Query 014769
Match_columns 419
No_of_seqs 191 out of 2311
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 08:20:36 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014769.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014769hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0259 Tyrosine aminotransfer 100.0 7.9E-68 1.7E-72 459.7 42.4 409 9-417 28-436 (447)
2 PLN00145 tyrosine/nicotianamin 100.0 6.6E-63 1.4E-67 471.7 47.7 413 6-418 14-428 (430)
3 PLN02187 rooty/superroot1 100.0 4.4E-62 9.6E-67 468.8 47.1 415 1-418 25-442 (462)
4 COG0436 Aspartate/tyrosine/aro 100.0 1.2E-61 2.5E-66 453.8 43.8 378 20-415 6-392 (393)
5 PLN02656 tyrosine transaminase 100.0 2.1E-59 4.6E-64 446.6 46.5 394 25-418 13-407 (409)
6 PLN00143 tyrosine/nicotianamin 100.0 9.6E-59 2.1E-63 441.8 46.3 394 25-418 15-408 (409)
7 PTZ00433 tyrosine aminotransfe 100.0 4.8E-55 1E-59 417.4 45.3 376 39-417 30-411 (412)
8 PRK13355 bifunctional HTH-doma 100.0 4E-55 8.6E-60 428.1 44.8 399 8-416 114-516 (517)
9 TIGR01265 tyr_nico_aTase tyros 100.0 9.9E-55 2.1E-59 414.3 45.3 395 17-415 8-402 (403)
10 TIGR01264 tyr_amTase_E tyrosin 100.0 2.6E-54 5.7E-59 411.7 44.8 392 18-415 9-400 (401)
11 PRK06855 aminotransferase; Val 100.0 1.2E-53 2.6E-58 409.1 43.4 375 39-416 29-431 (433)
12 PLN00175 aminotransferase fami 100.0 1.5E-53 3.3E-58 405.9 42.9 353 41-414 53-413 (413)
13 PRK06207 aspartate aminotransf 100.0 2.2E-53 4.7E-58 404.5 43.9 359 41-416 38-404 (405)
14 PRK07366 succinyldiaminopimela 100.0 4.8E-53 1E-57 401.5 42.2 356 39-412 27-388 (388)
15 PRK08960 hypothetical protein; 100.0 1.5E-52 3.1E-57 397.8 44.3 376 15-413 7-386 (387)
16 PRK07681 aspartate aminotransf 100.0 1.2E-52 2.5E-57 399.8 43.5 373 15-410 7-384 (399)
17 PRK08068 transaminase; Reviewe 100.0 1.5E-52 3.3E-57 397.9 43.5 376 14-411 6-386 (389)
18 PTZ00377 alanine aminotransfer 100.0 1.3E-52 2.9E-57 407.1 42.0 399 13-418 10-479 (481)
19 PRK06348 aspartate aminotransf 100.0 2.7E-52 5.9E-57 395.3 43.1 371 15-411 8-382 (384)
20 PRK09147 succinyldiaminopimela 100.0 3.9E-52 8.5E-57 396.1 42.1 369 18-413 6-395 (396)
21 PRK08636 aspartate aminotransf 100.0 1.1E-51 2.4E-56 393.4 44.6 377 20-415 13-401 (403)
22 PRK06107 aspartate aminotransf 100.0 8.5E-52 1.9E-56 394.0 43.7 360 41-415 32-401 (402)
23 TIGR03540 DapC_direct LL-diami 100.0 9.6E-52 2.1E-56 392.1 43.6 351 40-410 27-382 (383)
24 PRK09276 LL-diaminopimelate am 100.0 1.7E-51 3.6E-56 390.7 43.6 351 40-410 29-384 (385)
25 PRK05942 aspartate aminotransf 100.0 2E-51 4.4E-56 390.6 43.2 353 40-412 33-390 (394)
26 PRK09148 aminotransferase; Val 100.0 2.8E-51 6.2E-56 390.2 43.9 360 40-416 28-392 (405)
27 PRK08361 aspartate aminotransf 100.0 1.3E-51 2.8E-56 391.8 41.3 383 7-414 4-390 (391)
28 PRK07337 aminotransferase; Val 100.0 3.5E-51 7.6E-56 388.7 43.5 378 16-412 6-387 (388)
29 PRK09265 aminotransferase AlaT 100.0 8.5E-51 1.9E-55 387.7 45.2 393 15-416 8-403 (404)
30 PRK07682 hypothetical protein; 100.0 3.5E-51 7.5E-56 387.6 40.7 353 42-415 20-377 (378)
31 PRK06108 aspartate aminotransf 100.0 9.3E-51 2E-55 385.9 43.2 353 41-413 23-381 (382)
32 KOG0257 Kynurenine aminotransf 100.0 3.7E-52 8.1E-57 368.7 30.4 349 47-409 36-414 (420)
33 PRK07324 transaminase; Validat 100.0 2.7E-51 5.9E-56 386.2 37.1 347 40-415 24-371 (373)
34 PLN02231 alanine transaminase 100.0 6.2E-51 1.3E-55 395.2 40.3 383 17-418 111-531 (534)
35 PRK06290 aspartate aminotransf 100.0 2.1E-50 4.5E-55 383.3 43.1 358 39-416 41-407 (410)
36 TIGR03538 DapC_gpp succinyldia 100.0 1.3E-50 2.7E-55 385.3 41.2 347 39-411 25-392 (393)
37 PRK08363 alanine aminotransfer 100.0 2.8E-50 6E-55 383.6 43.5 364 39-416 27-396 (398)
38 PRK07683 aminotransferase A; V 100.0 5.2E-50 1.1E-54 379.8 44.3 375 15-417 7-386 (387)
39 PRK07590 L,L-diaminopimelate a 100.0 1.4E-50 2.9E-55 386.6 40.3 347 40-412 32-409 (409)
40 PRK05764 aspartate aminotransf 100.0 6E-50 1.3E-54 381.5 44.3 385 14-415 5-392 (393)
41 PRK12414 putative aminotransfe 100.0 3.7E-50 8E-55 380.5 42.0 349 41-410 28-383 (384)
42 PRK08912 hypothetical protein; 100.0 4.9E-50 1.1E-54 380.7 42.4 355 41-414 25-386 (387)
43 PRK05957 aspartate aminotransf 100.0 1.2E-49 2.6E-54 377.6 44.9 357 41-417 26-388 (389)
44 PRK07568 aspartate aminotransf 100.0 1.5E-49 3.3E-54 379.2 45.1 379 17-419 7-397 (397)
45 PRK07550 hypothetical protein; 100.0 1E-49 2.2E-54 378.4 42.9 377 14-411 3-384 (386)
46 PRK07309 aromatic amino acid a 100.0 2.1E-49 4.6E-54 376.2 43.7 375 15-416 9-390 (391)
47 PLN02450 1-aminocyclopropane-1 100.0 4.1E-50 8.8E-55 386.6 38.0 361 41-416 37-432 (468)
48 COG1168 MalY Bifunctional PLP- 100.0 1E-49 2.2E-54 349.8 36.9 355 41-415 24-387 (388)
49 PRK05839 hypothetical protein; 100.0 1.8E-49 4E-54 374.1 40.4 347 32-413 14-373 (374)
50 PLN02607 1-aminocyclopropane-1 100.0 1.1E-49 2.4E-54 380.5 38.7 362 41-417 46-440 (447)
51 PRK09082 methionine aminotrans 100.0 2.1E-49 4.5E-54 375.8 39.8 350 41-410 29-385 (386)
52 PRK07777 aminotransferase; Val 100.0 5.4E-49 1.2E-53 373.6 42.7 354 41-413 23-385 (387)
53 PLN02376 1-aminocyclopropane-1 100.0 1.8E-49 3.9E-54 383.0 39.6 386 19-416 21-440 (496)
54 COG1167 ARO8 Transcriptional r 100.0 3.4E-49 7.3E-54 378.1 39.2 356 42-417 89-458 (459)
55 TIGR03537 DapC succinyldiamino 100.0 5.7E-49 1.2E-53 368.2 39.4 341 44-410 2-349 (350)
56 PRK08175 aminotransferase; Val 100.0 1.6E-48 3.5E-53 370.9 42.0 356 40-415 27-390 (395)
57 PRK09275 aspartate aminotransf 100.0 9E-49 2E-53 374.5 37.6 382 19-417 70-520 (527)
58 TIGR03542 DAPAT_plant LL-diami 100.0 6.6E-48 1.4E-52 367.3 40.2 344 40-411 31-401 (402)
59 PRK06836 aspartate aminotransf 100.0 1.1E-46 2.5E-51 357.8 43.1 353 40-416 31-393 (394)
60 PRK09257 aromatic amino acid a 100.0 5.8E-48 1.3E-52 367.2 32.7 369 19-412 7-396 (396)
61 PRK15481 transcriptional regul 100.0 2.1E-47 4.5E-52 367.2 36.8 339 41-413 84-430 (431)
62 TIGR03801 asp_4_decarbox aspar 100.0 6.5E-47 1.4E-51 361.2 37.9 383 19-418 64-520 (521)
63 PTZ00376 aspartate aminotransf 100.0 2.4E-47 5.3E-52 363.4 34.2 370 19-413 10-402 (404)
64 PRK07865 N-succinyldiaminopime 100.0 1.9E-46 4.1E-51 353.3 39.3 331 40-409 25-363 (364)
65 PF00155 Aminotran_1_2: Aminot 100.0 6.5E-48 1.4E-52 364.1 27.9 349 43-408 2-363 (363)
66 PLN02368 alanine transaminase 100.0 3.3E-47 7.2E-52 358.8 31.6 333 12-353 10-396 (407)
67 PRK06225 aspartate aminotransf 100.0 9.1E-46 2E-50 350.6 41.3 349 41-417 27-379 (380)
68 PRK14809 histidinol-phosphate 100.0 3.1E-46 6.8E-51 350.8 36.4 328 41-413 29-356 (357)
69 PRK09440 avtA valine--pyruvate 100.0 9E-46 2E-50 354.9 38.8 372 23-418 14-415 (416)
70 PLN02672 methionine S-methyltr 100.0 7.5E-46 1.6E-50 374.4 39.0 357 38-413 693-1079(1082)
71 TIGR03539 DapC_actino succinyl 100.0 2.1E-45 4.7E-50 344.7 39.6 331 39-408 18-356 (357)
72 PRK06358 threonine-phosphate d 100.0 1.8E-45 4E-50 344.4 38.5 334 41-412 18-353 (354)
73 PRK01533 histidinol-phosphate 100.0 3.4E-46 7.3E-51 349.8 32.4 329 41-415 28-356 (366)
74 PRK02610 histidinol-phosphate 100.0 1.3E-45 2.7E-50 348.3 36.0 336 43-415 29-372 (374)
75 PRK03158 histidinol-phosphate 100.0 9.4E-46 2E-50 348.2 32.4 331 41-411 28-358 (359)
76 PLN02397 aspartate transaminas 100.0 3.8E-45 8.3E-50 349.0 36.1 367 19-413 29-420 (423)
77 PRK07392 threonine-phosphate d 100.0 1.4E-44 3.1E-49 339.7 36.1 331 40-409 20-357 (360)
78 PRK08056 threonine-phosphate d 100.0 1.8E-44 3.8E-49 338.4 36.1 335 40-413 18-354 (356)
79 PRK05166 histidinol-phosphate 100.0 2.6E-44 5.6E-49 339.2 34.8 333 41-411 35-368 (371)
80 COG0079 HisC Histidinol-phosph 100.0 4.5E-44 9.8E-49 329.1 34.7 331 42-414 22-354 (356)
81 PRK08637 hypothetical protein; 100.0 9.4E-44 2E-48 337.2 36.8 358 42-415 3-387 (388)
82 PLN03026 histidinol-phosphate 100.0 4.8E-44 1E-48 337.5 34.6 327 41-410 51-378 (380)
83 PRK03317 histidinol-phosphate 100.0 6.7E-44 1.4E-48 336.4 34.0 335 43-414 27-364 (368)
84 PRK04870 histidinol-phosphate 100.0 5.1E-44 1.1E-48 335.8 32.8 327 41-411 25-355 (356)
85 PRK02731 histidinol-phosphate 100.0 2.5E-43 5.5E-48 332.8 35.4 336 40-413 30-365 (367)
86 PRK08153 histidinol-phosphate 100.0 4.6E-43 1E-47 330.0 36.4 336 41-417 30-368 (369)
87 PRK05387 histidinol-phosphate 100.0 2.1E-43 4.5E-48 331.8 33.7 328 41-413 23-352 (353)
88 PRK09105 putative aminotransfe 100.0 7.5E-43 1.6E-47 328.0 34.8 324 42-412 43-368 (370)
89 PRK14807 histidinol-phosphate 100.0 1.3E-42 2.8E-47 325.1 36.2 327 41-411 21-349 (351)
90 PRK07908 hypothetical protein; 100.0 1.2E-41 2.7E-46 318.7 36.5 324 41-413 21-346 (349)
91 KOG0256 1-aminocyclopropane-1- 100.0 4.1E-42 9E-47 302.1 30.7 329 77-415 114-462 (471)
92 PRK01688 histidinol-phosphate 100.0 1E-42 2.2E-47 325.5 28.7 321 42-408 28-350 (351)
93 TIGR01141 hisC histidinol-phos 100.0 3.1E-42 6.7E-47 322.9 32.0 327 41-408 18-345 (346)
94 PRK04781 histidinol-phosphate 100.0 4.3E-42 9.3E-47 322.6 32.5 304 77-411 53-360 (364)
95 PRK03321 putative aminotransfe 100.0 2.2E-41 4.7E-46 317.7 31.1 329 42-413 22-350 (352)
96 PRK00950 histidinol-phosphate 100.0 5.2E-41 1.1E-45 316.5 33.1 325 41-412 33-360 (361)
97 KOG0634 Aromatic amino acid am 100.0 6.7E-41 1.5E-45 296.9 30.1 393 7-417 6-469 (472)
98 PRK04635 histidinol-phosphate 100.0 3.7E-41 8E-46 315.7 29.7 321 41-410 30-351 (354)
99 PRK14808 histidinol-phosphate 100.0 1.3E-40 2.9E-45 308.7 32.7 317 40-410 17-333 (335)
100 PRK06425 histidinol-phosphate 100.0 1.3E-40 2.7E-45 309.1 32.0 295 77-412 34-331 (332)
101 PRK03967 histidinol-phosphate 100.0 4.2E-40 9.2E-45 306.1 33.4 318 41-414 17-334 (337)
102 PRK05664 threonine-phosphate d 100.0 1.3E-39 2.8E-44 301.9 35.3 308 42-414 20-328 (330)
103 TIGR01140 L_thr_O3P_dcar L-thr 100.0 8.5E-40 1.8E-44 303.3 32.9 312 40-408 15-329 (330)
104 PRK06959 putative threonine-ph 100.0 1.9E-39 4.2E-44 301.2 34.3 310 42-416 24-335 (339)
105 PRK08354 putative aminotransfe 100.0 1.9E-38 4.1E-43 291.8 35.5 301 41-408 7-309 (311)
106 cd00609 AAT_like Aspartate ami 100.0 3.5E-36 7.5E-41 282.9 39.6 346 45-409 1-349 (350)
107 COG3977 Alanine-alpha-ketoisov 100.0 2.2E-36 4.7E-41 255.5 32.6 370 20-416 11-413 (417)
108 KOG0258 Alanine aminotransfera 100.0 1.2E-36 2.5E-41 265.8 29.7 335 75-418 104-473 (475)
109 PRK13238 tnaA tryptophanase/L- 100.0 7.3E-35 1.6E-39 278.3 33.2 344 40-413 34-432 (460)
110 COG1448 TyrB Aspartate/tyrosin 100.0 1.7E-33 3.7E-38 247.8 27.4 368 17-411 5-395 (396)
111 PLN02822 serine palmitoyltrans 100.0 9.4E-33 2E-37 266.3 31.9 349 40-417 107-480 (481)
112 TIGR03576 pyridox_MJ0158 pyrid 100.0 2.8E-32 6.1E-37 252.4 32.2 306 57-412 31-345 (346)
113 TIGR03392 FeS_syn_CsdA cystein 100.0 2.9E-31 6.2E-36 253.2 35.1 333 42-415 15-396 (398)
114 PRK10874 cysteine sulfinate de 100.0 4.8E-31 1E-35 252.0 35.8 333 42-415 18-399 (401)
115 TIGR01822 2am3keto_CoA 2-amino 100.0 6.5E-31 1.4E-35 250.7 35.5 331 40-415 36-390 (393)
116 TIGR00858 bioF 8-amino-7-oxono 100.0 6.4E-31 1.4E-35 248.1 33.5 327 40-409 14-360 (360)
117 PRK06939 2-amino-3-ketobutyrat 100.0 1E-30 2.2E-35 250.0 34.5 337 40-415 40-394 (397)
118 cd00617 Tnase_like Tryptophana 100.0 1.7E-30 3.7E-35 244.7 32.2 346 40-414 9-408 (431)
119 TIGR01825 gly_Cac_T_rel pyrido 100.0 6.6E-30 1.4E-34 243.2 35.2 335 40-415 31-382 (385)
120 PRK02627 acetylornithine amino 100.0 2.9E-30 6.4E-35 246.4 32.8 342 39-415 36-395 (396)
121 PRK05958 8-amino-7-oxononanoat 100.0 2.7E-30 5.8E-35 246.1 32.3 334 40-412 37-385 (385)
122 TIGR01979 sufS cysteine desulf 100.0 8.6E-30 1.9E-34 243.7 34.8 334 41-415 16-402 (403)
123 PRK09295 bifunctional cysteine 100.0 1E-29 2.2E-34 243.0 34.3 330 42-413 22-403 (406)
124 PLN02855 Bifunctional selenocy 100.0 1E-29 2.2E-34 244.3 33.1 337 41-416 30-420 (424)
125 cd06451 AGAT_like Alanine-glyo 100.0 8.3E-30 1.8E-34 239.9 30.7 320 58-413 8-356 (356)
126 PRK13392 5-aminolevulinate syn 100.0 1.3E-29 2.8E-34 242.4 32.4 333 41-415 45-398 (410)
127 KOG0633 Histidinol phosphate a 100.0 2.3E-30 5.1E-35 214.8 21.8 332 40-411 39-374 (375)
128 PRK10534 L-threonine aldolase; 100.0 6E-30 1.3E-34 238.4 27.0 315 44-413 1-332 (333)
129 TIGR00707 argD acetylornithine 100.0 3.2E-29 7E-34 237.9 30.6 334 39-412 24-379 (379)
130 PRK01278 argD acetylornithine 100.0 5.8E-29 1.3E-33 236.4 32.4 340 38-414 27-388 (389)
131 PLN02483 serine palmitoyltrans 100.0 2E-28 4.4E-33 236.7 34.1 335 41-415 99-467 (489)
132 PRK07179 hypothetical protein; 100.0 2.8E-28 6.1E-33 233.0 34.4 332 40-415 52-399 (407)
133 TIGR02539 SepCysS Sep-tRNA:Cys 100.0 2.2E-28 4.7E-33 230.5 33.1 295 86-415 53-369 (370)
134 TIGR01976 am_tr_V_VC1184 cyste 100.0 2E-28 4.4E-33 233.8 32.4 325 44-408 18-397 (397)
135 cd00378 SHMT Serine-glycine hy 100.0 4.3E-28 9.3E-33 231.9 34.1 340 41-414 18-385 (402)
136 TIGR01821 5aminolev_synth 5-am 100.0 3.7E-28 8E-33 231.9 33.3 333 41-415 44-397 (402)
137 PRK03244 argD acetylornithine 100.0 1E-28 2.2E-33 235.6 29.3 342 39-416 40-396 (398)
138 cd06502 TA_like Low-specificit 100.0 1.2E-28 2.6E-33 230.5 29.0 312 58-410 8-337 (338)
139 PLN02721 threonine aldolase 100.0 2.1E-28 4.5E-33 230.3 30.4 330 43-414 6-352 (353)
140 PRK09064 5-aminolevulinate syn 100.0 6.8E-28 1.5E-32 230.6 33.6 333 41-415 45-398 (407)
141 PRK02948 cysteine desulfurase; 100.0 1.5E-28 3.2E-33 233.3 28.4 334 45-416 2-376 (381)
142 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 8.7E-28 1.9E-32 226.1 33.3 322 58-412 11-360 (361)
143 cd06454 KBL_like KBL_like; thi 100.0 1.2E-27 2.5E-32 224.9 33.2 327 43-411 2-348 (349)
144 COG0520 csdA Selenocysteine ly 100.0 3E-27 6.5E-32 221.3 34.4 334 41-413 20-404 (405)
145 PLN02409 serine--glyoxylate am 100.0 1.4E-27 3E-32 227.1 32.6 325 59-415 19-373 (401)
146 cd06453 SufS_like Cysteine des 100.0 8.5E-28 1.8E-32 227.7 30.1 315 59-408 10-373 (373)
147 TIGR03403 nifS_epsilon cystein 100.0 1.9E-27 4.2E-32 225.7 32.3 330 59-416 10-377 (382)
148 TIGR03402 FeS_nifS cysteine de 100.0 2.1E-27 4.6E-32 225.2 31.7 324 59-416 10-374 (379)
149 TIGR03301 PhnW-AepZ 2-aminoeth 100.0 2.6E-27 5.6E-32 223.1 31.0 318 58-412 8-355 (355)
150 TIGR01977 am_tr_V_EF2568 cyste 100.0 2.5E-27 5.4E-32 224.8 30.4 327 58-410 10-375 (376)
151 COG1104 NifS Cysteine sulfinat 100.0 4.1E-27 8.8E-32 211.9 28.8 330 58-417 11-380 (386)
152 PRK07049 methionine gamma-lyas 100.0 6.6E-27 1.4E-31 222.4 31.9 230 77-342 77-320 (427)
153 PRK02936 argD acetylornithine 100.0 7.1E-27 1.5E-31 221.4 31.9 338 39-412 26-377 (377)
154 PRK13393 5-aminolevulinate syn 100.0 1.5E-26 3.3E-31 220.9 33.8 333 41-415 44-397 (406)
155 TIGR02326 transamin_PhnW 2-ami 100.0 1.4E-26 3.1E-31 218.3 31.6 316 59-413 13-361 (363)
156 cd00613 GDC-P Glycine cleavage 100.0 1.8E-26 3.9E-31 220.5 32.4 330 41-408 19-398 (398)
157 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 3.4E-26 7.4E-31 216.7 32.7 338 41-415 17-382 (387)
158 cd00610 OAT_like Acetyl ornith 100.0 1.3E-26 2.7E-31 222.8 29.2 348 39-412 33-413 (413)
159 PRK05093 argD bifunctional N-s 100.0 2.9E-26 6.3E-31 218.6 31.4 337 39-415 37-401 (403)
160 PRK13520 L-tyrosine decarboxyl 100.0 1.3E-25 2.8E-30 212.7 35.2 323 58-413 30-370 (371)
161 PRK04073 rocD ornithine--oxo-a 100.0 3.2E-26 6.9E-31 217.8 30.6 338 37-412 35-395 (396)
162 PRK06234 methionine gamma-lyas 100.0 2.8E-26 6.1E-31 217.1 29.5 287 82-414 62-397 (400)
163 PRK13479 2-aminoethylphosphona 100.0 8.9E-26 1.9E-30 213.3 31.9 323 58-415 14-364 (368)
164 PF12897 Aminotran_MocR: Alani 100.0 4.7E-26 1E-30 201.2 27.2 312 77-413 61-414 (425)
165 cd06450 DOPA_deC_like DOPA dec 100.0 1.2E-26 2.7E-31 217.5 25.2 309 61-410 12-344 (345)
166 TIGR02006 IscS cysteine desulf 100.0 2.4E-25 5.3E-30 212.3 32.5 335 45-415 5-378 (402)
167 PRK12381 bifunctional succinyl 100.0 2.1E-25 4.6E-30 212.4 31.1 346 38-418 35-403 (406)
168 TIGR01437 selA_rel uncharacter 100.0 1.3E-25 2.9E-30 210.1 28.9 324 41-412 7-363 (363)
169 TIGR03812 tyr_de_CO2_Arch tyro 100.0 7.8E-25 1.7E-29 207.5 34.4 314 61-410 33-372 (373)
170 TIGR00713 hemL glutamate-1-sem 100.0 8.6E-26 1.9E-30 216.9 27.7 348 36-414 42-422 (423)
171 PRK08247 cystathionine gamma-s 99.9 2.3E-25 5E-30 208.9 29.5 290 77-414 46-364 (366)
172 PRK00451 glycine dehydrogenase 99.9 4.7E-25 1E-29 213.4 32.0 326 43-412 69-446 (447)
173 PLN02242 methionine gamma-lyas 99.9 2E-25 4.4E-30 211.4 28.4 215 84-337 76-300 (418)
174 PRK14012 cysteine desulfurase; 99.9 1E-24 2.2E-29 208.3 31.8 334 45-415 5-380 (404)
175 PRK06767 methionine gamma-lyas 99.9 6.8E-25 1.5E-29 207.0 30.1 290 77-413 55-384 (386)
176 PRK08088 4-aminobutyrate amino 99.9 8E-25 1.7E-29 209.5 30.5 354 38-414 37-423 (425)
177 COG0156 BioF 7-keto-8-aminopel 99.9 1.6E-24 3.4E-29 199.0 30.9 328 41-411 38-387 (388)
178 PRK07504 O-succinylhomoserine 99.9 3.1E-24 6.8E-29 202.8 32.4 223 77-337 59-286 (398)
179 PRK08045 cystathionine gamma-s 99.9 1.6E-24 3.5E-29 203.6 29.9 295 76-416 45-384 (386)
180 PLN03227 serine palmitoyltrans 99.9 2E-24 4.2E-29 204.2 30.6 339 45-416 1-384 (392)
181 PRK08776 cystathionine gamma-s 99.9 3.8E-24 8.2E-29 202.1 32.5 222 77-337 54-281 (405)
182 TIGR02080 O_succ_thio_ly O-suc 99.9 2.2E-24 4.8E-29 202.5 30.4 227 77-342 45-277 (382)
183 PRK00011 glyA serine hydroxyme 99.9 4.6E-24 1E-28 204.8 32.9 339 41-414 24-389 (416)
184 PRK08133 O-succinylhomoserine 99.9 3.8E-24 8.3E-29 201.9 31.5 219 85-342 62-286 (390)
185 PRK00854 rocD ornithine--oxo-a 99.9 3.9E-24 8.4E-29 204.3 31.6 333 39-413 38-400 (401)
186 PRK08249 cystathionine gamma-s 99.9 2.9E-24 6.3E-29 202.6 30.2 219 79-337 60-284 (398)
187 PRK08861 cystathionine gamma-s 99.9 4.3E-24 9.4E-29 199.9 30.9 295 77-417 47-386 (388)
188 PRK04260 acetylornithine amino 99.9 8.1E-24 1.7E-28 200.1 32.2 335 39-411 26-374 (375)
189 PRK06460 hypothetical protein; 99.9 4.7E-24 1E-28 200.3 30.2 221 83-342 44-270 (376)
190 KOG1411 Aspartate aminotransfe 99.9 8.1E-26 1.8E-30 195.1 16.6 376 11-412 25-423 (427)
191 PTZ00125 ornithine aminotransf 99.9 1.2E-23 2.5E-28 201.1 32.7 348 39-419 28-400 (400)
192 PRK07810 O-succinylhomoserine 99.9 3.2E-24 6.9E-29 202.7 28.2 227 77-342 64-296 (403)
193 PLN02651 cysteine desulfurase 99.9 5.8E-24 1.3E-28 200.3 29.5 314 59-402 10-364 (364)
194 cd00614 CGS_like CGS_like: Cys 99.9 1.1E-23 2.5E-28 198.0 31.2 222 83-342 39-266 (369)
195 PLN00144 acetylornithine trans 99.9 8.3E-24 1.8E-28 199.2 30.0 342 39-415 12-381 (382)
196 PRK07503 methionine gamma-lyas 99.9 1.2E-23 2.7E-28 199.1 31.1 221 77-337 59-287 (403)
197 TIGR01325 O_suc_HS_sulf O-succ 99.9 8.5E-24 1.8E-28 199.2 29.4 223 77-339 48-276 (380)
198 TIGR01328 met_gam_lyase methio 99.9 1E-23 2.2E-28 198.9 29.8 226 77-342 53-286 (391)
199 TIGR03235 DNA_S_dndA cysteine 99.9 1.1E-24 2.4E-29 204.6 22.8 316 59-404 9-348 (353)
200 PRK04366 glycine dehydrogenase 99.9 6.4E-23 1.4E-27 198.5 35.4 340 47-416 73-450 (481)
201 PRK07811 cystathionine gamma-s 99.9 2.1E-23 4.6E-28 196.7 30.4 221 84-342 61-287 (388)
202 PRK07505 hypothetical protein; 99.9 3.6E-23 7.8E-28 197.4 32.4 333 39-415 43-400 (402)
203 PRK07582 cystathionine gamma-l 99.9 1.7E-23 3.7E-28 196.0 29.3 282 77-414 45-365 (366)
204 KOG1412 Aspartate aminotransfe 99.9 1E-23 2.2E-28 179.8 24.6 377 17-416 9-407 (410)
205 TIGR03246 arg_catab_astC succi 99.9 4.6E-23 1E-27 195.8 32.1 344 38-415 31-396 (397)
206 PRK09028 cystathionine beta-ly 99.9 3.8E-23 8.3E-28 193.3 30.6 244 58-342 35-286 (394)
207 PF00266 Aminotran_5: Aminotra 99.9 1E-22 2.2E-27 192.5 33.0 311 59-404 10-371 (371)
208 PLN02955 8-amino-7-oxononanoat 99.9 3.1E-22 6.6E-27 188.1 35.3 348 19-415 67-462 (476)
209 PRK08574 cystathionine gamma-s 99.9 2.9E-23 6.2E-28 195.3 28.6 219 79-337 49-273 (385)
210 TIGR00700 GABAtrnsam 4-aminobu 99.9 9.3E-23 2E-27 194.9 31.2 353 38-413 29-419 (420)
211 PRK06918 4-aminobutyrate amino 99.9 2E-22 4.4E-27 194.0 33.4 355 38-416 50-445 (451)
212 PRK07050 cystathionine beta-ly 99.9 7.1E-23 1.5E-27 193.2 29.3 295 77-415 59-392 (394)
213 PRK05937 8-amino-7-oxononanoat 99.9 2.8E-22 6E-27 189.0 32.7 328 41-418 3-354 (370)
214 PRK05968 hypothetical protein; 99.9 1.2E-22 2.6E-27 191.7 29.8 290 77-415 57-387 (389)
215 PRK06777 4-aminobutyrate amino 99.9 1.4E-22 3E-27 193.2 30.5 349 38-413 36-420 (421)
216 PRK09792 4-aminobutyrate trans 99.9 3.7E-22 8E-27 190.3 33.3 353 36-413 34-420 (421)
217 COG0075 Serine-pyruvate aminot 99.9 4.8E-22 1E-26 180.8 32.1 333 58-416 14-365 (383)
218 COG4992 ArgD Ornithine/acetylo 99.9 1.7E-22 3.6E-27 181.9 28.7 345 37-418 37-402 (404)
219 KOG1549 Cysteine desulfurase N 99.9 9E-23 1.9E-27 184.5 27.0 205 39-268 39-257 (428)
220 PRK04612 argD acetylornithine 99.9 7.3E-22 1.6E-26 187.0 33.5 349 38-419 36-408 (408)
221 PRK07269 cystathionine gamma-s 99.9 1.1E-22 2.4E-27 189.6 26.0 291 77-413 48-363 (364)
222 PRK08248 O-acetylhomoserine am 99.9 6.6E-22 1.4E-26 188.0 31.6 227 85-342 65-322 (431)
223 TIGR01329 cysta_beta_ly_E cyst 99.9 3.2E-22 7E-27 188.0 28.8 282 86-414 49-375 (378)
224 PRK06702 O-acetylhomoserine am 99.9 4.6E-22 1E-26 187.5 29.5 228 85-342 62-319 (432)
225 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.7E-21 3.7E-26 182.8 32.5 309 61-412 10-375 (376)
226 TIGR01326 OAH_OAS_sulfhy OAH/O 99.9 6.2E-22 1.3E-26 188.6 29.9 165 77-268 51-219 (418)
227 PRK00062 glutamate-1-semialdeh 99.9 2.8E-22 6.1E-27 191.8 27.1 348 38-415 46-425 (426)
228 PLN02624 ornithine-delta-amino 99.9 1.1E-21 2.4E-26 189.4 30.8 345 39-415 72-445 (474)
229 PRK06084 O-acetylhomoserine am 99.9 8.2E-22 1.8E-26 187.2 28.7 293 85-415 59-423 (425)
230 PRK08360 4-aminobutyrate amino 99.9 4.8E-21 1.1E-25 183.2 33.1 354 36-417 35-429 (443)
231 TIGR01324 cysta_beta_ly_B cyst 99.9 1.4E-21 3.1E-26 182.9 28.8 289 79-413 43-375 (377)
232 PRK05939 hypothetical protein; 99.9 1.8E-21 3.9E-26 183.5 29.2 225 87-342 50-293 (397)
233 PRK11658 UDP-4-amino-4-deoxy-L 99.9 8.2E-21 1.8E-25 179.2 33.7 312 62-413 14-378 (379)
234 TIGR01885 Orn_aminotrans ornit 99.9 2.6E-21 5.6E-26 184.6 30.6 334 39-412 34-400 (401)
235 TIGR01814 kynureninase kynuren 99.9 3.6E-21 7.7E-26 183.9 31.5 333 42-412 26-405 (406)
236 cd00616 AHBA_syn 3-amino-5-hyd 99.9 7.1E-21 1.5E-25 179.0 32.6 302 66-409 3-352 (352)
237 PRK06058 4-aminobutyrate amino 99.9 6.2E-21 1.4E-25 183.1 32.3 351 38-414 52-442 (443)
238 PRK08117 4-aminobutyrate amino 99.9 5.5E-21 1.2E-25 183.6 31.9 355 38-417 39-432 (433)
239 PRK08064 cystathionine beta-ly 99.9 6.3E-21 1.4E-25 180.0 31.2 214 85-336 55-273 (390)
240 COG2008 GLY1 Threonine aldolas 99.9 3E-21 6.4E-26 170.4 25.4 327 45-412 2-341 (342)
241 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2.9E-20 6.3E-25 175.4 34.0 310 62-412 11-374 (375)
242 PRK07671 cystathionine beta-ly 99.9 3.9E-21 8.5E-26 180.5 27.8 226 77-342 44-275 (377)
243 COG0160 GabT 4-aminobutyrate a 99.9 1.8E-20 4E-25 173.9 31.7 353 38-415 52-446 (447)
244 PRK07495 4-aminobutyrate amino 99.9 1.5E-20 3.3E-25 179.0 32.0 354 36-416 34-423 (425)
245 PLN02509 cystathionine beta-ly 99.9 8.4E-21 1.8E-25 180.6 29.0 228 78-342 125-358 (464)
246 PRK06176 cystathionine gamma-s 99.9 6.4E-21 1.4E-25 179.1 27.6 221 77-337 44-270 (380)
247 PRK08134 O-acetylhomoserine am 99.9 2.2E-20 4.7E-25 177.6 30.7 157 85-267 65-225 (433)
248 PRK05994 O-acetylhomoserine am 99.9 2.2E-20 4.8E-25 178.0 30.5 224 85-339 64-318 (427)
249 PRK13580 serine hydroxymethylt 99.9 8.9E-20 1.9E-24 171.7 33.5 356 22-414 34-445 (493)
250 PRK05967 cystathionine beta-ly 99.9 1.2E-20 2.6E-25 176.1 27.4 203 109-342 81-289 (395)
251 PRK05964 adenosylmethionine--8 99.9 2.4E-20 5.2E-25 178.6 29.3 352 36-415 36-423 (423)
252 PRK13034 serine hydroxymethylt 99.9 2.1E-19 4.6E-24 171.2 35.4 351 19-414 10-392 (416)
253 PRK09264 diaminobutyrate--2-ox 99.9 1.2E-19 2.6E-24 173.5 33.4 352 38-417 35-419 (425)
254 TIGR02407 ectoine_ectB diamino 99.9 9.6E-20 2.1E-24 173.3 32.3 352 38-414 31-412 (412)
255 TIGR03588 PseC UDP-4-keto-6-de 99.9 3.2E-19 7E-24 169.0 35.1 309 61-412 9-380 (380)
256 PRK07812 O-acetylhomoserine am 99.9 5.3E-20 1.1E-24 174.7 29.7 228 85-342 70-326 (436)
257 PRK03715 argD acetylornithine 99.9 2.1E-19 4.5E-24 169.9 32.6 340 39-415 33-394 (395)
258 TIGR00709 dat 2,4-diaminobutyr 99.9 3.8E-19 8.3E-24 170.6 31.2 355 36-417 33-438 (442)
259 TIGR01788 Glu-decarb-GAD gluta 99.9 6.6E-19 1.4E-23 166.8 32.2 339 59-415 52-430 (431)
260 PTZ00094 serine hydroxymethylt 99.9 4.9E-19 1.1E-23 170.8 31.8 339 41-415 33-409 (452)
261 PF01053 Cys_Met_Meta_PP: Cys/ 99.9 3.3E-19 7.1E-24 166.0 29.1 280 86-413 57-386 (386)
262 PRK15407 lipopolysaccharide bi 99.9 2.6E-18 5.6E-23 164.1 35.8 332 44-413 25-435 (438)
263 PRK06541 hypothetical protein; 99.9 1.3E-18 2.9E-23 167.1 33.0 359 36-418 46-459 (460)
264 cd00615 Orn_deC_like Ornithine 99.9 1.9E-20 4.2E-25 170.7 19.4 223 86-331 61-293 (294)
265 COG0001 HemL Glutamate-1-semia 99.9 1.2E-18 2.5E-23 158.9 30.3 351 38-417 49-431 (432)
266 PRK08114 cystathionine beta-ly 99.9 6.8E-19 1.5E-23 164.2 29.3 219 85-342 63-289 (395)
267 TIGR01364 serC_1 phosphoserine 99.9 8.3E-19 1.8E-23 162.9 29.5 316 60-414 3-348 (349)
268 cd00611 PSAT_like Phosphoserin 99.9 2.7E-19 5.8E-24 167.5 26.4 311 58-411 8-353 (355)
269 PRK03080 phosphoserine aminotr 99.9 2.1E-19 4.6E-24 169.5 25.5 326 44-416 13-375 (378)
270 TIGR03372 putres_am_tran putre 99.9 1.8E-18 4E-23 164.5 30.2 341 39-412 72-442 (442)
271 COG0399 WecE Predicted pyridox 99.8 8.1E-18 1.8E-22 153.6 32.9 312 60-414 13-373 (374)
272 PRK05769 4-aminobutyrate amino 99.8 1.2E-17 2.6E-22 160.0 35.3 351 39-415 51-440 (441)
273 PRK02769 histidine decarboxyla 99.8 1.7E-17 3.6E-22 155.3 35.2 289 86-414 63-372 (380)
274 PRK05613 O-acetylhomoserine am 99.8 3.6E-18 7.8E-23 162.3 31.0 225 85-339 70-328 (437)
275 PRK08593 4-aminobutyrate amino 99.8 7.3E-18 1.6E-22 161.6 32.6 353 38-418 38-433 (445)
276 PRK11522 putrescine--2-oxoglut 99.8 4.1E-18 8.9E-23 163.3 30.7 348 38-417 78-454 (459)
277 PLN02724 Molybdenum cofactor s 99.8 3E-18 6.6E-23 175.5 31.4 342 44-413 35-487 (805)
278 TIGR03531 selenium_SpcS O-phos 99.8 3.8E-18 8.3E-23 160.7 29.2 307 86-412 103-444 (444)
279 PLN02760 4-aminobutyrate:pyruv 99.8 1.1E-17 2.4E-22 161.8 32.8 351 38-416 85-493 (504)
280 PRK05355 3-phosphoserine/phosp 99.8 5.2E-18 1.1E-22 158.4 29.2 324 58-415 12-359 (360)
281 COG0626 MetC Cystathionine bet 99.8 1E-17 2.2E-22 153.9 29.2 285 84-414 63-394 (396)
282 PF01041 DegT_DnrJ_EryC1: DegT 99.8 6.3E-18 1.4E-22 158.9 28.0 307 61-409 4-363 (363)
283 KOG1360 5-aminolevulinate synt 99.8 9.9E-18 2.1E-22 148.1 27.0 322 57-415 183-525 (570)
284 PRK07482 hypothetical protein; 99.8 2.3E-17 5E-22 158.8 31.9 355 36-417 44-457 (461)
285 PRK07678 aminotransferase; Val 99.8 3.2E-17 7E-22 157.5 32.8 353 36-415 41-450 (451)
286 PRK05639 4-aminobutyrate amino 99.8 2.6E-17 5.6E-22 157.9 32.0 351 38-416 49-445 (457)
287 PLN02880 tyrosine decarboxylas 99.8 3.8E-17 8.2E-22 157.8 33.1 324 79-417 113-487 (490)
288 PRK07046 aminotransferase; Val 99.8 1.8E-17 3.9E-22 158.8 30.5 345 38-416 71-452 (453)
289 PLN03226 serine hydroxymethylt 99.8 4.2E-17 9E-22 156.7 33.0 362 21-414 18-419 (475)
290 PRK05965 hypothetical protein; 99.8 1.6E-17 3.4E-22 159.8 30.1 354 35-416 39-449 (459)
291 PRK06943 adenosylmethionine--8 99.8 1.5E-17 3.3E-22 159.5 29.9 352 36-416 48-448 (453)
292 PLN02590 probable tyrosine dec 99.8 6.3E-17 1.4E-21 156.2 34.1 327 78-418 160-536 (539)
293 PRK06434 cystathionine gamma-l 99.8 7.4E-18 1.6E-22 157.5 26.9 281 84-413 64-383 (384)
294 PLN02414 glycine dehydrogenase 99.8 1.4E-17 3.1E-22 169.6 31.1 308 83-416 563-909 (993)
295 KOG1368 Threonine aldolase [Am 99.8 5.2E-18 1.1E-22 144.4 23.1 328 43-413 22-368 (384)
296 PRK04013 argD acetylornithine/ 99.8 1.1E-17 2.3E-22 155.6 27.3 330 38-416 20-362 (364)
297 PRK13360 omega amino acid--pyr 99.8 5.9E-17 1.3E-21 155.1 32.6 352 38-415 42-441 (442)
298 PRK07986 adenosylmethionine--8 99.8 2E-17 4.3E-22 157.4 28.9 347 36-414 37-423 (428)
299 PLN02271 serine hydroxymethylt 99.8 9.5E-17 2.1E-21 151.9 33.0 335 60-413 160-539 (586)
300 PRK06082 4-aminobutyrate amino 99.8 5.2E-17 1.1E-21 156.1 31.7 350 39-418 69-455 (459)
301 PF04864 Alliinase_C: Allinase 99.8 3.4E-19 7.4E-24 156.0 15.1 288 86-411 45-362 (363)
302 PRK06105 aminotransferase; Pro 99.8 3.3E-17 7E-22 157.7 30.3 355 36-416 42-451 (460)
303 TIGR02618 tyr_phenol_ly tyrosi 99.8 7.3E-17 1.6E-21 150.0 31.3 321 62-414 50-426 (450)
304 PRK08742 adenosylmethionine--8 99.8 5.1E-17 1.1E-21 156.2 31.3 357 36-416 58-469 (472)
305 PRK06173 adenosylmethionine--8 99.8 2.8E-17 6E-22 156.6 29.0 348 36-416 38-427 (429)
306 PRK05630 adenosylmethionine--8 99.8 3E-17 6.5E-22 156.2 28.7 344 36-414 34-420 (422)
307 PRK09221 beta alanine--pyruvat 99.8 5.4E-17 1.2E-21 155.5 30.1 353 37-415 44-444 (445)
308 PRK06062 hypothetical protein; 99.8 6.9E-17 1.5E-21 155.0 30.7 351 36-416 47-447 (451)
309 PRK00615 glutamate-1-semialdeh 99.8 7.4E-17 1.6E-21 153.5 28.0 349 36-416 47-430 (433)
310 PRK07030 adenosylmethionine--8 99.8 1.2E-16 2.6E-21 153.7 29.7 351 36-415 41-447 (466)
311 cd01494 AAT_I Aspartate aminot 99.8 5E-18 1.1E-22 142.2 17.6 166 87-267 3-170 (170)
312 PRK06148 hypothetical protein; 99.8 1.7E-16 3.8E-21 165.6 32.8 348 39-416 621-1012(1013)
313 PRK07483 hypothetical protein; 99.8 1.9E-16 4.1E-21 151.7 30.6 355 38-416 26-439 (443)
314 PRK06149 hypothetical protein; 99.8 1.6E-16 3.5E-21 165.8 32.4 345 40-414 583-970 (972)
315 PLN03032 serine decarboxylase; 99.8 1.2E-15 2.5E-20 141.8 34.5 338 26-410 9-372 (374)
316 PRK12403 putative aminotransfe 99.8 3.1E-16 6.8E-21 150.9 31.9 353 36-417 48-455 (460)
317 PRK07480 putative aminotransfe 99.8 1.5E-16 3.2E-21 152.9 29.5 355 36-417 44-451 (456)
318 PRK06916 adenosylmethionine--8 99.8 1.4E-16 3.1E-21 153.2 29.3 352 37-417 51-458 (460)
319 PRK12389 glutamate-1-semialdeh 99.8 2.8E-16 6.1E-21 150.3 30.9 344 38-414 49-427 (428)
320 PRK07036 hypothetical protein; 99.8 2.3E-16 5E-21 151.9 30.3 352 36-416 45-454 (466)
321 KOG0053 Cystathionine beta-lya 99.8 1.6E-16 3.4E-21 144.1 27.1 182 85-299 78-265 (409)
322 PLN02482 glutamate-1-semialdeh 99.8 1.6E-16 3.4E-21 152.5 28.8 343 39-414 96-473 (474)
323 PRK07481 hypothetical protein; 99.8 6.1E-16 1.3E-20 148.6 32.6 354 36-416 36-447 (449)
324 TIGR01366 serC_3 phosphoserine 99.8 6.4E-17 1.4E-21 151.4 24.7 314 58-415 12-361 (361)
325 PRK06917 hypothetical protein; 99.8 9.8E-16 2.1E-20 146.9 33.0 358 36-417 25-440 (447)
326 PRK13237 tyrosine phenol-lyase 99.8 1.5E-15 3.2E-20 141.7 32.1 305 79-414 73-433 (460)
327 COG0112 GlyA Glycine/serine hy 99.8 1.5E-15 3.2E-20 135.3 30.4 354 21-414 10-390 (413)
328 COG0161 BioA Adenosylmethionin 99.8 2.2E-16 4.8E-21 146.0 26.2 354 36-417 38-446 (449)
329 TIGR00508 bioA adenosylmethion 99.8 3.8E-16 8.2E-21 149.2 28.3 344 38-414 41-426 (427)
330 PRK06938 diaminobutyrate--2-ox 99.8 1.9E-15 4.2E-20 145.3 32.9 354 38-416 59-462 (464)
331 COG1103 Archaea-specific pyrid 99.8 1.1E-15 2.3E-20 128.7 26.6 323 60-415 29-381 (382)
332 PRK04311 selenocysteine syntha 99.8 3.3E-15 7.2E-20 142.5 33.8 320 58-413 96-463 (464)
333 PF00464 SHMT: Serine hydroxym 99.8 1E-16 2.2E-21 148.0 22.6 355 23-407 6-398 (399)
334 COG2873 MET17 O-acetylhomoseri 99.8 5.3E-16 1.2E-20 136.6 25.8 293 84-414 62-425 (426)
335 KOG2862 Alanine-glyoxylate ami 99.8 1.7E-15 3.8E-20 129.9 27.5 323 60-415 28-383 (385)
336 KOG1404 Alanine-glyoxylate ami 99.8 6.4E-16 1.4E-20 136.8 25.2 349 34-408 42-432 (442)
337 PRK08297 L-lysine aminotransfe 99.8 3.6E-15 7.8E-20 142.9 31.5 345 40-415 43-442 (443)
338 PLN02452 phosphoserine transam 99.8 1.6E-15 3.4E-20 140.9 28.0 328 41-415 5-364 (365)
339 PRK06931 diaminobutyrate--2-ox 99.8 4.6E-15 9.9E-20 142.7 31.8 355 38-417 54-457 (459)
340 KOG1359 Glycine C-acetyltransf 99.7 8.2E-16 1.8E-20 130.8 22.5 327 41-415 66-413 (417)
341 PLN02263 serine decarboxylase 99.7 9E-14 2E-18 131.1 36.2 299 85-415 130-444 (470)
342 TIGR03251 LAT_fam L-lysine 6-t 99.7 1.1E-14 2.4E-19 139.4 30.2 344 40-410 36-430 (431)
343 PRK05367 glycine dehydrogenase 99.7 2.3E-14 5E-19 147.1 34.0 309 83-417 537-878 (954)
344 COG0076 GadB Glutamate decarbo 99.7 5.4E-15 1.2E-19 140.6 27.3 281 59-354 73-381 (460)
345 TIGR03799 NOD_PanD_pyr putativ 99.7 4.1E-14 9E-19 137.0 32.3 311 79-407 120-518 (522)
346 PRK15029 arginine decarboxylas 99.7 1.9E-14 4E-19 143.2 30.1 234 83-333 203-464 (755)
347 PRK06209 glutamate-1-semialdeh 99.7 7.2E-15 1.6E-19 140.7 26.2 335 36-416 42-407 (431)
348 KOG1401 Acetylornithine aminot 99.7 1E-14 2.2E-19 130.2 25.0 347 39-415 53-431 (433)
349 TIGR00699 GABAtrns_euk 4-amino 99.7 1E-14 2.2E-19 139.2 25.6 341 38-412 54-464 (464)
350 TIGR00474 selA seryl-tRNA(sec) 99.7 6E-14 1.3E-18 133.6 30.6 314 58-408 91-453 (454)
351 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.3E-15 2.9E-20 141.2 18.3 239 81-337 62-324 (417)
352 PRK12566 glycine dehydrogenase 99.7 6.3E-14 1.4E-18 140.6 30.8 310 78-415 530-877 (954)
353 KOG1402 Ornithine aminotransfe 99.7 1.6E-14 3.4E-19 125.0 22.4 340 41-413 58-426 (427)
354 TIGR01365 serC_2 phosphoserine 99.7 2.4E-14 5.2E-19 133.0 25.2 322 64-413 19-372 (374)
355 PRK12462 phosphoserine aminotr 99.7 9.9E-14 2.1E-18 127.5 28.2 335 43-415 4-363 (364)
356 PLN02974 adenosylmethionine-8- 99.7 1E-13 2.2E-18 140.1 30.8 347 43-412 366-816 (817)
357 TIGR00461 gcvP glycine dehydro 99.7 3.9E-13 8.4E-18 135.9 34.3 321 77-416 516-869 (939)
358 KOG1358 Serine palmitoyltransf 99.6 4.5E-14 9.8E-19 125.0 19.1 341 40-415 92-466 (467)
359 PRK13578 ornithine decarboxyla 99.6 6.9E-13 1.5E-17 130.8 27.5 174 79-267 168-369 (720)
360 PF00282 Pyridoxal_deC: Pyrido 99.6 7.5E-13 1.6E-17 123.9 25.8 308 19-348 13-369 (373)
361 PRK15400 lysine decarboxylase 99.6 6.5E-13 1.4E-17 130.9 25.5 306 80-413 190-558 (714)
362 PLN02414 glycine dehydrogenase 99.6 1.4E-12 3.1E-17 133.5 27.9 299 60-409 117-464 (993)
363 PRK15399 lysine decarboxylase 99.6 4E-12 8.6E-17 125.4 29.3 170 81-267 191-381 (713)
364 PRK05367 glycine dehydrogenase 99.6 5.7E-12 1.2E-16 129.7 31.3 295 60-409 90-437 (954)
365 PF01212 Beta_elim_lyase: Beta 99.5 2E-14 4.3E-19 129.1 9.0 190 60-268 7-208 (290)
366 KOG1357 Serine palmitoyltransf 99.5 4.2E-13 9.1E-18 121.1 17.1 287 87-413 185-501 (519)
367 TIGR02617 tnaA_trp_ase tryptop 99.5 1.8E-11 3.9E-16 113.2 28.1 339 41-414 40-441 (467)
368 COG1982 LdcC Arginine/lysine/o 99.5 2E-11 4.4E-16 115.7 26.9 304 82-414 67-404 (557)
369 PF00202 Aminotran_3: Aminotra 99.5 2.2E-13 4.9E-18 126.3 13.2 272 39-331 13-314 (339)
370 KOG1403 Predicted alanine-glyo 99.4 4.2E-11 9.1E-16 102.8 19.9 362 26-413 31-436 (452)
371 TIGR03811 tyr_de_CO2_Ent tyros 99.4 2.4E-09 5.3E-14 105.1 34.2 292 23-333 60-475 (608)
372 KOG2467 Glycine/serine hydroxy 99.4 4.7E-10 1E-14 99.0 25.6 360 20-412 23-424 (477)
373 PLN02994 1-aminocyclopropane-1 99.4 8.6E-12 1.9E-16 100.5 12.2 119 19-143 18-153 (153)
374 KOG1383 Glutamate decarboxylas 99.3 1.8E-09 4E-14 98.5 26.5 314 84-417 116-449 (491)
375 COG3844 Kynureninase [Amino ac 99.3 8.7E-10 1.9E-14 96.0 23.1 293 88-417 80-405 (407)
376 COG1003 GcvP Glycine cleavage 99.3 1.7E-09 3.7E-14 97.9 24.8 315 83-416 104-449 (496)
377 TIGR00461 gcvP glycine dehydro 99.2 2.5E-08 5.4E-13 101.6 30.9 305 60-409 78-426 (939)
378 COG1921 SelA Selenocysteine sy 99.1 1.2E-08 2.6E-13 92.9 21.3 223 59-306 38-268 (395)
379 PF06838 Met_gamma_lyase: Meth 99.0 1.3E-08 2.8E-13 90.8 16.6 175 89-285 55-248 (403)
380 PF02347 GDC-P: Glycine cleava 99.0 1.1E-07 2.3E-12 88.9 23.1 281 88-408 114-429 (429)
381 KOG0628 Aromatic-L-amino-acid/ 99.0 2E-07 4.4E-12 85.2 23.2 321 83-416 108-473 (511)
382 COG1932 SerC Phosphoserine ami 99.0 4E-07 8.6E-12 81.5 23.0 332 42-415 4-364 (365)
383 COG3033 TnaA Tryptophanase [Am 99.0 1.1E-06 2.4E-11 78.0 24.7 312 79-415 74-445 (471)
384 COG0403 GcvP Glycine cleavage 98.9 1E-05 2.2E-10 74.0 28.0 312 60-411 89-447 (450)
385 KOG1405 4-aminobutyrate aminot 98.8 1.4E-06 3.1E-11 77.1 19.9 215 170-414 255-483 (484)
386 PF05889 SLA_LP_auto_ag: Solub 98.8 3.1E-06 6.7E-11 77.4 21.7 290 108-413 75-389 (389)
387 PF03841 SelA: L-seryl-tRNA se 98.7 1.8E-08 3.8E-13 91.1 6.7 251 58-332 16-295 (367)
388 COG4100 Cystathionine beta-lya 98.7 1.5E-06 3.3E-11 75.3 15.3 170 84-268 65-250 (416)
389 PRK12566 glycine dehydrogenase 98.6 6.3E-05 1.4E-09 77.0 28.2 277 88-409 128-439 (954)
390 KOG0629 Glutamate decarboxylas 98.5 7.5E-06 1.6E-10 74.5 17.3 317 79-412 132-507 (510)
391 KOG2040 Glycine dehydrogenase 98.0 0.0013 2.7E-08 63.5 20.5 311 83-414 577-918 (1001)
392 KOG3846 L-kynurenine hydrolase 97.9 0.0091 2E-07 52.6 21.1 323 60-416 79-463 (465)
393 KOG3843 Predicted serine hydro 97.8 0.00022 4.8E-09 61.0 9.6 302 100-418 69-406 (432)
394 KOG2790 Phosphoserine aminotra 97.7 0.0052 1.1E-07 53.5 17.5 334 41-415 5-369 (370)
395 PLN02672 methionine S-methyltr 96.9 0.026 5.7E-07 59.7 15.4 214 66-299 408-641 (1082)
396 KOG2040 Glycine dehydrogenase 96.4 0.91 2E-05 44.7 20.1 311 58-409 130-478 (1001)
397 PRK10595 SOS cell division inh 90.5 6.6 0.00014 32.0 10.9 103 109-215 30-136 (164)
398 TIGR00623 sula cell division i 88.8 7.7 0.00017 31.7 10.1 85 126-215 55-140 (168)
399 COG2102 Predicted ATPases of P 83.4 13 0.00028 31.8 9.2 99 109-217 3-116 (223)
400 COG1105 FruK Fructose-1-phosph 73.4 39 0.00085 30.8 9.8 38 185-224 133-170 (310)
401 TIGR00262 trpA tryptophan synt 72.5 70 0.0015 28.4 15.7 157 41-218 37-203 (256)
402 cd06568 GH20_SpHex_like A subg 71.8 8.9 0.00019 35.6 5.6 70 145-218 24-93 (329)
403 PF04392 ABC_sub_bind: ABC tra 71.0 24 0.00053 32.0 8.3 143 61-217 13-164 (294)
404 COG1184 GCD2 Translation initi 69.1 91 0.002 28.4 11.0 103 105-218 117-226 (301)
405 cd02742 GH20_hexosaminidase Be 67.2 13 0.00028 34.1 5.5 69 145-218 22-90 (303)
406 CHL00200 trpA tryptophan synth 66.5 97 0.0021 27.7 15.0 155 41-218 42-207 (263)
407 PLN02955 8-amino-7-oxononanoat 62.7 1.2E+02 0.0026 29.8 11.4 133 78-224 110-261 (476)
408 TIGR01470 cysG_Nterm siroheme 62.5 99 0.0021 26.4 11.0 96 105-221 7-103 (205)
409 TIGR03573 WbuX N-acetyl sugar 62.3 76 0.0017 29.6 9.8 107 107-227 60-174 (343)
410 cd06570 GH20_chitobiase-like_1 62.1 17 0.00036 33.4 5.3 61 146-217 25-85 (311)
411 cd06562 GH20_HexA_HexB-like Be 61.9 15 0.00032 34.5 5.0 64 146-218 25-88 (348)
412 KOG1201 Hydroxysteroid 17-beta 61.6 1.3E+02 0.0028 27.4 10.7 101 105-208 36-144 (300)
413 COG0159 TrpA Tryptophan syntha 60.8 1.2E+02 0.0027 27.0 16.3 91 117-212 108-203 (265)
414 COG0296 GlgB 1,4-alpha-glucan 60.6 13 0.00028 37.5 4.5 36 194-229 208-243 (628)
415 PF05368 NmrA: NmrA-like famil 60.4 65 0.0014 27.9 8.6 91 115-217 7-98 (233)
416 PRK04296 thymidine kinase; Pro 58.9 82 0.0018 26.4 8.6 93 117-222 17-115 (190)
417 PF01902 ATP_bind_4: ATP-bindi 57.2 87 0.0019 27.1 8.5 98 110-217 4-115 (218)
418 PLN02591 tryptophan synthase 56.8 1.4E+02 0.0031 26.4 15.5 156 40-218 28-194 (250)
419 KOG2741 Dimeric dihydrodiol de 55.0 1E+02 0.0022 28.6 8.8 73 140-223 60-132 (351)
420 KOG1467 Translation initiation 51.7 1.3E+02 0.0028 29.2 9.1 131 83-223 324-472 (556)
421 TIGR03815 CpaE_hom_Actino heli 50.4 2.1E+02 0.0045 26.4 12.0 55 167-222 160-214 (322)
422 COG0156 BioF 7-keto-8-aminopel 49.6 2.4E+02 0.0052 26.9 12.4 131 77-224 46-183 (388)
423 TIGR00290 MJ0570_dom MJ0570-re 48.9 1.8E+02 0.0039 25.3 10.3 98 110-217 4-115 (223)
424 cd06569 GH20_Sm-chitobiase-lik 48.5 37 0.00079 33.0 5.4 73 145-217 28-114 (445)
425 TIGR00289 conserved hypothetic 48.0 1.5E+02 0.0033 25.7 8.5 98 110-217 4-115 (222)
426 PF02603 Hpr_kinase_N: HPr Ser 48.0 36 0.00078 26.5 4.4 38 172-218 73-110 (127)
427 PRK05678 succinyl-CoA syntheta 46.1 2.3E+02 0.005 25.8 11.8 44 169-218 78-121 (291)
428 PRK08265 short chain dehydroge 45.9 2.1E+02 0.0045 25.2 9.7 55 107-161 6-60 (261)
429 cd06563 GH20_chitobiase-like T 45.9 39 0.00085 31.8 5.1 73 146-218 25-104 (357)
430 KOG2774 NAD dependent epimeras 44.9 2.1E+02 0.0046 25.0 8.6 72 144-227 93-165 (366)
431 smart00642 Aamy Alpha-amylase 44.4 31 0.00066 28.4 3.6 28 198-225 68-95 (166)
432 PF02571 CbiJ: Precorrin-6x re 43.7 1.9E+02 0.0041 25.6 8.7 99 106-210 129-248 (249)
433 COG0505 CarA Carbamoylphosphat 42.3 84 0.0018 29.2 6.3 57 130-195 178-236 (368)
434 PRK11070 ssDNA exonuclease Rec 42.3 3.8E+02 0.0083 27.2 11.7 95 114-218 53-156 (575)
435 PF03748 FliL: Flagellar basal 41.9 33 0.00071 25.1 3.2 51 62-113 44-94 (99)
436 PRK14454 ribosomal RNA large s 41.8 3E+02 0.0065 25.7 10.9 68 150-218 247-320 (342)
437 TIGR02717 AcCoA-syn-alpha acet 41.2 2.6E+02 0.0056 27.3 10.0 56 170-226 78-134 (447)
438 TIGR01019 sucCoAalpha succinyl 38.9 1.3E+02 0.0029 27.2 7.1 43 170-218 77-119 (286)
439 PLN03244 alpha-amylase; Provis 38.8 50 0.0011 34.4 4.7 37 192-228 433-469 (872)
440 COG0352 ThiE Thiamine monophos 38.0 1.5E+02 0.0032 25.5 6.9 52 170-223 24-75 (211)
441 PF02662 FlpD: Methyl-viologen 37.1 1.7E+02 0.0037 22.7 6.5 49 166-214 38-91 (124)
442 COG0329 DapA Dihydrodipicolina 37.0 3.3E+02 0.0071 24.9 11.5 54 87-143 56-112 (299)
443 PF14258 DUF4350: Domain of un 36.0 1.3E+02 0.0028 20.2 5.2 60 144-219 10-70 (70)
444 TIGR00064 ftsY signal recognit 35.9 3.3E+02 0.007 24.5 11.2 99 117-222 86-202 (272)
445 PRK03892 ribonuclease P protei 35.7 2.8E+02 0.0061 23.7 9.6 29 190-218 143-171 (216)
446 COG2984 ABC-type uncharacteriz 35.3 3.6E+02 0.0078 24.8 12.1 144 59-221 42-196 (322)
447 PF13407 Peripla_BP_4: Peripla 35.0 98 0.0021 27.0 5.8 65 145-218 21-85 (257)
448 TIGR02313 HpaI-NOT-DapA 2,4-di 35.0 2.3E+02 0.0051 25.7 8.2 84 115-220 80-164 (294)
449 KOG1465 Translation initiation 34.9 3.6E+02 0.0077 24.6 9.7 132 78-219 119-270 (353)
450 cd00532 MGS-like MGS-like doma 33.5 2.1E+02 0.0045 21.5 10.0 94 118-220 12-106 (112)
451 TIGR02402 trehalose_TreZ malto 33.4 80 0.0017 31.7 5.3 29 198-226 158-186 (542)
452 PF03652 UPF0081: Uncharacteri 32.4 1.8E+02 0.004 22.9 6.2 58 167-224 37-99 (135)
453 PF00290 Trp_syntA: Tryptophan 32.2 3.7E+02 0.008 24.0 16.2 155 40-217 36-202 (259)
454 COG1216 Predicted glycosyltran 32.0 3.9E+02 0.0085 24.2 11.8 107 109-219 7-119 (305)
455 PRK07718 fliL flagellar basal 31.8 58 0.0013 25.9 3.3 52 62-114 87-138 (142)
456 PF02571 CbiJ: Precorrin-6x re 31.4 1.7E+02 0.0037 25.9 6.4 95 109-217 2-97 (249)
457 PF08986 DUF1889: Domain of un 31.1 17 0.00037 26.2 0.1 81 62-144 22-109 (119)
458 smart00839 ELFV_dehydrog Gluta 31.0 1.9E+02 0.004 21.5 5.7 50 367-416 40-96 (102)
459 COG0108 RibB 3,4-dihydroxy-2-b 31.0 63 0.0014 27.3 3.4 35 181-218 156-190 (203)
460 PRK11889 flhF flagellar biosyn 31.0 5E+02 0.011 25.1 12.7 94 117-223 255-363 (436)
461 PLN00191 enolase 30.9 2.1E+02 0.0045 28.1 7.4 98 115-218 296-393 (457)
462 COG1066 Sms Predicted ATP-depe 30.8 5E+02 0.011 25.1 10.4 115 99-218 84-215 (456)
463 PF01408 GFO_IDH_MocA: Oxidore 30.8 2.3E+02 0.0049 21.2 6.6 21 198-218 98-118 (120)
464 PF06153 DUF970: Protein of un 30.5 85 0.0018 23.7 3.7 52 362-414 12-66 (109)
465 TIGR00715 precor6x_red precorr 30.5 1.7E+02 0.0036 26.1 6.3 95 109-217 2-96 (256)
466 PRK13656 trans-2-enoyl-CoA red 30.5 4.9E+02 0.011 24.9 10.0 54 82-137 16-72 (398)
467 PF13460 NAD_binding_10: NADH( 30.4 3E+02 0.0065 22.4 8.8 89 110-214 1-90 (183)
468 PF00128 Alpha-amylase: Alpha 30.3 56 0.0012 29.5 3.5 29 198-226 50-78 (316)
469 COG1091 RfbD dTDP-4-dehydrorha 29.5 4.1E+02 0.0089 24.0 8.5 98 168-268 37-154 (281)
470 PF13872 AAA_34: P-loop contai 29.5 43 0.00094 30.4 2.4 27 199-225 158-185 (303)
471 PF03460 NIR_SIR_ferr: Nitrite 29.2 47 0.001 22.3 2.1 29 185-214 10-38 (69)
472 cd00408 DHDPS-like Dihydrodipi 29.1 4.2E+02 0.0091 23.7 9.7 38 180-221 123-160 (281)
473 PRK10439 enterobactin/ferric e 28.9 1.6E+02 0.0035 28.3 6.3 54 88-141 268-323 (411)
474 COG1580 FliL Flagellar basal b 28.3 80 0.0017 25.7 3.5 53 62-114 103-155 (159)
475 PF00728 Glyco_hydro_20: Glyco 28.1 65 0.0014 30.0 3.5 67 146-218 25-91 (351)
476 COG0552 FtsY Signal recognitio 28.1 2.5E+02 0.0053 26.1 6.9 105 114-223 150-270 (340)
477 PF10609 ParA: ParA/MinD ATPas 27.6 2.3E+02 0.0049 20.1 6.8 33 180-217 25-57 (81)
478 KOG1177 Long chain fatty acid 27.4 1.4E+02 0.0031 29.1 5.5 78 106-189 235-332 (596)
479 PF02230 Abhydrolase_2: Phosph 27.4 2.6E+02 0.0057 23.8 7.0 123 86-212 83-215 (216)
480 COG0826 Collagenase and relate 26.9 1.9E+02 0.0042 27.0 6.3 46 169-214 15-63 (347)
481 PRK04210 phosphoenolpyruvate c 26.9 6.8E+02 0.015 25.3 10.2 50 86-140 10-59 (601)
482 PF04237 YjbR: YjbR; InterPro 26.8 2.4E+02 0.0052 20.1 6.1 43 364-407 43-87 (92)
483 cd01994 Alpha_ANH_like_IV This 26.7 3.9E+02 0.0084 22.5 9.2 99 110-218 3-119 (194)
484 TIGR02104 pulA_typeI pullulana 26.6 74 0.0016 32.5 3.8 28 199-226 228-255 (605)
485 cd00951 KDGDH 5-dehydro-4-deox 26.6 2.6E+02 0.0056 25.3 7.0 47 165-212 15-65 (289)
486 PRK08535 translation initiatio 26.4 5.1E+02 0.011 23.8 10.3 115 89-218 106-227 (310)
487 PF00106 adh_short: short chai 26.4 3.1E+02 0.0067 21.8 7.0 94 110-208 3-110 (167)
488 PRK08057 cobalt-precorrin-6x r 26.1 3.1E+02 0.0068 24.2 7.2 93 108-217 3-96 (248)
489 PRK03170 dihydrodipicolinate s 26.0 3.5E+02 0.0076 24.4 7.8 36 181-220 128-163 (292)
490 PRK09441 cytoplasmic alpha-amy 25.8 76 0.0017 31.2 3.6 29 198-226 79-107 (479)
491 TIGR02012 tigrfam_recA protein 25.8 2.2E+02 0.0048 26.3 6.4 20 367-386 270-289 (321)
492 PF08672 APC2: Anaphase promot 25.7 97 0.0021 20.5 3.0 34 189-222 25-58 (60)
493 PRK00077 eno enolase; Provisio 25.6 2.2E+02 0.0048 27.6 6.6 85 127-218 273-361 (425)
494 PLN02447 1,4-alpha-glucan-bran 25.3 1E+02 0.0022 32.2 4.5 30 197-226 297-326 (758)
495 PTZ00081 enolase; Provisional 25.2 2.8E+02 0.006 27.0 7.2 96 115-218 282-381 (439)
496 PF15366 DUF4597: Domain of un 25.1 38 0.00082 21.6 0.9 16 185-200 25-40 (62)
497 PRK09354 recA recombinase A; P 25.1 3.3E+02 0.0072 25.5 7.4 28 128-155 85-112 (349)
498 cd03313 enolase Enolase: Enola 25.0 2.1E+02 0.0045 27.5 6.3 94 117-218 264-361 (408)
499 PRK07424 bifunctional sterol d 24.8 6.3E+02 0.014 24.3 10.0 33 106-138 177-209 (406)
500 COG2870 RfaE ADP-heptose synth 24.7 1.8E+02 0.0039 27.7 5.5 126 84-224 51-182 (467)
No 1
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=7.9e-68 Score=459.67 Aligned_cols=409 Identities=56% Similarity=1.030 Sum_probs=392.8
Q ss_pred ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH
Q 014769 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP 88 (419)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~ 88 (419)
|++.-+...+.+...+|+.++..+...+...+..++|.++.|+|+.++++++.+...+|+.++++.+..++|+|+.|...
T Consensus 28 W~f~gs~~a~ka~~~tir~i~~~l~~~~~p~~~k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~Sgk~N~Yaps~G~~~ 107 (447)
T KOG0259|consen 28 WRFKGSDAAKKAASVTIRGILSALFDCCDPEKKKPILPLGHGDPSVYPCFRTSQEAEQAVVDALRSGKGNGYAPSVGILP 107 (447)
T ss_pred eeeccchhhhhhccccHHHHHHHHhhcCCcccCceeccCCCCCCCccccccCCHHHHHHHHHHHhcCCCCCcCCccccHH
Confidence 99999998889999999999999998887666779999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (419)
.|+++|+|+++.....+++++|++|+|.++|++.++.+|.+||..|++|.|+|+.|...+...|++++++.+.|+.+|.+
T Consensus 108 AR~AVAeYl~~~l~~kl~a~DV~ltsGC~qAIe~~i~~LA~p~aNILlPrPGfp~Y~~~a~~~~lEVR~ydlLPe~~weI 187 (447)
T KOG0259|consen 108 ARRAVAEYLNRDLPNKLTADDVVLTSGCSQAIELAISSLANPGANILLPRPGFPLYDTRAIYSGLEVRYYDLLPEKDWEI 187 (447)
T ss_pred HHHHHHHHhhcCCCCccCcCceEEeccchHHHHHHHHHhcCCCCceecCCCCCchHHHhhhhcCceeEeecccCccccee
Confidence 99999999999888889999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEe
Q 014769 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG 248 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 248 (419)
|++.++..++++|.++++.||+||+|.+++.+.|++|++.|+++++++|.||+|.++.|++.++.++..+....++++++
T Consensus 188 DL~~veal~DENT~AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlg 267 (447)
T KOG0259|consen 188 DLDGVEALADENTVAIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLG 267 (447)
T ss_pred chHHHHHhhccCeeEEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999888999999
Q ss_pred cCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
|+||.|..||||+||++..++..++.+...++.+++..+...++++..|.|+..+|++..++++.....-++.+.+...+
T Consensus 268 gisKrW~VPGWRlGWi~~hD~~gvf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~ 347 (447)
T KOG0259|consen 268 GISKRWIVPGWRLGWIALHDPRGVFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYS 347 (447)
T ss_pred ccccccccCCceeeeEEEecccccccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHH
Confidence 99999999999999999999999998888889999998888899999999999999987789999999999999999999
Q ss_pred HhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHH
Q 014769 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l 408 (419)
.|+++|++.|...|++.+|+|++++-..+....++.+|+.+|.+|+.+.+.||..|+.++|+|++++.+.+.+++++.||
T Consensus 348 ~Lk~IP~l~cp~kPeg~mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i~~~~~~leea~~Ri 427 (447)
T KOG0259|consen 348 RLKDIPCLTCPVKPEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLKNWLRIVITVEEEMLEEAFSRI 427 (447)
T ss_pred HHhcCCCcccCcCCCcceEEEeccchhhhccccccHHHHHHHhhhcceEEeccccccCCCeEEEEEccChHHHHHHHHHH
Confidence 99999999998899999999999988766677899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhc
Q 014769 409 KAFCQRHTK 417 (419)
Q Consensus 409 ~~~~~~~~~ 417 (419)
+.++.++.+
T Consensus 428 k~Fc~RH~~ 436 (447)
T KOG0259|consen 428 KEFCDRHSK 436 (447)
T ss_pred HHHHHhhhh
Confidence 999998863
No 2
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=6.6e-63 Score=471.69 Aligned_cols=413 Identities=61% Similarity=1.112 Sum_probs=359.1
Q ss_pred cccccccCchh-hhhCCchhHHHHHHHHHHhhhcCC-CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC
Q 014769 6 ENKWGFEDKQE-HKAAPAVTVKTSLASIIDSVNKND-PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN 83 (419)
Q Consensus 6 ~~~~~~~~~~~-~~~~~~~~i~~~~~~~~~~~~~~~-~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~ 83 (419)
...|.+..+.. +++.....++.++.++.+.+.+.. +.++|+|++|+|+.+|++++++.+.+++.+++..+..+.|+++
T Consensus 14 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~G~P~~~~~~~~~~~~~~a~~~al~~~~~~~Y~~~ 93 (430)
T PLN00145 14 TARWRFERANAALAAAGALSIRAVLNRVKACVDAGGGPRPVLPLGHGDPSAFPCFRTAPEAEDAVAAALRSGKYNSYSTC 93 (430)
T ss_pred cccccccCchhhHHHhcccchhhHHHHHHHhhhcccCCCCeeeCCCCCCCCCCCCCCCHHHHHHHHHHHHcCcCCCCCCC
Confidence 46899998883 667777889999888888776554 7899999999999888899999999999999887666689999
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~ 163 (419)
.|.+++|+++++++.+.++..+++++|++|+|++++++.++.++.++||+|++++|+|+.|...+...|.+++.+++.++
T Consensus 94 ~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~al~l~~~~l~~~Gd~Vlv~~P~y~~y~~~~~~~g~~~~~~~~~~~ 173 (430)
T PLN00145 94 VGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQAIEIIMSVLAQPGANILLPRPGYPLYEARAVFSGLEVRHFDLLPE 173 (430)
T ss_pred ccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeeCCcc
Confidence 99999999999999988898999999999999999999999999999999999999999999999999999999998777
Q ss_pred CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243 (419)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 243 (419)
.+|.+|++.++++++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.|++..+.++..++...+
T Consensus 174 ~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~ 253 (430)
T PLN00145 174 RGWEVDLEGVEALADENTVAMVIINPNNPCGSVYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAP 253 (430)
T ss_pred cCCcCCHHHHHHHhCcCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCc
Confidence 78999999999999888999999999999999999999999999999999999999999999987765566656666668
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
+++++||||.|++||+|+||++++.+..+....++++.++........++.+.|.++..+|+....+++++.++++++++
T Consensus 254 vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~ 333 (430)
T PLN00145 254 VLTLGSISKRWVVPGWRLGWIATCDPNGILKETKVVDSIRNYLNISTDPATFVQGAIPQIIANTKEEFFTKTLGLLKETA 333 (430)
T ss_pred EEEEeccccccCCCCeeEEEEEEecchhhhhhhHHHHHHHHHhcccCCCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 99999999999999999999998654433322223445555554445678899999999998644688999999999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHH
Q 014769 324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKD 403 (419)
Q Consensus 324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~ 403 (419)
+.+.+.|++++++.++..|++|+|+|++++.....+..++.+++.++++++||.+.||..|+..+|+||+++.+++++++
T Consensus 334 ~~~~~~L~~~~g~~~~~~P~ga~y~~v~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~~~~~~~l~~ 413 (430)
T PLN00145 334 DICYEKIKEIKCITCPHKPEGSMFVMVKLDLSCLSGIKDDMDFCCKLAKEESVVVLPGSALGMKNWLRITFAIDPPSLED 413 (430)
T ss_pred HHHHHHHhcCCCCCCCcCCCeeeEEEeccChhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHH
Confidence 99999999988887555799999999998743222223577899899999999999999999899999999988999999
Q ss_pred HHHHHHHHHHHHhcc
Q 014769 404 GLGRMKAFCQRHTKK 418 (419)
Q Consensus 404 ~l~~l~~~~~~~~~~ 418 (419)
++++|++++.++.+.
T Consensus 414 al~rl~~~~~~~~~~ 428 (430)
T PLN00145 414 GLERLKSFCLRHAKL 428 (430)
T ss_pred HHHHHHHHHHHhccc
Confidence 999999999998875
No 3
>PLN02187 rooty/superroot1
Probab=100.00 E-value=4.4e-62 Score=468.76 Aligned_cols=415 Identities=48% Similarity=0.939 Sum_probs=356.0
Q ss_pred CCCCCcccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC
Q 014769 1 MENGAENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY 80 (419)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y 80 (419)
++||..+.|.+.-+.........+|+.+...+++.+.++.+.++|+|++|+|..+|.+.+++.+.+++.+.++.+....|
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~~~~~~~~~~Y 104 (462)
T PLN02187 25 TRNGQSSVWRFGGSDKAAKASTVTLRGVIYMLFDNCGKDVNKTILPLGHGDPSVYPCFRTCIEAEDAVVDVLRSGKGNSY 104 (462)
T ss_pred cccccccccccCcchhhhhhhhchHhhHHHHHHhhcccCCCCCeEECCCCCCCCCCCCCCCHHHHHHHHHHHhCCCCCCC
Confidence 36787888999888777666668999999999888877789999999999999888788889999999998877666689
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769 81 ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160 (419)
Q Consensus 81 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~ 160 (419)
+++.|..++|++||+|+.+.++.++++++|++|+|+++++..++.++++|||+|++++|+|+.|...+...|.+++.+++
T Consensus 105 ~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~~~l 184 (462)
T PLN02187 105 GPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQGIEIVFESLARPNANILLPRPGFPHYDARAAYSGLEVRKFDL 184 (462)
T ss_pred CCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCccHHHHHHHcCCEEEEEeC
Confidence 99999999999999999988888999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.++++|.+|++.++++++++++++++++|+||||.+++.+++++|+++|++++++||+||+|.++.|++..+.++..+..
T Consensus 185 ~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~ 264 (462)
T PLN02187 185 LPEKEWEIDLEGIEAIADENTVAMVVINPNNPCGNVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFAS 264 (462)
T ss_pred ccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhcc
Confidence 76678999999999998888999999999999999999999999999999999999999999999987655555555555
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
..++++++||||.|++||+|+||+++++++.+. ++++.+.... +...+++.+.|.++.++|++...+++++.++
T Consensus 265 ~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~---~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~ 341 (462)
T PLN02187 265 IVPVLTLAGISKGWVVPGWKIGWIALNDPEGVF---ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNK 341 (462)
T ss_pred CCcEEEEecchhhcCCccceeEEEEecCchhHH---HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHH
Confidence 457999999999999999999999986543221 1233444333 2333568899999999997644688999999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~ 397 (419)
.++++++.+.+.|+++++..++..|++|+|+|++++.....+..++.+++.+++.++||.+.||..|+..+|+||+++.+
T Consensus 342 ~l~~~r~~l~~~L~~~~~~~~~~~P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~~~ 421 (462)
T PLN02187 342 ILKHNVDLVCDRLKDIPCVVCPKKPESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALGLKNWMRITIGVE 421 (462)
T ss_pred HHHHHHHHHHHHHhhCCCCcCCCCCCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccCCCCeEEEEeCCC
Confidence 99999999999999886554344789999999988642111222466888888899999999999998889999999989
Q ss_pred HHHHHHHHHHHHHHHHHHhcc
Q 014769 398 PSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~~~~~ 418 (419)
++.+++++++|.++++++.++
T Consensus 422 ~e~l~~al~rL~~~l~~~~~~ 442 (462)
T PLN02187 422 AHMLEDALERLKGFCTRHAKK 442 (462)
T ss_pred HHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999988765
No 4
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-61 Score=453.81 Aligned_cols=378 Identities=27% Similarity=0.448 Sum_probs=328.9
Q ss_pred CCchhHHHHHHHHHHhhhcCCC-CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHH
Q 014769 20 APAVTVKTSLASIIDSVNKNDP-RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLS 98 (419)
Q Consensus 20 ~~~~~i~~~~~~~~~~~~~~~~-~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~ 98 (419)
..+..+..++....+.. +..+ .++|+|++|+| .++.|+.+++++.+++..+.. .|.++.|.++||++|++++.
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~~~~vi~l~iG~P----d~~~p~~i~~a~~~a~~~~~~-~Y~~~~G~~~LReaia~~~~ 79 (393)
T COG0436 6 VLPSYTFAVLAEAKAAA-ELKGKEDVIDLSIGEP----DFPTPEHIIEAAIEALEEGGT-HYTPSAGIPELREAIAEKYK 79 (393)
T ss_pred cCcchhHHHHhHHHHHH-HhcCCCCEEEeCCCCC----CCCCCHHHHHHHHHHHhcccC-CCCCCCCCHHHHHHHHHHHH
Confidence 34444555555222222 2223 68999999996 478899999999999887644 67799999999999999999
Q ss_pred hhCCCCCCCCc-EEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHh
Q 014769 99 RDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEAL 176 (419)
Q Consensus 99 ~~~~~~~~~~~-i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~ 176 (419)
+++|+.+++++ |++|+|+++|+..++.++++|||+|++++|.|+.|.......|..++.++++.+ ++|.+|++.++++
T Consensus 80 ~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~ 159 (393)
T COG0436 80 RRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAA 159 (393)
T ss_pred HHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEEeCCcCccCCcCCHHHHHhh
Confidence 99999999877 999999999999999999999999999999999999999999999999998665 4899999999999
Q ss_pred hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCC
Q 014769 177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWL 255 (419)
Q Consensus 177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~ 255 (419)
++++++++++++||||||.+++.+++++|+++|++|+++||.||+|..+.|++..++++..+.. .+++|+++||||.|+
T Consensus 160 i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~~~~~~~~~i~i~s~SK~~~ 239 (393)
T COG0436 160 ITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYG 239 (393)
T ss_pred cCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhhcCCCcceEEEEeccccccc
Confidence 9999999999999999999999999999999999999999999999999999865555555544 468999999999999
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
++|||+||++++++ ++++.+.... ....+++.+.|.++..+|+... ...++.+++.++++++.+.+.|.++
T Consensus 240 mtGwRvG~~v~~~~-------~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~ 312 (393)
T COG0436 240 MTGWRIGWVVGPPE-------ELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEI 312 (393)
T ss_pred ccccceeEeecChH-------HHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999741 5777777554 4456889999999999999754 2678888899999999999999998
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEeecCHHHHHHHHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
+|+.++..|+|++|+|++++.. .++.+|+.+|++++||.|.||+.|+.. +++|++++.+++.+++++++|.+
T Consensus 313 ~g~~~~~~p~Ga~Y~~~~i~~~-----~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~~~~~l~~a~~rl~~ 387 (393)
T COG0436 313 GGLSVVKPPEGAFYLFPKIPEL-----LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLATSEETLEEALRRLAR 387 (393)
T ss_pred CCeeeccCCCeeEEEEeecCCC-----CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEEecCHHHHHHHHHHHHH
Confidence 7898664499999999999863 378999999999999999999999975 89999999888999999999999
Q ss_pred HHHHH
Q 014769 411 FCQRH 415 (419)
Q Consensus 411 ~~~~~ 415 (419)
+++.+
T Consensus 388 ~~~~~ 392 (393)
T COG0436 388 FLAEY 392 (393)
T ss_pred HHHhc
Confidence 98865
No 5
>PLN02656 tyrosine transaminase
Probab=100.00 E-value=2.1e-59 Score=446.60 Aligned_cols=394 Identities=62% Similarity=1.112 Sum_probs=335.9
Q ss_pred HHHHHHHHHHhh-hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 014769 25 VKTSLASIIDSV-NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103 (419)
Q Consensus 25 i~~~~~~~~~~~-~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~ 103 (419)
|+.++.+++..+ .+..+.++|+|++|+|...+.+++++.+++++.+++.......|+++.|.+++|+++++++.+.+|.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~ 92 (409)
T PLN02656 13 IKGILSLLMESIDDEENGKRVISLGMGDPTAYSCFHTTHVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPY 92 (409)
T ss_pred hhhHHHHHHHhccccccCCeeeecCCCCCCcCCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCC
Confidence 788888877766 3446889999999999866668889999999999887766678999999999999999999998888
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
.+++++|++|+|+++++..++.+++++||+|++++|+|+.+...+...|+++..+++++++++.+|++.++.++++++++
T Consensus 93 ~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~ 172 (409)
T PLN02656 93 KLSLDDVFITSGCTQAIDVALSMLARPGANILLPRPGFPIYELCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVA 172 (409)
T ss_pred CCCcccEEEeCChHHHHHHHHHHHhCCCCeEEEeCCCCCcHHHHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceE
Confidence 89999999999999999999999999999999999999999888888999999999876667889999999998888999
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
+++++|+||||.+++.+++++|+++|+++++++|+||+|.++.|++....++..++...++|+++||||.|++||+|+||
T Consensus 173 v~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRiG~ 252 (409)
T PLN02656 173 LVIINPGNPCGNVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRWIVPGWRLGW 252 (409)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhccCcceeEEE
Confidence 99999999999999999999999999999999999999999998775545555555556899999999999999999999
Q ss_pred EEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 343 (419)
+++++++.+...+++++.+........+++.+.|.++..++++....++++.+++++++++.+.+.|++++++..+..|+
T Consensus 253 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~~~p~ 332 (409)
T PLN02656 253 FVTTDPSGSFRDPKIVERIKKYFDILGGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIPCITCPHKPE 332 (409)
T ss_pred EEEeCcccccccHHHHHHHHHHHhhhcCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCCcCCC
Confidence 99975433322235777777665444467889999999999864467899999999999999999999876554344799
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
+|+|+|++++.....+..++.+++.++++++||.+.||+.|+..+|+||+++.+++++++++++|++++.++.++
T Consensus 333 gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~~~~e~l~eal~rl~~~~~~~~~~ 407 (409)
T PLN02656 333 GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVGLKNWLRITFAADPSSLEEALGRIKSFYLRHSKT 407 (409)
T ss_pred eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHhccc
Confidence 999999998742211112356777788889999999999998889999999989999999999999999877643
No 6
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=100.00 E-value=9.6e-59 Score=441.75 Aligned_cols=394 Identities=64% Similarity=1.118 Sum_probs=332.0
Q ss_pred HHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC
Q 014769 25 VKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK 104 (419)
Q Consensus 25 i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~ 104 (419)
|+..+.++.+.+.++.++++|+|+.|+|..+..+++++.+++++.+++.......|+++.|.+++|++|++|+.+.+|.+
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~ 94 (409)
T PLN00143 15 IDDAVKFLKENFNEDDHRLAISFGFGDPSCFECFRTTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQ 94 (409)
T ss_pred HHHHHHHHHHhcccCCCCceeeCCCCCCCCCCCCCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCC
Confidence 77777777777777889999999999987555588899999999998877666689998999999999999999988888
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+++++|++|+|+++++..++.+++++||.|++++|+|+.+...+...|.++..++++++++|.+|++.++++++++++.+
T Consensus 95 ~~~~~I~it~G~~~al~~~~~~l~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~ 174 (409)
T PLN00143 95 LSPDDVYLTLGCKHAAEIIIKVLARPEANILLPRPGFPDVETYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAM 174 (409)
T ss_pred CCHhhEEEecChHHHHHHHHHHHcCCCCEEEEcCCCCcCHHHHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEE
Confidence 99999999999999999999999999999999999999999999999999999988666678899999999888788999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
++++||||||.+++.+++++|+++|+++++++|+||+|..+.+++....++..+....++++++||||.|++||+|+||+
T Consensus 175 ~~~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~ 254 (409)
T PLN00143 175 VIINPGNPCGSVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRWMIPGWGLGWL 254 (409)
T ss_pred EEECCCCCCCCccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhcCCCccceEEE
Confidence 99999999999999999999999999999999999999999987654445555555568999999999999999999999
Q ss_pred EeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+++++..+.+..+.++.+.........++.+.|.++..+|++....++++.+++++++++.+.+.|+++++..+...|++
T Consensus 255 v~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~~~p~g 334 (409)
T PLN00143 255 VTCDPSGLLQICEIADSIKKALNPAPFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMCPQKAEG 334 (409)
T ss_pred EeeCchhhhhhHHHHHHHHHHHhccCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCe
Confidence 98654322211123344444333233357789999999997644678999999999999999999988755443447889
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
|+|+|++++.....+..++.+++.+++.++||.+.||..|+..+|+||+++.+++++++++++|+++++++++.
T Consensus 335 g~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~~~~~~~l~~al~rl~~~l~~~~~~ 408 (409)
T PLN00143 335 AFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVGLKNWLRITFAVEQSSLEDGLGRLKSFCGRHAKK 408 (409)
T ss_pred eEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEEcCCHHHHHHHHHHHHHHHHHhccC
Confidence 99999999742111122467888888889999999999998889999999988999999999999999988764
No 7
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-55 Score=417.37 Aligned_cols=376 Identities=33% Similarity=0.629 Sum_probs=318.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhC------CCCCCCCcEEE
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL------PYKLSADDVYV 112 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~------~~~~~~~~i~~ 112 (419)
..++++|+|+.|+|...+.+.+++.+.+++.+.+.......|+++.|.++||++|++|+.+.+ |..+++++|++
T Consensus 30 ~~~~~~i~l~~g~p~~~~~~~p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~i 109 (412)
T PTZ00433 30 PSPKSIIKLSVGDPTLDGNLLTPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVL 109 (412)
T ss_pred CCCCCeeecCCcCCCCcCCCCCCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEE
Confidence 358899999999997655566789999999888776555689999999999999999998754 45688999999
Q ss_pred cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769 113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 192 (419)
|+|+++++..++.+++++||+|+++.|+|..+...++..|.++..+++++++++++|+++++++++++++++++++||||
T Consensus 110 t~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NP 189 (412)
T PTZ00433 110 CSGVSHAILMALTALCDEGDNILVPAPGFPHYETVCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNP 189 (412)
T ss_pred eCChHHHHHHHHHHhcCCCCEEEEccCCcccHHHHHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCC
Confidence 99999999999999999999999999999999999999999999999876667899999999988888899999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI 272 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 272 (419)
||.+++.+++++|+++|+++|+++|+||+|.++.+++....++..+....++++++||||.|++||+|+||++++++...
T Consensus 190 tG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 190 CGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTSVADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CCcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccchhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 99999999999999999999999999999999988765444555555444689999999999999999999997433211
Q ss_pred cchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec
Q 014769 273 FQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL 352 (419)
Q Consensus 273 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~ 352 (419)
. +++++.++......++++.+.|.++..++.+....++++.++.++++++.+.+.|+++.++. +..|++|+|+|+++
T Consensus 270 ~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~f~~~~l 346 (412)
T PTZ00433 270 G--GDFLDGMKRLGMLVCGPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGECIGLS-PTMPRGSMFLMSRL 346 (412)
T ss_pred H--HHHHHHHHHHhhccCCCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCeeEEEEEEe
Confidence 1 14666666654434578899999999998764468899999999999999999998865676 55899999999998
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769 353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+.....+..++.+++..+++++||.+.||+.|+..+++||+++.+++++++++++|.++++++++
T Consensus 347 ~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~~~~~e~l~~al~~l~~~~~~~~~ 411 (412)
T PTZ00433 347 DLEKFRDIKSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTISRPVEVLREAVERIKAFCERHKK 411 (412)
T ss_pred chhhcCCCCCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhcc
Confidence 74211111246788888887889999999999888999999998899999999999999988764
No 8
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=100.00 E-value=4e-55 Score=428.14 Aligned_cols=399 Identities=22% Similarity=0.416 Sum_probs=323.5
Q ss_pred cccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCH
Q 014769 8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87 (419)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~ 87 (419)
+|....++++..-..+.+..+.. ..+.+ +..|.++|+|+.|+|..+ .+++++.+.+++.+.+.. ...|+++.|..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~g~~~i~l~~G~p~~~-~~~~p~~~~~~~~~~~~~--~~~Y~~~~G~~ 188 (517)
T PRK13355 114 RRTFKKSHKLDNVLYDVRGPVVD-EANRM-EAAGTHILKLNIGNPAPF-GFRTPDEVVYDMAQQLTD--TEGYSDSKGLF 188 (517)
T ss_pred ccCCChhHHhhccCccHHHHHHH-HHHHH-HHcCCCeEEecCcCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCcChH
Confidence 36666666666666655544443 44444 335889999999998754 366788899998887753 34799999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (419)
+||++|++|+.++.+.++++++|++|+|+++++..++.+++++||+|++++|+|+.|...+...|.+++.++++++++|.
T Consensus 189 ~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~~~~~~~g~~~v~~~~~~~~~~~ 268 (517)
T PRK13355 189 SARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWTACVNLAGGTAVHYRCDEQSEWY 268 (517)
T ss_pred HHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHHHHHHHCCCEEEEeecCcccCCC
Confidence 99999999998876667899999999999999999999999999999999999999999999999999999988777899
Q ss_pred cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
+|+++++.+++++++++++++||||||.+++.+++++|+++|++|+++||+||+|..+.|++....++..+..+..++++
T Consensus 269 ~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~ 348 (517)
T PRK13355 269 PDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTF 348 (517)
T ss_pred CCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEE
Confidence 99999999998889999999999999999999999999999999999999999999999887555565555444457888
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEI 325 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~ 325 (419)
+||||.|+++|+|+||++++.+..+. .++++.+........+.+.++|.++..+|.... .+++.+. .++.++++.
T Consensus 349 ~S~SK~~~~~G~RiG~~i~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~q~a~~~aL~~~~~~~~~~~~~-~~~~~~r~~ 425 (517)
T PRK13355 349 SGLSKSHMIAGYRIGWMILSGNKRIA--KDYIEGLNMLANMRLCSNVPAQSIVQTALGGHQSVKDYLVPG-GRVYEQREL 425 (517)
T ss_pred ecchhhccCcccceEEEEeeCchhhH--HHHHHHHHHHhcCcCCcChHHHHHHHHHhcCCccHHHHHHHH-HHHHHHHHH
Confidence 99999999999999999976432211 023444443333345678899999999996422 3455554 345566899
Q ss_pred HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHH
Q 014769 326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKD 403 (419)
Q Consensus 326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~ 403 (419)
+.+.|+++|++. +..|++++|+|++++.... +..++.+++.++++++||.+.||+.|+ .++||||+++.++++|++
T Consensus 426 l~~~L~~~~g~~-~~~p~g~fy~~~~l~~~~~-~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~~~~~~~l~~ 503 (517)
T PRK13355 426 VYNALNAIPGIS-AVKPKAAFYIFPKIDVKKF-NIHDDEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVYLPRLEDLED 503 (517)
T ss_pred HHHHHhcCCCcc-cCCCCeeeEEEeecCcccC-CCCCHHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEeCCCHHHHHH
Confidence 999999888888 5589999999998874211 122567888888899999999999997 368999999989999999
Q ss_pred HHHHHHHHHHHHh
Q 014769 404 GLGRMKAFCQRHT 416 (419)
Q Consensus 404 ~l~~l~~~~~~~~ 416 (419)
++++|++++.+++
T Consensus 504 a~~rl~~~~~~~~ 516 (517)
T PRK13355 504 AMDRLADFFSYYR 516 (517)
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998763
No 9
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=100.00 E-value=9.9e-55 Score=414.31 Aligned_cols=395 Identities=50% Similarity=0.920 Sum_probs=331.4
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 96 (419)
.+...-..|+.+...+.+. ...+.++|+|+.|+|..+|.+++++.+.+++.+.+.......|++..|..++|++++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~ 85 (403)
T TIGR01265 8 HAKKTVNPIRAIVDNLKVK--PNPEKPIIPLSHGDPSVFGNLRTDPEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEY 85 (403)
T ss_pred HHHHHHHHHHHHHHHHHHH--HhcCCCeEEeCCCCCCccCCCCCCHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHH
Confidence 3344556677777655442 23478999999999987778889999999999988765556898889999999999999
Q ss_pred HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769 97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
+....+..+++++|++|+|+++++..++.+++.+||+|++++|+|..+...++..|.+++.+++++++++.+|++.++++
T Consensus 86 l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 165 (403)
T TIGR01265 86 LSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYDTRAAFSGLEVRLYDLLPEKDWEIDLDGLEAL 165 (403)
T ss_pred HHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEecCCcccCCccCHHHHHHH
Confidence 98877888889999999999999999999999999999999999999999999999999998886666788999999998
Q ss_pred hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769 177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256 (419)
Q Consensus 177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 256 (419)
+.++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|.++.+++....++..+....++|+++||||.|++
T Consensus 166 ~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~ 245 (403)
T TIGR01265 166 ADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIPMASFASIVPVLSLGGISKRWVV 245 (403)
T ss_pred hCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccchhhhccCCcEEEEeecccccCC
Confidence 88889999999999999999999999999999999999999999999998877555566666655679999999999999
Q ss_pred CCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI 336 (419)
Q Consensus 257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 336 (419)
||+|+||++++++..++. .++++.+........+++.+.|.++..++++....++++.+++++++++.+.+.|+.++++
T Consensus 246 pGlRiG~~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 324 (403)
T TIGR01265 246 PGWRLGWIIIHDPHGIFR-DTVLQGLKNLLQRILGPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGL 324 (403)
T ss_pred CcceEEEEEEeCchhhhH-HHHHHHHHHHhhhhcCCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 999999999865422221 1244445444433456788999999999976456789999999999999999999988777
Q ss_pred CCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 337 SCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 337 ~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
. +..|.+|+|+|++++.....+..++.+++..+++++||.+.||..|+.++++||+++.+++++++++++|.+++.++
T Consensus 325 ~-~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~ 402 (403)
T TIGR01265 325 V-CPKPEGAMYLMVKLELELFPEIKDDVDFCEKLVREESVICLPGSAFGLPNWVRITITVPESMLEEACSRIKEFCERH 402 (403)
T ss_pred e-ecCCCceeEEEEeccccccCCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 6 55799999999999753211112567888888888999999999998889999999988899999999999999775
No 10
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=100.00 E-value=2.6e-54 Score=411.68 Aligned_cols=392 Identities=35% Similarity=0.707 Sum_probs=322.4
Q ss_pred hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
+......++.++..... . .+.+.++|+|+.|.|...+.+++++.+.+++.+.+.......|++..|..++|+++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~-~-~~~~~~~i~l~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~ 86 (401)
T TIGR01264 9 SKNTVNPIRAIVDNMKV-K-PNPEKPMIKLSIGDPTVFGNLPTDPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYY 86 (401)
T ss_pred HhhhhhHHHHHHHHHHh-h-hhcCCCeeecCCCCCCCcCCCCCCHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 34444556666653332 1 234678999999998643456788999999998877655567998899999999999999
Q ss_pred HhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh
Q 014769 98 SRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (419)
Q Consensus 98 ~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (419)
.+ .+..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.++..++++.++++++|++.++..+
T Consensus 87 ~~-~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~~~~~~~g~~v~~~~~~~~~~~~~d~~~l~~~~ 165 (401)
T TIGR01264 87 HN-PDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYETLAESMGIEVKLYNLLPDKSWEIDLKQLESLI 165 (401)
T ss_pred hh-cCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHHh
Confidence 87 45568899999999999999999999999999999999999999999999999999998876667889999999988
Q ss_pred cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC
Q 014769 178 DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP 257 (419)
Q Consensus 178 ~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 257 (419)
+++++++++++|+||||.+++.+++++|+++|+++++++|+||+|.++.+++....++..+....++|+++||||.|+++
T Consensus 166 ~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~ 245 (401)
T TIGR01264 166 DEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVP 245 (401)
T ss_pred ccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCc
Confidence 87889999999999999999999999999999999999999999999988765555555555544689999999999999
Q ss_pred CceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 258 G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
|+|+||++++++.... .++++.++.......+++.+.|.++..+|.+...+++++.++.++++++.+.+.|++++++.
T Consensus 246 GlRiG~iv~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~ 323 (401)
T TIGR01264 246 GWRLGWIIIHDRRGIL--RDIRDGLVKLSQRILGPCTIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLR 323 (401)
T ss_pred cceEEEEEecCcchhH--HHHHHHHHHHhhccCCCCcHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999999987532111 12445555443334567889999999999764468899999999999999999999887766
Q ss_pred CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..|++|+|+|++++.....+..++.+++.++++++||.+.||+.|+.++++|++++.+++++++++++|.++++++
T Consensus 324 -~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 324 -PVMPSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred -ccCCCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 45899999999998642111122467888888888999999999998889999999988999999999999998764
No 11
>PRK06855 aminotransferase; Validated
Probab=100.00 E-value=1.2e-53 Score=409.10 Aligned_cols=375 Identities=23% Similarity=0.335 Sum_probs=306.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
..+.++++|++|+|... .+++++.+.+++.+.+.......|++..|.++||+++++|+++.+|..+++++|++|+|+++
T Consensus 29 ~~g~~~~~~~~G~p~~~-~~~~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~ 107 (433)
T PRK06855 29 KLGVKITWENIGDPIAK-GEKIPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGD 107 (433)
T ss_pred hccccccccccCCCccc-CCCCCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHH
Confidence 34778999999998543 46788999999988876555568999999999999999999998899999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHH-HhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeCCCCcccc
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGN 195 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~ 195 (419)
++..++. ++.+||.|++++|+|+.+... ....|..++.++++++++|.+|+++|+++++ ++++++++++|+||||.
T Consensus 108 al~~~~~-l~~~Gd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~ 186 (433)
T PRK06855 108 AIAKIYG-LLRREARVIGPSPAYSTHSSAEAAHAGYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGA 186 (433)
T ss_pred HHHHHHH-hcCCCCeEEEeCCCCchHHHHHHHhcCCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCc
Confidence 9999985 788999999999999987654 2455888888888766778899999999886 35688999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
++|.+++++|+++|+++|++||+||+|..+.|++..++++..+..+.++|+++||||.|++||+|+||++++++...-.-
T Consensus 187 ~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~~~ 266 (433)
T PRK06855 187 VYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDEVF 266 (433)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhhHH
Confidence 99999999999999999999999999999998775555655554444689999999999899999999998532100000
Q ss_pred hhHHHHHHhhhccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 276 SGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 276 ~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
..+++.+........+++.+.|.++.+++.+.. .+++++.+..++++++.+.+.|++++++. +..|++|+|+|++++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~-~~~p~gg~~~w~~l~~ 345 (433)
T PRK06855 267 KKYINSILNAKMIEVCSTTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVPGLK-VNRTNGAFYMTVVFED 345 (433)
T ss_pred HHHHHHHHHhhccccCCChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCCCee-ccCCCeeEEEeecccc
Confidence 023343433322334578899999999998754 57899999999999999999998877776 5589999999999985
Q ss_pred ccc--------c-------------C-CCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHH
Q 014769 355 WLL--------E-------------D-INDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKA 410 (419)
Q Consensus 355 ~~~--------~-------------~-~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~ 410 (419)
... . + ..++.+++..+++++||.+.||+.|+. ..++||+++ .++++|++++++|.+
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~Rls~~~~~~~~i~~~~~~l~~ 425 (433)
T PRK06855 346 GVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFRVTLLERDEEKFEWIYQTLAE 425 (433)
T ss_pred ccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceEEEECCCcHHHHHHHHHHHHH
Confidence 310 0 0 013667888888999999999999975 357999997 589999999999999
Q ss_pred HHHHHh
Q 014769 411 FCQRHT 416 (419)
Q Consensus 411 ~~~~~~ 416 (419)
+++++.
T Consensus 426 ~~~~~~ 431 (433)
T PRK06855 426 KIEEYL 431 (433)
T ss_pred HHHHHh
Confidence 998754
No 12
>PLN00175 aminotransferase family protein; Provisional
Probab=100.00 E-value=1.5e-53 Score=405.92 Aligned_cols=353 Identities=28% Similarity=0.464 Sum_probs=305.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a 119 (419)
+.++|+|+.|.|. +++++.+++++.+.+.+. ...|+++.|.++||+++++++++.+|..++++ +|++|+|++++
T Consensus 53 ~~~~i~l~~G~P~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~a 127 (413)
T PLN00175 53 KHGAINLGQGFPN----FDGPDFVKEAAIQAIRDG-KNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEA 127 (413)
T ss_pred cCCeEecCCCCCC----CCCCHHHHHHHHHHHhcC-CCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHH
Confidence 4589999999975 456788899998888763 45899999999999999999999889888997 79999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.+++++||+|++++|+|..+...++..|.+++.++++++ ++.+|++.+++.+.++++++++++|+||||.++|.
T Consensus 128 l~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~-~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~ 206 (413)
T PLN00175 128 IAATILGLINPGDEVILFAPFYDSYEATLSMAGAKIKTVTLRPP-DFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTR 206 (413)
T ss_pred HHHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEEECCcc-cCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCH
Confidence 99999999999999999999999999999999999999998654 37899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++++++|+||+|..+.|++. ..++..+.. .+++|+++||||.|+++|+|+||+++++ ++
T Consensus 207 ~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~-~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~--------~l 277 (413)
T PLN00175 207 EELELIASLCKENDVLAFTDEVYDKLAFEGD-HISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP--------HL 277 (413)
T ss_pred HHHHHHHHHHHHcCcEEEEecccCccccCCc-ccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH--------HH
Confidence 9999999999999999999999999988653 334444432 4679999999999999999999999875 57
Q ss_pred HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
++.+..... ...+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++..
T Consensus 278 ~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~~f~~~~~~~~-- 352 (413)
T PLN00175 278 TWGVRQAHSFLTFATATPMQWAAVAALRAP-ESYYEELKRDYSAKKDILVEGLKEV-GFK-VYPSSGTYFVMVDHTPF-- 352 (413)
T ss_pred HHHHHHHHhhccCCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeEEEEEecccc--
Confidence 787776653 35778899999999999763 5788999999999999999999987 777 55899999999987431
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCC-----CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGL-----KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+..++.+++.++++++||.+.||+.|+. .+++||+++.+++++++++++|++++++
T Consensus 353 -~~~~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~~~~~e~l~~~~~rL~~~~~~ 413 (413)
T PLN00175 353 -GFENDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAFCKDEETLRAAVERMKTKLKR 413 (413)
T ss_pred -CCCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEEcCCHHHHHHHHHHHHHHHhC
Confidence 1124678999998889999999998852 4699999988999999999999988763
No 13
>PRK06207 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-53 Score=404.49 Aligned_cols=359 Identities=20% Similarity=0.284 Sum_probs=306.4
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~a 119 (419)
+.+.|+|+.|+|.. .++++.+.+++.+.+.......|+++.|.++||++|++++.+.+|..+++ ++|++|+|++++
T Consensus 38 ~~~~i~l~~g~~~~---~~p~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~a 114 (405)
T PRK06207 38 PGRPVDFSHGDVDA---HEPTPGAFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGA 114 (405)
T ss_pred CCCceecCCcCCCC---CCCCHHHHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 56789999999762 34567888888888766545689999999999999999999988988888 899999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc---CCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL---PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 196 (419)
+..++.+++++||+|++++|+|+.+...++..|.+++.++++ ++.++++|++.++++++++++++++++|+||||.+
T Consensus 115 l~~~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~ 194 (405)
T PRK06207 115 LFLAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVV 194 (405)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcC
Confidence 999999999999999999999999999999999999988875 33468899999999988888999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
++.+++++|+++|+++|++||+||+|..+.|++..+.++..+. ..+++++++||||.|++||+|+||++++.
T Consensus 195 ~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~~------- 267 (405)
T PRK06207 195 YSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHLRALPIDPENVITIMGPSKTESLSGYRLGVAFGSP------- 267 (405)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCchhcCCCCcCcEEEEecchhhccCcccceEEEEcCH-------
Confidence 9999999999999999999999999999998775544444332 24689999999999999999999999865
Q ss_pred hhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 276 SGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 276 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++++.+..... ...+.+.+.|.++..++++. ..++++..++++++++.+.+.|++++++. +..|++|+|+|++++.
T Consensus 268 -~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~p~gg~fl~~~l~~ 344 (405)
T PRK06207 268 -AIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEP-DGWMKDRIARHQAIRDDLLRVLRGVEGVF-VRAPQAGSYLFPRLPR 344 (405)
T ss_pred -HHHHHHHHHHhHhccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeEEEEEeCcc
Confidence 57777776643 23456778899999999752 35677888888889999999998877777 5578999999999974
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.. .++.+++..+++++||.+.||..|+. .+++||+++.+++++++++++|.+++++++
T Consensus 345 ~~----~~~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~~ 404 (405)
T PRK06207 345 LA----VSLHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNFSQDHAAAVAAAERIAQLIERYR 404 (405)
T ss_pred cC----CCHHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 21 24678888887788999999998864 689999998889999999999999998865
No 14
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=100.00 E-value=4.8e-53 Score=401.46 Aligned_cols=356 Identities=18% Similarity=0.283 Sum_probs=297.8
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~ 117 (419)
..+.++|+|+.|+|. +++++.+.+++.+.+.......|+++.|.++||++|++|+.+.+|.+++++ +|++|+|++
T Consensus 27 ~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~ 102 (388)
T PRK07366 27 AAGKELIDLSLGSSD----LPAPAHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQ 102 (388)
T ss_pred hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcH
Confidence 347889999999864 566788899998887654456799989999999999999998889889998 699999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
+++..++++++++||+|++++|+|+.+...++..|.+++.+++++++++.+|++.+.+.+.++++++++++||||||.++
T Consensus 103 ~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~ 182 (388)
T PRK07366 103 EGTAHLPLAVLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIA 182 (388)
T ss_pred HHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccC
Confidence 99999999999999999999999999999999999999999997777788899999887777789999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCC-CCCccccCCC-CcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-YTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
+.+++++|+++|++++++||+||+|..+.+++.. .+++..++.. .++|+++||||.|++||+|+||++++.
T Consensus 183 s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~------- 255 (388)
T PRK07366 183 PLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIGNA------- 255 (388)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcCCH-------
Confidence 9999999999999999999999999999887643 4445444433 468999999999999999999999865
Q ss_pred hhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 276 SGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 276 ~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++++.+...... ..+..+..+.++...+.. ..+++++.++.++++++.+.+.|+++ ++. +..|++|+|+|++++.
T Consensus 256 -~li~~l~~~~~~~~~~~~~~~~~~a~~~l~~-~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~~~~ 331 (388)
T PRK07366 256 -QLIQALRQVKAVVDFNQYRGILNGAIAALTG-PQATVQQTVQIFRQRRDAFINALHQI-GWP-VPLPEATMYVWAKLPE 331 (388)
T ss_pred -HHHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeeEEEEEECCc
Confidence 688888766542 223323333344444432 25789999999999999999999987 666 4579999999999974
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
.. ..++.+++.++++++||.+.||+.|+. .+|+||+++.+++++++++++|++++
T Consensus 332 ~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl~~~l 388 (388)
T PRK07366 332 PW---QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFALVHDPDILEEAVERIAAFL 388 (388)
T ss_pred cc---CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEecCCHHHHHHHHHHHHHhC
Confidence 21 013677888888889999999999875 58999999888999999999998763
No 15
>PRK08960 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-52 Score=397.81 Aligned_cols=376 Identities=22% Similarity=0.353 Sum_probs=317.2
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
++.+...+..+.++.....+. ...++++|+|+.|.|. +++++.+.+++.+.+.... ..|.++.|.+++|++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~Y~~~~g~~~lr~~ia 79 (387)
T PRK08960 7 RRSRDIEPFHVMALLARANEL--EAAGHDVIHLEIGEPD----FTTAEPIVAAGQAALAAGH-TRYTAARGLPALREAIA 79 (387)
T ss_pred hHHHhCCchHHHHHHHHHHHH--HhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CccCCCCCCHHHHHHHH
Confidence 445556667777777654332 2247789999999964 5668899999998887543 47988899999999999
Q ss_pred HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769 95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (419)
+++.+.+|.++++++|++|+|++++++.++.+++.+||+|++++|+|+.+...+...|.+++.++++.++++.+|++.++
T Consensus 80 ~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~ 159 (387)
T PRK08960 80 GFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDSRYQLTPALVE 159 (387)
T ss_pred HHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCeEEEEecCcccCCCCCHHHHH
Confidence 99998889899999999999999999999999999999999999999999999999999999999876667889999999
Q ss_pred HhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769 175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW 254 (419)
Q Consensus 175 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 254 (419)
+.++++++.+++++|+||||.++|.+++++|+++|+++|+++|+||+|.++.+++. ..++... .+++++++||||.|
T Consensus 160 ~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~-~~~~~~~--~~~vi~~~S~SK~~ 236 (387)
T PRK08960 160 RHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVD-AASVLEV--DDDAFVLNSFSKYF 236 (387)
T ss_pred HHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCC-CCChhhc--cCCEEEEeeccccc
Confidence 99888888999999999999999999999999999999999999999999887643 2333333 35799999999999
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
+++|+|+||+++++ ++++.+..... ...+++.+.|.++..++......++++.+..++++++.+.+.|+++
T Consensus 237 g~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~ 308 (387)
T PRK08960 237 GMTGWRLGWLVAPP--------AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL 308 (387)
T ss_pred CCcccEEEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999975 57777776643 3456788999998888875345788899999999999999999987
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
++.++..|.+|+|+|++++... .++.+++.++++++||.+.||+.|+. .+|+|++++.+.+++.+++++|.+
T Consensus 309 -~~~~~~~p~g~~f~~~~~~~~~----~~~~~~~~~ll~~~gi~v~pg~~f~~~~~~~~iRi~~~~~~~~l~~al~~l~~ 383 (387)
T PRK08960 309 -GFGIAVEPQGAFYLYADISAFG----GDAFAFCRHFLETEHVAFTPGLDFGRHQAGQHVRFAYTQSLPRLQEAVERIAR 383 (387)
T ss_pred -CCcCCcCCCeeEEEEEeccccC----CCHHHHHHHHHHhCCEEEcCchHhCCCCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 6653447899999999987421 25678888888889999999999975 479999998888999999999998
Q ss_pred HHH
Q 014769 411 FCQ 413 (419)
Q Consensus 411 ~~~ 413 (419)
+++
T Consensus 384 ~~~ 386 (387)
T PRK08960 384 GLR 386 (387)
T ss_pred HHh
Confidence 764
No 16
>PRK07681 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-52 Score=399.83 Aligned_cols=373 Identities=22% Similarity=0.317 Sum_probs=312.3
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
++.....+..+..+.....+ . +..++++|+|+.|+|. +++++.+++++.+.+.......|+ +.|..+||++|+
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia 79 (399)
T PRK07681 7 TRMKAFQSSIFSELGAYKKE-K-IAAGHKMIDLSIGNPD----MPPADFVREEMVHTANQKESYGYT-LSGIQEFHEAVT 79 (399)
T ss_pred HHHhhcCccHHHHHHHHHHH-h-hhcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHH
Confidence 33444445555555543322 2 2237789999999864 456788889988877654334565 479999999999
Q ss_pred HHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 95 DYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 95 ~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
+|+.+.+|..+++ ++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++++++++|.+|++++
T Consensus 80 ~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l 159 (399)
T PRK07681 80 EYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELI 159 (399)
T ss_pred HHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhcCCEEEEEecCCCCCCcCCHHHH
Confidence 9999988988998 899999999999999999999999999999999999999999999999999997776788999999
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCC
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISK 252 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK 252 (419)
++++.++++++++++||||||.+++.+++++|+++|++++++||+||+|.++.+++....++..+.. .+++|+++||||
T Consensus 160 ~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 239 (399)
T PRK07681 160 PEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSK 239 (399)
T ss_pred HHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChhhCCCCcccEEEEeeccc
Confidence 9888778899999999999999999999999999999999999999999999887655445444433 357899999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
.|+++|+|+||+++++ ++++.+..... ..++++.+.|.++..+++.. ..++++.++.++++++.+.+.|+
T Consensus 240 ~~~~~GlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~ 310 (399)
T PRK07681 240 SYSLAGSRIGYMIGNE--------EIVRALTQFKSNTDYGVFLPIQKAACAALRNG-AAFCEKNRGIYQERRDTLVDGFR 310 (399)
T ss_pred ccCCccceeEEEecCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 57888876653 35678889999999999764 36888888999999999999999
Q ss_pred cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
++ ++. +..|.+|+|+|++++.. .++.+++.++++++||.+.||..|+. ++++||+++.+++++++++++|+
T Consensus 311 ~~-g~~-~~~p~~g~f~~~~l~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~l~~l~ 383 (399)
T PRK07681 311 TF-GWN-VDKPAGSMFVWAEIPKG-----WTSLSFAYALMDRANVVVTPGHAFGPHGEGFVRIALVQDEEVLQQAVENIR 383 (399)
T ss_pred HC-CCc-ccCCCeeeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 87 776 55789999999999742 25678888998879999999998875 47999999988899999999998
Q ss_pred H
Q 014769 410 A 410 (419)
Q Consensus 410 ~ 410 (419)
+
T Consensus 384 ~ 384 (399)
T PRK07681 384 N 384 (399)
T ss_pred H
Confidence 7
No 17
>PRK08068 transaminase; Reviewed
Probab=100.00 E-value=1.5e-52 Score=397.90 Aligned_cols=376 Identities=22% Similarity=0.347 Sum_probs=310.2
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++..+.....+..+...+. ... ..++++|+|+.|+|. ++.++.+.+++.+.+.......|++..|.++||+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~ai 79 (389)
T PRK08068 6 SELLKQLPKQFFASLVAKVN-KKV-AEGHDVINLGQGNPD----QPTPEHIVEALQEAAENPANHKYSPFRGYPFLKEAA 79 (389)
T ss_pred hhHhhhcCccHHHHHHHHHH-HHH-hcCCCeEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence 34455555556665555332 222 236679999999864 455677889988887765566899889999999999
Q ss_pred HHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 94 ADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 94 a~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
++|+.+.+|..++++ +|++|+|+++++..++.+++++||+|++++|+|+.+...++..|++++.++++++.++.+|+++
T Consensus 80 a~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~~~~~~~~d~~~ 159 (389)
T PRK08068 80 ADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYTK 159 (389)
T ss_pred HHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEeecccccCCCCCHHH
Confidence 999998888888998 8999999999999999999999999999999999999999999999999998766678899999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc-cCCCCcEEEEecCC
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL-FGSIVPVITLGSIS 251 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~s 251 (419)
+++.+.++++++++++||||||.++|.+++++|+++|+++++++|+||+|..+.+++....++.. .+..+++++++|||
T Consensus 160 l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~S 239 (389)
T PRK08068 160 IPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLS 239 (389)
T ss_pred HHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecch
Confidence 99988778899999999999999999999999999999999999999999998886533333322 23345789999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
|.|+++|+|+||++++. ++++.+...... ..+.+++.|.++..++... .+++++.+++++++++.+.+.|
T Consensus 240 K~~g~~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~~~~~L 310 (389)
T PRK08068 240 KTFNMAGWRVAFAVGNE--------SVIEAINLLQDHLFVSLFGAIQDAAIEALLSD-QSCVAELVARYESRRNAFISAC 310 (389)
T ss_pred hccCCccceeEeEecCH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999864 678888766532 3344556777777777642 4788899999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l 408 (419)
+++ ++. +..|.+|+|+|++++.. .++.++...+++++||.|.||..|+. ++++||+++.+++++.+++++|
T Consensus 311 ~~~-g~~-~~~~~g~~~~~v~~~~~-----~~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l 383 (389)
T PRK08068 311 REI-GWE-VDAPKGSFFAWMPVPKG-----YTSEQFADLLLEKAHVAVAPGNGFGEHGEGYVRVGLLTDEERLREAVERI 383 (389)
T ss_pred HHC-CCc-ccCCCeeEEEEEECCCC-----CCHHHHHHHHHHhCCEEEecchHhCccCCCeEEEEEcCCHHHHHHHHHHH
Confidence 988 776 55789999999999742 25678888887778999999998875 5799999988889999999998
Q ss_pred HHH
Q 014769 409 KAF 411 (419)
Q Consensus 409 ~~~ 411 (419)
+++
T Consensus 384 ~~~ 386 (389)
T PRK08068 384 GKL 386 (389)
T ss_pred HHh
Confidence 763
No 18
>PTZ00377 alanine aminotransferase; Provisional
Probab=100.00 E-value=1.3e-52 Score=407.12 Aligned_cols=399 Identities=21% Similarity=0.335 Sum_probs=310.8
Q ss_pred CchhhhhCCchhHHHHH---HHHHHhhhcC----CCCCeeeccCCCCCCCC------------CCCC-------------
Q 014769 13 DKQEHKAAPAVTVKTSL---ASIIDSVNKN----DPRPVVPLGYGDPTAFP------------CFRT------------- 60 (419)
Q Consensus 13 ~~~~~~~~~~~~i~~~~---~~~~~~~~~~----~~~~~i~l~~g~~~~~~------------~~~~------------- 60 (419)
+++++.+.+.+....+. .++.+++.+. .+.++|+|++|+|.... .+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~vi~~~~G~p~~~~~~~~~~~~~~~~~~~~p~~i~~~~~~~~~ 89 (481)
T PTZ00377 10 INPRVVAAEYAVRGLVPARAAEIKEELKTGKGKYPFDSIVYCNIGNPQALGQKPLTFYRQVLSLVEYPFLLEDPSVSSLF 89 (481)
T ss_pred cCHHHhhhhhhcCChHHHHHHHHHHHHhcCCccCCcceeEEcCCCChhhcCCCCchHHHHHHHHccChhhhcCccccccC
Confidence 44555555555444443 3333323232 46899999999984100 0111
Q ss_pred hHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEee
Q 014769 61 AVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLP 137 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~ 137 (419)
|..+.+++.+.++.. ....|+++.|.++||++|++++.+.+|..+++++|++|+|+++++..++++++ ++||.|+++
T Consensus 90 P~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~ 169 (481)
T PTZ00377 90 PADVVARAKEYLNAIGGGTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIP 169 (481)
T ss_pred CHHHHHHHHHHHHhCCCcccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEEC
Confidence 446667776665542 34579999999999999999999988999999999999999999999999998 799999999
Q ss_pred CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
+|+|+.|...++..|..++.++++++++|.+|++.+++++++ +++++++++|+||||.++|.+++++|+++|++
T Consensus 170 ~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 170 IPQYPLYSAAITLLGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred CCCchhHHHHHHHcCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 999999999999999999999988777899999999998864 67889999999999999999999999999999
Q ss_pred CCCeEEEcccccccccCC-CCCCCcc----ccCC----CCcEEEEecCCCc-CCCCCceeEEEEeeC-CCCccchhhHHH
Q 014769 212 LRVMVVADEVYGHLTFGS-IPYTPMG----LFGS----IVPVITLGSISKR-WLVPGWRFGWLVTND-PNGIFQKSGIID 280 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~-~~~~~~~----~~~~----~~~~i~~~s~sK~-~~~~G~r~G~~~~~~-~~~~~~~~~~~~ 280 (419)
++++||+||+|..+.|++ ..+.++. .+.. ..++++++||||. ++++|+|+||+++.+ + +++++
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p------~~li~ 323 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIP------PEVRE 323 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCC------HHHHH
Confidence 999999999999998853 3333332 1222 1368999999997 588999999998731 1 15788
Q ss_pred HHHhhhccccCCchHHHHHHHHHHccc---c---hHH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEee
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKT---K---EDF---FCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVK 351 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~---~---~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~ 351 (419)
.+........+++.++|.++..+++.. . ..+ ..+....++++++.+.+.|++++++. +..|++|+|+|++
T Consensus 324 ~l~~~~~~~~~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g~~-~~~p~gg~fl~~~ 402 (481)
T PTZ00377 324 QIYKLASINLCSNVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEGVS-CQPVEGAMYAFPR 402 (481)
T ss_pred HHHHHhheecCCChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-eecCCeeEEEEee
Confidence 887765444568889999999998631 1 123 33334467899999999999888888 5589999999987
Q ss_pred cCc--ccc-----cCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 352 LNP--WLL-----EDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 352 ~~~--~~~-----~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
++. ... .+..++.+++..+++++||.+.||+.|+. .+++|||++.+++++++++++|+++++++.++
T Consensus 403 ~~l~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~~~~~e~l~~~l~rl~~~~~~~~~~ 479 (481)
T PTZ00377 403 IELPEKAIQEAKERGLAPDVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITILPPEEQIEEMVKKIKEFHESFMKK 479 (481)
T ss_pred ccCchhhHHHHHhcCCCcHHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHh
Confidence 642 100 00123456778888999999999999974 46999999988899999999999999988765
No 19
>PRK06348 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.7e-52 Score=395.29 Aligned_cols=371 Identities=23% Similarity=0.421 Sum_probs=309.0
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
.+..+.....++.++.... ..+++|+|+.|+|. +++++.+.+++.+.+... ...|+++.|.+++|++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia 76 (384)
T PRK06348 8 KKYQQMEVNIMAEIATLAK------KFPDIIDLSLGDPD----LITDESIINAAFEDAKKG-HTRYTDSGGDVELIEEII 76 (384)
T ss_pred HHHhcCCccHHHHHHHHHH------hcCCcEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence 3444555566666665321 14578999999864 445667766665554433 458999999999999999
Q ss_pred HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769 95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (419)
+++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|..++.+++.+++++.+|++.++
T Consensus 77 ~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~ 156 (384)
T PRK06348 77 KYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQIEMVGGKPIILETYEEDGFQINVKKLE 156 (384)
T ss_pred HHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEecCCcCcCCcCCHHHHH
Confidence 99998889999999999999999999999999999999999999999999999999999998888765667889999999
Q ss_pred HhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCc
Q 014769 175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKR 253 (419)
Q Consensus 175 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~ 253 (419)
++++++++++++++|+||||.++|.+++++|+++|++++++||+||+|.++.+++. ..++..+.. .+++++++||||.
T Consensus 157 ~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~vi~~~SfSK~ 235 (384)
T PRK06348 157 ALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYED-FVPMATLAGMPERTITFGSFSKD 235 (384)
T ss_pred HhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCC-ccchhhcCCCcCcEEEEecchhc
Confidence 99887889999999999999999999999999999999999999999999988653 334444432 4589999999999
Q ss_pred CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
+++||+|+||+++++ ++++.++.... ...+++.+.|.++..++.. ...++++.+..++++++.+.+.|++
T Consensus 236 ~~l~GlRiG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~r~~~~~~~L~~ 306 (384)
T PRK06348 236 FAMTGWRIGYVIAPD--------YIIETAKIINEGICFSAPTISQRAAIYALKH-RDTIVPLIKEEFQKRLEYAYKRIES 306 (384)
T ss_pred cCCccccceeeecCH--------HHHHHHHHHHHhccCCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999965 57777776653 3467788999999988875 3567888889999999999999998
Q ss_pred CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
++++. +..|++|+|+|++++... .++.+++..+++++||.+.||+.|+. .+++||+++.+++++++++++|++
T Consensus 307 ~~~~~-~~~p~gg~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~al~~l~~ 381 (384)
T PRK06348 307 IPNLS-LHPPKGSIYAFINIKKTG----LSSVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLACTVGIEVLEEAFNRIEK 381 (384)
T ss_pred CCCce-eccCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEecCCHHHHHHHHHHHHh
Confidence 87766 558899999999987421 25778888888888999999999975 579999998889999999999976
Q ss_pred H
Q 014769 411 F 411 (419)
Q Consensus 411 ~ 411 (419)
+
T Consensus 382 ~ 382 (384)
T PRK06348 382 M 382 (384)
T ss_pred h
Confidence 4
No 20
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=100.00 E-value=3.9e-52 Score=396.06 Aligned_cols=369 Identities=24% Similarity=0.371 Sum_probs=305.4
Q ss_pred hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
.+.+...+..+.+ ..+...+..|.++|+|+.|+|. +++++.+++++.+.+. ....|+++.|.++||++|++|+
T Consensus 6 ~~~~~~~~~~~~~-~~~~~~~~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~~ia~~~ 78 (396)
T PRK09147 6 DRLQPYPFEKLRA-LFAGVTPPADLPPISLSIGEPK----HPTPAFIKDALAANLD--GLASYPTTAGLPALREAIAAWL 78 (396)
T ss_pred hcCCcchHHHHHH-HHHhhhhccCCCeEecCCCCCC----CCCCHHHHHHHHHHhh--hhcCCCCCCCCHHHHHHHHHHH
Confidence 3444445544443 3333334458999999999964 5567888898887764 3468999999999999999999
Q ss_pred HhhCCCC-CCCC-cEEEcccHHHHHHHHHHHhcCC---CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 98 SRDLPYK-LSAD-DVYVTLGCKQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 98 ~~~~~~~-~~~~-~i~~t~g~~~al~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
++.+|.. ++++ +|++|+|+++++..++++++++ ||.|++++|+|..+...+...|.+++.++++++++|.+|++.
T Consensus 79 ~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~ 158 (396)
T PRK09147 79 ERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYEGAALLAGAEPYFLNCDPANNFAPDFDA 158 (396)
T ss_pred HHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchHHHHHhcCCEEEEeccCccccCccCHHH
Confidence 9888887 8885 8999999999999999999999 899999999999999999999999999999777778999999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCC-cc---ccC--CCCcEE
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTP-MG---LFG--SIVPVI 245 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~-~~---~~~--~~~~~i 245 (419)
+++.+.++++++++++||||||.++|.+++++|+++|++++++||+||+|..+.|++. ...+ +. ..+ ..++++
T Consensus 159 l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi 238 (396)
T PRK09147 159 VPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLV 238 (396)
T ss_pred HHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEE
Confidence 9888777889999999999999999999999999999999999999999999988653 1111 11 121 236899
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
+++||||.|+++|+|+||+++++ ++++.+..... ...+++.+.|.++.+.+.. .+++.+.++.++++++
T Consensus 239 ~~~S~SK~~~~~GlRiG~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~a~~~~~~~--~~~~~~~~~~~~~~~~ 308 (396)
T PRK09147 239 VFHSLSKRSNVPGLRSGFVAGDA--------ALLKKFLLYRTYHGCAMPPAVQAASIAAWND--EAHVRENRALYREKFD 308 (396)
T ss_pred EEeccccccCCccceeeeecCCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHhcc--hhHHHHHHHHHHHHHH
Confidence 99999999899999999999865 57777776543 2456788888887777753 5788899999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEEEEeec
Q 014769 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLRIAFCA 396 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~Ris~~~ 396 (419)
.+.+.|++. +. +..|++|+|+|++++. ++.+++.++++++||.+.||..|+. .+++||+++.
T Consensus 309 ~~~~~L~~~--~~-~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~ 378 (396)
T PRK09147 309 AVTPILAPV--LD-VQLPDAGFYLWAKVPG-------DDTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA 378 (396)
T ss_pred HHHHHHHHh--cC-CCCCCeeEEEEEECCC-------CHHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC
Confidence 999999874 44 4479999999999872 4678888888889999999998852 4799999988
Q ss_pred CHHHHHHHHHHHHHHHH
Q 014769 397 EPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~ 413 (419)
+++++++++++|+++++
T Consensus 379 ~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 379 PLAECVEAAERIVDFCR 395 (396)
T ss_pred CHHHHHHHHHHHHHHhc
Confidence 89999999999998774
No 21
>PRK08636 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-51 Score=393.36 Aligned_cols=377 Identities=20% Similarity=0.324 Sum_probs=305.7
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 014769 20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSR 99 (419)
Q Consensus 20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 99 (419)
.....+..+.. ....+++ .+.++++|+.|+|. .+.++.+.+++.+.+.......|+++.|..+||+++++|+++
T Consensus 13 ~~~~~~~~~~~-~~~~~~~-~~~~~~~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~ 86 (403)
T PRK08636 13 LPKYVFAEVNE-LKMAARR-AGEDIIDFSMGNPD----GPTPQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKR 86 (403)
T ss_pred CCccHHHHHHH-HHHHHHh-cCCCEEEcCCcCCC----CCCCHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHH
Confidence 33334444443 3333332 46789999999875 233555666666665544456899999999999999999999
Q ss_pred hCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH----H
Q 014769 100 DLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV----E 174 (419)
Q Consensus 100 ~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l----~ 174 (419)
.+|..++++ +|++|+|+++++..++++++++||+|++++|+|+.+...++..|.+++.++++.++++++|++.+ +
T Consensus 87 ~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~ 166 (403)
T PRK08636 87 KYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDQFFENLE 166 (403)
T ss_pred HhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCEEEEEeccccccCccChhhhhhHHH
Confidence 889889998 79999999999999999999999999999999999999999999999999886555678997754 4
Q ss_pred Hhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC-CcEEEEecC
Q 014769 175 ALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSI 250 (419)
Q Consensus 175 ~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~ 250 (419)
++++ .+++.+++++||||||.++|.+++++|+++|++++++||+||+|..+.+++...+++..++.. +.+++++||
T Consensus 167 ~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~ 246 (403)
T PRK08636 167 KALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTL 246 (403)
T ss_pred HHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCCChhcCCCccccEEEEEec
Confidence 5443 367888999999999999999999999999999999999999999998876544555555432 457889999
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
||.|++||+|+||++++. ++++.+...... ..+++.+.|.++..+++. ...++++.++.++++++.+.+.
T Consensus 247 SK~~~~~GlRiG~iv~~~--------~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~ 317 (403)
T PRK08636 247 SKSYNMAGWRVGFVVGNK--------KLVGALKKIKSWLDYGMFTPIQVAATIALDG-DQSCVEEIRETYRKRRDVLIES 317 (403)
T ss_pred ccccCCccceeeeeeCCH--------HHHHHHHHHHHHhcccCChHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999865 577777766532 356677788888777753 3578888999999999999999
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~ 407 (419)
|++. ++. +..|.+|+|+|+++++... ..++.+++.++++++||.+.||..|+. .+|+||+++.+++++++++++
T Consensus 318 L~~~-~~~-~~~p~~g~~~~~~l~~~~~--~~~~~~l~~~ll~~~gV~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~~~r 393 (403)
T PRK08636 318 FANA-GWE-LQKPRASMFVWAKIPEPAR--HLGSLEFSKQLLTEAKVAVSPGIGFGEYGDEYVRIALIENENRIRQAARN 393 (403)
T ss_pred HHHC-CCc-ccCCCcceEEEEECCCccC--CCCHHHHHHHHHHhCCEEEecchhhCcCCCCeEEEEecCCHHHHHHHHHH
Confidence 9987 676 5589999999999975210 113678888888889999999999875 589999999889999999999
Q ss_pred HHHHHHHH
Q 014769 408 MKAFCQRH 415 (419)
Q Consensus 408 l~~~~~~~ 415 (419)
|+++++.+
T Consensus 394 l~~~l~~~ 401 (403)
T PRK08636 394 IKKFLKEL 401 (403)
T ss_pred HHHHHHhh
Confidence 99999875
No 22
>PRK06107 aspartate aminotransferase; Provisional
Probab=100.00 E-value=8.5e-52 Score=394.01 Aligned_cols=360 Identities=23% Similarity=0.387 Sum_probs=309.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++++|+.|.|. +++++.+.+++.+.+.... ..|+++.|.+++|+++++++++.+|..+++++|++|+|+++|+
T Consensus 32 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al 106 (402)
T PRK06107 32 GRSIVDLTVGEPD----FDTPDHIKQAAVAAIERGE-TKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAI 106 (402)
T ss_pred cCCEEEcCCCCCC----CCCCHHHHHHHHHHHHcCC-CCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHH
Confidence 6789999999964 4557888999998886543 5799999999999999999998889888999999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++.+++++||+|++++|+|..|...+...+..++.++++.++++.+|++.+++.+.++++++++++|+||||.++|.+
T Consensus 107 ~~~~~~~~~~gd~vl~~~p~y~~y~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~ 186 (402)
T PRK06107 107 FLALMATLEAGDEVIIPAPYWVSYPDMVLANDGTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRA 186 (402)
T ss_pred HHHHHHhcCCCCEEEEecCCCcCHHHHHHHcCCEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHH
Confidence 99999999999999999999999988888888888888876556678999999999887889999999999999999999
Q ss_pred HHHHHHHHHHhC-CCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 201 HLQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 201 ~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
++++|+++|+++ ++++|+||+|+.+.|++...+++..+.. .+++++++||||.|++||+|+||++++. +
T Consensus 187 ~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~~--------~ 258 (402)
T PRK06107 187 ELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGPA--------D 258 (402)
T ss_pred HHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecCH--------H
Confidence 999999999998 9999999999998887655555544432 3579999999999989999999999865 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+..... .+.+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|++++++. +..|++|+|+|++++...
T Consensus 259 ~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~~g~~-~~~p~gg~~~~~~~~~~~ 336 (402)
T PRK06107 259 LIAAINKLQSQSSSCPSSISQAAAAAALNGD-QSFVTESVAVYKQRRDYALALLNAIPGLS-CLVPDGAFYLYVNCAGLI 336 (402)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHhcCCCCc-ccCCCcceEEeeeccccc
Confidence 7888877654 35678999999999999753 57888999999999999999999887777 558999999999884210
Q ss_pred ----ccC--CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 357 ----LED--INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 357 ----~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
..+ ..++.+++.++++++||.+.||..|+..+|+|++++.+++++++++++|++.++++
T Consensus 337 ~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 337 GKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred ccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 001 12567888889899999999999998889999999988999999999999998765
No 23
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=100.00 E-value=9.6e-52 Score=392.07 Aligned_cols=351 Identities=26% Similarity=0.419 Sum_probs=302.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~ 118 (419)
.++++++|+.|+|. +++++.+.+++.+.+.......|+++.|.+++|+++++|+.+.+|..++++ +|++|+|+++
T Consensus 27 ~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~ 102 (383)
T TIGR03540 27 EGVDVISLGIGDPD----LPTPKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKE 102 (383)
T ss_pred cCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHH
Confidence 47899999999864 456788889988877655556899999999999999999998888888876 6999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
++..+++.++++||.|++++|+|+.+...++..|.++..+++++++++.+|++++++.+.++++++++++||||||.+++
T Consensus 103 ~l~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~ 182 (383)
T TIGR03540 103 GIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAP 182 (383)
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCcchHHHHHhcCCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCC
Confidence 99999999999999999999999999999999999999999876667788999999888878999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++++++|+||+|.++.+++...+++..+.. .+++++++||||.|+++|+|+||++++. +
T Consensus 183 ~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~~~--------~ 254 (383)
T TIGR03540 183 LKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNA--------D 254 (383)
T ss_pred HHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeCCH--------H
Confidence 999999999999999999999999998887655555555443 3468999999999999999999999865 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+..... ...+++.+.|.++..++... .+++++.++.++++++.+.+.|+++ ++. +..|.+|+|+|+++++.
T Consensus 255 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~~~~~~l~~~- 330 (383)
T TIGR03540 255 LIAGLGKVKTNVDSGVFQAIQYAAIAALNGP-QDVVKEIRKIYQRRRDLLLEALKKI-GID-VEKPKATFYVWVPVPEG- 330 (383)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-ecCCCcceEEEEECCCC-
Confidence 7777776543 24566778899998888764 5788888999999999999999988 777 55788999999999742
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.++.+++.++++++||.+.||..|+. ++++||+++.+++++++++++|++
T Consensus 331 ----~~~~~~~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 331 ----YTSAEFAARLLEETGVVVTPGVGFGEYGEGYIRISLTVPDERLEEAVARIKK 382 (383)
T ss_pred ----CCHHHHHHHHHHHCCEEEecchhhCccCCCeEEEEecCCHHHHHHHHHHHhh
Confidence 25778888888889999999999875 479999999888999999998864
No 24
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=100.00 E-value=1.7e-51 Score=390.73 Aligned_cols=351 Identities=25% Similarity=0.400 Sum_probs=301.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~ 118 (419)
.+.++++|+.|+|. +++++.+.+++.+.+.......|+++.|.+++|+++++|+++.+|..++++ +|++|+|+++
T Consensus 29 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~ 104 (385)
T PRK09276 29 RGVDVISLGIGDPD----LPTPDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKE 104 (385)
T ss_pred cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 37789999999864 456788899998887654456899999999999999999998888888887 5999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
++..++.+++++||+|++++|+|+.+...++..|.+++.++++.+.++.+|++.+++.+.++++++++++|+||||.++|
T Consensus 105 ~i~~~~~~~~~~gd~Vl~~~P~y~~~~~~~~~~g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (385)
T PRK09276 105 GIAHIPLAFVNPGDVVLVPDPGYPVYKIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVAD 184 (385)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcChHHHHHHcCCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999999876667888999998888778899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++++++|+||+|..+.+++....++..++. .+++++++||||.|+++|+|+||+++++ +
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~~~--------~ 256 (385)
T PRK09276 185 LEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNA--------D 256 (385)
T ss_pred HHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeCCH--------H
Confidence 999999999999999999999999999887655555555543 3568999999999999999999999865 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+..... ...+.+.+.|.++..++.. ...++++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++..
T Consensus 257 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~v~~~~~- 332 (385)
T PRK09276 257 LIAGLGKVKSNVDSGVFQAIQEAGIAALNG-PQEVVEELRKIYQERRDILVEGLRKL-GLE-VEPPKATFYVWAPVPKG- 332 (385)
T ss_pred HHHHHHHHHhhccCCCCHHHHHHHHHHHcC-cHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEEECCCC-
Confidence 7777776543 3445677788888888864 35788899999999999999999987 776 55788999999999742
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.+..+++.++++++||.+.||..|+. ++++||+++.+++++.+++++|.+
T Consensus 333 ----~~~~~l~~~ll~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 333 ----YTSAEFATLLLDKAGVVVTPGNGFGEYGEGYFRIALTVPDERIEEAVERIKK 384 (385)
T ss_pred ----CCHHHHHHHHHHhCCEEECCchhhCCCCCCeEEEEeCCCHHHHHHHHHHHhh
Confidence 25778888888888999999998875 479999999888999999999864
No 25
>PRK05942 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2e-51 Score=390.64 Aligned_cols=353 Identities=23% Similarity=0.366 Sum_probs=299.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc-EEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~g~~~ 118 (419)
.|.++|+|+.|+|. .++++.+.+++.+.+.......|+++.|.++||+++++|+++.+|..+++++ |++|+|+++
T Consensus 33 ~g~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~ 108 (394)
T PRK05942 33 QGLDLIDLGMGNPD----GAAPQPVIEAAIAALADPQNHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKE 108 (394)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHH
Confidence 47789999999865 3445667777766665444568999999999999999999988888888884 899999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
++..++.+++++||+|++++|+|+.+...+...|.+++.++++.+++|.+|++++++.+.++++++++++|+||||.++|
T Consensus 109 al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s 188 (394)
T PRK05942 109 GLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAP 188 (394)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCC
Confidence 99999999999999999999999999888889999999999876667889999999988888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++++++|+||+|..+.+++....++..+.. .+.+++++||||.|+++|+|+||++++. +
T Consensus 189 ~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~~--------~ 260 (394)
T PRK05942 189 REFFEEIVAFARKYEIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR--------H 260 (394)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecCH--------H
Confidence 999999999999999999999999999887654445444432 3457889999999999999999999864 6
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.++.... ...+++.+.|.++..+++. ..+++++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++..
T Consensus 261 l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~~~~f~~~~~~~~- 336 (394)
T PRK05942 261 IIQGLRTLKTNLDYGIFSALQKAAETALQL-PDSYLQQVQERYRTRRDFLIQGLGEL-GWN-IPPTKATMYLWVPCPVG- 336 (394)
T ss_pred HHHHHHHHHhhcccCCCHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCeeeEEEEECCCC-
Confidence 7888876653 3456788889999999874 35788889999999999999999887 676 55788999999999742
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
.++.+++.++++++||.+.||..|+. .+|+|++++.+.+.+.+++++|.++-
T Consensus 337 ----~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~ 390 (394)
T PRK05942 337 ----MGSTDFALNVLQKTGVVVTPGNAFGEGGEGYVRISLIADCDRLGEALDRLKQAG 390 (394)
T ss_pred ----CCHHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEecCCHHHHHHHHHHHHHhh
Confidence 25677888888889999999998864 57999999877889999999987653
No 26
>PRK09148 aminotransferase; Validated
Probab=100.00 E-value=2.8e-51 Score=390.24 Aligned_cols=360 Identities=21% Similarity=0.355 Sum_probs=301.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~ 118 (419)
.+.++|+|+.|+|. +++++.+.+++.+.+.......|+++.|.++||+++++++.+++|..++++ +|++|+|+++
T Consensus 28 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~ 103 (405)
T PRK09148 28 AGADIIDLGMGNPD----LPTPQHIVDKLCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKE 103 (405)
T ss_pred cCCCeEEcCCCCCC----CCCCHHHHHHHHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHH
Confidence 37789999999864 455778888888877554556899999999999999999998888888887 8999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
++..++.+++++||+|++++|+|+.+...+...|.++..++++.++++..+++...+...++++.+++++||||||.++|
T Consensus 104 al~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s 183 (405)
T PRK09148 104 GFANMAQAITAPGDVILCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVAD 183 (405)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCcccHHHHHhcCCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCC
Confidence 99999999999999999999999999989999999999999876555544555544444457889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++++++|+||+|..+.|++...+++..+.. .+++++++||||.|++||+|+||++++. +
T Consensus 184 ~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~~~--------~ 255 (405)
T PRK09148 184 LDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVGNE--------R 255 (405)
T ss_pred HHHHHHHHHHHHHcCeEEEEeccchhhhcCCCCCCChhhCCCccCcEEEEeccccccCCcchheeeeeCCH--------H
Confidence 999999999999999999999999999887654444544432 3457889999999999999999999865 6
Q ss_pred HHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+...... ..+++.+.|.++..+|+.. ..++++.+..++++++.+.+.|+++ ++. +..|++|+|+|++++...
T Consensus 256 ~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~-~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~f~~~~l~~~~ 332 (405)
T PRK09148 256 LIAALTRVKSYLDYGAFTPIQVAATAALNGP-QDCIAEMRELYKKRRDVLVESFGRA-GWD-IPPPAASMFAWAPIPEAF 332 (405)
T ss_pred HHHHHHHHHHHhccCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cCCCCeeEEEEEECCCcc
Confidence 78888776543 4567888999999999752 5788889999999999999999987 666 547899999999987421
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
. ..+..++...+++++||.|.||..|+. .+|+||+++.+++++.+++++|.+++.++.
T Consensus 333 ~--~~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 333 R--HLGSLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIALVENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred C--CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHH
Confidence 0 013567888888889999999999875 579999998889999999999999998763
No 27
>PRK08361 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-51 Score=391.85 Aligned_cols=383 Identities=23% Similarity=0.399 Sum_probs=319.0
Q ss_pred ccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCC
Q 014769 7 NKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGI 86 (419)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~ 86 (419)
|+.+-+.+.+..+.....++.+.+... ..+++|+|+.|+|. +++++.+.+++.+.+... ...|.+..|.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~ 72 (391)
T PRK08361 4 KKRKYFIAGRINLIQRSKIRELFERAS------KMENVISLGIGEPD----FDTPKNIKEAAKRALDEG-WTHYTPNAGI 72 (391)
T ss_pred cccccchhHHHHhCCccHHHHHHHHHH------hhcCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCc
Confidence 344445555565556666666554321 13578999999965 445788889988877654 3479888999
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (419)
+++|+++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...+...|.+++.+++++++++
T Consensus 73 ~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~ 152 (391)
T PRK08361 73 PELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENEF 152 (391)
T ss_pred HHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccHHHHHHcCCEEEEEecCCccCC
Confidence 99999999999988888899999999999999999999999999999999999999999999999999999998776678
Q ss_pred ccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246 (419)
Q Consensus 167 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (419)
.+|++.+++.++++++++++++|+||||.++|.+++++|+++|+++++++|+||+|.++.+++....++..+. .+++++
T Consensus 153 ~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~~i~ 231 (391)
T PRK08361 153 QPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYA-PDNTIL 231 (391)
T ss_pred CCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcC-CCCEEE
Confidence 8999999999988889999999999999999999999999999999999999999999887654444443333 247899
Q ss_pred EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAE 324 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~ 324 (419)
++||||.|+++|+|+||+++++ ++++.+..... ..++++.+.|.++..+++... .+++++.+++++++++
T Consensus 232 ~~s~SK~~~~~GlRiG~~~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 303 (391)
T PRK08361 232 ANSFSKTFAMTGWRLGFVIAPE--------QVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRKEYNERRK 303 (391)
T ss_pred EecCchhcCCcHhhhhhhccCH--------HHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHH
Confidence 9999999999999999999965 57777765543 346678889999999997643 3578899999999999
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHH
Q 014769 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALK 402 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~ 402 (419)
.+.+.|++++++. +..|++|+|+|++++... .++.+++..+++++||.+.||..|+. ++++||+++.++++++
T Consensus 304 ~~~~~L~~~~~~~-~~~p~g~~~~~~~l~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~ 378 (391)
T PRK08361 304 LVLKRLKEMPHIK-VFEPKGAFYVFANIDETG----MSSEDFAEWLLEKARVVVIPGTAFGKAGEGYIRISYATSKEKLI 378 (391)
T ss_pred HHHHHHHhCCCCe-ecCCCEEEEEEEECCCCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCEEEEEecCCHHHHH
Confidence 9999999887877 558899999999997421 25778888887888999999998875 5799999988889999
Q ss_pred HHHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQR 414 (419)
Q Consensus 403 ~~l~~l~~~~~~ 414 (419)
+++++|++++++
T Consensus 379 ~al~~l~~~l~~ 390 (391)
T PRK08361 379 EAMERMEKALEE 390 (391)
T ss_pred HHHHHHHHHHhc
Confidence 999999998865
No 28
>PRK07337 aminotransferase; Validated
Probab=100.00 E-value=3.5e-51 Score=388.70 Aligned_cols=378 Identities=20% Similarity=0.387 Sum_probs=311.1
Q ss_pred hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (419)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (419)
+........++.+.... .++. ..++++++|+.|.|. +++++.+.+++.+.+... ...|+++.|.+++|+++++
T Consensus 6 ~~~~~~~~~~~~~~~~~-~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~ 78 (388)
T PRK07337 6 RVDAIEPFYVMELAKEA-QALE-RAGRDIIHMGIGEPD----FTAPEPVVEAAARALRRG-VTQYTSALGLAPLREAIAA 78 (388)
T ss_pred HhHhcCchHHHHHHHHH-HHHH-hcCCCEEEeCCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHH
Confidence 33444455555555433 3332 247789999999864 455688888888887643 3579998999999999999
Q ss_pred HHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH
Q 014769 96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA 175 (419)
Q Consensus 96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (419)
|+++.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+.+...++..|.+++.++++.++++.+|++++++
T Consensus 79 ~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 158 (388)
T PRK07337 79 WYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTAADVEA 158 (388)
T ss_pred HHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCcCCHHHHHh
Confidence 99988898899999999999999999999999999999999999999999889999999999998766678899999999
Q ss_pred hhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769 176 LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 176 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
.+.++++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.+++.. .+...+ .+++++++||||.|+
T Consensus 159 ~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~-~~~~~~--~~~vi~~~S~SK~~~ 235 (388)
T PRK07337 159 AWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAP-VSALSL--GDDVITINSFSKYFN 235 (388)
T ss_pred hcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCC-cChhhc--cCCEEEEEechhhcC
Confidence 99888999999999999999999999999999999999999999999998876542 222222 356899999999999
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
++|+|+||+++++ ++++.+.... ....+.+.+.|.++..++.....+++.+.+..++++++.+.+.|+++
T Consensus 236 ~~G~RiG~~~~~~--------~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~- 306 (388)
T PRK07337 236 MTGWRLGWLVVPE--------ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL- 306 (388)
T ss_pred CchhheeeeecCH--------HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999999865 5777777665 33456788899998888875444567788899999999999999987
Q ss_pred CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
++.+...|++|+|+|++++.....+..++.+++.++++++||.|.||..|+. .+|+||+++.+++++++++++|.++
T Consensus 307 ~~~~~~~p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~Ri~~~~~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 307 GFKVPVMPDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDFGPHAPRDYIRLSYATSMSRLEEAVARLGKL 386 (388)
T ss_pred CCccccCCCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhhCCCCCCCEEEEEecCCHHHHHHHHHHHHHH
Confidence 6653347899999999997421111125678888888889999999999975 5799999988899999999999987
Q ss_pred H
Q 014769 412 C 412 (419)
Q Consensus 412 ~ 412 (419)
+
T Consensus 387 l 387 (388)
T PRK07337 387 F 387 (388)
T ss_pred h
Confidence 5
No 29
>PRK09265 aminotransferase AlaT; Validated
Probab=100.00 E-value=8.5e-51 Score=387.65 Aligned_cols=393 Identities=24% Similarity=0.405 Sum_probs=308.1
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
+.....++..+..+.. ..+.. +..+.++|+|+.|+|..+ .+++++.+.+++.+.+.. ...|+++.|.++||++++
T Consensus 8 ~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~i~l~~g~p~~~-~~~~~~~i~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia 82 (404)
T PRK09265 8 SKLENVCYDIRGPVLK-EAKRL-EEEGHKILKLNIGNPAPF-GFEAPDEILRDVIRNLPT--AQGYSDSKGLFSARKAIM 82 (404)
T ss_pred HHHHhcCcchhHHHHH-HHHHH-HHcCCCeEEecCCCCCcC-CCCCCHHHHHHHHHHhhc--CCCCCCCCCcHHHHHHHH
Confidence 3333444443333333 33333 345889999999998754 356778888888776643 357999999999999999
Q ss_pred HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769 95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (419)
+++.+....++++++|++|+|+++++..++.+++++||+|++++|+|..+...+...|..++.++++.+.++.+|++.++
T Consensus 83 ~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~ 162 (404)
T PRK09265 83 QYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIR 162 (404)
T ss_pred HHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHHHHHHcCCEEEEEecccccCCCCCHHHHH
Confidence 99986544478999999999999999999999999999999999999999999998999988888765556789999999
Q ss_pred HhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769 175 ALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW 254 (419)
Q Consensus 175 ~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 254 (419)
+++.++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.|++....++..+....++++++||||.|
T Consensus 163 ~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~ 242 (404)
T PRK09265 163 SKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAY 242 (404)
T ss_pred HhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhc
Confidence 99888889999999999999999999999999999999999999999999988765555555555445789999999999
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
++||+|+||++++.+..+. ..+++.+........+++.++|.++..+|..... +.+.+..+++.++++.+.+.|+++
T Consensus 243 ~~pGlRiG~~v~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 320 (404)
T PRK09265 243 RVAGFRVGWMVLSGPKKHA--KGYIEGLDMLASMRLCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAI 320 (404)
T ss_pred cCcccceEEEEEeCchHHH--HHHHHHHHHHhccccCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999975432111 1244444433233456788899999999864221 112222346778889999999888
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+++. +..|++|+|+|++++.... +..++.+++.+++.++||.|.||..|+. ++++|++++.+++++++++++|+++
T Consensus 321 ~~~~-~~~p~~g~~l~~~~~~~~~-~~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~~~~~e~l~~~l~rl~~~ 398 (404)
T PRK09265 321 PGVS-CVKPKGALYAFPKLDPKVY-PIHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVTLPRVDDLEEAIGRIGRF 398 (404)
T ss_pred CCCc-ccCCCcceEEEEEeccccc-CCCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEeCCCHHHHHHHHHHHHHH
Confidence 7877 5589999999999875211 1124566677778899999999999863 6899999988899999999999999
Q ss_pred HHHHh
Q 014769 412 CQRHT 416 (419)
Q Consensus 412 ~~~~~ 416 (419)
++.+.
T Consensus 399 l~~~~ 403 (404)
T PRK09265 399 LSGYR 403 (404)
T ss_pred HHHhc
Confidence 98653
No 30
>PRK07682 hypothetical protein; Validated
Probab=100.00 E-value=3.5e-51 Score=387.58 Aligned_cols=353 Identities=25% Similarity=0.444 Sum_probs=301.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV 120 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al 120 (419)
+++|+|+.|.|. +++++.+.+++.+.+... ...|++..|.+++|+++++++.+.+|..++++ +|++|+|+++++
T Consensus 20 ~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al 94 (378)
T PRK07682 20 EGVISLGVGEPD----FVTPWNVREASIRSLEQG-YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQAL 94 (378)
T ss_pred CCeEEeCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHH
Confidence 578999999975 345667788888877643 45799889999999999999999888888886 799999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++.+++++||+|++++|+|+.+...++..|.+++.++++.++++.+|++.+++++.++++++++++|+||||.++|.+
T Consensus 95 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 95 DVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred HHHHHHhCCCCCEEEEeCCCchhhHHHHHHcCCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHH
Confidence 99999999999999999999999999999999999888876656788999999999988889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
++++|+++|+++++++|+||+|..+.+++. +.++..+.. .+++++++||||.|++||+|+||++++. +++
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~~~-~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~i 245 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYDEA-YTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV--------YFS 245 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccCCC-CCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH--------HHH
Confidence 999999999999999999999999988753 223333322 3579999999999999999999999865 577
Q ss_pred HHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 280 DSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 280 ~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
+.+...... ..+++.+.|.++..+|+.. ..++++.++.++++++.+.+.|+++ ++. +..|++|+|+|+.++...
T Consensus 246 ~~l~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~g~~~~~~~~~~~~-- 320 (378)
T PRK07682 246 EAMLKIHQYSMMCAPTMAQFAALEALRAG-NDDVIRMRDSYRKRRNFFVTSFNEI-GLT-CHVPGGAFYAFPSISSTG-- 320 (378)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-cCCCCeeEEEEEeccCCC--
Confidence 877765432 4567888999999999764 3568888999999999999999988 777 558899999999885321
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.++.+++.++++++||.+.||..|+. ++++||+++.+++++++++++|+++++++
T Consensus 321 --~~~~~~~~~ll~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 321 --LSSEEFAEQLLLEEKVAVVPGSVFGESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred --CCHHHHHHHHHHhCCEEEcCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 25778888888788999999998875 58999999888999999999999998764
No 31
>PRK06108 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-51 Score=385.90 Aligned_cols=353 Identities=28% Similarity=0.461 Sum_probs=302.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.+++|+|+.|+|. +++++.+.+++.+.+.+.. ..|+++.|.+++|+++++++.+.+|..+++++|++|+|+++++
T Consensus 23 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al 97 (382)
T PRK06108 23 REGVLPLWFGESD----LPTPDFIRDAAAAALADGE-TFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQAL 97 (382)
T ss_pred cCCeEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHH
Confidence 4578999999964 5667899999998877643 4699999999999999999998888889999999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
..++.+++++||+|++++|+|..+...++..|.+++.++++.+ .+|.+|++.+++.++++++++++++|+||||.+++.
T Consensus 98 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~ 177 (382)
T PRK06108 98 MLAAQALVGPGDEVVAVTPLWPNLVAAPKILGARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASR 177 (382)
T ss_pred HHHHHHhcCCCCEEEEeCCCccchHHHHHHCCCEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCH
Confidence 9999999999999999999999999999999999999998653 457799999999988788999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccC-CCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFG-SIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
+++++|+++|+++|+++|+||+|..+.++ +...+++..+ ...+++++++||||.|+++|+|+||+++++ +
T Consensus 178 ~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~--------~ 249 (382)
T PRK06108 178 DDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP--------A 249 (382)
T ss_pred HHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH--------H
Confidence 99999999999999999999999999886 3333332232 234579999999999999999999999865 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+..... ...+++.+.|.++..++... .+++++.+++++++++.+.+.|++++++. +..|++|+|+|++++..
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~~g~~~~~~l~~~- 326 (382)
T PRK06108 250 LGQVLEKLIEYNTSCVAQFVQRAAVAALDEG-EDFVAELVARLRRSRDHLVDALRALPGVE-VAKPDGAMYAFFRIPGV- 326 (382)
T ss_pred HHHHHHHHHHhcccCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCCC-
Confidence 7777766543 24567888999999999764 56788889999999999999998887887 55789999999998742
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.+..+++.++++++||.+.||..|+. .+++|++++.+++++++++++|+++++
T Consensus 327 ----~~~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 327 ----TDSLALAKRLVDEAGLGLAPGTAFGPGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred ----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 25678888888889999999998864 589999998899999999999998875
No 32
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-52 Score=368.71 Aligned_cols=349 Identities=27% Similarity=0.425 Sum_probs=301.1
Q ss_pred ccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHH
Q 014769 47 LGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILS 125 (419)
Q Consensus 47 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~ 125 (419)
|+.|.| ++++|+.+.+++.+++.....++|....|.++|+++|++.+...+|....++ +|++|.|+.+++..+++
T Consensus 36 LgqGfp----~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFP----DFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCC----CCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHHHHHHHH
Confidence 999985 5788999999999999887788999999999999999999999887776664 69999999999999999
Q ss_pred HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc------CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 126 VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL------PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 126 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
.++++||+|++.+|.|..|....++.|..++.++.. ...+|.+|.+.++.++.++|++|++++||||||.+++.
T Consensus 112 ~l~~~GDeVii~eP~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntPhNPtGkvfsR 191 (420)
T KOG0257|consen 112 GLLNPGDEVIVFEPFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTPHNPTGKVFSR 191 (420)
T ss_pred HHcCCCCEEEEecCcchhhhhHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCCCCCcCcccCH
Confidence 999999999999999999999999999999999987 45678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
++|++|+++|++||+++|+||+|..+.|++..+..+..+ +..++++.++|+||+|++.|||+||++.+. .+
T Consensus 192 eeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~--------~L 263 (420)
T KOG0257|consen 192 EELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPK--------HL 263 (420)
T ss_pred HHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeeeeeeeeeechH--------Hh
Confidence 999999999999999999999999999998755555443 556689999999999999999999999954 35
Q ss_pred HHHHHhhh-ccccCCchHHHHHHHHHHcccch-------HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769 279 IDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-------DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV 350 (419)
Q Consensus 279 ~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 350 (419)
...++... +..+..+++.|.|.+.++..... .+..++...++++++.+.+.|.++ |+. +..|++++|+|+
T Consensus 264 ~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l-g~~-v~~p~gayyl~a 341 (420)
T KOG0257|consen 264 YSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL-GLK-VTGPEGAYYLWA 341 (420)
T ss_pred hhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc-CCc-cccCCCceEEEE
Confidence 56666553 44567788888888777765321 345558999999999999999999 998 669999999999
Q ss_pred ecCccc-------ccCCCCHHHHHHHHHHhcCeEeecCCCCCCC-------CeEEEEeecCHHHHHHHHHHHH
Q 014769 351 KLNPWL-------LEDINDDIEFALKLAKEESVIVTPGIYVGLK-------NWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 351 ~~~~~~-------~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~-------~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
+++... .....++..+..+++++.|+.+.|++.|+.+ +.+|++++.+.+.++.++++++
T Consensus 342 dfs~~~~~~~~~~~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k~~~~L~~a~e~l~ 414 (420)
T KOG0257|consen 342 DFSLAKSWPFFEEILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCKADETLRKAIERLK 414 (420)
T ss_pred eccccccCCcchhhccCCCceeeehhhhccCcEEEeCchhcCCchhhHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 998210 1112356778999999999999999999974 4677777888899999999988
No 33
>PRK07324 transaminase; Validated
Probab=100.00 E-value=2.7e-51 Score=386.15 Aligned_cols=347 Identities=26% Similarity=0.391 Sum_probs=299.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.+.++++|+.|+|. ++.++.+ +++.+++..... .|+++.|.++||++|++++. ++++++|++|+|++++
T Consensus 24 ~~~~~~~~~~~e~~----~~~~~~~-~~~~~~~~~~~~-~Y~~~~G~~~lr~~ia~~~~-----~~~~~~vi~t~G~~~a 92 (373)
T PRK07324 24 AESCIDSLTLEELL----ALAGKNP-EAFYQELGQKKL-TYGWIEGSPEFKEAVASLYQ-----NVKPENILQTNGATGA 92 (373)
T ss_pred ccCCCCCCcHHHHH----hccCcch-HHHHHHHhcCCc-cCCCCCCCHHHHHHHHHHhc-----CCChhhEEEcCChHHH
Confidence 48899999999864 4555666 777777766544 89999999999999999984 3678999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.+++++||+|+++.|+|..+...++..|.+++.++++++++|.+|++.++++++++++++++++|+||||.+++.
T Consensus 93 l~~~~~~l~~~gd~Vl~~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~ 172 (373)
T PRK07324 93 NFLVLYALVEPGDHVISVYPTYQQLYDIPESLGAEVDYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDR 172 (373)
T ss_pred HHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999999999999999999999877778899999999888889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+++|+++|+++|+||+|..+.+++. .+++... .+++|+++||||.|+++|+|+||++++. +++
T Consensus 173 ~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~-~~s~~~~--~~~~I~~~s~SK~~~~~G~RiG~i~~~~--------~li 241 (373)
T PRK07324 173 AYLEEIVEIARSVDAYVLSDEVYRPLDEDGS-TPSIADL--YEKGISTNSMSKTYSLPGIRVGWIAANE--------EVI 241 (373)
T ss_pred HHHHHHHHHHHHCCCEEEEEccccccccCCC-CCChhhc--cCCEEEEecchhhcCCccceeEEEecCH--------HHH
Confidence 9999999999999999999999999887653 3333332 3468999999999999999999999854 578
Q ss_pred HHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 280 DSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 280 ~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
+.++..... +.+++.+.|.++..+++. ...+++++++.++++++.+.+.|++.+++. +..|.+|+++|+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~q~~a~~~l~~-~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~-~~~p~gg~~~~i~~~~~--- 316 (373)
T PRK07324 242 DILRKYRDYTMICAGVFDDMLASLALEH-RDAILERNRKIVRTNLAILDEWVAKEPRVS-YVKPKAVSTSFVKLDVD--- 316 (373)
T ss_pred HHHHHHhCcEEecCChHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHhcCCCce-EECCCceEEEEEEeCCC---
Confidence 888877543 456778888888888864 356788888999999999999998877776 44889999989888642
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.++.+++.++++++||.+.||+.|+.++++||+++.+++.+++++++|+++++++
T Consensus 317 --~~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 317 --MPSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred --CCHHHHHHHHHHhcCEEEECccccCCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 2578899999899999999999999889999999888999999999999999875
No 34
>PLN02231 alanine transaminase
Probab=100.00 E-value=6.2e-51 Score=395.17 Aligned_cols=383 Identities=19% Similarity=0.298 Sum_probs=300.8
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC--C-CCCCCCCCCCCHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS--G-KFNCYATNSGIPPARRAI 93 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~-~~~~Y~~~~g~~~lr~~i 93 (419)
..|....-+++++.. + ..+++|+|+.|.+ .+|. ..+ +...+.+.. + ....|+++.|.+++|++|
T Consensus 111 ~~~~~~~~~r~v~~~----~---~~p~~i~~~~~~~----~fp~-~~i-~~a~~~l~~~~~~~~~~Y~~s~G~~~lReaI 177 (534)
T PLN02231 111 LGQQPITFFREVLAL----C---DHPSLLDKSETHG----LFSA-DAI-ERAWQILDQIPGRATGAYSHSQGIKGLRDAI 177 (534)
T ss_pred cCCCccHHHHHHHHh----c---cCCccCCCCCccc----cCCH-HHH-HHHHHHHHhcCCccccCcCCCCCcHHHHHHH
Confidence 345555555555542 2 2468899986543 3443 344 444455554 2 356799999999999999
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
++|+.+++|..+++++|++|+|+++++..++++++. +||+|+++.|+|+.|...+...|..++.++++++++|++|+++
T Consensus 178 A~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~~~~~~~g~~~v~~~l~~~~~~~~d~~~ 257 (534)
T PLN02231 178 AAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYSASIALHGGTLVPYYLDEATGWGLEISE 257 (534)
T ss_pred HHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHHHHHHHcCCEEEEEecCcccCCCCCHHH
Confidence 999999889999999999999999999999999984 7999999999999999999999999999999877789999999
Q ss_pred HHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC-CCCCCCccccC------
Q 014769 173 VEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG-SIPYTPMGLFG------ 239 (419)
Q Consensus 173 l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~------ 239 (419)
|++++++ ++++++++||+||||.+++.+++++|+++|+++|++||+||+|..+.|+ +..+.++..+.
T Consensus 258 Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~ 337 (534)
T PLN02231 258 LKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYG 337 (534)
T ss_pred HHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCcccHHHHHhhhccc
Confidence 9998764 5788999999999999999999999999999999999999999999995 34444443321
Q ss_pred -CCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHccc-----c-hH-
Q 014769 240 -SIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKT-----K-ED- 310 (419)
Q Consensus 240 -~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-----~-~~- 310 (419)
.+.++++++||||.+ +++|+|+||+++... ++++++.+........+++...|.++..+++.. . ..
T Consensus 338 ~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~-----~~~l~~~l~k~~~~~~~s~~~~Q~~~~~~l~~p~~~~~~y~~~ 412 (534)
T PLN02231 338 EKDISLVSFQSVSKGYYGECGKRGGYMEVTGF-----TSDVREQIYKVASVNLCSNISGQILASLVMSPPKPGDESYESY 412 (534)
T ss_pred cCCceEEEEeccCcccccCCccceEEEEEecC-----CHHHHHHHHHHHhhhcCCChHHHHHHHHHhCCCCCCcchHHHH
Confidence 123689999999975 789999999987421 025777776655444566778888888888532 1 12
Q ss_pred --HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec--Ccccc-----cCCCCHHHHHHHHHHhcCeEeecC
Q 014769 311 --FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL--NPWLL-----EDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 311 --~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~--~~~~~-----~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
+..+.++.++++++.+.+.|++++++. +..|+||+|+|+++ +.... .+..++..++.+++++.||.+.||
T Consensus 413 ~~~~~~i~~~~~~r~~~l~~~L~~~~gi~-~~~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPG 491 (534)
T PLN02231 413 MAEKDGILSSLARRAKTLEDALNSLEGVT-CNKAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPG 491 (534)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCce-ecCCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCC
Confidence 233457889999999999999988888 45899999999655 32100 001134456788888999999999
Q ss_pred CCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 382 IYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 382 ~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
+.|+. ..+||++++.+++++++++++|.++++++.++
T Consensus 492 s~Fg~~~g~~~~Rit~~~~~e~l~eal~RL~~~~~~~~~~ 531 (534)
T PLN02231 492 SGFGQVPGTWHFRCTILPQEDKIPAIVSRLTEFHKSFMDE 531 (534)
T ss_pred cccCCCCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99985 34799999989999999999999999887654
No 35
>PRK06290 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-50 Score=383.33 Aligned_cols=358 Identities=22% Similarity=0.313 Sum_probs=299.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCC-cEEEcccH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSAD-DVYVTLGC 116 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~-~i~~t~g~ 116 (419)
..+.++|+|+.|.|. +++++.+.+++.+.+.......|++ .|..+||+++++|+++.+|.. ++++ +|++|+|+
T Consensus 41 ~~~~~~i~L~~g~p~----~~~~~~~~~~l~~~~~~~~~~~Y~~-~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs 115 (410)
T PRK06290 41 HPDMELIDMGVGEPD----EMADESVVEVLCEEAKKPENRGYAD-NGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGS 115 (410)
T ss_pred cCCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCC-CCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCH
Confidence 357789999999964 4567788888887765444557885 899999999999999988887 8886 79999999
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 196 (419)
++++..++.+++++||.|+++.|+|+.+...++..|.++..+++++++++.+|++.+++++.++++++++++||||||.+
T Consensus 116 ~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~v 195 (410)
T PRK06290 116 KPALAMLPSCFINPGDVTLMTVPGYPVTGTHTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGAV 195 (410)
T ss_pred HHHHHHHHHHhCCCCCEEEEeCCCCccHHHHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCcC
Confidence 99999999999999999999999999999999999999999999877778889999998888788999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
+|.+++++|+++|++++++||+||+|.++.+++.. .++..+.. .+++|+++||||.|+++|+|+||++++.
T Consensus 196 ~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~-~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~~~------- 267 (410)
T PRK06290 196 ATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKP-LSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVGNE------- 267 (410)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCC-cChhcCCCccccEEEEeechhhcCCchhheEeEEeCH-------
Confidence 99999999999999999999999999998886532 33333332 3467999999999999999999999865
Q ss_pred hhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 276 SGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 276 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++++.+..... ...+++.++|.++..++++ .++.++.+++++++++.+.+.|+++ ++. +..|++|+|+|++++.
T Consensus 268 -~l~~~l~~~~~~~~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~p~g~f~l~v~lp~ 342 (410)
T PRK06290 268 -LIVKAFATVKDNNDSGQFIAIQKAGIYALDH--PEITEKIREKYSRRLDKLVKILNEV-GFK-AEMPGGTFYLYVKAPK 342 (410)
T ss_pred -HHHHHHHHHHhccccCCcHHHHHHHHHHhhC--cHHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCeeeEEEEECCC
Confidence 57777776653 2345567889999999976 4678888999999999999999987 776 5578999999999975
Q ss_pred ccccC--CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769 355 WLLED--INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 355 ~~~~~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~ 416 (419)
....+ ..++.+++.+|+++.+|.+.||+.|+ +|+||+++ .++++.++.++.|++.+.++.
T Consensus 343 ~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~~~--~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 343 GTKSGIKFENAEEFSQYLIKEKLISTVPWDDAG--HFLRFSVTFEAKDEEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ccccCCCCCCHHHHHHHHHHhCCEEEECCcccc--CeEEEEEEcccccccchhHHHHHHHHHHhhcc
Confidence 32100 12577899999888788888988664 79999997 467899999999999887653
No 36
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=1.3e-50 Score=385.35 Aligned_cols=347 Identities=24% Similarity=0.398 Sum_probs=293.3
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC--CCCC-cEEEccc
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK--LSAD-DVYVTLG 115 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~-~i~~t~g 115 (419)
..+.++|+|+.|.|. +++++.+++++.+.+. ....|+++.|.+++|+++++|+++.+|.+ ++++ +|++|+|
T Consensus 25 ~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~G 98 (393)
T TIGR03538 25 PASKPPIALSIGEPK----HPTPAFVLEALRENLH--GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNG 98 (393)
T ss_pred hcCCCeEEecCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCC
Confidence 357899999999964 4567889999988764 34689999999999999999999987775 6885 7999999
Q ss_pred HHHHHHHHHHHhcCCCCe--EEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 116 CKQAVEVILSVLARPGAN--VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 116 ~~~al~~~~~~l~~~gd~--vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
+++++..++++++++||+ |++++|+|..+...+...|.+++.+++++++++.+|++++++++.++++++++++|||||
T Consensus 99 a~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPt 178 (393)
T TIGR03538 99 TREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPT 178 (393)
T ss_pred cHHHHHHHHHHHcCCCCcceEEecCCCCcchHHHHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCc
Confidence 999999999999999986 999999999999999999999999998767778899999998887788999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCc----cccC--CCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPM----GLFG--SIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~----~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
|.+++.+++++|+++|+++|++||+||+|..+.+++. ...+. ...+ ..+++|+++||||.|+++|+|+||+++
T Consensus 179 G~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i~ 258 (393)
T TIGR03538 179 GAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVAG 258 (393)
T ss_pred CcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEec
Confidence 9999999999999999999999999999999887642 22221 1121 245799999999998999999999998
Q ss_pred eCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769 267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
+. ++++.+..... ...+++.+.|.++...+.. .+++++.+..++++++.+.+.|+++ +. +..|++|
T Consensus 259 ~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~--~~-~~~p~gg 325 (393)
T TIGR03538 259 DA--------EILKAFLRYRTYHGCAMPIPTQLASIAAWND--EQHVRENRALYREKFAAVLEILGQV--LD-LELPDAG 325 (393)
T ss_pred CH--------HHHHHHHHHHHhhccCcCHHHHHHHHHHhcC--hHHHHHHHHHHHHHHHHHHHHHHhh--Cc-ccCCCee
Confidence 65 57777776654 2456788888888777754 5788889999999999999999874 33 3479999
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+|+|++++. ++.+++.++++++||.+.||+.|+. .+++||+++.+++++++++++|+++
T Consensus 326 ~f~~~~~~~-------~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 392 (393)
T TIGR03538 326 FYLWPKVPG-------DDEAFARALYEEENVTVLPGRFLAREAEGVNPGEGRVRIALVAPLEECVEAAERIRSF 392 (393)
T ss_pred EEEEEECCC-------CHHHHHHHHHHHCCEEEeCCccccccccCCCCCCCEEEEEecCCHHHHHHHHHHHHHh
Confidence 999999871 4677888888889999999998852 4799999987899999999999875
No 37
>PRK08363 alanine aminotransferase; Validated
Probab=100.00 E-value=2.8e-50 Score=383.64 Aligned_cols=364 Identities=27% Similarity=0.499 Sum_probs=304.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
..+.++|+|+.|.|... .+++++.+.+++.+.+... ...|+++.|..+||+++++|+.+.+|.++++++|++|+|+++
T Consensus 27 ~~~~~~i~l~~g~p~~~-~~~p~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~ 104 (398)
T PRK08363 27 KKGIKVIRLNIGDPVKF-DFQPPEHMKEAYCRAIKEG-HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTE 104 (398)
T ss_pred hcCCCeEEEeCCCCCcC-CCCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHH
Confidence 35789999999998632 4667889999999888654 347988899999999999999998898999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
++..++.+++++||+|++++|+|..+...++..|..++.++...++++.+|++.++++++++++++++++|+||||.+++
T Consensus 105 al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 184 (398)
T PRK08363 105 ALQLIFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYE 184 (398)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999998887773333456778999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
.+++++|+++|+++|+++|+||+|..+.+++. ..++..+....++++++||||.|++||+|+||+++.++. ++
T Consensus 185 ~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~------~~ 257 (398)
T PRK08363 185 KKTLKEILDIAGEHDLPVISDEIYDLMTYEGK-HVSPGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPE------GK 257 (398)
T ss_pred HHHHHHHHHHHHHcCeEEEEhhhhhhhccCCc-ccCHHHcCcCCcEEEEecchhccCCccceEEEEEEeCcH------HH
Confidence 99999999999999999999999999887653 234445555567999999999999999999999983221 34
Q ss_pred HHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 279 IDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 279 ~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++.+... .....+++.+.|.++..+|.. ..+++++.+++++++++.+.+.|++++++. +..|.+|+|+|++++.
T Consensus 258 ~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~-~~~p~g~~~~~~~l~~ 335 (398)
T PRK08363 258 LAEVREAIDKLARIRLCPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGIS-TTKPQGAFYIFPRIEE 335 (398)
T ss_pred HHHHHHHHHHHhcccccCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCE-ecCCCeEEEEEEEecc
Confidence 4444332 222356788999999998875 357888999999999999999999887776 5588999999998874
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.. ..++.+++.+++.++||.|.||+.|+. ++|+||+++.+++++++++++|++++++.+
T Consensus 336 ~~---~~~~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~~~ 396 (398)
T PRK08363 336 GP---WKDDKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVFLPPVEILEEAMDRFEEFMRERL 396 (398)
T ss_pred CC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 21 114567777888899999999999875 479999998888999999999999987753
No 38
>PRK07683 aminotransferase A; Validated
Probab=100.00 E-value=5.2e-50 Score=379.83 Aligned_cols=375 Identities=22% Similarity=0.418 Sum_probs=312.9
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
.+.+......++.++..+. ..+++|+|+.|.|. +++++.+.+++.+.+... ...|++..|..+||++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~------~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~~~-~~~Y~~~~g~~~lr~~ia 75 (387)
T PRK07683 7 PRVKDIQISGIRQFSNMVQ------NYDNLISLTIGQPD----FPTPSHVKEAAKRAITEN-YTSYTHNAGLLELRKAAC 75 (387)
T ss_pred HHHHhCCccHHHHHHHHHH------hcCCeEEecCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHH
Confidence 3455556666666665321 14678999999864 456788889999887653 358998899999999999
Q ss_pred HHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 95 DYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 95 ~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
+++.+.+|.+++++ +|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++.+. +++.+|.+.+
T Consensus 76 ~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l 154 (387)
T PRK07683 76 NFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGAKPVFIDTRS-TGFRLTAEAL 154 (387)
T ss_pred HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchHHHHHHcCCEEEEeecCc-ccCCCCHHHH
Confidence 99998888888998 999999999999999999999999999999999999999999999999998753 4677888999
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCC
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISK 252 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK 252 (419)
++.++++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++.. .++..+ +..+++++++||||
T Consensus 155 ~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~-~~~~~~~~~~~~vi~~~s~SK 233 (387)
T PRK07683 155 ENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPH-TSIAHFPEMREKTIVINGLSK 233 (387)
T ss_pred HHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCc-CChhhccCCcCCeEEEeeccc
Confidence 9988888899999999999999999999999999999999999999999998876533 344444 23457999999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
.|++||+|+||++++. ++++.+...... ..+++.+.|.++..++++. ..++++.+.+++++++.+.+.|+
T Consensus 234 ~~~~pGlRiG~i~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~l~ 304 (387)
T PRK07683 234 SHSMTGWRIGFLFAPS--------YLAKHILKVHQYNVTCASSISQYAALEALTAG-KDDAKMMRHQYKKRRDYVYNRLI 304 (387)
T ss_pred cccCccceeEEEEcCH--------HHHHHHHHHHHhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999865 577777765432 3456778899999999764 35678888999999999999998
Q ss_pred cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
+. ++. +..|++|+|+|+.++... .++.+++..+++++||.+.||+.|+. ++++||+++.+++++.+++++|.
T Consensus 305 ~~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~~~~~~~~~~al~~l~ 378 (387)
T PRK07683 305 SM-GLD-VEKPTGAFYLFPSIGHFT----MSSFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSYAYSIETLKEGLDRLE 378 (387)
T ss_pred Hc-CCc-ccCCCeeEEEEEecccCC----CCHHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 87 676 558899999999886421 24677888888899999999998865 58999999888999999999999
Q ss_pred HHHHHHhc
Q 014769 410 AFCQRHTK 417 (419)
Q Consensus 410 ~~~~~~~~ 417 (419)
+++++.+|
T Consensus 379 ~~l~~~~~ 386 (387)
T PRK07683 379 AFLQQKAK 386 (387)
T ss_pred HHHHhhcc
Confidence 99987654
No 39
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=100.00 E-value=1.4e-50 Score=386.65 Aligned_cols=347 Identities=20% Similarity=0.246 Sum_probs=285.7
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
.++++++|+.|+|. +++++.+.+++.+.+... ....|+++.|.++||++|++|+.+.+|.++++++|++|+|
T Consensus 32 ~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~G 107 (409)
T PRK07590 32 PEAKIIRLGIGDVT----QPLPPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDG 107 (409)
T ss_pred CCCceEEecCcCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCC
Confidence 46789999999864 556788888888877642 3458988899999999999999888899999999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE-----------EEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 116 CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE-----------VRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+++++..++. ++.+||+|++++|+|+.+...++..|.. ++.+++++++++.++.+. ++++++
T Consensus 108 a~~al~~l~~-~~~~gd~V~v~~P~Y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------~~~k~i 180 (409)
T PRK07590 108 AKCDTGNILD-IFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYSGIVYLPCTAENNFVPELPE------EKVDII 180 (409)
T ss_pred HHHHHHHHHH-hcCCCCEEEEeCCCCcchHHHHHHcCCcccccccccccceeEeecccccCCcccCcc------cCceEE
Confidence 9999998754 5589999999999999999999999986 888888655556555432 478899
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
++++||||||.+++.+++++|+++|++++++||+||+|..+.+++....++..++. .+++|+++||||.|++||+|+||
T Consensus 181 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~pGlRiG~ 260 (409)
T PRK07590 181 YLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLPHSIYEIEGARECAIEFRSFSKTAGFTGTRCAY 260 (409)
T ss_pred EEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCCcchhhCCCcccceEEEecCccccCCcCceeEE
Confidence 99999999999999999999999999999999999999998886644444555543 24689999999999999999999
Q ss_pred EEeeCCCCccchhhHHHH------------HHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 264 LVTNDPNGIFQKSGIIDS------------IKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~------------l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
+++++ ++++. +..... ...+++.+.|.++..++......++++.++.++++++.+.+.|
T Consensus 261 ~i~~~--------~li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L 332 (409)
T PRK07590 261 TVVPK--------ELKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRAAEAVYSPEGKAQIKELIDYYMENAKIIREGL 332 (409)
T ss_pred EEcCH--------HHhhhccccchhhhHHHHHHHHhhcccCcCHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99965 35541 111112 1235788899999888875445788889999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l 408 (419)
+++ ++. +..|.+|+|+|++++.. .++.+++.++++++||.+.||+.|+. .+++||+++.+++++++++++|
T Consensus 333 ~~~-~~~-~~~~~g~~f~wi~~~~~-----~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~l~rl 405 (409)
T PRK07590 333 ESA-GFE-VYGGVNAPYIWVKTPDG-----MSSWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLSAFGSRENVLEAMERI 405 (409)
T ss_pred Hhc-CCc-eecCCcceEEEEECCCC-----CCHHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEEccCCHHHHHHHHHHH
Confidence 987 676 54788999999999742 24678888888889999999998875 4799999877899999999999
Q ss_pred HHHH
Q 014769 409 KAFC 412 (419)
Q Consensus 409 ~~~~ 412 (419)
.+++
T Consensus 406 ~~~~ 409 (409)
T PRK07590 406 KKAL 409 (409)
T ss_pred HhhC
Confidence 8753
No 40
>PRK05764 aspartate aminotransferase; Provisional
Probab=100.00 E-value=6e-50 Score=381.45 Aligned_cols=385 Identities=27% Similarity=0.458 Sum_probs=320.9
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++....++..+..+..-. +.+.. .+.++++|+.|+|. +++++.+.+++.+.+.+.. ..|++..|..+||+++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~-~~Y~~~~g~~~lr~~i 77 (393)
T PRK05764 5 SKRVSRVTPSATLAVTAKA-KELKA-QGRDVISLGAGEPD----FDTPEHIKEAAIEALDDGK-TKYTPAAGIPELREAI 77 (393)
T ss_pred hhhhhhcCchHHHHHHHHH-HHHHh-ccCCEEEeCCCCCC----CCCCHHHHHHHHHHHhcCC-CCcCCCCChHHHHHHH
Confidence 4455566677766665533 33322 36789999999975 4567889999988876543 3699989999999999
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
++++.+.+|.++++++|++|+|+++++..++.+++++||.|++++|+|..+...++..|.++..+++++++++.+|++.+
T Consensus 78 a~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l 157 (393)
T PRK05764 78 AAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYPEMVKLAGGVPVFVPTGEENGFKLTVEQL 157 (393)
T ss_pred HHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchHHHHHHcCCEEEEEecCcccCCcCCHHHH
Confidence 99999888888899999999999999999999999999999999999999999999999999999987666788999999
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--CCCCcEEEEecCC
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSIS 251 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~s 251 (419)
+++++++++++++++|+||||.++|.+++++|+++|+++++++|+||+|..+.+++....++..+ +..+++++++|||
T Consensus 158 ~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~S 237 (393)
T PRK05764 158 EAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFS 237 (393)
T ss_pred HHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCc
Confidence 99998788999999999999999999999999999999999999999999988866544444333 2345789999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
|.++++|+|+||++++. ++++.+..... ...+++.+.|.++..+++. ..+++++.++.++++++.+.+.|
T Consensus 238 K~~~~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L 308 (393)
T PRK05764 238 KAYAMTGWRLGYAAGPK--------ELIKAMSKLQSHSTSNPTSIAQYAAVAALNG-PQDEVEEMRQAFEERRDLMVDGL 308 (393)
T ss_pred ccccCccceeEEEecCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999764 57777776643 3457788999999999873 35778888899999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
++++++. +..|++|+|+|+.++........++.++...+++++||.+.||..|+..+++||+++.+++++++++++|.+
T Consensus 309 ~~~~g~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~~~~~~~~~~i~~l~~ 387 (393)
T PRK05764 309 NEIPGLE-CPKPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYATSLEDLEEGLERIER 387 (393)
T ss_pred hhCCCCc-ccCCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEecCCHHHHHHHHHHHHH
Confidence 9887887 557899999999887531111113578888888889999999999988899999998889999999999999
Q ss_pred HHHHH
Q 014769 411 FCQRH 415 (419)
Q Consensus 411 ~~~~~ 415 (419)
+++++
T Consensus 388 ~~~~~ 392 (393)
T PRK05764 388 FLESL 392 (393)
T ss_pred HHHhh
Confidence 98754
No 41
>PRK12414 putative aminotransferase; Provisional
Probab=100.00 E-value=3.7e-50 Score=380.47 Aligned_cols=349 Identities=22% Similarity=0.387 Sum_probs=295.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~a 119 (419)
.+++|+|+.|.|. +++++.+.+++.+.+... ...|+++.|.+++|+++++++++.+|...++ ++|++|+|++++
T Consensus 28 ~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~a 102 (384)
T PRK12414 28 QHDALNLSQGAPN----FAPDPALVEGVARAMRDG-HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEG 102 (384)
T ss_pred hCCeEEcCCCCCC----CCCCHHHHHHHHHHHHhC-CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHH
Confidence 5679999999964 456788889988877654 3589999999999999999999988877766 689999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++++++.+||+|++++|+|..+...++..|.+++.+++++ +++.+|++.++++++++++++++++|+||||.+++.
T Consensus 103 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~ 181 (384)
T PRK12414 103 LYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSP-EDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSA 181 (384)
T ss_pred HHHHHHHhcCCCCEEEEeCCCccchHHHHHHcCCEEEEEecCc-cccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999998754 357899999999998888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++++++|+||+|..+.|++....++..+.. .+++++++||||.|++||+|+||+++++ ++
T Consensus 182 ~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~--------~l 253 (384)
T PRK12414 182 ADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA--------EL 253 (384)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH--------HH
Confidence 99999999999999999999999999887654444444432 4579999999999999999999999875 57
Q ss_pred HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
++.+..... ...+++.+.|.++..+|+.. .+..+.+..++++++.+.+.|++. ++. +..|.+|+|+|++++...
T Consensus 254 ~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~--~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~~~~~~~~- 328 (384)
T PRK12414 254 MDEIRKVHQFMVFSADTPMQHAFAEALAEP--ASYLGLGAFYQRKRDLLARELAGS-RFE-LLPSEGSFFMLARFRHFS- 328 (384)
T ss_pred HHHHHHHHhheecCCCcHHHHHHHHHhcCC--hHHHHHHHHHHHHHHHHHHHHHhC-CCe-ecCCCcceEEEEcccccC-
Confidence 777777653 34677889999999999763 344567788999999999999987 676 558889999999886421
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
. .++.+++.++++++||.+.||+.|+. .+++||+++.+++++++++++|.+
T Consensus 329 -~-~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~~~rl~~ 383 (384)
T PRK12414 329 -D-ESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSFSKDDATLVEGARRLCS 383 (384)
T ss_pred -C-CCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 0 14667887888889999999998853 479999998889999999999974
No 42
>PRK08912 hypothetical protein; Provisional
Probab=100.00 E-value=4.9e-50 Score=380.71 Aligned_cols=355 Identities=25% Similarity=0.395 Sum_probs=299.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a 119 (419)
..++|+|+.|.|. .+.++.+.+++.+.+... ...|+++.|.+++|+++++++.+.+|..++++ +|++|+|++++
T Consensus 25 ~~~~i~l~~g~p~----~~~p~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 99 (387)
T PRK08912 25 EHGAINLGQGFPD----DPGPEDVRRAAADALLDG-SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEA 99 (387)
T ss_pred hCCeEEccCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHH
Confidence 4578999999975 334567778877776543 35799999999999999999998889889998 99999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.+++++||+|++++|+|+.+...++..|.+++.+++++ +++.+|++.+++.+.++++++++++|+||||.++|.
T Consensus 100 l~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~ 178 (387)
T PRK08912 100 LAAALLALVEPGDEVVLFQPLYDAYLPLIRRAGGVPRLVRLEP-PHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPR 178 (387)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCH
Confidence 9999999999999999999999999999999999999998753 357899999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++++++|+||+|..+.+++....++..+.. .+++++++||||.|+++|+|+||+++++ ++
T Consensus 179 ~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~ 250 (387)
T PRK08912 179 EELALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP--------PL 250 (387)
T ss_pred HHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH--------HH
Confidence 99999999999999999999999998887644444444332 3578999999999999999999999865 57
Q ss_pred HHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 279 IDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 279 ~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
++.+...... .++.++..|.++..++.. ..+++++.+++++++++.+.+.|+.+ ++. +..|++|+|+|++++....
T Consensus 251 ~~~l~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~g~~~l~~~l~~~~~ 327 (387)
T PRK08912 251 LRVLAKAHQFLTFTTPPNLQAAVAYGLGK-PDDYFEGMRADLARSRDRLAAGLRRI-GFP-VLPSQGTYFLTVDLAPLGL 327 (387)
T ss_pred HHHHHHHHhhccccCChHHHHHHHHHHhC-CHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCcceEEEecccccCC
Confidence 7777665432 355666778888777753 35778889999999999999999987 777 5578899999999874210
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
..++.+++.++++++||.+.||..|+. .+|+||+++.+++++++++++|++++++
T Consensus 328 --~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 328 --AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred --CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 125678888888889999999998853 5899999988899999999999988764
No 43
>PRK05957 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-49 Score=377.58 Aligned_cols=357 Identities=23% Similarity=0.336 Sum_probs=303.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~a 119 (419)
.+++++|+.|.|. +++++.+.+++.+.+.......|++..|.+++|+++++++.+.+|..++ +++|++|+|++++
T Consensus 26 ~~~~~~l~~g~~~----~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~ 101 (389)
T PRK05957 26 NPGTISLGQGVVS----YPPPPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMA 101 (389)
T ss_pred CCCeEEccCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHH
Confidence 3578999999864 5667889999988876555568999999999999999999988888777 7899999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.+++++||.|++++|+|..+...++..|.+++.++.+ .++.+|++.++++++++++++++++|+||||.++|.
T Consensus 102 l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~ 179 (389)
T PRK05957 102 FMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPILVPTD--DNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPE 179 (389)
T ss_pred HHHHHHHhcCCCCEEEEeCCCCcCHHHHHHhcCCEEEEeecC--CCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCH
Confidence 999999999999999999999999988888999999998864 457899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++|+++|+||+|.++.+++....+...+ +...++|+++||||.|+++|+|+||+++++ ++
T Consensus 180 ~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~~ 251 (389)
T PRK05957 180 ALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI--------HL 251 (389)
T ss_pred HHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH--------HH
Confidence 999999999999999999999999998865432233232 344579999999999999999999999865 68
Q ss_pred HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
++++..... ...+++.+.|.++..+++.. ..++++..+.++++++.+.+.|++++++..+..|++|+|+|++++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~gg~~~~~~~~~~-- 328 (389)
T PRK05957 252 LEAIKKIQDTILICPPVVSQYAALGALQVG-KSYCQQHLPEIAQVRQILLKSLGQLQDRCTLHPANGAFYCFLKVNTD-- 328 (389)
T ss_pred HHHHHHHHhhcccCCCcHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhcCCCccccCCCeeEEEEEeCCCC--
Confidence 888877654 24566778999988888753 36788888889999999999999876642255789999999998642
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.++.+++.++++++||.+.||+.|+. ++|+||+++ .+++++++++++|.+.++++..
T Consensus 329 ---~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~~~~ 388 (389)
T PRK05957 329 ---LNDFELVKQLIREYRVAVIPGTTFGMKNGCYLRIAYGALQKATAKEGIERLVQGLKTIVQ 388 (389)
T ss_pred ---CChHHHHHHHHHHCCEEEccchhhCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHHhhhc
Confidence 25788999988889999999999875 469999996 5889999999999999987653
No 44
>PRK07568 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.5e-49 Score=379.21 Aligned_cols=379 Identities=26% Similarity=0.417 Sum_probs=310.8
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 96 (419)
..+.....++.+...... .. ..+.++++|+.|.|. +++++.+.+++.+... ....|++..|.+++|++++++
T Consensus 7 ~~~~~~~~~~~~~~~~~~-~~-~~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~--~~~~Y~~~~g~~~lr~~ia~~ 78 (397)
T PRK07568 7 VLNMPASPIRKLVPYADE-AK-KRGIKVYHLNIGQPD----IKTPEVFFEAIKNYDE--EVLAYSHSQGIPELREAFAKY 78 (397)
T ss_pred hhhCCcchHHHHHHHHHH-HH-hhCCCEEEecCCCCC----CCCCHHHHHHHHHHhc--CCcCcCCCCCCHHHHHHHHHH
Confidence 344455566666543321 11 125679999999864 4557888888877643 345799999999999999999
Q ss_pred HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc-cChHHHHH
Q 014769 97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE-VDLDAVEA 175 (419)
Q Consensus 97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~l~~ 175 (419)
+. .+|.++++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++.+.++. .+++.+++
T Consensus 79 ~~-~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~g~~~~~~~~l~~ 157 (397)
T PRK07568 79 YK-KWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPSKEEIEK 157 (397)
T ss_pred HH-HhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHHHHHHHcCCEEEEeecCcccCCCCCCHHHHHH
Confidence 98 47888899999999999999999999999999999999999999988889999999999886545554 36789999
Q ss_pred hhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcC
Q 014769 176 LADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRW 254 (419)
Q Consensus 176 ~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~ 254 (419)
+++++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|..+.+++....++..+.. .+++++++||||.|
T Consensus 158 ~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~ 237 (397)
T PRK07568 158 LITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSALSLEGLEDRVIIIDSVSKRY 237 (397)
T ss_pred hcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChhhcCCCcCCEEEEecchhhc
Confidence 98888899999999999999999999999999999999999999999999887654445544443 46799999999999
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
+++|+|+||++++++ ++++.+........+++.+.|.++..+++.. ..++++.+..++++++.+.+.|++++
T Consensus 238 ~~~G~R~G~~~~~~~-------~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~ 309 (397)
T PRK07568 238 SACGARIGCLISKNK-------ELIAAAMKLCQARLSPPTLEQIGAAALLDTP-ESYFDEVREEYKKRRDILYEELNKIP 309 (397)
T ss_pred cCCCcceEEEecCCH-------HHHHHHHHHhhccCCCCcHHHHHHHHHhhCC-HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 999999999998542 4666665443334577888999999999753 57888899999999999999999887
Q ss_pred CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh-----cCeEeecCCCCCC-----CCeEEEEeecCHHHHHHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL-----KNWLRIAFCAEPSALKDG 404 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~~ 404 (419)
++. +..|.+|+|+|++++.. ++.++..+++++ +||.+.||..|+. .+++||+++.++++++++
T Consensus 310 ~~~-~~~p~g~~~~~~~l~~~------~~~~~~~~l~~~~~~~~~gv~v~pg~~f~~~~~~~~~~iRls~~~~~~~~~~~ 382 (397)
T PRK07568 310 GVV-CEKPKGAFYIIAKLPVD------DAEDFAKWLLTDFNYNGETVMVAPASGFYATPGLGKNEIRIAYVLNEEDLKRA 382 (397)
T ss_pred Cce-ecCCCcceEEEEecCCC------CHHHHHHHHHhhcccccceEEEeCchHhcCCCCCCCCeEEEEEeCCHHHHHHH
Confidence 776 55889999999998741 467788887764 6999999998842 469999998788999999
Q ss_pred HHHHHHHHHHHhccC
Q 014769 405 LGRMKAFCQRHTKKH 419 (419)
Q Consensus 405 l~~l~~~~~~~~~~~ 419 (419)
+++|.++++++.+||
T Consensus 383 ~~~l~~~l~~~~~~~ 397 (397)
T PRK07568 383 MEILKEALEKYNKRK 397 (397)
T ss_pred HHHHHHHHHHhhccC
Confidence 999999999988775
No 45
>PRK07550 hypothetical protein; Provisional
Probab=100.00 E-value=1e-49 Score=378.41 Aligned_cols=377 Identities=23% Similarity=0.266 Sum_probs=313.3
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++..+..+..++.+.+++ +.+. +.+.+.|+|+.|+|. .++++.+.+++.+.+.......|++..|.++||+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~i 76 (386)
T PRK07550 3 NPLIAALFPPPIPEVRAWL-AGYD-GADGPLIDLSQAVPG----YPPPPELLRALAEAAADPAAHLYGPVEGLPELREAY 76 (386)
T ss_pred chhhhhcCChHHHHHHHHH-HHHh-hcCCCeEEeCCCCCC----CCCCHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHH
Confidence 3455566666777777654 3332 347789999999974 345788888888877554556898889999999999
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|..+...++..|.+++.++++++.++.+|++.+
T Consensus 77 a~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~l 156 (386)
T PRK07550 77 AAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHKMWLDMLGIRPVYLPCDEGPGLLPDPAAA 156 (386)
T ss_pred HHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHHHHhcCCEEEEEecCCCcCCCCCHHHH
Confidence 99999988988999999999999999999999999999999999999999999999999999999987666778899999
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCC
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISK 252 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK 252 (419)
+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++... +...++++++||||
T Consensus 157 ~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 236 (386)
T PRK07550 157 EALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSK 236 (386)
T ss_pred HHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchh
Confidence 99998888999999999999999999999999999999999999999999887654322222222 23457899999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
.++++|+|+||+++++ ++++.+..... ...+++.+.|.++..+++. ..+++++.++.++++++.+.+.|.
T Consensus 237 ~~g~~G~RiG~i~~~~--------~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~ 307 (386)
T PRK07550 237 SYALTGHRVGAVVASP--------ARIAEIEKFMDTVAICAPRIGQIAVAWGLPN-LADWRAGNRAEIARRRDAFRAVFA 307 (386)
T ss_pred hccCcccceEeeecCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988999999999865 57777776653 3456788899999999875 357788888999999999999998
Q ss_pred cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGLGRM 408 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l~~l 408 (419)
.++++. + .|.+|+|+|++++... .++.+++.++++++||.+.||..|+. ++++||+++ .+++++++++++|
T Consensus 308 ~~~~~~-~-~~~g~~~~~~~~~~~~----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~~~~~~~~~l 381 (386)
T PRK07550 308 RLPGWE-L-LASGAYFAYVRHPFPD----RPSREVARRLAKEAGILCLPGTMFGPGQEGYLRLAFANADVAGIGELVERL 381 (386)
T ss_pred hCCCce-e-CCCceEEEEecCCCCC----CCHHHHHHHHHHhcCEEEeCchhhCCCCCCEEEEEeecCCHHHHHHHHHHH
Confidence 865654 3 5778999999987411 25788888888889999999999864 579999997 5789999999999
Q ss_pred HHH
Q 014769 409 KAF 411 (419)
Q Consensus 409 ~~~ 411 (419)
.++
T Consensus 382 ~~~ 384 (386)
T PRK07550 382 RAF 384 (386)
T ss_pred Hhh
Confidence 875
No 46
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=100.00 E-value=2.1e-49 Score=376.17 Aligned_cols=375 Identities=21% Similarity=0.404 Sum_probs=306.5
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
++....+...++++...+.. .+++|+|+.|.|. +++++.+.+++.+.+... ...|+++.|.+++|++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia 77 (391)
T PRK07309 9 KQLDKIEVSLIRQFDQSISD------IPGILKLTLGEPD----FTTPDHVKEAAKRAIDAN-QSHYTGMAGLLELRQAAA 77 (391)
T ss_pred hhhhhcCccHHHHHHHHHHh------cCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCcHHHHHHHH
Confidence 33444455555555443311 3679999999974 445678888888877643 347999899999999999
Q ss_pred HHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 95 DYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 95 ~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
+++.+.++..+++ ++|++|+|++++++.++.+++.+||+|++++|+|..+...++..|.+++.++.+. .++.+|++.+
T Consensus 78 ~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l 156 (391)
T PRK07309 78 DFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTE-NDFVLTPEML 156 (391)
T ss_pred HHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchHHHHHHcCCEEEEEecCC-cCCcCCHHHH
Confidence 9999888887775 7999999999999999999999999999999999999999999999999988753 4567999999
Q ss_pred HHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769 174 EALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (419)
Q Consensus 174 ~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 250 (419)
+++++. +++++++++|+||||.+++.+++++|+++|+++++++|+|++|..+.+++....++..+. .+++++++||
T Consensus 157 ~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~-~~~~i~~~S~ 235 (391)
T PRK07309 157 EKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYL-PDQTILINGL 235 (391)
T ss_pred HHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhc-cCCEEEEecC
Confidence 988864 578899999999999999999999999999999999999999999998665444444433 2579999999
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
||.|+++|+|+||++++. ++++.+..... ...+++.+.|.++..++++.. .+....+..++++++.+.+.
T Consensus 236 SK~~g~~GlRvG~~v~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~-~~~~~~~~~~~~~~~~~~~~ 306 (391)
T PRK07309 236 SKSHAMTGWRIGLIFAPA--------EFTAQLIKSHQYLVTAATTMAQFAAVEALTNGK-DDALPMKKEYIKRRDYIIEK 306 (391)
T ss_pred hhhccCccceeEEEEeCH--------HHHHHHHHHHhhcccCCChHHHHHHHHHHhCCh-hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999875 57777776543 235678889999999997642 33456678889999999999
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~ 407 (419)
|+++ ++. +..|++|+|+|++++... ..++.+++.++++++||.+.||..|+. +++|||+++.+.+++++++++
T Consensus 307 l~~~-~~~-~~~p~gg~~~~~~l~~~~---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~l~~~i~~ 381 (391)
T PRK07309 307 MTDL-GFK-IIKPDGAFYIFAKIPAGY---NQDSFKFLQDFARKKAVAFIPGAAFGPYGEGYVRLSYAASMETIKEAMKR 381 (391)
T ss_pred HHHC-CCe-ecCCCeeEEEEEECCCCC---CCCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHH
Confidence 9887 676 558899999999887521 124677888888889999999998875 679999998788999999999
Q ss_pred HHHHHHHHh
Q 014769 408 MKAFCQRHT 416 (419)
Q Consensus 408 l~~~~~~~~ 416 (419)
|+++++++.
T Consensus 382 l~~~~~~~~ 390 (391)
T PRK07309 382 LKEYMEEHA 390 (391)
T ss_pred HHHHHHhhc
Confidence 999998764
No 47
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=4.1e-50 Score=386.58 Aligned_cols=361 Identities=20% Similarity=0.355 Sum_probs=291.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh-----C------CCCCCCCCCCCCHHHHHHHHHHHHhhCCC--CCCC
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR-----S------GKFNCYATNSGIPPARRAIADYLSRDLPY--KLSA 107 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-----~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~--~~~~ 107 (419)
+..+|+|+.+.+. ++ .+.+.+.+..... . .....|+++.|.++||++||+|+.++++. .+++
T Consensus 37 p~g~i~L~~~En~----l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~ 111 (468)
T PLN02450 37 PSGIIQMGLAENQ----LS-FDLIESWLAKNPDAAGLKRNGQSIFRELALFQDYHGLPAFKNALAEFMSEIRGNKVTFDP 111 (468)
T ss_pred CCeeEEeehhHhH----hh-HHHHHHHHHhCchhhhcccccccchhhhhcCCCCCChHHHHHHHHHHHHHhhCCCCCcCh
Confidence 4468999999743 22 2555555443211 0 12346999999999999999999987764 4789
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N 180 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 180 (419)
++|++|+|+++++..++.+++++||.|++++|+|+.+...+. ..|.+++.++++.++++.++++.+++++.+ +
T Consensus 112 ~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~ 191 (468)
T PLN02450 112 NKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDRDLKWRTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLK 191 (468)
T ss_pred HHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHHHHhhcCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999987777 589999999987667788899999887753 6
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc---------CCCCcEEEEecCC
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---------GSIVPVITLGSIS 251 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---------~~~~~~i~~~s~s 251 (419)
++++++++||||||.++|.+++++|+++|++++++||+||+|+.+.|++..+.++... +..+++++++|||
T Consensus 192 ~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~S 271 (468)
T PLN02450 192 VKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLS 271 (468)
T ss_pred eeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEecc
Confidence 7889999999999999999999999999999999999999999988876544343221 1346899999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHH
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~ 329 (419)
|.|+++|+|+||++++++ .+.+.+..... ...++.+.|.++..+|+... ..++++++++++++++.+.+.
T Consensus 272 K~~~l~GlRiG~li~~~~-------~l~~~~~~~~~-~~~~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~ 343 (468)
T PLN02450 272 KDLGLPGFRVGAIYSNDE-------MVVSAATKMSS-FGLVSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSG 343 (468)
T ss_pred ccCCCCCccEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999752 24555554432 34568899999999998743 247888899999999999999
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccc-cCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLL-EDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGL 405 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l 405 (419)
|+++ ++. +..|++|+|+|++++.... ....+..++..++++++||.+.||+.|+. ++||||+++ .+++++++++
T Consensus 344 L~~~-gi~-~~~~~~g~flwi~l~~~~~~~~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~~~~~~l~~~l 421 (468)
T PLN02450 344 LEAA-GIK-CLKSNAGLFCWVDMRHLLKSNTFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFANMSEETLDLAM 421 (468)
T ss_pred HHHc-CCc-ccCCCceEEEEEEchHhcCcCCchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecCCCHHHHHHHH
Confidence 9988 777 5589999999999874211 01112356778888889999999999875 689999998 4899999999
Q ss_pred HHHHHHHHHHh
Q 014769 406 GRMKAFCQRHT 416 (419)
Q Consensus 406 ~~l~~~~~~~~ 416 (419)
++|++++++..
T Consensus 422 ~ri~~~l~~~~ 432 (468)
T PLN02450 422 KRLKSFVESDS 432 (468)
T ss_pred HHHHHHHHhcc
Confidence 99999997765
No 48
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-49 Score=349.79 Aligned_cols=355 Identities=22% Similarity=0.365 Sum_probs=314.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.++++.|.+.+ ++|+.+|.+++|+.+.++.+.+ +|+ .+..++-++|++|.+++++..++++.|++++|..-++
T Consensus 24 ~~DvlPmWVAD----MDf~~pp~i~~Al~~rvdhGvf-GY~--~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi 96 (388)
T COG1168 24 NEDVLPMWVAD----MDFPTPPEIIEALRERVDHGVF-GYP--YGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGI 96 (388)
T ss_pred CCCcceeeeec----ccCCCCHHHHHHHHHHHhcCCC-CCC--CCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhH
Confidence 47899999998 6799999999999999988765 787 4668899999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHHHHhhcCC-ccEEEEeCCCCccccCCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADKN-TAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~-~~~v~i~~p~nptG~~~~ 198 (419)
..++++++++||.|++..|.|+++....+..|.++...|+.. ++.|.+|++.|++++.+. .++.++||||||||.+.+
T Consensus 97 ~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt 176 (388)
T COG1168 97 SLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWT 176 (388)
T ss_pred HHHHHHhCcCCCeeEecCCCchHHHHHHhhcCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCcccc
Confidence 999999999999999999999999999999999999999874 455788999999988765 588999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC--CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+++|.+|.++|.+||+.||+||+|+.+.+.|..+.++..++.. ++.+++.|.||+|.++|+++++++.++++
T Consensus 177 ~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~------ 250 (388)
T COG1168 177 KEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRE------ 250 (388)
T ss_pred HHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHH------
Confidence 9999999999999999999999999999999766666665544 57899999999999999999999998743
Q ss_pred hHHHHHHh-hh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecC
Q 014769 277 GIIDSIKD-CL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 277 ~~~~~l~~-~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~ 353 (419)
+..++.+ .. ....++|.++..|...++.++ ..|+++..+.++.+++++.+.+.+ +|++. +..|+|.+.+|+++.
T Consensus 251 -lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G-~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~-v~~p~gTYL~WLD~r 327 (388)
T COG1168 251 -LRAKFLKRLKRNGLHGPSALGIIATEAAYNQG-EPWLDELLEYLKDNRDYVADFLNKHLPGVK-VTEPQGTYLAWLDCR 327 (388)
T ss_pred -HHHHHHHHHHHhcCCCCchHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EecCCCceeeeeecc
Confidence 3233322 22 335688999999999999875 699999999999999999999997 79999 669999999999997
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
... .++.++...++.+.+|.+.+|..||. .+++|++++++++.+++++++|+.++++.
T Consensus 328 ~l~----l~d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 328 ELG----LDDSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred ccC----CChHHHHHHHHHhhcEeccCCCccCcCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 653 25678889999999999999999986 58999999999999999999999888753
No 49
>PRK05839 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-49 Score=374.13 Aligned_cols=347 Identities=22% Similarity=0.373 Sum_probs=285.1
Q ss_pred HHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q 014769 32 IIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVY 111 (419)
Q Consensus 32 ~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~ 111 (419)
+.....+.++.++++|+.|.|. +++++.+.+++.+... ....|+++.|..+||+++++++++++|.++++++|+
T Consensus 14 ~~~~~~~~~~~~~i~l~~~~p~----~~~~~~~~~a~~~~~~--~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~ 87 (374)
T PRK05839 14 LLKEITPNKEYKGLDLTIGEPQ----FETPKFIQDALKNNAH--LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELI 87 (374)
T ss_pred HHHHhhhcCCCCeEEcCCCCCC----CCCCHHHHHHHHHHhh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEE
Confidence 4444434457799999999864 4567888888877653 356899999999999999999999889889999999
Q ss_pred EcccHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769 112 VTLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
+|+|+++++..++.+++ .+||.|++++|+|+.+...+...|++++.+++++++++.+|++... + ++++++++++|
T Consensus 88 it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~~~~~~~~d~~~~~--~-~~~k~v~i~nP 164 (374)
T PRK05839 88 PTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKVLLMPLTKENDFTPSLNEKE--L-QEVDLVILNSP 164 (374)
T ss_pred EecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhHHHHHhcCCEEEEeecccccCCcCCcchhh--h-ccccEEEEeCC
Confidence 99999999999988874 4789999999999999999999999999999876667777765433 2 36899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc------CCCCcEEEEecCCCcCCCCCceeEE
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF------GSIVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~------~~~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
|||||.++|.+++++|+++|+++|+++|+||+|.++.+++ ..+++... ...+++|+++||||.|++||+|+||
T Consensus 165 ~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~-~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ 243 (374)
T PRK05839 165 NNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENT-PPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGF 243 (374)
T ss_pred CCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCC-CCCCHhhhhcccCccccCcEEEEeccccccCCccceeEE
Confidence 9999999999999999999999999999999999976543 22232211 1235899999999999999999999
Q ss_pred EEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
++++. ++++.++.... ...+.+.+.|.++..++.. .+++++.+++++++++.+.+.| ++. .|
T Consensus 244 ii~~~--------~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l----~~~---~p 306 (374)
T PRK05839 244 IAGDA--------SILKKYKAYRTYLGCASPLPLQKAAAVAWLD--DEHAEFFRNIYAKNLKLAREIL----GIT---IP 306 (374)
T ss_pred EecCH--------HHHHHHHHHHhhcCCCCChHHHHHHHHHhcc--chHHHHHHHHHHHHHHHHHHhc----CCC---CC
Confidence 99864 57777776643 3456788888888877754 5778888889999988887765 332 68
Q ss_pred CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
++|+|+|++++ +..+++.++++++||.|.||..|+. ++|+||+++.+++++.+++++|+++++
T Consensus 307 ~gg~fi~~~~~--------~~~~~~~~l~~~~gi~v~pg~~f~~~~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 307 PATFYVWLPVD--------NDEEFTKKLYQNEGIKVLPGSFLGRNGIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred CeeEEEEEeCC--------ChHHHHHHHHHHCCEEEeCchhhCCCCCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 89999999986 3568888887779999999988864 489999998789999999999998874
No 50
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.1e-49 Score=380.50 Aligned_cols=362 Identities=20% Similarity=0.371 Sum_probs=294.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh-------C----CCCCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCC
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR-------S----GKFNCYATNSGIPPARRAIADYLSRDLP--YKLSA 107 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-------~----~~~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 107 (419)
+..+|+|+.... ......+.+.+.+... . .....|.++.|.++||+++|++++++++ ..+++
T Consensus 46 p~g~i~l~~aeN-----~l~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p 120 (447)
T PLN02607 46 PSGVIQMGLAEN-----QVSFDLLEEYLKQHPEASSWGGKGAPGFRENALFQDYHGLKSFRQAMASFMEQIRGGKARFDP 120 (447)
T ss_pred CCceEEEechhh-----hhhHHHHHHHHHhCchhhccccccccccchhhccCCCcchHHHHHHHHHHHHHhcCCCCCcCH
Confidence 445999999973 3456666666655432 0 1234688889999999999999998776 36899
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N 180 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 180 (419)
++|++|+|+++++..++.++++|||.|+++.|+|+++...+. ..|++++.++++.++++.++++.++++++. +
T Consensus 121 ~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~~~~~g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~ 200 (447)
T PLN02607 121 DRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDLRWRTGVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIR 200 (447)
T ss_pred HHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHHHhcCCcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCC
Confidence 999999999999999999999999999999999999987665 578899999887666788999999988753 6
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc----C--C-CCcEEEEecCCCc
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF----G--S-IVPVITLGSISKR 253 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~----~--~-~~~~i~~~s~sK~ 253 (419)
+++++++||+||||.++|.+++++|+++|+++++++|+||+|..+.|++..+.++..+ + . .++++++.||||.
T Consensus 201 vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~ 280 (447)
T PLN02607 201 VRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKD 280 (447)
T ss_pred eeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhc
Confidence 7889999999999999999999999999999999999999999988876555554332 1 1 3579999999999
Q ss_pred CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhh
Q 014769 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
|+++|+|+||+++.++ +++..++.... ...++.+.|.++..+|+... ..++++++++++++++.+.+.|+
T Consensus 281 fg~~GlRvG~ivs~n~-------~l~~~~~~~~~-~~~~s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~ 352 (447)
T PLN02607 281 LGLPGFRVGTIYSYND-------KVVTTARRMSS-FTLVSSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLR 352 (447)
T ss_pred CCCCcceEEEEEEcCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998542 46666655433 23568889999999998743 35778889999999999999999
Q ss_pred cCCCCCCCCCCCceEEEEeecCccccc-CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeec-CHHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLE-DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDGLGR 407 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~-~~~~l~~~l~~ 407 (419)
+. ++. +..|++|+|+|++++..... ......++..++++++||.+.||..|+. ++|+||+++. +++++++++++
T Consensus 353 ~~-gi~-~~~~~ag~fvw~~L~~~~~~~~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~~~~~~l~~gl~R 430 (447)
T PLN02607 353 RA-GIE-CLKGNAGLFCWMNLSPLLETPTREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFANMSEDTLEVALKR 430 (447)
T ss_pred hC-CCC-cccCCeeEEEEEEchHhhcCCCchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEeccCCHHHHHHHHHH
Confidence 87 777 45789999999999742110 0112346777888888999999999875 6899999985 89999999999
Q ss_pred HHHHHHHHhc
Q 014769 408 MKAFCQRHTK 417 (419)
Q Consensus 408 l~~~~~~~~~ 417 (419)
|.++++++.+
T Consensus 431 i~~~l~~~~~ 440 (447)
T PLN02607 431 IHRFMDRRKT 440 (447)
T ss_pred HHHHHHHHHh
Confidence 9999987654
No 51
>PRK09082 methionine aminotransferase; Validated
Probab=100.00 E-value=2.1e-49 Score=375.83 Aligned_cols=350 Identities=21% Similarity=0.321 Sum_probs=299.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a 119 (419)
+.++|+|+.|.|. ++.++.+.+++.+.+... ...|++..|.+++|+++++++.+.++...+++ +|++|+|++++
T Consensus 29 ~~~~i~l~~g~~~----~~~~~~~~~~~~~~~~~~-~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~a 103 (386)
T PRK09082 29 EHGAINLSQGFPD----FDGPPYLVEALAYAMAAG-HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEA 103 (386)
T ss_pred hCCEEEecCCCCC----CCCCHHHHHHHHHHHHcC-CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHH
Confidence 4578999999864 455778888888877654 35799999999999999999998888777775 89999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.+++.+||+|++++|+|..+...++..|.+++.++++. .++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 104 l~~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~ 182 (386)
T PRK09082 104 LFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQP-PDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSA 182 (386)
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCc-ccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCH
Confidence 9999999999999999999999999999999999999999864 357899999999998888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++++++|+||+|.++.+++....++..+.. .+++++++||||.|+++|+|+||++++. ++
T Consensus 183 ~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~~--------~l 254 (386)
T PRK09082 183 ADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPA--------AL 254 (386)
T ss_pred HHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCCH--------HH
Confidence 99999999999999999999999999887654445444433 4689999999999999999999999865 67
Q ss_pred HHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
++.++.... ..++++.+.|.++..+++. ..+++++.+..++++++.+.+.|++. ++. +..|++|+|+|++++..
T Consensus 255 ~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~~~g~~~~~~~~~~~-- 329 (386)
T PRK09082 255 SAEFRKVHQYNTFTVNTPAQLALADYLRA-EPEHYLELPAFYQAKRDRFRAALANS-RFK-LLPCEGTYFQLVDYSAI-- 329 (386)
T ss_pred HHHHHHHHhhhcCCCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccCCCeeEEEEEecccc--
Confidence 787777653 3567899999999999874 35778888999999999999999986 777 55789999999998741
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.+ .++.+++.++++++||.+.||+.|+. .+++|++++.+++++++++++|++
T Consensus 330 ~~-~~~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~~~~~~~l~~~~~rl~~ 385 (386)
T PRK09082 330 SD-LDDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCFAKQEETLDAAAERLCQ 385 (386)
T ss_pred CC-CCHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEecCCHHHHHHHHHHHhh
Confidence 01 25778888888899999999998853 479999998889999999999975
No 52
>PRK07777 aminotransferase; Validated
Probab=100.00 E-value=5.4e-49 Score=373.60 Aligned_cols=354 Identities=27% Similarity=0.433 Sum_probs=297.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a 119 (419)
..++++|+.|.|.. +.++.+.+++.+.+... ...|+++.|.+++|+++++++.+.+|...+++ +|++|+|++++
T Consensus 23 ~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~a 97 (387)
T PRK07777 23 RTGAVNLGQGFPDE----DGPPEMLEAAQEAIAGG-VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEA 97 (387)
T ss_pred hCCeEEccCCCCCC----CCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 45789999999763 33456777777776543 35799989999999999999988888888886 79999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
+..++.+++.+||+|+++.|+|..+...++..|..++.++++++ .++.+|++.+++.++++++++++++|+||||.+++
T Consensus 98 l~~~~~~~~~~gd~vli~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~ 177 (387)
T PRK07777 98 IAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLT 177 (387)
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhhHHHHHHCCCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCC
Confidence 99999999999999999999999999999999999999988765 36789999999998888899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++++++|+||+|.++.|++....++..+.. .+++++++||||.|+++|+|+||++++. +
T Consensus 178 ~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~--------~ 249 (387)
T PRK07777 178 AAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA--------P 249 (387)
T ss_pred HHHHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH--------H
Confidence 999999999999999999999999999886654444444432 4578999999999999999999999865 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+..... .....+.+.|.++..++... ..++++.++.++++++.+.+.|+++ ++. +..|++++|+|++++...
T Consensus 250 l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~g~~~~~~~~~~~~ 326 (387)
T PRK07777 250 LIAAVRAAKQYLTYVGGAPFQPAVAHALDHE-DAWVAALRDSLQAKRDRLAAGLAEA-GFE-VHDSAGTYFLCADPRPLG 326 (387)
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHhC-CCC-ccCCCcceEEEecccccC
Confidence 7777776543 24456777888888888653 5778888999999999999999987 777 557889999999875311
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC-----CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL-----KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
..++.+++.+|++++||.|.||..|+. .+++||+++.+++++++++++|+++..
T Consensus 327 ---~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~~ 385 (387)
T PRK07777 327 ---YDDGTEFCRALPERVGVAAIPMSVFYDPADAWNHLVRFAFCKRDDTLDEAIRRLRALRG 385 (387)
T ss_pred ---CCCHHHHHHHHHHhCCEEEeCchHhCCCCcCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 125688999998889999999998863 468999998889999999999988764
No 53
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=100.00 E-value=1.8e-49 Score=383.04 Aligned_cols=386 Identities=18% Similarity=0.340 Sum_probs=295.5
Q ss_pred hCCchhHHHHHHHHHHh-hhcCC-CCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHH-------hCCCCCCCCCCCCCHH
Q 014769 19 AAPAVTVKTSLASIIDS-VNKND-PRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAV-------RSGKFNCYATNSGIPP 88 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~-~~~~~-~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~-------~~~~~~~Y~~~~g~~~ 88 (419)
-.+++.....-+..... +.... +..+|+|+...... .+. ..+.+.+.....+ .......|++..|.++
T Consensus 21 ~~~~~~~~~~~~~~~~~~y~~~~np~g~i~l~~aEN~l--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~ 98 (496)
T PLN02376 21 HGENSEYFDGWKAYDKDPFHLSRNPHGIIQMGLAENQL--CLDLIKDWVKENPEASICTLEGIHQFSDIANFQDYHGLKK 98 (496)
T ss_pred cCCCCchHHHHHHHhCCCCCcccCCCceEEeecchhhh--hHHHHHHHHHhCchhhccccccccccchhhccCCCCCcHH
Confidence 34445555544333332 11112 34689999985320 011 2344444332211 0123446888999999
Q ss_pred HHHHHHHHHHhhCC--CCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCC
Q 014769 89 ARRAIADYLSRDLP--YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERN 165 (419)
Q Consensus 89 lr~~ia~~l~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~ 165 (419)
||++||+|+.+.+| +.+++++|++|+|++++++.++.++++|||.|++++|+|+.+...+. ..|++++.++++.+++
T Consensus 99 LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~~G~~vv~v~~~~~~~ 178 (496)
T PLN02376 99 FRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDRDLRWRTGVEIIPVPCSSSDN 178 (496)
T ss_pred HHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHHHHHhhCCCEEEEEeCCCCcc
Confidence 99999999998877 66899999999999999999999999999999999999999988776 5899999999876667
Q ss_pred cccChHHHHHhh------cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-
Q 014769 166 WEVDLDAVEALA------DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF- 238 (419)
Q Consensus 166 ~~~~~~~l~~~~------~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~- 238 (419)
++++++.++.++ ..+++++++++|+||||.+++.+++++|+++|+++++++|+||+|..+.|++..+.++..+
T Consensus 179 ~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~~~f~~~~~~si~~l~ 258 (496)
T PLN02376 179 FKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAATVFAGGDFVSVAEVV 258 (496)
T ss_pred CcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCcccHHHhh
Confidence 889999987653 2367889999999999999999999999999999999999999999998877655554433
Q ss_pred ---CC----CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--h
Q 014769 239 ---GS----IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--E 309 (419)
Q Consensus 239 ---~~----~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~ 309 (419)
+. .++++++.||||.|++||+|+||++++++ .+.+.++.... .+.++.+.|.++..+|+... .
T Consensus 259 ~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~-------~l~~~~~~~~~-~~~vs~~~Q~a~~~~L~d~~~~~ 330 (496)
T PLN02376 259 NDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFND-------SVVSCARKMSS-FGLVSSQTQLMLASMLSDDQFVD 330 (496)
T ss_pred ccccccccCCCeEEEEEeccccCCCCcceEEEEEECCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhCChhHHH
Confidence 11 13567899999999999999999998652 35555544333 34578899999999998643 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--cCCCCHHHHHHHHHHhcCeEeecCCCCCC-
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--EDINDDIEFALKLAKEESVIVTPGIYVGL- 386 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~~~~~~~~ll~~~gv~v~~g~~~~~- 386 (419)
.++.+.+++++++++.+.+.|++. ++. +..|.+|+|+|++++.... ....+..+++..++++.||.+.||+.|+.
T Consensus 331 ~~l~~~r~~l~~r~~~l~~~L~~~-gi~-~~~~~aG~flwi~l~~~~~~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~ 408 (496)
T PLN02376 331 NFLMESSRRLGIRHKVFTTGIKKA-DIA-CLTSNAGLFAWMDLRHLLRDRNSFESEIELWHIIIDKVKLNVSPGSSFRCT 408 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCceEEEEEEchhhhccCCchhHHHHHHHHHHHcCCEEEeCccccCCC
Confidence 556677889999999999999886 777 4478999999999975211 11112357888888888999999999964
Q ss_pred -CCeEEEEee-cCHHHHHHHHHHHHHHHHHHh
Q 014769 387 -KNWLRIAFC-AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 387 -~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++||||+++ .+++++++++++|++++.+..
T Consensus 409 ~~g~~Ri~fa~~~~~~l~~al~rl~~~l~~~~ 440 (496)
T PLN02376 409 EPGWFRICFANMDDDTLHVALGRIQDFVSKNK 440 (496)
T ss_pred CCCEEEEEeeCCCHHHHHHHHHHHHHHHHHhh
Confidence 689999997 588999999999999997554
No 54
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=100.00 E-value=3.4e-49 Score=378.05 Aligned_cols=356 Identities=23% Similarity=0.376 Sum_probs=306.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--C-CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--K-FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
+..++|+.|.|.. ...+...+.+++.+.++.. . ...|.++.|..+||+.|++++...+|+.+++++|++|+|+++
T Consensus 89 ~~~i~f~~g~p~~--~~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~ 166 (459)
T COG1167 89 PSVIDFAGGLPDP--SLFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQ 166 (459)
T ss_pred CceecCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHH
Confidence 8899999998653 3445677777777776432 2 468898899999999999999988999999999999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC--CCccccC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP--GNPCGNV 196 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p--~nptG~~ 196 (419)
|++.+++.+++|||+|++++|+|++...+++..|.++..++++. .++|+|+|++.+......+++++| +||||.+
T Consensus 167 al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~vp~d~---~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~t 243 (459)
T COG1167 167 ALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPVPVDE---DGIDPEALEEALAQWKPKAVYVTPTFQNPTGVT 243 (459)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEecCCCC---CCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCc
Confidence 99999999999999999999999999999999999999999863 368999999998864344444555 8999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+|.++.++|+++|+++|++||+||+|+.+.|++.+.+++..++..++||+++||||. .+||+|+||++++.
T Consensus 244 ms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~-l~PglRlG~vv~p~-------- 314 (459)
T COG1167 244 MSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT-LAPGLRLGYVVAPP-------- 314 (459)
T ss_pred cCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCChHhhCCCCCEEEEeeehhh-cccccceeeeeCCH--------
Confidence 999999999999999999999999999999998887788888888899999999999 69999999999986
Q ss_pred hHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCCCCceEEEEeecC
Q 014769 277 GIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI-PCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 277 ~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~p~~g~~~~~~~~ 353 (419)
++++.+.... ..+.+++.+.|.+++..+.++. ..++.+++..++++++.+.+.|++. |+...+..|.+|+|+|++++
T Consensus 315 ~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~ 394 (459)
T COG1167 315 ELIEKLLRLKQAADLGPSSLSQAALAAFLLSGHYDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELP 394 (459)
T ss_pred HHHHHHHHHHHHhcCCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeeecCCceEEEEEEcC
Confidence 6788888775 3467889999999999998654 7889999999999999999999984 43444778999999999998
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeec-CCCCCC----CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTP-GIYVGL----KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~~----~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.. .+..+++..+ .++||.+.| |..|.. .+++|++++ .+++++++++.+|.+++++...
T Consensus 395 ~~-----~~~~~l~~~a-~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~~~~ 458 (459)
T COG1167 395 EG-----IDARELLAAA-LEKGVVVTPLGSAFSADGDPRNGLRLSFSSPSEEEIEEGIKRLAALLREAAA 458 (459)
T ss_pred CC-----CCHHHHHHHH-HHCCCEEEcCCccccCCCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 64 2567777766 556999999 888865 348999995 6799999999999999988653
No 55
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=100.00 E-value=5.7e-49 Score=368.15 Aligned_cols=341 Identities=24% Similarity=0.376 Sum_probs=288.7
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHH
Q 014769 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEV 122 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~ 122 (419)
+++|+.|+|. +++++.+.+++.+... ....|+++.|..+||+++++|+.+.+|+.++++ +|++|+|+++++..
T Consensus 2 ~~~~~~g~p~----~~~~~~~~~~~~~~~~--~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~ 75 (350)
T TIGR03537 2 LFDFGTGDPK----EPTPPFIRKALIDAVP--EVSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFH 75 (350)
T ss_pred eEeccCCCCC----CCCCHHHHHHHHHHHh--ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHH
Confidence 6899999864 5667889999888764 355799999999999999999999889889998 99999999999999
Q ss_pred HHHHhcCCC---CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 123 ILSVLARPG---ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 123 ~~~~l~~~g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
++.+++++| |+|+++.|+|..+...++..|.+++.+++++++++.+|++.++.++.++++++++++|+||||.+++.
T Consensus 76 ~~~~~~~~g~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~ 155 (350)
T TIGR03537 76 FPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPR 155 (350)
T ss_pred HHHHHcCCCCCCceEEEcCCCCcchHHHHHhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCH
Confidence 999999887 69999999999999999999999999998766678899999999988889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+++|+++|+++|+||+|..+.+++ ...++..++ .+++++++||||.++++|+|+||++++. ++.
T Consensus 156 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~-~~~~i~~~s~SK~~g~~GlRiG~~~~~~--------~~~ 225 (350)
T TIGR03537 156 SYLKETIAMCREHGIILCSDECYTEIYFGE-PPHSALEVG-IENVLAFHSLSKRSGMTGYRSGFVAGDE--------KLI 225 (350)
T ss_pred HHHHHHHHHHHHcCcEEEEeccccccccCC-CCCchhhcC-cCCEEEEeecccccCCccccceeeecCH--------HHH
Confidence 999999999999999999999999877654 233333333 3589999999999999999999998754 577
Q ss_pred HHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 280 DSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 280 ~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
+.++.... ...+.+...|.++...+.. ..++++.+.+++++++.+.+.|++. ++. +..|++|+|+|++++..
T Consensus 226 ~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~r~~l~~~~~~~~~~l~~~-g~~-~~~~~g~~~~~~~~~~~--- 298 (350)
T TIGR03537 226 SFLRKLRANFGVASPDFVQAAAKAAWSD--DNHVLERRKIFKRKRDLFIEFFNKV-GLE-YLYPDATFYLWVKVPSG--- 298 (350)
T ss_pred HHHHHHHHhhccCCCHHHHHHHHHHhCC--cHHHHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCeEEEEEEECCCC---
Confidence 77776543 2334455677777777764 5678888899999999999999887 776 55888999999999752
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.++.+++..|+ ++||.|.||..|+. ++++||+++.+++++++++++|++
T Consensus 299 --~~~~~l~~~L~-~~gv~v~~g~~f~~~~~~~~Ri~~~~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 299 --IDAKDYALRLL-ENGIVVAPGENFGSGEEGYVRVALVPTLEECEEALRLWER 349 (350)
T ss_pred --CCHHHHHHHHH-HCCEEEcCchhhCCCCCCEEEEEecCCHHHHHHHHHHHhc
Confidence 24677887775 47999999999865 589999998788999999999875
No 56
>PRK08175 aminotransferase; Validated
Probab=100.00 E-value=1.6e-48 Score=370.92 Aligned_cols=356 Identities=21% Similarity=0.343 Sum_probs=295.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~ 118 (419)
.+.++++|+.|+|.. +.++.+.+++.+.+.......|+++.|.+++|+++++|+.+.+|..++++ +|++|+|+++
T Consensus 27 ~~~~~i~l~~g~p~~----~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~ 102 (395)
T PRK08175 27 RGEDIIDFSMGNPDG----PTPPHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKE 102 (395)
T ss_pred cCCCeEEcCCCCCCC----CCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHH
Confidence 478899999998753 34566777777776555556899999999999999999998889888887 8999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeCCCCcccc
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGN 195 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~ 195 (419)
++..++..++++||+|++++|+|+.+...++..|.++..+++++++. ..+.++++++ ++++++++++|+||||.
T Consensus 103 ~l~~~~~~~~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~---~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~ 179 (395)
T PRK08175 103 GLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVD---FFNELERAIRESYPKPKMMILGFPSNPTAQ 179 (395)
T ss_pred HHHHHHHHhCCCCCEEEEcCCCCcchHHHHHHcCCeEEEEecccCCC---cHHHHHHHHhhccCCceEEEEeCCCCCCCC
Confidence 99999999999999999999999999888899999999998865433 3677777665 36788999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 274 (419)
+++.+++++|+++|+++|+++|+||+|..+.+++...+++..+.. .+.+++++||||.|++||+|+||+++++
T Consensus 180 ~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~~~------ 253 (395)
T PRK08175 180 CVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVGNP------ 253 (395)
T ss_pred CCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeCCH------
Confidence 999999999999999999999999999998887654445444432 3467899999999999999999999854
Q ss_pred hhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769 275 KSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 275 ~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~ 353 (419)
++++.+...... ..+++.+.|.++..++.. ...++++.+..++++++.+.+.|+.+ ++. +..|++|+|+|++++
T Consensus 254 --~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~-~~~p~~g~~i~i~l~ 328 (395)
T PRK08175 254 --ELVSALARIKSYHDYGTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWM-VEMPKASMYVWAKIP 328 (395)
T ss_pred --HHHHHHHHHHhhcccCCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCEEEEEEEECC
Confidence 688877766542 456677788888888864 35678888999999999999999988 676 557889999999997
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.... ..++.+++.++++++||.|.||..|+. ++++||+++.+++++.+++++|.+++++.
T Consensus 329 ~~~~--~~~~~~~~~~l~~~~gv~v~p~~~f~~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~ 390 (395)
T PRK08175 329 EPYA--AMGSLEFAKKLLNEAKVCVSPGIGFGDYGDTHVRFALIENRDRIRQAIRGIKAMFRAD 390 (395)
T ss_pred cccC--CCCHHHHHHHHHHhCCEEEeCchhhCcCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 5310 013678888888889999999998865 46999999888999999999999998753
No 57
>PRK09275 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9e-49 Score=374.46 Aligned_cols=382 Identities=18% Similarity=0.282 Sum_probs=291.6
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCC-------CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPR-------PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR 91 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 91 (419)
-+......+|.+++...+.++++. ++|+|+.|.|. +++++.+.+++ +.+.. ..|+++.|.+++|+
T Consensus 70 ~~g~~~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~v~e~~-~~~~~---~~Y~~~~g~~~lre 141 (527)
T PRK09275 70 LGGMPQKEGIEERFEAFLEEHKDVPGIDFLRDAVSYVRDQLG----FDADEFVYELV-DGIIG---DNYPVPDRMLKHTE 141 (527)
T ss_pred cCCCcccccHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHHHHHH-HHHhc---CCCCCCCCCHHHHH
Confidence 445555666777777777776554 37999999964 66778887744 55432 25999999999999
Q ss_pred HHHHHHHh-hCCCCC-C--CCcEEEcccHHHHHHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhhcCCE--EEEEec
Q 014769 92 AIADYLSR-DLPYKL-S--ADDVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQRKQVE--VRHFDL 160 (419)
Q Consensus 92 ~ia~~l~~-~~~~~~-~--~~~i~~t~g~~~al~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g~~--~~~~~~ 160 (419)
+|++++.+ ..+... . .++|++|+|+++++..++.+ +++|||+|++++|+|+.|...+...|.. ++.++.
T Consensus 142 aia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~l~g~~~~~v~v~~ 221 (527)
T PRK09275 142 KIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPELPRYDLEVVHINA 221 (527)
T ss_pred HHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHHHcCCCeEEEEeec
Confidence 99995544 333222 2 34899999999999999986 6889999999999999999888877654 455555
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCcccc
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+++++|.+|++.++++++++++++++++|+||||.+++.+++++|+++|++ ++++||+||+|..+.+. +.++...
T Consensus 222 ~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~s~~~~ 298 (527)
T PRK09275 222 DEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVDD---FRSLFAV 298 (527)
T ss_pred CcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhccc---ccCHHHh
Confidence 556679999999999988899999999999999999999999999999964 59999999999997642 2233222
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch-----------------------h---hHHHHH----Hhhh-c
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK-----------------------S---GIIDSI----KDCL-S 287 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-----------------------~---~~~~~l----~~~~-~ 287 (419)
..+++|++.||||.|+++|+|+||++++++. +++. | .+++++ +... +
T Consensus 299 -~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~~-v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~ 376 (527)
T PRK09275 299 -LPYNTILVYSFSKYFGATGWRLGVIALHEDN-VFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALN 376 (527)
T ss_pred -CCCCEEEEeehhhhccCcHhHHhhhhcCchh-HHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHh
Confidence 2257999999999999999999999987631 1100 0 112222 2332 3
Q ss_pred cccCCchHHHHH-----HHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc----
Q 014769 288 IYSDIPTFIQGA-----IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE---- 358 (419)
Q Consensus 288 ~~~~~~~~~~~a-----~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~---- 358 (419)
.+.+.+.+.|.+ +.++++. ...+++++++.++++++.+.+.|. + .+. ...|.+++|+|++++.....
T Consensus 377 ~t~~~s~p~Q~a~al~~~~all~~-~~~~~~~~~~~~~~Rr~~l~~~Lg-~-~~~-~~~p~g~fY~~~di~~~~~~~~g~ 452 (527)
T PRK09275 377 HTAGLSTPQQVQMALFSLFALLDE-EDAYKKAMKDIIRRRYKALYEGLG-L-PEP-EDPNNAAYYTLIDLEEWAEKNYGK 452 (527)
T ss_pred hccCCCCHHHHHHHHHHHHHHHhC-chHHHHHHHHHHHHHHHHHHHHcC-C-CCc-CCCCCeeEEEEEEhHHhhhhccCc
Confidence 456778888886 3344553 357889999999999999988873 2 222 23789999999998642100
Q ss_pred -------CCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 359 -------DINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 359 -------~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
...++.+++.+|++++||.+.||+.|+. .+++|+|++ .+++++.+++++|.+++.++..
T Consensus 453 ~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~Fg~~~~~vRis~a~~~~~~~~~~~~rl~~~l~~y~~ 520 (527)
T PRK09275 453 EFADYLKKNYSPVDLLFRLAEETGVVLLPGGGFGGPEWSVRVSLANLNEEDYAKIGKAIRKLLDEYYE 520 (527)
T ss_pred hhhhhhhccCCHHHHHHHHHhcCCEEEeCchhhCCCCCeEEEEEecCCHHHHHHHHHHHHHHHHHHHH
Confidence 0125788999999999999999999985 578999997 6889999999999999988754
No 58
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=100.00 E-value=6.6e-48 Score=367.31 Aligned_cols=344 Identities=20% Similarity=0.238 Sum_probs=277.5
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
.+.++|+|+.|+|. +++++.+.+++.+.+.+. ....|.++.|.++||+++++++.+. .+++++|++|+|
T Consensus 31 ~~~~~i~l~~~~~~----~~~~~~v~~~~~~~~~~~~~~~~~~~Y~p~~g~~~lr~aia~~~~~~---~~~~d~I~it~G 103 (402)
T TIGR03542 31 PSADIIRLGIGDTT----QPLPASVIEAFHNAVDELASEETFRGYGPEQGYPFLREAIAENDYRG---RIDPEEIFISDG 103 (402)
T ss_pred CCCCeEEcCCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHHHHHHHHHHHHhc---CCCHHHEEECCC
Confidence 47889999999864 466788888888877642 2357988899999999999986432 478999999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCC-----------EEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 116 CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQV-----------EVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+++++..++ .+..+||+|++++|+|..+...++..|. +++.+++++++++.++++. ..+++++
T Consensus 104 a~~al~~l~-~l~~~gd~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-----~~~~~~i 177 (402)
T TIGR03542 104 AKCDVFRLQ-SLFGSDNTVAVQDPVYPAYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPE-----EPKIDII 177 (402)
T ss_pred cHHHHHHHH-HhcCCCCEEEEeCCCCcchHHHHHHcCCccccccccccceEEEeecchhhCCCCCccc-----cCCceEE
Confidence 999999875 4557999999999999999999999999 8888887655556555432 1467899
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
++++||||||.+++.+++++|+++|++++++||+||+|..+.+++..+.++..++. .+++|+++||||.|++||+|+||
T Consensus 178 ~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~ 257 (402)
T TIGR03542 178 YLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGW 257 (402)
T ss_pred EEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCCCCcchhhCCCCcccEEEEecCccccCCCCcceEE
Confidence 99999999999999999999999999999999999999998876543344444443 35789999999999999999999
Q ss_pred EEeeCCCCccchhhHH--------HHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 264 LVTNDPNGIFQKSGII--------DSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~--------~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
++++. +++ ..+.... ....+++.+.|.++..++......+..+.+..++++++.+.+.|++.
T Consensus 258 ~i~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~- 328 (402)
T TIGR03542 258 TVVPK--------ELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA- 328 (402)
T ss_pred EEecH--------HHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99965 233 2222211 22345788899998888876444566777788999999999999887
Q ss_pred CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
++. +..|.+|+|+|++++.. .++.+++..+++++||.+.||+.|+. .+|+||+++.+++++++++++|+++
T Consensus 329 ~~~-~~~~~~~~f~~v~l~~~-----~~~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 329 GFK-VYGGEHAPYLWVKTPEG-----ISSWDFFDFLLYQYHVVGTPGSGFGPSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred Cce-ecCCCceeEEEEECCCC-----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 666 54678999999999742 25678888988888999999998865 5899999877899999999999875
No 59
>PRK06836 aspartate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-46 Score=357.85 Aligned_cols=353 Identities=22% Similarity=0.405 Sum_probs=289.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
...++++|+.|+|. +++++.+.+++.+.+... ....|++..|++++|+++++++.+.++.++++++|++|+|++
T Consensus 31 ~~~~~~~l~~g~p~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~ 106 (394)
T PRK06836 31 GADNVFDFSLGNPS----VPPPAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAA 106 (394)
T ss_pred CCCCeEEecCcCCC----CCCCHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChH
Confidence 35678999999864 456788999888877543 245798889999999999999998888889999999999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
+++..++.+++.+||.|++++|+|..+...++..|.+++.++++++ ++++|++.++++++++++++++++|+||||.++
T Consensus 107 ~al~~~~~~l~~~gd~Vli~~p~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~ 185 (394)
T PRK06836 107 GALNVALKAILNPGDEVIVFAPYFVEYRFYVDNHGGKLVVVPTDTD-TFQPDLDALEAAITPKTKAVIINSPNNPTGVVY 185 (394)
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEEecCCc-cCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCC
Confidence 9999999999999999999999999999999999999999998653 468999999999988899999999999999999
Q ss_pred CHHHHHHHHHHHHh------CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 198 TYHHLQEIAEMARK------LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 198 ~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
|.+++++|+++|++ ||+++|+||+|.++.+++....++.. ..+++++++||||.|++||+|+||++++++.
T Consensus 186 ~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~--~~~~~i~~~S~SK~~~~pGlRiG~~~~~~~~- 262 (394)
T PRK06836 186 SEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFK--YYDNSIVVYSFSKSLSLPGERIGYIAVNPEM- 262 (394)
T ss_pred CHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHH--ccCcEEEEecchhhccCcceeeEEEecCHHH-
Confidence 99999999999999 89999999999999887544333222 2357999999999999999999999986521
Q ss_pred ccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 014769 272 IFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTM 349 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 349 (419)
.....++..+...... ...++.+.|.++..++.+. ..+..++++++.+.+.|+++ ++. +..|.+|+|+|
T Consensus 263 -~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~------~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~gg~~~~ 333 (394)
T PRK06836 263 -EDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT------VDVSIYKRNRDLLYDGLTEL-GFE-CVKPQGAFYLF 333 (394)
T ss_pred -hhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh------HHHHHHHHHHHHHHHHHHhC-CCE-eecCCceEEEE
Confidence 1000112222211111 2356778899998888752 12456788889999999887 776 55888999999
Q ss_pred eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++++.. +..+++..+ .++||.+.||..|+..+++||+++.+++++++++++|++++++|.
T Consensus 334 ~~~~~~------~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~~ 393 (394)
T PRK06836 334 PKSPEE------DDVAFCEKA-KKHNLLLVPGSGFGCPGYFRLSYCVDTETIERSLPAFEKLAKEYK 393 (394)
T ss_pred EeCCCC------CHHHHHHHH-HhCCEEEECchhcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHhc
Confidence 988641 467777554 778999999999988899999999899999999999999999875
No 60
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=100.00 E-value=5.8e-48 Score=367.21 Aligned_cols=369 Identities=20% Similarity=0.202 Sum_probs=281.8
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTA-FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
..+...+..+...+.. ...+++|||+.|.|.. ...+|..+.+.+++.+.++......|+++.|.+++|++|++|+
T Consensus 7 ~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~p~~~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~ 82 (396)
T PRK09257 7 AAPADPILGLMEAFRA----DPRPDKVNLGVGVYKDEQGRTPVLRAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELL 82 (396)
T ss_pred CCCCChHHHHHHHHhh----CCCcCcEecceeeEECCCCCEeccHHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHh
Confidence 4445566665543322 2245789999997531 1122334788888888776555558999999999999999999
Q ss_pred HhhCCCCCCCCcE--EEcccHHHHHHHHHHHh--cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 98 SRDLPYKLSADDV--YVTLGCKQAVEVILSVL--ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 98 ~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l--~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
.+..+..+++++| ++|+|+++++..+++++ +++||+|++++|+|+.+...++..|.+++.+++...+++++|++.+
T Consensus 83 ~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l 162 (396)
T PRK09257 83 FGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFEAAGLEVKTYPYYDAATKGLDFDAM 162 (396)
T ss_pred cCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHHHHHHHcCCcEEEEeccccccCccCHHHH
Confidence 7765555688887 99999999999998776 4799999999999999999999999999999874344578999999
Q ss_pred HHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccC-CCCcEEEEe
Q 014769 174 EALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFG-SIVPVITLG 248 (419)
Q Consensus 174 ~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~~~i~~~ 248 (419)
++++.. ++.++++++||||||.++|.+++++|+++|+++++++|+||+|..+.++. ....++..+. ..+++|+++
T Consensus 163 ~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~ 242 (396)
T PRK09257 163 LADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVAS 242 (396)
T ss_pred HHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEE
Confidence 988752 34455668999999999999999999999999999999999999988752 2223333332 235799999
Q ss_pred cCCCcCCCCCceeEEEEeeC-CCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHHHHHHHH
Q 014769 249 SISKRWLVPGWRFGWLVTND-PNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDTLRE 321 (419)
Q Consensus 249 s~sK~~~~~G~r~G~~~~~~-~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~~~ 321 (419)
||||.|+++|+|+||+++.. +.... ..++..++... ....+++.+.|.++.+++.... .++++++++++++
T Consensus 243 SfSK~~~~~GlRiG~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~ 320 (396)
T PRK09257 243 SFSKNFGLYGERVGALSVVAEDAEEA--DRVLSQLKATIRTNYSNPPAHGAAIVATILNDPELRAEWEAELEEMRERIKA 320 (396)
T ss_pred EcCCcCccccccceeEEEEeCCHHHH--HHHHHHHHHHhhhhcCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999998999999998522 11000 02334443332 2344568888999999997642 3567788999999
Q ss_pred HHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cC
Q 014769 322 SAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AE 397 (419)
Q Consensus 322 ~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~ 397 (419)
+++.+.+.|+++. ++. +..|++|+|+|++++ .+++.++++++||.+.|. + ||+++ .+
T Consensus 321 rr~~l~~~L~~~~~~~~~~-~~~p~gg~~~w~~l~----------~~~~~~l~~~~~V~~~p~------~--ri~~~~~~ 381 (396)
T PRK09257 321 MRQLLVEALKAKGPSRDFD-FIARQRGMFSYSGLT----------PEQVDRLREEFGVYAVGS------G--RINVAGLN 381 (396)
T ss_pred HHHHHHHHHHhcCCCCCcc-cccccceEEEecCCC----------HHHHHHHHHcCCEEEcCC------C--eEEEeeCC
Confidence 9999999999862 355 458999999999874 246678889999999873 1 99996 79
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 398 PSALKDGLGRMKAFC 412 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~ 412 (419)
++++++++++|++++
T Consensus 382 ~~~i~~~~~~i~~~~ 396 (396)
T PRK09257 382 ESNIDYVAEAIAAVL 396 (396)
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999998753
No 61
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=100.00 E-value=2.1e-47 Score=367.16 Aligned_cols=339 Identities=15% Similarity=0.204 Sum_probs=280.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+..+++|+.|.|. .+++|.+.+++.+.... ...|+++.|..+||+++++++.+..+ .+++|++|+|+++++
T Consensus 84 ~~~~i~L~~g~p~----~~~~p~~~~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~~~~~~~---~~~~Iiit~G~~~al 154 (431)
T PRK15481 84 GTPLHDLAGGNPD----PQRLPDLSRYFARLSRT--PRLYGDAPVSPELHAWAARWLRDDCP---VAFEIDLTSGAIDAI 154 (431)
T ss_pred cchhhhhhcCCCC----hhHhHHHHHHHHHhhhh--hhhcCCcCCCHHHHHHHHHHHhhccC---CcCeEEEecCcHHHH
Confidence 3467899999864 34455677777765543 34799999999999999999865322 356999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe-CCCCccccCCCH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~ 199 (419)
..+++++++|||.|++++|+|+.+...++..|.+++.++++.+ ++|++.+++++++++++++++ +||||||.+++.
T Consensus 155 ~~~~~~l~~pgd~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~---g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~ 231 (431)
T PRK15481 155 ERLLCAHLLPGDSVAVEDPCFLSSINMLRYAGFSASPVSVDAE---GMQPEKLERALAQGARAVILTPRAHNPTGCSLSA 231 (431)
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCeEEeeccCCC---CCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCH
Confidence 9999999999999999999999999999999999999988532 489999999887788888887 999999999999
Q ss_pred HHHHHHHHHHHhC-CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++ +++||+||+|.++.+.+. ...+ .. ..+++++++||||.|+ ||+|+||++++. ++
T Consensus 232 ~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~-~~~~-~~-~~~~vi~~~SfSK~~~-~GlRiG~~i~~~--------~~ 299 (431)
T PRK15481 232 RRAAALRNLLARYPQVLVIIDDHFALLSSSPY-HSVI-PQ-TTQRWALIRSVSKALG-PDLRLAFVASDS--------AT 299 (431)
T ss_pred HHHHHHHHHHHhcCCceEEecCchhhhccCCC-CCCC-cC-CCCCEEEEeeeccccC-CCceeEEEeCCH--------HH
Confidence 9999999999999 999999999999876432 2222 22 2358999999999998 999999999865 57
Q ss_pred HHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 279 IDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 279 ~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
++.+..... ...+++.++|.++..+|++.. .+++++.++.++++++.+.+.|++. ++. +..|++|+|+|++++.
T Consensus 300 ~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~-~~~p~gg~f~~~~l~~-- 375 (431)
T PRK15481 300 SARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIA-IPSPGDGLNLWLPLDT-- 375 (431)
T ss_pred HHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCc-cccCCCeEEEEEECCC--
Confidence 777765433 235678999999999998754 4678889999999999999999987 776 4479999999999973
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee-cCHHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC-AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~-~~~~~l~~~l~~l~~~~~ 413 (419)
++.+++..+ .++||.+.||..|+. .+++||+++ .+++++++++++|++++.
T Consensus 376 -----~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 -----DSQATALTL-AKSGWLVREGEAFGVSAPSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred -----CHHHHHHHH-HHCCcEEecCCccccCCCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 356777776 568999999999864 368999997 578999999999999874
No 62
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=100.00 E-value=6.5e-47 Score=361.24 Aligned_cols=383 Identities=16% Similarity=0.274 Sum_probs=287.3
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCC-------CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPR-------PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR 91 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~-------~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 91 (419)
-+......+|.+++...+.++.+. ++|+|+.|+|. +++++.+ .++.+.+.. . +|+++.|..++++
T Consensus 64 ~~g~~~~~g~~~r~~~~~~~~~~~~g~~~l~~~i~l~~g~p~----~~~~~~~-~~~~~~~~~-~--~Y~~p~g~~~~~e 135 (521)
T TIGR03801 64 LGGMPQKEGIEERFETFLAENKSQPGAEFLRDIISYVIDQLG----FDPDAFL-YEMCDGIIG-D--NYPVPDRMLPHSE 135 (521)
T ss_pred cCCCcCcchHHHHHHHHHHhCCCCchHHHHHHHHhhcCCCCC----CCCCHHH-HHHHHHhhc-C--CCCCCCCCHHHHH
Confidence 445556667777777777666443 47999999975 5544444 555555432 2 5887788888888
Q ss_pred HHH-HHHHhhCCCC-CCCC--cEEEcccHHHHHHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhhc--CCEEEEEec
Q 014769 92 AIA-DYLSRDLPYK-LSAD--DVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQRK--QVEVRHFDL 160 (419)
Q Consensus 92 ~ia-~~l~~~~~~~-~~~~--~i~~t~g~~~al~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~ 160 (419)
+++ +|+.+.++.. ..++ +|++|+|+++++..++.+ +++|||+|++++|+|+.|...+... |..++.++.
T Consensus 136 ~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~l~~~g~~vv~i~~ 215 (521)
T TIGR03801 136 KIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPELPRYDFEVVRIKA 215 (521)
T ss_pred HHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHHHhcCCcEEEEeec
Confidence 888 5666654433 3333 899999999999999987 6889999999999999999887765 566777776
Q ss_pred cCCCC-----cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCC
Q 014769 161 LPERN-----WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 161 ~~~~~-----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~ 233 (419)
++.++ |.+|.++++++++++++++++++|+||||.+++.+++++|+++|+++ +++||+||+|..+.+. +.
T Consensus 216 ~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~~---~~ 292 (521)
T TIGR03801 216 DEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVDD---FR 292 (521)
T ss_pred ccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhccc---cc
Confidence 54433 89999999998888899999999999999999999999999999986 8999999999987752 23
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch------hhHHHHH------------------------H
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK------SGIIDSI------------------------K 283 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------~~~~~~l------------------------~ 283 (419)
++... ..+++|++.||||.|+++|+|+||+++++.. +++. ++..+.+ +
T Consensus 293 sl~~~-~~~~vI~v~SfSK~fg~~G~RlG~i~~~~~~-v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr 370 (521)
T TIGR03801 293 SLFAE-LPYNTIGVYSFSKYFGATGWRLGTIALHKDN-IFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSR 370 (521)
T ss_pred chhhh-CCCCEEEEEcchhhccCchhhhhhhhcCchH-HHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHH
Confidence 33232 2247999999999999999999999987531 1100 0111111 2
Q ss_pred hhh-ccccCCchHHHH-----HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 284 DCL-SIYSDIPTFIQG-----AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 284 ~~~-~~~~~~~~~~~~-----a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
... +++.+.+.+.|. ++.++++. ...+++++++.++++++.+.+.| .+ .+. ..+|.+++|+|++++....
T Consensus 371 ~v~~~~~~g~s~p~Q~q~al~a~~all~~-~~~y~~~~~~~~~~R~~~l~~~L-g~-~~~-~~~~~g~~Y~~~di~~~~~ 446 (521)
T TIGR03801 371 QVALNHTAGLSTPQQVQMALFSLFALMDK-ENAYKAETKDICRRREKLLFRGL-GL-PLQ-EDPNDVAYYTLIDLEEWAE 446 (521)
T ss_pred HHHHhccCCCCcHHHHHHHHHHHHHHhcc-chhHHHHHHHHHHHHHHHHHHhc-CC-CCc-CCCCCeEEEEEeehHHHHH
Confidence 222 334566777776 34455554 35789999999999999999988 22 222 2368899999999974211
Q ss_pred c-----------CCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhcc
Q 014769 358 E-----------DINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 358 ~-----------~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
. ...++.+++.+|++++||.+.||..|+. .+++|+|++ .+++++.++.++|++++.+|..+
T Consensus 447 ~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG~~Fg~~~~~vRisla~l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 447 KNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPGGGFGGPEWSVRVSLANLNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred HhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCchhcCCCCCeEEEEecCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 0 0125689999999999999999999986 468999997 68999999999999999988654
No 63
>PTZ00376 aspartate aminotransferase; Provisional
Probab=100.00 E-value=2.4e-47 Score=363.40 Aligned_cols=370 Identities=16% Similarity=0.179 Sum_probs=277.4
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
..+...+..+.+... +..++++|||+.|.|. ..+...+.+.+.+++.+.+......+|+++.|.+++|+++++|+
T Consensus 10 ~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~ 85 (404)
T PTZ00376 10 LGPPDPILGLAAAFK----ADPSPSKVNLGIGAYRDENGKPYVLESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLL 85 (404)
T ss_pred cCCCChHHHHHHHHh----hcCCcccEecccceeECCCCCEehhhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHh
Confidence 344455666555332 2235688999999863 22222223445555444333344568999999999999999999
Q ss_pred HhhCCCCCCCCcEE--EcccHHHHHHHHHH---HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 98 SRDLPYKLSADDVY--VTLGCKQAVEVILS---VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 98 ~~~~~~~~~~~~i~--~t~g~~~al~~~~~---~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
.+..+..+++++|+ .|.|+++++..++. +++++||+|++++|+|+.|...++..|.+++.+++.+++++++|++.
T Consensus 86 ~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~~~~~~~G~~~~~v~l~~~~~~~~d~~~ 165 (404)
T PTZ00376 86 FGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHVNIFKSAGLNVKEYRYYDPKTKGLDFDG 165 (404)
T ss_pred cCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCceeeccccCcccCCcCHHH
Confidence 76655567889998 59999999988875 66789999999999999999999999999999998555568999999
Q ss_pred HHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCccccCC-CCcEEE
Q 014769 173 VEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLFGS-IVPVIT 246 (419)
Q Consensus 173 l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~~-~~~~i~ 246 (419)
++++++ ++++++++++||||||.+++.+++++|+++|++|++++|+||+|..+.+++. ...++..+.. .+++++
T Consensus 166 l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~vi~ 245 (404)
T PTZ00376 166 MLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYAIRLFAERGVEFLV 245 (404)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 998885 3356667799999999999999999999999999999999999999988641 1222222222 247999
Q ss_pred EecCCCcCCCCCceeEEEEee-CCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc--h---HHHHHHHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLVTN-DPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK--E---DFFCKLIDTL 319 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~~~-~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~--~---~~~~~~~~~~ 319 (419)
++||||.|+++|+|+||+++. .+..+. ..+.+.+.... ....+++.++|.++..++++.. . +++++.++++
T Consensus 246 i~SfSK~~~~~GlRvG~~~~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~ 323 (404)
T PTZ00376 246 AQSFSKNMGLYGERIGALHIVCANKEEA--ANVLSQLKLIIRPMYSSPPIHGARIADRILSDPELRAEWLSELKEMSGRI 323 (404)
T ss_pred EEeCCCcccccccccceEEEEeCCHHHH--HHHHHHHHHHHhhhcCCCchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998421 111000 01333333322 2234457789999999997632 1 2355667889
Q ss_pred HHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-
Q 014769 320 RESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC- 395 (419)
Q Consensus 320 ~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~- 395 (419)
+++++.+.+.|+++. ++. +..|++|+|+|++++ .+++.+|++++||.+.||. |++++
T Consensus 324 ~~~r~~l~~~L~~~~~~~~~~-~~~p~gg~f~~~~~~----------~~~~~~L~~~~~v~v~p~~--------Ris~~~ 384 (404)
T PTZ00376 324 QNMRQLLYDELKALGSPGDWE-HIINQIGMFSFTGLT----------KEQVERLIEKYHIYLLDNG--------RISVAG 384 (404)
T ss_pred HHHHHHHHHHHHhcCCCCccc-ccccCceEEEecCCC----------HHHHHHHHHhCCEeecCCC--------eEEEec
Confidence 999999999998862 234 337899999998763 4678899898899999972 99996
Q ss_pred cCHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~ 413 (419)
.+++++++++++|++++.
T Consensus 385 ~~~~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 385 LTSKNVDYVAEAIHDVVR 402 (404)
T ss_pred cCHHhHHHHHHHHHHHHh
Confidence 899999999999998875
No 64
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=100.00 E-value=1.9e-46 Score=353.25 Aligned_cols=331 Identities=22% Similarity=0.351 Sum_probs=271.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~t~g~~~ 118 (419)
.+.++++|+.|+|. .+.++.+++++.+.... .+|+++.|.+++|+++++|+.+.+|.. +++++|++|+|+++
T Consensus 25 ~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~~---~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~ 97 (364)
T PRK07865 25 HPDGIVDLSVGTPV----DPVPPVIQEALAAAADA---PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKE 97 (364)
T ss_pred cCCCEEEcCCCCCC----CCCCHHHHHHHHHHHhh---CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHH
Confidence 46779999999864 45567888888765432 479999999999999999999988886 99999999999999
Q ss_pred HHHHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 119 AVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 119 al~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
++..++..+ +++||.|++++|+|+.+...++..|.++..++ +++.+. ..+++++++++|+||||.++
T Consensus 98 ~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~---------~~~~l~---~~~~~~v~~~~p~NPtG~~~ 165 (364)
T PRK07865 98 LVAWLPTLLGLGPGDVVVIPELAYPTYEVGARLAGATVVRAD---------SLTELG---PQRPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHHHcCCCCCEEEECCCCcccHHHHHHhcCCEEEecC---------ChhhCC---cccceEEEEcCCCCCCCccC
Confidence 999998888 78999999999999999999999999887763 122222 24678999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc---CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF---GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~---~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 274 (419)
+.+++++|+++|+++|+++|+||+|..+.+++.....+... ...+++++++||||.|+++|+|+||+++++
T Consensus 166 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~~~------ 239 (364)
T PRK07865 166 GVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDP------ 239 (364)
T ss_pred CHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEecCH------
Confidence 99999999999999999999999999988765332222110 123579999999999999999999999864
Q ss_pred hhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769 275 KSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 275 ~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~ 353 (419)
++++.++... .....++.+.|.++..+++. .+++++.+..++++++.+.+.|++. ++. +..|++|+|+|+.++
T Consensus 240 --~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~ 313 (364)
T PRK07865 240 --ALVAELLEVRKHAGMMVPAPVQAAMVAALGD--DAHVREQRERYARRRAVLRPALEAA-GFR-VDHSEAGLYLWATRG 313 (364)
T ss_pred --HHHHHHHHHHHhcCCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCCccEEEEEeCC
Confidence 5777777654 33456788899999888875 5678888899999999999999987 776 557889999999874
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
. +..++...+ .++||.+.||..|+. ++++||+++.+++++++++++|+
T Consensus 314 ~-------~~~~~~~~l-~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~~~~~~l~ 363 (364)
T PRK07865 314 E-------DCWDTVAWL-AERGILVAPGDFYGPAGAQHVRVALTATDERIAAAVERLA 363 (364)
T ss_pred C-------CHHHHHHHH-HHCCEEEeCccccCcCCCCEEEEEecCCHHHHHHHHHHhh
Confidence 2 345565555 778999999998863 67999999778999999999885
No 65
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=100.00 E-value=6.5e-48 Score=364.11 Aligned_cols=349 Identities=31% Similarity=0.525 Sum_probs=295.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHH-HHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV 120 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al 120 (419)
++|||+.|++......++.+++.+++.+ .........|+++.|.+++|+++++++.+..+...+++ +|++++|+.+++
T Consensus 2 ~~I~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~ 81 (363)
T PF00155_consen 2 DVINLGSNAPLLLSQNPPPPAAIKAAIRGAATSSSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAAL 81 (363)
T ss_dssp TEEESSSSSTSSTTSSHHHHHHHHHHHHHHHHHTGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHH
T ss_pred CEEEEECCCCCCcccccchHHHHHHHHHHhhcccccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccch
Confidence 6899999987643222355666666654 33334566999999999999999999998788888999 999999999999
Q ss_pred HHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCcc
Q 014769 121 EVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPC 193 (419)
Q Consensus 121 ~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~npt 193 (419)
..++..+ .++||+|+++.|+|+.+...++..|.++..++++.++++.+|++.|++.+++ +++++++++|+|||
T Consensus 82 ~~~~~~~~~~~~~~vlv~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPt 161 (363)
T PF00155_consen 82 FLLLRLLKINPGDTVLVPDPCYPSYIEAARLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPT 161 (363)
T ss_dssp HHHHHHHHSSTTSEEEEEESSSTHHHHHHHHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTT
T ss_pred hhhhhcccccccccceecCCccccccccccccCceeeeccccccccccccccccccccccccccccccceeeeccccccc
Confidence 9999999 7899999999999999999999999999999987778889999999998887 56789999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI 272 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 272 (419)
|.+++.+++++|+++|+++|+++|+||+|+.+.++...+.+ ...+....++++++|+||.|+++|+|+||++++.
T Consensus 162 G~~~~~~~l~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~~~---- 237 (363)
T PF00155_consen 162 GSVLSLEELRELAELAREYNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVAPP---- 237 (363)
T ss_dssp TBB--HHHHHHHHHHHHHTTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEEEH----
T ss_pred ccccccccccchhhhhcccccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccchh----
Confidence 99999999999999999999999999999999987654333 3444555569999999999999999999999965
Q ss_pred cchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769 273 FQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV 350 (419)
Q Consensus 273 ~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 350 (419)
++++.++........ +.+.|.++..++.... .+++++.+++++++++.+.+.|++. ++. +..+.+|+|+|+
T Consensus 238 ----~~~~~l~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~-~~~~~~~~~~~~ 310 (363)
T PF00155_consen 238 ----ELIERLRRFQRSGLS-SSPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GIT-VLPPEAGFFLWV 310 (363)
T ss_dssp ----HHHHHHHHHHHHTTS-SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSE-EEHHSBSSEEEE
T ss_pred ----hhhhhhhhccccccc-cchhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhh-eeeccCccEEEE
Confidence 688888877653333 7788888888887643 2388999999999999999999888 887 447779999999
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHH
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRM 408 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l 408 (419)
.++.. ++.++..+|++++||.+.||..|+.++++|+++ ..+++++++++++|
T Consensus 311 ~~~~~------~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 311 RLDPN------DAEELAQELLEEYGILVRPGSYFGVPGYIRISLASHSEEDLEEALERL 363 (363)
T ss_dssp EESHH------HHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEGGCSCHHHHHHHHHHH
T ss_pred Ecccc------hHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEeccCCHHHHHHHHhhC
Confidence 88752 467899999887799999999999999999999 67999999999986
No 66
>PLN02368 alanine transaminase
Probab=100.00 E-value=3.3e-47 Score=358.78 Aligned_cols=333 Identities=23% Similarity=0.383 Sum_probs=264.7
Q ss_pred cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCC----CCC----------------------CChHHHH
Q 014769 12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAF----PCF----------------------RTAVEAE 65 (419)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~----~~~----------------------~~~~~v~ 65 (419)
.++++..+.+...+..+.. ..+.+ +..+.++|+|++|+|... ..+ .+++.+.
T Consensus 10 ~~~~~~~~~~~~~~~~~~~-~a~~~-~~~g~~vi~l~iG~Pd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~p~~~i~ 87 (407)
T PLN02368 10 SLNENVKKCQYAVRGELYL-RASEL-QKEGKKIIFTNVGNPHALGQKPLTFPRQVVALCQAPFLLDDPNVGLLFPADAIA 87 (407)
T ss_pred hcCHHHHhhhhhcCCHHHH-HHHHH-HHHhhhhhcccCCChhHcCCCCchHHHHHHHHhcCchhcCCccccccCCHHHHH
Confidence 3455555556665555443 33333 234889999999998510 011 2456666
Q ss_pred HHHHHHHh-CCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEeeCCCCCC
Q 014769 66 DAIVDAVR-SGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWPY 143 (419)
Q Consensus 66 ~a~~~~~~-~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~~p~~~~ 143 (419)
+++..... ......|+++.|.++||++|++|+++++|..+++++|++|+|+++++..++.+++ ++||+|++++|+|+.
T Consensus 88 ~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~ 167 (407)
T PLN02368 88 RAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPL 167 (407)
T ss_pred HHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCcc
Confidence 66554322 2335689999999999999999999988988999999999999999999999987 799999999999999
Q ss_pred cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
|...+...|.+++.++++++++|++|++.+++++++ +++++++++||||||.+++.+++++|+++|+++|++||
T Consensus 168 y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II 247 (407)
T PLN02368 168 YSATISLLGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLL 247 (407)
T ss_pred HHHHHHHcCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 999999999999999988777799999999998864 57889999999999999999999999999999999999
Q ss_pred EcccccccccCCC-CCCCccc----cC----CCCcEEEEecCCCcC-CCCCceeEEEEeeC-CCCccchhhHHHHHHhhh
Q 014769 218 ADEVYGHLTFGSI-PYTPMGL----FG----SIVPVITLGSISKRW-LVPGWRFGWLVTND-PNGIFQKSGIIDSIKDCL 286 (419)
Q Consensus 218 ~De~~~~~~~~~~-~~~~~~~----~~----~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~l~~~~ 286 (419)
+||+|..+.|++. .+.++.. ++ ..+++|+++||||.| +++|+|+||+++.+ + +++++.+....
T Consensus 248 ~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~------~~li~~~~~~~ 321 (407)
T PLN02368 248 GDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIP------PKTVEEIYKVA 321 (407)
T ss_pred EEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCC------HHHHHHHHHHh
Confidence 9999999998764 3333322 11 234799999999998 79999999998521 1 15777777764
Q ss_pred ccccCCchHHHHHHHHHHcccc------hHHH---HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769 287 SIYSDIPTFIQGAIPQILEKTK------EDFF---CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 287 ~~~~~~~~~~~~a~~~~l~~~~------~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~ 353 (419)
...++++.++|.++..++.... ..+. +++...++++++.+.+.|++++|+.+ ..|+||+|+|++++
T Consensus 322 ~~~~~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~~~L~~~~g~~~-~~P~Gafy~~~~i~ 396 (407)
T PLN02368 322 SIALSPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILESLRRRARMMTDGFNSCKNVVC-NFTEGAMYSFPQIK 396 (407)
T ss_pred cccCCCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeEe-CCCCeeeEeccCCC
Confidence 4456788899999999997531 1233 44678999999999999999989884 48999999998765
No 67
>PRK06225 aspartate aminotransferase; Provisional
Probab=100.00 E-value=9.1e-46 Score=350.62 Aligned_cols=349 Identities=20% Similarity=0.328 Sum_probs=288.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|.+. +++++.+.+++.+.+.......|+++.|..++|+++++++ ++++++|++|+|+++++
T Consensus 27 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l------~~~~~~v~~~~g~t~al 96 (380)
T PRK06225 27 DKEMIWMGQNTNH----LGPHEEVREAMIRCIEEGEYCKYPPPEGFPELRELILKDL------GLDDDEALITAGATESL 96 (380)
T ss_pred cCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCCCCCCCCCcchHHHHHHHHHhc------CCCCCcEEEeCCHHHHH
Confidence 5689999998753 5678999999999887665668998899999999999998 57888999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
..++++++.+||+|++++|+|..+...++..|.+++.++++. ++++.+|++.+++.++++++++++++|+||||.+++.
T Consensus 97 ~~~~~~~~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~ 176 (380)
T PRK06225 97 YLVMRAFLSPGDNAVTPDPGYLIIDNFASRFGAEVIEVPIYSEECNYKLTPELVKENMDENTRLIYLIDPLNPLGSSYTE 176 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCCCcchHHHHHHhCceEEeeccccccCCccCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCH
Confidence 999999999999999999999988888899999999888743 3457899999999998888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+++|+++|+++|+||+|..+..+. .+...+. .++++++.||||.++++|+|+||+++++ +++
T Consensus 177 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~---~~~~~~~-~~~~i~~~s~SK~~g~~G~RiG~i~~~~--------~l~ 244 (380)
T PRK06225 177 EEIKEFAEIARDNDAFLLHDCTYRDFAREH---TLAAEYA-PEHTVTSYSFSKIFGMAGLRIGAVVATP--------DLI 244 (380)
T ss_pred HHHHHHHHHHHHCCcEEEEehhHHHHhccC---CchhhcC-CCCEEEEeechhhcCCccceeEEEecCH--------HHH
Confidence 999999999999999999999998765432 1122222 2568999999999989999999999865 577
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.......+.+.++|.++...+... .++.++.++.++++++.+.+.|++++++.+...|.+|+|+|+.++...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~a~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~~~~~~~~--- 320 (380)
T PRK06225 245 EVVKSIVINDLGTNVIAQEAAIAGLKVK-DEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPSHGNMMVIDISEAG--- 320 (380)
T ss_pred HHHHHHHhcccCCCHHHHHHHHHHHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCCCCeEEEEEccccc---
Confidence 7776654334567888888888888652 466777777788888888899988767542335677889999886421
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+..++..+|. ++||.+.||..|+. ++++|++++.+++++++++++|++++.++++
T Consensus 321 -~~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~~~ 379 (380)
T PRK06225 321 -IDPEDLVEYLL-ERKIFVRQGTYTSKRFGDRYIRVSFSIPREQVEVFCEEFPDVVETLRT 379 (380)
T ss_pred -CCHHHHHHHHH-HCCEEEcCCcccCcCCCCceEEEEeCCCHHHHHHHHHHHHHHHHHhhc
Confidence 25677877775 67999999976643 4699999988899999999999999988764
No 68
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-46 Score=350.81 Aligned_cols=328 Identities=21% Similarity=0.316 Sum_probs=273.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|.+. +++++.+.+++.+.+.. ...|++ .|..+||++|++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~-~~~~~lr~~ia~~~------~~~~~~I~it~G~~~al 95 (357)
T PRK14809 29 PDDLVKLSSNENP----HGPSPAAVEAIREAAER--VHSYPK-ASHADLTAALADRW------DVSPEQVWLANGGDGAL 95 (357)
T ss_pred ccceeEecCCCCC----CCCCHHHHHHHHHHHhh--hhcCCC-CCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 6789999999753 56677888888887653 457875 68999999999998 68899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++++++++||.|++++|+|..+...+...|..+..++++.++++.++.+.+.+... +++++++++||||||.++|.+
T Consensus 96 ~~~~~~~~~~gd~V~v~~P~y~~~~~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~~-~~k~i~l~~p~NPTG~~~s~~ 174 (357)
T PRK14809 96 DYLARAMLDPGDTVLVPDPGFAYYGMSARYHHGEVREYPVSKADDFEQTADTVLDAYD-GERIVYLTSPHNPTGSEIPLD 174 (357)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEEecccCcCCCcCHHHHHHhhc-CCcEEEEeCCCCCCCcCCCHH
Confidence 9999999999999999999999888888889999999998765677888888877653 578999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|+++|++ +++||+||+|..+.+.+. .+......+++++++||||.|+++|+|+||+++++ ++++
T Consensus 175 ~~~~l~~~~~~-~~~iI~De~y~~~~~~~~---~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~--------~~~~ 242 (357)
T PRK14809 175 EVEALAERTDE-ETLVVVDEAYGEFAERPS---AVALVEERDDVAVLRTFSKAYGLAGLRLGYAVVPE--------EWAD 242 (357)
T ss_pred HHHHHHHhCcc-CcEEEEechhhhccCCch---hHHHHhhCCCEEEEecchhHhcCcchhheeeecCH--------HHHH
Confidence 99999999875 789999999999876432 12223344689999999999999999999999875 5777
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.+..... .+..+.++|.++..++.. .+++++.++.++++++.+.+.|... . .|.+|+|+|++++
T Consensus 243 ~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~g~f~~~~~~------- 306 (357)
T PRK14809 243 AYARVNT-PFAASELACRAGLAALDD--DEHVERTVETARWAREYIREELDAP-----T-WESAGNFVLAEVG------- 306 (357)
T ss_pred HHHHhCC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHhcCc-----c-CCCCCCEEEEECC-------
Confidence 7776543 456788888888888865 6788888899999999998888642 2 3577899999874
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
+..++...+ .++||.|.||..|+.++++||+++. ++++++++++|+++++
T Consensus 307 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRls~~~-~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 307 -DASAVAEAA-QERGVIVRDCTSFGLPECIRITCGT-REETERAVEVLNEVLA 356 (357)
T ss_pred -CHHHHHHHH-HHCCEEEEECccCCCCCeEEEecCC-HHHHHHHHHHHHHHhc
Confidence 356777665 6789999999999888999999974 6899999999998874
No 69
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=100.00 E-value=9e-46 Score=354.87 Aligned_cols=372 Identities=19% Similarity=0.290 Sum_probs=280.7
Q ss_pred hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHHHHH
Q 014769 23 VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIADYLS 98 (419)
Q Consensus 23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~~l~ 98 (419)
..+...+.++.... ..+++|+|+.|+|... .++.+.+.+++.+.+... ....|+++.|.++||++|++|++
T Consensus 14 ~~~~~~~~~~~~~~---~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~ 88 (416)
T PRK09440 14 SGITQLMDDLNDGL---RTPGAIMLGGGNPAHI--PEMEDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLN 88 (416)
T ss_pred hcHHHHHHHHHHHh---cCCCceeccCCCCCcc--CCHHHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHH
Confidence 34555555554433 2367899999998632 123456777777766542 23579999999999999999999
Q ss_pred hhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----CCCeEEe-eCCCCCCcHHHHhhcC----CEEEEEeccCCC-Ccc
Q 014769 99 RDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----PGANVLL-PRPGWPYYEGIAQRKQ----VEVRHFDLLPER-NWE 167 (419)
Q Consensus 99 ~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~gd~vlv-~~p~~~~~~~~~~~~g----~~~~~~~~~~~~-~~~ 167 (419)
+.+|.++++++|++|+|+++++..++++++. +||.|++ ++|+|+.|...+...+ .....+++..+. ++.
T Consensus 89 ~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (416)
T PRK09440 89 ERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYH 168 (416)
T ss_pred HHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccC
Confidence 9899999999999999999999999999985 6899999 6999999887554333 222233332221 467
Q ss_pred cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
+|++.++ +.++++++++++||||||.+++.+++++|+++|+++++++|+||+|..+.... ....... ...+++|++
T Consensus 169 ~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~-~~~~~~~-~~~~~vI~~ 244 (416)
T PRK09440 169 VDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFPGI-IFSEATP-LWNPNIILC 244 (416)
T ss_pred CCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCCCc-chhhcCc-cccCCeEEE
Confidence 8999887 35567899999999999999999999999999999999999999997532110 0111111 114689999
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccch-HHHHH-HHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKE-DFFCK-LIDTLRESAE 324 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~-~~~~~-~~~~~~~~~~ 324 (419)
+||||. ++||+|+||++++. ++++.+..... ...+++.+.|.++..+++.... .+..+ .+..++++++
T Consensus 245 ~SfSK~-~~pGlRiG~~i~~~--------~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~ 315 (416)
T PRK09440 245 MSLSKL-GLPGVRCGIVIADE--------EIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQ 315 (416)
T ss_pred eccccc-CCCcceEEEEeCCH--------HHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHH
Confidence 999997 99999999999865 57787777653 3456789999999999987431 23333 5677888888
Q ss_pred HHHHHhhc-CCC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---------CCeEEE
Q 014769 325 ICYDGVKE-IPC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---------KNWLRI 392 (419)
Q Consensus 325 ~l~~~l~~-~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~~Ri 392 (419)
.+.+.|.+ +++ +. +..|++|+|+|++++... .++.++...+ .++||.+.||+.|+. .+++||
T Consensus 316 ~~~~~L~~~l~~~~~~-~~~p~gg~fiw~~~~~~~----~~~~~~~~~l-~~~gV~v~pg~~F~~~~~~~~~~~~~~iRi 389 (416)
T PRK09440 316 LAIALLRRYLPDEPCL-IHKPEGAIFLWLWFKDLP----ITTEELYQRL-KARGVLVVPGHYFFPGLDEDWPHAHQCIRM 389 (416)
T ss_pred HHHHHHHHhcccCCeE-EecCCCceEEEEECCCCC----CCHHHHHHHH-HHCCEEEechHhhCCCCccccCCcCceEEE
Confidence 88888876 333 33 347889999999997521 2466777665 678999999998842 258999
Q ss_pred EeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 393 AFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 393 s~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
+++.+++++++++++|++++++...+
T Consensus 390 s~~~~~~~l~~~i~~l~~~~~~~~~~ 415 (416)
T PRK09440 390 NYVQDDEEIEKGIAILAEEVEKAYAE 415 (416)
T ss_pred EecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 99778999999999999999876543
No 70
>PLN02672 methionine S-methyltransferase
Probab=100.00 E-value=7.5e-46 Score=374.40 Aligned_cols=357 Identities=15% Similarity=0.257 Sum_probs=288.0
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGC 116 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~ 116 (419)
...+.++|+|+.|+| .+++++.+++++.+.+.... + ..|+++++++|++++.+++|+..++ ++|++++|+
T Consensus 693 ~~~g~~vI~LsinE~----d~ppPp~V~eAi~eal~~~~---~--s~g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs 763 (1082)
T PLN02672 693 GSQESSLIHMDVDES----FLPVPSAVKASIFESFVRQN---I--SESETDPRPSILQFIKSNYGFPTDSCTEFVYGDTS 763 (1082)
T ss_pred ccCCCCEEEEeCCCC----CCCCCHHHHHHHHHHHhhcC---C--CCCChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCH
Confidence 345789999999985 47789999999988775432 2 3467789999999999989988765 589999999
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCC-Cccc
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPG-NPCG 194 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~-nptG 194 (419)
++++..++++++++||.|+++.|+|+.|...++..|.+++.++++++++|.+|++.+++++++ +.+.+++++|+ ||||
T Consensus 764 ~elL~lll~aLl~pGD~VLVp~PtY~~Y~~~a~~~Ga~vv~Vpl~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG 843 (1082)
T PLN02672 764 LALFNKLVLCCVQEGGTLCFPAGSNGTYVSAAKFLKANFRRIPTKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTG 843 (1082)
T ss_pred HHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEEecccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcC
Confidence 999999999999999999999999999999999999999999997667899999999999875 35689999997 9999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC--CCcc----ccCC---CCcEEEEecCCCcCCCCCceeEEEE
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY--TPMG----LFGS---IVPVITLGSISKRWLVPGWRFGWLV 265 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~----~~~~---~~~~i~~~s~sK~~~~~G~r~G~~~ 265 (419)
.+++.+++++|+++|++||++||+||+|+.+.|++... .++. .++. ..++++++||||.|+++|+|+||++
T Consensus 844 ~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylI 923 (1082)
T PLN02672 844 LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLA 923 (1082)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEE
Confidence 99999999999999999999999999999988875431 1111 1111 2379999999999999999999999
Q ss_pred eeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHH---c--ccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769 266 TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL---E--KTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCP 339 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l---~--~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 339 (419)
++++ ++++.++..... ..+....|.++..++ . ... .+++.+.++.++++++.+.+.|+++ ++. +
T Consensus 924 ap~~-------eLi~~l~~~~~~-s~~~~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~e~L~~~-Gi~-v 993 (1082)
T PLN02672 924 LNDS-------VLIDAFHSAPGL-SRPHSTLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLKETLEAC-GWD-V 993 (1082)
T ss_pred eCCH-------HHHHHHHHhhhh-cCCCcHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E
Confidence 8652 377777665332 222333444444433 2 111 3567788888999999999999987 777 5
Q ss_pred CCCCceEEEEeecCccc-------cc----C-CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHH
Q 014769 340 NKPEGSMVTMVKLNPWL-------LE----D-INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 340 ~~p~~g~~~~~~~~~~~-------~~----~-~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~ 407 (419)
..|++|+|+|++++... .. + ..++.+++.+|+++.||.+.||..|+.++|+||+++.+++++++++++
T Consensus 994 ~~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa~~~e~LeeALer 1073 (1082)
T PLN02672 994 LEPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFALEDSEFDRALKA 1073 (1082)
T ss_pred ecCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEecCCHHHHHHHHHH
Confidence 58999999999764210 00 0 125788999998888999999998888899999999999999999999
Q ss_pred HHHHHH
Q 014769 408 MKAFCQ 413 (419)
Q Consensus 408 l~~~~~ 413 (419)
|+++..
T Consensus 1074 L~kf~~ 1079 (1082)
T PLN02672 1074 IARFKE 1079 (1082)
T ss_pred HHHHHH
Confidence 998654
No 71
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=100.00 E-value=2.1e-45 Score=344.74 Aligned_cols=331 Identities=22% Similarity=0.333 Sum_probs=271.4
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~t~g~~ 117 (419)
..+.++++|+.|+|. .+.++.+.+++.+... ...|+++.|.++||+++++++.+++|.. +++++|++|+|++
T Consensus 18 ~~~~~~i~l~~~~p~----~~~~~~~~~~~~~~~~---~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~ 90 (357)
T TIGR03539 18 SHPDGIVDLSVGTPV----DPVPPLIRAALAAAAD---APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTK 90 (357)
T ss_pred hCCCCeEEccCCCCC----CCCCHHHHHHHHHHHh---hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChH
Confidence 347789999999864 4557788888877653 3479999999999999999999988886 9999999999999
Q ss_pred HHHHHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769 118 QAVEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196 (419)
Q Consensus 118 ~al~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 196 (419)
+++..++..+ .++||.|++++|+|+.+...++..|.+++.++ +++.+. ..+++++++++|+||||.+
T Consensus 91 ~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~---------~~~~l~---~~~~~~v~~~~p~NPtG~~ 158 (357)
T TIGR03539 91 ELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAAD---------DPTELD---PVGPDLIWLNSPGNPTGRV 158 (357)
T ss_pred HHHHHHHHHHcCCCCCEEEECCCCcHHHHHHHHhcCCEEeccC---------ChhhcC---ccCccEEEEeCCCCCcCcc
Confidence 9999999888 78999999999999999988898898877653 222222 2468899999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc--c-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL--F-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF 273 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 273 (419)
+|.+++++|+++|+++|+++|+||+|..+.+++.....+.. . ....++++++||||.|+++|+|+||+++++
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~~~----- 233 (357)
T TIGR03539 159 LSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAGDP----- 233 (357)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceecccCCCccccEEEEeccccccCCCceeEEEEecCH-----
Confidence 99999999999999999999999999988876533222211 0 123478999999999999999999999764
Q ss_pred chhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeec
Q 014769 274 QKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKL 352 (419)
Q Consensus 274 ~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~ 352 (419)
++++.++.... ...+++.+.|.++..+++. ..++++.+..++++++.+.+.|++. ++. +..|.+|+|+|+++
T Consensus 234 ---~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~L~~~-g~~-~~~p~~~~~~~~~~ 306 (357)
T TIGR03539 234 ---ALVAELLTVRKHAGLMVPAPVQAAMVAALGD--DGHVAEQKARYAARRAQLKPALEKA-GFR-IDHSEAGLYLWATR 306 (357)
T ss_pred ---HHHHHHHHHHhhcccCCCHHHHHHHHHHcCC--HHHHHHHHHHHHHHHHHHHHHHHHc-CCC-CcCCCccEEEEEEC
Confidence 57777766543 2456788899999888865 5667788889999999999999886 776 55889999999987
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769 353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l 408 (419)
+. +..++...+ .++||.|.||..|+. ++++||+++.+++++++++++|
T Consensus 307 ~~-------~~~~~~~~l-~~~gV~v~pg~~f~~~~~~~iRis~~~~~~~i~~~~~~l 356 (357)
T TIGR03539 307 GE-------DAWDTVDRL-AELGILVAPGDFYGPAGSQHVRVALTATDERIAAAVARL 356 (357)
T ss_pred CC-------CHHHHHHHH-HhCCEEECCccccCCCCCCeEEEEecCCHHHHHHHHHhh
Confidence 52 355666555 778999999998864 5799999988889999999876
No 72
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.8e-45 Score=344.35 Aligned_cols=334 Identities=18% Similarity=0.316 Sum_probs=272.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
..++++|+.|.+. .++++.+.+++.+.+.. ...|+++ +..+||+++++|+ ++++++|++|+|+++++
T Consensus 18 ~~~~~~l~~~~~~----~~~p~~~~~a~~~~~~~--~~~Y~~~-~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~l 84 (354)
T PRK06358 18 KNMILDFSANINP----LGVPESLKQAITENLDK--LVEYPDP-DYLELRKRIASFE------QLDLENVILGNGATELI 84 (354)
T ss_pred ccceEEecCCCCC----CCCCHHHHHHHHHHHHh--hhcCCCc-cHHHHHHHHHHHh------CCChhhEEECCCHHHHH
Confidence 3457999998753 34578898998887643 4578764 6899999999998 68999999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..+++++ .+ ++|++++|+|+.+...++..|.+++.++++.++++.+| +++.+.+..+++++++++||||||.+++.+
T Consensus 85 ~~~~~~~-~~-~~v~i~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~ 161 (354)
T PRK06358 85 FNIVKVT-KP-KKVLILAPTFAEYERALKAFDAEIEYAELTEETNFAAN-EIVLEEIKEEIDLVFLCNPNNPTGQLISKE 161 (354)
T ss_pred HHHHHHh-CC-CcEEEecCChHHHHHHHHHcCCeeEEEeCccccCCCcc-HHHHHhhccCCCEEEEeCCCCCCCCccCHH
Confidence 9999987 33 68999999999999999999999999998766677888 666666666789999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|+++|+++++++|+||+|..+.+++...+.+..++..+++++++||||.|+++|+|+||++++++ .+++
T Consensus 162 ~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~-------~~~~ 234 (354)
T PRK06358 162 EMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNK-------NLAE 234 (354)
T ss_pred HHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCH-------HHHH
Confidence 999999999999999999999999988764433344445557899999999999999999999998542 4667
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.+..... .++.+.+.|.++..+++. .+++++.++.++++++.+.+.|++++++. +..|. |.|+|++++
T Consensus 235 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~~-g~f~~~~~~------- 302 (354)
T PRK06358 235 KLLQMRE-PWSINTFADLAGQTLLDD--KEYIKKTIQWIKEEKDFLYNGLSEFKGIK-VYKPS-VNFIFFKLE------- 302 (354)
T ss_pred HHHHhCC-CCcchHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-EcCCc-ceEEEEEcC-------
Confidence 7766554 467788899999999965 46778889999999999999999887766 44565 558999886
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
+..+++..++ ++||.+.||+.|+. ++++||+++.+ ++.+++++.|++++
T Consensus 303 -~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRls~~~~-~~~~~l~~~l~~~~ 353 (354)
T PRK06358 303 -KPIDLRKELL-KKGILIRSCSNYRGLDENYYRVAVKSR-EDNKKLLKALEVIL 353 (354)
T ss_pred -chHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEeCCH-HHHHHHHHHHHHHh
Confidence 2467877775 57999999999853 57999998764 45567777666553
No 73
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=3.4e-46 Score=349.85 Aligned_cols=329 Identities=18% Similarity=0.262 Sum_probs=273.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|.+ .+++++.+++++.+.+.. ...|+ ..|..+||++|++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~nen----~~~~~~~v~~a~~~~~~~--~~~Yp-~~g~~~Lr~aia~~~------~~~~~~I~vt~Gs~e~i 94 (366)
T PRK01533 28 DHSFVKLASNEN----PFGCSPRVLDELQKSWLD--HALYP-DGGATTLRQTIANKL------HVKMEQVLCGSGLDEVI 94 (366)
T ss_pred CCceEEeCCCCC----CCCCCHHHHHHHHHHHHh--cCcCC-CCCHHHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 568999999985 367888999999887654 23575 469999999999998 67899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++++++++||+|++++|+|+.|...+...|.+++.++++ ++.+|++.++++++++++++++++||||||.+++.+
T Consensus 95 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~v~~v~~~---~~~~d~~~l~~~~~~~~~~v~i~~P~NPTG~~~~~~ 171 (366)
T PRK01533 95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALN---NGVYDLDEISSVVDNDTKIVWICNPNNPTGTYVNDR 171 (366)
T ss_pred HHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCEEEEeecC---CCCcCHHHHHHHhCcCCcEEEEeCCCCCCCCCcCHH
Confidence 99999999999999999999999999999999999999874 346899999999888889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|+++|++++ ++|+||+|..+.+.+.....+..+...+++|+++||||.|+++|+|+||++++. ++++
T Consensus 172 ~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~~~--------~~~~ 242 (366)
T PRK01533 172 KLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHE--------ELIE 242 (366)
T ss_pred HHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhCCH--------HHHH
Confidence 9999999998876 677899999887654222223334445689999999999999999999999864 6888
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.... .++++.++|.++..+|+. .++.++.++..+++++.+.+.++.+ ++. + .+..|+|+|++++
T Consensus 243 ~l~~~~~-~~~~~~~~q~aa~~~l~~--~~~~~~~~~~~~~~r~~~~~~l~~~-g~~-~-~~~~~nf~~~~~~------- 309 (366)
T PRK01533 243 KLNVVRL-PFNVSSLAQKAATIAFGD--DEFIEEIVRVNTEGLRQYESFCKEN-EIP-F-YQSQTNFIFLPVE------- 309 (366)
T ss_pred HHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCc-c-CCCcCcEEEEeCC-------
Confidence 8877654 467899999999999975 5778888888888888898888887 776 4 3446789999885
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..++...| .++||.|.+ | ++++||+++.. ++.+.+++.|+++++..
T Consensus 310 -~~~~~~~~l-~~~GI~Vr~---~--~~~iRis~~~~-~~~~~l~~al~~~~~~~ 356 (366)
T PRK01533 310 -NGGEIYEAC-AHAGFIIRP---F--PNGVRITVGTR-EQNEGVISVLQQHFENK 356 (366)
T ss_pred -CHHHHHHHH-HHCCcEEcc---C--CCceEEeCCCH-HHHHHHHHHHHHHHHhc
Confidence 345676666 568999997 3 57899999874 67788888888887654
No 74
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-45 Score=348.26 Aligned_cols=336 Identities=19% Similarity=0.309 Sum_probs=271.1
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCCCCCCHHHHHHHHHHHHhhC--CCCCCCCcEEEcccHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYATNSGIPPARRAIADYLSRDL--PYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~lr~~ia~~l~~~~--~~~~~~~~i~~t~g~~~a 119 (419)
..++|+.|.| .+++++.+.+++.+.+.... ...|++ .|..+||++|++|+++.+ +..+++++|++|+|++++
T Consensus 29 ~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~a 103 (374)
T PRK02610 29 QLDRLDTNEF----PYDLPPDLKQKLAWLYQQGIESNRYPD-GGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDEL 103 (374)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHhhcccccCCCC-CchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHH
Confidence 5899999985 36778999999998776542 357865 699999999999998766 566899999999999999
Q ss_pred HHHHHHHhcCCCC-eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeCCCCccc
Q 014769 120 VEVILSVLARPGA-NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIINPGNPCG 194 (419)
Q Consensus 120 l~~~~~~l~~~gd-~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG 194 (419)
+..++.+++.+|| .|++++|+|..+...++..|.+++.+++++ +++++|+++++.+++ ++++++++++||||||
T Consensus 104 l~~~~~~~~~~g~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG 182 (374)
T PRK02610 104 IRSLLIATCLGGEGSILVAEPTFSMYGILAQTLGIPVVRVGRDP-ETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTG 182 (374)
T ss_pred HHHHHHHHcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEecCCc-ccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCC
Confidence 9988888877886 899999999999999999999999998753 358899999998876 3789999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 274 (419)
.+++.++++++.++| +++++|+||+|..+.+. . .+..+....++|+++||||.|++||+|+||++++.
T Consensus 183 ~~~s~~~l~~l~~~~--~~~~iI~De~Y~~~~~~--~--~~~~~~~~~~~ivi~SfSK~~g~~GlRiG~~v~~~------ 250 (374)
T PRK02610 183 NPLTAAELEWLRSLP--EDILVVIDEAYFEFSQT--T--LVGELAQHPNWVILRTFSKAFRLAAHRVGYAIGHP------ 250 (374)
T ss_pred CCCCHHHHHHHHhcc--CCcEEEEeccccccCcc--c--hHHHHhcCCCEEEEEecchhccCcccceeeeecCH------
Confidence 999999999999876 38999999999987532 1 12223334578999999999999999999999864
Q ss_pred hhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 275 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++++.+..... .++.+.+.|.++..+++.. ..+.+.++.. .+.++.+.+.|+.++++. + .|++|+|+|++++.
T Consensus 251 --~l~~~l~~~~~-~~~~~~~~q~a~~~~l~~~-~~~~~~~~~~-~~~r~~l~~~L~~~~~~~-~-~p~~g~f~~~~l~~ 323 (374)
T PRK02610 251 --ELIAVLEKVRL-PYNLPSFSQLAAQLALEHR-QELLAAIPEI-LQERDRLYQALQELPQLR-V-WPSAANFLYLRLSQ 323 (374)
T ss_pred --HHHHHHHHhcC-CCCCCHHHHHHHHHHhcCH-HHHHHHHHHH-HHHHHHHHHHHHhCCCcE-e-CCCcceEEEEeCCC
Confidence 57787776653 3567888999998888752 3444444444 445777888888877765 4 58889999999974
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
. .++.+++..+ .++||.+.++ .+++||+++. ++++++++++|+++++.+
T Consensus 324 ~-----~~~~~~~~~l-~~~gi~v~~~-----~~~lRls~~~-~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 324 D-----AALAALHQAL-KAQGTLVRHT-----GGGLRITIGT-PEENQRTLERLQAALTQL 372 (374)
T ss_pred C-----CCHHHHHHHH-HHCCEEEEeC-----CCeEEEeCCC-HHHHHHHHHHHHHHHhhc
Confidence 2 2466777665 6789999764 4689999986 457899999999998764
No 75
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=9.4e-46 Score=348.17 Aligned_cols=331 Identities=21% Similarity=0.277 Sum_probs=275.7
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
..++|+|+.|.+. +++++.+.+++.+.+.. . .|.+..|..++|+++++++ ++++++|++|+|+++++
T Consensus 28 ~~~~i~l~~n~~~----~~~~~~v~~a~~~~~~~--~-~~~p~~g~~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 94 (359)
T PRK03158 28 LEKIVKLASNENP----YGPSPKVKEAIAAHLDE--L-ALYPDGYAPELRTKVAKHL------GVDEEQLLFGAGLDEVI 94 (359)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHH--h-hcCCCCcHHHHHHHHHHHh------CCCHHHEEECCCHHHHH
Confidence 3478999999864 45678899998887753 2 4455579999999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++++++++||.|++++|+|+.+...+...|.++..++++ ++.+|++.+++.++++++++++++|+||||.+++.+
T Consensus 95 ~~~~~~~~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~---~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~ 171 (359)
T PRK03158 95 QMISRALLNPGTNTVMAEPTFSQYRHNAIIEGAEVREVPLK---DGGHDLEAMLKAIDEQTKIVWICNPNNPTGTYVNHE 171 (359)
T ss_pred HHHHHHHhCCCCEEEEcCCCHHHHHHHHHHcCCeEEEEecC---CCCcCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999988899999999999875 357899999988888889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++.++++.|+ +++++|+||+|..+.+++.....+...+..+++++++||||.|+++|+|+||++++. ++++
T Consensus 172 ~l~~~~~~~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~ 242 (359)
T PRK03158 172 ELLSFLESVP-SHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE--------ELIE 242 (359)
T ss_pred HHHHHHHhCC-CCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH--------HHHH
Confidence 9988888774 699999999999988765333333333445689999999999999999999999865 6778
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.+..... .++++.++|.++..+++. .++.++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++.
T Consensus 243 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~l~~~-~~~-~-~~~~g~~i~~~~~~------ 310 (359)
T PRK03158 243 KLNIARP-PFNTTRIAQYAAIAALED--QAFLKECVEKNAEGLEQYYAFCKEY-GLF-Y-YPSQTNFIFVDTGR------ 310 (359)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-e-CCCcCcEEEEECCC------
Confidence 7776654 356799999999999975 5677888888889999999999887 666 4 46668899998752
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
++.++...++ ++||.+.||..|+.++++||+++ ++++++.+++.|+++
T Consensus 311 -~~~~~~~~l~-~~gv~v~~g~~f~~~~~iRi~~~-~~~~~~~l~~al~~~ 358 (359)
T PRK03158 311 -DANELFEALL-KKGYIVRSGAALGFPTGVRITIG-LKEQNDKIIELLKEL 358 (359)
T ss_pred -CHHHHHHHHH-HCCeEEeeCCCCCCCCeEEEecC-CHHHHHHHHHHHHHh
Confidence 4677887775 57999999999988899999998 467888888888775
No 76
>PLN02397 aspartate transaminase
Probab=100.00 E-value=3.8e-45 Score=349.00 Aligned_cols=367 Identities=16% Similarity=0.181 Sum_probs=265.8
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCC-CCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGD-PTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~-~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
..+...|..+.+.. .+..+..+++|+.|+ |...+.....+.+.++....+.......|+++.|.++||+++++|+
T Consensus 29 ~~~~~~i~~~~~~~----~~~~~~~~l~l~~g~~p~~~~~p~~~~~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~ 104 (423)
T PLN02397 29 PAPPDPILGVTEAF----LADPSPVKLNLGVGAYRTEEGKPVVLNVVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLA 104 (423)
T ss_pred cCCCChHHHHHHHH----hhCCCcceEecccceeeCCCCCcccchHHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHH
Confidence 34445555554432 233467789999996 4422111223456565544444444458999999999999999999
Q ss_pred HhhCCCCCCCCcE-----EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 98 SRDLPYKLSADDV-----YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 98 ~~~~~~~~~~~~i-----~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
.+..+....+++| +.++|+.+ +...+..+..|||+|++++|+|+.|...++..|.+++.+++.+.+++++|++.
T Consensus 105 ~~~~~~~~~~~~i~~~~i~~g~Ga~~-l~~~~~~~~~pGd~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~ 183 (423)
T PLN02397 105 YGADSPAIKENRVATVQCLSGTGSLR-LGAEFLARFYPGSTIYIPNPTWGNHHNIFRDAGVPVRTYRYYDPKTRGLDFDG 183 (423)
T ss_pred cCCCCchhhcCeeEeeecccchHHHH-HHHHHHHHhCCCCEEEEeCCCchhHHHHHHHcCCeEEEeecccCcCCccCHHH
Confidence 6644333333443 33333332 33444444569999999999999999999999999999987544457899998
Q ss_pred HHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCccccC-CCCcEEE
Q 014769 173 VEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLFG-SIVPVIT 246 (419)
Q Consensus 173 l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~~-~~~~~i~ 246 (419)
+++.+. ++++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++. ...++..+. ..+++|+
T Consensus 184 l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~~~~vI~ 263 (423)
T PLN02397 184 LLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVEDGHEILV 263 (423)
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhcCCcEEE
Confidence 877664 3567778889999999999999999999999999999999999999998641 222332332 2246999
Q ss_pred EecCCCcCCCCCceeEEEE--eeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc--hH---HHHHHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLV--TNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK--ED---FFCKLIDT 318 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~--~~---~~~~~~~~ 318 (419)
++||||.|+++|+|+||++ +.+++ .. ..+.+.+.... ....+++.+.|.++..+|+... .. ++++++++
T Consensus 264 ~~SfSK~~~~~G~RvG~~v~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~ 340 (423)
T PLN02397 264 AQSYAKNMGLYGERVGALSVVCKSAD-VA--VRVKSQLKLIARPMYSNPPIHGASIVATILGDPELFSEWTKELKGMADR 340 (423)
T ss_pred EEECcccCCCccccceEEEEEeCCHH-HH--HHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999986 32211 00 01233333333 2234567788999988887631 12 36778899
Q ss_pred HHHHHHHHHHHhhcCCC----CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769 319 LRESAEICYDGVKEIPC----ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF 394 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~~~----~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~ 394 (419)
++++++.+.+.|+++ + +. +..|++|+|+|++++ .+++.+|++++||.+.++ + |+++
T Consensus 341 ~~~rr~~l~~~L~~~-~~~~~~~-~~~p~gg~fl~~~l~----------~~~~~~Ll~~~~V~v~~~------~--Ri~~ 400 (423)
T PLN02397 341 IISMRQKLYDALEAR-GSPGDWS-HITKQIGMFSFTGLN----------KEQVDRMTKEYHIYMTRD------G--RISM 400 (423)
T ss_pred HHHHHHHHHHHHHhc-CCCCCCC-cccCCceEEEecCCC----------HHHHHHHHHhCCEEECCC------C--eEEE
Confidence 999999999999987 5 66 347999999999773 358899999999999743 2 9999
Q ss_pred e-cCHHHHHHHHHHHHHHHH
Q 014769 395 C-AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 395 ~-~~~~~l~~~l~~l~~~~~ 413 (419)
+ .+++++++++++|++++.
T Consensus 401 ~~~~~~~i~~~~~~i~~~~~ 420 (423)
T PLN02397 401 AGLSSKNVPYLADAIHAVVT 420 (423)
T ss_pred eeCCHHHHHHHHHHHHHHHh
Confidence 5 899999999999999975
No 77
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=100.00 E-value=1.4e-44 Score=339.72 Aligned_cols=331 Identities=17% Similarity=0.253 Sum_probs=263.8
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
...++|+|+.|.+. +++++.+.+++.+.+.. ...|+++ +..+||++||+++ ++++++|++|+|++++
T Consensus 20 ~~~~~i~l~~~~n~----~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~~~I~it~G~~~~ 86 (360)
T PRK07392 20 PPDAILDFSASINP----LGPPESVIAAIQSALSA--LRHYPDP-DYRELRLALAQHH------QLPPEWILPGNGAAEL 86 (360)
T ss_pred CcccEEEeCCcCCC----CCCCHHHHHHHHHHHHH--hhcCCCc-CHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 35578999999642 56778888888877654 4579875 5689999999998 6789999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc---ccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW---EVDLDAVEALADKNTAAMVIINPGNPCGNV 196 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~---~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 196 (419)
+..+++++. +||.|++++|+|..+...++..|.+++.+++++++++ ..+++.++... ++++++++++||||||.+
T Consensus 87 i~~~~~~l~-~g~~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~ 164 (360)
T PRK07392 87 LTWAGRELA-QLRAVYLITPAFGDYRRALRAFGATVKELPLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKL 164 (360)
T ss_pred HHHHHHHhC-CCCeEEEECCCcHHHHHHHHHcCCeEEEEecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCC
Confidence 999999875 6899999999999999999999999999998765543 34566665543 367889999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
++.++ |.++++++++ +|+||+|..+.+++.....+..++..+++++++||||.|+++|+|+||++++.
T Consensus 165 ~~~~~---l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-------- 232 (360)
T PRK07392 165 WSREA---ILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-------- 232 (360)
T ss_pred cCHHH---HHHHHHHCCE-EEEECchhhhccCccccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH--------
Confidence 99555 5555667775 66799999998765322222234445689999999999999999999999865
Q ss_pred hHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 277 GIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 277 ~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
++++.+..... .++++.++|.++..++++ ..+.+..++.++++++.+.+.|+.++++. + .|.+|+|+|++++.
T Consensus 233 ~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~fl~~~~~~-- 305 (360)
T PRK07392 233 DRLQRWQQWRD-PWPVNGLAAAAAIAALAD--RDFQQQTWAWLPPAREALFQGLASLPGLT-P-LPSAANFLLVQSQG-- 305 (360)
T ss_pred HHHHHHHhhCC-CCCCCHHHHHHHHHHhcc--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCCEEEEEcCC--
Confidence 57777765543 467899999999999975 46677777888999999999999887876 4 46789999998863
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecC--HHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAE--PSALKDGLGRMK 409 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~--~~~l~~~l~~l~ 409 (419)
++.++..++++++||.|.||..|+. ++|+||+++.+ .+++.++++++.
T Consensus 306 -----~~~~l~~~ll~~~gv~v~pg~~f~~~~~~~iRi~~~~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 306 -----SALQLQEKLLQQHRILIRDCLSFPELGDRYFRVAVRTEAENQRLLEALAAIL 357 (360)
T ss_pred -----CHHHHHHHHHhhCCEEEEeCCCCCCCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 4678888888888999999999964 57999999764 356666666543
No 78
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.8e-44 Score=338.42 Aligned_cols=335 Identities=19% Similarity=0.300 Sum_probs=269.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
++.++|+|+.|.+ .+++++.+.+++.+.+.. ...|++ .++.++|++|++++ ++++++|++|+|++++
T Consensus 18 ~~~~~i~l~~~~~----~~~~p~~~~~a~~~~~~~--~~~y~~-~~~~~lr~~ia~~~------~~~~~~i~it~Ga~~~ 84 (356)
T PRK08056 18 SPDQLLDFSANIN----PLGMPVSLKRAIIDNLDC--AERYPD-VEYRHLHQALARHH------QVPASWILAGNGETES 84 (356)
T ss_pred ChhhEEEeccccC----CCCCCHHHHHHHHHHHHh--cccCcC-ccHHHHHHHHHHHh------CcChhhEEECCCHHHH
Confidence 3677999999974 367788999999887654 346876 46899999999998 6789999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..+++++ .+|+ +++++|+|..+...++..|.++..+++++++++.+| +++.+.+.++++++++++|+||||.+++.
T Consensus 85 l~~~~~~l-~~g~-viv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~-~~~~~~~~~~~k~v~l~~p~NPTG~~~~~ 161 (356)
T PRK08056 85 IFAVVSGL-KPRR-AMIVTPGFAEYRRALQQVGCEIRRYSLREADGWQLT-DAILEALTPDLDCLFLCTPNNPTGLLPER 161 (356)
T ss_pred HHHHHHHh-CCCC-EEEeCCCcHHHHHHHHHcCCeEEEEecccccCCCcc-HHHHHhccCCCCEEEEeCCcCCCCCCCCH
Confidence 99999987 5665 788899999999999999999999998766667777 44555566788999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+++|+++++++|+||+|.++.+++....+. +...+++++++||||.|+++|+|+||++++++ +++
T Consensus 162 ~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~--~~~~~~~i~~~S~SK~~~~~G~RiG~~v~~~~-------~~~ 232 (356)
T PRK08056 162 QLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQ--LADNPHLWVLRSLTKFYAIPGLRLGYLVNSDD-------AAV 232 (356)
T ss_pred HHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHH--hccCCCEEEEEechhhccCcchhheeeecCCH-------HHH
Confidence 999999999999999999999999987755322221 22335789999999999999999999998542 466
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .++++.+.|.++..+++. ..+.++.++.++++++.+.+.|++++++. + .|.+|+|+|++++.
T Consensus 233 ~~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~----- 302 (356)
T PRK08056 233 ARMRRQQM-PWSINAFAALAGEVILQD--RAYQQATWQWLAEEGARFYQALCALPLLT-V-WPGRANYLFLRCER----- 302 (356)
T ss_pred HHHHHhCC-CCchhHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHhcCCCcE-E-cCCCCcEEEEEcCC-----
Confidence 66665433 456777888888888864 56778888999999999999998887776 4 35568899998863
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
+..+++..|+ ++||.+.+|..|.. .+|+||+++. +++.+.+++.|+++++
T Consensus 303 --~~~~~~~~l~-~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 303 --PDIDLQRALL-TQRILIRSCANYPGLDSRYYRVAIRS-AAENERLLAALRNVLT 354 (356)
T ss_pred --ChHHHHHHHH-HCCeEEEECCCCCCCCCCEEEEEEcC-HHHHHHHHHHHHHHHc
Confidence 3567777775 57999999998843 4799999975 4566677777766543
No 79
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.6e-44 Score=339.22 Aligned_cols=333 Identities=20% Similarity=0.307 Sum_probs=268.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|.|. +.+++.+.+++.+.... ...|+++.| .++|+++++++ ++++++|++|+|+++++
T Consensus 35 ~~~~i~l~~~~~~----~~~~~~~~~al~~~~~~--~~~Y~~~~g-~~lr~~ia~~~------~~~~~~i~~t~G~~~~l 101 (371)
T PRK05166 35 VPRIAKLGSNENP----LGPSPAVRRAFADIAEL--LRLYPDPQG-RALREAIAART------GVPADRIILGNGSEDLI 101 (371)
T ss_pred CcceEEcCCCCCC----CCCCHHHHHHHHHHHHH--hhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHHH
Confidence 5689999999754 34577888888765432 457999888 59999999998 56889999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++.+++++||.|+++.|+|+.+...++..|.++..+++++ ++++|+++++++++++++++++++|+||||.++|.+
T Consensus 102 ~~~~~~~~~~gd~vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~ 179 (371)
T PRK05166 102 AVICRAVLRPGDRVVTLYPSFPLHEDYPTMMGARVERVTVTP--DLGFDLDALCAAVARAPRMLMFSNPSNPVGSWLTAD 179 (371)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCeEEEeecCC--CCCCCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999988753 467899999999888889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
++++|+++|++ ++++|+||+|..+.+++.....+..+. ..+++|+++||||.|+++|+|+||++++++ +++
T Consensus 180 ~~~~l~~~~~~-~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~-------~l~ 251 (371)
T PRK05166 180 QLARVLDATPP-ETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDP-------ELV 251 (371)
T ss_pred HHHHHHHhCCC-CcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCH-------HHH
Confidence 99999999875 889999999999886443222222222 234799999999999999999999887542 566
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.+..... .++++.++|.++..++.. .+++++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++.
T Consensus 252 ~~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~p~~g~fl~~~~~~----- 320 (371)
T PRK05166 252 GLLDRVRT-PFNVNGAAQAAALAALDD--EEHLAKGVALALAERERLKKELAEM-GYR-I-APSRANFLFFDARR----- 320 (371)
T ss_pred HHHHHhcc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCe-e-CCCcCCEEEEeCCC-----
Confidence 77765443 456788888888888865 4788888899999999999999987 666 4 56778999998752
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
++.++...++ ++||.+.||..++..+++||+++.+ ++.+.+++.|+.+
T Consensus 321 --~~~~l~~~l~-~~gi~v~p~~~~~~~~~iRi~~~~~-~~~~~l~~~l~~i 368 (371)
T PRK05166 321 --PASAVAEALL-RQGVIVKPWKQPGFETFIRVSIGSP-EENDHFVAALDKV 368 (371)
T ss_pred --CHHHHHHHHH-HCCeEEecCCCCCCCCeEEEEcCCH-HHHHHHHHHHHHH
Confidence 4677887775 4699999998777789999999853 3344444444433
No 80
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.5e-44 Score=329.14 Aligned_cols=331 Identities=23% Similarity=0.362 Sum_probs=280.9
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEEEcccHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK-LSADDVYVTLGCKQAV 120 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~~t~g~~~al 120 (419)
+++++|+.+.. .+++++.+.+++.+.+. .++.|+++ ...++++++++++ + .++++|++++|+++.|
T Consensus 22 ~~~i~LssNen----P~gp~~~~~~~~~~~~~--~~~rYPd~-~~~~l~~a~a~~~------~~~~~~~V~~gnGsde~i 88 (356)
T COG0079 22 PGIIKLSSNEN----PYGPPPKVIEAIRAALD--KLNRYPDP-DYRELRAALAEYY------GVVDPENVLVGNGSDELI 88 (356)
T ss_pred ccceeecCCCC----CCCCCHHHHHHHHHHHH--hhccCCCC-cHHHHHHHHHHHh------CCCCcceEEEcCChHHHH
Confidence 36899999963 25677888898888776 35689986 7899999999998 4 7889999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++++++.+||+|+++.|+|..|...++..|.+++.++..+ |..|++.+..++++++++|++||||||||..++.+
T Consensus 89 ~~l~~~~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~~~~---~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~ 165 (356)
T COG0079 89 ELLVRAFVEPGDTVLIPEPTFSMYEIAAQLAGAEVVKVPLKE---FRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPRE 165 (356)
T ss_pred HHHHHHhhcCCCEEEEcCCChHHHHHHHHhcCCeEEEecccc---cccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHH
Confidence 999999999999999999999999999999999999998754 78999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
+++++++.+.+ +.++|+||+|.+|.- ... +......++++++.||||.||++|+|+||++++. ++++
T Consensus 166 ~l~~l~~~~~~-~~~vVvDEAY~eF~~--~~~--~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~--------~~i~ 232 (356)
T COG0079 166 ELRALLEALPE-GGLVVIDEAYIEFSP--ESS--LELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANP--------ELIA 232 (356)
T ss_pred HHHHHHHhCCC-CcEEEEeCchhhcCC--chh--hhhccCCCCEEEEEecHHhhhcchhceeeccCCH--------HHHH
Confidence 99999999988 999999999999764 222 2222244579999999999999999999988865 7999
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.... .++.|.+++.++.++++. .+++++..+++...++++.+.|+.++ +..+ .|+.++|++++++..
T Consensus 233 ~l~~vr~-p~~v~~~a~~aa~aal~~--~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v-~pS~aNFvlv~~~~~----- 302 (356)
T COG0079 233 ALNKVRP-PFNVSSPALAAAIAALRD--ADYLEESVERIREERERLYAALKALG-LFGV-FPSQANFVLVRVPDA----- 302 (356)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHccc--HHHHHHHHHHHHHHHHHHHHHHHhCC-CCee-cCCCCcEEEEECCCc-----
Confidence 9998876 578899999999999987 48999999999999999999999984 4423 688899999998741
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
....+.+.| .++||.++.....+ .++|+||++++.+|. +.+++.|++++..
T Consensus 303 -~~~~l~~~L-~~~giivR~~~~~~~~~~~lRitvgt~een-~~ll~AL~~~~~~ 354 (356)
T COG0079 303 -EAAALAEAL-LKKGILVRDCSSVGLLPGYLRITVGTPEEN-DRLLAALREVLKG 354 (356)
T ss_pred -cHHHHHHHH-HHCCEEEEeCCCCCCCCCeEEEEeCCHHHH-HHHHHHHHHHHhc
Confidence 234555555 56799999886532 467999999997766 9999998887754
No 81
>PRK08637 hypothetical protein; Provisional
Probab=100.00 E-value=9.4e-44 Score=337.20 Aligned_cols=358 Identities=19% Similarity=0.233 Sum_probs=266.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC---CCcEEEcccHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS---ADDVYVTLGCKQ 118 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~---~~~i~~t~g~~~ 118 (419)
.+.++.++|..+........+.+.+++.+. ......+|+++.|.++||+++++++.+..+ ... .++|++|+|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~-~~~~~~~~~I~it~G~~~ 80 (388)
T PRK08637 3 ATKYNATIGMATEKGGPMYLSSLQDLLNDL-TPDEIFPYAPPQGIPELRDLWQEKMLRENP-SLSGKKMSLPIVTNALTH 80 (388)
T ss_pred ccceecceeeEecCCCcchHHHHHHHHHhh-ccccccCCCCCCCCHHHHHHHHHHHhccCc-cccccccceeeEccchHH
Confidence 355777888543222122334444443332 223456899999999999999999877543 333 368999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeCCCCcc
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIINPGNPC 193 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~npt 193 (419)
++..++.+++++||+|++++|+|+.+...+. ..|.+++.+++..+ ++++|++.++++++ +.+.++++++|||||
T Consensus 81 al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~~~~~g~~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPT 159 (388)
T PRK08637 81 GLSLVADLFVDQGDTVLLPDHNWGNYKLTFNTRRGAEIVTYPIFDE-DGGFDTDALKEALQAAYNKGKVIVILNFPNNPT 159 (388)
T ss_pred HHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHhcCCEEEEecccCC-CCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCC
Confidence 9999999999999999999999999988754 68999999987422 34689999988876 344556788899999
Q ss_pred ccCCCHHHHHHHHHHHHh-----CCCeEEEcccccccccCCCCCCCc-ccc-CCCCcE--EEEecCCCcCCCCCceeEEE
Q 014769 194 GNVFTYHHLQEIAEMARK-----LRVMVVADEVYGHLTFGSIPYTPM-GLF-GSIVPV--ITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~-~~~-~~~~~~--i~~~s~sK~~~~~G~r~G~~ 264 (419)
|.+++.+++++|+++|++ ++++||+||+|.++.|++....++ ..+ +..+++ ++++|+||.|++||+|+||+
T Consensus 160 G~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG~~ 239 (388)
T PRK08637 160 GYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVGFI 239 (388)
T ss_pred CCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceEEE
Confidence 999999999999999875 899999999999998876544332 222 233454 55679999999999999999
Q ss_pred EeeCCCCccchhhHHHHHHhh----h-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC---CC
Q 014769 265 VTNDPNGIFQKSGIIDSIKDC----L-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI---PC 335 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~----~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~---~~ 335 (419)
+++.... .++++++.+... . ...++++.++|.++..+++... ..++.+.+..++++++.+.+.|+.. ++
T Consensus 240 ~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~~~ 317 (388)
T PRK08637 240 TFGTKAG--SSQTVKEALEKKVKGLIRSNISNGPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGKYDDA 317 (388)
T ss_pred EEccccC--CcHHHHHHHHHHHHHHhhcccCCCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCC
Confidence 9753100 011455555432 1 2234678999999999997632 2345556667888888888888654 24
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~ 414 (419)
+. +..|++|+|+|++++.. ++.+++.++++++||.+.+. ..+++||+++ .+.+++++++++|.+++++
T Consensus 318 ~~-~~~~~~g~~~~~~l~~~------~~~~l~~~l~~~~gv~~~~~----~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~ 386 (388)
T PRK08637 318 WQ-AYPFNSGYFMCLKLKGV------DAEELRVHLLEKYGIGTIAL----NETDLRIAFSCVEEEDIPELFDSIYKAIKD 386 (388)
T ss_pred cc-cccccceEEEEecCChH------HHHHHHHHHhhhcceEEEec----cCCceEEEeecCCHHHHHHHHHHHHHHHHh
Confidence 55 55788999999998631 46788888878889988742 3678999996 5889999999999999986
Q ss_pred H
Q 014769 415 H 415 (419)
Q Consensus 415 ~ 415 (419)
+
T Consensus 387 ~ 387 (388)
T PRK08637 387 L 387 (388)
T ss_pred c
Confidence 5
No 82
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.8e-44 Score=337.51 Aligned_cols=327 Identities=19% Similarity=0.283 Sum_probs=265.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|.+. ++++|.+.+++.+.. ....|++ .+..+||++|++++ ++++++|++|+|+++++
T Consensus 51 ~~~~i~l~~n~~p----~~~~~~v~~a~~~~~---~~~~Yp~-~~~~~lr~~ia~~~------~~~~~~I~~t~Ga~~~i 116 (380)
T PLN03026 51 PEDIVKLDANENP----YGPPPEVLEALGNMK---FPYVYPD-PESRRLRAALAEDS------GLESENILVGCGADELI 116 (380)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHhhH---hhccCCC-CCHHHHHHHHHHHh------CcChhhEEEcCCHHHHH
Confidence 5689999999743 456677888775421 2346876 47899999999998 57889999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh-cCCccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~ 199 (419)
..++.+++++||+|++++|+|..|...++..|.++..++.+ .++.+|++.+++++ .++++++++++|+||||.+++.
T Consensus 117 ~~~~~~~~~~gd~Vlv~~P~y~~y~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~ 194 (380)
T PLN03026 117 DLLMRCVLDPGDKIIDCPPTFGMYVFDAAVNGAEVIKVPRT--PDFSLDVPRIVEAVETHKPKLLFLTSPNNPDGSIISD 194 (380)
T ss_pred HHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeecC--CCCCcCHHHHHHHHhccCCcEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999988889999999988874 35789999999988 6688999999999999999998
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++.+|++.+ +++|+||+|..+.+.+.. .......+++++++||||.|+++|+|+||++++. +++
T Consensus 195 ~~l~~l~~~~----~~vi~DeaY~~~~~~~~~---~~~~~~~~~viv~~SfSK~~glaGlRiGy~~~~~--------~~i 259 (380)
T PLN03026 195 DDLLKILELP----ILVVLDEAYIEFSTQESR---MKWVKKYDNLIVLRTFSKRAGLAGLRVGYGAFPL--------SII 259 (380)
T ss_pred HHHHHHHhcC----CEEEEECcchhhcCCcch---HHHHHhCCCEEEEecchHhhcCccccceeeecCH--------HHH
Confidence 8888887643 899999999988764321 1223344689999999999999999999999865 678
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.+..... .+..+.++|.++.++|+. .+++++.+..++++++.+.+.|++++++. + .|.+|+|+|++++..
T Consensus 260 ~~l~~~~~-~~~~~~~~q~aa~~aL~~--~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~-~p~~~~f~~~~~~~~---- 330 (380)
T PLN03026 260 EYLWRAKQ-PYNVSVAAEVAACAALSN--PKYLEDVKNALVEERERLFGLLKEVPFLE-P-YPSDANFILCRVTSG---- 330 (380)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHCCCCe-E-CCCCCeEEEEECCCC----
Confidence 88776654 356788899999998875 57888889999999999999999884444 4 688899999998631
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.++.++...|+ ++||.|.++..++.++++||+++. +++.+.+++.|++
T Consensus 331 -~~~~~~~~~l~-~~gI~v~~~~~~~~~~~lRis~~~-~~~~~~l~~al~~ 378 (380)
T PLN03026 331 -RDAKKLKEDLA-KMGVMVRHYNSKELKGYIRVSVGK-PEHTDALMEALKQ 378 (380)
T ss_pred -CCHHHHHHHHH-HCCeEEEECCCCCCCCEEEEecCC-HHHHHHHHHHHHH
Confidence 24677877775 789999998776667899999985 4455666666554
No 83
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=6.7e-44 Score=336.42 Aligned_cols=335 Identities=19% Similarity=0.307 Sum_probs=271.6
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhC--CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS--GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
..|+|+.|.| .+++++.+++++.+.+.. .....|++ .|.++||++|++|+++.+|.++++++|++|+|+++++
T Consensus 27 ~~i~l~~~~~----~~~~~~~~~~al~~~l~~~~~~~~~Y~~-~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l 101 (368)
T PRK03317 27 VPVRLNTNEN----PYPPSPALVADIAEAVAEAAAGLNRYPD-RDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEIL 101 (368)
T ss_pred ceeEecCCCC----CCCCCHHHHHHHHHHHhhhhhhhccCCC-CchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHH
Confidence 5699999985 367889999999988753 23567876 5899999999999999889899999999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~ 199 (419)
..++++++++||.|+++.|+|..+...+...|.+++.++. ++++++|++.+++++.. +++++++++|+||||.+++.
T Consensus 102 ~~~~~~~~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~ 179 (368)
T PRK03317 102 QQLLQAFGGPGRTALGFVPSYSMHPIIARGTHTEWVEGPR--AADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPL 179 (368)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHhcCCeeEEccc--CCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCH
Confidence 9999999999999999999999999999988988777664 34678999999998864 67889999999999999998
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+++| ++++|+||+|.++.+++.. ......+..+++++++||||.|+++|+|+||++++. +++
T Consensus 180 ~~l~~l~~~~---~~~lI~DE~y~~~~~~~~~-~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~~~~~--------~~~ 247 (368)
T PRK03317 180 DDVEAILDAA---PGIVVVDEAYAEFRRSGTP-SALTLLPEYPRLVVSRTMSKAFAFAGGRLGYLAAAP--------AVV 247 (368)
T ss_pred HHHHHHHHHC---CceEEEeCCchhhcccCCc-CHHHHHHhCCCEEEEEechhhhccchhhhhhhhCCH--------HHH
Confidence 8888887766 6899999999998765532 222222334578999999999999999999999865 688
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .++.+++.|.++..+++. .+.+.+..++++++++.+.+.|++. ++. +..|.+++++|..++
T Consensus 248 ~~l~~~~~-~~~~s~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~------ 316 (368)
T PRK03317 248 DALRLVRL-PYHLSAVTQAAARAALRH--ADELLASVAALRAERDRVVAWLREL-GLR-VAPSDANFVLFGRFA------ 316 (368)
T ss_pred HHHHhcCC-CCCCCHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-eCCCCCcEEEEeccC------
Confidence 88876543 467888999999888875 3445566677888899999999887 776 447788888776553
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+..++...+ .++||.+.+. +.++++||+++. +++++.+++.|++++..
T Consensus 317 --~~~~~~~~l-~~~Gv~v~~~---~~~~~iRi~~~~-~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 317 --DRHAVWQGL-LDRGVLIRDV---GIPGWLRVTIGT-PEENDAFLAALAEVLAT 364 (368)
T ss_pred --CHHHHHHHH-HHCCEEEEeC---CCCCeEEEecCC-HHHHHHHHHHHHHHHHH
Confidence 356666666 5679999874 346899999974 56789999998888754
No 84
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=5.1e-44 Score=335.84 Aligned_cols=327 Identities=22% Similarity=0.309 Sum_probs=269.7
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~a 119 (419)
+.++|+|+.|.+ .+++++.+++++.+.+.......|++ .|..++|+++++++ +..+ ++|++|+|++++
T Consensus 25 ~~~~i~l~~~~~----~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~ia~~~------~~~~~~~I~~t~G~~~~ 93 (356)
T PRK04870 25 ATGMVKLDAMEN----PYRLPAELRAELGERLAEVALNRYPD-PRAAALKAALRAAM------GVPAGADVLLGNGSDEL 93 (356)
T ss_pred CCCceeCcCCCC----CCCCCHHHHHHHHHHhhccccccCCC-CCHHHHHHHHHHHh------CcCCCCcEEEcCCHHHH
Confidence 568999999985 36789999999998887655668987 68899999999998 3343 589999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~ 198 (419)
+..++.+++++||+|++++|+|..+...++..|.+++.++++ .++.+|++.+++++.. +++++++++|+||||.++|
T Consensus 94 i~~~~~~~~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~i~~~--~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~ 171 (356)
T PRK04870 94 IQLLALACAKPGATVLAPEPGFVMYRMSAKLAGLEFVGVPLT--ADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFD 171 (356)
T ss_pred HHHHHHHhcCCCCEEEECCCCHHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999875 3578999999998864 7899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
.+++++|+++| ++++|+||+|..+.+.. ..+ .+...+++++++|||| ++++|+|+||++++. ++
T Consensus 172 ~~~~~~i~~~~---~~~ii~De~y~~~~~~~--~~~--~~~~~~~vi~~~S~SK-~~~~GlRiG~~i~~~--------~~ 235 (356)
T PRK04870 172 DADVERIIEAA---PGLVVVDEAYQPFAGDS--WLP--RLARFPNLLVMRTVSK-LGLAGLRLGYLAGHP--------AW 235 (356)
T ss_pred HHHHHHHHHHC---CCEEEEECCchhhcCcc--hHH--HHhhCCCEEEEecchh-hhhHHHhhhhhhCCH--------HH
Confidence 99999999988 67899999999875422 111 2233457999999999 799999999999865 57
Q ss_pred HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
++.++.... .++.+.++|.++..++++ .+++++.+++++++++.+.+.|++++++. + .|.+|+|+|++++
T Consensus 236 i~~~~~~~~-~~~~~~~~q~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~----- 305 (356)
T PRK04870 236 IAELDKVRP-PYNVNVLTQATALFALEH--VDVLDAQAAQLRAERTRLAAALAALPGVT-V-FPSAANFILVRVP----- 305 (356)
T ss_pred HHHHHHccC-CCcCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC-----
Confidence 777776543 356788889888888875 45688888999999999999999887876 4 5667889999886
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+..++... ++++||.|.||..|+. .+++||+++. .++.+.+++.|+++
T Consensus 306 ---~~~~~~~~-l~~~gI~v~~~~~f~~~~~~~iRis~~~-~~~~~~l~~al~~~ 355 (356)
T PRK04870 306 ---DAAAVFDG-LKTRGVLVKNLSGMHPLLANCLRVTVGT-PEENAQFLAALKAA 355 (356)
T ss_pred ---CHHHHHHH-HHHCCEEEEECCCCCCCCCCeEEEeCCC-HHHHHHHHHHHHHh
Confidence 34566655 4788999999998853 6899999985 56777777777664
No 85
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=2.5e-43 Score=332.83 Aligned_cols=336 Identities=21% Similarity=0.259 Sum_probs=277.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.+.++++|+.|.+. +++++.+.+++.+.+.. ...|++.. ..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~t~G~~~~ 96 (367)
T PRK02731 30 GIADIIKLASNENP----LGPSPKAIEAIRAAADE--LHRYPDGS-GFELKAALAEKF------GVDPERIILGNGSDEI 96 (367)
T ss_pred CCCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCc-HHHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 36789999999754 34567888888887653 45788754 479999999998 5778999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.+++++||+|++++|+|..+...+...|.+++.+++ +++.+|++.+++.+++++++|++++|+||||.+++.
T Consensus 97 l~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~---~~~~~~~~~l~~~~~~~~~~v~l~~p~nptG~~~~~ 173 (367)
T PRK02731 97 LELLARAYLGPGDEVIYSEHGFAVYPIAAQAVGAKPVEVPA---KDYGHDLDAMLAAVTPRTRLVFIANPNNPTGTYLPA 173 (367)
T ss_pred HHHHHHHhcCCCCEEEEecCCHHHHHHHHHHcCCeEEEecc---cCCCCCHHHHHHHhCCCCcEEEEeCCCCCCCcCCCH
Confidence 99999999999999999999999888888889999988876 356789999999998888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++.++++.|+ +++++|+||+|..+.+++....++..++..+++++++||||.|+++|+|+||+++++ +++
T Consensus 174 ~~l~~l~~~~~-~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~--------~~~ 244 (367)
T PRK02731 174 EEVERFLAGVP-PDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP--------EII 244 (367)
T ss_pred HHHHHHHHhCC-CCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH--------HHH
Confidence 99999988875 599999999999888755433333333344679999999999999999999999865 577
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.+..... .+..+.++|.++..+++. .+++++.++.++++++.+.+.|++. ++. + .|.+|+|+|++++..
T Consensus 245 ~~l~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~g~~~~i~~~~~---- 314 (367)
T PRK02731 245 DALNRVRQ-PFNVNSLALAAAVAALDD--DAFVEKSRALNAEGMAWLTEFLAEL-GLE-Y-IPSVGNFILVDFDDG---- 314 (367)
T ss_pred HHHHHccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCceEEEEECCCC----
Confidence 77776544 345678899999998875 5678888889999999999999988 776 4 356688999998532
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.++.++...| .++||.+.++..|+.++++|+++++ .++++.+++.|+++++
T Consensus 315 -~~~~~~~~~L-~~~gI~v~~~~~~~~~~~iRis~~~-~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 315 -KDAAEAYQAL-LKRGVIVRPVAGYGLPNALRITIGT-EEENRRFLAALKEFLA 365 (367)
T ss_pred -CCHHHHHHHH-HHCCEEEEeCCCCCCCCeEEEecCC-HHHHHHHHHHHHHHHh
Confidence 2567777776 5679999999988767899999984 6788999999988764
No 86
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.6e-43 Score=330.00 Aligned_cols=336 Identities=17% Similarity=0.223 Sum_probs=274.1
Q ss_pred CCCe-eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 41 PRPV-VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~-i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
|.++ ++|+.|++ .+++++.+.+++.+.+.. ...|+++ +..+||++||+++ ++++++|++|+|++++
T Consensus 30 g~~~~~~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~~ia~~~------~~~~~~I~it~G~~~~ 96 (369)
T PRK08153 30 GRPFRARIGANES----GFGPSPSVIAAMREAAAE--IWKYGDP-ENHDLRHALAAHH------GVAPENIMVGEGIDGL 96 (369)
T ss_pred CCcceeEecCCCC----CCCCCHHHHHHHHHHHHH--hhcCCCC-ccHHHHHHHHHHh------CCCHHHEEEcCCHHHH
Confidence 5554 69999985 467788899998877642 3478876 5899999999998 6788999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~ 198 (419)
+..++.+++++||.|++++|+|+.+...+...|.+++.++++.+ .+|++.+.+.+. .+++++++++|+||||.++|
T Consensus 97 l~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~vp~~~~---~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~ 173 (369)
T PRK08153 97 LGLIVRLYVEPGDPVVTSLGAYPTFNYHVAGFGGRLVTVPYRDD---REDLDALLDAARRENAPLVYLANPDNPMGSWHP 173 (369)
T ss_pred HHHHHHHhcCCCCEEEECCCcchHHHHHHHHcCCeEEEeeCCCC---CCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999998888889999998887432 578888877653 56889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
.+++.+++++|++ ++++|+||+|..+.+++. ..++.. ..+++++++||||.|+++|+|+||++++. ++
T Consensus 174 ~~~l~~l~~~~~~-~~~lI~DE~y~~~~~~~~-~~~~~~--~~~~~i~~~SfSK~~g~~GlRiG~~v~~~--------~~ 241 (369)
T PRK08153 174 AADIVAFIEALPE-TTLLVLDEAYCETAPAGA-APPIDT--DDPNVIRMRTFSKAYGLAGARVGYAIGAP--------GT 241 (369)
T ss_pred HHHHHHHHHhCCC-CcEEEEeCchhhhcCccc-chhhhh--cCCCEEEEecchHhccCcchheeeeecCH--------HH
Confidence 9999999998874 899999999999877543 223222 23579999999999999999999999865 57
Q ss_pred HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
++.+..... .++++.++|.++..+++. .+++++.++.++++++.+.+.|++. ++. + .|.+++|+|++++..
T Consensus 242 ~~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-g~~-~-~p~~~~f~~~~~~~~--- 312 (369)
T PRK08153 242 IKAFDKVRN-HFGMNRIAQAAALAALKD--QAYLAEVVGKIAAARDRIAAIARAN-GLT-P-LPSATNFVAIDCGRD--- 312 (369)
T ss_pred HHHHHHhhc-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCcCcEEEEECCCC---
Confidence 777776654 357899999999999974 5778888999999999999999877 665 4 578899999987521
Q ss_pred CCCCHHHHHHHHHHhcCeEee-cCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769 359 DINDDIEFALKLAKEESVIVT-PGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.....++..++ .++||.+. |+.. ..++++||+++ ++++++.+++.|++++...+|
T Consensus 313 -~~~a~~l~~~l-~~~Gi~v~~p~~~-~~~~~iRis~~-~~~~~~~~~~al~~~~~~~~~ 368 (369)
T PRK08153 313 -GAFARAVLDGL-IARDIFVRMPGVA-PLDRCIRVSCG-PDEELDLFAEALPEALEAARK 368 (369)
T ss_pred -cccHHHHHHHH-HHCCeEEeeCCCC-CCCCeEEEecC-CHHHHHHHHHHHHHHHHHhhc
Confidence 11355666666 45799994 6643 23579999998 578999999999999876654
No 87
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=2.1e-43 Score=331.77 Aligned_cols=328 Identities=17% Similarity=0.283 Sum_probs=266.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
..++|+|+.|.+. +++++.+.+++.+.+... ...|++. |..+||++||+++ ++++++|++|+|+++++
T Consensus 23 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~~-~~~y~~~-~~~~lr~aia~~~------~~~~~~I~it~G~~~al 90 (353)
T PRK05387 23 LAKLIKLNTNENP----YPPSPKVLEAIRAALGDD-LRLYPDP-NADALRQAIAAYY------GLDPEQVFVGNGSDEVL 90 (353)
T ss_pred ccceeeccCCCCC----CCCCHHHHHHHHHHhhhh-hhcCCCC-cHHHHHHHHHHHh------CCCHHHEEEcCCHHHHH
Confidence 4578999999863 556788999998876543 3578765 6799999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++++++++||.|++++|+|+.+...++..|.++..++++ .++.+|++.+++ .++.+++++||||||.++|.+
T Consensus 91 ~~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~----~~~~v~~~~P~NPtG~~~~~~ 164 (353)
T PRK05387 91 AHAFLAFFNHDRPLLFPDITYSFYPVYAGLYGIPYEEIPLD--DDFSIDVEDYLR----PNGGIIFPNPNAPTGIALPLA 164 (353)
T ss_pred HHHHHHhcCCCCEEEEeCCCHHHHHHHHHHcCCEEEEeecC--CCCCCCHHHHHh----cCCEEEEeCCCCCCCCCCCHH
Confidence 99999999999999999999999998899999999998874 356789998864 457889999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|++.++ ++++|+||+|..+. +....++ ....+++++++||||.|+++|+|+||+++++ ++++
T Consensus 165 ~~~~l~~~~~--~~~livDe~y~~~~--~~~~~~~--~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~--------~~~~ 230 (353)
T PRK05387 165 EIERILAANP--DSVVVIDEAYVDFG--GESAIPL--IDRYPNLLVVQTFSKSRSLAGLRVGFAIGHP--------ELIE 230 (353)
T ss_pred HHHHHHHhCC--CcEEEEeCcccccC--CcchHHH--HhhCCCEEEEEehhHhhcchhhhceeeecCH--------HHHH
Confidence 9999988654 89999999998753 3222222 2334578999999999999999999999864 5777
Q ss_pred HHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 281 SIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 281 ~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
.++..... .++++.+.|.++..++.. .+++++.+++++++++.+.+.|+++ ++. + .|.+++|+|++++.
T Consensus 231 ~l~~~~~~~~~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~---- 301 (353)
T PRK05387 231 ALNRVKNSFNSYPLDRLAQAGAIAAIED--EAYFEETRAKVIATRERLVEELEAL-GFE-V-LPSKANFVFARHPS---- 301 (353)
T ss_pred HHHHhhccCCCCCcCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCcCcEEEEECCC----
Confidence 77766432 356788899999888875 5678888999999999999999987 776 4 46778899998763
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.+..++...| .++||.+.+.......+++|++++ ++++++++++.|++++.
T Consensus 302 --~~~~~~~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 302 --HDAAELAAKL-RERGIIVRHFNKPRIDQFLRITIG-TDEEMEALVDALKEILA 352 (353)
T ss_pred --CCHHHHHHHH-HHCCEEEEECCCCCCCCeEEEEeC-CHHHHHHHHHHHHHHhh
Confidence 2567787777 567999976433334679999998 46899999999998765
No 88
>PRK09105 putative aminotransferase; Provisional
Probab=100.00 E-value=7.5e-43 Score=327.95 Aligned_cols=324 Identities=18% Similarity=0.174 Sum_probs=262.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
+++|+|+.|.+ .+++++.+.+++.+.+.. ...|+++ +..+||++|++++ ++++++|++|+|+++++.
T Consensus 43 ~~~i~l~~~~~----~~~~~~~~~~a~~~~~~~--~~~Y~~~-~~~~Lr~aia~~~------~v~~e~I~it~Gs~~ai~ 109 (370)
T PRK09105 43 EGAVFLNANEC----PLGPSPAARDAAARSAAL--SGRYDLE-LEDDLRTLFAAQE------GLPADHVMAYAGSSEPLN 109 (370)
T ss_pred CCcEEecCCCC----CCCCCHHHHHHHHHHHHH--hcCCCCc-hHHHHHHHHHHHh------CcChhhEEEcCChHHHHH
Confidence 56899999985 356788999999887653 2468775 4899999999987 678999999999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
.++.+++++||+|++++|+|+.+...++..|.+++.+++++ ++.+|++.+++. .++++++++++||||||.+++.++
T Consensus 110 ~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~ 186 (370)
T PRK09105 110 YAVLAFTSPTAGLVTADPTYEAGWRAADAQGAPVAKVPLRA--DGAHDVKAMLAA-DPNAGLIYICNPNNPTGTVTPRAD 186 (370)
T ss_pred HHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHH
Confidence 99999999999999999999999999999999999988753 467899999876 456889999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++++.++ +++++|+||+|..+... ++...+ +..+++++++||||.|+++|+|+||++++. ++++
T Consensus 187 l~~l~~~~~-~~~~lIvDEaY~~f~~~----~s~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~~~--------~~i~ 253 (370)
T PRK09105 187 IEWLLANKP-AGSVLLVDEAYIHFSDA----PSVVDLVAQRKDLIVLRTFSKLYGMAGMRLGLAAARP--------DLLA 253 (370)
T ss_pred HHHHHHhCC-CCcEEEEECchHHhccC----cchHHHHhhCCCEEEEecccHhhcCCccceeeeecCH--------HHHH
Confidence 999998754 58999999999876421 122222 334679999999999999999999999865 5777
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.. . .+.++.+.|.++..++.+ .+++++.+++++++++.+.+.|+++ ++. +..|++++| +++++.
T Consensus 254 ~l~~~-~-~~~~~~~~~~aa~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~~~~f~-~~~~~~------ 320 (370)
T PRK09105 254 KLARF-G-HNPLPVPAAAAGLASLRD--PKLVPQRRAENAAVREDTIAWLKKK-GYK-CTPSQANCF-MVDVKR------ 320 (370)
T ss_pred HHHhc-C-CCCcCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-cCCCCCcEE-EEeCCC------
Confidence 77665 2 345777788888888875 5788888999999999999999987 777 546776655 577652
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
+..++...|++ +||.+ +..|. .++|+|++++. +++++.+++.|++++
T Consensus 321 -~~~~l~~~L~~-~gI~v--~~~~~~~~~~~Ris~~~-~~~~~~l~~al~~~~ 368 (370)
T PRK09105 321 -PAKAVADAMAK-QGVFI--GRSWPIWPNWVRVTVGS-EEEMAAFRSAFAKVM 368 (370)
T ss_pred -CHHHHHHHHHH-CCcEE--ecCCCCCCCeEEEEcCC-HHHHHHHHHHHHHHh
Confidence 56788888865 59998 33343 36899999985 567788888877664
No 89
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-42 Score=325.15 Aligned_cols=327 Identities=20% Similarity=0.293 Sum_probs=260.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.+..++|+.|.| .+++++.+.+++.+.+.......|++. +..++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~----~~~~p~~~~~a~~~~~~~~~~~~y~~~-~~~~lr~~ia~~~------~~~~~~i~it~G~~~~l 89 (351)
T PRK14807 21 IPYKYKMDANET----PFELPEEVIKNIQEIVKSSQVNIYPDP-TAEKLREELARYC------SVVPTNIFVGNGSDEII 89 (351)
T ss_pred CCceeEccCCCC----CCCCCHHHHHHHHHHhhcCcccCCCCc-cHHHHHHHHHHHh------CCCcccEEEecCHHHHH
Confidence 345789999986 367788999999888765555678864 5789999999998 67889999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~ 199 (419)
..++.+++++||+|++++|+|..+...++..|.+++.++++ .++.+|++.+++++++ +++++++++|+||||.+++.
T Consensus 90 ~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~ 167 (351)
T PRK14807 90 HLIMLAFINKGDVVIYPHPSFAMYSVYSKIAGAVEIPVKLK--EDYTYDVGSFIKVIEKYQPKLVFLCNPNNPTGSVIER 167 (351)
T ss_pred HHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCeEEEeecC--CCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCH
Confidence 99999999999999999999999988889999999998875 3467999999998875 78999999999999999996
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++.+++ ++++.++|+||+|..+. +....++ ....+++++++||||.|++||+|+||++++. +++
T Consensus 168 ~~l~~l~---~~~~~~~ivDe~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~~~~GlRiG~~v~~~--------~~~ 232 (351)
T PRK14807 168 EDIIKII---EKSRGIVVVDEAYFEFY--GNTIVDV--INEFENLIVLRTLSKAFGLAGLRVGYAVANE--------NIL 232 (351)
T ss_pred HHHHHHH---HhCCCEEEEeCcchhhc--ccchHHH--hhhCCCEEEEecchHhcccchhceeeeecCH--------HHH
Confidence 6666655 45677899999998763 3222221 2334579999999999999999999999865 577
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .+..+.+.|.++.++++. .++++..+.++++++.+.+.|++++++. + .|.+|+|+|++++
T Consensus 233 ~~~~~~~~-~~~~~~~~q~~~~~~l~~---~~~~~~~~~~~~~r~~l~~~l~~~~g~~-~-~~~~~~~~~i~~~------ 300 (351)
T PRK14807 233 KYLNLVKS-PYNINSLSQVIALKVLRT---GVLKERVNYILNERERLIKELSKIPGIK-V-YPSKTNFILVKFK------ 300 (351)
T ss_pred HHHHHccC-CCCcCHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CcCCccEEEEEcC------
Confidence 87776544 355688899999999875 4677777788889999999998877876 5 4666889999886
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCC-CCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIY-VGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~-~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+..++...+ .++||.|.++.. ++..+++||+++. +++.+.+++.|+++
T Consensus 301 --~~~~~~~~l-~~~gV~v~~~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~ 349 (351)
T PRK14807 301 --DADYVYQGL-LERGILVRDFSKVEGLEGALRITVSS-CEANDYLINGLKEL 349 (351)
T ss_pred --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEcCC-HHHHHHHHHHHHHh
Confidence 355666555 567999988653 3457899999975 34556666666654
No 90
>PRK07908 hypothetical protein; Provisional
Probab=100.00 E-value=1.2e-41 Score=318.69 Aligned_cols=324 Identities=16% Similarity=0.201 Sum_probs=256.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+++++||+.|.+. +++++.+++++.+.+.. ...|+++.|..++|+++++++ ++++++|++|+|+++++
T Consensus 21 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~Y~~~~g~~~lr~aia~~~------~~~~~~I~it~Ga~~al 88 (349)
T PRK07908 21 GPGLLDFAVNVRH----DTPPEWLRERLAARLGD--LAAYPSTEDERRARAAVAARH------GRTPDEVLLLAGAAEGF 88 (349)
T ss_pred CCCeEEecCCCCC----CCCCHHHHHHHHHHhhH--hhcCCCccchHHHHHHHHHHh------CcChhhEEECCCHHHHH
Confidence 6789999999853 56788889999887753 357998889999999999998 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..+++ + .+ +.++++.|+|..+...++..|.++..++++.+ +.+|++.+ +++++++++++|+||||.++|.+
T Consensus 89 ~~~~~-l-~~-~~viv~~P~y~~~~~~~~~~G~~i~~v~~~~~--~~~d~~~l----~~~~~~i~l~np~NPTG~~~~~~ 159 (349)
T PRK07908 89 ALLAR-L-RP-RRAAVVHPSFTEPEAALRAAGIPVHRVVLDPP--FRLDPAAV----PDDADLVVIGNPTNPTSVLHPAE 159 (349)
T ss_pred HHHHh-c-CC-CeEEEeCCCChHHHHHHHHcCCEEEeeccCcc--cCcChhHh----ccCCCEEEEcCCCCCCCCCcCHH
Confidence 99998 4 56 56778899999999999999999999987643 67888754 34678999999999999999966
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
+ |.++|+ ++.++|+||+|+.+.. +. ..++... ..+++++++||||.|+++|+|+||++++. ++++
T Consensus 160 ~---l~~l~~-~~~~iIvDe~y~~~~~-~~-~~~l~~~-~~~~~i~i~S~SK~~~l~GlRiG~~~~~~--------~~~~ 224 (349)
T PRK07908 160 Q---LLALRR-PGRILVVDEAFADAVP-GE-PESLAGD-DLPGVLVLRSLTKTWSLAGLRVGYALGAP--------DVLA 224 (349)
T ss_pred H---HHHHHh-cCCEEEEECcchhhcc-CC-ccccccc-cCCCEEEEeecccccCCccceeeeeecCH--------HHHH
Confidence 5 455565 4788999999998753 32 3343332 23478999999999999999999999864 5777
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.... .+..+++.+.++..+++....+++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++.
T Consensus 225 ~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~~~p~~g~~~~~~~~~------ 295 (349)
T PRK07908 225 RLTRGRA-HWPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GAR-VVDPAAAPFVLVRVPD------ 295 (349)
T ss_pred HHHhcCC-CCCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcE-eccCCCceEEEEECCc------
Confidence 7776543 245667777777777764335678888999999999999999987 776 5477899999998862
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
..++ .++++++||.+.||..|+. ++++||+++ ++++++++++.|++++.
T Consensus 296 --~~~~-~~~l~~~gI~v~~g~~f~~~~~~~vRis~~-~~~~~~~l~~al~~~~~ 346 (349)
T PRK07908 296 --AELL-RKRLRERGIAVRRGDTFPGLDPDYLRLAVR-PRAEVPVLVQALAEILK 346 (349)
T ss_pred --HHHH-HHHHHhCCEEEEECCCCCCCCCCeEEEEeC-CCccHHHHHHHHHHHHh
Confidence 3344 4555888999999998853 689999996 45677777777777654
No 91
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-42 Score=302.08 Aligned_cols=329 Identities=22% Similarity=0.417 Sum_probs=278.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLP--YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQV 153 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~ 153 (419)
...|.+..|.+++|+++|+++.+..| +..+|+++++++|+|.+++.++..|++|||.-++|.|.|+++..-++ ..|+
T Consensus 114 la~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgv 193 (471)
T KOG0256|consen 114 LAMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGV 193 (471)
T ss_pred HhhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCcccccceeccCc
Confidence 34788999999999999999988554 55789999999999999999999999999999999999999865554 3488
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
+++++.+...+++++++++++.++.+ +.+.|+++||+||.|.+++++++..+++++.++|+.+|+||+|+...|
T Consensus 194 eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF 273 (471)
T KOG0256|consen 194 EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGSVF 273 (471)
T ss_pred eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccccc
Confidence 99999999889999999999987653 567899999999999999999999999999999999999999999999
Q ss_pred CCCCCCCccccC-----CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHH
Q 014769 228 GSIPYTPMGLFG-----SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQ 302 (419)
Q Consensus 228 ~~~~~~~~~~~~-----~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~ 302 (419)
+...+.++..+. ..+++-++.|+||-+|+||+|+|.+.+.++ +++.+.++... .+..++..|..++.
T Consensus 274 ~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne-------~VvsaA~kmss-f~~vSs~tQ~~la~ 345 (471)
T KOG0256|consen 274 DKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNE-------DVVSAATKMSS-FGLVSSQTQYLLAS 345 (471)
T ss_pred CccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecCh-------HHHHHHHHHhh-ccCCcHHHHHHHHH
Confidence 988777765432 334688999999999999999999999774 47776666655 46778999999999
Q ss_pred HHcccc--hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc-cCCCCHHHHHHHHHHhcCeEee
Q 014769 303 ILEKTK--EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL-EDINDDIEFALKLAKEESVIVT 379 (419)
Q Consensus 303 ~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~-~~~~~~~~~~~~ll~~~gv~v~ 379 (419)
+|.... ..++.++..|++.+..++.+.|+++ |+.|. ..++|+|+|+++..... .......++..+++.+-++.++
T Consensus 346 LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlS 423 (471)
T KOG0256|consen 346 LLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTSLTFEGELELWERILDNVKLNLS 423 (471)
T ss_pred HhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHHhhccccC
Confidence 998732 5788999999999999999999998 88865 88999999999864211 1112345778888887799999
Q ss_pred cCCCCCC--CCeEEEEeec-CHHHHHHHHHHHHHHHHHH
Q 014769 380 PGIYVGL--KNWLRIAFCA-EPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 380 ~g~~~~~--~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~ 415 (419)
||+.|.. ++|+|++|+. .++.++-+++||+.++...
T Consensus 424 pG~s~~C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~~~ 462 (471)
T KOG0256|consen 424 PGSSCHCHEPGWFRVCFANMSEETLEVAMRRLKQFLDSQ 462 (471)
T ss_pred CCCcceecCCCeEEEEeccCCHHHHHHHHHHHHHHHHhh
Confidence 9999865 7999999965 5566666999999998754
No 92
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1e-42 Score=325.51 Aligned_cols=321 Identities=20% Similarity=0.331 Sum_probs=257.6
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
...|+|+.+.+. +++++.+ .....+.|+++. ..++++++++++ ++++++|++|+|+++++.
T Consensus 28 ~~~~~l~~Nenp----~~~~~~~--------~~~~~~~Yp~~~-~~~l~~~~a~~~------g~~~~~I~~~~Gs~e~i~ 88 (351)
T PRK01688 28 NGDVWLNANEYP----TAVEFQL--------TQQTLNRYPECQ-PKAVIENYAAYA------GVKPEQVLVSRGADEGIE 88 (351)
T ss_pred CCceEecCCCCC----CCCChhh--------cccccccCCCCC-hHHHHHHHHHHh------CCCHHHEEEcCCHHHHHH
Confidence 346899988642 3344432 112356788753 579999999998 689999999999999999
Q ss_pred HHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 122 VILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 122 ~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
.++++++++| |+|+++.|+|..|...++..|.+++.+++++ ++.+|++.+++++ +++++++++|||||||.+++.+
T Consensus 89 ~~~~~~~~~g~~~vli~~P~y~~y~~~~~~~G~~~~~v~~~~--~~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~ 165 (351)
T PRK01688 89 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVEIRTVPTLD--NWQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQ 165 (351)
T ss_pred HHHHHhcCCCCCEEEEcCCCHHHHHHHHHHcCCEEEEeecCC--CCCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHH
Confidence 9999999887 9999999999999999999999999998753 5789999999887 4789999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|++.|++ +.++|+||+|.+|.... . ....+...+++++++||||.|+++|+|+||++++. ++++
T Consensus 166 ~l~~l~~~~~~-~~~vivDEay~~f~~~~-s--~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~i~~~--------~~i~ 233 (351)
T PRK01688 166 DLRTLLELTRG-KAIVVADEAYIEFCPQA-S--LAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANE--------EVIN 233 (351)
T ss_pred HHHHHHHhCCC-CcEEEEECchhhcCCCC-C--hHHHHhhCCCEEEEecchHhhcCHHHHHhHHhCCH--------HHHH
Confidence 99999999986 68899999999876321 1 11122344689999999999999999999999865 6778
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.... .+..+.+.+.++..+|+....+++++.++.++++++.+.+.|++++++..+ .|.+++|+|++++
T Consensus 234 ~l~~~~~-~~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~ps~~nfi~~~~~------- 304 (351)
T PRK01688 234 LLLKVIA-PYPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQV-FDSETNYILARFT------- 304 (351)
T ss_pred HHHhccC-CCCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC-------
Confidence 8876644 356777778888888875334678888888999999999999988776423 6788999999885
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCC-CCCCeEEEEeecCHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYV-GLKNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~-~~~~~~Ris~~~~~~~l~~~l~~l 408 (419)
+..++...|+ ++||.|.++..+ +.++|+||++++ +++++.+++.|
T Consensus 305 -~~~~l~~~L~-~~gi~vr~~~~~~~~~~~iRis~~~-~~e~~~l~~al 350 (351)
T PRK01688 305 -ASSAVFKSLW-DQGIILRDQNKQPGLSNCLRITIGT-REECQRVIDAL 350 (351)
T ss_pred -CHHHHHHHHH-HCCeEEEECCCcCCCCCeEEEeCCC-HHHHHHHHHhh
Confidence 3567777775 679999977654 557899999985 57888888776
No 93
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=100.00 E-value=3.1e-42 Score=322.94 Aligned_cols=327 Identities=23% Similarity=0.394 Sum_probs=269.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|||++|++. ++++|.+++++.++... ...|+++.+ .++|+++++++ ++++++|++|+|+++++
T Consensus 18 ~~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~~~~-~~lr~~ia~~~------~~~~~~i~~~~G~~~~l 84 (346)
T TIGR01141 18 GKEVIKLNSNENP----FGPPPKAKEALRAEADK--LHRYPDPDP-AELKQALADYY------GVDPEQILLGNGSDEII 84 (346)
T ss_pred CCceEEccCCCCC----CCCCHHHHHHHHHhHHH--hhcCCCCCH-HHHHHHHHHHh------CcChHHEEEcCCHHHHH
Confidence 4689999999863 56788899999887643 347887666 89999999998 46789999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++.+++++||+|++++|+|+.+...++..|.++..++++++ +.+|++.++++++++++++++++|+||||.++|.+
T Consensus 85 ~~~~~~l~~~gd~v~~~~p~y~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~ 162 (346)
T TIGR01141 85 ELLIRAFLEPGDAVLVPPPTYSMYEISAKIHGAEVVKVPLDED--GQLDLEDILVAIDDKPKLVFLCSPNNPTGNLLSRS 162 (346)
T ss_pred HHHHHHhcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEeccCCC--CCCCHHHHHHhcCCCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999888888999999999887543 67899999998887889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++.++++.|+ +++++|+|++|+.+...+... + .....+++++++|+||.++++|+|+||++++. ++++
T Consensus 163 ~~~~l~~~~~-~~~~ii~D~~y~~~~~~~~~~-~--~~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~ 230 (346)
T TIGR01141 163 DIEAVLERTP-EDALVVVDEAYGEFSGEPSTL-P--LLAEYPNLIVLRTLSKAFGLAGLRIGYAIANA--------EIID 230 (346)
T ss_pred HHHHHHHhCC-CCcEEEEECchhhhcCCccHH-H--HHhhCCCEEEEehhhHhhhchhhhceeeecCH--------HHHH
Confidence 8888888887 799999999999766432211 1 12223468999999999989999999999864 5777
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.... .++.+.++|.++..+++. ..++++.+++++++++.+.+.|++++++. + .|.+|+|+|+.++.
T Consensus 231 ~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~-~-~~~~g~~~~~~~~~------ 299 (346)
T TIGR01141 231 ALNKVRA-PFNLSRLAQAAAIAALRD--DDFIEKTVEEINAERERLYDGLKKLPGLE-V-YPSDANFVLIRFPR------ 299 (346)
T ss_pred HHHhccC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhcCCCE-E-CCCcCCEEEEecCC------
Confidence 7776543 356688899988888876 34788888999999999999999887877 4 45678899998863
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~l~~~l~~l 408 (419)
++.++...| .++||.+.||..|+. .+++|++++ ++++++++++.|
T Consensus 300 -~~~~~~~~L-~~~gI~v~~g~~f~~~~~~iRls~~-~~~~i~~~~~~l 345 (346)
T TIGR01141 300 -DADALFEAL-LEKGIIVRDLNSYPGLPNCLRITVG-TREENDRFLAAL 345 (346)
T ss_pred -CHHHHHHHH-HHCCeEEEeCCCcCCCCCeEEEecC-CHHHHHHHHHHh
Confidence 456777766 467999999998744 789999988 578899888876
No 94
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.3e-42 Score=322.60 Aligned_cols=304 Identities=20% Similarity=0.321 Sum_probs=246.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEE
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEV 155 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~ 155 (419)
...|+++ +..+||++|++++ ++++++|++|+|+++++..++++++.+| |.|++++|+|..+...++..|.++
T Consensus 53 ~~~Y~~~-~~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~~~~~~~g~~~ 125 (364)
T PRK04781 53 TRRYPDP-QPPGLRSALAALY------GCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYAVCARLQNAPL 125 (364)
T ss_pred hccCCCC-CHHHHHHHHHHHh------CcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEE
Confidence 3578875 4699999999998 5789999999999999999999999998 799999999998888889999999
Q ss_pred EEEeccC-CCCcccChHHHHHhh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769 156 RHFDLLP-ERNWEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 156 ~~~~~~~-~~~~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 233 (419)
+.++++. ++++.+|++++.+.+ .++++++++++|+||||.+++.+++.++++.|++ ++++|+||+|.+|.+...
T Consensus 126 ~~v~~~~~~~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~-~~~iI~Deay~~f~~~~~--- 201 (364)
T PRK04781 126 VEVPLVDGADGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQG-KALVVVDEAYGEFSDVPS--- 201 (364)
T ss_pred EEEecCCCccCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCC-CcEEEEeCcchhhcCCcc---
Confidence 9999753 345678888876544 5678999999999999999999999999998864 789999999999875321
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHH
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
.+...+..+++++++||||.|++||+|+||++++. ++++.++.... .++.+.+.|.++..+|+....++..
T Consensus 202 ~~~~~~~~~~vi~~~SfSK~~gl~GlRvGy~v~~~--------~l~~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~ 272 (364)
T PRK04781 202 AVGLLARYDNLAVLRTLSKAHALAAARIGSLIANA--------ELIAVLRRCQA-PYPVPTPCAALAEQALSAPALAVTA 272 (364)
T ss_pred hHHHHhhCCCEEEEecChhhcccccceeeeeeCCH--------HHHHHHHhccC-CCCCCHHHHHHHHHHHhcccHHHHH
Confidence 12223345689999999999999999999999865 68888887654 4567888888888888765445666
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEE
Q 014769 314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRI 392 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ri 392 (419)
+..+.++++++.+.+.|++++++..+ .|.+|+|+|++++ +..++...+ .++||.|.||..|. ..+|+||
T Consensus 273 ~~~~~~~~~r~~l~~~L~~~~~~~~~-~p~~g~f~~~~~~--------~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~Ri 342 (364)
T PRK04781 273 RRVAEVRAERERLHAALAQLPGVRRV-YPSQGNFLLVRFD--------DAEAAFQAL-LAAGVVVRDQRAAPRLSDALRI 342 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCeE-CCCCCcEEEEEcC--------CHHHHHHHH-HHCCeEEeeCCCCCCCCCeEEE
Confidence 67778899999999999988776424 6888999999986 345666555 67899999998653 4689999
Q ss_pred EeecCHHHHHHHHHHHHHH
Q 014769 393 AFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 393 s~~~~~~~l~~~l~~l~~~ 411 (419)
+++. +++.+.+++.|+++
T Consensus 343 s~~~-~~~~~~l~~al~~~ 360 (364)
T PRK04781 343 TLGT-PEQNDRVLAALQRT 360 (364)
T ss_pred eCCC-HHHHHHHHHHHHHH
Confidence 9986 35556666666543
No 95
>PRK03321 putative aminotransferase; Provisional
Probab=100.00 E-value=2.2e-41 Score=317.69 Aligned_cols=329 Identities=22% Similarity=0.294 Sum_probs=263.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
.++|+|+.|.+. +++++.+++++.+.+.. ...|++ .|..++|+++++++ ++++++|++|+|+++++.
T Consensus 22 ~~~i~l~~~~~~----~~~~~~~~~a~~~~~~~--~~~y~~-~g~~~lr~~ia~~~------~~~~~~I~~~~G~~~~l~ 88 (352)
T PRK03321 22 PGAIKLSSNETP----FGPLPSVRAAIARAAAG--VNRYPD-MGAVELRAALAEHL------GVPPEHVAVGCGSVALCQ 88 (352)
T ss_pred ccceeccCCCCC----CCCCHHHHHHHHHHHHh--cCcCCC-CcHHHHHHHHHHHh------CcCHHHEEECCCHHHHHH
Confidence 468999999864 45567899998877653 456864 79999999999998 578899999999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
.++..++++||+|+++.|+|..+...++..|.+++.+++++ ++.+|++.++++++++++++++++|+||||.++|.++
T Consensus 89 ~~~~~~~~~gd~Vli~~p~y~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~ 166 (352)
T PRK03321 89 QLVQATAGPGDEVIFAWRSFEAYPILVQVAGATPVQVPLTP--DHTHDLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAE 166 (352)
T ss_pred HHHHHhcCCCCEEEeCCCCHHHHHHHHHHcCCEEEEccCCC--CCCCCHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHH
Confidence 99999999999999999999988888889999999988753 3578999999999888899999999999999999888
Q ss_pred HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 281 (419)
+.++++.| ++++++|+||+|.++.+++....++..+...+++++++||||.|+++|+|+||++++. ++++.
T Consensus 167 l~~l~~~~-~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~--------~~~~~ 237 (352)
T PRK03321 167 LARFLDAV-PADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHP--------EVIAA 237 (352)
T ss_pred HHHHHHhC-CCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCCH--------HHHHH
Confidence 88887765 4699999999999988866433334344445689999999999999999999999864 57788
Q ss_pred HHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCC
Q 014769 282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN 361 (419)
Q Consensus 282 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~ 361 (419)
+.... ..++.+.++|.++..++.. .+.+.+..+++.++++.+.+.|++. ++. + .+.+|+|+|++++.
T Consensus 238 ~~~~~-~~~~~s~~~q~~a~~~l~~--~~~~~~~~~~~~~~r~~~~~~L~~~-~~~-~-~~~~g~~i~i~l~~------- 304 (352)
T PRK03321 238 LRKVA-VPFSVNSLAQAAAIASLAA--EDELLERVDAVVAERDRVRAALRAA-GWT-V-PPSQANFVWLPLGE------- 304 (352)
T ss_pred HHHhc-CCCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-CCCCCCEEEEeCCC-------
Confidence 77653 3467788999888888864 2344455555666778888888886 665 4 45568899998852
Q ss_pred CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
+..++...+ +++||.+.+ |+ ..++||+++ +.++.+++++.|++++.
T Consensus 305 ~~~~~~~~l-~~~gI~v~~---~~-~~~iRi~~~-~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 305 RTADFAAAA-AEAGVVVRP---FA-GEGVRVTIG-APEENDAFLRAARAWRA 350 (352)
T ss_pred CHHHHHHHH-HHCCEEEEc---cC-CCcEEEeeC-CHHHHHHHHHHHHHHhc
Confidence 456777776 678999987 33 456999985 45678888888887654
No 96
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=5.2e-41 Score=316.48 Aligned_cols=325 Identities=21% Similarity=0.349 Sum_probs=259.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE-cccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV-TLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-t~g~~~a 119 (419)
+.++|+|+.|++. ++++|.+.+++.+.+.. ...|+++. ..++|+++++++ ++++++|++ ++|++++
T Consensus 33 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~--~~~y~~~~-~~~lr~~ia~~~------~~~~~~i~~~~~Ga~~~ 99 (361)
T PRK00950 33 PESIIKLGSNENP----LGPSPKAVEAIEKELSK--IHRYPEPD-APELREALSKYT------GVPVENIIVGGDGMDEV 99 (361)
T ss_pred ccceEEccCCCCC----CCCCHHHHHHHHHHHHh--hcCCCCCC-HHHHHHHHHHHh------CCCHHHEEEeCCCHHHH
Confidence 4589999999753 45678888888877653 34688754 499999999998 678899999 7899999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++++++++||.|++++|+|+.+...++..|.+++.++. +.++.+|++.+++.++++++++++++|+||||.++|.
T Consensus 100 i~~~~~~~~~~gd~vlv~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 177 (361)
T PRK00950 100 IDTLMRTFIDPGDEVIIPTPTFSYYEISAKAHGAKPVYAKR--EEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPE 177 (361)
T ss_pred HHHHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEeec--CCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCH
Confidence 99999999999999999999999988888999999988874 3456899999999888788999999999999999995
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+ ++.++|+++|+++|+||+|.++. +....++ ....+++++++||||.++++|+|+||+++++ +++
T Consensus 178 ~---~l~~l~~~~~~~li~De~y~~~~--~~~~~~~--~~~~~~vi~~~S~SK~~g~~GlRiG~~~~~~--------~~~ 242 (361)
T PRK00950 178 E---DIRKILESTDALVFVDEAYVEFA--EYDYTPL--ALEYDNLIIGRTFSKVFGLAGLRIGYGFVPE--------WLI 242 (361)
T ss_pred H---HHHHHHHHCCcEEEEECchhhhC--ccchHHH--HHhcCCEEEEEeehHhhcCchhhcchhcCCH--------HHH
Confidence 5 55555668899999999998865 2222221 2233578999999999999999999999865 577
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .+..+.+.|.++..+++. .+++++..++++++++.+.+.|. +. + .|.+|+|+|++++.
T Consensus 243 ~~~~~~~~-~~~~~~~~~~~a~~~l~~--~~~~~~~~~~~~~~r~~l~~~l~----~~-~-~~~~~~~i~~~~~~----- 308 (361)
T PRK00950 243 DYYMRAKT-PFSLTRLSQAAAIAALSD--KEYIEKSIEHGIKSREYLYNELP----FK-V-YPSEANFVLVDVTP----- 308 (361)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHhhcC----ee-E-CCCcceEEEEECCC-----
Confidence 77776554 345678888888888875 56788888888888888877765 33 3 46678999998842
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
.+..+++..++ ++||.+.||..|+. ++++|++++ +.++++++++.|++++
T Consensus 309 -~~~~~~~~~l~-~~gv~v~~~~~f~~~~~~~lRis~~-~~~~~~~l~~~L~~il 360 (361)
T PRK00950 309 -MTAKEFCEELL-KRGVIVRDCTSFRGLGDYYIRVSIG-TFEENERFLEILKEIV 360 (361)
T ss_pred -CCHHHHHHHHH-HCCEEEeeCCccCCCCCCeEEEECC-CHHHHHHHHHHHHHHh
Confidence 25778888875 57999999988854 579999998 4568999999998875
No 97
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=6.7e-41 Score=296.92 Aligned_cols=393 Identities=20% Similarity=0.281 Sum_probs=297.9
Q ss_pred ccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHH---H---------------H
Q 014769 7 NKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAED---A---------------I 68 (419)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~---a---------------~ 68 (419)
++.+....-+...++...++.+.. +.+ +.+.++|.|+.|-|... .||......+ . +
T Consensus 6 ~dys~~ls~es~srk~~p~~~~~~-~~s----~~~i~~i~lagGlPnp~-~fp~~~~s~~p~~~~~~e~~~~~~~~~~~~ 79 (472)
T KOG0634|consen 6 KDYSHHLSKESASRKLSPLRALGD-IKS----ASPISIISLAGGLPNPD-YFPIRSDSIKPQGSWKKENGKKLNNVTFAF 79 (472)
T ss_pred ccHHHHhcccccccccChHHHhhh-Hhh----cCCCceEEecCCCCCCC-cccccccccccccCccccccccccceeeec
Confidence 444555554566777777777765 322 33556999999977643 2444332222 0 0
Q ss_pred HHHHhCC-----CCCCCCCCCCCHHHHHHHHHHHH-hhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCC
Q 014769 69 VDAVRSG-----KFNCYATNSGIPPARRAIADYLS-RDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP 142 (419)
Q Consensus 69 ~~~~~~~-----~~~~Y~~~~g~~~lr~~ia~~l~-~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~ 142 (419)
.+..+.. ...+|+++.|.++|...|.++.. ..+......-+|++|+|.+.+++.+++.++++||.|+++.++|.
T Consensus 80 ~~~~~~~~l~~s~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~ 159 (472)
T KOG0634|consen 80 ENEASENTLPLSRALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYP 159 (472)
T ss_pred cccCCcccchhhhhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccch
Confidence 0001110 12489999999999999999665 22333334459999999999999999999999999999999999
Q ss_pred CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--------CccEEEEeCC--CCccccCCCHHHHHHHHHHHHhC
Q 014769 143 YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--------NTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 143 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
+-....+..|+.++.++++. .++++|.|++.+.. ..+-|+.+-| +||||..++.+..++|.++|++|
T Consensus 160 ~AL~s~~a~gv~~ipv~md~---~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKy 236 (472)
T KOG0634|consen 160 SALQSMEALGVKIIPVKMDQ---DGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKY 236 (472)
T ss_pred HHHHhccccCceEEeccccC---CCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHc
Confidence 98888999998888777743 36899999887643 1134666666 89999999999999999999999
Q ss_pred CCeEEEcccccccccCC--------CC-----------CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769 213 RVMVVADEVYGHLTFGS--------IP-----------YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF 273 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~--------~~-----------~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 273 (419)
+++||+||+|..+.++. .+ .+++..++.+++||.+.||||. .+||+|+||+.+++
T Consensus 237 DfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKi-iaPGlRlG~it~~~----- 310 (472)
T KOG0634|consen 237 DFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKI-IAPGLRLGWITGNS----- 310 (472)
T ss_pred CEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhh-hcCcceeEEeecCH-----
Confidence 99999999999988872 11 2334566778899999999998 69999999999876
Q ss_pred chhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccch----HHHHHHHHHHHHHHHHHHHHhhc-CCCC-CCCCCCCceE
Q 014769 274 QKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKE----DFFCKLIDTLRESAEICYDGVKE-IPCI-SCPNKPEGSM 346 (419)
Q Consensus 274 ~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~-~~~~-~~~~~p~~g~ 346 (419)
.+++++-.... .+.+++...|..+.++|....+ +|+.+.+..|..+++.+..+|.+ +|.- ..+..|.+||
T Consensus 311 ---~~l~ril~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGm 387 (472)
T KOG0634|consen 311 ---LFLKRILDLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGM 387 (472)
T ss_pred ---HHHHHHhhhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCeeEEecCCcce
Confidence 35565555543 3566888999999999987654 67888888999999999999987 6754 3367999999
Q ss_pred EEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCC------C-CeEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 014769 347 VTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGL------K-NWLRIAFC-AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 347 ~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~-~~~Ris~~-~~~~~l~~~l~~l~~~~~~~ 415 (419)
|+|++++.... +......++...++.++||.+.+|..|.. . -++|++++ .+.|+++++++++..+++++
T Consensus 388 Fiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a~~e~l~~g~~rf~~~ike~ 467 (472)
T KOG0634|consen 388 FIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFAEPEKLDEGIERFGSVIKEH 467 (472)
T ss_pred EEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEeecCCHHHHHHHHHHHHHHHHHH
Confidence 99999972111 01122567777888999999999999964 2 38999995 68899999999999999988
Q ss_pred hc
Q 014769 416 TK 417 (419)
Q Consensus 416 ~~ 417 (419)
..
T Consensus 468 f~ 469 (472)
T KOG0634|consen 468 FI 469 (472)
T ss_pred hh
Confidence 64
No 98
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=3.7e-41 Score=315.69 Aligned_cols=321 Identities=17% Similarity=0.277 Sum_probs=251.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.+.|+|+.|.+. +++++.+ . .. ....|+++ +..+||+++|+++ ++++++|++|+|+++++
T Consensus 30 ~~~~~~l~~ne~~----~~~~~~~-----~-~~--~~~~Yp~~-~~~~Lr~aia~~~------~~~~~~I~it~Gs~~~i 90 (354)
T PRK04635 30 GRGDIWINANESP----FNNEYKL-----D-LA--RLNRYPEC-QPPELINAYSAYA------GVAPEQILTSRGADEAI 90 (354)
T ss_pred CCCcEEeeCCCCC----CCCChhh-----h-hH--HhccCCCC-CHHHHHHHHHHHh------CcCHHHEEEeCCHHHHH
Confidence 3567999999753 3333332 1 11 24579875 5899999999998 78999999999999999
Q ss_pred HHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
..++++++++| |+|++++|+|..|...++..|.+++.++++. ++.+|++.++. + ++++++++++||||||.+++.
T Consensus 91 ~~~~~~~~~~g~d~vlv~~P~y~~y~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~ 166 (354)
T PRK04635 91 ELLIRAFCEPGQDSIACFGPTYGMYAISAETFNVGVKALPLTA--DYQLPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDR 166 (354)
T ss_pred HHHHHHhcCCCCCeEEEcCCChHHHHHHHHHcCCEEEEEecCC--CCCCCHHHHHh-c-cCCCEEEEeCCCCCCCccCCH
Confidence 99999999998 9999999999999988999999999998753 46788888873 4 578999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|++.|+ ++++|+||+|..+.... ....+ ....+++++++||||.|+++|+|+||+++++ +++
T Consensus 167 ~~l~~l~~~~~--~~~vivDeay~~~~~~~-s~~~~--~~~~~~~iv~~S~SK~~~l~GlRlG~~i~~~--------~~~ 233 (354)
T PRK04635 167 ADIEQLIEMTP--DAIVVVDEAYIEFCPEY-SVADL--LASYPNLVVLRTLSKAFALAGARCGFTLANE--------ELI 233 (354)
T ss_pred HHHHHHHHhCC--CcEEEEeCchHhhccCc-chHHH--HhhCCCEEEEechHHHhhhhHHHHhhhhCCH--------HHH
Confidence 99999998876 49999999999876321 11111 2334678999999999999999999999865 577
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.+..... .++.+.+.|.++.+++.....+++++..+.++++++.+.+.|++++++. +.++ .|.|+|++++
T Consensus 234 ~~l~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~-~~~~-~g~f~~~~~~------ 304 (354)
T PRK04635 234 EILMRVIA-PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAK-VLEG-NGNYVLAKFD------ 304 (354)
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCce-ECCC-CCcEEEEECC------
Confidence 77765443 3556777888888888654345677778889999999999999886566 4344 5779999885
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
+..++.. ++.++||.+.++..++.++++|||++. +++++.+++.|++
T Consensus 305 --~~~~~~~-~l~~~gv~v~~~~~~~~~~~lRis~~~-~e~~~~l~~al~~ 351 (354)
T PRK04635 305 --DVDAVFK-ALWDAGIVARAYKDPRLANCIRFSFSN-RAETDKLIGLIRN 351 (354)
T ss_pred --CHHHHHH-HHHHCCEEEEECCCCCCCCeEEEEeCC-HHHHHHHHHHHHH
Confidence 3455654 457889999877655557899999974 6788888887754
No 99
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-40 Score=308.71 Aligned_cols=317 Identities=17% Similarity=0.251 Sum_probs=248.5
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.+.++|+|+.|++ .+++++.+++++.+.+.....+.|+++ |.++||+++++|+.+.+ +++++|++|+|++++
T Consensus 17 ~~~~~i~l~~~~~----~~~~p~~~~~~~~~~~~~~~~~~Y~~~-~~~~Lr~aia~~~~~~~---~~~~~i~it~Ga~~~ 88 (335)
T PRK14808 17 EKRDRTYLALNEN----PFPFPEDLVDEVFRRLNSDTLRIYYDS-PDEELIEKILSYLDTDF---LSKNNVSVGNGADEI 88 (335)
T ss_pred CCCceeEecCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCCC-ChHHHHHHHHHHhCCCC---CCcceEEEcCCHHHH
Confidence 3678999999985 467889999999887765545557764 89999999999996532 789999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..+++++ |.|++++|+|+.+...++..|.+++.++++++ +.++... +. .++++++++||||||.+++.
T Consensus 89 i~~~~~~~----d~v~v~~P~y~~~~~~~~~~g~~~~~v~~~~~--~~~~~~~----~~-~~~~i~i~nP~NPTG~~~s~ 157 (335)
T PRK14808 89 IYVMMLMF----DRSVFFPPTYSCYRIFAKAVGAKFLEVPLTKD--LRIPEVN----VG-EGDVVFIPNPNNPTGHVFER 157 (335)
T ss_pred HHHHHHHh----CcEEECCCCHHHHHHHHHHcCCeEEEecCCCc--CCCChhH----cc-CCCEEEEeCCCCCCCCCcCH
Confidence 99999988 77999999999999999999999999987543 3344222 22 46889999999999999998
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+ +++++||+||+|..+. +....+ .....+++++++||||.|+++|+|+||++++. +++
T Consensus 158 ~~l~~l~----~~~~~ii~DE~Y~~f~--~~~~~~--~~~~~~~vi~~~S~SK~~~l~GlRvG~~v~~~--------~~~ 221 (335)
T PRK14808 158 EEIERIL----KTGAFVALDEAYYEFH--GESYVD--LLKKYENLAVIRTFSKAFSLAAQRIGYVVSSE--------KFI 221 (335)
T ss_pred HHHHHHH----hcCCEEEEECchhhhc--CCchHH--HHHhCCCEEEEEechhhccCcccceEEEEeCH--------HHH
Confidence 8888776 4799999999999874 222222 12233579999999999999999999999975 588
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.+..... .++.+.++|.++..+++. .++..+..+.++++++.+.+.|+++ ++. +..| .|.|+|++++.
T Consensus 222 ~~l~~~~~-~~~~~~~~q~a~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~g~f~~~~l~~----- 290 (335)
T PRK14808 222 DAYNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-ITDS-RGNFVFIFMEK----- 290 (335)
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-ECCC-CCeEEEEeCCC-----
Confidence 88876553 356788889998888874 4567777788888899999999987 676 4355 56688998873
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.+..++...+ .++||.|.. | .+++||+++.. ++.+++++.|+.
T Consensus 291 -~~~~~~~~~l-~~~Gi~V~~---~--~~~~Risi~~~-~~~~~~~~~l~~ 333 (335)
T PRK14808 291 -EEKERLLEHL-RAKNIAVRS---F--REGVRITIGKR-EENDMILKELEV 333 (335)
T ss_pred -ccHHHHHHHH-HHCCeEEEE---C--CCCeEEecCCH-HHHHHHHHHHHh
Confidence 1345565554 678999985 2 47899999774 566777777764
No 100
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=100.00 E-value=1.3e-40 Score=309.13 Aligned_cols=295 Identities=17% Similarity=0.198 Sum_probs=232.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEE
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVR 156 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~ 156 (419)
...|+++ -..+||+++++++ ++++++|++|+|+++++..++.. .++| .|++++|+|+.|...++..|.+++
T Consensus 34 ~~~Yp~~-~~~~lr~~ia~~~------~~~~~~I~it~Gs~~~l~~~~~~-~~~~-~vv~~~P~y~~y~~~~~~~G~~v~ 104 (332)
T PRK06425 34 ISIYPEI-SYTDIEDQIKIYT------QGLKIKVLIGPGLTHFIYRLLSY-INVG-NIIIVEPNFNEYKGYAFTHGIRIS 104 (332)
T ss_pred cccCcCc-CHHHHHHHHHHHh------CCCcceEEECCCHHHHHHHHHHH-hCCC-cEEEeCCChHHHHHHHHHcCCeEE
Confidence 3578764 4789999999998 67899999999999999999974 5675 577779999999999999999999
Q ss_pred EEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769 157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (419)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 236 (419)
.++++. +..+.+.++. .+++++++++||||||.+++.+++++|+++|+++++++|+||+|.++.+++. .....
T Consensus 105 ~vp~~~---~~~~~~~l~~---~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~-~~~~~ 177 (332)
T PRK06425 105 ALPFNL---INNNPEILNN---YNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRA-EEDVL 177 (332)
T ss_pred EEeCCc---ccCcHHHHhh---cCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccc-hhHHH
Confidence 999853 3456555543 3788999999999999999999999999999999999999999999887542 11122
Q ss_pred ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc-hHHHHHH
Q 014769 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK-EDFFCKL 315 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~ 315 (419)
.....+++|+++||||.|++||+|+||+++++ ++++.+..... .+..+..++.+ +.... ..++++.
T Consensus 178 ~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~--------~li~~l~~~~~-~~~~~~~~~~~----l~~~~~~~~~~~~ 244 (332)
T PRK06425 178 LNRSYGNVIIGRSLTKILGIPSLRIGYIATDD--------YNMKISRKITE-PWSVCDPAIDF----IRSIDLDYVAKHS 244 (332)
T ss_pred HhccCCCEEEEeecHHhcCCchhhheeeecCH--------HHHHHHHHcCC-CCccCHHHHHH----HHHhhhHHHHHHH
Confidence 22334689999999999999999999999975 67787776543 23334333322 22222 3456778
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEE
Q 014769 316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIA 393 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris 393 (419)
++.++++++.+.+.|+++ ++. +..|.+|+|+|++++ ++.++...+++ +||.+.||..|+. ++|+||+
T Consensus 245 ~~~~~~~r~~l~~~L~~~-g~~-~~~~~~g~f~~~~~~--------~~~~~~~~l~~-~gi~v~~~~~f~~~~~~~iRis 313 (332)
T PRK06425 245 LDIMENERSYLINNLEAM-GFR-AAGDPSANFITFMIP--------DAHDFYSYLLK-NGILVRLLDDYECLGEQYIRIA 313 (332)
T ss_pred HHHHHHHHHHHHHHHHHC-CCE-ECCCCCceEEEEEcC--------CHHHHHHHHHH-CCeEEEECCCCCCCCCCEEEEE
Confidence 899999999999999988 676 334567889999875 36778777755 6999999998854 4799999
Q ss_pred eecCHHHHHHHHHHHHHHH
Q 014769 394 FCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 394 ~~~~~~~l~~~l~~l~~~~ 412 (419)
++.. ++.+.+++.|++++
T Consensus 314 ~~~~-~~~~~l~~al~~~~ 331 (332)
T PRK06425 314 IRRR-SFNIKLVNALRNFL 331 (332)
T ss_pred eCCH-HHHHHHHHHHHHHh
Confidence 9864 57788888887664
No 101
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=100.00 E-value=4.2e-40 Score=306.06 Aligned_cols=318 Identities=20% Similarity=0.295 Sum_probs=248.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|.+. +++++.+.+++.+++.......|++ .|.+++|+++++++ ++++++|++|+|+++++
T Consensus 17 ~~~~i~l~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Y~~-~g~~~lr~~ia~~~------~~~~~~I~~t~G~~~~l 85 (337)
T PRK03967 17 GNYRIWLDKNENP----FDLPEELKEEIFEELKRVPFNRYPH-ITSDPLREAIAEFY------GLDAENIAVGNGSDELI 85 (337)
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHhhcCccccCCC-CCHHHHHHHHHHHh------CcCcceEEEcCCHHHHH
Confidence 4578999999853 5677889999988876544567875 69999999999999 57899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++..+ +||+|+++.|+|..+...++..|.+++.++++. ++.+|++.+++.+ ++++++++++|+||||.+++.+
T Consensus 86 ~~~~~~~--~gd~V~v~~P~y~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~ 160 (337)
T PRK03967 86 SYLVKLF--EGKHIVITPPTFGMYSFYAKLNGIPVIDVPLKE--DFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEE 160 (337)
T ss_pred HHHHHHh--CCCeEEEeCCChHHHHHHHHHcCCeEEEeecCC--CCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHH
Confidence 9988877 799999999999988888899999999998753 4689999998765 4678899999999999999976
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++.++ + ++++++|+||+|..+.. ....+ .....+++++++||||.|+++|+|+||+++++ ++++
T Consensus 161 ~l~~i---~-~~~~~ii~De~y~~~~~--~~~~~--~~~~~~~vi~l~S~SK~~~l~GlRiG~iv~~~--------~~i~ 224 (337)
T PRK03967 161 EILKV---L-ETGKPVVLDEAYAEFSG--KSLIG--LIDEYPNLILLRTFSKAFGLAGIRAGYAIANE--------EIID 224 (337)
T ss_pred HHHHH---H-hcCCEEEEECchhhhcc--cchHH--HHhhCCCEEEEecchHhhcchhhhheeeecCH--------HHHH
Confidence 66555 4 36999999999998752 22211 12334579999999999999999999999864 6788
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.+..... .++.+.++|.++..+++. .++..+..+.+.++++.+.+.|.+. . .|.+++|+|++++
T Consensus 225 ~~~~~~~-~~~~~~~~q~~~~~~l~~--~~~~~~~~~~~~~~r~~l~~~L~~~-----~-~~~~~~~~~~~~~------- 288 (337)
T PRK03967 225 ALYRIKP-PFSLNILTMKIVRLALDH--YDLIEERIDYIIKERERVRRELGEY-----A-YPSDANFLLLKLD------- 288 (337)
T ss_pred HHHhhcC-CCCCCHHHHHHHHHHHhC--HHHHHHHHHHHHHHHHHHHHHhccC-----c-CCCCCcEEEEhHH-------
Confidence 8877654 356788999999999875 4566666667777788888887653 2 5788999998652
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+...| .++||.|.++.. ...+++||+++. +++.+++++.|.++...
T Consensus 289 -----~~~~l-~~~gi~v~~~~~-~~~~~~Ri~~~~-~~~~~~l~~~l~~~~~~ 334 (337)
T PRK03967 289 -----AYDYL-LENGIVVRKLSG-RLEGHIRVTVGK-REENDEFIKALKEIKEG 334 (337)
T ss_pred -----HHHHH-HHCCEEEEeCCC-CCCCeEEEecCC-HHHHHHHHHHHHHHHHh
Confidence 44555 457999987653 346799999975 34445555555555443
No 102
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=100.00 E-value=1.3e-39 Score=301.94 Aligned_cols=308 Identities=17% Similarity=0.178 Sum_probs=236.5
Q ss_pred CCeeeccCC-CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 42 RPVVPLGYG-DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 42 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.++|+|+.| +|. .++++.+.+ ..+ ..|+. +..+||++|++++ .+++|++|+|+++++
T Consensus 20 ~~~i~l~~ne~p~----~~~~~~~~~---~~~-----~~yp~--~~~~Lr~~ia~~~--------~~~~I~it~Gs~~al 77 (330)
T PRK05664 20 ADWLDLSTGIAPW----PWPVPAIPA---DAW-----ARLPE--TDDGLEAAARAYY--------GAPQLLPVAGSQAAI 77 (330)
T ss_pred HHheeecCCcCCC----CCCCcccCH---HHH-----HhCCC--ChHHHHHHHHHHh--------CCCCEEECcCHHHHH
Confidence 457999999 432 111122211 122 24765 3489999999998 247999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++. +.+||+|++++|+|+.+...++..|.+++.++++ .++.+++ +++++++++||||||.+++.+
T Consensus 78 ~~~~~--~~~gd~v~v~~P~y~~~~~~~~~~g~~~~~v~~~----------~~~~~~~-~~~~v~l~nP~NPTG~~~s~~ 144 (330)
T PRK05664 78 QALPR--LRAPGRVGVLSPCYAEHAHAWRRAGHQVRELDEA----------EVEAALD-SLDVLVVVNPNNPTGRRFDPA 144 (330)
T ss_pred HHHHH--ccCCCEEEEcCCChHHHHHHHHHcCCeEEEechh----------hHhhhhc-CCCEEEEeCCcCCCCCccCHH
Confidence 98864 4799999999999999999999999999888642 3444453 677899999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|+++|++++++||+||+|..+. +..++..+...+++++++||||.|++||+|+||++++. ++++
T Consensus 145 ~l~~l~~~~~~~~~~iI~DE~y~~~~----~~~s~~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~~--------~l~~ 212 (330)
T PRK05664 145 RLLAWHARLAARGGWLVVDEAFMDNT----PQHSLAACAHRPGLIVLRSFGKFFGLAGARLGFVLAEP--------ALLR 212 (330)
T ss_pred HHHHHHHHHHhcCCEEEEECCcccCC----CcccccccccCCCEEEEeeccccccCCCcceEEEEeCH--------HHHH
Confidence 99999999999999999999998653 11234444455689999999999999999999999865 5778
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.+..... .+..+.+.|.++..+|+. ..+.++.+++++++++.+.+.|+++ ++. . .+..++|+|++++
T Consensus 213 ~~~~~~~-~~~~~~~~~~~~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-~~~-~-~~~~~~f~~~~~~------- 279 (330)
T PRK05664 213 ALAELLG-PWTVSGPTRWLAQAALAD--TPWQRRQRERLLAASQRLAALLRRH-GLT-P-AGGCALFQWVRTE------- 279 (330)
T ss_pred HHHHhcC-CCCCCHHHHHHHHHHHhC--hHHHHHHHHHHHHHHHHHHHHHHHC-CCc-c-cCCcceEEEEecC-------
Confidence 7776543 346678889999999875 3567778899999999999999987 553 2 2333478888764
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
++.++...+ .++||.|.+ |+..+++||+++.++++.+++++.|+++.++
T Consensus 280 -~~~~~~~~l-~~~gi~v~~---f~~~~~iRis~~~~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 280 -DAAALHEFL-ARRGILTRL---FEQPASLRFGLPADEADWARLDQALLAYRKE 328 (330)
T ss_pred -CHHHHHHHH-HHCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHhh
Confidence 456676665 677999974 4556899999986666777777777665543
No 103
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=100.00 E-value=8.5e-40 Score=303.33 Aligned_cols=312 Identities=18% Similarity=0.228 Sum_probs=250.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.++++++|+.|.+.. +++ ..+... ..+..|+++.+ +++|+.+++++ ++++++|++|+|++++
T Consensus 15 ~~~~~~~~~~~~~~~----~~~--~~~~~~-----~~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~G~~~~ 76 (330)
T TIGR01140 15 PPEDWLDFSTGINPL----GPP--VPPIPA-----SAWARYPDPEY-DELRAAAAAYY------GLPAASVLPVNGAQEA 76 (330)
T ss_pred ChhheeEccccCCCC----CCC--hhhcch-----HHHhhCCCccH-HHHHHHHHHHh------CCChhhEEECCCHHHH
Confidence 467899999997542 222 112111 12457888765 99999999998 5678999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..+..++ .+| .|++++|+|..+...++..|.++..++ |++.+++.++ +++++++++|+||||.+++.
T Consensus 77 i~~~~~~l-~~g-~vl~~~p~y~~~~~~~~~~g~~~~~~~---------d~~~l~~~~~-~~~~v~i~~p~NPtG~~~~~ 144 (330)
T TIGR01140 77 IYLLPRLL-APG-RVLVLAPTYSEYARAWRAAGHEVVELP---------DLDRLPAALE-ELDVLVLCNPNNPTGRLIPP 144 (330)
T ss_pred HHHHHHHh-CCC-eEEEeCCCcHHHHHHHHHcCCEEEEeC---------CHHHHHhhcc-cCCEEEEeCCCCCCCCCCCH
Confidence 99987775 567 799999999999999999999888765 7788888884 57789999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++|+++|+||+|..+.+.. ++... +..+++++++||||.++++|+|+||+++++ ++
T Consensus 145 ~~~~~l~~~a~~~~~~ii~De~y~~~~~~~----~~~~~~~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~--------~~ 212 (330)
T TIGR01140 145 ETLLALAARLRARGGWLVVDEAFIDFTPDA----SLAPQAARFPGLVVLRSLTKFFGLAGLRLGFVVAHP--------AL 212 (330)
T ss_pred HHHHHHHHHhHhcCCEEEEECcccccCCcc----chhhHhccCCCEEEEEecchhhcCchhhhhheeCCH--------HH
Confidence 999999999999999999999999876531 22222 234678999999999999999999999865 57
Q ss_pred HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
++.+..... .++.+.++|.++..+++. .++.+..+++++++++.+.+.|++++.+. + .|.+|+|+|++++
T Consensus 213 ~~~l~~~~~-~~~~s~~~q~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~~~f~~~~~~----- 282 (330)
T TIGR01140 213 LARLREALG-PWTVNGPARAAGRAALAD--TAWQAATRARLAAERARLAALLARLGGLE-V-VGGTALFLLVRTP----- 282 (330)
T ss_pred HHHHHhcCC-CCCchHHHHHHHHHHHhc--hHHHHHHHHHHHHHHHHHHHHHHhCCCce-E-CCCCCeEEEEEcC-----
Confidence 777776654 356788899999999975 46677888999999999999999985555 4 5668899999876
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l 408 (419)
+..+++++|+ ++||.+.||..|.. .+++|+++++..++ +.+++.|
T Consensus 283 ---~~~~l~~~l~-~~gi~v~pg~~f~~~~~~~iRi~~~~~~~~-~~~~~~l 329 (330)
T TIGR01140 283 ---DAAALHEALA-RRGILIRDFDNFPGLDPRYLRFALPTDEEN-DRLEEAL 329 (330)
T ss_pred ---CHHHHHHHHH-HCCEEEEECCCCCCCCCCEEEEEecCHHHH-HHHHHhh
Confidence 3567887775 57999999999852 57999999876655 7776665
No 104
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=100.00 E-value=1.9e-39 Score=301.24 Aligned_cols=310 Identities=12% Similarity=0.150 Sum_probs=241.8
Q ss_pred CCeeeccCCCCCCCCCCCCh-HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTA-VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQA 119 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~-~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~a 119 (419)
.++|+|+.+... ++++ +.+.. .. ...|+++. .+||+++++++ ++. +++|++|+|++++
T Consensus 24 ~~~i~ls~Nenp----~~~~~~~~~~---~~-----~~~Yp~~~--~~L~~~ia~~~------~~~~~~~I~i~~Gs~e~ 83 (339)
T PRK06959 24 DAWLDLSTGINP----HGYPVPPVPA---DA-----WRRLPEDD--DGLAACAARYY------GAPDAAHVLPVAGSQAA 83 (339)
T ss_pred hhhceeccCCCC----CCCCCCCCCH---HH-----HHhCCCch--HHHHHHHHHHh------CCCCcccEEECcCHHHH
Confidence 467999999632 1222 11111 11 23588753 89999999998 554 5899999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..+.. ++++|| |++++|+|+.|...++..|.+++.++.+. +.+ .+..+.+++++||||||.+++.
T Consensus 84 i~~l~~-~~~~g~-v~v~~P~y~~y~~~~~~~g~~~~~v~~~~--------~~~----~~~~~~v~l~nPnNPTG~~~s~ 149 (339)
T PRK06959 84 IRALPA-LLPRGR-VGIAPLAYSEYAPAFARHGHRVVPLDEAA--------DTL----PAALTHLIVVNPNNPTAERLPA 149 (339)
T ss_pred HHHHHH-hcCCCe-EEEcCCCcHHHHHHHHHCCCEEEeecccc--------hhc----cccCCEEEEeCCCCCCCCCCCH
Confidence 997765 457776 88999999999999999999988876532 222 2245689999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|++.|.+++.++|+||+|.++.+. .++..+...+++++++||||.|++||+|+||++++. +++
T Consensus 150 ~~l~~l~~~~~~~~~~vI~DEay~~~~~~----~s~~~~~~~~~vi~l~SfSK~~gl~GlRiGy~v~~~--------~li 217 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFADTLPA----ASLAAHTDRPGLVVLRSVGKFFGLAGVRAGFVLAAP--------ALL 217 (339)
T ss_pred HHHHHHHHHHHHcCCEEEEECCCccCCCc----ccchhccCCCCEEEEecChhhcCCcchheEEEecCH--------HHH
Confidence 99999999999999999999999987642 223333234579999999999999999999999865 688
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .+..+.++|.++.++|+. .++.++.++.++++++.+.+.|+++ ++. + . .+++|+|++++
T Consensus 218 ~~l~~~~~-~~~vs~~~q~a~~~~L~~--~~~~~~~~~~~~~~r~~l~~~L~~~-g~~-~-~-~~~~f~~~~~~------ 284 (339)
T PRK06959 218 AALRDALG-AWTVSGPARHAVRAAFAD--AAWQAAMRERLAADGARLAALLRAH-GFA-V-H-ATPLFSWTDDP------ 284 (339)
T ss_pred HHHHHhcC-CCCCcHHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHC-CCC-c-c-CcceEEEEeCC------
Confidence 88887654 456788999999999975 5778888999999999999999988 776 3 2 35789999875
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+..++...| .++||.|.. |+..+++||+++.++++.+.+++.|+++++.++
T Consensus 285 --~~~~l~~~l-~~~GI~vr~---~~~~~~lRisi~~~~~e~~~l~~al~~~~~~~~ 335 (339)
T PRK06959 285 --RAAALHAAL-ARRGIWTRY---FAPPPSVRFGLPADEAEWQRLEDALAECVPTLA 335 (339)
T ss_pred --CHHHHHHHH-HhCCeEEEE---CCCCCeEEEECCCCHHHHHHHHHHHHHHHHHHh
Confidence 355676666 567999974 445679999997667788999999988777654
No 105
>PRK08354 putative aminotransferase; Provisional
Probab=100.00 E-value=1.9e-38 Score=291.84 Aligned_cols=301 Identities=15% Similarity=0.237 Sum_probs=224.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
..++|+|+.|.+ | ++ ++.+.+++.++++. ...|+. ...+|+++++++ + ++|++|+|+++++
T Consensus 7 ~~~~i~l~~~~n---p-~~-p~~~~~a~~~~~~~--~~~yp~---~~~l~~~ia~~~------~---~~I~vt~G~~~al 67 (311)
T PRK08354 7 EEGLIDFSASVN---P-YP-PEWLDEMFERAKEI--SGRYTY---YEWLEEEFSKLF------G---EPIVITAGITEAL 67 (311)
T ss_pred ccceeEecCCCC---C-CC-CHHHHHHHHHHHHH--hhcCCC---hHHHHHHHHHHH------C---CCEEECCCHHHHH
Confidence 456899999953 2 23 47888888877653 346764 467999999987 2 4799999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++..+. +||+|++++|+|+.+...++..|.++..++ +|++.+++.++ +++.+++++|+||||.+++.+
T Consensus 68 ~~~~~~~~-~gd~vlv~~P~y~~~~~~~~~~g~~~~~~~--------~d~~~l~~~~~-~~~~vi~~~P~NPTG~~~~~~ 137 (311)
T PRK08354 68 YLIGILAL-RDRKVIIPRHTYGEYERVARFFAARIIKGP--------NDPEKLEELVE-RNSVVFFCNPNNPDGKFYNFK 137 (311)
T ss_pred HHHHHhhC-CCCeEEEeCCCcHHHHHHHHHcCCEEeecC--------CCHHHHHHhhc-CCCEEEEecCCCCCCCccCHH
Confidence 98886554 899999999999999999999999886542 57888888776 567899999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
++++|+++|+++|+++|+||+|.++.+++... ..+++++++||||.|++||+|+||+++ +.+
T Consensus 138 ~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~-------~~~~vi~~~S~SK~~~l~GlRiG~~v~-----------~~~ 199 (311)
T PRK08354 138 ELKPLLDAVEDRNALLILDEAFIDFVKKPESP-------EGENIIKLRTFTKSYGLPGIRVGYVKG-----------FEE 199 (311)
T ss_pred HHHHHHHHhhhcCcEEEEeCcchhcccccccc-------CCCcEEEEeccHhhcCCccceeeeeee-----------hHH
Confidence 99999999999999999999999988764211 145799999999999999999999997 234
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.++.... .+..+...+.++..+++. ..+++.+.++.+++.++.+.+.+ ...|+++++ |++++
T Consensus 200 ~l~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~l--------~~~~~~~~~-~~~~~------- 261 (311)
T PRK08354 200 AFRSVRM-PWSIGSTGYAFLEFLIED-DFEHLRKTMPLIWREKERFEKAL--------YVKSDANFF-IKDVG------- 261 (311)
T ss_pred HHHHcCC-CccCCHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHHHHhc--------CCCCCCcEE-EEECC-------
Confidence 4444332 344556666666666653 22444455555555444443322 124555544 46553
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC--HHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE--PSALKDGLGRM 408 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~--~~~l~~~l~~l 408 (419)
++.+++..+ .++||.|.||..|+.++|+||+++.+ .+.+..+++.+
T Consensus 262 -~~~~~~~~l-~~~gv~v~~g~~f~~~~~iRi~~~~~~~~~~l~~al~~~ 309 (311)
T PRK08354 262 -DAEKFVEFL-KRNGILVRDCTSFGLPGYIRFSVRDREENEKLIRALREW 309 (311)
T ss_pred -CHHHHHHHH-HHCCeEEEecccCCCCCeEEEEeCCHHHHHHHHHHHHHh
Confidence 456777766 66799999999998789999999753 34555555443
No 106
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=100.00 E-value=3.5e-36 Score=282.91 Aligned_cols=346 Identities=29% Similarity=0.500 Sum_probs=276.6
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHH
Q 014769 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL 124 (419)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~ 124 (419)
|||+.|++. +..++.++.++...-.......|.++.|..++++.+++++...++....++++++++|+++++..++
T Consensus 1 ~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~ 76 (350)
T cd00609 1 IDLSIGEPD----FPPPPEVLEALAAAALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLL 76 (350)
T ss_pred CCCCCCCCC----CCCCHHHHHHHHHHhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHH
Confidence 578888753 3455555555544222223457888899999999999999987776677889999999999999999
Q ss_pred HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769 125 SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 125 ~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
.++..+||+|+++.|+|.++...++..|..++.++.+.......+.+.++....++++++++++|+||||.++|.+++++
T Consensus 77 ~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~ 156 (350)
T cd00609 77 RALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEE 156 (350)
T ss_pred HHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHH
Confidence 99999999999999999999999999999999998865443333335666666778899999999999999999999999
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~ 284 (419)
|+++|+++|+++|+|++|+.+.+.+.....+...+..+.+++++|++|.++.+|+++|+++++++ ++.+.++.
T Consensus 157 l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~-------~~~~~~~~ 229 (350)
T cd00609 157 LAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPE-------ELLERLKK 229 (350)
T ss_pred HHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHH-------HHHHHHHH
Confidence 99999999999999999998877654432222334445679999999998879999999998652 36677766
Q ss_pred hhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCH
Q 014769 285 CLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD 363 (419)
Q Consensus 285 ~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~ 363 (419)
... .+++++...+.++..+++... ++.++.+++++++++.+.+.|++++... +..+.+|+++|++++.. ..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~g~~~~~~~~~~------~~ 301 (350)
T cd00609 230 LLPYTTSGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLV-VVKPSGGFFLWLDLPEG------DD 301 (350)
T ss_pred HHHhcccCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCcc-ccCCCccEEEEEecCCC------Ch
Confidence 543 246778888888888888643 6788888999999999999999874443 24678899999988642 24
Q ss_pred HHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHHHHHHHH
Q 014769 364 IEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 364 ~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
.+.+.+++.++||.+.++..|. .+.++|++++...++++.++++|+
T Consensus 302 ~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~~~~i~~~~~al~ 349 (350)
T cd00609 302 EEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATPEEELEEALERLA 349 (350)
T ss_pred HHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCCHHHHHHHHHHhh
Confidence 5666777788999999998876 578999999755999999999886
No 107
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.2e-36 Score=255.50 Aligned_cols=370 Identities=22% Similarity=0.370 Sum_probs=274.6
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHHHHHHHHH
Q 014769 20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPPARRAIAD 95 (419)
Q Consensus 20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~lr~~ia~ 95 (419)
-.-++|.++|.++-.-++ .+..|.|+-|+|...| ......++...+.+.++ ...+|..++|...|.++++.
T Consensus 11 t~~sGi~~lMdDl~d~Lr---t~g~imLggGNPa~iP--em~~~f~~~~aemla~~~~~e~~cnY~~pQG~~~li~ala~ 85 (417)
T COG3977 11 TRHSGITQLMDDLNDGLR---TPGAIMLGGGNPARIP--EMDDYFQDLLAEMLASGKATEALCNYDGPQGKAVLIDALAK 85 (417)
T ss_pred hhhhhHHHHHHHHHhhcc---CCCceeeCCCCcccCh--hHHHHHHHHHHHHHhcchHHHHHhcCCCCcchhHHHHHHHH
Confidence 346789999999887664 4459999999987643 23445555555555544 24589999999999999999
Q ss_pred HHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC---CC--CeEEee-CCCCCCcHHHHhhcCCEEEE---EeccCCCC-
Q 014769 96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR---PG--ANVLLP-RPGWPYYEGIAQRKQVEVRH---FDLLPERN- 165 (419)
Q Consensus 96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~---~g--d~vlv~-~p~~~~~~~~~~~~g~~~~~---~~~~~~~~- 165 (419)
++++.+|..+++++|.+|+|++.+++-++..+.. .| ..|+.| .|.|.+|..+...-..=+.+ +.+.+.+.
T Consensus 86 ~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~~l~~d~fVs~kP~iel~~~g~F 165 (417)
T COG3977 86 MLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADAGLEEDLFVSAKPNIELLPAGQF 165 (417)
T ss_pred HHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhccccccccCccceeeccCCcccccccce
Confidence 9999999999999999999999999999998864 23 456666 89999986543211111111 11222222
Q ss_pred -cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc----ccCC
Q 014769 166 -WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG----LFGS 240 (419)
Q Consensus 166 -~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~----~~~~ 240 (419)
+.+|.+.+. +.+.+.+++++.|.||||.+++.+++.+|.+++++||+.+++|.+|+. +++.+- ..--
T Consensus 166 KY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~------PFP~iifsd~~~~w 237 (417)
T COG3977 166 KYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGV------PFPGIIFSDATPLW 237 (417)
T ss_pred eeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCC------CCCceecccccccC
Confidence 456777664 345788899999999999999999999999999999999999999974 222221 1122
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHH--HHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCK--LID 317 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~--~~~ 317 (419)
.++++.|.|+||. |+||.|+|.+++.. ++++.+..... .+..+....++.++.+++.+.-..+.+ .+-
T Consensus 238 ~~NiilC~SLSK~-GLPG~R~GIiIane--------~viqaitnmn~iisLap~~~G~Aia~~mie~gdl~rlseqVIrP 308 (417)
T COG3977 238 NENIILCMSLSKL-GLPGSRCGIIIANE--------KVIQAITNMNGIISLAPGRMGPAIAAEMIESGDLLRLSEQVIRP 308 (417)
T ss_pred CCCEEEEeehhhc-CCCCcceeEEEccH--------HHHHHHHhccceeeecCCCccHHHHHHHhhcchHHHHHHHhhhH
Confidence 3579999999998 99999999999865 68888887753 356777888888889998865322222 223
Q ss_pred HHHHHHHHHHHHhhc-CCCCCC-CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---------
Q 014769 318 TLRESAEICYDGVKE-IPCISC-PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------- 386 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~-~~~~~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------- 386 (419)
-|+++.+...+.|+. +|...| .+.|+|+.|+|+-+.+..+ +.+++..+| +..||+++||+.|..
T Consensus 309 FY~~~~q~~~~~l~~~lp~~~~~iHkpEGAIFlWLWf~dLPI----tt~~LYq~L-Ka~Gvl~VPG~~FFpGl~~ewpH~ 383 (417)
T COG3977 309 FYRNRVQTTIAILRRYLPEYRCLIHKPEGAIFLWLWFKDLPI----TTEELYQRL-KARGVLMVPGHYFFPGLDKEWPHT 383 (417)
T ss_pred HHHHHHHHHHHHHHHhcCccceeeecCCcceeehhhhccCCC----CHHHHHHHH-HhCeEEEecccccCCCCCCCCCCc
Confidence 445555555555554 433221 4589999999998876543 567777666 778999999999853
Q ss_pred CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 387 KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 387 ~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.|+|++...++++++.++.+|.+.+++.-
T Consensus 384 hqC~Rmn~~~~~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 384 HQCMRMNYVPEPEKIEKGVAILAEEVERAY 413 (417)
T ss_pred cceEEEecCCCHHHHHHHHHHHHHHHHHHH
Confidence 468999999999999999999999987653
No 108
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-36 Score=265.82 Aligned_cols=335 Identities=25% Similarity=0.400 Sum_probs=267.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEeeCCCCCCcHHHHhhcCC
Q 014769 75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQV 153 (419)
Q Consensus 75 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~~~g~ 153 (419)
+....|+.++|++-+|+.+|+|+.++.|.+.+|++|++|+|++.|+..++..++. +.+.|++|-|.|+.|...+..+|.
T Consensus 104 Gs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsAti~l~~~ 183 (475)
T KOG0258|consen 104 GSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSATISLLGG 183 (475)
T ss_pred CcccccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHHHHHHhCC
Confidence 3567899999999999999999999999999999999999999999999999864 679999999999999999999999
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcC-----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 228 (419)
..+.+.++.+++|.+|.++|++.+.+ +++++++.||.||||++++.+-+++|+.+|.+++++++.||+|....|.
T Consensus 184 ~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~ 263 (475)
T KOG0258|consen 184 TQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYT 263 (475)
T ss_pred cccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhccC
Confidence 99999999999999999999886653 5788999999999999999999999999999999999999999998887
Q ss_pred CC-CCCCccc----cC----CCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHH
Q 014769 229 SI-PYTPMGL----FG----SIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQG 298 (419)
Q Consensus 229 ~~-~~~~~~~----~~----~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 298 (419)
.. .+.++.. ++ +...++.++|.||.+.. -|.|-||+-+-+-. ++..+.+.+..+..-.++...|.
T Consensus 264 ~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~-----prv~~qi~Kl~si~lc~~V~GQ~ 338 (475)
T KOG0258|consen 264 TGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRD-----PRVKQQIKKLASIKLCPQVSGQK 338 (475)
T ss_pred CCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCC-----hhHHHHHHHHHhhhhcCCccchh
Confidence 54 4444321 11 22246889999999654 58999998664421 24555555554444455666676
Q ss_pred HHHHHHcccc---------hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcc-------cccCCCC
Q 014769 299 AIPQILEKTK---------EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPW-------LLEDIND 362 (419)
Q Consensus 299 a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~-------~~~~~~~ 362 (419)
.....+.... ..........++.+.+.+.+.++.++|+.|. +++|+||++.++.-. ...++..
T Consensus 339 ~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAMY~fP~i~lP~kaie~A~~~~~~P 417 (475)
T KOG0258|consen 339 LVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAMYLFPQISLPPKAIEAAKALGIAP 417 (475)
T ss_pred hhceecCCCCCCCcchhhhhhhhHhHHHHHHHHhHHHHHHHhhcCceeec-cCccceeecccccCCHHHHHHHHHhCCCC
Confidence 6655554321 1234456678888999999999999999976 999999998766431 1234456
Q ss_pred HHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 363 DIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 363 ~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
+.-.+.+||+..||.++||++||.. =|+|.++-... + +.+++++++-.++..+
T Consensus 418 D~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~--~-~~i~~~~~fH~~f~~~ 473 (475)
T KOG0258|consen 418 DEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG--L-EIIEKFKKFHAEFMDE 473 (475)
T ss_pred cHHHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch--h-HHHHHHHHHHHHHHHh
Confidence 7778999999999999999999973 26898885544 4 7888888887776543
No 109
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=100.00 E-value=7.3e-35 Score=278.33 Aligned_cols=344 Identities=17% Similarity=0.139 Sum_probs=253.7
Q ss_pred CCCCeeeccCCCCCCCCCCCChH---HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAV---EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~---~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
.|.++|+|+.|+|.. ++++++ ++.+++.+++..+. ..|++..|.++||+++++++. .+++++|+|+
T Consensus 34 ~g~~~~~L~~g~p~~--D~~tds~t~a~~~a~~~a~~~g~-~~Y~~~~g~~~Lreaia~~~~--------~~~vv~t~gg 102 (460)
T PRK13238 34 AGYNPFLLKSEDVFI--DLLTDSGTGAMSDRQWAAMMRGD-EAYAGSRSYYRLEDAVKDIFG--------YPYTIPTHQG 102 (460)
T ss_pred cCCCEEeCCCCCCCC--CCCCCCCchhhhHHHHHHHHhCC-cccCCCCCHHHHHHHHHHHhC--------CCcEEECCCH
Confidence 488999999999842 344444 67788878776554 489999999999999999983 3579999999
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC------CCcc--cChHHHHHhhcC----CccEE
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE------RNWE--VDLDAVEALADK----NTAAM 184 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~------~~~~--~~~~~l~~~~~~----~~~~v 184 (419)
++++..++.++++||| |++++|.|..+...+...|..++.+++++. ++|. +|++.|++.+++ +++++
T Consensus 103 t~A~~~~~~all~pGD-Vii~~p~~~~~~~~i~~~G~~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~I 181 (460)
T PRK13238 103 RAAEQILFPVLIKKGD-VVPSNYHFDTTRAHIELNGATAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFI 181 (460)
T ss_pred HHHHHHHHHHhCCCCC-EEccCCcccchHHHHHHcCCEEEEEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEE
Confidence 9999999999999999 999999999999889999999999988642 3444 999999999874 68899
Q ss_pred EEeCCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccc--cccCC-----CCCCCccccCCCCcEEEEecCCCcCCC
Q 014769 185 VIINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGH--LTFGS-----IPYTPMGLFGSIVPVITLGSISKRWLV 256 (419)
Q Consensus 185 ~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~~~~~-----~~~~~~~~~~~~~~~i~~~s~sK~~~~ 256 (419)
++++|+|||| .+++.+++++|.++|++||+++|+|+++.. ..|.. ....++..+ +..++|++|.+.+
T Consensus 182 vl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i-----~~~~~s~~D~~~~ 256 (460)
T PRK13238 182 VMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEI-----AREMFSYADGLTM 256 (460)
T ss_pred EEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHH-----hhhhcccCcEEEE
Confidence 9999999997 999999999999999999999999997632 33321 111122111 1122233333333
Q ss_pred CCce------eEEEEeeCCCCccchhhHHHHHHhhh----cc-c-cCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHH
Q 014769 257 PGWR------FGWLVTNDPNGIFQKSGIIDSIKDCL----SI-Y-SDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESA 323 (419)
Q Consensus 257 ~G~r------~G~~~~~~~~~~~~~~~~~~~l~~~~----~~-~-~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~ 323 (419)
.|+| .|++++++ +++++.++... .+ + .+.+...|.|++..|.+.. .++++.+ .+++
T Consensus 257 Sg~K~g~~~~GG~i~~~d-------~~l~~~~~~~~~~~~g~~t~~g~~~~~~~Ala~~l~e~~~~~~~~~~----~~~~ 325 (460)
T PRK13238 257 SAKKDAMVNIGGLLCFRD-------EDLFTECRTLCILYEGFPTYGGLAGRDMEALAVGLYEGMDEDYLAYR----IGQV 325 (460)
T ss_pred ecccCCCCcceeEEEcCh-------HHHHHHhhhcccccCCcccccCcHHHHHHHHHhhHHHhhChHHHHHH----HHHH
Confidence 3333 25666553 25777776652 11 2 2334455777777665422 3444443 3357
Q ss_pred HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--c-CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------C
Q 014769 324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--E-DINDDIEFALKLAKEESVIVTPGIYVGL-------------K 387 (419)
Q Consensus 324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------~ 387 (419)
+++.+.|.+. |+.+ ..|.+|+|+++++..... + ...++.+++.+|+++.||.+.|++.|.. .
T Consensus 326 ~~l~~~L~~~-G~~~-~~p~Gg~~v~~d~~~~~~~~~~~~~~~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~ 403 (460)
T PRK13238 326 EYLGEGLEEA-GVPI-QTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPA 403 (460)
T ss_pred HHHHHHHHHC-CCCe-EccCCceEEEEEchhcCCCCCCCCCchHHHHHHHHHHcCeeeecccceecccCCCCccccCCcc
Confidence 8888999887 8884 489999999998854210 0 0113688999999999999999987753 2
Q ss_pred CeEEEEeec---CHHHHHHHHHHHHHHHH
Q 014769 388 NWLRIAFCA---EPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 388 ~~~Ris~~~---~~~~l~~~l~~l~~~~~ 413 (419)
..+|+++.. +.+.++.+.++|..+.+
T Consensus 404 ~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 404 ELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 689999964 89999999999998764
No 110
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-33 Score=247.76 Aligned_cols=368 Identities=21% Similarity=0.214 Sum_probs=277.1
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (419)
+..++.++|..+.+.+. +.+.+++|||++|.-. .....|.-+.|.+|-+..+.......|.+..|.+++++.+++
T Consensus 5 i~~~p~DpIlgL~e~f~----~D~R~~KVNLgIGvY~de~Gk~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ 80 (396)
T COG1448 5 IEAAPADPILGLKEAFK----ADPRPNKVNLGIGVYKDEDGKTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQK 80 (396)
T ss_pred cccCCCCchhHHHHHHh----cCCCcCeeeeeeeeeeCCCCCcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHH
Confidence 34567788888887544 4568899999999321 123456677887777666666667799999999999999999
Q ss_pred HHHhhCCCC---CCCCcE--EEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769 96 YLSRDLPYK---LSADDV--YVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (419)
Q Consensus 96 ~l~~~~~~~---~~~~~i--~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (419)
.+ +|.. +..++| +-|.|||.||......+.. +..+|++++|+|+.+..++...|+++..|+.....+..+
T Consensus 81 ll---FG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~~aGl~v~~Y~Yyd~~~~~~ 157 (396)
T COG1448 81 LL---FGADSPALAEDRVATVQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFEAAGLEVETYPYYDAETKGL 157 (396)
T ss_pred Hh---cCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHHHHHHhcCCceeeeeccccccccc
Confidence 99 4433 445555 6699999999999988854 567899999999999999999999999999876666779
Q ss_pred ChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC-CCCcccc-CCCCc
Q 014769 169 DLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-YTPMGLF-GSIVP 243 (419)
Q Consensus 169 ~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-~~~~~~~-~~~~~ 243 (419)
|.+.+...+.. +..+++-.++|||||..++.++|++|+++.++.+.+.++|-+|.+|.-+.+. ...+..+ .....
T Consensus 158 df~~mla~L~~a~~~~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~ 237 (396)
T COG1448 158 DFDGMLADLKTAPEGSVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPE 237 (396)
T ss_pred cHHHHHHHHHhCCCCCEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCc
Confidence 99988776654 2333344456999999999999999999999999999999999997654221 1111111 12223
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-----hHHHHHHHH
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-----EDFFCKLID 317 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~ 317 (419)
++++.|+||.|++.|.|+|.+.+-.++.... ..+...+... +...++|+......++.+|.... ...+..+++
T Consensus 238 ~lva~S~SKnfgLYgERVGa~~vva~~~~~a-~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p~Lra~W~~El~~Mr~ 316 (396)
T COG1448 238 LLVASSFSKNFGLYGERVGALSVVAEDAEEA-DRVLSQLKAIIRTNYSNPPAHGAAVVATILNNPELRAEWEQELEEMRQ 316 (396)
T ss_pred EEEEehhhhhhhhhhhccceeEEEeCCHHHH-HHHHHHHHHHHHhccCCCchhhHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 7999999999999999999976544321110 0222333333 34567788888888889998743 234677889
Q ss_pred HHHHHHHHHHHHhhcC-C--CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769 318 TLRESAEICYDGVKEI-P--CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF 394 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~-~--~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~ 394 (419)
++.++|..+.+.|++. + .+. +...+.|||.+..+. .+.+.+|.++++|++..+. |||+
T Consensus 317 Ri~~mR~~lv~~L~~~~~~~~f~-~i~~Q~GMFsy~Gls----------~~QV~rLree~~IY~v~sG--------Ri~v 377 (396)
T COG1448 317 RILEMRQALVDALKALGAPRNFD-FIISQRGMFSYTGLS----------PEQVDRLREEFGIYLVASG--------RINV 377 (396)
T ss_pred HHHHHHHHHHHHHHhhCCCcccc-hHhhcCceeecCCCC----------HHHHHHHHHhccEEEecCC--------eeee
Confidence 9999999999999973 2 365 447788999987653 3456788899999987654 9999
Q ss_pred -ecCHHHHHHHHHHHHHH
Q 014769 395 -CAEPSALKDGLGRMKAF 411 (419)
Q Consensus 395 -~~~~~~l~~~l~~l~~~ 411 (419)
+.++.+++.+.+.|.++
T Consensus 378 aGl~~~ni~~va~ai~~v 395 (396)
T COG1448 378 AGLNTSNIDYVAKAIAAV 395 (396)
T ss_pred ccCChhhHHHHHHHHHhh
Confidence 68999999999988875
No 111
>PLN02822 serine palmitoyltransferase
Probab=100.00 E-value=9.4e-33 Score=266.27 Aligned_cols=349 Identities=15% Similarity=0.143 Sum_probs=253.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
.|+++|||+.|++ +.+..+|.+++++.++++. +. ...|++..+..+|+++|++++. .++.|+++
T Consensus 107 ~G~~~id~~s~~~---lgl~~~~~i~ea~~~al~~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~-------~~~~i~~s 176 (481)
T PLN02822 107 NGKDVVNFASANY---LGLIGNEKIKESCTSALEKYGVGSCGPRGFYGTIDVHLDCETKIAKFLG-------TPDSILYS 176 (481)
T ss_pred CCceEEEeECCCc---CCCCCCHHHHHHHHHHHHHhCCCCcccCccccCHHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 4788999999974 3566799999999999876 21 1246666778999999999983 35788888
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh--cCCc-cEEEEeCCC
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNT-AAMVIINPG 190 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~-~~v~i~~p~ 190 (419)
+|.+ ++..++.+++++||.|++....|..+...+...+.+++++++.+.+++..+++.++... .+++ +++++..++
T Consensus 177 ~G~~-a~~sai~a~~~~gd~Ii~d~~~H~s~~~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~ 255 (481)
T PLN02822 177 YGLS-TIFSVIPAFCKKGDIIVADEGVHWGIQNGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIY 255 (481)
T ss_pred CHHH-HHHHHHHHhCCCCCEEEEeCCccHHHHHHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCC
Confidence 8877 57889999999999999888877777777788888888887542222222233332221 1234 566777778
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
|++|.+.| +++|.++|++||+++|+||+|+.+.++..+ ......+......++++||||.+++.| ||+++++
T Consensus 256 ~~~G~i~~---L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G---G~i~g~~ 329 (481)
T PLN02822 256 QNSGQIAP---LDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALATEG---GFCTGSA 329 (481)
T ss_pred CCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhhhCC---eEEEcCH
Confidence 99999999 899999999999999999999977776322 111111222245688999999998888 9999865
Q ss_pred CCCccchhhHHHHHHhhh-ccccCC--chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769 269 PNGIFQKSGIIDSIKDCL-SIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
++++.++... .+.++. ++..+.++.++|+.. +...+..++++++++.+++.|++.+++. +..+.++
T Consensus 330 --------~ii~~~~~~~~~~~fsa~lPp~~~~Aa~~aL~~l--~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~~~~s 398 (481)
T PLN02822 330 --------RVVDHQRLSSSGYVFSASLPPYLASAAITAIDVL--EDNPSVLAKLKENIALLHKGLSDIPGLS-IGSNTLS 398 (481)
T ss_pred --------HHHHHHHhcCCceeeccccCHHHHHHHHHHHHHH--HhCHHHHHHHHHHHHHHHHHHHhcCCcc-cCCCCCC
Confidence 5777776443 223333 355667776777542 2235678899999999999999877877 4466788
Q ss_pred EEEEeecCcccccCCC-C---HHHHHHHHHHhcCeEeecCCC--CCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769 346 MVTMVKLNPWLLEDIN-D---DIEFALKLAKEESVIVTPGIY--VGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~-~---~~~~~~~ll~~~gv~v~~g~~--~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~ 414 (419)
+++++.++...- ... + ..+++.+|++++||.+.|+.+ |+. +.++|++++ .++++|++++++|++++.+
T Consensus 399 pi~~l~l~~~~~-~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~~~~~~~~~~~~lRi~is~~~t~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 399 PIVFLHLEKSTG-SAKEDLSLLEHIADRMLKEDSVLVVVSKRSTLDKCRLPVGIRLFVSAGHTESDILKASESLKRVAAS 477 (481)
T ss_pred CEEEEEeCCCcc-cccchHHHHHHHHHHHHhcCCEEEEeeCCCCcCCCCCCCcEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 888888863200 000 1 357888888788999998743 321 457999874 7999999999999999988
Q ss_pred Hhc
Q 014769 415 HTK 417 (419)
Q Consensus 415 ~~~ 417 (419)
..+
T Consensus 478 ~~~ 480 (481)
T PLN02822 478 VLK 480 (481)
T ss_pred Hhc
Confidence 754
No 112
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=100.00 E-value=2.8e-32 Score=252.44 Aligned_cols=306 Identities=15% Similarity=0.159 Sum_probs=224.9
Q ss_pred CCCChHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769 57 CFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL 135 (419)
Q Consensus 57 ~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl 135 (419)
.+..+|.++++..++++. |+ ...-..+|++.+|+++ +.+++++++++|+++++..++.++.++||.|+
T Consensus 31 gl~~~~~~~~~~~~~~~~-----~~g~~~~~~~Le~~lA~~~------g~~~e~ilv~~gg~~a~~~~~~al~~~gd~Vl 99 (346)
T TIGR03576 31 GLAGGFKIDEEDLELLET-----YVGPAIFEEKVQELGREHL------GGPEEKILVFNRTSSAILATILALEPPGRKVV 99 (346)
T ss_pred cCCCChhHHHHHHHHHHH-----hcCCHHHHHHHHHHHHHHc------CCCcceEEEECCHHHHHHHHHHHhCCCCCEEE
Confidence 355678888888888754 31 2223455666666665 45789999999999999999999999999999
Q ss_pred ee---CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 136 LP---RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 136 v~---~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
++ .|+|..+...++..|.++..+ .+++.++. . +++++|++ ++++|+|.+++.+++++|+++|+++
T Consensus 100 i~~~d~p~~~s~~~~~~l~ga~~~~~---------~~l~~l~~-~-~~~~lIii-tg~s~~G~v~~~~~L~~i~~la~~~ 167 (346)
T TIGR03576 100 HYLPEKPAHPSIPRSCKLAGAEYFES---------DELSELKK-I-DGTSLVVI-TGSTMDLKVVSEEDLKRVIKQAKSK 167 (346)
T ss_pred ECCCCCCCchhHHHHHHHcCCEEecc---------CCHHHHhh-C-cCceEEEE-ECCCCCCcccCHHHHHHHHHHHHHc
Confidence 75 478888888889889875322 13444432 2 35666666 5679999999999999999999999
Q ss_pred CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccC
Q 014769 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSD 291 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 291 (419)
|+++|+||+|+.+..+.....+...++. .++++||||. ++|+|+||++++. ++++.++.... +..+
T Consensus 168 ~~~livDEAy~~~~~~~~~~~~~~~~~~---divv~s~SKa--laG~r~G~v~~~~--------~li~~l~~~~~~~~~s 234 (346)
T TIGR03576 168 EAIVLVDDASGARVRRLYGQPPALDLGA---DLVVTSTDKL--MDGPRGGLLAGRK--------ELVDKIKSVGEQFGLE 234 (346)
T ss_pred CCEEEEECCccccccccCCCCCHHHcCC---cEEEeccchh--ccccceEEEEeCH--------HHHHHHHHhhcCcccC
Confidence 9999999999986532111112222222 2677899994 7899999999875 68888887653 3344
Q ss_pred CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH
Q 014769 292 IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA 371 (419)
Q Consensus 292 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll 371 (419)
.+++.|.++..+|+... .+..+..++++++.+.+.++.+ . + .|..+.|+|++++.. ++.+++.+++
T Consensus 235 ~~~~~~~aa~~aL~~~~---~~~~~~~l~~r~~~~~~~l~~~---~-~-~~~~~~f~~~~~~~~------~~~~~~~~ll 300 (346)
T TIGR03576 235 AQAPLLAAVVRALEEFE---LSRIRDAFKRKEEVYLRLFDKL---N-V-ERTPTGFVIKGVEEE------KLIEIGLDLL 300 (346)
T ss_pred ccHHHHHHHHHHHhhcc---HHHHHHHHHHHHHHHHHHHHhC---C-C-CcCCCeEEEEeCCCC------CHHHHHHHHH
Confidence 67888888888887522 3456778888888888877643 3 3 233444899988631 3567888999
Q ss_pred HhcCeEeecCCCCC-CCCeEEEEeecCHH---HHHHHHHHHHHHH
Q 014769 372 KEESVIVTPGIYVG-LKNWLRIAFCAEPS---ALKDGLGRMKAFC 412 (419)
Q Consensus 372 ~~~gv~v~~g~~~~-~~~~~Ris~~~~~~---~l~~~l~~l~~~~ 412 (419)
+++||.+.||+.|. .++|+||+++.+++ +.+.+++.|++.+
T Consensus 301 ~~~gV~v~~~~~f~~~~~~vRis~~~~~~~~~~~~~~~~al~~~~ 345 (346)
T TIGR03576 301 RNYGIITITAVGMPGASKTLRFDLAAKDAERIGDDYLVEAVKDSL 345 (346)
T ss_pred HhCCEEEeCCcccCCCCCeEEEEEecChHHhcCHHHHHHHHHhcc
Confidence 99999999998884 47899999998765 7888888887654
No 113
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=100.00 E-value=2.9e-31 Score=253.24 Aligned_cols=333 Identities=14% Similarity=0.120 Sum_probs=242.2
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCC-------CCCHHHHHHHHHHHHhhCCCCC-CCCcEEE
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATN-------SGIPPARRAIADYLSRDLPYKL-SADDVYV 112 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~-------~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~ 112 (419)
++.|-|..+.-+ ++++.+.+++.+.+.....+ .+... ..+.++|+.+++++ +. ++++|++
T Consensus 15 ~~~iyld~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 83 (398)
T TIGR03392 15 DGTVYLDSAATA-----LKPQAVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFL------NAPDAENIVW 83 (398)
T ss_pred CCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEE
Confidence 357888888632 46788889988876532111 12211 23456888999988 45 4789999
Q ss_pred cccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 113 TLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 113 t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
|+|++++++.++.++ .++||+|++++|+|++ +...++..|.+++.++++. ++.+|++.++++++++++++
T Consensus 84 t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~~~~~l~~~i~~~t~lv 161 (398)
T TIGR03392 84 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGA--DLLPDIRQLPELLTPRTRIL 161 (398)
T ss_pred eCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHHhccCceEE
Confidence 999999999999988 4789999999999976 3456678899999998753 35689999999998889999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
++++|+||||.++| +++|.++|+++|+++++|++|+...+ ...+..++. .+++.|++|.++.+| +||+
T Consensus 162 ~i~~~~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~gp~G--~G~l 229 (398)
T TIGR03392 162 ALGQMSNVTGGCPD---LARAITLAHQYGAVVVVDGAQGVVHG----PPDVQALDI---DFYAFSGHKLYGPTG--IGVL 229 (398)
T ss_pred EEECccccccccCC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CCChhhcCC---CEEEEecccccCCCc--eEEE
Confidence 99999999999999 88899999999999999999975332 122222332 377788999876666 8999
Q ss_pred EeeCCCCccchhhHHHHHHhhh---------------------c-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCL---------------------S-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~---------------------~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (419)
++++ ++++.+.... . ..++++.....++..+++.......++..++.++.
T Consensus 230 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~~l 301 (398)
T TIGR03392 230 YGKT--------ELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSL 301 (398)
T ss_pred EEcH--------HHHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8865 3444332111 0 12355665666666666543334455677888888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEEEEe
Q 014769 323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLRIAF 394 (419)
Q Consensus 323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~Ris~ 394 (419)
++.+.+.|++++++.....+. +.++++.++. .+..++...| .++||.+.+|..+. .++++|+|+
T Consensus 302 ~~~l~~~l~~l~g~~~~~~~~-~~i~~~~~~~------~~~~~l~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRvS~ 373 (398)
T TIGR03392 302 ADLAEERLAQLPGFRSFRCPG-SSLLAFDFAG------VHHSDLAALL-AESGIALRAGQHCAQPLMAALGVSGTLRASF 373 (398)
T ss_pred HHHHHHHHhcCCCeEEeCCCC-CcEEEEEeCC------cCHHHHHHHH-HhCCEEEecCccchHHHHHHhCCCCEEEEEe
Confidence 999999998888876332343 4455555552 1456676665 67899999988653 357999999
Q ss_pred e--cCHHHHHHHHHHHHHHHHHH
Q 014769 395 C--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 395 ~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+ .+++|++.+++.|+++++++
T Consensus 374 ~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 374 APYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred eccCCHHHHHHHHHHHHHHHHHh
Confidence 4 68999999999999988764
No 114
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=100.00 E-value=4.8e-31 Score=251.95 Aligned_cols=333 Identities=15% Similarity=0.121 Sum_probs=243.2
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC--CCCC------CCCCHHHHHHHHHHHHhhCCCCC-CCCcEEE
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN--CYAT------NSGIPPARRAIADYLSRDLPYKL-SADDVYV 112 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~------~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~ 112 (419)
.+.+.|..+..+ +.++.+.+++.+.+.....+ .... ...+.++|+.+++++ +. ++++|++
T Consensus 18 ~~~~yld~a~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~~i~~ 86 (401)
T PRK10874 18 DAGVYLDSAATA-----LKPQAVIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLL------NAPDAKNIVW 86 (401)
T ss_pred CceEEEeCCccc-----CCCHHHHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CCCCCCEEEE
Confidence 457888888632 46778889998877542110 0000 122567888888887 55 6889999
Q ss_pred cccHHHHHHHHHHHhc----CCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 113 TLGCKQAVEVILSVLA----RPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 113 t~g~~~al~~~~~~l~----~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
|+|++++++.++.++. ++||+|++++|+|++ +...++..|.+++.++++. ++.+|++++++.++++++++
T Consensus 87 ~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv 164 (401)
T PRK10874 87 TRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGA--DRLPDVDLLPELITPRTRIL 164 (401)
T ss_pred ECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecCC--CCcCCHHHHHHhcCcCcEEE
Confidence 9999999999999983 689999999999875 4455677899999988753 45789999999998899999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
++++|+||||.++| +++|.++|+++|+++|+|++|+...+ ...+..++ ..+++.|++|.++.+| +||+
T Consensus 165 ~i~~~~n~tG~~~~---~~~i~~l~~~~g~~~ivD~a~~~g~~----~~~~~~~~---~d~~~~s~~K~~gp~G--~G~l 232 (401)
T PRK10874 165 ALGQMSNVTGGCPD---LARAITLAHQAGMVVMVDGAQGAVHF----PADVQALD---IDFYAFSGHKLYGPTG--IGVL 232 (401)
T ss_pred EEeCCcccccCcCC---HHHHHHHHHHcCCEEEEECCcccccc----cCCchhcC---CCEEEEecccccCCCc--cEEE
Confidence 99999999999999 88999999999999999999975332 12222332 3377889999877666 6998
Q ss_pred EeeCCCCccchhhHHHHHHhhh----------------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCL----------------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~----------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (419)
++++ ++++.+.... ...++++...+.++..+++........+..++.++.
T Consensus 233 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~~~l 304 (401)
T PRK10874 233 YGKS--------ELLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWSRSL 304 (401)
T ss_pred EEch--------HHHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHHH
Confidence 8765 3444332111 012355666777777777653334455567788888
Q ss_pred HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEEEEe
Q 014769 323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLRIAF 394 (419)
Q Consensus 323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~Ris~ 394 (419)
++.+.+.|+++|++..+..+. +.++++.++. .+..++...| .++||.+.+|..+. ..+++|+|+
T Consensus 305 ~~~l~~~l~~~~g~~~~~~~~-~~i~~~~~~~------~~~~~~~~~L-~~~gI~v~~g~~~~~~~~~~~g~~~~iRiS~ 376 (401)
T PRK10874 305 ATLAEDALAKLPGFRSFRCQD-SSLLAFDFAG------VHHSDLVTLL-AEYGIALRAGQHCAQPLLAALGVTGTLRASF 376 (401)
T ss_pred HHHHHHHHhcCCCEEEeCCCC-CcEEEEEECC------cCHHHHHHHH-HHCCcEEeccccchHHHHHHhCCCCEEEEEe
Confidence 999999999888887442344 4455556653 1356666555 77899999988653 368999999
Q ss_pred e--cCHHHHHHHHHHHHHHHHHH
Q 014769 395 C--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 395 ~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+ .++++++.+++.|++++.++
T Consensus 377 ~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 377 APYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred cccCCHHHHHHHHHHHHHHHHHh
Confidence 5 58999999999999988764
No 115
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=100.00 E-value=6.5e-31 Score=250.67 Aligned_cols=331 Identities=16% Similarity=0.167 Sum_probs=237.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCC---CC----HHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS---GI----PPARRAIADYLSRDLPYKLSADDVYV 112 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---g~----~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (419)
+|.++|||+.|++ +.++.+|.+++++.+++..... .|+++. |. .++|+++++++. .+++++
T Consensus 36 ~g~~~i~~~~~~~---lg~~~~~~v~~~~~~~~~~~~~-~~~~s~~~~G~~~~~~~le~~ia~~~g--------~~~~ii 103 (393)
T TIGR01822 36 DGREVLNFCANNY---LGLSSHPDLIQAAKDALDEHGF-GMSSVRFICGTQDIHKELEAKIAAFLG--------TEDTIL 103 (393)
T ss_pred CCceEEEeeCCCc---cccCCCHHHHHHHHHHHHHhCC-CCCCcCcccCChHHHHHHHHHHHHHhC--------CCcEEE
Confidence 4788999999984 4577889999999998875322 566555 76 788999999883 257788
Q ss_pred cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEE
Q 014769 113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVI 186 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i 186 (419)
++|+++++..++.+++++||.|++++|.|+++...+...+.....+. ..|++.+++++++ ++++|++
T Consensus 104 ~~~~~~a~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~~~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~ 176 (393)
T TIGR01822 104 YASCFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYA-------NNDMADLEAQLKEARAAGARHRLIAT 176 (393)
T ss_pred ECchHHHHHHHHHHhCCCCCEEEEeccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEE
Confidence 88999999999999999999999999999998887777776654432 2688888887764 5677777
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
.+++||||.+.+ +++|+++|+++|+++|+|++|+...++... ........ .+..++++|+||.+ +|+|+||+
T Consensus 177 ~~v~~~tG~~~~---l~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~di~~~s~sK~l--~g~r~G~~ 250 (393)
T TIGR01822 177 DGVFSMDGVIAP---LDEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVM-GRVDIITGTLGKAL--GGASGGFT 250 (393)
T ss_pred eCCccCCCCcCC---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCC-CCCeEEEEEChHHh--hCCCcEEE
Confidence 788999999988 899999999999999999999754332211 11111111 13458899999984 57899999
Q ss_pred EeeCCCCccchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK 341 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 341 (419)
+++. ++++.++... . .+.+.++..+.++.++++.. +..++.+++++++++.+.+.|++. ++.+. .
T Consensus 251 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 318 (393)
T TIGR01822 251 TARK--------EVVELLRQRSRPYLFSNSLPPAVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-P 318 (393)
T ss_pred EeCH--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-C
Confidence 8865 5777666532 2 22233444445555555432 234567788999999999999876 77633 4
Q ss_pred CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.+. ++.+.++.. .+..+++..|++ +||.+. +..|. ....+|++++ .++++|++++++|+++++++
T Consensus 319 ~~~~-~~~i~~~~~-----~~~~~l~~~L~~-~gI~v~-~~~~~~~~~~~~~iRis~~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 319 ADHP-IIPVMLYDA-----VLAQRFARRLLE-EGIYVT-GFFYPVVPKGQARIRVQISAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CCCC-EEEEEeCCH-----HHHHHHHHHHHH-CCeeEe-eeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 4444 444444321 135677777755 599987 44442 1246999884 58999999999999987754
No 116
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=100.00 E-value=6.4e-31 Score=248.11 Aligned_cols=327 Identities=15% Similarity=0.136 Sum_probs=233.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCC----CHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSG----IPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
.|.++|||+.|+| ..++.+|.+++++.++++.... ..|....| ..++++++++++. .++.|+++
T Consensus 14 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~-------~~~~i~~~ 83 (360)
T TIGR00858 14 DGRRLLNFSSNDY---LGLASHPEVIQAAQQGAEQYGAGSTASRLVSGNSPLHEELEEELAEWKG-------TEAALLFS 83 (360)
T ss_pred CCceEEecccCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC-------CCCEEEEC
Confidence 4889999999964 1345678999999998864211 12222233 3457777777762 25677777
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCC
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINP 189 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p 189 (419)
+|+.+ +..++.+++++||.|+++.|+|..+...+...|.++..++. +|++.+++.++. +++++++.++
T Consensus 84 ~G~~~-~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~~~~~~~~~~~~v~~~~~ 155 (360)
T TIGR00858 84 SGYLA-NVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRH-------NDVEHLERLLEKNRGERRKLIVTDGV 155 (360)
T ss_pred chHHH-HHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEecC-------CCHHHHHHHHHHcccCCCeEEEEeCC
Confidence 77544 55577888899999999999999998888888988877652 478888887754 3567777888
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC--CCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY--TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
+||||...+ +++|.++|+++++++|+||+|..+.++.... .....+..++++++++|+||.++++| ||++++
T Consensus 156 ~~~~G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~g---G~~~~~ 229 (360)
T TIGR00858 156 FSMDGDIAP---LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSYG---AYVAGS 229 (360)
T ss_pred ccCCCCCcC---HHHHHHHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhccC---cEEEcC
Confidence 999999888 8999999999999999999998765543221 22222333467899999999988776 999876
Q ss_pred CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.+..... ...+.++..+.++.++++.. ....+.+++++++++.+.+.|+++ ++. + .+.+
T Consensus 230 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~ 296 (360)
T TIGR00858 230 Q--------ALIDYLINRARTLIFSTALPPAVAAAALAALELI--QEEPWRREKLLALIARLRAGLEAL-GFT-L-MPSC 296 (360)
T ss_pred H--------HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHH--hhCHHHHHHHHHHHHHHHHHHHHc-CCc-c-CCCC
Confidence 4 56666654321 12234444455555666532 223566789999999999999987 666 4 3556
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMK 409 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~ 409 (419)
+.++|+.++.. .+..++..+| .++||.+.++..++. .+++|++++ .+++++++++++|+
T Consensus 297 ~~~~~~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~iRis~~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 297 TPIVPVIIGDN-----ASALALAEEL-QQQGIFVGAIRPPTVPAGTSRLRLTLSAAHTPGDIDRLAEALK 360 (360)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHH-HHCCeeEeeeCCCCCCCCCceEEEEEcCCCCHHHHHHHHHhhC
Confidence 77888887631 1356777777 567999998766542 468999996 48999999998874
No 117
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=1e-30 Score=249.99 Aligned_cols=337 Identities=16% Similarity=0.107 Sum_probs=238.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+|.++|||+.|++ +.++.++.+.+++.+.+..... ..|....|..++++.+++++.+.+|. +++|++|+| +
T Consensus 40 ~g~~~i~l~~~~~---~~~~~~~~i~~a~~~~~~~~~~~~~~~~~~~G~~~l~~~l~~~la~~~g~---~~~i~~tsG-~ 112 (397)
T PRK06939 40 DGKEVINFCANNY---LGLANHPELIAAAKAALDSHGFGMASVRFICGTQDLHKELEEKLAKFLGT---EDAILYSSC-F 112 (397)
T ss_pred CCCeEEEeeccCc---cccCCCHHHHHHHHHHHHHcCCCCcccccccCCcHHHHHHHHHHHHHhCC---CcEEEEcCh-H
Confidence 5888999999973 3567789999999988865322 12333568889999999999887773 367888887 7
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGN 191 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n 191 (419)
+++..++.+++++||.|++++|+|+.+...+...+.++..++. .|++.+++.+++ ++++++..+..|
T Consensus 113 ~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~ 185 (397)
T PRK06939 113 DANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFS 185 (397)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcC
Confidence 7888999999999999999999999998888888888776643 367777776653 455556556689
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC--CCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG--SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
++|...+ +++|.++|+++++++|+||+|+...+. +........+. ...+++++|+||.+ .|+|+||++++.
T Consensus 186 ~~G~~~~---~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~-~~~~i~~~S~sK~~--~g~r~G~v~~~~- 258 (397)
T PRK06939 186 MDGDIAP---LPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVM-DRVDIITGTLGKAL--GGASGGYTAGRK- 258 (397)
T ss_pred CCCCcCC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCC-CCCcEEEEECHHHh--CccCceEEEeCH-
Confidence 9998766 899999999999999999999643222 21111111121 12468999999996 356899999865
Q ss_pred CCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769 270 NGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM 346 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 346 (419)
++++.++.... ...+.++..+.++.++++.. ....+.+++++++++.+.+.|+++ ++. ...+.+++
T Consensus 259 -------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~~~~ 327 (397)
T PRK06939 259 -------EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELL--EESDELRDRLWENARYFREGMTAA-GFT-LGPGEHPI 327 (397)
T ss_pred -------HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCCCCE
Confidence 57777765321 12233344445554555432 123467788899999999999887 666 33455565
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+. +.++.. .++.+++..|+++ ||.+.++.+.. ..+++|++++ .+++++++++++|++++++.
T Consensus 328 ~~-~~~~~~-----~~~~~~~~~L~~~-gI~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 328 IP-VMLGDA-----KLAQEFADRLLEE-GVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred EE-EEECCH-----HHHHHHHHHHHHC-CceEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHh
Confidence 43 334321 1356788887665 99998654321 1368999983 68999999999999998764
No 118
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=100.00 E-value=1.7e-30 Score=244.74 Aligned_cols=346 Identities=18% Similarity=0.181 Sum_probs=249.6
Q ss_pred CCCCeeeccCCCCCCCCCCCCh---HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTA---VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~---~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
.|-+++.|..+++..+ +..+ .++.++...++..++. .|+++.|.++|++++++++. .+++++|+|+
T Consensus 9 ~g~n~~~l~~~~v~iD--lltds~t~ams~~~~~a~~~gd~-~Y~~~~g~~~Leeaia~~~g--------~~~vv~t~~G 77 (431)
T cd00617 9 AGYNVFLLRSEDVYID--LLTDSGTGAMSDYQWAAMMLGDE-AYAGSKSFYDLEDAVQDLFG--------FKHIIPTHQG 77 (431)
T ss_pred cCCCEEeCCCCCcCCC--CCCCCCcHHHHHHHHHHHHhCCC-ccCCCCCHHHHHHHHHHHHC--------CCeEEEcCCH
Confidence 4999999999998443 3333 3565666666665553 69999999999999999983 3689999999
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC--------cccChHHHHHhhcCC----ccEE
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN--------WEVDLDAVEALADKN----TAAM 184 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~--------~~~~~~~l~~~~~~~----~~~v 184 (419)
++|+..++.++++|||.| +++|.|..+...+...|..++.+++++..+ +.+|++.|+++++++ +++|
T Consensus 78 t~Al~la~~al~~pGD~V-~~~~~f~~~~~~i~~~Ga~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I 156 (431)
T cd00617 78 RGAENILFSILLKPGRTV-PSNMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYI 156 (431)
T ss_pred HHHHHHHHHHhCCCCCEE-ccCCcccchHHHHHhCCCEeEEEecccccccccccCCCCCcCHHHHHHHhCcccCCCccEE
Confidence 999999999999999987 689999999888999999999999875432 449999999999865 6788
Q ss_pred EEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEccccccc--cc-----CCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769 185 VIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHL--TF-----GSIPYTPMGLFGSIVPVITLGSISKRWLV 256 (419)
Q Consensus 185 ~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~-----~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 256 (419)
+++.|+||+ |+.++.+++++|.++|+++|+++|+|+++... .+ ++....++.. .++.++|++|.+.+
T Consensus 157 ~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~e-----i~~e~~s~sd~~~m 231 (431)
T cd00617 157 VLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAE-----IAREMFSYADGCTM 231 (431)
T ss_pred EEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHH-----HHHHhhccCCEEEE
Confidence 999999998 99999999999999999999999999995431 22 1111122211 12345566666666
Q ss_pred CCce------eEEEEeeCCCCccchhhHHHHHHhhh----cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 257 PGWR------FGWLVTNDPNGIFQKSGIIDSIKDCL----SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 257 ~G~r------~G~~~~~~~~~~~~~~~~~~~l~~~~----~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
.|+| .||++++++ +++++++... .. .++.+.-...+++..|++... .+...+++ ++++
T Consensus 232 S~~K~~~~~~GG~i~~~d~-------~l~~~~~~~~~~~~~~~~~gG~~~r~~~A~A~gL~e~~~--~~~l~~~~-~~r~ 301 (431)
T cd00617 232 SAKKDGLVNIGGFLALRDD-------ELYEEARQRVVLYEGFVTYGGMAGRDMEALAQGLREAVE--EDYLRHRV-EQVR 301 (431)
T ss_pred EeecCCCCccceEEEeCcH-------HHHHHHHHhccccCCccccccccHHHHHHHHHHHHhccc--HHHHHHHH-HHHH
Confidence 6665 568888652 4777777532 11 122233333444445654211 22223333 3558
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeec-CCCC-CC-----------CC
Q 014769 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTP-GIYV-GL-----------KN 388 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~-g~~~-~~-----------~~ 388 (419)
++.+.|.+. |+. +..|.+|+++|++.+.... ....++.+++.+|+++.||.+.- |+.. +. -.
T Consensus 302 ~l~~~L~~~-G~~-v~~P~Ggh~v~~d~~~~~~~~~~~~~~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~ 379 (431)
T cd00617 302 YLGDRLDEA-GVP-IVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELE 379 (431)
T ss_pred HHHHHHHHC-CCC-ccCCCcceEEEEEhHHhcCCCCcccCcHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccc
Confidence 888999988 888 4489999999998864210 01125789999999999999653 4311 10 25
Q ss_pred eEEEEe---ecCHHHHHHHHHHHHHHHHH
Q 014769 389 WLRIAF---CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 389 ~~Ris~---~~~~~~l~~~l~~l~~~~~~ 414 (419)
.+||++ ..+.+.++.+.+.|..+.++
T Consensus 380 ~~rl~~prr~~t~~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 380 LVRLAIPRRVYTQDHMDYVAAAVIALYER 408 (431)
T ss_pred eeEEeccccccCHHHHHHHHHHHHHHHhh
Confidence 799999 45899999999999988865
No 119
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=100.00 E-value=6.6e-30 Score=243.17 Aligned_cols=335 Identities=16% Similarity=0.180 Sum_probs=240.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.|+++|||+.|++ +.++.+|.+.+++.+++... ....|....|..++++.+++++.+..|. ++.+++++| +
T Consensus 31 ~g~~~id~~~~~~---~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~---~~~i~~~sG-~ 103 (385)
T TIGR01825 31 NGKEVINLSSNNY---LGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKT---EAALVFQSG-F 103 (385)
T ss_pred CCceEEEeeccCc---cCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCC---CcEEEECcH-H
Confidence 4889999999863 35677889999999887642 2346777889999999999999887773 356777777 5
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCcc
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPC 193 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~npt 193 (419)
+++..++.+++++||.|+++.|+|..+...+...|.++..++ .+|++.+++.+.+ +++++++.+++|||
T Consensus 104 ~a~~~a~~~~~~~gd~vi~~~~~~~~~~~~~~~~g~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~t 176 (385)
T TIGR01825 104 NTNQGVLSALLRKGDIVLSDELNHASIIDGLRLTKATKKIYK-------HADMDDLDRVLRENPSYGKKLIVTDGVFSMD 176 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEEccccHHHHHHHHhcCCceEEeC-------CCCHHHHHHHHHhhccCCCeEEEEecCCcCC
Confidence 667788888899999999999999988777777777765543 3577777776543 56677777789999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc--cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM--GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~--~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
|.+.+ +++|.++|+++|+++|+||+|+.+.++....... ..+. .+.++++.||||.++++| ||++++.
T Consensus 177 G~~~~---~~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~g---G~~~~~~--- 246 (385)
T TIGR01825 177 GDVAP---LPEIVELAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLE-DKVDIQVGTLSKAIGVVG---GYAAGHK--- 246 (385)
T ss_pred CCccC---HHHHHHHHHHhCCEEEEECcccccCcCCCCCccHhhcCCC-cCCcEEEEeccHHhhcCC---CEEecCH---
Confidence 99998 8899999999999999999998765542111111 1222 346789999999987666 9988754
Q ss_pred ccchhhHHHHHHhhhc-c--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769 272 IFQKSGIIDSIKDCLS-I--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 348 (419)
++++.+..... + +...+++.+.++.++++.... ..+..++++++++.+.+.|+++ ++. +..|.+. ++
T Consensus 247 -----~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~-~~ 316 (385)
T TIGR01825 247 -----ELIEYLKNRARPFLFSTAQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYD-TGGSETP-IT 316 (385)
T ss_pred -----HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCCC-EE
Confidence 56777765421 1 223455667777776654211 1245667778889999999887 777 3355554 44
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+.++.. .+..+++..|+++ ||.+. +..|.. ..++|+++ ..+++++++++++|+++++++
T Consensus 317 ~~~~~~~-----~~~~~~~~~L~~~-gi~v~-~~~~~~~~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~ 382 (385)
T TIGR01825 317 PVVIGDE-----KAAQEFSRRLFDE-GIFAQ-SIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKEL 382 (385)
T ss_pred EEEECCH-----HHHHHHHHHHHHC-CcEEc-ccCCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHh
Confidence 4444321 1346777787665 99884 443432 36899987 479999999999999998754
No 120
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.9e-30 Score=246.42 Aligned_cols=342 Identities=13% Similarity=0.101 Sum_probs=236.5
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||..|.+... ..+.+|.+.+++.+++..... ....+..++++.+++++.+..+ .+++++++|+++
T Consensus 36 ~dg~~~iD~~~g~~~~~-lG~~~p~v~~a~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~----~~~v~~~~gg~e 107 (396)
T PRK02627 36 DDGKEYLDFLAGIAVNN-LGHCHPKLVEAIQEQAAKLIH---TSNLYYIEPQEELAEKLVELSG----MDKVFFCNSGAE 107 (396)
T ss_pred CCCCEEEECCccHHhcc-CCCCCHHHHHHHHHHHhhccc---cccccCCHHHHHHHHHHHhhcC----CCEEEECCCcHH
Confidence 35888999999866532 122368999999998865321 1112335788888888877533 479999999999
Q ss_pred HHHHHHHHhcCCC-------CeEEeeCCCCCCcHHHHhhcCCEEE-EEeccC-CCCc----ccChHHHHHhhcCCccEEE
Q 014769 119 AVEVILSVLARPG-------ANVLLPRPGWPYYEGIAQRKQVEVR-HFDLLP-ERNW----EVDLDAVEALADKNTAAMV 185 (419)
Q Consensus 119 al~~~~~~l~~~g-------d~vlv~~p~~~~~~~~~~~~g~~~~-~~~~~~-~~~~----~~~~~~l~~~~~~~~~~v~ 185 (419)
|+..+++.++..+ ++|++..++|+++.......+.... .....+ ..++ ..|++.+++++.+++++++
T Consensus 108 A~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~vi 187 (396)
T PRK02627 108 ANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPFNDIEALKAAITDKTAAVM 187 (396)
T ss_pred HHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCCCCCCCceEeCCCCHHHHHHhcCCCeEEEE
Confidence 9999999776433 6799999999987655444332211 101111 0111 1288999999987788888
Q ss_pred EeCCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 186 IINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 186 i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
+..++||+| ..++.+++++|.++|+++|+++|+||+|.++.+.+.. ..+...+..+++ .||||.++ +|+|+||+
T Consensus 188 i~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~rig~~ 262 (396)
T PRK02627 188 LEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKL-FAYQHYGIEPDI---MTLAKGLG-GGVPIGAV 262 (396)
T ss_pred EecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCce-eeehhcCCCCCE---EEEcchhh-CCcccEEE
Confidence 888899999 6889999999999999999999999999987665532 222222222233 37999987 89999999
Q ss_pred EeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 265 VTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
++++ ++++.+... ...+++.+++.|.++.++++.... +..++.++.....++.+.+.+.+++.+. . .+
T Consensus 263 ~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~ 332 (396)
T PRK02627 263 LAKE--------KVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIK-E-VR 332 (396)
T ss_pred EEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCee-e-ec
Confidence 9875 566666543 233567788999998888875322 2233333333333333443333343332 1 23
Q ss_pred CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
..|.++|++++. +..+++.++++ +||.+.|+. .+++|+++ ..+++++++++++|+++++++
T Consensus 333 ~~g~~~~i~~~~-------~~~~~~~~l~~-~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 333 GLGLMIGIELDR-------PAAEIVKKALE-KGLLINVTG----DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred cCcEEEEEEecC-------cHHHHHHHHHH-CCeEEeecC----CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 457888988742 46778888765 499999864 47899987 568999999999999998765
No 121
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=2.7e-30 Score=246.08 Aligned_cols=334 Identities=17% Similarity=0.144 Sum_probs=229.7
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.|+++|||+.|++ +.++++|.+++++.+++.... ...|....|...+++.+++.+.+.++ .+ +.+++++++
T Consensus 37 ~g~~~id~~~~~~---~g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~~---~~-~~i~~~~g~ 109 (385)
T PRK05958 37 DGRRMLNFASNDY---LGLARHPRLIAAAQQAARRYGAGSGGSRLVTGNSPAHEALEEELAEWFG---AE-RALLFSSGY 109 (385)
T ss_pred CCceEEEeeCCCc---ccCCCCHHHHHHHHHHHHhcCCCCCCcCcccCCcHHHHHHHHHHHHHhC---CC-cEEEECcHH
Confidence 6899999999963 234567899999999886421 11233333444444444444444444 23 444445556
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC---ccEEEEeCCCCccc
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGNPCG 194 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG 194 (419)
+++..++..++++||.|++++|+|+.+...+...|.++..++. .|++.+++.+++. +.++++.+++||||
T Consensus 110 ~~~~~~l~~~~~~gd~V~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G 182 (385)
T PRK05958 110 AANLAVLTALAGKGDLIVSDKLNHASLIDGARLSRARVRRYPH-------NDVDALEALLAKWRAGRALIVTESVFSMDG 182 (385)
T ss_pred HHHHHHHHHhCCCCCEEEEeCccCHHHHHHHHhcCCceEEeCC-------CCHHHHHHHHHhccCCCeEEEEEecccCCC
Confidence 6777777888999999999999999988888888888877653 3778888887642 34445556789999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEcccccccccC--CCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG--SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI 272 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 272 (419)
...+ +++|.++|+++|+++|+||+|+.+.++ +........+...++++++.|+||.++.+| ||++++.
T Consensus 183 ~~~~---l~~i~~ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~~~G---g~~~~~~---- 252 (385)
T PRK05958 183 DLAP---LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSG---AAVLGSE---- 252 (385)
T ss_pred CcCC---HHHHHHHHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcccCC---cEEEcCH----
Confidence 9888 899999999999999999999865543 222211112333456899999999987777 8988754
Q ss_pred cchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE
Q 014769 273 FQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTM 349 (419)
Q Consensus 273 ~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~ 349 (419)
++.+.+.... . .+.+.++....++..+++.... ..+..+++.++++.+.+.|+++ ++. +..|. |.+++
T Consensus 253 ----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~~~--~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-~~~~~ 323 (385)
T PRK05958 253 ----TLIDYLINRARPFIFTTALPPAQAAAARAALRILRR--EPERRERLAALIARLRAGLRAL-GFQ-LMDSQ-SAIQP 323 (385)
T ss_pred ----HHHHHHHHhCccceecCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-cCCCC-CCEEE
Confidence 4666654332 1 1233455555555566654211 1456788889999999999887 666 43454 45667
Q ss_pred eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
+.++.. .++.++..+| .++||.+.++..+. ..+++|++++ .+++++++++++|++++
T Consensus 324 ~~~~~~-----~~~~~~~~~l-~~~gI~v~~~~~~~~~~~~~~lRis~~~~~~~~~i~~~l~~l~~~~ 385 (385)
T PRK05958 324 LIVGDN-----ERALALAAAL-QEQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEAL 385 (385)
T ss_pred EEeCCH-----HHHHHHHHHH-HHCCceEecccCCCCCCCCceEEEEecCCCCHHHHHHHHHHHHhcC
Confidence 777531 1356777777 56799998865443 2468999996 58999999999998753
No 122
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=100.00 E-value=8.6e-30 Score=243.67 Aligned_cols=334 Identities=15% Similarity=0.180 Sum_probs=240.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC----CC----CCCCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC----YA----TNSGIPPARRAIADYLSRDLPYKLS-ADDVY 111 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~----Y~----~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~ 111 (419)
+.+++-|+.|..+ ++++.+.+++.+.+.....+. +. ...++.++|+.+++++ +.+ +++|+
T Consensus 16 ~~~~~yld~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------~~~~~~~v~ 84 (403)
T TIGR01979 16 GKPLVYLDSAATS-----QKPQQVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFI------NAASDEEIV 84 (403)
T ss_pred CCceEEEeCcccc-----CCCHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CcCCCCeEE
Confidence 6678999999743 456788888887765421110 10 0124568889999988 455 67999
Q ss_pred EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
+|+|++++++.++.++ .++||+|+++++.|++. ...+...|.+++.++++ .++.++++.+++++++++++
T Consensus 85 ~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~--~~~~~~~~~l~~~i~~~~~l 162 (403)
T TIGR01979 85 FTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD--DDGTLDLDDLEKLLTEKTKL 162 (403)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC--CCCCCCHHHHHHHhccCCeE
Confidence 9999999999998875 56899999999988763 34556779999988875 34568999999999888999
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
+++++|+||||..+| +++|.++|+++|+++++|++|+... ....+..++ ..+++.|++|.++.+| +|+
T Consensus 163 v~~~~~~~~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~gp~G--~g~ 230 (403)
T TIGR01979 163 VAITHVSNVLGTVNP---VEEIAKLAHQVGAKVLVDGAQAVPH----MPVDVQALD---CDFYVFSGHKMYGPTG--IGV 230 (403)
T ss_pred EEEEcccccccccCC---HHHHHHHHHHcCCEEEEEchhhcCc----cccCccccC---CCEEEEecccccCCCC--ceE
Confidence 999999999999999 8899999999999999999997532 222232332 3488889999876566 899
Q ss_pred EEeeCCCCccchhhHHHHHHhh---------------------h-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDC---------------------L-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~---------------------~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
+++++ ++++.+... . ...++++.....++.++++.......++..++..+
T Consensus 231 l~~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 231 LYGKE--------ELLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred EEEch--------HHHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 98864 233333211 0 01134556666666666654323346677788888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC--------CCCCCe
Q 014769 322 SAEICYDGVKEIPCISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY--------VGLKNW 389 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~~~~~ 389 (419)
.++.+.+.|+++++++++ .|. .+.++.+.++. .+..++.. .|+++||.+.+|.. ++.+++
T Consensus 303 l~~~l~~~l~~~~g~~~~-~~~~~~~~~~~v~~~~~~------~~~~~~~~-~L~~~gI~v~~g~~~~~~~~~~~~~~~~ 374 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIY-GPRDAEDRGGIISFNVEG------VHPHDVGT-ILDEEGIAVRSGHHCAQPLMRRFGVPAT 374 (403)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCCccccCceEEEEeCC------cCHHHHHH-HHhhCCEEEcchhhhhHHHHHHhCCCCE
Confidence 999999999888787743 333 13344455653 13455654 55788999988763 344689
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 390 LRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+|+|++ .+++|++++++.|+++++.+
T Consensus 375 iRiS~~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 375 CRASFYIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred EEEEeccCCCHHHHHHHHHHHHHHHHHh
Confidence 999996 58899999999999877654
No 123
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=100.00 E-value=1e-29 Score=242.99 Aligned_cols=330 Identities=14% Similarity=0.160 Sum_probs=238.9
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--------CCCCHHHHHHHHHHHHhhCCCCC-CCCcEEE
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--------NSGIPPARRAIADYLSRDLPYKL-SADDVYV 112 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--------~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~ 112 (419)
.++|-|..+.. .+.++.+++++.+.+.....+.... ..-..++|+.+++++ +. ++++|++
T Consensus 22 ~~~iYld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~~ 90 (406)
T PRK09295 22 LPLAYLDSAAS-----AQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFI------NARSAEELVF 90 (406)
T ss_pred CceEEEeCccc-----ccCCHHHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHc------CcCCCCeEEE
Confidence 35788888863 3567888899888775321111110 122457888888887 43 5789999
Q ss_pred cccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 113 TLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 113 t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
|+|++++++.++.++ .++||+|++++++|++ +...++..|++++.+++++ ++.+|++.++++++++++++
T Consensus 91 t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~i~~~t~lv 168 (406)
T PRK09295 91 VRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPALFDERTRLL 168 (406)
T ss_pred eCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCCCHHHHHHhcCCCcEEE
Confidence 999999999998874 5789999999998864 3455677899999988753 45689999999998889999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
++++|+||||.++| +++|.++|+++|+++++|++|+... ...++..++. .+++.|++|.++.+| +||+
T Consensus 169 ~l~~~~n~tG~~~~---~~~i~~~~~~~~~~vivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l 236 (406)
T PRK09295 169 AITHVSNVLGTENP---LAEMIALAHQHGAKVLVDGAQAVMH----HPVDVQALDC---DFYVFSGHKLYGPTG--IGIL 236 (406)
T ss_pred EEecchhcccccCC---HHHHHHHHHHcCCEEEEEcccccCc----cccCchhcCC---CEEEeehhhccCCCC--cEEE
Confidence 99999999999999 8889999999999999999997632 2223333333 388889999876666 8999
Q ss_pred EeeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 265 VTNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
++++. +.+.+... ....++++.....++.++++.......++..++.++
T Consensus 237 ~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 308 (406)
T PRK09295 237 YVKEA--------LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQN 308 (406)
T ss_pred EEchH--------hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 88652 22222100 011346777777777777766433456677788888
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEE
Q 014769 322 SAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLR 391 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~R 391 (419)
..+++.+.|++++++.++ .|. .+ .+.+.++. .+..++... |.++||.+..|..+. .++++|
T Consensus 309 l~~~l~~~l~~~~~~~~~-~~~~~~~-iv~~~~~~------~~~~~~~~~-L~~~gI~v~~g~~c~~~~~~~~~~~~~iR 379 (406)
T PRK09295 309 LMHYALSQLESVPDLTLY-GPQNRLG-VIAFNLGK------HHAYDVGSF-LDNYGIAVRTGHHCAMPLMAYYNVPAMCR 379 (406)
T ss_pred HHHHHHHHHhcCCCEEEe-CCCCCce-EEEEEECC------cCHHHHHHH-HHhCCeEEeccccchHHHHHHHCCCCEEE
Confidence 999999999888777744 332 34 33444542 145566554 478899999887543 356899
Q ss_pred EEee--cCHHHHHHHHHHHHHHHH
Q 014769 392 IAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 392 is~~--~~~~~l~~~l~~l~~~~~ 413 (419)
+|++ .+++|++.+++.|+++..
T Consensus 380 iS~~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 380 ASLAMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred EEccCCCCHHHHHHHHHHHHHHHH
Confidence 9995 688999999999988753
No 124
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.98 E-value=1e-29 Score=244.26 Aligned_cols=337 Identities=14% Similarity=0.175 Sum_probs=242.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-----CCCC---CCCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-----CYAT---NSGIPPARRAIADYLSRDLPYKLS-ADDVY 111 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~ 111 (419)
+.+++-|..+.++ ++++.+++++.+.+.....+ .|.. ...+.++|+.+++++ +.+ +++|+
T Consensus 30 ~~~~iyLd~a~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------~~~~~~~v~ 98 (424)
T PLN02855 30 GSKLVYLDNAATS-----QKPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFI------NASTSREIV 98 (424)
T ss_pred CCCeEEeeCcccc-----CCCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHc------CCCCCCEEE
Confidence 4568999998743 56788889888876532111 1111 122468889999988 443 57999
Q ss_pred EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
+|+|++++++.++.++ .++||+|+++++.|++ +...++..|.+++.++++++ ..++++.+++.+++++++
T Consensus 99 ~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~~~--~~~~~~~l~~~i~~~t~l 176 (424)
T PLN02855 99 FTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLTPD--EVLDVEQLKELLSEKTKL 176 (424)
T ss_pred EeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecCCC--CCcCHHHHHHHhccCceE
Confidence 9999999999998863 5789999999998875 34456778999999887543 358999999999888999
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
|++++|+||||.++| +++|.++|+++|+++++|++|+. +.....+..++. .+++.|++|.++.+| +||
T Consensus 177 v~i~~~~n~tG~~~~---~~~I~~l~~~~g~~vivD~a~~~----g~~~~~~~~~~~---d~~~~s~~K~~gp~G--~G~ 244 (424)
T PLN02855 177 VATHHVSNVLGSILP---VEDIVHWAHAVGAKVLVDACQSV----PHMPVDVQTLGA---DFLVASSHKMCGPTG--IGF 244 (424)
T ss_pred EEEeCccccccccCC---HHHHHHHHHHcCCEEEEEhhhhc----CCcCCCchhcCC---CEEEeecccccCCCc--cEE
Confidence 999999999999999 78899999999999999999964 222223333332 377999999765555 899
Q ss_pred EEeeCCCCccchhhHHHHHHhh----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDC----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
+++++. +++.+... ....++++.....++..+++.......++..++.++
T Consensus 245 l~~~~~--------~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~ 316 (424)
T PLN02855 245 LWGKSD--------LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEVE 316 (424)
T ss_pred EEEchh--------hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 998752 33332211 001234566666677777765434567788888999
Q ss_pred HHHHHHHHhhcCCCCCCCCCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCC
Q 014769 322 SAEICYDGVKEIPCISCPNKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKN 388 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~ 388 (419)
.++.+++.|++++++.++... ..+.++.+.++.. +..++...|.+++||.+..|..+ +.++
T Consensus 317 l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~------~~~~v~~~L~~~~gI~v~~g~~c~~~~~~~~g~~~ 390 (424)
T PLN02855 317 LGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGI------HPTDLSTFLDQQHGVAIRSGHHCAQPLHRYLGVNA 390 (424)
T ss_pred HHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCc------CHHHHHHHhcccCCEEEechhhhhHHHHHHhCCCC
Confidence 999999999888787744221 1234555666531 35667767655559999987743 3357
Q ss_pred eEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 389 WLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 389 ~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++|+|++ .+++|++.+++.|++++.+++
T Consensus 391 ~iRiS~~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 391 SARASLYFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred eEEEEeccCCCHHHHHHHHHHHHHHHHHHH
Confidence 8999995 689999999999999998764
No 125
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.98 E-value=8.3e-30 Score=239.88 Aligned_cols=320 Identities=17% Similarity=0.138 Sum_probs=227.6
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVL 135 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vl 135 (419)
.+.++.+.+++.+.+.. ..|... .-..++++.+++++ ++++ +.+++++|+++++..++.+++.+||+|+
T Consensus 8 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl 78 (356)
T cd06451 8 SNVPPRVLKAMNRPMLG---HRSPEFLALMDEILEGLRYVF------QTENGLTFLLSGSGTGAMEAALSNLLEPGDKVL 78 (356)
T ss_pred cCCCHHHHHHhCCCccC---CCCHHHHHHHHHHHHHHHHHh------cCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEE
Confidence 45678888887543321 123221 11345666666666 4434 4578899999999999999999999999
Q ss_pred eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
++.++|++ +...++..|.+++.++.++ ++.+|++.+++.+++ +++++++++|+||||.+.| +++|.++|+++
T Consensus 79 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~---~~~i~~~a~~~ 153 (356)
T cd06451 79 VGVNGVFGDRWADMAERYGADVDVVEKPW--GEAVSPEEIAEALEQHDIKAVTLTHNETSTGVLNP---LEGIGALAKKH 153 (356)
T ss_pred EecCCchhHHHHHHHHHhCCCeEEeecCC--CCCCCHHHHHHHHhccCCCEEEEeccCCCcccccC---HHHHHHHHHhc
Confidence 99988875 4567788899999988754 357899999999987 8899999999999999999 77889999999
Q ss_pred CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh---hh---
Q 014769 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD---CL--- 286 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~---~~--- 286 (419)
|+++++|++|+. |....++..++. .+++.|++|+++.| .++||++.++ ++++.+.. ..
T Consensus 154 ~~~li~D~~~~~----g~~~~~~~~~~~---d~~~~s~~K~l~~p-~g~G~l~~~~--------~~~~~~~~~~~~~~~~ 217 (356)
T cd06451 154 DALLIVDAVSSL----GGEPFRMDEWGV---DVAYTGSQKALGAP-PGLGPIAFSE--------RALERIKKKTKPKGFY 217 (356)
T ss_pred CCEEEEeeehhc----cCccccccccCc---cEEEecCchhccCC-CCcceeEECH--------HHHHHHHhcCCCCcee
Confidence 999999999874 212222222222 26677899997654 3589999865 34444432 00
Q ss_pred --------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEe
Q 014769 287 --------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMV 350 (419)
Q Consensus 287 --------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~ 350 (419)
...++++...+.++.++++.......++..++.+++++.+.+.|.++ +++....+. .+.++|+
T Consensus 218 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~ 296 (356)
T cd06451 218 FDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEAL-GLKLLAKPELRSPTVTAV 296 (356)
T ss_pred ecHHHHHhhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCCceEEE
Confidence 11234455556666666655434556777888889999999999887 666332222 3455667
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~ 413 (419)
.++.. .+..+++..|.+++||.+.+|..+..++++|++++ .++++++++++.|+++++
T Consensus 297 ~~~~~-----~~~~~~~~~L~~~~gI~~~~g~~~~~~~~iRis~~~~~~~e~v~~~~~~l~~~~~ 356 (356)
T cd06451 297 LVPEG-----VDGDEVVRRLMKRYNIEIAGGLGPTAGKVFRIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred ECCCC-----CCHHHHHHHHHHhCCEEEecccccccCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 66532 24677777775545999999886655679999995 579999999999998763
No 126
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.98 E-value=1.3e-29 Score=242.40 Aligned_cols=333 Identities=16% Similarity=0.157 Sum_probs=229.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++++|+..+. ..+..+|.+++++.+++..... ..|+......+|++.+++++ +. ++.|++++
T Consensus 45 ~~~~~~~~sn~y---l~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~------g~-~~~i~~~s 114 (410)
T PRK13392 45 PRRVTIWCSNDY---LGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLH------GK-ESALLFTS 114 (410)
T ss_pred CceEEEEECCCc---cCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHh------CC-CCEEEECc
Confidence 456888888763 3567789999999988764321 12333324578889999887 32 45566666
Q ss_pred cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh----cCCccEEEEeC
Q 014769 115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA----DKNTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~v~i~~ 188 (419)
| ++++..++..+.. +||.|+++.+.|..+...+...|.++..++. + |.+.+++.+ .+++++|++++
T Consensus 115 G-~~a~~~~i~~l~~~~~g~~vi~~~~~h~s~~~~~~~~g~~~~~~~~---~----d~~~l~~~l~~~~~~~t~~v~i~~ 186 (410)
T PRK13392 115 G-YVSNDAALSTLGKLLPGCVILSDALNHASMIEGIRRSGAEKQVFRH---N----DLADLEEQLASVDPDRPKLIAFES 186 (410)
T ss_pred H-HHHHHHHHHHHhcCCCCCEEEEehhhhHHHHHHHHHcCCeEEEEeC---C----CHHHHHHHHHhccCCCCEEEEEeC
Confidence 5 5677777776653 7898888777777776777778888766542 1 333343333 24678999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
|+||||.+.+ +++|.++|+++++++|+||+|+...++..+.......+..++ .++++||||.|+++| ||++++
T Consensus 187 ~~n~tG~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G---G~~~~~ 260 (410)
T PRK13392 187 VYSMDGDIAP---IEAICDLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCLG---GYIAAS 260 (410)
T ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhccc---chhhcC
Confidence 9999999999 889999999999999999999955443222111111111112 378899999999888 999875
Q ss_pred CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.++.... ++...+++.+.++.++|+.. +.....+++++++++++.+.|+++ |+. +..+.+
T Consensus 261 ~--------~~~~~l~~~~~~~~~s~~~~~~~~~a~~aaL~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 328 (410)
T PRK13392 261 A--------DLIDFVRSFAPGFIFTTALPPAVAAGATAAIRHL--KTSQTERDAHQDRVAALKAKLNAN-GIP-VMPSPS 328 (410)
T ss_pred H--------HHHHHHHHhCcchhccCcCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCCC
Confidence 4 57777765542 23345556777777777652 223345577888999999999887 777 434444
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+ ++.+.++.. .+..++..+|++++||.+.++..+.. ..++|+++ ..++++++.+++.|++++++.
T Consensus 329 ~-~~~i~~~~~-----~~~~~~~~~L~~~~GI~v~~~~~p~~~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~~ 398 (410)
T PRK13392 329 H-IVPVMVGDP-----TLCKAISDRLMSEHGIYIQPINYPTVPRGTERLRITPTPLHDDEDIDALVAALVAIWDRL 398 (410)
T ss_pred C-EEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeeCCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHc
Confidence 4 444444321 12457777887778999998765433 36899999 368999999999999987653
No 127
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.97 E-value=2.3e-30 Score=214.85 Aligned_cols=332 Identities=19% Similarity=0.261 Sum_probs=249.8
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.|++++.+.-.... ..|.|.. +.- -..|+++. ..+++.+++.- -++++++|.+..|+.|.
T Consensus 39 ~G~~iv~ld~~e~~---ryPdP~q--------~ef--k~~~~d~r-nk~ls~a~~~d------kpLt~dnic~GvGsDE~ 98 (375)
T KOG0633|consen 39 LGRDIVKLDANENP---RYPDPEQ--------MEF--KYVYPDPR-NKRLSDALAQD------KPLTSDNICVGVGSDEL 98 (375)
T ss_pred cCCCceEeccccCC---CCcCHHH--------ccc--ccccCCcc-cchhhhhcccC------CCCCccceEEecCcHHH
Confidence 47777777766533 2333322 110 11355432 34555555543 27899999999999999
Q ss_pred HHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccC
Q 014769 120 VEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNV 196 (419)
Q Consensus 120 l~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~ 196 (419)
+..+++..+.|| ++|+.-.|+|..|...+...+++++.+++.+ ++.++.|++...++. ..+++++++|+||||..
T Consensus 99 ID~iiR~~c~PGkeKIl~cPPtysMY~v~A~iNd~eVvkvpl~p--dF~lnvdai~evl~~ds~iK~~F~tSPgNPtg~~ 176 (375)
T KOG0633|consen 99 IDLIIRCVCDPGKEKILDCPPTYSMYVVDAAINDAEVVKVPLNP--DFSLNVDAIAEVLELDSKIKCIFLTSPGNPTGSI 176 (375)
T ss_pred HHHHHhheecCCccceeecCCcceeEEEEeecCCceEEEecCCC--CccccHHHHHHHHhccccceEEEEcCCCCCCccc
Confidence 999999999999 9999999999999888888999999999866 678999999887754 57889999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+..+++.+|.+.=. |.++++||+|-+|.-.+. .+.-....++++++.+|||.||++|+|+||...+.
T Consensus 177 ik~~di~KiLe~p~--nglVVvDEAYidFsg~~S---~~~lV~kYpNLivlqTlSKsfGLAGiRvG~~~~~~-------- 243 (375)
T KOG0633|consen 177 IKEDDILKILEMPD--NGLVVVDEAYIDFSGVES---RMKLVKKYPNLIVLQTLSKSFGLAGIRVGYGAFPL-------- 243 (375)
T ss_pred ccHHHHHHHHhCCC--CcEEEEeeeeEeeccccc---cchHhHhCCceeehhhhhhhcCcceeEeecccccH--------
Confidence 99999999987433 789999999999763222 22233455688999999999999999999998865
Q ss_pred hHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 277 GIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 277 ~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
.+++.+..... .+..|.++..++.++++...-.+++..++.+.+.+.++...|.++|++.-+..+..++|+++++....
T Consensus 244 ~ia~iln~~Ka-PYNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiLi~v~~~~ 322 (375)
T KOG0633|consen 244 SIAEILNRAKA-PYNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFILIEVTGGD 322 (375)
T ss_pred HHHHHHHhccC-CccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEEEEEcCCC
Confidence 46666665543 45567777777777887655678888899999999999999999887764446777899999887431
Q ss_pred ccCCCCHHHHHHHHHHhcCeEee-cCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVT-PGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
..-+..+..+++.++||.|+ -|+-.+..+++|++.++++|. +-+++.++++
T Consensus 323 ---n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvGt~Een-tvL~k~~K~~ 374 (375)
T KOG0633|consen 323 ---NGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVGTPEEN-TVLMKCLKQF 374 (375)
T ss_pred ---cHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcCCcccc-hHHHHHHHhh
Confidence 11245566777788999986 444445579999999987644 5566666654
No 128
>PRK10534 L-threonine aldolase; Provisional
Probab=99.97 E-value=6e-30 Score=238.42 Aligned_cols=315 Identities=15% Similarity=0.142 Sum_probs=217.8
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI 123 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~ 123 (419)
+|||+.+.. ..++|.+.+++.+.... ...|++..+..+|+++|++++ +. +.+++++|+++++...
T Consensus 1 ~~~~~~~~~-----~~p~~~~~~a~~~~~~~--~~~Y~~~~~~~~L~~~la~~~------g~--~~~~v~~~g~~a~~~~ 65 (333)
T PRK10534 1 MIDLRSDTV-----TRPSRAMLEAMMAAPVG--DDVYGDDPTVNALQDYAAELS------GK--EAALFLPTGTQANLVA 65 (333)
T ss_pred CcccccccC-----CCCCHHHHHHHHhccCC--CcccCCCHHHHHHHHHHHHHh------CC--CeEEEeCchHHHHHHH
Confidence 477887752 23678888888765433 347876678899999999997 33 4456888888888888
Q ss_pred HHHhcCCCCeEEeeCCCCCC-cHHH-HhhcC-CEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccc
Q 014769 124 LSVLARPGANVLLPRPGWPY-YEGI-AQRKQ-VEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCG 194 (419)
Q Consensus 124 ~~~l~~~gd~vlv~~p~~~~-~~~~-~~~~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG 194 (419)
+.+++.+||.|+++.|+|.. +... ....+ ..++.++++ .++.+|++++++++++ ++++|++++|+ ||
T Consensus 66 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G 141 (333)
T PRK10534 66 LLSHCERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAA--ADGTLPLDKVAAKIKPDDIHFARTRLLSLENTH--NG 141 (333)
T ss_pred HHHhcCCCCeeEEechhhhhHhcCCchHHhcCceEEeecCC--CCCCCCHHHHHHhhcccCcCcccceEEEEecCC--CC
Confidence 88889999999999888752 3221 23333 566666553 4578999999998865 57888998766 59
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE-EEEeeCCCC
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG-WLVTNDPNG 271 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~~~~~ 271 (419)
.+++.+++++|+++|+++++++++||+|.+... .+.. ........+.+ +.||||.|+++ +| |++++.
T Consensus 142 ~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~---~~~~~~~~~~~-~~s~SK~~~~~---~G~~~~~~~--- 211 (333)
T PRK10534 142 KVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCE---LKEITQYCDSF-TICLSKGLGTP---VGSLLVGNR--- 211 (333)
T ss_pred eecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCC---HHHHHhcCCEE-EEEeEcCCCCc---ccceEEcCH---
Confidence 999999999999999999999999999874221 1111 11111111222 23899987654 68 576644
Q ss_pred ccchhhHHHHHHhhhcccc---CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769 272 IFQKSGIIDSIKDCLSIYS---DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 348 (419)
++++.++.....+. ..+.+.+.++...++. . .+..++.++.++++.+.|+++ |+. +..| .++|+
T Consensus 212 -----~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~----~-~~~~~~~~~~r~~l~~~L~~~-g~~-~~~~-~~nfv 278 (333)
T PRK10534 212 -----DYIKRARRWRKMTGGGMRQAGILAAAGLYALKH----N-VARLQEDHDNAAWLAEQLREA-GAD-VMRQ-DTNML 278 (333)
T ss_pred -----HHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHh----h-HHHHHHHHHHHHHHHHHHHhC-CCc-cCCC-CceEE
Confidence 67888876654221 2233445555555542 1 223333455678899999987 777 4345 68999
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~ 413 (419)
|++++. .+..++ .++++++||.+.|+. ++|++.+ .+++++++++++|++++.
T Consensus 279 ~~~~~~------~~~~~~-~~~l~~~gi~v~~~~------~~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 279 FVRVGE------EQAAAL-GEYMRERNVLINASP------IVRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred EEECCc------hhHHHH-HHHHHHcCeeecCCc------eEEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 999863 134455 456688899998873 5788774 689999999999997764
No 129
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.97 E-value=3.2e-29 Score=237.92 Aligned_cols=334 Identities=13% Similarity=0.110 Sum_probs=228.4
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
.+|..+|||..|.+..... +.+|.+.+++.+++.... ...|++ .-..++++.+++++ | .+++++++|+
T Consensus 24 ~~g~~~id~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----g----~~~~~~~~sg 93 (379)
T TIGR00707 24 VNGKEYLDFVAGIAVNSLG-HAHPKLVEALKEQLEKLVHVSNLYYT-EPQEELAEKLVEHS----G----ADRVFFCNSG 93 (379)
T ss_pred CCCCEEEEcCcchhhccCC-CCCHHHHHHHHHHHhhccccccccCC-HHHHHHHHHHHhhC----C----CCEEEEeCCc
Confidence 3588899999985433222 356899999999887532 123432 22345555555554 3 2499999999
Q ss_pred HHHHHHHHHHhc---C----CCCeEEeeCCCCCCcHHHHhhcCCEEEE----EeccCCCCccc--ChHHHHHhhcCCccE
Q 014769 117 KQAVEVILSVLA---R----PGANVLLPRPGWPYYEGIAQRKQVEVRH----FDLLPERNWEV--DLDAVEALADKNTAA 183 (419)
Q Consensus 117 ~~al~~~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~~g~~~~~----~~~~~~~~~~~--~~~~l~~~~~~~~~~ 183 (419)
++++..+++++. . ++|+|++++|+|+++...+...+..... .++..+..+.. |++.+++.+.+++++
T Consensus 94 ~~a~~~a~~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ 173 (379)
T TIGR00707 94 AEANEAALKLARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAA 173 (379)
T ss_pred HHHHHHHHHHHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeE
Confidence 999999988663 2 3799999999999877666555443221 12211111111 789999988777888
Q ss_pred EEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE
Q 014769 184 MVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG 262 (419)
Q Consensus 184 v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 262 (419)
++++.++||+|.. ++.+++++|.++|+++++++|+||+|.++.+.+... ++...+...+++ +|||.++ +|+|+|
T Consensus 174 v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~~-~G~riG 248 (379)
T TIGR00707 174 VIVEPIQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFF-AYEHYGIEPDII---TLAKGLG-GGVPIG 248 (379)
T ss_pred EEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh-hHHhcCCCCCEE---EEccccc-CCcccE
Confidence 8886667777764 799999999999999999999999999876654321 211222222333 6899987 999999
Q ss_pred EEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-C--CCCC
Q 014769 263 WLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI-P--CISC 338 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~ 338 (419)
|+++++ ++++.++... ...++.+++.|.++.++|+... -.+..++++++++.+++.|+++ . ++.
T Consensus 249 ~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~- 316 (379)
T TIGR00707 249 ATLAKE--------EVAEAFTPGDHGSTFGGNPLACAAALAVLEVIE---KERLLENVKEKGDYFKERLEELGKNYPNK- 316 (379)
T ss_pred EEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHH---hhhHHHHHHHHHHHHHHHHHHHHhhCCCC-
Confidence 999865 5777776542 3345678889999888886421 1234556666667777666553 1 221
Q ss_pred CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 339 PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 339 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
. .+..|.++|+.++. +..++...| .++||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 317 ~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~v~~~~----~~~lRi~~~~~~t~~~i~~~~~~l~~~~ 379 (379)
T TIGR00707 317 E-VRGKGLMLGIELEA-------PCKDIVKKA-LEKGLLVNCAG----PKVLRFLPPLIITKEEIDEAVSALEEAI 379 (379)
T ss_pred c-cccCceEEEEEecC-------cHHHHHHHH-HHCCcEEeeCC----CCEEEEECCCcCCHHHHHHHHHHHHHhC
Confidence 1 23467888888763 356666665 67899999853 47899997 368999999999998763
No 130
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.97 E-value=5.8e-29 Score=236.39 Aligned_cols=340 Identities=13% Similarity=0.101 Sum_probs=226.4
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|........ -+|.+.+++.+++..... .+. ....+....+++.+.+.. ..+++++++|++
T Consensus 27 d~dG~~~lD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~~~~sGs 98 (389)
T PRK01278 27 DEDGERYLDFASGIAVNSLGH-AHPHLVEALKEQAEKLWH--VSN-LYRIPEQERLAERLVENS----FADKVFFTNSGA 98 (389)
T ss_pred ECCCCEEEECCccHhhccCCC-CCHHHHHHHHHHHHhcCc--ccc-ccCChHHHHHHHHHHhhC----CCCEEEEcCCcH
Confidence 345889999998743332222 679999999999875321 111 112233444555554322 246899999999
Q ss_pred HHHHHHHHHh----cCCCC----eEEeeCCCCCCcHHHHhhcCCEEEEEec-cC-CCCcc----cChHHHHHhhcCCccE
Q 014769 118 QAVEVILSVL----ARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDL-LP-ERNWE----VDLDAVEALADKNTAA 183 (419)
Q Consensus 118 ~al~~~~~~l----~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~-~~-~~~~~----~~~~~l~~~~~~~~~~ 183 (419)
+|++.+++++ ..+|| +|++.+++|+++.......+........ .+ ..++. .|++.+++.+++++++
T Consensus 99 eA~~~al~~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~a 178 (389)
T PRK01278 99 EAVECAIKTARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAA 178 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEE
Confidence 9999998887 34565 8999999999887666555433222110 00 11111 4789999998877777
Q ss_pred EEEeCCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE
Q 014769 184 MVIINPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG 262 (419)
Q Consensus 184 v~i~~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 262 (419)
|++..++||+| .++|.+++++|.++|++||+++|+||+|.++.+.+..+. ....+..+. +.|+||.++ +|+|+|
T Consensus 179 vivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~-~~~~~~~pd---i~t~sK~l~-~G~~ig 253 (389)
T PRK01278 179 ILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFA-HEWAGVTPD---IMAVAKGIG-GGFPLG 253 (389)
T ss_pred EEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccee-ecccCCCCC---EEEEehhcc-CCcceE
Confidence 78777788888 788999999999999999999999999998766654321 112222222 348999975 899999
Q ss_pred EEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch----HHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 263 WLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE----DFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
|+++++ ++++.+.... ..+++.+++.|.++.++|+.... +.+.++.++++++.+.+ .+..+++.
T Consensus 254 ~~~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l---~~~~~~~~ 322 (389)
T PRK01278 254 ACLATE--------EAAKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGL---VDRFPDVI 322 (389)
T ss_pred EEEEcH--------HHHhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHH---HhhCCCce
Confidence 999975 4666665443 33556788889888777764321 12222223333332222 22233222
Q ss_pred CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~ 414 (419)
.. ....|.++++.++. +..++..+++++ ||.+.|+. .+++|+++ ..+++++++++++|++++++
T Consensus 323 ~~-v~g~G~~~~i~~~~-------~~~~~~~~l~~~-GV~~~p~~----~~~lR~~p~~~~~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 323 EE-VRGKGLLLGLKCVV-------PNRDLVQALRDE-GLLTVGAG----DNVVRLLPPLIITEEEIDEALERLERAAES 388 (389)
T ss_pred ee-EecccEEEEEEEec-------CHHHHHHHHHHC-CeEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHh
Confidence 12 23357787877742 467788888665 99999874 57899997 46899999999999998865
No 131
>PLN02483 serine palmitoyltransferase
Probab=99.97 E-value=2e-28 Score=236.71 Aligned_cols=335 Identities=14% Similarity=0.107 Sum_probs=228.2
Q ss_pred CCCeeeccCCCCCCCCCCC-----ChHHHHHHHHHHHhC--CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 41 PRPVVPLGYGDPTAFPCFR-----TAVEAEDAIVDAVRS--GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~-----~~~~v~~a~~~~~~~--~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
+..++||+..+- ..+. ..+.+.+++.+.-.. .....|+...+..++++++|+++ + .++.|+++
T Consensus 99 ~~~~~n~~s~~Y---Lgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~------g-~~~ai~~~ 168 (489)
T PLN02483 99 TRRCLNLGSYNY---LGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEELVARFV------G-KPAAIVFG 168 (489)
T ss_pred CceEEEeecCCc---cCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHh------C-CCcEEEEC
Confidence 567899988863 2333 234455554443111 12234777778899999999998 3 35567776
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-------CC-----c
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-------KN-----T 181 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~-----~ 181 (419)
+| ..++..++.+++++||.|++++|+|.++...++..|++++.++.. |.+.+++.++ ++ .
T Consensus 169 ~G-~~an~~~i~al~~~Gd~Vi~d~~~h~s~~~~~~~~Ga~v~~~~~~-------d~~~le~~l~~~i~~~~p~t~~p~~ 240 (489)
T PLN02483 169 MG-YATNSTIIPALIGKGGLIISDSLNHNSIVNGARGSGATIRVFQHN-------TPSHLEEVLREQIAEGQPRTHRPWK 240 (489)
T ss_pred CH-HHHHHHHHHHhCCCCCEEEEcchhhHHHHHHHHHcCCeEEEEeCC-------CHHHHHHHHHhhhhccccccccCCc
Confidence 65 555557788899999999999999999999999999999988753 3344444332 12 2
Q ss_pred cEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC--CCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 182 AAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG--SIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 182 ~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~--~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
+.++++++ .|++|.+.+ +++|+++|+++++++|+||+|+....+ |.+.......+..+..|+++||||++++.|
T Consensus 241 k~livve~v~s~~G~~~~---l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~~G 317 (489)
T PLN02483 241 KIIVIVEGIYSMEGELCK---LPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGSCG 317 (489)
T ss_pred eEEEEECCCCCCCCcccC---HHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhcccCc
Confidence 45666665 589999988 999999999999999999999854433 222222223333445799999999998877
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcc----cchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEK----TKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~----~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
||++++. ++++.++.... +....+++...++.+.++. ...+...+++++++++++.+++.|+
T Consensus 318 ---G~i~~~~--------~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~ 386 (489)
T PLN02483 318 ---GYIAGSK--------ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQ 386 (489)
T ss_pred ---eEEEcCH--------HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHH
Confidence 9999865 68888876531 1222333333334444431 1123455667889999999999999
Q ss_pred cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLG 406 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~ 406 (419)
++ |+. +..+.++..+++.+... .+..++..+|++ +||.+.|..++.. .+.+|++++ .++++|+++++
T Consensus 387 ~~-G~~-v~~~~~sp~~~l~l~~~-----~~~~~~~~~Ll~-~GI~v~~~~fp~~p~~~~~vRi~isa~~t~edId~~l~ 458 (489)
T PLN02483 387 KM-GFE-VLGDNDSPVMPIMLYNP-----AKIPAFSRECLK-QNVAVVVVGFPATPLLLARARICISASHSREDLIKALE 458 (489)
T ss_pred HC-CCc-ccCCCCCCEEEEEECCH-----HHHHHHHHHHHH-CCcEEeeeCCCCCCCCCceEEEEeCCCCCHHHHHHHHH
Confidence 88 776 43455555666554321 124567777765 6999997333222 368999994 58999999999
Q ss_pred HHHHHHHHH
Q 014769 407 RMKAFCQRH 415 (419)
Q Consensus 407 ~l~~~~~~~ 415 (419)
+|+++++.+
T Consensus 459 ~L~~~~~~~ 467 (489)
T PLN02483 459 VISEVGDLV 467 (489)
T ss_pred HHHHHHHHh
Confidence 999998765
No 132
>PRK07179 hypothetical protein; Provisional
Probab=99.97 E-value=2.8e-28 Score=232.98 Aligned_cols=332 Identities=14% Similarity=0.114 Sum_probs=229.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---C--CCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---K--FNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~--~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
+|..+++|+..+ +.++..+|.+++++.+++... . ...|. ......+|++.+++++ + .+.++++
T Consensus 52 ~g~~~~~~~~~~---YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~------g--~~~~~~~ 120 (407)
T PRK07179 52 PGPDAIILQSND---YLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFT------G--FESCLLC 120 (407)
T ss_pred CCCcEEEeecCC---ccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHh------C--CCcEEEE
Confidence 466778888776 455678899999999988642 1 11121 1123568888888887 3 2567889
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCc
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNP 192 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np 192 (419)
+|+++|+..+++++..+||.|++..+.|......+...|.++..++. .|++.+++++++ ++++|++.+|+||
T Consensus 121 ~sG~~An~~~l~~l~~~g~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~lV~v~~v~n~ 193 (407)
T PRK07179 121 QSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRH-------NDVDHLRRQIERHGPGIIVVDSVYST 193 (407)
T ss_pred CCHHHHHHHHHHHhCCCCCEEEEECCcCHHHHHHHHHCCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 99999999999999999999999999998887777778877665432 488999988875 4677788889999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
||.+.| +++|.++|+++|+++|+||+|+...++..+...+..++.... .+++.|+||.++ .|+||+++++
T Consensus 194 tG~i~p---l~~I~~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g---~~~G~l~~~~--- 264 (407)
T PRK07179 194 TGTIAP---LADIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFA---GRAGIITCPR--- 264 (407)
T ss_pred CCcccc---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhh---ccCeEEEeCH---
Confidence 999999 889999999999999999999865443222211222322122 488889999974 3689999865
Q ss_pred ccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769 272 IFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 348 (419)
++++.+..... ++.+.++....++.++++.. ....+.+++++++++++.+.|+++ ++. +. . .+.++
T Consensus 265 -----~~~~~~~~~~~~~~~~~t~~~~~~aa~~aal~~~--~~~~~~~~~l~~~~~~l~~~L~~~-g~~-v~-~-~~~i~ 333 (407)
T PRK07179 265 -----ELAEYVPFVSYPAIFSSTLLPHEIAGLEATLEVI--ESADDRRARLHANARFLREGLSEL-GYN-IR-S-ESQII 333 (407)
T ss_pred -----HHHHHHHHhCcCeeeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCC-CC-C-CCCEE
Confidence 46566654321 22333333333344444431 223456788999999999999987 776 42 2 35566
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
++.++.. ...+.+...|.++||.+..-.... ..+++||+++ .++++++++++.|++++.+.
T Consensus 334 ~l~~~~~------~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 399 (407)
T PRK07179 334 ALETGSE------RNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSLNADLTASDLDRVLEVCREARDEV 399 (407)
T ss_pred EEEeCCH------HHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhh
Confidence 7766421 123334444577899743211111 2478999995 58999999999999988764
No 133
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.97 E-value=2.2e-28 Score=230.49 Aligned_cols=295 Identities=12% Similarity=0.123 Sum_probs=208.8
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (419)
+.++++.+|+++ +. +.+++++|+++++..++.++.++||.|+++.+.|++....++..|.+++.+++..+.+
T Consensus 53 ~~~~~e~lA~~~------g~--~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~~~~~~~g~~~~~~~~~~~~~ 124 (370)
T TIGR02539 53 IHDFLEDLAEFL------GM--DEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSYVAAERAGLNVKEVPHTGHPE 124 (370)
T ss_pred HHHHHHHHHHHh------CC--CceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHHHHHHHcCCEEEEEecCCccc
Confidence 467788888887 33 4677799999999999999999999999999997766677888999999998765556
Q ss_pred cccChHHHHHhhcC-------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 166 WEVDLDAVEALADK-------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 166 ~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+.+|++.+++.+++ ++++|++++|+||||...+ +++|.++|+++|+++|+|++|+..... ......
T Consensus 125 ~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~---l~~i~~la~~~~~~livDea~~~g~~~----~~~~~~ 197 (370)
T TIGR02539 125 YKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPD---AGKVAKVCREKGVPLLLNCAYTVGRMP----VSAKEI 197 (370)
T ss_pred CCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccC---HHHHHHHHHHcCCeEEEECccccCCcC----CCHHHc
Confidence 78999999998752 5678999999999999988 888999999999999999999973211 111122
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-c--------cCCchHHHHHHHHHHcccch
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-Y--------SDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~--------~~~~~~~~~a~~~~l~~~~~ 309 (419)
+ ..++++|+||+++ +|.|+||+++++ ++++.++..... . .+.....+.++..++... .
T Consensus 198 ~---~di~v~s~sK~~~-~~g~~G~l~~~~--------~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~ 264 (370)
T TIGR02539 198 G---ADFIVGSGHKSMA-ASGPCGVLGMSE--------EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHV-V 264 (370)
T ss_pred C---CCEEEeeCccccc-CCCCEEEEEECH--------HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHH-H
Confidence 2 2367799999986 567899999865 577776654321 0 111112344444444321 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeE-eecCCCC
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWL---LEDINDDIEFALKLAKEESVI-VTPGIYV 384 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~-v~~g~~~ 384 (419)
+++++..+.++. ++++++.|+++ ++..+ ..|..++|++++++... .....+...+...| .++||. +.+
T Consensus 265 ~~l~~~~~~~~~-~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L-~e~GI~~ir~---- 337 (370)
T TIGR02539 265 ERVKRWDEEVKK-TRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEEL-KKRGIHGIRS---- 337 (370)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHH-HhCCCccccC----
Confidence 444444444444 45899999887 66532 24667888888876310 00011223455555 677997 544
Q ss_pred CCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769 385 GLKNWLRIAF-CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 385 ~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.++++|+++ +.++++++++++.|+++++++
T Consensus 338 ~~~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 338 GQTKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred CcceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 3357999997 568999999999999988753
No 134
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.97 E-value=2e-28 Score=233.82 Aligned_cols=325 Identities=15% Similarity=0.147 Sum_probs=225.3
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCC----CHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSG----IPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
++.|..+.++ ++++.+++++.+.+..... ..|....+ ..++|+.+++++ +.++++|++++|+
T Consensus 18 ~~yl~~~~~~-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~------~~~~~~v~~~~~~ 86 (397)
T TIGR01976 18 RVFFDNPAGT-----QIPQSVADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLL------NADPPEVVFGANA 86 (397)
T ss_pred eEEecCCccC-----CCCHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEeCCH
Confidence 6888888643 4678889999888754321 23543333 357778888877 4556689999999
Q ss_pred HHHHHHHHHHh---cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769 117 KQAVEVILSVL---ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 117 ~~al~~~~~~l---~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
++++..++.++ .++||+|++++|.|++.. ..++..|.++..++++++ ++.++++.++++++++++++++++|
T Consensus 87 t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~l~~~i~~~~~lv~i~~~ 165 (397)
T TIGR01976 87 TSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA-TGELHPDDLASLLSPRTRLVAVTAA 165 (397)
T ss_pred HHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc-CCCcCHHHHHHhcCCCceEEEEeCC
Confidence 99998877775 578999999999987643 455778999999887643 3578999999999888999999999
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
+||||.+.+ +++|.++|+++|+++++|+++.. +.....+..++ ..+++.|++|++ |+|+|++++++
T Consensus 166 ~n~tG~~~~---~~~i~~~~~~~~~~~ivD~a~~~----~~~~~~~~~~~---~d~~~~s~~K~~---g~~~G~l~~~~- 231 (397)
T TIGR01976 166 SNTLGSIVD---LAAITELVHAAGALVVVDAVHYA----PHGLIDVQATG---ADFLTCSAYKFF---GPHMGILWGRP- 231 (397)
T ss_pred CCCCCccCC---HHHHHHHHHHcCCEEEEehhhhc----cccCCCHHHcC---CCEEEEechhhc---CCceEEEEEcH-
Confidence 999999998 99999999999999999999853 22222222232 236678999985 45699999865
Q ss_pred CCccchhhHHHHHHhhhc-----------cccCCchHHHHHHHHHHcc---cc-----------hHHHHHHHHHHHHHHH
Q 014769 270 NGIFQKSGIIDSIKDCLS-----------IYSDIPTFIQGAIPQILEK---TK-----------EDFFCKLIDTLRESAE 324 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~-----------~~~~~~~~~~~a~~~~l~~---~~-----------~~~~~~~~~~~~~~~~ 324 (419)
++++.+..... ..++++.....++..+++. .. ..++++..++..+..+
T Consensus 232 -------~~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~ 304 (397)
T TIGR01976 232 -------ELLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAIDAYENRLAE 304 (397)
T ss_pred -------HHHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHHHHHHHHHHH
Confidence 34444432210 0123343333333333332 11 0135666777888889
Q ss_pred HHHHHhhcCCCCCCCCC---CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----------CCCeE
Q 014769 325 ICYDGVKEIPCISCPNK---PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----------LKNWL 390 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~---p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~~~~~ 390 (419)
++.+.|++++++.++.. ...+.++.+.++. .+..++..+| .++||.+..|..+. ..+++
T Consensus 305 ~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~i 377 (397)
T TIGR01976 305 YLLVGLSDLPGVTLYGVARLAARVPTVSFTVHG------LPPQRVVRRL-ADQGIDAWAGHFYAVRLLRRLGLNDEGGVV 377 (397)
T ss_pred HHHHHHhcCCCEEEeCCCCccCCCceEEEEeCC------cCHHHHHHHH-HHCCeEEEeCccchHHHHHHhCCCCCCCeE
Confidence 99999988866764322 1134455555542 1356677666 67799999886553 24689
Q ss_pred EEEee--cCHHHHHHHHHHH
Q 014769 391 RIAFC--AEPSALKDGLGRM 408 (419)
Q Consensus 391 Ris~~--~~~~~l~~~l~~l 408 (419)
|+|+. .++++++.+++.|
T Consensus 378 Ris~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 378 RVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred EEEeeccCCHHHHHHHHHhC
Confidence 99993 6889999998764
No 135
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.97 E-value=4.3e-28 Score=231.90 Aligned_cols=340 Identities=14% Similarity=0.073 Sum_probs=234.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
..+.++|..|. .+++|.+++++.+.+.. .....|....+...+++.+++++.+.+|.. ...|+++
T Consensus 18 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~--~~~v~~~- 88 (402)
T cd00378 18 QRETLELIASE------NFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAE--YANVQPH- 88 (402)
T ss_pred HHhCeeeeccC------CcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCC--ceeeecC-
Confidence 35578887775 24578899998765421 112345556677788887777766656643 4455555
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-----HhhcCCEEEEEeccCC-CCcccChHHHHHhhc-CCccEEEEe
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-----AQRKQVEVRHFDLLPE-RNWEVDLDAVEALAD-KNTAAMVII 187 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-----~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~ 187 (419)
|+++++..++.++.++||+|++++|+|.++... ++..|..+..++++.+ +++.+|++.+++.+. +++++++++
T Consensus 89 sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~id~~~l~~~i~~~~~~~v~~~ 168 (402)
T cd00378 89 SGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKPKLIVAG 168 (402)
T ss_pred CcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCCcCHHHHHHHHHhCCCCEEEec
Confidence 467999999999999999999999999866432 5566777777766543 257899999999885 578888888
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc-cccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY-GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
+|+||+ ..+ +++|.++|+++|+++|+|++| .++.+.+....++. .. .++++|+||++ +|+|.||+++
T Consensus 169 ~~~~~~--~~~---~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~--~~---dv~~~s~sK~l--~G~~gg~i~~ 236 (402)
T cd00378 169 ASAYPR--PID---FKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP--GA---DVVTTTTHKTL--RGPRGGLILT 236 (402)
T ss_pred CcccCC--CcC---HHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc--CC---cEEEeccccCC--CCCCceEEEe
Confidence 888764 445 889999999999999999996 44444442222222 22 26789999984 8899999998
Q ss_pred eCCCCccchhhHHHHHHhhhc-c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 267 NDPNGIFQKSGIIDSIKDCLS-I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+++ ++++.++.... . .+++....+.++..++......+..+.+++++++++.+.+.|+++ ++.++..|.+
T Consensus 237 ~~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~ 308 (402)
T cd00378 237 RKG-------ELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKER-GFKVVSGGTD 308 (402)
T ss_pred ccH-------HHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhC-CCeEeecCCC
Confidence 652 46666655432 1 222222333343444443222356777888999999999999987 7774435678
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC------CCCeEEEEee------cCHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG------LKNWLRIAFC------AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~~Ris~~------~~~~~l~~~l~~l~~~~ 412 (419)
++++|++++... .+...+ .++++++||.+.++..+. ...++|+++. .++++++.+++.|++++
T Consensus 309 ~~~v~v~~~~~~----~~~~~~-~~~l~~~gI~v~~~~~p~~~~~~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~ 383 (402)
T cd00378 309 NHLVLVDLRPKG----ITGKAA-EDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARAL 383 (402)
T ss_pred CeEEEEeCCccC----CCHHHH-HHHHHHcCcEEcCCcCCCCCCCCCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 999999987421 123444 455688999997643222 2468999983 25899999999999987
Q ss_pred HH
Q 014769 413 QR 414 (419)
Q Consensus 413 ~~ 414 (419)
++
T Consensus 384 ~~ 385 (402)
T cd00378 384 KD 385 (402)
T ss_pred hc
Confidence 64
No 136
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.97 E-value=3.7e-28 Score=231.92 Aligned_cols=333 Identities=17% Similarity=0.147 Sum_probs=228.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++++|+..+ +..+..+|.+++++.++++..... .|+......+|++.+++++ + .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~------g--~~~~l~~~ 112 (402)
T TIGR01821 44 AKDVTVWCSND---YLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLH------G--KESALVFT 112 (402)
T ss_pred CeeEEEeEccC---cCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHh------C--CCeEEEEC
Confidence 46789999987 456788999999999998753211 1222223467888888877 2 23566666
Q ss_pred cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---C-CccEEEEeC
Q 014769 115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---K-NTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~v~i~~ 188 (419)
++++++..++..+.. +++.|+.....|......+...|.++..++. .|.+++++.++ + ++++|++++
T Consensus 113 sG~~an~~ai~~l~~~~~~~~v~~~~~~h~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~e~ 185 (402)
T TIGR01821 113 SGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRHSGAEKFIFRH-------NDVAHLEKLLQSVDPNRPKIIAFES 185 (402)
T ss_pred chHHHHHHHHHHhhCCCCCCEEEEcchHhHHHHHHHHHcCCeEEEECC-------CCHHHHHHHHHhccCCCCeEEEEcC
Confidence 678898888888765 6676666655665555666667777655432 25566666554 2 467889999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
|+||+|.+.| +++|.++|+++|+++|+||+|+...++..........+. ....++++||||.++++| ||++++
T Consensus 186 ~~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~i~~~ 259 (402)
T TIGR01821 186 VYSMDGDIAP---IEEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVVG---GYIAAS 259 (402)
T ss_pred CCCCCCCccC---HHHHHHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccCC---ceeecC
Confidence 9999999999 899999999999999999999955443222111111111 123588899999998888 998876
Q ss_pred CCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+ ++++.++... .++.+.++..+.++.++|+..... ....+++.++++++.+.|+++ ++.++ .+.
T Consensus 260 ~--------~~~~~l~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~- 326 (402)
T TIGR01821 260 R--------KLIDAIRSYAPGFIFTTSLPPAIAAGATASIRHLKES--QDLRRAHQENVKRLKNLLEAL-GIPVI-PNP- 326 (402)
T ss_pred H--------HHHHHHHHhCcCceecCcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCC-
Confidence 4 5777776442 223456666777777777653211 444556678888899999887 77633 444
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.++.+.++.. ....++..+|++++||.+.+...+.. ..++|+++ ..++++++++++.|+++++++
T Consensus 327 ~~i~~i~~~~~-----~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 327 SHIVPVIIGDA-----ALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITPTPAHTDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 44555555421 12456777777778999988654433 36899999 468999999999999998764
No 137
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.97 E-value=1e-28 Score=235.55 Aligned_cols=342 Identities=14% Similarity=0.069 Sum_probs=234.0
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
.+|++++||..|.+... ++ .+|.+.+++.++++... ...|.++.+ .++.+.+++++ +. ..++++++++|
T Consensus 40 ~dg~~~lD~~s~~~~~~--lG~~~p~v~~ai~~~~~~~~~~~~~~~~~~~-~~la~~l~~~~----~~-~~~~~v~~~~s 111 (398)
T PRK03244 40 VDGKEYLDLLGGIAVNA--LGHAHPAVVEAVTRQLATLGHVSNLFATEPQ-IALAERLVELL----GA-PEGGRVFFCNS 111 (398)
T ss_pred CCCCEEEECCcCHhhcc--CCCCCHHHHHHHHHHHHhccCccCccCCHHH-HHHHHHHHHhC----CC-CCCCEEEEeCc
Confidence 45889999999865432 33 37999999999987532 234655332 35555555543 31 23579999999
Q ss_pred HHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhc-CCEEEEEeccC--CCCc---ccChHHHHHhhcCCccEEEEeC
Q 014769 116 CKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRK-QVEVRHFDLLP--ERNW---EVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 116 ~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~--~~~~---~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
+++++..+++.+..+| +.|+..+++|+++....... |.........+ .+-. -.|++.+++.+.++++++++..
T Consensus 112 gsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aviiep 191 (398)
T PRK03244 112 GAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDDDTAAVFLEP 191 (398)
T ss_pred hHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCCCCceEeCCCCHHHHHHhhcCCeEEEEEec
Confidence 9999999999876666 57778888998875443322 21111000000 0000 0278889988876778888888
Q ss_pred CCCccccCCCH-HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTY-HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
++||+|.+++. +++++|.++|+++|+++|+||+|.++.+.|..+ .+...+..+++ .+|||.++ +|+|+||++++
T Consensus 192 ~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~pDi---~t~sK~l~-~G~~ig~~~~~ 266 (398)
T PRK03244 192 IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWF-AHQHDGVTPDV---VTLAKGLG-GGLPIGACLAF 266 (398)
T ss_pred ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHH-hhhhhCCCCCE---EEEchhhh-CCcccEEEEEc
Confidence 89999998755 559999999999999999999999876655422 11112222233 37899976 89999999997
Q ss_pred CCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCce
Q 014769 268 DPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGS 345 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g 345 (419)
+ ++++.+... ...+++.+++.+.++.++|+.... .+..++++++.+.+.+.|+++ +...+ .....|
T Consensus 267 ~--------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~---~~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g 334 (398)
T PRK03244 267 G--------PAADLLTPGLHGSTFGGNPVACAAALAVLDTIAS---EGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRG 334 (398)
T ss_pred H--------HHHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHhc-CCCceeeEeecc
Confidence 6 566766543 233567888999999888874221 234566777778888888875 22211 123468
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+++|+.++.. ....+..++ .++||.+.+.. .+++|+++. .++++++++++.|++++++..
T Consensus 335 ~~~~i~~~~~------~~~~~~~~l-~~~Gv~~~~~~----~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 335 LLLGIVLTAP------VAKAVEAAA-REAGFLVNAVA----PDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred EEEEEEEecc------HHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHHHHHHHHHHhcc
Confidence 8999988531 245666666 56799998742 478999983 689999999999999998653
No 138
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.97 E-value=1.2e-28 Score=230.52 Aligned_cols=312 Identities=14% Similarity=0.109 Sum_probs=217.9
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~ 137 (419)
+++++.+++++.+..... ..|.+..+..++++.+++++ + ++++++++|+++++..++.+++++||+|+++
T Consensus 8 ~~~~~~v~~a~~~~~~~~--~~~~~~~~~~~l~~~~a~~~------g--~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~ 77 (338)
T cd06502 8 TGPTPEMLEAMAAANVGD--DVYGEDPTTAKLEARAAELF------G--KEAALFVPSGTAANQLALAAHTQPGGSVICH 77 (338)
T ss_pred CCCCHHHHHHHHhcccCC--cccCCCHHHHHHHHHHHHHh------C--CCeEEEecCchHHHHHHHHHhcCCCCeEEEe
Confidence 567889999998765332 25666667788888888887 3 5678888888999999999999999999999
Q ss_pred CCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-------CccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769 138 RPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-------NTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (419)
Q Consensus 138 ~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~i~~ 207 (419)
.|+|..+.. .....|.+++.++.+ .+.+|++.+++++++ +++++++++|+|| |.+++.+++++|++
T Consensus 78 ~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~ 153 (338)
T cd06502 78 ETAHIYTDEAGAPEFLSGVKLLPVPGE---NGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISA 153 (338)
T ss_pred cCcceeeecCCcHHHHcCceEEeecCC---CCcCCHHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHH
Confidence 999976432 345578888888753 256899999998864 6788999999997 66779999999999
Q ss_pred HHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhHHHHHHhhh
Q 014769 208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGIIDSIKDCL 286 (419)
Q Consensus 208 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~l~~~~ 286 (419)
+|+++|+++|+|++|..+.....+. ++..+....+ +++.|+||+++++| |+++ .++ ++++.++...
T Consensus 154 ~~~~~~~~livDea~~~~~~~~~~~-~~~~~~~~~d-~~~~s~sK~~~~~~---g~~~~~~~--------~~~~~~~~~~ 220 (338)
T cd06502 154 LAKENGLPLHLDGARLANAAAALGV-ALKTYKSGVD-SVSFCLSKGGGAPV---GAVVVGNR--------DFIARARRRR 220 (338)
T ss_pred HHHHcCCeEeechHHHHHHHHhcCC-CHHHHHhcCC-EEEEeccccCCCcc---ceEEECCH--------HHHHHHHHHH
Confidence 9999999999999986432211111 2222211222 45779999998887 5544 432 5677776553
Q ss_pred c---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCH
Q 014769 287 S---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDD 363 (419)
Q Consensus 287 ~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~ 363 (419)
. .+...+.+.+.++...|+.. ...+..+++.++++++.+.|+++ ++. +..+. +.++.++++... ...
T Consensus 221 ~~~~~~~~~~~~~~~a~~~~L~~~---~~~~~~~~~~~~~~~l~~~L~~~-~~~-~~~~~-~~~~~v~~~~~~----~~~ 290 (338)
T cd06502 221 KQAGGGMRQSGFLAAAGLAALEND---LWLRRLRHDHEMARRLAEALEEL-GGL-ESEVQ-TNIVLLDPVEAN----AVF 290 (338)
T ss_pred HHhCCChhhHHHHHHHHHHHhcCc---hHHHHHHHHHHHHHHHHHHHHhc-CCC-ccccc-CCeEEEecCCcc----HHH
Confidence 2 12334566677777777642 23455567778888999999887 454 42444 445566654210 011
Q ss_pred HHHHHHHH--HhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769 364 IEFALKLA--KEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA 410 (419)
Q Consensus 364 ~~~~~~ll--~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 410 (419)
.++..++. .++|+.+.+.. .+++|+++. .++++++++++.+++
T Consensus 291 ~~l~~~l~~~~~~gi~~~~~~----~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 291 VELSKEAIERRGEGVLFYAWG----EGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHHHHHHHhhhCCEEEEecC----CCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 23333332 15799987753 278999995 488999999998864
No 139
>PLN02721 threonine aldolase
Probab=99.97 E-value=2.1e-28 Score=230.28 Aligned_cols=330 Identities=15% Similarity=0.113 Sum_probs=218.0
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
.+++|+.+.+. . +++.+.+++.+........+|++ ...++|+++++++. . +.+++++++++++..
T Consensus 6 ~~~~~~~~~~~----~-~~~~~~~a~~~~~~~~~~~~~~~--~~~~l~~~la~~~~------~--~~~~~~~~Gs~a~~~ 70 (353)
T PLN02721 6 RVVDLRSDTVT----K-PTDAMRAAMANAEVDDDVLGYDP--TALRLEEEMAKIFG------K--EAALFVPSGTMGNLI 70 (353)
T ss_pred hhhhhhccccc----C-CCHHHHHHHHhccCCCcccCCCH--HHHHHHHHHHHHhC------C--ceeEEecCccHHHHH
Confidence 46889999865 2 46788888876411222224443 36899999999983 2 235666666767677
Q ss_pred HHHHhcC-CCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhc-------CCccEEEEeCC-C
Q 014769 123 ILSVLAR-PGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-------KNTAAMVIINP-G 190 (419)
Q Consensus 123 ~~~~l~~-~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p-~ 190 (419)
++.+++. +||.|++++|+|..... .+...|.++..++.+ .++.+|++.++++++ +++++++++++ +
T Consensus 71 ~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~ 148 (353)
T PLN02721 71 SVLVHCDVRGSEVILGDNSHIHLYENGGISTLGGVHPRTVKNN--EDGTMDLDAIEAAIRPKGDDHFPTTRLICLENTHA 148 (353)
T ss_pred HHHHHccCCCCeEEEcCccceehhcccchhhhcCceeEecCCC--cCCCcCHHHHHHHHHhccCCCCCcceEEEEecccc
Confidence 7887777 99999999999865443 567778888888754 345689999999987 57888888775 7
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE-EEeeCC
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW-LVTNDP 269 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~ 269 (419)
||||.++|.+++++|.++|+++|+++|+|++|........+. ........ ...++.|+||+++. ++|+ ++.++
T Consensus 149 np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~-~~~~~~~~-~d~~~~s~sK~l~~---~~G~~~~~~~- 222 (353)
T PLN02721 149 NCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGV-PVHRLVKA-ADSVSVCLSKGLGA---PVGSVIVGSK- 222 (353)
T ss_pred ccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCC-CHHHHhhh-CCEEEEecccccCC---ceeeEEecCH-
Confidence 899999999999999999999999999999986422110011 11111111 11345579999754 3576 44432
Q ss_pred CCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCCCCceEE
Q 014769 270 NGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC-PNKPEGSMV 347 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~p~~g~~ 347 (419)
++++.+...... ..++....+.++..+... .+..++ .++..++++.+.+.|++++++.+ +..|. +.+
T Consensus 223 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--~~~~~~-~~~~~~~~~~l~~~L~~~~~~~~~~~~~~-~~~ 291 (353)
T PLN02721 223 -------SFIRKAKRLRKTLGGGMRQVGVLAAAALVAL--QENVPK-LEDDHKKAKLLAEGLNQIKGLRVNVAAVE-TNI 291 (353)
T ss_pred -------HHHHhHHHHHHhcCCCeehhHHHHHHHHHHH--HHHHHH-HHHHHHHHHHHHHHHHhCCCcEEecCCcc-ceE
Confidence 566665544332 222222222222211111 123333 23345667888999988877742 33444 557
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~ 414 (419)
+|++++... ..+..++..+| .++||.+.|+. ..++|++++ .+++++++++++|++++..
T Consensus 292 ~~~~~~~~~---~~~~~~~~~~L-~~~gi~v~~~~----~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 292 VYFDITDGS---RITAEKLCKSL-EEHGVLLMPGN----SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred EEEEccCCc---cccHHHHHHHH-HhCCcEEecCC----CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 888886410 01456777777 57899999974 568999994 5899999999999988753
No 140
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.97 E-value=6.8e-28 Score=230.58 Aligned_cols=333 Identities=18% Similarity=0.157 Sum_probs=226.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++++|+..| +..+..+|.+.+++.+++..... ..|.+.....+|++.+++++ + .++. ++.+
T Consensus 45 ~~~~~~~~s~d---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~------g-~~~~-~~~~ 113 (407)
T PRK09064 45 EREVTVWCSND---YLGMGQHPKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERELADLH------G-KEAA-LVFT 113 (407)
T ss_pred CceEEEEECCC---CcCCCCCHHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHHHHHHh------C-CCcE-EEEC
Confidence 46789999987 34577889999999998765322 12333334567888888876 2 2344 4445
Q ss_pred cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeC
Q 014769 115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~ 188 (419)
++++++..++..+.. +++.|+.....|......+...+.++..++. .|++.+++.++ +++++|++++
T Consensus 114 sG~~an~~ai~~l~~~~~~~~i~~~~~~h~s~~~~~~~~~~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~ 186 (407)
T PRK09064 114 SGYVSNDATLSTLAKLIPDCVIFSDELNHASMIEGIRRSRCEKHIFRH-------NDVAHLEELLAAADPDRPKLIAFES 186 (407)
T ss_pred cHHHHHHHHHHHHhCCCCCCEEEEeCcchHHHHHHHHHcCCcEEEECC-------CCHHHHHHHHHhccCCCCeEEEEeC
Confidence 556777777777654 6676666666666555666667776655442 25667766654 3567899999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
|+||+|.+.+ +++|.++|+++|+++|+||+|+...++..+.......+. ....++++||||.|+++| ||++++
T Consensus 187 v~s~~G~~~~---l~~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~G---G~~~~~ 260 (407)
T PRK09064 187 VYSMDGDIAP---IAEICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGVMG---GYIAGS 260 (407)
T ss_pred CCCCCccccC---HHHHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhccC---ceEecC
Confidence 9999999998 999999999999999999999854443222111111111 224688999999998888 998875
Q ss_pred CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.++.... ++.+.++..+.++.+.++.... ....+++++++++++.+.|+++ ++. +..+.
T Consensus 261 ~--------~~~~~l~~~~~~~~~t~~~~~~~~~aa~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~- 327 (407)
T PRK09064 261 A--------ALVDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKE--SNEERERHQERAAKLKAALDAA-GIP-VMPNE- 327 (407)
T ss_pred H--------HHHHHHHHhCccccccCcCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCC-CCCCC-
Confidence 4 57777665431 2334556666666666654221 2334677888999999999887 776 32344
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.++++.++.. ....++..+|++++||.+.+...+.. .+++|++++ .++++++++++.|+++++++
T Consensus 328 ~~iv~i~~~~~-----~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~~~~~t~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 328 SHIVPVMVGDP-----EKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITPTPFHTDEMIDHLVEALVEVWARL 398 (407)
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHc
Confidence 45556655421 13467777787778999988665443 268999994 58999999999999998764
No 141
>PRK02948 cysteine desulfurase; Provisional
Probab=99.97 E-value=1.5e-28 Score=233.33 Aligned_cols=334 Identities=12% Similarity=0.063 Sum_probs=231.7
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+-|..+.. .++++.+++++.+.+.....+ .|.. ..-..++|+.+++++ +.++++|++++|++
T Consensus 2 ~yld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~~~g~t 70 (381)
T PRK02948 2 IYLDYAAT-----TPMSKEALQTYQKAASQYFGNESSLHDIGGTASSLLQVCRKTFAEMI------GGEEQGIYFTSGGT 70 (381)
T ss_pred EeccCCCC-----CCCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHH
Confidence 44555542 246788899988877532110 1100 112356777778777 56788999999999
Q ss_pred HHHHHHHHHhc----CCCCeEEeeCCCCCCc---HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCC
Q 014769 118 QAVEVILSVLA----RPGANVLLPRPGWPYY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (419)
Q Consensus 118 ~al~~~~~~l~----~~gd~vlv~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 190 (419)
+++..++.++. ++||.|++..+.|+++ ...++..|.++..+++++ ++.+|++.+++.++++++++++++|+
T Consensus 71 ~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~~~~~~g~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~ 148 (381)
T PRK02948 71 ESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQSLESQGYTVTEIPVDK--SGLIRLVDLERAITPDTVLASIQHAN 148 (381)
T ss_pred HHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHHHHHhCCCEEEEEeeCC--CCCCCHHHHHHhcCCCCEEEEEECCc
Confidence 99999888875 5689999998777654 344566799999888753 35689999999998888999999999
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 270 (419)
||||.++| +++|.++|+++|+++++|+++.... ....+..+ +..+++.|+||.++.+| +|++++++..
T Consensus 149 n~tG~~~~---~~~I~~l~~~~~~~vivD~~~~~g~----~~~~~~~~---~~d~~~~s~~K~~gp~G--~G~l~~~~~~ 216 (381)
T PRK02948 149 SEIGTIQP---IAEIGALLKKYNVLFHSDCVQTFGK----LPIDVFEM---GIDSLSVSAHKIYGPKG--VGAVYINPQV 216 (381)
T ss_pred CCcEeehh---HHHHHHHHHHcCCEEEEEChhhccc----cccCcccC---CCCEEEecHHhcCCCCc--EEEEEEcCCC
Confidence 99999999 7889999999999999998776521 12222223 34478889999988778 8998876531
Q ss_pred CccchhhHHH-HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE---
Q 014769 271 GIFQKSGIID-SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM--- 346 (419)
Q Consensus 271 ~~~~~~~~~~-~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--- 346 (419)
... .... .........++++.+++.++.++++.. .++.++.++++++.++++.+.|+++ ++.+. ......
T Consensus 217 ~~~---~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~-~~~~~~~~~ 290 (381)
T PRK02948 217 RWK---PVFPGTTHEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIE-VEGHSTSCL 290 (381)
T ss_pred CCC---CcccCCCCCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEE-EeCCCccCc
Confidence 110 0000 000001124678888888888888753 2567888899999999999999987 55422 211111
Q ss_pred --EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------------C-----CCeEEEEee--cCHHHHHH
Q 014769 347 --VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------------L-----KNWLRIAFC--AEPSALKD 403 (419)
Q Consensus 347 --~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~-----~~~~Ris~~--~~~~~l~~ 403 (419)
.+.+.++ +. +..++...| .++||.+.+|..+. . .+++|+|++ ++++|++.
T Consensus 291 ~~i~~~~~~-----~~-~~~~~~~~l-~~~gI~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~~~~~t~~di~~ 363 (381)
T PRK02948 291 PHIIGVTIK-----GI-EGQYTMLEC-NRRGIAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDT 363 (381)
T ss_pred CCEEEEEeC-----CC-CHHHHHHhc-ccCCEEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEcCCCCCHHHHHH
Confidence 1112222 11 355666665 67899999887521 1 368999995 68999999
Q ss_pred HHHHHHHHHHHHh
Q 014769 404 GLGRMKAFCQRHT 416 (419)
Q Consensus 404 ~l~~l~~~~~~~~ 416 (419)
+++.|+++++++.
T Consensus 364 l~~~l~~~~~~~~ 376 (381)
T PRK02948 364 TIHALETIGNQFY 376 (381)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987664
No 142
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.97 E-value=8.7e-28 Score=226.14 Aligned_cols=322 Identities=14% Similarity=0.129 Sum_probs=219.0
Q ss_pred CCChHHHHHHHHHHHhCCCC----C---CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC
Q 014769 58 FRTAVEAEDAIVDAVRSGKF----N---CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP 130 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~----~---~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~ 130 (419)
-|..+++.+++.+....... . .+....-+.++++.+++++ ++ +++++++|+++++..++.+++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~--~~i~~~~g~t~al~~~l~~~~~~ 82 (361)
T cd06452 11 GRLTPEARKALIEWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFL------GM--DEARVTPGAREGKFAVMHSLCEK 82 (361)
T ss_pred CCCCHHHHHHHHHHhcccCCccccccccccccCchHHHHHHHHHHHc------CC--ceEEEeCCHHHHHHHHHHHhcCC
Confidence 46778888888776532100 0 1111123568899999987 44 78999999999999999999999
Q ss_pred CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-------CCccEEEEeCCCCccccCCCHHHHH
Q 014769 131 GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-------KNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 131 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-------~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
||+|+++.++|++....+...|++++.++.+.+.++.+|++.++++++ ++++++++++|+||||...+ ++
T Consensus 83 gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~---~~ 159 (361)
T cd06452 83 GDWVVVDGLAHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHD---AK 159 (361)
T ss_pred CCEEEEcCCcchHHHHHHHhcCCEEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeecc---HH
Confidence 999999999988777778889999999988655456899999998875 26789999999999999877 88
Q ss_pred HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283 (419)
Q Consensus 204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~ 283 (419)
+|.++|+++|+++|+|++|+.... ......++ ..+++.|+||.++ ++.|+||+++++ ++++.+.
T Consensus 160 ~i~~~~~~~~~~vivD~a~~~g~~----~~~~~~~~---~d~~~~s~~K~l~-~~~~~G~l~~~~--------~~~~~l~ 223 (361)
T cd06452 160 KIAKVCHEYGVPLLLNGAYTVGRM----PVSGKELG---ADFIVGSGHKSMA-ASAPIGVLATTE--------EWADIVF 223 (361)
T ss_pred HHHHHHHHcCCeEEEECCcccCCc----CCCHHHcC---CCEEEecCCcccc-CCCCeEEEEECH--------HHHHHHh
Confidence 999999999999999999985221 11222232 3488999999976 556999999865 4666665
Q ss_pred hhhcc---------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecC
Q 014769 284 DCLSI---------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLN 353 (419)
Q Consensus 284 ~~~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~ 353 (419)
..... ..+.......++...++.. .+.++. ..+..++++++.+.|++++++.++. .+....++.++.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~-~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~ 301 (361)
T cd06452 224 RTSQMFKIKEVELLGCTLRGAPLVTLMASFPHV-KERVKR-WDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETP 301 (361)
T ss_pred ccccccccceeeeeccccCchHHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcC
Confidence 43311 0111111222333333221 122333 2233445578889999888877331 2344556666654
Q ss_pred cccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHH
Q 014769 354 PWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 354 ~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~ 412 (419)
.... .......++..+| .++||.+. ..+...++|++. +.++++++.+++.|+++.
T Consensus 302 ~~~~~~~~~~~~~~~~~~~L-~~~gI~~~---~~~~~~~~ri~~~g~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 302 SFDEIAKKHKRRGYFLYSEL-KKRGIHGI---KPGLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred CcchhhhhccccchhHHHHH-HHcCceEE---cCCCceEEEEEecCCCHHHHHHHHHHHHHHh
Confidence 1000 0001233577777 55699853 223467899999 668999999999998654
No 143
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.97 E-value=1.2e-27 Score=224.88 Aligned_cols=327 Identities=16% Similarity=0.149 Sum_probs=221.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
++.+|+..+ +...+.+|++.+++.+.+++... ..|.. .....++++.+++++ + . ++.++++++
T Consensus 2 ~~~~~~~~~---~~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~----~--~--~~~iv~~sg 70 (349)
T cd06454 2 KVLNFCSND---YLGLANHPEVIEAAKEALDKYGVGAGGSRLISGTSDLHEELEEELAEFH----G--K--EAALVFSSG 70 (349)
T ss_pred CceecccCC---ccccCCCHHHHHHHHHHHHHhCCCCCCcCeecCCchHHHHHHHHHHHHh----C--C--CCEEEeccH
Confidence 456676664 23345579999999999875321 12222 223356666666665 3 2 245566666
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----CccEEEEeCCCC
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINPGN 191 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~n 191 (419)
++++..++.+++++||.|+++.|+|+.+...+...|.++..++. .|.+.+++.+++ +++++++++|+|
T Consensus 71 ~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~~~~~le~~i~~~~~~~~~~~v~~~~~~~ 143 (349)
T cd06454 71 YAANDGVLSTLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKH-------NDMEDLEKLLREARRPYGKKLIVTEGVYS 143 (349)
T ss_pred HHHHHHHHHHhcCCCCEEEEehhhhHHHHHHHHHcCCceEEecC-------CCHHHHHHHHHHhhccCCCeEEEEecccc
Confidence 78888888888899999999999999888888888988876642 366677776653 456777789999
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 270 (419)
|||...+ +++|.++|+++|+++|+|++|+...+..... .........+.+++++|+||.++.+| ||++.++
T Consensus 144 ~tG~~~~---~~~i~~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g---G~i~~~~-- 215 (349)
T cd06454 144 MDGDIAP---LPELVDLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVG---GYIAGSK-- 215 (349)
T ss_pred CCCCccC---HHHHHHHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcccC---CEEECCH--
Confidence 9999988 8999999999999999999997543321111 00111223345789999999987655 8988754
Q ss_pred CccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769 271 GIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV 347 (419)
Q Consensus 271 ~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~ 347 (419)
++.+.+..... ...+.++..+.++.+.++.... .+..+++++++++.+.+.|.++ ++.++ .+.++++
T Consensus 216 ------~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~l~~~-g~~~~-~~~~~~~ 285 (349)
T cd06454 216 ------ELIDYLRSYARGFIFSTSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRGLKEL-GFPVG-GSPSHII 285 (349)
T ss_pred ------HHHHHHHHhchhhhccCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHhc-CCccc-CCCCCcE
Confidence 46665554321 1234556666666666654222 4566788889999999999887 66633 3434444
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAFC--AEPSALKDGLGRMKAF 411 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~~--~~~~~l~~~l~~l~~~ 411 (419)
.++.++.. .+..++...|++ +||.+.++.... ..+++|+++. .+++++++++++|+++
T Consensus 286 ~~~~~~~~-----~~~~~~~~~L~~-~gI~~~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 286 PPLIGDDP-----AKAVAFSDALLE-RGIYVQAIRYPTVPRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred EEEeCCCh-----HHHHHHHHHHHh-CCceEEEecCCccCCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 44444321 135677777755 499998864321 1479999995 5899999999999864
No 144
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=3e-27 Score=221.32 Aligned_cols=334 Identities=19% Similarity=0.213 Sum_probs=252.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CC--CCCCC----CCCCHHHHHHHHHHHHhhCCCCCC-CCcEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KF--NCYAT----NSGIPPARRAIADYLSRDLPYKLS-ADDVY 111 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~--~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~ 111 (419)
+.+++-|..+..+ +.|..+.+++.+..... .. ..|.. ..-+.+.|+.+++++ +.+ .++|+
T Consensus 20 ~~~~vylD~aa~~-----~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~------~a~~~~eIv 88 (405)
T COG0520 20 GKPLVYLDNAATS-----QKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFL------NADSSDEIV 88 (405)
T ss_pred CCCeEEecCcccc-----cCCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHh------CCCCCCeEE
Confidence 5566777766432 35788889888876421 11 12222 234578899999998 567 48999
Q ss_pred EcccHHHHHHHHHHHh---cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 112 VTLGCKQAVEVILSVL---ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l---~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+|.|+|++++.+..++ ..+||+|++....|++ +....+..|++++.++++ +++.++.+.++..++++|++|
T Consensus 89 ft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~--~~g~~~~~~~~~~i~~~Tklv 166 (405)
T COG0520 89 FTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLD--DDGLLDLDALEKLITPKTKLV 166 (405)
T ss_pred EeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecC--CCCCcCHHHHHHhcCCCceEE
Confidence 9999999999999999 5899999999999875 456667779999999986 455799999999999999999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
.+++.+|.||++.| +++|+++|+++|+++++|.+++. +..+..+..++.+ +++.|.+|++..| ..+|.+
T Consensus 167 ais~vSn~tG~~~p---v~~I~~la~~~ga~v~VDaaq~~----~h~~idv~~l~~D---f~afsgHKwl~gP-~GiGvL 235 (405)
T COG0520 167 ALSHVSNVTGTVNP---VKEIAELAHEHGALVLVDAAQAA----GHLPIDVQELGCD---FLAFSGHKWLLGP-TGIGVL 235 (405)
T ss_pred EEECccccccccch---HHHHHHHHHHcCCEEEEECcccc----CccCCCchhcCCC---EEEEcccccccCC-CceEEE
Confidence 99999999999999 99999999999999999999987 4445556666665 8888999964444 239999
Q ss_pred EeeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 265 VTNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
++++ ++.+.+... ..-.++++.....++.++++.......++..++.++
T Consensus 236 y~r~--------~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~ 307 (405)
T COG0520 236 YVRK--------ELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERE 307 (405)
T ss_pred EEch--------HHHhhcCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHHH
Confidence 9976 344444110 111345666666666777766555667888899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEE
Q 014769 322 SAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLR 391 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~R 391 (419)
..+++.+.|+++|++.+..++. .+-.+.+.++. ....+++..| .++||.++.|..+.. ...+|
T Consensus 308 L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~------~~~~dv~~~L-~~~gI~vr~g~~ca~p~~~~~~~~~~iR 380 (405)
T COG0520 308 LTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKG------IHPHDVATLL-DEKGIAVRAGHHCAQPLHRLLGVDATIR 380 (405)
T ss_pred HHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCC------CCHHHHHHHH-HhCCeEEEeccccccHHHHhcCCCCceE
Confidence 9999999999999988554442 33344455553 2466776665 667899999977643 45599
Q ss_pred EEee--cCHHHHHHHHHHHHHHHH
Q 014769 392 IAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 392 is~~--~~~~~l~~~l~~l~~~~~ 413 (419)
+|++ .++|||+.+++.|+++.+
T Consensus 381 ~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 381 ASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEEeecCCHHHHHHHHHHHHHHhh
Confidence 9995 589999999999998764
No 145
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.97 E-value=1.4e-27 Score=227.05 Aligned_cols=325 Identities=15% Similarity=0.092 Sum_probs=239.3
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
+.++.+++++...+ . .|. ..+..++++.+.+.+.+.+|.. ..+.++++++++++++.++..+.++||+|++.+
T Consensus 19 ~~~~~V~~a~~~~~----~-~~~-~~~~~~~~~~~~~~l~~~~g~~-~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~ 91 (401)
T PLN02409 19 NIPERVLRAMNRPN----E-DHR-SPAFPALTKELLEDVKYIFKTK-SGTPFIFPTTGTGAWESALTNTLSPGDKVVSFR 91 (401)
T ss_pred CCCHHHHHHhcCCC----C-CCC-CHHHHHHHHHHHHHHHHHhCCC-CCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeC
Confidence 46778877765432 2 222 2356788888888888877753 234688899999999999999999999999999
Q ss_pred CCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 139 PGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 139 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
+.|++. ...++..|.+++.++.+.+ ..++++.+++++++ +++++++++++||||.++|.+++.++++ |+++
T Consensus 92 ~~~~~~~~~~~~~~~g~~v~~v~~~~~--~~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~-~~~~ 168 (401)
T PLN02409 92 IGQFSLLWIDQMQRLNFDVDVVESPWG--QGADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLD-CAQH 168 (401)
T ss_pred CCchhHHHHHHHHHcCCceEEEECCCC--CCCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHh-hhcc
Confidence 999765 4667788999999987543 34789999998875 6899999999999999999555555444 9999
Q ss_pred CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------
Q 014769 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC------- 285 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~------- 285 (419)
|+++|+|++++. +..+..+..++. .+++.|.+|++++| .++||+++++ +.++.+...
T Consensus 169 g~~~vvD~v~s~----g~~~id~~~~~~---D~~~~s~~K~l~~P-~G~G~l~~~~--------~~~~~~~~~~~~~~~~ 232 (401)
T PLN02409 169 PALLLVDGVSSI----GALDFRMDEWGV---DVALTGSQKALSLP-TGLGIVCASP--------KALEASKTAKSPRVFF 232 (401)
T ss_pred CcEEEEEccccc----CCccccccccCc---cEEEEcCccccCcC-CCcceeEECH--------HHHHHHhcCCCCCeec
Confidence 999999999885 222222333333 37777889997553 3699999865 344443321
Q ss_pred ----------h-cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-C--ceEEEEe
Q 014769 286 ----------L-SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-E--GSMVTMV 350 (419)
Q Consensus 286 ----------~-~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~--~g~~~~~ 350 (419)
. .. .++++...+.++.++++......+++..++++.+.+.+.+.|+++ +++++... . .+...++
T Consensus 233 ~~~~~~~~~~~g~~~~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~-g~~~~~~~~~~~s~~v~~~ 311 (401)
T PLN02409 233 DWADYLKFYKLGTYWPYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW-GLKLCTKKPEWRSDTVTAV 311 (401)
T ss_pred CHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeeccCChhhcccceEEE
Confidence 0 01 336677778888888876555678888999999999999999887 77744221 1 2234566
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHH
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~ 415 (419)
.++.. .+..++...+++++||.+.+|......+.|||+. + .+.+++..++..|++++.+.
T Consensus 312 ~~p~~-----~~~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~~g~~~~~~~~~~~~~~~~~l~~~ 373 (401)
T PLN02409 312 VVPEG-----IDSAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGHLGNVNELQLLGALAGVEMVLKDV 373 (401)
T ss_pred eCCCC-----CCHHHHHHHHHHhCCEEEEcCCCcccCCEEEEcCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 66532 2567788888889999999887654578999998 4 58899999999999998865
No 146
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=8.5e-28 Score=227.70 Aligned_cols=315 Identities=17% Similarity=0.174 Sum_probs=223.2
Q ss_pred CChHHHHHHHHHHHhCCCCC--CCC----C--CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHHHHHHHHHhcC
Q 014769 59 RTAVEAEDAIVDAVRSGKFN--CYA----T--NSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLAR 129 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~--~Y~----~--~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l~~ 129 (419)
++++.+.+++.+.+.....+ ... + .....++|+.+++++ +.+ +++|++|+|++++++.++.++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~g~t~a~~~~~~~l~~ 83 (373)
T cd06453 10 QKPQPVIDAIVDYYRHYNANVHRGVHELSARATDAYEAAREKVARFI------NAPSPDEIIFTRNTTEAINLVAYGLGR 83 (373)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCCeEEEeCCHHHHHHHHHHHhhh
Confidence 45678888887776432110 000 0 133457888888887 445 67999999999999999999987
Q ss_pred ---CCCeEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769 130 ---PGANVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 130 ---~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 202 (419)
+||+|++++++|++. ...++..|.+++.++.+ .++.+|++.+++.+.++++++++++|+||||.+.| +
T Consensus 84 ~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~---~ 158 (373)
T cd06453 84 ANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVD--DDGQLDLEALEKLLTERTKLVAVTHVSNVLGTINP---V 158 (373)
T ss_pred cCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecC--CCCCcCHHHHHHHhcCCceEEEEeCcccccCCcCC---H
Confidence 899999999999874 33445678999998875 34578999999999888999999999999999999 7
Q ss_pred HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l 282 (419)
++|.++|+++|+++++|++|+.... ...+...+. .+++.|++|.++. .++|++++++ ++++.+
T Consensus 159 ~~i~~~~~~~~~~li~D~a~~~~~~----~~~~~~~~~---d~~~~s~~K~~~~--~g~g~~~~~~--------~~~~~~ 221 (373)
T cd06453 159 KEIGEIAHEAGVPVLVDGAQSAGHM----PVDVQDLGC---DFLAFSGHKMLGP--TGIGVLYGKE--------ELLEEM 221 (373)
T ss_pred HHHHHHHHHcCCEEEEEhhhhcCce----eeeccccCC---CEEEeccccccCC--CCcEEEEEch--------HHhhcC
Confidence 8999999999999999999875321 112222222 3667789999665 5589998865 344443
Q ss_pred Hhhhc---------------------c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769 283 KDCLS---------------------I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN 340 (419)
Q Consensus 283 ~~~~~---------------------~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 340 (419)
+.... + ..+++.....++.++++......++++.++.+++++++.+.|++++++.++.
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 301 (373)
T cd06453 222 PPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYG 301 (373)
T ss_pred CCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeC
Confidence 32210 0 1245555555555555543334567777888889999999998887776432
Q ss_pred CC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCCeEEEEee--cCHHHHHHHHHHH
Q 014769 341 KP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKNWLRIAFC--AEPSALKDGLGRM 408 (419)
Q Consensus 341 ~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~~Ris~~--~~~~~l~~~l~~l 408 (419)
.+ ..+.++++.++. .+..++.+.| .++||.+.+|..+ +.++++|++++ .++++++++++.|
T Consensus 302 ~~~~~~~~~~~~~~~------~~~~~i~~~l-~~~gi~i~~g~~~~~~~~~~~~~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 302 DAEDRAGVVSFNLEG------IHPHDVATIL-DQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred CccccCCeEEEEECC------cCHHHHHHHH-HHCCEEeccCccchhHHHHHhCCCCeEEEEecCCCCHHHHHHHHhhC
Confidence 21 124455666653 2456676666 5689999887653 23679999996 5899999998764
No 147
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.97 E-value=1.9e-27 Score=225.67 Aligned_cols=330 Identities=12% Similarity=0.096 Sum_probs=233.7
Q ss_pred CChHHHHHHHHHHHhCCC-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-----
Q 014769 59 RTAVEAEDAIVDAVRSGK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA----- 128 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~----- 128 (419)
++++.+++++.+.+.... ...|+. .+...+++++++++.. .+. .++++|++|+|++++++.++.++.
T Consensus 10 ~~~~~v~~~~~~~~~~~~~n~~~~~~~~~-~~~~~l~~a~~~~~~~-~~~-~~~~~i~~t~g~teal~~~~~~~~~~~~~ 86 (382)
T TIGR03403 10 MLDPKVKELMDPFFCDIYGNPNSLHQFGT-ATHPAIAEALDKLYKG-INA-RDLDDIIITSCATESNNWVLKGVYFDEIL 86 (382)
T ss_pred CCCHHHHHHHHHHHHhcCcCCccccHHHH-HHHHHHHHHHHHHHHH-cCc-CCCCeEEEeCCHHHHHHHHHHHHHHhhcc
Confidence 466789999988775421 112332 4567888888888753 221 267899999999999999998762
Q ss_pred CC-CCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769 129 RP-GANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 129 ~~-gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
++ ++.|++..+.|+.+. ..++..|.+++.+++++ ++.+|++.++++++++++++++++|+||||.++| +++
T Consensus 87 ~~~~~~vi~~~~e~ps~~~~~~~~~~~G~~v~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~---~~~ 161 (382)
T TIGR03403 87 KGGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINE--QGTITAEQVREAITEKTALVSVMWANNETGMIFP---IKE 161 (382)
T ss_pred cCCCCEEEEcCCccHHHHHHHHHHHHCCCEEEEEecCC--CCCCCHHHHHHhcccCCeEEEEEcccCCCccccC---HHH
Confidence 45 478999987776554 33556799999998753 3568999999999888899999999999999999 778
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~ 284 (419)
|.++|+++|+++++|++++.. ..+..+..++. .+++.|++|.++.+| +|+++++....+. +.+......
T Consensus 162 I~~la~~~g~~~ivD~a~~~g----~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~vr~~~~~~--p~~~g~~~~ 230 (382)
T TIGR03403 162 IGEICKERGVLFHTDAVQAIG----KIPVDVQKAGV---DFLSFSAHKFHGPKG--VGGLYIRKGVELT--PLFHGGEHM 230 (382)
T ss_pred HHHHHHHcCCEEEEechhhcC----CCccCccccCC---CEEEEcchhhCCCCc--eEEEEECCCCCCC--CcccCCCCC
Confidence 999999999999999998752 11122222222 277889999877677 6888876532111 111000000
Q ss_pred hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEEEeecCcccccCCC
Q 014769 285 CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE---GSMVTMVKLNPWLLEDIN 361 (419)
Q Consensus 285 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~~~~~~~~~~~ 361 (419)
.....++++.+.+.++..+++.. .++++...+++++.++++.+.|++++++.++ .+. .+.++.+.++. .
T Consensus 231 ~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~------~ 302 (382)
T TIGR03403 231 GGRRSGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVV-GDREHRVPNTILISIKG------V 302 (382)
T ss_pred CCcccCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEE-CCCCCCcCCEEEEEeCC------C
Confidence 01124678888888888888653 3457777889999999999999988888744 332 13355555542 1
Q ss_pred CHHHHHHHHHHhcCeEeecCCCCC--------------C-----CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 362 DDIEFALKLAKEESVIVTPGIYVG--------------L-----KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~g~~~~--------------~-----~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+..++...| .++||.+..|..+. . .+.+|+|++ ++++|++++++.|++++++++
T Consensus 303 ~~~~~~~~L-~~~gI~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 303 EGEAMLWDL-NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred CHHHHHHhh-ccCCEEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456666664 77899999876542 1 257999994 689999999999999887754
No 148
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=2.1e-27 Score=225.19 Aligned_cols=324 Identities=14% Similarity=0.118 Sum_probs=226.1
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCC---------CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATN---------SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA- 128 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~- 128 (419)
++++.+++++.+.+.... .++.. .-+.++|+.+++++ +.++++|++|+|++++++.++.++.
T Consensus 10 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~i~~t~~~t~a~~~al~~~~~ 81 (379)
T TIGR03402 10 RVDPEVLEAMLPYFTEYF--GNPSSMHSFGGEVGKAVEEAREQVAKLL------GAEPDEIIFTSGGTESDNTAIKSALA 81 (379)
T ss_pred CCCHHHHHHHHHHHHhcC--CCCCcccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCcHHHHHHHHHHHHHH
Confidence 567889999888765321 12111 12346667777776 5678899999999999999988764
Q ss_pred --CCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 129 --RPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 129 --~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
.+||.|++...+|+.+.. .++..|.+++.+++++ ++.+|++.+++.++++++++++++++||||.++| ++
T Consensus 82 ~~~~~~~vv~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~---~~ 156 (379)
T TIGR03402 82 AQPEKRHIITTAVEHPAVLSLCQHLEKQGYKVTYLPVDE--EGRLDLEELRAAITDDTALVSVMWANNETGTIFP---IE 156 (379)
T ss_pred hcCCCCeEEEcccccHHHHHHHHHHHHcCCEEEEEccCC--CCcCCHHHHHHhcCCCcEEEEEEcccCCeeeccc---HH
Confidence 356889998888876543 3444699998888643 3468999999999888999999999999999999 77
Q ss_pred HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283 (419)
Q Consensus 204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~ 283 (419)
+|.++|+++|+++++|++++. |..+..+...+. .+++.|.+|.++.+| +|++++++... . .|.+.....
T Consensus 157 ~I~~l~~~~g~~vivD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~~gp~G--~g~l~v~~~~~-~-~p~~~g~~~ 225 (379)
T TIGR03402 157 EIGEIAKERGALFHTDAVQAV----GKIPIDLKEMNI---DMLSLSGHKLHGPKG--VGALYIRKGTR-F-RPLLRGGHQ 225 (379)
T ss_pred HHHHHHHHcCCEEEEECcccc----cccccCcccCCC---CEEEEcHHHcCCCCc--eEEEEECCCCC-C-CCcccCCcc
Confidence 899999999999999999985 322233333333 377778889765556 88888765321 1 111110000
Q ss_pred hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC----ceEEEEeecCccccc
Q 014769 284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPE----GSMVTMVKLNPWLLE 358 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~----~g~~~~~~~~~~~~~ 358 (419)
......++++.+...++.++++.. .+++++..++.+++++.+.+.|++ ++++.....+. +...+++...
T Consensus 226 ~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 299 (379)
T TIGR03402 226 ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFEYI----- 299 (379)
T ss_pred CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHHhhCCCEEEeCCCccCCCCEEEEEecCC-----
Confidence 001124566777777777777653 346777778889999999999985 77766332221 1233444321
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+..++...| .++||.+.+|..|.. .+.+|+|++ ++++||+++++.|++++++++
T Consensus 300 ---~~~~~~~~l-~~~gI~v~~g~~c~~~~~~~~~~~~~lg~~~~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 300 ---EGEAILLLL-DMEGICASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred ---CHHHHHHhh-ccCCEEEEchhhcCCCCCCcCHHHHHcCCChhhcCceEEEEcCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 456676655 778999999876532 268999995 689999999999999988764
No 149
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.96 E-value=2.6e-27 Score=223.09 Aligned_cols=318 Identities=16% Similarity=0.137 Sum_probs=222.9
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC--cEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVILSVLARPGANVL 135 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~~~l~~~gd~vl 135 (419)
..+++.+++++...... ....|. .-..++|+.+++++ +++++ .|++++|+++++..++.++..++|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~la~~~------~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi 78 (355)
T TIGR03301 8 LSTSATVRDAMLVDWCH-WDSEFN--DVTDQVRDRLLALA------GGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLL 78 (355)
T ss_pred CCCCHHHHHHhhhhccC-CCHHHH--HHHHHHHHHHHHHh------cCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEE
Confidence 35678888888763211 111233 23467777777776 34443 688899999999999999988888887
Q ss_pred eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC--ccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN--TAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
+..+.+++ +...++..|.++..++.+ .++.+|++.++++++++ .+.+++++++||||...+ +++|.++|++
T Consensus 79 ~~~~~~~~~~~~~~a~~~g~~~~~i~~~--~~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~---~~~i~~l~~~ 153 (355)
T TIGR03301 79 VLINGAYGERLAKICEYLGIPHTDLNFS--EYEPPDLNRIEEALAADPDITHVATVHHETTTGILNP---LEAIAKVARS 153 (355)
T ss_pred EECCCchhhHHHHHHHHcCCceEEEecC--CCCCCCHHHHHHHHHhCCCceEEEEEecCCcccchhH---HHHHHHHHHH
Confidence 77666554 356677889999888864 34578999999988643 456778899999999998 8999999999
Q ss_pred CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhh-----
Q 014769 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----- 285 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----- 285 (419)
+++++|+|++++... ...++..+ +..++++|++|++ +.+| +||+++++ ++++.+...
T Consensus 154 ~~~~livD~~~s~g~----~~~~~~~~---~~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~~~~~~~~~~~~~ 216 (355)
T TIGR03301 154 HGAVLIVDAMSSFGA----IPIDIEEL---DVDALIASANKCLEGVPG--FGFVIARR--------DLLEASAGNARSLY 216 (355)
T ss_pred cCCEEEEEeccccCC----cccchhhc---CccEEEecCCcccccCCc--eeEEEECH--------HHHHHhhCCCCCce
Confidence 999999999877532 12223333 2347889999974 4455 79999875 455544410
Q ss_pred -------------hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEEEE
Q 014769 286 -------------LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSMVTM 349 (419)
Q Consensus 286 -------------~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~ 349 (419)
....++++...+.++.++++....+ ++++..++++++++.+.+.|+++ ++.++..+ .++.++|
T Consensus 217 ~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~~~~~~~~~~~~~~ 295 (355)
T TIGR03301 217 LDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQPLLPERWQSPIIVS 295 (355)
T ss_pred eeHHHHHHHhhhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCeeecCCCCCCCcEEE
Confidence 0123456777777777777653323 36778888999999999999887 66533222 3456778
Q ss_pred eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHH
Q 014769 350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~ 412 (419)
+.++... ..+..++..++ .++||.+.+|..+.. +++|+++ + .++++++++++.|++++
T Consensus 296 ~~~~~~~---~~~~~~~~~~l-~~~gi~i~~~~~~~~-~~iRis~~~~~~~~~i~~~~~~l~~~~ 355 (355)
T TIGR03301 296 FLYPDDP---DFDFDDFYQEL-KERGFVIYPGKLTLA-DTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred EECCCCC---cchHHHHHHHH-HHCCEEEECCccccc-cEEEEecCCCCCHHHHHHHHHHHHhhC
Confidence 8776411 01234566555 677999999876543 7999998 3 58999999999998753
No 150
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.96 E-value=2.5e-27 Score=224.79 Aligned_cols=327 Identities=14% Similarity=0.126 Sum_probs=228.8
Q ss_pred CCChHHHHHHHHHHHhCCC----CCCCCC----CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHHHHHHHHHhc
Q 014769 58 FRTAVEAEDAIVDAVRSGK----FNCYAT----NSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQAVEVILSVLA 128 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~----~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~al~~~~~~l~ 128 (419)
+++++.+++++.+.+.... ...|.. ..+..++|+.+++++ +.+ +++|++|+|++++++.++.++.
T Consensus 10 ~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~ 83 (376)
T TIGR01977 10 YPKPDEVYEAMADFYKNYGGSPGRGRYRLALRASREVEETRQLLAKLF------NAPSSAHVVFTNNATTALNIALKGLL 83 (376)
T ss_pred CCCCHHHHHHHHHHHHhcCCCCCcccchHHHHHHHHHHHHHHHHHHHh------CcCCCCeEEEeCCHHHHHHHHHHhcc
Confidence 4667888999888776532 112332 245678889999988 333 3589999999999999999999
Q ss_pred CCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769 129 RPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 129 ~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
++||+|++..++|+.+. ..++..|.+++.++.+. ++.+|++.++++++++++++++++|+||||.++| +++
T Consensus 84 ~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~---~~~ 158 (376)
T TIGR01977 84 KEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDN--EGLISPERIKRAIKTNTKLIVVSHASNVTGTILP---IEE 158 (376)
T ss_pred CCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCC--CCCcCHHHHHHhcCCCCeEEEEECCCCCccccCC---HHH
Confidence 99999999999998754 34455699988888653 4568999999999888899999999999999999 788
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh-------
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG------- 277 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~------- 277 (419)
|.++|+++|+++|+|++++.... ...+...+. .+++.|++|+++.|. .+|.+++++...+.....
T Consensus 159 i~~l~~~~~~~livD~a~~~g~~----~~~~~~~~~---D~~~~s~~K~l~~p~-g~g~l~~~~~~~~~~~~~~~~~~~~ 230 (376)
T TIGR01977 159 IGELAQENGIFFILDAAQTAGVI----PIDMTELAI---DMLAFTGHKGLLGPQ-GTGGLYIREGIKLKPLKSGGTGSHS 230 (376)
T ss_pred HHHHHHHcCCEEEEEhhhccCcc----CCCchhcCC---CEEEecccccccCCC-CceEEEEcCCcCcCceecCCCcccc
Confidence 99999999999999999986332 122222222 377889999865432 367776655321100000
Q ss_pred -HHHHHHhh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEEEe
Q 014769 278 -IIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMVTMV 350 (419)
Q Consensus 278 -~~~~l~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~ 350 (419)
........ ....++++.....++.++++.......+...++.+++.+.+.+.|.+++++..+ .|. .+..+++
T Consensus 231 ~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~-~~~~~~~~~~~v~~ 309 (376)
T TIGR01977 231 ALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIY-GPADPANRVGVVSF 309 (376)
T ss_pred ccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCCCccccCCeEEE
Confidence 00000000 001235566666666667765444456677888899999999999887777633 321 2345566
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----------CCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----------LKNWLRIAFC--AEPSALKDGLGRMKA 410 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----------~~~~~Ris~~--~~~~~l~~~l~~l~~ 410 (419)
.++. .+..++...|.+++||.+.+|..+. ..+.+|+++. .++++++.+++.|++
T Consensus 310 ~~~~------~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 310 TVEG------IDSEEVADILDEKFDIATRTGLHCAPLAHKTIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred EECC------CCHHHHHHHHhccCCEEEEcccccchHHHHHhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 6642 2456777777555699999887553 2478999994 689999999999975
No 151
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=4.1e-27 Score=211.94 Aligned_cols=330 Identities=15% Similarity=0.123 Sum_probs=245.2
Q ss_pred CCChHHHHHHHHHHHhCC--C---CCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh--c
Q 014769 58 FRTAVEAEDAIVDAVRSG--K---FNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL--A 128 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~--~---~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--~ 128 (419)
.|+.|++.++|...+... + .+.|+. ...+.+.|+.||+.+ ++++++|++|+|+||+.+.++... .
T Consensus 11 Tp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~ll------ga~~~eIiFTSG~TEsnNlaI~g~~~a 84 (386)
T COG1104 11 TPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLL------GADPEEIIFTSGATESNNLAIKGAALA 84 (386)
T ss_pred CCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHh------CCCCCeEEEecCCcHHHHHHHHhhHHh
Confidence 467889999998887653 1 112221 233578889999998 788999999999999999998873 2
Q ss_pred C----CCCeEEeeCCCCCCcHHHHhhc---CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 129 R----PGANVLLPRPGWPYYEGIAQRK---QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 129 ~----~gd~vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
. +|..|++..-.|+...+.++.+ |+++.+++++. +..+|++.|++++++++.+|.+...||.||++.|
T Consensus 85 ~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~V~~--~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQp--- 159 (386)
T COG1104 85 YRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDS--NGLVDLEQLEEALRPDTILVSIMHANNETGTIQP--- 159 (386)
T ss_pred hhcccCCCeEEEcccccHHHHHHHHHHHhcCCeEEEeCCCC--CCeEcHHHHHHhcCCCceEEEEEecccCeeeccc---
Confidence 2 5789999999999887777666 99999999864 4579999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 281 (419)
+++|.++|+++++++++|.+++. |+-+..+..+..+ +...|-+|.+|..| +|.+++++.-.+. |.+...
T Consensus 160 I~ei~~i~k~~~i~fHvDAvQa~----Gkipi~~~~~~vD---~ls~SaHK~~GpkG--iGaLyv~~~~~~~--p~i~GG 228 (386)
T COG1104 160 IAEIGEICKERGILFHVDAVQAV----GKIPIDLEELGVD---LLSFSAHKFGGPKG--IGALYVRPGVRLE--PLIHGG 228 (386)
T ss_pred HHHHHHHHHHcCCeEEEehhhhc----CceeccccccCcc---eEEeehhhccCCCc--eEEEEECCCCccC--ceeccC
Confidence 99999999999999999999997 5544445444433 55668889988888 8888874421111 111111
Q ss_pred HHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-CCCCCCCC--CCceEEEEeecCccccc
Q 014769 282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI-PCISCPNK--PEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 282 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~--p~~g~~~~~~~~~~~~~ 358 (419)
.+.....+++.+.+...+...+++. ..+.++....++.+.++++.+.|.+. |.+..... +.-...+.+.++..
T Consensus 229 gQE~g~RsGTenv~~Ivg~~~A~~~-a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv--- 304 (386)
T COG1104 229 GQERGLRSGTENVPGIVGFGKAAEI-AVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGV--- 304 (386)
T ss_pred cCCCCCCCCCccHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCC---
Confidence 1111123566777777777777765 34667778888999999999999874 66543222 22344555556531
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
..+.+... |..+||.++.|+.+.. .+.+|+|++ ++++|++.+++.+.+++++++.
T Consensus 305 ---~gE~ll~~-L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 305 ---EGESLLLA-LDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred ---cHHHHHHh-ccccCeEEeccccccCCCCCccHHHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 34555544 4778999999998853 368999995 6899999999999999998764
No 152
>PRK07049 methionine gamma-lyase; Validated
Probab=99.96 E-value=6.6e-27 Score=222.37 Aligned_cols=230 Identities=15% Similarity=0.182 Sum_probs=174.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g 152 (419)
+.+|+++ ....|++.||++. ..+++++++|+++++..++.+++++||.|+++.|+|.++...+ ...|
T Consensus 77 y~R~~~P-t~~~Le~~lA~le--------g~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~G 147 (427)
T PRK07049 77 YSRFNHP-NSEIVEDRLAVYE--------GAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFG 147 (427)
T ss_pred ccCCCCc-CHHHHHHHHHHHh--------CCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcC
Confidence 4567764 4689999999987 2457899999999999999999999999999999999986653 4568
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhc-----CCccEEEEeCCCCccccCCCHHHHHHHHHHHHh---CCCeEEEcccccc
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALAD-----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK---LRVMVVADEVYGH 224 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~---~~~~li~De~~~~ 224 (419)
++++.++. ..|.+.+++++. +++++|++++|+||||.+++.+++.+|++.|.+ +++++|+|++|..
T Consensus 148 i~~v~~~~------~~d~~~l~~~l~~~~~~~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~ 221 (427)
T PRK07049 148 VGAVGFAD------GLSEAAIGAAAEAAAAKGRVSLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLG 221 (427)
T ss_pred cEEEEEeC------CCCHHHHHHHHHhhccCCCceEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccc
Confidence 87665541 245666665553 468999999999999999998888888887654 6899999999875
Q ss_pred cccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHH
Q 014769 225 LTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQ 302 (419)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~ 302 (419)
..+. .++ .. +..+++.|+||.++ .+|+|+||++++. ++++.++.... .....++..+.++..
T Consensus 222 ~~~~----~pl-~~---g~divv~S~SK~~gG~~glr~G~vv~~~--------~l~~~l~~~~~~~g~~ls~~~a~l~~r 285 (427)
T PRK07049 222 PVFQ----KPL-EH---GADLSVYSLTKYVGGHSDLVAGAVLGRK--------ALIRQVRALRSAIGTQLDPHSCWMLGR 285 (427)
T ss_pred cccC----Ccc-cc---CCCEEEEcCceeecCCCCcEEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHc
Confidence 4321 122 22 23488899999998 5999999999754 57777776643 345577777877766
Q ss_pred HHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
.|+. +..+.++..++++.+.+.|+++|++..|..|
T Consensus 286 ~L~t-----l~~R~~~~~~~a~~la~~L~~~p~V~~v~yp 320 (427)
T PRK07049 286 SLET-----LVLRMERANRNARAVAEFLRDHPKVEKLHYL 320 (427)
T ss_pred CCCh-----HHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 6643 5555667788999999999988776544444
No 153
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.96 E-value=7.1e-27 Score=221.38 Aligned_cols=338 Identities=14% Similarity=0.134 Sum_probs=230.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|+...... ..+|.+.+++.++++.... .+ ..+..+++..+++++.+..+ .+.+++++++++
T Consensus 26 ~~G~~~lD~~s~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~la~~l~~~~~----~~~~~~~~sG~~ 97 (377)
T PRK02936 26 NNGKTYLDFTSGIAVCNLG-HCHPTVTKAVQEQLDDIWH--VS-NLFTNSLQEEVASLLAENSA----GDLVFFCNSGAE 97 (377)
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhccc--cc-cccCCHHHHHHHHHHHhcCC----CCEEEEeCCcHH
Confidence 4588999999996443323 2679999999999875321 22 23457899999999976433 358999999999
Q ss_pred HHHHHHHHhc-CCC-CeEEeeCCCCCCcHHHHhh-cCCEEE---EEeccCCCCc--ccChHHHHHhhcCCccEEEEeCCC
Q 014769 119 AVEVILSVLA-RPG-ANVLLPRPGWPYYEGIAQR-KQVEVR---HFDLLPERNW--EVDLDAVEALADKNTAAMVIINPG 190 (419)
Q Consensus 119 al~~~~~~l~-~~g-d~vlv~~p~~~~~~~~~~~-~g~~~~---~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~p~ 190 (419)
++..+++... .+| ++|++.+++|++....... .+.... ..++.++..+ -.|++.+++.+.++++++++..++
T Consensus 98 a~~~A~~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~ 177 (377)
T PRK02936 98 ANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQ 177 (377)
T ss_pred HHHHHHHHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEeccc
Confidence 9999999643 244 6799999999865432222 221110 1111111000 116888999888777777877778
Q ss_pred CccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 191 NPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 191 nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
+++|.. .+.+++++|.++|++||+++|+||+|.++.+.|... .+..++..+.+ .++||.++ +|+|+||+++++
T Consensus 178 ~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-~~~~~~~~~di---~t~sK~l~-~G~~ig~v~~~~- 251 (377)
T PRK02936 178 GEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLF-AYEQFGLDPDI---VTVAKGLG-NGIPVGAMIGKK- 251 (377)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhh-HHHhhCCCCcE---EEEccccc-CCCccEEEEEcH-
Confidence 988876 688999999999999999999999999877666432 22222222223 37899986 899999999865
Q ss_pred CCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCC-CCCceE
Q 014769 270 NGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPN-KPEGSM 346 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~-~p~~g~ 346 (419)
++.+.+.... ..+++.+++.|.++.++|+... .++..++++++.+.+++.|++ ++++..+. ....|+
T Consensus 252 -------~~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v~~~g~ 321 (377)
T PRK02936 252 -------ELGTAFGPGSHGSTFGGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNIRGKGL 321 (377)
T ss_pred -------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeEeecce
Confidence 5777665432 3345678999999999987632 123345556666666666654 22222111 123578
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
++|+.++. +...+.. .+.++||.+.|+. .+++|+++ ..+++++++++++|++++
T Consensus 322 ~~~i~~~~-------~~~~~~~-~l~~~gv~v~~~g----~~~lRi~p~~~~~~~~i~~~i~~l~~~~ 377 (377)
T PRK02936 322 MIGIECTE-------EVAPVIE-QLREEGLLVLSAG----PNVIRLLPPLVVTKEELDQAVYLLKKVL 377 (377)
T ss_pred EEEEEecc-------hHHHHHH-HHHHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHhC
Confidence 89998863 2445555 4477899998853 47999996 578999999999998763
No 154
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.96 E-value=1.5e-26 Score=220.89 Aligned_cols=333 Identities=16% Similarity=0.115 Sum_probs=225.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++++|+..+ +..+..+|++++++.++++..... .+....-..++++.+++++ + .+..++++
T Consensus 44 ~~~~~~~~sn~---ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~------g--~~~~~~~~ 112 (406)
T PRK13393 44 PREVTVWCSND---YLGMGQHPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAELADLH------G--KEAALLFT 112 (406)
T ss_pred CccEEEeeccc---ccCCCCCHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHHHHHHh------C--CCcEEEeC
Confidence 46789999887 345667899999999998753211 1111112356777777776 2 24566666
Q ss_pred cHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeC
Q 014769 115 GCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~ 188 (419)
++++++..++..+.. +||.|+.....|......+...|.++..++. .|++.+++.+. +++++|++.+
T Consensus 113 SG~~An~~ai~~l~~~~~g~~I~~~~~~H~s~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~v~~~~ 185 (406)
T PRK13393 113 SGYVSNWAALSTLGSRLPGCVILSDELNHASMIEGIRHSRAEKRIFRH-------NDPADLERKLSDLDPHRPKLVAFES 185 (406)
T ss_pred CcHHHHHHHHHHhhcCCCCCEEEEccchhHHHHHHHHHcCCeEEEeCC-------CCHHHHHHHHHhccCCCCEEEEEcC
Confidence 667789999887765 6777777777776666666777777666543 25566655543 2467788889
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
++|++|.+.| +++|.++|+++++++|+||+|+...++..+.......+. ....++++||||.++++| ||++++
T Consensus 186 v~~~~G~~~~---l~~i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~G---G~~~~~ 259 (406)
T PRK13393 186 VYSMDGDIAP---IAEICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVMG---GYITGS 259 (406)
T ss_pred CCCCCCchhC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhcccC---ceeeCC
Confidence 9999999999 899999999999999999999855444322111111111 123577899999998888 998875
Q ss_pred CCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.++.... ++.+.++..+.++.++++..... ...+.+++++.+++.+.|+++ ++.++ .+.+
T Consensus 260 ~--------~~~~~l~~~~~~~~~t~~~~p~~~aa~~aaL~~~~~~--~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 327 (406)
T PRK13393 260 A--------ALCDFIRSFASGFIFTTSLPPAVAAGALASVRHLKAS--SAERERHQDRVARLRARLDKA-GIPHL-PNPS 327 (406)
T ss_pred H--------HHHHHHHHhCcCceecCccCHHHHHHHHHHHHHHhhC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCC
Confidence 4 56777765432 23455666677777777653222 123456788888999999876 66633 4444
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
. ++.+.++.. .+..++...|++++||.+.++..+.. ..++|+++. .++++++++++.|++++.++
T Consensus 328 ~-i~~v~~~~~-----~~~~~l~~~L~~~~Gi~v~~~~~p~~p~g~~~iRis~~~~~t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 328 H-IVPVMVGDP-----VLCKQISDELLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARL 397 (406)
T ss_pred C-eEEEEeCCH-----HHHHHHHHHHHHhCCEEEEeECCCCCCCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhc
Confidence 4 444444321 12456777776667999988765443 368999994 68999999999999988754
No 155
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.96 E-value=1.4e-26 Score=218.28 Aligned_cols=316 Identities=14% Similarity=0.126 Sum_probs=221.9
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCC--CcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSA--DDVYVTLGCKQAVEVILSVLARPGANV 134 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t~g~~~al~~~~~~l~~~gd~v 134 (419)
..++.+++++.... ..+.+ ..-+.++|+.+++++ +.++ +.|++|+|++++++.++.++..+||.+
T Consensus 13 ~~~~~v~~~~~~~~-----~~~~~~~~~~~~~~r~~la~l~------~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~v 81 (363)
T TIGR02326 13 TTSRTVKEAMLFDW-----CTWDSDYNIVVEQIRQQLLALA------TAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKL 81 (363)
T ss_pred CCCHHHHHHhCCCC-----CCCChHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeE
Confidence 45666666654432 12222 112345667777766 4444 479999999999999999998899988
Q ss_pred EeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769 135 LLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 135 lv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 210 (419)
++..+++++. ...++..|.+++.++.++ ++.+|++.++++++. +++.+.+++++||||+.+| +++|.++|+
T Consensus 82 lv~~~~~~~~~~~~~a~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---i~~I~~l~~ 156 (363)
T TIGR02326 82 LVVINGAYGARIVQIAEYLGIPHHVVDTGE--VEPPDVVEVEAILAADPAITHIALVHCETTTGILNP---IEAVAKLAH 156 (363)
T ss_pred EEEeCChhhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCccEEEEEeecCCccccCc---HHHHHHHHH
Confidence 8877766654 356788899999888753 456899999998875 3466788999999999999 889999999
Q ss_pred hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHh-----
Q 014769 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKD----- 284 (419)
Q Consensus 211 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~----- 284 (419)
++|+++|+|++++. |..+.++..++. .++++|++|++ +.+| +||+++++ +.++.+..
T Consensus 157 ~~g~~livD~~~~~----g~~~~~~~~~~~---D~~~~s~~K~l~~p~G--~G~l~~~~--------~~~~~~~~~~~~~ 219 (363)
T TIGR02326 157 RHGKVTIVDAMSSF----GGIPIDIAELHI---DYLISSANKCIQGVPG--FGFVIARQ--------AELAACKGNARSL 219 (363)
T ss_pred HcCCEEEEEccccc----cCcccchhhcCc---cEEEecCccccccCCc--ceEEEECH--------HHHHHhhcCCCce
Confidence 99999999998874 222233444443 37888999985 3345 79999865 23333211
Q ss_pred ----------h---h-ccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEE
Q 014769 285 ----------C---L-SIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSMV 347 (419)
Q Consensus 285 ----------~---~-~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~ 347 (419)
. . ...++++.+.+.++.++++....+ .+++..++++++++++++.|+++ ++..+..+ ..+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~ 298 (363)
T TIGR02326 220 SLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFEPLLDDEIQSPII 298 (363)
T ss_pred eecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCeeccCcccCCceE
Confidence 0 0 112356777777777777653333 46778899999999999999887 66633222 34556
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~ 413 (419)
.++.++... ..+..++...| +++||.+.||..+ ..+++|+++ + .+.++++++++.|++++.
T Consensus 299 ~~~~~~~~~---~~~~~~v~~~L-~~~gi~v~~g~~~-~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 299 TSFYSPEDP---DYRFADFYQRL-KEQGFVIYPGKVS-QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred EEEECCCCC---CCCHHHHHHHH-HHCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 677776410 01345666665 6779999999765 357999996 4 588999999999998763
No 156
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=1.8e-26 Score=220.54 Aligned_cols=330 Identities=17% Similarity=0.175 Sum_probs=223.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+.++++|+.|+|. ++.++.+.++..+. .. ...|.+ ..|..++++++++++.+.+|. +.++++++++
T Consensus 19 ~~~~~~l~~g~~~----~~~p~~~~~~~~~~--~~-~~~~~~~~~~~~~g~~~~~~~~~~~la~~~g~--~~~~v~~~~~ 89 (398)
T cd00613 19 DQSMSFLGSGTYK----HNPPAVIKRNILEN--EF-YTAYTPYQPEISQGRLQALFELQTMLCELTGM--DVANASLQDE 89 (398)
T ss_pred ccCcccccccccC----CcCcHHHHHHhccc--cC-cccCCCCChhhhhhHHHHHHHHHHHHHHHHCC--CccceeccCc
Confidence 5567999999964 45566665555444 22 235555 689999999999999988774 3446767665
Q ss_pred HH-HHHHHHHHHhcCC--CCeEEeeCCCCCCcHHHHhhcC----CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769 116 CK-QAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQ----VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 116 ~~-~al~~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
++ ++...++.++..+ ||+|++++|.|+.+...+...+ .+++.+++.+ ++.+|++++++++.+++++|++++
T Consensus 90 g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~t~~viv~~ 167 (398)
T cd00613 90 ATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVPSDE--GGTVDLEALKEEVSEEVAALMVQY 167 (398)
T ss_pred hHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEeccCC--CCCcCHHHHHHhcCCCeEEEEEEC
Confidence 54 5555555566665 9999999999999888777777 8888887643 346899999999988889999998
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEE
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWL 264 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~ 264 (419)
|+ |||.+. +.+++|.++|+++|+++|+|+++..... ......+ +..+++.|+||++ +| |+++||+
T Consensus 168 ~~-~~G~~~--~~l~~i~~la~~~g~~livD~~~~~~~~----~~~~~~~---~~d~~~~s~~K~~-~p~g~Ggp~~g~l 236 (398)
T cd00613 168 PN-TLGVFE--DLIKEIADIAHSAGALVYVDGDNLNLTG----LKPPGEY---GADIVVGNLQKTG-VPHGGGGPGAGFF 236 (398)
T ss_pred CC-CCceec--chHHHHHHHHHhcCCEEEEEeccccccC----CCChHHc---CCCEEEeeccccC-CCCCCCCCceeEE
Confidence 85 899985 4569999999999999999998764321 1111122 2348899999997 65 7899999
Q ss_pred EeeCCCCccchhhHHHHHHh------------------------------hhccccCCchHHHHHHHHHHcccchHHHHH
Q 014769 265 VTNDPNGIFQKSGIIDSIKD------------------------------CLSIYSDIPTFIQGAIPQILEKTKEDFFCK 314 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~------------------------------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 314 (419)
++++ ++++.+.. ......+.+.....++...+.......+++
T Consensus 237 ~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~~~~~~~~~~~~~a~~~l~~~~~~g~~~ 308 (398)
T cd00613 237 AVKK--------ELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATSNICTGQALLALMAAMYIVYLGPEGLKE 308 (398)
T ss_pred EEhh--------hhHhhCCCCeeccccccCCCcceEEecccchhhcccccccccceecHHHHHHHHHHHHHHhCHHHHHH
Confidence 9865 23333210 001111222223223333333333567888
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE--EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEE
Q 014769 315 LIDTLRESAEICYDGVKEIPCISCPNKPEGSMV--TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRI 392 (419)
Q Consensus 315 ~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~--~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ri 392 (419)
..++++++++++.+.|+++++.. .+.+..+ ++++++... ..+..+++..| .++||.+.... ....+.+|+
T Consensus 309 ~~~~~~~~~~~l~~~L~~~~~~~---~~~~~~~~~v~~~~~~~~---~~~~~~~~~~L-~~~gi~~~~~~-~~~~~~lRi 380 (398)
T cd00613 309 IAERAHLNANYLAKRLKEVGGVL---PFNGPFFHEFVLRLPPLY---GIRAEDLAKAL-IDGGFHAPTMY-LPVDGTLMI 380 (398)
T ss_pred HHHHHHHHHHHHHHHHHhcCCcc---cCCCCeeEEEEEEcCCcc---hHHHHHHHHhh-hhcCccccccc-cCCCCeEEE
Confidence 89999999999999999874433 2333323 456665310 01356677776 56799764422 223578999
Q ss_pred Ee--ecCHHHHHHHHHHH
Q 014769 393 AF--CAEPSALKDGLGRM 408 (419)
Q Consensus 393 s~--~~~~~~l~~~l~~l 408 (419)
++ ..+++||+++++.|
T Consensus 381 s~~~~~t~edid~~~~~L 398 (398)
T cd00613 381 EPTETETKEELDALLEAL 398 (398)
T ss_pred EcCCCCCHHHHHHHHHhC
Confidence 99 36899999998764
No 157
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=3.4e-26 Score=216.75 Aligned_cols=338 Identities=13% Similarity=0.097 Sum_probs=227.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
....||+. |-+.. .|+++++++++.+...... ...+.......++|+.+++++ +. ++++++
T Consensus 17 ~~~~~~~~---~~~~~-~p~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lA~~~------g~--~~~~~~ 84 (387)
T PRK09331 17 EEEFINLD---PIQRG-GILTPEARKALIEYGDGYSVCDYCPGRLDQIKKPPIADFHEDLAEFL------GM--DEARVT 84 (387)
T ss_pred cccccccC---hhhcC-CCCCHHHHHHHHHHHhccCCCcccccccccccChHHHHHHHHHHHHh------CC--CcEEEe
Confidence 45566664 33332 4678889999988763211 011112234689999999998 33 468899
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-------CccEEEE
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-------NTAAMVI 186 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i 186 (419)
+|+++++..++.+++++||+|+++.++|.+....++..|++++.++...+.++.+|++.+++++++ ++++|++
T Consensus 85 ~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l 164 (387)
T PRK09331 85 HGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALL 164 (387)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEE
Confidence 999999999999999999999999999988777788899999998874334567999999988753 5788999
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
++|+||||...+ +++|.++|+++|+++++|++|+... .+.+...++. .+++.|++|+++ .+.++||+++
T Consensus 165 ~~~~~~tG~~~~---l~~I~~la~~~g~~livD~a~~~g~----~~~~~~~~g~---D~~~~s~~K~l~-~~~~~G~l~~ 233 (387)
T PRK09331 165 THVDGNYGNLAD---AKKVAKVAHEYGIPFLLNGAYTVGR----MPVDGKKLGA---DFIVGSGHKSMA-ASAPSGVLAT 233 (387)
T ss_pred ECCCCCCccccc---HHHHHHHHHHcCCEEEEECCcccCC----cCCCHHHcCC---CEEEeeCccccc-CCCCEEEEEE
Confidence 999999999988 9999999999999999999998632 1122223332 378899999965 4568999988
Q ss_pred eCCCCccchhhHHHHHHhhhc---------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 267 NDPNGIFQKSGIIDSIKDCLS---------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~---------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
++ ++++.+..... +..+.......++...++.. .+.. +..++..++.+++++.|++++|++
T Consensus 234 ~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aal~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~ 303 (387)
T PRK09331 234 TE--------EYADKVFRTSRKFGVKEVELLGCTLRGAPLVTLMASFPHV-VERV-KRWDEEVKKARWFVDELEKIEGFK 303 (387)
T ss_pred CH--------HHHhhcccccCCCcccceeeeceecCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCEE
Confidence 65 45555543210 11112111222222223221 1122 234455677778999999988887
Q ss_pred CCCC-CCceEEEEeecCccc--c-cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHH
Q 014769 338 CPNK-PEGSMVTMVKLNPWL--L-EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 338 ~~~~-p~~g~~~~~~~~~~~--~-~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~ 412 (419)
++.. +....++.+..+... . .......++.+.| +++||...+. +....+|+.. +.++++++.+++.|++++
T Consensus 304 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L-~~~gI~~~~~---~~~~i~ri~~~g~t~~di~~l~~aL~~i~ 379 (387)
T PRK09331 304 QLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEEL-KKRGIHGIKP---GATKEFKLSTYGLTWEQVEYVADAFKEIA 379 (387)
T ss_pred EeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHH-HHcCceEEcc---CCceEEEEEeccCCHHHHHHHHHHHHHHH
Confidence 3311 233445445544110 0 0011234566666 6779984432 2355678887 779999999999999988
Q ss_pred HHH
Q 014769 413 QRH 415 (419)
Q Consensus 413 ~~~ 415 (419)
+++
T Consensus 380 ~~~ 382 (387)
T PRK09331 380 EKY 382 (387)
T ss_pred Hhc
Confidence 764
No 158
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.96 E-value=1.3e-26 Score=222.81 Aligned_cols=348 Identities=16% Similarity=0.128 Sum_probs=229.1
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|..+|||..|..... ....+|.+.+++.+++... ..|+...+..++...+++.+.+..+. +.+++++++|+++
T Consensus 33 ~dG~~~id~~~~~~~~~-lG~~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~--~~~~v~~~~sgse 107 (413)
T cd00610 33 VDGNRYLDFLSGIGVLN-LGHNHPEVVEALKEQLAKL--THFSLGFFYNEPAVELAELLLALTPE--GLDKVFFVNSGTE 107 (413)
T ss_pred CCCCEEEEcCccHHhhc-cCCCCHHHHHHHHHHHHhC--cCccCcccCCHHHHHHHHHHHHhCCC--CCCEEEEcCcHHH
Confidence 35889999998754321 1126789999999998653 24544334456666666666665442 5789999999999
Q ss_pred HHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCC----CCcccChHHHHHhhcC
Q 014769 119 AVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE----RNWEVDLDAVEALADK 179 (419)
Q Consensus 119 al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~----~~~~~~~~~l~~~~~~ 179 (419)
++..+++.+. .+++.|++.+++|+++.......+. ++..++.++. ..+..|++.+++.+++
T Consensus 108 a~~~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~ 187 (413)
T cd00610 108 AVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEE 187 (413)
T ss_pred HHHHHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhc
Confidence 9999999874 4689999999999986544433221 2344443211 1234588889888875
Q ss_pred --CccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769 180 --NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 180 --~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
+...+++++| +|++|..+ +.+++++|.++|+++++++|+||+|+++...+... ....++...+ +.|+||.++
T Consensus 188 ~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~-~~~~~~~~~d---~~t~sK~l~ 263 (413)
T cd00610 188 HPEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMF-AFEHFGVEPD---IVTLGKGLG 263 (413)
T ss_pred CCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchh-hHhhcCCCCC---eEEEccccc
Confidence 3445566666 56779865 78889999999999999999999999764444321 1112222212 348899976
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHH--Hhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSI--KDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l--~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
. |+|+||+++++ ++++.+ .... ..+++.+++.+.++.++++.... .+..++++++.+.+.+.|++
T Consensus 264 ~-g~~~g~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~ 331 (413)
T cd00610 264 G-GLPLGAVLGRE--------EIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRE 331 (413)
T ss_pred C-ccccEEEEEcH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHH
Confidence 5 89999999864 577765 2222 23456777888887777764221 24456666677777776665
Q ss_pred CCC-CCCC-CCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHH
Q 014769 333 IPC-ISCP-NKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGL 405 (419)
Q Consensus 333 ~~~-~~~~-~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l 405 (419)
+.. ...+ .....|.++++.++.... ........+...+ .++||.+.|+. .+++|+++. .+++++++++
T Consensus 332 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~gv~v~~~~----~~~lR~~~~~~~t~~~i~~~~ 406 (413)
T cd00610 332 LAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAA-LERGLLLRPSG----GNVIRLLPPLIITEEEIDEGL 406 (413)
T ss_pred HHhhCCcEEEeecCceEEEEEEecCCCcCCcchHHHHHHHHHH-HHCCeEEeecC----CCEEEEECCCcCCHHHHHHHH
Confidence 311 1111 123456777887754200 0001235566665 56799999975 578999884 5899999999
Q ss_pred HHHHHHH
Q 014769 406 GRMKAFC 412 (419)
Q Consensus 406 ~~l~~~~ 412 (419)
++|++++
T Consensus 407 ~~l~~~l 413 (413)
T cd00610 407 DALDEAL 413 (413)
T ss_pred HHHHHhC
Confidence 9998763
No 159
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.96 E-value=2.9e-26 Score=218.59 Aligned_cols=337 Identities=16% Similarity=0.139 Sum_probs=226.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|..+|||..|.....-.. .+|.+.+++.++++.... +... ...+....+++.+.+.. ..+.+++++++++
T Consensus 37 ~dG~~~iD~~~~~~~~~lGh-~~p~v~~a~~~~~~~~~~--~~~~-~~~~~~~~l~~~l~~~~----~~~~~~~~~sGse 108 (403)
T PRK05093 37 QQGKEYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWH--ISNV-FTNEPALRLAKKLIDAT----FAERVFFANSGAE 108 (403)
T ss_pred CCCCEEEEcCcCHHhccCCC-CCHHHHHHHHHHHHhcCc--ccCc-cCCHHHHHHHHHHHhhC----CCCEEEEeCchHH
Confidence 45888999988733222222 689999999999875321 1111 11222334444444322 2369999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHHHhh
Q 014769 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEALA 177 (419)
Q Consensus 119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~~ 177 (419)
|+..+++.... ..++|+..+.+|++....+...+.. +..++ -.|++.+++.+
T Consensus 109 A~e~a~klar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~l 181 (403)
T PRK05093 109 ANEAAFKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVP-------FNDLAAVKAVI 181 (403)
T ss_pred HHHHHHHHHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeC-------CCCHHHHHHHh
Confidence 99999986521 2367888888888764333222111 11111 12788898888
Q ss_pred cCCccEEEEeCCCCccccCC--CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769 178 DKNTAAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 178 ~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
.+++++|++. |.||+|-++ +.+++++|.++|++||+++|+||+|.++.++|... +....+..+. +.||||.++
T Consensus 182 ~~~~aaiiie-p~~~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~-~~~~~~~~pd---i~s~sK~l~ 256 (403)
T PRK05093 182 DDHTCAVVVE-PIQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLF-AYMHYGVTPD---ILTSAKALG 256 (403)
T ss_pred cCCeEEEEEe-cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCCCCC---EEEeccccc
Confidence 7665555554 888887654 89999999999999999999999999887766532 2222222222 458999976
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
+|+|+||+++++ ++++.+... ...+++.+++.|.++.++|+... -.+..++++++++.+.+.|+++.
T Consensus 257 -~G~rig~vv~~~--------~i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~---~~~~~~~~~~~~~~l~~~L~~~~ 324 (403)
T PRK05093 257 -GGFPIGAMLTTA--------EIASHFKVGTHGSTYGGNPLACAVAEAVFDIIN---TPEVLEGVKARRQRFVDGLQKIN 324 (403)
T ss_pred -CCcceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHH
Confidence 899999999976 577777653 33356678889988888776422 13445778888888888887741
Q ss_pred -CCCC-CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHH
Q 014769 335 -CISC-PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKA 410 (419)
Q Consensus 335 -~~~~-~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 410 (419)
.... ...+..|+++|+.++... ..+..+++..+++ +||.+.|+. .+++|+++ ..++++|++++++|++
T Consensus 325 ~~~~~~~~~~~~G~~~~~~l~~~~---~~~~~~~~~~l~~-~Gv~v~~~g----~~~lRl~~~~~~~~~~i~~~~~~l~~ 396 (403)
T PRK05093 325 QKYGVFSEIRGMGLLIGAELKPQY---KGRARDFLNAAAE-EGVMVLVAG----PDVLRFAPSLVIEEADIDEGLARFEK 396 (403)
T ss_pred hhCCCeEeEeeCceEEEEEecCcc---hhHHHHHHHHHHH-CCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 1111 224466899999886321 0135677777755 699998753 47899986 4589999999999999
Q ss_pred HHHHH
Q 014769 411 FCQRH 415 (419)
Q Consensus 411 ~~~~~ 415 (419)
++.++
T Consensus 397 ~l~~~ 401 (403)
T PRK05093 397 AVAKV 401 (403)
T ss_pred HHHHh
Confidence 98754
No 160
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.96 E-value=1.3e-25 Score=212.74 Aligned_cols=323 Identities=17% Similarity=0.123 Sum_probs=224.7
Q ss_pred CCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC----CC
Q 014769 58 FRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR----PG 131 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~----~g 131 (419)
.+++|.+++++.+.+... ....| .+..++.+.+.+.+.+..| .++.++++++|+++++..++.++.. ++
T Consensus 30 ~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~g--~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~ 104 (371)
T PRK13520 30 TEPHPIARKAHEMFLETNLGDPGLF---PGTAKLEEEAVEMLGELLH--LPDAYGYITSGGTEANIQAVRAARNLAKAEK 104 (371)
T ss_pred cCchHHHHHHHHHHHhcCCCCcccC---ccHHHHHHHHHHHHHHHhC--CCCCCeEEecCcHHHHHHHHHHHHhhccCCC
Confidence 356788889988887642 11112 2334433444444444444 4556789999999999999877654 57
Q ss_pred CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
|+|++.+++|+.+...++..|.+++.++.+ .++.+|++.++++++++++.|++++++|+||.+.| +++|.++|++
T Consensus 105 ~~vl~~~~~h~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~---l~~I~~l~~~ 179 (371)
T PRK13520 105 PNIVVPESAHFSFDKAADMLGVELRRAPLD--DDYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDP---IPELSKIALE 179 (371)
T ss_pred ceEEecCcchHHHHHHHHHcCceEEEecCC--CCCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHH
Confidence 899999999999888888899998888764 34568999999999888888888889999999999 8999999999
Q ss_pred CCCeEEEcccccccccCC-CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc--
Q 014769 212 LRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-- 288 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-- 288 (419)
+|+++++|++|+.+...- .....+ .+....-..+..|.+|. +.+|.++|++++.++ ++++.+.....+
T Consensus 180 ~g~~livD~a~~~~~~~~~~~~~~~-~~~~~~vd~~~~s~~K~-~~a~~~~G~~~~~~~-------~~~~~l~~~~~~~~ 250 (371)
T PRK13520 180 NGIFLHVDAAFGGFVIPFLDDPPNF-DFSLPGVDSITIDPHKM-GLAPIPAGGILFRDE-------SYLDALAVDTPYLT 250 (371)
T ss_pred cCCCEEEEecchhHHHHhhcCCCCc-cccCCCCceEEECCccc-cCccCCceEEEEcCH-------HHHHhhcccCcccc
Confidence 999999999998754211 111111 11111112444578896 777889998887652 344544321111
Q ss_pred -------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCC
Q 014769 289 -------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN 361 (419)
Q Consensus 289 -------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~ 361 (419)
.++.+.....++..+++....+.+++..++..++++++.+.|+++ ++..+..|..+ ++.+.++
T Consensus 251 ~~~~~~~~gt~~~~~~~~~~~al~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~-~v~~~~~-------- 320 (371)
T PRK13520 251 SKKQATLTGTRSGAGVAATYAVMKYLGREGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLN-IVAFDDP-------- 320 (371)
T ss_pred CCCCcceEeeccChHHHHHHHHHhhhcHhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCce-EEEEecC--------
Confidence 122334445566666665445667788889999999999999887 77623245444 5556654
Q ss_pred CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769 362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~ 413 (419)
+..++..+| .++||.+.++. ..+++|+|+. .++++++.+++.|+++++
T Consensus 321 ~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 321 NPDEVREKL-RERGWRVSVTR---CPEALRIVCMPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHhh
Confidence 356676666 55699987753 3568999984 689999999999998765
No 161
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.96 E-value=3.2e-26 Score=217.78 Aligned_cols=338 Identities=17% Similarity=0.106 Sum_probs=224.4
Q ss_pred hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
...+|+.++||..|..... .-.-+|.+.+++.++++..... .+.......++.+.++++. ..+.++++++
T Consensus 35 ~d~~G~~~lD~~~g~~~~~-lGh~~p~v~~ai~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~S 105 (396)
T PRK04073 35 KDPEGNRYMDMLSAYSAVN-QGHRHPKIIQALKDQADKVTLTSRAFHSDQLGPWYEKVAKLT--------GKDMVLPMNT 105 (396)
T ss_pred EECCCCEEEEcCCCHHhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhcC--------CCCeEEEcCC
Confidence 3446889999988843321 1236799999999998754321 1111122234555555442 2368999999
Q ss_pred HHHHHHHHHHHhcC---------CC-CeEEeeCCCCCCcHHHHhh-cCCEEE---EEeccCCC--CcccChHHHHHhhcC
Q 014769 116 CKQAVEVILSVLAR---------PG-ANVLLPRPGWPYYEGIAQR-KQVEVR---HFDLLPER--NWEVDLDAVEALADK 179 (419)
Q Consensus 116 ~~~al~~~~~~l~~---------~g-d~vlv~~p~~~~~~~~~~~-~g~~~~---~~~~~~~~--~~~~~~~~l~~~~~~ 179 (419)
+++|++.+++.... +| ++|+....+|++....+.. .+.... +-+..+.- -.-.|++.+++.+++
T Consensus 106 GseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~ 185 (396)
T PRK04073 106 GAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITP 185 (396)
T ss_pred hHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHHHhhcCCcccccCCCCCCCCceEeCCCCHHHHHHhccc
Confidence 99999999987642 34 7788888888876433322 221100 00000000 001268889888877
Q ss_pred CccEEEEeCCCCccccCCCH-HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 180 NTAAMVIINPGNPCGNVFTY-HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~~~~~-~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
+++++++..|+||||.+++. +++++|.++|+++|+++|+||+|.++.+.|..+. ....+...++ .++||.++++|
T Consensus 186 ~~~~viiep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~-~~~~~~~pdi---~~~sK~lg~gg 261 (396)
T PRK04073 186 NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFA-CDWDNVTPDM---YILGKALGGGV 261 (396)
T ss_pred CeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHH-hhhcCCCCCE---EEecccccCCC
Confidence 77777777778999998765 5799999999999999999999998766553221 1112222222 35799999888
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC--CC
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI--PC 335 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~ 335 (419)
+|+||+++++ ++++.+.... ..+++.+++.+.++.++|+...++ ...++.+++++++.+.|+++ +.
T Consensus 262 ~~ig~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~ 330 (396)
T PRK04073 262 FPISCVAANR--------DILGVFTPGSHGSTFGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPM 330 (396)
T ss_pred CcceEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCc
Confidence 9999999875 5777775432 335667888888888888643222 23355666788888888775 22
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
+. . .+..|.++++.++. +..++..+| .++||.+.+.. .+++|+++ ..+++++++++++|++++
T Consensus 331 i~-~-~~~~g~~~~~~~~~-------~~~~~~~~l-~~~Gv~~~~~~----~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 331 IK-E-VRGRGLFIGVELNE-------PARPYCEAL-KEEGLLCKETH----ETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred cc-c-eecceEEEEEEecc-------hHHHHHHHH-HHCCeEEecCC----CCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 33 2 23346778887752 356777776 55799997632 46899996 578999999999999875
No 162
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.96 E-value=2.8e-26 Score=217.06 Aligned_cols=287 Identities=17% Similarity=0.155 Sum_probs=197.8
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEE
Q 014769 82 TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRH 157 (419)
Q Consensus 82 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~ 157 (419)
+..+..+|+++++++.. .+++++++|+++++..++.+++++||+|+++.|.|..... .+...|+++..
T Consensus 62 ~~p~~~~Le~~iA~~~g--------~~~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~ 133 (400)
T PRK06234 62 GNPTSTEVENKLALLEG--------GEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF 133 (400)
T ss_pred CCccHHHHHHHHHHHhC--------CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEE
Confidence 34678999999999982 2468889999999999999999999999999999976443 34667888888
Q ss_pred EeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCCCc
Q 014769 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPM 235 (419)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~ 235 (419)
++. .|++++++++++++++|++++|+||||.+.+ +++|.++|+++ |+++|+|++|....+. .++
T Consensus 134 vd~-------~d~e~l~~~i~~~tklI~iesP~NPtG~v~d---l~~I~~la~~~~~~i~livDea~~~~~~~----~~l 199 (400)
T PRK06234 134 VDT-------SNLEEVRNALKANTKVVYLETPANPTLKVTD---IKAISNIAHENNKECLVFVDNTFCTPYIQ----RPL 199 (400)
T ss_pred ECC-------CCHHHHHHHhccCCeEEEEECCCCCCCCcCC---HHHHHHHHHhcCCCCEEEEECCCCchhcC----Cch
Confidence 764 2788999999888999999999999999999 88889999997 9999999999875442 112
Q ss_pred cccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhh--h-ccccCCchHHHHHHHHHHcccchHH
Q 014769 236 GLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDC--L-SIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 236 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~--~-~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
..+ ..+++.|+||.++++|.++ ||+++++ ++++.++.. . ......++.....+...++.
T Consensus 200 -~~g---~Divv~S~sK~l~g~g~~~gG~v~~~~--------~~~~~l~~~~~~~~~g~~l~p~~a~l~~~~l~t----- 262 (400)
T PRK06234 200 -QLG---ADVVVHSATKYLNGHGDVIAGFVVGKE--------EFINQVKLFGIKDMTGSVIGPFEAFLIIRGMKT----- 262 (400)
T ss_pred -hhC---CcEEEeeccccccCCCCceeEEEEecH--------HHHHHHHHHHHHHhcCCCCCHHHHHHHHhccCc-----
Confidence 222 3488999999998889775 9988865 466666543 1 12333444444443333332
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcC
Q 014769 312 FCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 375 (419)
+..+.++..++...+.+.|+++|.+..+..|. .|..+.++++... .....|++.| +-.+
T Consensus 263 l~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l~~~~----~~~~~f~~~l-~~~~ 337 (400)
T PRK06234 263 LQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGV----EEGKVVMNNV-KLAT 337 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEecCcH----HHHHHHHHhC-Ccce
Confidence 44556666778888888888766543333332 2334456665210 1234555554 4445
Q ss_pred eEeecCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 376 VIVTPGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 376 v~v~~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+.++-|.... . ++.+|+|+|.+ +.+.+++.|.+++..
T Consensus 338 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~~ 397 (400)
T PRK06234 338 LAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLE--DVDDIIADLKQALDL 397 (400)
T ss_pred EeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCC--CHHHHHHHHHHHHHH
Confidence 4444443221 0 35799999874 455666666666654
No 163
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.96 E-value=8.9e-26 Score=213.34 Aligned_cols=323 Identities=17% Similarity=0.144 Sum_probs=222.1
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~ 137 (419)
.++.+.+++++.+.... ....|. .-..++|+.+++++ |...+.+.|++++|+++++..++.++..+||.|+++
T Consensus 14 ~~~~~~~~~a~~~~~~~-~~~~~~--~~~~~~~~~l~~l~----~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~ 86 (368)
T PRK13479 14 LTTSRTVREAMLRDWGS-WDDDFN--ALTASVRAKLVAIA----TGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVP 86 (368)
T ss_pred CCCCHHHHHHhCCCCCC-CChHHH--HHHHHHHHHHHHHh----CCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 35677777776554311 111122 23567777777776 222223568899999999999999999999999999
Q ss_pred CCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769 138 RPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (419)
Q Consensus 138 ~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (419)
.++|++. ...++..|.+++.++.+. ++.+|++++++++++ +++.+++++|+||||...| +++|.++|++++
T Consensus 87 ~~~~~~~~~~~~~~~~g~~~~~i~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~---~~~i~~l~~~~~ 161 (368)
T PRK13479 87 DNGAYGARIAQIAEYLGIAHVVLDTGE--DEPPDAAEVEAALAADPRITHVALVHCETTTGILNP---LDEIAAVAKRHG 161 (368)
T ss_pred eCCchHHHHHHHHHHcCCcEEEEECCC--CCCCCHHHHHHHHHhCCCCcEEEEEcccCccccccC---HHHHHHHHHHcC
Confidence 8888765 367788899999998753 346899999998864 3567889999999999999 889999999999
Q ss_pred CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhh------
Q 014769 214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL------ 286 (419)
Q Consensus 214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------ 286 (419)
+++|+|++++. +. ...++..++. .+++.|++|++ +.+| +||++++. ++++.+....
T Consensus 162 ~~livDa~~~~---g~-~~~~~~~~~~---d~~v~s~~K~l~g~~G--~G~l~~~~--------~~~~~~~~~~~~~~~~ 224 (368)
T PRK13479 162 KRLIVDAMSSF---GA-IPIDIAELGI---DALISSANKCIEGVPG--FGFVIARR--------SELEACKGNSRSLSLD 224 (368)
T ss_pred CEEEEEccccc---CC-ccccccccCc---eEEEecCccccccCCC--ceEEEECH--------HHHHHhhcCCCCeeec
Confidence 99999977653 22 2223333333 26778999974 4567 79999865 3444443221
Q ss_pred ------------ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEee
Q 014769 287 ------------SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVK 351 (419)
Q Consensus 287 ------------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~ 351 (419)
...++++...+.++.++++... ..++++..+++.++++.+.+.|+++ ++..+..+. ....+.+.
T Consensus 225 ~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~ 303 (368)
T PRK13479 225 LYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFEPLLDAEIQSPIIVTFH 303 (368)
T ss_pred HHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCcccCCchhcCceEEEEE
Confidence 1113566666666666665432 2346777889999999999999888 776332221 11122223
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHH
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~ 415 (419)
++... + .+..++..+| .++||.+.+|..+ ..+++|++. + .++++++.+++.|++++++.
T Consensus 304 ~~~~~--~-~~~~~l~~~L-~~~gi~v~~g~~~-~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~ 364 (368)
T PRK13479 304 APADP--A-YDFKEFYERL-KEQGFVIYPGKLT-QVDTFRIGCIGDVDAADIRRLVAAIAEALYWM 364 (368)
T ss_pred CCCCC--C-cCHHHHHHHH-HHCCEEEecCCCC-CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHc
Confidence 33210 0 1456777676 5679999988644 256899996 4 58999999999999998765
No 164
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.95 E-value=4.7e-26 Score=201.25 Aligned_cols=312 Identities=20% Similarity=0.244 Sum_probs=201.3
Q ss_pred CCCC-CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH--HHHhc----C--------CCCeEEeeCCCC
Q 014769 77 FNCY-ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI--LSVLA----R--------PGANVLLPRPGW 141 (419)
Q Consensus 77 ~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~--~~~l~----~--------~gd~vlv~~p~~ 141 (419)
..+| +...|++++|+..++.+ ++++++|++..+++-.+..- ..++. . +.-+.++|.|+|
T Consensus 61 ~RNY~G~l~Gipe~r~l~a~ll------gv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGY 134 (425)
T PF12897_consen 61 CRNYPGGLDGIPEARELFAELL------GVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGY 134 (425)
T ss_dssp TTSS-S-SS--HHHHHHHHHHH------TS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--
T ss_pred ccCCCCccCChHHHHHHHHHHh------CCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCc
Confidence 4589 88899999999999999 89999999987776554322 12221 1 124689999999
Q ss_pred CCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-ccEEEEeCC--CCccccCCCHHHHHHHHHH-HHhCCCeEE
Q 014769 142 PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-TAAMVIINP--GNPCGNVFTYHHLQEIAEM-ARKLRVMVV 217 (419)
Q Consensus 142 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~i~~p--~nptG~~~~~~~l~~i~~~-~~~~~~~li 217 (419)
.-+..+++.+|++...+|+.++ ++|+|.+++++.++ ...-+.|.| +||||.++|.+..++++++ ....+..|+
T Consensus 135 DRHFai~E~~Giemi~VpM~~d---GPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~ 211 (425)
T PF12897_consen 135 DRHFAITEHFGIEMIPVPMTED---GPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIF 211 (425)
T ss_dssp HHHHHHHHHCT-EEEEEEEETT---EE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEE
T ss_pred hHHHHHHHhhCcEEEecCCCCC---CCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEE
Confidence 9999999999999999998654 68999999988543 334455666 8999999999999999998 446799999
Q ss_pred EcccccccccC-CCCC-C--Cc----cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-cc
Q 014769 218 ADEVYGHLTFG-SIPY-T--PM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SI 288 (419)
Q Consensus 218 ~De~~~~~~~~-~~~~-~--~~----~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~ 288 (419)
-|.+|..-.+. .... . .+ ..-+..++++.+.|+||. ..||.+++++.++. +-++.++... ..
T Consensus 212 WDNAY~vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKI-Tf~GaGva~~aaS~--------~Nl~~~~~~~~~~ 282 (425)
T PF12897_consen 212 WDNAYAVHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKI-TFPGAGVAFFAASE--------ANLAWIKKHLSVQ 282 (425)
T ss_dssp EE-TTTT-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTT-S-TTSS-EEEEE-H--------HHHHHHHHHHHHH
T ss_pred eecCceEeeccccccchhhhHHHHHHHHcCCCCeEEEEeccccc-ccCCcceeeeecCH--------HHHHHHHHHhcCc
Confidence 99999976662 2221 1 11 123456689999999999 79999999999876 4555555553 33
Q ss_pred ccCCchHHHHHHHHHHcccc---hHHHHHHHHHHHHHHHHHHHHhhc-CC---CCCCCCCCCceEEEEeecCcccccCCC
Q 014769 289 YSDIPTFIQGAIPQILEKTK---EDFFCKLIDTLRESAEICYDGVKE-IP---CISCPNKPEGSMVTMVKLNPWLLEDIN 361 (419)
Q Consensus 289 ~~~~~~~~~~a~~~~l~~~~---~~~~~~~~~~~~~~~~~l~~~l~~-~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~ 361 (419)
+.++.-+.|..-..++.... ..+.+++.+.++-+.+.+.+.|++ +. ++..|..|.||+|+++...+
T Consensus 283 tIgpdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~~ia~Wt~P~GGYFIsld~~~------- 355 (425)
T PF12897_consen 283 TIGPDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGLGIASWTKPKGGYFISLDVLD------- 355 (425)
T ss_dssp -S---HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGGTSEEE---SBSS-EEEEEST-------
T ss_pred eeCccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCCCeeEecCCCCceEEEEecCC-------
Confidence 56788889988888887632 456777777777787777777765 43 44447899999999998875
Q ss_pred CHHHHHHHHHHhcCeEeec-CCCCCC-----CCeEEEEee-cCHHHHHHHHHHHHHHHH
Q 014769 362 DDIEFALKLAKEESVIVTP-GIYVGL-----KNWLRIAFC-AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~-g~~~~~-----~~~~Ris~~-~~~~~l~~~l~~l~~~~~ 413 (419)
.....+.++.++.||.++| |..|-. +..|||+++ .+.+|++.+++.+..+++
T Consensus 356 G~AkrvV~lakeAGV~LT~AGAtfPyg~DP~D~nIRiAPS~P~leel~~Am~~~~~cv~ 414 (425)
T PF12897_consen 356 GTAKRVVELAKEAGVALTPAGATFPYGKDPRDSNIRIAPSYPSLEELETAMDVFATCVK 414 (425)
T ss_dssp T-HHHHHHHHHHTTEE---TTTTSGGG--TTS-EEEE--SSS-HHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHhCceeCCCCCCCCCCCCCCCCcEEecCCCCCHHHHHHHHHHHHHHHH
Confidence 3455556777999999998 555522 578999996 577999999999987765
No 165
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.95 E-value=1.2e-26 Score=217.48 Aligned_cols=309 Identities=16% Similarity=0.102 Sum_probs=221.9
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----------
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR----------- 129 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~----------- 129 (419)
+..+.+.+...+.. ....|....+..++++++++++.+.+|.+.+++++++|+|+++++..++.+++.
T Consensus 12 ~~~~~~~~~~~~n~-~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~ 90 (345)
T cd06450 12 PALLLEMLTSAKNA-IDFTWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGG 90 (345)
T ss_pred HHHHHHHHHHhcCC-CCcccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccc
Confidence 34444555544433 334588888999999999999999888764567899999999999999988753
Q ss_pred -CC--CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHH
Q 014769 130 -PG--ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 130 -~g--d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~ 200 (419)
++ +.|+++.++|..+...+...|.+++.++++++ +.+|++.|++++++ +++.+++++|+||||.+.+
T Consensus 91 ~~~~~~~v~~~~~~h~~~~~~~~~~g~~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~-- 166 (345)
T cd06450 91 RGIDKLVIVCSDQAHVSVEKAAAYLDVKVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDP-- 166 (345)
T ss_pred cccCCeEEEEcCcchhHHHHHHHHHhcCeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCC--
Confidence 23 47888899999988888888999999987643 37899999999876 6778889999999999977
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc-cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM-GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~-~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++|.++|+++|+++++|++|+.+.+........ .... .-..+..|++|+ +.++.++|+++.+
T Consensus 167 -~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~--~~d~~~~s~~K~-l~~p~g~g~~~~~------------ 230 (345)
T cd06450 167 -LEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIE--RVDSISVDPHKY-GLVPLGCSAVLVR------------ 230 (345)
T ss_pred -HHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCcc--ccCEEEEchhHh-hCCCcchHHHHHH------------
Confidence 8999999999999999999998866432211110 1111 112556699997 4566778887541
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
...+.++...+. ...++++.++..++++++.+.|.+++++.++..+..+++ .++++.....
T Consensus 231 --------------~~~~~~~l~~l~---~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~iv-~f~~~~~~~~- 291 (345)
T cd06450 231 --------------ALKLWATLRRFG---RDGYGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLV-CFRLKPSVKL- 291 (345)
T ss_pred --------------HHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceeEE-EEEECCcchh-
Confidence 333444444443 356788888999999999999998878764434555544 4445431000
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKA 410 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~ 410 (419)
..+..++..+| .++|+.+.++..+....++|+++. ++.++++++++.|++
T Consensus 292 ~~~~~~i~~~L-~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 292 DELNYDLSDRL-NERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred hHHHHHHHHHH-HhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 01245666666 566666666555545679999994 378999999999875
No 166
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.95 E-value=2.4e-25 Score=212.30 Aligned_cols=335 Identities=13% Similarity=0.128 Sum_probs=226.8
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC--CC------CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY--AT------NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y--~~------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
+-|..+.+ .|.++.+++++.+.+.....+.+ .. ...+.++|+.+++++ +.++++|++++|+
T Consensus 5 ~yld~aa~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~ 73 (402)
T TIGR02006 5 IYLDYAAT-----TPVDPRVAEKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELI------GADSREIVFTSGA 73 (402)
T ss_pred EEeeCCcC-----CCCCHHHHHHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCH
Confidence 55555543 25678889998877643211111 11 123556788888887 5678899999999
Q ss_pred HHHHHHHHHHhc----CCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769 117 KQAVEVILSVLA----RPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 117 ~~al~~~~~~l~----~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
+++++.++.++. .+||+|++..++|+.+... ++..|.+++.++++ .++.+|++.+++++++++++++++++
T Consensus 74 t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~l~~~~~lv~v~~~ 151 (402)
T TIGR02006 74 TESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRYLEREGFEVTYLPPK--SNGLIDLEELKAAIRDDTILVSIMHV 151 (402)
T ss_pred HHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCCEEEEEECC
Confidence 999999887763 5889999999999875443 34568898888865 34568999999999888899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
+||||.+.| +++|.++|+++|+++++|++++... .+..+..++. .+++.|.+|.++.+| +|+++++++
T Consensus 152 ~n~tG~~~~---~~~I~~l~~~~g~~livD~a~a~g~----~~~~~~~~~~---D~~~~s~~K~~gp~G--~G~l~~~~~ 219 (402)
T TIGR02006 152 NNEIGVIQD---IAAIGEICRERKVFFHVDAAQSVGK----IPINVNELKV---DLMSISGHKIYGPKG--IGALYVRRK 219 (402)
T ss_pred CcCceeccc---HHHHHHHHHHcCCEEEEEcchhcCC----cccCccccCC---CEEEEehhhhcCCCc--eEEEEEccC
Confidence 999999998 8899999999999999999998632 2222333333 377788999865445 899888753
Q ss_pred CCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceE
Q 014769 270 NGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSM 346 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~ 346 (419)
......+ ........ ....++++.....++..+++.. .+.++...++.+++++.+.+.|++++++.....+. ...
T Consensus 220 ~~~~~~~-~~~g~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~~~~v~~~~~~~~~~p~ 297 (402)
T TIGR02006 220 PRVRLEA-LIHGGGHERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRLLNGIKSIEEVYLNGDLEHRVPG 297 (402)
T ss_pred CCCCCCc-eecCCCccCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCC
Confidence 2111001 10000000 1113456666666776777653 24577778889999999999998877765221111 111
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHH
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGL 405 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l 405 (419)
.+.+.++. .+..++...+ +++.+..|..+.. .+++|+|++ ++++|+++++
T Consensus 298 ~~~v~f~~------~~~~~~~~~l---~~i~v~~G~~c~~~~~~~~~~l~~lg~~~~~~~~~vR~S~~~~~t~edid~l~ 368 (402)
T TIGR02006 298 NLNVSFNY------VEGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGINDELAHSSIRFTIGRFTTEEEIDYAV 368 (402)
T ss_pred eEEEEEeC------cCHHHHHHhc---CCEEEechhhcCCCCCCccHHHHHcCCChhhcCceEEEEecCCCCHHHHHHHH
Confidence 11233331 1234444333 5888887766532 378999995 6899999999
Q ss_pred HHHHHHHHHH
Q 014769 406 GRMKAFCQRH 415 (419)
Q Consensus 406 ~~l~~~~~~~ 415 (419)
+.|+++++.+
T Consensus 369 ~~l~~~~~~~ 378 (402)
T TIGR02006 369 KLVKSAIDKL 378 (402)
T ss_pred HHHHHHHHHH
Confidence 9999998765
No 167
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.95 E-value=2.1e-25 Score=212.40 Aligned_cols=346 Identities=15% Similarity=0.151 Sum_probs=228.5
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
..+|+.++||..|.....-.. .+|.+.+++.+++..... ..|.. ....++.+.++++. ..++++++++
T Consensus 35 d~dG~~~lD~~~g~~~~~lGh-~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~s 104 (406)
T PRK12381 35 DQQGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT--------FADRVFFCNS 104 (406)
T ss_pred eCCCCEEEEcCcCHhhccCCC-CCHHHHHHHHHHHhhcccccCccCC-HHHHHHHHHHHhhC--------CCCeEEEcCC
Confidence 346888999988743322222 489999999999865311 11211 11234444444432 2469999999
Q ss_pred HHHHHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCEEEE----EeccCC--CCcccChHHHHHhhcCCc
Q 014769 116 CKQAVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVEVRH----FDLLPE--RNWEVDLDAVEALADKNT 181 (419)
Q Consensus 116 ~~~al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~~~~----~~~~~~--~~~~~~~~~l~~~~~~~~ 181 (419)
+++|++.+++.... +...|+..+.+|++....+...+..... .++.+. ...-.|++.+++.+.+++
T Consensus 105 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 184 (406)
T PRK12381 105 GAEANEAALKLARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQT 184 (406)
T ss_pred cHHHHHHHHHHHHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCe
Confidence 99999999998631 3478999999999876444333322110 011110 001237888998887555
Q ss_pred cEEEEeCCCCccccCC--CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCc
Q 014769 182 AAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259 (419)
Q Consensus 182 ~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 259 (419)
.++ +++|.|++|-++ +.+++++|.++|++||+++|+||+|.++.+.|..+ ....++..+. +.|+||.++ +|+
T Consensus 185 aav-iiEPv~~~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~-~~~~~~v~pD---i~t~sK~l~-gG~ 258 (406)
T PRK12381 185 CAV-IVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD---VLTTAKALG-GGF 258 (406)
T ss_pred eEE-EEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchh-hhHhhCCCCC---EEEehhhhh-CCC
Confidence 444 457999887654 79999999999999999999999998876666432 2222222222 248999975 799
Q ss_pred eeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-CCC
Q 014769 260 RFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-CIS 337 (419)
Q Consensus 260 r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~ 337 (419)
|+||+++++ ++++.+.... ..+++.+++.+.++.+.|+... -.+..++++++.+++.+.|+++. ...
T Consensus 259 ~ig~~~~~~--------~~~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~---~~~~~~~~~~~~~~l~~~L~~l~~~~~ 327 (406)
T PRK12381 259 PIGAMLTTE--------KCASVMTVGTHGTTYGGNPLASAVAGKVLELIN---TPEMLNGVKQRHDWFVERLNTINARYG 327 (406)
T ss_pred ceEEEEEcH--------HHHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhhCC
Confidence 999999875 5777776533 3356778888888888776522 22456777888888888887641 122
Q ss_pred CCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769 338 CPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 338 ~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~ 414 (419)
.+. ....|.++++.++... ......+.. .+.++||.+.+.. ++.+|+++. .++++|++++++|++++++
T Consensus 328 ~~~~vrg~Gl~~~~~l~~~~---~~~~~~~~~-~l~~~Gv~v~~~g----~~~lRl~p~~~~t~~~i~~~~~~l~~~l~~ 399 (406)
T PRK12381 328 LFSEIRGLGLLIGCVLNAEY---AGKAKQISQ-EAAKAGVMVLIAG----PNVVRFAPALNISEEEITTGLDRFARACER 399 (406)
T ss_pred CEEEEecCeEEEEEEecCch---hhHHHHHHH-HHHHCCcEEeeCC----CCEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 111 2345788888775310 001234444 4567899997642 468999984 6899999999999999988
Q ss_pred Hhcc
Q 014769 415 HTKK 418 (419)
Q Consensus 415 ~~~~ 418 (419)
+.++
T Consensus 400 ~~~~ 403 (406)
T PRK12381 400 FVSR 403 (406)
T ss_pred HHhc
Confidence 7654
No 168
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.95 E-value=1.3e-25 Score=210.08 Aligned_cols=324 Identities=13% Similarity=0.110 Sum_probs=214.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
=.++||- .|..+..+...+++++++++.+..++ |. +..++++++.+++.+.+| .+++++|+|+|+++
T Consensus 7 ~~~~ina-~g~~t~~g~s~~~~~v~~a~~~~~~~-----~~---~~~~~~~~~~~~~a~~~g----~~~~~~~~g~t~al 73 (363)
T TIGR01437 7 LKKVINA-SGKMTILGVSTVSDEVADAQKRGAQN-----YF---EIKELVNKTGEYIANLLG----VEDAVIVSSASAGI 73 (363)
T ss_pred CceEEEC-CcEeecCCCCCCCHHHHHHHHHHHhc-----CC---CHHHHHHHHHHHHHHhhC----CCeEEEEcCHHHHH
Confidence 3456663 33223233345789999999988643 32 245777777777776555 35789999999999
Q ss_pred HHHHHHhcCCCC---------------eEEeeCCCCCCc----HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCc
Q 014769 121 EVILSVLARPGA---------------NVLLPRPGWPYY----EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT 181 (419)
Q Consensus 121 ~~~~~~l~~~gd---------------~vlv~~p~~~~~----~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 181 (419)
..++.+++++|| +|+++.|.|..+ ...+...|..+++++. ++.+|++.+++++++++
T Consensus 74 ~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g~~~v~v~~----~~~~d~~~le~ai~~~t 149 (363)
T TIGR01437 74 AQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGGGKVVEAGY----ANECSAEQLEAAITEKT 149 (363)
T ss_pred HHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcCCeEEEEcC----CCCCCHHHHHHhcChhc
Confidence 999999999998 999999888765 4667778999888865 24589999999999888
Q ss_pred cEEE-EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 182 AAMV-IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 182 ~~v~-i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
++++ +++|+||+|.+.+ +++|.++|+++|+++|+|++|+.- ...+..++. .+++.|+||. +.|++
T Consensus 150 ~ai~~v~~~~~~~g~~~~---~~~i~~~a~~~gi~vivD~a~~~~------~~~~~~~g~---D~~~~S~~K~--l~gp~ 215 (363)
T TIGR01437 150 AAILYIKSHHCVQKSMLS---VEDAAQVAQEHNLPLIVDAAAEED------LQKYYRLGA---DLVIYSGAKA--IEGPT 215 (363)
T ss_pred eEEEEEecCCCCcCCcCC---HHHHHHHHHHcCCeEEEECCCCCc------hHHHHHcCC---CEEEEeCCcc--cCCCc
Confidence 8766 5678999999999 788999999999999999999721 111112322 3777899997 46778
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhhhcc------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDCLSI------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
.|+++.++ ++++.++..... .+..+..++.++...+.. ...+..+.+.++++.+.+.|.++|
T Consensus 216 ~G~l~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~gl~aAl~~~~~----~~~~~~~~~~~~~~~l~~~L~~i~ 283 (363)
T TIGR01437 216 SGLVLGKK--------KYIEWVKLQSKGIGRAMKVGKENILGLTAALEQYLS----TGKESGAEMVAKLTPFIEALNTLK 283 (363)
T ss_pred eEEEEEcH--------HHHHHHHhccCCCcceeccCHHHHHHHHHHHHHHHc----cCcccHHHHHHHHHHHHHHHhcCC
Confidence 99988754 455555332110 011122222232222222 112223344456677999999888
Q ss_pred CCCCCCC-CCceE---EEEeecCcccccCCCCHHHHHHHHHHhcC--eEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHH
Q 014769 335 CISCPNK-PEGSM---VTMVKLNPWLLEDINDDIEFALKLAKEES--VIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGR 407 (419)
Q Consensus 335 ~~~~~~~-p~~g~---~~~~~~~~~~~~~~~~~~~~~~~ll~~~g--v~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~ 407 (419)
++.+... +..+. ..-+.++... .+ .+..++...| ++++ |.+.+ .|...+.+|+++ ..+++|++.++++
T Consensus 284 g~~~~~~~~~~~~~~~~~~v~~~~~~-~g-~~~~~l~~~L-~~~~~~I~~r~--~~~~~~~~~l~~~~~~~~e~~~~~~~ 358 (363)
T TIGR01437 284 GVSASIVQDEAGRDIARAEIRFDESE-LG-MTAADVVQAL-RQGEPAIYTRG--YKANEGIIEIDPRSVTGGQLDIIVER 358 (363)
T ss_pred CeEEEEecCCCCCcCceEEEEEeccC-CC-CCHHHHHHHH-hcCCCCEEEee--eeecCCeEEEEeecCCHHHHHHHHHH
Confidence 8874311 11111 1112232110 01 2567777766 6567 55544 455678999999 5679999999999
Q ss_pred HHHHH
Q 014769 408 MKAFC 412 (419)
Q Consensus 408 l~~~~ 412 (419)
|++++
T Consensus 359 l~~~~ 363 (363)
T TIGR01437 359 IREIV 363 (363)
T ss_pred HHHhC
Confidence 98763
No 169
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.95 E-value=7.8e-25 Score=207.49 Aligned_cols=314 Identities=16% Similarity=0.145 Sum_probs=215.2
Q ss_pred hHHHHHHHHHHHhCC--CCCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc------CCC
Q 014769 61 AVEAEDAIVDAVRSG--KFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA------RPG 131 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~--~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~------~~g 131 (419)
.+.+.+++...+... ....|+. ..-..++++.+++++ +++++++++++|+++++..++.++. .+|
T Consensus 33 ~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~------g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g 106 (373)
T TIGR03812 33 HPIAVKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLL------HLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRT 106 (373)
T ss_pred hHHHHHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHh------CCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCC
Confidence 455566666654321 1222321 111245556666665 4567788999999999988877654 367
Q ss_pred CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
|+|++++++|..+...++..|++++.++++ .++.+|++++++.+.+++..+++++|+||||.+.+ +++|.++|++
T Consensus 107 ~~vl~~~~~h~~~~~~~~~~G~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~---~~~i~~l~~~ 181 (373)
T TIGR03812 107 PNIIVPESAHFSFEKAAEMLGLELRYAPLD--EDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDD---IEELSKIALE 181 (373)
T ss_pred cEEEECCcchHHHHHHHHHcCCeEEEEeeC--CCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCC---HHHHHHHHHH
Confidence 999999999999988899999999998875 35678999999998877766666678999999988 8899999999
Q ss_pred CCCeEEEcccccccccC----CCC--CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh
Q 014769 212 LRVMVVADEVYGHLTFG----SIP--YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC 285 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~----~~~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~ 285 (419)
+|+++|+|++|+.+... +.. ...+...+. ..+..|.+|. ++++.++|+++..++ ++++.++..
T Consensus 182 ~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~~~---d~~~~s~~K~-~~~~~~~G~~~~~~~-------~~~~~l~~~ 250 (373)
T TIGR03812 182 NGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLPGV---QSITIDPHKM-GLSPIPAGGILFRSK-------SYLKYLSVD 250 (373)
T ss_pred cCCeEEEEcCchhHHHHHHhcCCCCCCccccCCCC---CEEEECcccc-CCCcCCceEEEEeCH-------HHHhhhccc
Confidence 99999999999865321 000 111111111 1344578894 778888887776442 355544321
Q ss_pred hcc---------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 286 LSI---------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 286 ~~~---------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
..+ .++.+.....++..+++....+.+++..+++.++++++++.|+++ ++..+..|. ..++.++++
T Consensus 251 ~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~-~~~v~~~~~--- 325 (373)
T TIGR03812 251 APYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPV-LNIVAFEVD--- 325 (373)
T ss_pred CcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCC-ceEEEEEeC---
Confidence 111 123444556666666765445677888899999999999999988 554232333 446666664
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA 410 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 410 (419)
+..++..+| .++||.+.++. .++++|+++. .++++++.+++.|++
T Consensus 326 -----~~~~v~~~L-~~~gi~v~~~~---~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 326 -----DPEEVRKKL-RDRGWYVSVTR---CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred -----CHHHHHHHH-HHCCceeccCC---CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 244666666 56799987653 3579999995 689999999999875
No 170
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.95 E-value=8.6e-26 Score=216.86 Aligned_cols=348 Identities=13% Similarity=0.083 Sum_probs=228.1
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|..... .-..+|.+.+++.+++..... .+.+..+..+|+++|++++. ..++|++++|
T Consensus 42 l~d~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~-~~~~~~~~~~lae~l~~~~~-------~~~~v~~~~s 112 (423)
T TIGR00713 42 LYDVDGNEYIDYVLSWGPLI-LGHAHPRVVEAVKEALERGTS-YGAPTEAEILLAKEIISRVP-------SVEMVRFVNS 112 (423)
T ss_pred EEeCCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCCc-CCCCCHHHHHHHHHHHHhCC-------cccEEEEeCC
Confidence 33456999999999965432 124679999999999987543 23345678899999999872 1368999999
Q ss_pred HHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc---CCEEEEEeccCC-------CCcc---cChHHHHHhhc--
Q 014769 116 CKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK---QVEVRHFDLLPE-------RNWE---VDLDAVEALAD-- 178 (419)
Q Consensus 116 ~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~---g~~~~~~~~~~~-------~~~~---~~~~~l~~~~~-- 178 (419)
+++|++.+++.... ..++|+..+++|+++...+... +......+..+. .... .|++.+++.+.
T Consensus 113 GseA~e~Alk~ar~~~gr~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~ 192 (423)
T TIGR00713 113 GTEATMSAVRLARGYTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY 192 (423)
T ss_pred HHHHHHHHHHHHHHhhCCCEEEEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc
Confidence 99999999887532 4589999999999875433321 111111111000 0000 16888888876
Q ss_pred -CCccEEEEe-CCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769 179 -KNTAAMVII-NPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 179 -~~~~~v~i~-~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
+++.++++. .|+| +|.+.+ .+++++|.++|++||+++|+||+|.++.++...... .++..++ +.+|||.++
T Consensus 193 ~~~~aavi~ep~~~~-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~--~~~~~pD---i~t~sK~l~ 266 (423)
T TIGR00713 193 GEEIAGVIVEPVAGN-MGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQE--YFGVEPD---LTTLGKIIG 266 (423)
T ss_pred CCcEEEEEEeCCCCC-CCCcCCCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHH--HhCCCcc---hhhhhhhhc
Confidence 345566654 5677 788776 699999999999999999999999988543211111 1222222 237999976
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l 330 (419)
+|+|+||+++++ ++++.+... ...+++.+++++.++.++|+... ....+...+....+++.+.+.+
T Consensus 267 -~G~pig~v~~~~--------~i~~~~~~~~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (423)
T TIGR00713 267 -GGLPVGAFGGRR--------EIMERLAPEGPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVL 337 (423)
T ss_pred -CCCceeeeeEHH--------HHHHhhCcCCCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 899999999975 577777532 22355788899988888887533 2356666666666777777777
Q ss_pred hcCCCCCCCCCCCceEEEEeecCccccc-----CCCCH---HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLE-----DINDD---IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALK 402 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~-----~~~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~ 402 (419)
+++ ++.......++++ .+.+...... ...+. ..+...++ ++||.+.++ .| +.+|+++..++++++
T Consensus 338 ~~~-~~~~~v~~~g~~~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~-~~---~~~~l~~~~t~~~i~ 410 (423)
T TIGR00713 338 EDT-GIPHTVNRVGSMF-SLFFTEEEVTNYADAKKSDTELFAKFFHEML-DKGVFLPPS-QF---EACFLSAAHTEEDIE 410 (423)
T ss_pred Hhc-CCCeEEEeeccEE-EEEEecCCCCChhhhhcccHHHHHHHHHHHH-HCCeEEecC-Cc---cceeeECCCCHHHHH
Confidence 666 4431112333333 3333211000 00111 24555665 579998654 22 357899888999999
Q ss_pred HHHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQR 414 (419)
Q Consensus 403 ~~l~~l~~~~~~ 414 (419)
+++++|.+++.+
T Consensus 411 ~~~~~l~~~l~~ 422 (423)
T TIGR00713 411 NTIEAAEEVFAE 422 (423)
T ss_pred HHHHHHHHHHhh
Confidence 999999999865
No 171
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.95 E-value=2.3e-25 Score=208.87 Aligned_cols=290 Identities=18% Similarity=0.183 Sum_probs=203.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g 152 (419)
+.+|+++ ...+|++.++++. +. +..++++|+++++..++ .+..+||+|++++|.|++. ...+...|
T Consensus 46 y~r~~~p-t~~~le~~la~l~------g~--~~~~~~~sG~~ai~~~~-~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 115 (366)
T PRK08247 46 YSRTGNP-TRGVLEQAIADLE------GG--DQGFACSSGMAAIQLVM-SLFRSGDELIVSSDLYGGTYRLFEEHWKKWN 115 (366)
T ss_pred ccCCCCc-hHHHHHHHHHHHh------CC--CcEEEEcCHHHHHHHHH-HHhCCCCEEEEecCCcCcHHHHHHHHhhccC
Confidence 4556654 5789999999997 33 33577888899999876 5678999999999999874 33445688
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++++++++|++++|+||+|.. .++++|+++|+++|+++|+|++|......
T Consensus 116 ~~v~~vd~-------~d~~~l~~~i~~~tklv~le~P~NP~~~~---~dl~~I~~la~~~g~~lIvD~t~~~~~~~---- 181 (366)
T PRK08247 116 VRFVYVNT-------ASLKAIEQAITPNTKAIFIETPTNPLMQE---TDIAAIAKIAKKHGLLLIVDNTFYTPVLQ---- 181 (366)
T ss_pred ceEEEECC-------CCHHHHHHhcccCceEEEEECCCCCCCcH---HHHHHHHHHHHHcCCEEEEECCCcccccc----
Confidence 88887764 37899999998889999999999998654 55999999999999999999999642221
Q ss_pred CCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++ . .+..++++|+||.++.+ +.+.|+++++++ ++.+.+...... ....++..++.+...++.
T Consensus 182 ~p~-~---~g~di~i~S~sK~~~g~~d~~~G~iv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~l~t---- 246 (366)
T PRK08247 182 RPL-E---EGADIVIHSATKYLGGHNDVLAGLVVAKGQ-------ELCERLAYYQNAAGAVLSPFDSWLLIRGMKT---- 246 (366)
T ss_pred Cch-h---cCCcEEEeecceeccCCCceeeeEEecChH-------HHHHHHHHHHHhcCCCCChHHHHHHHhccCc----
Confidence 111 1 23358999999997653 468999987532 466666554432 344566666666555543
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEeecCcccccCCCCHHHHHHH---------HHHhcCeEeec
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSMVTMVKLNPWLLEDINDDIEFALK---------LAKEESVIVTP 380 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~---------ll~~~gv~v~~ 380 (419)
+..+.++.+++++.+.+.|+++|++..+..| .+|+|.| .++.. .....|++. +.....+.+.|
T Consensus 247 -l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf-~~~~~-----~~~~~~~~~l~~~~~~~slg~~~sl~~~p 319 (366)
T PRK08247 247 -LALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSF-RLQDE-----EWVNPFLKSLKLITFAESLGGVESFITYP 319 (366)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEE-EECCH-----HHHHHHHHcCCcceEccCCCCCceEEECC
Confidence 4455667799999999999998888754455 7888877 56421 011122222 11234556667
Q ss_pred CCCCCC-------------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 381 GIYVGL-------------KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 381 g~~~~~-------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
++.++. ++.+|+|++.. +.+.+++.|++++.+
T Consensus 320 ~~~~~~~~~~~~r~~~gi~~~~~R~svGlE--~~~dl~~dl~~al~~ 364 (366)
T PRK08247 320 ATQTHADIPEEIRIANGVCNRLLRFSVGIE--NVEDLIADLKQAFKQ 364 (366)
T ss_pred cccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 754421 35799999874 566777777777764
No 172
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.95 E-value=4.7e-25 Score=213.40 Aligned_cols=326 Identities=18% Similarity=0.194 Sum_probs=217.1
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC--CCCHHHHHHHHHH---HHhhCCCCCCCCcEEEcccHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADY---LSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~---l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..++|+.|.+. +..+..+.++.... .....|.+. .-...+++.++++ +.+..| ++.+++++|+|++
T Consensus 69 ~~~~lg~g~~~----~~~p~~~~~~~~~~---~~~~~y~~~~~~~~~g~~~~~~e~~~~la~l~g--~~~~~v~~~~g~t 139 (447)
T PRK00451 69 YPSFLGAGAYD----HYIPAVVDHIISRS---EFYTAYTPYQPEISQGTLQAIFEYQTMICELTG--MDVANASMYDGAT 139 (447)
T ss_pred CcccCcccccC----CcCcHHHHHHHhch---hHHHhcCCCCCccchHHHHHHHHHHHHHHHHhC--CCcceEEecCcHH
Confidence 56788888643 34455555444322 111234440 1123355555533 355555 4566899999999
Q ss_pred HHHHHHHHHhc-CCCCeEEeeCCCCCCcHHHHhh----cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769 118 QAVEVILSVLA-RPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (419)
Q Consensus 118 ~al~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 192 (419)
+++..++.++. .+||+|+++++.|+.+...+.. .|.+++.+++++ + .+|+++++++++++++++++++| ||
T Consensus 140 ~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~--~-~~d~~~l~~~i~~~t~~v~l~~p-n~ 215 (447)
T PRK00451 140 ALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYED--G-VTDLEALEAAVDDDTAAVVVQYP-NF 215 (447)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCC--C-CCCHHHHHHhcCCCeEEEEEECC-CC
Confidence 99999998875 6899999999999887766544 688999988754 3 78999999999888999999999 89
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEE--cccccccccCCCCCCCccccCCCCcEEEEe---cCCCcCCCCCceeEEEEee
Q 014769 193 CGNVFTYHHLQEIAEMARKLRVMVVA--DEVYGHLTFGSIPYTPMGLFGSIVPVITLG---SISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~---s~sK~~~~~G~r~G~~~~~ 267 (419)
||.+.+ +++|.++|+++|+++++ |.+..... .....++. .++++ ++||.+.+.|+++||++++
T Consensus 216 tG~v~~---l~~I~~~a~~~~~~~iv~~d~~~~g~~------~~~~~~~~---D~~~~s~~k~~~~~~~~Gpg~G~l~~~ 283 (447)
T PRK00451 216 FGVIED---LEEIAEIAHAGGALFIVGVDPVSLGLL------KPPGEYGA---DIVVGEGQPLGIPLSFGGPYLGFFATR 283 (447)
T ss_pred CCeeCC---HHHHHHHHHHCCCEEEEEcChHHhccC------CCcccCCC---CEEEECCCcCCCCCCCCCCCchHHHhh
Confidence 999988 99999999999999988 54322110 11122332 25555 6777777888999999886
Q ss_pred CCCCccchhhHHHHH----------------------------Hhhhccc-cCCchHHH-HHHHHHHcccchHHHHHHHH
Q 014769 268 DPNGIFQKSGIIDSI----------------------------KDCLSIY-SDIPTFIQ-GAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l----------------------------~~~~~~~-~~~~~~~~-~a~~~~l~~~~~~~~~~~~~ 317 (419)
. ++++.+ +...... ...+...+ .++...++....+.+++..+
T Consensus 284 ~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~ 355 (447)
T PRK00451 284 K--------KLVRQMPGRLVGETVDADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAE 355 (447)
T ss_pred H--------HHHhhCCCCEeeeecccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHH
Confidence 5 344432 1111111 11122222 33333343333577899999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEE--eecCcccccCCCCHHHHHHHHHHhcCeE-eecCCCCC--CCCeEEE
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTM--VKLNPWLLEDINDDIEFALKLAKEESVI-VTPGIYVG--LKNWLRI 392 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~--~~~~~~~~~~~~~~~~~~~~ll~~~gv~-v~~g~~~~--~~~~~Ri 392 (419)
++.++++++.+.|++++++. +. .+++|.+ ++++ .+..++.++|++ +||. ..++..++ ..+++|+
T Consensus 356 ~~~~~~~~l~~~L~~~~g~~-~~--~~~~~~~~~v~~~-------~~~~~~~~~L~~-~gi~~~~~~~~~~~~~~~~~rv 424 (447)
T PRK00451 356 QNHQKAHYLAERLAEIGGVE-LF--DGPFFNEFVVRLP-------KPAEEVNEALLE-KGILGGYDLGRYYPELGNHLLV 424 (447)
T ss_pred HHHHHHHHHHHHHhhcCCEE-ec--CCCeEEEEEEecC-------CCHHHHHHHHHh-cCCCCCcccccccCCcCCEEEE
Confidence 99999999999999987777 32 3444443 4443 146788888855 4665 34455443 2579999
Q ss_pred Eee--cCHHHHHHHHHHHHHHH
Q 014769 393 AFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 393 s~~--~~~~~l~~~l~~l~~~~ 412 (419)
++. .++++++++++.|++++
T Consensus 425 s~~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 425 CVTEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred ecCCCCCHHHHHHHHHHHHHHh
Confidence 994 68899999999998764
No 173
>PLN02242 methionine gamma-lyase
Probab=99.95 E-value=2e-25 Score=211.41 Aligned_cols=215 Identities=17% Similarity=0.172 Sum_probs=165.4
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH-----hhcCCEEEEE
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-----QRKQVEVRHF 158 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~ 158 (419)
+-..+|++.++++. +.+.+++++|+++|+..++.+++++||.|+++.|.|..+...+ +..|.+++.+
T Consensus 76 Pt~~~LE~~lA~l~--------g~~~~l~~~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~ 147 (418)
T PLN02242 76 PTVLNLGRQMAALE--------GTEAAYCTASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFV 147 (418)
T ss_pred hhHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEc
Confidence 45689999999987 2357789999999999999999999999999999998776544 2367776655
Q ss_pred eccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 159 DLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
+. .|++.+++++++ ++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|..+.+.. ..
T Consensus 148 d~-------~d~e~l~~~i~~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~gi~livDea~~~~~~~~------~~ 211 (418)
T PLN02242 148 DI-------TDLEAVKKAVVPGKTKVLYFESISNPTLTVAD---IPELARIAHEKGVTVVVDNTFAPMVLSP------AR 211 (418)
T ss_pred CC-------CCHHHHHHhcCcCCCEEEEEecCCCCCCcccC---HHHHHHHHHHhCCEEEEECCCCccCCCH------HH
Confidence 43 278999999987 4899999999999999997 8999999999999999999998655421 12
Q ss_pred cCCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc---cccCCchHHHHHHHHHHcccchHHHH
Q 014769 238 FGSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS---IYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
++ ..++++|+||.++++|.+ .||+++++ ++++.++.... ...++....|.|...+... ..+.
T Consensus 212 ~g---~divv~S~SK~l~g~g~~~gG~iv~~~--------~li~~l~~~~~~~~~~~g~~~~~~~A~l~~~~l---~tl~ 277 (418)
T PLN02242 212 LG---ADVVVHSISKFISGGADIIAGAVCGPA--------ELVNSMMDLHHGALMLLGPTMNPKVAFELSERL---PHLS 277 (418)
T ss_pred cC---CcEEEEeCccccCCCCCceEEEEEcCH--------HHHHHHHHHhhhhhhccCCCCCHHHHHHHHcCC---CcHH
Confidence 22 348899999999889987 58888754 56666665532 1234455556665544432 3455
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 314 KLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
.+.++++++++.+.+.|+++ ++.
T Consensus 278 ~r~~~~~~~a~~la~~L~~~-~~~ 300 (418)
T PLN02242 278 LRMKEHCRRAMEYAKRMKEL-GLK 300 (418)
T ss_pred HHHHHHHHHHHHHHHHHHhC-CCE
Confidence 66778899999999999987 344
No 174
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=1e-24 Score=208.28 Aligned_cols=334 Identities=13% Similarity=0.159 Sum_probs=219.3
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHh--CCCCCCC--CC------CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVR--SGKFNCY--AT------NSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~--~~~~~~Y--~~------~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
|-|..+.. .|+++.+++++.+.+. ....+.. .. .....++|+.+++++ +.++++|++++
T Consensus 5 iyld~a~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~------g~~~~~v~~~~ 73 (404)
T PRK14012 5 IYLDYSAT-----TPVDPRVAEKMMPYLTMDGTFGNPASRSHRFGWQAEEAVDIARNQIADLI------GADPREIVFTS 73 (404)
T ss_pred EEecCcCC-----CCCCHHHHHHHHHHHHhcccCcCCCchhhHHHHHHHHHHHHHHHHHHHHc------CcCcCeEEEeC
Confidence 45555543 2567888899888764 2111111 00 123457788888887 56778899999
Q ss_pred cHHHHHHHHHHHhc----CCCCeEEeeCCCCCCcHHHH---hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe
Q 014769 115 GCKQAVEVILSVLA----RPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187 (419)
Q Consensus 115 g~~~al~~~~~~l~----~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 187 (419)
|++++++.++.++. .+||.|++++++|+...... +..|.+++.++.++ ++.+|++.+++++++++++++++
T Consensus 74 g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~~~~~g~~~~~v~~~~--~g~~d~~~l~~~i~~~t~lv~~~ 151 (404)
T PRK14012 74 GATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLDPQS--NGIIDLEKLEAAMRDDTILVSIM 151 (404)
T ss_pred CHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHHHHhCCCEEEEEccCC--CCcCCHHHHHHhcCCCCEEEEEE
Confidence 99999999887764 68999999999998764433 34589988888753 45689999999999889999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
+++||||.+.| +++|.++|+++|+++|+|++++... ....+..++. .+++.|++|.++ |+ ++|+++++
T Consensus 152 ~~~n~tG~~~~---~~~I~~la~~~g~~vivD~a~~~g~----~~~~~~~~~~---D~~~~s~~K~~g-p~-g~G~l~~~ 219 (404)
T PRK14012 152 HVNNEIGVIQD---IAAIGEICRERGIIFHVDAAQSVGK----VPIDLSKLKV---DLMSFSAHKIYG-PK-GIGALYVR 219 (404)
T ss_pred CcCCCccchhh---HHHHHHHHHHcCCEEEEEcchhcCC----cccCcccCCC---CEEEEehhhccC-CC-ceEEEEEe
Confidence 99999999998 8899999999999999999998522 2222333333 267779999754 43 58999887
Q ss_pred CCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C---C
Q 014769 268 DPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-P---E 343 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p---~ 343 (419)
++......+.....-.......++++.....++.++++.. .....+..++.+..++++.+.|++++++..... + .
T Consensus 220 ~~~~~~~~~~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~ 298 (404)
T PRK14012 220 RKPRVRLEAQMHGGGHERGMRSGTLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVP 298 (404)
T ss_pred cCCCCCCCceecCCCccCCccCCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCC
Confidence 6421110000000000000012233444444444444432 234555677888888899998888766552211 1 1
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHH
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALK 402 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~ 402 (419)
..+++++.+. +..++...+ +++.+.+|..|.. .+.+|++++ +++++++
T Consensus 299 ~~~~~~~~~~--------~~~~~~~~l---~~~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~iRls~~~~~t~~dvd 367 (404)
T PRK14012 299 GNLNVSFNYV--------EGESLIMAL---KDLAVSSGSACTSASLEPSYVLRALGLNDELAHSSIRFSLGRFTTEEEID 367 (404)
T ss_pred CEEEEEEeCc--------CHHHHHHhC---CCeEEEchhhhCCCCCCCCHHHHHcCCChhhcCceEEEEecCCCCHHHHH
Confidence 2234454442 233444444 3677777655421 368999994 6899999
Q ss_pred HHHHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQRH 415 (419)
Q Consensus 403 ~~l~~l~~~~~~~ 415 (419)
.+++.|++++..+
T Consensus 368 ~~~~~l~~~~~~~ 380 (404)
T PRK14012 368 YAIELVRKSIGKL 380 (404)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999988765
No 175
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.95 E-value=6.8e-25 Score=207.05 Aligned_cols=290 Identities=14% Similarity=0.139 Sum_probs=197.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g 152 (419)
+.+|+++ ...+|++.++++. + .+..++++++++++..++.+++++||+|+++.|.|......+ ...|
T Consensus 55 y~r~~~p-t~~~Le~~lA~l~------G--~~~al~~~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~g 125 (386)
T PRK06767 55 YSRLGNP-TVKLFEERMAVLE------G--GEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFM 125 (386)
T ss_pred ccCCCCc-chHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcC
Confidence 4456554 4689999999998 3 234566666678999999999999999999999887654433 3345
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+.
T Consensus 126 i~~~~~~~-------~d~~~l~~~i~~~tklV~lesp~NptG~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~---- 191 (386)
T PRK06767 126 ITHSFCDM-------ETEADIENKIRPNTKLIFVETPINPTMKLID---LKQVIRVAKRNGLLVIVDNTFCSPYLQ---- 191 (386)
T ss_pred eEEEEeCC-------CCHHHHHHhhCcCceEEEEeCCCCCCceecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 55444432 3788999999888999999999999999999 889999999999999999999753322
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHH-hhhc-cccCCchHHHHHHHHHHcccch
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIK-DCLS-IYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
.++ ..+. .+++.|+||.++.+|.++ ||+++++ +.+..+. .... .....++..++++...|+
T Consensus 192 ~pl-~~g~---Div~~S~sK~l~g~g~~~gG~v~~~~--------~~i~~~~~~~~~~~g~~~~~~~a~l~~~~L~---- 255 (386)
T PRK06767 192 RPL-ELGC---DAVVHSATKYIGGHGDVVAGVTICKT--------RALAEKIRPMRKDIGGIMAPFDAWLLLRGLK---- 255 (386)
T ss_pred Cch-hcCC---cEEEecCcceecCCCCceeEEEEeCh--------HHHHHHHHHHHHHhCCCCCHHHHHHHHcCCC----
Confidence 112 1222 378889999998888885 8888765 3454443 2222 223345444444333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 379 (419)
.+..+.++.+++...+.+.|+++|++..+..|. .|-.+.+.++.. ..+..+|++.| +..++.++
T Consensus 256 -tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~~~----~~~~~~f~~~l-~~~~~~~s 329 (386)
T PRK06767 256 -TLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGG----KEETQAFINDL-HFITIAVS 329 (386)
T ss_pred -cHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEcCC----HHHHHHHHHhC-CccEEecC
Confidence 345566778899999999999998887554441 222444556421 11345676666 66676665
Q ss_pred cCCCCCC-----------------------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 380 PGIYVGL-----------------------KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 380 ~g~~~~~-----------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
-|..... ++.+|+|+|.+ +.+.+++.|.+++.
T Consensus 330 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE--~~~dl~~dl~~al~ 384 (386)
T PRK06767 330 LGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLE--SWEDIVSDLEQALK 384 (386)
T ss_pred CCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 5532210 35799999974 46667777777665
No 176
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.95 E-value=8e-25 Score=209.55 Aligned_cols=354 Identities=13% Similarity=0.069 Sum_probs=226.6
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|..+... -.-+|.+.+++.+++.+.... +....+.+ ....+++++....+.+. .++++++++++
T Consensus 37 d~dG~~~lD~~~g~~~~~l-Gh~~~~i~~a~~~~~~~~~~~-~~~~~~~~-~~~~la~~l~~~~~~~~-~~~~~f~~sGs 112 (425)
T PRK08088 37 DVEGREYLDFAGGIAVLNT-GHLHPKVVAAVEAQLKKLSHT-CFQVLAYE-PYLELCEKMNQKVPGDF-AKKTLLVTTGS 112 (425)
T ss_pred eCCCCEEEEcCCchhhcCC-CCCCHHHHHHHHHHHhhCCCc-cccccCCH-HHHHHHHHHHHhCCCCC-CCEEEEeCCcH
Confidence 3458889999988654321 235899999999998764322 22212223 34477777776544322 24778888888
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEE--------------EEeccCCCCcccC----hHHHHHhh
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVR--------------HFDLLPERNWEVD----LDAVEALA 177 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~--------------~~~~~~~~~~~~~----~~~l~~~~ 177 (419)
+|++.+++.... ....|+..+++|++....+...+.... ..+...+.+ ..+ ++.++..+
T Consensus 113 ea~e~Alklar~~~~r~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l 191 (425)
T PRK08088 113 EAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIF 191 (425)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCccCCccHHHHHhhCCCCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHH
Confidence 888877776532 235677779999987655554432211 011100000 111 44577766
Q ss_pred c----CCccEEEEeCC--CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCC
Q 014769 178 D----KNTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (419)
Q Consensus 178 ~----~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 251 (419)
. .+..+.+++.| ++++....+.+++++|.++|+++|+++|+||+|.++.+.+.. ..+...+ .+..+.|||
T Consensus 192 ~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~Dev~~g~g~~g~~-~~~~~~~---~~pdi~s~s 267 (425)
T PRK08088 192 KNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTL-FAMEQMG---VAADLTTFA 267 (425)
T ss_pred HhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcch-hHHhhcC---CCCCEEEEe
Confidence 4 23445666777 577777889999999999999999999999999987655432 1221222 223467999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 329 (419)
|.++ +|+|+||++++. ++++.+.... ..+++.+++.|.++..+|+... ++.+++.+...+.+++.+.+.
T Consensus 268 K~l~-~G~rig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~l 338 (425)
T PRK08088 268 KSIA-GGFPLAGVTGRA--------EVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQENLLQKANALGEKLKDGLLAI 338 (425)
T ss_pred cccc-CCCcceeeEecH--------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 9964 899999999975 5777776543 3456788999999999998743 234444444444444444443
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG 404 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~ 404 (419)
+...|.+..+ .. .|+++|+.+..... +.......+...+ .++||.+.|+..+ .+.+|++++ .++++|+++
T Consensus 339 ~~~~~~~~~v-~g-~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~iRl~~~~~~t~~ei~~~ 413 (425)
T PRK08088 339 AEKHPEIGDV-RG-LGAMIAIELFEDGDHSKPNAKLTAQIVARA-RDKGLILLSCGPY--YNVLRILVPLTIEDAQIRQG 413 (425)
T ss_pred HHhCCCeEEE-ec-cceEEEEEEecCCCCCCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCcCHHHHHHH
Confidence 3445443322 22 28889999842110 0001245566565 5679998886554 478999995 579999999
Q ss_pred HHHHHHHHHH
Q 014769 405 LGRMKAFCQR 414 (419)
Q Consensus 405 l~~l~~~~~~ 414 (419)
+++|++++++
T Consensus 414 i~~l~~~l~~ 423 (425)
T PRK08088 414 LEIIAQCFDE 423 (425)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 177
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=1.6e-24 Score=198.96 Aligned_cols=328 Identities=20% Similarity=0.169 Sum_probs=244.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC-C-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-K-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+++++||+.+| +..+..+|.+++++.++++.. . -.-++...-..+|++.+|+|+ ..+..++.+
T Consensus 38 ~~~~~nf~SNd---YLGLa~~~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~--------g~e~al~f~ 106 (388)
T COG0156 38 GRKVLNFCSND---YLGLASHPELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEELADFL--------GAEAALLFS 106 (388)
T ss_pred CceeEeeeccC---cccccCCHHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHHHHHHh--------CCCcEEEEc
Confidence 68899999998 456778899999999988762 1 112344444578889999987 346788888
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---C---ccEEEEeC
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---N---TAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~---~~~v~i~~ 188 (419)
++-.++..++.++++++|.|+.....|-+..+.++..+.+++.+.+ .|++.|++.+.+ . .+.|+...
T Consensus 107 SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~Ivteg 179 (388)
T COG0156 107 SGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKH-------NDLDHLEALLEEARENGARRKLIVTEG 179 (388)
T ss_pred ccchhHHHHHHHhcCCCcEEEEechhhhhHHHHHHhCCCcEEEecC-------CCHHHHHHHHHhhhccCCCceEEEEec
Confidence 8899999999999999999999999999999999999999888875 377888888765 1 34444445
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--CCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
.-...|.+.| |++|++++++|+.++++||+|+...++..+......+ ......|+++||||++|..| ||+.+
T Consensus 180 VfSMdGdiAp---L~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs~G---g~v~g 253 (388)
T COG0156 180 VFSMDGDIAP---LPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGSSG---GYIAG 253 (388)
T ss_pred cccCCCCcCC---HHHHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcccC---ceeeC
Confidence 6678999999 9999999999999999999999988875543333333 22334799999999999988 99998
Q ss_pred eCCCCccchhhHHHHHHhhh-cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769 267 NDPNGIFQKSGIIDSIKDCL-SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 343 (419)
+. .+++.++... .+ +.+.++....++.++++. -+...+.+++++++...+++.++.. ++. + .+.
T Consensus 254 ~~--------~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~--l~~~~~~r~~L~~~~~~~~~~~~~~-~~~-~-~~s 320 (388)
T COG0156 254 SA--------ALIDYLRNRARPFIFSTALPPAVAAAALAALRI--LEEGPERRERLQELAAFFRSLLKAL-GLV-L-LPS 320 (388)
T ss_pred cH--------HHHHHHHHhCCceeccCCCCHHHHHHHHHHHHH--HHhCHHHHHHHHHHHHHHHHHHHhc-CCc-c-CCC
Confidence 76 6888888763 32 334455555556666654 2345566778888888888666655 555 3 455
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEee--cCHHHHHHHHHHHHHH
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFC--AEPSALKDGLGRMKAF 411 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~--~~~~~l~~~l~~l~~~ 411 (419)
...++.+.+.+. ....++...|+++ ||.+.+...+..+ ..+|+++. .++++|+.+++.+.++
T Consensus 321 ~s~I~pv~~gd~-----~~a~~~s~~l~~~-Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 321 ESPIIPVILGDE-----ERALEASRALLEE-GIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred CCCeeeeEeCCH-----HHHHHHHHHHHHC-CeeEeeecCCCCCCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 555555555432 1256677777666 9999888777653 67999993 6899999999998764
No 178
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.94 E-value=3.1e-24 Score=202.82 Aligned_cols=223 Identities=21% Similarity=0.247 Sum_probs=159.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g 152 (419)
+.+|+.+ -..+|++.+|+++ +. +..+++++++.++..++.+++++||+|+++.|.|.++... +...|
T Consensus 59 y~r~~~p-~~~~Le~~lA~l~------G~--~~~~~~~sG~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G 129 (398)
T PRK07504 59 YSRYSNP-TVDMFEKRMCALE------GA--EDARATASGMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYG 129 (398)
T ss_pred eecCCCc-hHHHHHHHHHHHh------CC--CeeeEecCHHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcC
Confidence 3456553 4689999999987 33 3345577888999888888889999999999999875433 34567
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++ ..|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+.
T Consensus 130 ~~v~~vd-------~~d~e~l~~ai~~~tklV~lesp~NptG~v~d---l~~I~~la~~~gi~lvvD~a~a~~~~~---- 195 (398)
T PRK07504 130 IESTLVD-------GLDLDNWEKAVRPNTKVFFLESPTNPTLEVID---IAAVAKIANQAGAKLVVDNVFATPLFQ---- 195 (398)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCcEecC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence 7777764 26899999999889999999999999999999 889999999999999999999864432
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
.++ .++ ..+++.|+||.++.+|.++|++++.+++ .+.+.++... ......++...+.+...|+ .
T Consensus 196 ~~~-~~g---aDivv~S~sK~l~g~g~~~GG~vv~~~~------~i~~~~~~~~~~~g~~~s~~~A~~~l~~L~-----t 260 (398)
T PRK07504 196 KPL-ELG---AHIVVYSATKHIDGQGRCLGGVVLSDKA------WIEEHLQDYFRHTGPSLSPFNAWTLLKGLE-----T 260 (398)
T ss_pred Cch-hhC---CCEEEeeccccccCCccceEEEEEeCcH------HHHHHHHHHHHHhCCCCCHHHHHHHHhccc-----h
Confidence 111 222 2378999999999999999754443321 1223344332 2233344444444433333 3
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 312 FCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
+..+.++..++...+.+.|+++|++.
T Consensus 261 l~~R~~~~~~na~~la~~L~~~p~v~ 286 (398)
T PRK07504 261 LPVRVRQQTESAAAIADFLAGHPKVA 286 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 56666667788888888888776654
No 179
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=1.6e-24 Score=203.59 Aligned_cols=295 Identities=16% Similarity=0.168 Sum_probs=203.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhc
Q 014769 76 KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRK 151 (419)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~ 151 (419)
.+.+|+++ ....|++++|++. + .+++++++|+++++..++.+++++||+|++++|+|.+....+ ...
T Consensus 45 ~Y~R~~~p-t~~~L~~~lA~l~------g--~~~~i~~~sg~~Ai~~~l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~ 115 (386)
T PRK08045 45 DYSRRGNP-TRDVVQRALAELE------G--GAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRG 115 (386)
T ss_pred eeeCCCCc-cHHHHHHHHHHHh------C--CCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhC
Confidence 35566664 5689999999987 2 246999999999999999999999999999999998643322 223
Q ss_pred CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769 152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231 (419)
Q Consensus 152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 231 (419)
+.++..++ ..|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.....
T Consensus 116 gi~v~~vd-------~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~d---i~~I~~ia~~~g~~vivDeay~~~~~---- 181 (386)
T PRK08045 116 CYRVLFVD-------QGDEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREAGAVSVVDNTFLSPAL---- 181 (386)
T ss_pred CeEEEEeC-------CCCHHHHHHhcccCCeEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----
Confidence 34554442 25789999999888999999999999999999 78889999999999999999986432
Q ss_pred CCCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch
Q 014769 232 YTPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 232 ~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
..++ .++.+ +++.|++|.++. ++.+.|++++.++ ++.+.++... ......++..++.+...|+.
T Consensus 182 ~~pl-~~gaD---ivv~S~tK~l~G~~d~~~G~vi~~~~-------~~~~~l~~~~~~~g~~~~p~~~~l~~rgl~t--- 247 (386)
T PRK08045 182 QNPL-ALGAD---LVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLRT--- 247 (386)
T ss_pred CCch-hhCCC---EEEeecceeccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhcc---
Confidence 1222 22332 889999999763 4578999887542 4666665443 33456677777777777764
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKE 373 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 373 (419)
+..+.++..+++..+.+.|+.+|.+..|..|. .|-.+.+.++.. ......|++.| +-
T Consensus 248 --l~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~----~~~~~~f~~~l-~~ 320 (386)
T PRK08045 248 --LVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD----EQTLRRFLGGL-SL 320 (386)
T ss_pred --HHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCc----HHHHHHHHHhc-cc
Confidence 77778888899999999999877654343331 233444556421 01123444444 32
Q ss_pred cCeEeecCCCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 374 ESVIVTPGIYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 374 ~gv~v~~g~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
..+.++-|... |. ++.+|||+|.+ +.+.+++.|.+++++..
T Consensus 321 ~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~~~ 384 (386)
T PRK08045 321 FTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIE--DGEDLIADLENGFRAAN 384 (386)
T ss_pred eeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcC--CHHHHHHHHHHHHHHhh
Confidence 22222222211 00 35899999974 56677777777776544
No 180
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.94 E-value=2e-24 Score=204.18 Aligned_cols=339 Identities=14% Similarity=0.102 Sum_probs=217.6
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHhC-C-----CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-G-----KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~-----~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
+||+..+ +..+..+|+++++..++++. + ....|+...+..+|++.+|+++. . .+.+++++|.++
T Consensus 1 ~~f~s~d---yLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~lA~~~g------~-e~al~~~sG~~a 70 (392)
T PLN03227 1 LNFATHD---FLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQCMAEFLG------T-ESAILYSDGAST 70 (392)
T ss_pred CCCcCcC---ccCCCCCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHHHHHHhC------C-CcEEEecCcHHH
Confidence 3566665 34577889999999998864 1 12247766678899999999983 2 355666666665
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-----------CCccEEEEe
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-----------KNTAAMVII 187 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----------~~~~~v~i~ 187 (419)
.. .++.+++++||.|+++++.|.++...+...+.++..++... .-+++.+.+.+. +++++|++.
T Consensus 71 ~~-~~i~~l~~~GD~Vl~~~~~h~s~~~~~~l~~~~~~~~~~~d----~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E 145 (392)
T PLN03227 71 TS-STVAAFAKRGDLLVVDRGVNEALLVGVSLSRANVRWFRHND----MKDLRRVLEQVRAQDVALKRKPTDQRRFLVVE 145 (392)
T ss_pred HH-HHHHHhCCCCCEEEEeccccHHHHHHHHHcCCeEEEeCCCC----HHHHHHHHHHhhhhccccccccCCCcEEEEEc
Confidence 55 77777899999999999999988877777777777665421 113333333332 246777888
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc--cC-CCCcEEEEecCCCcCCCCCceeEEE
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL--FG-SIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
.+.||+|.+.| ++++.++|+++|+++|+||+|+...++..+...... .. ..+..+++.|+||.++.. .|++
T Consensus 146 ~v~~~~G~i~~---l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~g~~---gg~v 219 (392)
T PLN03227 146 GLYKNTGTLAP---LKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAFGSV---GGMT 219 (392)
T ss_pred CCcCCCCcccC---HHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhhhcc---CcEE
Confidence 88999999999 889999999999999999999843332211111111 11 122358888999986544 4888
Q ss_pred EeeCCCCccchhhHHHHHHhhh-ccccCC--chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCL-SIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN- 340 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~- 340 (419)
+++. ++++.++... ...++. ++..+.++...+.... ..++..++++++.+++++.|++. ++..+.
T Consensus 220 ~~~~--------~~~~~~~~~~~~~~~~~~~~p~~~~aa~~al~~~~--~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~ 288 (392)
T PLN03227 220 VGSE--------EVVDHQRLSGSGYCFSASAPPFLAKADATATAGEL--AGPQLLNRLHDSIANLYSTLTNS-SHPYALK 288 (392)
T ss_pred ecCH--------HHHHHHHHhCcCccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHhc-CCccccc
Confidence 7754 4666665432 222222 3545555555554321 13456777888888888888752 221111
Q ss_pred --------CCCceEEEEeecCcccccC-CC---CHHHHHHHHHHhcCeEeecCC-------CCCCCCeEEEEe--ecCHH
Q 014769 341 --------KPEGSMVTMVKLNPWLLED-IN---DDIEFALKLAKEESVIVTPGI-------YVGLKNWLRIAF--CAEPS 399 (419)
Q Consensus 341 --------~p~~g~~~~~~~~~~~~~~-~~---~~~~~~~~ll~~~gv~v~~g~-------~~~~~~~~Ris~--~~~~~ 399 (419)
....++++.+.+.+..... .. ...++...+ .++|+.+.+.. .+..+..+|+++ ..++|
T Consensus 289 ~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gi~~~~~~~~~~~~~~~~P~~~iR~~~~~~~t~e 367 (392)
T PLN03227 289 LRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHS-LSEGVAVVSTGGHVKKFLQLVPPPCLRVVANASHTRE 367 (392)
T ss_pred cccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHH-HHCCCEEEecccccCCcCCCCCCceEEEEecCCCCHH
Confidence 1123445556664311000 00 013555555 56799986522 122356789999 46999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014769 400 ALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~~ 416 (419)
+|+++++.|++++++..
T Consensus 368 ei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 368 DIDKLLTVLGEAVEAIL 384 (392)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998764
No 181
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=3.8e-24 Score=202.12 Aligned_cols=222 Identities=17% Similarity=0.169 Sum_probs=162.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g 152 (419)
+.+|+++ ....|++.++++. +. .+. ++++++++++..++.++.++||.|+++.|+|.+ +...+...|
T Consensus 54 y~R~~~p-~~~~Le~~lA~l~------g~-~~~-v~~~sG~~Ai~~~l~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g 124 (405)
T PRK08776 54 YTRSGNP-TRDLLGEALAELE------GG-AGG-VITATGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGH 124 (405)
T ss_pred ccCCCCh-HHHHHHHHHHHHh------CC-Cce-EEEcCHHHHHHHHHHHHhCCCCEEEEccCCchHHHHHHHHHHHhcC
Confidence 3445543 3568888888876 22 334 555556899999999999999999999999986 344455567
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
.++..++. .|++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.... ..
T Consensus 125 ~~v~~v~~-------~d~~~l~~~i~~~tklV~l~~P~NPtG~v~d---l~~I~~la~~~gi~vIvD~a~a~~~----~~ 190 (405)
T PRK08776 125 FALITADL-------TDPRSLADALAQSPKLVLIETPSNPLLRITD---LRFVIEAAHKVGALTVVDNTFLSPA----LQ 190 (405)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCCcccc----cC
Confidence 77776653 3788999988888999999999999999987 8999999999999999999997522 12
Q ss_pred CCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++ .++.+ +++.|.+|.++.+ +...|+++++++ ++.+++...... ....++..+.++...+ +
T Consensus 191 ~pl-~~gaD---ivv~S~tK~l~g~~~~~~G~vv~~~~-------~l~~~l~~~~~~~g~~~s~~~a~l~~~gl-----~ 254 (405)
T PRK08776 191 KPL-EFGAD---LVLHSTTKYINGHSDVVGGAVVARDA-------ELHQQLVWWANALGLTGSPFDAFLTLRGL-----R 254 (405)
T ss_pred Ccc-cccCC---EEEecCceeecCCCCceEEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----C
Confidence 222 23333 8889999998766 477898887542 466666544322 3345666665555444 4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
+++.+.++..++...+.+.|+++|.+.
T Consensus 255 tl~~r~~~~~~na~~la~~L~~~p~v~ 281 (405)
T PRK08776 255 TLDARLRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCee
Confidence 477788888999999999998876554
No 182
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.94 E-value=2.2e-24 Score=202.54 Aligned_cols=227 Identities=16% Similarity=0.168 Sum_probs=165.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g 152 (419)
+.+|+++ -..+|+++++++. + .+++++++|+++++..++.+++++||.|+++.|+|.+....+ ...+
T Consensus 45 Y~R~~~p-~~~~le~~lA~l~------g--~~~v~~~~gg~~Ai~~~l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~ 115 (382)
T TIGR02080 45 YSRSGNP-TRDLLQQALAELE------G--GAGAVVTNTGMSAIHLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGC 115 (382)
T ss_pred ccCCCCc-hHHHHHHHHHHHh------C--CCcEEEEcCHHHHHHHHHHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcC
Confidence 5567654 4689999999987 2 468999999999999999999999999999999998644333 2223
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
..+..++ ..|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..+...
T Consensus 116 ~~v~~~d-------~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~---- 181 (382)
T TIGR02080 116 FRVLFVD-------QGDEQALRAALAQKPKLVLIETPSNPLLRVVD---IAKICHLAKAVGAVVVVDNTFLSPALQ---- 181 (382)
T ss_pred eEEEEEC-------CCCHHHHHHhcCcCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 4444432 13789999999888999999999999999999 788999999999999999999864322
Q ss_pred CCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++ .++. .++++|+||.++. ++++.|+++++++ ++.++++..... ....++...+.+..-+ +
T Consensus 182 ~pl-~~ga---Divv~S~sK~l~G~~~~~~G~i~~~~~-------~~~~~l~~~~~~~g~~~sp~~a~l~lr~l-----~ 245 (382)
T TIGR02080 182 NPL-ALGA---DLVLHSCTKYLNGHSDVIAGAVIAKDP-------QVAEELAWWANNLGVTGGAFDSYLTLRGL-----R 245 (382)
T ss_pred Cch-hhCC---CEEEeecceeccCCCCceeEEEEeCCH-------HHHHHHHHHHHccCCCCCHHHHHHHHccc-----c
Confidence 122 1222 2888999998764 6789999887552 466777665543 3445555544443222 3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
.+..+.++..++...+.+.|+.+|.+..|..|
T Consensus 246 tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP 277 (382)
T TIGR02080 246 TLVARMRLQQRNAQAIVEYLQTQPLVKKIYYP 277 (382)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCeeEEECC
Confidence 35555667778888889999877655433333
No 183
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.94 E-value=4.6e-24 Score=204.77 Aligned_cols=339 Identities=13% Similarity=0.063 Sum_probs=214.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
..+.++|..+.. ++++.+++++...+......+++ ...-...+.+...+.+.+.+| .+..+|++++
T Consensus 24 ~~~~~~l~~~~n------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la~~~g--~~~~~i~~~s 95 (416)
T PRK00011 24 QEEHIELIASEN------FVSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--AEYANVQPHS 95 (416)
T ss_pred HhcCeeeecccC------cCCHHHHHHHhchhhcccccCCCCccccccchHHHHHHHHHHHHHHHHhC--CCceeeecCC
Confidence 567789888852 36788988887664321100111 111122333312223333333 4455666655
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH-----HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeC
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEG-----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~ 188 (419)
+++++..++.+++++||+|+++.|+|.++.. .+...|.+++.+++++ .++.+|++++++++++ +++++++++
T Consensus 96 -gt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~k~v~~~~ 173 (416)
T PRK00011 96 -GSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDE-ETGLIDYDEVEKLALEHKPKLIIAGA 173 (416)
T ss_pred -chHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCc-ccCCcCHHHHHHHHHhcCCCEEEECC
Confidence 4779999999999999999999999975421 1223356677766643 2467999999999864 678888776
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
+++| ...+ +++|.++|+++|+++|+|++|... .+.+.....+. . ..++++|+||++ +|+|.||++++
T Consensus 174 ~~~~--~~~~---~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~--~---~di~~~S~~K~l--~g~~gg~i~~~ 241 (416)
T PRK00011 174 SAYS--RPID---FKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP--H---ADVVTTTTHKTL--RGPRGGLILTN 241 (416)
T ss_pred CcCC--CccC---HHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC--C---CcEEEecCCcCC--CCCCceEEEeC
Confidence 5554 4456 899999999999999999998642 22222122222 1 237789999974 78899999986
Q ss_pred CCCCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769 268 DPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
++ ++.+.++..... ..++....+.++..++.....+++++..++++++++.+.+.|+++ |+.+......+
T Consensus 242 ~~-------~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 313 (416)
T PRK00011 242 DE-------ELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDN 313 (416)
T ss_pred CH-------HHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCC
Confidence 42 466777655422 122223333333333332223456788889999999999999987 77632111234
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC-C-----CCCCeEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY-V-----GLKNWLRIAF------CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-----~~~~~~Ris~------~~~~~~l~~~l~~l~~~~~ 413 (419)
+++|+.+++.. .+..++.. .|+++||.+..+.. + ..+..+|++. +.++++++.+++.|++++.
T Consensus 314 ~~~~i~~~~~~----~~~~~~~~-~L~~~GI~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~ 388 (416)
T PRK00011 314 HLVLVDLRSKG----LTGKEAEA-ALEEANITVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLD 388 (416)
T ss_pred eEEEEeCcccC----CCHHHHHH-HHHHcCcEEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHh
Confidence 88888885321 13455554 45788999974321 1 1245799965 3468999999999998865
Q ss_pred H
Q 014769 414 R 414 (419)
Q Consensus 414 ~ 414 (419)
.
T Consensus 389 ~ 389 (416)
T PRK00011 389 N 389 (416)
T ss_pred c
Confidence 4
No 184
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.94 E-value=3.8e-24 Score=201.89 Aligned_cols=219 Identities=19% Similarity=0.228 Sum_probs=161.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~ 160 (419)
-..++++.+++++ +.+++++++|+++|+..++.+++++||+|+++.+.|.+.. ..+...|++++.+++
T Consensus 62 ~~~~le~~la~l~--------g~~~~v~~ssG~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 133 (390)
T PRK08133 62 TVTMFQERLAALE--------GAEACVATASGMAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDL 133 (390)
T ss_pred HHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECC
Confidence 4678999999987 2357899999999999999999999999999999997643 345668988888765
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
+ |++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++ ..+.
T Consensus 134 ~-------d~~~l~~~i~~~tklV~ie~p~NptG~v~d---l~~I~~la~~~gi~livD~t~~~~~~~----~pl-~~g~ 198 (390)
T PRK08133 134 T-------DLDAWRAAVRPNTKLFFLETPSNPLTELAD---IAALAEIAHAAGALLVVDNCFCTPALQ----QPL-KLGA 198 (390)
T ss_pred C-------CHHHHHHhcCcCCeEEEEECCCCCCCCcCC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hhCC
Confidence 2 678899999888999999999999999998 899999999999999999998754321 111 2222
Q ss_pred CCcEEEEecCCCcCCCCCceeEE-EEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 318 (419)
.+++.|+||.++.+|.++|+ +++++ ++++.+..... .....++..+. .++.. -+.+..+.++
T Consensus 199 ---Divv~S~sK~~~g~g~~~GG~vv~~~--------~~~~~~~~~~~~~g~~~~~~~a~---~~l~g--l~tl~~R~~~ 262 (390)
T PRK08133 199 ---DVVIHSATKYLDGQGRVLGGAVVGSK--------ELMEEVFGFLRTAGPTLSPFNAW---VFLKG--LETLSLRMEA 262 (390)
T ss_pred ---cEEEeecceeecCCcceEeEEEEcCH--------HHHHHHHHHHHHhCCCCCHHHHH---HHHcc--cchHHHHHHH
Confidence 37899999999889999854 55433 34555544332 22233433333 23332 2346666677
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 319 LRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
..++...+.+.|++.|++..+..|
T Consensus 263 ~~~~a~~la~~L~~~p~v~~v~yp 286 (390)
T PRK08133 263 HSANALALAEWLEAHPGVERVFYP 286 (390)
T ss_pred HHHHHHHHHHHHHhCCCeeEEECC
Confidence 778888999999887765544333
No 185
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.94 E-value=3.9e-24 Score=204.29 Aligned_cols=333 Identities=14% Similarity=0.105 Sum_probs=221.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+|+.++||..|..+.. .-.-+|.+.+++.++++...... +.......++.+.++++. ..+.++++++++
T Consensus 38 ~~g~~~lD~~~~~~~~~-~Gh~~~~i~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------~~~~~~~~~SGs 108 (401)
T PRK00854 38 TDGNRYLDCLSAYSAVN-QGHCHPKILAAMVEQAGRLTLTSRAFRNDQLAPLYEELAALT--------GSHKVLPMNSGA 108 (401)
T ss_pred CCCCEEEEcCcchhhcc-CCCCCHHHHHHHHHHHhhccccccccCCHHHHHHHHHHHhhC--------CCCEEEEeCCcH
Confidence 35788999888743211 11247899999999987643211 112223445666666654 235899999999
Q ss_pred HHHHHHHHHhcC---------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHH
Q 014769 118 QAVEVILSVLAR---------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 118 ~al~~~~~~l~~---------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~ 174 (419)
+|++.+++.+.. +| ++|++...+|++....+...+.. +..++ -.|++.++
T Consensus 109 ~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le 181 (401)
T PRK00854 109 EAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALE 181 (401)
T ss_pred HHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCccccccCCCCCCCeEEeC-------CCCHHHHH
Confidence 999999998852 23 68898888888764433332221 11111 13789999
Q ss_pred HhhcCCccEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769 175 ALADKNTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR 253 (419)
Q Consensus 175 ~~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 253 (419)
+.+.+++++|++.+|+||+|.+++ .+++++|.++|++||+++|+||+|.++.+.|.... ....+....+++ ++|.
T Consensus 182 ~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~-~~~~g~~~D~~~---~~K~ 257 (401)
T PRK00854 182 AAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLA-EEHEGIEADVTL---IGKA 257 (401)
T ss_pred HHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhH-HhhcCCCCCEEE---eccc
Confidence 999888899999999999999887 56799999999999999999999987655543211 111111112232 4699
Q ss_pred CCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
++...+|+|++++++ ++++.++... ..+++.+++.+.++.+.|+.... ....++++++.+.+.+.|++
T Consensus 258 l~gg~~~ig~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~ 326 (401)
T PRK00854 258 LSGGFYPVSAVLSNS--------EVLGVLKPGQHGSTFGGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRS 326 (401)
T ss_pred ccCCccCeEEEEEcH--------HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHh
Confidence 755447999999976 5666665432 23455688888888888865221 23567778888888888887
Q ss_pred CCCCCCC--CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769 333 IPCISCP--NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM 408 (419)
Q Consensus 333 ~~~~~~~--~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l 408 (419)
+ +...+ ..+.+.++. +.+.... .+..+++..|+ ++||.+.+.. .+++|+++ ..++++|++++++|
T Consensus 327 ~-~~~~~~~~~g~g~~~~-i~~~~~~----~~~~~~~~~L~-~~GV~v~~~~----~~~lR~~p~~~~t~e~i~~~i~~l 395 (401)
T PRK00854 327 I-RSNIVREVRGRGLMLA-VELEPEA----GGARQYCEALK-ERGLLAKDTH----DHTIRLAPPLVITREQVDWALEQI 395 (401)
T ss_pred h-ccCceEEEeccceEEE-EEEecCc----hhHHHHHHHHH-HCCeEEecCC----CCEEEEeCCcccCHHHHHHHHHHH
Confidence 6 22211 123344444 3342110 13567777775 4699987532 47999997 46899999999999
Q ss_pred HHHHH
Q 014769 409 KAFCQ 413 (419)
Q Consensus 409 ~~~~~ 413 (419)
++++.
T Consensus 396 ~~~l~ 400 (401)
T PRK00854 396 AKVLA 400 (401)
T ss_pred HHHhh
Confidence 98764
No 186
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=2.9e-24 Score=202.65 Aligned_cols=219 Identities=15% Similarity=0.163 Sum_probs=162.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCE
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVE 154 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~ 154 (419)
+|+. +-..++++.++++. + .+..++++++++|+..++.+++++||.|+++.|+|.+.. ..+...|++
T Consensus 60 r~~~-p~~~~le~~lA~l~------g--~~~~i~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~ 130 (398)
T PRK08249 60 RNTN-PTVQAFEEKVRILE------G--AEAATAFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVD 130 (398)
T ss_pred CCCC-hHHHHHHHHHHHHh------C--CCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeE
Confidence 3444 45689999999997 2 346777788899999999999999999999999998653 334567877
Q ss_pred EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
+..++. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...... +
T Consensus 131 v~~vd~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~v~d---l~~I~~la~~~gi~livD~t~a~~~~~~----~ 196 (398)
T PRK08249 131 VTLCET-------GDHEQIEAEIAKGCDLLYLETPTNPTLKIVD---IERLAAAAKKVGALVVVDNTFATPINQN----P 196 (398)
T ss_pred EEEcCC-------CCHHHHHHhcCCCCeEEEEECCCCCCCccCC---HHHHHHHHHHcCCEEEEECCcCccccCC----c
Confidence 766542 4889999999888999999999999999999 8889999999999999999998644221 1
Q ss_pred ccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHH
Q 014769 235 MGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
+ ..+.+ +++.|+||.++.+|.++ |+++++. ++++.++..... ....++..++.+...++ .+
T Consensus 197 l-~~~~D---ivv~S~sK~l~g~~~~~gG~vv~~~--------~l~~~l~~~~~~~g~~~s~~~a~l~l~~l~-----tL 259 (398)
T PRK08249 197 L-ALGAD---LVIHSATKFLSGHADALGGVVCGSK--------ELMEQVYHYREINGATMDPMSAYLILRGMK-----TL 259 (398)
T ss_pred h-hhCCC---EEeccCceecCCCCCceEEEEECCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhCcc-----hH
Confidence 2 12222 78899999988778776 5555432 567777655442 33455555554444333 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
..+.++..+++..+.+.|+++|.+.
T Consensus 260 ~~R~~~~~~na~~la~~L~~~p~v~ 284 (398)
T PRK08249 260 KLRVRQQQESAMALAKYLQTHPKVE 284 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCee
Confidence 5666777888888899998766544
No 187
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.94 E-value=4.3e-24 Score=199.93 Aligned_cols=295 Identities=15% Similarity=0.135 Sum_probs=199.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g 152 (419)
+.+|+.+ ....|++++|++. +.+++++++|+++++..++.+++++||.|+++.|+|.+.... ....|
T Consensus 47 Y~R~~np-t~~~Le~~lA~le--------g~e~ivvt~gg~~Ai~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~g 117 (388)
T PRK08861 47 YTRSGNP-NRGLLEQTLSELE--------SGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGD 117 (388)
T ss_pred ccCCCCc-hHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCC
Confidence 4556653 5789999999997 258999999999999999999999999999999999864332 23345
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|....+.
T Consensus 118 i~v~~vd~-------~d~e~l~~~i~~~tklV~lesP~NPtG~v~d---l~~I~~la~~~gi~vIvDea~~~~~~~---- 183 (388)
T PRK08861 118 FKVQFVDQ-------SDAAALDAALAKKPKLILLETPSNPLVRVVD---IAELCQKAKAVGALVAVDNTFLTPVLQ---- 183 (388)
T ss_pred eEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccccC----
Confidence 66666541 4789999999888999999999999999999 788899999999999999999864332
Q ss_pred CCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++ .++.+ +++.|++|.++.+ +...|+++++++ ++.+.++..... ....++...+.+..-|+.
T Consensus 184 ~pl-~~GaD---ivv~S~tK~l~G~~d~~gG~i~~~~~-------~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~T---- 248 (388)
T PRK08861 184 KPL-ELGAD---FVIHSTTKYINGHSDVIGGVLITKTK-------EHAEELAWWGNCIGATGTPFDSYMTLRGIRT---- 248 (388)
T ss_pred CCc-ccCCC---EEEeecceeccCCCcceeEEEEecHH-------HHHHHHHHHHhccCCCCChHHHHHHHhcCCC----
Confidence 122 23333 8899999997764 467898887542 455666654432 344455555544444433
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (419)
+.-+.++..++...+.+.|+.+|.+..|..|. .|-.+.+.+... ......|++.| +-.
T Consensus 249 -l~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~----~~~~~~f~~~l-~l~ 322 (388)
T PRK08861 249 -LGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGS----FEQLKVFVKAL-ALF 322 (388)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCC----HHHHHHHHhcC-Ccc
Confidence 55566677788888888998877654343332 233445556421 01123343333 222
Q ss_pred CeEeecCCCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769 375 SVIVTPGIYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 375 gv~v~~g~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+.++-|... |. ++.+|+|+|.+ +.+.+++.|++++++.++
T Consensus 323 ~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE--~~~dli~Dl~~al~~~~~ 386 (388)
T PRK08861 323 SLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLE--DAQDLIADLDQAFAKAAE 386 (388)
T ss_pred eEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcC--CHHHHHHHHHHHHHHHHh
Confidence 2222222110 00 35799999974 566677777777776554
No 188
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.94 E-value=8.1e-24 Score=200.07 Aligned_cols=335 Identities=12% Similarity=0.119 Sum_probs=229.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~ 117 (419)
.+|+.+|||..|.-.. .++.+|++.+++.+++.... .+.. ....++++.+++.+.. .++ .++++++++
T Consensus 26 ~dg~~~lD~~s~~~~~--~lG~~p~v~~a~~~~~~~~~--~~~~-~~~~~~~~~la~~l~~------~~~~~~~~~~SGs 94 (375)
T PRK04260 26 TDGKKYLDFSSGIGVT--NLGFHPQVQQALQKQAGLIW--HSPN-LYLNSLQEEVAQKLIG------DKDYLAFFCNSGA 94 (375)
T ss_pred CCCCEEEECCCCcccc--cCCCCHHHHHHHHHHHHhcC--cccC-ccCCHHHHHHHHHHhc------CcCCEEEEcCccH
Confidence 4588899998874322 24558889999999986532 2222 2346788899987732 233 468999999
Q ss_pred HHHHHHHHHhc--CCCCeEEeeCCCCCCcH-HHHhhcCCEEEE--Ee-ccCCCC--cccChHHHHHhhcCCccEEEEeCC
Q 014769 118 QAVEVILSVLA--RPGANVLLPRPGWPYYE-GIAQRKQVEVRH--FD-LLPERN--WEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 118 ~al~~~~~~l~--~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~--~~-~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
+++..+++... .++++|++.+.+|++.. ..+...+.+... +. ...... .-.|++.+++.++++..++++..+
T Consensus 95 eA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~~a~vi~e~v 174 (375)
T PRK04260 95 EANEAAIKIARKATGKQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKNTAAVMLELV 174 (375)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCCeEEEEECCe
Confidence 99998888763 24578999999988643 222222211100 00 000000 013788898888766677778888
Q ss_pred CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 190 GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 190 ~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+|++|.. .+.+.++++.++|+++|+++|+||+|.++...+..+ .....+..++ +.||||.+ .+|+|+||+++++
T Consensus 175 ~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~-~~~~~~~~pd---i~t~sK~l-~~G~~ig~~~~~~ 249 (375)
T PRK04260 175 QGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLY-AFEHYGIEPD---IFTLAKGL-ANGVPVGAMLAKS 249 (375)
T ss_pred ECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchh-hhHhhCCCCC---EEEecccc-cCCcceEEEEEcH
Confidence 9999986 457889999999999999999999998876555322 2112222222 23899996 4799999999976
Q ss_pred CCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769 269 PNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM 346 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 346 (419)
++.+.+... ...+++.+++.+.++.++|+... .+..++.++..+..++.+.+.+.+.+.+. . .+..|+
T Consensus 250 --------~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~-~~~~g~ 319 (375)
T PRK04260 250 --------SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKALQDKETVT-T-VRGLGY 319 (375)
T ss_pred --------HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhhCCCee-E-Eeccce
Confidence 566666543 22356678888999988887643 35566666777777777777776654333 1 345799
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAF 411 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~ 411 (419)
++|++++. +..++..++ .++||.+.|+. .+.+|+++ ..+++++++++++|+++
T Consensus 320 ~~~~~~~~-------~~~~~~~~l-~~~Gi~v~~~~----~~~lR~~~~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 320 MIGIETTA-------DLSQLVEAA-RDKGLIVLTAG----TNVIRLLPPLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEEEEecC-------cHHHHHHHH-HhCCCEEecCC----CCEEEEcCCCccCHHHHHHHHHHHHHh
Confidence 99998842 356676666 56799998752 47899999 35899999999999875
No 189
>PRK06460 hypothetical protein; Provisional
Probab=99.94 E-value=4.7e-24 Score=200.30 Aligned_cols=221 Identities=15% Similarity=0.142 Sum_probs=158.0
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCC----CcHHHHhhcCCEEEEE
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP----YYEGIAQRKQVEVRHF 158 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~----~~~~~~~~~g~~~~~~ 158 (419)
.....+|+++++++. +.+ ..+++ +++++++..++.+++++||+|+++.|.|. .+...++..|.++..+
T Consensus 44 ~p~~~~L~~~lA~l~------g~~-~~v~~-~sG~~ai~~~l~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~ 115 (376)
T PRK06460 44 NPTVLELTKKIVELE------NAE-MGVAF-SSGMGAISTTALALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDAS 115 (376)
T ss_pred CccHHHHHHHHHHHh------CCC-cEEEe-CCHHHHHHHHHHHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEE
Confidence 357789999999998 332 34444 55579999999999999999999987664 3456677889888776
Q ss_pred eccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+.+ +.+.++..+++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|.... ...++ ..
T Consensus 116 ~~~-------~~~~l~~~~~~~tklV~l~sp~NPtG~v~d---~~~I~~la~~~g~~vivDea~~~~~----~~~~l-~~ 180 (376)
T PRK06460 116 NPG-------SDNIIEKAKSKRYDVVFVENITNPLLRVVD---ITELSKVCKENGSILIVDATFSTPI----NQKPL-EL 180 (376)
T ss_pred CCC-------CHHHHHHhcCCCceEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCcCccc----cCChh-hc
Confidence 642 223445555667899999999999999999 6778999999999999999997532 11111 11
Q ss_pred CCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
+..+++.|+||.++.. +.++||++++. ++++.++..... ....++. .+..++.. .++++.+.
T Consensus 181 ---~~divv~S~sK~l~G~~~~~~G~~~~~~--------~l~~~l~~~~~~~g~~~~~~---~a~~~l~~--~~~l~~r~ 244 (376)
T PRK06460 181 ---GADIVVHSASKFLAGHNDVIAGLAAGYG--------KLLNVIDQMRRTLGTSLDPH---AAYLTLRG--IKTLKIRM 244 (376)
T ss_pred ---CCCEEEeecceeccCCCCceEEEEecCH--------HHHHHHHHHHHhcCCCCCHH---HHHHHHhc--hhhHHHHH
Confidence 2358899999987533 36899998754 577777765432 2223332 23333332 46788888
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 317 DTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
+++.++++.+.+.|+++|.+..+..|
T Consensus 245 ~~~~~n~~~l~~~L~~~p~v~~v~yp 270 (376)
T PRK06460 245 DVINRNAEQIAEFLEGHPKVVKVYYP 270 (376)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECC
Confidence 89999999999999987765434343
No 190
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=99.94 E-value=8.1e-26 Score=195.12 Aligned_cols=376 Identities=17% Similarity=0.186 Sum_probs=270.2
Q ss_pred ccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 014769 11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPA 89 (419)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~l 89 (419)
++|++.+.++++++|.++++.+. ++.+++.|||+.|.-......| +-+.|++|-...+.......|.|..|++++
T Consensus 25 ~s~~s~V~maPpDpILGVTeAfk----~D~n~~KiNLgvGaYRdd~gKp~vL~~VrkAE~ql~~~~ldKEYlpI~Gl~eF 100 (427)
T KOG1411|consen 25 SSWWSHVEMAPPDPILGVTEAFK----KDPNPKKINLGVGAYRDDNGKPYVLPSVRKAEQQLASLSLDKEYLPITGLAEF 100 (427)
T ss_pred cchhhcCCCCCCCCcccHHHHHh----cCCCcceeeecccceecCCCCeeeeHHHHHHHHHHhhhcccchhccccchHHH
Confidence 36788888999999999998654 4568899999999433222223 457777776655544445689999999999
Q ss_pred HHHHHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769 90 RRAIADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 90 r~~ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (419)
.+..++++.......+..++|+. |-++|.++......+.. ++..|.+++|+|..+..+++..|+.+..+.......
T Consensus 101 ~k~sakLa~G~~s~~ik~~Ri~tvQ~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~~if~~ag~~~~~yrYyd~~t 180 (427)
T KOG1411|consen 101 NKLSAKLALGDNSPVIKEKRIVTVQTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHKNIFKDAGLPVKFYRYYDPKT 180 (427)
T ss_pred HHHHHHHhhcCCchhhhccceeEEEeccCcchhhHHHHHHHhhccccceeecCCcccccCccccccCcceeeeeeccccc
Confidence 99999998543333345566644 67889999888877754 789999999999999999999999988777655555
Q ss_pred cccChHHHHHhhcCCc-cEEEEe--CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCcccc-C
Q 014769 166 WEVDLDAVEALADKNT-AAMVII--NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLF-G 239 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~-~~v~i~--~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~ 239 (419)
.++|.+.+...+...+ ..+++. ..|||||+-.+.+.|++|.++.++.+.+-+.|.+|++|..+... ...+..+ .
T Consensus 181 ~gld~~g~ledl~~~p~gs~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~ 260 (427)
T KOG1411|consen 181 RGLDFKGMLEDLGEAPEGSIILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE 260 (427)
T ss_pred cccchHHHHHHHhcCCCCcEEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH
Confidence 6788887766665432 233444 44999999999999999999999999999999999998755321 1111122 2
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEE--EeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc--hHH---
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWL--VTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK--EDF--- 311 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~--- 311 (419)
...+++++.|++|.+|+.|-|+|.+ +|.+.+... .+...++.. +...++|+......+..+|.... .+|
T Consensus 261 ~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~---rV~SQlk~liRpmYSnPP~hGArIv~~Il~d~~l~~~W~~e 337 (427)
T KOG1411|consen 261 DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK---RVESQLKILIRPMYSNPPLHGARIVATILSDPDLKNQWLGE 337 (427)
T ss_pred cCCceEeehhhhhhcchhhhccceeEEEecCHHHHH---HHHHHHHHHhcccccCCCccchhhhhhccCChHHHHHHHHH
Confidence 2346899999999999999999996 444321111 122233333 24456777778888888887643 344
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCC
Q 014769 312 FCKLIDTLRESAEICYDGVKEI--PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN 388 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~ 388 (419)
+..+.+++...+..+.+.|+.. ++ +. ....+-|||.+..++ .+.++.|.+++.|+++...
T Consensus 338 vk~MadRi~~mR~~L~d~L~~~gs~~~W~-hI~~QIGMF~fTgl~----------peQv~~l~ke~~iYmT~dG------ 400 (427)
T KOG1411|consen 338 VKGMADRIISMRQQLFDALEKEGSPGNWS-HITKQIGMFCFTGLN----------PEQVDWLTKEYHIYLTKDG------ 400 (427)
T ss_pred HHHHHHhhhhhHHHHhHHhhcCCCCccHH-HHHHhhheeeecCCC----------HHHHHHHHhhheeeeccCc------
Confidence 4456788888999999998863 22 33 335677999987774 3456788899999986432
Q ss_pred eEEEEe-ecCHHHHHHHHHHHHHHH
Q 014769 389 WLRIAF-CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 389 ~~Ris~-~~~~~~l~~~l~~l~~~~ 412 (419)
|||+ +.+...+..+.+.|.++.
T Consensus 401 --RiS~aG~ss~nV~yLa~aih~vt 423 (427)
T KOG1411|consen 401 --RISMAGLSSSNVPYLADAIHAVT 423 (427)
T ss_pred --eEeeccccccCCcccchhhHhHh
Confidence 9999 567677777777776654
No 191
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.94 E-value=1.2e-23 Score=201.14 Aligned_cols=348 Identities=15% Similarity=0.134 Sum_probs=220.4
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|..... .-..+|.+.+++.++++..... ... -..+..+.+.+.+.+..+ .+.+++++++++
T Consensus 28 ~dg~~~lD~~~~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~--~~~-~~~~~~~~~~~~l~~~~~----~~~~~~~~SGs~ 99 (400)
T PTZ00125 28 VEGKKYYDFLSAYSAVN-QGHCHPKILAALINQAQKLTLT--SRA-FYNDVLGLAEKYITDLFG----YDKVLPMNSGAE 99 (400)
T ss_pred CCCCEEEEcccCHhhcc-CCcCCHHHHHHHHHHHHhcccc--ccc-ccCHHHHHHHHHHHhCCC----CCEEEEeCCcHH
Confidence 45888999988743321 1125789999999988653221 111 112333444444443222 368999999999
Q ss_pred HHHHHHHHhcC----------CCCeEEeeCCCCCCcHHHHhhcCCEEEEE----eccCCC--CcccChHHHHHhhc-CCc
Q 014769 119 AVEVILSVLAR----------PGANVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPER--NWEVDLDAVEALAD-KNT 181 (419)
Q Consensus 119 al~~~~~~l~~----------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~----~~~~~~--~~~~~~~~l~~~~~-~~~ 181 (419)
|++.+++.+.. .+++|++.+-+|++............... +..+.- -.-.|++.+++.+. +++
T Consensus 100 A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 179 (400)
T PTZ00125 100 AGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNNFGPFVPGFELVDYNDVEALEKLLQDPNV 179 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhccCCCCCCCceEeCCCCHHHHHHHhCCCCe
Confidence 99999997741 34789999999887644333222111110 000000 00137899999886 467
Q ss_pred cEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 182 AAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 182 ~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
++|++..++||||.+++ .+++++|.++|++||+++|+||+|.++.+.|..+. ....+....++ ++||.++.+++|
T Consensus 180 ~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~~-~~~~~~~pd~~---~~sK~l~~g~~~ 255 (400)
T PTZ00125 180 AAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLA-HDHEGVKPDIV---LLGKALSGGLYP 255 (400)
T ss_pred EEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhH-HHhcCCCCCEE---EEcccccCCCcC
Confidence 77777777999999885 66799999999999999999999987766554321 11112111223 478997654469
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----CCC
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----IPC 335 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~ 335 (419)
+||+++++ ++++.+.... ..+++.+++.+.++.++++....+.+ .++++++.+.+.+.|++ .+.
T Consensus 256 ig~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~ 324 (400)
T PTZ00125 256 ISAVLAND--------DVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPW 324 (400)
T ss_pred cEEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999976 5777765432 23456678888888777654322222 23344444555555544 222
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
+. ...+ .|.+.++.++... ..+..++..+|+ ++||.+.|+. .+++||++ ..+++++++++++|.++++
T Consensus 325 ~~-~~~~-~g~~~~v~~~~~~---~~~~~~~~~~l~-~~Gv~v~~~~----~~~lRi~~~~~~~~~~i~~~l~~l~~~l~ 394 (400)
T PTZ00125 325 VK-EIRG-KGLLNAIVFDHSD---GVNAWDLCLKLK-ENGLLAKPTH----DNIIRFAPPLVITKEQLDQALEIIKKVLK 394 (400)
T ss_pred eE-EEec-ccEEEEEEEccCc---chHHHHHHHHHH-HCCeEEeecC----CCEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 22 1133 5677777775310 113556777775 6799998863 57999997 4789999999999999999
Q ss_pred HHhccC
Q 014769 414 RHTKKH 419 (419)
Q Consensus 414 ~~~~~~ 419 (419)
++...|
T Consensus 395 ~~~~~~ 400 (400)
T PTZ00125 395 SFDSNK 400 (400)
T ss_pred HHhcCC
Confidence 876543
No 192
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.94 E-value=3.2e-24 Score=202.72 Aligned_cols=227 Identities=18% Similarity=0.175 Sum_probs=169.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g 152 (419)
+..|+.+ ...+|++.++++. + .++.+++++++.++..++.+++.+||+|+++...|.+ +...+...|
T Consensus 64 Y~r~~~p-~~~~le~~lA~l~------g--~~~al~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G 134 (403)
T PRK07810 64 YSRYGNP-TVSMFEERLRLIE------G--AEACFATASGMSAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWG 134 (403)
T ss_pred eeCCCCc-hHHHHHHHHHHHh------C--CCcEEEECChHHHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcC
Confidence 4566664 4789999999997 2 3588889999999999999999999999998866643 345567789
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++++++++|++.+|+||||.+.+ +++|.++|+++|+++|+|++|+...+..
T Consensus 135 ~~v~~vd~-------~d~~~l~~ai~~~tklV~~esp~Nptg~v~d---l~~I~~la~~~g~~vivD~a~a~~~~~~--- 201 (403)
T PRK07810 135 VETVFVDG-------EDLSQWEEALSVPTQAVFFETPSNPMQSLVD---IAAVSELAHAAGAKVVLDNVFATPLLQR--- 201 (403)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCCccccCC---
Confidence 99888763 3789999999888999999999999999998 9999999999999999999998644321
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
++ ..+. .+++.|++|.++..|.++ |+++++++ .+.+.++.. .......++..++.+...|+.
T Consensus 202 -~~-~~ga---Divv~S~tK~l~g~g~~~gG~v~~~~~-------~~~~~l~~~~~~~g~~~s~~~a~l~l~~L~t---- 265 (403)
T PRK07810 202 -GL-PLGA---DVVVYSGTKHIDGQGRVLGGAILGDRE-------YIDGPVQKLMRHTGPALSAFNAWVLLKGLET---- 265 (403)
T ss_pred -hh-hcCC---cEEEccCCceecCCcCceeEEEEeChH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhccCc----
Confidence 11 2222 388899999988888887 77776541 122334433 233345566666665555543
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
+..+.++..++...+.+.|+++|.+..+..|
T Consensus 266 -l~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP 296 (403)
T PRK07810 266 -LALRVRHSNASALRIAEFLEGHPAVRWVRYP 296 (403)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 6666777788888888899888776644433
No 193
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=5.8e-24 Score=200.32 Aligned_cols=314 Identities=15% Similarity=0.092 Sum_probs=211.2
Q ss_pred CChHHHHHHHHHHHhCCCCCCC------CC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh---
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCY------AT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL--- 127 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y------~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--- 127 (419)
+.++.+.+++.+.+.....+.. .. ..-+.++|+.+++++ +.++++|++|+|++++++.++..+
T Consensus 10 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~t~~~t~a~~~~l~~~~~~ 83 (364)
T PLN02651 10 PIDPRVLDAMLPFLIEHFGNPHSRTHLYGWESEDAVEKARAQVAALI------GADPKEIIFTSGATESNNLAIKGVMHF 83 (364)
T ss_pred CCCHHHHHHHHHHHHhCCCCCChhhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 5678899999887643211111 00 111446677777776 567789999999999988877654
Q ss_pred -cCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 128 -ARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 128 -~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
.++||+|++.+..|+.+... +...|.+++.++++ .++.+|++.++++++++++++++++++|+||.+.| ++
T Consensus 84 ~~~~g~~vl~~~~~h~s~~~~~~~~~~~g~~v~~v~~~--~~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~---l~ 158 (364)
T PLN02651 84 YKDKKKHVITTQTEHKCVLDSCRHLQQEGFEVTYLPVK--SDGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQP---VE 158 (364)
T ss_pred ccCCCCEEEEcccccHHHHHHHHHHHhcCCEEEEEccC--CCCcCCHHHHHHhcCCCcEEEEEECCCCCceeccc---HH
Confidence 46899999999888764332 34568888888874 34568999999999988999999999999999999 88
Q ss_pred HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283 (419)
Q Consensus 204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~ 283 (419)
+|.++|+++|+++++|.+++... .+..+..++. .+++.|.+|+++. ..+|+++++++....-.+.....-.
T Consensus 159 ~I~~~~~~~g~~~~vD~a~~~g~----~~~~~~~~~~---D~~~~s~hK~~gp--~G~g~l~v~~~~~~~l~p~~~g~~~ 229 (364)
T PLN02651 159 EIGELCREKKVLFHTDAAQAVGK----IPVDVDDLGV---DLMSISGHKIYGP--KGVGALYVRRRPRVRLEPLMSGGGQ 229 (364)
T ss_pred HHHHHHHHcCCEEEEEcchhhCC----cccCcccCCC---CEEEechhhhCCC--CceEEEEEcCCCCCCCCccccCCCc
Confidence 99999999999999999998632 2223334443 3788899996332 3489998876321110111100000
Q ss_pred hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCC--CC--ceEEEEeecCccccc
Q 014769 284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNK--PE--GSMVTMVKLNPWLLE 358 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~--p~--~g~~~~~~~~~~~~~ 358 (419)
......++++.....++.++++.... ..++..++.++..+++.+.|++ +++++++.+ +. ....+.+.++.
T Consensus 230 ~~~~~~GT~~~~~~~~l~~al~~~~~-~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~---- 304 (364)
T PLN02651 230 ERGRRSGTENTPLVVGLGAACELAMK-EMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAY---- 304 (364)
T ss_pred cCCccCCCccHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCC----
Confidence 00112456777777777777776433 3477778888999999999875 677774432 11 12244444542
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALK 402 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~ 402 (419)
.+..+++..| .+ |.+..|..+.. .+.+|+|++ ++++||+
T Consensus 305 --~~~~~~~~~L-~~--i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~~~~~t~~did 364 (364)
T PLN02651 305 --VEGESLLMGL-KE--VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGVGRFTTEEEVD 364 (364)
T ss_pred --CCHHHHHHHh-CC--EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEcCCCCCHHHcC
Confidence 2466777666 44 99988875422 268999995 5778764
No 194
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.94 E-value=1.1e-23 Score=197.99 Aligned_cols=222 Identities=18% Similarity=0.178 Sum_probs=166.9
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEE
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHF 158 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~ 158 (419)
.+...+|++.++++. + .+..++++++++|+..++.+++++||+|+++.+.|.+... .+...|.++..+
T Consensus 39 ~p~~~~le~~la~l~------g--~~~a~~~~sG~~Ai~~~l~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v 110 (369)
T cd00614 39 NPTVDALEKKLAALE------G--GEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVTFV 110 (369)
T ss_pred ChhHHHHHHHHHHHH------C--CCCEEEEcCHHHHHHHHHHHHcCCCCEEEECCCCcchHHHHHHHHHhhcCeEEEEe
Confidence 345789999999987 2 3567888888999999999999999999999999987543 344678877776
Q ss_pred eccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+.+ +++.+++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|++|+...+. .++ .+
T Consensus 111 ~~~-------d~~~l~~~i~~~~~~v~~e~~~np~g~~~d---l~~i~~la~~~g~~livD~t~~~~~~~----~~~-~~ 175 (369)
T cd00614 111 DPD-------DPEALEAAIKPETKLVYVESPTNPTLKVVD---IEAIAELAHEHGALLVVDNTFATPYLQ----RPL-EL 175 (369)
T ss_pred CCC-------CHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcchhcC----Chh-hh
Confidence 542 588899999888999999999999999998 889999999999999999999864431 111 22
Q ss_pred CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
+ ..+++.|++|.++.+| .+.|+++++++ ++++.++.... .....++...+++...++ .+..+.
T Consensus 176 g---~Divv~S~tK~l~g~~~~~gG~v~~~~~-------~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~-----tl~~r~ 240 (369)
T cd00614 176 G---ADIVVHSATKYIGGHSDVIAGVVVGSGE-------ALIQRLRFLRLALGTILSPFDAWLLLRGLK-----TLPLRM 240 (369)
T ss_pred C---CcEEEeccceeccCCCCceEEEEEeCcH-------HHHHHHHHHHHhhCCCCCHHHHHHHHcCCC-----CHHHHH
Confidence 2 3488999999987766 78999998642 46666665542 334455555555444443 245567
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 317 DTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
++..++...+.+.|+++|++..+..|
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p 266 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYP 266 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECC
Confidence 77888899999999988766544344
No 195
>PLN00144 acetylornithine transaminase
Probab=99.94 E-value=8.3e-24 Score=199.24 Aligned_cols=342 Identities=12% Similarity=0.066 Sum_probs=220.4
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|.-... .-.-+|.+.+++.+++..... +.. ....+....+++.+.+.. ..+.|++++++++
T Consensus 12 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~l~~~~----~~~~v~f~~sGse 83 (382)
T PLN00144 12 VEGKEYLDMAAGIAVNA-LGHGDPDWVKAVAEQAGTLAH--VSN-VYHTIPQVELAKRLVASS----FADRVFFCNSGTE 83 (382)
T ss_pred CCCCEEEECCcCHHhcc-CCCCCHHHHHHHHHHHHhcCC--ccc-cccCHHHHHHHHHHHhcC----CCCeEEEeCCcHH
Confidence 46899999988842211 123579999999999875322 111 122344556666664422 2468999999999
Q ss_pred HHHHHHHHhcC----C-----------CCeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCCc--ccChHHHHHhh
Q 014769 119 AVEVILSVLAR----P-----------GANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERNW--EVDLDAVEALA 177 (419)
Q Consensus 119 al~~~~~~l~~----~-----------gd~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~~--~~~~~~l~~~~ 177 (419)
|++.+++.... + ..+|+....+|++....+........ +.+..+.-.+ -.|++.+++.+
T Consensus 84 A~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~ 163 (382)
T PLN00144 84 ANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLI 163 (382)
T ss_pred HHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhc
Confidence 99999887532 0 24699999999987654443322110 0111110000 12688888887
Q ss_pred cCCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcC
Q 014769 178 DKNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRW 254 (419)
Q Consensus 178 ~~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~ 254 (419)
..+....+++.| +||.|.. .+.+++++|.++|++||+++|+||+|.++...+..+.. ...+.++ +.||||.+
T Consensus 164 ~~~~~aavi~eP~q~~gg~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD-----i~t~sK~l 238 (382)
T PLN00144 164 QKGKTAAVFVEPVQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD-----IMTLAKPL 238 (382)
T ss_pred CCCCeEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC-----EEEecccc
Confidence 654445555666 7885553 46677999999999999999999999998776653221 2333332 55889995
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHH-HHHHHHHHHhhc
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR-ESAEICYDGVKE 332 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~-~~~~~l~~~l~~ 332 (419)
.+|+|+||+++++ ++++.+... ...+++.+++.+.++.+.|+......+.++..++. ..++.+.+.+.+
T Consensus 239 -~~G~pig~v~~~~--------~~~~~~~~~~~~~T~~~~pl~~aaa~a~l~~i~~~~~~~~~~~~g~~l~~~l~~~~~~ 309 (382)
T PLN00144 239 -AGGLPIGAVLVTE--------KVASAINPGDHGSTFAGGPLVCNAALAVLDKISKPGFLASVAKKGEYLRELLRRKLGG 309 (382)
T ss_pred -cCCcceEEEEEcH--------HHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHhh
Confidence 6899999999975 566666533 23456788888888886665432222222222222 223344444555
Q ss_pred CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHH
Q 014769 333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKA 410 (419)
Q Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~ 410 (419)
.|.+..+ ...|+++|+.+.. ....+...+ .++||.+.|+.. .+.+|++++ .+++++++++++|.+
T Consensus 310 ~~~~~~v--rg~G~~~~l~l~~-------~~~~~~~~~-~~~Gv~i~~~~~---~~~lrl~p~~~~~~~~i~~~~~~l~~ 376 (382)
T PLN00144 310 NPHVKEV--RGVGLLVGIQLDV-------PAGPLVDAC-RDSGLLVLTAGK---GDVVRLVPPLVISEAELEQAVEILAD 376 (382)
T ss_pred CCCceee--ecCceEEEEEecC-------ccHHHHHHH-HHCCeEEeecCC---CCEEEEeCCCccCHHHHHHHHHHHHH
Confidence 5443212 2479999999842 245666665 668999988732 489999994 589999999999999
Q ss_pred HHHHH
Q 014769 411 FCQRH 415 (419)
Q Consensus 411 ~~~~~ 415 (419)
++.++
T Consensus 377 ~l~~~ 381 (382)
T PLN00144 377 CLPAL 381 (382)
T ss_pred HHHhc
Confidence 98764
No 196
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.94 E-value=1.2e-23 Score=199.08 Aligned_cols=221 Identities=19% Similarity=0.200 Sum_probs=160.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g 152 (419)
+..|+. +...+|++.++++. +. +..++++++++++..++.+++++||+|+++.|.|.... ..+...|
T Consensus 59 y~r~~~-p~~~~le~~lA~l~------g~--~~~i~~~sG~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G 129 (403)
T PRK07503 59 YSRISN-PTLALLEQRMASLE------GG--EAAVALASGMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFG 129 (403)
T ss_pred eeCCCC-chHHHHHHHHHHHh------CC--CcEEEEcCHHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCC
Confidence 344554 35789999999987 32 34577778889999999999999999999999986532 3345678
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 130 ~~v~~vd~-------~d~~~l~~~i~~~tklV~le~p~NPtG~~~d---i~~I~~la~~~gi~lIvD~a~a~~~~~---- 195 (403)
T PRK07503 130 VTVRHVDL-------TDPAALKAAISDKTRMVYFETPANPNMRLVD---IAAVAEIAHGAGAKVVVDNTYCTPYLQ---- 195 (403)
T ss_pred EEEEEeCC-------CCHHHHHHhcCccCcEEEEeCCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----
Confidence 88887764 2688999999888999999999999999998 889999999999999999999864321
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--hc-cccCCchHHHHHHHHHHcccc
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--LS-IYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~~~~~~~a~~~~l~~~~ 308 (419)
.++ .++. .+++.|+||.++.+| .+.|+++.+. ++.++++.. .. .....++..++.+...|
T Consensus 196 ~~l-~~g~---Di~v~S~tK~l~g~gd~~gG~v~~~~--------~l~~~l~~~~~~~~~g~~~s~~~a~l~l~~L---- 259 (403)
T PRK07503 196 RPL-ELGA---DLVVHSATKYLGGHGDITAGLVVGGK--------ALADRIRLEGLKDMTGAVMSPFDAFLLMRGL---- 259 (403)
T ss_pred Cch-hhCC---CEEEccccccccCCCceeEEEEEcCH--------HHHHHHHhhhHHhCcCCCCCHHHHHHHHcCc----
Confidence 122 2222 388999999988766 7788887543 566766633 22 23344555444433333
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
+.+..+.++..++...+.+.|+++|.+.
T Consensus 260 -~tl~~r~~~~~~na~~~a~~L~~~p~v~ 287 (403)
T PRK07503 260 -KTLALRMDRHCASAQAVAEWLARHPAVE 287 (403)
T ss_pred -chHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 3355555566677888888888776554
No 197
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.94 E-value=8.5e-24 Score=199.18 Aligned_cols=223 Identities=21% Similarity=0.282 Sum_probs=164.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g 152 (419)
+.+|+.+ -..++++.++++. + .+.+++++|+++++..++.+++++||+|+++.+.|.+. ...+...|
T Consensus 48 y~r~~~p-~~~~le~~la~l~------g--~~~~~~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g 118 (380)
T TIGR01325 48 YSRYANP-TVAAFEERIAALE------G--AERAVATATGMSAIQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFG 118 (380)
T ss_pred eecCCCc-hHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhC
Confidence 3456553 4689999999987 2 25788899999999999999999999999999988653 33566778
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
.++..++.+ |++.+++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|....+..
T Consensus 119 ~~v~~v~~~-------d~~~l~~~i~~~tklV~le~p~np~g~~~d---l~~I~~la~~~gi~livD~a~~~~~~~~--- 185 (380)
T TIGR01325 119 IEVSFVDPT-------DLNAWEAAVKPNTKLVFVETPSNPLGELVD---IAALAELAHAIGALLVVDNVFATPVLQQ--- 185 (380)
T ss_pred CEEEEECCC-------CHHHHHHhcCCCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccCC---
Confidence 888877642 688898888888999999999999999998 8999999999999999999998643221
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
++ .++. .+++.|++|.++.+|.++ |++++++ ++++.++.... .....++....+ ++.. .+
T Consensus 186 -pl-~~g~---Divv~S~sK~l~g~g~~~gG~vv~~~--------~~~~~l~~~~~~~g~~~~p~~a~~---~l~~--l~ 247 (380)
T TIGR01325 186 -PL-KLGA---DVVVYSATKHIDGQGRVMGGVIAGSE--------ELMAEVAVYLRHTGPAMSPFNAWV---LLKG--LE 247 (380)
T ss_pred -ch-hhCC---CEEEeeccceecCCCCeEEEEEEeCH--------HHHHHHHHHHHhhCCCCCHHHHHH---HHhc--cC
Confidence 12 2222 388889999988888886 6666543 46666665432 222333333322 3332 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCP 339 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 339 (419)
.+..+.++..+++..+.+.|+++|++..|
T Consensus 248 tl~~r~~~~~~~a~~la~~L~~~p~v~~V 276 (380)
T TIGR01325 248 TLSLRMQKQFDSALAIAEWLQAQPQVQAV 276 (380)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCCCccEE
Confidence 45566777888888899999888765533
No 198
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.94 E-value=1e-23 Score=198.92 Aligned_cols=226 Identities=16% Similarity=0.163 Sum_probs=162.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g 152 (419)
+.+|+.+ ...+|++.+|++. + .+..++++++++++..++.+++.+||.|+++.|.|... ...+...|
T Consensus 53 y~r~~~p-~~~~le~~lA~l~------g--~~~av~~~sG~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G 123 (391)
T TIGR01328 53 YSRLGNP-TVSNLEGRIAFLE------G--TEAAVATSSGMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFG 123 (391)
T ss_pred eeCCCCc-hHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCC
Confidence 4455554 4678999999998 2 24578888889999999999999999999999988643 33445578
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+.+..++++ |++.+++++++++++|++++|+||+|.+.+ +++|.++|+++|+++|+|++|......
T Consensus 124 ~~~~~vd~~-------d~e~l~~~i~~~tklV~le~p~Np~G~v~d---l~~I~~la~~~gi~livD~a~a~~~~~---- 189 (391)
T TIGR01328 124 IQVDFINMA-------IPEEVKAHIKDNTKIVYFETPANPTMKLID---MERVCRDAHSQGVKVIVDNTFATPMLT---- 189 (391)
T ss_pred eEEEEECCC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCchhccC----
Confidence 888777642 688999999888999999999999999998 888999999999999999999864321
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhh--cc-ccCCchHHHHHHHHHHcccc
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCL--SI-YSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~--~~-~~~~~~~~~~a~~~~l~~~~ 308 (419)
.++ ..+. .+++.|+||.++.+|.++ |++++++ ++++.++... .. ....++...+.+...|+
T Consensus 190 ~~~-~~g~---Divv~S~sK~lgg~g~~~gG~v~~~~--------~li~~l~~~~~~~~~g~~l~~~~a~l~l~~L~--- 254 (391)
T TIGR01328 190 NPV-ALGV---DVVVHSATKYIGGHGDVVAGLICGKA--------ELLQQIRMVGIKDMTGSVISPFDAWLILRGLK--- 254 (391)
T ss_pred Cch-hcCC---CEEEccccccccCCCCceEEEEEcCH--------HHHHHHHHHHHHhCCCCCCCcHHHHHHHhCcC---
Confidence 112 1222 288899999999888775 6665533 5666666432 11 22334443333333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
.+..+.++.+++...+.+.|+++|++..+..|
T Consensus 255 --tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp 286 (391)
T TIGR01328 255 --TLNIRMKRHSENAMKVAEYLKSHPAVEKVYYP 286 (391)
T ss_pred --cHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 24555677788888888988887765534333
No 199
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=1.1e-24 Score=204.59 Aligned_cols=316 Identities=14% Similarity=0.113 Sum_probs=212.0
Q ss_pred CChHHHHHHHHHHHhCCC--CCCCCCC------CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-
Q 014769 59 RTAVEAEDAIVDAVRSGK--FNCYATN------SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR- 129 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~--~~~Y~~~------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~- 129 (419)
++++.+++++.+.+.... ...+... .-+.++|+.+++++ +.++++|++|+|++++++.++.++..
T Consensus 9 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~------g~~~~~v~~~~g~t~a~~~~l~~l~~~ 82 (353)
T TIGR03235 9 PIDPAVAEAMLPWLLEEFGNPSSRTHEFGHNAKKAVERARKQVAEAL------GADTEEVIFTSGATESNNLAILGLARA 82 (353)
T ss_pred CCCHHHHHHHHHHHHhcCCCCCchhhHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCCHHHHHHHHHHHHHHh
Confidence 577889999988774321 1111111 11357788888887 56788999999999999999988753
Q ss_pred ---CC-CeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769 130 ---PG-ANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 130 ---~g-d~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 202 (419)
+| +.|++....|+.+. ..++..|.+++.++.+. ++.+|++.+++.++++++++++++|+||||.++| +
T Consensus 83 ~~~~g~~~vi~~~~~~~s~~~~~~~~~~~G~~v~~v~~~~--~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~---~ 157 (353)
T TIGR03235 83 GEQKGKKHIITSAIEHPAVLEPIRALERNGFTVTYLPVDE--SGRIDVDELADAIRPDTLLVSIMHVNNETGSIQP---I 157 (353)
T ss_pred cccCCCCeeeEcccccHHHHHHHHHHHhcCCEEEEEccCC--CCcCCHHHHHHhCCCCCEEEEEEcccCCceeccC---H
Confidence 55 77888877776543 33455688998888753 4568999999999888899999999999999999 8
Q ss_pred HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc--hhhHHH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ--KSGIID 280 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~--~~~~~~ 280 (419)
++|.++|+++|+++++|++++... ....+...+ ..+++.|.+|.++.+| +|++++++...... .+....
T Consensus 158 ~~I~~l~~~~~~~~ivD~a~~~g~----~~~~~~~~~---~D~~~~s~~K~~gp~g--~g~l~~~~~~~~~~~~~~~~~~ 228 (353)
T TIGR03235 158 REIAEVLEAHEAFFHVDAAQVVGK----ITVDLSADR---IDLISCSGHKIYGPKG--IGALVIRKRGKPKAPLKPIMFG 228 (353)
T ss_pred HHHHHHHHHcCCEEEEEchhhcCC----ccccccccC---CCEEEeehhhcCCCCc--eEEEEEccCcccccccCceeeC
Confidence 999999999999999999988632 222222222 2377778999865555 89998876311000 000000
Q ss_pred HHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce--EEEEeecCccccc
Q 014769 281 SIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS--MVTMVKLNPWLLE 358 (419)
Q Consensus 281 ~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g--~~~~~~~~~~~~~ 358 (419)
.-.......++++.....++.++++.. ....++..++++++.+.+++.|++ +|++.+..+... ..+.+.++.
T Consensus 229 ~~~~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~---- 302 (353)
T TIGR03235 229 GGQERGLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDG---- 302 (353)
T ss_pred CCCcCccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCC----
Confidence 000000113455666666676676653 245677888999999999999988 477744233221 123333332
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCCC----CeEEEEeecCHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGLK----NWLRIAFCAEPSALKDG 404 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~~----~~~Ris~~~~~~~l~~~ 404 (419)
.+..++...| ++ +|.+.+|..|... .++|.+++.+++++..+
T Consensus 303 --~~~~~v~~~L-~~-~i~v~~g~~~~~~~~~~~~~l~~~g~~~~~~~~~ 348 (353)
T TIGR03235 303 --VNSEALIVNL-RA-DAAVSTGSACSSSKYEPSHVLQAMGLDTDRARGA 348 (353)
T ss_pred --cCHHHHHHHH-hC-CeEEEchhhcCCCCCCCCHHHHHcCCCHHHhCcc
Confidence 2455665555 65 8999999988653 36888888777665544
No 200
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.93 E-value=6.4e-23 Score=198.53 Aligned_cols=340 Identities=13% Similarity=0.069 Sum_probs=226.5
Q ss_pred ccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC---CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769 47 LGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY---ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI 123 (419)
Q Consensus 47 l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y---~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~ 123 (419)
.+.|.+ .+..+|.+.+++.+.......+.| ...+|..+++..+.+++.+.+|.+ ...+..++|+++.+..+
T Consensus 73 ~g~G~~----~~~~~p~i~~~~~~~~~~~~~tpYq~e~~sqG~lel~~~~~~~la~l~G~~--~~~l~~~~GA~a~~~~l 146 (481)
T PRK04366 73 YPLGSC----TMKYNPKINEKVARLPGFAELHPLQPEETVQGALELMYELQEWLKEITGMD--AVTLQPAAGAHGELTGL 146 (481)
T ss_pred ecCccc----CCCCCHHHHHHHHhCcchhcCCCCCChhhhhHHHHHHHHHHHHHHHHhCCC--ceEEEeCcHHHHHHHHH
Confidence 455553 355678888887765222345577 356789999999999999888753 34455556666555533
Q ss_pred --HH-HhcCCCC----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccC
Q 014769 124 --LS-VLARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNV 196 (419)
Q Consensus 124 --~~-~l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~ 196 (419)
++ .+.++|| +|+++.|+|+.+...+...|++++.++++ .++.+|++.|++++++++++|++++|+ |||..
T Consensus 147 ~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~~~~~~G~~vv~v~~~--~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~ 223 (481)
T PRK04366 147 LMIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSN--EDGLVDLEALKAAVGEDTAALMLTNPN-TLGLF 223 (481)
T ss_pred HHHHHHhhccCcCCCCEEEEcCCccHhHHHHHHHcCCEEEEeecC--CCCCcCHHHHHhhcccCCeEEEEeCCC-Ccccc
Confidence 22 3456666 99999999999999999999999999874 346799999999998889999999988 99965
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCCCc
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPNGI 272 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~ 272 (419)
.+++++|+++|+++|+++++|.++.....+ . .+...++.+ +++++.+|+++.| |..+|++++++.
T Consensus 224 --~~dl~eI~~~a~~~gal~iVD~a~~~~~~g-~--~~~~~~GaD---~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~--- 292 (481)
T PRK04366 224 --ERNILEIAEIVHEAGGLLYYDGANLNAILG-K--ARPGDMGFD---VVHLNLHKTFSTPHGGGGPGSGPVGVKEE--- 292 (481)
T ss_pred --chHHHHHHHHHHHcCCEEEEEecChhhhcc-c--CCccccCCC---EEEEechhhcCCCCCCCCCCeeeeeehhh---
Confidence 346999999999999999999998642221 1 122333433 8888999997754 466889888652
Q ss_pred cchhhHHHHHHhh--------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 273 FQKSGIIDSIKDC--------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 273 ~~~~~~~~~l~~~--------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
+.+.+... +...++.+.....++..++.....+.+++..++...+.+++.+.|.+
T Consensus 293 -----~~~~lp~~~v~~~g~~~~l~~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~ 367 (481)
T PRK04366 293 -----LAPFLPVPVVEKDGDRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKD 367 (481)
T ss_pred -----hHhhCCCCeeeccCCceeecccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHh
Confidence 22222100 00111223344445555555544677888888888889999999987
Q ss_pred CCCCCCCCCCCce-EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEee--cCHHHHHHHHHHH
Q 014769 333 IPCISCPNKPEGS-MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFC--AEPSALKDGLGRM 408 (419)
Q Consensus 333 ~~~~~~~~~p~~g-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~--~~~~~l~~~l~~l 408 (419)
+..+. . +... .-+.+.++.....+ .+..++.++| .++||.+....... ..+.+|++++ .++++|+.+++.|
T Consensus 368 ~~~~~-~--~~~~~~~~~~~~~~~~~~g-~~~~~v~~~L-~~~Gi~~~~~~~p~~~~~~l~is~~e~~t~edid~l~~~l 442 (481)
T PRK04366 368 IYDLP-Y--DRPCMHEFVLSGKKLKETG-VRTLDIAKRL-LDYGFHPPTIYFPLIVPEALMIEPTETESKETLDAFIAAM 442 (481)
T ss_pred hCccc-C--CCCeeEEEEEECccccccC-CCHHHHHHHH-HHCCccCCccccccccCCeEEEcccCCCCHHHHHHHHHHH
Confidence 62332 1 2111 11223322111111 1466777777 56799864222212 2578999994 6899999999999
Q ss_pred HHHHHHHh
Q 014769 409 KAFCQRHT 416 (419)
Q Consensus 409 ~~~~~~~~ 416 (419)
+++.++..
T Consensus 443 ~~i~~~~~ 450 (481)
T PRK04366 443 KQIAEEAK 450 (481)
T ss_pred HHHHHHHH
Confidence 99987654
No 201
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.1e-23 Score=196.70 Aligned_cols=221 Identities=21% Similarity=0.179 Sum_probs=158.2
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~ 159 (419)
....+|+++++++.. . +..++++++++|+..++.+++++||+|+++.|+|.+....+ ...|+++..++
T Consensus 61 p~~~~Le~~lA~~~g------~--~~~i~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d 132 (388)
T PRK07811 61 PTRTALEEQLAALEG------G--AYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVD 132 (388)
T ss_pred ccHHHHHHHHHHHhC------C--CceEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeC
Confidence 568899999999983 2 23355566789999999999999999999999998543332 23466666654
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .++. .+
T Consensus 133 ~-------~d~e~l~~~i~~~tklV~ie~p~NPtg~~~d---l~~I~~la~~~gi~lIvD~a~a~~~~~----~p~~-~g 197 (388)
T PRK07811 133 L-------SDLDAVRAAITPRTKLIWVETPTNPLLSITD---IAALAELAHDAGAKVVVDNTFASPYLQ----QPLA-LG 197 (388)
T ss_pred C-------CCHHHHHHhcCcCCeEEEEECCCCCcceecC---HHHHHHHHHHcCCEEEEECCCCccccC----Cchh-hC
Confidence 3 4789999999888999999999999999877 899999999999999999999864321 1221 22
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
. .+++.|++|.++.+| .+.||++++++ ++.+.++..... ....++...+.+...|+ .+..+.+
T Consensus 198 a---Divv~S~sK~l~g~~~~~gG~vv~~~~-------~l~~~~~~~~~~~g~~~s~~~a~l~~~~L~-----tl~~R~~ 262 (388)
T PRK07811 198 A---DVVVHSTTKYIGGHSDVVGGALVTNDE-------ELDEAFAFLQNGAGAVPGPFDAYLTLRGLK-----TLAVRMD 262 (388)
T ss_pred C---cEEEecCceeecCCCCcEEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccC-----cHHHHHH
Confidence 2 388999999987755 57899987652 455555544432 22333333333333333 2556666
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
+..++...+.+.|+++|++..+..|
T Consensus 263 ~~~~na~~la~~L~~~p~v~~V~yP 287 (388)
T PRK07811 263 RHSENAEAVAEFLAGHPEVSTVLYP 287 (388)
T ss_pred HHHHHHHHHHHHHHhCCCeeEEECC
Confidence 7778888899999887765433333
No 202
>PRK07505 hypothetical protein; Provisional
Probab=99.93 E-value=3.6e-23 Score=197.37 Aligned_cols=333 Identities=16% Similarity=0.156 Sum_probs=204.9
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCC-----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYAT-----NSGIPPARRAIADYLSRDLPYKLSADDVYV 112 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~-----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (419)
.+|..++||+..++ ..+..+|++.+++.+++.... ...+.. .....++++.+++++ +. +.++
T Consensus 43 ~~g~~~ld~~s~~~---lgl~~~p~v~~A~~~~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~------~~---~~~~ 110 (402)
T PRK07505 43 ADGHTFVNFVSCSY---LGLDTHPAIIEGAVDALKRTGSLHLSSSRTRVRSQILKDLEEALSELF------GA---SVLT 110 (402)
T ss_pred cCCceEEEeecCCc---cCCCCCHHHHHHHHHHHHHhCCCCCCccchhhhhHHHHHHHHHHHHHh------CC---CEEE
Confidence 35888999977542 223568999999999986421 111111 122345666666655 22 4555
Q ss_pred cccHHHHHHHHHHHhc----CCC-CeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 113 TLGCKQAVEVILSVLA----RPG-ANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 113 t~g~~~al~~~~~~l~----~~g-d~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+++++++...++..+. .+| ..|++.+..|++.. ......+.+++.++. .|++.++++++++++++
T Consensus 111 ~~sG~~a~~~ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~~~~~v~~~~~-------~d~~~l~~~~~~~~~~~ 183 (402)
T PRK07505 111 FTSCSAAHLGILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICADETEVETIDH-------NDLDALEDICKTNKTVA 183 (402)
T ss_pred ECChHHHHHHHHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhhcCCeEEEeCC-------CCHHHHHHHHhcCCCEE
Confidence 5566678777775543 223 23666665655421 111223445555543 37889998887778899
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC-CCccccC--CCCcEEEEecCCCcCCCCCcee
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFG--SIVPVITLGSISKRWLVPGWRF 261 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~ 261 (419)
++++|+||||.+.+ +++|.++|+++++++|+||+|+...++.... .....++ ..+++++++|+||.++++|
T Consensus 184 vl~~p~~~~G~~~~---~~~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~G--- 257 (402)
T PRK07505 184 YVADGVYSMGGIAP---VKELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGASG--- 257 (402)
T ss_pred EEEecccccCCcCC---HHHHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhccC---
Confidence 99999999999999 7888999999999999999996544432211 1111222 2346899999999988776
Q ss_pred EEEEeeCCCCccchhhHHHHHHhhhc-c--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014769 262 GWLVTNDPNGIFQKSGIIDSIKDCLS-I--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC 338 (419)
Q Consensus 262 G~~~~~~~~~~~~~~~~~~~l~~~~~-~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 338 (419)
||+++.++ ++++.++.... . +.++++++..++.+.++....+++.+..++++++.+.+...+...
T Consensus 258 g~~~~~~~-------~~~~~~~~~~~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~----- 325 (402)
T PRK07505 258 GVIMLGDA-------EQIELILRYAGPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE----- 325 (402)
T ss_pred eEEEeCCH-------HHHHHHHHhCCCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----
Confidence 88765432 56777765432 1 223455666666666653223444455555555555443322111
Q ss_pred CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769 339 PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 339 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~ 413 (419)
. ...+.++.++.++.. .+..++...|+ ++||.+.++..+.. .+++|+++. .++++++++++.|++++.
T Consensus 326 ~-~g~~~~i~~~~~~~~-----~~~~~~~~~l~-~~Gi~v~~~~~p~~~~~~~~lRi~~~~~~t~eei~~~~~~l~~~l~ 398 (402)
T PRK07505 326 Q-SGSFLPIRLIYIGDE-----DTAIKAAKQLL-DRGFYTSPVFFPVVAKGRAGLRIMFRASHTNDEIKRLCSLLKEILD 398 (402)
T ss_pred C-CCCCCCEEEEEeCCH-----HHHHHHHHHHH-HCCCeEeeecCCCCCCCCceEEEecCccCCHHHHHHHHHHHHHHHH
Confidence 1 111122223333210 12456777774 67999998754433 268999996 689999999999999886
Q ss_pred HH
Q 014769 414 RH 415 (419)
Q Consensus 414 ~~ 415 (419)
+-
T Consensus 399 ~~ 400 (402)
T PRK07505 399 EG 400 (402)
T ss_pred hh
Confidence 53
No 203
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.93 E-value=1.7e-23 Score=195.98 Aligned_cols=282 Identities=16% Similarity=0.200 Sum_probs=188.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g 152 (419)
+.+|++ ....+|+++++++. .++.++++++++++..++.+++++||+|++++|+|+.+...+ ...|
T Consensus 45 y~ry~~-p~~~~Le~~lA~l~---------~~~~v~~~sG~~Ai~~~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G 114 (366)
T PRK07582 45 YGRASN-PTWRALEAALGELE---------GAEALVFPSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLG 114 (366)
T ss_pred eECCCC-ccHHHHHHHHHHHc---------CCCEEEECCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCe
Confidence 445665 57899999999986 235666667778999999999999999999999998876543 4468
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
++++.++.... .+ .+.+++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.... +.
T Consensus 115 ~~v~~v~~~~~------~~----~~~~~t~lV~le~p~NPtg~v~d---i~~I~~~a~~~g~~lvVD~t~~~~~--~~-- 177 (366)
T PRK07582 115 VTVREAPTAGM------AE----AALAGADLVLAETPSNPGLDVCD---LAALAAAAHAAGALLVVDNTTATPL--GQ-- 177 (366)
T ss_pred EEEEEECCCCh------HH----HhccCceEEEEECCCCCCCCccC---HHHHHHHHHHcCCEEEEECCCCCcc--cc--
Confidence 88888775321 11 22347889999999999998887 9999999999999999999996421 11
Q ss_pred CCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++ .++.+ ++++|+||.++. +|+++||++++++ ++++.++..... ...+++...+.+...++.
T Consensus 178 ~p~-~~g~D---ivv~S~sK~l~G~~g~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~a~l~~r~l~t---- 242 (366)
T PRK07582 178 RPL-ELGAD---LVVASDTKALTGHSDLLLGYVAGRDP-------ELMAAVERWRLLAGAIPGPFEAWLAHRSLGT---- 242 (366)
T ss_pred Cch-hcCCc---EEEecccccccCCCCeeEEEEEcCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHhcccc----
Confidence 122 22322 788999998754 5799999997542 466767665433 334555555555444443
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC------C-----------CceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNK------P-----------EGSMVTMVKLNPWLLEDINDDIEFALKLAKE 373 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~------p-----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 373 (419)
+..+.++..++...+.+.|+++|.+..+.. | .+| .+.+.++ +..+ +.+++..
T Consensus 243 -l~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg-~~s~~~~--------~~~~-~~~~~~~ 311 (366)
T PRK07582 243 -LGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGG-LVSFELA--------DAAA-AERFVAA 311 (366)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcc-eEEEEeC--------CHHH-HHHHHHh
Confidence 455556777888889999988776553332 2 234 4445564 2222 3444455
Q ss_pred cCeEeecCCCCCC----------------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 374 ESVIVTPGIYVGL----------------KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 374 ~gv~v~~g~~~~~----------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
.++.. .+..+|. ++.||+|++.. +.+++++.|++++.+
T Consensus 312 l~~~~-~~~s~G~~~sl~~~~~~~~~~~~~~liR~svGlE--~~~dli~dl~~al~~ 365 (366)
T PRK07582 312 SRLVV-AATSFGGVHTSADRRARWGDAVPEGFVRLSCGIE--DTDDLVADLERALDA 365 (366)
T ss_pred CCcce-ecccCCCccchhhhHHHcCCCCCCCeEEEEeccC--CHHHHHHHHHHHHhh
Confidence 56543 2222221 35799999863 345556666666543
No 204
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.93 E-value=1e-23 Score=179.78 Aligned_cols=377 Identities=16% Similarity=0.144 Sum_probs=263.9
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCCh-HHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTA-VEAEDAIVDAVRSG-KFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~-~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia 94 (419)
...+++..+..+.++.. +...+..+||++|.-..+.+.|+. |.++++-.+...+. ..+.|.|..|.+.++++.+
T Consensus 9 I~~a~p~~vf~~~~~y~----~d~~p~KvnL~igAYRtd~g~PWvLPvVk~~e~~i~~d~s~NHEYLpi~Gl~~F~~~A~ 84 (410)
T KOG1412|consen 9 IPVAPPIEVFKLNASYG----EDLDPVKVNLGIGAYRTDDGKPWVLPVVKKAEKKIANDQSLNHEYLPILGLPTFTKAAT 84 (410)
T ss_pred CccCChHHHHhhHHHhc----ccCCcceeecccceEEcCCCCeeEehhhhhhhhhccCchhccchhccccCchhhhhhhH
Confidence 34556666666655433 345788899999944333334433 44433332222222 2358999999999999999
Q ss_pred HHHHhhCCCCCCCCcE--EEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC-EEEEEeccCCCCcccC
Q 014769 95 DYLSRDLPYKLSADDV--YVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV-EVRHFDLLPERNWEVD 169 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~ 169 (419)
+.+.......+..+++ +-+-|+|.|+.+....+.. ...+|.+.+|+|..+..+++..|+ .+..++.-..++-.+|
T Consensus 85 el~lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~~if~~aGf~tv~~Y~yWd~~~k~~d 164 (410)
T KOG1412|consen 85 ELLLGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHHAIFEKAGFTTVATYPYWDAENKCVD 164 (410)
T ss_pred HHhcCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHHHHHHHcCCceeeeeeeecCCCceec
Confidence 9986544445566665 5678889999998887743 457799999999999999999994 4566666555566789
Q ss_pred hHHHHHhhcCCc--cEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC--CCcccc-CCCCc
Q 014769 170 LDAVEALADKNT--AAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY--TPMGLF-GSIVP 243 (419)
Q Consensus 170 ~~~l~~~~~~~~--~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~-~~~~~ 243 (419)
++.+...+...+ ..+++..+ +||||.-.+.++|.+|+++.++.+.+.+.|-+|++|..++... ..+.-+ .....
T Consensus 165 ~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e 244 (410)
T KOG1412|consen 165 LEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE 244 (410)
T ss_pred HHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe
Confidence 999888876543 23334433 9999999999999999999999999999999999987654321 111111 12235
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc--hHH---HHHHHH
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK--EDF---FCKLID 317 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~--~~~---~~~~~~ 317 (419)
++++.||+|.+|+.+-|+|-+.+--..... .+.+...+... +...+.|+......+.++|.... ++| ++.+..
T Consensus 245 ~fv~QSFaKNfGlYneRvGnltvv~~n~a~-i~~v~SQl~lviR~~~SNPPAyGArIV~kvL~tP~lre~W~~sik~Mss 323 (410)
T KOG1412|consen 245 LFVCQSFAKNFGLYNERVGNLTVVVNNPAV-IAGVKSQLTLVIRSNWSNPPAYGARIVHKVLSTPELREQWIQSIKTMSS 323 (410)
T ss_pred EEEEhhhhhhcccccccccceEEEecChhH-HHHHHHHHHHHHhhccCCCcchhhHHHHHHhcCHHHHHHHHHHHHHHHH
Confidence 799999999999999999986542211100 01233333333 23456777778888999998743 233 455667
Q ss_pred HHHHHHHHHHHHhhcC--CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-
Q 014769 318 TLRESAEICYDGVKEI--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF- 394 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~--~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~- 394 (419)
|+++.|..|++.|..+ ||-.-....+.|||.+..+. . ..++.|.+++.|++.+.. ||++
T Consensus 324 RI~~MR~aLrd~L~aL~TPGtWDHI~~QiGMFSyTGLt---------p-~qV~~li~~h~vyLl~~G--------RInis 385 (410)
T KOG1412|consen 324 RIKKMRTALRDHLVALKTPGTWDHITQQIGMFSYTGLT---------P-AQVDHLIENHKVYLLSDG--------RINIS 385 (410)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHhhccceeecCCC---------H-HHHHHHHHhceEEEecCC--------cEeee
Confidence 8888888888888775 55332446788999987664 2 345788899999988755 9999
Q ss_pred ecCHHHHHHHHHHHHHHHHHHh
Q 014769 395 CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.+...++...+.|.+..+.+.
T Consensus 386 GLN~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 386 GLNMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred ccccccHHHHHHHHHHHHHhhc
Confidence 6788899999999998887654
No 205
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.93 E-value=4.6e-23 Score=195.78 Aligned_cols=344 Identities=16% Similarity=0.130 Sum_probs=217.3
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
..+|+.++||..|.....-.. .+|.+.+++.++++.... ..|.. .-..+|.+.++++. ..+.++++++
T Consensus 31 d~dG~~ylD~~~g~~~~~lGh-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~la~~L~~~~--------~~~~~~f~~S 100 (397)
T TIGR03246 31 DQQGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGNGYTN-EPVLRLAKKLVDAT--------FADKVFFCNS 100 (397)
T ss_pred eCCCCEEEECCcCHhhccCCC-CCHHHHHHHHHHHHhcccccCccCC-HHHHHHHHHHHhhC--------CCCEEEEeCC
Confidence 346889999988743222222 589999999999875321 11221 11234444444432 2369999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CCEEEE---EeccCCC--CcccChHHHHHhhcCCc
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QVEVRH---FDLLPER--NWEVDLDAVEALADKNT 181 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~~~~~---~~~~~~~--~~~~~~~~l~~~~~~~~ 181 (419)
+++|++.+++.... +| +.|+..+-+|++........ +..... -+..+.- -.-.|++.+++.+.+++
T Consensus 101 GseA~e~Alk~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 180 (397)
T TIGR03246 101 GAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKT 180 (397)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCe
Confidence 99999999998631 23 67888888888764333222 211000 0000000 00127889998887666
Q ss_pred cEEEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 182 AAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 182 ~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
.+|++..++++.|.. .+.+++++|.++|++||+++|+||+|.++...|..+ ....++.... + -++||.++ .|++
T Consensus 181 aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~-a~~~~gv~pD-i--~t~~K~lg-gG~p 255 (397)
T TIGR03246 181 CAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPD-I--LTSAKALG-GGFP 255 (397)
T ss_pred EEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccch-hhhhcCCCCC-E--EEeehhhh-CCcc
Confidence 666655445566654 489999999999999999999999998876655432 2222222222 2 27899975 7999
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-CCCC
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-CISC 338 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~ 338 (419)
+|++++++ ++++.+.... ..+++.+++.+.++.+.|+... -++..++++++.+++.+.|+++. ...+
T Consensus 256 igav~~~~--------~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~---~~~l~~~~~~~~~~l~~~L~~l~~~~~~ 324 (397)
T TIGR03246 256 IGAMLTTT--------EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVN---TPELLAGVKQRHDLFVDGLEKINARYNV 324 (397)
T ss_pred eeEEEEcH--------HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHh---hccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 99999975 5777775432 2345678888888878776522 23456777778888888777641 1111
Q ss_pred CC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 339 PN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 339 ~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+. ....|.++.+.+.... ......++..+ .++||.+.+.. .+++|+++ ..++++|++++++|.+++.++
T Consensus 325 ~~~vrg~G~~~~i~~~~~~---~~~~~~~~~~l-~~~Gv~~~~~g----~~~lR~~p~~~~t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 325 FSEIRGKGLLIGAVLTEAY---QGKAKQFVNAA-AEEGVIALIAG----PNVVRFAPSLVISDDDIDEGLARFERAIEQV 396 (397)
T ss_pred eEeeecCceEEEEEEcCch---hhHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 11 1223444455553210 01245666666 55799987632 47899976 578999999999999998764
No 206
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.93 E-value=3.8e-23 Score=193.26 Aligned_cols=244 Identities=14% Similarity=0.146 Sum_probs=171.0
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL 135 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl 135 (419)
++.++.+.++...... .. ..|+. ..+...|+++||++. ..+++++++|+++|+..++.+++++||+|+
T Consensus 35 ~~~~~~~~~~~~~~~~-~~-~~Y~r~~npt~~~Le~~iA~le--------~~~~~~~~~sG~~Ai~~~l~all~~GD~Vv 104 (394)
T PRK09028 35 FDTVAEMRHAAKNRAN-GE-MFYGRRGTPTHFAFQAAIVELE--------GGAGTALYPSGAAAISNALLSFLKAGDHLL 104 (394)
T ss_pred cCCHHHHHHHhccCcc-CC-ceecCCCCchHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEE
Confidence 4555555554432211 11 24554 235579999999885 224789999999999999999999999999
Q ss_pred eeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 136 LPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 136 v~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
+++|.|.+.... +...|+++..++. .+.+.+++++++++++|++.+|+||||.+.+ +++|+++|++
T Consensus 105 v~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~-------~~~e~l~~~l~~~TklV~lespsNPtg~v~d---l~~I~~la~~ 174 (394)
T PRK09028 105 MVDSCYEPTRDLCDKILKGFGIETTYYDP-------MIGEGIRELIRPNTKVLFLESPGSITMEVQD---VPTLSRIAHE 174 (394)
T ss_pred EECCCcHHHHHHHHHhhhhcceEEEEECC-------CCHHHHHHhcCcCceEEEEECCCCCCCcHHH---HHHHHHHHHH
Confidence 999999776543 3456777766542 1457788888888999999999999988866 9999999999
Q ss_pred CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cc
Q 014769 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IY 289 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~ 289 (419)
+|+++|+|++|+... ...++ .++. .+++.|.+|+++.+| .-.|+++.++ ++.+.++.... ..
T Consensus 175 ~g~~lvvD~t~a~p~----~~~Pl-~~Ga---Divv~S~tK~l~Gh~d~~~G~~~~~~--------~~~~~l~~~~~~~G 238 (394)
T PRK09028 175 HDIVVMLDNTWASPI----NSRPF-EMGV---DISIQAATKYIVGHSDVMLGTATANE--------KHWDQLREHSYLMG 238 (394)
T ss_pred cCCEEEEECCccccc----cCCcc-ccCc---eEEEEeCCeEecCCCCEEEEEEECCH--------HHHHHHHHHHHhcC
Confidence 999999999998532 11122 3343 399999999986664 6677665432 34455554432 23
Q ss_pred cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 290 SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 290 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
...++...+.+..-|+. +.-+.++..++...+.+.|+++|.+..|..|
T Consensus 239 ~~~~p~~a~l~~rgl~T-----L~lR~~~~~~na~~la~~L~~~p~v~~V~yP 286 (394)
T PRK09028 239 QCTSPDDVYLAMRGLRT-----LGVRLAQHEKNALKVANWLATRPEVDHVRHP 286 (394)
T ss_pred CCCCHHHHHHHHcccCc-----HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 44555555544443333 6666777888888999999988766544444
No 207
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=1e-22 Score=192.51 Aligned_cols=311 Identities=22% Similarity=0.245 Sum_probs=223.6
Q ss_pred CChHHHHHHHHHHHhCCCCC----CCCC----CCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHh--
Q 014769 59 RTAVEAEDAIVDAVRSGKFN----CYAT----NSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVL-- 127 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~----~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l-- 127 (419)
+.++.+.+++.+.+.....+ .+.. ..-+.+.|+.+++++ +.++ ++|++++|++++++.++.++
T Consensus 10 ~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~l------g~~~~~~v~~~~~~t~a~~~~~~~l~~ 83 (371)
T PF00266_consen 10 PMPKSVLEAISDYLRNFYANPHSGVSHRSREFAEILEEAREALAKLL------GAPPDEEVVFTSNGTEALNAVASSLLN 83 (371)
T ss_dssp B-BHHHHHHHHHHHHHSGSSTSTSSSTTSHHHHHHHHHHHHHHHHHH------TSSTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhhhcCcccccchhhhhhHHHHHHHHHHHHhc------CCccccccccccccchhhhhhhhcccc
Confidence 56788999998886532111 1111 122357888888888 5677 89999999999999999999
Q ss_pred -cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769 128 -ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 128 -~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 202 (419)
.++||+|++.+-.|++.. ...+..|.++..++.+.+ ..+|++.+++.++++++++++++.+|.||..+| +
T Consensus 84 ~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~~~--~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~p---i 158 (371)
T PF00266_consen 84 PLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPADPG--GSLDLEDLEEALNPDTRLVSISHVENSTGVRNP---I 158 (371)
T ss_dssp HGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEGTT--SSCSHHHHHHHHHTTESEEEEESBETTTTBBSS---H
T ss_pred ccccccccccccccccccccccccccccchhhhcccccccc--chhhhhhhhhhhccccceEEeecccccccEEee---e
Confidence 789999999999998654 444577999998887543 368899999999999999999999999999999 9
Q ss_pred HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l 282 (419)
++|.++|+++|+++++|.+++.. .....+..++.+ ++++|.+|.++.+| +|++++++ +..+.+
T Consensus 159 ~~I~~~~~~~~~~~~vD~~~~~g----~~~id~~~~~~D---~~~~s~~Kl~gp~G--~g~l~v~~--------~~~~~~ 221 (371)
T PF00266_consen 159 EEIAKLAHEYGALLVVDAAQSAG----CVPIDLDELGAD---FLVFSSHKLGGPPG--LGFLYVRP--------EAIERL 221 (371)
T ss_dssp HHHHHHHHHTTSEEEEE-TTTTT----TSS--TTTTTES---EEEEESTSTTSSST--EEEEEEEH--------HHHHHH
T ss_pred ceehhhhhccCCceeEechhccc----cccccccccccc---eeeecccccCCCCc--hhhheehh--------hhhhcc
Confidence 99999999999999999999873 233334444433 78889999544445 79999876 344444
Q ss_pred Hhhh---------------------cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769 283 KDCL---------------------SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN 340 (419)
Q Consensus 283 ~~~~---------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 340 (419)
+... .+ .++++.+...++..+++.......++..++..++.+++.+.|.+++++....
T Consensus 222 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~ 301 (371)
T PF00266_consen 222 RPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLG 301 (371)
T ss_dssp HTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESS
T ss_pred ccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEee
Confidence 3110 01 2356777777777777765456778888999999999999999987766322
Q ss_pred ---CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------CCCeEEEEee--cCHHHHHHH
Q 014769 341 ---KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------LKNWLRIAFC--AEPSALKDG 404 (419)
Q Consensus 341 ---~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------~~~~~Ris~~--~~~~~l~~~ 404 (419)
.+..+..+.+.++. .+..++...| ++.||.+..|..+. ..+.+|+|++ .+++||+++
T Consensus 302 ~~~~~~~~~i~~~~~~~------~~~~~~~~~L-~~~~I~~~~G~~~~~~~~~~~~~~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 302 PDDEPRRPSIVSFNLPG------SDADDVVKYL-EERGIAVSTGSACAGPSLDILGMGGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp SSCGGBGTTEEEEEETT------SSHHHHHHHH-HHHTEEEEESTTTCHHHHHHHHTTTEEEEE-GTTSSHHHHHHH
T ss_pred ecccccccceEEEeecC------CCHHHHHHHH-hhcCEEEeccCcccHHHHHHhCCCCEEEEeccCCCCHHHHhhC
Confidence 12223344455543 2456666665 55699999987665 3589999995 588999874
No 208
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.93 E-value=3.1e-22 Score=188.12 Aligned_cols=348 Identities=12% Similarity=0.076 Sum_probs=230.3
Q ss_pred hCCchhHHHHHHHHHHhhhcC------------CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC--CCC
Q 014769 19 AAPAVTVKTSLASIIDSVNKN------------DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA--TNS 84 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~------------~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~ 84 (419)
+-...+....+.++...-++. +..++++|+..+ +..+..+|+++++..++++......-+ -..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~l~FsSnd---YLGL~~~p~v~~a~~~ai~~yG~g~~gSrl~~ 143 (476)
T PLN02955 67 SVSIPTFQKWLHDIPSNGEEIFSGDALAEERKGRFKKLLLFSGND---YLGLSSHPTISNAAANAAKEYGMGPKGSALIC 143 (476)
T ss_pred EechhhHHHHHHHHhcccccccCCCCccccccCCCceEEEeeccC---ccCCCCCHHHHHHHHHHHHHcCCCCCCcCccc
Confidence 344455555555555433321 134789999998 456788999999999988653211111 123
Q ss_pred CC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh--------------cCCCCeEEeeCCCCCCcHH
Q 014769 85 GI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL--------------ARPGANVLLPRPGWPYYEG 146 (419)
Q Consensus 85 g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l--------------~~~gd~vlv~~p~~~~~~~ 146 (419)
|. .+|++.+|+|+ ..+..++.+++..|...++.++ ..++|.|+.....|.+...
T Consensus 144 G~~~~h~~LE~~LA~f~--------g~e~all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~d 215 (476)
T PLN02955 144 GYTTYHRLLESSLADLK--------KKEDCLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIID 215 (476)
T ss_pred cChHHHHHHHHHHHHHH--------CCCcEEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHH
Confidence 44 67999999998 3467888888898888888877 2456788888888888887
Q ss_pred HHhhc----CCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 147 IAQRK----QVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 147 ~~~~~----g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
.++.. +.++..+++ -|++.|++.++. ..+.++++.+ .++.|.+.| +++|.++|+++|+++|+|
T Consensus 216 G~~ls~~~~~a~~~~f~H-------ND~~~Le~~L~~~~~~~~~Vv~EgV~SmdGdiap---L~eL~~L~~~~ga~LiVD 285 (476)
T PLN02955 216 GVRLAERQGNVEVFVYRH-------CDMYHLNSLLSSCKMKRKVVVTDSLFSMDGDFAP---MEELSQLRKKYGFLLVID 285 (476)
T ss_pred HHHhccccCCceEEEeCC-------CCHHHHHHHHHhCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCcEEEEc
Confidence 77766 456665553 277888777643 2234455554 789999999 899999999999999999
Q ss_pred ccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCch-H
Q 014769 220 EVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPT-F 295 (419)
Q Consensus 220 e~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~-~ 295 (419)
|+|+.+.++..+......++. .+..|+++||||++|+.| |++++++ ++++.++.... .+++..+ +
T Consensus 286 EAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~G---Gfi~gs~--------~~~~~l~~~~~~~ifStalpp~ 354 (476)
T PLN02955 286 DAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGCHG---GFIACSK--------KWKQLIQSRGRSFIFSTAIPVP 354 (476)
T ss_pred ccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhccC---ceeecHH--------HHHHHHHHhCCCCeecccccHH
Confidence 999988776533222222221 245689999999987777 9999876 57777775532 2233333 3
Q ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcC
Q 014769 296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375 (419)
Q Consensus 296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 375 (419)
...++.+.++.... -...+++++++.+++++. . |+. . + +.++.+.+... ....++..+| .++|
T Consensus 355 ~aaa~laal~l~~~--~~~~r~~L~~n~~~fr~~---~-G~~-~--~--sPI~pI~ig~~-----~~a~~~~~~L-~~~G 417 (476)
T PLN02955 355 MAAAAYAAVVVARK--EKWRRKAIWERVKEFKAL---S-GVD-I--S--SPIISLVVGNQ-----EKALKASRYL-LKSG 417 (476)
T ss_pred HHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHh---c-CCC-C--C--CCEEEEEeCCH-----HHHHHHHHHH-HHCC
Confidence 33344444433211 123567777887777774 2 554 2 1 33333434321 1234556666 5679
Q ss_pred eEeecCCCCCCC---CeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 376 VIVTPGIYVGLK---NWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 376 v~v~~g~~~~~~---~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
|.+.+..++..+ ..+||++ ..++++|+.+++.|.++....
T Consensus 418 i~v~~i~yPtVP~g~~rLRi~lsA~Ht~edId~lv~~L~~~~~~~ 462 (476)
T PLN02955 418 FHVMAIRPPTVPPNSCRLRVTLSAAHTTEDVKKLITALSSCLDFD 462 (476)
T ss_pred CEEEEECCCCCCCCCceEEEeeCCCCCHHHHHHHHHHHHHHHhhh
Confidence 999988777653 4699999 368999999999999887543
No 209
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.93 E-value=2.9e-23 Score=195.25 Aligned_cols=219 Identities=16% Similarity=0.154 Sum_probs=158.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH---hhcCCEE
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA---QRKQVEV 155 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~---~~~g~~~ 155 (419)
+|+. +...+|++.+++++ + .+++++++|+++|+..++.+++++||.|+++.|.|.+....+ ...|+++
T Consensus 49 r~~n-p~~~~lE~~lA~l~------g--~~~~l~~~sG~~Ai~~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~~~~g~~v 119 (385)
T PRK08574 49 REEN-PTLRPLEEALAKLE------G--GVDALAFNSGMAAISTLFFSLLKAGDRVVLPMEAYGTTLRLLKSLEKFGVKV 119 (385)
T ss_pred CCCC-ccHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHhhccCcEE
Confidence 3444 46789999999998 2 357888899999999999999999999999999999876555 3446666
Q ss_pred EEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 156 RHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
..+. ++.+.+++++++ ++++|++.+|+||||.+++ +++|+++|+++|+++|+|++|+.... ..+
T Consensus 120 ~~~~--------~d~~~l~~~i~~~~tklV~ie~p~NPtG~v~d---l~~I~~la~~~gi~livD~t~a~~~~----~~~ 184 (385)
T PRK08574 120 VLAY--------PSTEDIIEAIKEGRTKLVFIETMTNPTLKVID---VPEVAKAAKELGAILVVDNTFATPLL----YRP 184 (385)
T ss_pred EEEC--------CCHHHHHHhcCccCceEEEEECCCCCCCEecC---HHHHHHHHHHcCCEEEEECCCCcccc----CCh
Confidence 5542 367889999987 8999999999999999999 88999999999999999999965321 112
Q ss_pred ccccCCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHH
Q 014769 235 MGLFGSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 235 ~~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
+ ..+ ..+++.|++|.++.+|-. .|++++.+. ++.+.++.... +....++...+.+...++ .+
T Consensus 185 l-~~G---aDivv~S~sK~l~g~~d~~gG~vi~~~~-------~~~~~~~~~~~~~g~~~~p~~a~l~l~~l~-----tL 248 (385)
T PRK08574 185 L-RHG---ADFVVHSLTKYIAGHNDVVGGVAVAWSG-------EFLEELWEWRRRLGTIMQPFEAYLVLRGLK-----TL 248 (385)
T ss_pred h-hhC---CcEEEeeCceeecCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcccC-----cH
Confidence 2 222 248899999998777655 466666442 46666665543 233344443333333332 35
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
..+.++..++...+.+.|+++|.+.
T Consensus 249 ~~R~~~~~~na~~la~~L~~~p~v~ 273 (385)
T PRK08574 249 EVRFERQCRNAMAIAEFLSEHPKVA 273 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCcC
Confidence 5566666778888888888776554
No 210
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.93 E-value=9.3e-23 Score=194.86 Aligned_cols=353 Identities=16% Similarity=0.086 Sum_probs=214.2
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.-... .-.-+|.+.+++.+++.......+.. ...+.+..+++.+.+..+ +...+.++++++++
T Consensus 29 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~a~~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~v~f~~sGs 104 (420)
T TIGR00700 29 DVDGNRLIDFASGIAVLN-IGHSHPRVVDAVRTQVAEFTHTCFMV--TPYEGYVALAEKLNRIAP-GSGPKKSVFFNSGA 104 (420)
T ss_pred eCCCCEEEECccCHHhcc-CCCCCHHHHHHHHHHHHhccCccccc--cCChHHHHHHHHHHHhCC-CCCCCEEEEeCCcH
Confidence 346899999988843321 12357899999999987643322221 112334445555543221 11236899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCCC---------cccChHH
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPERN---------WEVDLDA 172 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~---------~~~~~~~ 172 (419)
+|++.+++.... .| .+|+....+|++....+..... .+..++...... +.-+++.
T Consensus 105 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (420)
T TIGR00700 105 EAVENAVKIARSYTGRPGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAA 184 (420)
T ss_pred HHHHHHHHHHHHhcCCCcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHH
Confidence 999999987643 23 6788899999987544333211 011122110000 0012445
Q ss_pred HHHhhc----CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769 173 VEALAD----KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246 (419)
Q Consensus 173 l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (419)
+++.+. .+..+.+|..| +.-+|.. .+.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++....
T Consensus 185 ~~~~~~~~~~~~~iAavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~-~a~~~~~~~pD--- 260 (420)
T TIGR00700 185 ARAIFVIDVGANNVAALVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAM-FACEHEGPEPD--- 260 (420)
T ss_pred HHHHHHhhcCCCcEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchh-HHHhhcCCCCC---
Confidence 655542 23445566677 5567775 46677999999999999999999999998776642 22222322222
Q ss_pred EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHH-HHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL-RESAE 324 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~-~~~~~ 324 (419)
+.++||.++ +|+|+||+++++ ++++.+... ...+++.+++++.++.+.++....+.+.++..++ ...++
T Consensus 261 i~~lsK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~g~~l~~ 331 (420)
T TIGR00700 261 LITTAKSLA-DGLPLSGVTGRA--------EIMDAPAPGGLGGTYAGNPLACAAALAVLAIIESEGLIERARQIGRLVTD 331 (420)
T ss_pred EEEeecccc-CCcceEEEEecH--------HHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 336899976 899999999975 576666533 2345678889998887777542222222222222 22333
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS 399 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~ 399 (419)
.+.+....+|.+..+ .+. |.++++.+.... ....+ ...+...+ .++||.+.|+..|+ +++|+++. .+++
T Consensus 332 ~L~~l~~~~~~~~~v-rg~-G~~~~i~~~~~~-~~~~~~~~~~~l~~~~-~~~Gv~i~p~~~f~--~~lRl~p~l~~~~~ 405 (420)
T TIGR00700 332 RLTTLKAVDPRIGDV-RGL-GAMIAVELVDPG-TTEPDAGLAERIATAA-HAAGLLLLTCGMFG--NIIRFLPPLTIGDE 405 (420)
T ss_pred HHHHHHhhCCCEEEe-ecc-ceEEEEEEecCC-CCCccHHHHHHHHHHH-HHCCeEEeccCCCC--CEEEEECCCCcCHH
Confidence 333333334444423 344 777788773210 00011 22333333 57899999987764 79999984 5899
Q ss_pred HHHHHHHHHHHHHH
Q 014769 400 ALKDGLGRMKAFCQ 413 (419)
Q Consensus 400 ~l~~~l~~l~~~~~ 413 (419)
+|++++++|.+++.
T Consensus 406 ~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 406 LLSEGLDILCAILA 419 (420)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999874
No 211
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.93 E-value=2e-22 Score=194.03 Aligned_cols=355 Identities=14% Similarity=0.108 Sum_probs=216.1
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.-... .-.-+|.+.+++.++++....... .....+.+..+++.+....+.+ ..+.++++++|+
T Consensus 50 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~--~~~~~~~~~~la~~L~~~~p~~-~~~~v~f~~sGs 125 (451)
T PRK06918 50 DVDGNQYIDFAGAIGTIN-VGHSHPKVKEALHKQVDQYIHTGF--NVMMYEPYIELAEKLAALAPGS-FDKKVLFLNSGA 125 (451)
T ss_pred eCCCCEEEEcCCchhhcC-CCCCCHHHHHHHHHHHHhccCccc--cccccHHHHHHHHHHHHhCCCC-CCCEEEEcCCcH
Confidence 346888999988853322 123578999999999876432111 1112344555566555433211 125899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCCE--------------EEEEeccCC--CCcccC--------hH
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQVE--------------VRHFDLLPE--RNWEVD--------LD 171 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~~--------------~~~~~~~~~--~~~~~~--------~~ 171 (419)
+|++.+++.... .| .+|+....+|++....+...... +..++.... ...... ++
T Consensus 126 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (451)
T PRK06918 126 EAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIE 205 (451)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHH
Confidence 999999987642 23 67888999999875444332110 111111100 000110 12
Q ss_pred HHHHhh----cCCccEEEEeCCCCcc-cc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 172 AVEALA----DKNTAAMVIINPGNPC-GN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 172 ~l~~~~----~~~~~~v~i~~p~npt-G~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
.+++.+ ..+..+.+|+.|-... |. ..+.+++++|.++|+++|+++|+||+|.++.+.+.. .++..++..+.
T Consensus 206 ~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~-~a~~~~~v~pD-- 282 (451)
T PRK06918 206 EFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFARTGKY-FAIEHFDVVPD-- 282 (451)
T ss_pred HHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCcCccCce-ehhHhcCCCCC--
Confidence 233322 2345677788885443 65 456777999999999999999999999998776643 23344442222
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
+.|+||.++ +|+|+||+++++ ++++.+.... ..+++.+++.+.++.++++....+.+.++. ++..+
T Consensus 283 -i~t~sK~l~-~G~pig~v~~~~--------~i~~~~~~~~~~~T~~g~~l~~aaa~a~l~~i~~~~~~~~~---~~~g~ 349 (451)
T PRK06918 283 -LITVSKSLG-AGVPISGVIGRK--------EIMDESAPGELGGTYAGSPLGCAAALAVLDIIEKENLNDRA---IELGK 349 (451)
T ss_pred -EEeeehhhc-CCCccEEEEEcH--------HHHhccCCCCcCcCCCcCHHHHHHHHHHHHHHHHCCHHHHH---HHHHH
Confidence 338999975 899999999975 5666665332 345678899998877777643222233322 22223
Q ss_pred HHHHHhh----cCCCCCCCCCCCceEEEEeecCcc--cccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769 325 ICYDGVK----EIPCISCPNKPEGSMVTMVKLNPW--LLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA 396 (419)
Q Consensus 325 ~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~--~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~ 396 (419)
.+.+.|+ +++.+..+ .+.|+++.|....+. ..+.......+...+ .++||.+.|+..|+ +++|+++ ..
T Consensus 350 ~l~~~l~~l~~~~~~~~~v-rg~G~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~Gvlv~~~~~~~--~~lrl~p~l~~ 425 (451)
T PRK06918 350 VVMNRFEEMKNKYNCIGDV-RGLGAMCAFELVQDRKTKEPDKTLTANICKEA-NKRGLLLLSAGTYG--NVIRVLMPLVI 425 (451)
T ss_pred HHHHHHHHHHhhCCCceee-ccceeEEEEEEccCCCcCCCcHHHHHHHHHHH-HHCCeEEeecCCCC--CEEEEECCCcc
Confidence 3333332 33333323 566777776543211 000000122333333 67899999986653 7899998 36
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q 014769 397 EPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~~~~ 416 (419)
++++|++++++|.+++++..
T Consensus 426 t~~~id~~l~~l~~~l~~~~ 445 (451)
T PRK06918 426 TDEQLEEGLTIIEESLQACY 445 (451)
T ss_pred CHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999998763
No 212
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.92 E-value=7.1e-23 Score=193.20 Aligned_cols=295 Identities=16% Similarity=0.125 Sum_probs=195.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g 152 (419)
+.+|++ +...+|++.++++. +.+++++++|+++|+..++.+++++||+|++++|+|..+.. .+...|
T Consensus 59 Y~r~~~-pt~~~Le~~lA~l~--------g~~~~l~~~sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~G 129 (394)
T PRK07050 59 YGLHAT-PTSLALAQRLAEIE--------GGRHALLQPSGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFG 129 (394)
T ss_pred cCCCCC-HHHHHHHHHHHHHh--------CCCeEEEeccHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcC
Confidence 455654 35678888888886 24689999999999999999999999999999999997653 456678
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++.. +.+.+++++++++++|++++|+||+|... ++++|.++|+++|+++|+|++|....+ .
T Consensus 130 i~v~~vd~~-------~~~~l~~~i~~~tklV~le~p~Np~~~~~---di~~I~~ia~~~gi~livD~a~a~~~~----~ 195 (394)
T PRK07050 130 ITVRFYDPL-------IGAGIADLIQPNTRLIWLEAPGSVTMEVP---DVPAITAAARARGVVTAIDNTYSAGLA----F 195 (394)
T ss_pred eEEEEECCC-------CHHHHHHhcCCCCeEEEEECCCCCCccHh---hHHHHHHHHHHcCCEEEEECCcccccc----c
Confidence 888876531 34678888888999999999999997655 499999999999999999999976332 1
Q ss_pred CCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++ ..+ ..+++.|++|.++. .+.+.|++++.++ ++.++++.... ...+.++.....+...++
T Consensus 196 ~~l-~~G---aDi~v~S~tK~~~g~~~~~gG~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~lr~l~----- 259 (394)
T PRK07050 196 KPF-EHG---VDISVQALTKYQSGGSDVLMGATITADA-------ELHAKLKLARMRLGIGVSADDCSLVLRGLP----- 259 (394)
T ss_pred CHH-HcC---CeEEEEECCceecCCCCeeEEEEEECCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCCC-----
Confidence 111 122 24889999999653 3467898887552 46677765554 234445544433333232
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (419)
.+..+.++..++...+.+.|+++|.+..+..|. .|..+.+.+.... ...+..++++.+ +..
T Consensus 260 tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~--~~~~~~~~~~~l-~~~ 336 (394)
T PRK07050 260 SLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERY--SPAQVDAFVEAL-ELF 336 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCC--CHHHHHHHHHcC-CCC
Confidence 244455666677778888888776554332221 1223334453210 001234555544 555
Q ss_pred CeEeecCCCCC-----------------CCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 375 SVIVTPGIYVG-----------------LKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 375 gv~v~~g~~~~-----------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
++.++-|.... ..+.+|||+|.+ +.+.+++.|.+++.+.
T Consensus 337 ~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~svGlE--~~~dl~~dl~~al~~~ 392 (394)
T PRK07050 337 AIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYIGLE--DEADLIADLEQALEAA 392 (394)
T ss_pred eeccccCCccceEeeCcccccchhhcCCCCCEEEEEeCcC--CHHHHHHHHHHHHHHh
Confidence 55443333211 025799999974 4566677777776654
No 213
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.92 E-value=2.8e-22 Score=189.05 Aligned_cols=328 Identities=14% Similarity=0.069 Sum_probs=202.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC-------CCCCCC------CCCCCHHHHHHHHHHHHhhCCCCCCC
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-------KFNCYA------TNSGIPPARRAIADYLSRDLPYKLSA 107 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-------~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~ 107 (419)
...+++|+..+ +.++..++.+.+++.+++... .....+ ...-+.++|+.+++++ +. +
T Consensus 3 ~~~~~~~~s~~---YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~------~~-~ 72 (370)
T PRK05937 3 ESLSIDFVTND---FLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFH------GA-P 72 (370)
T ss_pred CCceEEeECCC---ccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHh------CC-C
Confidence 56789999997 456677788888888776542 111111 1223567888888887 33 2
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------Cc
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NT 181 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~ 181 (419)
+.+++++|. .++..+...+.++||.|++..-.|......+.........++ ..|++.+++.++. ++
T Consensus 73 ~~l~~~sG~-~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~~~~~~~~ 144 (370)
T PRK05937 73 EAFIVPSGY-MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGWHQSFR-------HNDLDHLESLLESCRQRSFGR 144 (370)
T ss_pred eEEEECChH-HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHHcCCceEEec-------CCCHHHHHHHHHhhhccCCCc
Confidence 335555555 556566666667888888878888776666655432222332 2478888887752 34
Q ss_pred cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769 182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF 261 (419)
Q Consensus 182 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 261 (419)
.+|++++++|++|.+.| +++|.++|+++|+++++|++|+...++.........++..+..+++.||||.++..| .
T Consensus 145 ~~v~v~~v~s~~G~i~p---l~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~g~~G--~ 219 (370)
T PRK05937 145 IFIFVCSVYSFKGTLAP---LEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMG--A 219 (370)
T ss_pred EEEEEecCCCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhhhcCc--e
Confidence 56678899999999999 889999999999999999999975443221111111221112356789999988777 3
Q ss_pred EEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 014769 262 GWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISC 338 (419)
Q Consensus 262 G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 338 (419)
| ++..+ +....+... ..+..+.+++...++.++++..... .+..++++++.++++.+.|... +
T Consensus 220 ~-vl~~~--------~~~~~~~~~~~~~~~s~~~~~~~~~a~~aal~~l~~~-~~~~~~~l~~l~~~l~~~l~~~-~--- 285 (370)
T PRK05937 220 A-LLSSS--------EVKQDLMLNSPPLRYSTGLPPHLLISIQVAYDFLSQE-GELARKQLFRLKEYFAQKFSSA-A--- 285 (370)
T ss_pred E-EEcCH--------HHHHHHHHhCCCCeecCCCCHHHHHHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHhcCCC-C---
Confidence 3 33332 344444321 1223345566655555555432111 1334567777777777766532 1
Q ss_pred CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 339 PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 339 ~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+..... +.++. .+...+... |.++||.+.... +...+++|++++ .+++|++.+++.|+++++++-
T Consensus 286 ---~~~~~~--i~~~~------~~~~~~~~~-L~~~gi~v~~~~-~~~~~~iRis~~~~~t~edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 286 ---PGCVQP--IFLPG------ISEQELYSK-LVETGIRVGVVC-FPTGPFLRVNLHAFNTEDEVDILVSVLATYLEKYQ 352 (370)
T ss_pred ---CCCEEE--EEeCC------hhHHHHHHH-HHHCCeeEEeeC-CCCCCEEEEEcCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 111111 22332 124445444 477899886422 223568999995 689999999999999998875
Q ss_pred cc
Q 014769 417 KK 418 (419)
Q Consensus 417 ~~ 418 (419)
++
T Consensus 353 ~~ 354 (370)
T PRK05937 353 KN 354 (370)
T ss_pred CC
Confidence 53
No 214
>PRK05968 hypothetical protein; Provisional
Probab=99.92 E-value=1.2e-22 Score=191.67 Aligned_cols=290 Identities=17% Similarity=0.109 Sum_probs=195.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g 152 (419)
+.+|+.+ -..+|++.++++. +. +..+++++++.|+..++.+++++||+|+++.+.|.+. ...+...|
T Consensus 57 Y~r~~~p-~~~~le~~lA~l~------g~--~~av~~~sG~~Ai~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 127 (389)
T PRK05968 57 YSRGDNP-TVRAFEEMLAKLE------GA--EDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMG 127 (389)
T ss_pred ccCCCCh-hHHHHHHHHHHHh------CC--CcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcC
Confidence 3344443 3679999999987 22 3445566778899999999999999999999999863 34556678
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++ +++++|++.+|+||++. ..++++|.++|+++|+++|+|++|....+..
T Consensus 128 ~~v~~vd~-------~d~~~l~~~i-~~tklV~ie~pt~~~~~---~~dl~~i~~la~~~gi~vivD~a~a~~~~~~--- 193 (389)
T PRK05968 128 VEVDYVDG-------RDEEAVAKAL-PGAKLLYLESPTSWVFE---LQDVAALAALAKRHGVVTMIDNSWASPVFQR--- 193 (389)
T ss_pred ceEEEeCC-------CCHHHHHHhc-ccCCEEEEECCCCCCCc---HHHHHHHHHHHHHcCCEEEEECCCcchhccC---
Confidence 88887753 2788898888 46889999877776654 4569999999999999999999997654321
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccch
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
++ ..+. .+++.|++|.++.+| .+.|+++.+. +++++++.... .....++..+..+...|+.
T Consensus 194 -p~-~~g~---Divv~S~tK~l~g~~~~~gG~i~~~~--------~~~~~l~~~~~~~~g~~~~~~~A~~~l~~L~t--- 257 (389)
T PRK05968 194 -PI-TLGV---DLVIHSASKYLGGHSDTVAGVVAGSK--------EHIARINAEAYPYLGAKLSPFEAWLLLRGLRT--- 257 (389)
T ss_pred -ch-hcCC---cEEEeeccccccCCCCeEEEEEEECH--------HHHHHHHHHHHHhCCCCCChHHHHHHHcccCc---
Confidence 12 1222 378889999987765 5788888654 46666664322 2234555555544444432
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEe
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE-----------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIV 378 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 378 (419)
+..+.++..++...+.+.|+++|++..+..|. .|..+.+.++.. .+..+|++.| +..++.+
T Consensus 258 --l~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~~~~-----~~~~~f~~~L-~~~~~~~ 329 (389)
T PRK05968 258 --LPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIFREG-----IDVRAFADAL-KLFRLGV 329 (389)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEECCH-----HHHHHHHHhC-CccEEec
Confidence 45566666777888889999888876454441 232444556421 1356677666 5556655
Q ss_pred ecCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 379 TPGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 379 ~~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+-|.... . ++.+|+|++.. +.+.+++.|++++.+.
T Consensus 330 s~G~~~slv~p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE--~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 330 SWGGHESLVVPAEVVLQQKAQPNSAARFGVSPRSVRLHVGLE--GTEALWADLEQALAAA 387 (389)
T ss_pred CCCCCCceeeeCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHHh
Confidence 5444332 1 46899999873 4566666777766543
No 215
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.92 E-value=1.4e-22 Score=193.22 Aligned_cols=349 Identities=15% Similarity=0.128 Sum_probs=221.6
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|.-+.. .-.-+|.+.+++.+++.......+.. ...+....+++.+....+ ....+.++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~sGs 111 (421)
T PRK06777 36 DVEGREYIDFAAGIAVLN-TGHRHPKVVAAVRQQLDQFTHTAYQI--VPYASYVTLAERINALAP-IDGPAKTAFFTTGA 111 (421)
T ss_pred eCCCCEEEEcccCHHhhc-cCCCCHHHHHHHHHHHhhcccccccc--cCChHHHHHHHHHHHhCC-CCCCceEEEeCCcH
Confidence 446899999988843221 12357899999999987643322221 112333445555543222 11246899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CCE-------------EEEEeccCCCCc----ccChHHHHHhh
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QVE-------------VRHFDLLPERNW----EVDLDAVEALA 177 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~----~~~~~~l~~~~ 177 (419)
+|++.+++.... .| .+|+....+|++....+... +.. +..++. ++... ..+++.+++.+
T Consensus 112 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~l~~~~ 190 (421)
T PRK06777 112 EAVENAVKIARAYTGRPGVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALY-PNELHGVSVEEALSSVERLF 190 (421)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCC-CccccCcCHHHHHHHHHHHH
Confidence 999999987643 23 57889999999875444322 210 011111 11000 11255566666
Q ss_pred c----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCC
Q 014769 178 D----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (419)
Q Consensus 178 ~----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 251 (419)
. .+..+.++..| ++..|. +.|.+++++|.++|+++|+++|+||+|.++.+.|.. .....++..+.++ ++|
T Consensus 191 ~~~~~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~-~~~~~~~~~pDiv---~~s 266 (421)
T PRK06777 191 KADIAPDQVAAILLEPIQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKL-FAMEYYDVKPDLI---TMA 266 (421)
T ss_pred HhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCch-hhhhhcCCCCCEE---eee
Confidence 4 13345556666 677785 689999999999999999999999999988776643 2333333333333 789
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
|.++ +|+|+||+++++ ++++.+.... ..+++.+++.+.++.++|+.... +...++++++.+++.+.|
T Consensus 267 K~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L 334 (421)
T PRK06777 267 KSLG-GGMPISAVVGRA--------EVMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVL 334 (421)
T ss_pred hhhc-CCCceEEEEEcH--------HHHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHH
Confidence 9986 899999999875 5666665432 34567799999999999875322 345566666677777766
Q ss_pred hc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHH---HHhcCeEeecCCCCCCCCeEEEEe--ecCHHHH
Q 014769 331 KE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKL---AKEESVIVTPGIYVGLKNWLRIAF--CAEPSAL 401 (419)
Q Consensus 331 ~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~l---l~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l 401 (419)
++ .|.+. ...+.|.++. +.+.... .+ .++.++...+ +.++||.+.|+..|+ +++||++ ..+++++
T Consensus 335 ~~l~~~~~~i~-~vrg~G~~~~-i~~~~~~-~~-~~~~~~~~~l~~~~~~~Gv~i~~~~~~g--~~lr~~ppl~i~~~~i 408 (421)
T PRK06777 335 EKAKASCPAIV-DIRARGSMVA-VEFNDPQ-TG-KPSPEFTRQYQRQALEEGLLLLSCGVHG--NVIRFLYPLTIPDAQF 408 (421)
T ss_pred HHHHHhCCCeE-EecCceEEEE-EEEecCc-cC-CccHHHHHHHHHHHHhCCeEEeecCCCC--CEEEEeCCCCCCHHHH
Confidence 65 34333 2256666664 3342210 00 1122232222 356899999987664 6999999 5799999
Q ss_pred HHHHHHHHHHHH
Q 014769 402 KDGLGRMKAFCQ 413 (419)
Q Consensus 402 ~~~l~~l~~~~~ 413 (419)
++++++|.+++.
T Consensus 409 ~~~~~~l~~~l~ 420 (421)
T PRK06777 409 SKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHh
Confidence 999999998874
No 216
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.92 E-value=3.7e-22 Score=190.33 Aligned_cols=353 Identities=13% Similarity=0.097 Sum_probs=219.2
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-+.. .-.-+|.+.+++.+++.......+.. ...+....+++.+.+..+ ....+.++++++
T Consensus 34 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~--~~~~~~~~la~~l~~~~p-~~~~~~~~f~~s 109 (421)
T PRK09792 34 LKDVEGNEYIDFAAGIAVLN-TGHRHPDLVAAVEQQLQQFTHTAYQI--VPYESYVTLAEKINALAP-VSGQAKTAFFTT 109 (421)
T ss_pred EEeCCCCEEEEccCchhhhc-CCCCCHHHHHHHHHHHHhccCcccCc--cCCHHHHHHHHHHHHhCC-CCCCceEEEeCC
Confidence 33456889999988843322 12358999999999987643222211 123444455555544222 112368999999
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCccc----ChHHHHH
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNWEV----DLDAVEA 175 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~----~~~~l~~ 175 (419)
+++|++.+++.... .| .+|+....+|++....+... +. .+..++..... ..+ +++.+++
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~-~~~~~~~~~~~l~~ 188 (421)
T PRK09792 110 GAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDL-HGISTQDSLDAIER 188 (421)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccc-ccccHHHHHHHHHH
Confidence 99999999987653 23 57899999999864333222 11 01222221111 011 2466777
Q ss_pred hhc----CCccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769 176 LAD----KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (419)
Q Consensus 176 ~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 249 (419)
.+. .+..+.++..| ++|+|..+ |.+++++|.++|+++|+++|+||++.++.+.|.. ..+..++..+. +.+
T Consensus 189 ~~~~~~~~~~iaavi~EPvq~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~-~a~~~~~~~pD---i~t 264 (421)
T PRK09792 189 LFKSDIEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKL-FAMDHYADKPD---LMT 264 (421)
T ss_pred HHHhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCch-hHHHhcCCCCc---EEE
Confidence 665 23344555555 78999865 9999999999999999999999999998777653 23333432222 458
Q ss_pred CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHH
Q 014769 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICY 327 (419)
Q Consensus 250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~ 327 (419)
|||.+ .+|+|+||+++++ ++++.+.... ..+++.+++.+.++.+.++.... +.+++.+ .+.++.....
T Consensus 265 ~gK~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~~~~~~~~-~~g~~l~~~l 334 (421)
T PRK09792 265 MAKSL-AGGMPLSGVVGNA--------NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDKESLCERAN-QLGQRLKNTL 334 (421)
T ss_pred eehhh-cCCCceEEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHH-HHHHHHHHHH
Confidence 89996 5899999999865 5666554332 33567888888877666664332 2233322 3333333333
Q ss_pred HHhh-cCCCCCCCCCCCc-eEEEEeecCccccc--CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHH
Q 014769 328 DGVK-EIPCISCPNKPEG-SMVTMVKLNPWLLE--DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSAL 401 (419)
Q Consensus 328 ~~l~-~~~~~~~~~~p~~-g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l 401 (419)
+.|. ++|.+ ..+.+ |+++|+.+++.... .......+...+ .++||.+.+... ..+.+|+.+. .+++++
T Consensus 335 ~~l~~~~p~v---~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~l~~~~-~~~Gv~i~~~g~--~~~~irl~P~l~i~~~ei 408 (421)
T PRK09792 335 IDAKESVPAI---AAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRA-LAQGLLLLTCGA--YGNVIRFLYPLTIPDAQF 408 (421)
T ss_pred HHHHHhCCCc---ceecccceEEEEEecCCccCCcchHHHHHHHHHH-HHCCcEEeecCC--CCCEEEEeCCCcCCHHHH
Confidence 3333 24432 25566 99999999642100 001123455555 557999864321 2578999973 689999
Q ss_pred HHHHHHHHHHHH
Q 014769 402 KDGLGRMKAFCQ 413 (419)
Q Consensus 402 ~~~l~~l~~~~~ 413 (419)
++++++|.++++
T Consensus 409 ~~~~~~l~~~l~ 420 (421)
T PRK09792 409 DAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHh
Confidence 999999999875
No 217
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=4.8e-22 Score=180.78 Aligned_cols=333 Identities=19% Similarity=0.177 Sum_probs=244.0
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~ 137 (419)
.+.++.+++++.+.+- +...+ -...+-+.+.+.++..++.. +.+-++++++++.+++.++.++..|||+|++.
T Consensus 14 ~~v~~~V~~am~~~~~----~h~s~--~F~~~~~~~~~~L~~v~~t~-~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 14 VPVPPRVLLAMARPMV----GHRSP--DFVGIMKEVLEKLRKVFGTE-NGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCCCHHHHHHhcCCCC----CCCCH--HHHHHHHHHHHHHHHHhcCC-CCcEEEEcCCcHHHHHHHHHhccCCCCeEEEE
Confidence 4678888888765442 22333 23445555555555555533 34667888999999999999999999999999
Q ss_pred CCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769 138 RPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (419)
Q Consensus 138 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (419)
..+.++ +.++++.+|.++..+... .+-.+++++++++++. +.+.|.+++.-.+||+..| +++|.++|++|+
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~~~~--wg~~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnp---l~~I~~~~k~~g 161 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVLEVE--WGEAVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNP---LKEIAKAAKEHG 161 (383)
T ss_pred eCChHHHHHHHHHHHhCCceEEEeCC--CCCCCCHHHHHHHHhcCCCccEEEEEeccCcccccCc---HHHHHHHHHHcC
Confidence 888876 468899999999988764 4557899999999984 4678899999999999999 999999999999
Q ss_pred CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC-----------CccchhhHHHHH
Q 014769 214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN-----------GIFQKSGIIDSI 282 (419)
Q Consensus 214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-----------~~~~~~~~~~~l 282 (419)
.++|+|.+-+. |.....+..++-| +++++..|.++.| ..+|++..++.. -.++-....+.+
T Consensus 162 ~l~iVDaVsS~----Gg~~~~vd~wgiD---v~itgSQK~l~~P-PGla~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~ 233 (383)
T COG0075 162 ALLIVDAVSSL----GGEPLKVDEWGID---VAITGSQKALGAP-PGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYM 233 (383)
T ss_pred CEEEEEecccC----CCcccchhhcCcc---EEEecCchhccCC-CccceeEECHHHHHHHhcCCCCceeecHHHHHHHH
Confidence 99999999885 2233344455544 8888889997653 337777775421 112111122222
Q ss_pred HhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCC
Q 014769 283 KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 283 ~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~ 360 (419)
.....+.++++....+++.++|+....+.++.+.++++.+.+.+++.++++ |++.+..+. ......+..|.. .
T Consensus 234 ~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~P~g----~ 308 (383)
T COG0075 234 EKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKVPEG----V 308 (383)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEECCCC----C
Confidence 222345678888888999999988778889999999999999999999998 777443221 122333445542 2
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHHHHh
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++.+....+++++|+.+.+|........+||+. + .+..++..++..|..+++++.
T Consensus 309 -~~~~~~~~~~~~~g~~i~gg~~~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 309 -DDKKVRRALLKEYGVEIAGGQGPLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred -CcHHHHHHHHHhCCEEecccccccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 344444578899999999888777788999998 5 588999999999999998763
No 218
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=1.7e-22 Score=181.87 Aligned_cols=345 Identities=16% Similarity=0.161 Sum_probs=232.6
Q ss_pred hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
...+|+.+|||..|..... .-..+|.+.+++.++++.-.. +.|. .+.+..+++.|.+.. + ..+.|++++
T Consensus 37 ~D~~G~~YlDf~~Giav~~-lGH~hP~iv~al~~Q~~kl~h~sn~~~-----~~~~~~la~~L~~~s--~-~~d~vff~N 107 (404)
T COG4992 37 WDQQGREYLDFAAGIAVNN-LGHCHPALVEALKEQAEKLWHVSNLFY-----NEPQAELAEKLVELS--P-FADRVFFCN 107 (404)
T ss_pred ECCCCCEeeeeccceeeec-cCCCCHHHHHHHHHHHHHhhhcccccC-----ChHHHHHHHHHHhhC--c-cccEEEEcC
Confidence 3456899999999854422 224689999999998875321 2232 234555555554422 2 378999999
Q ss_pred cHHHHHHHHHHHhcCC-----CCeEEeeCCCCCCcHHHHhhcCCEEEEE----eccCCCCcc--cChHHHHHhhcCCccE
Q 014769 115 GCKQAVEVILSVLARP-----GANVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE--VDLDAVEALADKNTAA 183 (419)
Q Consensus 115 g~~~al~~~~~~l~~~-----gd~vlv~~p~~~~~~~~~~~~g~~~~~~----~~~~~~~~~--~~~~~l~~~~~~~~~~ 183 (419)
|++||++.++.....- ..+|+....+|++-.-.+...+.+..+. |+.+.-.+- =|++++++++++++.+
T Consensus 108 SGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taA 187 (404)
T COG4992 108 SGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAA 187 (404)
T ss_pred CcHHHHHHHHHHHHHHcCCCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEE
Confidence 9999999999887532 2488888888887543333333332111 222211100 1789999999988777
Q ss_pred EEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE
Q 014769 184 MVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG 262 (419)
Q Consensus 184 v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G 262 (419)
|++-..+...|+. .+.++++++.++|++||+++|.||++.++..+|+-+ ....++..++++ ++.|.+ ..|+++|
T Consensus 188 vivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~f-A~e~~gV~PDI~---tlaK~L-gGG~Pig 262 (404)
T COG4992 188 VIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLF-AYEHYGVEPDIL---TLAKAL-GGGFPIG 262 (404)
T ss_pred EEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHH-HHHHhCCCCCEE---Eeeccc-cCCccce
Confidence 7777668888875 688999999999999999999999999988777543 223333333344 567995 5679999
Q ss_pred EEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----CCCCC
Q 014769 263 WLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----IPCIS 337 (419)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~~~ 337 (419)
.+++++ ...+.+.... ..+++.|+++..++.++++....+. ..++.+++.+++.+.|++ .| +.
T Consensus 263 A~la~~--------~~~~~~~~G~HgSTfGGNpLacAv~~a~l~~l~~e~---ll~~v~~~g~~~~~~L~~l~~~~~-~v 330 (404)
T COG4992 263 AMLATE--------EIASAFTPGDHGSTFGGNPLACAVALAVLEVLLEEG---LLENVREKGEYLLQRLRELKRRYP-LV 330 (404)
T ss_pred eeEEch--------hhhhcCCCCcccCCCCcCHHHHHHHHHHHHHHcchh---HHHHHHHHHHHHHHHHHHHhhcCC-ce
Confidence 999864 3444444433 3467889999988888887644322 233444555555555554 33 21
Q ss_pred CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.....-|+++-+.+.... ...+++..+ .++|+++.+.. ++.+|+.+ ..++++++++++++++++.+.
T Consensus 331 -~~vRG~GLmiGiel~~~~-----~a~~~~~~~-~~~gvL~~~a~----~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 331 -KEVRGRGLMIGIELKEPY-----RARDIVRAL-REEGVLVLPAG----PNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred -eeeecceeEEEEEecCcc-----cHHHHHHHH-HHCCeEEecCC----CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 223345788877776421 256676666 77899998765 56999998 469999999999999999876
Q ss_pred hcc
Q 014769 416 TKK 418 (419)
Q Consensus 416 ~~~ 418 (419)
..+
T Consensus 400 ~~~ 402 (404)
T COG4992 400 SAR 402 (404)
T ss_pred hhc
Confidence 543
No 219
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.92 E-value=9e-23 Score=184.54 Aligned_cols=205 Identities=18% Similarity=0.186 Sum_probs=168.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh----CCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR----SGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYV 112 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~----~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (419)
..+.+.+.|+.+.. .|.++.|.+++...+. +++...|+. ..+..+.|+.+|+++ +.++.+|+|
T Consensus 39 ~~~~~~vyld~~at-----~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklI------nAd~~dIiF 107 (428)
T KOG1549|consen 39 HHGTRPVYLDNQAT-----GPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLI------NADPSDIVF 107 (428)
T ss_pred cCCCccEEEecCcC-----CCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHh------CCCCCcEEE
Confidence 44777888888853 3567888888887654 333323554 334789999999999 678889999
Q ss_pred cccHHHHHHHHHHHhcC-CCC----eEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 113 TLGCKQAVEVILSVLAR-PGA----NVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~-~gd----~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
|+|+|++++++++.+.. ++| .|++.+-.|+.... .++..|+.++++|+. ...-+|++.+++.++++|+++
T Consensus 108 ts~ATEs~Nlvl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~--~~~~~d~~~~~~~i~~~T~lv 185 (428)
T KOG1549|consen 108 TSGATESNNLVLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVE--DSGLVDISKLREAIRSKTRLV 185 (428)
T ss_pred eCCchHHHHHHHHHhhccccccccceEEEecccCcchhHHHHHHHhcCeEEEEeccC--ccccccHHHHHHhcCCCceEE
Confidence 99999999999999854 456 89998888887654 446668999999986 345689999999999999999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
.+.+.+|.+|+++| +++|+++|+++++.+++|.+++- |.-...+..++.+ +...|.+|+||.+| +|++
T Consensus 186 ~I~~Vnn~~gv~~P---v~EI~~icr~~~v~v~~DaAQav----G~i~vDV~eln~D---~~s~s~HK~ygp~~--iGaL 253 (428)
T KOG1549|consen 186 SIMHVNNEIGVLQP---VKEIVKICREEGVQVHVDAAQAV----GKIPVDVQELNAD---FLSISAHKIYGPPG--IGAL 253 (428)
T ss_pred EEEecccCcccccc---HHHHHHHhCcCCcEEEeehhhhc----CCccccHHHcCch---heeeecccccCCCc--ceEE
Confidence 99999999999999 99999999999999999999997 5566666677665 66668999999999 9999
Q ss_pred EeeC
Q 014769 265 VTND 268 (419)
Q Consensus 265 ~~~~ 268 (419)
+++.
T Consensus 254 Yvr~ 257 (428)
T KOG1549|consen 254 YVRR 257 (428)
T ss_pred EEcc
Confidence 9985
No 220
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.92 E-value=7.3e-22 Score=186.99 Aligned_cols=349 Identities=12% Similarity=0.075 Sum_probs=227.0
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|.-... .-.-+|.+.+++.+++..... +.. .-..+....+++.+....+ ..+.++++++++
T Consensus 36 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~--~~~-~~~~~~~~~la~~L~~~~~---~~~~v~f~~sGs 108 (408)
T PRK04612 36 DDQGREYLDLAAGIAVCG-LGHNDPDLVAALTEQAGKLWH--TSN-VFYSAPPLKLAEELVTASR---FAEKVFLCNSGT 108 (408)
T ss_pred ECCCCEEEEcCccHhhcc-CCCCCHHHHHHHHHHHHhccc--ccc-ccCCHHHHHHHHHHHhhCC---CCCEEEEcCchH
Confidence 346889999988843321 123579999999999875322 221 1223445566666654322 136899999999
Q ss_pred HHHHHHHHHhcC----CC-----CeEEeeCCCCCCcHHHHhhc-CCEEEE---EeccCC--CCcccChHHHHHhhcCCcc
Q 014769 118 QAVEVILSVLAR----PG-----ANVLLPRPGWPYYEGIAQRK-QVEVRH---FDLLPE--RNWEVDLDAVEALADKNTA 182 (419)
Q Consensus 118 ~al~~~~~~l~~----~g-----d~vlv~~p~~~~~~~~~~~~-g~~~~~---~~~~~~--~~~~~~~~~l~~~~~~~~~ 182 (419)
+|++.+++.... .| .+|+....+|++....+... +..... .+..+. .-.-.|++.+++.+..+..
T Consensus 109 eA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~ 188 (408)
T PRK04612 109 EANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFNDVEALEAAMAGGDV 188 (408)
T ss_pred HHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCCceEcCCCCHHHHHHhhCCCCE
Confidence 999999987542 12 36899999999875444322 211100 111110 0001367888888876678
Q ss_pred EEEEeCCCCccccCCC--HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 183 AMVIINPGNPCGNVFT--YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 183 ~v~i~~p~nptG~~~~--~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
+++++.|.+++|-+++ .+++++|.++|+++|+++|+||+|.++...|..+. .. ..+....+.+|||.++ +|+|
T Consensus 189 aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~~a-~~---~~~~~pdi~t~~K~l~-~G~p 263 (408)
T PRK04612 189 AAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTLFA-HW---QEQVTPDIVTLAKALG-GGFP 263 (408)
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCchhh-hh---hcCCCCCEEEEcchhc-CCCc
Confidence 8899999887876544 77999999999999999999999998766553221 11 1122355668999975 7999
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----CC
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PC 335 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~ 335 (419)
+|++++++ ++++.+.... ..+++.+++.+.++.+.|+...+ ++..++++++.+++.+.|+++ +-
T Consensus 264 iga~~~~~--------~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~ 332 (408)
T PRK04612 264 IGAMLAGP--------KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGV 332 (408)
T ss_pred eEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999865 4666665432 33566788899888888876332 234455566666666665543 21
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
+. . ...-|+++.+.+.... ......+...+ .++||++.|.. .+.+|+.+ ..+++++++++++|++++.
T Consensus 333 i~-~-vrg~Gl~~~i~~~~~~---~~~a~~i~~~l-~~~Gvlv~~~g----~~~lRl~Ppl~it~eeid~~l~~l~~~l~ 402 (408)
T PRK04612 333 FA-Q-VRGRGLMLGAVLAPAH---AGQAGAILDLA-AEHGLLLLQAG----PDVLRFVPALNLTDAELADGLARLRLALA 402 (408)
T ss_pred ee-e-eeccceEEEEEecCch---hhHHHHHHHHH-HHCCeEEeeCC----CCEEEEcCCccCCHHHHHHHHHHHHHHHH
Confidence 22 1 2233556666653210 01134455444 67899997742 47899997 4689999999999999999
Q ss_pred HHhccC
Q 014769 414 RHTKKH 419 (419)
Q Consensus 414 ~~~~~~ 419 (419)
++.+++
T Consensus 403 ~~~~~~ 408 (408)
T PRK04612 403 DYVAQR 408 (408)
T ss_pred HHhhcC
Confidence 987764
No 221
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.92 E-value=1.1e-22 Score=189.62 Aligned_cols=291 Identities=18% Similarity=0.175 Sum_probs=194.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEE
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVR 156 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~ 156 (419)
+.+|+. +...+|+++++++. +.+++++++|+++|+..++. ++++||+|+++.+.|.+....+.......
T Consensus 48 Y~R~~~-p~~~~le~~lA~le--------g~~~~v~~~sG~aAi~~~l~-~l~~GD~VI~~~~~yg~~~~~~~~~~~~~- 116 (364)
T PRK07269 48 YTRTKN-PTRAKLEETLAAIE--------SADYALATSSGMSAIVLAFS-VFPVGSKVVAVRDLYGGSFRWFNQQEKEG- 116 (364)
T ss_pred eeCCCC-ccHHHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHH-HhCCCCEEEEecCCcCchHHHHHHHHhcC-
Confidence 445665 46789999999997 35799999999999999995 56899999999999976544333221100
Q ss_pred EEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769 157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (419)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 236 (419)
.+.+ .+..|++.+++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|....+. .++
T Consensus 117 ~~~~----~~~~d~~~l~~~i~~~TklV~lesP~NPtg~~~d---i~~I~~la~~~gi~vvvD~t~~~~~~~----~pl- 184 (364)
T PRK07269 117 RFHF----TYANTEEELIAAIEEDTDIVYIETPTNPLMVEFD---IEKVAKLAHAKGAKVIVDNTFYSPIYQ----RPI- 184 (364)
T ss_pred cEEE----EecCCHHHHHHhcCcCceEEEEECCCCCCCeeeC---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-
Confidence 0111 1235889999999889999999999999999987 999999999999999999997643221 122
Q ss_pred ccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHH
Q 014769 237 LFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCK 314 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~ 314 (419)
..+.+ +++.|++|.++.+| .=.|+++++++ ++.++++..... ....++...+.+...|+. +..
T Consensus 185 ~~gaD---ivv~S~tK~l~g~~d~~gG~v~~~~~-------~l~~~~~~~~~~~G~~~s~~~a~l~~~~L~t-----L~~ 249 (364)
T PRK07269 185 ELGAD---IVLHSATKYLSGHNDVLAGVVVTNDL-------ELYEKLFYNLNTTGAVLSPFDSYLLMRGLKT-----LSL 249 (364)
T ss_pred hhCCc---EEEecCceeccCCCcccceEEEeCcH-------HHHHHHHHHHHHhCCCCCHHHHHHHHcCCCc-----HHH
Confidence 22333 88999999976544 23577776542 466666644432 334455555444444433 777
Q ss_pred HHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHH---------HHhcCeEeecCCCC
Q 014769 315 LIDTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKL---------AKEESVIVTPGIYV 384 (419)
Q Consensus 315 ~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~l---------l~~~gv~v~~g~~~ 384 (419)
+.++.+++...+.+.|+++|.+..+. ++.+|++.+. +... .....|++.+ .....+.+.|+..+
T Consensus 250 r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~-~~~~-----~~~~~f~~~l~~~~~~~slG~~~sl~~~p~~~~ 323 (364)
T PRK07269 250 RMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFK-VADE-----TRIPHILNSLKVFTFAESLGGVESLITYPTTQT 323 (364)
T ss_pred HHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEE-ECCH-----HHHHHHHHhCCcceEccCCCCcCeEeeCCcccc
Confidence 77788889999999999888765454 4556665544 4310 0122333322 11234445554432
Q ss_pred CC-------------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 385 GL-------------KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 385 ~~-------------~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.. ++.+|+|++.+ +.+.+++.|++++.
T Consensus 324 ~~~~~~~~r~~~Gi~~~liRlsvGlE--~~~dli~dl~~al~ 363 (364)
T PRK07269 324 HADIPAEVRHSYGLTDDLLRLSIGIE--DARDLIADLKQALE 363 (364)
T ss_pred cccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHhc
Confidence 11 46899999974 56667777776653
No 222
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.92 E-value=6.6e-22 Score=188.04 Aligned_cols=227 Identities=15% Similarity=0.163 Sum_probs=160.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~~ 160 (419)
-...|++.++++. +.+..++++|+++|+..++..++++||+|+++.+.|.+. ...+...|++++.++.
T Consensus 65 ~~~~Le~~lA~le--------g~~~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~ 136 (431)
T PRK08248 65 TTDVFEKRIAALE--------GGIGALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDP 136 (431)
T ss_pred hHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECC
Confidence 4578899999987 246888999999999999999999999999999999753 3445678988888864
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.. +....++ .++
T Consensus 137 -------~d~e~l~~ai~~~tklV~l~sp~NPtG~v~d---i~~I~~la~~~gi~vIvD~t~a~----~~~~~pl-~~g- 200 (431)
T PRK08248 137 -------SDPENFEAAITDKTKALFAETIGNPKGDVLD---IEAVAAIAHEHGIPLIVDNTFAS----PYLLRPI-EHG- 200 (431)
T ss_pred -------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEeCCCCc----cccCChh-HcC-
Confidence 3788999999888999999999999999999 78999999999999999999863 1112222 233
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc-----------h--------------hhH-HHHHHhhh-ccccCCc
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-----------K--------------SGI-IDSIKDCL-SIYSDIP 293 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------~--------------~~~-~~~l~~~~-~~~~~~~ 293 (419)
..+++.|++|.++.+|.++|++++.+.+..+. + ... ........ ......+
T Consensus 201 --aDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~ 278 (431)
T PRK08248 201 --ADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS 278 (431)
T ss_pred --CCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCC
Confidence 34888999999999999999988754321100 0 000 01111111 2222333
Q ss_pred hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 294 TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 294 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
+...+.+..-| +-+..+.++..++...+.+.|+++|.+..+..|
T Consensus 279 p~~a~l~~rgl-----~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 322 (431)
T PRK08248 279 PFNSFLLLQGL-----ETLHLRMERHSENALAVAKFLEEHEAVEWVSYP 322 (431)
T ss_pred HHHHHHHhcCc-----CcHHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 33333322222 235566677788888999999988776544333
No 223
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.92 E-value=3.2e-22 Score=188.01 Aligned_cols=282 Identities=19% Similarity=0.169 Sum_probs=190.8
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEecc
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLL 161 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~ 161 (419)
..+|++.+++++ + .+++++++++++++..++. ++++||+|+++++.|.+... .+...|+++..++.
T Consensus 49 ~~~le~~la~l~------g--~~~~l~~~sG~~al~~~l~-ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~- 118 (378)
T TIGR01329 49 RTALESLLAKLD------K--ADRAFAFSSGMAALDVITR-LLNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDT- 118 (378)
T ss_pred HHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHH-HhCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCC-
Confidence 457777777765 2 2567777777889998776 67899999999999987644 34557999888764
Q ss_pred CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
.|++.+++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|.... ...++ .++.
T Consensus 119 ------~d~~~le~~i~~~tklv~le~psnptg~v~d---l~~I~~la~~~g~~vivD~a~~~~~----~~~~l-~~g~- 183 (378)
T TIGR01329 119 ------TDLDKVKAALGPKTKLVLLESPTNPLQKIVD---IRKISEMAHAQNALVVVDNTMMSPL----LCNPL-ELGA- 183 (378)
T ss_pred ------CCHHHHHHhcCcCceEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChh-hcCC-
Confidence 2788999999888999999999999999998 9999999999999999999985422 12222 2233
Q ss_pred CcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 242 VPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
.+++.|++|.++.+ +...|+++++++ .+.++++.... .....++...+.+...+ +.+..+.++.
T Consensus 184 --Di~v~S~tK~l~G~~~~~~G~v~~~~~-------~~~~~~~~~~~~~G~~~~~~~a~l~~~~l-----~tl~~R~e~~ 249 (378)
T TIGR01329 184 --DIVYHSATKFLAGHSDVMAGVLAVKGE-------EIAKKVYFLQNSTGSGLAPFDCWLLLRGI-----KTLAIRIEKQ 249 (378)
T ss_pred --cEEEEecceeccCCccceeEEEEeCcH-------HHHHHHHHHHHhcCCcCCHHHHHHHHccC-----CCHHHHHHHH
Confidence 38899999987654 478899988552 35555655443 22333443332222222 3355666666
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769 320 RESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 320 ~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
.++...+.+.|+++|.+..+..| ..|..+.+.+.. .....+|++.| +..++.++-|..
T Consensus 250 ~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~-----~~~~~~~~~~L-~~~~i~~s~G~~ 323 (378)
T TIGR01329 250 QENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGS-----VALSKRLVEAT-KLFSITVSFGSV 323 (378)
T ss_pred HHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECC-----HHHHHHHHHhC-cCcccccCCCCC
Confidence 77777777777766544222222 122344445531 11255777776 777887777764
Q ss_pred CCC-----------------------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 384 VGL-----------------------KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 384 ~~~-----------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
... ++.+|+|++.+ +.+.+++.|++++.+
T Consensus 324 ~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE--~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 324 NSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIE--DVDDLISDLDIAFVT 375 (378)
T ss_pred CceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHHHh
Confidence 321 35899999974 566777777777764
No 224
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=4.6e-22 Score=187.52 Aligned_cols=228 Identities=17% Similarity=0.163 Sum_probs=161.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~ 160 (419)
-...|++.++++. .....+.++++++|+..++.+++++||+|+++.++|.+.... +...|+++.++..
T Consensus 62 tv~~lE~~la~le--------g~~~av~~~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~ 133 (432)
T PRK06702 62 TLAAFEQKLAELE--------GGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNP 133 (432)
T ss_pred HHHHHHHHHHHHh--------CCCcEEEECCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECC
Confidence 4678999999987 235688899999999999999999999999999999865554 6778999888753
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.+|++.+++++++++++|++.+|+||++.+.+ +++|+++|+++|+++|+|++|..-. ...+ ...+.
T Consensus 134 ------~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~v~D---i~~I~~iA~~~gi~livD~T~~tP~----~~~p-l~~GA 199 (432)
T PRK06702 134 ------NLTADEIVALANDKTKLVYAESLGNPAMNVLN---FKEFSDAAKELEVPFIVDNTLATPY----LCQA-FEHGA 199 (432)
T ss_pred ------CCCHHHHHHhCCcCCeEEEEEcCCCccccccC---HHHHHHHHHHcCCEEEEECCCCchh----hCCh-hhcCC
Confidence 36889999999999999999999999999999 9999999999999999999985311 0111 12333
Q ss_pred CCcEEEEecCCC-----cCCCCCcee-----EEEEeeCCCCccch--------------hhHHHHHH--hhhccccCCch
Q 014769 241 IVPVITLGSISK-----RWLVPGWRF-----GWLVTNDPNGIFQK--------------SGIIDSIK--DCLSIYSDIPT 294 (419)
Q Consensus 241 ~~~~i~~~s~sK-----~~~~~G~r~-----G~~~~~~~~~~~~~--------------~~~~~~l~--~~~~~~~~~~~ 294 (419)
+ |++.|+|| ...++|.++ +|..++....+..+ +++....+ ....+....++
T Consensus 200 D---Ivv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp 276 (432)
T PRK06702 200 N---IIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSP 276 (432)
T ss_pred C---EEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhccchhhHHHHHHHHHHHHccCCCCH
Confidence 3 99999999 444555554 44443221111000 01111111 22233456666
Q ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
...+.+...|+. +..+.++..++...+.+.|+++|.+..+..|
T Consensus 277 ~~a~l~~rgL~T-----l~lR~~r~~~Na~~la~~L~~~p~V~~V~yP 319 (432)
T PRK06702 277 FNAYISNIGLET-----LHLRMERHSENALAVAKWLADHERIEWVNYP 319 (432)
T ss_pred HHHHHHHhccCc-----HHHHHHHHHHHHHHHHHHHHhCCCcceEECC
Confidence 666666655554 5566666678889999999987765534333
No 225
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.91 E-value=1.7e-21 Score=182.85 Aligned_cols=309 Identities=19% Similarity=0.272 Sum_probs=198.4
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP 139 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p 139 (419)
.++-.+++.+.+..+.. ++. ..+++.+.+++.+.. +.+++++|+|+++++..++.++ .+|||+|+++++
T Consensus 10 ~~~e~~a~~~~~~~~~~--~~~----g~~~~~~e~~la~~~----g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~ 79 (376)
T TIGR02379 10 TGQELEYIAEAISEGKL--SGD----GPFSRRCETWLENRT----GTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSY 79 (376)
T ss_pred CHHHHHHHHHHHHcCCc--cCC----cHHHHHHHHHHHHHh----CCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCC
Confidence 45557888888876543 211 234555555554432 3468999999999999999987 789999999999
Q ss_pred CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
+|......+...|++++.++++++ ++.+|++.+++++++++++|+ |+||+|...+ +++|.++|+++|+++|+|
T Consensus 80 t~~~~~~~~~~~G~~~v~vd~d~~-~~~~d~~~le~~i~~~tk~Ii---p~~~~G~~~d---~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 80 TFVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIESAITHRTKAIV---PVHYAGVACD---MDTIMALANKHQLFVIED 152 (376)
T ss_pred CcHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCCCCccC---HHHHHHHHHHCCCEEEEE
Confidence 999988888889999999998753 478999999999988888775 6678999988 889999999999999999
Q ss_pred ccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-------
Q 014769 220 EVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY------- 289 (419)
Q Consensus 220 e~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~------- 289 (419)
++|+.+. +.+... ..++. +.+.||+ |.+ .+|.+.|+++++++ ++.++++...+..
T Consensus 153 aa~~~g~~~~~~~~---g~~~~----~~~fSf~~~K~l-~~g~~gG~v~~~~~-------~~~~~~~~~~~~g~~~~~~~ 217 (376)
T TIGR02379 153 AAQGVMSTYKGRAL---GSIGH----LGTFSFHETKNY-TSGGEGGALLINDQ-------AFIERAEIIREKGTNRSQFF 217 (376)
T ss_pred CccccCCccCCccc---CCCCC----EEEEeCCCCCcC-cccCCceEEEECCH-------HHHHHHHHHHHhCCCCcccc
Confidence 9999764 444322 22221 3333443 663 56778899988753 4666666543311
Q ss_pred ---------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCc---e-EE
Q 014769 290 ---------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--C-ISCPNKPEG---S-MV 347 (419)
Q Consensus 290 ---------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~---g-~~ 347 (419)
+..+. .|+++. +.+ -+.+++..++-++..+...+.|..++ + ......|.+ . ++
T Consensus 218 ~~~~~~~~~~~~g~n~~~~~-~~Aa~g--~~q--L~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 292 (376)
T TIGR02379 218 RGEVDKYTWRDIGSSYLPSE-LQAAYL--WAQ--LEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHM 292 (376)
T ss_pred ccCCCcceeeeecccCCccH-HHHHHH--HHH--HHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEE
Confidence 01111 122221 111 13345544455555555566665542 1 121111211 1 23
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC----------CCC------------CCeEEEEe--ecCHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY----------VGL------------KNWLRIAF--CAEPSALKD 403 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~----------~~~------------~~~~Ris~--~~~~~~l~~ 403 (419)
+++.++.. .+..++...| +++||.+.+... +.. ...+.|.+ ..++++++.
T Consensus 293 ~~i~~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~~~~l~~~~~~~ 366 (376)
T TIGR02379 293 FYIKLKDE-----DDRNELIKYL-KEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPLYYGLSKEDQAR 366 (376)
T ss_pred EEEEECCc-----CCHHHHHHHH-HHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccCCCCCCHHHHHH
Confidence 34555531 1356666666 778998764321 100 23466665 358899999
Q ss_pred HHHHHHHHH
Q 014769 404 GLGRMKAFC 412 (419)
Q Consensus 404 ~l~~l~~~~ 412 (419)
.++.|++++
T Consensus 367 i~~~i~~~~ 375 (376)
T TIGR02379 367 VIQTICDYL 375 (376)
T ss_pred HHHHHHHHh
Confidence 999998764
No 226
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.91 E-value=6.2e-22 Score=188.62 Aligned_cols=165 Identities=21% Similarity=0.200 Sum_probs=133.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g 152 (419)
+.+|+.+ -..+|++.+++++ + .+..++++++++++..++.+++++||+|+++.+.|.+. ...+...|
T Consensus 51 ysr~~~p-~~~~le~~lA~l~------g--~~~~v~~~sG~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G 121 (418)
T TIGR01326 51 YSRLMNP-TTDVLEQRIAALE------G--GVAALAVASGQAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLG 121 (418)
T ss_pred eECCCCh-hHHHHHHHHHHHh------C--CCeEEEEccHHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcC
Confidence 3455543 4579999999987 2 35788999999999999999999999999999998653 34456788
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
++++.++. .|++.+++++++++++|++.+|+||||.+.+ +++|.++|+++|+++|+|++|+.... .
T Consensus 122 ~~v~~v~~-------~d~~~l~~~l~~~t~~V~le~p~NPtg~v~d---l~~I~~la~~~~i~livD~t~~~~~~----~ 187 (418)
T TIGR01326 122 IEVRFVDP-------DDPEEFEKAIDENTKAVFAETIGNPAINVPD---IEAIAEVAHAHGVPLIVDNTFATPYL----C 187 (418)
T ss_pred cEEEEECC-------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCchhhc----C
Confidence 88888763 1789999999888999999999999999998 88999999999999999999974321 1
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
.++ . .+..+++.|+||.++.+|.|+||++++.
T Consensus 188 ~~l-~---~g~Divv~S~sK~l~g~G~~lGg~v~~~ 219 (418)
T TIGR01326 188 RPI-D---HGADIVVHSATKYIGGHGTAIGGVIVDG 219 (418)
T ss_pred Cch-h---cCCeEEEECccccccCCccceEEEEEec
Confidence 111 1 2346899999999999999999999865
No 227
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.91 E-value=2.8e-22 Score=191.79 Aligned_cols=348 Identities=15% Similarity=0.094 Sum_probs=215.7
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|.+...-. ..+|.+.+++.+++.... ..|.+..+..+|.+.+++.+ + ..+.+++++|++
T Consensus 46 d~dG~~~lD~~~g~~~~~lG-h~~p~i~~a~~~~~~~~~-~~~~~~~~~~~la~~L~~~~------~-~~~~v~~~~sGs 116 (426)
T PRK00062 46 DVDGNEYIDYVGSWGPMILG-HAHPEVVEAVIEAAEKGL-SFGAPTELEVELAELVIELV------P-SIEMVRMVNSGT 116 (426)
T ss_pred eCCCCEEEEcccchhhhhcC-CCCHHHHHHHHHHHHhCC-cCCCCCHHHHHHHHHHHHhC------C-CCCEEEEecCHH
Confidence 34689999999986543211 367999999999998743 23444445556666666654 1 356899999999
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CCEEE-----EEeccC----CCCc---ccChHHHHHhhcC--C
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QVEVR-----HFDLLP----ERNW---EVDLDAVEALADK--N 180 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~-----~~~~~~----~~~~---~~~~~~l~~~~~~--~ 180 (419)
+|++.+++.... ..++|+..+++|+++...+... +.... ..+..+ .... ..|++.+++.+.. +
T Consensus 117 eA~e~Aik~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~ 196 (426)
T PRK00062 117 EATMSAIRLARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGD 196 (426)
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCC
Confidence 999999998654 2588999999999875333221 10000 000000 0000 1267888877742 2
Q ss_pred ccEEEEeCC-CCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINP-GNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
....+++.| ...+|.+.+ .+++++|.++|++||+++|+||+|.++.+++.. ....++..+. +.++||.++ .|
T Consensus 197 ~~aaiivEpv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~--~~~~~~~~pD---i~~~gK~l~-~G 270 (426)
T PRK00062 197 EIAAVIVEPVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGG--AQGYYGVTPD---LTTLGKIIG-GG 270 (426)
T ss_pred cEEEEEEeCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCcc--HHHHhCCCcc---hHhhhhHhh-CC
Confidence 334445554 445787765 899999999999999999999999987443211 1111221111 348899975 78
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhh---h-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC---L-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~---~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
+++|++++++ ++++.++.. . ..+++.+++.+.++.+.|+.... +.+++.++.....++.+.+.+++.
T Consensus 271 ~p~ga~~~~~--------~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 342 (426)
T PRK00062 271 LPVGAFGGRR--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAAKKA 342 (426)
T ss_pred CcceeeeEHH--------HHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999998865 577777522 1 22456788888888888875332 234444444444444444444444
Q ss_pred CCCCCCCCCCceEEEEeecCcccccC-----CCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLED-----IND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL 405 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l 405 (419)
++..-..+.+. ++-+.+....... ..+ ...+...+ .++||.+.|.. .+.+++++..+++++++++
T Consensus 343 -~~~~~vrg~G~-~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l-~~~Gv~v~~~~----~~~~~~~~~~t~~ei~~~~ 415 (426)
T PRK00062 343 -GIPLTVNRVGS-MFGLFFTDEPVTNYADAKKSDTERFARFFHAM-LDEGVYLAPSQ----FEAGFVSAAHTDEDIEKTL 415 (426)
T ss_pred -CCceEEEEecc-eEEEEEecCCCcchhhhccccHHHHHHHHHHH-HHCCeEeecCC----cCceeeeccCCHHHHHHHH
Confidence 33211123444 4444443211000 001 13555555 56799998753 2356788888999999999
Q ss_pred HHHHHHHHHH
Q 014769 406 GRMKAFCQRH 415 (419)
Q Consensus 406 ~~l~~~~~~~ 415 (419)
+.+++++.++
T Consensus 416 ~~l~~~l~~~ 425 (426)
T PRK00062 416 EAARKAFAAL 425 (426)
T ss_pred HHHHHHHHhh
Confidence 9999999765
No 228
>PLN02624 ornithine-delta-aminotransferase
Probab=99.91 E-value=1.1e-21 Score=189.36 Aligned_cols=345 Identities=15% Similarity=0.100 Sum_probs=211.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+|+.++||..|.-+.. .-.-+|.+.+++.+++....... +.......++.+.++++. + .+.++++++++
T Consensus 72 ~dG~~ylD~~sg~~~~~-~Gh~~p~v~~ai~~ql~~~~~~~~~~~~~~~~~la~~L~~~~----~----~~~~~f~~SGs 142 (474)
T PLN02624 72 PEGKKYLDFLSAYSAVN-QGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEFAEYLTSMF----G----YDMVLPMNTGA 142 (474)
T ss_pred CCCCEEEEcccchhccc-CCCCCHHHHHHHHHHHHhcCCcccccCCHHHHHHHHHHHhhc----C----CCeEEEeCChH
Confidence 35788999988743321 12348999999999987643211 111223345555555543 2 36899999999
Q ss_pred HHHHHHHHHhcC--------C-C-CeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCC--cccChHHHHHhhcC--
Q 014769 118 QAVEVILSVLAR--------P-G-ANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERN--WEVDLDAVEALADK-- 179 (419)
Q Consensus 118 ~al~~~~~~l~~--------~-g-d~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~~~-- 179 (419)
+|++.+++.... + + ..|+....+|++....+........ +.+..+.-. .-.|++.+++.++.
T Consensus 143 eA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~ 222 (474)
T PLN02624 143 EGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDG 222 (474)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCC
Confidence 999999986542 1 2 2577788888876433332221110 001000000 00167888887752
Q ss_pred -CccEEEEeCCCCccccCCCHH-HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC
Q 014769 180 -NTAAMVIINPGNPCGNVFTYH-HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP 257 (419)
Q Consensus 180 -~~~~v~i~~p~nptG~~~~~~-~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 257 (419)
+..++++..++|++|.+++.+ ++++|.++|++||+++|+||+|.++...|.... ....+....++ ++||.++.+
T Consensus 223 ~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a-~~~~~i~pDiv---~lsK~lggG 298 (474)
T PLN02624 223 DRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLA-CDWEEVRPDVV---ILGKALGGG 298 (474)
T ss_pred CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhh-HHhcCCCCCEE---EecccccCC
Confidence 345566667799999987655 699999999999999999999998765554221 11122222233 468999877
Q ss_pred CceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----
Q 014769 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE---- 332 (419)
Q Consensus 258 G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~---- 332 (419)
++++|++++++ ++++.+.... ..+++.+++.+.++.+.|+...... ..+++.++.+.+++.|++
T Consensus 299 ~~pigav~~~~--------~i~~~~~~~~~~~T~~g~pl~~aaa~aaLe~l~~~~---l~~~~~~~~~~l~~~L~~l~~~ 367 (474)
T PLN02624 299 VIPVSAVLADK--------DVMLCIKPGEHGSTFGGNPLASAVAMAALQVVQDEK---LAERSAKLGQELRDQLQKIQKQ 367 (474)
T ss_pred CCcceeeeecH--------HHHhHhccCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHHHHHHHHHh
Confidence 79999999865 4666554332 2345678888888888886532222 222333444444444433
Q ss_pred CCC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769 333 IPC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK 409 (419)
Q Consensus 333 ~~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~ 409 (419)
++. +..+ .+. |.+..+.++.... +.....++...| .++||.+.|+. .+++||++ ..++++|++++++|+
T Consensus 368 ~~~~i~~v-rg~-G~~~~i~l~~~~~-~~~~a~~~~~~L-~e~GV~v~p~~----~~~lR~~p~l~~t~e~id~~l~~L~ 439 (474)
T PLN02624 368 FPKLIKEV-RGR-GLLNAVVLNSPKL-GPVSAYDVCLKL-KERGLLAKPTH----DTIIRLAPPLSISEDELQECSKALS 439 (474)
T ss_pred CCCceEEE-Eee-EEEEEEEecCCCc-ChHHHHHHHHHH-HhCCeEEecCC----CCEEEEECCccCCHHHHHHHHHHHH
Confidence 332 2212 334 4444455542110 001245666665 67899998863 57899997 578999999999999
Q ss_pred HHHHHH
Q 014769 410 AFCQRH 415 (419)
Q Consensus 410 ~~~~~~ 415 (419)
+++++-
T Consensus 440 ~~l~~~ 445 (474)
T PLN02624 440 DVLEHD 445 (474)
T ss_pred HHHHHH
Confidence 998754
No 229
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.91 E-value=8.2e-22 Score=187.25 Aligned_cols=293 Identities=17% Similarity=0.165 Sum_probs=187.1
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh----cCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~ 160 (419)
...+|++.++++. + .+..++++++++|+..++.++.++||+|+++.+.|.+....+.. .|+++.+++.
T Consensus 59 t~~~Le~~lA~l~------g--~~~~l~~ssG~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~ 130 (425)
T PRK06084 59 TNDVLEQRVAALE------G--GVGALAVASGMAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAH 130 (425)
T ss_pred hHHHHHHHHHHHh------C--CCceeEehhHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECC
Confidence 4578999999986 2 34667888889999999999999999999999999864443332 3555555432
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+.... ..++ .++.
T Consensus 131 -------~d~e~le~ai~~~tklV~lesp~NPtG~v~d---l~~I~~la~~~~i~vVvD~a~a~~~~----~~p~-~~ga 195 (425)
T PRK06084 131 -------DDIAALEALIDERTKAVFCESIGNPAGNIID---IQALADAAHRHGVPLIVDNTVATPVL----CRPF-EHGA 195 (425)
T ss_pred -------CCHHHHHHHhccCCcEEEEeCCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CChh-hcCC
Confidence 3789999999888999999999999999999 89999999999999999999985322 1122 2233
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch------------h--------------hHHHHHH-h-hhccccCC
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK------------S--------------GIIDSIK-D-CLSIYSDI 292 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~------------~--------------~~~~~l~-~-~~~~~~~~ 292 (419)
.+++.|++|.++.+|.++|.+++.+....... + ......+ . ........
T Consensus 196 ---Divv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l 272 (425)
T PRK06084 196 ---DIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAAL 272 (425)
T ss_pred ---CEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhhhhcchHHHHHHHHHHHHHhcCCCC
Confidence 38899999999999999988877532100000 0 0000000 0 11222333
Q ss_pred chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----------------C-ceEEEEeecCcc
Q 014769 293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP----------------E-GSMVTMVKLNPW 355 (419)
Q Consensus 293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----------------~-~g~~~~~~~~~~ 355 (419)
++...+.+..-| +-+..+.++..++...+.+.|+++|.+..+..| . .|-.+.+.+...
T Consensus 273 ~~~~a~l~lrgl-----~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~~gg~~s~~~~~~ 347 (425)
T PRK06084 273 SPFNAFLILQGL-----ETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHELARRYMGGKPASILSFGIKGG 347 (425)
T ss_pred CHHHHHHHHcCc-----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHHHHHHhCCCCcceEEEEEecCC
Confidence 444333332222 336666677788888899999887765534333 2 233444555421
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
.....+|++.| +-..+.++-|.... . ++.+|||++.+ +.+.+++.|.+++
T Consensus 348 ----~~~~~~f~~~l-~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE--d~~dLi~dl~~Al 420 (425)
T PRK06084 348 ----QAAGARFIDAL-KLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRLSIGIE--HIDDIIADLAQAL 420 (425)
T ss_pred ----HHHHHHHHHhC-CcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHHH
Confidence 01123444443 22222222222110 0 35899999974 5667777777777
Q ss_pred HHH
Q 014769 413 QRH 415 (419)
Q Consensus 413 ~~~ 415 (419)
...
T Consensus 421 ~~~ 423 (425)
T PRK06084 421 DAS 423 (425)
T ss_pred Hhh
Confidence 653
No 230
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.91 E-value=4.8e-21 Score=183.18 Aligned_cols=354 Identities=14% Similarity=0.094 Sum_probs=216.3
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|.-... .-.-+|.+.+++.+++..... +.......+.+..+++.+.+..+ ...+.++++++
T Consensus 35 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~s 109 (443)
T PRK08360 35 VWDIEGNEYIDFLSDAAVQN-VGHNNPRVVKAIKEQTDKLIH--YTPIYGFPVEPLLLAEKLIEIAP--GDNPKVSFGLS 109 (443)
T ss_pred EEECCCCEEEEccccHhhcc-cCCCCHHHHHHHHHHHHhccC--ccccccCcHHHHHHHHHHHHhCC--CCCCEEEEcCC
Confidence 33456899999988843321 123589999999999876422 22211223445556666554332 22368999999
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhh-cCC------------EEEEEeccCCC--Ccc--------cCh
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQR-KQV------------EVRHFDLLPER--NWE--------VDL 170 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~-~g~------------~~~~~~~~~~~--~~~--------~~~ 170 (419)
+++|++.+++.... .| ..|+....+|++....+.. .+. .+.+++..... .+. .++
T Consensus 110 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (443)
T PRK08360 110 GSDANDGAIKFARAYTKRRKILSYLRSYYGSTYGAMSLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECV 189 (443)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEEeCCcCCcCHHHHHhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHH
Confidence 99999999987643 23 6788888888876432222 111 11222211100 000 123
Q ss_pred HHHHHhhcC----CccEEEEeCC-CCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 171 DAVEALADK----NTAAMVIINP-GNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 171 ~~l~~~~~~----~~~~v~i~~p-~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
+.+++.+.. +..+.++..| +||+|.+++ .++++++.++|+++|+++|+||+|.++.+.|..+ ....++..+++
T Consensus 190 ~~~~~~l~~~~~~~~iAAvi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~-a~~~~~~~pDi 268 (443)
T PRK08360 190 EYIKEKFEGEVYAEGVAALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWF-AIEHFGVEPDI 268 (443)
T ss_pred HHHHHHHHhccCCCCeEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccch-hhhhcCCCCCE
Confidence 445555531 2334455566 699998776 6689999999999999999999999887666432 22222323333
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
+ ++||.++ +|+|+||+++++ ++++.+.... ..+++.+++.+.++.++|+....+ ...++++++.
T Consensus 269 i---tlsK~l~-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g 333 (443)
T PRK08360 269 I---TLGKPLG-GGLPISATIGRA--------EIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEK---NLLKRAEKLG 333 (443)
T ss_pred E---Eeccccc-CCceeEEEEEcH--------HHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHc---CHHHHHHHHH
Confidence 3 6799976 899999999875 5777775442 335667888888888888763322 2334445555
Q ss_pred HHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769 324 EICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL---LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-- 394 (419)
Q Consensus 324 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-- 394 (419)
+++++.|++ .|.+. . ...-|.++-+.+.... .........+...+ .++||.+.+.. .+.+|+++
T Consensus 334 ~~l~~~L~~l~~~~~~v~-~-vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~----~~~lr~~P~l 406 (443)
T PRK08360 334 NYTKKRLEEMKKKHELIG-D-VRGIGLMIGVDLVKDRETKERAYEEAAKVVWRA-WELGLIVTFFS----GNVLRIQPPL 406 (443)
T ss_pred HHHHHHHHHHHHhCCCee-e-eeccceEEEEEEecCCcccCccHHHHHHHHHHH-HHCCeEEeecC----CCEEEEeCCC
Confidence 555555443 33222 1 2234556566553210 00000123455555 66899986532 47799977
Q ss_pred ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 395 CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
..++++++++++++.++++...+
T Consensus 407 ~~t~~~id~~~~~l~~~l~~~~~ 429 (443)
T PRK08360 407 TIEKEVLDEGLDILEEAIEDVEE 429 (443)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHh
Confidence 57999999999999999987643
No 231
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.91 E-value=1.4e-21 Score=182.87 Aligned_cols=289 Identities=16% Similarity=0.131 Sum_probs=191.7
Q ss_pred CCCCCCCC---HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----Hhhc
Q 014769 79 CYATNSGI---PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRK 151 (419)
Q Consensus 79 ~Y~~~~g~---~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~ 151 (419)
.|+. .|. ..|++.++++. ..+++++++|+++|+..++.+++++||.|++++|.|.+.... +...
T Consensus 43 ~Y~r-~gnPt~~~lE~~lA~l~--------g~~~~~~~~sG~~Ai~~al~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~ 113 (377)
T TIGR01324 43 TYGR-RGTLTHFALQDAMCELE--------GGAGCYLYPSGLAAVTNSILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRM 113 (377)
T ss_pred cccC-CCCccHHHHHHHHHHHh--------CCCcEEEECcHHHHHHHHHHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhc
Confidence 4653 344 69999999987 246899999999999999999999999999999999875433 3556
Q ss_pred CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769 152 QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231 (419)
Q Consensus 152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 231 (419)
|+++..++. . +.+.+++++++++++|++.+|+||+|.+.+ +++|+++|+++|+++|+|++|+.....
T Consensus 114 gi~v~~~d~--~-----~~e~l~~~i~~~tklV~lesp~Np~g~~~d---l~~I~~la~~~g~~livD~t~a~g~~~--- 180 (377)
T TIGR01324 114 GVDITYYDP--L-----IGEDIATLIQPNTKVLFLEAPSSITFEIQD---IPAIAKAARNPGIVIMIDNTWAAGLLF--- 180 (377)
T ss_pred CcEEEEECC--C-----CHHHHHHhcCCCceEEEEECCCCCCCcHHH---HHHHHHHHHHcCCEEEEECCCcccccc---
Confidence 777766542 1 227888888889999999999999988876 999999999999999999999863321
Q ss_pred CCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch
Q 014769 232 YTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
.++ .++. .++++|++|.++.+| ...|++++++ +..+.++... ......++...+.+...+
T Consensus 181 -~pl-~~ga---Divv~S~tK~l~G~~d~~gG~v~~~~--------~~~~~l~~~~~~~G~~l~p~~a~~~~rgl----- 242 (377)
T TIGR01324 181 -KPL-EHGV---DISIQAGTKYLVGHSDIMIGTVVANA--------RTWDQLREHSYLMGQMVDADDAYTTLRGL----- 242 (377)
T ss_pred -Ccc-ccCc---eEEEecCceeccCCCCceEEEEEeCH--------HHHHHHHHHHHHhCCCCCHHHHHHHHhhh-----
Confidence 122 2333 489999999976553 6788887754 3455555332 223334544433333333
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKE 373 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 373 (419)
+.+..+.++..++...+.+.|++.|.+..+..|. .|-.+.++++... ......|++.| +-
T Consensus 243 ~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~---~~~~~~~~~~l-~~ 318 (377)
T TIGR01324 243 RTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLT---QKQVHAFLDHL-QL 318 (377)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCC---HHHHHHHHHhC-Cc
Confidence 3355556777777778888888776654343342 2333445564210 01234555554 44
Q ss_pred cCeEeecCCCCC-------------------CCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 374 ESVIVTPGIYVG-------------------LKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 374 ~gv~v~~g~~~~-------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.++.++-|.... .++.+|+|++.+ +.+++++.|.+++.
T Consensus 319 ~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~~liR~svGlE--~~~dl~~dl~~al~ 375 (377)
T TIGR01324 319 FGLGYSWGGYESLALCNQPELGHRPNIKRNLEGPLIRVHIGLE--NVDDLKADLKAGFE 375 (377)
T ss_pred ceEeccCCCccceeecCCCCCCHHHHHhccCCCCEEEEEeCCC--CHHHHHHHHHHHHh
Confidence 444433332210 125799999874 45666666666664
No 232
>PRK05939 hypothetical protein; Provisional
Probab=99.91 E-value=1.8e-21 Score=183.51 Aligned_cols=225 Identities=16% Similarity=0.109 Sum_probs=155.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPE 163 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~ 163 (419)
..|++.++++. ..+..++++++++|+..++.+++++||+|+++++.|+... ..+...|+++..++.
T Consensus 50 ~~lE~~la~le--------g~~~~v~~ssG~~Ai~~~l~all~~Gd~Vv~~~~~y~~t~~~~~~l~~~G~~v~~v~~--- 118 (397)
T PRK05939 50 AALEAKITKME--------GGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQFLFGNTNSLFGTLRGLGVEVTMVDA--- 118 (397)
T ss_pred HHHHHHHHHHh--------CCCeEEEeCCHHHHHHHHHHHHcCCCCEEEECCCccccHHHHHHHHHhcCCEEEEECC---
Confidence 38999999986 2234566666799999999999999999999999997643 345667888888764
Q ss_pred CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243 (419)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 243 (419)
.|++++++++++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|.... ...+ ..+ +.
T Consensus 119 ----~d~e~l~~~l~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~t~a~~~----~~~~-~~~---ga 183 (397)
T PRK05939 119 ----TDVQNVAAAIRPNTRMVFVETIANPGTQVAD---LAGIGALCRERGLLYVVDNTMTSPW----LFRP-KDV---GA 183 (397)
T ss_pred ----CCHHHHHHhCCCCCeEEEEECCCCCCCCHHh---HHHHHHHHHHcCCEEEEECCccccc----ccCc-ccc---CC
Confidence 2789999999989999999999999999966 9999999999999999999986421 1111 112 24
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCCCCcc------ch--------hhHHHHHHhh--hccccCCchHHHHHHHHHHccc
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIF------QK--------SGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKT 307 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~------~~--------~~~~~~l~~~--~~~~~~~~~~~~~a~~~~l~~~ 307 (419)
.+++.|+||.++..|.++|++++.+..... .. ...+..++.. .......++...+.+..-+
T Consensus 184 Divv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl--- 260 (397)
T PRK05939 184 SLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGA--- 260 (397)
T ss_pred EEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCc---
Confidence 589999999999999999998874321000 00 0001122211 1222233433333322222
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
+-+..+.++..++...+.+.|+..|.+..+..|
T Consensus 261 --~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP 293 (397)
T PRK05939 261 --ETLALRVDRSCSNALALAQFLEAHPKVARVYYP 293 (397)
T ss_pred --CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 235555566667888899999887765434444
No 233
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.91 E-value=8.2e-21 Score=179.17 Aligned_cols=312 Identities=14% Similarity=0.108 Sum_probs=205.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCC
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPG 140 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~ 140 (419)
+.-.+++.+.+..+.. .+++ ...+|++++++++ +. +++++++|+++|+..++.++ .++||+|++++++
T Consensus 14 ~~e~~~~~~~l~~~~~-~~g~--~~~~le~~la~~~------g~--~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~ 82 (379)
T PRK11658 14 DEELAAVKEVLRSGWI-TTGP--KNQALEQAFCQLT------GN--QHAIAVSSATAGMHITLMALGIGPGDEVITPSLT 82 (379)
T ss_pred HHHHHHHHHHHHcCCc-cCCH--hHHHHHHHHHHHh------CC--CeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCc
Confidence 4557778888876543 2333 5789999999998 22 46888999999999999999 7899999999999
Q ss_pred CCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 141 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
|..+...+...|++++.++++++ ++.+|++.+++++++++++|+ |.|++|...+ +++|.++|+++|+++|+|+
T Consensus 83 ~~~~~~~~~~~G~~~v~vd~~~~-~~~~d~~~l~~~i~~~tkav~---~~~~~G~~~d---~~~i~~~a~~~gi~vi~D~ 155 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDRD-TLMVTPEAIEAAITPRTKAII---PVHYAGAPAD---LDAIRAIGERYGIPVIEDA 155 (379)
T ss_pred HHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcccCCeEEE---EeCCCCCcCC---HHHHHHHHHHcCCeEEEEC
Confidence 99998888999999999998643 467899999999988888776 5667999887 8899999999999999999
Q ss_pred ccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcccc---------
Q 014769 221 VYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS--------- 290 (419)
Q Consensus 221 ~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------- 290 (419)
+|+.. .+.+.. +... +. .+.||++...+++.+.|+++++++ ++.++++.......
T Consensus 156 a~a~g~~~~~~~---~g~~---g~--~~~Sf~~~K~l~~g~GG~v~~~~~-------~~~~~~~~~~~~G~~~~~~~~~~ 220 (379)
T PRK11658 156 AHAVGTYYKGRH---IGAR---GT--AIFSFHAIKNITCAEGGLVVTDDD-------ELADRLRSLKFHGLGVDAFDRQT 220 (379)
T ss_pred CCccCCeECCee---cCCC---CC--EEEeCCCCCcCcccCceEEEECCH-------HHHHHHHHHHHcCCCcchhhhhc
Confidence 99853 333321 1222 21 345666555567777898887642 45555554321110
Q ss_pred ------------CCc--hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEE-EEee
Q 014769 291 ------------DIP--TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMV-TMVK 351 (419)
Q Consensus 291 ------------~~~--~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~-~~~~ 351 (419)
+.+ .....|+..... .+.+++..++-++..+.+.+.|++++... +..|. ..++ ..+.
T Consensus 221 ~~~~~~~~~~~~G~n~~~~~l~AAl~~~q---l~~l~~~~~~r~~~a~~~~~~L~~~~~~~-~~~~~~~~~~~~~~~~~~ 296 (379)
T PRK11658 221 QGRAPQAEVLTPGYKYNLADINAAIALVQ---LAKLEALNARRREIAARYLQALADLPFQP-LSLPAWPHQHAWHLFIIR 296 (379)
T ss_pred ccCCCcceeeccccccCcCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhcCCCCcc-CcCCCCCCceeEEEEEEE
Confidence 000 011112211111 25577777777888888888888775432 21222 1222 2234
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCC-------C----C---C-------CCeEEEEe--ecCHHHHHHHHHHH
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIY-------V----G---L-------KNWLRIAF--CAEPSALKDGLGRM 408 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~----~---~-------~~~~Ris~--~~~~~~l~~~l~~l 408 (419)
++.... + .+..++...| +++||.+.+... | . . ...+.|.+ ..++++++..++.|
T Consensus 297 ~~~~~~-~-~~r~~~~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~~~~l~~~~~~~i~~~i 373 (379)
T PRK11658 297 VDEERC-G-ISRDALMEAL-KERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDADVDRVITAL 373 (379)
T ss_pred ECCccc-c-CCHHHHHHHH-HHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHH
Confidence 432100 1 1456777666 677987653210 0 0 0 23455555 35789999999999
Q ss_pred HHHHH
Q 014769 409 KAFCQ 413 (419)
Q Consensus 409 ~~~~~ 413 (419)
++++.
T Consensus 374 ~~~~~ 378 (379)
T PRK11658 374 QQIAG 378 (379)
T ss_pred HHHHh
Confidence 98763
No 234
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.91 E-value=2.6e-21 Score=184.55 Aligned_cols=334 Identities=15% Similarity=0.139 Sum_probs=213.5
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+|..++||..|..+.. .-..+|++.+++.++++..... ......-..++.+.+++++ + .+.++++++++
T Consensus 34 ~~g~~~lD~~s~~~~~~-~Gh~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~----~----~~~~~~~~SGs 104 (401)
T TIGR01885 34 VEGKRYLDFLSAYSAVN-QGHCHPKIVKALTEQAQKLTLSSRAFYNDVFGEFAEYVTKLF----G----YDKVLPMNTGA 104 (401)
T ss_pred CCCCEEEEcccCHhhcc-CCCCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHhhc----C----CCEEEEeCccH
Confidence 35888999988743311 1124799999999988653211 1001122345555555553 2 36899999999
Q ss_pred HHHHHHHHHhcC---------C-CCeEEeeCCCCCCc-HHHHhhcCC------------EEEEEeccCCCCcccChHHHH
Q 014769 118 QAVEVILSVLAR---------P-GANVLLPRPGWPYY-EGIAQRKQV------------EVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 118 ~al~~~~~~l~~---------~-gd~vlv~~p~~~~~-~~~~~~~g~------------~~~~~~~~~~~~~~~~~~~l~ 174 (419)
+|+..++..+.. + .+.|+....+|++. ...+...+. .+..++. .|++.++
T Consensus 105 ~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le 177 (401)
T TIGR01885 105 EAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAISMSTDPDSRTNFGPYVPGFKKIPY-------NNLEALE 177 (401)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHHhCcCCcccccccCCCCCCceEeCC-------CCHHHHH
Confidence 999999998532 2 36778888888764 222222221 1111111 2678888
Q ss_pred Hhhc---CCccEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769 175 ALAD---KNTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (419)
Q Consensus 175 ~~~~---~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 250 (419)
+.++ ++..++++..+++++|...+ .+++++|.++|++||+++|+||+|.++.+.|..+ .....+..+.++ ++
T Consensus 178 ~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~G~~~-~~~~~~~~~di~---~~ 253 (401)
T TIGR01885 178 EALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLL-CVDHENVKPDIV---LL 253 (401)
T ss_pred HHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HHhhcCCCCCEE---Ee
Confidence 7774 23445555556899999875 5579999999999999999999998776655432 121112122233 46
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
||.++..++|+|++++++ ++++.++.. ...+++.+++.+.++.++|+....+ ...+++++..+.+.+.
T Consensus 254 gK~l~~g~~~ig~v~~~~--------~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~~---~l~~~~~~~~~~~~~~ 322 (401)
T TIGR01885 254 GKALSGGVYPVSAVLADD--------DVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEEE---KLAENAEKLGEIFRDQ 322 (401)
T ss_pred eccccCCCCCcEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHH
Confidence 799877669999999865 577766542 2334566788888888888753322 2345666778888888
Q ss_pred hhcCCCCCCC--CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHH
Q 014769 330 VKEIPCISCP--NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGL 405 (419)
Q Consensus 330 l~~~~~~~~~--~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l 405 (419)
|++++ ..++ ..+. |.+..+.++.... ..+..++..+| .++||.+.|+. .+.+|+++ ..++++|++++
T Consensus 323 L~~l~-~~~~~~~~g~-g~~~~i~~~~~~~--~~~~~~l~~~l-~~~Gv~v~~~~----~~~lRi~p~l~~t~~~i~~~l 393 (401)
T TIGR01885 323 LKKLP-KPIITEVRGR-GLLNAIVIDESKT--GRTAWDLCLKL-KEKGLLAKPTH----GNIIRLAPPLVITEEQLDEGL 393 (401)
T ss_pred HHhcc-CCceeEEeec-CeeEEEEeccCcc--hhHHHHHHHHH-HhCCEEEEecC----CCEEEEeCCccCCHHHHHHHH
Confidence 88762 2211 1233 4444444543110 01345677777 56799998753 57899998 47899999999
Q ss_pred HHHHHHH
Q 014769 406 GRMKAFC 412 (419)
Q Consensus 406 ~~l~~~~ 412 (419)
++|++++
T Consensus 394 ~~l~~~l 400 (401)
T TIGR01885 394 EIIKKVI 400 (401)
T ss_pred HHHHHHh
Confidence 9999875
No 235
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.91 E-value=3.6e-21 Score=183.91 Aligned_cols=333 Identities=13% Similarity=0.086 Sum_probs=209.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---CC-CCCCCCCC---CHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KF-NCYATNSG---IPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~-~~Y~~~~g---~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++.|+.+..+ +.++.+.+++.+.+... .. ..+....+ ..+.++.+ +++ +.++++|++|+
T Consensus 26 ~~~iyld~~a~g-----~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~------g~~~~~v~~~~ 93 (406)
T TIGR01814 26 NAVIYLDGNSLG-----LMPKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLLKL-RLV------GAKEDEVVVMN 93 (406)
T ss_pred CCcEEecCCCcC-----cCcHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhccc-ccc------CCCCCcEEEeC
Confidence 567999977632 34778888887665421 10 11110011 11222223 343 56789999999
Q ss_pred cHHHHHHHHHHHhcCCC---CeEEeeCCCCCCcHH----HHhhcCCEEE--EEeccCCCCcccChHHHHHhh---cCCcc
Q 014769 115 GCKQAVEVILSVLARPG---ANVLLPRPGWPYYEG----IAQRKQVEVR--HFDLLPERNWEVDLDAVEALA---DKNTA 182 (419)
Q Consensus 115 g~~~al~~~~~~l~~~g---d~vlv~~p~~~~~~~----~~~~~g~~~~--~~~~~~~~~~~~~~~~l~~~~---~~~~~ 182 (419)
|+|++++.++.++.+++ +.|++.+..|+.... .++..|++++ ...+....++.++++.+++.+ .++++
T Consensus 94 ~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~t~ 173 (406)
T TIGR01814 94 TLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEPREEETLRLEDILDTIEKNGDDIA 173 (406)
T ss_pred CchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEeccCCCCccCHHHHHHHHHhcCCCeE
Confidence 99999999999876654 367888889987332 3455677761 122222334567888888776 36788
Q ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCcee
Q 014769 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRF 261 (419)
Q Consensus 183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~ 261 (419)
+|++++++|.||.++| +++|.++|+++|+++++|++++. |..+..+..++. .+++.|.+|+++ .||
T Consensus 174 lv~~~~v~~~tG~~~~---~~~i~~~~~~~g~~~~vD~aq~~----G~~~id~~~~gv---D~~~~s~hK~l~g~pG--- 240 (406)
T TIGR01814 174 VILLSGVQYYTGQLFD---MAAITRAAHAKGALVGFDLAHAV----GNVPLDLHDWGV---DFACWCTYKYLNAGPG--- 240 (406)
T ss_pred EEEEeccccccceecC---HHHHHHHHHHcCCEEEEEccccc----CCcccccccCCC---CEEEEcCccccCCCCC---
Confidence 9999999999999999 99999999999999999999997 322233333333 388889999853 344
Q ss_pred EEEEeeCCCCccchhhHHHH--------H--------HhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769 262 GWLVTNDPNGIFQKSGIIDS--------I--------KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI 325 (419)
Q Consensus 262 G~~~~~~~~~~~~~~~~~~~--------l--------~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (419)
|.+++..+......+.+... + +......++++.....++.++++.......++..++.+...++
T Consensus 241 ~~l~v~~~~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~ 320 (406)
T TIGR01814 241 AGAFVHEKHAHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKKSLLLTDY 320 (406)
T ss_pred eEEEEehhhhhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 33333221100000000000 0 0000012456667777777777654344567778888888888
Q ss_pred HHHHhhcC----CCCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-
Q 014769 326 CYDGVKEI----PCISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C- 395 (419)
Q Consensus 326 l~~~l~~~----~~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~- 395 (419)
+.+.|+++ +++.++ .|. .+..+.+.++ . +..++...| .++||.+... ..+.+|+|+ .
T Consensus 321 l~~~l~~~~~~~~~~~i~-~~~~~~~r~~~v~~~~~-~------~~~~~~~~L-~~~gi~v~~~----~~~~iRiS~~~~ 387 (406)
T TIGR01814 321 LEELIKARCGGPPVLTII-TPRDHAQRGCQLSLTHP-V------PGKAVFQAL-IKRGVIGDKR----EPSVIRVAPVPL 387 (406)
T ss_pred HHHHHHhhcCCCCceEEe-CCCChhhcCCeEEEEec-C------CHHHHHHHH-HHCCEEEecc----CCCeEEEechhc
Confidence 98888764 345533 331 1234445554 1 356676666 5679987532 246899998 3
Q ss_pred -cCHHHHHHHHHHHHHHH
Q 014769 396 -AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 396 -~~~~~l~~~l~~l~~~~ 412 (419)
+++++|+.+++.|++++
T Consensus 388 ~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 388 YNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 48899999999998764
No 236
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.90 E-value=7.1e-21 Score=179.00 Aligned_cols=302 Identities=18% Similarity=0.195 Sum_probs=201.7
Q ss_pred HHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCCCCCc
Q 014769 66 DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPGWPYY 144 (419)
Q Consensus 66 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~~~~~ 144 (419)
+++.+.+....+ .......++++.+++++ + .+++++++|+++++..++.++ ..+||+|+++.++|...
T Consensus 3 ~~~~~~~~~~~~---~~~~~~~~~~~~la~~~------~--~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~ 71 (352)
T cd00616 3 EAVEEVLDSGWL---TLGPKVREFEKAFAEYL------G--VKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVAT 71 (352)
T ss_pred HHHHHHHHcCCc---cCCHHHHHHHHHHHHHh------C--CCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHH
Confidence 445555655432 22335789999999998 2 357888889999999999998 58999999999999998
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 224 (419)
...+...|.+++.+++++ .++.+|++.+++.++++++++++++ ++|...+ +++|.++|+++|+++|+|++|+.
T Consensus 72 ~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~---~~~i~~l~~~~~i~li~D~a~~~ 144 (352)
T cd00616 72 ANAILLLGATPVFVDIDP-DTYNIDPELIEAAITPRTKAIIPVH---LYGNPAD---MDAIMAIAKRHGLPVIEDAAQAL 144 (352)
T ss_pred HHHHHHcCCeEEEEecCC-CcCCcCHHHHHHhcCcCCeEEEEEC---CCCCcCC---HHHHHHHHHHcCCeEEEECCCCC
Confidence 888899999999998754 3577899999999987888888764 6898887 88899999999999999999986
Q ss_pred cccCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc--------------
Q 014769 225 LTFGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-------------- 288 (419)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-------------- 288 (419)
...... ..+..+. .+.+.|++ |.+ ++.+.|+++++++ ++.+.++.....
T Consensus 145 g~~~~~--~~~~~~~----d~~~~S~~~~K~~--~~~~gg~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (352)
T cd00616 145 GATYKG--RKVGTFG----DAGAFSFHPTKNL--TTGEGGAVVTNDE-------ELAERARLLRNHGRDRDRFKYEHEIL 209 (352)
T ss_pred CCeECC--EEcccCc----ceeEEcCCCCCCC--cccCceEEEECCH-------HHHHHHHHHHHcCCCCCCCcccccee
Confidence 432110 0111111 25566766 875 4445688887642 355555433211
Q ss_pred --ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEEEeecCcccccCCCC
Q 014769 289 --YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMVTMVKLNPWLLEDIND 362 (419)
Q Consensus 289 --~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~~~~~~~~~~~~~~~ 362 (419)
....+.......... .+.+++..++.+++.+++.+.|.+++++..+..+. ....+.+.++.. ...+
T Consensus 210 ~~~~~~~~~~aa~~~~~-----l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 281 (352)
T cd00616 210 GYNYRLSEIQAAIGLAQ-----LEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPE---AGES 281 (352)
T ss_pred eeccCcCHHHHHHHHHH-----HHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCc---CCCC
Confidence 011122211111111 23456677778889999999999888887442222 123333444420 0124
Q ss_pred HHHHHHHHHHhcCeEeecCCCCC----------------C-------CCeEEEEee--cCHHHHHHHHHHHH
Q 014769 363 DIEFALKLAKEESVIVTPGIYVG----------------L-------KNWLRIAFC--AEPSALKDGLGRMK 409 (419)
Q Consensus 363 ~~~~~~~ll~~~gv~v~~g~~~~----------------~-------~~~~Ris~~--~~~~~l~~~l~~l~ 409 (419)
..++...| .++||.+....... . .+.+|+++. .++++++.+++.|+
T Consensus 282 ~~~v~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 282 RDELIEAL-KEAGIETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred HHHHHHHH-HHCCCCeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 66777666 66799664322110 0 257999994 68999999988773
No 237
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=6.2e-21 Score=183.13 Aligned_cols=351 Identities=17% Similarity=0.089 Sum_probs=216.5
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.-... .-.-+|.+.+++.+++..... +....+..+.+..+++.+.+..+. ...+.++++++++
T Consensus 52 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p~-~~~~~v~f~~sGs 127 (443)
T PRK06058 52 DVDGNRLIDLGSGIAVTS-VGNSAPRVVEAVREQVARFTH--TCFMVTPYEGYVAVAEQLNRLTPG-DHEKRSALFNSGA 127 (443)
T ss_pred eCCCCEEEEcCcchhhhc-cCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCCC-CCCCEEEEeCCcH
Confidence 345888999988843221 123579999999999876322 222223346666677776654331 1125899999999
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCCCc----cc--------C
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPERNW----EV--------D 169 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~----~~--------~ 169 (419)
+|++.+++.... ..++|+...++|+++...+..... .+..++.....+. .. .
T Consensus 128 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (443)
T PRK06058 128 EAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARA 207 (443)
T ss_pred HHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHH
Confidence 999999985432 237899999999987644432211 1111111100000 00 1
Q ss_pred hHHHHHhhcCCccEEEEeCCCCcc-ccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769 170 LDAVEALADKNTAAMVIINPGNPC-GNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~npt-G~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
++.+++.+..+..+.+|..|-+.. |.. .+.+++++|.++|++||+++|.||++.++...|..+ ....++..+.++
T Consensus 208 ~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfgRtG~~f-a~~~~gv~PDiv-- 284 (443)
T PRK06058 208 ITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWF-ACEHEGIVPDLI-- 284 (443)
T ss_pred HHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcChhhh-HHHhcCCCCCEE--
Confidence 222333333344566778885544 444 579999999999999999999999999886665432 122233333334
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEIC 326 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 326 (419)
+++|.++ .|+++|++++++ ++++.+.... ..+++.+++++.++.+.|+...++ +..++++++.+++
T Consensus 285 -~~gK~l~-~G~Pi~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l 351 (443)
T PRK06058 285 -TTAKGIA-GGLPLSAVTGRA--------EIMDAPHPGGLGGTYGGNPVACAAALAAIETIEED---DLVARARQIEALM 351 (443)
T ss_pred -EEccccc-CCCccEEEEEcH--------HHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHH
Confidence 4579975 799999999875 5666665432 346778999999998888753222 3344555556666
Q ss_pred HHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecC
Q 014769 327 YDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAE 397 (419)
Q Consensus 327 ~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~ 397 (419)
.+.|++ .+.+..+ ... |.++.+.+..... ...+ ...+...+ .++||.+.|+..+ .+++|+.+ ..+
T Consensus 352 ~~~L~~l~~~~~~i~~v-rg~-G~~~~i~~~~~~~-~~~~~~~~~~l~~~~-~~~Gv~~~~~~~~--~~~lr~~Ppl~~t 425 (443)
T PRK06058 352 TDRLRALAAEDDRIGDV-RGR-GAMIAIELVKPGT-TEPDAELTKALAAAA-HAAGVIVLTCGTY--GNVIRLLPPLVIG 425 (443)
T ss_pred HHHHHHHHhhCCcEEee-ecc-ceEEEEEEecCCC-CCCcHHHHHHHHHHH-HHCCeEEeccCCC--CCEEEEECCCccC
Confidence 666654 2222212 344 4444454522100 0001 12344444 5689999887554 36899986 579
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014769 398 PSALKDGLGRMKAFCQR 414 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~ 414 (419)
+++|++++++|++++++
T Consensus 426 ~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 426 DELLREGLDVLEAALAD 442 (443)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999999875
No 238
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=5.5e-21 Score=183.60 Aligned_cols=355 Identities=15% Similarity=0.067 Sum_probs=215.4
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|..... .-.-+|.+.+++.++++......... -..+....+++.+.+.. +-..+.++++++++
T Consensus 39 d~dG~~ylD~~~g~~~~~-lGh~~p~v~~a~~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~--~~~~~~v~f~~SGs 113 (433)
T PRK08117 39 GVDGKEYLDFTSGIAVAN-VGHRHPKVVQAIKEQADKLMHGPSGV--IYYESILKLAEELAEIT--PGGLDCFFFSNSGA 113 (433)
T ss_pred eCCCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhccCccccc--cCCHHHHHHHHHHHHhC--CCCCCEEEEeCcHH
Confidence 345889999998843221 12367899999999987532211110 11233444444444322 22346899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCC--Ccc--------cChH
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPER--NWE--------VDLD 171 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~--~~~--------~~~~ 171 (419)
+|++.+++.... .| .+|+..+.+|++.......... .+..++..... .+. -+++
T Consensus 114 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (433)
T PRK08117 114 EAIEGALKLAKHVTKRPYIISFTGCFHGRTLGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLR 193 (433)
T ss_pred HHHHHHHHHHHHhcCCCeEEEECCCcCCcCHHHHhhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHH
Confidence 999999987432 23 6788888889876443321110 01122211000 000 1345
Q ss_pred HHHHhhc----CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 172 AVEALAD----KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 172 ~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
.+++.++ .+..+.+++.| ....|.+ .+.++++++.++|++||+++|+||+|.++...|.... ...++...
T Consensus 194 ~l~~~~~~~~~~~~~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~-~~~~gv~p--- 269 (433)
T PRK08117 194 DLESLFKHQVTPEEVAAVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFA-AQTFGVVP--- 269 (433)
T ss_pred HHHHHHHhccCCCcEEEEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchh-HhhcCCCC---
Confidence 5555543 23455666777 4555664 6899999999999999999999999998766664322 12222221
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
.+.++||.++ +|+++|++++++ ++++.+.... ..+++.+++++.++.+.|+....+ ...++++++.+
T Consensus 270 Di~t~sK~lg-~G~pigav~~~~--------~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~ 337 (433)
T PRK08117 270 DIMTIAKGIA-SGLPLSAVVASK--------ELMEQWPLGSHGTTFGGNPVACAAALATLEVIKEE---KLLDNANEMGA 337 (433)
T ss_pred CEeehhhhcc-CCCcceeEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHH
Confidence 2358999976 799999999865 5666664332 334567888888888888753222 23334444455
Q ss_pred HHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCH
Q 014769 325 ICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEP 398 (419)
Q Consensus 325 ~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~ 398 (419)
++.+.|++ ++ +. ...+..|.++++.+..............+.+.+.++||.+.+... ..+++|+++ ..++
T Consensus 338 ~l~~~L~~l~~~~~-~~-~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g~--~~~~lRl~p~~~~t~ 413 (433)
T PRK08117 338 YALERLEVLKEKHP-VI-GDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCGN--AGNVLRMIPPLTVTK 413 (433)
T ss_pred HHHHHHHHHHhcCC-ce-eeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecCC--CCCEEEEeCCccCCH
Confidence 55555543 32 21 224455677777774321000001123333444678998876422 247899996 5799
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q 014769 399 SALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 399 ~~l~~~l~~l~~~~~~~~~ 417 (419)
++|++++++|.++++++.+
T Consensus 414 ~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 414 EEIDEGLDILDEALTEYEA 432 (433)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999988754
No 239
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=6.3e-21 Score=180.05 Aligned_cols=214 Identities=16% Similarity=0.148 Sum_probs=150.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~ 160 (419)
-..++++.++++. +.+ +.++ +++|+.++..++. +.++||+|++++|.|.+.. ..+...|+++..++.
T Consensus 55 ~~~~le~~lA~l~------g~~-~~v~-~~sG~~ai~~~l~-~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 125 (390)
T PRK08064 55 TREALEDIIAELE------GGT-KGFA-FASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDM 125 (390)
T ss_pred hHHHHHHHHHHHh------CCC-CeEE-ECCHHHHHHHHHH-HhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECC
Confidence 4578999999987 333 3444 4555778888886 6689999999999998533 445668998888865
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++ .++
T Consensus 126 -------~d~~~l~~~l~~~tklV~l~~p~NptG~~~d---l~~I~~la~~~g~~vvvD~a~~~~~~~----~~~-~~g- 189 (390)
T PRK08064 126 -------TNLEEVAQNIKPNTKLFYVETPSNPLLKVTD---IRGVVKLAKAIGCLTFVDNTFLTPLLQ----KPL-DLG- 189 (390)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCcEecc---HHHHHHHHHHcCCEEEEECCCCccccc----Cch-hhC-
Confidence 2688999999888999999999999999998 889999999999999999999764321 112 223
Q ss_pred CCcEEEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
..+++.|++|.++.+ |...|++++.++ ++++.++...... +.....+.+.. ++.. ...+..+.++.
T Consensus 190 --~Divv~S~tK~~~G~~~~laG~~v~~~~-------~~~~~l~~~~~~~-g~~~~~~~a~l-~~~g--l~tl~~R~~~~ 256 (390)
T PRK08064 190 --ADVVLHSATKFLAGHSDVLAGLAVVKDE-------ELAQKLYFLQNSF-GAVLGVQDCWL-VLRG--LKTLHVRLEHS 256 (390)
T ss_pred --CcEEEeecceeccCCccceeEEEEeCCH-------HHHHHHHHHHHhc-CCCCCHHHHHH-HHcc--cCcHHHHHHHH
Confidence 248899999997643 456787776542 4677777665422 22222222221 2222 23355666677
Q ss_pred HHHHHHHHHHhhcCCCC
Q 014769 320 RESAEICYDGVKEIPCI 336 (419)
Q Consensus 320 ~~~~~~l~~~l~~~~~~ 336 (419)
.++...+.+.|+++|.+
T Consensus 257 ~~~a~~la~~L~~~~~v 273 (390)
T PRK08064 257 SETANKIALYLQEHPKV 273 (390)
T ss_pred HHHHHHHHHHHhcCCCc
Confidence 77888888888876544
No 240
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.90 E-value=3e-21 Score=170.42 Aligned_cols=327 Identities=15% Similarity=0.176 Sum_probs=213.5
Q ss_pred eeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHH
Q 014769 45 VPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVIL 124 (419)
Q Consensus 45 i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~ 124 (419)
++|...+ .-.+.|+++++|.++-..+. ..|+..+-..++.+.+++.+ + ...++|++++|.++..++
T Consensus 2 ~~f~SDn-----~~g~~~~m~eam~~a~~~~~-~~YG~D~~~~~~e~~~ae~~------g--~~a~~Fv~sGT~aN~lal 67 (342)
T COG2008 2 IDFRSDN-----VAGPTPEMREALAAANAVGD-DVYGEDPTTNALEQRIAELF------G--KEAALFVPSGTQANQLAL 67 (342)
T ss_pred CccccCc-----cCCCCHHHHHHHHhccccCC-CCCCCCHHHHHHHHHHHHHh------C--CceEEEecCccHHHHHHH
Confidence 4566554 23568999999987753332 37888777777888888776 2 278999999999999999
Q ss_pred HHhcCCCCeEEeeCCCCCCcHH--HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccC
Q 014769 125 SVLARPGANVLLPRPGWPYYEG--IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNV 196 (419)
Q Consensus 125 ~~l~~~gd~vlv~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~ 196 (419)
.++++||+.|++..-.|..... ..+..+ ....++..+..+..+++|+++..+.+ .++.+++.+.+|..|++
T Consensus 68 ~~~~~~~~~vi~~~~aHi~~~E~Ga~~~~~-~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtV 146 (342)
T COG2008 68 AAHCQPGESVICHETAHIYTDECGAPEFFG-GGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTV 146 (342)
T ss_pred HHhcCCCCeEEEeccccceecccCcHHHHc-CCceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccCCCcee
Confidence 9999999999999887764321 223333 23344555666778999999997763 34556666666678999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+|.++|++|.++|+++|+.|+.|.+--....-... ++...+..... .+..++||..+.+ +|.++.-+.
T Consensus 147 y~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg-~~~~~~~~~~D-~v~~~~tK~g~~~---~gAiv~gn~------- 214 (342)
T COG2008 147 YPLDELEAISAVCKEHGLPLHMDGARLANALVALG-VALKTIKSYVD-SVSFCLTKGGGAP---VGAIVFGNR------- 214 (342)
T ss_pred cCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcC-CCHHHHHhhCC-EEEEecccCCcce---eeeEEEcCH-------
Confidence 99999999999999999999999875432111111 22223322222 4444789995444 588877663
Q ss_pred hHHHHHHhhhccc-cCCch--HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769 277 GIIDSIKDCLSIY-SDIPT--FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 277 ~~~~~l~~~~~~~-~~~~~--~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~ 353 (419)
++++.++.++... ...+. +...+...+|++ +.......+-.+....|.+.|...||+... .|...+.++++++
T Consensus 215 ~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~---~~~~~~~~Han~mA~~La~~~~~~~G~~~~-~~~~tN~vf~~l~ 290 (342)
T COG2008 215 DFAKRARRWRKRAGGLMRKARFLAAQGLYALED---DVWRLAADHANAMAARLAEGLEAKPGVKLA-FPVETNMVFVRLP 290 (342)
T ss_pred HHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhhhcCCceec-cCCcccEEEEECC
Confidence 5777777665322 22222 222233334443 323333344445588889999877798844 6667888889887
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
.... +...+... +.+.|+...+++ ..+|+.+ .++++++++++..++.++
T Consensus 291 ~~~i----~~l~~~~~-~~~~~~~~~~~~-----~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 291 ESAI----EALRLAGA-LFYRGVLIGAHG-----EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred hHHH----HHHHhhch-hheeeeeccCCC-----ceEEEEeeccCCHHHHHHHHHHHHHhh
Confidence 5311 11122222 234455554432 3688888 478999999999988764
No 241
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.90 E-value=2.9e-20 Score=175.43 Aligned_cols=310 Identities=18% Similarity=0.254 Sum_probs=198.5
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCCC
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRPG 140 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p~ 140 (419)
+.-.+++.+.+..+.. |+. ..+++++.+++.+..| .+++++++|+++|+..++.++ .++||+|+++.|+
T Consensus 11 ~~~~~~~~~~l~~~~~--~g~----~~~~~~~e~~la~~~g----~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t 80 (375)
T PRK11706 11 GTELDYIQQAMSSGKL--CGD----GGFTRRCQQWLEQRFG----SAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (375)
T ss_pred HHHHHHHHHHHHcCCc--cCC----CHHHHHHHHHHHHHhC----CCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCC
Confidence 3446677777766533 322 2455666665555433 468999999999999987766 6899999999999
Q ss_pred CCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 141 WPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 141 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
|..+...+...|++++.++++++ ++.+|++++++++++++++|++++ ++|...+ +++|.++|+++|+++|+|+
T Consensus 81 ~~~~~~~~~~~G~~~v~~d~d~~-~~~~d~~~le~~i~~~tk~i~~~~---~~G~~~~---~~~i~~la~~~~i~vIeD~ 153 (375)
T PRK11706 81 FVSTANAFVLRGAKIVFVDIRPD-TMNIDETLIEAAITPKTRAIVPVH---YAGVACE---MDTIMALAKKHNLFVVEDA 153 (375)
T ss_pred cHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHhcCCCCeEEEEeC---CCCCccC---HHHHHHHHHHcCCEEEEEC
Confidence 99999999999999999998654 477999999999988888888764 6898877 7899999999999999999
Q ss_pred cccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc---------
Q 014769 221 VYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI--------- 288 (419)
Q Consensus 221 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~--------- 288 (419)
+|+.+. +++.. +..++. +.+.||+ |.+ .+|.+.++++.+. ++.++++.....
T Consensus 154 a~a~g~~~~~~~---~g~~~~----~~~~Sf~~~K~l-~~g~gG~~~~~~~--------~~~~~~~~~~~~g~~~~~~~~ 217 (375)
T PRK11706 154 AQGVMSTYKGRA---LGTIGH----IGCFSFHETKNY-TAGEGGALLINDP--------ALIERAEIIREKGTNRSQFFR 217 (375)
T ss_pred ccccccccCCee---eecCcC----EEEEeCCCCccc-cccCCeEEEECCH--------HHHHHHHHHHHcCCCcchhhc
Confidence 999865 33322 222221 3444555 986 4577766665432 455555443321
Q ss_pred ---------ccCCchHHHHHHHH-HHcccchHHHHHHHHHHHHHHHHHHHHhhcCC--C-CCCCCCCC----ceEEEEee
Q 014769 289 ---------YSDIPTFIQGAIPQ-ILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--C-ISCPNKPE----GSMVTMVK 351 (419)
Q Consensus 289 ---------~~~~~~~~~~a~~~-~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~----~g~~~~~~ 351 (419)
..+.+.......++ .+.+ -+.+++..++-+++.+.+.+.|..++ + +.....|. ...++++.
T Consensus 218 ~~~~~~~~~~~g~~~~~~~~~aa~~~~q--l~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (375)
T PRK11706 218 GQVDKYTWVDIGSSYLPSELQAAYLWAQ--LEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIK 295 (375)
T ss_pred cCCCcceeeecccccCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEE
Confidence 01222221111111 1221 23456666666677777777777664 2 32111122 23355666
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCCC----------C-----C-------CCeEEEEee--cCHHHHHHHHHH
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYV----------G-----L-------KNWLRIAFC--AEPSALKDGLGR 407 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------~-----~-------~~~~Ris~~--~~~~~l~~~l~~ 407 (419)
++.. .+..++...| .++||.+.+.... + . ...+-|.+. .++++++..++.
T Consensus 296 ~~~~-----~~r~~l~~~L-~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~~~~~~~i~~~ 369 (375)
T PRK11706 296 LRDL-----EDRSALINFL-KEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTDVEQRTVIDT 369 (375)
T ss_pred ECCc-----CCHHHHHHHH-HHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccCCCCCCHHHHHHHHHH
Confidence 6531 2456666666 6679986533100 0 0 234555553 578999999999
Q ss_pred HHHHH
Q 014769 408 MKAFC 412 (419)
Q Consensus 408 l~~~~ 412 (419)
|++++
T Consensus 370 i~~~~ 374 (375)
T PRK11706 370 ILEFF 374 (375)
T ss_pred HHHHh
Confidence 88764
No 242
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.90 E-value=3.9e-21 Score=180.47 Aligned_cols=226 Identities=15% Similarity=0.162 Sum_probs=156.0
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g 152 (419)
+.+|+.+ ...+|++.++++. +. +..++++++++++..++ .++++||+|++++|+|.+... .+...|
T Consensus 44 y~r~~~p-~~~~Le~~lA~l~------g~--~~~~~~~sG~aai~~~~-~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G 113 (377)
T PRK07671 44 YSRTGNP-TRAALEELIAVLE------GG--HAGFAFGSGMAAITAVM-MLFSSGDHVILTDDVYGGTYRVMTKVLNRFG 113 (377)
T ss_pred cCCCCCh-HHHHHHHHHHHHh------CC--CceEEeCCHHHHHHHHH-HHhCCCCEEEECCCccchHHHHHHHHHhcCC
Confidence 3344443 4678999999987 32 23455555677887765 567899999999999984332 334568
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
++++.++. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+. .
T Consensus 114 ~~v~~v~~-------~d~~~l~~ai~~~tklV~le~P~NPtg~~~d---l~~I~~la~~~g~~lvvD~a~~~~~~~-~-- 180 (377)
T PRK07671 114 IEHTFVDT-------SNLEEVEEAIRPNTKAIYVETPTNPLLKITD---IKKISTIAKEKGLLTIVDNTFMTPYWQ-S-- 180 (377)
T ss_pred eEEEEECC-------CCHHHHHHhcCCCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCCccccC-C--
Confidence 88877753 3789999999889999999999999999988 889999999999999999999753322 1
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~ 310 (419)
++ .++. .+++.|+||.++.++ .-.|++++.++ ++.+.++...... ...++...+. ++.. .+
T Consensus 181 -p~-~~g~---Divv~S~sK~l~G~~~~~~G~~v~~~~-------~l~~~~~~~~~~~g~~~~~~~a~l---~~~~--l~ 243 (377)
T PRK07671 181 -PI-SLGA---DIVLHSATKYLGGHSDVVAGLVVVNSP-------ELAEDLHFVQNSTGGILGPQDSWL---LLRG--LK 243 (377)
T ss_pred -hh-hhCC---eEEEecCcccccCCccceeEEEEeCcH-------HHHHHHHHHHHhhcCCCCHHHHHH---HHcC--cC
Confidence 12 2222 488999999987554 34566766542 4666666555432 2334333332 2222 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
.+..+.++..++...+.+.|++.|++..+..|
T Consensus 244 tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p 275 (377)
T PRK07671 244 TLGIRMEEHETNSRAIAEFLNNHPAVNKVYYP 275 (377)
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCCCeeEEECC
Confidence 36667777888899999999887665433333
No 243
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.90 E-value=1.8e-20 Score=173.93 Aligned_cols=353 Identities=16% Similarity=0.086 Sum_probs=225.3
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|..... .-..+|.+.+++.+++.......+... ..+....+++.|...... ...+.++++++++
T Consensus 52 DvdG~~ylDf~sgi~v~~-~GH~hP~Vv~Av~~q~~~~~h~~~~~~--~~e~~v~~ae~L~~~~p~-~~~~~~~f~~sGa 127 (447)
T COG0160 52 DVDGNEYLDFLSGIAVLN-LGHNHPRVVEAVKRQLAKLNHTHTRDL--YYEPYVELAEKLTALAPG-SGLKKVFFGNSGA 127 (447)
T ss_pred eCCCCEEEEcccCcchhc-cCCCCHHHHHHHHHHHHHhhcccCCcc--cchhHHHHHHHHHHhCCc-ccCCeEEecCCcH
Confidence 346899999999744432 224689999999999876432222221 124444555555442221 1467899999999
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcC--------------CEEEEEeccCC--CCcc--------cChH
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQ--------------VEVRHFDLLPE--RNWE--------VDLD 171 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g--------------~~~~~~~~~~~--~~~~--------~~~~ 171 (419)
+|++.+++.... ....|+.....|++.......+. ..+..+|.+.. ..+. ...+
T Consensus 128 eA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~ 207 (447)
T COG0160 128 EAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALE 207 (447)
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHH
Confidence 999999988643 34789999999987543322221 11333433211 1111 1233
Q ss_pred HHHHhhc-----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 172 AVEALAD-----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 172 ~l~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
.+++.+. ....+.+|..| +...|. +.|.++++++.++|++||+++|+||++.++..+| ....+..++..+.+
T Consensus 208 ~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG-~~fa~E~~gv~PDi 286 (447)
T COG0160 208 YIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTG-KMFAFEHFGVEPDI 286 (447)
T ss_pred HHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccc-cchhhhhcCCCCCE
Confidence 3444332 13345566666 676776 5799999999999999999999999999998888 44455555544444
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
+ ++||.++. |+++|.++.+. ++.+........++..|+++.+++.+.|+....+ .+.++..+.-+
T Consensus 287 v---t~aK~ig~-G~Pl~avv~r~--------ei~~~~~g~~~~Tf~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~ 351 (447)
T COG0160 287 V---TLAKSLGG-GLPLSAVVGRA--------EIMDWPPGGHGGTFGGNPVACAAALAVLDVIEEE---NLLERAAELGE 351 (447)
T ss_pred E---EecccccC-CCceeEEeccH--------HhcccCCcccCCCCCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHH
Confidence 5 67899655 99999999876 4555222333456888999999998888864333 34444555555
Q ss_pred HHHHHhhc----CCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--e
Q 014769 325 ICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--C 395 (419)
Q Consensus 325 ~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~ 395 (419)
++++.|.+ .|.+- ..-.-|.++-+.+-.... +.......++.++ .++|+.+..+..+ .+.+||.+ .
T Consensus 352 ~l~~~L~~l~~~~~~Ig--dVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~-~~~Glil~~~G~~--~nviRi~PPL~ 426 (447)
T COG0160 352 YLRDRLEELQEKHPLIG--DVRGLGLMIGVELVKDRDTKEPDAELAAKIVARA-FERGLLLLTCGPH--GNVLRILPPLT 426 (447)
T ss_pred HHHHHHHHHHhhcCcee--cccccceEEEEEEecCCCCCCCCHHHHHHHHHHH-HHcCCEEeccCCC--CcEEEEeCCcc
Confidence 55555543 34222 122347777777753211 0001123455555 5679988776543 57899998 5
Q ss_pred cCHHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~~ 415 (419)
.++++++++++.|.+++++.
T Consensus 427 is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 427 ISDEELDEGLDILEEALKEA 446 (447)
T ss_pred cCHHHHHHHHHHHHHHHHhh
Confidence 69999999999999999864
No 244
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.90 E-value=1.5e-20 Score=179.03 Aligned_cols=354 Identities=15% Similarity=0.106 Sum_probs=215.8
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|..+.. .-.-+|.+.+++.+++..... +.......+.+..+++.+.+..+.+ ..+.++++++
T Consensus 34 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p~~-~~~~v~f~~S 109 (425)
T PRK07495 34 IWDKEGRRYIDFAAGIAVVN-TGHRHPRVIAAVKAQLDRFTH--TCHQVVPYENYVRLAERLNALVPGD-FAKKTIFVTT 109 (425)
T ss_pred EEeCCCCEEEEccccHHhhc-cCCCCHHHHHHHHHHHhhccC--cccCccCCHHHHHHHHHHHHhCCCC-CCCEEEECCc
Confidence 44456899999988843321 123678999999999876432 1111111234444555554422211 1268999999
Q ss_pred HHHHHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCcccC----hHHHHH
Q 014769 116 CKQAVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNWEVD----LDAVEA 175 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~~----~~~l~~ 175 (419)
+++|++.+++.... . ..+|+....+|++........ +. .+..++.+... .+.+ ++.+++
T Consensus 110 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~ 188 (425)
T PRK07495 110 GAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDK 188 (425)
T ss_pred hHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHH
Confidence 99999999987643 2 367899999998864333221 10 12223321111 1122 344455
Q ss_pred hhc----CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769 176 LAD----KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (419)
Q Consensus 176 ~~~----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 249 (419)
.+. .+..+.+++.| ..-+| ..+|.+++++|.++|++||+++|+||+|.++...|..+ ....++. ...+.+
T Consensus 189 ~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~tG~gr~G~~~-a~~~~gv---~pDi~t 264 (425)
T PRK07495 189 LFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLF-AMEHHEV---AADLTT 264 (425)
T ss_pred HHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhcCCcCCCce-eecccCC---CCCEEe
Confidence 543 23345566667 32377 45899999999999999999999999999876665431 2222222 234568
Q ss_pred CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
+||.+ .+|+++|++++++ ++++.+... ...+++.+++.+.++.++++....+. ..++++++.+++.+
T Consensus 265 lsK~l-~~G~pigav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~~---l~~~~~~~g~~l~~ 332 (425)
T PRK07495 265 MAKGL-AGGFPLAAVTGRA--------EIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIEEED---LCERANQLGNRLKQ 332 (425)
T ss_pred ehhhh-cCCccceEEEEcH--------HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHhch---HHHHHHHHHHHHHH
Confidence 99996 4789999999975 566665443 23456778888887777766532222 22333344444444
Q ss_pred Hhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHH
Q 014769 329 GVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPS 399 (419)
Q Consensus 329 ~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~ 399 (419)
.|++ +|.+..+ -..|+++|+.+.+... ...+ ...+...+ .++|+++.+.... .+.+|+.+ ..+++
T Consensus 333 ~L~~l~~~~~~i~~v--rG~Gl~~~iel~~~~~-~~~~~~~~~~~~~~~-~~~Gvl~~~~g~~--~~~~r~~Ppl~it~~ 406 (425)
T PRK07495 333 RLASLRETVPEIADI--RGPGFMNAVEFNDADS-GLPSAEFANRVRLKA-LEKGLILLTCGVH--GNVIRFLAPITIQDD 406 (425)
T ss_pred HHHHHHhhCCCeeee--ecCceEEEEEEecCCC-CCccHHHHHHHHHHH-HHCCeEEeecCCC--CCEEEEeCCCccCHH
Confidence 4432 3433212 2348999998853211 0011 12344444 5689998764221 47899997 46999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014769 400 ALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~~ 416 (419)
++++++++|++++++..
T Consensus 407 ~id~~~~~l~~~l~~~~ 423 (425)
T PRK07495 407 VFAEALDILEASILEAS 423 (425)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 245
>PLN02509 cystathionine beta-lyase
Probab=99.89 E-value=8.4e-21 Score=180.64 Aligned_cols=228 Identities=18% Similarity=0.183 Sum_probs=157.2
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCC
Q 014769 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQV 153 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~ 153 (419)
..|... |.+ .++++.+.+.+.. ..+++++++|+++++..++ .+.++||+|+++.|.|.++. ..+...|+
T Consensus 125 ~~Y~r~-gnp-t~~aLE~~lA~le----g~e~ai~~~SG~aAi~~il-~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~ 197 (464)
T PLN02509 125 YDYTRS-GNP-TRDALESLLAKLD----KADRAFCFTSGMAALSAVT-HLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGV 197 (464)
T ss_pred CccCCC-CCH-HHHHHHHHHHHHh----CCCEEEEeCcHHHHHHHHH-HHhCCCCEEEEcCCchhhHHHHHHHHHHHCCe
Confidence 357764 554 5666666665533 3456777788899987666 56789999999999999875 33456788
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 233 (419)
.+..++. .|++++++++++++++|++++|+||+|.+.+ +++|+++|+++|+++|+|++|...... .
T Consensus 198 ~v~~vd~-------~d~e~l~~ai~~~TklV~lesPsNPtG~i~D---l~~I~~lAk~~g~~lIVD~A~a~~~~~----~ 263 (464)
T PLN02509 198 VVKRVNT-------TNLDEVAAAIGPQTKLVWLESPTNPRQQISD---IRKIAEMAHAQGALVLVDNSIMSPVLS----R 263 (464)
T ss_pred EEEEeCC-------CCHHHHHHhCCcCCeEEEEECCCCCCCCHHH---HHHHHHHHHHcCCEEEEECCccccccC----C
Confidence 8777642 3688999999888999999999999999765 999999999999999999998754321 1
Q ss_pred CccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHH
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
++ ..+. .+++.|++|.++.+| .-.|+++++++ .+.+.++..... ....++...+.+...| +.
T Consensus 264 pl-~~ga---Divv~S~tK~l~G~gdv~gG~v~~~~~-------~l~~~~~~~~~~~g~~l~p~~A~l~lr~L-----~t 327 (464)
T PLN02509 264 PL-ELGA---DIVMHSATKFIAGHSDVMAGVLAVKGE-------KLAKEVYFLQNSEGSGLAPFDCWLCLRGI-----KT 327 (464)
T ss_pred hh-hcCC---cEEEecCcccccCCCccceeEEEeccH-------HHHHHHHHHHHhcCCCcCHHHHHHHHhhh-----hh
Confidence 12 2222 388999999976644 34677776542 234444433222 1223333333332222 44
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 312 FCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
+..+.++..++...+.+.|+++|.+..|..|
T Consensus 328 L~~R~~r~~~nA~~la~~L~~~p~V~~V~yP 358 (464)
T PLN02509 328 MALRIEKQQENARKIAMYLSSHPRVKKVYYA 358 (464)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCccEEECC
Confidence 6777788888999999999988776544444
No 246
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.89 E-value=6.4e-21 Score=179.06 Aligned_cols=221 Identities=15% Similarity=0.156 Sum_probs=149.5
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcC
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQ 152 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g 152 (419)
+.+|+.+ -...|++.++++. + .+..+++++++.++..++. ++++||+|++++|.|.+.. ..+...|
T Consensus 44 y~r~~~p-~~~~Le~~la~l~------g--~~~al~~~SG~~Al~~~l~-~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~g 113 (380)
T PRK06176 44 YSRSGNP-TRFALEELIADLE------G--GVKGFAFASGLAGIHAVFS-LFQSGDHVLLGDDVYGGTFRLFDKVLVKNG 113 (380)
T ss_pred ccCCCCh-hHHHHHHHHHHHh------C--CCCEEEECCHHHHHHHHHH-HcCCCCEEEEcCCChhHHHHHHHHHHHhcC
Confidence 3344443 3678999999987 2 2344566666789987664 6689999999999997543 3455678
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 232 (419)
+++..++. .|++.+++++++++++|++.+|+||||.+.+ +++|.++|+++|+++|+|++|+...+. .
T Consensus 114 i~v~~vd~-------~d~e~l~~ai~~~t~lV~lesP~Nptg~~~d---i~~I~~la~~~gi~vivD~t~a~~~~~-~-- 180 (380)
T PRK06176 114 LSCTIIDT-------SDLSQIKKAIKPNTKALYLETPSNPLLKITD---LAQCASVAKDHGLLTIVDNTFATPYYQ-N-- 180 (380)
T ss_pred eEEEEcCC-------CCHHHHHHhcCcCceEEEEECCCCCCceecC---HHHHHHHHHHcCCEEEEECCccccccC-C--
Confidence 77776653 3789999999888999999999999999998 889999999999999999999864332 1
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~ 310 (419)
++ .++.+ +++.|++|.++.+| .-.|++++.++ ++.+.++...... ...++...+.+...+ .
T Consensus 181 -p~-~~gaD---ivv~S~tK~l~g~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~~~l~~~gl-----~ 243 (380)
T PRK06176 181 -PL-LLGAD---IVVHSGTKYLGGHSDVVAGLVTTNNE-------ALAQEIAFFQNAIGGVLGPQDSWLLQRGI-----K 243 (380)
T ss_pred -cc-ccCCC---EEEecCceeccCCccceeeEEEecHH-------HHHHHHHHHHHHhcCCCCHHHHHHHHhcc-----C
Confidence 22 22333 88899999987666 34566665432 4555555444322 222333323222222 2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
.+..+.++..++...+.+.|++.|.+.
T Consensus 244 tl~~R~~~~~~~a~~la~~L~~~p~v~ 270 (380)
T PRK06176 244 TLGLRMEAHQKNALCVAEFLEKHPKVE 270 (380)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 244455555666777777777765543
No 247
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=2.2e-20 Score=177.59 Aligned_cols=157 Identities=17% Similarity=0.188 Sum_probs=128.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 160 (419)
-..++++.+|++. + .+..++|+++++|++.++.++.++||+|+++...|.+....+ ...|+++++++.
T Consensus 65 ~~~~le~~lA~l~------g--~~~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~ 136 (433)
T PRK08134 65 TVAVLEERVAALE------G--GVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKP 136 (433)
T ss_pred HHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECC
Confidence 4678999999987 2 235788999999999999999999999999999998654433 457888888764
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
+ |++.+++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|.++..... ..++ .++.
T Consensus 137 ~-------d~~~l~~~i~~~TklV~~e~~~np~g~v~D---i~~I~~la~~~gi~livD~t~a~~~~----~~pl-~~Ga 201 (433)
T PRK08134 137 G-------DIDGWRAAIRPNTRLLFGETLGNPGLEVLD---IPTVAAIAHEAGVPLLVDSTFTTPYL----LRPF-EHGA 201 (433)
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCcccCcccC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hcCC
Confidence 2 789999999999999999999999999999 89999999999999999999875322 1222 3344
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
+ +++.|.+|.++.+|-.+|.+++.
T Consensus 202 D---~vv~S~tK~l~g~g~~~gG~v~~ 225 (433)
T PRK08134 202 D---LVYHSATKFLGGHGTAIGGVLVD 225 (433)
T ss_pred C---EEEeccccccCCCCCceEEEEEe
Confidence 3 88899999988888777777663
No 248
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.89 E-value=2.2e-20 Score=178.01 Aligned_cols=224 Identities=17% Similarity=0.126 Sum_probs=156.3
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~ 160 (419)
-...|++.++++. + .+..++++++++|+..++.+++++||+|+++.+.|.+.. ..+...|+.++.++.
T Consensus 64 ~~~~le~~lA~l~------g--~~~al~~~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~ 135 (427)
T PRK05994 64 TNAVLEERVAALE------G--GTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADA 135 (427)
T ss_pred cHHHHHHHHHHHh------C--CCcEEEEcCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECC
Confidence 3567888999887 2 345888899999999999999999999999999998643 345677888887753
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|.... ...++ .++.
T Consensus 136 -------~d~~~l~~ai~~~tklV~vesp~NptG~v~d---l~~I~~la~~~gi~livD~a~a~~~----~~~pl-~~ga 200 (427)
T PRK05994 136 -------DDPASFERAITPRTKAIFIESIANPGGTVTD---IAAIAEVAHRAGLPLIVDNTLASPY----LIRPI-EHGA 200 (427)
T ss_pred -------CCHHHHHHhcCcCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCccccc----cCCcc-ccCC
Confidence 2788999999888999999999999999998 8899999999999999999997522 11222 2333
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc---------h--hh-----HH-----------HHHHhhhccccCCc
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ---------K--SG-----II-----------DSIKDCLSIYSDIP 293 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~---------~--~~-----~~-----------~~l~~~~~~~~~~~ 293 (419)
+ +++.|++|.++.+|-.+|.+++......+. . +. +. ...+.........+
T Consensus 201 D---ivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~ 277 (427)
T PRK05994 201 D---IVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS 277 (427)
T ss_pred c---EEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcchhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCC
Confidence 3 888999999887776677666532110000 0 00 11 11111222223334
Q ss_pred hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769 294 TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP 339 (419)
Q Consensus 294 ~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 339 (419)
+...+.+..-| +.+..+.++..++...+.+.|+++|.+..+
T Consensus 278 ~~~A~l~~~~l-----~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 278 PFNAFLILTGI-----ETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred HHHHHHHHcCc-----ccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 43333322222 346666777788888899999887765433
No 249
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=8.9e-20 Score=171.72 Aligned_cols=356 Identities=10% Similarity=0.039 Sum_probs=232.7
Q ss_pred chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHH
Q 014769 22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIAD 95 (419)
Q Consensus 22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~ 95 (419)
...|..++++-.++ ..+.|+|--.. -..++.+.+++...+.+... ..|+......+++....+
T Consensus 34 d~~~~~~~~~e~~r-----q~~~l~LiasE------N~~s~~v~~a~~s~l~nkyaeg~pg~ryy~g~~~~d~ie~l~~~ 102 (493)
T PRK13580 34 EPRIAEAIRQELAD-----QRSSLKLIASE------NYSSLAVQLAMGNLLTDKYAEGTPGHRFYAGCQNVDTVEWEAAE 102 (493)
T ss_pred CHHHHHHHHHHHHH-----HhcCceEeccc------ccCCHHHHHHhcccccccCcCCCCCccccCCCchHHHHHHHHHH
Confidence 45566666544332 34556665543 23567888887766654322 245555666778877777
Q ss_pred HHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC-------------------------------CCeEEeeCCCCCCc
Q 014769 96 YLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP-------------------------------GANVLLPRPGWPYY 144 (419)
Q Consensus 96 ~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~-------------------------------gd~vlv~~p~~~~~ 144 (419)
..++.+|. +..+|-. .+++.|+..++.++++| ||+|+..++...++
T Consensus 103 ra~~lf~a--~~anvqp-~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGH 179 (493)
T PRK13580 103 HAKELFGA--EHAYVQP-HSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGH 179 (493)
T ss_pred HHHHHhCC--CcccccC-CCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCe
Confidence 77776653 2234433 45677888888888876 79999887776544
Q ss_pred HH---HHhhcC--CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 145 EG---IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 145 ~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
.. .....+ .....++++++ ...+|.+++++.++++++.++++..+|-+ ...| +++|.++|+++|+++++|
T Consensus 180 lthg~~~n~~~~~~~~~~y~vd~~-~g~iD~d~l~~~~~~~~plvii~g~S~~~-~~~d---l~~i~eia~~~gA~L~VD 254 (493)
T PRK13580 180 LTHGFRPNISGKMFHQRSYGVDPD-TGLLDYDEIAALAREFKPLILVAGYSAYP-RRVN---FAKLREIADEVGAVLMVD 254 (493)
T ss_pred eecCcccchhhheeeeEecccCcc-cCccCHHHHHHHHhhcCCEEEEeCccccC-CCcC---HHHHHHHHHHcCCEEEEE
Confidence 21 111122 45566666543 34799999999999899999999888864 4667 899999999999999999
Q ss_pred ccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHH
Q 014769 220 EVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQ 297 (419)
Q Consensus 220 e~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~ 297 (419)
++|....+++..... .... ....++++|++|++ .|.+.|+++++. ++++.+..... ..+++.++..
T Consensus 255 ~AH~~Gligg~~~~~~~~~~--~~~D~vtgT~hKaL--~GP~GG~I~~~~--------~l~~~L~~a~P~i~gg~l~p~i 322 (493)
T PRK13580 255 MAHFAGLVAGKVFTGDEDPV--PHADIVTTTTHKTL--RGPRGGLVLAKK--------EYADAVDKGCPLVLGGPLPHVM 322 (493)
T ss_pred CchhhceeccccchhhcCCC--CCCcEEEeCChhhc--cCCCeEEEEecH--------HHHHHHhhCCCcccCCCccHHH
Confidence 999987765433210 0111 12238899999985 444569998865 57777754432 2334444444
Q ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeE
Q 014769 298 GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI 377 (419)
Q Consensus 298 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 377 (419)
.+++..+.+.......+.++++.++.+.+.+.|.+. |+..+........+++.+.+.. .....+.+.|.+.||.
T Consensus 323 AA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggTdshIV~V~lg~~~-----~~g~~a~~~L~e~GI~ 396 (493)
T PRK13580 323 AAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGTDNHLVLIDVTSFG-----LTGRQAESALLDAGIV 396 (493)
T ss_pred HHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCCCCCEEEEEeCCHH-----HHHHHHHHHHHHCCeE
Confidence 444444444222233567889999999999999987 7774322234566677775321 1233455566889999
Q ss_pred eecCCCCCC------CCeEEEEeec------CHHHHHHHHHHHHHHHHH
Q 014769 378 VTPGIYVGL------KNWLRIAFCA------EPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 378 v~~g~~~~~------~~~~Ris~~~------~~~~l~~~l~~l~~~~~~ 414 (419)
+.+-..+.. ...|||++.. ++++++++++.|.++++.
T Consensus 397 vn~i~~Ptvp~g~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 397 TNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred EccccCCCCCCCCCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 976554443 4679999832 579999999999988864
No 250
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.89 E-value=1.2e-20 Score=176.14 Aligned_cols=203 Identities=18% Similarity=0.120 Sum_probs=143.5
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
..++++++++|+..++.+++++||+|++++|.|+++.. .++..|+++..++.. +.+.+++++++++++|
T Consensus 81 ~~v~~sSG~aAi~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~-------~~e~l~~al~~~TklV 153 (395)
T PRK05967 81 GTILVPSGLAAVTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPE-------IGAGIAKLMRPNTKVV 153 (395)
T ss_pred CEEEECcHHHHHHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCC-------CHHHHHHhcCcCceEE
Confidence 34555558999999999999999999999999998754 457788888877421 3477999998899999
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC-CceeEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGW 263 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~ 263 (419)
++.+|+||++.+.+ +++|+++|+++|+++|+|++|....+. .++ .++.+ +++.|++|.++.. +.-.|+
T Consensus 154 ~lesPsNP~l~v~d---l~~I~~la~~~g~~vvVD~t~a~p~~~----~pl-~~GaD---ivv~S~tKy~~Gh~d~~~G~ 222 (395)
T PRK05967 154 HTEAPGSNTFEMQD---IPAIAEAAHRHGAIVMMDNTWATPLYF----RPL-DFGVD---ISIHAATKYPSGHSDILLGT 222 (395)
T ss_pred EEECCCCCCCcHHH---HHHHHHHHHHhCCEEEEECCccCceec----Chh-HcCCC---EEEEecccccCCCCCeeEEE
Confidence 99999999876655 999999999999999999999863221 122 23444 8999999985543 366776
Q ss_pred EEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
++.+. +..+.+.... ......++...+. ++.. -+-+.-+.++..++...+.+.|+++|.+..|..|
T Consensus 223 v~~~~--------~~~~~l~~~~~~~G~~~~p~da~l---~~rg--l~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yP 289 (395)
T PRK05967 223 VSANE--------KCWPQLLEAHGTLGLCAGPDDTYQ---ILRG--LRTMGIRLEHHRKSALEIARWLEGRPDVARVLHP 289 (395)
T ss_pred EEcCH--------HHHHHHHHHHHHcCCCCCHHHHHH---HHcC--cccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECC
Confidence 65532 3444454332 2233344444333 3332 2335566667778888889999888766544444
No 251
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.89 E-value=2.4e-20 Score=178.63 Aligned_cols=352 Identities=16% Similarity=0.103 Sum_probs=214.3
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|..+.. .-.-+|.+.+++.+++.......+.. -..+.+..+++.+.+..+ ...+.++++++
T Consensus 36 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~~--~~~~~~~~la~~l~~~~p--~~~~~v~f~~s 110 (423)
T PRK05964 36 LYLADGRELIDAISSWWVAT-HGHNHPYIDQAIREQLDRLDHVIFAG--FTHEPAERLAQRLVALTP--GGLDHVFFSDS 110 (423)
T ss_pred EEeCCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHhhCCCccccc--cCCHHHHHHHHHHHHhCC--CCCCEEEEeCC
Confidence 44456999999988843321 12357999999999987643211110 112445556666554322 12468999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHH
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~ 174 (419)
+++|++.+++.... +| .+|+....+|++....+...... +..++....+....+++.++
T Consensus 111 GseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~ 190 (423)
T PRK05964 111 GSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALE 190 (423)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCccccccccCcCCCCEEeCCCcchhHHHHHHHHH
Confidence 99999999987632 23 68999999998865433322111 11222211100011267777
Q ss_pred HhhcC--CccEEEEeCC--CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769 175 ALADK--NTAAMVIINP--GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (419)
Q Consensus 175 ~~~~~--~~~~v~i~~p--~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 249 (419)
+.+.. +..+.+++.| ++.+|... +.+++++|.++|++||+++|+||++.++...|..+ ....++.... + .+
T Consensus 191 ~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~-a~~~~~v~pD-i--~~ 266 (423)
T PRK05964 191 ALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIATGFGRTGTLF-ACEQAGVSPD-I--MC 266 (423)
T ss_pred HHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-HHHhcCCCCC-e--ee
Confidence 77742 2344555666 56677654 89999999999999999999999998876555322 1122222222 2 36
Q ss_pred CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322 (419)
Q Consensus 250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (419)
++|.++.+++++|++++++ ++.+.+... ...+++.++++..++.+.++....+ ...+++.++
T Consensus 267 ~~K~l~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~l~~~---~~~~~~~~~ 335 (423)
T PRK05964 267 LSKGLTGGYLPLAATLCTA--------EIFEAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDE---PVLERVAAL 335 (423)
T ss_pred eehhhhcCcccceEEEEcH--------HHHHhhhcCCcccccccCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHH
Confidence 7899755558999988865 577766431 1223456788877777777642211 233455555
Q ss_pred HHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769 323 AEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS 399 (419)
Q Consensus 323 ~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~ 399 (419)
.+.+.+.|+++.....+. ...-|.++.+.+..... . .....+...+ .++||.+.+. .+.+|+++. .+++
T Consensus 336 g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~~~-~-~~~~~l~~~l-~~~Gv~v~~~-----~~~lR~~p~l~~t~e 407 (423)
T PRK05964 336 SAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRPVL-E-RDGPALRAFA-LERGVLLRPL-----GNTIYLMPPYIITAE 407 (423)
T ss_pred HHHHHHHHHhhccCCCeEEeecccEEEEEEeccCcc-h-hHHHHHHHHH-HHCCeEEEec-----CCEEEEeCCcccCHH
Confidence 555555555432222111 12335565666643110 0 0134555555 5689999874 257999984 7999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014769 400 ALKDGLGRMKAFCQRH 415 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~ 415 (419)
+|+++++.+++++.++
T Consensus 408 dId~~v~~l~~al~~~ 423 (423)
T PRK05964 408 ELDRITDAIVEVADEL 423 (423)
T ss_pred HHHHHHHHHHHHHhhC
Confidence 9999999999998763
No 252
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=2.1e-19 Score=171.19 Aligned_cols=351 Identities=13% Similarity=0.026 Sum_probs=213.3
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHH-hCCCC-C----CCCCCCCCHHHHH-
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAV-RSGKF-N----CYATNSGIPPARR- 91 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~-~~~~~-~----~Y~~~~g~~~lr~- 91 (419)
+.....|..++++-.. ...+.++|-..+. ..+|.+++++...+ ..... . .|+..+...+|++
T Consensus 10 ~~~~~~~~~~~~~~~~-----~~~~~~~l~~sen------~~~p~v~~a~~~~~~~~~~~g~~gsr~~~G~~~~~~lE~~ 78 (416)
T PRK13034 10 EEYDDEVFAAINKELE-----RQQDHLELIASEN------FTSPAVMEAQGSVLTNKYAEGYPGKRYYGGCEFVDEVEAL 78 (416)
T ss_pred hhhCHHHHHHHHHHHH-----HHhcCeeeccccc------CCCHHHHHHhcchhhcCCCCCCCCCcccCCChHHHHHHHH
Confidence 4556677888774322 1346676665541 35899999988875 32111 0 1111233567777
Q ss_pred ---HHHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc-HHHHhh--cCCEE--EEEeccC
Q 014769 92 ---AIADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY-EGIAQR--KQVEV--RHFDLLP 162 (419)
Q Consensus 92 ---~ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~-~~~~~~--~g~~~--~~~~~~~ 162 (419)
.+++++ | .+.. +++++|+.|+..++.+++++||+|+++..+|.+. ...+.. .+... ..+++++
T Consensus 79 ~~~~la~l~----g----~~~alv~~~SG~~A~~~~l~al~~~GD~Vl~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 150 (416)
T PRK13034 79 AIERAKQLF----G----CDYANVQPHSGSQANGAVYLALLKPGDTILGMSLSHGGHLTHGAKVSLSGKWYNAVQYGVDR 150 (416)
T ss_pred HHHHHHHHh----C----CCceEEecCCcHHHHHHHHHHhcCCCCEEEEcCccceeeeecCCcceeccceeeeEEccccc
Confidence 777766 2 2345 4568889999999999999999999999998762 222221 12111 2333332
Q ss_pred CCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 163 ERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 163 ~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
. .+.+|++++++.+.. ++++|++..+. +|...+ +.+|.++|+++|+++++|++|+...+..... ...+.
T Consensus 151 ~-~~~~d~~~le~~l~~~~~klVi~~~~~--~g~~~d---l~~l~~la~~~g~~livD~Aha~G~~~~g~~--~~~~~-- 220 (416)
T PRK13034 151 L-TGLIDYDEVEELAKEHKPKLIIAGFSA--YPRELD---FARFREIADEVGALLMVDMAHIAGLVAAGEH--PNPFP-- 220 (416)
T ss_pred c-cCCcCHHHHHHHHhhcCCeEEEECCCc--cccccC---HHHHHHHHHHcCCEEEEeCcccccCcccCCC--CCCCC--
Confidence 2 356899999888753 56666665554 466666 8888889999999999999998765532111 11111
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc--cCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
.-.++++|++|+++.+ ..|+++++++ ++...++.....+ .+..++...++...+.+.......+.++++
T Consensus 221 ~~Di~~~s~~K~l~g~--~GG~v~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l 291 (416)
T PRK13034 221 HAHVVTTTTHKTLRGP--RGGMILTNDE-------EIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQV 291 (416)
T ss_pred CceEEEEeCcccCCCC--CCeEEEECcH-------HHHHHHHhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 1348889999996333 2477777542 3444444432211 223333333333233321112234557889
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC------CCCCCCCeEEE
Q 014769 320 RESAEICYDGVKEIPCISCPNKP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG------IYVGLKNWLRI 392 (419)
Q Consensus 320 ~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g------~~~~~~~~~Ri 392 (419)
.++.+++++.|.++ |+.+. .+ ..+..+++.+.... .....+.+.|+++||.+.+. .....+..+|+
T Consensus 292 ~~~a~~l~~~L~~~-G~~~~-~~~~~t~i~~v~~~~~~-----~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~~~~~lR~ 364 (416)
T PRK13034 292 IANAQALAEVLKER-GYDLV-SGGTDNHLLLVDLRPKG-----LSGKDAEQALERAGITVNKNTVPGDTESPFVTSGIRI 364 (416)
T ss_pred HHHHHHHHHHHHHc-CCEec-cCCCCCcEEEEEcCCCC-----CCHHHHHHHHHhCCcEEeccCCCCCCcCCCCCCeeEe
Confidence 99999999999887 77733 22 34555666665321 13333434457789999752 11223567999
Q ss_pred Eee------cCHHHHHHHHHHHHHHHHH
Q 014769 393 AFC------AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 393 s~~------~~~~~l~~~l~~l~~~~~~ 414 (419)
++. .++++++++++.|++++.+
T Consensus 365 ~~~~~t~~~~~~~di~~l~~~l~~~~~~ 392 (416)
T PRK13034 365 GTPAGTTRGFGEAEFREIANWILDVLDD 392 (416)
T ss_pred CcHHHHhCCCCHHHHHHHHHHHHHHHhc
Confidence 972 3689999999999988763
No 253
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.88 E-value=1.2e-19 Score=173.54 Aligned_cols=352 Identities=14% Similarity=0.116 Sum_probs=210.2
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEE-ccc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYV-TLG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~-t~g 115 (419)
..+|+.+|||..|..... .-.-+|.+.+++.+++...... +. .....+.+..+++.+.+....+...+ .+++ +++
T Consensus 35 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~-~~-~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 111 (425)
T PRK09264 35 DEDGKEYIDFFAGAGALN-YGHNNPVLKQALIDYLQRDGIT-HG-LDMHTTAKREFLETFEETILKPRGLDYKVQFTGPT 111 (425)
T ss_pred eCCCCEeeecccchhhcc-CCCCCHHHHHHHHHHHHhcccc-cc-cccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCC
Confidence 446899999988854322 1236799999999988742110 11 01123445555555544211111122 5656 589
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCCc-ccChHHHHHhhcC
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERNW-EVDLDAVEALADK 179 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~ 179 (419)
+++|++.+++.... +| .+|+....+|++....+... +. .+..+|....... .-|++.+++.+..
T Consensus 112 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~ 191 (425)
T PRK09264 112 GTNAVEAALKLARKVTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLED 191 (425)
T ss_pred HHHHHHHHHHHHHHhcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHh
Confidence 99999999988643 23 67899999999865433222 10 1222222110000 0256677777642
Q ss_pred -----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 180 -----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 180 -----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
+..+.+|+.| ....|. +.|.+++++|.++|++||+++|+||++.++...|..+ ....++..+.++ +++|
T Consensus 192 ~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-~~~~~~v~PDi~---t~~K 267 (425)
T PRK09264 192 SSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFF-SFERAGITPDIV---TLSK 267 (425)
T ss_pred ccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHH-HHhhcCCCCCEE---Eecc
Confidence 1244566666 555676 5799999999999999999999999999875555322 122222222333 6789
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHHHh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
.++..|+++|++++++ ++ ..+... ...+++.++++..++.++++. ...+ ...++++++.+.+.+.|
T Consensus 268 ~l~~~G~pigav~~~~--------~i-~~~~~~~~~~T~~gnp~~~aaa~a~l~~~~~~~---~l~~~~~~~g~~l~~~l 335 (425)
T PRK09264 268 SISGYGLPMALVLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEEYWSDD---AFEKEVKAKGELVRERL 335 (425)
T ss_pred ccCCCccceEEEEEch--------hh-hccCCCccCCCCCCCHHHHHHHHHHHHHHHhhh---HHHHHHHHHHHHHHHHH
Confidence 9766699999999975 23 222221 222455666666666566632 1111 23344444445554444
Q ss_pred hc----CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769 331 KE----IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG 404 (419)
Q Consensus 331 ~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~ 404 (419)
++ .|.+. ......|++.++.++.. .....+...+ .++||.+.++..+ ...+|+++. .++++++++
T Consensus 336 ~~l~~~~~~~~-~~vrg~Gl~~~i~l~~~-----~~~~~l~~~~-~~~Gv~~~~~~~~--~~~lr~~p~l~~t~~ei~~~ 406 (425)
T PRK09264 336 EEIAAKYPGLG-AEVRGRGMMQGIDFGDG-----ELAGKIAAEA-FENGLIIETSGPE--DEVVKLLPPLTIDEEELEEG 406 (425)
T ss_pred HHHHHhCCCce-ecceecccEEEEEecCh-----HHHHHHHHHH-HHCCCEEeccCCC--CCEEEEeCCCCCCHHHHHHH
Confidence 33 33221 22345688888888632 1234555555 6679999875433 367888874 689999999
Q ss_pred HHHHHHHHHHHhc
Q 014769 405 LGRMKAFCQRHTK 417 (419)
Q Consensus 405 l~~l~~~~~~~~~ 417 (419)
+++|.+++++..+
T Consensus 407 ~~~l~~~l~~~~~ 419 (425)
T PRK09264 407 LDILEEAVAEVLA 419 (425)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999987644
No 254
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.88 E-value=9.6e-20 Score=173.29 Aligned_cols=352 Identities=13% Similarity=0.066 Sum_probs=206.7
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEE-ccc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYV-TLG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~-t~g 115 (419)
..+|+.+|||..|.-+.. .-.-+|.+.+++.+++..... ........+.+..+++.+.+....+.. .+.+++ +++
T Consensus 31 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~--~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~s 107 (412)
T TIGR02407 31 DEDGKEYIDFFAGAGALN-YGHNNPKLKQALIDYLADDGI--IHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPT 107 (412)
T ss_pred eCCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhccc--eeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCC
Confidence 446889999988854322 123689999999999874211 111111234555566665442110111 124655 589
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCCc-ccChHHHHHhhcC
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERNW-EVDLDAVEALADK 179 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~~-~~~~~~l~~~~~~ 179 (419)
+++|++.+++.... +| .+|+....+|++....+... +. .+..+|....... .-+++.+++.+..
T Consensus 108 GseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~ 187 (412)
T TIGR02407 108 GTNAVESALKLARKVTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLED 187 (412)
T ss_pred chHHHHHHHHHHhhhcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHh
Confidence 99999999988653 23 67999999999875443322 11 1111221100000 0135667776642
Q ss_pred -----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 180 -----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 180 -----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
+..+.+++.| +++.|. ..|.+++++|.++|+++|+++|+||++.++...|..+. ...++..+.++ +++|
T Consensus 188 ~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a-~~~~~v~PDi~---~~~K 263 (412)
T TIGR02407 188 SSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFS-FEPAGIEPDIV---CLSK 263 (412)
T ss_pred ccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHH-hcccCCCCCEE---Eech
Confidence 1234455566 778888 68999999999999999999999999997755554321 11122222223 5789
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcc-cchHHHHHHHHHH-HHHHHHHHHH
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTL-RESAEICYDG 329 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~-~~~~~~l~~~ 329 (419)
.++..|+|+|++++++ ++ +.+... ...+++.++++..++.+.++. .....+.++.+.+ ...++.+.+.
T Consensus 264 ~lg~~G~pigav~~~~--------~~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~i~~~~l~~~~~~~g~~l~~~l~~l 334 (412)
T TIGR02407 264 SISGYGLPLALTLIKP--------EL-DVWKPGEHNGTFRGNNLAFVTATAALEYYWSDDAFEKAVQRKSEIIQERLDRI 334 (412)
T ss_pred hccCCccceeEEEEch--------hh-hccCCCccCCCCCccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 9543399999999975 22 322211 223456677765555555552 2222222222111 1122222222
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGR 407 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~ 407 (419)
.+.++.+. ...+..|+++|+.++... ....+...+ .++||.+.+...+ .+.+|+++ ..++++++++++.
T Consensus 335 ~~~~~~~~-~~vrg~Gl~~~l~l~~~~-----~~~~~~~~~-~~~Gv~v~~~~~~--~~~lr~~p~l~~t~~~i~~~~~~ 405 (412)
T TIGR02407 335 VAEYPELI-KQVRGRGLMQGIECGDGD-----LAGKIAKAA-FENGLIIETSGPN--DEVIKLLPPLTIDEETLQQGLDI 405 (412)
T ss_pred HhhCCCce-EeeecceeEEEEEecChH-----HHHHHHHHH-HHCCCEEeccCCC--CCEEEEECCCCCCHHHHHHHHHH
Confidence 22344332 334667899999996421 134555555 5679999875322 46799998 4689999999999
Q ss_pred HHHHHHH
Q 014769 408 MKAFCQR 414 (419)
Q Consensus 408 l~~~~~~ 414 (419)
|++++.+
T Consensus 406 l~~~l~~ 412 (412)
T TIGR02407 406 LEQAVEE 412 (412)
T ss_pred HHHHHhC
Confidence 9998863
No 255
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.88 E-value=3.2e-19 Score=169.04 Aligned_cols=309 Identities=18% Similarity=0.164 Sum_probs=204.4
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP 139 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p 139 (419)
.+.-.+++.+.+..+. |....+..++|+++++++. . ++.++++|+++|+..++.++ .++||+|+++.|
T Consensus 9 ~~~~~~~v~~~~~~~~---~~~g~~~~~le~~la~~~g------~--~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~ 77 (380)
T TIGR03588 9 DQDDIDAVVEVLKSDF---LTQGPTVPAFEEALAEYVG------A--KYAVAFNSATSALHIACLALGVGPGDRVWTTPI 77 (380)
T ss_pred CHHHHHHHHHHHhcCC---ccCChhHHHHHHHHHHHHC------C--CeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCc
Confidence 3445677778776643 3223457899999999983 2 35666778999999999998 789999999999
Q ss_pred CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (419)
Q Consensus 140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (419)
+|..+...+...|++++.++++++ ++.+|++.+++.++ +++++|+++ |++|...+ +++|.++|+++|++
T Consensus 78 ~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~---~~~i~~l~~~~~~~ 150 (380)
T TIGR03588 78 TFVATANCALYCGAKVDFVDIDPD-TGNIDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVD---MQAIAALAKKHGLK 150 (380)
T ss_pred chHHHHHHHHHcCCEEEEEecCCC-cCCcCHHHHHHHhhcccCCCceEEEEe---CCCCccCC---HHHHHHHHHHcCCE
Confidence 999988888999999999998653 46799999999998 677877754 46888877 89999999999999
Q ss_pred EEEcccccccc-cCCCCCCCccc--cCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-
Q 014769 216 VVADEVYGHLT-FGSIPYTPMGL--FGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY- 289 (419)
Q Consensus 216 li~De~~~~~~-~~~~~~~~~~~--~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~- 289 (419)
+|+|++|+... +.+.. +.. ++ .+.+.|++ |.++. ...|++++.++ ++.+.++......
T Consensus 151 lI~D~a~a~g~~~~~~~---~g~~~~~----d~~~~S~~~~K~~~~--~~GG~v~~~~~-------~~~~~~~~~~~~g~ 214 (380)
T TIGR03588 151 IIEDASHALGAEYGGKP---VGNCRYA----DATVFSFHPVKIITT--AEGGAVTTNDE-------ELAERMRLLRSHGI 214 (380)
T ss_pred EEEECCCcccCccCCEe---CCCcccc----ceEEEecCCCCcccc--cCceEEEECCH-------HHHHHHHHHHHCCC
Confidence 99999998743 33322 222 22 26666776 77533 24677777552 4555554332110
Q ss_pred -------------------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 290 -------------------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 290 -------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
...+.+........| +.+++..++-+++.+++.+.|..++++.....+.+
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL-----~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~ 289 (380)
T TIGR03588 215 TKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQL-----KKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLG 289 (380)
T ss_pred CCCcccccccccCcceeeeeccccccCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCC
Confidence 000111111111112 23566677778888888899988876652322211
Q ss_pred ---eE-EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC-----------CC----------CCeEEEEee--cC
Q 014769 345 ---SM-VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV-----------GL----------KNWLRIAFC--AE 397 (419)
Q Consensus 345 ---g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~----------~~~~Ris~~--~~ 397 (419)
.+ ...+.++.. ...+..++...| +++||.+.+.... .. ...+++.+. .+
T Consensus 290 ~~~~~~~~~i~~~~~---~~~~r~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~~~~l~ 365 (380)
T TIGR03588 290 SKSAWHLYPILLDQE---FGCTRKEVFEAL-RAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380)
T ss_pred CEeEEEEEEEEECCc---CCCCHHHHHHHH-HHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCCCCCCC
Confidence 22 222334321 012456776666 7789987643211 00 256788773 58
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 398 PSALKDGLGRMKAFC 412 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~ 412 (419)
+++++..++.|++++
T Consensus 366 ~~dv~~i~~~l~~~~ 380 (380)
T TIGR03588 366 LEQQQRVVETLRKVL 380 (380)
T ss_pred HHHHHHHHHHHHHhC
Confidence 899999999998764
No 256
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.88 E-value=5.3e-20 Score=174.72 Aligned_cols=228 Identities=18% Similarity=0.115 Sum_probs=155.2
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~ 160 (419)
....|++.++++. +.+..+++++|++|+..++.+++++||.|++....|.+.... +...|++++.++
T Consensus 70 ~~~~Le~~lA~l~--------g~~~av~~sSG~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (436)
T PRK07812 70 TQDVVEQRIAALE--------GGVAALLLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVE- 140 (436)
T ss_pred hHHHHHHHHHHHh--------CCCeEEEEccHHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEEC-
Confidence 3568888888886 234578888889999999999999999999999888765432 344677666653
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
++ .|++.+++++++++++|++.+|+||+|.+.+ +++|.++|+++|+++|+|+++..... ..++ .++.
T Consensus 141 d~-----~d~e~l~~ai~~~tklV~ie~~sNp~G~v~D---l~~I~~la~~~gi~liVD~t~a~~~~----~~pl-~~Ga 207 (436)
T PRK07812 141 DP-----DDLDAWRAAVRPNTKAFFAETISNPQIDVLD---IPGVAEVAHEAGVPLIVDNTIATPYL----IRPL-EHGA 207 (436)
T ss_pred CC-----CCHHHHHHhCCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCccccc----CCch-hcCC
Confidence 11 2889999999888999999999999999999 89999999999999999999874221 1222 2333
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc-----------------------hhhHHHHHHhh--hccccCCchH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-----------------------KSGIIDSIKDC--LSIYSDIPTF 295 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-----------------------~~~~~~~l~~~--~~~~~~~~~~ 295 (419)
+ +++.|++|.++..|--+|.+++.+...-+. .+.+....+.. .......++.
T Consensus 208 D---ivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~ 284 (436)
T PRK07812 208 D---IVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLRDLGSAISPF 284 (436)
T ss_pred C---EEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhcchhHHHHHHHHHHHHhcCCCCCHH
Confidence 3 778999999888877777777643210000 00111111111 1222333443
Q ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
..+.+..-| +-+..+.++..++...+.+.|+++|.+..+..|
T Consensus 285 ~a~l~~rgl-----~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yP 326 (436)
T PRK07812 285 NAFLIAQGL-----ETLSLRIERHVANAQRVAEFLEARDEVASVNYA 326 (436)
T ss_pred HHHHHhcCc-----CcHHHHHHHHHHHHHHHHHHHHhCCCccEEECC
Confidence 333322222 336666777788888999999988776544444
No 257
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.88 E-value=2.1e-19 Score=169.93 Aligned_cols=340 Identities=11% Similarity=0.057 Sum_probs=213.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|.....-. ..+|.+.+++.+++..... .+ .....+.+..+++.+.+.. ..+.+++++++++
T Consensus 33 ~dG~~~lD~~sg~~~~~lG-h~~p~v~~a~~~q~~~~~~-~~--~~~~~~~~~~la~~l~~~~----~~~~v~f~~SGse 104 (395)
T PRK03715 33 HNGKRYLDFIQGWAVNCLG-HCNPGMVEALAAQAEKLIN-PS--PAFYNEPMAKLAGLLTQHS----CFDKVFFANSGAE 104 (395)
T ss_pred CCCCEEEECCcChhhccCC-CCCHHHHHHHHHHHHhccc-cc--ccccCHHHHHHHHHHhhcc----CCCEEEEeCCcHH
Confidence 4588999999874332212 2379999999999875322 11 1234578888899886532 2468999999999
Q ss_pred HHHHHHHHhcC------CC-CeEEeeCCCCCCcHHHHhhc-CCEEE---EEeccCCCC--cccChHHHHHhhcCCccEEE
Q 014769 119 AVEVILSVLAR------PG-ANVLLPRPGWPYYEGIAQRK-QVEVR---HFDLLPERN--WEVDLDAVEALADKNTAAMV 185 (419)
Q Consensus 119 al~~~~~~l~~------~g-d~vlv~~p~~~~~~~~~~~~-g~~~~---~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~ 185 (419)
|++.+++.+.. +| .+|+..+.+|++........ +.... +.+..+.-. .-.|++.+++.+.+++.+|+
T Consensus 105 A~e~Aik~ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi 184 (395)
T PRK03715 105 ANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVM 184 (395)
T ss_pred HHHHHHHHHHHHhhccCCCCcEEEEECCCcCCChHHHHhhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEE
Confidence 99999998752 23 67888999998764333222 22111 111111000 01367888888876555555
Q ss_pred EeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 186 IINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 186 i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
+...++..|.. .|.+++++|.++|+++|+++|+||++.++...|..+. ...++..+. + .+++|.++ .|+++|.+
T Consensus 185 ~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a-~~~~gv~PD-i--~t~gK~lg-~G~p~~av 259 (395)
T PRK03715 185 LEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFA-YELSGIEPD-I--MTLGKGIG-GGVPLAAL 259 (395)
T ss_pred EeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhh-HhhcCCCCc-e--eeehhhhh-CCcceEEE
Confidence 55446667775 4799999999999999999999999998655554321 112222222 2 37889965 57999999
Q ss_pred EeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCC
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI---PCISCPNK 341 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~ 341 (419)
++++ ++..........+++.++++..++.+.|+.... +...++++++.+++.+.|+++ .++.. .
T Consensus 260 ~~~~--------~i~~~~~~~~~~T~~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~--v 326 (395)
T PRK03715 260 LAKA--------EVAVFEAGDQGGTYNGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEG--E 326 (395)
T ss_pred EEcc--------ccccccCCCcCCCCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCe--E
Confidence 8865 232111111222445677777777777765321 234455666666666666542 12331 2
Q ss_pred CCceEEEEeecCcccccCCCCHHHHHHHHHHhc---CeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE---SVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~---gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
..-|.++-+.+... ....+. ..+.+. ||.+.+.. .+.+|+++ ..++++|+++++.|+++++++
T Consensus 327 rG~Glm~~i~l~~~------~~~~~~-~~~~~~~~~Gi~~~~~~----~~~lR~~p~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 327 RGEGLLRALLLGKD------IGPQIV-EKARDMQPDGLLLNAPR----PNLLRFMPALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred EcceeEEEEEecCc------hHHHHH-HHHHhccCCCEEEeecC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 24466666666431 122332 222444 99986432 36899998 468999999999999999875
No 258
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.87 E-value=3.8e-19 Score=170.59 Aligned_cols=355 Identities=16% Similarity=0.126 Sum_probs=210.7
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc-EEEcc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD-VYVTL 114 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~ 114 (419)
+...+|+.++||..|..... .-.-+|.+.+++.+++......... .-..+.+..+++.+.+..+....... +++++
T Consensus 33 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~ 109 (442)
T TIGR00709 33 VTDVEGKEYLDFLAGAGTLA-LGHNHPNMKQKILDYLQSGLPLHTL--DLTTPLKDAFIEALLNIIPKRKMDYKLQFPGP 109 (442)
T ss_pred EEeCCCCEEEEccccHhhhc-CCCCCHHHHHHHHHHHHhccCcccc--ccCcHHHHHHHHHHHHhCCCcCCCccEEEeCC
Confidence 33456899999988853321 1235789999999998764321111 01134555566666553321111124 56679
Q ss_pred cHHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCccc--------Ch-
Q 014769 115 GCKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEV--------DL- 170 (419)
Q Consensus 115 g~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~--------~~- 170 (419)
++++|++.+++.... .| .+|+....+|++....+..... .+..++.. ..... +.
T Consensus 110 sGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~ 187 (442)
T TIGR00709 110 SGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYP--HEYRCPFGIGGEAGSN 187 (442)
T ss_pred CHHHHHHHHHHHHHHhcCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCC--ccccccccCCchhHHH
Confidence 999999999987643 23 6799999999987544433211 11222211 11111 11
Q ss_pred ---HHHHHhhc-----CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 171 ---DAVEALAD-----KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 171 ---~~l~~~~~-----~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
+.+++.+. .+..+.++..| ++..| ..+|.++++++.++|++||+++|.||++.++.+.|..+ ....++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~gv 266 (442)
T TIGR00709 188 ASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMF-AFEHAGI 266 (442)
T ss_pred HHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchh-HHHHcCC
Confidence 11233332 12234444444 44444 56899999999999999999999999999987766432 2333333
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
.+.++ +++|.++. |+++|++++++ + .+.+... ...+++.+++++.++.++|+...++. ..+++
T Consensus 267 ~PDiv---~~gK~l~~-G~Pigav~~~~--------~-~~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~~~---l~~~~ 330 (442)
T TIGR00709 267 EPDFV---VMSKAVGG-GLPLAVLLIAP--------E-FDAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDN---LAQNA 330 (442)
T ss_pred CCcEE---EEcccccC-CcccEEEEEch--------H-HhccCCCcCCCCCCcCHHHHHHHHHHHHHHHhcC---HHHHH
Confidence 33334 37899765 89999999865 2 2222211 23456789999999988887533222 23345
Q ss_pred HHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-ccC----CC----CHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 320 RESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LED----IN----DDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 320 ~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~~----~~----~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
+++.+++.+.|++ .|.+. ....-|.+..+.+.... ... .. ....+...+ .++||++.+....
T Consensus 331 ~~~g~~l~~~L~~l~~~~~~v~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~~-- 405 (442)
T TIGR00709 331 QERGERITSFLDDMIKEHPCIG--NVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGAC-FENGLLLETGGRE-- 405 (442)
T ss_pred HHHHHHHHHHHHHHHHhCCCee--eeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHH-HHCCeEEeecCCC--
Confidence 5555555555543 33222 12334666666664211 000 00 022344444 5689998764321
Q ss_pred CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 387 KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+.+|+.+ ..++++++++++++++++.+..+
T Consensus 406 ~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 438 (442)
T TIGR00709 406 GEVFRLLCPITIDQEECEEGISRFKQAVEEALA 438 (442)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46889888 46999999999999999987754
No 259
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.87 E-value=6.6e-19 Score=166.79 Aligned_cols=339 Identities=13% Similarity=0.046 Sum_probs=220.8
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhcC-------
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR------- 129 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~------- 129 (419)
++.|.+.+.+...+..... .+.......++.+.+.+++.+.+|.+...+++.+ |+|+|++++.++.+...
T Consensus 52 ~~~p~~~~~~~~~l~~~~~-np~s~~~~~~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~ 130 (431)
T TIGR01788 52 WMEPEARKLMDETINKNMI-DKDEYPQTAEIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRME 130 (431)
T ss_pred CCCHHHHHHHHHHHhcCCC-CcccCccHHHHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHH
Confidence 4567788888888753322 2222233457777777777777764311134544 89999999998865431
Q ss_pred -CC-----CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 130 -PG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 130 -~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
.| ..|++..-.|+++...++..|+++..+++++ +++.+|++.|++++++++.+|+++..+|.||.+.| ++
T Consensus 131 ~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~~v~~i~~d~-~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idp---i~ 206 (431)
T TIGR01788 131 AAGKPTDKPNLVMGSNVQVCWEKFARYFDVELREVPMDP-GRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYED---VK 206 (431)
T ss_pred hcCCCCCCcEEEEcCcchHHHHHHHHHcCceeEEEecCC-CceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCC---HH
Confidence 12 3688889999999999998999999999865 34579999999999988999999999999999999 88
Q ss_pred HHHHHHHhC------CCeEEEccccccccc---CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769 204 EIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 204 ~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 274 (419)
+|.++|+++ |+++++|.+|+.+.. -+.....+... .-..+..|.+|+ +.....+|.+++++...
T Consensus 207 ~I~~i~~~~~~~~~~~~~~HvDaaq~g~~~p~~~~~~~~~~~~~---~~DSis~s~HK~-~~~P~g~G~l~~r~~~~--- 279 (431)
T TIGR01788 207 ALNDALDEYNAKTGWDIPIHVDAASGGFIAPFVYPDLEWDFRLP---RVKSINVSGHKY-GLVYPGVGWVIWRDEEA--- 279 (431)
T ss_pred HHHHHHHHHHhhhCCCceEEEecccHHHHHHHhCCCchhhcCCC---CceEEEECchhc-cCCCCCcEEEEEeChHH---
Confidence 999999999 999999999996431 12222222211 112455589998 44445599999876321
Q ss_pred hhhHHHHHHh---hh-----ccccCCchHH--HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CC
Q 014769 275 KSGIIDSIKD---CL-----SIYSDIPTFI--QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-PE 343 (419)
Q Consensus 275 ~~~~~~~l~~---~~-----~~~~~~~~~~--~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~ 343 (419)
+.+.+.. +. +.+...+... ..+....|.......+++..++..++.+++.+.|+++|+++++.+ |.
T Consensus 280 ---l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~ 356 (431)
T TIGR01788 280 ---LPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSG 356 (431)
T ss_pred ---cchhheecccccCCCCCCcceecCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCC
Confidence 1121111 00 0011111111 111222223333577888899999999999999999888885533 44
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC---CCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV---GLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~---~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+. +.++++.....+ .+..++.+.| .++|+.+...... ....++|+++ ..+++.++.+++.|+.++.++
T Consensus 357 ~~i-V~Fr~~~~~~~~-~~~~~l~~~L-~~~G~~~~~~~~p~~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 357 IPL-VAFKLKDDADPG-YTLYDLSHRL-RERGWIVPAYTLPKNAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred ceE-EEEEeCCCCCCC-cCHHHHHHHH-HHCCCcccCCCCCCccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 443 344554211001 1345666665 6679875332221 1234689998 467899999999999988764
No 260
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=4.9e-19 Score=170.79 Aligned_cols=339 Identities=11% Similarity=0.049 Sum_probs=211.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC---CCC---CHHH----HHHHHHHHHhhCCCCCCCCcE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT---NSG---IPPA----RRAIADYLSRDLPYKLSADDV 110 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g---~~~l----r~~ia~~l~~~~~~~~~~~~i 110 (419)
..+.|+|--... ..+|.+++++...+.+....+++. ..| ...+ |+.+++++ +.+++++
T Consensus 33 ~~~~l~l~~sen------~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf------~a~~~~~ 100 (452)
T PTZ00094 33 QIEGLELIASEN------FTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAF------GLDPEEW 100 (452)
T ss_pred HHcCeeEecccc------cCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHh------CCCcccc
Confidence 456788877652 357888888887775422111221 112 2223 34556665 4566777
Q ss_pred EEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh----------cCCEEEEEeccCCCCcccChHHHHHhh
Q 014769 111 YVT---LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR----------KQVEVRHFDLLPERNWEVDLDAVEALA 177 (419)
Q Consensus 111 ~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~----------~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (419)
.++ +|+++++..++.++.++||+|++....|.++...... .++++..++++. ++.+|++.+++.+
T Consensus 101 ~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~~--~g~id~~~L~~~l 178 (452)
T PTZ00094 101 GVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVNE--KGLIDYDKLEELA 178 (452)
T ss_pred eeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccCC--CCCcCHHHHHHHH
Confidence 666 7899999999999999999999988777664332211 112333444443 3579999999998
Q ss_pred cC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCC
Q 014769 178 DK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 178 ~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
+. +++.+++. ++.+|...| +++|.++|+++|+++++|++|+.......... ++. +..++++|++|+++
T Consensus 179 ~~~~~~lvi~~--~s~~g~~~d---i~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-----~~D~l~~S~hK~l~ 248 (452)
T PTZ00094 179 KAFRPKLIIAG--ASAYPRDID---YKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-----YADVVTTTTHKSLR 248 (452)
T ss_pred HHhCCCEEEEe--CCCCCCccC---HHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-----CCcEEEcCCccCCC
Confidence 54 55665543 345999999 88888999999999999999998655432211 111 22388899999853
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
|.+.|++++++. .. +.+...++... .+.++++.....++..+++.......++..+++.++.+++.+.|.+.
T Consensus 249 --GP~Gg~l~~~~~--~~--~~l~~~~~~~~~p~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i~~l~~~l~~~L~~~ 322 (452)
T PTZ00094 249 --GPRSGLIFYRKK--VK--PDIENKINEAVFPGLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQVLKNAKALAAALEKR 322 (452)
T ss_pred --CCCceEEEEecc--cc--hHHHHhhccccCCCCCCCchHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHhC
Confidence 344588887542 11 01222222111 11235566666666667765433456677888999999999999876
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee-cCCCCC----CCCeEEEEee--c----CHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT-PGIYVG----LKNWLRIAFC--A----EPSALK 402 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~----~~~~~Ris~~--~----~~~~l~ 402 (419)
|+.+..........++.+.... .+..++ ..+|+++||.+. ++..+. .++++|+++. + +++|++
T Consensus 323 -g~~v~~~~~~~~~~~v~~~~~~----~~~~~~-~~~L~~~gI~vs~~~~p~~~~~~~~~~vRis~~~~tt~g~~~~di~ 396 (452)
T PTZ00094 323 -GYDLVTGGTDNHLVLVDLRPFG----ITGSKM-EKLLDAVNISVNKNTIPGDKSALNPSGVRLGTPALTTRGAKEKDFK 396 (452)
T ss_pred -CcEEecCCCCCceEeecCCcCC----CCHHHH-HHHHHHCCcEEecccCCCCCcCCCCCeEEECCHHHHhCCCCHHHHH
Confidence 6663321111223444443211 133444 455588899994 443332 1478999983 3 489999
Q ss_pred HHHHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQRH 415 (419)
Q Consensus 403 ~~l~~l~~~~~~~ 415 (419)
++++.|.++++..
T Consensus 397 ~l~~~l~~~~~~~ 409 (452)
T PTZ00094 397 FVADFLDRAVKLA 409 (452)
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998753
No 261
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.87 E-value=3.3e-19 Score=166.03 Aligned_cols=280 Identities=20% Similarity=0.218 Sum_probs=183.9
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEecc
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLL 161 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~ 161 (419)
...+++.|++.. +.+.++++++|+.|+..++.+++++||.|+++...|.+....+ ...|+++.+++.
T Consensus 57 ~~~le~~la~Le--------~g~~a~~~~SGmaAi~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~- 127 (386)
T PF01053_consen 57 VRALEQRLAALE--------GGEDALLFSSGMAAISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDP- 127 (386)
T ss_dssp HHHHHHHHHHHH--------T-SEEEEESSHHHHHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEEST-
T ss_pred HHHHHHHHHHhh--------cccceeeccchHHHHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCc-
Confidence 457788887775 2478999999999999999999999999999999998765444 446888887743
Q ss_pred CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC-CeEEEcccccccccCCCCCCCccccCC
Q 014769 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
-|++++++++++++++|++..|.||+..+.+ +++|+++|+++| +++++|..+..... ..++ .++.
T Consensus 128 ------~d~~~l~~~l~~~t~~v~~EspsNP~l~v~D---l~~i~~~a~~~g~~~~vVDnT~atp~~----~~pL-~~Ga 193 (386)
T PF01053_consen 128 ------TDLEALEAALRPNTKLVFLESPSNPTLEVPD---LEAIAKLAKEHGDILVVVDNTFATPYN----QNPL-ELGA 193 (386)
T ss_dssp ------TSHHHHHHHHCTTEEEEEEESSBTTTTB------HHHHHHHHHHTTT-EEEEECTTTHTTT----C-GG-GGT-
T ss_pred ------hhHHHHHhhccccceEEEEEcCCCccccccc---HHHHHHHHHHhCCceEEeeccccceee----eccC-cCCc
Confidence 3789999999999999999999999988888 999999999998 99999999976321 1122 3333
Q ss_pred CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 318 (419)
+ +++.|++|.++..|-- .|.+++++. .++.+.++.... .....++...+.+..-++. +.-+.++
T Consensus 194 D---ivv~S~TKyl~Ghsdv~~G~vv~~~~------~~~~~~l~~~~~~~G~~~~p~da~ll~rgl~T-----l~~R~~~ 259 (386)
T PF01053_consen 194 D---IVVHSATKYLSGHSDVMGGAVVVNGS------SELYDRLREFRRLLGATLSPFDAWLLLRGLRT-----LPLRMER 259 (386)
T ss_dssp S---EEEEETTTTTTTSSSE-EEEEEESSH------HHHHHHHHHHHHHHT-B--HHHHHHHHHHHTT-----HHHHHHH
T ss_pred e---EEEeeccccccCCcceeeEEEEECch------hhhhhhhcchhhhcCccchHHHHHHHhcCCCc-----HHHHHHH
Confidence 3 8899999997655533 566665441 146666665543 3344455554444444443 6666677
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC
Q 014769 319 LRESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~ 382 (419)
..++...+.+.|+++|.+..|..| .+|..+.+.++. ..+.+.+++..-.+. ..|.
T Consensus 260 ~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~--------~~~~~~~f~~~l~l~-~~~~ 330 (386)
T PF01053_consen 260 QNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKG--------GEEAARRFLDALKLF-SIAP 330 (386)
T ss_dssp HHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESS--------HHHHHHHHHHH-SSS-EESS
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEecc--------chhhhHhHHhhhhhH-hhhh
Confidence 788888999999987765433333 233355667763 222233333333332 1222
Q ss_pred CCCC---------------------------CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 383 YVGL---------------------------KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 383 ~~~~---------------------------~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.+|. ++.+|+|+|. |+.+++++.|+++++
T Consensus 331 SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGl--Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 331 SLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGL--EDPDDLIADLEQALE 386 (386)
T ss_dssp S-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--S--S-HHHHHHHHHHHHH
T ss_pred hcCCcccccccccchhhccCChhhhhccCCCCCeeEEEecc--CCHHHHHHHHHHhcC
Confidence 2211 3679999997 456777777777764
No 262
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.87 E-value=2.6e-18 Score=164.05 Aligned_cols=332 Identities=15% Similarity=0.144 Sum_probs=204.0
Q ss_pred eeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 44 VVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
+..|++|.|......+ .++.-.+++.+.+..... .+++ ...++++++++++ + .+++++++|+++++..
T Consensus 25 ~~~~~~~~~~ip~~~~~~~~~~~~a~~~~~~~~~~-~~G~--~~~~fe~~lA~~~------g--~~~~v~~~sGt~al~~ 93 (438)
T PRK15407 25 PKPFVPGKSPIPPSGKVIDAKELQNLVDASLDFWL-TTGR--FNDAFEKKLAEFL------G--VRYALLVNSGSSANLL 93 (438)
T ss_pred cccccCCCCCCCcCccCCCHHHHHHHHHHHHhCcc-cCCh--hHHHHHHHHHHHh------C--CCeEEEECCHHHHHHH
Confidence 3447888775432211 223333444455544322 2333 2579999999998 2 3479999999999999
Q ss_pred HHHHh---------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 123 ILSVL---------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 123 ~~~~l---------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
++.++ .++||+|+++.++|..+...+...|..++.+++++ ..+.+|++.+++++++++++|+++++ +
T Consensus 94 aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~v~~~G~~pv~vdvd~-~~~~id~~~le~~i~~~tkaVi~~~~---~ 169 (438)
T PRK15407 94 AFSALTSPKLGDRALKPGDEVITVAAGFPTTVNPIIQNGLVPVFVDVEL-PTYNIDASLLEAAVSPKTKAIMIAHT---L 169 (438)
T ss_pred HHHHHhhccccccCCCCCCEEEECCCCcHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHHcCcCCeEEEEeCC---C
Confidence 98876 36899999999999999888999999999998764 35789999999999888999888875 4
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI 272 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~ 272 (419)
|...+ +++|.++|+++|+++|+|++|+... +.|.. +..+++ +.+.||+....+.....|+++++++
T Consensus 170 G~p~d---l~~I~~la~~~gi~vIeDaa~a~G~~~~g~~---~G~~gd----~~~fSf~~~k~~~~geGG~l~t~d~--- 236 (438)
T PRK15407 170 GNPFD---LAAVKAFCDKHNLWLIEDNCDALGSTYDGRM---TGTFGD----IATLSFYPAHHITMGEGGAVFTNDP--- 236 (438)
T ss_pred CChhh---HHHHHHHHHHCCCEEEEECccchhhhcCCee---eeccCc----eEEEeCCCCCCccccCceEEEECCH---
Confidence 44444 8999999999999999999998753 23321 233332 4555665332233223589988763
Q ss_pred cchhhHHHHHHhhhcccc------------------------------------CCc-hHHHHHHHHHHcccchHHHHHH
Q 014769 273 FQKSGIIDSIKDCLSIYS------------------------------------DIP-TFIQGAIPQILEKTKEDFFCKL 315 (419)
Q Consensus 273 ~~~~~~~~~l~~~~~~~~------------------------------------~~~-~~~~~a~~~~l~~~~~~~~~~~ 315 (419)
++.+.++...+... +.| .+....++-.+.+ -+.+++.
T Consensus 237 ----~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~q--L~~l~~~ 310 (438)
T PRK15407 237 ----LLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQ--LEKLPGF 310 (438)
T ss_pred ----HHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCccHHHHHHHHHH--HHHHHHH
Confidence 34444443322100 000 0111111111111 2446666
Q ss_pred HHHHHHHHHHHHHHhhcCCC-CCCCCCCCc---eEEE-EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC-------
Q 014769 316 IDTLRESAEICYDGVKEIPC-ISCPNKPEG---SMVT-MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY------- 383 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~~~-~~~~~~p~~---g~~~-~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~------- 383 (419)
.++-+++.+.+.+.|..+++ +.....+.+ .++. .+.++... ..+..++...| +++||.+.+...
T Consensus 311 ~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~---~~~Rd~l~~~L-~~~GI~~~~~~~~~~~~~p 386 (438)
T PRK15407 311 IEARKANFAYLKEGLASLEDFLILPEATPNSDPSWFGFPITVKEDA---GFTRVELVKYL-EENKIGTRLLFAGNLTRQP 386 (438)
T ss_pred HHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEEEEEEEEECCcC---CCCHHHHHHHH-HHCCCCccccCCCccccCh
Confidence 66667777788888877654 321112222 2222 23333210 11356777666 667997653221
Q ss_pred -C-----C-C----------CCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 384 -V-----G-L----------KNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 384 -~-----~-~----------~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
| . . ...+-|.+ ..++++++..++.|+++++
T Consensus 387 ~~~~~~~~~~~~~P~ae~~~~~~l~LP~~~~l~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 387 YFKGVKYRVVGELTNTDRIMNDTFWIGVYPGLTEEMLDYVIEKIEEFFG 435 (438)
T ss_pred hhhhcCCCCCCCChHHHHHHhCeEEecCCCCCCHHHHHHHHHHHHHHHh
Confidence 0 0 0 12344444 3478999999999998875
No 263
>PRK06541 hypothetical protein; Provisional
Probab=99.86 E-value=1.3e-18 Score=167.08 Aligned_cols=359 Identities=14% Similarity=0.094 Sum_probs=218.7
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-... .-.-+|.+.+++.+++..... +.......+.+..+++.+.+..+ ...+.++++++
T Consensus 46 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~s 120 (460)
T PRK06541 46 IWDDRGKRYLDGLAGLFVVQ-VGHGRAELAEAAAKQAGTLAF--FPLWSYAHPPAIELAERLAALAP--GDLNRVFFTTG 120 (460)
T ss_pred EEeCCCCEEEECCccHHhcc-CCCCCHHHHHHHHHHHhhCcC--ccccccCCHHHHHHHHHHHHhCC--CCcCEEEEcCC
Confidence 44456999999988843321 123579999999999876421 11111122444455555544222 22468999999
Q ss_pred HHHHHHHHHHHhcC-------C-CCeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCC---cccC--
Q 014769 116 CKQAVEVILSVLAR-------P-GANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERN---WEVD-- 169 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~---~~~~-- 169 (419)
+++|++.+++.... + ..+|+....+|++....+... +. .+..++...... +.-+
T Consensus 121 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 200 (460)
T PRK06541 121 GSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPE 200 (460)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccccCCCCCCcEEeCCCccccccccCCCHH
Confidence 99999999887542 1 267899999998865433322 11 111122110000 1111
Q ss_pred ------hHHHHHhhc---CCccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 170 ------LDAVEALAD---KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 170 ------~~~l~~~~~---~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
++.+++.+. .+..+.+++.| ++++|.+. |.+++++|.++|+++|+++|+||++.++...|..+ ....+
T Consensus 201 ~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tGfGR~G~~~-a~~~~ 279 (460)
T PRK06541 201 AFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRLGEMF-GCERF 279 (460)
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchhh-hhhhc
Confidence 355666664 24566777888 78889875 59999999999999999999999998764444322 12222
Q ss_pred CCCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
+..+.++ +++|.++ .|+ ++|++++++ ++++.+... ...+++.++++..++.+.++....+
T Consensus 280 gv~PDiv---t~gK~l~-~G~~pigav~~~~--------~i~~~~~~~~~~~~~~~T~~gnp~~~aaala~l~~l~~~-- 345 (460)
T PRK06541 280 GYVPDII---TCAKGIT-SGYSPLGAMIASD--------RLFEPFLDGPTMFLHGYTFGGHPVSAAVALANLDIFERE-- 345 (460)
T ss_pred CCCCCEE---Eeccccc-CCccceeEEEEcH--------HHHHHhhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhc--
Confidence 2222233 5899965 786 999999975 566665422 1225566777777777777653222
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccc--cCCCC------H-HHHHHHHHHhcCeEeecCC
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLL--EDIND------D-IEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~--~~~~~------~-~~~~~~ll~~~gv~v~~g~ 382 (419)
...++++++.+++.+.|+++....++ .....|.++-+.+..... ..... . ..+...+ .++||++.+..
T Consensus 346 -~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gi~~~~~~ 423 (460)
T PRK06541 346 -GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPAL-FEAGLYCRADD 423 (460)
T ss_pred -cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccccCCcchhhhhhHHHHHHHHH-HhCCeEEEecC
Confidence 34566777777777777765222211 122345565666632100 00000 0 1334444 56799998731
Q ss_pred CCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769 383 YVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 383 ~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
. ....+||++. .++++|++++++|.+++++.-.|
T Consensus 424 -~-g~~~lrl~Ppl~~t~~~id~~~~~l~~~l~~~~~~ 459 (460)
T PRK06541 424 -R-GDPVVQLAPPLISGQEEFDEIEQILRSVLTEAWAR 459 (460)
T ss_pred -C-CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 1 1367999995 79999999999999999876443
No 264
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.86 E-value=1.9e-20 Score=170.70 Aligned_cols=223 Identities=16% Similarity=0.161 Sum_probs=154.2
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (419)
+.++++.+++++ +. .+.+++++|+++++..++.+++++||+|+++.|+|.++...+...|..+++++...+.+
T Consensus 61 i~~~~~~~A~~~------ga-~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~~~~g~~~~~v~~~~~~~ 133 (294)
T cd00615 61 IKEAQELAARAF------GA-KHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPY 133 (294)
T ss_pred HHHHHHHHHHHh------CC-CCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHHHHCCCEEEEecCccCcc
Confidence 578889999987 32 23455599999999999999999999999999999998888888999988887654433
Q ss_pred ----cccChHHHHHhhcC--CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCcccc
Q 014769 166 ----WEVDLDAVEALADK--NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLF 238 (419)
Q Consensus 166 ----~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~ 238 (419)
..+|++.+++++++ +++++++++| |++|.+++ +++|+++|+++|+++|+|++|+. +.+.+..+.....
T Consensus 134 ~~~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~d---l~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~- 208 (294)
T cd00615 134 YGIAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYN---LRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAM- 208 (294)
T ss_pred cCcCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecC---HHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhh-
Confidence 36899999998863 5788999998 78999998 89999999999999999999974 3343322212111
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKL 315 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 315 (419)
.+..+++.|++|+ ++|++.|+++ .++. .. ...++.... ..+++++.+...++..++.... ..-.+.
T Consensus 209 --~~~div~~S~hK~--l~g~~~~~~l~~~~~--~~----~~~~~~~~~~~~~ttsps~~~~asl~~a~~~~~-~~g~~~ 277 (294)
T cd00615 209 --AGADIVVQSTHKT--LPALTQGSMIHVKGD--LV----NPDRVNEALNLHQSTSPSYLILASLDVARAMMA-LEGKEL 277 (294)
T ss_pred --cCCcEEEEchhcc--cchHhHHHHHHhCCC--cC----CHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHH-HHhHHH
Confidence 2345899999997 5777765544 4332 11 112222221 1234566666555555554321 122334
Q ss_pred HHHHHHHHHHHHHHhh
Q 014769 316 IDTLRESAEICYDGVK 331 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~ 331 (419)
.+++.++.+.+++.|.
T Consensus 278 ~~~~~~~~~~~r~~l~ 293 (294)
T cd00615 278 VEELIELALYARQEIN 293 (294)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4556666666666553
No 265
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.86 E-value=1.2e-18 Score=158.90 Aligned_cols=351 Identities=13% Similarity=0.069 Sum_probs=227.2
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.-+|+.+|||..++-... .-..+|.|.+++.+++.++. .|+.+ .+++-.+|+.+.+..+ ..+.|-+++++|
T Consensus 49 DvDGn~YIDy~~~~Gp~i-lGH~~p~V~~Av~~~l~~G~--~fg~P---te~Ei~~Aell~~~~p---~~e~vrfvnSGT 119 (432)
T COG0001 49 DVDGNEYIDYVLGWGPLI-LGHAHPAVVEAVQEQLERGL--SFGAP---TELEVELAELLIERVP---SIEKVRFVNSGT 119 (432)
T ss_pred eCCCCEeeehhccCcccc-cCCCCHHHHHHHHHHHHhcC--CCCCC---CHHHHHHHHHHHHhcC---cccEEEEecchh
Confidence 446899999999964322 12367889999999998875 46654 3677777777766433 348999999999
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHH-hhcCCEEEEE--ecc---CCCC--c-----ccChHHHHHhhcCC--
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIA-QRKQVEVRHF--DLL---PERN--W-----EVDLDAVEALADKN-- 180 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~--~~~---~~~~--~-----~~~~~~l~~~~~~~-- 180 (419)
||...+++.... .-|+|+..+-||+++.+.+ ...|..+-.. |-. +... . =-|++.+++++++.
T Consensus 120 EAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~~~~~~g~ 199 (432)
T COG0001 120 EATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEEAFEEYGD 199 (432)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCCCHHHHHHHHHHcCC
Confidence 999999887643 3389999999999875544 3333211111 100 0000 0 01788898888764
Q ss_pred ccEEEEeCC--CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
..+.+|+.| .|-.-+...+++++.|.++|+++|+++|.||+..+|...-.+......+.+| +.++.|. ...|
T Consensus 200 ~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq~~~gi~PD-----lttlGKi-IGGG 273 (432)
T COG0001 200 DIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQGYYGVEPD-----LTTLGKI-IGGG 273 (432)
T ss_pred cEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccccccCcCcc-----hhhhhhh-hcCC
Confidence 456677877 5644446788899999999999999999999999877653333333344433 3478899 6789
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhhh----ccccCCchHHHHHHHHHHcccch--HHHHHHHHHHHHHHHHHHHHhhc
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL----SIYSDIPTFIQGAIPQILEKTKE--DFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
+++|.+.++. ++++.+.... .-+.+.|+++..|..+.++.... ..++++.+.-.+.++-+.+.+.+
T Consensus 274 lP~ga~gGr~--------eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~~~ 345 (432)
T COG0001 274 LPIGAFGGRA--------EIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAAER 345 (432)
T ss_pred cceeeeccHH--------HHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999876 6777665432 22456788888777777765332 13444444444444444444444
Q ss_pred CCCCCCCCCCCceEEEEeecCc--cccc-----CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769 333 IPCISCPNKPEGSMVTMVKLNP--WLLE-----DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL 405 (419)
Q Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~--~~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l 405 (419)
. ++.....-.+++|-+.-.+. .+++ +...-..+...+| ++||++.|+.+ ...=+|...++++|++.+
T Consensus 346 ~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l-~~GV~l~ps~~----ea~flS~ahte~di~~~~ 419 (432)
T COG0001 346 H-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLL-NRGVYLAPSQF----EAGFLSTAHTEEDIDRTL 419 (432)
T ss_pred h-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHH-hCCcccCCccc----cceeeecccCHHHHHHHH
Confidence 4 55533344455554432221 1110 0001234555554 46999988642 223477788999999999
Q ss_pred HHHHHHHHHHhc
Q 014769 406 GRMKAFCQRHTK 417 (419)
Q Consensus 406 ~~l~~~~~~~~~ 417 (419)
+.+.+++++...
T Consensus 420 ~a~~~~~~~~~~ 431 (432)
T COG0001 420 EAADEAFKELAG 431 (432)
T ss_pred HHHHHHHHHhhc
Confidence 999999987654
No 266
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.86 E-value=6.8e-19 Score=164.21 Aligned_cols=219 Identities=15% Similarity=0.124 Sum_probs=159.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~ 160 (419)
....|++.++++- ..+..++++++++|+..++.+++++||.|++++..|.+.... ++..|+++.+++.
T Consensus 63 t~~~le~~la~LE--------g~~~a~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~ 134 (395)
T PRK08114 63 THFSLQEAMCELE--------GGAGCALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDP 134 (395)
T ss_pred hHHHHHHHHHHHh--------CCCeEEEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECC
Confidence 4567888888864 346788888899999999999999999999999999766544 4667888888753
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC--CeEEEcccccccccCCCCCCCcccc
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
.|.+.+++++++++++|++.+|+||+|.+.| +++|+++|++++ +++++|.+++.... .....+
T Consensus 135 -------~d~~~l~~~l~~~TrlV~~EtpsNp~~~v~D---I~~Ia~ia~~~g~g~~lvVDnT~a~p~~-----~~pl~~ 199 (395)
T PRK08114 135 -------LIGADIAKLIQPNTKVVFLESPGSITMEVHD---VPAIVAAVRSVNPDAVIMIDNTWAAGVL-----FKALDF 199 (395)
T ss_pred -------CCHHHHHHhcCCCceEEEEECCCCCCCEeec---HHHHHHHHHHhCCCCEEEEECCCccccc-----cCHHHc
Confidence 3678899999989999999999999999999 999999999984 99999999975221 112234
Q ss_pred CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
+.+ +++.|.+|.++.+| .-.|.++.+. +..+.++... ......++...+.+..-|+ -+.-+.
T Consensus 200 GaD---ivv~S~tKyl~Ghsdv~~G~v~~~~--------~~~~~l~~~~~~~G~~~~p~~a~l~~rgl~-----TL~lR~ 263 (395)
T PRK08114 200 GID---ISIQAGTKYLVGHSDAMIGTAVANA--------RCWEQLRENSYLMGQMVDADTAYMTSRGLR-----TLGVRL 263 (395)
T ss_pred CCc---EEEEcCcccccCCCcceeEEEEcCH--------HHHHHHHHHHHhccCCCCHHHHHHHHcCCC-----cHHHHH
Confidence 444 99999999877765 6677665432 3444454332 2233445444444333333 356666
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCC
Q 014769 317 DTLRESAEICYDGVKEIPCISCPNKP 342 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~~~~~~~p 342 (419)
++..++...+.+.|+++|.+..|..|
T Consensus 264 ~~~~~na~~va~~L~~hp~V~~V~yP 289 (395)
T PRK08114 264 RQHEESSLKVAEWLAEHPEVARVNHP 289 (395)
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECC
Confidence 77888888999999987765534344
No 267
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.86 E-value=8.3e-19 Score=162.87 Aligned_cols=316 Identities=15% Similarity=0.070 Sum_probs=210.1
Q ss_pred ChHHHHHHHHHHHhC---CCCCCCCCCCCCH---HHHHHHHHHHHhhCCCCCCCCcEEEccc-HHHHHHHHHHHhcCCCC
Q 014769 60 TAVEAEDAIVDAVRS---GKFNCYATNSGIP---PARRAIADYLSRDLPYKLSADDVYVTLG-CKQAVEVILSVLARPGA 132 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~---~~~~~Y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~i~~t~g-~~~al~~~~~~l~~~gd 132 (419)
.|..+++++.+.+.+ .....|....-.+ ++-+.+.+.++..++. .+..+|++++| +|++++.++..+..+||
T Consensus 3 ~p~~v~~~~~~~~~~~~~~~~~~~~~~hr~~~f~~~~~~~~~~l~~l~~~-~~~~~v~~~~gsgT~a~ea~~~nl~~~~~ 81 (349)
T TIGR01364 3 LPEEVLEQAQKELLNFNGTGMSVMEISHRSKEFEAVANEAESDLRELLNI-PDNYEVLFLQGGATGQFAAVPLNLLAEGK 81 (349)
T ss_pred CCHHHHHHHHHHHhCccCCCccccccCCCchHHHHHHHHHHHHHHHHhCC-CCCceEEEEcCCchHHHHHHHHhcCCCCC
Confidence 456777888877663 1122222211122 4444444444444443 13346777755 99999999999998999
Q ss_pred eEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCC--CcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHH
Q 014769 133 NVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPER--NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEM 208 (419)
Q Consensus 133 ~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~ 208 (419)
++++...+.++ +...++..|. +..+..++.. +..++++.++ ++++++.|.+++..+.||+..+ ++
T Consensus 82 ~~l~i~~G~fg~r~~~~a~~~g~-~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~--------~l 150 (349)
T TIGR01364 82 VADYIVTGAWSKKAAKEAKKYGV-VNVVASGKEGNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR--------EL 150 (349)
T ss_pred eEEEEECCHHHHHHHHHHHHhCC-cEEEeccccCCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc--------ee
Confidence 99988777765 3567788888 6666654222 2245666554 3457889999999999999875 55
Q ss_pred HHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH------
Q 014769 209 ARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI------ 282 (419)
Q Consensus 209 ~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l------ 282 (419)
++.+++++++|.+.+. +..+..+..+ + +++.|.+|.++.+| +|+++.+++ ..+++
T Consensus 151 ~~~~~~l~iVDavss~----g~~~id~~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~--------~~~~~~~~~~~ 211 (349)
T TIGR01364 151 PDVKNAPLVADMSSNI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTVVIVRKD--------LLGRASRITPS 211 (349)
T ss_pred cccCCCeEEEEccccc----cCccCCHHHc---c--EEEEecccccCCCc--eEEEEECHH--------HHhhcccCCCC
Confidence 6678999999999987 3233333332 2 77889999988666 888887652 22211
Q ss_pred ----Hh-h--hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-C--CceEEEEee
Q 014769 283 ----KD-C--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNK-P--EGSMVTMVK 351 (419)
Q Consensus 283 ----~~-~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p--~~g~~~~~~ 351 (419)
.. . ....++++....+++.++|+....+ .++.+.++.+++.+++++.|++++|+..... | .....+.+.
T Consensus 212 ~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~ 291 (349)
T TIGR01364 212 MLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFT 291 (349)
T ss_pred cchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEe
Confidence 10 1 1223578888888888888876556 5999999999999999999999976642211 2 122334445
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~ 414 (419)
++.. ....++... +.++|+.+.+|.. ..+.+|+|+. .+.+||+.+++.|++++++
T Consensus 292 ~~~~-----~~~~~~~~~-~~~~Gi~~~~~~~--~~g~vRvS~~~~nt~edid~l~~al~~~~~~ 348 (349)
T TIGR01364 292 LGNE-----ELEKRFLKE-AEERGLVSLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFQKK 348 (349)
T ss_pred cCCh-----hHhHHHHHH-HHHCCCcccCCcc--ccCeeEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 5421 112444444 4678997777754 3468999993 5899999999999987765
No 268
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.86 E-value=2.7e-19 Score=167.47 Aligned_cols=311 Identities=15% Similarity=0.090 Sum_probs=202.6
Q ss_pred CCChHHHHHHHHHHHhCC-C--CCCCCCC-------CCCHHHHHHHHHHHHhhCCCCC-CCCcEEEccc-HHHHHHHHHH
Q 014769 58 FRTAVEAEDAIVDAVRSG-K--FNCYATN-------SGIPPARRAIADYLSRDLPYKL-SADDVYVTLG-CKQAVEVILS 125 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~-~--~~~Y~~~-------~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~g-~~~al~~~~~ 125 (419)
.+.++.|++++.+.+.+. . ...|... .-+.+.|+.+++++ +. ++++|++|+| +|++++.++.
T Consensus 8 ~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~------~~~~~~~vvf~~gs~T~a~~~~~~ 81 (355)
T cd00611 8 AALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELL------NIPDNYKVLFLQGGATGQFAAVPL 81 (355)
T ss_pred CCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEEcCCchHHHHHHHH
Confidence 357899999998887421 1 1112221 22457788888877 33 5678999987 9999999999
Q ss_pred HhcC---CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccC-hHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 126 VLAR---PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD-LDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 126 ~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
.+.. +||.|++ .+........++..|.++..++.+...++. + .+..+..++++++.|.+++..|.||..++
T Consensus 82 ~l~~~~~~~~~i~~-g~~~~~~~~~a~~~g~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~--- 156 (355)
T cd00611 82 NLLGDKGTADYVVT-GAWSAKAAKEAKRYGGVVVIVAAKEEGKYT-KIPDVETWDLAPDAAYVHYCSNETIHGVEFD--- 156 (355)
T ss_pred hcCCCCCeEEEEEC-CHHHHHHHHHHHhcCCCcEEEecccccCCC-CCCCHhhcCCCCCCCEEEEeCCcccccEEcc---
Confidence 9987 4444443 111111233668889998888875332221 2 33333445678899999999999999753
Q ss_pred HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 281 (419)
++++.+|+++++|.+++. |..+..+..++ +.+.|.+|.+|.+| +|+++++++ ..++
T Consensus 157 -----~i~~~~g~~~~VDa~qs~----g~~~idv~~~~-----~~~ss~~K~lGP~G--~g~l~~~~~--------~~~~ 212 (355)
T cd00611 157 -----EVPDTGGVPLVADMSSNI----LSRPIDVSKFG-----VIYAGAQKNLGPAG--VTVVIVRKD--------LLGK 212 (355)
T ss_pred -----eecccCCCeEEEEccccc----cCCCCCHHHhC-----EEEeecccccCCCc--eEEEEECHH--------HHhh
Confidence 234458999999999997 33333333332 35566899887666 888888652 2221
Q ss_pred HHh-------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCC-CCCCC--Cc
Q 014769 282 IKD-------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCIS-CPNKP--EG 344 (419)
Q Consensus 282 l~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~p--~~ 344 (419)
+.. .....++++.....++.++++..... .++.+.++.+++.+++++.|+++||+. ....+ ..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~~l~~~~gl~~~~~~~~~rs 292 (355)
T cd00611 213 ARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARS 292 (355)
T ss_pred cccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCccccccCCCHHHcC
Confidence 111 11124577777888888888875555 588899999999999999999998763 11111 22
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF 411 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 411 (419)
+..+.+.++.. ....++...+ .+.|+...++.. ..+.+|+|+. .+++|++++++.|+++
T Consensus 293 ~~vvsf~~~~~-----~l~~~~~~~~-~r~G~~~~~~~~--~~g~vR~S~~~~nt~edi~~l~~al~~~ 353 (355)
T cd00611 293 RMNVPFRLGKE-----ELEKEFLKEA-EAAGMIGLKGHR--SVGGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred ceEEEEEcCCh-----hhhHHHHHHH-HHCCCcccCCCc--ccCeEEEEccCCCCHHHHHHHHHHHHHH
Confidence 23344455421 0123333344 668998666653 3478999995 4899999999999874
No 269
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.86 E-value=2.1e-19 Score=169.50 Aligned_cols=326 Identities=14% Similarity=0.063 Sum_probs=205.7
Q ss_pred eeeccCCCCCCCCCCCChHH-HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCC-CCCcEEEcc-cHHHHH
Q 014769 44 VVPLGYGDPTAFPCFRTAVE-AEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL-SADDVYVTL-GCKQAV 120 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~-v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~-g~~~al 120 (419)
.+.|..|- .++++. +++++...+.........-..-+.+.|+.+++++ +. ++++|++++ |+|+++
T Consensus 13 ~~~f~~Gp------~~~~~~~v~~a~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~~~~gs~T~~~ 80 (378)
T PRK03080 13 DPRFSSGP------CKKRPGWQLEALADALLGRSHRQKPVKALLKRVIEGTRELL------SLPEGYEVGIVPGSDTGAW 80 (378)
T ss_pred CCCcCCCC------cCCChHHHHHHHHhhhcccCcCCHHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchHHHH
Confidence 45666662 234555 8888876543211111111233456777777776 33 345788775 899999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCc-HH-HHhhcCC-EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYY-EG-IAQRKQV-EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~-~~-~~~~~g~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
+.++..+.++++.+++.+-.|..- .. ..+..|. ++..++.+ .+..+|+++++ . ++.|.+++..|.||..+
T Consensus 81 ~~~~~~l~~~~~~~vi~~g~f~~~~~~~~~~~~g~~~v~~~~~~--~g~~~d~~~i~----~-~~~V~~~h~~t~tG~~~ 153 (378)
T PRK03080 81 EMALWSLLGARRVDHLAWESFGSKWATDVVKQLKLEDPRVLEAD--YGSLPDLSAVD----F-DRDVVFTWNGTTTGVRV 153 (378)
T ss_pred HHHHHhcCCCCcceEEEeCHHHHHHHHHHHhhcCCCCceEeccC--CCCCCCHhhcC----C-CCCEEEEecCCccceec
Confidence 999999976433333334444432 22 2255788 88887754 33456766533 2 56688999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchh
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~ 276 (419)
| +++|++ +++|+++++|.+++.. ..+..+..+ .+++.|.+|+++. +| +|+++++++
T Consensus 154 p---i~~I~~--~~~g~~~vVDa~qs~G----~~pidv~~i-----D~~~~s~~K~l~~P~G--~g~l~v~~~------- 210 (378)
T PRK03080 154 P---VARWIG--ADREGLTICDATSAAF----ALPLDWSKL-----DVYTFSWQKVLGGEGG--HGMAILSPR------- 210 (378)
T ss_pred c---chhhcc--ccCCCeEEEecccccc----cCCCCHHHC-----cEEEEehhhhCCCCCc--eEEEEECHH-------
Confidence 9 777777 7889999999999873 233333332 3788899998654 45 888888652
Q ss_pred hHHHHHHh----------------------h--hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhh
Q 014769 277 GIIDSIKD----------------------C--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 277 ~~~~~l~~----------------------~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~ 331 (419)
..+.+.. . ..+.++++.....++.++|+...+. .++++.++.+++.+.+++.|+
T Consensus 211 -~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~ 289 (378)
T PRK03080 211 -AVERLESYTPARPIPKFFRLTKGGKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAANASVLYDWAE 289 (378)
T ss_pred -HHHhhhcccCCCCCchhheeccchHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHH
Confidence 2222211 0 0112345555555556666654444 578888999999999999999
Q ss_pred cCCCCCCCC-CC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHH
Q 014769 332 EIPCISCPN-KP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLG 406 (419)
Q Consensus 332 ~~~~~~~~~-~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~ 406 (419)
+++++..+. .+ .++..+.+.++... .. .+.++..++++ +++.+..|......+.+|+|+. .++++++.+++
T Consensus 290 ~~~~~~~~~~~~~~~s~~i~~~~~~~~~--~~-~~~~~~~~l~~-~~i~v~~g~~~~~~~~vRis~~~~~t~~di~~l~~ 365 (378)
T PRK03080 290 KTPWATPLVADPATRSNTSVTLDFVDAQ--AA-VDAAAVAKLLR-ENGAVDIEPYRDAPNGLRIWCGPTVEPADVEALTP 365 (378)
T ss_pred hCCCcccccCCccccCccEEEEEcCCch--HH-HHHHHHHHHHH-cCCeeccccccCCCCcEEEecCCCCCHHHHHHHHH
Confidence 886555331 12 12234445555300 00 13456666655 4888877653223578999994 68999999999
Q ss_pred HHHHHHHHHh
Q 014769 407 RMKAFCQRHT 416 (419)
Q Consensus 407 ~l~~~~~~~~ 416 (419)
.|+++++++.
T Consensus 366 al~~~~~~~~ 375 (378)
T PRK03080 366 WLDWAFERLK 375 (378)
T ss_pred HHHHHHHHHh
Confidence 9999888764
No 270
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.85 E-value=1.8e-18 Score=164.54 Aligned_cols=341 Identities=13% Similarity=0.079 Sum_probs=207.9
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+|+.++||..|.-... .-.-+|.+.+++.+++..... ..|.. .+.+..+|+.+.+..+ -..+.++++++++
T Consensus 72 ~dG~~ylD~~~g~~~~~-lGh~hp~v~~Av~~ql~~l~~~~~~~~----~~~~~~lAe~L~~~~p--~~~~~v~f~~SGs 144 (442)
T TIGR03372 72 TQGNEFIDCLGGFGIFN-VGHRNPNVIAAVENQLAKQPLHSQELL----DPLRALLAKTLAALTP--GKLKYSFFCNSGT 144 (442)
T ss_pred CCCCEEEECCccHHhhh-cCCCCHHHHHHHHHHHHhCCCcccccC----CHHHHHHHHHHHHhCC--CCcCEEEEeCCch
Confidence 45888999988822211 123579999999999875432 12222 2344455555543222 1236799999999
Q ss_pred HHHHHHHHHhcC----CC-CeEEeeCCCCCCcHHHHhhcCCEEE----EEeccCCCC--cccChHHHHHhhcC-----Cc
Q 014769 118 QAVEVILSVLAR----PG-ANVLLPRPGWPYYEGIAQRKQVEVR----HFDLLPERN--WEVDLDAVEALADK-----NT 181 (419)
Q Consensus 118 ~al~~~~~~l~~----~g-d~vlv~~p~~~~~~~~~~~~g~~~~----~~~~~~~~~--~~~~~~~l~~~~~~-----~~ 181 (419)
||++.+++.... .| .+|+....+|++....+........ +.++.+.-. .-.|.+.+++.++. +.
T Consensus 145 EA~e~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~ 224 (442)
T TIGR03372 145 ESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDD 224 (442)
T ss_pred HHHHHHHHHHHHHHhhcCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCc
Confidence 999999987643 23 6799999999987544433321110 111111000 01256666665531 33
Q ss_pred cEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-
Q 014769 182 AAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG- 258 (419)
Q Consensus 182 ~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G- 258 (419)
.+.+|+.| ....|.. .|+++++++.++|+++|+++|+||++.++...|.. .....++..+.++ +++|.+ ..|
T Consensus 225 vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~-~a~e~~gv~PDiv---t~gK~l-g~G~ 299 (442)
T TIGR03372 225 VAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKM-FACEHEGVQPDIL---CLAKAL-GGGV 299 (442)
T ss_pred EEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccc-hhhhhcCCCCCee---eehhhh-cCCc
Confidence 45566666 4555664 57999999999999999999999999876555542 2222333222333 589995 467
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc---
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE--- 332 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~--- 332 (419)
+++|.+++++ ++.+.+... ...+++.++++..++.+.|+...++.+ .++.++..+++.+.|++
T Consensus 300 ~Pigavv~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~~~l---~~~~~~~G~~l~~~L~~l~~ 368 (442)
T TIGR03372 300 MPIGATIATE--------AVFSVLFDNPFLHTTTFGGNPLACAAALATINELLEKNL---PAQAAIKGDFLLDGFQQLAA 368 (442)
T ss_pred ccceEEEecH--------HHHHhhhccCccccCCCCCCHHHHHHHHHHHHHHHhccH---HHHHHHHHHHHHHHHHHHHH
Confidence 6899998865 566666321 123556688888888888875332222 23344444445444443
Q ss_pred -CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769 333 -IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM 408 (419)
Q Consensus 333 -~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l 408 (419)
.| .+.. ....|.++.+.+... .....+...+ .++||++.+... ..+.+|+.+ ..++++++++++++
T Consensus 369 ~~~~~i~~--vRG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~~~~l 438 (442)
T TIGR03372 369 EYPDLIIE--ARGKGLLMAIEFRDN-----EIGYAFAKEL-FQQNILVAGTLN--NAKSIRIEPPLTITIEQCALVIKAA 438 (442)
T ss_pred hCCCceEE--EecceEEEEEEeCCh-----HHHHHHHHHH-HHCCcEEeecCC--CCCEEEEECCcccCHHHHHHHHHHH
Confidence 33 2221 234577777777531 0134556666 567999875422 146899988 46999999999999
Q ss_pred HHHH
Q 014769 409 KAFC 412 (419)
Q Consensus 409 ~~~~ 412 (419)
++++
T Consensus 439 ~~~~ 442 (442)
T TIGR03372 439 KDAL 442 (442)
T ss_pred HHhC
Confidence 8763
No 271
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.85 E-value=8.1e-18 Score=153.62 Aligned_cols=312 Identities=21% Similarity=0.236 Sum_probs=211.5
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeC
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPR 138 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~ 138 (419)
......+++.+.++.+.... ++ -..++++++++|+ ...+.+.++++|.|+.++++++ .+|||.|++++
T Consensus 13 i~~~e~~~v~~vl~sg~i~~-G~--~v~~FE~~~ae~~--------G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps 81 (374)
T COG0399 13 IGEEELAAVQEVLKSGWLTG-GP--FVRRFEQAFAEYL--------GVKYAVAVSSGTAALHLALLALAIGPGDEVIVPS 81 (374)
T ss_pred cchHHHHHHHHHHHcCCeec-Ch--HHHHHHHHHHHHh--------CCCeEEEecChHHHHHHHHHhcCCCCCCEEEecC
Confidence 34677788899998877644 44 3589999999998 5678999999999999999976 48999999999
Q ss_pred CCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 139 PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 139 p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
-+|....+.....|+++++++++++ .+.+|++.+++++++++++|+.++- -|...+ +++|.++|++||++||+
T Consensus 82 ~TfvATan~i~~~Ga~PVFvDid~~-T~nid~~~ie~aIt~~tKAIipVhl---~G~~~d---m~~i~~la~~~~l~vIE 154 (374)
T COG0399 82 FTFVATANAVLLVGAKPVFVDIDPD-TLNIDPDLIEAAITPRTKAIIPVHL---AGQPCD---MDAIMALAKRHGLPVIE 154 (374)
T ss_pred CchHHHHHHHHHcCCeEEEEecCCc-ccCCCHHHHHHHcccCCeEEEEehh---ccCCCC---HHHHHHHHHHcCCeEEE
Confidence 9999999999999999999999865 5689999999999999999988765 244445 88999999999999999
Q ss_pred cccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCC---
Q 014769 219 DEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI--- 292 (419)
Q Consensus 219 De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--- 292 (419)
|.+++... |.|.. +..+++ +.+.||. |.+.. | -.|.+++++ +++.++++...+.....
T Consensus 155 DaAqa~Ga~y~gk~---vGt~Gd----~~~fSF~~~K~itt-g-EGGav~tnd-------~ela~k~~~lr~hG~~~~~~ 218 (374)
T COG0399 155 DAAQAHGATYKGKK---VGSFGD----IGAFSFHATKNLTT-G-EGGAVVTND-------EELAEKARSLRNHGLSRDAV 218 (374)
T ss_pred EcchhccCeecCcc---cccccc----eEEEEecCCCCccc-c-CceEEEeCC-------HHHHHHHHHHHHhCcCCCcc
Confidence 99998743 34432 233333 4445665 66433 3 558888765 35666666554321111
Q ss_pred ----------c---hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce---EE-EEeecCcc
Q 014769 293 ----------P---TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS---MV-TMVKLNPW 355 (419)
Q Consensus 293 ----------~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g---~~-~~~~~~~~ 355 (419)
| +-.|+|+. +.+ -+.+++..++-++..+...+.|++++++.....+.+. ++ ..+.++..
T Consensus 219 ~~y~~~~~G~N~rm~~iqAAig--l~Q--L~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~ 294 (374)
T COG0399 219 FKYLHEELGYNYRLTEIQAAIG--LAQ--LERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEE 294 (374)
T ss_pred ccceeeecccccCHHHHHHHHH--HHH--HHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeeeeeeEEEecCC
Confidence 1 11122221 111 2446666666667777777888877665533333332 22 22333321
Q ss_pred cccCCCCHHHHHHHHHHhcCeE----eecCCCC--------C---C--------CCeEEEEe--ecCHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVI----VTPGIYV--------G---L--------KNWLRIAF--CAEPSALKDGLGRMKA 410 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~----v~~g~~~--------~---~--------~~~~Ris~--~~~~~~l~~~l~~l~~ 410 (419)
..+...+...| ++.||. ..|.... . . ...++|.+ ..+++++++.++.|++
T Consensus 295 ----~~~R~~l~~~L-~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~ 369 (374)
T COG0399 295 ----GISRDALMESL-KEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKE 369 (374)
T ss_pred ----CCCHHHHHHHH-HhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 12345555444 777554 3442211 0 0 24677776 4689999999999999
Q ss_pred HHHH
Q 014769 411 FCQR 414 (419)
Q Consensus 411 ~~~~ 414 (419)
++..
T Consensus 370 ~~~~ 373 (374)
T COG0399 370 VLGS 373 (374)
T ss_pred Hhcc
Confidence 8764
No 272
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.85 E-value=1.2e-17 Score=159.95 Aligned_cols=351 Identities=15% Similarity=0.093 Sum_probs=210.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|.-... .-.-+|.+.+++.+++..... +....-..+....+|+.+.+..+. -..+.+++++++++
T Consensus 51 ~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~lAe~L~~~~p~-~~~~~v~f~~SGsE 126 (441)
T PRK05769 51 VDGNVYLDFNAGIAVTN-VGHAHPKVVKAVKEQAEKFLH--YSLTDFYYEPAVELAERLVEIAPG-GFEKKVFFTNSGTE 126 (441)
T ss_pred CCCCEEEECCCchhhcc-cCCCCHHHHHHHHHHHHhccC--ccCcccCCHHHHHHHHHHHHhCCC-CCCCEEEECCchHH
Confidence 45888999988844322 123578999999999876432 111111124455566666543221 12368999999999
Q ss_pred HHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCC--cc---------cChH
Q 014769 119 AVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERN--WE---------VDLD 171 (419)
Q Consensus 119 al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~---------~~~~ 171 (419)
|++.+++.... . ..+|+....+|++....+... +. .+..++...... +. -.++
T Consensus 127 A~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (441)
T PRK05769 127 SNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPLMPGVIHVPYPNPYRNPWGIENPEECGNAVLD 206 (441)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCCCCCeEEeCCCccccccccCCchHHHHHHHHH
Confidence 99999987542 2 367888899998875443322 11 111222110000 00 0123
Q ss_pred HHHH-hhc----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 172 AVEA-LAD----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 172 ~l~~-~~~----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
.+++ .++ .+..+.+++.| ....|. ..+.++++++.++|+++|+++|+||++.++...|..+ ....++..+.+
T Consensus 207 ~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~-a~~~~gv~pDi 285 (441)
T PRK05769 207 FIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMF-AIEHFGVEPDI 285 (441)
T ss_pred HHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccccee-hhhccCCCCCE
Confidence 3444 221 23455666777 445566 4679999999999999999999999999875555432 22233322233
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
+ +++|.++ .|+++|++++++ ++++.+......+++.+++++.++.+.|+.... ...++++++.+
T Consensus 286 v---t~~K~l~-~G~p~gav~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~ 349 (441)
T PRK05769 286 I---TLAKAIA-GGLPLGAVIGRA--------ELMFLPPGSHANTFGGNPVAAAAALATLEELEE----GLLENAQKLGE 349 (441)
T ss_pred E---EEccccc-CCcccEEEEEeh--------hhhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 3 5789975 689999999875 344333222233456688888888888875322 44556666666
Q ss_pred HHHHHhhcCC-CCCCC-CCCCceEEEEeecCccccc-CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHH
Q 014769 325 ICYDGVKEIP-CISCP-NKPEGSMVTMVKLNPWLLE-DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPS 399 (419)
Q Consensus 325 ~l~~~l~~~~-~~~~~-~~p~~g~~~~~~~~~~~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~ 399 (419)
++++.|+++. ...++ ....-|.++.+.+...... .......+...+ .++||++.+.. ...+|+++. .+++
T Consensus 350 ~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~Gil~~~~~----~~~lr~~p~l~~t~~ 424 (441)
T PRK05769 350 YLRKELKELKEKYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLYEA-FKRGLLLLGAG----KSAIRIIPPLIITEE 424 (441)
T ss_pred HHHHHHHHHHHhCCCeeeeecceEEEEEEeccCCccccHHHHHHHHHHH-HhCCcEEecCC----CCEEEEeCCCCCCHH
Confidence 7776665431 11111 1223366666666321000 000123344444 56799987632 367899984 5999
Q ss_pred HHHHHHHHHHHHHHHH
Q 014769 400 ALKDGLGRMKAFCQRH 415 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~ 415 (419)
+|+++++++++++++.
T Consensus 425 ~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 425 EADIGLEILEEAIKEL 440 (441)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999999764
No 273
>PRK02769 histidine decarboxylase; Provisional
Probab=99.85 E-value=1.7e-17 Score=155.25 Aligned_cols=289 Identities=12% Similarity=0.075 Sum_probs=200.6
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 86 IPPARRAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
..++.+.+.+++.+.+|. ++++ .++|+|+|+++..++.... .+++.|++++-.|++....+..+|.+...++.+
T Consensus 63 ~~~~e~~~~~~~a~l~g~--~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~~~lg~~~~~V~~~ 140 (380)
T PRK02769 63 SFDFERDVMNFFAELFKI--PFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIARLLRIKSRVITSL 140 (380)
T ss_pred hHHHHHHHHHHHHHHhCC--CCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHHHHcCCCCceeccC
Confidence 456666666666665654 3344 4889999999877665542 467899999999999999999999988888875
Q ss_pred CCCCcccChHHHHHhhcCC---ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC---CeEEEcccccccccCCC-CCCC
Q 014769 162 PERNWEVDLDAVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR---VMVVADEVYGHLTFGSI-PYTP 234 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~---~~li~De~~~~~~~~~~-~~~~ 234 (419)
+ ++.+|+++|+++++++ +.+|+++.++|+||.+.| +++|.++|+++| +++++|.+|+.+...-. ...+
T Consensus 141 ~--~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idp---i~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~ 215 (380)
T PRK02769 141 P--NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDN---IKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPP 215 (380)
T ss_pred C--CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHhCCCceEEEEEecccceeecccCcccc
Confidence 4 4579999999998775 788889999999999999 888999999998 69999999987543210 1111
Q ss_pred ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh-------h-hccccCCchHHHHHHHHHHcc
Q 014769 235 MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-------C-LSIYSDIPTFIQGAIPQILEK 306 (419)
Q Consensus 235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~l~~ 306 (419)
+ .+.. +-..+..|.+|.+ .....+|.+++++. ..+.+.. . ....++.+.....++..+|+.
T Consensus 216 ~-d~~~-~vDsis~s~HK~~-~~P~g~G~l~~r~~--------~~~~~~~~~~yl~~~d~t~~GSR~g~~~l~lw~aL~~ 284 (380)
T PRK02769 216 F-SFAD-GIDSIAISGHKFI-GSPMPCGIVLAKKK--------YVERISVDVDYIGSRDQTISGSRNGHTALLLWAAIRS 284 (380)
T ss_pred C-CccC-CCCEEEECCcccC-CCCCCcEEEEEehh--------hhhhcccCccccCCCCCCccCCCCcHHHHHHHHHHHH
Confidence 1 1111 2225566899984 44456899988762 2232211 0 011234444445555566665
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
...+.+++..++..++.+++.+.|++. +++.+..|... .+.++.+ + .++ . +|..+.+.
T Consensus 285 lg~~G~~~~~~~~~~la~~l~~~L~~~-g~~~~~~p~~~-~v~f~~~--------~-~~~----~--~~w~l~~~----- 342 (380)
T PRK02769 285 LGSKGLRQRVQHCLDMAQYAVDRLQAN-GIPAWRNPNSI-TVVFPCP--------S-ERI----W--KKWHLATS----- 342 (380)
T ss_pred HCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCce-EEEEcCC--------C-HHH----H--hCeeEccc-----
Confidence 556788999999999999999999886 77766566544 3333332 2 222 1 35655543
Q ss_pred CCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAF--CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~ 414 (419)
.+++|+.+ ..+.+.++.+++.|...++.
T Consensus 343 ~~~~hi~~~~~~~~~~~~~f~~dl~~~~~~ 372 (380)
T PRK02769 343 GNQAHIITMPHHNKQQIDSLIDELIFDLKN 372 (380)
T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHhc
Confidence 34889998 45788999999999887764
No 274
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.85 E-value=3.6e-18 Score=162.30 Aligned_cols=225 Identities=16% Similarity=0.130 Sum_probs=152.9
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~ 160 (419)
-...+++.++++. +. +..++++++++|+..++.++.++||+|+++...|.+.. ..+...|+++.+++
T Consensus 70 t~~~le~~la~l~------g~--~~~v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd- 140 (437)
T PRK05613 70 TVEALENRIASLE------GG--VHAVAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVE- 140 (437)
T ss_pred HHHHHHHHHHHHh------CC--CeEEEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEEC-
Confidence 3567888888887 22 45555556668888888888899999999999998763 34567788888876
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
++ .|++.+++++++++++|++.++.||+|.+.| +++|.++|+++|+++|+|.+++.... ..++ .++.
T Consensus 141 ~~-----~d~e~l~~~l~~~tk~V~~e~~~Np~~~v~d---i~~I~~la~~~gi~livD~t~a~g~~----~~p~-~~Ga 207 (437)
T PRK05613 141 NP-----DDPESWQAAVQPNTKAFFGETFANPQADVLD---IPAVAEVAHRNQVPLIVDNTIATAAL----VRPL-ELGA 207 (437)
T ss_pred CC-----CCHHHHHHhCCccCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCeEEEECCCccccc----cChH-HhCC
Confidence 22 2789999999988999999999999999999 99999999999999999999875221 1122 2333
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc----------------------------chhhHHHHHH-hh-hcccc
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF----------------------------QKSGIIDSIK-DC-LSIYS 290 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----------------------------~~~~~~~~l~-~~-~~~~~ 290 (419)
.+++.|++|.++..|--+|.+++.+....+ ....+..+.+ .. .....
T Consensus 208 ---Divv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 284 (437)
T PRK05613 208 ---DVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGA 284 (437)
T ss_pred ---CEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccccccccchHHHHHHHHHHHHHhcCC
Confidence 388889999987766655665553211000 0000111111 11 22233
Q ss_pred CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769 291 DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP 339 (419)
Q Consensus 291 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 339 (419)
..++...+.+..-|+ -+.-+.++..++...+.+.|+++|.+..|
T Consensus 285 ~~~p~~a~l~~rgl~-----TL~lR~~~~~~nA~~lA~~L~~hp~V~~V 328 (437)
T PRK05613 285 TLSPFNAWVTAQGLD-----TLSLRLERHNENAIKVAEFLNNHEKVAKV 328 (437)
T ss_pred CCCHHHHHHHHcccC-----cHHHHHHHHHHHHHHHHHHHHcCCCcceE
Confidence 445554444433333 36666677788888999999988765433
No 275
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.84 E-value=7.3e-18 Score=161.63 Aligned_cols=353 Identities=12% Similarity=0.073 Sum_probs=209.4
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGC 116 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~ 116 (419)
..+|+.++||..|.-... .-.-+|.+.+++.++++..... .......+....+++.+.+..+ -. .+.|++++++
T Consensus 38 D~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~ql~~~~~~--~~~~~~~~~~~~lae~L~~~~p--~~~~~~v~f~~SG 112 (445)
T PRK08593 38 DVDGKTYIDLLASASSQN-VGHAPPRVVEAIKAQADKFIHY--TPAYMYHEPLVRLAKKLCELAP--GDFEKRVTFGLSG 112 (445)
T ss_pred eCCCCEEEECCccHHhhc-CCCCCHHHHHHHHHHHHhccCc--cccccCCHHHHHHHHHHHHhCC--CCCCCEEEECCch
Confidence 446889999988743221 1235799999999998764321 1111122344445555544222 12 2589999999
Q ss_pred HHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCC--cc-cC-------h
Q 014769 117 KQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERN--WE-VD-------L 170 (419)
Q Consensus 117 ~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~-~~-------~ 170 (419)
++|++.+++.... .| .+|+....+|++....+... +. .+..++...... +. .+ +
T Consensus 113 seA~e~AiklAr~~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 192 (445)
T PRK08593 113 SDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYL 192 (445)
T ss_pred HHHHHHHHHHHHHhhCCCeEEEECCCcCCCcHHHHhhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHH
Confidence 9999999987532 23 57888899998864333211 10 122222111000 00 01 1
Q ss_pred HHHHHhhc----CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 171 DAVEALAD----KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 171 ~~l~~~~~----~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
+.+++.+. .+..+.+|+.| .+..|.. .|.++++++.++|+++|+++|+||++.++...|..+ ....++..+.+
T Consensus 193 ~~~~~~~~~~~~~~~iAavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~-a~~~~gv~pDi 271 (445)
T PRK08593 193 APLKEMFEKYLPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWS-SISHFNITPDL 271 (445)
T ss_pred HHHHHHHHhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHH-HHHhcCCCCCE
Confidence 33443332 13345556666 5666775 799999999999999999999999998875555321 11222222222
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
+ +++|.++ .|+++|++++++ ++++.+.... .++++.++++..++.+.|+...++ +..++++++.
T Consensus 272 ~---t~gK~l~-~G~p~gav~~~~--------~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g 336 (445)
T PRK08593 272 M---SFGKSLA-GGMPMSAIVGRK--------EIMESLEAPAHLFTTGANPVSCAAALATIDMIEDE---SLLQRSAEKG 336 (445)
T ss_pred e---eeccccc-CCcccEEEEEcH--------HHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHH
Confidence 3 7899964 689999999975 5777665322 235667888888777777653322 2334444444
Q ss_pred HHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769 324 EICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-- 394 (419)
Q Consensus 324 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-- 394 (419)
+++.+.|++ +|.+.. ...-|.++.+.+.........+ ...+...+ .++||++.+.. .+.+|+++
T Consensus 337 ~~l~~~L~~l~~~~~~v~~--vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~~----~~~lr~~p~l 409 (445)
T PRK08593 337 EYARKRFDQWVSKYNFVGD--VRGYGLSIGIDIVSDKKLKTRDNEAALKICNYC-FEHGVVIIAVA----GNVLRFQPPL 409 (445)
T ss_pred HHHHHHHHHHHhcCCcEEE--EeccceEEEEEEecCCCcCCCcHHHHHHHHHHH-HHCCeEEeccC----CCEEEEECCC
Confidence 555555543 332221 2233555555553210000011 23455555 56799986632 36799988
Q ss_pred ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 395 CAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
..++++|+++++.+.+++.++.+.
T Consensus 410 ~~t~~~id~~~~~l~~~l~~~~~~ 433 (445)
T PRK08593 410 VITYEQLDTALNTIEQAFTALEAG 433 (445)
T ss_pred ccCHHHHHHHHHHHHHHHHHHhcc
Confidence 468999999999999999887554
No 276
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=4.1e-18 Score=163.31 Aligned_cols=348 Identities=12% Similarity=0.093 Sum_probs=214.5
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
..+|+.++||..|.-... .-.-+|.+.+++.+++..... ..|. ..+.+..+++.+....+ -..+.+++++++
T Consensus 78 D~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~ql~~l~~~~~~~----~~~~~~~lae~L~~~~p--~~~~~v~f~~SG 150 (459)
T PRK11522 78 DTQGQEFIDCLGGFGIFN-VGHRNPVVVSAVQNQLAKQPLHSQEL----LDPLRAMLAKTLAALTP--GKLKYSFFCNSG 150 (459)
T ss_pred ECCCCEEEECCcCHHhhh-cCCCCHHHHHHHHHHHhhCccccccc----CCHHHHHHHHHHHHhCC--CCCCEEEEeCCc
Confidence 345888999988832211 123579999999999875432 1122 23445555555544222 223689999999
Q ss_pred HHHHHHHHHHhcC----CC-CeEEeeCCCCCCcHHHHhhcCCE-EEE---EeccCCCC--cccChHHHHHhhcC-----C
Q 014769 117 KQAVEVILSVLAR----PG-ANVLLPRPGWPYYEGIAQRKQVE-VRH---FDLLPERN--WEVDLDAVEALADK-----N 180 (419)
Q Consensus 117 ~~al~~~~~~l~~----~g-d~vlv~~p~~~~~~~~~~~~g~~-~~~---~~~~~~~~--~~~~~~~l~~~~~~-----~ 180 (419)
++|++.+++.... +| ..|+....+|++....+...... ... .+..+.-. .-.|.+.+++.+.. +
T Consensus 151 sEAve~AlklAr~~t~~~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~ 230 (459)
T PRK11522 151 TESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGD 230 (459)
T ss_pred hHHHHHHHHHHHHHhccCCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCC
Confidence 9999999987642 23 46888899999875444332211 111 11111000 01256777766642 2
Q ss_pred ccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
..+.+++.| ....|. ..|.++++++.++|+++|+++|+||++.++...|..+ ....++..+.++ +++|.+ ..|
T Consensus 231 ~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~-a~e~~gv~PDiv---t~gK~l-ggG 305 (459)
T PRK11522 231 DVAAVILEPIQGEGGVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMF-ACEHENVQPDIL---CLAKAL-GGG 305 (459)
T ss_pred cEEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhh-hhhccCCCCCEE---Eechhh-hCC
Confidence 345566666 555666 4688999999999999999999999998765555421 222233222333 678995 456
Q ss_pred -ceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-
Q 014769 259 -WRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI- 333 (419)
Q Consensus 259 -~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 333 (419)
+++|.+++++ ++.+.+... ...+++.++++..++.+.|+....+ ...++++++.+++.+.|+++
T Consensus 306 ~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~ 374 (459)
T PRK11522 306 VMPIGATIATE--------EVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLA 374 (459)
T ss_pred CccceeEEEcH--------HHHHHhccCCcccCCCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHH
Confidence 6899999865 466655321 2234566888888887877764322 23455566666666666543
Q ss_pred ---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769 334 ---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM 408 (419)
Q Consensus 334 ---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l 408 (419)
|... ......|.++.+.+... .....+...+ .++||.+.+... ..+.+|+.+ ..++++++++++++
T Consensus 375 ~~~~~~i-~~VrG~Gl~~giel~~~-----~~~~~i~~~l-~~~Gvl~~~~~~--~~~~lr~~Ppl~~t~~~id~~l~~l 445 (459)
T PRK11522 375 REYPDLV-QEARGKGMLMAIEFVDN-----EIGYNFASEM-FRQRVLVAGTLN--NAKTIRIEPPLTLTIEQCEQVLKAA 445 (459)
T ss_pred HhCCCce-eeEEeceeEEEEEecCc-----hHHHHHHHHH-HHCCeEEEecCC--CCCEEEEECCccCCHHHHHHHHHHH
Confidence 3211 11123467777777531 0134555555 567999976421 247899998 46999999999999
Q ss_pred HHHHHHHhc
Q 014769 409 KAFCQRHTK 417 (419)
Q Consensus 409 ~~~~~~~~~ 417 (419)
.+++++..+
T Consensus 446 ~~~l~~~~~ 454 (459)
T PRK11522 446 RKALAAMRV 454 (459)
T ss_pred HHHHHHHHH
Confidence 999987643
No 277
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.84 E-value=3e-18 Score=175.54 Aligned_cols=342 Identities=12% Similarity=0.068 Sum_probs=214.7
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--C-CCCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCC--cEEEcc
Q 014769 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--K-FNCYAT----NSGIPPARRAIADYLSRDLPYKLSAD--DVYVTL 114 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~-~~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~--~i~~t~ 114 (419)
++-|..+..+ ++.+..+.+++.+.+.+. . ...|.. ..-+.+.|+.+++++ +++++ .|++|+
T Consensus 35 ~iYLD~Aatt----~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~l------ga~~~~~~VvFts 104 (805)
T PLN02724 35 VVYLDHAGAT----LYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYF------NAPPSDYACVFTS 104 (805)
T ss_pred CEeEeCCCCC----CCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHh------CCCccceEEEEeC
Confidence 5777777532 223445666555544321 1 111111 123567888888888 55555 589999
Q ss_pred cHHHHHHHHHHHh-cCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCC------CCcccCh--HHHHHhh-----
Q 014769 115 GCKQAVEVILSVL-ARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPE------RNWEVDL--DAVEALA----- 177 (419)
Q Consensus 115 g~~~al~~~~~~l-~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~------~~~~~~~--~~l~~~~----- 177 (419)
|+|++++.++.++ .++||.|++..-.|.+.. ..++..|+.+..++++.. ....+++ +.++..+
T Consensus 105 naT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~~~~a~~~G~~v~~v~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~l~ 184 (805)
T PLN02724 105 GATAALKLVGETFPWSSESHFCYTLENHNSVLGIREYALEKGAAAIAVDIEEAANQPTNSQGSVVVKSRGLQRRNTSKLQ 184 (805)
T ss_pred ChHHHHHHHHHHCCCCCCCeEEEeeccccchHHHHHHHHHcCCeEEeccchhccccccccccccccchhhhhhhhhhhhc
Confidence 9999999999987 568999999877776543 334556888888887521 1112332 4555543
Q ss_pred -----cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC-----CCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769 178 -----DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL-----RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 178 -----~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-----~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
.+++++|.+++.+|-||.++|.+.+.++.+.++++ ++++++|.+++. +..+..+..++.+ +++
T Consensus 185 ~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~----g~~piDv~~~~~D---fl~ 257 (805)
T PLN02724 185 KREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGC----GTSPPDLSRYPAD---FVV 257 (805)
T ss_pred cccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhc----CCCCCChhhcCCC---EEE
Confidence 13457889999999999999955443333333222 357999999986 4444455555554 888
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------------------------hccccCCchHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------------------------LSIYSDIPTFIQGAIPQ 302 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------------------------~~~~~~~~~~~~~a~~~ 302 (419)
.|++|++|.| ..+|+++++++ +.+.+... ..-.++++.+...++.+
T Consensus 258 ~S~HK~~GgP-~G~G~L~vr~~--------~~~~l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l~a 328 (805)
T PLN02724 258 VSFYKIFGYP-TGLGALLVRRD--------AAKLLKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAALRH 328 (805)
T ss_pred EecceeccCC-CCceEEEEehh--------hhhhhcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHHHH
Confidence 8999987633 23899888752 22222110 01134666677677777
Q ss_pred HHcccchHHHHHHHHHHHHHHHHHHHHhhcCC------CCCCCCCC-------CceEEEEeecCcccccCCCCHHHHHHH
Q 014769 303 ILEKTKEDFFCKLIDTLRESAEICYDGVKEIP------CISCPNKP-------EGSMVTMVKLNPWLLEDINDDIEFALK 369 (419)
Q Consensus 303 ~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------~~~~~~~p-------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 369 (419)
+++....-..++..++.+...+++.+.|++++ ++.++... ..+..+.+.+.... +..-....+.+
T Consensus 329 al~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~--~~~v~~~~v~~ 406 (805)
T PLN02724 329 GFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRAD--GSWVGHREVEK 406 (805)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCC--CCEeCHHHHHH
Confidence 77654333567777888889999999998775 34423111 11223333343211 00012334567
Q ss_pred HHHhcCeEeecCCCCCC-----------------------------------CCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 370 LAKEESVIVTPGIYVGL-----------------------------------KNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 370 ll~~~gv~v~~g~~~~~-----------------------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
++.++||.++.|..+.. .+.+|+|++ .+.+|++++++.|++..
T Consensus 407 l~~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~g~ynt~eDvd~lv~~l~~~~ 486 (805)
T PLN02724 407 LASLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSFGYMSTFEDCQKFIDFIISSF 486 (805)
T ss_pred HHHhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEcCccCCHHHHHHHHHHHHHHh
Confidence 77889999998876531 278999995 58899999999999866
Q ss_pred H
Q 014769 413 Q 413 (419)
Q Consensus 413 ~ 413 (419)
-
T Consensus 487 ~ 487 (805)
T PLN02724 487 V 487 (805)
T ss_pred h
Confidence 3
No 278
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.84 E-value=3.8e-18 Score=160.73 Aligned_cols=307 Identities=14% Similarity=0.163 Sum_probs=198.2
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH-HHHHHHHHHhcC---CCCeEEeeCCCCCCcHHHHhhcCCEEEEEec-
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCK-QAVEVILSVLAR---PGANVLLPRPGWPYYEGIAQRKQVEVRHFDL- 160 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~-~al~~~~~~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~- 160 (419)
...+.+.+.+.+.+..|.. +.+..++++|+| .++.+++.++.. +||.|+++.-+|.+....+...|++++.++.
T Consensus 103 ~~~l~~~~e~~~~~~~G~~-~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 103 LYKLTNKLVKDFLKLLGLR-SIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHHHHcCCC-CCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHHHHHHHcCCeEEEeeee
Confidence 3455555555554444532 124688888888 688888887753 5899999999999999999999999999985
Q ss_pred cCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 161 LPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
..++++.+|++.+++++++ +.+++++.+|+ |+.....+++++|.++|+++|+++|+|++|+.....-..... ..
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~--t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~-~g 258 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTS--CFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELIN-KA 258 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCC--cCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhh-cc
Confidence 2455789999999999975 34556666665 444445566999999999999999999999853211000000 01
Q ss_pred cCCCCc-EEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHH
Q 014769 238 FGSIVP-VITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKL 315 (419)
Q Consensus 238 ~~~~~~-~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 315 (419)
.. .++ .+++.|++|.+.++|. |+++ +++ +++++.++..... ...+.+.+.+...++.. ..+.++++
T Consensus 259 ~~-~Grad~vv~s~hK~l~~pg~--Gg~I~~~d-------~el~~~i~~~y~g-~~~~s~~~~~~~~ll~~-G~~g~~~l 326 (444)
T TIGR03531 259 IK-VGRVDAVVSSTDKNFMVPVG--GAIIYSFD-------ENFIQEISKSYPG-RASASPSLDVLITLLSL-GSKGYLEL 326 (444)
T ss_pred cc-ccCCCeEEEeCccCCCCCCC--EEEEEECC-------HHHHHHHHHhccC-CCCChHHHHHHHHHHHh-CHHHHHHH
Confidence 11 111 3667799999887775 5544 544 2566666654321 22345566666666654 35788888
Q ss_pred HHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe----EeecCC------
Q 014769 316 IDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV----IVTPGI------ 382 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv----~v~~g~------ 382 (419)
.++..++++.+.+.|+++ -|......|....-+-+.+.... ..+...+- .+|...+| .|.||.
T Consensus 327 i~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~n~is~~~~~~~~~---~~~~~~~g-~~l~~~~v~g~r~v~~~~~~~~~~ 402 (444)
T TIGR03531 327 LKERKEMYKYLKELLQKLAERHGERLLDTPENPISSAMTLSTLK---GKDPTMLG-SMLYSRRVTGPRVVTNGDSKTVGG 402 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCcEeecCCCCceeEEEeccccc---ccCHHHHH-HHHHhCCCCCceeecCCCceEECC
Confidence 888899999998888764 14443334555544444454221 12344444 44455566 245665
Q ss_pred -C---CCC------CCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 383 -Y---VGL------KNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 383 -~---~~~------~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
. |+. ..|+-++. +.+.+|++.++++|++++
T Consensus 403 ~~~~~~~~~~~~~~~~y~~~~~~~g~~~~~~~~~~~~l~~~~ 444 (444)
T TIGR03531 403 CEFKGYGSHTSNYPCPYITAAAAIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred EEeecccccccCCCchhHHHHHHhCCcHHHHHHHHHHHhhcC
Confidence 2 222 13555554 678999999999998753
No 279
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.84 E-value=1.1e-17 Score=161.82 Aligned_cols=351 Identities=13% Similarity=0.085 Sum_probs=212.1
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
..+|+.+|||..|.-+..- -.-+|.+.+++.+++..... +... .+..+....+++.+.+... +.+.+.++++++|
T Consensus 85 D~dG~~ylD~~sg~~~~~l-Gh~hp~v~~Av~~ql~~~~~--~~~~~~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~SG 160 (504)
T PLN02760 85 DINGKKYLDALAGLWCTAL-GGSEPRLVAAATEQLNKLPF--YHSFWNRTTKPSLDLAKELLEMFT-ARKMGKVFFTNSG 160 (504)
T ss_pred ECCCCEEEEcCcCHHhccc-CCCCHHHHHHHHHHHhhccc--eecccccCcHHHHHHHHHHHhhcC-CCCCCEEEEeCCh
Confidence 3468999999998432221 24679999999999876432 1111 1234555666666544221 2233579999999
Q ss_pred HHHHHHHHHHhc------C-CC-CeEEeeCCCCCCcHHHHhh-cCCE------------EEEEeccCCCCcc--------
Q 014769 117 KQAVEVILSVLA------R-PG-ANVLLPRPGWPYYEGIAQR-KQVE------------VRHFDLLPERNWE-------- 167 (419)
Q Consensus 117 ~~al~~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~-~g~~------------~~~~~~~~~~~~~-------- 167 (419)
++|++.+++... . ++ .+|+..+.+|++....... .|.. +..++. ...+.
T Consensus 161 sEA~e~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~slsg~~~~~~~~~~~~~~~~~~~~--p~~~~~~~~~~~~ 238 (504)
T PLN02760 161 SEANDTQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDC--PHYWRFHLPGETE 238 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhhhccCChhhccCCCCCCCCcEEeCC--CcccccCCCCCcH
Confidence 999999999874 1 23 6789999999876432222 2211 111111 01111
Q ss_pred -----cChHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 168 -----VDLDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 168 -----~~~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
...+.++..+. ++..+.+|+.| ..-.|. ..|.++++++.++|++||+++|+||++.+|...|..+. ...
T Consensus 239 ~~~~~~~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a-~e~ 317 (504)
T PLN02760 239 EEFSTRLADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFG-CDK 317 (504)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhH-HHh
Confidence 01234555553 23455667777 444565 46899999999999999999999999988765554322 222
Q ss_pred cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccc
Q 014769 238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~ 308 (419)
++..+.+ .+|+|.++ .| +++|.+++++ ++++.+... ...+++.++++..++.+.|+...
T Consensus 318 ~gv~PDi---vtlgK~lg-gG~~PigAv~~~~--------~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~ 385 (504)
T PLN02760 318 YNIKPDL---VSLAKALS-SAYMPIGAVLVSP--------EISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYK 385 (504)
T ss_pred cCCCCcE---EEeccccc-CCccccceEeecH--------HHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHH
Confidence 3332223 36789964 45 5899998875 577766531 23356678888888888887533
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEeecC
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g 381 (419)
++ ...++++++.+++.+.|+++.....+ ....-|.++-+.+..... ..... ...+...+ .++||.+.+.
T Consensus 386 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~ 461 (504)
T PLN02760 386 ER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAEC-KKRGMLVRVA 461 (504)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHH-HhCCcEEEec
Confidence 22 23455555555666655543111111 112335666666632110 00000 22344444 5679998764
Q ss_pred CCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 382 IYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 382 ~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
. +.+|+++ ..++++|+++++++++++.+..
T Consensus 462 g-----~~lrl~Ppl~it~eeid~~~~~l~~al~~~~ 493 (504)
T PLN02760 462 G-----DNIMMSPPLIITPEEVDELISIYGKALKATE 493 (504)
T ss_pred C-----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 2 4689997 4799999999999999997663
No 280
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.84 E-value=5.2e-18 Score=158.37 Aligned_cols=324 Identities=15% Similarity=0.095 Sum_probs=209.0
Q ss_pred CCChHHHHHHHHHHHhCC---CCC-----CCCCC--CCCHHHHHHHHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHH
Q 014769 58 FRTAVEAEDAIVDAVRSG---KFN-----CYATN--SGIPPARRAIADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSV 126 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~---~~~-----~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~ 126 (419)
.+.++.+++++...+.+. ... ...+. .-+.++++.+++++ +.+ +..+| +++++++.+++.++..
T Consensus 12 ~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~----~~~-~~~~v~~~~gsgt~~~Ea~~~n 86 (360)
T PRK05355 12 AMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELL----NIP-DNYKVLFLQGGASLQFAMVPMN 86 (360)
T ss_pred CCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHh----CCC-CCcEEEEEcCCchHHHHHHHHh
Confidence 357899999998876321 111 11110 22234455555554 421 22345 5568889999999999
Q ss_pred hcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 127 LARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 127 l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
+..+|+++++...+.++. ...++..|.. ..+..++..+. .+..++++ .++++++.|.+++..+.||+..+ .+.
T Consensus 87 l~~~g~~~l~i~~G~fg~r~~~~a~~~g~~-~~~~~~~~~g~-~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~--~i~ 162 (360)
T PRK05355 87 LLGGGKKADYVDTGSWSKKAIKEAKKYGEV-NVAASSEDDGF-TYIPPLDEWQLSDDAAYVHYTSNETIDGTEFH--ELP 162 (360)
T ss_pred cCCCCCeEEEEECCHHHHHHHHHHHHhCCc-eEEecccccCC-CCCCChhhccCCCCCCEEEEccCCCcceEecC--ccc
Confidence 999999998887766653 5677778854 55554332332 33333434 67778899999999999999984 255
Q ss_pred HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC--ccc-hhhHHH
Q 014769 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG--IFQ-KSGIID 280 (419)
Q Consensus 204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--~~~-~~~~~~ 280 (419)
+| +|+++++|.+++. +.....+..+ + +++.|..|.++.+| +|+++++++.. ... .+...+
T Consensus 163 ~i------~g~l~vVDavss~----g~~~idv~~~---d--~~~~ssqK~lgP~G--lg~l~~s~~~l~~~~~~~~~~~~ 225 (360)
T PRK05355 163 DT------GDVPLVADMSSDI----LSRPIDVSKF---G--LIYAGAQKNIGPAG--LTIVIVREDLLGRALPSIPSMLD 225 (360)
T ss_pred cc------CCCcEEEEcCccc----cCccCCHHHc---c--EEEEeccccccCCc--eEEEEECHHHHhhcccCCChHHH
Confidence 55 7999999999987 3333334333 2 77888999987666 88888865210 000 001111
Q ss_pred HHH--hhhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC--CceEEEEeecCcc
Q 014769 281 SIK--DCLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKP--EGSMVTMVKLNPW 355 (419)
Q Consensus 281 ~l~--~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~~~~~ 355 (419)
... ......++++....+++.++|+..... .++.+.++.++..+.+++.|++++.+.....+ ..+..+.+.++..
T Consensus 226 ~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~l~~~~~~~~~~~~~~rs~~v~sf~~~~~ 305 (360)
T PRK05355 226 YKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDAIDSSDFYRNPVAPEDRSRMNVPFTLADE 305 (360)
T ss_pred HHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCChhhcCCcEEEEEcCCh
Confidence 110 111234678888888988888876556 68999999999999999999998532222121 2223444555532
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+..++...+ .++|+.+.+|.. ..+.+|+|+. .+.+|++.+++.|++++++.
T Consensus 306 -----~~~~~~~~~~-~~~Gi~~~~~~~--~~g~vRiS~~~~nt~eei~~l~~~l~~~~~~~ 359 (360)
T PRK05355 306 -----ELDKKFLAEA-KAAGLVGLKGHR--SVGGMRASIYNAMPLEGVQALVDFMKEFERRH 359 (360)
T ss_pred -----HHHHHHHHHH-HHCCCcccCCCC--ccCcEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 1234454554 567999866653 3578999994 57999999999999987653
No 281
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.83 E-value=1e-17 Score=153.94 Aligned_cols=285 Identities=19% Similarity=0.165 Sum_probs=191.8
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~ 159 (419)
+....|++.++++- ..++.+.++++++|+..++.++.++||.|++++..|.+.. ..++..|+++.++.
T Consensus 63 PT~~~lE~~~a~LE--------g~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d 134 (396)
T COG0626 63 PTRDALEEALAELE--------GGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVD 134 (396)
T ss_pred ccHHHHHHHHHHhh--------CCCcEEEecCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEEC
Confidence 45678888888875 4678999999999999999999999999999999998754 44466788877764
Q ss_pred ccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 160 LLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
- .+.+.+.+++. +++++|++-+|+||+..+.+ +.+|+++|+++|+++|+|..|....+.. ++ .+
T Consensus 135 ~-------~~~~~~~~~~~~~~tk~v~lEtPsNP~l~v~D---I~~i~~~A~~~g~~vvVDNTfatP~~q~----PL-~~ 199 (396)
T COG0626 135 P-------GDDEALEAAIKEPNTKLVFLETPSNPLLEVPD---IPAIARLAKAYGALVVVDNTFATPVLQR----PL-EL 199 (396)
T ss_pred C-------CChHHHHHHhcccCceEEEEeCCCCccccccc---HHHHHHHHHhcCCEEEEECCcccccccC----hh-hc
Confidence 2 24456666666 58999999999999999988 9999999999999999999998644321 22 33
Q ss_pred CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKL 315 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 315 (419)
+.+ |++.|.+|.++..+ .=.|.++++++ .+.+.+.... .+....++...+.+..-|+ -+.-+
T Consensus 200 GaD---IVvhSaTKyl~GHsDvl~G~v~~~~~-------~~~~~~~~~~~~~~G~~l~p~dA~l~lRGlk-----TL~~R 264 (396)
T COG0626 200 GAD---IVVHSATKYLGGHSDVLGGVVLTPNE-------ELYELLFFAQRANTGAVLSPFDAWLLLRGLR-----TLALR 264 (396)
T ss_pred CCC---EEEEeccccccCCcceeeeEEecChH-------HHHHHHHHHHHhhcCCCCCHHHHHHHHhccc-----hHHHH
Confidence 444 99999999977655 33454554442 3455543222 2334445555544444333 35666
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769 316 IDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 379 (419)
.++..++...+.+.|++.|.+..|..|. .|-.+.+.+... .+...|++.| +-..+..+
T Consensus 265 m~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~-----~~~~~f~~~L-~l~~~a~S 338 (396)
T COG0626 265 MERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNE-----EAAKKFLDSL-KLFKLAES 338 (396)
T ss_pred HHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCCh-----HHHHHHHHhC-CccEEecc
Confidence 6777888899999999887766555553 333444556531 1233344433 33333333
Q ss_pred cCCCCC----------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 380 PGIYVG----------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 380 ~g~~~~----------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
-|.... . ++-+|+|+|. |+++.+++.|++++.+
T Consensus 339 lGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGl--Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 339 LGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGL--EDVEDLIADLEQALAK 394 (396)
T ss_pred CCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHh
Confidence 332211 0 4679999987 3556666777776654
No 282
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=6.3e-18 Score=158.86 Aligned_cols=307 Identities=21% Similarity=0.252 Sum_probs=201.8
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP 139 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p 139 (419)
.++..+++.+.++++.+..+++ -..++++++++|+ +..+++.++++|.||.+++.++ .++||+|+++..
T Consensus 4 ~~e~~~~v~~~l~s~~~~~~g~--~~~~fE~~~a~~~--------g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~ 73 (363)
T PF01041_consen 4 TEEEIDAVLEVLRSGWLSTYGP--YVEEFEKEFAEYF--------GVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAY 73 (363)
T ss_dssp HHHHHHHHHHHHHHTCCSSSSH--HHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESS
T ss_pred CHHHHHHHHHHHHhCCccCCCH--HHHHHHHHHHHHh--------CCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCC
Confidence 3566678888888776544443 4579999999998 3578999999999999999998 468999999999
Q ss_pred CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
+|......+...|.++++++++++ .+.+|++.+++++++++++|++++.. |...+ +.+|.++|+++|++||+|
T Consensus 74 t~~~~~~ai~~~G~~pv~~Di~~~-~~~id~~~~~~~i~~~t~ai~~~h~~---G~~~d---~~~i~~~~~~~~i~lIeD 146 (363)
T PF01041_consen 74 TFPATASAILWAGAEPVFVDIDPE-TLNIDPEALEKAITPKTKAILVVHLF---GNPAD---MDAIRAIARKHGIPLIED 146 (363)
T ss_dssp S-THHHHHHHHTT-EEEEE-BETT-TSSB-HHHHHHHHHTTEEEEEEE-GG---GB------HHHHHHHHHHTT-EEEEE
T ss_pred cchHHHHHHHHhccEEEEEeccCC-cCCcCHHHHHHHhccCccEEEEecCC---CCccc---HHHHHHHHHHcCCcEEEc
Confidence 999999999999999999999764 67899999999999999999887753 33344 899999999999999999
Q ss_pred cccccccc-CCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-------
Q 014769 220 EVYGHLTF-GSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY------- 289 (419)
Q Consensus 220 e~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~------- 289 (419)
.+++.... .|. .+..+++ +.+.||+ |.+ +....|++++++ +++.++++.+.+..
T Consensus 147 ~a~a~g~~~~g~---~~G~~gd----~~~fSf~~~K~i--~~geGG~v~~~~-------~~~~~~~~~~~~~g~~~~~~~ 210 (363)
T PF01041_consen 147 AAQAFGARYKGR---PVGSFGD----IAIFSFHPTKII--TTGEGGAVVTND-------PELAERARALRNHGRSRDAFR 210 (363)
T ss_dssp -TTTTT-EETTE---ETTSSSS----EEEEESSTTSSS---SSS-EEEEEST-------HHHHHHHHHHTBTTEETSECS
T ss_pred cccccCceeCCE---eccCCCC----ceEecCCCCCCC--cCCCCeeEEecH-------HHHHHHhhhhhccCcCccccc
Confidence 99997532 332 2233332 6667875 663 444458888866 35677776654321
Q ss_pred -----------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-----eEEEEeecC
Q 014769 290 -----------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG-----SMVTMVKLN 353 (419)
Q Consensus 290 -----------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~-----g~~~~~~~~ 353 (419)
+..+.+....+..-| +.+++..++-+++.+.+.+.|..++++.....+.. .+.+.+.++
T Consensus 211 ~~~~~~~~g~n~rm~~~~AAigl~QL-----~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~ 285 (363)
T PF01041_consen 211 RYRHELPPGYNFRMSELQAAIGLAQL-----KRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLP 285 (363)
T ss_dssp TTEESSSS--B-B-BHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEET
T ss_pred cccccccCCcccccHHHHHHHHHHHH-----HHhhhhHHHHHHHHHHHHHHHhcCCCccccccccccccccccccccccc
Confidence 112222222222223 34666677777888888888988876532222222 112233444
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCC-C-C------C----------------CCeEEEEe--ecCHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIY-V-G------L----------------KNWLRIAF--CAEPSALKDGLGR 407 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~-~------~----------------~~~~Ris~--~~~~~~l~~~l~~ 407 (419)
+... .+..++.+.| ++.||.+.+... . . . ...+.+.+ ..++++++..++.
T Consensus 286 ~~~~---~~rd~l~~~L-~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~~~~lt~edv~~I~~~ 361 (363)
T PF01041_consen 286 DEAL---ADRDELVEAL-RARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPIHPRLTEEDVDYIAEA 361 (363)
T ss_dssp CCGC---STHHHHHHHH-HHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEHSTTSCHHHHHHHHHH
T ss_pred cccc---chHHHHHHHH-HHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcCCCCCCHHHHHHHhhc
Confidence 3210 1356666666 677999887652 1 0 0 12456665 3578999988887
Q ss_pred HH
Q 014769 408 MK 409 (419)
Q Consensus 408 l~ 409 (419)
|+
T Consensus 362 ir 363 (363)
T PF01041_consen 362 IR 363 (363)
T ss_dssp HH
T ss_pred cC
Confidence 74
No 283
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.83 E-value=9.9e-18 Score=148.06 Aligned_cols=322 Identities=17% Similarity=0.167 Sum_probs=222.0
Q ss_pred CCCChHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-
Q 014769 57 CFRTAVEAEDAIVDAVRSGK------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR- 129 (419)
Q Consensus 57 ~~~~~~~v~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~- 129 (419)
...-+|.+.+|+.+.++... -+--+.+.-.-+|++.+|++..+ +..++.++.--|+...+..|.+
T Consensus 183 gms~Hp~V~~A~~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK--------~aALlFsSCfVANDstLftLak~ 254 (570)
T KOG1360|consen 183 GMSRHPEVLDAMHDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQK--------EAALLFSSCFVANDSTLFTLAKK 254 (570)
T ss_pred cccCChHHHHHHHHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcC--------cceeeeeeeeeccchHHHHHHHH
Confidence 45578999999999887521 11122234446899999998732 3344445555565565555543
Q ss_pred -CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCccccCCCHHHHHH
Q 014769 130 -PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 130 -~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
||-.|......|-+.....+..+++-..+.. + |++.|++++.. .++.|.+.+.+..+|.+-| +++
T Consensus 255 lpgcei~SD~gNHASMI~GIrns~v~K~IFrH----N---D~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcp---lee 324 (570)
T KOG1360|consen 255 LPGCEIFSDEGNHASMIQGIRNSRVPKHIFRH----N---DLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCP---LEE 324 (570)
T ss_pred CCCcEEeccccchHHHHHHhhhcCCcceeecc----C---CHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCC---HHH
Confidence 7888888888887777777777776555443 2 67777776643 4678888999999999999 999
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK 283 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~ 283 (419)
|++++++||.+.++||++.-..|+..+...-..-+ ...-.|+.+++.|+||.-| ||+++.. .+++-++
T Consensus 325 lcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGcVG---GYIAat~--------~LvDmiR 393 (570)
T KOG1360|consen 325 LCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGCVG---GYIAATR--------KLVDMIR 393 (570)
T ss_pred HHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccccc---ceehhhh--------hHHHHHH
Confidence 99999999999999999998888754422111101 1112488999999999988 9999876 6899999
Q ss_pred hhh-cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 284 DCL-SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 284 ~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
.+. .+ +.+.++.....+.++++....+.-...+...+++..++++.|.++ |+. + .|....++-+++.+.
T Consensus 394 SyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~-GiP-V-i~~pSHIiPv~vgda----- 465 (570)
T KOG1360|consen 394 SYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL-GIP-V-IPNPSHIIPVRVGDA----- 465 (570)
T ss_pred HhcCceEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc-CCc-c-cCCCcceeeeeccCH-----
Confidence 885 22 223333333444444433222222344556677788899999887 787 3 455565665666432
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
..+.+..+.|+.+++|+|..-.+... ...+||++ ..+++-++.+++.+..++.++
T Consensus 466 ~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 466 ALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHHHHhcCeEEEeccCCcccccceeeecCCCCCCCHHHHHHHHHHHHHHHHHc
Confidence 13567788899999999987666554 35689988 468899999999999999875
No 284
>PRK07482 hypothetical protein; Provisional
Probab=99.83 E-value=2.3e-17 Score=158.75 Aligned_cols=355 Identities=14% Similarity=0.089 Sum_probs=214.8
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+...+|+.+|||..|.-.... -.-+|.+.+++.++++...+ +... ....+.+..+|+.+.+..+ .+.+.+++++
T Consensus 44 l~D~dG~~ylD~~sg~~~~~l-Gh~~p~v~~Av~~q~~~~~~--~~~~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~ 118 (461)
T PRK07482 44 ITDAQGRRYIDAFAGLYCVNV-GYGRTEVAEAIAEQAKELAY--YHTYVGHGTEASITLSKRIIDRAP--AGMSKVYYGL 118 (461)
T ss_pred EEECCCCEEEEcccchhhhcC-CCCCHHHHHHHHHHHHhcCc--cccccccCCHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence 334569999999998543321 23579999999999986431 1110 1123455556666654322 2346899999
Q ss_pred cHHHHHHHHHHHhc------C-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCC---cc---
Q 014769 115 GCKQAVEVILSVLA------R-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERN---WE--- 167 (419)
Q Consensus 115 g~~~al~~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~---~~--- 167 (419)
++++|++.+++... . ++ .+|+....+|++....+..... .+..++.+.... +.
T Consensus 119 sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 198 (461)
T PRK07482 119 SGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSE 198 (461)
T ss_pred chHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhhccCCCCCCCEEcCCCccccccccCCCH
Confidence 99999999998864 1 22 5789999999986433222111 111111111000 00
Q ss_pred -----cChHHHHHhhc---CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 168 -----VDLDAVEALAD---KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 168 -----~~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
.+++.+++.+. .+..+.+|..| +...|.. .|.+++++|.++|++||+++|.||++.+|...|..+. ...
T Consensus 199 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a-~~~ 277 (461)
T PRK07482 199 EQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFG-SDH 277 (461)
T ss_pred HHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCcchhh-HHh
Confidence 13466666663 13355667777 4445665 6889999999999999999999999999866654332 233
Q ss_pred cCCCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccc
Q 014769 238 FGSIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~ 308 (419)
++..+.++ +++|.+ ..|. ++|.+++++ ++.+.+... ...+++.++++..++.+.|+...
T Consensus 278 ~gv~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~~~ 345 (461)
T PRK07482 278 YGIEPDLI---TVAKGL-TSAYAPLSGSIVGE--------KVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILE 345 (461)
T ss_pred cCCCCCEE---EEcccc-ccCccccceeeecH--------HHHHHHhcccccCCccccCCCCCcCHHHHHHHHHHHHHHH
Confidence 34333444 467994 5574 899988865 466655421 22356778888888888887643
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEe
Q 014769 309 EDFFCKLIDTLRESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIV 378 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v 378 (419)
++. ..++.++..+++.+.|+ ++|.+. ....-|.+..+.+..... ..... ...+...+ .++||++
T Consensus 346 ~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~--~vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~ 419 (461)
T PRK07482 346 REN---LVGNAAEVGAYFRARLRAAFGDHPLVG--EVRGVGMLAAVEFVADRDDRTPFDPALKIGPQVSAAA-LERGVIA 419 (461)
T ss_pred hCC---HHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeeceeEEEEEeccCCCcCCCCChhhHHHHHHHHHH-HHCCcEE
Confidence 222 22333444444444443 343222 123446676777742110 00000 13445455 5689998
Q ss_pred ecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 379 TPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 379 ~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.++. ..+.+|+.+ ..++++|+++++.+.+++++..+
T Consensus 420 ~~~~---~~~~i~~~Ppl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 420 RAMP---HGDILGFAPPLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred ecCC---CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 6532 136789886 57999999999999999987643
No 285
>PRK07678 aminotransferase; Validated
Probab=99.83 E-value=3.2e-17 Score=157.46 Aligned_cols=353 Identities=13% Similarity=0.071 Sum_probs=209.9
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-... .-.-+|.+.+++.+++....... .. ...+....+++.+.+..+ ..+.++++++
T Consensus 41 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~--~~-~~~~~~~~lae~l~~~~~---~~~~v~f~~s 113 (451)
T PRK07678 41 VTDIQGNRYLDGMSGLWCVN-VGYGRKELAEAAYEQLKTLSYFP--LT-QSHEPAIKLAEKLNEWLG---GEYVIFFSNS 113 (451)
T ss_pred EEeCCCCEEEEccccHHhhc-CCCCCHHHHHHHHHHHHhcCccc--cc-cCCHHHHHHHHHHHHhCC---CCCEEEEeCC
Confidence 33456999999988843321 12357999999999987643211 11 112334445555544322 1358999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCccc------
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEV------ 168 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~------ 168 (419)
+++|++.+++.... +| .+|+....+|++....+..... .+..++. ...+..
T Consensus 114 GseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 191 (451)
T PRK07678 114 GSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPP--PDCYRMPGIESE 191 (451)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccccCCCCCCCEEeCC--CccccccccCCh
Confidence 99999999887642 23 5789999999986544432211 1111111 111111
Q ss_pred ---C---hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 169 ---D---LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 169 ---~---~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
+ ++.+++.+. .+..+.+|..| +.-.|. ..|.++++++.++|++||+++|+||++.+|...|..+ ....
T Consensus 192 ~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~ 270 (451)
T PRK07678 192 DIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKHGALLISDEVICGFGRTGKAF-GFMN 270 (451)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhcCCcCchhH-HHHh
Confidence 1 223455553 23455667777 444555 4789999999999999999999999999876555321 2223
Q ss_pred cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchH
Q 014769 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
++..+.++ +++|.++...+++|.+++++ ++++.+... ...+++.++++..++.+.|+...++
T Consensus 271 ~gv~PDiv---t~gK~lggG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~gnp~~~aaa~a~l~~l~~~ 339 (451)
T PRK07678 271 YGVKPDII---TMAKGITSAYLPLSATAVKK--------EIYEAFKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENE 339 (451)
T ss_pred cCCCCCEE---EeecccccCCcceeEEEEcH--------HHHHHHhccCcccccccCCCCCcCHHHHHHHHHHHHHHHhC
Confidence 33333344 57899544337999999976 577766531 2345677888888888888764322
Q ss_pred HHHHHHHHHHHHHHHHHHHh----hcCCCCCCCCCCCceEEEEeecCcccccCCC-C---HHHHHHHHHHhcCeEeecCC
Q 014769 311 FFCKLIDTLRESAEICYDGV----KEIPCISCPNKPEGSMVTMVKLNPWLLEDIN-D---DIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l----~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~-~---~~~~~~~ll~~~gv~v~~g~ 382 (419)
. ..++++++.+++.+.| ++++.+.. ...-|.++-+.+......... + ...+...+ .++||++.+..
T Consensus 340 ~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~--vrg~Gl~~~i~~~~~~~~~~~~~~~~a~~i~~~l-~~~Gv~~~~~g 413 (451)
T PRK07678 340 N---LIERSAQLGELLLEQLKEELGEHPLVGD--IRGKGLLVGIELVNDKETKEPADNDKVASVVAAC-KEKGLIIGKNG 413 (451)
T ss_pred C---HHHHHHHHHHHHHHHHHHHHhcCCCEEE--EEeeceEEEEEEecCCcccCcCchHHHHHHHHHH-HHCCcEEeecC
Confidence 2 2334444444444444 33432221 223455555656321100000 1 23445455 56799997642
Q ss_pred CC--CCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 383 YV--GLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 383 ~~--~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
.. ...+.+|+++. .++++|+++++++.++++++
T Consensus 414 ~~v~~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 414 DTVAGYNNVLTLSPPLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred ccccCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 11 22467999984 59999999999999999764
No 286
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.83 E-value=2.6e-17 Score=157.91 Aligned_cols=351 Identities=15% Similarity=0.106 Sum_probs=205.2
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
..+|+.+|||..|..... .-.-+|.+.+++.+++...... .|..+ +....+++.+.+.. +...+.++++++
T Consensus 49 D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~ql~~~~~~~~~~~~~----~~~~~lae~L~~~~--p~~~~~v~f~~S 121 (457)
T PRK05639 49 DVDGNVFIDFLAGAAAAS-TGYSHPKLVKAVQEQVALIQHSMIGYTHS----ERAIRVAEKLAEIS--PIENPKVLFGLS 121 (457)
T ss_pred eCCCCEEEECCcCHHhhc-cCCCCHHHHHHHHHHHHhccccccCccCC----HHHHHHHHHHHhhC--CCCcCEEEEeCc
Confidence 345889999988843221 1235789999999998753221 22222 33334444444322 222368999999
Q ss_pred HHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCC--cc----cCh---
Q 014769 116 CKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERN--WE----VDL--- 170 (419)
Q Consensus 116 ~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~--~~----~~~--- 170 (419)
+++|++.+++.... ...+|+....+|++....+... +. .+..++...... +. .+.
T Consensus 122 GsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 201 (457)
T PRK05639 122 GSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDEL 201 (457)
T ss_pred hHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCCCceEeCCCccccccccccccCCHHHH
Confidence 99999999988642 2367888899999865433221 11 122222211000 00 012
Q ss_pred -----HHHHHhh-----cCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 171 -----DAVEALA-----DKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 171 -----~~l~~~~-----~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+.+++.+ ..+..+.+|..| +...|. ..|.++++++.++|++||+++|+||++.++...|..+. ...+
T Consensus 202 ~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a-~~~~ 280 (457)
T PRK05639 202 INRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFA-SEWF 280 (457)
T ss_pred HHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHH-HHhc
Confidence 2344433 123455666777 455566 56899999999999999999999999998655554221 1222
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 318 (419)
+..++++ +++|.+ ..|+++|.+++++ ++++........+++.++++..++.+.|+....+. ..++
T Consensus 281 gv~PDiv---~~gK~l-~gG~pi~av~~~~--------~i~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~~---l~~~ 345 (457)
T PRK05639 281 EVKPDLI---IFGKGV-ASGMGLSGVIGRK--------ELMDLTSGSALLTPAANPVISAAAEATLEIIEEEN---LLKN 345 (457)
T ss_pred CCCCCEE---Eechhh-cCCCcceeEEehH--------HHHhhcCCCcccCCCcCHHHHHHHHHHHHHHHHcc---HHHH
Confidence 3223333 378995 4589999999865 45552211112345667777777777776533222 2233
Q ss_pred HHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769 319 LRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA 393 (419)
Q Consensus 319 ~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris 393 (419)
.+++.+++.+.|++ .+-+. ....-|.++.+.+.... .+.......+...+ .++|+++.+... ..+.+|+.
T Consensus 346 ~~~~g~~l~~~L~~l~~~~~~~~--~VrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~g~--~~~~lr~~ 420 (457)
T PRK05639 346 ALKVGEFIKKRLLEMKESFEVIG--DVRGKGLMIGVEIVKENGKPDPELTGKICWRA-FELGLILPSYGM--FGNVIRIT 420 (457)
T ss_pred HHHHHHHHHHHHHHHHHhCCCEE--eeccceeEEEEEEecCCCCCCHHHHHHHHHHH-HhCCeEEeecCC--CCCEEEEe
Confidence 33444444444443 32121 12344666666653211 00000123444444 567999976421 14789999
Q ss_pred e--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 394 F--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 394 ~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+ ..+++++++++++++++++...
T Consensus 421 Ppl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 421 PPLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred CCCccCHHHHHHHHHHHHHHHHHHH
Confidence 8 4699999999999999998764
No 287
>PLN02880 tyrosine decarboxylase
Probab=99.83 E-value=3.8e-17 Score=157.79 Aligned_cols=324 Identities=12% Similarity=0.059 Sum_probs=211.5
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCC-----CCcEEEcccHHHHHHHHHHHhcC-----------CCCeEEeeCCCCC
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLS-----ADDVYVTLGCKQAVEVILSVLAR-----------PGANVLLPRPGWP 142 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~g~~~al~~~~~~l~~-----------~gd~vlv~~p~~~ 142 (419)
.|...++..++++.+.+|+.+.+|.+-. ...-++|+|+|+++..++.+..+ +.-.|++.+-+|+
T Consensus 113 ~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~ 192 (490)
T PLN02880 113 SWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHS 192 (490)
T ss_pred ccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchH
Confidence 4444557789999999999998886532 13467889999998777765432 1124556778899
Q ss_pred CcHHHHhhcCCE---EEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769 143 YYEGIAQRKQVE---VRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (419)
Q Consensus 143 ~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (419)
++...+..+|+. ++.++++..+++.+|++.|++++.+. +.+|+.+-.+..||.+-| +++|.++|+++|
T Consensus 193 Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDp---l~eI~~i~~~~~ 269 (490)
T PLN02880 193 ALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDP---LLELGKIAKSNG 269 (490)
T ss_pred HHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCc---HHHHHHHHHHcC
Confidence 999999999985 67888765556789999999988531 334455566788999988 999999999999
Q ss_pred CeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc---
Q 014769 214 VMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY--- 289 (419)
Q Consensus 214 ~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~--- 289 (419)
+|+++|.+|+++....... ..+..+.. -.-+..+++|+ +.....+|++.+++.. .+...+.....+-
T Consensus 270 iwlHVDaA~gg~~~~~~~~~~~l~gie~--aDSit~d~HKw-l~~P~~~g~llvr~~~------~l~~~~~~~~~Yl~~~ 340 (490)
T PLN02880 270 MWFHVDAAYAGSACICPEYRHYIDGVEE--ADSFNMNAHKW-FLTNFDCSLLWVKDRN------ALIQSLSTNPEFLKNK 340 (490)
T ss_pred CEEEEehhhHHHHHhCHHHHHHhcCchh--cCEEEECchhh-cCCCccEEEEEEeCHH------HHHHHHccCHHHhcCc
Confidence 9999999999864321111 01111111 12455689998 5777889999997632 1222222111100
Q ss_pred ------------cCC---chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 290 ------------SDI---PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 290 ------------~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++. .......+-..++....+.+.++.++..++.+++.+.|.+.++++++.+|..++ +.++++.
T Consensus 341 ~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~~~~~~i-v~Fr~~~ 419 (490)
T PLN02880 341 ASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVTPRIFSL-VCFRLVP 419 (490)
T ss_pred cccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCceEE-EEEEEeC
Confidence 000 000011111123333357778888888899999999999888888665556554 4456643
Q ss_pred ccccCCC--C--HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhc
Q 014769 355 WLLEDIN--D--DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 355 ~~~~~~~--~--~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.... .. + ..++.+++.++..+.+.+ ..+....++|+++. +++++++.+++.|.+..+++..
T Consensus 420 ~~~~-~~~~~~~n~~l~~~l~~~g~~~v~~-t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~~ 487 (490)
T PLN02880 420 PKNN-EDNGNKLNHDLLDAVNSSGKIFISH-TVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLLG 487 (490)
T ss_pred CCCC-hhhHHHHHHHHHHHHHhCCCEEEEE-EEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 1100 00 0 134556665556666654 33444679999983 5679999999999998887654
No 288
>PRK07046 aminotransferase; Validated
Probab=99.83 E-value=1.8e-17 Score=158.79 Aligned_cols=345 Identities=14% Similarity=0.117 Sum_probs=204.8
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.-... .-..+|.+.+++.+++.......+. .+....+++.+.+.. ..+.+.++++++
T Consensus 71 D~DG~~yiD~~~g~g~~~-lGh~~p~i~~Av~~q~~~~~~~~~~-----~~~~~~lAe~l~~~~----~~~~v~F~nSGt 140 (453)
T PRK07046 71 DVDGHRYDDFCLGDTGAM-FGHSPAPVARALAEQARRGLTTMLP-----SEDAAWVGEELARRF----GLPYWQVATTAT 140 (453)
T ss_pred eCCCCEEEEecccccccc-cCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHHh----CCCEEEEECCHH
Confidence 345888999987743221 1235799999999999875432222 244555666555432 257899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc--CCEEEE---E-ec----cCC---CCcccChHHHHHhhcCCcc
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK--QVEVRH---F-DL----LPE---RNWEVDLDAVEALADKNTA 182 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~--g~~~~~---~-~~----~~~---~~~~~~~~~l~~~~~~~~~ 182 (419)
+|.+.+++.... .| ++|+....+|+++....... +..... . .. ... -.| -|++.+++.+..+..
T Consensus 141 EA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~v 219 (453)
T PRK07046 141 DANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTRVVEF-NDLAALEAALADGDV 219 (453)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccccCceEeeCC-CCHHHHHHHhCCCCe
Confidence 999999987643 23 78999999999874322110 000000 0 00 000 001 168888888864455
Q ss_pred EEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 183 AMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 183 ~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
+.+|+.| ....| ...+.++++++.++|+++|+++|+||++. |..+-.... ..++..+.++ +++|.+ ..|++
T Consensus 220 Aavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~t-fr~g~Gg~~--~~~gv~PDi~---t~gK~l-ggG~P 292 (453)
T PRK07046 220 AAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHT-ISSGPGGYT--RAHGLEPDFL---VVGKPI-AGGVP 292 (453)
T ss_pred EEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEcccc-CccCCcchh--HHhCCCccce---eehhhh-cCCCc
Confidence 6677777 33334 45677899999999999999999999997 322111111 1122222233 578995 56899
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhh----------hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDC----------LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 329 (419)
+|.+++++ ++++.+... ...+++.++++..++.+.|+... .+.+++..+.-...++.+.+.
T Consensus 293 i~av~g~~--------~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~~~~g~~l~~~L~~l 364 (453)
T PRK07046 293 CAVYGFSA--------ELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHMLALAARLAAGLRAV 364 (453)
T ss_pred ceeeeehH--------HHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 99999876 577776521 12255678888888877776532 233333333333333334333
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccccCC------CC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDI------ND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSA 400 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~------~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~ 400 (419)
+.+. ++.....-.+. .+.+.+........ .+ ...+...+ .++||++.|. .+.+++++..++++
T Consensus 365 ~~~~-~~~~~v~g~G~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~~~~~p~~t~~d 436 (453)
T PRK07046 365 IARH-GLPWHVTRVGA-RVEFQFAPTPPRNGAEAAAALDPELEAALHLYL-LNRGVLITPF-----HNMMLVCPATTAAD 436 (453)
T ss_pred HHhC-CCCeEEEEeCc-EEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHH-HHCCCEEecc-----cCcEEEeCCCCHHH
Confidence 3334 22211122223 33333321100000 01 12344445 4579999873 24678888899999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014769 401 LKDGLGRMKAFCQRHT 416 (419)
Q Consensus 401 l~~~l~~l~~~~~~~~ 416 (419)
|+++++++++++++..
T Consensus 437 id~~~~~~~~~l~~~~ 452 (453)
T PRK07046 437 VDRLVAAFDACLGELL 452 (453)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 289
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=4.2e-17 Score=156.72 Aligned_cols=362 Identities=11% Similarity=0.024 Sum_probs=216.1
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHH
Q 014769 21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIA 94 (419)
Q Consensus 21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia 94 (419)
....|.+++.+-... ....|+|--.. -..++.+++++...+.+....+ |+......++++...
T Consensus 18 ~d~~~~~~i~~e~~~-----q~~~l~liase------n~~s~~v~~a~~s~~~~ky~~G~~g~r~~~G~~~~d~lE~~~~ 86 (475)
T PLN03226 18 VDPEIADIIEKEKRR-----QWKGLELIASE------NFTSRAVMEALGSCLTNKYSEGLPGARYYGGNEYIDQIETLCQ 86 (475)
T ss_pred cCHHHHHHHHHHHHH-----HHcCeeEecCC------ccCCHHHHHHHhhHHhccccCCCCCCcCcCCChhHHHHHHHHH
Confidence 456677777643332 34456664443 2357888898888874322122 333333445554333
Q ss_pred HHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCCeEEeeCC---CCCCcHHHH---hhcCCEEE----EEecc
Q 014769 95 DYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGANVLLPRP---GWPYYEGIA---QRKQVEVR----HFDLL 161 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd~vlv~~p---~~~~~~~~~---~~~g~~~~----~~~~~ 161 (419)
+...+.++ ...+.+.+ .++++.|+..++.++++|||+|+..+. +|..+.... ...+.... .+.++
T Consensus 87 ~~~~~~f~--~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~~~~~~~~y~~~ 164 (475)
T PLN03226 87 KRALEAFR--LDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATSIYFESMPYRLD 164 (475)
T ss_pred HHHHHHhC--CCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccceEEEEeeeeeec
Confidence 33333333 23334333 478899999999999999999998553 333322111 11112211 33444
Q ss_pred CCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccC
Q 014769 162 PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFG 239 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~ 239 (419)
+ .+..+|++.|++.+.. +++.| ++..++ +|...+ +++|.++|+++|+++++|++|..........+ ++.
T Consensus 165 ~-~~g~iD~d~Le~~l~~~~pklI-v~~~S~-~s~~~D---~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~~p~~--- 235 (475)
T PLN03226 165 E-STGLIDYDKLEKKAMLFRPKLI-IAGASA-YPRDWD---YARMRKIADKVGALLMCDMAHISGLVAAQEAASPFE--- 235 (475)
T ss_pred C-CCCCcCHHHHHHHHhhcCCeEE-EEecCc-CCCccC---HHHHHHHHHHcCCEEEEEchhhhCcccCCCCCCCCC---
Confidence 3 3457999999998864 45544 443444 677777 77899999999999999999987655433221 121
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCC-cc-----chhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNG-IF-----QKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-~~-----~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
...++++|++|++ .|.+.|++++++... .. ...++.+.++... .+.++++.....++..+++......
T Consensus 236 --~~Div~~t~hK~L--~GP~Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~ 311 (475)
T PLN03226 236 --YCDVVTTTTHKSL--RGPRGGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPE 311 (475)
T ss_pred --CCeEEEecCcccc--cCCCceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHHhCcC
Confidence 1238889999985 344458888854210 00 0001222222221 2334455555556666666543344
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----C
Q 014769 312 FCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----L 386 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~ 386 (419)
.++.++++.++.+.+.+.|.+. |+.++........+++.+.... .+..++ ...|++.||.+..+.-++ .
T Consensus 312 ~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~g----i~~~~~-~~~L~~~~I~~nk~~~p~~~~~~~ 385 (475)
T PLN03226 312 FKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLG----LTGSRV-EKVLDLAHITLNKNAVPGDSSALV 385 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCC----CCHHHH-HHHHHHCCCEECCCCCCCCcccCC
Confidence 5677889999999999999885 8874432233456667774321 134444 455578999998765332 2
Q ss_pred CCeEEEEe------ecCHHHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAF------CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 387 ~~~~Ris~------~~~~~~l~~~l~~l~~~~~~ 414 (419)
++.+|++. +.++++++++.+.|.++++.
T Consensus 386 ~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 386 PGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred CCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 46789865 35789999999999999873
No 290
>PRK05965 hypothetical protein; Provisional
Probab=99.82 E-value=1.6e-17 Score=159.81 Aligned_cols=354 Identities=14% Similarity=0.119 Sum_probs=213.8
Q ss_pred hhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 35 SVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 35 ~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
.+...+|+.+|||..|..... .-.-+|.+.+++.+++....+ ..+. ....+.+..+++.+.+.. +.+.+.++++
T Consensus 39 ~l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~ 113 (459)
T PRK05965 39 TLTDASGHQLLDAFAGLWCVN-VGYGQESIVEAAAEQMRELPYATGYF--HFGSEPAIRLAAKLAERA--PGSLNHVYFT 113 (459)
T ss_pred EEEECCCCEEEECcccHHhcc-CCCCCHHHHHHHHHHHHhcCCccccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEe
Confidence 344456999999988843321 123579999999999876432 1110 011234445555554422 2234689999
Q ss_pred ccHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CC------------EEEEEeccCCCC--cccC-
Q 014769 114 LGCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QV------------EVRHFDLLPERN--WEVD- 169 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~------------~~~~~~~~~~~~--~~~~- 169 (419)
+++++|++.+++.... ++ .+|+....+|++....+... +. .+..++...... +.-+
T Consensus 114 ~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (459)
T PRK05965 114 LGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDP 193 (459)
T ss_pred CChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcccCCCCCCCEEcCCCcccccccCCCh
Confidence 9999999999987542 22 57999999999864322211 11 011222110000 0112
Q ss_pred -------hHHHHHhhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 170 -------LDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 170 -------~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
++.+++.+.. +..+.+|..| +...|. +.|.++++++.++|++||+++|.||++.+|...|..+ ....
T Consensus 194 ~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~ 272 (459)
T PRK05965 194 QAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLF-ACEA 272 (459)
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEechhccCccCchhh-hHhh
Confidence 2456666642 3445566666 555565 5789999999999999999999999999986666432 2233
Q ss_pred cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------h-hccccCCchHHHHHHHHHHcccc
Q 014769 238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------C-LSIYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~l~~~~ 308 (419)
++..+.++ +++|.+ ..| +++|.+++++ ++.+.+.. . ...+++.++++..++.+.|+...
T Consensus 273 ~gv~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~l~ 340 (459)
T PRK05965 273 EGVVPDLM---TVAKGL-TSGYVPMGAVLMSD--------HVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH 340 (459)
T ss_pred cCCCCCeE---Eechhh-ccCCcceeEEEEcH--------HHHHHHhccccccccccccCCCCCCHHHHHHHHHHHHHHH
Confidence 34333344 468995 567 5999999976 56666642 1 22356778888888888776533
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCccc-c-cCCC---C-HHHHHHHHHHhcCeEee
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWL-L-EDIN---D-DIEFALKLAKEESVIVT 379 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~-~-~~~~---~-~~~~~~~ll~~~gv~v~ 379 (419)
++. ..++.++..+++.+.|+++ |.+. ....-|+++-+.+.... . .... . ...+...+ .++||++.
T Consensus 341 ~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gll~~ 414 (459)
T PRK05965 341 EGG---LLANGQKAGPRFAAGLDALRAHPLVG--DVRGRGLLGALELVADKATKTPFDAALDPADRIFDRA-YANGLVFR 414 (459)
T ss_pred hcc---HHHHHHHHHHHHHHHHHhhccCCCEE--EEeecceEEEEEEeccccccCCCCchhHHHHHHHHHH-HhCCeEEE
Confidence 222 2334455555555555543 3222 12334666666663211 0 0000 0 12344444 56899997
Q ss_pred cCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 380 PGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 380 ~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.. ...+|+.+ ..++++++++++++.+++.+..
T Consensus 415 ~~g----~~~i~~~PpL~it~~ei~~~~~~l~~~l~~~~ 449 (459)
T PRK05965 415 AFG----DGVLGFAPALCCTEGEFDLIFERTRKTLDDVL 449 (459)
T ss_pred ecC----CcEEEEECCCcCCHHHHHHHHHHHHHHHHHHh
Confidence 632 46789887 4799999999999999998763
No 291
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=1.5e-17 Score=159.50 Aligned_cols=352 Identities=12% Similarity=0.015 Sum_probs=212.4
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-... .-.-+|.+.+++.+++....... ...-..+.+..+++.+.+..+ ...+.++++++
T Consensus 48 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~~~--~~~~~~~~~~~lAe~L~~~~p--~~~~~v~f~~s 122 (453)
T PRK06943 48 LYDRDGRRYLDAISSWWVNL-FGHANPRINAALKDQLDTLEHAM--LAGCTHEPAIELAERLAALTG--GTLGHAFFASD 122 (453)
T ss_pred EEeCCCCEEEEcchHHHHhc-CCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCC
Confidence 33446889999988832211 12357999999999987642111 000112344555555544322 12258999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCC--cc-----
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERN--WE----- 167 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~~----- 167 (419)
+++|++.+++.... +| .+|+....+|++....+..... .+..++...... +.
T Consensus 123 GseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (453)
T PRK06943 123 GASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAAD 202 (453)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcccccCCCCCEEECCCCccccccCCCHHH
Confidence 99999999988621 23 6799999999886432222111 111222111000 00
Q ss_pred ---cChHHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 168 ---VDLDAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 168 ---~~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
-+++.+++.+.. +..+.+|..| +...|. ..|.++++++.++|++||+++|.||++.++...|..+ ....++
T Consensus 203 ~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TG~GRtG~~f-a~~~~g 281 (453)
T PRK06943 203 VAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIADEIAVGCGRTGTFF-ACEQAG 281 (453)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCCCcchh-HHHhCC
Confidence 123556666642 3445566666 555666 5799999999999999999999999999886555432 222333
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
..+.++ +++|.++ .| +++|.+++++ ++.+.+... ...+++.++++..++.+.|+...++.
T Consensus 282 v~PDiv---t~gKgl~-gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~i~~~~ 349 (453)
T PRK06943 282 VWPDFL---CLSKGIS-GGYLPLSLVLSRD--------AIFAAFYDDDVTRGFLHSHSYTGNPLACRAALATLDLFAEDD 349 (453)
T ss_pred CCCCeE---eeehhhc-cCcccceEEEEcH--------HHHHhhcccCccCCccCCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 333445 4679954 68 5999999976 566666421 22356678888888888877643222
Q ss_pred HHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCC
Q 014769 312 FCKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKN 388 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~ 388 (419)
..++.+++.+++.+.|++ .+.+.. ...-|+++-+.+.............+...+ .++||++.+.. +
T Consensus 350 ---l~~~~~~~G~~l~~~L~~l~~~~~v~~--vrG~Gl~~gvel~~~~~~~~~~~~~i~~~~-~~~Gll~~~~g-----~ 418 (453)
T PRK06943 350 ---VLARNARKSARLRAALAPLAAHPQVRH--LRQRGTIFAFDVALDGDAARTFSRRFFEAA-LERELLLRPIG-----T 418 (453)
T ss_pred ---HHHHHHHHHHHHHHHHHHHhcCCCEEe--EeccccEEEEEEccCCCcchHHHHHHHHHH-HHCCcEEEecC-----C
Confidence 233444444445554443 343331 234466666666421100000123445555 56899997642 4
Q ss_pred eEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 389 WLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 389 ~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.+|+++ ..++++|++++++|.+++++..
T Consensus 419 ~l~~~Ppl~it~~eid~~~~~l~~al~~~~ 448 (453)
T PRK06943 419 TVYLMPPYVLDDDEIAWLAERTRATLDATL 448 (453)
T ss_pred EEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 689996 5799999999999999998764
No 292
>PLN02590 probable tyrosine decarboxylase
Probab=99.82 E-value=6.3e-17 Score=156.22 Aligned_cols=327 Identities=14% Similarity=0.108 Sum_probs=212.8
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCCC-----CCcEEEcccHHHHHHHHHHHhcC-----------CCCeEEeeCCCC
Q 014769 78 NCYATNSGIPPARRAIADYLSRDLPYKLS-----ADDVYVTLGCKQAVEVILSVLAR-----------PGANVLLPRPGW 141 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~g~~~al~~~~~~l~~-----------~gd~vlv~~p~~ 141 (419)
..|...++..++++.+.+|+.+.+|.+-. ...-++++|+|+++..++.+... +.-.|++.+.+|
T Consensus 160 ~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH 239 (539)
T PLN02590 160 FTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTH 239 (539)
T ss_pred CCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCch
Confidence 35555668899999999999998886532 13467789999988777665432 112455667889
Q ss_pred CCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 142 PYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 142 ~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
+++...+..+|+ .++.++++...++.+|++.|++++.+. +.+|+.+-.+..||.+=| +++|.++|+++
T Consensus 240 ~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDp---l~~Ia~i~~~~ 316 (539)
T PLN02590 240 SSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDP---LVPLGNIAKKY 316 (539)
T ss_pred HHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCC---HHHHHHHHHHh
Confidence 999999999998 477888765556789999999988542 334555566778999877 99999999999
Q ss_pred CCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---h--
Q 014769 213 RVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---L-- 286 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~---~-- 286 (419)
|+|+++|.+|+++..-...... +..+... .-| ..+++|+ +.....+|.+.++++.. +.+.+... .
T Consensus 317 g~WlHVDaA~GG~al~~~~~r~~~~Gie~A-DSi-t~D~HK~-l~~p~~cg~llvr~~~~------l~~a~~~~~~YL~~ 387 (539)
T PLN02590 317 GIWLHVDAAYAGNACICPEYRKFIDGIENA-DSF-NMNAHKW-LFANQTCSPLWVKDRYS------LIDALKTNPEYLEF 387 (539)
T ss_pred CCeEEEecchhhhhhcChhhHHHhcCCccC-CEE-EECchhh-cCcCcCEEEEEecCHHH------HHHHhhcCHHHhCC
Confidence 9999999999986532221111 1122111 123 3379998 57778899999887431 22222110 0
Q ss_pred ------------ccccCCc-hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC
Q 014769 287 ------------SIYSDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 287 ------------~~~~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~ 353 (419)
..+...+ ......+-..|+....+.++++.++..+..+++.+.|++.|+++++.+|.-+..+ +++.
T Consensus 388 ~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~~~~l~iVc-Fr~~ 466 (539)
T PLN02590 388 KVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVTTRYFSLVC-FRLA 466 (539)
T ss_pred cccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCceEEEE-EEec
Confidence 0000000 1112222233333335788999999999999999999998889866555555443 4443
Q ss_pred cccccCC---CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhcc
Q 014769 354 PWLLEDI---NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 354 ~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
....... .-..++.+++.+...+.+.+ .......++|++++ +++++|+.+++.|.+...++.+.
T Consensus 467 ~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~-t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a~~~~~~ 536 (539)
T PLN02590 467 PVDGDEDQCNERNRELLAAVNSTGKIFISH-TALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHASKFTRN 536 (539)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCCEEEEe-eEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHhccc
Confidence 2100000 00235555664444444444 43444568999983 57899999999999998887654
No 293
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.82 E-value=7.4e-18 Score=157.47 Aligned_cols=281 Identities=14% Similarity=0.106 Sum_probs=179.8
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~ 159 (419)
+...+|++.++++. +.+..+++++++.|+..++.++.++||+|+++.+.|.... ..+...|+++.+++
T Consensus 64 P~~~~lE~~la~le--------g~~~av~~sSG~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd 135 (384)
T PRK06434 64 PTVQAFEEKYAVLE--------NAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYID 135 (384)
T ss_pred hhHHHHHHHHHHHh--------CCCcEEEeCCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEEC
Confidence 34578888898887 3357888999999999999999999999999988776543 55677899999888
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
+++.+.+.++ .+++++|++.+|+|||+.+.+ +++|.++|++++ +++|.++.... .+ .++. .+
T Consensus 136 ~~~~~~~~l~--------~~~tklv~~e~~snpt~~v~D---i~~I~~la~~~~--lvVD~t~~s~~-~~---~pl~-~g 197 (384)
T PRK06434 136 TDRLNSLDFD--------PSNYDLIYAESITNPTLKVPD---IKNVSSFCHEND--VIVDATFASPY-NQ---NPLD-LG 197 (384)
T ss_pred CCChhheeec--------CCCeeEEEEEcCCCCCceeec---HHHHHHHHHHcC--eEEECCCCCcc-cC---Cchh-cC
Confidence 6532222222 125789999999999999887 999999999998 46699975321 11 1222 23
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
. .+++.|.+|.++.+| .-.|.++++++ ++.+.++... ......++...+.+..-| +.+..+.+
T Consensus 198 a---Divv~S~tK~i~G~~d~~gG~vv~~~~-------~~~~~~~~~~~~~G~~~~~~~A~l~~~gL-----~tL~~R~~ 262 (384)
T PRK06434 198 A---DVVIHSATKYISGHSDVVMGVAGTNNK-------SIFNNLVERRKTLGSNPDPIQAYLALRGL-----KTLGLRME 262 (384)
T ss_pred C---CEEEeecccccCCCCCceEEEEecCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhCC-----CcHHHHHH
Confidence 3 388889999976655 44566665442 4556555443 223333433322222222 34677777
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC---
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPE----------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--- 384 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--- 384 (419)
+.+++...+.+.|+.+|.+..|..|. .|-.+.+.++.. .....|++.| +-..+.++-|...
T Consensus 263 r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l~~~-----~~~~~f~~~l-~l~~~~~slG~~~sl~ 336 (384)
T PRK06434 263 KHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSM-----EDVHKFIRNL-EIPMVAASLGGVESLI 336 (384)
T ss_pred HHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEECCH-----HHHHHHHHhC-CcceEccCCCCCCeee
Confidence 88888999999999888776555554 233445556421 1233444433 2222222222210
Q ss_pred -------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 385 -------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 385 -------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
+. ++.+|||+|.+ +.+.+++.|.+++.
T Consensus 337 ~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlE--d~~dLi~dl~~Al~ 383 (384)
T PRK06434 337 TLPVETSHSSLSPEERERLGISDNLVRFSIGIE--DIDDLIKDIENALS 383 (384)
T ss_pred ECCCccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHhc
Confidence 00 35799999974 56667777777664
No 294
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.82 E-value=1.4e-17 Score=169.61 Aligned_cols=308 Identities=11% Similarity=0.059 Sum_probs=213.3
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH----HHHHHHHHHhcCC-CC----eEEeeCCCCCCcHHHHhhcCC
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK----QAVEVILSVLARP-GA----NVLLPRPGWPYYEGIAQRKQV 153 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~----~al~~~~~~l~~~-gd----~vlv~~p~~~~~~~~~~~~g~ 153 (419)
.+|+.++...+.+++.+..|. +.|.++++++ ++++.+++.+.++ || .|+++...|......+...|+
T Consensus 563 ~~g~~~~~~~~r~~la~i~g~----~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~~~G~ 638 (993)
T PLN02414 563 AQGYQEMFEDLGDLLCEITGF----DSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAAMCGM 638 (993)
T ss_pred HHHHHHHHHHHHHHHHHHhCC----CeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHHHCCC
Confidence 356655555555555554443 8999999999 8999999998765 88 899999999988888888999
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI 230 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 230 (419)
+++.++++. +..+|+++|++++++ ++++|++++|+|-+|...+ +++|+++|+++|+++++|.++.....
T Consensus 639 ~vv~v~~d~--~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~---I~eI~~iah~~Galv~vDgAq~~a~~--- 710 (993)
T PLN02414 639 KIVVVGTDA--KGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEG---IDEICDIIHDNGGQVYMDGANMNAQV--- 710 (993)
T ss_pred EEEEeccCC--CCCcCHHHHHHHHhccCCCeEEEEEECCCccccccch---HHHHHHHHHHcCCEEEEEecCHHhcc---
Confidence 999999853 347999999999984 6788999999999999988 99999999999999999999965221
Q ss_pred CCCCccccCCCCcEEEEecCCCcCCC----CCceeEEEEeeCCCCccchhhHHHHHHh------------hhcc-ccC--
Q 014769 231 PYTPMGLFGSIVPVITLGSISKRWLV----PGWRFGWLVTNDPNGIFQKSGIIDSIKD------------CLSI-YSD-- 291 (419)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~l~~------------~~~~-~~~-- 291 (419)
.......++.+ ++++|.+|+|+. .|..+|++.++.. +...+-. .... .++
T Consensus 711 ~l~~p~~~GaD---~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--------L~p~lPg~~v~~~~~~~~r~~~s~iGt~~ 779 (993)
T PLN02414 711 GLTSPGFIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKH--------LAPFLPSHPVVPTGGIPRPEKTQPLGTIS 779 (993)
T ss_pred CcCCccccCCC---EEEecCCccCCcCcccCCCCeeeEEEchh--------hcccCCCCccccCCCcccccCCCCcCCcc
Confidence 11222344444 888899997663 3566999988652 1111110 0100 112
Q ss_pred ----CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE--EEEeecCcccccCCCCHHH
Q 014769 292 ----IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM--VTMVKLNPWLLEDINDDIE 365 (419)
Q Consensus 292 ----~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--~~~~~~~~~~~~~~~~~~~ 365 (419)
.+.....++..++.....+.+.+..++...+.+++.+.|.+..++. +..|.+.+ -+.+.++..+-....+..+
T Consensus 780 ~a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~-~~~~~~~~~hEfv~~~~~l~~~~g~~~~d 858 (993)
T PLN02414 780 AAPWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVL-FRGKNGTCAHEFIIDLRPFKNTAGIEPED 858 (993)
T ss_pred chhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCcc-ccCCCCCeeeeEEEeccccccccCCCHHH
Confidence 1223333444555554568888889999999999999998743443 22333321 1223343111001124578
Q ss_pred HHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 366 FALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 366 ~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.++|+ ++||.... ..|-..+++|+++. .+++|||++++.+..+..+..
T Consensus 859 i~krL~-d~Gihapt-~~~pv~~~lmiepTE~~skeelDrf~~al~~i~~e~~ 909 (993)
T PLN02414 859 VAKRLM-DYGFHAPT-MSWPVPGTLMIEPTESESKAELDRFCDALISIREEIA 909 (993)
T ss_pred HHHHHH-HcCcEEee-eccccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHHH
Confidence 888886 88997644 33545789999994 588999999999998887654
No 295
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.82 E-value=5.2e-18 Score=144.38 Aligned_cols=328 Identities=16% Similarity=0.191 Sum_probs=214.0
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
..+||..... ..+..+++++|.++....+. |+......+|++.+|+... +...+|+++|++..+..
T Consensus 22 ~~vDLRSDTv-----T~PTdeMr~am~eA~vgDdV--yGeD~tt~rLE~~vA~l~G-------KEAgLFv~SGTmgNlla 87 (384)
T KOG1368|consen 22 RSVDLRSDTV-----TVPTDEMRRAMAEASVGDDV--YGEDPTTNRLEQRVAELFG-------KEAGLFVPSGTMGNLLA 87 (384)
T ss_pred eccccccccc-----cCChHHHHHHHhhcccCccc--ccCCccHHHHHHHHHHHhC-------ccceeeecccccccHHH
Confidence 4456665543 34568889999888665555 5554566899999999983 34456777777776666
Q ss_pred HHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--------CccEEEEeCCCC
Q 014769 123 ILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--------NTAAMVIINPGN 191 (419)
Q Consensus 123 ~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--------~~~~v~i~~p~n 191 (419)
++..+-++|.+|++.+-+|.... .+....|+.+.. +.++++..+++++++++++. -++++.+.|-+|
T Consensus 88 Im~Hc~~rg~eii~gd~~HI~~~E~gg~s~l~gv~~~t--v~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~ 165 (384)
T KOG1368|consen 88 IMVHCHQRGSEIIVGDRAHIHRYEQGGISQLAGVHVRT--VKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHN 165 (384)
T ss_pred HHHHhcCCCceEEeccchheeehhccChhhhccceeEe--eeeCCCCeeeHHHHHHhhcCCCCCccCCCceEEEeecccc
Confidence 66667779999999988875322 233444555554 44666778999999999873 357788888866
Q ss_pred ccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769 192 PCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270 (419)
Q Consensus 192 ptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 270 (419)
.+| .++|.+++.++.++|+++++-+..|.+--+-.--. .-.++..+......+.+ +|||.++.| +|-+++.+.
T Consensus 166 ~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAava-sgV~vk~i~~~fDSVsi-CLSKglgAP---VGSViVG~k- 239 (384)
T KOG1368|consen 166 NCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVA-SGVPVKKICSAFDSVSI-CLSKGLGAP---VGSVIVGSK- 239 (384)
T ss_pred ccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHH-cCCCHHHHHHhhhhhhh-hhhccCCCC---cccEEEccH-
Confidence 555 99999999999999999999999998765421111 11222222111111222 789997555 788777552
Q ss_pred CccchhhHHHHHHhhh-ccccCC--chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceE
Q 014769 271 GIFQKSGIIDSIKDCL-SIYSDI--PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSM 346 (419)
Q Consensus 271 ~~~~~~~~~~~l~~~~-~~~~~~--~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~ 346 (419)
+++++-+.++ .+.++. +.+..+|+.-+|++ .+. ....-+++...+.+.+...+++. +..| ....
T Consensus 240 ------~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~----~~~-~L~~dHk~A~~lAe~~~~~~~i~-v~v~a~etN 307 (384)
T KOG1368|consen 240 ------DFIDKARHFRKALGGGMRQSGVLAAAALVALDE----NVP-LLRADHKRAKELAEYINTPEEIR-VEVPAVETN 307 (384)
T ss_pred ------HHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhc----chH-HHHHHHHHHHHHHHHhcccccee-eecchhhcc
Confidence 4666655553 223333 33333333334433 122 34455667777788887765666 3344 5566
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHH-HHHH
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMK-AFCQ 413 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~-~~~~ 413 (419)
++.+.+.... .+..++...+ +++||.+.++.. ..+|+.+. .++++++.++..+. .++.
T Consensus 308 iv~~~l~q~~----~~~~~l~~~~-~k~gi~lm~~~s----~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~ 368 (384)
T KOG1368|consen 308 IVNMVLCQAR----LTAEELCKFL-EKNGILLMGGAS----RRIRIVLHHQVTDEDVEYVKSVLSKKFLK 368 (384)
T ss_pred eeeeeccccc----CCHHHHHHHH-HHCCeEEeeccc----cceEEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 7776664432 2677887776 778999998764 34799984 58999999999994 4443
No 296
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.82 E-value=1.1e-17 Score=155.59 Aligned_cols=330 Identities=12% Similarity=0.068 Sum_probs=206.2
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
..+|+.++||..|.-... .-.-+|.+.+++.+++++.... .|.. ....++.+.++++. ..+.++++++
T Consensus 20 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~~~~~~~~~~~-~~~~~la~~l~~~~--------~~~~v~~~~S 89 (364)
T PRK04013 20 DSQGRRYLDLIAGIGVNV-LGHNHPEWVEEMSEQLEKLVVAGPMFEH-EEKEEMLEELSKWV--------NYEYVYMGNS 89 (364)
T ss_pred ECCCCEEEEcccChhhcc-CCCCCHHHHHHHHHHHHhcCCccCCcCC-HHHHHHHHHHHhhc--------CCCEEEEeCc
Confidence 346899999988743221 1235688999999998764221 2222 22234455555443 2368999999
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCCEE----EEEeccCCC--CcccChHHHHHhhcCCccEEEEe
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQVEV----RHFDLLPER--NWEVDLDAVEALADKNTAAMVII 187 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~~~----~~~~~~~~~--~~~~~~~~l~~~~~~~~~~v~i~ 187 (419)
+++|++.+++.... +| ++|+....+|++....+....... ..-+..++- ..-.|.+.+++.+.++..++++.
T Consensus 90 GseA~e~Alklar~~~gr~~Ii~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvivE 169 (364)
T PRK04013 90 GTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIFE 169 (364)
T ss_pred hHHHHHHHHHHHHHHhCCCEEEEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEEEc
Confidence 99999999998643 45 889999999988654333211000 000000000 00126778888887666665555
Q ss_pred CCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 188 NPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 188 ~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
..+...|. ..|.++++++.++|+++|+++|+||++.++ ..|..+ ....++-.++++ +++|.++ .|+++|.++.
T Consensus 170 pi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEv~tG~-RtG~~~-a~~~~gv~PDiv---~~gK~lg-gG~P~~a~~~ 243 (364)
T PRK04013 170 PIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFL-AIEHYKVEPDIV---TMGKGIG-NGVPVSLTLT 243 (364)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcC-CCCchh-HHHhcCCCCCEE---Eeccccc-CCceeEEEEe
Confidence 44555555 568899999999999999999999999987 555422 222333333344 5689964 5899999988
Q ss_pred eCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE
Q 014769 267 NDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM 346 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~ 346 (419)
+. ++. . .....+++.++++..++.+.|+...++.+.++. ++. + +.+.. +.+. ....-|+
T Consensus 244 ~~--------~~~-~--~~~~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~---~~~---l-~~l~~-~~v~--~vRG~Gl 302 (364)
T PRK04013 244 NF--------DVE-R--GKHGSTFGGNPLACKAVAVTLRILRRERLVEKA---GEK---F-IEIKG-ERVV--TTRGRGL 302 (364)
T ss_pred cc--------ccc-C--CCcCCCCCcCHHHHHHHHHHHHHHHhccHHHHH---HHH---H-HHhcc-Ccce--eeeeCcE
Confidence 65 221 1 112335678888888888888764333222222 111 2 12222 2222 1234477
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.-+.+.. +...+...+ .++|+++.+.. .+.+|+.+ ..+++++++++++|++++.+..
T Consensus 303 ~~gve~~~-------~~~~i~~~~-~~~Gll~~~~g----~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 303 MIGIVLKK-------PVGKYVEEL-QNRGYLVHTAG----QRVIRLLPPLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred EEEEEeCC-------cHHHHHHHH-HhCCcEEeeCC----CCEEEEeCCcccCHHHHHHHHHHHHHHHHHHh
Confidence 77777742 234555555 56899987642 37899998 4689999999999999998764
No 297
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.82 E-value=5.9e-17 Score=155.07 Aligned_cols=352 Identities=16% Similarity=0.116 Sum_probs=208.0
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|.-... .-.-+|.+.+++.+++.+... ........+.+..+++.+.+..+ ...+.++++++++
T Consensus 42 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~l~~~~p--~~~~~v~f~~sGs 116 (442)
T PRK13360 42 THDGRRVLDGTAGLWCVN-AGHGRPEIVEAVRAQAGELDY--APAFQMGHPKAFELANRIAEIAP--GGLNHVFFTNSGS 116 (442)
T ss_pred eCCCCEEEECchhHHHhc-cCCCCHHHHHHHHHHHHhCCC--cccCCcCCHHHHHHHHHHHHhCC--CCCCEEEEeCCcH
Confidence 446899999988843221 123679999999999875321 11111112344455555544222 1236899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-C------------CEEEEEeccCC--C-Cccc-----
Q 014769 118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-Q------------VEVRHFDLLPE--R-NWEV----- 168 (419)
Q Consensus 118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g------------~~~~~~~~~~~--~-~~~~----- 168 (419)
+|++.+++.... ++ .+|+....+|++....+... | ..+..++.... . .+..
T Consensus 117 eA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 196 (442)
T PRK13360 117 ESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEH 196 (442)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHH
Confidence 999999887542 22 57999999999864322211 1 01122221100 0 0111
Q ss_pred ---ChHHHHHhhc---CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 169 ---DLDAVEALAD---KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 169 ---~~~~l~~~~~---~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
..+.+++.+. .+..+.+++.| ....|.. .+.+++++|.++|+++|+++|+||++.++...|..+ ....++.
T Consensus 197 ~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv 275 (442)
T PRK13360 197 GAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAPF-AAQYFGV 275 (442)
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-hhhhcCC
Confidence 1346666664 23345566777 4455664 689999999999999999999999998775545432 1122222
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
.+.++ +++|.++...+++|.+++++ ++.+.+... ...+++.++++..++.+.|+...++
T Consensus 276 ~PDiv---t~gK~l~gG~~P~gav~~~~--------~i~~~~~~~~~~~~~~~~~~T~~g~pl~~aaa~a~L~~l~~~-- 342 (442)
T PRK13360 276 TPDLL---TCAKGLTNGAIPMGAVFVSS--------EIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALATLDLYERE-- 342 (442)
T ss_pred CCcee---eeeeccccCccceEEEEEcH--------HHHHHhhcCCccccccccCCCCCCCHHHHHHHHHHHHHHHhC--
Confidence 22233 78999644337899988865 566655421 2235567888877777777653222
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCISCPNK-PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLR 391 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R 391 (419)
...++++++.+++.+.|+++.....+.. ..-|++.-+.+............++...+ .++||++.++ .+.+|
T Consensus 343 -~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~~~~l~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~-----~~~lr 415 (442)
T PRK13360 343 -GLLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGAVELAPRDGKPGKRAYEVFLKC-FEKGLMIRYT-----GDILA 415 (442)
T ss_pred -CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEEecCCCCcchhHHHHHHHH-HHCCcEEEec-----CCEEE
Confidence 2344555566666666654322211111 22344444444321100011234566555 5679999764 25799
Q ss_pred EEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 392 IAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 392 is~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+++ ..++++|++++++|.+++++.
T Consensus 416 ~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 416 LSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 997 478999999999999998764
No 298
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.82 E-value=2e-17 Score=157.38 Aligned_cols=347 Identities=13% Similarity=0.078 Sum_probs=212.1
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|.-... .-.-+|.+.+++.+++.......... -..+.+..+++.+.+..+ .+.+.++++++
T Consensus 37 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~la~~L~~~~p--~~~~~v~f~~S 111 (428)
T PRK07986 37 LILADGRRLVDGMSSWWAAI-HGYNHPQLNAAMKSQIDAMSHVMFGG--ITHPPAIELCRKLVAMTP--QPLECVFLADS 111 (428)
T ss_pred EEeCCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHhhcCCccccc--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCC
Confidence 44456999999988843221 12357899999999987643211110 123445556666654332 23468999999
Q ss_pred HHHHHHHHHHHhcC------C-CCeEEeeCCCCCCcHHHHhhc-CCE-------------EEEEeccCCC---Cc-ccCh
Q 014769 116 CKQAVEVILSVLAR------P-GANVLLPRPGWPYYEGIAQRK-QVE-------------VRHFDLLPER---NW-EVDL 170 (419)
Q Consensus 116 ~~~al~~~~~~l~~------~-gd~vlv~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~---~~-~~~~ 170 (419)
+++|++.+++.... . ..+|+....+|++....+... +.. +..++..... .+ .-|+
T Consensus 112 GsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~ 191 (428)
T PRK07986 112 GSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDI 191 (428)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHH
Confidence 99999999887642 2 368999999998754333222 100 1111111000 00 1145
Q ss_pred HHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 171 DAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 171 ~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
+.+++.+.. +..+.+++.| +.-.|. ..+.+++++|.++|+++|+++|+||++.++...|..+ ....++..+.++
T Consensus 192 ~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~DEv~tG~GrtG~~f-a~~~~gv~PDi~ 270 (428)
T PRK07986 192 APFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADEIATGFGRTGKLF-ACEHAGIAPDIL 270 (428)
T ss_pred HHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCCee-eecccCCCCCEE
Confidence 566666642 2344566666 444565 4578999999999999999999999998765555432 122233222333
Q ss_pred EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769 246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318 (419)
Q Consensus 246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 318 (419)
+++|.+ ..| +++|.+++++ ++++.+... ...+++.++++..++.+.|+...++ +..++
T Consensus 271 ---t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~L~~i~~~---~~~~~ 335 (428)
T PRK07986 271 ---CLGKAL-TGGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESG---DWQQQ 335 (428)
T ss_pred ---Eechhh-hCCcccCcchhchH--------HHHHHhhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHH
Confidence 589996 467 5888888865 577777542 2234567788888877777653222 23445
Q ss_pred HHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--e
Q 014769 319 LRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--C 395 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~ 395 (419)
++++.+++.+.|+++.....+. ...-|++.-+.+... .....+...+ .++||++.+. .+.+|+.+ .
T Consensus 336 ~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~~~~-----~~~~~~~~~l-~~~Gl~~~~~-----g~~i~~~Ppl~ 404 (428)
T PRK07986 336 VAAIEAQLREELAPLRDAPMVADVRVLGAIGVVETTRP-----VNMAALQRFF-VEQGVWIRPF-----GKLIYLMPPYI 404 (428)
T ss_pred HHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEeCCc-----ccHHHHHHHH-HHCCcEEEec-----CCEEEEeCCCC
Confidence 5555566666665431111111 123366666666431 1234555555 6789999874 25899987 5
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~ 414 (419)
.+++++++++++|.+++.+
T Consensus 405 it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 405 ILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CCHHHHHHHHHHHHHHHhh
Confidence 7999999999999999865
No 299
>PLN02271 serine hydroxymethyltransferase
Probab=99.82 E-value=9.5e-17 Score=151.88 Aligned_cols=335 Identities=11% Similarity=0.028 Sum_probs=217.9
Q ss_pred ChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHHHHHHHhhCCCCCC-C-CcEEEcccHHHHHHHHHHHhcCCC
Q 014769 60 TAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAIADYLSRDLPYKLS-A-DDVYVTLGCKQAVEVILSVLARPG 131 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~-~~i~~t~g~~~al~~~~~~l~~~g 131 (419)
.++.+.+++...+.+.... .|+....+.+++....+...+.++.... . .+|-.- +++.|+..++.++++||
T Consensus 160 ~S~av~~algS~ltnkYaEG~pG~Ryy~G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~-SGs~AN~aV~~ALl~PG 238 (586)
T PLN02271 160 VCRAVMEALGSHLTNKYSEGMPGARYYTGNQYIDQIERLCCERALAAFGLDSEKWGVNVQPY-SCTSANFAVYTGLLLPG 238 (586)
T ss_pred CCHHHHHHhcCcccccCCCCCCCCcCCCCChhHHHHHHHHHHHHHHHhCCcccccccceeec-cHHHHHHHHHHHhcCCC
Confidence 5677877776665543222 3444445557776666776666653321 1 344443 77889999999999999
Q ss_pred CeEEeeCCCCCCcHHH---------HhhcCCEEE--EEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCCccccCCCH
Q 014769 132 ANVLLPRPGWPYYEGI---------AQRKQVEVR--HFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 132 d~vlv~~p~~~~~~~~---------~~~~g~~~~--~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
|+|+..+..|.++... +...|..+. .|+++++ +..+|.+++++ +...++++|++..-.+| ..+|
T Consensus 239 D~IL~ldl~~GGHlshg~~~~~g~~vs~sG~~~~~vpY~~d~~-~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D- 314 (586)
T PLN02271 239 DRIMGLDSPSGGHMSHGYYTPGGKKVSGASIFFESLPYKVNPQ-TGYIDYDKLEEKALDFRPKILICGGSSYP--REWD- 314 (586)
T ss_pred CEEEEecCCCCCchhcccccccccccccccceEEEEEcccccc-cCccCHHHHHHHhhhcCCeEEEECchhcc--CcCC-
Confidence 9999988877765322 133454433 4445433 45799999998 55667888777666777 5567
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC--------
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG-------- 271 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~-------- 271 (419)
++++.++|+++|+++++|.+|......+...++.... . .++++|++|+ +.|.|.|.+++++...
T Consensus 315 --~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~~sP~~~-a---Dvvt~TTHKt--LrGPrGG~I~~r~~~~~~~~g~~g 386 (586)
T PLN02271 315 --YARFRQIADKCGAVLMCDMAHISGLVAAKECVNPFDY-C---DIVTSTTHKS--LRGPRGGIIFYRKGPKLRKQGMLL 386 (586)
T ss_pred --HHHHHHHHHHcCCEEEEECcccccccccCcCCCCCcC-C---cEEEeCCccc--CCCCCceEEEecccccccccCCcc
Confidence 8888999999999999999998765544322211111 2 3888999998 5777789998864210
Q ss_pred ----ccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769 272 ----IFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 272 ----~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
....+++.+++.... .+-+++......+++.++.+.....+.+..+++.++.+.|.+.|.+. |+.++......
T Consensus 387 s~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdn 465 (586)
T PLN02271 387 SHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDN 465 (586)
T ss_pred ccccccccHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCc
Confidence 000124555665543 22233333334555555654333445788889999999999999887 88755444556
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCCeEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKNWLRIAF------CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~~Ris~------~~~~~~l~~~l~~l~~~~~ 413 (419)
..+++++.... -....+++.|++.||.+.--.-++ .++.+||+. +..++++++..+.|.++++
T Consensus 466 HlvLvDl~~~g-----~~G~~ae~~Le~~~I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 466 HLLLWDLTTLG-----LTGKNYEKVCEMCHITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred ceeeecCcccC-----CCHHHHHHHHHHcCeEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 77788775432 123556777899999885433222 257899998 2357888888888888776
No 300
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.82 E-value=5.2e-17 Score=156.06 Aligned_cols=350 Identities=11% Similarity=0.047 Sum_probs=208.0
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||..+..... -.-+|.+.+++.+++..... ....-..+.+..+++.+.+..+ ...+.+++++++++
T Consensus 69 ~dG~~ylD~~g~~~~~l--Gh~~p~v~~Ai~~ql~~~~~---~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGse 141 (459)
T PRK06082 69 VDGKKYMDFHGNNVHQL--GYGHPHVIEKVKEQMAKLPF---SPRRFTNETAIECAEKLTEIAG--GELNRVLFAPGGTS 141 (459)
T ss_pred CCCCEEEEcccHhhccc--CCCCHHHHHHHHHHHHhCCC---ccCccCCHHHHHHHHHHHHhCC--CCCCEEEECCCcHH
Confidence 35788999873322211 12689999999999875322 1111123445555555554332 22368999999999
Q ss_pred HHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhc-CCE------------EEEEeccCCCC--cc-c------ChHHHH
Q 014769 119 AVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRK-QVE------------VRHFDLLPERN--WE-V------DLDAVE 174 (419)
Q Consensus 119 al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~--~~-~------~~~~l~ 174 (419)
|++.+++.... . ..+|+....+|++....+... +.. +..++...... +. . .++.++
T Consensus 142 Ave~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 221 (459)
T PRK06082 142 AIGMALKLARHITGNFKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADGSDVHYADYLE 221 (459)
T ss_pred HHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHHhhcCCcccccCCCCCCCCCEEeCCCcccccccCChhHHHHHHHHHHH
Confidence 99999987642 2 378888899998764333222 211 11111100000 00 0 124466
Q ss_pred HhhcC-CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 175 ALADK-NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 175 ~~~~~-~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
+.+.. +..+.+|..| .+..+...|.++++++.++|++||+++|+||++.++...|..+ ....++..+.++ +++|
T Consensus 222 ~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~f-a~e~~gv~PDiv---~~gK 297 (459)
T PRK06082 222 YVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDEIPNGMGRTGEWF-THQAYGIEPDIL---CIGK 297 (459)
T ss_pred HHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhh-HhHhhCCCCCEE---Eecc
Confidence 66642 2345566666 4444557899999999999999999999999999875555432 112233333334 4789
Q ss_pred cCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 253 RWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 253 ~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
.++ .| +++|.+++++ ++...+... ...+++.++++..++.+.|+....+ ...++++++.+++.+.|
T Consensus 298 gl~-gG~~P~~av~~~~--------~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L 365 (459)
T PRK06082 298 GLG-GGLVPIAAMITKD--------KYNTAAQISLGHYTHEKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERL 365 (459)
T ss_pred ccc-CCCCcceEEEEcH--------HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHH
Confidence 965 46 5999998865 343332211 1235667888877777777653221 23445555555555555
Q ss_pred hc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHH
Q 014769 331 KE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSAL 401 (419)
Q Consensus 331 ~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l 401 (419)
++ +|.+.. ...-|.++.+.+.........+ ...+...+ .++||++.+.. .+.+|+++ ..++++|
T Consensus 366 ~~l~~~~~~i~~--vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~----~~~i~~~Ppl~it~~ei 438 (459)
T PRK06082 366 LEMKAKYPLIGD--VRGIGLLWGVELVTDRHTKERAYDEAEAVLYRC-LNNGLSFKVSQ----GNVIQLSPPLIITREEL 438 (459)
T ss_pred HHHHhhCCCeee--eeeccceeEEEEccCccccCccHHHHHHHHHHH-HhCCCEEEecC----CCEEEEeCCCccCHHHH
Confidence 44 332221 2234666666664211000001 23444455 56899987732 47899997 4699999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 014769 402 KDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 402 ~~~l~~l~~~~~~~~~~ 418 (419)
+++++++++++.+..++
T Consensus 439 d~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 439 TQALAILEEAIAKICQD 455 (459)
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 99999999999887554
No 301
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.82 E-value=3.4e-19 Score=156.02 Aligned_cols=288 Identities=18% Similarity=0.223 Sum_probs=183.4
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC------CCeEEeeCCCCCCcHHHHhhcCCEEEEEe
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP------GANVLLPRPGWPYYEGIAQRKQVEVRHFD 159 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~ 159 (419)
.++|.+.|.+++....+...+...|++.+|+|+.+++++.+|... .-.|+...|.|+.|.............+.
T Consensus 45 s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~qt~~f~s~~y~w~ 124 (363)
T PF04864_consen 45 SPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQTDFFDSRLYKWA 124 (363)
T ss_dssp -HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHHCCCT-BTTEEEE
T ss_pred cHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHHHHhccccCcccc
Confidence 478999999988776666667778999999999999999999532 25789999999999877766554433333
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
-+. ..|. ..-...+-.=++++||||.|.+ .+.++ +..+..+|.|-+|..-.|+ ++....
T Consensus 125 Gda-~~~~-------~~~~~~~~IElVTSPNNPDG~l-----r~~V~---~g~~~k~I~D~AYYWPhyT-----pI~~~a 183 (363)
T PF04864_consen 125 GDA-SNFK-------NSDNPSPYIELVTSPNNPDGQL-----REAVL---NGSSGKVIHDLAYYWPHYT-----PITAPA 183 (363)
T ss_dssp EEC-CCGT-------T-S-CCGEEEEEESS-TTT-----------SS---TTTEEEEEEE-TT-STTTS--------S-B
T ss_pred ccH-Hhhc-------cCCCCCCeEEEEeCCCCCcccc-----cchhc---CCCCcceeeeeeeeccccc-----ccCCCC
Confidence 221 1121 1111123344899999999986 33344 3445668999999974443 332221
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccc----h-----
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTK----E----- 309 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~----~----- 309 (419)
+..|.+.|+||.-|-+|.|+||.+++++ ++.+++..+... +.+++--+|.-+.++|+... .
T Consensus 184 --D~DiMLFT~SK~TGHAGSR~GWAlVKD~-------~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~ 254 (363)
T PF04864_consen 184 --DHDIMLFTLSKLTGHAGSRFGWALVKDE-------EVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTE 254 (363)
T ss_dssp ----SEEEEEHHHHCS-GGG-EEEEEES-H-------HHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTT
T ss_pred --CCceEEEEEecccCccccccceeeecCH-------HHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCcc
Confidence 2237788999998999999999999763 688888877543 56778888877777666421 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC-----CCCC---C-----CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEI-----PCIS---C-----PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV 376 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~-----~~~~---~-----~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv 376 (419)
+.+.--.+.+++|.+.|.+.+..- +.+. | +..| ..-|.|++++.. ++ .-+...|++.||
T Consensus 255 ~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~p-sPafAWlkCe~e------ed-~DC~~~l~~~~I 326 (363)
T PF04864_consen 255 DIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREP-SPAFAWLKCERE------ED-EDCYAVLREAKI 326 (363)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE----SEEEEEESSC------GG-SSHHHHHHCTTE
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCC-CCCeEEEecCCc------cc-ccHHHHHHhCCc
Confidence 355666788899999999988752 2111 0 1122 345899999742 11 224566688999
Q ss_pred EeecCCCCCC-CCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 377 IVTPGIYVGL-KNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 377 ~v~~g~~~~~-~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
....|..|+. ..++|||+-.++++++.++++|...
T Consensus 327 ~tr~G~~fga~~ryVRlSml~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 327 ITRSGVLFGADSRYVRLSMLKRDDDFDQLLERLSKL 362 (363)
T ss_dssp EEEEGGGGTS-TTEEEEESSS-HHHHHHHHHHHHCC
T ss_pred ccCCCCccCCCCCeEEEeccCCHHHHHHHHHHHHhh
Confidence 9999999997 6899999999999999999999753
No 302
>PRK06105 aminotransferase; Provisional
Probab=99.82 E-value=3.3e-17 Score=157.68 Aligned_cols=355 Identities=14% Similarity=0.083 Sum_probs=211.8
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+...+|+.+|||..|..+.. .-.-+|.+.+++.+++++..+ ..+. ....+.+..+++.+.+..+ .+.+.+++++
T Consensus 42 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~ 116 (460)
T PRK06105 42 VYDDAGKRYIEGMAGLWSVA-LGFSEQRLVEAAARQMKKLPFYHTFS--HKSHGPVIDLAEKLVAMAP--VPMSKVFFTN 116 (460)
T ss_pred EEECCCCEEEEcchhHHhcc-CCCCCHHHHHHHHHHHHhCCCeeccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEeC
Confidence 33456899999988843322 123579999999999876431 1111 1123444555555554332 2346899999
Q ss_pred cHHHHHHHHHHHhc------C-CC-CeEEeeCCCCCCcHHHHhhcCC-E------------EEEEeccCCCCc-------
Q 014769 115 GCKQAVEVILSVLA------R-PG-ANVLLPRPGWPYYEGIAQRKQV-E------------VRHFDLLPERNW------- 166 (419)
Q Consensus 115 g~~~al~~~~~~l~------~-~g-d~vlv~~p~~~~~~~~~~~~g~-~------------~~~~~~~~~~~~------- 166 (419)
++++|++.+++... . ++ .+|+....+|++....+..... . +..++......+
T Consensus 117 SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 196 (460)
T PRK06105 117 SGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRSFDLPLDRILHTGCPHYYRFGLPGESE 196 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccccCCCCCCCEEcCCCcccccccCCCCh
Confidence 99999999999853 1 22 5788889999876433221111 0 111111100000
Q ss_pred ----ccChHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 167 ----EVDLDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 167 ----~~~~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
....+++++.+. .+..+.+|+.| +...|. ..|.++++++.++|++||+++|+||++.++...|..+ ....
T Consensus 197 ~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f-~~~~ 275 (460)
T PRK06105 197 EAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVICGFGRTGNMF-GCET 275 (460)
T ss_pred HHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCeEEEeccccCCCcCchhh-hHHh
Confidence 001345566553 23456667777 555566 4699999999999999999999999998875555432 2223
Q ss_pred cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccch
Q 014769 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
++..+.++ +++|.++...+++|.+++++ ++.+.+... ...+++.++++..++.+.|+...+
T Consensus 276 ~~v~PDi~---~~gK~lggG~~P~~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~ 344 (460)
T PRK06105 276 FGIKPDIL---VMSKQLSSSYQPLSAVLMNE--------KVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAIIEE 344 (460)
T ss_pred cCCCCCee---eeecccccCcccceEEEEcH--------HHHHHHhcccccCcccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 33333333 67899654336899999875 566666531 123566788888887777765332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEeecCC
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g~ 382 (419)
+ +..+++++..+++.+.|+++....++ ....-|++.-+.+..... ..... ...+...+ .++||++.+.
T Consensus 345 ~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~a~~i~~~~-~~~Gvl~~~~- 419 (460)
T PRK06105 345 R---DLVGNAAERGARLQARLRALADHPLVGEVRGVGLIAAVELVADKATKTPFEPPGKVGARANAAA-HEHGVISRAM- 419 (460)
T ss_pred c---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEEEEEEecCcccCCCCCchhHHHHHHHHHH-HHCCeEEEec-
Confidence 2 23344555555555555443111111 122346666666632110 00001 13444444 5689999774
Q ss_pred CCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 383 YVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 383 ~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.+.+|+++. .++++++++++++.++++++.
T Consensus 420 ----g~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 451 (460)
T PRK06105 420 ----GDTLAFCPPLIITAAQVDEMVDRFGRALDDVA 451 (460)
T ss_pred ----CCEEEEECCCccCHHHHHHHHHHHHHHHHHHH
Confidence 258999974 599999999999999998764
No 303
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.82 E-value=7.3e-17 Score=149.97 Aligned_cols=321 Identities=16% Similarity=0.156 Sum_probs=209.6
Q ss_pred HHHHHH-HHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC
Q 014769 62 VEAEDA-IVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140 (419)
Q Consensus 62 ~~v~~a-~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~ 140 (419)
.++.++ +...+. ++- .|..+..+.+|++++++++ +-+.++.|++++.|++.++...++|||.| +.++
T Consensus 50 ~aMs~~q~a~~~~-GDe-~yag~~s~~~lE~~va~~~--------G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~ 117 (450)
T TIGR02618 50 NAMSDKQWAGLMM-GDE-AYAGSRNFYHLERTVRELY--------GFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNM 117 (450)
T ss_pred HHHHHHHHHHhhh-cch-hhcCCCcHHHHHHHHHHHH--------CCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCce
Confidence 555555 444443 222 5888888899999999998 34689999999999998887788999977 6677
Q ss_pred CCCcHH-HHhhcCCEEEEEecc--------CCCCcccChHHHHHhhcCC----ccEEEEeCCCC-ccccCCCHHHHHHHH
Q 014769 141 WPYYEG-IAQRKQVEVRHFDLL--------PERNWEVDLDAVEALADKN----TAAMVIINPGN-PCGNVFTYHHLQEIA 206 (419)
Q Consensus 141 ~~~~~~-~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~n-ptG~~~~~~~l~~i~ 206 (419)
|..... .....|..+.-++.+ ....+.+|++.+++++++. .+.+.+.+++| ..|+++|.++++++.
T Consensus 118 ~f~Tt~ahIe~~Gav~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~ 197 (450)
T TIGR02618 118 YFTTTRYHQEKNGATFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVR 197 (450)
T ss_pred eHHHHHHHHHhCCeEEEeeecccccccccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHH
Confidence 754333 357777754444322 1234678999999999752 34677778877 558999999999999
Q ss_pred HHHHhCCCeEEEccccccc--c--------cCCCCCC----CccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCC
Q 014769 207 EMARKLRVMVVADEVYGHL--T--------FGSIPYT----PMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNG 271 (419)
Q Consensus 207 ~~~~~~~~~li~De~~~~~--~--------~~~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~ 271 (419)
++|+++|+.+|.|.+.... . +.+.+.. .+..+.+ .++.|..|.++.+ | |+++++++
T Consensus 198 elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD----~~~~S~~Kd~~~~~G---G~l~~~d~-- 268 (450)
T TIGR02618 198 ELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD----GCTMSGKKDCLVNIG---GFLCMNDD-- 268 (450)
T ss_pred HHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc----EEEEeeccCCCCCCc---eEEEeCCH--
Confidence 9999999999999998761 1 1111110 0111221 4666888886665 4 66665542
Q ss_pred ccchhhHHHHHHhhhcc------ccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 272 IFQKSGIIDSIKDCLSI------YSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~~------~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+++++.+...-. .+..+.-...+++..|++.. ..+.+ +-..+.++|.+.|.+. |+.+ ..|.+
T Consensus 269 -----~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~gL~e~~~~~y~~----~r~~~a~~La~~L~~~-Gvpv-~~p~g 337 (450)
T TIGR02618 269 -----EMFQSAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIE----HRVKQVRYLGDKLKAA-GVPI-VEPVG 337 (450)
T ss_pred -----HHHHHHHHHhhhcCCccccCchhhhhHHHHHHHHHHhhhHHHHH----HHHHHHHHHHHHHHHC-CCcc-cCCCC
Confidence 577777665311 11223223344444454422 22222 2333566777788777 8874 47888
Q ss_pred eEEEEeecCccc---ccCCCCHHHHHHHHHHhcCeEee-cCCCC-CC-----------CCeEEEEee---cCHHHHHHHH
Q 014769 345 SMVTMVKLNPWL---LEDINDDIEFALKLAKEESVIVT-PGIYV-GL-----------KNWLRIAFC---AEPSALKDGL 405 (419)
Q Consensus 345 g~~~~~~~~~~~---~~~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~-----------~~~~Ris~~---~~~~~l~~~l 405 (419)
|..++++..... .+..-....++.+|..+.||.-. -|+.. +. -..+|+++- .+.+.++...
T Consensus 338 gh~V~vda~~~lph~~~~~~p~~al~~~ly~~~gir~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~ 417 (450)
T TIGR02618 338 GHAVFLDARRFLPHIPQDQFPAQSLAASIYVETGVRSMERGIVSAGRNNVTGEHHRPKLELVRLTIPRRVYTYAHMDVVA 417 (450)
T ss_pred cceEEEEhHHhCCCCChhhChHHHHHHHHHHHhCccEEeecceecccCCCCCcccCCccceeeeccccccccHhHHHHHH
Confidence 888888653310 01112467888899899999643 33321 11 146999993 4889999999
Q ss_pred HHHHHHHHH
Q 014769 406 GRMKAFCQR 414 (419)
Q Consensus 406 ~~l~~~~~~ 414 (419)
+.|..+.++
T Consensus 418 ~~~~~~~~~ 426 (450)
T TIGR02618 418 DGIIKLYKH 426 (450)
T ss_pred HHHHHHHhh
Confidence 999887754
No 304
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.82 E-value=5.1e-17 Score=156.18 Aligned_cols=357 Identities=13% Similarity=0.033 Sum_probs=215.4
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCC---CCCCcEEE
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYK---LSADDVYV 112 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~---~~~~~i~~ 112 (419)
+...+|+.+|||..|.-... .-..+|.+.+++.+++..-.. .....-..+.+..+++.+.+..+.. -+.+.+++
T Consensus 58 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~Ai~~q~~~l~~--~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~~v~f 134 (472)
T PRK08742 58 LVGHDGRRYLDAVSSWWTNL-FGHAEPRIGAAIAAQAGELEQ--VMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFY 134 (472)
T ss_pred EEeCCCCEEEEcCccHHhcc-CCCCCHHHHHHHHHHHHhCCC--ccccccCCHHHHHHHHHHHHhCCCcccCCCCCEEEE
Confidence 44456899999988843321 123578999999998864221 1110111244556666655433211 12368999
Q ss_pred cccHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCC--Cccc-
Q 014769 113 TLGCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPER--NWEV- 168 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~- 168 (419)
++++++|++.+++.... ++ .+|+....+|++....+...+.. +..++..... .++.
T Consensus 135 ~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~ 214 (472)
T PRK08742 135 ADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAEPGQS 214 (472)
T ss_pred eCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCcccccccCCCCCCCEEeCCCCccccccCCC
Confidence 99999999999987642 22 68999999999865443332211 1111111000 0011
Q ss_pred -------ChHHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769 169 -------DLDAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (419)
Q Consensus 169 -------~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 236 (419)
+++.+++.+.. +..+.+|+.| ++-.|. ..|.++++++.++|+++|+++|.||++.++...|..+ ...
T Consensus 215 ~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~lc~~~gillI~DEV~TGfGRtG~~~-a~e 293 (472)
T PRK08742 215 AEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDAHGAFLIADEIATGFGRTGTLF-ACE 293 (472)
T ss_pred HHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccch-HHH
Confidence 24555666532 3455677777 455676 5789999999999999999999999999887666432 222
Q ss_pred ccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccc
Q 014769 237 LFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~ 308 (419)
.++..+.++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++..++.+.|+...
T Consensus 294 ~~gv~PDiv---~~gKgl-~gG~~Plaav~~~~--------ei~~~~~~~~~~~~~~h~~T~~gnpl~~Aaa~a~L~~i~ 361 (472)
T PRK08742 294 QAGVMPDLL---CLSKGL-TGGFLPLSAVLATQ--------QLYDAFLDDSRERAFLHSHSYTGNPLACAAALATLDIFA 361 (472)
T ss_pred hcCCCCCEE---EEcccc-cCCCCCcceeeccH--------HHHHHhhccCccCccCcCCCCCccHHHHHHHHHHHHHHH
Confidence 333333444 468995 557 4899999865 566655421 12356678888888888877644
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc--CCCCH----HHHHHHHHHhcCeEeecCC
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE--DINDD----IEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~--~~~~~----~~~~~~ll~~~gv~v~~g~ 382 (419)
++.+.++..++.++...+.+.++++|.+.. ...-|+++-+.+...... ..... ..+...+ .++||++.+.
T Consensus 362 ~~~l~~~~~~~g~~l~~~~~~~~~~~~i~d--vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~- 437 (472)
T PRK08742 362 DDDVIARNQPTAARMTQLAAQIGEHPHVAD--VRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAA-LARGVVLRPL- 437 (472)
T ss_pred HCCHHHHHHHHHHHHHHHHHHHhcCCCeee--EeccceEEEEEeccCccccccCCchhHHHHHHHHHH-HHCCeEEEec-
Confidence 333433333333333344444444543321 234466666666421100 00011 2344444 5689999774
Q ss_pred CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.+.+||.+ ..++++|++++++|++++.+..
T Consensus 438 ----g~vi~~~PpL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 438 ----GDVLYWMPPYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHh
Confidence 25899998 4689999999999999998753
No 305
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=2.8e-17 Score=156.60 Aligned_cols=348 Identities=12% Similarity=0.073 Sum_probs=211.0
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|.-... .-.-+|.+.+++.+++.+....... .-..+.+..+++.+.... +...+.++++++
T Consensus 38 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~--~~~~~~~~~lae~L~~~~--p~~~~~v~f~~s 112 (429)
T PRK06173 38 ITLKDGRRLIDGMSSWWAAL-HGYNHPRLNAAATNQLAKMSHIMFG--GFTHEPAVELAQKLLEIL--PPSLNKIFFADS 112 (429)
T ss_pred EEcCCCCEEEEccchHHhcc-CCCCCHHHHHHHHHHHHhcCCcccc--ccCCHHHHHHHHHHHhhC--CCCcCEEEEeCC
Confidence 33456999999988732211 1235799999999998763221110 011233344444444322 223468999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCc-----cc
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNW-----EV 168 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~-----~~ 168 (419)
+++|++.+++.... ++ .+|+....+|++....+... +. .+..++.+. ..+ .-
T Consensus 113 GseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~ 191 (429)
T PRK06173 113 GSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPS-IKFGEEWNDE 191 (429)
T ss_pred chHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhhccCCCchhhhhcccccCCCCeEeCCCC-cccchhHHHH
Confidence 99999999887642 23 57899999998853222211 10 011121110 000 01
Q ss_pred ChHHHHHhhcC--CccEEEEeCC--CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769 169 DLDAVEALADK--NTAAMVIINP--GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243 (419)
Q Consensus 169 ~~~~l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 243 (419)
+++.+++.+.. +..+.+|..| +.-.|.. .|.++++++.++|++||+++|+||++.++...|..+ ....++..+.
T Consensus 192 ~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PD 270 (429)
T PRK06173 192 AIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIATGFGRTGKLF-ALEHAGVVPD 270 (429)
T ss_pred HHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEEecchhcCCCcCCcch-HHHhcCCCCC
Confidence 35556666642 3455667777 5666764 799999999999999999999999998765455432 1122222222
Q ss_pred EEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-----h-hccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 244 VITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-----C-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
|+ +++|.+ ..| +.++.+++++ ++.+.+.. + ...++..++++..++.+.|+...++ ...
T Consensus 271 -iv--~~gK~l-~gG~~p~~a~~~~~--------~i~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~i~~~---~~~ 335 (429)
T PRK06173 271 -IM--CIGKAL-TGGYLTLSATITTE--------AIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLES---PWQ 335 (429)
T ss_pred -EE--Eeehhh-hCCccccceEEecH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHH
Confidence 33 489996 457 4788888765 56676642 1 1223456777777777777653221 234
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-
Q 014769 317 DTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF- 394 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~- 394 (419)
++++++.+++.+.|+++.++..+. ....|++.-+.+... .+...+...+ .++||.+.+.. +.+|+.+
T Consensus 336 ~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel~~~-----~~~~~i~~~l-~e~Gi~v~~~g-----~~l~~~Pp 404 (429)
T PRK06173 336 QNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEMKEP-----VNMATLQPRF-VEHGIWVRPFG-----KLVYIMPP 404 (429)
T ss_pred HHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEeCCc-----ccHHHHHHHH-HHCCeEEEecC-----CEEEEeCC
Confidence 556666666777666432222121 123466666666431 1234555555 66799997742 5899998
Q ss_pred -ecCHHHHHHHHHHHHHHHHHHh
Q 014769 395 -CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 395 -~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
..+++++++++++|++++.+..
T Consensus 405 l~it~~ei~~~~~~l~~~l~~~~ 427 (429)
T PRK06173 405 FIISPDELSQLTSGLLRVLKQEY 427 (429)
T ss_pred ccCCHHHHHHHHHHHHHHHHHHh
Confidence 4689999999999999998754
No 306
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.81 E-value=3e-17 Score=156.19 Aligned_cols=344 Identities=14% Similarity=0.089 Sum_probs=208.3
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|..... .-.-+|.+.+++.++++......+.. -..+....+++.+.+..+ ...+.++++++
T Consensus 34 l~D~dG~~ylD~~~g~~~~~-lGh~~p~i~~ai~~q~~~~~~~~~~~--~~~~~~~~lae~L~~~~p--~~~~~v~f~~S 108 (422)
T PRK05630 34 LTLEDGSTVIDAMSSWWSAA-HGHGHPRLKAAAHKQIDTMSHVMFGG--LTHEPAIKLTRKLLNLTD--NGLDHVFYSDS 108 (422)
T ss_pred EEECCCCEEEEcchhHHHhc-CCCCCHHHHHHHHHHHHhCCCcccCC--cCCHHHHHHHHHHHhhCC--CCcCEEEEeCC
Confidence 44456999999988843321 12357899999999987643221110 012334444555443222 22468999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CC-------------EEEEEeccCCCCccc-C---
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QV-------------EVRHFDLLPERNWEV-D--- 169 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~-------------~~~~~~~~~~~~~~~-~--- 169 (419)
+++|++.+++.... ++ .+|+....+|++....+... +. ....++......... +
T Consensus 109 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 188 (422)
T PRK05630 109 GSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISE 188 (422)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhccCCCcccccccccccCCCCeEcCCCcccCCChHHHHH
Confidence 99999999887542 23 57999999999854333222 10 111222111100000 1
Q ss_pred -hHHHHHhhcCCccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 170 -LDAVEALADKNTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 170 -~~~l~~~~~~~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
.+.+++.+.+ ..+.+|..| +.-.|. ..+.+.++++.++|++||+++|+||++.++...|..+ ....++..+.++
T Consensus 189 ~~~~~~~~~~~-~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~DEv~tG~GrtG~~~-a~~~~gv~PDi~ 266 (422)
T PRK05630 189 YLRSLELLIDE-TVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFGRTGELF-ATLAAGVTPDIM 266 (422)
T ss_pred HHHHHHHHHhh-ceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEecceeCCCcCchhh-HHHhcCCCCCee
Confidence 2334444443 445556666 566676 4678999999999999999999999998875555322 122223222333
Q ss_pred EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-------hccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
+++|.+ ..| +.+|++++++ ++.+.+... ...+++.++++..++.++|+...++. ..+
T Consensus 267 ---t~gK~l-~gG~~p~~av~~~~--------~i~~~~~~~~~~~~~~h~~T~~g~Pla~aaa~aaL~~l~~~~---~~~ 331 (422)
T PRK05630 267 ---CVGKAL-TGGFMSFAATLCTD--------KVAQLISTPNGGGALMHGPTFMANPLACAVAHASLEIIETGM---WRK 331 (422)
T ss_pred ---eeechh-hcCccccceeeccH--------HHHHHHhccCCCCccccCCCCcCCHHHHHHHHHHHHHHHhCc---HHH
Confidence 678984 346 5899999876 566666421 12356678888887777776533222 233
Q ss_pred HHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769 318 TLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF 394 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~ 394 (419)
+++++.+++.+.|+. .|.+.. ...-|++.-+.+... .+...+...+ .++||++.+. .+.+|+.+
T Consensus 332 ~~~~~g~~l~~~L~~l~~~~~v~~--vRg~Gl~~~ie~~~~-----~~~~~~~~~~-~~~Gl~~~~~-----g~~l~~~P 398 (422)
T PRK05630 332 QVKRIEAELIAGLSPLAHLPGVAD--VRVLGAIGVVEMEQP-----VDMEEATQAA-VDHGVWLRPF-----GRLVYVMP 398 (422)
T ss_pred HHHHHHHHHHHHHHHhhcCCCeee--eeccccEEEEEECCc-----ccHHHHHHHH-HHCCeEEEec-----CCEEEEEC
Confidence 455555555555543 232221 123366777777431 1234555555 6679999764 25889988
Q ss_pred --ecCHHHHHHHHHHHHHHHHH
Q 014769 395 --CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 395 --~~~~~~l~~~l~~l~~~~~~ 414 (419)
..+++++++++++|+++++.
T Consensus 399 pL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 399 PYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CccCCHHHHHHHHHHHHHHHhc
Confidence 46899999999999999865
No 307
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.81 E-value=5.4e-17 Score=155.50 Aligned_cols=353 Identities=16% Similarity=0.118 Sum_probs=210.0
Q ss_pred hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
...+|+.+|||..|.-+.. .-.-+|.+.+++.+++..... ++...-..+....+++.+.+..+ ...+.|++++++
T Consensus 44 ~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~ql~~l~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sG 118 (445)
T PRK09221 44 TDADGRKILDGTAGLWCCN-AGHGRPEIVEAVARQAATLDY--APAFQMGHPLAFELAERLAELAP--GGLDHVFFTNSG 118 (445)
T ss_pred EeCCCCEEEEccccHhhcc-CCCCCHHHHHHHHHHHHhccC--ccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCc
Confidence 3446899999988843321 123678999999999876321 11111112344445555544322 124689999999
Q ss_pred HHHHHHHHHHhcC-------C-CCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccC-C--CCccc----
Q 014769 117 KQAVEVILSVLAR-------P-GANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP-E--RNWEV---- 168 (419)
Q Consensus 117 ~~al~~~~~~l~~-------~-gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~-~--~~~~~---- 168 (419)
++|++.+++.... + ..+|+....+|++....+..... .+..++... . ..+..
T Consensus 119 seAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (445)
T PRK09221 119 SESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPE 198 (445)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhccCCCCCCCeEeCCCccccccccCCChHH
Confidence 9999999887542 1 25799999999876433221110 111222110 0 00000
Q ss_pred ----ChHHHHHhhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 169 ----DLDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 169 ----~~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
..+.+++.+.. +..+.+++.| ....|. ..+.++++++.++|+++|+++|+||++.++...|..+ ....++
T Consensus 199 ~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~-~~~~~g 277 (445)
T PRK09221 199 HGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVITGFGRLGAAF-AAERFG 277 (445)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCCcCchhh-HHHhcC
Confidence 13456665542 3345566666 555676 4688999999999999999999999998765545432 122222
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
..+.++ +++|.++...+++|.+++++ ++++.+... ...+++.++++..++.+.|+...++
T Consensus 278 v~PDi~---~~gK~l~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~~~pl~~aaa~a~L~~i~~~- 345 (445)
T PRK09221 278 VTPDII---TFAKGLTNGAIPMGAVIASD--------EIYDAFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREE- 345 (445)
T ss_pred CCCCEE---EeccccccCcccceeeEEcH--------HHHHhhccCcccccccccccCCCcCHHHHHHHHHHHHHHHhc-
Confidence 222233 67899643337899988865 566655421 1235566777777777777653222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769 312 FCKLIDTLRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL 390 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~ 390 (419)
...++++++.+++++.|+++.....+. ...-|.+..+.+............++...+ .++||.+.++ .+.+
T Consensus 346 --~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~v~~~~~~~~~~~~~~~~~~~~-~~~Gv~~~~~-----~~~l 417 (445)
T PRK09221 346 --DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKC-FEKGLLVRYT-----GDTI 417 (445)
T ss_pred --cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEEEEEecccccccchHHHHHHHH-HHCCeEEeec-----CCEE
Confidence 335566777777777776542221111 122355555555321100001124555555 5679998764 3579
Q ss_pred EEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 391 RIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 391 Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
|+++ ..++++|++++++|++++.++
T Consensus 418 r~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 418 ALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 9997 468999999999999999764
No 308
>PRK06062 hypothetical protein; Provisional
Probab=99.81 E-value=6.9e-17 Score=155.05 Aligned_cols=351 Identities=15% Similarity=0.124 Sum_probs=208.4
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-... .-.-+|.+.+++.+++..... +.. .-..+.+..+++.+.+..+ -+.+.|+++++
T Consensus 47 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~--~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~S 120 (451)
T PRK06062 47 VWDYEGRRYLDFSSQLVNTN-IGHQHPKVVAAIQEQAARLCT--VAP-AHANDARSEAARLIAERAP--GDLSKVFFTNG 120 (451)
T ss_pred EEECCCCEEEEcccCHHhhc-CCCCCHHHHHHHHHHHHhcCC--cCC-ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCC
Confidence 33456899999988843221 123578999999999876432 111 1123444555555544322 22468999999
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-E-----------EEEEeccCCC--Ccc--cC-------h
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-E-----------VRHFDLLPER--NWE--VD-------L 170 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-~-----------~~~~~~~~~~--~~~--~~-------~ 170 (419)
+++|.+.+++.... .| .+|+....+|++....+..... . +..++..... .+. -+ +
T Consensus 121 GsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 200 (451)
T PRK06062 121 GADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERAL 200 (451)
T ss_pred hHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCCCCEEeCCCCccccccCCCChHHHHHHHH
Confidence 99999999987643 23 6788899999987544432211 0 1111111000 010 01 4
Q ss_pred HHHHHhhcC---CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 171 DAVEALADK---NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 171 ~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
+.+++.+.. +..+.+|+.| ....|.+ .|.++++++.++|+++|+++|+||++.+|...|..+ ....++..+.++
T Consensus 201 ~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~-a~~~~gv~PDi~ 279 (451)
T PRK06062 201 AHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWF-AIEHFGVVPDLI 279 (451)
T ss_pred HHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHH-HHHhcCCCCCee
Confidence 566666642 3345666677 4445665 689999999999999999999999999875544321 112222222333
Q ss_pred EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
+++|.+ ..| +++|.+++++ ++++.+... ...+++.++++..++.+.|+....+.+. ++.++
T Consensus 280 ---t~gK~l-ggG~~Pigav~~~~--------~i~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~l~---~~~~~ 344 (451)
T PRK06062 280 ---TFAKGV-NSGYVPLGGVAISE--------AIAATFADRPYPGGLTYSGHPLACAAAVATINAMEEEGIV---ENAAR 344 (451)
T ss_pred ---eechhh-hcCCcCcEEEEEcH--------HHHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHHhcCHH---HHHHH
Confidence 678995 456 4899999875 567766532 2235667888888888887753322222 23333
Q ss_pred HH-HHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccc--cCCC-------CHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769 322 SA-EICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLL--EDIN-------DDIEFALKLAKEESVIVTPGIYVGLK 387 (419)
Q Consensus 322 ~~-~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~-------~~~~~~~~ll~~~gv~v~~g~~~~~~ 387 (419)
.. +++.+.|+ +.+.+.. ...-|+++-+.+..... .... ....+...+ .++||++.+. .
T Consensus 345 ~G~~~l~~~L~~l~~~~~~v~~--vrG~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gvl~~~~-----~ 416 (451)
T PRK06062 345 IGAEVLGPGLRELAERHPSVGE--VRGLGVFWALELVADRETREPLAPYGASSAAMAAVKAAC-KERGLLPFVN-----G 416 (451)
T ss_pred HHHHHHHHHHHHHHhcCCcEEe--EeccccEEEEEEcccccccCCCcccchhhHHHHHHHHHH-HHCCcEEeec-----C
Confidence 32 23333333 3332221 22335555565532100 0000 023455555 5679998652 3
Q ss_pred CeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 388 NWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 388 ~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.+|+++ ..++++|++++++++++++++.
T Consensus 417 ~~lrl~ppl~~t~~eid~~~~~l~~~l~~~~ 447 (451)
T PRK06062 417 NRIHVVPPCTVTEDEVREGLAILDAALAVAD 447 (451)
T ss_pred CEEEEECCccCCHHHHHHHHHHHHHHHHHhh
Confidence 5789988 5799999999999999998653
No 309
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.80 E-value=7.4e-17 Score=153.53 Aligned_cols=349 Identities=11% Similarity=0.013 Sum_probs=204.5
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-+.. .-..+|.+.+++.+++.......+. .+.+..+++.+.+..+ ...+.++++++
T Consensus 47 l~D~dG~~yiD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~L~~~~~--~~~~~v~f~~S 118 (433)
T PRK00615 47 FIDSLGKTFIDFCGSWGSLI-HGHSHPKICDAIQQGAERGTSYGLT-----SEQEILFAEELFSYLG--LEDHKIRFVSS 118 (433)
T ss_pred EEECCCCEEEEcccchhccc-cCCCCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCc
Confidence 33456899999988854321 1236899999999998765422222 2334444554443222 22368999999
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHH---HhhcCCEE-----EEEeccCCCCc-----ccChHHHHHhhcC-
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGI---AQRKQVEV-----RHFDLLPERNW-----EVDLDAVEALADK- 179 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~---~~~~g~~~-----~~~~~~~~~~~-----~~~~~~l~~~~~~- 179 (419)
+++|++.+++.... .| .+|+....+|+++... ....+... ......+.... --|.+.+++.+..
T Consensus 119 GsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~ 198 (433)
T PRK00615 119 GTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL 198 (433)
T ss_pred hHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc
Confidence 99999999987643 34 6788889999886421 11111000 00000000000 0156777777642
Q ss_pred -CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769 180 -NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256 (419)
Q Consensus 180 -~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 256 (419)
+..+.+|+.| ....|.. .+.+++++|.++|++||+++|+||++.++ ..|... ....++..+.++ +++|.+ .
T Consensus 199 ~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~tG~-R~G~~g-a~~~~gv~PDi~---~~gK~l-g 272 (433)
T PRK00615 199 GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGG-AAAIYHVKPDIT---VYGKIL-G 272 (433)
T ss_pred CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccccc-cccHhH-HHHhcCCCCCeE---EEcccc-c
Confidence 2345566666 4445664 56899999999999999999999999876 333211 112222222233 479995 4
Q ss_pred CCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh--
Q 014769 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV-- 330 (419)
Q Consensus 257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l-- 330 (419)
.|+++|++++++ ++++.+... ...+++.+++...++.+.|+...++ ...++++++.+++.+.|
T Consensus 273 gG~p~~av~~~~--------~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~---~~~~~~~~~g~~l~~~l~~ 341 (433)
T PRK00615 273 GGLPAAAVVAHK--------SIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQ---GFYTQLSTLEQNFLSPIEE 341 (433)
T ss_pred CCcceeeeeecH--------HHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHH
Confidence 578899999976 577776432 1224456777777777777653321 12334444444443333
Q ss_pred --hcCCCCCCCCCCCceEEEEeecCcccccCC-----CC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHH
Q 014769 331 --KEIPCISCPNKPEGSMVTMVKLNPWLLEDI-----ND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSA 400 (419)
Q Consensus 331 --~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~-----~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~ 400 (419)
.+. ++. +.....|.++.+.+........ .+ ...+...+ .++||++.|.... .+ =++...++++
T Consensus 342 ~~~~~-g~~-v~~~r~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~---~~-~ls~~ht~~d 414 (433)
T PRK00615 342 MIRSQ-GFP-VSLVRYGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSA-FSKGVYLSPSPFE---AS-FLSSAHSMEN 414 (433)
T ss_pred HHHHc-CCC-eEEEeeceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHH-HHCCeeecCcccc---cc-ceecCCCHHH
Confidence 332 332 1111245565666643211000 01 12455555 5679999875421 11 3566789999
Q ss_pred HHHHHHHHHHHHHHHh
Q 014769 401 LKDGLGRMKAFCQRHT 416 (419)
Q Consensus 401 l~~~l~~l~~~~~~~~ 416 (419)
|+++++.+.+++.+..
T Consensus 415 id~~~~a~~~~~~~~~ 430 (433)
T PRK00615 415 LDYAQNVLIDSLEKVF 430 (433)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999998764
No 310
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.80 E-value=1.2e-16 Score=153.65 Aligned_cols=351 Identities=11% Similarity=0.025 Sum_probs=212.8
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.++||..|.-... .-.-+|.+.+++.+++....... ...-..+.+..+++.+.+.. +...+.++++++
T Consensus 41 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~l~~~~--~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~s 115 (466)
T PRK07030 41 LEDFEGKRYLDAVSSWWVNV-FGHANPRINQRIKDQVDQLEHVI--LAGFSHEPVIELSERLVKIT--PPGLSRCFYADN 115 (466)
T ss_pred EEECCCCEEEEcchhHHhhc-CCCCCHHHHHHHHHHHHhcCCcc--ccccCCHHHHHHHHHHHHhC--CCCcCEEEEeCC
Confidence 44456999999988843321 12357899999999987632111 00111244455555554422 223468999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCC--Cccc----
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPER--NWEV---- 168 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~--~~~~---- 168 (419)
+++|++.+++.... ++ .+|+....+|++....+...+.. +..++..... .++.
T Consensus 116 GsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~ 195 (466)
T PRK07030 116 GSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEE 195 (466)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHHhccCCccccccCCccCCCCEEcCCCCccccccCCCHHH
Confidence 99999999987632 23 57899999998865433322111 1111111000 0000
Q ss_pred ----ChHHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 169 ----DLDAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 169 ----~~~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
+++.+++.+.. +..+.+|..| +...|. ..|.++++++.++|+++|+++|.||++.++...|..+ ....++
T Consensus 196 ~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~-a~~~~g 274 (466)
T PRK07030 196 HSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIAVGFGRTGTMF-ACEQAG 274 (466)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCccccch-HHHhcC
Confidence 24455666642 3445566776 454565 5788999999999999999999999999886555422 122333
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh--------hhccccCCchHHHHHHHHHHcccchH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD--------CLSIYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
..+.++ +++|.+ ..| +++|.+++++ ++.+.+.. ....+++.++++..++.+.|+...++
T Consensus 275 v~PDiv---~~gKgl-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~ 342 (466)
T PRK07030 275 IRPDFL---CLSKAL-TGGYLPLAAVLTTD--------TVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDIFEQD 342 (466)
T ss_pred CCCCEE---eeehhc-cCCcccceEEEecH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhc
Confidence 333344 468995 468 5999999875 56666642 12235667888888888887764322
Q ss_pred HHHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCccccc--CC-CC---HHHHHHHHHHhcCeEeecC
Q 014769 311 FFCKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLE--DI-ND---DIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~--~~-~~---~~~~~~~ll~~~gv~v~~g 381 (419)
. ..++.++..+++.+.|++ .|.+. ....-|+++.+.+...... .. .+ ...+...+ .++||++.+.
T Consensus 343 ~---l~~~~~~~G~~l~~~L~~l~~~~~v~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~ 416 (466)
T PRK07030 343 N---VIENNRALARRMAEATAHLADHPHVA--EVRQTGMILAIEMVQDKASKTPYPWQERRGLKVYQHA-LERGALLRPL 416 (466)
T ss_pred C---HHHHHHHHHHHHHHHHHHHhcCCCEE--EeEeceeEEEEEeccCccccccCcchhHHHHHHHHHH-HHCCeEEEec
Confidence 2 234444555555555544 33222 1234466666666321100 00 01 12444445 5689999763
Q ss_pred CCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 382 IYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 382 ~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+.+|+.+ ..++++|+++++++.+++++.
T Consensus 417 -----g~~i~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (466)
T PRK07030 417 -----GSVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (466)
T ss_pred -----CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 25788886 579999999999999999876
No 311
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=5e-18 Score=142.18 Aligned_cols=166 Identities=17% Similarity=0.104 Sum_probs=130.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH-HHHhhcCCEEEEEeccCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE-GIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~~~~~~~~~ 165 (419)
.++++.+++++ +.+.+++++++|+++++..+++++..++++|+++.++|++.. ..+...|.++..++.+....
T Consensus 3 ~~~~~~l~~~~------~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~ 76 (170)
T cd01494 3 EELEEKLARLL------QPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGY 76 (170)
T ss_pred HHHHHHHHHHc------CCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehhhHHHhcCCEEEEeccCCCCc
Confidence 57889999988 356789999999999999999999988999999999999888 78888899999888755433
Q ss_pred cccChHHHHHhh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 166 WEVDLDAVEALA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 166 ~~~~~~~l~~~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
...+.+.+++.. .++++.+++++|+||+|...+ .++|.++|+++|+++|+|++|..+...... .. ....+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~---~~~l~~~~~~~~~~li~D~a~~~~~~~~~~-~~---~~~~~~d 149 (170)
T cd01494 77 GGLDVAILEELKAKPNVALIVITPNTTSGGVLVP---LKEIRKIAKEYGILLLVDAASAGGASPAPG-VL---IPEGGAD 149 (170)
T ss_pred cchhhhhhhhccccCceEEEEEecCcCCCCeEcC---HHHHHHHHHHcCCEEEEecccccccccccc-cc---cccccCC
Confidence 333333454433 456788899999999999998 588999999999999999999987654322 01 1112244
Q ss_pred EEEecCCCcCCCCCceeEEEEee
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
+++.|++|.++. .++|+++++
T Consensus 150 ~~~~s~~K~~~~--~~~G~l~~~ 170 (170)
T cd01494 150 VVTFSLHKNLGG--EGGGVVIVK 170 (170)
T ss_pred EEEEEcccccCC--CceEEEEeC
Confidence 888899999655 679999863
No 312
>PRK06148 hypothetical protein; Provisional
Probab=99.79 E-value=1.7e-16 Score=165.61 Aligned_cols=348 Identities=14% Similarity=0.047 Sum_probs=210.4
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+|+.++||..|.... -..+|.+.+++.+++..... ..|. .+.+..+++.+....+ ...+.++++++|+
T Consensus 621 ~dG~~ylD~~~g~~~l---GH~hp~v~~Ai~~q~~~l~~~~~~~-----~~~~~~lAe~L~~~~p--~~~~~v~f~nSGs 690 (1013)
T PRK06148 621 NRGRAYLDCFNNVCHV---GHAHPRVVAAAARQAARLNTNTRYL-----HDAIVAYAERLTATLP--DGLTVAFFVNSGS 690 (1013)
T ss_pred CCCCEEEEcccChhhc---CCCCHHHHHHHHHHHhhcCCcCCcC-----CHHHHHHHHHHHHhCC--CCcCEEEEeCCcH
Confidence 3588899998875221 23689999999999876422 1232 2344445555544222 2236899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccC--CCCccc-C-------hHH
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP--ERNWEV-D-------LDA 172 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~~~~~~-~-------~~~ 172 (419)
+|++.+++.... .| .+|+....+|++....+..... .+..++... ...+.. + .+.
T Consensus 691 EA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 770 (1013)
T PRK06148 691 EANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAES 770 (1013)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHH
Confidence 999999988653 23 6789999999876433222110 011111100 000110 1 123
Q ss_pred HHHhhc-----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 173 VEALAD-----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 173 l~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
++..+. .+..+.+|+.| ..-.|. ..|+++++++.++|+++|+++|.||++.++...|........++..+.++
T Consensus 771 l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv~PDiv 850 (1013)
T PRK06148 771 VAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGVVPDIV 850 (1013)
T ss_pred HHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCCCccee
Confidence 444332 13355667777 333444 67999999999999999999999999998865554322333333333333
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
+++|.+ ..|+++|.+++++ ++++.+... ...+++.++++..++.+.|+...++. ..++.++..
T Consensus 851 ---t~gK~l-ggG~Plgav~~~~--------ei~~~~~~g~~~~~Tf~gnpla~aaa~a~L~~i~~e~---l~~~~~~~G 915 (1013)
T PRK06148 851 ---TMGKPI-GNGHPMGAVVTTR--------EIADSFDNGMEYFNTFGGNPVSCAIGLAVLDIIEDED---LQRNALEIG 915 (1013)
T ss_pred ---eecccc-cCCcceEEEEEcH--------HHHhhccCCCccccCCCCCHHHHHHHHHHHHHHhhcc---HHHHHHHHH
Confidence 578995 5689999999975 576666432 22356778888888888877543222 233444444
Q ss_pred HHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769 324 EICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-- 394 (419)
Q Consensus 324 ~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-- 394 (419)
+++.+.|++ .|.+. ..-.-|+++-+.+.........+ ...+...+ .++||++.+...+ .+.+||.+
T Consensus 916 ~~l~~~L~~l~~~~~~i~--~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~g~~--~~vlr~~Ppl 990 (1013)
T PRK06148 916 NYLLAGLRELQDRFDIIG--DVRGMGLFLGIELVTDRKTKAPATAIARYVKNGA-RERGILIGTEGPH--DNVLKIRPPL 990 (1013)
T ss_pred HHHHHHHHHHHHhCCCce--EEeeeceEEEEEecCCccccCccHHHHHHHHHHH-HhCCeEEeccCCC--CCEEEEeCCc
Confidence 555555443 33222 12244666666664211000011 22345455 5689999774322 47788887
Q ss_pred ecCHHHHHHHHHHHHHHHHHHh
Q 014769 395 CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
..++++++++++.|++++.+..
T Consensus 991 ~it~~~id~~l~~l~~~l~~~~ 1012 (1013)
T PRK06148 991 IFSRADADHLLEVLDDVLAAAL 1012 (1013)
T ss_pred cCCHHHHHHHHHHHHHHHHHHh
Confidence 5799999999999999998753
No 313
>PRK07483 hypothetical protein; Provisional
Probab=99.79 E-value=1.9e-16 Score=151.67 Aligned_cols=355 Identities=16% Similarity=0.099 Sum_probs=210.0
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.-... .-.-+|.+.+++.++++...+.... ....+....+++.+....+ ...+.++++++++
T Consensus 26 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~av~~ql~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~sGs 100 (443)
T PRK07483 26 DATGKRYLDASGGAAVSC-LGHSHPRVIAAIHAQIDRLAYAHTS--FFTTEPAEALADRLVAAAP--AGLEHVYFVSGGS 100 (443)
T ss_pred eCCCCEEEEcCccHhhhc-cCCCCHHHHHHHHHHHHhccCcccc--ccCCHHHHHHHHHHHHhCC--CCCCEEEEcCCcH
Confidence 446899999998843321 1235789999999998764311111 0112444555555544222 2346899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCc---cc-----
Q 014769 118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNW---EV----- 168 (419)
Q Consensus 118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~---~~----- 168 (419)
+|++.+++.... ++ .+|+....+|++....+..... .+..++.....+. ..
T Consensus 101 EAve~AlklAr~~~~~~g~~~r~~Ii~~~~~YHG~t~~a~s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (443)
T PRK07483 101 EAVEAALKLARQYFVEIGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAY 180 (443)
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcCHHHhhhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHH
Confidence 999999887542 33 5689989999886433322211 0111111100000 00
Q ss_pred ---ChHHHHHhhc---CCccEEEEeCC-CC-ccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 169 ---DLDAVEALAD---KNTAAMVIINP-GN-PCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 169 ---~~~~l~~~~~---~~~~~v~i~~p-~n-ptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
.++.+++.+. .+..+.+++.| +. -.| ...+.++++++.++|++||+++|.||++.++...|..+ ....++
T Consensus 181 ~~~~~~~l~~~~~~~~~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~-a~~~~g 259 (443)
T PRK07483 181 GQRLADELEAKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLF-ACEEDG 259 (443)
T ss_pred HHHHHHHHHHHHHhcCCCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHH-HHhhcC
Confidence 0245555443 23445566677 32 235 46789999999999999999999999999876555322 222233
Q ss_pred CCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHHH
Q 014769 240 SIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
..+.++ +++|.+ ..|+ ++|.+++++ ++.+.+... ...+++.++++..++.+.|+...++.
T Consensus 260 v~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~~~-- 325 (443)
T PRK07483 260 VAPDLV---TIAKGL-GAGYQPIGAVLASD--------RIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAEDG-- 325 (443)
T ss_pred CCCCee---eehhhh-ccCccccEEEEEcH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcC--
Confidence 333344 568994 5685 999999976 566666431 12356678888888888876533222
Q ss_pred HHHHHHHHHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccc--cCCC----CHHHHHHHHHHhcCeEeecCCC
Q 014769 314 KLIDTLRESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLL--EDIN----DDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~----~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
..++.++..+++.+.|+ +.|.+.. ...-|++.-+.+..... .... ....+...+ .++||++.+...
T Consensus 326 -l~~~~~~~g~~l~~~L~~l~~~~~~i~~--vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~~~ 401 (443)
T PRK07483 326 -LLANVRARGEQLRARLRERLGQHPHVGD--IRGRGLFVGVELVADRATKAPFDPALKLHARIKREA-MARGLMVYPMGG 401 (443)
T ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCeee--EeecccEEEEEEeecccccCCCCchhhHHHHHHHHH-HHCCcEEEecCc
Confidence 23334444444444443 3432221 22446666666632100 0000 012344455 567999987431
Q ss_pred C--C-CCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 384 V--G-LKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 384 ~--~-~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
. + ..+.+|+.+ ..+++++++++++|++++.+..
T Consensus 402 ~~~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~~ 439 (443)
T PRK07483 402 TIDGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAAL 439 (443)
T ss_pred cccCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 1 1 136899988 4699999999999999998764
No 314
>PRK06149 hypothetical protein; Provisional
Probab=99.79 E-value=1.6e-16 Score=165.83 Aligned_cols=345 Identities=14% Similarity=0.070 Sum_probs=205.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC-CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC-YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~-Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
+|+.++||..|... .-.-+|.+.+++.+++....... |.. ....++.+.+++.+ +-..+.++++++|++
T Consensus 583 dG~~ylD~~~~~~~---lGh~hp~v~~Ai~~q~~~l~~~~~~~~-~~~~elae~L~~~~------p~~~~~v~f~~SGsE 652 (972)
T PRK06149 583 AGRSYLDMVNNVTV---LGHGHPRLAAAAARQWSLLNTNSRFHY-AAVAEFSERLAALA------PDGLDTVFLVNSGSE 652 (972)
T ss_pred CCCEEEECCCCccc---cCCCCHHHHHHHHHHHHhccccccccC-HHHHHHHHHHHHhC------CCCcCEEEEeCCchH
Confidence 58889999877532 12268999999999987643221 211 12234444444443 223468999999999
Q ss_pred HHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-C-----C--------EEEEEeccCC--CCcc-cC-----hHHHH
Q 014769 119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-Q-----V--------EVRHFDLLPE--RNWE-VD-----LDAVE 174 (419)
Q Consensus 119 al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g-----~--------~~~~~~~~~~--~~~~-~~-----~~~l~ 174 (419)
|++.+++.... ....|+...-+|++....+... + . .+..++.... ..+. .+ .+.++
T Consensus 653 A~e~AlklAr~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~ 732 (972)
T PRK06149 653 ANDLAIRLAWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVV 732 (972)
T ss_pred HHHHHHHHHHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHH
Confidence 99999985432 2367888888888754322111 0 0 0111211100 0011 11 13333
Q ss_pred Hhhc-----CCccEEEEeCC--CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769 175 ALAD-----KNTAAMVIINP--GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 175 ~~~~-----~~~~~v~i~~p--~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
..++ .+..+.+|+.| .+-.....|+++++++.++|++||+++|+||++.++...|..+..+..++..+.++
T Consensus 733 ~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv-- 810 (972)
T PRK06149 733 AQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII-- 810 (972)
T ss_pred HHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--
Confidence 3221 23455667777 33334568899999999999999999999999988765554332333333333334
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh--hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD--CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI 325 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (419)
+++|.+ ..|+++|.+++++ ++++.+.. ....+++.++++..++.+.|+...++. ..++.++..++
T Consensus 811 -t~gK~l-g~G~Pl~av~~~~--------~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~e~---l~~~~~~~G~~ 877 (972)
T PRK06149 811 -TMAKGM-GNGHPLGAVITRR--------EIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLREEK---LQENARRVGDH 877 (972)
T ss_pred -Eecccc-cCCeeeEEEEEcH--------HHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHH
Confidence 678995 4689999999976 57776653 112235678888888888887543322 23344444444
Q ss_pred HHHHhhc----CCCCCCCCCCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769 326 CYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA 396 (419)
Q Consensus 326 l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~ 396 (419)
+.+.|++ .|.+.. .-.-|+++-+.+.........+ ...+...+ .++||++.+.... .+.+||.+ ..
T Consensus 878 l~~~L~~l~~~~~~i~~--vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l-~~~Gvl~~~~g~~--~~vl~~~Ppl~i 952 (972)
T PRK06149 878 LKARLEALADRHPLIGA--VHGMGLYLGVELVRDRQTLEPATEETAAICDRL-LELGVIMQPTGDH--LNILKIKPPLCL 952 (972)
T ss_pred HHHHHHHHHHhCCCeEE--EeecceEEEEEEecCcccCCCChHHHHHHHHHH-HhCCeEEeecCCC--CCEEEEECCCcC
Confidence 5555443 332221 2234666666663110000001 23455555 5679999875321 36799887 47
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 014769 397 EPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~~ 414 (419)
+++++++++++|.+++.+
T Consensus 953 t~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 953 DRESADFFVDMLDRVLTE 970 (972)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999999875
No 315
>PLN03032 serine decarboxylase; Provisional
Probab=99.79 E-value=1.2e-15 Score=141.75 Aligned_cols=338 Identities=13% Similarity=0.049 Sum_probs=212.8
Q ss_pred HHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCCCCCCHHHHHHHHHHHHhhCC
Q 014769 26 KTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRAIADYLSRDLP 102 (419)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~ 102 (419)
.++++++...+.++. .+..|.|.. ........+++...+.+...+ .+.-.....++.+.+.+++.+.+|
T Consensus 9 ~~~~~~~~~~~~~~~-----~~~~gy~~~---~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg 80 (374)
T PLN03032 9 ADILASYDKLLAEKS-----SVHFGYPYN---LDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 80 (374)
T ss_pred HHHHHHHHHHHHHhh-----hhccCCCch---hccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC
Confidence 344555555444321 234555432 112334566666665432111 111111346677777777766666
Q ss_pred CCCCCCcE--EEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc
Q 014769 103 YKLSADDV--YVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (419)
Q Consensus 103 ~~~~~~~i--~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (419)
.+++++ ++|+|+|+++..++..... +++.|++..-.|++....++.+|..+..+++++ ++.+|+++|+++++
T Consensus 81 --~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~kaa~~lg~~~~~V~~d~--~g~id~~~L~~~i~ 156 (374)
T PLN03032 81 --LEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMEAVKVPTLP--SGEIDYDDLERALA 156 (374)
T ss_pred --CCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHHHHHcCCCCeEeeeCC--CCcCcHHHHHHHHH
Confidence 355665 9999999999988876542 456888889999999999999999988888754 45799999999997
Q ss_pred C---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC-----CeEEEcccccccccCC-CCCCCccccCCCCcEEEEec
Q 014769 179 K---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-----VMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGS 249 (419)
Q Consensus 179 ~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-----~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s 249 (419)
+ ++.+|+++..+|+||.+-| +++|.++|+++| +++++|.+|+++...- ...+.+ .+.. .-..+..|
T Consensus 157 ~~~~~~~lvv~tagtt~tG~idp---i~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~-~~~~-~vDSis~s 231 (374)
T PLN03032 157 KNRDKPAILNVNIGTTVKGAVDD---LDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEV-TFRK-PIGSVSVS 231 (374)
T ss_pred HcCCCCEEEEEEecCcCCccCCC---HHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCccc-CCCc-CCcEEEEC
Confidence 6 3567777888999999998 889999999986 5899999998743210 000111 1111 11234558
Q ss_pred CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
.+|.+ .....+|.+++++. ..+.+..... ..++-+.....++-..|.....+.+.++.++..+
T Consensus 232 ~HK~~-g~P~g~G~ll~r~~--------~~~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~~~~ 302 (374)
T PLN03032 232 GHKFL-GCPMPCGVALTRKK--------HVKALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQHCMR 302 (374)
T ss_pred ccccc-CCCcCeEEEEEEch--------hhHhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 99984 44566999998762 3333322111 1122222222333334444446788899999999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHH
Q 014769 322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPS 399 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~ 399 (419)
+.+++.+.|++. ++.++..|.... +.++-+. +. .+ . +|..+.+- .+++|+++ ..+.+
T Consensus 303 ~a~~l~~~l~~~-~~~~~~~p~~~~-V~f~~~~--------~~----~~-~-~~w~l~~~-----~~~~hi~vm~~~~~~ 361 (374)
T PLN03032 303 NAHYLKDRLTEA-GLTCRLNELSST-VVFERPM--------DE----AF-I-KKWQLACE-----GDIAHVVVMPNVTVE 361 (374)
T ss_pred HHHHHHHHHHhC-CCcEEECCCceE-EEEcCCC--------cH----hH-h-heeeeccc-----CCEEEEEECCCCCHH
Confidence 999999999886 666555666443 3333331 11 12 2 35655542 35889998 35779
Q ss_pred HHHHHHHHHHH
Q 014769 400 ALKDGLGRMKA 410 (419)
Q Consensus 400 ~l~~~l~~l~~ 410 (419)
.++++++.|++
T Consensus 362 ~id~fi~dl~~ 372 (374)
T PLN03032 362 KLDEFVEELVE 372 (374)
T ss_pred HHHHHHHHHhc
Confidence 99999988875
No 316
>PRK12403 putative aminotransferase; Provisional
Probab=99.79 E-value=3.1e-16 Score=150.89 Aligned_cols=353 Identities=16% Similarity=0.133 Sum_probs=203.3
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+...+|+.+|||..|.-+..-. .-+|.+.+++.++++.... +... .+..+....+++.+....+ ...+.+++++
T Consensus 48 l~D~dG~~ylD~~~g~~~~~lG-h~hp~v~~A~~~q~~~~~~--~~~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~ 122 (460)
T PRK12403 48 LWDNDGKRYLDGMSGLWCTNLG-YGRKDLAAAAARQMEQLPY--YNMFFHTTHPAVIELSELLFSLLP--GHYSHAIYTN 122 (460)
T ss_pred EEeCCCCEEEECchhHHhhcCC-CCCHHHHHHHHHHHHhCCC--eecccccCCHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence 3344688999998883322112 2579999999999876332 1111 1223444445555443222 2236899999
Q ss_pred cHHHHHHHHHHHhcC-------CCC-eEEeeCCCCCCcHHHHhhc-CCE-----------EEEEeccCC--CCccc----
Q 014769 115 GCKQAVEVILSVLAR-------PGA-NVLLPRPGWPYYEGIAQRK-QVE-----------VRHFDLLPE--RNWEV---- 168 (419)
Q Consensus 115 g~~~al~~~~~~l~~-------~gd-~vlv~~p~~~~~~~~~~~~-g~~-----------~~~~~~~~~--~~~~~---- 168 (419)
++++|++.+++.... +++ .|+....+|++........ +.. +..++.+.. .++..
T Consensus 123 SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 202 (460)
T PRK12403 123 SGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAE 202 (460)
T ss_pred CcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhhhcCCCccccccCCCCCCCEEeCCCcccccccCCChHH
Confidence 999999999998742 233 3555677888753322221 111 111111000 00011
Q ss_pred ----ChHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 169 ----DLDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 169 ----~~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
+.+.+++.+. .+..+.+|+.| ..-.|. ..+.++++++.++|++||+++|+||++.++...|..+. ...++
T Consensus 203 ~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a-~e~~g 281 (460)
T PRK12403 203 FGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVIGGFGRTGEWFA-HEHFG 281 (460)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhh-hhhcC
Confidence 1244544442 13345566676 445565 46889999999999999999999999988766554322 22233
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
..+.++ +++|.+ ..| +++|.+++++ ++.+.+... ...+++.++++..++.+.|+...++.
T Consensus 282 v~PDiv---~~gK~l-ggG~~Piga~v~~~--------~i~~~~~~~~~~~~~~~T~~gnPl~~Aaala~L~~i~~~~-- 347 (460)
T PRK12403 282 FEPDTL---SIAKGL-TSGYVPMGGLVLSK--------RIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEG-- 347 (460)
T ss_pred CCCCeE---EEcccc-cccccceEEEEECH--------HHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHhcc--
Confidence 333334 478995 457 4899988865 566666421 12355678888888888877543222
Q ss_pred HHHHHHH-HHHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCccccc--CCCC----HHHHHHHHHHhcCeEeecCC
Q 014769 314 KLIDTLR-ESAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLLE--DIND----DIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 314 ~~~~~~~-~~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~~--~~~~----~~~~~~~ll~~~gv~v~~g~ 382 (419)
..++++ ++.+++.+.|+ +.+.+. ....-|.+..+.+...... .... ...+... +.++||.+.+..
T Consensus 348 -l~~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Gll~~~~~ 423 (460)
T PRK12403 348 -VVTRVKDDTGPYLQRCLREVFGDHPLVG--EVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTI-GFEEGVIIRSTL 423 (460)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhcCCCEE--eEeecceEEEEEEccCccccccccchhHHHHHHHHH-HHhCCEEEEecC
Confidence 233332 33444444443 343222 1234466666666321100 0000 1122223 356799997532
Q ss_pred CCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 383 YVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 383 ~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+.+|+++. .++++++++++.+++++.+..+
T Consensus 424 -----~~~~l~Ppl~it~~eid~~~~~l~~al~~~~~ 455 (460)
T PRK12403 424 -----GRMIMAPALVAGRAEIDELVDKTRIAVDRTAR 455 (460)
T ss_pred -----CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45788884 5999999999999999988754
No 317
>PRK07480 putative aminotransferase; Validated
Probab=99.79 E-value=1.5e-16 Score=152.86 Aligned_cols=355 Identities=13% Similarity=0.094 Sum_probs=207.0
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|..... .-.-+|.+.+++.++++...... .......+.+..+++.+.+..+ .+.+.++++++
T Consensus 44 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~-~~~~~~~~~~~~lae~L~~~~p--~~~~~v~f~~S 119 (456)
T PRK07480 44 LWDSEGNKILDGMAGLWCVN-VGYGRKELADAAARQMRELPYYN-TFFKTTHPPAIELAAKLAEVAP--PGFNHVFFTNS 119 (456)
T ss_pred EEeCCCCEEEEccchHHHhc-CCCCCHHHHHHHHHHHHhcCCcc-cccccCCHHHHHHHHHHHHhCC--CCcCEEEEeCC
Confidence 33456899999988743221 12357999999999987643211 0001223455555555554332 23468999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-E------------EEEEeccCCC--CcccC---
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-E------------VRHFDLLPER--NWEVD--- 169 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-~------------~~~~~~~~~~--~~~~~--- 169 (419)
+++|++.+++.... ++ .+|+....+|++........+. . +..++.+... .+..+
T Consensus 120 GseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~s~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 199 (456)
T PRK07480 120 GSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEE 199 (456)
T ss_pred cHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhhccCChhhhcccCCCCCCCeecCCCcccccccCCChHH
Confidence 99999999987632 23 4688888899875432222111 0 0111100000 00001
Q ss_pred -----hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 170 -----LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 170 -----~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
++.+++.+. .+..+.+|..| +.-.|. ..|.++++++.++|++||+++|+||++.+|...|..+ ....++
T Consensus 200 ~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a~~~~g 278 (456)
T PRK07480 200 FGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRKYDILLVADEVICGFGRTGEWF-GSQHFG 278 (456)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCcchh-hhhhcC
Confidence 244544332 13345566666 444566 5788999999999999999999999999875555432 222333
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh----h-hccccCCchHHHHHHHHHHcccchHHHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD----C-LSIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~----~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
..+.++ +++|.+ ..| +++|.+++++ ++.+.+.. . ...+++.++++..++.+.|+...++.
T Consensus 279 v~PDiv---~~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~Aaa~a~L~~l~~~~-- 344 (456)
T PRK07480 279 IKPDLM---TIAKGL-TSGYIPMGAVGVGD--------RVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEG-- 344 (456)
T ss_pred CCCCee---eeehhh-ccCCccceEEEEcH--------HHHHHHhcCCCCcccCCCCCcCHHHHHHHHHHHHHHHhCC--
Confidence 333333 678985 456 4899999865 57776631 1 23366788888888888887643222
Q ss_pred HHHHHH-HHHHHHHHHHhh---cCCCCCCCCCCCceEEEEeecCcccc--cCCCC---HHHHHHHHHHhcCeEeecCCCC
Q 014769 314 KLIDTL-RESAEICYDGVK---EIPCISCPNKPEGSMVTMVKLNPWLL--EDIND---DIEFALKLAKEESVIVTPGIYV 384 (419)
Q Consensus 314 ~~~~~~-~~~~~~l~~~l~---~~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~---~~~~~~~ll~~~gv~v~~g~~~ 384 (419)
..+++ +++.+++.+.|+ +.|.+.. ...-|++.-+.+..... ....+ ....+...+.++||++.+.
T Consensus 345 -l~~~~~~~~g~~l~~~l~~l~~~~~i~~--vrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~--- 418 (456)
T PRK07480 345 -IVERVRDDTGPYLQKRLRELADHPLVGE--VRGVGLVGAIELVKDKATRERFEAGGGVGTICRDHCFANGLIMRAV--- 418 (456)
T ss_pred -HHHHHHHHHHHHHHHHHHHhhcCCCeee--EEeecceEEEEEeccccccccCcchhhHHHHHHHHHHHCCcEEeec---
Confidence 22333 233344444443 3332221 22346666666632110 00001 1122333345689999763
Q ss_pred CCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 385 GLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 385 ~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+.+|+++. .++++|++++++|.+++.+..+
T Consensus 419 --~~~l~~~Ppl~it~~eid~~~~~l~~al~~~~~ 451 (456)
T PRK07480 419 --GDRMIISPPLVITHAEIDELVEKARKALDATAA 451 (456)
T ss_pred --CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 257899984 4899999999999999987644
No 318
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.79 E-value=1.4e-16 Score=153.23 Aligned_cols=352 Identities=13% Similarity=0.070 Sum_probs=210.3
Q ss_pred hcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 37 NKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 37 ~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
...+|+.+|||..|.-... .-.-+|.+.+++.+++...... ....-..+.+..+++.+.+.. +...+.+++++++
T Consensus 51 ~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~l~~~--~~~~~~~~~~~~lae~L~~~~--p~~~~~v~f~~SG 125 (460)
T PRK06916 51 YDVNGNEYYDGVSSIWLNV-HGHQVPELDEAIREQLNKIAHS--TLLGLANVPSILLAEKLIEVV--PEGLKKVFYSDSG 125 (460)
T ss_pred EeCCCCEEEEcchhHHHhh-cCCCCHHHHHHHHHHHHhCCCc--cccccCCHHHHHHHHHHHHhC--CCCCCEEEEeCCc
Confidence 3446889999987742211 1235789999999998763211 000011233444555554422 2223689999999
Q ss_pred HHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCC--Ccc------
Q 014769 117 KQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPER--NWE------ 167 (419)
Q Consensus 117 ~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~------ 167 (419)
++|++.+++.... +| .+|+....+|++....+...+. .+..++..... .+.
T Consensus 126 seAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 205 (460)
T PRK06916 126 ATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEI 205 (460)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccccCCCCCCCEEeCCCcccccccCCChHHH
Confidence 9999999987642 33 6899999999986543332211 11122211000 000
Q ss_pred --cChHHHHHhhcC--CccEEEEeCC--CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 168 --VDLDAVEALADK--NTAAMVIINP--GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 168 --~~~~~l~~~~~~--~~~~v~i~~p--~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.+++.+++.++. +..+.+|+.| +.-.|.+ .|.++++++.++|+++|+++|.||++.++...|..+ ....++.
T Consensus 206 ~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~-a~~~~gv 284 (460)
T PRK06916 206 VKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVATGFGRTGKMF-ACEHENV 284 (460)
T ss_pred HHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHcCCEEEeechhhCCCcCchhh-HHHhcCC
Confidence 124555666642 3345566666 5556764 699999999999999999999999998875555432 1222333
Q ss_pred CCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------h-hccccCCchHHHHHHHHHHcccchHH
Q 014769 241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------C-LSIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~-~~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
.+.++ +++|.+ ..| +++|.+++++ ++.+.+.. . ...+++.++++..++.+.|+....+
T Consensus 285 ~PDiv---~~gK~l-~gG~~Pi~av~~~~--------ei~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~- 351 (460)
T PRK06916 285 TPDIM---TAGKGL-TGGYLPIAITVTTD--------EIYNAFYGDYEEQKTFFHGHSYTGNPLGCAVALANLELYEKT- 351 (460)
T ss_pred CCCee---eeehhh-hcCccccceeeecH--------HHHHHhhccccccCccccCCCCCCCHHHHHHHHHHHHHHHhc-
Confidence 33334 578995 467 5999999875 56665532 1 1234566888888877777653222
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccc--cCCC-C---HHHHHHHHHHhcCeEeecCC
Q 014769 312 FCKLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLL--EDIN-D---DIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~--~~~~-~---~~~~~~~ll~~~gv~v~~g~ 382 (419)
...++++++.+++.+.|+++ +.+.. ...-|.++-+.+..... .... + ...+...+ .++||++.|.
T Consensus 352 --~l~~~~~~~g~~l~~~l~~l~~~~~v~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~i~~~~-~~~Gvl~~~~- 425 (460)
T PRK06916 352 --NLIEQVARKTEYVATQLEDLFALKHVGD--IRQLGLMVGIELVKNKETKEPFEWTERVGVQVCKRS-RELGMLTRPL- 425 (460)
T ss_pred --cHHHHHHHHHHHHHHHHHHhhcCCCeEE--eecCCceeeEEeecccccccCCCchhhHHHHHHHHH-HHCCeEEEec-
Confidence 23345555555666665543 22211 22335555555532110 0000 1 12444444 5689999874
Q ss_pred CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+.+|+.+ ..++++|++++++|+++++++..
T Consensus 426 ----g~~l~~~Ppl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 426 ----GNTIVFMPPLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred ----CCEEEEeCCcccCHHHHHHHHHHHHHHHHhhcc
Confidence 25788886 57999999999999999987654
No 319
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.79 E-value=2.8e-16 Score=150.34 Aligned_cols=344 Identities=14% Similarity=0.090 Sum_probs=205.7
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.-... .-.-+|.+.+++.+++.......+. .+.+..+++.+.+..+ ..+.++++++++
T Consensus 49 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~ai~~q~~~~~~~~~~-----~~~~~~la~~l~~~~p---~~~~v~f~~sGs 119 (428)
T PRK12389 49 DVDGNKYIDYLAAYGPII-TGHAHPHITKAITEAAENGVLYGTP-----TELEIEFAKMLKEAIP---SLEKVRFVNSGT 119 (428)
T ss_pred eCCCCEEEEccccccccc-cCCCCHHHHHHHHHHHHhCCccCCC-----CHHHHHHHHHHHHhCC---CCcEEEEeCCHH
Confidence 446889999988843321 1235799999999999865432222 2344555555544222 246899999999
Q ss_pred HHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhc-CCEEEEE------eccC---CCCc---ccChHHHHHhhcC--C
Q 014769 118 QAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRK-QVEVRHF------DLLP---ERNW---EVDLDAVEALADK--N 180 (419)
Q Consensus 118 ~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~-g~~~~~~------~~~~---~~~~---~~~~~~l~~~~~~--~ 180 (419)
+|++.+++.... .| .+|+....+|++....+... +...... ...+ .+.. -.|++.+++.+.. +
T Consensus 120 eA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 199 (428)
T PRK12389 120 EAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPKSIAQEVITVPFNDIEALKEALDKWGD 199 (428)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCCCcccCceEEcCCCCHHHHHHHHHhcCC
Confidence 999999987643 23 67888899999865443322 1111000 0000 0000 1267788777753 2
Q ss_pred ccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
..+.++..| ....|.+ .+.+++++|.++|+++|+++|+||++.++. .+... ....++..++++ +++|.+ ..|
T Consensus 200 ~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~R-t~~~~-a~~~~gv~PDiv---t~gK~l-ggG 273 (428)
T PRK12389 200 EVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFR-FMYGG-AQDLLGVEPDLT---ALGKII-GGG 273 (428)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccc-cCcch-hhHHhCCCCCee---eechhh-cCC
Confidence 345566666 5556764 579999999999999999999999999873 22111 111122222233 678995 568
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc--
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-- 332 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 332 (419)
+++|.+++++ ++++.+... ...+++.++++..++.+.|+....+ ...++++++.+++.+.|++
T Consensus 274 ~Pi~av~~~~--------~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~ 342 (428)
T PRK12389 274 LPIGAYGGRK--------DIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAA 342 (428)
T ss_pred CceeEEeEHH--------HHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHH
Confidence 9999998865 577766421 2235567888888888877754322 2334455555555555543
Q ss_pred --CCCCCCCCCCCceEEEEeecCcccccC-----CCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHH
Q 014769 333 --IPCISCPNKPEGSMVTMVKLNPWLLED-----IND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALK 402 (419)
Q Consensus 333 --~~~~~~~~~p~~g~~~~~~~~~~~~~~-----~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~ 402 (419)
++.+..+ .-..|++ -+.+....... ..+ ...+...+ .++||.+.+.. .+.+.+++..++++|+
T Consensus 343 ~~~~~~~~v-~r~~g~~-gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~----~~~~~~~l~~t~e~id 415 (428)
T PRK12389 343 EKHGITITI-NRLKGAL-TVYFTDEKVTNYDQAERSDGEAFGKFFKLM-LNQGINLAPSK----YEAWFLTTAHTEEDIE 415 (428)
T ss_pred HhCCCCEEE-EecCcEE-EEEEeCCCCCChhhhcccCHHHHHHHHHHH-HHCCcEeecCC----CCCeeecCCCCHHHHH
Confidence 4311111 1223433 23332111000 001 23444444 56899998752 1234667778999999
Q ss_pred HHHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQR 414 (419)
Q Consensus 403 ~~l~~l~~~~~~ 414 (419)
++++.+++++++
T Consensus 416 ~~~~~l~~~l~~ 427 (428)
T PRK12389 416 ETLEAVDRAFAQ 427 (428)
T ss_pred HHHHHHHHHHHh
Confidence 999999999865
No 320
>PRK07036 hypothetical protein; Provisional
Probab=99.79 E-value=2.3e-16 Score=151.93 Aligned_cols=352 Identities=15% Similarity=0.148 Sum_probs=209.8
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC-CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF-NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~-~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+...+|+.+|||..|..+.. .-.-+|.+.+++.+++....+ ..+. ....+.+..+++.+.+..+ ...+.+++++
T Consensus 45 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~~~~--~~~~~~~~~lae~L~~~~p--~~~~~v~f~~ 119 (466)
T PRK07036 45 VTDADGRRYLDGIGGMWCVN-VGYGREEMADAIADQARRLPYYTPFG--DMTNAPAAELAAKLAELAP--GDLNHVFLTT 119 (466)
T ss_pred EEECCCCEEEECcccHHhhc-CCCCCHHHHHHHHHHHHhCccccccc--ccCCHHHHHHHHHHHHhCC--CCcCEEEEeC
Confidence 44456999999988843322 123579999999999875321 1111 0123455556666654322 2246899999
Q ss_pred cHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCC--CCcccC--
Q 014769 115 GCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE--RNWEVD-- 169 (419)
Q Consensus 115 g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~--~~~~~~-- 169 (419)
++++|++.+++.... ++ .+|+....+|++....+..... .+..++.+.. ..++.+
T Consensus 120 sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 199 (466)
T PRK07036 120 GGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEA 199 (466)
T ss_pred CchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccccCCCCCcEEecCCcccccccCCChH
Confidence 999999999987531 22 6789999999886543322211 1112221110 001111
Q ss_pred ------hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc-c
Q 014769 170 ------LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-L 237 (419)
Q Consensus 170 ------~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~ 237 (419)
++.+++.+. .+..+.+|+.| +...|. ..|.++++++.++|++||+++|+||++.++...|..+ .+. .
T Consensus 200 ~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-~~~~~ 278 (466)
T PRK07036 200 AFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRLGHFF-ASEAV 278 (466)
T ss_pred HHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCcCchhh-hhhhh
Confidence 233444442 23445566666 444566 5789999999999999999999999998875555322 222 2
Q ss_pred cCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------hh-ccccCCchHHHHHHHHHHcccc
Q 014769 238 FGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------CL-SIYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~l~~~~ 308 (419)
++..+.++ +++|.+ ..| +++|.+++++ ++.+.+.. +. ..+++.++++..++.+.|+...
T Consensus 279 ~gv~PDiv---t~gK~l-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~Le~i~ 346 (466)
T PRK07036 279 FGIQPDII---TFAKGL-TSGYQPLGAVIISE--------RLLDVISGPNAKGNVFTHGFTYSGHPVACAAALKNIEIME 346 (466)
T ss_pred cCCCCCEE---EEcccc-ccCccccEEEEEcH--------HHHHHHhcccCcCcccccCCCCCCCHHHHHHHHHHHHHHH
Confidence 23333333 578995 457 5899999875 57666642 11 2256678888888888776532
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccc-c-CCCC----HHHHHHHHHHhcCeEee
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLL-E-DIND----DIEFALKLAKEESVIVT 379 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~-~-~~~~----~~~~~~~ll~~~gv~v~ 379 (419)
++ ...++++++.+++.+.|++ .|.+. ....-|.++.+.+..... . .... ...+...+ .++||++.
T Consensus 347 ~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~--~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~ 420 (466)
T PRK07036 347 RE---GLCEHVREVGPYFEERLASLRELPLVG--DVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHC-QERGLLVR 420 (466)
T ss_pred hC---CHHHHHHHHHHHHHHHHHHhccCCCEE--EEEeeceEEEEEEccCccccCCCCchhHHHHHHHHHH-HHCCcEEe
Confidence 22 2334445555555555543 32221 122346666777742110 0 0001 12444444 66899997
Q ss_pred cCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 380 PGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 380 ~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.. +.+|+++ ..++++|+++++++.++++++.
T Consensus 421 ~~~-----~~~~l~Ppl~it~~~id~~~~~l~~al~~~~ 454 (466)
T PRK07036 421 PLE-----HLCVLSPPLIITRAQIDEIVAILRAAIEETA 454 (466)
T ss_pred ecC-----CEEEEeCCCcCCHHHHHHHHHHHHHHHHHHH
Confidence 642 4688886 4699999999999999997763
No 321
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.79 E-value=1.6e-16 Score=144.06 Aligned_cols=182 Identities=20% Similarity=0.101 Sum_probs=137.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 160 (419)
-...+.+.+++.. +..+++++++|+.|+..++..++.+|+.|+.....|.+...++ ...|+....+.+
T Consensus 78 t~~~le~~iaal~--------ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~ 149 (409)
T KOG0053|consen 78 TRDVLESGIAALE--------GAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDV 149 (409)
T ss_pred chHHHHHHHHHHh--------CCceEEEecccHHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeech
Confidence 4467888888775 3466999999999999999999999999999999999865444 455666666543
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
-+++.++.++.+++++|++-+|.||+..+.+ ++++.++|+++|+++|+|+.+....+. ....++.
T Consensus 150 -------~~~~~~~~~i~~~t~~V~~ESPsNPll~v~D---I~~l~~la~~~g~~vvVDnTf~~p~~~-----~pL~lGA 214 (409)
T KOG0053|consen 150 -------DDLKKILKAIKENTKAVFLESPSNPLLKVPD---IEKLARLAHKYGFLVVVDNTFGSPYNQ-----DPLPLGA 214 (409)
T ss_pred -------hhHHHHHHhhccCceEEEEECCCCCcccccc---HHHHHHHHhhCCCEEEEeCCcCccccc-----ChhhcCC
Confidence 2678888999989999999999999999998 888999999999999999999864321 1223444
Q ss_pred CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHH
Q 014769 241 IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGA 299 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a 299 (419)
+ |++.|.+|.++..+-= .|.++.+. .++.+.++.... ..+.+++.....
T Consensus 215 D---IV~hSaTKyi~Ghsdvi~G~iv~n~-------~~~~~~l~~~~~~lg~~~~p~~~~l 265 (409)
T KOG0053|consen 215 D---IVVHSATKYIGGHSDVIGGSVVLNS-------EELASRLKFLQEDLGWCEDPFDLFL 265 (409)
T ss_pred C---EEEEeeeeeecCCcceeeeEEecCc-------HHHHHHHHHHHHHhcCCCCHHHHHH
Confidence 4 9999999998776544 45555542 257777776653 345555554433
No 322
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.79 E-value=1.6e-16 Score=152.53 Aligned_cols=343 Identities=15% Similarity=0.109 Sum_probs=203.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||..|..... .-..+|.+.+++.+++..... +.. ..+.+..+++.+.+..+ ..+.+.+++++++
T Consensus 96 ~dG~~yiD~~~g~g~~~-lGh~~p~v~~av~~ql~~~~~--~~~---~~~~~~~lAe~l~~~~p---~~~~v~f~~SGsE 166 (474)
T PLN02482 96 VDGNEYIDYVGSWGPAI-IGHADDEVLAALAETMKKGTS--FGA---PCLLENVLAEMVIDAVP---SVEMVRFVNSGTE 166 (474)
T ss_pred CCCCEEEEecccccccc-cCCCCHHHHHHHHHHHhhCCC--CCC---CCHHHHHHHHHHHHhCC---CCCEEEEeCChHH
Confidence 35888999988743321 123579999999999986543 222 12455566666655332 2479999999999
Q ss_pred HHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHh-hcCCEEEEE--ecc---CC----C----CcccChHHHHHhhcC--C
Q 014769 119 AVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQ-RKQVEVRHF--DLL---PE----R----NWEVDLDAVEALADK--N 180 (419)
Q Consensus 119 al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~-~~g~~~~~~--~~~---~~----~----~~~~~~~~l~~~~~~--~ 180 (419)
|.+.+++.... .| .+|+....+|+++...+. ..+...... +.. +. . .+ -|++.+++.+.. +
T Consensus 167 A~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-nd~~~l~~~l~~~~~ 245 (474)
T PLN02482 167 ACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVPKAATSATLTAPY-NDLEAVKKLFEANKG 245 (474)
T ss_pred HHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCCCCCCCCeEEecC-CChHHHHHHHHhCCC
Confidence 99999987643 23 688888999998653211 110000000 000 00 0 00 167888877753 3
Q ss_pred ccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
..+.+|+.| ....|.+ .+.++|+++.++|++||+++|+||++.++ ..+... ....++..+.+ .+++|.+ ..|
T Consensus 246 ~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~tGf-R~g~~g-a~~~~gv~PDi---~t~gK~l-ggG 319 (474)
T PLN02482 246 EIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGG-AQEYFGITPDL---TTLGKVI-GGG 319 (474)
T ss_pred ceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCe-ecCcch-HhHHhCCCCCE---EEecchh-hCC
Confidence 345666777 4556765 45899999999999999999999999877 333221 11122322223 3679996 478
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC-
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI- 333 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~- 333 (419)
+++|.+++++ ++++.+... ...+++.++++..++.+.|+.... +...+++.++.+++++.|+++
T Consensus 320 ~Pigav~g~~--------ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~---~~~~~~~~~~g~~l~~~L~~l~ 388 (474)
T PLN02482 320 LPVGAYGGRR--------EIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQ---PGTYEYLDKITKKLIQGILEAG 388 (474)
T ss_pred CceEEEEEcH--------HHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhc---cCHHHHHHHHHHHHHHHHHHHH
Confidence 9999998865 677776521 122445677777777777765322 123444555555555555442
Q ss_pred --CCCCCCCCCCceEEEEeecCcccc---cC--CCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHH
Q 014769 334 --PCISCPNKPEGSMVTMVKLNPWLL---ED--IND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKD 403 (419)
Q Consensus 334 --~~~~~~~~p~~g~~~~~~~~~~~~---~~--~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~ 403 (419)
-++.++....+|++. +.+..... .. ..+ ...+...+ .++||++.|... +.+ -+++..++++|++
T Consensus 389 ~~~g~~~~~~~v~g~~g-i~f~~~~~~~~~~~~~~d~~~~~~~~~~l-~~~Gv~~~~~~~---~~~-~psl~ht~~dId~ 462 (474)
T PLN02482 389 KKAGHEMCGGYISGMFG-FFFTEGPVYNFADAKKSDTAKFARFHRGM-LEEGVYLAPSQF---EAG-FTSLAHTEEDIDF 462 (474)
T ss_pred HhcCCCEEEcccceEEE-EEEecCCccChhhhccCCHHHHHHHHHHH-HHCCeEEeccCC---CCC-cCCCCCCHHHHHH
Confidence 022211122234432 22211000 00 011 12455555 567999987432 111 1566789999999
Q ss_pred HHHHHHHHHHH
Q 014769 404 GLGRMKAFCQR 414 (419)
Q Consensus 404 ~l~~l~~~~~~ 414 (419)
+++.+++++++
T Consensus 463 ~l~al~~~l~~ 473 (474)
T PLN02482 463 TIAAAERVLAR 473 (474)
T ss_pred HHHHHHHHHHh
Confidence 99999999875
No 323
>PRK07481 hypothetical protein; Provisional
Probab=99.79 E-value=6.1e-16 Score=148.61 Aligned_cols=354 Identities=14% Similarity=0.089 Sum_probs=209.5
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-+.. .-.-+|.+.+++.+++.......... ....+.+..+++.+.+..+ +-..+.++++++
T Consensus 36 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~~~~~~-~~~~~~~~~lae~L~~~~~-~~~~~~v~f~~s 112 (449)
T PRK07481 36 VYDIDGKKLLDGVGGLWNVN-VGHNREEVKEAIVRQLDELEYYSTFD-GTTHPRAIELSYELIDMFA-PEGMRRVFFSSG 112 (449)
T ss_pred EEeCCCCEEEECchhHHhhc-CCCCCHHHHHHHHHHHHhccceeccc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEcCc
Confidence 44456999999988743321 12357899999999987643211100 0123445556666654332 112468999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCC--Ccc-cChH
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPER--NWE-VDLD 171 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~-~~~~ 171 (419)
+++|++.+++.... +| .+|+....+|++....+..... .+..++.+... .+. -|.+
T Consensus 113 GsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~ 192 (449)
T PRK07481 113 GSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPE 192 (449)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhhccCCCcccccccCCCCCCCEEeCCCcccccccCCCCHH
Confidence 99999999987642 23 5799999999986543322211 11111111000 011 1333
Q ss_pred H--------HHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 172 A--------VEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 172 ~--------l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
. +++.+. .+..+.+|+.| +.-.|. ..+.++++++.++|+++|+++|.||++.++...|..+. ...+
T Consensus 193 ~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a-~~~~ 271 (449)
T PRK07481 193 ELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVCDRHGILLIADEVVTGFGRTGSWFG-SRGW 271 (449)
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHHHHcCCEEEEeehhhCcCcCchhhH-hhhc
Confidence 3 233332 23445566666 444566 57899999999999999999999999998765554321 2223
Q ss_pred CCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccch
Q 014769 239 GSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
+..+.++ +++|.+ ..| +++|.+++++ ++++.+... ...+++.++++..++.+.|+...+
T Consensus 272 gv~PDiv---~~gKgl-~gG~~Pi~av~~~~--------~i~~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~l~~ 339 (449)
T PRK07481 272 GVKPDIM---CLAKGI-TSGYVPLGATMVNA--------RIADAFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVR 339 (449)
T ss_pred CCCCCEE---EEeecc-cCCCcCceEEEEcH--------HHHHHHhccCccccccccCCCCCCCHHHHHHHHHHHHHHHh
Confidence 3333344 468984 457 5899999875 566666431 123566788888888887765332
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-cc-CCC----CHHHHHHHHHHhcCeEee
Q 014769 310 DFFCKLIDTLRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LE-DIN----DDIEFALKLAKEESVIVT 379 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~-~~~----~~~~~~~~ll~~~gv~v~ 379 (419)
+. ..++.++..+++.+.|++ +|.+. ....-|.++.+.+.... .. ... ....+...+ .++||++.
T Consensus 340 ~~---l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Glm~gi~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~ 413 (449)
T PRK07481 340 ED---LPANAAKRGAYLLEGLQPLKERFELVG--DVRGKGLMLALDLVADKATREPIDPSKGYANAVADVA-RENGVLVR 413 (449)
T ss_pred hh---HHHHHHHHHHHHHHHHHHHhhcCCCeE--EEeecceEEEEEecccccccCCCCchhHHHHHHHHHH-HhCCeEEE
Confidence 22 233444444445555443 32221 12234666666663210 00 000 012344444 56899998
Q ss_pred cCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 380 PGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 380 ~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.. +.+|+++ ..++++|+++++.+.++++++.
T Consensus 414 ~~g-----~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~ 447 (449)
T PRK07481 414 PSG-----TKIILSPPLVIQREDVDRIVDALDAGLSAVP 447 (449)
T ss_pred ecC-----CEEEEECCCCCCHHHHHHHHHHHHHHHHhcc
Confidence 742 3589997 4699999999999999998753
No 324
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.78 E-value=6.4e-17 Score=151.39 Aligned_cols=314 Identities=12% Similarity=0.063 Sum_probs=195.7
Q ss_pred CCChHHHHHHHHHHHhCCC-CCCCCC--CCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEc-ccHHHHHHHHHHHhcCCCC
Q 014769 58 FRTAVEAEDAIVDAVRSGK-FNCYAT--NSGIPPARRAIADYLSRDLPYKLS-ADDVYVT-LGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~-~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t-~g~~~al~~~~~~l~~~gd 132 (419)
...++.+++++........ .+.+.+ ..-+.+.|+.+++++ +++ ..+|+++ +|+|.+++.++..+..+ +
T Consensus 12 ~~~~~~v~~a~~~~~~~~~~~~hr~~~f~~~~~~~r~~l~~l~------~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~ 84 (361)
T TIGR01366 12 SKVRLEQLQALTTTAASLFGTSHRQAPVKNLVGRVREGLAELF------SLPDGYEVILGNGGATAFWDAATFGLIEK-K 84 (361)
T ss_pred cCCCHHHHHHHHhcCccccccCcCChHHHHHHHHHHHHHHHHh------CCCCCceEEEECCchhHHHHHHHHhcccc-c
Confidence 3577889998765421110 112222 234467788888887 443 3478775 66999999999998743 3
Q ss_pred eEEeeCCCCCC-cHHHHhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHH
Q 014769 133 NVLLPRPGWPY-YEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA 209 (419)
Q Consensus 133 ~vlv~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~ 209 (419)
.+++....|.. +...+... +.++..++.+. +..++. .+.++++.|.+++..|.||...| +++| +
T Consensus 85 ~l~i~~G~~~~~~~~~a~~~~~~~~~~~~~~~~--~~~~~~-----~~~~~~~lV~~~h~et~tG~~~p---i~~I---~ 151 (361)
T TIGR01366 85 SLHLSFGEFSSKFAKAVKLAPWLGEPIIVTADP--GSAPEP-----QADPGVDVIAWAHNETSTGVAVP---VRRP---E 151 (361)
T ss_pred ccEEecCHHHHHHHHHHHhhhccCCceEEecCC--CCCCCC-----ccCCCCCEEEEcccCCccceecc---cccc---c
Confidence 44444444532 23333331 22556665432 222332 34568899999999999999999 5555 4
Q ss_pred HhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH------
Q 014769 210 RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK------ 283 (419)
Q Consensus 210 ~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~------ 283 (419)
+++|+++++|.+++. +..+..+.. ..+++.|.+|.++.+|. ++.+++++ +..+++.
T Consensus 152 ~~~g~~~iVDavqs~----g~~~idv~~-----~D~~~~s~~K~lg~~~G-l~~~~~s~--------~~~~~~~~~~~~~ 213 (361)
T TIGR01366 152 GSDDALVVIDATSGA----GGLPVDIAE-----TDVYYFAPQKNFASDGG-LWLAIMSP--------AALERIEAIAASG 213 (361)
T ss_pred ccCCCeEEEEcCccc----cCCCCCHHH-----CCEEEEEchhhcCCCCc-eEEEEECH--------HHHhhhhcccCCC
Confidence 789999999999987 333333332 22678899999887742 55555544 1222221
Q ss_pred --------------hh--hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---
Q 014769 284 --------------DC--LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--- 343 (419)
Q Consensus 284 --------------~~--~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--- 343 (419)
.. ....++++.....++.++++..... .++...++.++..+.+++.+.+++.+..+....
T Consensus 214 ~~~p~~~d~~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~ 293 (361)
T TIGR01366 214 RWVPEFLSLPTAVDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKR 293 (361)
T ss_pred CCCchhhhHHHHHhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhc
Confidence 11 0223455555555666666654434 477777899999999999999885554221111
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
......+.+++. .+..++...| +++||.+.++......+.+|+|+. .+.++++++++.|+++++++
T Consensus 294 s~~v~~v~~~~g-----~~~~~v~~~L-~~~gI~i~~~~~~l~~~~vRis~~~~~t~~di~~l~~al~~~~~~~ 361 (361)
T TIGR01366 294 SQVVGTIDFVDD-----IDAATVAKIL-RANGIVDTEPYRKLGRNQLRVAMFPAIDPDDVEALTECVDWVVERL 361 (361)
T ss_pred ccceEEEECCCc-----cCHHHHHHHH-HHCCCeeccCccccCCCcEEEEcCCCCCHHHHHHHHHHHHHHHhhC
Confidence 112223344321 2566776666 677999977643323578999993 68999999999999988763
No 325
>PRK06917 hypothetical protein; Provisional
Probab=99.78 E-value=9.8e-16 Score=146.94 Aligned_cols=358 Identities=15% Similarity=0.104 Sum_probs=212.6
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+...+|+.+|||..|.-... .-.-+|.+.+++.+++....+. +.. .-..+.+..+++.+.+..+ ...+.++++++
T Consensus 25 l~D~dG~~ylD~~~g~~~~~-lGh~hp~v~~Ai~~ql~~~~~~-~~~-~~~~~~~~~lae~L~~~~p--~~~~~v~f~~s 99 (447)
T PRK06917 25 LYDQNGNKYFDGSSGAVTAG-IGHGVKEIADAIKEQAEEVSFV-YRS-QFTSEPAEKLAKKLSDLSP--GDLNWSFFVNS 99 (447)
T ss_pred EEeCCCCEEEECchhHHhcc-CCCCCHHHHHHHHHHHhhCcCc-ccc-ccCCHHHHHHHHHHHHhCC--CCCCEEEEeCC
Confidence 33456899999988843211 1235899999999998764321 111 0112444555555554322 22358999999
Q ss_pred HHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CCE------------EEEEeccCCCC--ccc----
Q 014769 116 CKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QVE------------VRHFDLLPERN--WEV---- 168 (419)
Q Consensus 116 ~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~~------------~~~~~~~~~~~--~~~---- 168 (419)
+++|++.+++.... +| .+|+....+|++....+... +.. +..++.+.... +..
T Consensus 100 GsEAve~AlklAr~~~~~rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 179 (447)
T PRK06917 100 GSEANETAMKIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPT 179 (447)
T ss_pred hHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHH
Confidence 99999999997631 33 67999999999875443322 110 11111110000 000
Q ss_pred ----ChHHHHHhhcC---CccEEEEeCC-CC-cccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 169 ----DLDAVEALADK---NTAAMVIINP-GN-PCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 169 ----~~~~l~~~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+++.++..+.. +..+.+|..| .. -.|. ..|.++++++.++|+++|+++|+||++.++...|..+. ...+
T Consensus 180 ~~~~~~~~le~~i~~~~~~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a-~~~~ 258 (447)
T PRK06917 180 CQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFA-MEHW 258 (447)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhh-HHhc
Confidence 23455555542 2356667777 33 3444 57899999999999999999999999998755554321 1223
Q ss_pred CCCCcEEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
+..+.++ +++|.+ ..|+ ++|.+++++ ++++.+... ...+++.++++..++.+.|+....+
T Consensus 259 gv~PDi~---~~gK~l-~~G~~Pi~a~~~~~--------~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~~-- 324 (447)
T PRK06917 259 GVEPDIM---TLGKGL-GAGYTPIAATVVSD--------RVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEKH-- 324 (447)
T ss_pred CCCCCEE---Eeeehh-ccCCcceEEEEEcH--------HHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHHC--
Confidence 3223333 678995 4575 899999875 566666432 1235567888888888877753222
Q ss_pred HHHHHHHHHHHHHHHHHhhc----CCCCCCCCCCCceEEEEeecCcccc--cCCCC----HHHHHHHHHHhcCeEeecCC
Q 014769 313 CKLIDTLRESAEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWLL--EDIND----DIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~--~~~~~----~~~~~~~ll~~~gv~v~~g~ 382 (419)
...++++++.+++.+.|++ .|.+. ....-|.++.+.+..... +.... ...+...+ .++||++.|+.
T Consensus 325 -~l~~~~~~~g~~l~~~L~~l~~~~~~i~--~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~ 400 (447)
T PRK06917 325 -NLPEKAAEKGEYLIKGLQKVQQQSTIIG--DVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVA-AKNGLLLYPAV 400 (447)
T ss_pred -CHHHHHHHHHHHHHHHHHHHHhcCCCEE--EEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHH-HhCCcEEEecc
Confidence 2334455555555555544 32221 122345666666631100 00001 23444444 56899998752
Q ss_pred C-C-C-CCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 383 Y-V-G-LKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 383 ~-~-~-~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
. . + ..+.+|+++. .++++|+++++++.+++++..+
T Consensus 401 ~~~~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~~~~ 440 (447)
T PRK06917 401 AGQDGKEGDAVIIAPPMTITYSELDELLSIFAKSVEEMMQ 440 (447)
T ss_pred cccCCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 1 1468999974 7999999999999999987643
No 326
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.78 E-value=1.5e-15 Score=141.71 Aligned_cols=305 Identities=17% Similarity=0.167 Sum_probs=199.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH-HHHhhcCCEEEE
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE-GIAQRKQVEVRH 157 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~-~~~~~~g~~~~~ 157 (419)
.|+.+..+.+|++.+++++ ..+.++.+++++.|+++++...+++||.| +..+|.... ......|.. .
T Consensus 73 ~Yagd~s~~~LE~~vAe~l--------G~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~ahI~~~Ga~--f 140 (460)
T PRK13237 73 AYAGSRNFYHLEETVQEYY--------GFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRYHQELNGGI--F 140 (460)
T ss_pred hhcCCCcHHHHHHHHHHHH--------CCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHHHHHhCCcE--E
Confidence 5888888999999999998 33579999999999999877778899965 444444333 325556664 3
Q ss_pred Eecc----------CCCCcccChHHHHHhhcCC----ccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 158 FDLL----------PERNWEVDLDAVEALADKN----TAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 158 ~~~~----------~~~~~~~~~~~l~~~~~~~----~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
+.++ ....+.+|++.++++++++ ++.+.+..++|.. |+..|.++++++.++|+++|+.+|+|.+.
T Consensus 141 vDi~~d~a~~~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAr 220 (460)
T PRK13237 141 VDIIIDEAHDAQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATR 220 (460)
T ss_pred EeeecccccccccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcc
Confidence 3332 1235789999999998753 2356677777777 79999999999999999999999999998
Q ss_pred cccc----------cCCCCCC----CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh--
Q 014769 223 GHLT----------FGSIPYT----PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-- 286 (419)
Q Consensus 223 ~~~~----------~~~~~~~----~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-- 286 (419)
.... |.+.... .+..+. ...+.|++|.++.+- -|+++++++ ++.++++...
T Consensus 221 a~gna~fI~~re~~y~~~~i~ei~~e~~s~a----D~~t~S~~K~~~~~~--GG~i~t~D~-------eL~~~~r~~~~~ 287 (460)
T PRK13237 221 CVENAYFIKEREEGYQDKSIKEIVHEMFSYA----DGCTMSGKKDCLVNI--GGFLAMNDE-------ELFDEAKELVVV 287 (460)
T ss_pred hhcChhhhcccccccCCCcHhHHhhhccCcC----cEEEEeCCCCCCCCC--ceEEEECCH-------HHHHHHHHhccc
Confidence 7431 2221110 011222 255668999965551 388877653 6788887663
Q ss_pred --cc--ccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc---cc
Q 014769 287 --SI--YSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL---LE 358 (419)
Q Consensus 287 --~~--~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~---~~ 358 (419)
.+ +++.+.--..+++..|.+.. .+++..+.. +.++|.+.|.+. |+. +..|.+|.-++++..... .+
T Consensus 288 ~eG~~tygg~~grd~~alAvgl~E~~~~~y~~~ri~----~~~~l~~~L~~~-Gvp-v~~p~ggH~v~vda~~~lph~~~ 361 (460)
T PRK13237 288 YEGMPSYGGMAGRDMEAMAIGIEESVQYEYIEHRVG----QVRYLGEKLLAA-GVP-IVEPVGGHAVFLDARRFLPHLPQ 361 (460)
T ss_pred cCCCcCCCChhhhHHHHHHhHHHhhchHHHHHHHHH----HHHHHHHHHHHC-CCc-eecCCCceEEEEEhHHhCCCCCc
Confidence 11 12222213334444444322 345544444 445666666665 887 447888988887543210 01
Q ss_pred CCCCHHHHHHHHHHhcCeEee-cCCC-CCC-----------CCeEEEEee---cCHHHHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVT-PGIY-VGL-----------KNWLRIAFC---AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~-~g~~-~~~-----------~~~~Ris~~---~~~~~l~~~l~~l~~~~~~ 414 (419)
..-....++.+|..+.||.-. -|+. ++. -..+|+++- .+.+.++...+.|..+.++
T Consensus 362 ~~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 362 DQFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred ccChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 112467888899899999643 2322 111 146999993 4889999999999887754
No 327
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.78 E-value=1.5e-15 Score=135.33 Aligned_cols=354 Identities=13% Similarity=0.097 Sum_probs=229.8
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC------CCCCCCCCCCHHHHHHHH
Q 014769 21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK------FNCYATNSGIPPARRAIA 94 (419)
Q Consensus 21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~------~~~Y~~~~g~~~lr~~ia 94 (419)
....|.+++.+-... .++.|+|=-.. --.++.+.+++-..+.+.. -..|+..+-..++++...
T Consensus 10 ~d~~i~~~i~~e~~r-----q~~~ieLIASE------N~~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~lai 78 (413)
T COG0112 10 YDPEIFEAIQQELER-----QREHIELIASE------NFTSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAI 78 (413)
T ss_pred cCHHHHHHHHHHHHH-----Hhhceeeeecc------ccCCHHHHHHHhhhhhhccccCCCCccccCCCeeHHHHHHHHH
Confidence 345667777654332 23456654443 1357888888877765422 234666666678888888
Q ss_pred HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcC--CEEEEEeccCCCCcccC
Q 014769 95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQ--VEVRHFDLLPERNWEVD 169 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~ 169 (419)
+..++.+|.. -.+|-- .+++.|+..++.++.+|||+|+-.+..+.++.. -....| .+.+.++++++ +..+|
T Consensus 79 erak~LFga~--~anVQP-hSGs~AN~av~~All~pGDtimgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~e-t~~ID 154 (413)
T COG0112 79 ERAKKLFGAE--YANVQP-HSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPE-TGLID 154 (413)
T ss_pred HHHHHHhCCC--ccccCC-CCchHHHHHHHHHHcCCCCeEecccCCCCCcccCCCCCCccceeEEeEecccccc-cCccC
Confidence 8877766633 334444 455778889999999999999988777765421 112222 46667777654 45799
Q ss_pred hHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEE
Q 014769 170 LDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 170 ~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
.|++++...+ +|++++.-.-..| ..++ ++++.++|.+.|.++++|.+|-.. +-+|..+.|+ .+ . -+++
T Consensus 155 yD~~~k~a~e~kPK~ii~G~SaY~--r~id---~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~-~~-A---dvVT 224 (413)
T COG0112 155 YDEVEKLAKEVKPKLIIAGGSAYS--RPID---FKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPL-PH-A---DVVT 224 (413)
T ss_pred HHHHHHHHHHhCCCEEEECccccc--cccC---HHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCC-Cc-c---ceEe
Confidence 9999987765 5555554322222 3345 899999999999999999999654 3344333333 22 2 2889
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI 325 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (419)
+|++|+ ++|.|-|.+.++++ ++.+++..... .-+++......+.+-++.+-....+++..+++.++.+.
T Consensus 225 tTTHKT--lrGPrGG~Il~~~e-------el~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAka 295 (413)
T COG0112 225 TTTHKT--LRGPRGGIILTNDE-------ELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKA 295 (413)
T ss_pred CCcccC--CCCCCceEEEeccH-------HHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHH
Confidence 999998 68999999998752 68888887532 22333333333334444443345677888889999999
Q ss_pred HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC-CC-----CCCeEEEEe-----
Q 014769 326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY-VG-----LKNWLRIAF----- 394 (419)
Q Consensus 326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-~~-----~~~~~Ris~----- 394 (419)
|.+.|.+. |+.++..-.....+.+++.... . .-..++.+|.+.||.+.--.- |. .+..|||..
T Consensus 296 LAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~---~--~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~Tt 369 (413)
T COG0112 296 LAEALKER-GFKVVSGGTDNHLVLVDLRSKG---L--TGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTT 369 (413)
T ss_pred HHHHHHHc-CCeEecCCccceEEEEEcccCC---C--CHHHHHHHHHHcCEeeccCCCCCCCCCCCCCccceeccHHHhh
Confidence 99999987 8875543344556667776321 1 234456777889998853222 22 257899998
Q ss_pred -ecCHHHHHHHHHHHHHHHHH
Q 014769 395 -CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 395 -~~~~~~l~~~l~~l~~~~~~ 414 (419)
+..++++++..+.|.+++..
T Consensus 370 rG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 370 RGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred cCCCHHHHHHHHHHHHHHHhc
Confidence 23578888888888888764
No 328
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.78 E-value=2.2e-16 Score=145.95 Aligned_cols=354 Identities=16% Similarity=0.091 Sum_probs=218.6
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCCCCCCHHHHHHHHHHHHhhCCCC-CCCCcEE
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRAIADYLSRDLPYK-LSADDVY 111 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~~~-~~~~~i~ 111 (419)
+...+|+.++|=..|.=+.. .-.-++++.+++.++++.-.+. .....+ ..+|-+.+++.. + -+-++|+
T Consensus 38 l~d~~G~r~lDg~sg~W~~~-~Gh~~~~i~~Ai~~Q~~~l~~~~~~~~t~~P-a~~LA~~L~~~a------P~~~l~~vF 109 (449)
T COG0161 38 LTDIDGRRYLDGMSGLWCVN-HGHGRPEIAEAIKKQLDKLPHVMFGGFTHEP-AIELAEKLAELA------PEGGLDHVF 109 (449)
T ss_pred EEeCCCCEEEecccHHHHhh-cCcCCHHHHHHHHHHHHhCCchhhcccCCch-HHHHHHHHHHhC------CCCCccEEE
Confidence 33456888888766632211 1235789999999998764321 112222 456666677665 3 2368999
Q ss_pred EcccHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCC------
Q 014769 112 VTLGCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE------ 163 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~------ 163 (419)
+++|++++++.+++.... |. .+++.-..+|++-.-.+...|. .+..++.+..
T Consensus 110 f~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~ 189 (449)
T COG0161 110 FTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFF 189 (449)
T ss_pred EeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchheeccCchhhhhhhccccccCceecCCCcccccCCC
Confidence 999999999999987642 32 3488888999864322222221 1112222110
Q ss_pred CCcc----cChHHHHHhhcC---CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769 164 RNWE----VDLDAVEALADK---NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 164 ~~~~----~~~~~l~~~~~~---~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 233 (419)
..+. -..++|++.+.. .+.+.+|..| +.-+|+ ++|+.+|+++.++|++||+++|.||+-.+|...|+.+.
T Consensus 190 ~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA 269 (449)
T COG0161 190 GEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFA 269 (449)
T ss_pred CCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhh
Confidence 1111 124556666644 5677788888 333676 57899999999999999999999999999988876543
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHccc
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKT 307 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~ 307 (419)
. ..++..+.++ +++|.+...-+++|.+++++ ++.+.+..- ..++++.++++.+++.+.|+-.
T Consensus 270 ~-e~~gi~PDi~---~~aKGLT~GY~Pl~a~l~~~--------~I~~~~~~~~~~~f~HG~TYsghPlacAaAla~L~i~ 337 (449)
T COG0161 270 C-EHAGIVPDIL---CLAKGLTGGYLPLSAVLTSD--------RIYEAFSDGDAGAFMHGHTYSGNPLACAAALANLDIL 337 (449)
T ss_pred h-hhcCCCCCee---eecccccccchhhHhHhhhH--------HHHHHHhcccCCeeccCCccccCHHHHHHHHHHHHHH
Confidence 2 3333333344 57898665558888888765 566766653 1346778888888887777653
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCC-CCCceEEEEeecCcccccCC---CCHHHHHHHHHHhcCeEeecCC
Q 014769 308 KEDFFCKLIDTLRESAEICYDGVKE-IPCISCPN-KPEGSMVTMVKLNPWLLEDI---NDDIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~-~p~~g~~~~~~~~~~~~~~~---~~~~~~~~~ll~~~gv~v~~g~ 382 (419)
.++. ..++.++...++.+.|++ +++...|. ...-|++.-+.+....-... ......+...+.++|++++|..
T Consensus 338 e~e~---l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iRp~g 414 (449)
T COG0161 338 EEED---LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIRPLG 414 (449)
T ss_pred HhcC---HHHHHHHHHHHHHHHHHHhcccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCCeEEeecC
Confidence 3222 233344444455555544 32211121 23446666666643211000 0113344455567899999972
Q ss_pred CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+.+=+++ ..++++|+++++.+.+++++..+
T Consensus 415 -----~~i~~~PPliit~~eid~l~~~l~~al~~~~~ 446 (449)
T COG0161 415 -----DVIYLMPPLIITREEIDELVDALREALDETLA 446 (449)
T ss_pred -----CEEEEcCCccCCHHHHHHHHHHHHHHHHHHHh
Confidence 3555555 57999999999999999987654
No 329
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.77 E-value=3.8e-16 Score=149.19 Aligned_cols=344 Identities=13% Similarity=0.076 Sum_probs=206.6
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.++||..|..+..- -.-+|.+.+++.+++........... ..+....+++.+.+..+ -.-+.++++++++
T Consensus 41 d~dG~~ylD~~~g~~~~~l-Gh~~p~v~~ai~~~~~~~~~~~~~~~--~~~~~~~la~~l~~~~~--~~~~~v~f~~sGs 115 (427)
T TIGR00508 41 LDDGRRLIDGMSSWWAAIH-GYNHPRLNAAAQKQIDKMSHVMFGGF--THKPAIELCQKLVKMTP--NALDCVFLADSGS 115 (427)
T ss_pred eCCCCEEEEccchHHHhcC-CCCCHHHHHHHHHHHHhcCCcccccc--CCHHHHHHHHHHHhhCC--CCCCEEEEeCCcH
Confidence 3458999999888433221 24678999999998875331111000 11223334444433222 2236899999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhc-CCE-------------EEEEeccCCCCcc-----cCh
Q 014769 118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRK-QVE-------------VRHFDLLPERNWE-----VDL 170 (419)
Q Consensus 118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~-g~~-------------~~~~~~~~~~~~~-----~~~ 170 (419)
++++.+++.... +| .+|+....+|++....+... +.. ...++. +...+. -++
T Consensus 116 eA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~ 194 (427)
T TIGR00508 116 VAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPA-PQNRFDEEWNEEAI 194 (427)
T ss_pred HHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCcccccccccccCCCCeEcCC-CCccccchhHHHHH
Confidence 999999887542 23 67999999999864333222 110 001111 000010 134
Q ss_pred HHHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 171 DAVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 171 ~~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
+++++.+.. +..+.+++.| ++-.|. ..+.+++++|.++|+++|+++|+||++.++...|..+.. ..++..+. +
T Consensus 195 ~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DEv~tG~Gr~G~~~~~-~~~~v~pD-i 272 (427)
T TIGR00508 195 TPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIATGFGRTGKLFAC-EHAGVVPD-I 272 (427)
T ss_pred HHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCccchh-hhcCCCCC-E
Confidence 566666542 3345667776 454555 568999999999999999999999999776555543221 12222222 3
Q ss_pred EEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769 246 TLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318 (419)
Q Consensus 246 ~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 318 (419)
+ +++|.+ ..| +.++.++.++ ++.+.++.. ...++..++++..++.++|+....+ +..++
T Consensus 273 ~--~~gK~l-~gG~~p~~a~~~~~--------~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~a~l~~l~~~---~~~~~ 338 (427)
T TIGR00508 273 L--CVGKAL-TGGYMTLSATVTTD--------KVAQTISSGEAGCFMHGPTFMGNPLACAVAEASLAILLEG---EWQKQ 338 (427)
T ss_pred E--Eechhh-hcCcccceEEEEcH--------HHHHHHhcCCCCccccCCCCCcCHHHHHHHHHHHHHHHhC---CHHHH
Confidence 3 479996 567 4788888765 577777642 1223455777777777777642211 23456
Q ss_pred HHHHHHHHHHHhhcCCCCCCCC-CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--
Q 014769 319 LRESAEICYDGVKEIPCISCPN-KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-- 395 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-- 395 (419)
++++.+++.+.|+++.....+. ...-|.+..+.+... .....+..++ .++||.+.+.. ..+|+++.
T Consensus 339 ~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gv~~~~~~-----~~l~~~ppl~ 407 (427)
T TIGR00508 339 VSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMYKP-----VNVEELQKKF-VEQGVWIRPFG-----KLIYVMPPYI 407 (427)
T ss_pred HHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEECCc-----cCHHHHHHHH-HHCCeEEEecC-----CEEEEECCCC
Confidence 6666777777776642111010 112255555666421 1345666665 56799997642 47899884
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~ 414 (419)
.++++|+++++.+++++.+
T Consensus 408 ~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 408 ITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 7899999999999999864
No 330
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.77 E-value=1.9e-15 Score=145.33 Aligned_cols=354 Identities=14% Similarity=0.077 Sum_probs=208.2
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEc-cc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVT-LG 115 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t-~g 115 (419)
..+|+.++||..|.-... .-.-+|.+.+++.+++..... +....-..+.+..+++.+....+.... .+.++++ ++
T Consensus 59 D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~ql~~~~~--~~~~~~~~~~~~~la~~L~~~~p~~~~~~~~v~f~~~S 135 (464)
T PRK06938 59 DVEGRQFIDCLAGAGTLA-LGHNHPVVIEAIQQVLADELP--LHTLDLTTPVKDQFVQDLFASLPEAFAREAKIQFCGPT 135 (464)
T ss_pred eCCCCEEEEccCCccccc-cCCCCHHHHHHHHHHHHhhhc--ccccccCCHHHHHHHHHHHHhCcccccccceEEEeCCC
Confidence 345889999988853321 123578999999999864321 111011124444555555432221111 1357665 79
Q ss_pred HHHHHHHHHHHhcC-CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCC--c--------ccCh
Q 014769 116 CKQAVEVILSVLAR-PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERN--W--------EVDL 170 (419)
Q Consensus 116 ~~~al~~~~~~l~~-~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~--~--------~~~~ 170 (419)
+++|++.+++.... +| .+|+....+|++....+..... ++..++...... + ..++
T Consensus 136 GSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 215 (464)
T PRK06938 136 GTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL 215 (464)
T ss_pred cHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHH
Confidence 99999999987643 33 6788889999886543332210 112222211000 0 0125
Q ss_pred HHHHHhhcC-----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769 171 DAVEALADK-----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243 (419)
Q Consensus 171 ~~l~~~~~~-----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 243 (419)
+.+++.+.. ...+.+|..| +.-.|. ..|.++++++.++|+++|+++|.||++.+|...|..+ ....++..+.
T Consensus 216 ~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~-a~e~~gv~PD 294 (464)
T PRK06938 216 HYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDEIQSGFGRTGKMF-AFEHAGIIPD 294 (464)
T ss_pred HHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcHHH-HHHhcCCCCC
Confidence 666776653 1345667777 444465 4679999999999999999999999999886555422 2223333333
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (419)
++ +++|.+ ..|+++|.+++++ + ++.+... ...+++.++++..++.+.|+...++.+. ++.++.
T Consensus 295 iv---~~gKgl-ggG~PlsAv~~~~--------~-~~~~~~~~~~~T~~gnpla~Aaa~a~L~~l~~~~l~---~~~~~~ 358 (464)
T PRK06938 295 VV---VLSKAI-GGSLPLAVVVYRE--------W-LDTWQPGAHAGTFRGNQMAMAAGSATLRYIKEHRLA---EHAAAM 358 (464)
T ss_pred EE---Eeeccc-cCCCceEEEeehh--------H-hhccCCCCCCCCCCcCHHHHHHHHHHHHHHHHhHHH---HHHHHH
Confidence 44 468996 4689999999865 2 2333222 2335677888888888888754333222 333333
Q ss_pred HHHHHHHhhc----CCCCCCCCCCCceEEEEeecCccc-ccC----CC-C---HHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769 323 AEICYDGVKE----IPCISCPNKPEGSMVTMVKLNPWL-LED----IN-D---DIEFALKLAKEESVIVTPGIYVGLKNW 389 (419)
Q Consensus 323 ~~~l~~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~-~~~----~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~ 389 (419)
.+++.+.|++ +|.+. ....-|+++.+.+.... ... .. + ...+...+ .++||++.++..+ .+.
T Consensus 359 G~~l~~~L~~l~~~~~~i~--~VrG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~g~~--~~~ 433 (464)
T PRK06938 359 GERLREHLRQLQRDYPQLG--DVRGRGLMLGVEIVDPQGEPDALGHPPANGELASLIQREC-LRRGLILELGGRH--GSV 433 (464)
T ss_pred HHHHHHHHHHHHHhCCCee--eeeccceEEEEEeccCcccccccccCCccHHHHHHHHHHH-HHCCeEEeecCCC--CCE
Confidence 4444444433 43222 12344666667663210 000 00 1 12344455 5689999875322 367
Q ss_pred EEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 390 LRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 390 ~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+|+.+ ..++++++++++++.+++.+..
T Consensus 434 l~~~Ppl~it~~eid~~~~~l~~~l~~~~ 462 (464)
T PRK06938 434 VRFLPPLIITAEQIDEVAEIFAEAVAAAV 462 (464)
T ss_pred EEEECCCccCHHHHHHHHHHHHHHHHHHh
Confidence 99986 5799999999999999998753
No 331
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.77 E-value=1.1e-15 Score=128.73 Aligned_cols=323 Identities=13% Similarity=0.151 Sum_probs=204.9
Q ss_pred ChHHHHHHHHHHHhCCCCCCCC--------CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYA--------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG 131 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~--------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g 131 (419)
++++.++++.+--+.-+.-.|. ..+-+..+.+.+++|+ .-|.+-+|+|+.++=++++.+++++|
T Consensus 29 Lt~eArkal~E~gDGYSvCD~C~~Grldei~kPpI~~F~~dlaeFl--------g~D~~R~t~GARe~KfavMhal~~~g 100 (382)
T COG1103 29 LTEEARKALLEWGDGYSVCDFCLEGRLDEITKPPIKDFLEDLAEFL--------GMDEVRVTAGAREAKFAVMHALCKEG 100 (382)
T ss_pred CCHHHHHHHHHhcCCcchhhhhccCccccccCCcHHHHHHHHHHHh--------CCceeeecccchhhHHHHHHHhccCC
Confidence 5677777777653221111111 1123467778899998 45789999999999999999999999
Q ss_pred CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-------CccEEEEeCCCCccccCCCHHHHHH
Q 014769 132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-------NTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
|.|++...+|+...-+++..|+++..+|-.....+.+++|...+.+.+ .+.+.++++|...-|.+.+ -++
T Consensus 101 d~vV~D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~D---akk 177 (382)
T COG1103 101 DWVVVDSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLAD---AKK 177 (382)
T ss_pred CEEEEcCcchHHHHHHHHhcCCeEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchh---hHH
Confidence 999999999988888899999999999865455678888877665532 2456688899877888776 899
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD 284 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~ 284 (419)
++++|+++++.++...+|.. |.-+.+....+.+ ++++|-+|+ ..+.-++|.+..+. +..+..-.
T Consensus 178 va~ic~e~gvPlllN~AYt~----Grmpvs~ke~g~D---FiVgSGHKs-mAAs~PiGvl~~~e--------E~ae~V~r 241 (382)
T COG1103 178 VAKICREYGVPLLLNCAYTV----GRMPVSGKEIGAD---FIVGSGHKS-MAASAPIGVLAMSE--------EWAEIVLR 241 (382)
T ss_pred HHHHHHHcCCceEeecceee----ccccccccccCCC---EEEecCccc-hhccCCeeEEeehh--------HHHHHHHh
Confidence 99999999999999999987 4445555555555 889999999 46777899998875 23332211
Q ss_pred hh-------cc-ccCCchHHHHHHHHHHcc-cc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecC
Q 014769 285 CL-------SI-YSDIPTFIQGAIPQILEK-TK-EDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLN 353 (419)
Q Consensus 285 ~~-------~~-~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~ 353 (419)
.. .. ..+.+.-.. -+..++.+ .. .+.+.+.-+.+ +..+.+.+.|+++.|+... ..|..--.+.+..|
T Consensus 242 ~Sg~~~~~KEvellGCT~rGa-pivTlmASfP~V~eRVkrWdeEv-~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp 319 (382)
T COG1103 242 RSGRAFPKKEVELLGCTVRGA-PIVTLMASFPHVVERVKRWDEEV-EKARWFVAELEKIGGVKQLGERPKNHDLMKFETP 319 (382)
T ss_pred hcccccccceeeeecccccCc-hHHHHHhcCHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHHhCCCCcccceeeecCc
Confidence 11 00 011111111 11112221 00 01111212222 3344556666666444321 12333223333333
Q ss_pred ccc---ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHH
Q 014769 354 PWL---LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 354 ~~~---~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~ 415 (419)
... .+......-+.+.| +++||. |...+...++.+|+ +.+.|+++..++.++++++++
T Consensus 320 ~f~eIakk~~r~gyFlY~EL-K~RgI~---GI~~G~Tk~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 320 VFHEIAKKHKRKGYFLYEEL-KKRGIH---GIQPGQTKYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred hHHHHHHhCcCCceeeHHHH-HhcCcc---ccccCceeEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 210 00001112234444 777875 33334578999998 899999999999999999876
No 332
>PRK04311 selenocysteine synthase; Provisional
Probab=99.77 E-value=3.3e-15 Score=142.53 Aligned_cols=320 Identities=17% Similarity=0.128 Sum_probs=193.2
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCC---CC--CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATN---SG--IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~---~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd 132 (419)
.+.++.+.+++.+.+.......|.-. .| +..+++.+++++ +.+..++++++++|+..++.++ .+||
T Consensus 96 s~l~~~v~eav~~~~~~~~~le~~l~~g~~g~r~~~~e~~lA~l~--------Gae~a~vv~sgtaAl~l~l~~l-~~Gd 166 (464)
T PRK04311 96 ALLSEAAIEAVTEAARGYSNLEYDLATGKRGSRDRALAALLCALT--------GAEDALVVNNNAAAVLLALNAL-AAGK 166 (464)
T ss_pred CCCCHHHHHHHHHHHhcccccccchhhcccchHHHHHHHHHHHHh--------CCCeEEEECCHHHHHHHHHHHh-CCCC
Confidence 45778999999888765321122211 11 257888888887 2346788888999999988765 6899
Q ss_pred eEEeeCCCCCC------cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc--c--cCCCHHHH
Q 014769 133 NVLLPRPGWPY------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC--G--NVFTYHHL 202 (419)
Q Consensus 133 ~vlv~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G--~~~~~~~l 202 (419)
+|++....+.. +...+...|++++.++... ..++++++++++++++++++++++||+ | ...+ +
T Consensus 167 eVIvs~~e~~~~ggs~~i~~~~~~~G~~l~~v~~~~----~t~~~dle~aI~~~TklV~~vh~sN~~i~G~~~~~d---l 239 (464)
T PRK04311 167 EVIVSRGELVEIGGAFRIPDVMRQAGARLVEVGTTN----RTHLRDYEQAINENTALLLKVHTSNYRIEGFTKEVS---L 239 (464)
T ss_pred EEEEcchhhhhcCcchhhHHHHHHCCcEEEEECCCC----CCCHHHHHHhcCccCeEEEEEcCCCccccccCCcCC---H
Confidence 99999865542 2345677899988876421 357889999999899999999999983 4 4566 9
Q ss_pred HHHHHHHHhCCCeEEEcccccccc----cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLT----FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
++|+++|+++|+++++|...+.+. ++-...+.+......+-.++++|.+|.++.| ..|++++++ ++
T Consensus 240 ~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~l 309 (464)
T PRK04311 240 AELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------EL 309 (464)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcEEEecCcccccCC--ceEEEEEcH--------HH
Confidence 999999999999999999654331 1100111222211122348889999986555 489998865 56
Q ss_pred HHHHHhhh-ccccCCchHHHHHHHHHHc----ccc-h------HHHHHHHHHHHHHHHHHHHHhhcCC--CC--CCC---
Q 014769 279 IDSIKDCL-SIYSDIPTFIQGAIPQILE----KTK-E------DFFCKLIDTLRESAEICYDGVKEIP--CI--SCP--- 339 (419)
Q Consensus 279 ~~~l~~~~-~~~~~~~~~~~~a~~~~l~----~~~-~------~~~~~~~~~~~~~~~~l~~~l~~~~--~~--~~~--- 339 (419)
++.++... .......-....++.+.+. ... . .-+....+++.++.+.+.+.|+..+ ++ .++
T Consensus 310 i~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~ 389 (464)
T PRK04311 310 IARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSF 389 (464)
T ss_pred HHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEcc
Confidence 66666321 0011112222222222222 100 0 1122233666677888888887643 22 111
Q ss_pred CCCCc---------eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHH
Q 014769 340 NKPEG---------SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMK 409 (419)
Q Consensus 340 ~~p~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~ 409 (419)
....| ++-+.++.+ + .+..++...| ++....|..- -.++.+.+.+ +..+++++..+++|.
T Consensus 390 ~~~gggs~p~~~~~~~~v~~~~~-----~-~~~~~l~~~l-r~~~~~i~~r---~~~~~~~ld~r~~~~~~~~~~~~~~~ 459 (464)
T PRK04311 390 SQVGGGSLPVDRLPSAAVTLTPK-----D-RSLEALAARL-RLLPPPVIGR---IEDGRLLLDLRTLEEEDEERLAAALL 459 (464)
T ss_pred CccCCCCCcCCCCCeEEEEEeCC-----C-CCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHHH
Confidence 01111 222222211 1 1345555444 6644333221 1257788888 568899999999998
Q ss_pred HHHH
Q 014769 410 AFCQ 413 (419)
Q Consensus 410 ~~~~ 413 (419)
+++.
T Consensus 460 ~~~~ 463 (464)
T PRK04311 460 EALN 463 (464)
T ss_pred HHhh
Confidence 8764
No 333
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.77 E-value=1e-16 Score=147.99 Aligned_cols=355 Identities=14% Similarity=0.103 Sum_probs=201.2
Q ss_pred hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHH
Q 014769 23 VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADY 96 (419)
Q Consensus 23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~ 96 (419)
..|.+++++-..+ ....|+|--.. -..+|.+++++...+.+....+ |+...-+.++++...+.
T Consensus 6 ~ei~~li~~e~~r-----q~~~l~LiaSE------N~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~r 74 (399)
T PF00464_consen 6 PEIYELIEKEEER-----QRSTLNLIASE------NYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIER 74 (399)
T ss_dssp HHHHHHHHHHHHH-----HHHSEE-CTT-----------HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HhcCccccCcc------cccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHH
Confidence 3455555543332 33456665543 2356777777766554432222 33333345666666666
Q ss_pred HHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHH-------hhcCCEEEEEeccCCCC
Q 014769 97 LSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIA-------QRKQVEVRHFDLLPERN 165 (419)
Q Consensus 97 l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~-------~~~g~~~~~~~~~~~~~ 165 (419)
.++.++...+.-.+ +=..+++.|+..++.+|++|||+|+..++.+.++. ... .....+...++++++ +
T Consensus 75 a~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~-~ 153 (399)
T PF00464_consen 75 AKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPD-T 153 (399)
T ss_dssp HHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TT-T
T ss_pred HHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecC-C
Confidence 66655533221133 33577788999999999999999999987775542 111 223467888888765 4
Q ss_pred cccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCc
Q 014769 166 WEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVP 243 (419)
Q Consensus 166 ~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~ 243 (419)
..+|.|++++.+.. +|++|++-.-..| ..++ ++++.++|++.|.++++|.+|... +-+|..+.|+ .. .+
T Consensus 154 ~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d---~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~-~~-AD-- 224 (399)
T PF00464_consen 154 GLIDYDELEKLAKEHKPKLIICGASSYP--RPID---FKRFREIADEVGAYLMADISHIAGLIAGGLFPNPF-PY-AD-- 224 (399)
T ss_dssp SSB-HHHHHHHHHHH--SEEEEE-SSTS--S------HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GC-CT-SS--
T ss_pred CeECHHHHHHHHhhcCCCEEEECchhcc--CccC---HHHHHHHHHhcCcEEEecccccccceehheecCcc-cc-ce--
Confidence 68999999988765 5666665433332 2233 789999999999999999999754 3344333344 23 22
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCC------CCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHH
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDP------NGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKL 315 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~------~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~ 315 (419)
++.+|++|+ ++|.|.|.++++.. .....++++.+++...... .+++......+.+..+.+.....+++.
T Consensus 225 -vvt~sThKt--l~GPrggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Y 301 (399)
T PF00464_consen 225 -VVTGSTHKT--LRGPRGGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEY 301 (399)
T ss_dssp -EEEEESSGG--G-SSS-EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHH
T ss_pred -EEEeecccc--ccccCceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHH
Confidence 888899998 68999999999710 0000023688888876422 233333334444445554334556788
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCCeE
Q 014769 316 IDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKNWL 390 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~~~ 390 (419)
.+++.++.+.|.+.|.+. |+.++........+|+++..... + ...+++.|++.||.+..-..++ ....+
T Consensus 302 a~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~----~-g~~a~~~Le~~gI~vnkn~iP~d~~~~~~sGl 375 (399)
T PF00464_consen 302 AKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGI----D-GKEAEKALEEAGIIVNKNTIPGDRSPFVPSGL 375 (399)
T ss_dssp HHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS------HHHHHHHHHHTTEE-EEE--TTTSTTTT-SEE
T ss_pred HHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccccc----c-hHHHHHHHHhcCeeecccccCCCCCCCCCCEE
Confidence 889999999999999987 88755444556778888864321 3 3345667799999986432221 24689
Q ss_pred EEEee------cCHHHHHHHHHH
Q 014769 391 RIAFC------AEPSALKDGLGR 407 (419)
Q Consensus 391 Ris~~------~~~~~l~~~l~~ 407 (419)
||+.. ..++++++..+.
T Consensus 376 RlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 376 RLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp EEESHHHHHTT--HHHHHHHHHH
T ss_pred EECCHHHHhCCCCHHHHHHHHhh
Confidence 99982 356777766554
No 334
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.77 E-value=5.3e-16 Score=136.62 Aligned_cols=293 Identities=18% Similarity=0.165 Sum_probs=192.8
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc----HHHHhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY----EGIAQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~----~~~~~~~g~~~~~~~ 159 (419)
+....|++.|+..= .| -.-+-++++++|+..++..++++||.|+..+--|.+. ...++..|++++++.
T Consensus 62 PT~~vlE~RiAaLE---GG-----~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd 133 (426)
T COG2873 62 PTTDVLEERIAALE---GG-----VAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVD 133 (426)
T ss_pred chHHHHHHHHHHhh---cc-----hhhhhhccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeC
Confidence 35678999999864 11 2346678889999999999999999999998878764 455688899999875
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
. .|++.+++++++++|+|++.+-.||.+.+++ +++|.++|+++++++|+|..+..-. -..|+ ..+
T Consensus 134 ~-------~d~~~~~~aI~~nTkavf~EtigNP~~~v~D---ie~ia~iAh~~gvpliVDNT~atpy----l~rP~-~hG 198 (426)
T COG2873 134 P-------DDPENFEAAIDENTKAVFAETIGNPGLDVLD---IEAIAEIAHRHGVPLIVDNTFATPY----LCRPI-EHG 198 (426)
T ss_pred C-------CCHHHHHHHhCcccceEEEEeccCCCccccC---HHHHHHHHHHcCCcEEEecCCCcce----ecchh-hcC
Confidence 3 3789999999999999999999999999999 9999999999999999999887521 11122 223
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc----hh---------------------hHHHHHHh--hhccccCC
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ----KS---------------------GIIDSIKD--CLSIYSDI 292 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~---------------------~~~~~l~~--~~~~~~~~ 292 (419)
. .|++.|++|..+..|.-+|-+++..-...+. .| .++-+.+. .+.+..+.
T Consensus 199 A---DIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~l 275 (426)
T COG2873 199 A---DIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDPSYHGLVYTETFGNAAFIIKARVQLLRDLGATL 275 (426)
T ss_pred C---CEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCccccceehhhhcccHHHHHHHHHHHHHhccccc
Confidence 3 3899999999999999998888754221111 00 01111111 11222233
Q ss_pred chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-----------------ceEEEEeecCcc
Q 014769 293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE-----------------GSMVTMVKLNPW 355 (419)
Q Consensus 293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-----------------~g~~~~~~~~~~ 355 (419)
++.....+..-+ +-+.-+.++..++...+.+.|+.+|.+..|..|. .|-.+.+.+...
T Consensus 276 sPfnAfl~lqGl-----ETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg 350 (426)
T COG2873 276 SPFNAFLLLQGL-----ETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG 350 (426)
T ss_pred CcHHHHHHHhch-----hhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCCCCcchhHHHhhccCCCceEEEEEecCh
Confidence 333333322222 2244556777788889999999887665444332 233455555432
Q ss_pred cccCCCCHHHHHHHHHHh----------cCeEeecCCCCCC-------------CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKE----------ESVIVTPGIYVGL-------------KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~----------~gv~v~~g~~~~~-------------~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
. .....|++.| +- +-+.+.|.+.-.. ++.+|+|++. |+++..+..|++++
T Consensus 351 ~----ea~~~fi~~l-~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~IRlSVGI--Ed~~DiiaDl~qAl 423 (426)
T COG2873 351 Y----EAGKKFIDAL-KLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLIRLSVGI--EDIDDIIADLEQAL 423 (426)
T ss_pred H----HHHHHHHHHH-HHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcEEEEecc--CCHHHHHHHHHHHH
Confidence 1 1123444443 21 2334445443221 5789999997 46677777777776
Q ss_pred HH
Q 014769 413 QR 414 (419)
Q Consensus 413 ~~ 414 (419)
++
T Consensus 424 ~~ 425 (426)
T COG2873 424 EA 425 (426)
T ss_pred hc
Confidence 53
No 335
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.76 E-value=1.7e-15 Score=129.94 Aligned_cols=323 Identities=15% Similarity=0.117 Sum_probs=218.2
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCC
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p 139 (419)
.++.+.+++.. +.. +|..++ ...+.+.+.+-++..+. ..++.-.++..+++.+++.++..++.|||.|++..-
T Consensus 28 l~~~V~~A~~~----~~l-gh~sPe-~~qIm~~v~egikyVFk-T~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~ 100 (385)
T KOG2862|consen 28 LSGRVQEAMSR----PSL-GHMSPE-FVQIMDEVLEGIKYVFK-TANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVST 100 (385)
T ss_pred CCHHHHHhhcC----Ccc-ccCCHH-HHHHHHHHHHHHHHHhc-cCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEe
Confidence 45666666543 323 444422 23333333333322222 234456788888999999999999999999998865
Q ss_pred CCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeE
Q 014769 140 GWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMV 216 (419)
Q Consensus 140 ~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 216 (419)
+-.+ ..+.++.+|+++..++.+ .+...+++.+...+.+ +++++++++....||+..+. +..+.++|++|+.++
T Consensus 101 G~wg~ra~D~~~r~ga~V~~v~~~--~G~~~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~--~~~~g~lc~k~~~ll 176 (385)
T KOG2862|consen 101 GTWGQRAADCARRYGAEVDVVEAD--IGQAVPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDL--LAISGELCHKHEALL 176 (385)
T ss_pred chHHHHHHHHHHhhCceeeEEecC--cccCccHHHHHHHHHhcCCceEEEEecCccccccchH--HHHHHHHhhcCCeEE
Confidence 5443 457889999999998764 3557899999988876 57888999999999998772 345667899999999
Q ss_pred EEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh----------
Q 014769 217 VADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---------- 286 (419)
Q Consensus 217 i~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---------- 286 (419)
++|.+-+- ++.++ .+..++.+ +......|+++.| ..++.+..++ .-.+++++..
T Consensus 177 lVD~VaSl---ggt~F-~mDewgVD---vaytgSQKaL~aP-~GLsiisfS~--------ka~~~~~~rK~~~~~~yFd~ 240 (385)
T KOG2862|consen 177 LVDTVASL---GGTEF-EMDEWGVD---VAYTGSQKALGAP-AGLSIISFSD--------KALEAIRDRKTKPVSFYFDI 240 (385)
T ss_pred EEechhhc---CCccc-eehhhccc---EEEecchhhcCCC-CCcceeecCH--------HHHHHHhhccCCceEEEEeH
Confidence 99999885 23332 23334333 5555667997664 2244454433 1223333211
Q ss_pred --------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CC--CceEEEE
Q 014769 287 --------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN-KP--EGSMVTM 349 (419)
Q Consensus 287 --------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p--~~g~~~~ 349 (419)
.+..+++....+.+.++|....++.+++..++.++..+.++..|+++ |++... .+ .......
T Consensus 241 ~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~~l~~~l~~~-GLq~fv~~e~~rlptvtt 319 (385)
T KOG2862|consen 241 LRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSKWLKLSLEAL-GLQLFVVDEELRLPTVTT 319 (385)
T ss_pred HhhcchhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CccceecChhhccCccee
Confidence 12235566667788888887778899999999999999999999987 554211 11 1112233
Q ss_pred eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHH
Q 014769 350 VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..|.. .|..+++.++...+++.+.-|........+||.+ + .+.|.++..++.|+.++.+.
T Consensus 320 v~vp~g-----vDw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcna~~e~i~~v~~ll~~alq~~ 383 (385)
T KOG2862|consen 320 VKVPYG-----VDWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCNANVEYIDNVVELLKLALQRK 383 (385)
T ss_pred eecCCC-----CCHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeeccCCcHHHHHHHHHHHHHHhhc
Confidence 444532 3678888888887788887666666688999998 4 36799999999999888753
No 336
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.76 E-value=6.4e-16 Score=136.76 Aligned_cols=349 Identities=15% Similarity=0.074 Sum_probs=219.0
Q ss_pred HhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEE
Q 014769 34 DSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVY 111 (419)
Q Consensus 34 ~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~ 111 (419)
+-+....|+.+.|+-.|..+.- .-.-+|.+.+++.+++..- ....|..++ ..++.+++++.+ +-+-..++
T Consensus 42 ~ylyDe~G~ryLD~f~Gi~tvs-lGHchP~v~~a~~kQl~~l~H~t~~~~~~p-i~~~Ae~L~s~~------P~~l~~vf 113 (442)
T KOG1404|consen 42 QYLYDEEGRRYLDAFGGIVTVS-LGHCHPDVVAAAVKQLKKLYHTTSGYLNPP-IHDLAEALVSKL------PGDLKVVF 113 (442)
T ss_pred EEEEcCCCceeehhhCCeEEEE-cCCCChHHHHHHHHhhhhhEEeeccccCCc-HHHHHHHHHHhC------CCCceEEE
Confidence 3344556889999998854432 2246899999999988542 344666543 467888888877 44556799
Q ss_pred EcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CCEEEEEecc-----------CC--C-CcccC-----
Q 014769 112 VTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QVEVRHFDLL-----------PE--R-NWEVD----- 169 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~~~~-----------~~--~-~~~~~----- 169 (419)
++++++||++++++.... .--.|+....+|++.......+ +......+.+ |+ . -|+=+
T Consensus 114 F~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp~r~~~~~~~~~e~ 193 (442)
T KOG1404|consen 114 FVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDPYRGIFGGSNEEEA 193 (442)
T ss_pred EecCCchHHHHHHHHHHHhcCCceEEEeeccccCCchhhcccccCCcccccCCCCCCcccccCCCCcccccCCCCchhhh
Confidence 999999999999887643 2246777788887754433322 2222111110 00 0 00000
Q ss_pred ----hHHHHHhh---cCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 170 ----LDAVEALA---DKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 170 ----~~~l~~~~---~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.+++++.+ .+.+.+.++..+ +.-.|+ .+++.++++..++|+++|.++|.||++++|...| ....+...+.
T Consensus 194 ~d~~a~~l~d~i~~~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG-~~wgfe~h~v 272 (442)
T KOG1404|consen 194 SDRYAKELEDLILYDGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTG-HMWGFESHGV 272 (442)
T ss_pred HHHHHHHHHHHHHhcCCCceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhcccccc-ccccccccCC
Confidence 12233333 234556667666 454565 4789999999999999999999999999988777 4444444333
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-c-cccCCchHHHHHHHHHHcccchHHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-S-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDT 318 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 318 (419)
+--+-|++|. ...|+++|.+++.. ++.+-+.+.. . .+++.++++..+..++|+-..++.++++...
T Consensus 273 ---~PDIvTmAKg-iGnG~Pl~AVvtt~--------EIa~v~~~~~~~fnTyggnP~a~avg~aVL~Vikee~LqE~aa~ 340 (442)
T KOG1404|consen 273 ---VPDIVTMAKG-IGNGFPLGAVVTTP--------EIADVLNQKSSHFNTYGGNPVACAVGLAVLKVIKEENLQENAAE 340 (442)
T ss_pred ---CccHHHHHhh-ccCCCcceeeecCH--------HHHHHHHhccccccccCCCchhHHHHHHHHHHHHHHhHHHHHHH
Confidence 2334489999 56789999999875 6888777664 2 2567788887777777776545555554443
Q ss_pred HHHHHHHHHHHhhcC-CCCCCCC-CCCceEEEEeecCcccccCCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769 319 LRESAEICYDGVKEI-PCISCPN-KPEGSMVTMVKLNPWLLEDIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIA 393 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~-~~~~~~~-~p~~g~~~~~~~~~~~~~~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris 393 (419)
...++.+.|.++ .+...+. ...-|.++-+.+-....+..+. -..++.+-.+++|++|.-|..++. .+||+
T Consensus 341 ---vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i~G~--vfria 415 (442)
T KOG1404|consen 341 ---VGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGIHGN--VFRIA 415 (442)
T ss_pred ---HHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccccce--EEEec
Confidence 444455555442 1112111 2344777766663322111111 123334444889999977776654 99999
Q ss_pred e--ecCHHHHHHHHHHH
Q 014769 394 F--CAEPSALKDGLGRM 408 (419)
Q Consensus 394 ~--~~~~~~l~~~l~~l 408 (419)
+ +.+.+|++.+++..
T Consensus 416 PPlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 416 PPLCITKEDIDFAVEYF 432 (442)
T ss_pred CCeeccHHHHHHHHHHH
Confidence 8 67999997776655
No 337
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.75 E-value=3.6e-15 Score=142.89 Aligned_cols=345 Identities=16% Similarity=0.151 Sum_probs=193.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHH--HHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAED--AIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~--a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+|+.++||..|.-... .-..+|.+.+ ++.+++..-.+.......-..+....+++.+.+..+ +...+.|+++++++
T Consensus 43 dG~~ylD~~~g~~~~~-lGh~~p~v~~~~ai~~ql~~l~~~~~~~~~~~~~~~~~la~~l~~~~~-p~~~~~v~f~~SGs 120 (443)
T PRK08297 43 TGRRYLDMFTFFASSA-LGMNHPALADDPEFRAELGRAALNKPSNSDVYTVEMARFVDTFARVLG-DPELPHLFFVDGGA 120 (443)
T ss_pred CCCEeeecccCHhhhc-CCCCChHHhhHHHHHHHHHHhhhhccccCCcCCHHHHHHHHHHHhhcC-CCCCCEEEEeCchH
Confidence 5888999988743321 1235788888 888888642210000000112233334444433221 12346999999999
Q ss_pred HHHHHHHHHhcC--------CC------CeEEeeCCCCCCcHHHHhhcCC-EEE---EEecc-------CCC-----Ccc
Q 014769 118 QAVEVILSVLAR--------PG------ANVLLPRPGWPYYEGIAQRKQV-EVR---HFDLL-------PER-----NWE 167 (419)
Q Consensus 118 ~al~~~~~~l~~--------~g------d~vlv~~p~~~~~~~~~~~~g~-~~~---~~~~~-------~~~-----~~~ 167 (419)
+|++.+++.... .| .+|+....+|++....+..... ... ..+.. +.. ...
T Consensus 121 EAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 200 (443)
T PRK08297 121 LAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGED 200 (443)
T ss_pred HHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccc
Confidence 999999988731 12 5799999999987544433321 100 00100 000 000
Q ss_pred ---c------ChHHHHHhhcC--CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 168 ---V------DLDAVEALADK--NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 168 ---~------~~~~l~~~~~~--~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
. +++.+++.+.. +..+.+|+.| ....|. ..|.++++++.++|++||+++|.||++.++...|..+ .
T Consensus 201 ~~~~~~~~~~~~~~~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~-a 279 (443)
T PRK08297 201 LEEVEALEAEALAQARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAW-A 279 (443)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHH-H
Confidence 0 23344455532 3345566666 444454 5899999999999999999999999999876555322 1
Q ss_pred ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH-HHH--hhhccccCCchHHHHHHHHHHcccchHH
Q 014769 235 MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID-SIK--DCLSIYSDIPTFIQGAIPQILEKTKEDF 311 (419)
Q Consensus 235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~l~--~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (419)
...++..+.++ +++|.+. +|.+++.+. +. +... .+. .....+++.++++..++.+.|+...++
T Consensus 280 ~~~~gv~PDiv---~~gK~l~-----~~a~l~~~~--i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~- 345 (443)
T PRK08297 280 YQQLGVRPDIV---AFGKKTQ-----VCGIMAGRR--VD---EVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEED- 345 (443)
T ss_pred HHhcCCCCCEE---Eeccccc-----ccceecchH--HH---HhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHhc-
Confidence 12222222334 5789842 233333321 00 1111 111 112235567888888877777643222
Q ss_pred HHHHHHHHHHHHHHHHHHhh----cCCCCC-CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 312 FCKLIDTLRESAEICYDGVK----EIPCIS-CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~----~~~~~~-~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
...+++++..+++.+.|+ +.|.+. .+ . ..|.++.+.++.. .....+...++ ++||++.|+.
T Consensus 346 --~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~v-r-g~G~~~~i~~~~~-----~~~~~~~~~l~-~~Gvl~~~~~---- 411 (443)
T PRK08297 346 --GLVENAARQGEYLLARLEELAAEFPAVVSNV-R-GRGLMCAFDLPTT-----ADRDEVIRRLW-EEGVLVLPCG---- 411 (443)
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHCCCcceee-e-ccceEEEEEecCH-----HHHHHHHHHHH-HCCEEEecCC----
Confidence 222333444444444443 343331 12 2 3466777777531 11345666664 6899998753
Q ss_pred CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
...+|+++ ..+++++++++++|.++++++
T Consensus 412 ~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 35688876 578999999999999999865
No 338
>PLN02452 phosphoserine transaminase
Probab=99.75 E-value=1.6e-15 Score=140.92 Aligned_cols=328 Identities=14% Similarity=0.104 Sum_probs=215.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV 112 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (419)
...+++|+.| | ..+++.|++++...+-+.. ....++ -..++-+.+.+.+++.++++-+.+-+++
T Consensus 5 ~~~~~~f~pG-P-----~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~--~f~~i~~~~~~~L~~l~~~p~~y~v~~l 76 (365)
T PLN02452 5 QGRVFNFSAG-P-----ATLPANVLAKAQAELYNWEGSGMSVMEMSHRGK--EFLSIIQKAEADLRELLDIPDNYEVLFL 76 (365)
T ss_pred CCceEeeeCC-C-----CCCCHHHHHHHHHHHhcccccCccccccCCCch--HHHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 3446889888 3 3568899999887653211 112222 2345555555555555554333345677
Q ss_pred cccHHHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCC--cccChHHHHHhhcCCccEEEEeC
Q 014769 113 TLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERN--WEVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
..|+|.+++.+...+..+|+++++...+.++ +...++.+|...+.... +..+ ..+++++++ ..++...|.+++
T Consensus 77 ~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r~~~~a~~~g~~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~v~~~h 153 (365)
T PLN02452 77 QGGASTQFAAIPLNLCKPGDKADFVVTGSWSKKAAKEAKKYCKTNVIASG-KDEKYTKIPSVSEWE--LTPDAKFVHICA 153 (365)
T ss_pred eCccHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHHHHHHhCCCcEEEec-CCCCCCCCCChHHcC--CCCCCcEEEECC
Confidence 7999999999999999999999888777665 34566777764333321 1122 135666542 234567888888
Q ss_pred CCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
....||+. .+ ++++. ++++|+|.+.+... .+..+..++ +...|..|.+|.+| +|.++++
T Consensus 154 nETstGv~~~~---~~~i~------~~~lvVDa~Ss~g~----~pidv~~~~-----v~~~saqK~lGP~G--l~~v~vr 213 (365)
T PLN02452 154 NETIHGVEFKD---YPDVG------NVPLVADMSSNFLS----KPVDVSKYG-----VIYAGAQKNVGPSG--VTIVIIR 213 (365)
T ss_pred CCCCCcEecCc---ccccC------CCeEEEECCccccC----cccCHHHcC-----EEEEecccccCCCC--eEEEEEc
Confidence 88899996 44 44443 37999999998632 333343333 23358999998788 7888886
Q ss_pred CCCCccchhhHHHHHHh-------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcC
Q 014769 268 DPNGIFQKSGIIDSIKD-------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
++ +++++.. ..+..++++....+++.++|+....+ .++.+.++.+++.+.+++.|++.
T Consensus 214 ~~--------~l~~~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~~l~~~l~~~ 285 (365)
T PLN02452 214 KD--------LIGNARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKADLLYDAIDES 285 (365)
T ss_pred HH--------HHhhcccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhC
Confidence 52 2222111 11233678888888888888875544 68899999999999999999987
Q ss_pred CCCC-CCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769 334 PCIS-CPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM 408 (419)
Q Consensus 334 ~~~~-~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l 408 (419)
+|+. ....+ ...+.+.+.++.. ....+|...+ +++|+...+|..-- +.+|+|+ +.+.++++.+++.+
T Consensus 286 ~G~y~~~~~~~~rs~~~vsF~~~~~-----~~~~~f~~~~-~~~g~~~~~G~r~~--gg~R~s~yna~~~~~v~~L~~~m 357 (365)
T PLN02452 286 NGFYVCPVEKSVRSLMNVPFTLGGS-----ELEAEFVKEA-AKAGMVQLKGHRSV--GGMRASIYNAMPLAGVEKLVAFM 357 (365)
T ss_pred CCcccCCCChHHhCCeEEEEEcCCc-----hhHHHHHHHH-HHCCCcccCCcccc--CceEEECcCCCCHHHHHHHHHHH
Confidence 6762 11122 2445566666542 2355666555 88899999987542 2399999 57899999999988
Q ss_pred HHHHHHH
Q 014769 409 KAFCQRH 415 (419)
Q Consensus 409 ~~~~~~~ 415 (419)
+++-+++
T Consensus 358 ~~f~~~~ 364 (365)
T PLN02452 358 KDFQAKH 364 (365)
T ss_pred HHHHHhc
Confidence 8887654
No 339
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.75 E-value=4.6e-15 Score=142.69 Aligned_cols=355 Identities=16% Similarity=0.100 Sum_probs=205.9
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGC 116 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~ 116 (419)
..+|+.+|||..|.-... .-.-+|.+.+++.+++.......+. .-..+.+..+++.+.+..+..... ..+++++++
T Consensus 54 D~dG~~ylD~~~g~~~~~-lGH~~p~v~~Ai~~q~~~~~~~~~~--~~~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SG 130 (459)
T PRK06931 54 DVEGNQYLDCLAGAGTLA-LGHNHPDVLQSIQDVLTSGLPLHTL--DLTTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSG 130 (459)
T ss_pred eCCCCEEEEcccchhhcc-CCCCCHHHHHHHHHHHhhhcccccc--ccCCHHHHHHHHHHHHhCCCccccceEEEeCCCc
Confidence 446889999988853321 1236789999999998753211111 112355556666665533211111 234667899
Q ss_pred HHHHHHHHHHhcC-C-CCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCC--Ccc----cChHHH--
Q 014769 117 KQAVEVILSVLAR-P-GANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPER--NWE----VDLDAV-- 173 (419)
Q Consensus 117 ~~al~~~~~~l~~-~-gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~--~~~----~~~~~l-- 173 (419)
++|++.+++.... . ..+|+....+|++....+..... .+..++..... .+. -+.+.+
T Consensus 131 sEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (459)
T PRK06931 131 ADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVKALTY 210 (459)
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCCCCCCCcEEeCCCccccccccCCchhHHHHHHH
Confidence 9999999987642 2 36799999999987655443211 11222211000 000 012222
Q ss_pred --HHhhc-----CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 174 --EALAD-----KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 174 --~~~~~-----~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
++.+. .+..+.+|+.| +.-.|. ..|.++++++.++|+++|+++|.||++.++...|..+ ....++..+.+
T Consensus 211 ~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~-a~~~~gv~PDi 289 (459)
T PRK06931 211 YFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKHGILLIVDEVQAGFARTGKMF-AFEHAGIEPDI 289 (459)
T ss_pred HHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhcCCcCchHH-HhhhcCCCCCE
Confidence 23332 12345566677 444465 5689999999999999999999999999886555422 22233333334
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
+ +++|.+ ..|+++|.+++++ + ++.+... ...+++.++++..++.+.|+....+. ..++.++..
T Consensus 290 v---t~gK~l-~gG~Pi~av~~~~--------~-~~~~~~~~~~~T~~gnpla~aaala~L~~l~~~~---l~~~~~~~G 353 (459)
T PRK06931 290 I---VMSKAV-GGGLPLAVLGIKK--------E-FDAWQPGGHTGTFRGNQLAMATGLTTLKILKEEN---LAQNAAERG 353 (459)
T ss_pred E---Eecccc-cCCcceeeeeeHH--------H-HhhccCCCCCCCCCCCHHHHHHHHHHHHHHHhCC---HHHHHHHHH
Confidence 4 568995 5689999887754 2 2333222 23356778888888888876533222 223333333
Q ss_pred HHHHHHhh----cCCCCCCCCCCCceEEEEeecCccc-cc----CCC-C---HHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769 324 EICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWL-LE----DIN-D---DIEFALKLAKEESVIVTPGIYVGLKNWL 390 (419)
Q Consensus 324 ~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~-~~----~~~-~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~ 390 (419)
+++.+.|+ +.|.+.. ...-|.++.+.+.... .. ... + ...+...+ .++||++.++... .+.+
T Consensus 354 ~~l~~~L~~l~~~~~~i~~--vrG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Gvl~~~~~~~--~~~l 428 (459)
T PRK06931 354 EWLKAQLAELQKRYPCIGN--VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKAC-FENGLLLERGGRN--GNVV 428 (459)
T ss_pred HHHHHHHHHHHHhCCCeEe--EecCceEEEEEEccCcccccccccCCccHHHHHHHHHHH-HHCCcEEeecCCC--CCEE
Confidence 44444443 3442221 2334666666663210 00 000 1 12344444 5689999775322 4678
Q ss_pred EEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 391 RIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 391 Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
|+.+ ..++++++++++++.+++.+..|
T Consensus 429 ~~~Ppl~it~~eid~~~~~l~~~l~~~~~ 457 (459)
T PRK06931 429 RLLPPLLITQAECEEFIDRFEQALLAAVK 457 (459)
T ss_pred EEECCCCcCHHHHHHHHHHHHHHHHHHHh
Confidence 8887 47999999999999999987654
No 340
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.75 E-value=8.2e-16 Score=130.82 Aligned_cols=327 Identities=13% Similarity=0.097 Sum_probs=205.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV 112 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (419)
..++++|+-++ +..+..+|++.++-..++..... -+|.+ -...|+.+||+|. ..++.++
T Consensus 66 ~k~ilnFcaNn---YLGLsshPeii~a~~~aleeyGaGlssvrfIcGtq~--iHk~LE~kiAqfh--------~rED~il 132 (417)
T KOG1359|consen 66 DKKILNFCANN---YLGLSSHPEIINAGQKALEEYGAGLSSVRFICGTQD--IHKLLESKIAQFH--------GREDTIL 132 (417)
T ss_pred ccceeeecccc---cccccCChHHHHHHHHHHHHhCCCccceeEEecchH--HHHHHHHHHHHHh--------CCCceEE
Confidence 45688888887 34567889999998888864211 11222 2357788888886 3478889
Q ss_pred cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCC
Q 014769 113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINP 189 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p 189 (419)
.+++-.|+..++.+++.|.|.|+.....|-++.+...... .+. .+|+-.++..+.+ ....++++..
T Consensus 133 ypscfdANag~feail~pedAvfSDeLNhASIIdGirLck----ry~-------h~dv~~l~~~l~~a~k~r~klv~TDg 201 (417)
T KOG1359|consen 133 YPSCFDANAGAFEAILTPEDAVFSDELNHASIIDGIRLCK----RYR-------HVDVFDLEHCLISACKMRLKLVVTDG 201 (417)
T ss_pred eccccccchHHHHHhcChhhhhhccccccchhhhhhHHHh----hhc-------cchhHHHHHHHHHhhhheEEEEEecc
Confidence 9999999999999999999999998888877655544332 111 2344445443322 1223344433
Q ss_pred -CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 190 -GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 190 -~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
-...|-+.| +++|.+++++||.++++||+|+.+.++..+...-..++. .+..+..++++|++| |---||..++
T Consensus 202 ~FSMDGdiaP---l~ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlG--ga~GGyttgp 276 (417)
T KOG1359|consen 202 VFSMDGDIAP---LEEISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALG--GASGGYTTGP 276 (417)
T ss_pred eeccCCCccc---HHHHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhc--CCCCCCccCC
Confidence 467888889 889999999999999999999988776544332222332 123578889999966 2334999997
Q ss_pred CCCCccchhhHHHHHHhhh-cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCL-SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~-~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.++... .+ +.+.++...-.+.++++-. -.-.+...+.+.+.+++++..+.- |++ +.....
T Consensus 277 ~--------~li~llrqr~RpylFSnslppavV~~a~ka~dll--m~s~~~i~~~~a~~qrfr~~me~a-Gft-Isg~~h 344 (417)
T KOG1359|consen 277 K--------PLISLLRQRSRPYLFSNSLPPAVVGMAAKAYDLL--MVSSKEIQSRQANTQRFREFMEAA-GFT-ISGASH 344 (417)
T ss_pred h--------hHHHHHHhcCCceeecCCCChhhhhhhHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhc-Cce-ecCCCC
Confidence 7 5777777653 22 1222211111222222211 112233455667777777776654 776 322111
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
. ..-+-+.+. ..+..+.++||+ .||+|..-+++.. ...+|+.+ ..++|+|+++++.+.++.+.+
T Consensus 345 P-I~pv~lGda-----~lA~~~ad~lLk-~Gi~Vigfs~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~ 413 (417)
T KOG1359|consen 345 P-ICPVMLGDA-----RLASKMADELLK-RGIYVIGFSYPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFL 413 (417)
T ss_pred C-ccceecccH-----HHHHHHHHHHHh-cCceEEeecCCcCCCCceEEEEEEehhcCHHHHHHHHHHHHHHHHhh
Confidence 1 222223221 235677788876 5999976555544 24577777 369999999999999887654
No 341
>PLN02263 serine decarboxylase
Probab=99.73 E-value=9e-14 Score=131.08 Aligned_cols=299 Identities=14% Similarity=-0.011 Sum_probs=200.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP 162 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~ 162 (419)
+..++++.+.+|+.+.+|.+.+...-++|+|||+++..++.+.++ +...+++++-+|+++...+..+|++++.++.+
T Consensus 130 ~s~~~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~KAa~llgi~~~~Vp~d- 208 (470)
T PLN02263 130 HSRQFEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVFKAARMYRMECVKVDTL- 208 (470)
T ss_pred hHHHHHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHHHHHHhcCCcceEeccC-
Confidence 567999999999999888643222358899999999998888765 33578888999999999999999999998875
Q ss_pred CCCcccChHHHHHhhcCCc---cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC-----eEEEcccccccccCC-CCCC
Q 014769 163 ERNWEVDLDAVEALADKNT---AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV-----MVVADEVYGHLTFGS-IPYT 233 (419)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~---~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~-----~li~De~~~~~~~~~-~~~~ 233 (419)
.++.+|+++|++++.+++ ..|+.+-++.++|.+=| +++|.++|+++|+ |+++|.+|+++...- ...+
T Consensus 209 -~~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDp---i~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~ 284 (470)
T PLN02263 209 -VSGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDD---LDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAP 284 (470)
T ss_pred -CCCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCC---HHHHHHHHHHcCCccCCeeEEEeccchhhHhhhccccc
Confidence 456899999999886543 34455667889999877 8999999999986 999999998865411 1111
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC--ccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchH
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG--IFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~--~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.+. +...-.-| ..+.+|. +...+.+|.++++++.. +..+ .+.+.... ...++-+......+-..|.....+
T Consensus 285 ~~d-f~~~vDSI-svD~HK~-l~~P~~cgvll~R~~~~~~~~~~---~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~ 358 (470)
T PLN02263 285 KVT-FKKPIGSV-SVSGHKF-VGCPMPCGVQITRMEHINVLSSN---VEYLASRDATIMGSRNGHAPIFLWYTLNRKGYR 358 (470)
T ss_pred ccC-CCcCccEE-EECCccc-cCCCcCEEEEEEehhhHhhhccC---hHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHH
Confidence 111 11111123 3379998 67778899999985210 0000 11111111 111121211122233334444457
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL 390 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~ 390 (419)
.+.+..++..++.+++.+.|++. ++..+..|.....+ ++-+ .+.. ..+|..+.+- .+.+
T Consensus 359 G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~-f~~p--------~~~~------~~~gW~L~~~-----~~~~ 417 (470)
T PLN02263 359 GFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVV-FERP--------KDEE------FVRRWQLACQ-----GNIA 417 (470)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEE-EecC--------chHH------hhcceEEccC-----CCcE
Confidence 88888999999999999999988 66656566655444 3332 1111 1246666542 3568
Q ss_pred EEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 391 RIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 391 Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
++++. .+.+.++++++.|++..+..
T Consensus 418 Hivvmphv~~~~id~fi~DL~~~~~~~ 444 (470)
T PLN02263 418 HVVVMPSVTIEKLDYFLKELVEKRSTW 444 (470)
T ss_pred EEEEcCCCCHHHHHHHHHHHHHHHhhh
Confidence 88883 47899999999999887643
No 342
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.73 E-value=1.1e-14 Score=139.42 Aligned_cols=344 Identities=15% Similarity=0.102 Sum_probs=189.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHH--HHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAE--DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~--~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+|+.+|||..|..... .-..+|.+. +++.+++............-.......+++.+.+..+ +...+.++++++++
T Consensus 36 dG~~ylD~~~g~~~~~-lGh~~p~v~~~~ai~~q~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~v~f~~sGs 113 (431)
T TIGR03251 36 DGRRYLDMFSFFASMA-LGMNHPALVDDLAFRARLGAAAVNKPSNSDVYTVAMARFVDTFARVLG-DPALPHLFFIEGGA 113 (431)
T ss_pred CCCChhhcccChhhcC-CCCCChhhhHHHHHHHHHHHhhhcccccCCCCCHHHHHHHHHHHHhcC-CCCcCEEEEeCCcH
Confidence 6899999988844322 123578888 8888887653211111101112223334443333211 11346899999999
Q ss_pred HHHHHHHHHhcC--------C------CCeEEeeCCCCCCcHHHHhhc-CCE-EE--EEec-------cC-------CCC
Q 014769 118 QAVEVILSVLAR--------P------GANVLLPRPGWPYYEGIAQRK-QVE-VR--HFDL-------LP-------ERN 165 (419)
Q Consensus 118 ~al~~~~~~l~~--------~------gd~vlv~~p~~~~~~~~~~~~-g~~-~~--~~~~-------~~-------~~~ 165 (419)
+|++.+++.... . +.+|+....+|++....+... |.. .. ..+. .+ ...
T Consensus 114 EAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 193 (431)
T TIGR03251 114 LAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPN 193 (431)
T ss_pred HHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCcccCCccccc
Confidence 999999987631 1 367999999999865443322 211 00 0110 00 000
Q ss_pred cc-------cChHHHHHhhc--CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 166 WE-------VDLDAVEALAD--KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 166 ~~-------~~~~~l~~~~~--~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
.. -+++.++..+. .+..+.+++.| +...|. ..+++++++|.++|++||+++|+||++.++...|..+ .
T Consensus 194 ~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~-a 272 (431)
T TIGR03251 194 LDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQTGVGLTGTAW-A 272 (431)
T ss_pred cchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecchhccCccchHH-H
Confidence 00 12333444443 23344455555 555665 4789999999999999999999999999876655322 1
Q ss_pred ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH-HH--hhhccccCCchHHHHHHHHHHcccchH-
Q 014769 235 MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS-IK--DCLSIYSDIPTFIQGAIPQILEKTKED- 310 (419)
Q Consensus 235 ~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~-l~--~~~~~~~~~~~~~~~a~~~~l~~~~~~- 310 (419)
...++..+.++ +++|.+ +. .|++.... +. ++... +. .....+++.++++..++.+.|+....+
T Consensus 273 ~~~~gv~PDi~---~~gK~~--~~--~g~~~~~~---i~---~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~~~ 339 (431)
T TIGR03251 273 YQQLGVQPDIV---AFGKKT--QV--CGIMAGRR---VD---EVADNVFAVPSRLNSTWGGNLVDMVRATRILEIIEEER 339 (431)
T ss_pred HHhcCCCCCEE---EecccC--cc--ceEEecch---HH---HhhhhcccCccccCCCCCCCHHHHHHHHHHHHHHHhcC
Confidence 22223222333 468984 22 35554321 00 11111 11 012234566777777777777653222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeE
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWL 390 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~ 390 (419)
.+++..+.-+..++.+.+...+.+++... ....|.++.+.++.. .....+...+ .++||++.|.. ...+
T Consensus 340 l~~~~~~~g~~l~~~L~~l~~~~~~~i~~-vrg~G~~~~i~~~~~-----~~~~~~~~~l-~~~Gvl~~~~g----~~~l 408 (431)
T TIGR03251 340 LVDNARVQGAHLLARLHELAAEFPHLVSN-PRGRGLMCAFDLPST-----ADRDEVIRQL-YREGVLLLGCG----ERSI 408 (431)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCccceec-ccccceeEEEEeCCH-----HHHHHHHHHH-HhCCeEEecCC----CCeE
Confidence 22333333333344444333334423211 223366667777531 1123566566 56899997753 3568
Q ss_pred EEEe--ecCHHHHHHHHHHHHH
Q 014769 391 RIAF--CAEPSALKDGLGRMKA 410 (419)
Q Consensus 391 Ris~--~~~~~~l~~~l~~l~~ 410 (419)
|+++ ..++++|+++++.|.+
T Consensus 409 r~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 409 RFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred EEECCccCCHHHHHHHHHHHHh
Confidence 9887 4689999999999875
No 343
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.72 E-value=2.3e-14 Score=147.11 Aligned_cols=309 Identities=16% Similarity=0.093 Sum_probs=196.0
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cHHHHHHHHHHHhc----CCCC----eEEeeCCCCCCcHHHHhhcCC
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GCKQAVEVILSVLA----RPGA----NVLLPRPGWPYYEGIAQRKQV 153 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~~~al~~~~~~l~----~~gd----~vlv~~p~~~~~~~~~~~~g~ 153 (419)
.+|+.++...+.+++.+..|. +++.+.. |++.+....+.++. .+|+ +|++++..|......+...|+
T Consensus 537 ~qG~l~~i~e~q~~l~eltG~----d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp~sa~~~G~ 612 (954)
T PRK05367 537 AAGYRELIDQLEAWLAEITGY----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNPASAVMAGM 612 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCC----CCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhHHHHHHCCC
Confidence 356778888888888876664 3565554 55555544443333 4555 599999999888888899999
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI 230 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 230 (419)
+++.++++. +..+|+++|++++++ ++.+|++++|++-++...+ +++|+++|+++|+++++|.++......
T Consensus 613 ~vv~v~~d~--~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~---I~eI~~i~h~~G~~v~VDgA~~~al~~-- 685 (954)
T PRK05367 613 KVVVVACDE--NGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEET---IREICEIVHEHGGQVYLDGANMNAQVG-- 685 (954)
T ss_pred EEEEECCCC--CCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCC---HHHHHHHHHHcCCEEEEECcChhhccC--
Confidence 999998763 347999999998865 3566778888876444466 999999999999999999999743221
Q ss_pred CCCCccccCCCCcEEEEecCCCcCCC----CCceeEEEEeeCCCCccchhhHHHHHHhhh-------ccccCC--chH--
Q 014769 231 PYTPMGLFGSIVPVITLGSISKRWLV----PGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-------SIYSDI--PTF-- 295 (419)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~s~sK~~~~----~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-------~~~~~~--~~~-- 295 (419)
......++.+ ++..+++|+|+. .|..+|++.++.. +...+.... ...+.. +..
T Consensus 686 -l~~pg~~GAD---i~~~s~HK~f~~P~G~GGPg~G~l~vr~~--------l~p~lpg~~v~~~~~~~~~g~v~ta~~g~ 753 (954)
T PRK05367 686 -LARPGDIGAD---VSHLNLHKTFCIPHGGGGPGVGPIGVKAH--------LAPFLPGHPVQIAGGETGIGAVSAAPFGS 753 (954)
T ss_pred -CCChhhcCCC---EEEecCcccCCCCcCCCCCceEEEeeccc--------ccccCCCCccCcCCCCCCcCcchhHHHHH
Confidence 1111234443 778899999753 3556899888641 222211110 000111 111
Q ss_pred --HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEeecCcccccCCCCHHHHHHHHH
Q 014769 296 --IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--SMVTMVKLNPWLLEDINDDIEFALKLA 371 (419)
Q Consensus 296 --~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll 371 (419)
....+..++.....+.+.+..++...+.+++.+.|++...+. +..|.+ ..-+.+++.........+..++.++|
T Consensus 754 al~~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~~~~~-~~~~~~~~~~e~i~~~~~~~~~~g~~~~di~krL- 831 (954)
T PRK05367 754 ASILPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDHYPVL-YTGANGRVAHECILDLRPLKESTGITVDDIAKRL- 831 (954)
T ss_pred HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-ccCCCCCcccceEEEeecccccCCCCHHHHHHHH-
Confidence 122233344444467788888888889999999997642332 212211 01122233211100012457787777
Q ss_pred HhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 372 KEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 372 ~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.++|+.... ..|-..+.+||++. .+++||+++++.+..+..+..+
T Consensus 832 ~d~G~~~~t-~~~pv~~~l~i~ptE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 832 IDYGFHAPT-MSFPVAGTLMVEPTESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHCCCeEee-cCCccCCEEEEEeeecCCHHHHHHHHHHHHHHHHHHHH
Confidence 778998644 34545789999994 6889999999999888876543
No 344
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.72 E-value=5.4e-15 Score=140.57 Aligned_cols=281 Identities=17% Similarity=0.151 Sum_probs=196.6
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC--------
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP-------- 130 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~-------- 130 (419)
.+++...+++...+..... ...-..+..++.+.+..++.+.++.+ ....=.+|+|+|+++..++.+....
T Consensus 73 ~~~~~a~~~~~~~~~~nl~-d~~~~p~a~~~E~~~v~~l~~l~~~~-~~~~G~~t~GgTean~lal~aar~~~~~~~~~~ 150 (460)
T COG0076 73 RVPPVAAELLVSALNKNLG-DPDESPAAAELEERVVNMLSDLLGAP-EEASGTFTSGGTEANLLALLAARERWRKRALAE 150 (460)
T ss_pred CCHHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhCCC-CCCceEEEcChHHHHHHHHHHHHHHHHHHhhhc
Confidence 4566777777776654321 11122367899999999999988865 4445689999999999887765421
Q ss_pred CC------eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE--EEEeCCCCccccCCCHHHH
Q 014769 131 GA------NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA--MVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 131 gd------~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--v~i~~p~nptG~~~~~~~l 202 (419)
+. +|+++.-.|+++...+..+|++...+++++. +..+|++++++++++.+.. |+-+.++.+||.+=| +
T Consensus 151 ~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDd---i 226 (460)
T COG0076 151 SGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPT-DYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDD---I 226 (460)
T ss_pred ccccCCCCeEEecCcchhHHHHHHHHhCCCceeEEeccC-ccccCHHHHHHHHHhhccCceEEEEecCCCCCccCC---H
Confidence 11 6899999999999999999999999998876 7789999999999987766 888888999999877 9
Q ss_pred HHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 281 (419)
++|.++|+++++++++|.+|+++..-- ..... ..+.-..-.-+..+++|. +...+.+||++.++++. +.+.
T Consensus 227 ~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~-~~f~l~~vdSIt~d~HK~-g~aP~~~G~il~rd~e~------l~~~ 298 (460)
T COG0076 227 EELADIAEEYGIWLHVDAAFGGFLLPFLEPDGR-WDFGLEGVDSITVDGHKY-GLAPIGCGVVLFRDEEA------LRRI 298 (460)
T ss_pred HHHHHHHHHcCCcEEEEccccceeecccCccch-hhcCCCCceEEEECcccc-cCCCCCceEEEEECHHH------hhhh
Confidence 999999999999999999999876421 11111 011111112334489998 78889999999988531 2222
Q ss_pred HHhhh---------cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769 282 IKDCL---------SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV 350 (419)
Q Consensus 282 l~~~~---------~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 350 (419)
+.... ++ .++.+.-...++...+.....+.+.++.++..+..+.+.+.|++.+.++.+..|. ...+.+
T Consensus 299 ~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~-l~~V~f 377 (460)
T COG0076 299 LIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPE-LPIVAF 377 (460)
T ss_pred hhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCc-cceEEE
Confidence 22111 11 1111221223333344444468889999999999999999999986688665564 445566
Q ss_pred ecCc
Q 014769 351 KLNP 354 (419)
Q Consensus 351 ~~~~ 354 (419)
+.++
T Consensus 378 r~~~ 381 (460)
T COG0076 378 RLKD 381 (460)
T ss_pred EcCC
Confidence 6654
No 345
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.71 E-value=4.1e-14 Score=137.04 Aligned_cols=311 Identities=17% Similarity=0.150 Sum_probs=193.9
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCC----------C-CCCcEEEcccHHHHHHHHHHHhcC------------------
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYK----------L-SADDVYVTLGCKQAVEVILSVLAR------------------ 129 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~----------~-~~~~i~~t~g~~~al~~~~~~l~~------------------ 129 (419)
.+..++...++++.+.+|+.+..+.. . +...-++|+|+|+++..++.+..+
T Consensus 120 ~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~ 199 (522)
T TIGR03799 120 KIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLF 199 (522)
T ss_pred eeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccch
Confidence 44445577899999999998865311 1 112357789999998887665432
Q ss_pred --------CCCeEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhc----CCccEEEEe--CCCCc
Q 014769 130 --------PGANVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVII--NPGNP 192 (419)
Q Consensus 130 --------~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~--~p~np 192 (419)
++..|++.+-.|+++...+...|+ +++.++++ .++.+|++.|++++. .+++.++++ ..++.
T Consensus 200 ~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d--~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~ 277 (522)
T TIGR03799 200 AALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTD--ANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTE 277 (522)
T ss_pred hhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeC--CCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcC
Confidence 124678888899999888888888 67888875 346899999999875 344445444 55678
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
||.+-| +++|+++|+++|+++++|.+|+....-.... ..+..+.. -..+..+.+|++ .....+|.++++++.
T Consensus 278 tGaiDp---l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~--aDSit~d~HK~l-~~P~g~G~llvr~~~- 350 (522)
T TIGR03799 278 TGNIDP---LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIER--ADSVTIDAHKQL-YVPMGAGMVLFKDPA- 350 (522)
T ss_pred CCCcCC---HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchh--CCEEEEChhhcC-CcCcccEEEEEeCHH-
Confidence 999999 9999999999999999999998643211111 01122211 125566899973 444668999887632
Q ss_pred ccchhhHHHHHHhhh--------------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 272 IFQKSGIIDSIKDCL--------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~--------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
+.+.+.... .+..+.+..+ ..+...++......++++.++..++.+++.+.|.+.|+++
T Consensus 351 ------~~~~~~~~~~Yl~~~~~~d~~~~~legsR~~~a-l~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~~e 423 (522)
T TIGR03799 351 ------LMSAIEHHAEYILRKGSKDLGSHTLEGSRPGMA-MLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPDFE 423 (522)
T ss_pred ------HHHHhccCcchhcCCCCCccccceeecCcchHH-HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeE
Confidence 222222210 0111112111 2334444444457889999999999999999999988998
Q ss_pred CCCCCCceEEEEeec-CcccccCC---------C-----C--HHHHHHHHHHhcCeEeecCCC-----C-CC-CCeEEEE
Q 014769 338 CPNKPEGSMVTMVKL-NPWLLEDI---------N-----D--DIEFALKLAKEESVIVTPGIY-----V-GL-KNWLRIA 393 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~-~~~~~~~~---------~-----~--~~~~~~~ll~~~gv~v~~g~~-----~-~~-~~~~Ris 393 (419)
++..|.-+... +++ |....+.. . + ...+.+++ .+.|........ + +. ...+|++
T Consensus 424 l~~~p~l~iv~-Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~-~~~G~~~vs~t~l~~~~~~g~~~~~lR~~ 501 (522)
T TIGR03799 424 LVTEPELCLLT-YRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQ-REAGKSFVSRTRLTPAQYDHQPTVVFRVV 501 (522)
T ss_pred EecCCCccEEE-EEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEecccccCCCCcEEEEEE
Confidence 66566555444 343 32110000 0 0 02333444 344554333111 1 11 2469999
Q ss_pred ee---cCHHHHHHHHHH
Q 014769 394 FC---AEPSALKDGLGR 407 (419)
Q Consensus 394 ~~---~~~~~l~~~l~~ 407 (419)
+. +++++|+.+++.
T Consensus 502 ~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 502 LANPLTTHEILQDILDE 518 (522)
T ss_pred ecCCCCCHHHHHHHHHH
Confidence 84 577888887764
No 346
>PRK15029 arginine decarboxylase; Provisional
Probab=99.71 E-value=1.9e-14 Score=143.22 Aligned_cols=234 Identities=11% Similarity=0.028 Sum_probs=147.3
Q ss_pred CCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 83 NSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 83 ~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
+.|. .+..+..|+.+ | .....++++|+|.++.+++.+++++||+|+++..||-+....+...|+.++++.-.
T Consensus 203 p~G~I~eAq~~aA~~f----g---A~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~al~L~ga~Pvyl~P~ 275 (755)
T PRK15029 203 HTGAFGESEKYAARVF----G---ADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLILTGAKPVYMVPS 275 (755)
T ss_pred CCcHHHHHHHHHHHHh----C---CCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEeccc
Confidence 4454 45555555555 2 23568999999999999999999999999999999999999999999999988532
Q ss_pred CCCCc----ccC-----hHHHHHhhcCC--cc--------EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 162 PERNW----EVD-----LDAVEALADKN--TA--------AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 162 ~~~~~----~~~-----~~~l~~~~~~~--~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
- +.+ .++ .+.+++++... .+ ++++++|+. -|++++ +++|+++|+++++.+++||||
T Consensus 276 ~-~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAh 350 (755)
T PRK15029 276 R-NRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYN---AKEAQDLLEKTSDRLHFDEAW 350 (755)
T ss_pred c-cccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeC---HHHHHHHHHhcCCeEEEECcc
Confidence 2 222 234 78888877432 23 789999877 799998 999999999999999999999
Q ss_pred cc-cccCCCCCCCcccc-----C-CCCcEEEEecCCCcCCCCCceeEE-EEeeCCCCccchhhHHHHHHhhhccccCCch
Q 014769 223 GH-LTFGSIPYTPMGLF-----G-SIVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPT 294 (419)
Q Consensus 223 ~~-~~~~~~~~~~~~~~-----~-~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 294 (419)
+. +.|.. .++....+ . ....++++.|++|. ++++..|. +-..+.....+...+.+.+.... +++||.
T Consensus 351 Gah~~F~~-~~p~~sa~~~~~~~~~Gad~~vvqStHKt--L~alTQaS~LHv~~~~~~id~~r~~~~l~~~q--STSPSY 425 (755)
T PRK15029 351 YGYARFNP-IYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMMHA--TTSPLY 425 (755)
T ss_pred ccccccCc-cccccccccccccccCCCceEEEEchhhc--ccchhhhhhheeCCCccccCHHHHHHHHHHHc--CCCcHH
Confidence 75 34433 22221122 1 11235999999998 56666544 44433211221112333332222 345565
Q ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
+..+.+..+........-.+..+++.+....+++.+.++
T Consensus 426 ~LmASLD~ar~~m~~~~G~~l~~~~i~~~~~~r~~l~~~ 464 (755)
T PRK15029 426 AICASNDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 554444333222111122333444444455555555444
No 347
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.71 E-value=7.2e-15 Score=140.71 Aligned_cols=335 Identities=14% Similarity=0.123 Sum_probs=187.2
Q ss_pred hhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 36 VNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 36 ~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+...+|+.+|||..|.-... .-.-+|.+.+++.+++..... +.. +....++.+.+++.. + ..+.+++++
T Consensus 42 l~D~dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~--~~~~~~~~~~la~~l~~~~----p---~~~~v~f~~ 111 (431)
T PRK06209 42 VWDVDGNEYIEYGMGLRAVG-LGHAYPPVVEAVREALQDGCN--FTRPSAIELDAAESFLELI----D---GADMVKFCK 111 (431)
T ss_pred EEeCCCCEEEEccccccchh-cCCCCHHHHHHHHHHHHhCcC--CCCCCHHHHHHHHHHHHhC----C---ccceEEEec
Confidence 33456899999998843322 223578999999999986542 322 111113444444443 1 236899999
Q ss_pred cHHHHHHHHHHHhcC-CC-CeEEee-CCCCCCcHHHHh-----hcCCE--E--EEEeccCCCCcccChHHHHHhhcC--C
Q 014769 115 GCKQAVEVILSVLAR-PG-ANVLLP-RPGWPYYEGIAQ-----RKQVE--V--RHFDLLPERNWEVDLDAVEALADK--N 180 (419)
Q Consensus 115 g~~~al~~~~~~l~~-~g-d~vlv~-~p~~~~~~~~~~-----~~g~~--~--~~~~~~~~~~~~~~~~~l~~~~~~--~ 180 (419)
++++|++.+++.... .| ..|+.. ..+|+++..... ..+.. . ....+ . --|++.+++.++. +
T Consensus 112 sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~--~---~~d~~~l~~~l~~~~~ 186 (431)
T PRK06209 112 NGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF--R---YNDIASLEALFEDHPG 186 (431)
T ss_pred CHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc--C---CCCHHHHHHHHHhCCC
Confidence 999999999987542 34 345544 233332111100 00110 0 00111 0 1267888887753 3
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
..+.+++.|- .|...+.+++++|.++|++||+++|+||++.++...+..... .++..+. + .+++|.++ .|+.
T Consensus 187 ~~aavi~Epv--~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~tG~~~~~~g~~~--~~gv~PD-i--~t~gK~lg-gG~p 258 (431)
T PRK06209 187 RIACVILEPA--TADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRGAQK--LYGIVPD-L--SCFGKALG-NGFA 258 (431)
T ss_pred CEEEEEEccc--cCCCCCHHHHHHHHHHHHHcCCEEEEEcccccCCcCcchhhH--HhCCCcc-e--eeehhhhc-CCcc
Confidence 4556666774 344778999999999999999999999999876443211111 1222222 2 46899965 5788
Q ss_pred eEEEEeeCCCCccchhhHHHH--HHh---h----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 261 FGWLVTNDPNGIFQKSGIIDS--IKD---C----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~--l~~---~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
+|++++++ ++++. +.. . ...+++++++...++.+.|+...++. ..++++++.+++++.|+
T Consensus 259 ~~av~~~~--------~i~~~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~ 327 (431)
T PRK06209 259 VSALAGKR--------EYMELGGLEHTDRERVFLLSTTHGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVN 327 (431)
T ss_pred cEEEEEHH--------HHHhhhcccccCCCCceeeccCCCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHH
Confidence 99999865 45554 211 1 12345566677777766666532221 23344444444444443
Q ss_pred ----cCCCCCCCCCCCceEEEEeecCcccccCCCC-H--HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHH
Q 014769 332 ----EIPCISCPNKPEGSMVTMVKLNPWLLEDIND-D--IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDG 404 (419)
Q Consensus 332 ----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~-~--~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~ 404 (419)
++ ++.......+.+..+.-+.... .+..+ . ..+..++ .++||.+.| ++++...++++|+++
T Consensus 328 ~~~~~~-~~~~~vr~~G~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-~~~Gi~~p~---------l~is~~ht~~dId~~ 395 (431)
T PRK06209 328 EAAAEH-GLQDHVRVSGRPCCLTYSTLDG-NGQPSQAFRTLFLQET-IRRGVLMPS---------LVVSYAHGDADIERT 395 (431)
T ss_pred HHHHhC-CCCeEEEeecceEEEEEecCCc-ccCCcHHHHHHHHHHH-HHCCccccc---------ccccccCCHHHHHHH
Confidence 34 2221111122222222111100 00001 1 1344555 557997632 467767899999999
Q ss_pred HHHHHHHHHHHh
Q 014769 405 LGRMKAFCQRHT 416 (419)
Q Consensus 405 l~~l~~~~~~~~ 416 (419)
++.+.+++++..
T Consensus 396 l~~l~~~l~~~~ 407 (431)
T PRK06209 396 IDAVHGALGVYR 407 (431)
T ss_pred HHHHHHHHHHHH
Confidence 999999998763
No 348
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=1e-14 Score=130.18 Aligned_cols=347 Identities=16% Similarity=0.101 Sum_probs=214.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
..+..+|||..++-...+. +..|++.+++.+++.... .+.|-..+ .-++.+.+.+.+.+ + .++.|++++++
T Consensus 53 ~~g~EyiD~~ssw~~~~~G-hanpev~ral~~q~~k~~hs~~~~~t~e-av~l~~~l~~~~~~----~-~~~rvff~nsG 125 (433)
T KOG1401|consen 53 PDGKEYIDFTSSWAVTILG-HANPEVARALAEQAKKLGHSSNGYFTLE-AVELEEVLSAVLGK----G-SAERVFFCNSG 125 (433)
T ss_pred CCcceeeeeccceeccccC-CCCHHHHHHHHHHHhhheeccCccccHH-HHHHHHHHHhcccC----C-CccEEEEecCC
Confidence 3588999999996554433 458999999999887642 22222211 23444444444422 2 78999999999
Q ss_pred HHHHHHHHHHhcC------CCC--eEEeeCCCCCCcHHHHhh-cCCEEEEEeccC---CCCc--ccChHHHHHhhcCCc-
Q 014769 117 KQAVEVILSVLAR------PGA--NVLLPRPGWPYYEGIAQR-KQVEVRHFDLLP---ERNW--EVDLDAVEALADKNT- 181 (419)
Q Consensus 117 ~~al~~~~~~l~~------~gd--~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~---~~~~--~~~~~~l~~~~~~~~- 181 (419)
|+|++.++....+ +-+ .++....+|++-...+.. .+......+.+| +-.. --|...+++.+..+.
T Consensus 126 TeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k~~~~h~~ 205 (433)
T KOG1401|consen 126 TEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEKLFESHKG 205 (433)
T ss_pred cHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHHHhhcccccCCCCCCCCCceeecccCCHHHHHHHHHhCCC
Confidence 9999999987643 112 488899999875433322 222222222211 1000 015778888887654
Q ss_pred -cEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 182 -AAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 182 -~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
.+.+|+.| +.-.|. ..+++.+..|.++|+++++++|.||++.++...|.... ..-+...+.+. ++.|.+ ..|
T Consensus 206 ~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a-~e~~~~~PDI~---t~aK~L-~gG 280 (433)
T KOG1401|consen 206 EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWA-QEYFGVTPDIT---TVAKPL-GGG 280 (433)
T ss_pred ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHH-HHHhCcCCcce---eehhhc-cCC
Confidence 45566666 555666 47899999999999999999999999998766554321 11122222223 678984 678
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhhh----ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL----SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
+++|...+++ ++++.+..-. ..+++.++++..++...|+... .++++.+...-+..++.+.+.+.+.
T Consensus 281 lPigA~~v~~--------kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~e~~~~~ 352 (433)
T KOG1401|consen 281 LPIGATGVRD--------KVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLDEYLKKT 352 (433)
T ss_pred ceeEEEeehH--------HHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 9999999976 5777766432 3457788999999988888744 6777777777788888888888765
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH-------HhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA-------KEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLG 406 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll-------~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~ 406 (419)
+...+. .-..++++.+.+....... .|.......+. .+.|+.+.|-. -+++..++|.++.+++
T Consensus 353 ~~~i~g-~~grgl~ig~~~~~p~~~~-~d~~~~~~ll~~~~~~~~~~~gv~i~P~~--------~l~~~~~~E~i~~~l~ 422 (433)
T KOG1401|consen 353 PNSICG-GVGRGLVIGFEFEGPVYKF-ADAAREQGLLILTLGKGLLEEGVRIAPIY--------LLTVEHTPEVIQRLLT 422 (433)
T ss_pred CCceee-eeeeEEEEEEEEeechhhh-hhhhhhhhHHHHHHhcccccceEEEeccc--------cccccCcHHHHHHHHH
Confidence 333212 2344555555443211100 11111111111 11234443310 1222345899999999
Q ss_pred HHHHHHHHH
Q 014769 407 RMKAFCQRH 415 (419)
Q Consensus 407 ~l~~~~~~~ 415 (419)
.+.+.+.++
T Consensus 423 i~~~~l~~~ 431 (433)
T KOG1401|consen 423 ILEKVLSAL 431 (433)
T ss_pred HHHHHHHHh
Confidence 999988765
No 349
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.70 E-value=1e-14 Score=139.22 Aligned_cols=341 Identities=11% Similarity=0.065 Sum_probs=190.9
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHH-HhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDA-VRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~-~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
..+|+.+|||..|..... .-.-+|.+.+++.++ +... ....|... ...++.+.+++.+.... +-+.+.+++++
T Consensus 54 D~dG~~ylD~~sg~~~~~-lGh~~p~i~~Ai~~q~~~~~l~~~~~~~~~-~~~~la~~l~~~l~~~~--p~~~~~v~f~~ 129 (464)
T TIGR00699 54 DVDGNRLLDLYSQISSIP-IGYNNPALLKAAQSPEMATTLINRPALGNF-PSKDWAKILKEGILKVA--PKGQDQVWTGM 129 (464)
T ss_pred eCCCCEEEEccCCHhhhc-CCCCCHHHHHHHHHHHHHHhhcccccCCcH-HHHHHHHHHHHhHHhhC--CCCcCEEEEeC
Confidence 346889999998854422 124689999999984 2221 11122221 12234444433222222 12336899999
Q ss_pred cHHHHHHHHHHHhcC--------------------------CC---CeEEeeCCCCCCcHHHHhhcCC-E----------
Q 014769 115 GCKQAVEVILSVLAR--------------------------PG---ANVLLPRPGWPYYEGIAQRKQV-E---------- 154 (419)
Q Consensus 115 g~~~al~~~~~~l~~--------------------------~g---d~vlv~~p~~~~~~~~~~~~g~-~---------- 154 (419)
++++|++.+++.... +| .+|+....+|++....+..... .
T Consensus 130 SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~ 209 (464)
T TIGR00699 130 SGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAF 209 (464)
T ss_pred CcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCCcCCEEEEECCCcCCccHHHHHhcCCccccccCCCCC
Confidence 999999999987631 11 2699999999986544332211 1
Q ss_pred -EEEEeccCCC-Cc-----------ccChHHHHHhhcC--CccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEE
Q 014769 155 -VRHFDLLPER-NW-----------EVDLDAVEALADK--NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 155 -~~~~~~~~~~-~~-----------~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li 217 (419)
...++..... .+ .-+++.+++.+.. +..+.+|+.| ....|... +.++++++.++|+++|+++|
T Consensus 210 ~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI 289 (464)
T TIGR00699 210 DWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFI 289 (464)
T ss_pred CceecCCCCcccccccccccchhHHHHHHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 0111111000 00 0124556666642 2345566666 55567654 89999999999999999999
Q ss_pred EcccccccccCCCCCCCccccCCC--CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh-hhccccCCch
Q 014769 218 ADEVYGHLTFGSIPYTPMGLFGSI--VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CLSIYSDIPT 294 (419)
Q Consensus 218 ~De~~~~~~~~~~~~~~~~~~~~~--~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~ 294 (419)
+||++.++...|..+ ....++.. +.++ +++|.++..| +++.++ ....... ....+++.++
T Consensus 290 ~DEV~tGfGrtG~~f-a~e~~gv~~~PDi~---t~gK~lg~gG----~~~~~~---------~~~~~~~~~~~~T~~gnp 352 (464)
T TIGR00699 290 VDEVQTGVGATGKFW-AHEHWNLDDPPDMV---TFSKKFQTAG----YFFHDP---------AFRPNKPYRQFNTWMGDP 352 (464)
T ss_pred EeeeeeCCCCCcchh-HHHhcCCCCCCCEE---EehhhhccCC----ccccch---------hccCCCCcccccCCCCCH
Confidence 999998876555322 11222221 2233 6789864444 333321 1111011 1223566777
Q ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHH
Q 014769 295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE----IPC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALK 369 (419)
Q Consensus 295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ 369 (419)
++..++.+.|+....+ ...++.+++.+++.+.|++ +|. +..+.....|+++-+.++.. .....+...
T Consensus 353 ~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~~-----~~~~~i~~~ 424 (464)
T TIGR00699 353 SRALILREIIQEIKRK---DLLENVAHVGDYLYTGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPDE-----AKRDKLLKK 424 (464)
T ss_pred HHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCceeeecccCeEEEEEEecCCH-----HHHHHHHHH
Confidence 7777777666653222 2223333333444444433 442 22121114577777777531 013455555
Q ss_pred HHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 370 LAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 370 ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
+ .++||++.+. ..+.+||.+ ..++++|++++++|.+++
T Consensus 425 ~-~~~Gvl~~~~----g~~~ir~~Ppl~it~~eid~~~~~l~~~~ 464 (464)
T TIGR00699 425 A-RNNGVNIGGC----GVKAIRLRPMLVFQKHHADIFLEIISKII 464 (464)
T ss_pred H-HHCCcEEecC----CCCeEEEeCCCCCCHHHHHHHHHHHHHhC
Confidence 5 5579999764 247899998 479999999999998764
No 350
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.70 E-value=6e-14 Score=133.57 Aligned_cols=314 Identities=16% Similarity=0.119 Sum_probs=183.1
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCC-----CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATN-----SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd 132 (419)
.+.++.+.+++.+.+.......|.-. .-+..+++.+++++ + .+..+++++++.|+..++.+ +.+||
T Consensus 91 s~l~~~vieAv~~~~~~y~~l~~~l~~g~~g~r~~~le~~lA~l~------g--ae~alvv~sg~aAi~l~l~~-l~~Gd 161 (454)
T TIGR00474 91 APLAEEAIEAVTDAARGYSNLEYDLETGKRGSRYSHVEGLLCELT------G--AEDALVVNNNAAAVLLALNT-LAKGK 161 (454)
T ss_pred CCCCHHHHHHHHHHHhcccchhccccccccchHHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHH-hCCcC
Confidence 35689999999888764321122211 11367888888887 2 23466778888899888865 47899
Q ss_pred eEEeeCCCCCC------cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc--c--cCCCHHHH
Q 014769 133 NVLLPRPGWPY------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC--G--NVFTYHHL 202 (419)
Q Consensus 133 ~vlv~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G--~~~~~~~l 202 (419)
+|++.+..|.. +...+...|++++.++... ..++++++++++++++++++++++|++ | ...| +
T Consensus 162 eVIvs~~e~v~~ggs~~i~~~~~~~G~~~~~v~~~~----~~~l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~d---l 234 (454)
T TIGR00474 162 EVIVSRGELVEIGGSFRIPDVMEQSGAKLVEVGTTN----RTHLKDYEDAITENTALLLKVHTSNYRIVGFTEEVS---I 234 (454)
T ss_pred EEEECCChhhhhcchhhHHHHHHHcCCEEEEeCCCC----CCCHHHHHHhcCcCCEEEEEEccCcccccCCCCCCC---H
Confidence 99999876432 2345677899988876421 257899999999999999999999985 5 3667 9
Q ss_pred HHHHHHHHhCCCeEEEcccccccccCC----CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLTFGS----IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~~~~----~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
++|+++|+++|+++++|...+.+.-.+ ...+.+......+-.+++.|.+|.++.| ..|++++++ ++
T Consensus 235 ~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp--~~G~i~g~~--------~~ 304 (454)
T TIGR00474 235 AELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGP--QAGIIVGKK--------EL 304 (454)
T ss_pred HHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCCEEEecCccccCCC--eEEEEEECH--------HH
Confidence 999999999999999997644321000 0111111111122238888999986555 479998865 45
Q ss_pred HHHHHhhhc-cccCCchHH----HHHHHHHHcccch--------HHHHHHHHHHHHHHHHHHHHhhcC--CCCCC--CC-
Q 014769 279 IDSIKDCLS-IYSDIPTFI----QGAIPQILEKTKE--------DFFCKLIDTLRESAEICYDGVKEI--PCISC--PN- 340 (419)
Q Consensus 279 ~~~l~~~~~-~~~~~~~~~----~~a~~~~l~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~--~~- 340 (419)
++.++...- ......-.. +..+..++.. .. .-+....++++++...+.+.|+.. +++.+ +.
T Consensus 305 i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~-~~a~~~~~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~ 383 (454)
T TIGR00474 305 IERLKKNPLTRALRVDKLTLAALEATLRLYLDP-EKALEKIPTLRMLTQSPEELRARAERLAKRLKAALGPGFELEIVPG 383 (454)
T ss_pred HHhhhhchhHHHHhhChHHHHHHHHHHHHHhCc-hhhhhhchHHHHhccCHHHHHHHHHHHHHHHHhhccCCceEEEEEc
Confidence 554443210 000111111 1222222221 11 112222345566777777777653 33221 10
Q ss_pred --CCCc---------eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHH
Q 014769 341 --KPEG---------SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRM 408 (419)
Q Consensus 341 --~p~~---------g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l 408 (419)
...| ++-+.++.+ + .+..++...| ++....|..- -.++.+.+.+ +..+++++..++.|
T Consensus 384 ~~~~ggg~~p~~~l~~~~v~~~~~-----~-~~~~~l~~~l-r~~~~~ii~r---~~~~~~~ld~r~~~~~~~~~~~~~~ 453 (454)
T TIGR00474 384 LSQVGGGSLPDERLPSYAVTLTPD-----G-LSAEKLEARL-RELPPPIIGR---IEDDRFLLDLRTLLEDEEELLIEAL 453 (454)
T ss_pred CCcccCCCCcCCCCCeEEEEEecC-----C-CCHHHHHHHH-hcCCCCEEEE---EECCEEEEEeCcCCHHHHHHHHHHh
Confidence 1111 222222211 1 2455665544 6656433221 1257788888 56788888877765
No 351
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.69 E-value=1.3e-15 Score=141.16 Aligned_cols=239 Identities=16% Similarity=0.188 Sum_probs=146.6
Q ss_pred CCCCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEe
Q 014769 81 ATNSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD 159 (419)
Q Consensus 81 ~~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~ 159 (419)
..+.|. .+..+..|+.+. .....++++|+|.++.+++.+++++||+|+++..+|.+....+...|+.+++++
T Consensus 62 ~~p~G~I~eAe~~aA~~fG-------Ad~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~alil~ga~Pvyi~ 134 (417)
T PF01276_consen 62 HDPEGIIKEAEELAARAFG-------ADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNALILSGAIPVYIP 134 (417)
T ss_dssp TTTBTHHHHHHHHHHHHHT-------ESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHHHHHHTEEEEEEE
T ss_pred cCCccHHHHHHHHHHHhcC-------CCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHHHHHcCCeEEEec
Confidence 334454 466666677662 134578899999999999999999999999999999999999999999998887
Q ss_pred ccCCCCc----ccCh-----HHHHHhhcC--CccE---EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-
Q 014769 160 LLPERNW----EVDL-----DAVEALADK--NTAA---MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH- 224 (419)
Q Consensus 160 ~~~~~~~----~~~~-----~~l~~~~~~--~~~~---v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~- 224 (419)
.. .+.+ .++. +.++++++. ..+. +++++|+. -|++++ +++|+++|+++++.|++||||+.
T Consensus 135 p~-~~~~gi~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~d---i~~I~~~~h~~~~~llvDEAhGah 209 (417)
T PF01276_consen 135 PE-DNEYGIIGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYD---IKEIAEICHKHGIPLLVDEAHGAH 209 (417)
T ss_dssp EE-E-TTS-BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE----HHHHHHHHCCTECEEEEE-TT-TT
T ss_pred CC-ccccCCccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEEC---HHHHHHHhcccCCEEEEEcccccc
Confidence 54 2222 3455 888888764 2344 89999887 799998 99999999999999999999975
Q ss_pred cccCCCCCCCccccCC----CCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHH
Q 014769 225 LTFGSIPYTPMGLFGS----IVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299 (419)
Q Consensus 225 ~~~~~~~~~~~~~~~~----~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a 299 (419)
+.|. ..+.+...++. +..++++.|++|. ++++. .+++-.+.... .....+.+.+... .+.+|+.+....
T Consensus 210 ~~F~-~lp~~a~~~gad~~~~~~~~vvqS~HKt--L~altQts~lh~~~~~~-v~~~~~~~~l~~~--~TTSPSY~lmAS 283 (417)
T PF01276_consen 210 FGFH-PLPRSALALGADRPNDPGIIVVQSTHKT--LPALTQTSMLHVKGDRI-VDHERVNEALSMH--QTTSPSYPLMAS 283 (417)
T ss_dssp GGCS-GGGTTCSSTTSS-CTSBEEEEEEEHHHH--SSS-TT-EEEEEETCCC-TTHHHHHHHHHHH--S-SS--HHHHHH
T ss_pred ccCC-CCccchhhccCccccccceeeeechhhc--ccccccceEEEecCCCc-ccHHHHHHHHHHH--cCCChHHHHHHH
Confidence 3444 22222222222 2357999999998 56655 45566655321 2111233333222 244666666555
Q ss_pred HHHHHcccchHHHHHHHHHHHHHHHHHHHHh---hcCCCCC
Q 014769 300 IPQILEKTKEDFFCKLIDTLRESAEICYDGV---KEIPCIS 337 (419)
Q Consensus 300 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l---~~~~~~~ 337 (419)
+..+........-++..++..++.+.+++.| .+..++.
T Consensus 284 lD~a~~~m~~~~G~~l~~~~i~~a~~~R~~i~~~~~~~~~~ 324 (417)
T PF01276_consen 284 LDVARAQMEEEEGRELLEEAIELAEEFRKKINRLNDIWGFK 324 (417)
T ss_dssp HHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHCCT-SSE
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEe
Confidence 5444333212333344444445555555555 4454554
No 352
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.69 E-value=6.3e-14 Score=140.63 Aligned_cols=310 Identities=13% Similarity=0.073 Sum_probs=198.7
Q ss_pred CCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cHHHHHHHHHHHhcC-------C-CCeEEeeCCCCCCcH
Q 014769 78 NCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GCKQAVEVILSVLAR-------P-GANVLLPRPGWPYYE 145 (419)
Q Consensus 78 ~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~~~al~~~~~~l~~-------~-gd~vlv~~p~~~~~~ 145 (419)
+.|.| .+|+.++...+.+++.+..|.. .+-+-+ +++.+...++.++.. + .++|+++.-.|....
T Consensus 530 hPyqp~e~sQG~lq~i~elq~~l~eLtGmd----~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp 605 (954)
T PRK12566 530 HPFAPREQAEGYRAMIDELEAWLCAITGFD----AICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP 605 (954)
T ss_pred CCCCchhhhcCHHHHHHHHHHHHHHHHCCC----eEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH
Confidence 46777 7899888888888888766643 344444 555555556655432 2 267788888886656
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
..+...|++++.++.++ +..+|+++|++.++ +++.+|.+++|++-++.. +.+++|+++|+++|+++++|.++
T Consensus 606 asa~~~GieVv~Vp~D~--~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e---~~V~eI~~iah~~Galv~vDgA~ 680 (954)
T PRK12566 606 ASAQMAGMRVVIVECDP--DGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYE---EGIREICEVVHQHGGQVYMDGAN 680 (954)
T ss_pred HHHHHCCCEEEEeccCC--CCCcCHHHHHHHhhccCCCEEEEEEEecCcCceec---chHHHHHHHHHHcCCEEEEEeeC
Confidence 66788899999999863 34799999999987 466677788888755443 44999999999999999999998
Q ss_pred cccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCCCccchhhHHHHHHhh------------h
Q 014769 223 GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPNGIFQKSGIIDSIKDC------------L 286 (419)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~~~~~~~~~~~~l~~~------------~ 286 (419)
..... .......++.+ ++.++++|+|+.| |.-+|.+.+.. .+...+..+ .
T Consensus 681 ~~a~~---~l~~Pg~~GAD---i~~~s~HKtf~~P~G~GGP~vG~iav~~--------~L~pfLp~~P~~d~~G~~~r~g 746 (954)
T PRK12566 681 LNAQV---GLARPADIGAD---VSHMNLHKTFCIPHGGGGPGMGPIGVRA--------HLAPFVANHPVVPVEGPDPNNG 746 (954)
T ss_pred hhhcc---CCCChhhcCCC---EEEecCCcccCcCccCCCCccchhhhhh--------hhhhhccCCCCcCCCCCCCCCC
Confidence 64221 11112345554 8888999987643 55577766654 122222211 0
Q ss_pred --ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE---EEEeecCcccccCCC
Q 014769 287 --SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM---VTMVKLNPWLLEDIN 361 (419)
Q Consensus 287 --~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~~~~~~~~~~~ 361 (419)
+.....+.....++..++.....+ +.+.......+.+++.+.|.+..++. + .+..+. -+.+.+.........
T Consensus 747 a~S~~~~gsa~~l~~A~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~~~v~-~-~~~~~~~~hEfii~~~~l~~~~g~ 823 (954)
T PRK12566 747 AVSAAPWGSASILPISWMYIAMMGPQ-LADASEVAILSANYLANQLGGAFPVL-Y-RGRNERVAHECILDLRPLKAQTGI 823 (954)
T ss_pred ceeecccchHHHHHHHHHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhhCCCC-c-CCCCCCeeeEEEEEccccccccCC
Confidence 111112222233444444443345 66666666788889999997743333 2 332222 122233211100112
Q ss_pred CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..++.++|+ ++||.... ..|-..+++|+++. .+++|||++++.|+.+.++.
T Consensus 824 ~~~dvakRL~-d~Gihapt-~~fPv~~~LmIepTE~eskeEIDrf~eAL~~I~~e~ 877 (954)
T PRK12566 824 SEEDVAKRLM-DYGFHAPT-MSFPVPGTLMVEPTESESKAELDRFVEAMLSIRAEI 877 (954)
T ss_pred CHHHHHHHHH-HCCcEEeE-EeeccCCEEEEEeeeeCCHHHHHHHHHHHHHHHHHH
Confidence 5577888886 88997644 34545789999994 68899999999999888774
No 353
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.68 E-value=1.6e-14 Score=125.04 Aligned_cols=340 Identities=16% Similarity=0.163 Sum_probs=210.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC---CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN---CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~---~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
|...+||=.+..... .-.-+|.+.+++.++.+.-.++ .|.+- ..++.+-+++++ | -+.|+-++.+.
T Consensus 58 Gk~ylDflsaysaVn-qGhchpki~~aLqeq~~kLtlssrafYnd~--~~~f~~~vt~lf----~----~~kvlpmnTGa 126 (427)
T KOG1402|consen 58 GKEYLDFLSAYSAVN-QGHCHPKIIKALQEQADKLTLSSRAFYNDV--LGEFAEYVTKLF----G----YDKVLPMNTGA 126 (427)
T ss_pred ccchhhhhhhhhhcc-cCCCCHHHHHHHHHHHhHhhhhhHHHhhhh--HHHHHHHHHHhc----C----cceeeecccch
Confidence 455566654422211 1235789999999987753221 34442 234444444443 3 45788888889
Q ss_pred HHHHHHHHHhcC--------CCC--eEEeeCCCCCCcHHHHhhcCCEEEEE----eccCCCCcc---cChHHHHHhhcCC
Q 014769 118 QAVEVILSVLAR--------PGA--NVLLPRPGWPYYEGIAQRKQVEVRHF----DLLPERNWE---VDLDAVEALADKN 180 (419)
Q Consensus 118 ~al~~~~~~l~~--------~gd--~vlv~~p~~~~~~~~~~~~g~~~~~~----~~~~~~~~~---~~~~~l~~~~~~~ 180 (419)
||.+.++....+ |.+ .|+....+|++-.-.+..++.+...+ |..|..... -|.++|+.++++.
T Consensus 127 Ea~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale~~l~~~ 206 (427)
T KOG1402|consen 127 EAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALEVALKSP 206 (427)
T ss_pred hHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccCCCCCCcceeeccCCHHHHHHHhcCC
Confidence 999999887652 322 34444555554221111121111000 000000000 1688999999876
Q ss_pred ccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
..+.+++.| +...|++ .|..++++..++|.+||+++|.||++.++...|+-.. -.+....+.+++ |.|.++..=
T Consensus 207 ~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la--~d~env~PDivi--lgKalSGG~ 282 (427)
T KOG1402|consen 207 NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLA--CDYENVRPDIVI--LGKALSGGV 282 (427)
T ss_pred CeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEE--eehhhcCCCeEE--EeccccCCe
Confidence 667788888 7778875 6778999999999999999999999999887765321 112221122332 459864433
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC---
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--- 334 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--- 334 (419)
.+++.+.+.+ +++-.++... ..+++.|+++..++.++|+-..++. ..++..+.-+.++..|.+++
T Consensus 283 ~Pvsavl~~~--------~im~~~~pgeHgsTyggNpLg~~vaiAalevi~eek---L~era~~lG~~l~~~L~~l~~~~ 351 (427)
T KOG1402|consen 283 YPVSAVLADD--------DIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVEEK---LVERAAKLGEILRDQLNKLQKKF 351 (427)
T ss_pred eeeEEEEecH--------HHHhccCCCccccccCCChHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHhccccc
Confidence 7788888765 5666665543 2356788888888877777543333 34455666677777777653
Q ss_pred -CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769 335 -CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAF 411 (419)
Q Consensus 335 -~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~ 411 (419)
.+. .....-|++.-+.+......+ .++++.+..+ ++.|++.-|-. .+-||+++ ..++++++++++.|.+.
T Consensus 352 p~~v-~~VRGrGl~~ai~i~~~~~~~-~~aw~~cl~l-k~~g~LAkptH----~~IiRfaPPL~I~e~dl~eg~e~i~k~ 424 (427)
T KOG1402|consen 352 PHVV-KEVRGRGLLNAIVINPSKTSG-QDAWDVCLAL-KENGLLAKPTH----GNIIRFAPPLVISEEDLREGIEAIEKT 424 (427)
T ss_pred cchh-heeeccceEEEEEeccccccc-hhHHHHHHcc-cccccccCCCC----CCeEEecCCcccCHHHHHHHHHHHHHH
Confidence 222 113455777777776433211 2566777665 78899877754 46899998 57999999999999987
Q ss_pred HH
Q 014769 412 CQ 413 (419)
Q Consensus 412 ~~ 413 (419)
+.
T Consensus 425 i~ 426 (427)
T KOG1402|consen 425 IA 426 (427)
T ss_pred hc
Confidence 63
No 354
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.68 E-value=2.4e-14 Score=133.03 Aligned_cols=322 Identities=14% Similarity=0.037 Sum_probs=196.0
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEeeCCCCC
Q 014769 64 AEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWP 142 (419)
Q Consensus 64 v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~~p~~~ 142 (419)
.++++.+..-.. ..+++ ...++-+.+.+.+++.++.+.+.+-++++.|+|.++++++..+. ++|++|++.. .|.
T Consensus 19 ~~~~~~~~~~~~--~HRs~--~F~~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG 93 (374)
T TIGR01365 19 SIEELKNAPLGR--SHRSK--LGKEKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG 93 (374)
T ss_pred hHHHHhhhhccc--CcCCH--HHHHHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH
Confidence 566665543221 23333 34566666666666666643333346779999999999999998 4888998764 443
Q ss_pred C-cH-HHHhhcCCE-EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 143 Y-YE-GIAQRKQVE-VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 143 ~-~~-~~~~~~g~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
. +. ++++..|.+ +..+.. +.+..+++++++. + +.|++++....||+..| ++++...+ ++.++|+|
T Consensus 94 ~r~~~eia~~~g~~~v~~l~~--~~g~~~~~~~ve~----~-~~v~~vhnETSTGv~np---v~~i~~~~--~~~lliVD 161 (374)
T TIGR01365 94 KGWVTDVTKQLKLPDVRVLEA--EYGKLPDLKKVDF----K-NDVVFTWNGTTSGVRVP---NGDFIPAD--REGLTICD 161 (374)
T ss_pred HHHHHHHHHhcCCCCcEEEcC--CCCCCCCHHHcCC----C-CCEEEecCCCchheecc---cccccccc--CCCcEEEE
Confidence 2 23 677888984 666653 3444678888763 1 23678888889999998 44544322 48999999
Q ss_pred ccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc-ch-h---hHHHHHH---------h-
Q 014769 220 EVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF-QK-S---GIIDSIK---------D- 284 (419)
Q Consensus 220 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~-~~-~---~~~~~l~---------~- 284 (419)
.+.+... ....+.. -.+++.|..|.+++|+ .++++++++..... +. . ++...+. .
T Consensus 162 avSs~g~----~~l~~d~-----iDv~~tgsQK~L~~pp-Gls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~ 231 (374)
T TIGR01365 162 ATSAAFA----QDLDYHK-----LDVVTFSWQKVLGGEG-AHGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKI 231 (374)
T ss_pred ccchhcC----CCCChhH-----CcEEEEechhccCCCC-ceEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhh
Confidence 9988632 2222221 2377788899977653 36677765421000 00 0 0000011 0
Q ss_pred h-hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CC--ceEEEEeecCcccccC
Q 014769 285 C-LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNK-PE--GSMVTMVKLNPWLLED 359 (419)
Q Consensus 285 ~-~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~--~g~~~~~~~~~~~~~~ 359 (419)
. ..+.++++....+++..+++...++ .++.+.++++++.+.+++.+++++.+..+.. +. +.....+.++......
T Consensus 232 ~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v~~~~~~~~~ 311 (374)
T TIGR01365 232 FEGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCLKVVDPAIDA 311 (374)
T ss_pred hcCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEEEeCCccccc
Confidence 0 1223455555666666666543333 6999999999999999999999832553321 11 2223334454321100
Q ss_pred CC-C-----HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHHH
Q 014769 360 IN-D-----DIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 360 ~~-~-----~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~~ 413 (419)
.. + ..++.. .++++||.+.+|..-..+..|||+. + .+.++++.+++.|.=+.+
T Consensus 312 ~~~~~~~~~~~~~~~-~l~~~gi~i~~G~~~~~~~~fRIg~~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 312 LDEDAQADFAKELIS-TLEKEGVAYDIGSYRDAPSGLRIWCGATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred cccchhhHHHHHHHH-HHHHCCEEEeccccccCCCceEEecCCcCCHHHHHHHHHHHHHHHh
Confidence 00 1 344544 4477799999887655568999998 4 689999999999875443
No 355
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.68 E-value=9.9e-14 Score=127.46 Aligned_cols=335 Identities=14% Similarity=0.069 Sum_probs=209.5
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++|+-| |+ .+|++|++++.+.+-+.. .+..++ -..++-+.+.+.+++.++++-+.+-+++..
T Consensus 4 ~~~nF~aG-Pa-----~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~--~F~~i~~~~~~~Lr~Ll~~P~~y~Vlfl~G 75 (364)
T PRK12462 4 NQLNFSGG-PG-----ALPDTVLEQVRQAVVELPETGLSVLGMSHRSS--WFSSLLAQAEADLRDLLGIPDEYGVVFLQG 75 (364)
T ss_pred ccceecCC-Cc-----CCCHHHHHHHHHHHhcccccCccccccccccH--HHHHHHHHHHHHHHHHhCCCCCCeEEEEec
Confidence 46888888 32 467888888877664421 122222 234555566666666666543334456677
Q ss_pred cHHHHHHHHHHHhcCCCCeEE-eeCCCCCC--cHHHHhhcCCEEEEEeccCCCC--cccChHHHHHhhcCCccEEEEeCC
Q 014769 115 GCKQAVEVILSVLARPGANVL-LPRPGWPY--YEGIAQRKQVEVRHFDLLPERN--WEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vl-v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
|+|.+++.+...++.+||+++ +..-++++ +...++.+| ++..+......+ ..++++.+ .+.++.+.|.+++-
T Consensus 76 ggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r~~~ea~~~g-~v~~~~~~~~~~~~~~p~~~~~--~~~~d~~~v~~t~N 152 (364)
T PRK12462 76 GSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVA-AMRVVWDGAASGYRTLPSLAEL--DWDARAPFRHYVSN 152 (364)
T ss_pred cHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHHHHHHHHhcC-CceEecCcCCCCCCcCCCHHHh--ccCCCCcEEEEccC
Confidence 799999999999999999665 44444443 345556666 444433211112 23455554 23345677888887
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
...||+.++ ++.+.++.++|+|.+.+.+. .+..+..+ .++..+..|.+|.|| ++.++.++.
T Consensus 153 ETstGv~~~--------~~~~~~~~llvvD~sS~~~s----~pid~~~~-----dvi~agsQKnlgP~G--ltvvivs~~ 213 (364)
T PRK12462 153 ETVEGLQFP--------DAAGLPDSPLIADMSSDFMS----RPFDVEAY-----GMVYAHAQKNLGPAG--VTVAIIRRA 213 (364)
T ss_pred CCCceEecC--------cccccCCCeEEEEcCchhhC----CCCChHHc-----cEEEeeccccCCCCc--eEEEEECHH
Confidence 888999886 22223689999999888632 22333333 266778899998777 677777652
Q ss_pred CC--ccc-hhhHHHHHHh--hhccccCCchHHHHHHHHHHcccchH--HHHHHHHHHHHHHHHHHHHhhcCCCCCC-CCC
Q 014769 270 NG--IFQ-KSGIIDSIKD--CLSIYSDIPTFIQGAIPQILEKTKED--FFCKLIDTLRESAEICYDGVKEIPCISC-PNK 341 (419)
Q Consensus 270 ~~--~~~-~~~~~~~l~~--~~~~~~~~~~~~~~a~~~~l~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~ 341 (419)
.. ... -|.+.+.... ..+...+|+....+++..+++...++ .++.+.++.+++.+.+++.+.+.+++.. +..
T Consensus 214 al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka~~ly~~id~~~~~~~~~~~ 293 (364)
T PRK12462 214 LLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAH 293 (364)
T ss_pred HHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCC
Confidence 10 000 0111111111 11234578888888988888876555 8999999999999999999998765441 112
Q ss_pred C--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 342 P--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 342 p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+ .+-+-+.+++++. ..+.+|.... +++|+.-..|.. .-+.+|+|+ +.+.|.++.+++-++++-+++
T Consensus 294 ~~~RS~mnv~f~~~~~-----~l~~~f~~~a-~~~gl~~lkGhr--~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~~ 363 (364)
T PRK12462 294 RAARSTMNVAFRFRQP-----RLDTLFKEQS-TEAGFCGLSGHR--SIGGIRASLYNAVSEQAVSRLCAFLKDFAIRH 363 (364)
T ss_pred hhhcCcceEEEEcCCH-----HHHHHHHHHH-HHCCCccccCCc--ccCceEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 2 2345555666532 1245665555 778998766653 356799999 578888888888777776653
No 356
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.68 E-value=1e-13 Score=140.07 Aligned_cols=347 Identities=16% Similarity=0.098 Sum_probs=206.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
..+|+..|.-........+|++.+++.+++....+ +....-..+-...+|+.|.+..+ .-..++|+++++|++|++.
T Consensus 366 ~ylD~~sg~w~~~lG~h~~p~I~~Ai~~Qa~rl~h--v~~~~~~hepa~~LAe~L~~~~~-~~~l~rVffs~sGSeAvE~ 442 (817)
T PLN02974 366 QQFDACASWWTQGPDPTLQPELARAVAYAAGRYGH--VMFPENVHEPALRAAELLLGGPG-KGWASRVFFSDNGSTAIEV 442 (817)
T ss_pred eEEEcchhHHHhCCCcCCCHHHHHHHHHHHhhCCc--cccCccCCHHHHHHHHHHHhccC-CCCCCEEEECCchHHHHHH
Confidence 67888777332211112489999999999876322 21111123555566666654111 0113689999999999999
Q ss_pred HHHHhcC-----C----------------CCeEEeeCCCCCCcHHHHhhcCCE---------E------EEEecc-----
Q 014769 123 ILSVLAR-----P----------------GANVLLPRPGWPYYEGIAQRKQVE---------V------RHFDLL----- 161 (419)
Q Consensus 123 ~~~~l~~-----~----------------gd~vlv~~p~~~~~~~~~~~~g~~---------~------~~~~~~----- 161 (419)
+++...+ . ..+|+....+|++....+...+.. . ..++..
T Consensus 443 AlKmA~r~y~~~~G~~~~~~~~~~~~~~~r~kIIa~~gsYHG~T~GAms~sg~~~~~~~~~~p~~~~~~~~~~~P~~~~~ 522 (817)
T PLN02974 443 ALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAPSVFTGFLQQPWYSGRGLFLDPPTVGMR 522 (817)
T ss_pred HHHHHHHHHHHhcCCCcccccccccccCCCCEEEEECCCcCCCCHHHHhhCCchhhhcccccccccCCCcccCCCccccc
Confidence 9886521 1 246899999998754333332210 0 001000
Q ss_pred --------CCC----------Ccc-----cC------------hHHHHHhhc-------CCccEEEEeCC--CCccccC-
Q 014769 162 --------PER----------NWE-----VD------------LDAVEALAD-------KNTAAMVIINP--GNPCGNV- 196 (419)
Q Consensus 162 --------~~~----------~~~-----~~------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~~- 196 (419)
+.. .|. ++ .+.+++.+. .+..+.+|..| +.-.|++
T Consensus 523 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~f~~~r~~~~~~~~~~~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~ 602 (817)
T PLN02974 523 NGRWNISLPEGFSSGLEGEETTWESRDEVFDKTRDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLL 602 (817)
T ss_pred cccccccCCccccccccccccccccccccccccccchhhhHHHHHHHHHHHHhhccccCCCCEEEEEEeccccCCCCccc
Confidence 000 000 00 134555553 23456677777 4666775
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccch
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~ 275 (419)
.+.++++++.++|++||+++|.||++.+|...|..+ ....++..+.++ +++|.+ ..| +++|.+++++
T Consensus 603 ~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~f-a~e~~gv~PDIi---~~gKgL-tgG~~Plaa~l~~~------- 670 (817)
T PLN02974 603 IDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVES-AWELLGCKPDIA---CYAKLL-TGGLVPLAATLATE------- 670 (817)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchh-hHHhcCCCCCEE---eecccc-cCCCCccEEEEEcH-------
Confidence 589999999999999999999999999987776543 223334333344 578994 567 6999999976
Q ss_pred hhHHHHHHh------h-hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHHHHH----HHhhcCCCCCCCCCCC
Q 014769 276 SGIIDSIKD------C-LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAEICY----DGVKEIPCISCPNKPE 343 (419)
Q Consensus 276 ~~~~~~l~~------~-~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~~l~----~~l~~~~~~~~~~~p~ 343 (419)
++.+.+.. . ...+++.++++.+++.+.|+.... +..+...+...+..+.+. +.|.++|.+.-+ ..
T Consensus 671 -~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V--Rg 747 (817)
T PLN02974 671 -EVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV--VS 747 (817)
T ss_pred -HHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE--Ee
Confidence 57776642 1 234677888888888877775432 222333333333333333 334445443312 23
Q ss_pred ceEEEEeecCcccc-cCC--CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 344 GSMVTMVKLNPWLL-EDI--NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 344 ~g~~~~~~~~~~~~-~~~--~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
-|+++-+.+..... .+. .-...+...++.++||++.|. .+.+|+.+ .+++++++++++.|.+.+
T Consensus 748 ~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~~-----Gnvi~l~pP~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 748 LGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARPL-----GNVVYLMCGPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred eeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEec-----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 46666676643110 000 012345555542789999884 25788765 578999999999998765
No 357
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.67 E-value=3.9e-13 Score=135.90 Aligned_cols=321 Identities=13% Similarity=0.048 Sum_probs=200.5
Q ss_pred CCCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--------CCCeEEeeCCCCCCcH
Q 014769 77 FNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--------PGANVLLPRPGWPYYE 145 (419)
Q Consensus 77 ~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------~gd~vlv~~p~~~~~~ 145 (419)
++.|.| .+|+.++...+.+|+.+..|++ . --+..++++.+-...+.++.. +.++|+++.-.|....
T Consensus 516 ~hPyqPe~~sqG~lq~i~elq~~l~eltGmd--~-~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP 592 (939)
T TIGR00461 516 IHPFQPSNQVEGYQELIAQLEKWLCSITGFD--A-ISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP 592 (939)
T ss_pred cCCCCchHHhHHHHHHHHHHHHHHHHHHCCC--C-cccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH
Confidence 345555 3677777777777777766655 2 223345555555544444432 2367889999998778
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
..+...|++++.++.+ .++.+|+++|++++++ ++++|++++|+| +|..-+ .+++|+++|+++|.++++|.++
T Consensus 593 asa~~~G~~Vv~V~~d--~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~--~I~eI~~iah~~G~~v~VDgAq 667 (939)
T TIGR00461 593 ASAAMAGMQVVPVNCD--QDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEP--TIQHACDIVHSFGGQVYLDGAN 667 (939)
T ss_pred HHHHHCCCEEEEeccC--CCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-Cceecc--cHHHHHHHHHHcCCEEEEEecC
Confidence 8889999999999875 3457999999999974 788899999999 677643 3899999999999999999999
Q ss_pred cccccCCCCCCCccccCCCCcEEEEecCCCcCC----CCCceeEEEEeeCCCCc-cchhhHHH---------HHHhhhcc
Q 014769 223 GHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL----VPGWRFGWLVTNDPNGI-FQKSGIID---------SIKDCLSI 288 (419)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~-~~~~~~~~---------~l~~~~~~ 288 (419)
..... .......++.| ++++|.+|+|+ ..|..+|++.++..-.. +....+.+ .++...+.
T Consensus 668 ~~al~---~l~~Pg~~GaD---i~~~s~HKtf~~P~G~GGPg~G~i~vr~~L~~~lPg~~v~~t~d~~greq~Iga~s~~ 741 (939)
T TIGR00461 668 MNAQV---GLTSPGDLGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKHDVVSMITGIGGSKSIGSVSAA 741 (939)
T ss_pred hhhCC---CCCCccccCCC---EEEecCCccCCCCCCCCCCCeEEEEEhhhchhhcCCCcccccccCCCCcccccccccc
Confidence 65211 11112334444 88889999765 34667999999752100 00000000 00000010
Q ss_pred ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE---EEEeecCcccccCCCCHHH
Q 014769 289 YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM---VTMVKLNPWLLEDINDDIE 365 (419)
Q Consensus 289 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~---~~~~~~~~~~~~~~~~~~~ 365 (419)
...+......+..++.....+.+.+..+....+.+++.+.|.+. ++.......+. -+.++++........+..+
T Consensus 742 -~~g~a~~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~~--~~~l~~~~~~~~~hEfv~~~~~~~~~~g~~~~d 818 (939)
T TIGR00461 742 -PYGSASILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKDH--YPILFVGTLKHVAHECILDLRPLKAKTGIEAID 818 (939)
T ss_pred -ccCcHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhcc--CcccccCCCCceeEEEEEeccchhhhcCCCHHH
Confidence 12222233334444444446888888888899999999999873 34232222222 1334554211111125678
Q ss_pred HHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 366 FALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 366 ~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.++| .++|+.... ..|-..+.+-|.+ ..+.++||++++.+.++-++..
T Consensus 819 IakrL-~d~G~hapt-~~~pv~g~lmiepTE~eskeelD~f~~al~~I~~e~~ 869 (939)
T TIGR00461 819 VAKRL-QDYGFHAPT-LSFPVPGTLMVEPTESESLEELDRFCDAMIAIKEEIN 869 (939)
T ss_pred HHHHH-HhCCeeccc-cCCccCCeEEEEeeccCCHHHHHHHHHHHHHHHHHHH
Confidence 88787 567997433 3343445555555 5688999999999988776654
No 358
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.63 E-value=4.5e-14 Score=125.00 Aligned_cols=341 Identities=15% Similarity=0.158 Sum_probs=220.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC------CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG------KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
+|.+++||+..+. ..+...+.+.+.....++.- .-..|+...-...+.+.||+|+ ..++-++-
T Consensus 92 ~G~~~~N~aS~Nf---L~l~~~~~ike~a~~~lrkyGvGsCGPrGFYGt~DvHldlE~~iakF~--------G~E~aivY 160 (467)
T KOG1358|consen 92 DGKDVLNFASANF---LGLIENEEIKEEASFTLRKYGVGSCGPRGFYGTIDVHLDLEKRIAKFM--------GTEDAIVY 160 (467)
T ss_pred cCceeecccchhh---hhhcccHHHHHHHHHHHHHhCCCCcCCCcccccceeecccHHHHHHhh--------CCcceeee
Confidence 4778888988873 34566788888777777652 2234777666678999999998 34566677
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------------c
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------------T 181 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------------~ 181 (419)
+-+..++..++.+++++||.|.+..-........++...-.+.++... |.+.++..+.+. +
T Consensus 161 s~gF~ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhn-------dm~~lerll~E~~~~~~K~~k~~~~ 233 (467)
T KOG1358|consen 161 SYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHN-------DMEDLERLLPEQEDEDQKNPKKALT 233 (467)
T ss_pred ccccchhhhcchhhhccCcEEEEehhhhHHHHHHHhhhhheeEEecCC-------CHHHHHHhccCcchhhhhccccccc
Confidence 777888999999999999999999988888888777777777766532 555555443221 1
Q ss_pred cEEEEeC-CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC--CCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 182 AAMVIIN-PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 182 ~~v~i~~-p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
+..+++. -.-+||.+.| +.+|+++..++...+|.||.|+....+. .+.......+..+-.++++|+.-+++..|
T Consensus 234 Rrfiv~EGl~~N~g~i~p---l~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~G 310 (467)
T KOG1358|consen 234 RRFIVVEGLYANTGDICP---LPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGG 310 (467)
T ss_pred eEEEEEEeeccCCCcccc---cHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccceeeeeecccccccccC
Confidence 2333333 3456999999 8999999999999999999999876653 33322223333334588889988876666
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
|+.+++. ... ..+++.... -++...++....++..++.. .++-.+..+.++.....+...|+...++.
T Consensus 311 ---gFc~G~~--~i~----~hQrLSg~~Y~fSAslPp~la~aa~~ai~i--~~~~p~~~~~L~~k~~~~H~~l~~~s~~~ 379 (467)
T KOG1358|consen 311 ---GFCAGKS--FIA----DHQRLSGSGYCFSASLPPYLAGAAIKAILI--EEWNPEIVQPLRAKVAKFHAALSSNSGFI 379 (467)
T ss_pred ---ceeecce--eeE----eeeeccccceeeeccCchhhhhhHHHHHHH--HhhCcchhhhhhccccccchhhhcCCceE
Confidence 7777643 111 223443322 12223333444444444443 23333455566776677777787765666
Q ss_pred CCCCCCceEEEEeecCcccccCCCC----HHHHHHHHHHhcCeEeecCCCCC------CCCeEEEEe--ecCHHHHHHHH
Q 014769 338 CPNKPEGSMVTMVKLNPWLLEDIND----DIEFALKLAKEESVIVTPGIYVG------LKNWLRIAF--CAEPSALKDGL 405 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~~~~~~~~~~~----~~~~~~~ll~~~gv~v~~g~~~~------~~~~~Ris~--~~~~~~l~~~l 405 (419)
+...|.+... .+.+..... ...+ -.+++++.+.+ ++.+.....-. .+..+||++ +.++|+++++.
T Consensus 380 v~~~~~SPi~-hl~l~~~~~-s~e~e~~lL~eivd~~i~~-~~ll~~a~~~~~~e~~~~~pSiri~~~a~~seeel~ra~ 456 (467)
T KOG1358|consen 380 VSGSPESPII-HLQLERSYG-SREKEEKLLEEIVDKCIAE-GVLLTRAKYLEKLERCPIPPSIRICVSAGMSEEELERAA 456 (467)
T ss_pred EecCcCCcee-eeeeccccc-chHHHHHHHHHHHHHHHhh-cceehhhhhhhhcccCCCCCcEEEEEeCCCCHHHHHHHH
Confidence 4545555433 344543210 0011 24566676666 88876544321 256899999 46899999999
Q ss_pred HHHHHHHHHH
Q 014769 406 GRMKAFCQRH 415 (419)
Q Consensus 406 ~~l~~~~~~~ 415 (419)
..|+++....
T Consensus 457 ~~ik~~~~~~ 466 (467)
T KOG1358|consen 457 ELIKEVASAV 466 (467)
T ss_pred HHHHHHHHhh
Confidence 9999887653
No 359
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.61 E-value=6.9e-13 Score=130.83 Aligned_cols=174 Identities=13% Similarity=0.154 Sum_probs=120.8
Q ss_pred CCCCCCCCH-HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-HhhcCCEEE
Q 014769 79 CYATNSGIP-PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVR 156 (419)
Q Consensus 79 ~Y~~~~g~~-~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~ 156 (419)
....+.|.. +..+..|+.+ | .....++++|+|.++.+++.+++.+||.|+++..+|-+.... +...|+.++
T Consensus 168 dL~~~eG~i~eAq~~AA~~f----g---Ad~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~hgaLiLsGa~PV 240 (720)
T PRK13578 168 DLLIHEGAAKDAQKHAAKVF----N---ADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV 240 (720)
T ss_pred CCCCCChHHHHHHHHHHHHh----C---CCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHHcCCeEE
Confidence 333445543 5555555555 2 134678999999999999999999999999999999998875 888999998
Q ss_pred EEeccCCCCcc----cCh-----HHHHHhhcCC----------ccEEEEeCCCCccccCCCHHHHHHHHHH-HHhCCCeE
Q 014769 157 HFDLLPERNWE----VDL-----DAVEALADKN----------TAAMVIINPGNPCGNVFTYHHLQEIAEM-ARKLRVMV 216 (419)
Q Consensus 157 ~~~~~~~~~~~----~~~-----~~l~~~~~~~----------~~~v~i~~p~nptG~~~~~~~l~~i~~~-~~~~~~~l 216 (419)
++.-.. +.++ ++. +.+++++... .++++|++|+. -|++++ +++|+++ ++.++ .|
T Consensus 241 Yl~P~~-n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~yd---i~~I~~~~~h~~~-~l 314 (720)
T PRK13578 241 YLETAR-NPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYN---ARQVVDKIGHLCD-YI 314 (720)
T ss_pred Eeeccc-cccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeec---HHHHHHHhhccCC-cE
Confidence 876432 2232 354 4477776543 36788888876 799999 8888888 67777 99
Q ss_pred EEccccccc-ccCCC--CCCCc-cccCC-CCcEEEEecCCCcCCCCCceeE-EEEee
Q 014769 217 VADEVYGHL-TFGSI--PYTPM-GLFGS-IVPVITLGSISKRWLVPGWRFG-WLVTN 267 (419)
Q Consensus 217 i~De~~~~~-~~~~~--~~~~~-~~~~~-~~~~i~~~s~sK~~~~~G~r~G-~~~~~ 267 (419)
++||||+.. .|... ..+.+ ...+. ++-++++.|.+|. ++++-.+ ++-.+
T Consensus 315 lvDEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKt--L~alTQaS~LHvk 369 (720)
T PRK13578 315 LFDSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQ--QAGFSQTSQIHKK 369 (720)
T ss_pred EEeCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhc--chhhhhHhhhhcC
Confidence 999999764 34331 12211 12333 3447999999998 5665544 44443
No 360
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.60 E-value=7.5e-13 Score=123.85 Aligned_cols=308 Identities=17% Similarity=0.148 Sum_probs=185.4
Q ss_pred hCCchhHHHHHHHHHHhhhcC----CCCCeeeccCCCCCCCCCCCChHHHH-HHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKN----DPRPVVPLGYGDPTAFPCFRTAVEAE-DAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~----~~~~~i~l~~g~~~~~~~~~~~~~v~-~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
..++.++.+++.++.+.+... ..+.+..+-.+. +.+..+. +.+...+. .....|...+...++++.+
T Consensus 13 p~~~~~~~~vl~~~~~~l~~~~~~~~~P~~~~~~~~~-------~~~~~i~~~~l~~~~n-~n~~~~~~~P~~~~~E~~v 84 (373)
T PF00282_consen 13 PEEGESLEEVLKDLREILAPGVTHWHHPRFFGFVPGG-------PSPASILADLLASALN-QNGFTWEASPAATEIEREV 84 (373)
T ss_dssp HSSHH-HHHHHHHHHHHTHGCS-TTTSTTBESSSHT---------CHHHHHHHHHHHHHT--BTTSTTTSHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHHHHHhhccCCCCCChhHhhhccCC-------ccHHHHHHHHHHhhhc-ccccccccccccccchHHH
Confidence 345556777887776655432 122332222221 2233433 33333443 3333455445678999999
Q ss_pred HHHHHhhCCCCC-----CCCcEEEcccHHHHHHHHHHHhcC--------CC-----C-eEEeeCCCCCCcHHHHhhcCCE
Q 014769 94 ADYLSRDLPYKL-----SADDVYVTLGCKQAVEVILSVLAR--------PG-----A-NVLLPRPGWPYYEGIAQRKQVE 154 (419)
Q Consensus 94 a~~l~~~~~~~~-----~~~~i~~t~g~~~al~~~~~~l~~--------~g-----d-~vlv~~p~~~~~~~~~~~~g~~ 154 (419)
.+|+.+.+|.+. +...-++|+|+|+++..++.+..+ .| + .|++.+-+|+++...+..+|+.
T Consensus 85 i~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Kaa~~lGlg 164 (373)
T PF00282_consen 85 IRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKAARILGLG 164 (373)
T ss_dssp HHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHHHHHTTSE
T ss_pred HHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHhcceeeeE
Confidence 999999888762 124568999999999888765532 12 2 4566666899999999999999
Q ss_pred EEEEeccCCCCcccChHHHHHhhcC---C--cc-EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769 155 VRHFDLLPERNWEVDLDAVEALADK---N--TA-AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~---~--~~-~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 228 (419)
++.+++++ ++.+|+++|++++.. + ++ .|+.+..+..||.+=| +++|.++|+++++|+++|.+|++..+-
T Consensus 165 ~~~I~~~~--~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~---l~~i~~i~~~~~~wlHVDaA~gg~~~~ 239 (373)
T PF00282_consen 165 VRKIPTDE--DGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDP---LEEIADICEKYNIWLHVDAAYGGSALL 239 (373)
T ss_dssp EEEE-BBT--TSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-S---HHHHHHHHHHCT-EEEEEETTGGGGGG
T ss_pred EEEecCCc--chhhhHHHhhhhhcccccccccceeeeccCCCcccccccC---HHHHhhhccccceeeeecccccccccc
Confidence 99999875 568999999887653 2 23 4555666788998866 999999999999999999999983321
Q ss_pred CCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-----------------hcccc
Q 014769 229 SIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-----------------LSIYS 290 (419)
Q Consensus 229 ~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-----------------~~~~~ 290 (419)
.+... ....+... .-|.+ +++|. +.....+|++.++++.. +...+... ...+.
T Consensus 240 ~~~~~~~~~gi~~a-dSit~-d~HK~-l~~P~~~~~~l~r~~~~------l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl 310 (373)
T PF00282_consen 240 SPEYRHLLFGIERA-DSITI-DPHKW-LGVPYGCGVLLVRDKSD------LRDAFSINADYLGNDDRESDESYDYGDYTL 310 (373)
T ss_dssp HCTTGGGGTTGGGE-SEEEE-ETTTT-TS-SSS-EEEEESSGGG------HHGGGEEEETCTT-S-SSS-GGGCEEEGSS
T ss_pred cccccccccccccc-ccccc-chhhh-hcCCccceeEEeecccc------hHHHhccChhhhcccccccccccccccccc
Confidence 11111 11112111 12433 79998 56677899999987431 11111000 01111
Q ss_pred CCch-HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769 291 DIPT-FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348 (419)
Q Consensus 291 ~~~~-~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 348 (419)
..+- .....+-..+.....+.+++..++..+..+++.+.|++.++++++..|.-+..+
T Consensus 311 ~~SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vc 369 (373)
T PF00282_consen 311 QGSRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVC 369 (373)
T ss_dssp SSSGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEE
T ss_pred cccccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEE
Confidence 1222 111222223333335788899999999999999999998888866556555443
No 361
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.59 E-value=6.5e-13 Score=130.87 Aligned_cols=306 Identities=13% Similarity=0.054 Sum_probs=177.4
Q ss_pred CCCCCCCH-HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEE
Q 014769 80 YATNSGIP-PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHF 158 (419)
Q Consensus 80 Y~~~~g~~-~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~ 158 (419)
...+.|.. +..+.+|+.+ | .....++++|+|.++.+++.+++.+||.|+++..+|-+....+...|+.++++
T Consensus 190 Ll~~~G~i~eAe~~AA~~f----g---Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~haLilsga~PVYl 262 (714)
T PRK15400 190 LLDHSGPHKEAEEYIARVF----N---ADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTHLMMMSDVTPIYF 262 (714)
T ss_pred CCCCChHHHHHHHHHHHHh----C---CCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeEEEe
Confidence 33345543 5555556555 2 12457889999999999999999999999999999999888999999999988
Q ss_pred eccCCCCc----ccC-----hHHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769 159 DLLPERNW----EVD-----LDAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (419)
Q Consensus 159 ~~~~~~~~----~~~-----~~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 224 (419)
.... +.+ .++ .+.+++++... +..+++++|+. -|.+++ +++|.++|..++ +++||||..
T Consensus 263 ~P~r-n~~Gi~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd---~~~I~~~~~~~~--ilvDEAwga 335 (714)
T PRK15400 263 RPTR-NAYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYN---TDFIKKTLDVKS--IHFDSAWVP 335 (714)
T ss_pred cccc-cccCCccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecC---HHHHHHHhCCCC--EEEEccchh
Confidence 6432 222 234 78888887642 22688888854 799999 788888888877 689999986
Q ss_pred c-ccCCCC--CCCccccC-CCCcEEEEecCCCcCCCCCceeEE-EEeeCCCCccchhhHHHHHHhhhccccCCchHHHHH
Q 014769 225 L-TFGSIP--YTPMGLFG-SIVPVITLGSISKRWLVPGWRFGW-LVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299 (419)
Q Consensus 225 ~-~~~~~~--~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a 299 (419)
. .|...- ..++.... +++-++++.|.+|. ++++..+. +-.+.. .+...+.+.+... .+++|+.+..+.
T Consensus 336 h~~F~p~~~~~sam~~ga~~~~~i~vtQStHKt--L~alTQaS~LHvkg~---vd~~~~n~a~~m~--~STSPsY~l~AS 408 (714)
T PRK15400 336 YTNFSPIYEGKCGMSGGRVEGKVIYETQSTHKL--LAAFSQASMIHVKGD---VNEETFNEAYMMH--TTTSPHYGIVAS 408 (714)
T ss_pred hhccCcccCCcChhhcCCCCCCceEEEEchhhc--ccchhHHhHHHHcCC---CCHHHHHHHHHHH--cCCCcHHHHHHH
Confidence 4 333211 12222111 12346999999998 56665444 333221 2111222223222 234555554443
Q ss_pred HH---HHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCCCC-------------c-------------
Q 014769 300 IP---QILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC------ISCPNKPE-------------G------------- 344 (419)
Q Consensus 300 ~~---~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~p~-------------~------------- 344 (419)
+. ++++. ..-++..+...+....+++.|.++++ +.++ .|+ .
T Consensus 409 LD~a~~~m~~---~~G~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~-~~~~~~~~~~w~~~p~~~whgf~~~~~~~~ 484 (714)
T PRK15400 409 TETAAAMMKG---NAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVW-QPDHIDTTECWPLRSDSTWHGFKNIDNEHM 484 (714)
T ss_pred HHHHHHHHHh---hhhHHHHHHHHHHHHHHHHHHHhCCCcccCceEEec-ChhhcccchhcccCccccccCccccccccc
Confidence 33 33332 12233334444444455555544433 3322 111 0
Q ss_pred ---eEEEEeecCccccc-----CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 345 ---SMVTMVKLNPWLLE-----DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 345 ---g~~~~~~~~~~~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
..=+++..+..... .......+. +.|+++||.+--...+ .--+-++++.++++++.+++.|.++-+
T Consensus 485 ~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~-~~L~e~gI~~E~~d~~--~iLfl~s~g~t~~~~~~L~~aL~~f~~ 558 (714)
T PRK15400 485 YLDPIKVTLLTPGMKKDGTMSDFGIPASIVA-KYLDEHGIVVEKTGPY--NLLFLFSIGIDKTKALSLLRALTDFKR 558 (714)
T ss_pred ccCCceEEEEeCCCCCCccccccCCCHHHHH-HHHHHcCCEEEecCCC--eEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 01112222210000 011234444 4458899988654421 112444557889999999998887644
No 362
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.58 E-value=1.4e-12 Score=133.47 Aligned_cols=299 Identities=14% Similarity=0.087 Sum_probs=186.0
Q ss_pred ChHHHHHHHHHHHhC-CCCCCCCCC--CC----CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCC
Q 014769 60 TAVEAEDAIVDAVRS-GKFNCYATN--SG----IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPG 131 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~-~~~~~Y~~~--~g----~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~g 131 (419)
.|+.+.+++.+.... ..++.|.+. +| +.++++.|++++ +++++++.++.++|++.+.++.++. .+|
T Consensus 117 ~P~~v~~~i~~~~~~~TaytPYqaEisQG~lqal~~~Qt~ia~Lt------G~~~anaSL~d~aTAaaea~~~a~~~~~g 190 (993)
T PLN02414 117 VPPVILRNILENPGWYTQYTPYQAEIAQGRLESLLNYQTMITDLT------GLPMSNASLLDEGTAAAEAMAMCNNILKG 190 (993)
T ss_pred CCHHHHHHHHhChHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHh------CCChhhEeecCChHHHHHHHHHHHhcccC
Confidence 556666766654331 122334431 33 456777888887 7899999999999999999887763 334
Q ss_pred --CeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHH
Q 014769 132 --ANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEI 205 (419)
Q Consensus 132 --d~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i 205 (419)
++|++++..|+.....+ +..|++++.++++.. + ...+....+++..|+ .+|.+.+ +++|
T Consensus 191 ~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~-----~------~~~~~v~~vlvq~P~-~~G~v~d---v~~I 255 (993)
T PLN02414 191 KKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF-----D------YSSGDVCGVLVQYPA-TDGEVLD---YAEF 255 (993)
T ss_pred CCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh-----c------cccCceEEEEEecCC-CCeEEcC---HHHH
Confidence 78999999999865444 456888888775321 1 111122333433444 4999988 9999
Q ss_pred HHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC---CCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769 206 AEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW---LVPGWRFGWLVTNDPNGIFQKSGIIDSI 282 (419)
Q Consensus 206 ~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~---~~~G~r~G~~~~~~~~~~~~~~~~~~~l 282 (419)
+++|+++|+++++ .++.... . ...+...++.+ |++++..|+. |..|.+.|++++++. +.+.+
T Consensus 256 ~~~ah~~GaL~iV-aad~lal-~--~l~~pge~GAD---i~vgsgqKwg~P~G~GGP~aGflavr~~--------~~r~~ 320 (993)
T PLN02414 256 VKNAHANGVKVVM-ATDLLAL-T--MLKPPGEWGAD---IVVGSAQRFGVPMGYGGPHAAFLATSQE--------YKRLM 320 (993)
T ss_pred HHHHHHcCCEEEE-EECHHHh-c--CCCCHhhccCc---EEEECCCccccCCCCCCCCeeEEEECHH--------HHhhC
Confidence 9999999999999 4433211 1 11123445554 8889999983 124666999999762 21111
Q ss_pred H---------------------hh----hccccCCchHHHHHHHHHHc-----ccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 283 K---------------------DC----LSIYSDIPTFIQGAIPQILE-----KTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 283 ~---------------------~~----~~~~~~~~~~~~~a~~~~l~-----~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
. .. +.-..+.|.-...++.+.+. ......+++..++...+..++.+.|..
T Consensus 321 PgriVG~s~d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~ 400 (993)
T PLN02414 321 PGRIIGVSVDSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKK 400 (993)
T ss_pred CCcccCcccCCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhh
Confidence 1 00 00012333322222222222 122356788888999999999999987
Q ss_pred CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHH
Q 014769 333 IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMK 409 (419)
Q Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 409 (419)
. |+++...|..+ .+.++++ +..++..+| .++||.+.... .+.+|+|+. ++++||+.+++.|.
T Consensus 401 ~-G~~~~~~~~f~-~vt~~~~--------~~~~v~~~L-~~~gI~l~~~~----~~~lrvs~~e~~T~edId~L~~~l~ 464 (993)
T PLN02414 401 L-GFQVQSLPFFD-TVKVKCS--------DADAIADAA-AKVGINLRVVD----ANTVTVSFDETTTLEDVDKLFKVFA 464 (993)
T ss_pred c-CCccCCCCCcC-eEEEecC--------CHHHHHHHH-HHCCCeeEEec----CCeEEEEeeccCCHHHHHHHHHHHc
Confidence 5 67744333222 2233443 356676666 66799775432 467999994 68999999999996
No 363
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.57 E-value=4e-12 Score=125.39 Aligned_cols=170 Identities=15% Similarity=0.098 Sum_probs=116.8
Q ss_pred CCCCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEe
Q 014769 81 ATNSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD 159 (419)
Q Consensus 81 ~~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~ 159 (419)
..+.|. .+..+.+|+.+ | .....++++|+|.++.+++.+++.+||.|+++..+|-+....+...|+.++++.
T Consensus 191 l~~~G~i~eAe~~aA~~f----g---Ad~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~aLilsga~PVYl~ 263 (713)
T PRK15399 191 LDHTGPHLEAEEYIARTF----G---AEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAHLLMMSDVVPIWLK 263 (713)
T ss_pred CCCChHHHHHHHHHHHHh----C---CCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHHHHHHcCCeeEEec
Confidence 334454 35555566655 2 124678899999999999999999999999999999998889999999999876
Q ss_pred ccCCCCc----ccCh-----HHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeE-EEcccccc
Q 014769 160 LLPERNW----EVDL-----DAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMV-VADEVYGH 224 (419)
Q Consensus 160 ~~~~~~~----~~~~-----~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~~~~ 224 (419)
-.. +.+ .++. +.+++++... ++.+++++|+. -|.+++ +++|.++| |+.+ ++||||..
T Consensus 264 P~~-n~~Gi~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd---~~~I~~~~---g~~~ilvDEAhga 335 (713)
T PRK15399 264 PTR-NALGILGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYN---TDWIKQTL---DVPSIHFDSAWVP 335 (713)
T ss_pred ccc-cccCCcCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeC---HHHHHHHh---CCCEEEEeccchh
Confidence 322 222 2344 7888877542 35788888854 899999 77777777 4555 69999986
Q ss_pred c-ccCCC--CCCCcccc-CCCCcEEEEecCCCcCCCCCceeE-EEEee
Q 014769 225 L-TFGSI--PYTPMGLF-GSIVPVITLGSISKRWLVPGWRFG-WLVTN 267 (419)
Q Consensus 225 ~-~~~~~--~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~ 267 (419)
. .|... +..++... +.+.-++++.|.+|. ++++..+ ++-.+
T Consensus 336 h~~F~p~~~~~sam~~~~~aD~~i~~tQStHKt--L~alTQaS~iHvk 381 (713)
T PRK15399 336 YTHFHPIYQGKSGMSGERVPGKVIFETQSTHKM--LAAFSQASLIHIK 381 (713)
T ss_pred hhhcCcccCCcChhhCCCCCCeeeeeeeehhcc--ccccchheeeeec
Confidence 3 33321 11222211 233345779999998 5676654 44443
No 364
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.57 E-value=5.7e-12 Score=129.69 Aligned_cols=295 Identities=14% Similarity=0.125 Sum_probs=185.6
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-C
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATN-----SGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-R 129 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~ 129 (419)
.|+.+.+.+.+. .+.++.|.|. +|. .++++.+++++ ++++.++.+..++|++.+.++.++. .
T Consensus 90 ~P~vi~~~i~~~--~~~~t~ytPyQ~EisQG~Leal~~~Qt~la~Lt------G~~~anaSl~d~aTAa~ea~~~a~~~~ 161 (954)
T PRK05367 90 TPPVILRNILEN--PAWYTAYTPYQPEISQGRLEALLNFQTMVADLT------GLEIANASLLDEATAAAEAMALAKRVS 161 (954)
T ss_pred CcHHHHHHHHhC--cchhhccCCCChHHHHHHHHHHHHHHHHHHHHH------CCChhhccccccHHHHHHHHHHhhhhc
Confidence 344454544432 1234566653 333 45566677766 7889999999999999998888863 3
Q ss_pred C--CCeEEeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 130 P--GANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 130 ~--gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
+ +++|++++..|+..... ++..|++++.++... +.+ .+++..+++.+| |.+|.+.+ ++
T Consensus 162 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~------d~~------~~~~~~vlvq~p-~~~G~i~d---~~ 225 (954)
T PRK05367 162 KSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK------ALD------HDDVFGVLLQYP-GTSGEVRD---YT 225 (954)
T ss_pred cCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc------CCC------cccEEEEEEecC-CCCeeecc---HH
Confidence 4 48999999999876543 466799988887532 111 123444555555 56999988 99
Q ss_pred HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc-----CCCCCceeEEEEeeCCCCccchhhH
Q 014769 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR-----WLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-----~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+|+++|+++|+++++|.....+.. ..+...++.+ |++++..|+ ||.| ..|++++++. +
T Consensus 226 ~i~~~ah~~Gal~~vda~~~Al~~----l~~pge~GaD---i~vgs~qkfg~P~g~GGP--~aGflavr~~--------~ 288 (954)
T PRK05367 226 ALIAAAHARGALVAVAADLLALTL----LTPPGEMGAD---IAVGSAQRFGVPMGFGGP--HAAYFAVRDA--------Y 288 (954)
T ss_pred HHHHHHHHcCCEEEEEehhhhccC----CCChhhcCCC---EEEeeCcccCCCCCCCCC--CEEEEEECHH--------H
Confidence 999999999999999875533221 1123455555 888999997 4444 4999998752 2
Q ss_pred HHHHHhh-------------------------hccccCCchHHHHHH-----HHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 279 IDSIKDC-------------------------LSIYSDIPTFIQGAI-----PQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 279 ~~~l~~~-------------------------~~~~~~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
.+.+... +.-..+.|.....++ ..++.......+++..++...+.+++.+
T Consensus 289 ~r~lpgrivG~s~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~ 368 (954)
T PRK05367 289 KRSMPGRIVGVSVDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAA 368 (954)
T ss_pred HhhCCCCeeeeecccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Confidence 2222100 000011122111111 1112222356788888999999999999
Q ss_pred HhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHH
Q 014769 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLG 406 (419)
Q Consensus 329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~ 406 (419)
.|+.. |++....+..+ .+.++++ .+..++..+| .++||.+..- .++.+|+|+ .+++++|+.+++
T Consensus 369 ~L~~~-G~~~~~~~~f~-~~~~~~~-------~~~~~i~~~l-~~~gi~~~~~----~~~~l~is~~e~~t~~did~l~~ 434 (954)
T PRK05367 369 GLRAL-GLEVVHDSFFD-TLTVEVG-------GDAAAVLARA-LAAGINLRRV----DDDHVGISLDETTTREDLAALLA 434 (954)
T ss_pred HHHhc-CcccCCCCCCC-eEEEeCC-------CCHHHHHHHH-HHCCceeccc----cCCEEEEEecccCCHHHHHHHHH
Confidence 99774 77733222112 2223332 1466777777 5679987321 156899999 468899999999
Q ss_pred HHH
Q 014769 407 RMK 409 (419)
Q Consensus 407 ~l~ 409 (419)
.+.
T Consensus 435 ~l~ 437 (954)
T PRK05367 435 VFG 437 (954)
T ss_pred HHc
Confidence 996
No 365
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.54 E-value=2e-14 Score=129.14 Aligned_cols=190 Identities=15% Similarity=0.155 Sum_probs=132.9
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCC
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p 139 (419)
++|++.+++.++.. ++- .|+......++++.+++.+ ..+..++++++|.+..++++++++|++.|++.++
T Consensus 7 ~~~~m~~a~~~a~~-gd~-~Yg~D~~~~~l~~~i~~l~--------g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~ 76 (290)
T PF01212_consen 7 PTPAMLEAMAAANV-GDD-AYGEDPTTARLEERIAELF--------GKEAALFVPSGTMANQLALRAHLRPGESVICADT 76 (290)
T ss_dssp S-HHEEHHHHHTTS-B-C-CTTSSHHHHHHHHHHHHHH--------TSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETT
T ss_pred CCHHHHHHHHcccc-CCc-ccCCChhHHHHHHHHHHHc--------CCCEEEEeCCCChHHHHHHHHHHhcCCceecccc
Confidence 57888899855443 333 6888778889999999998 3356679999999999999999999999999999
Q ss_pred CCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCc-cccCCCHHHHHHHHHHH
Q 014769 140 GWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNP-CGNVFTYHHLQEIAEMA 209 (419)
Q Consensus 140 ~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~ 209 (419)
+|.. ........|.++..++.. ++..+++++|++.+.. ++++|.|.+|+|. .|+++|.+++++|.++|
T Consensus 77 aHi~~~E~ga~~~~~G~~~~~l~~~--~~G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a 154 (290)
T PF01212_consen 77 AHIHFDETGAIEELSGAKLIPLPSD--DDGKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELA 154 (290)
T ss_dssp EHHHHSSTTHHHHHTTCEEEEEBEC--TGTBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHH
T ss_pred ceeeeeccchhhHhcCcEEEECCCc--ccCCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHH
Confidence 7752 334446688888887643 2257999999998754 4678899999985 48999999999999999
Q ss_pred HhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 210 RKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 210 ~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+++|+.++.|.+--.-.. .+.....+..+ -. ++..|++|..++++ |.+++-+
T Consensus 155 ~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~---~D-~v~~~~tK~~g~~~---Gavl~~~ 208 (290)
T PF01212_consen 155 REHGLPLHMDGARLANAAAALGVSLAEIAAG---AD-SVSFGGTKNGGAPG---GAVLAGN 208 (290)
T ss_dssp HHHT-EEEEEETTHHHHHCHHHHHHHHHHTT---SS-EEEEETTSTT-SSS---EEEEEES
T ss_pred HhCceEEEEehhhHHHhhhcccccHHHHhhh---CC-EEEEEEEccccccc---ceEEEec
Confidence 999999999987432111 01111112211 12 44448999876665 6655544
No 366
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=4.2e-13 Score=121.10 Aligned_cols=287 Identities=13% Similarity=0.142 Sum_probs=188.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (419)
.++++.+|+|+ | .++.+++.-| -+.....+.+++.||.-|+..+..|.++...++..|+.++.+.++
T Consensus 185 kelE~l~A~f~----g---~e~a~vF~mG-f~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiRVfkHN----- 251 (519)
T KOG1357|consen 185 KELEELVARFL----G---VEDAIVFSMG-FATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTRVFRHN----- 251 (519)
T ss_pred HHHHHHHHHhc----C---CcceEEEecc-ccccccCcceeecCCcceeeccccchheeccccccCceEEEEecC-----
Confidence 45666666665 2 2455555555 777777888999999999999999999999999999998887653
Q ss_pred ccChHHHHHhhcC-------C-----ccEEEEe-CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--
Q 014769 167 EVDLDAVEALADK-------N-----TAAMVII-NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP-- 231 (419)
Q Consensus 167 ~~~~~~l~~~~~~-------~-----~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~-- 231 (419)
|...|++.+++ + .+.+++. .-...-|.+.. +.+++++++++..+++.||+|+....+..+
T Consensus 252 --dm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~---Lp~vvalkkkykayl~lDEAHSiGA~g~tGrg 326 (519)
T KOG1357|consen 252 --DMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVD---LPEVVALKKKYKAYLYLDEAHSIGAMGATGRG 326 (519)
T ss_pred --CHHHHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecc---cHHHHHhhccccEEEEeeccccccccCCCCcc
Confidence 34444444321 1 1233333 33456677766 899999999999999999999987654332
Q ss_pred CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc---c-ccCCchHHHHHHHHHHccc
Q 014769 232 YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---I-YSDIPTFIQGAIPQILEKT 307 (419)
Q Consensus 232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~~~~~~~~a~~~~l~~~ 307 (419)
.-.+...+..+..|.+++|.|+++.+| ||+.+++ ++++.++.... + +..+++++|..+. .++..
T Consensus 327 vce~~g~d~~dvDImMGtftKSfga~G---Gyiagsk--------~lid~lrt~s~~~~yat~~sppvaqq~~s-sl~~i 394 (519)
T KOG1357|consen 327 VCEYFGVDPEDVDIMMGTFTKSFGAAG---GYIAGSK--------ELIDYLRTPSPSALYATSLSPPVAQQILT-SVKHI 394 (519)
T ss_pred eeeccCCCchhheeecceehhhccccc---ceecCcH--------HHHhhhccCCCceeecccCChHHHHHHHH-HHHhh
Confidence 222333344445699999999999998 9999976 68888876532 1 1223344444333 22221
Q ss_pred ----chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceE--EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769 308 ----KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSM--VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 308 ----~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~--~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
..+..++..+++.++..+++..|+.. ++.+. ...... -+.+-.+. ....+-..+++ +++.+...
T Consensus 395 ~G~dgt~~g~~k~~~l~~ns~yfr~~l~~~-gfivy-G~~dSpVvplll~~~~-------k~~~f~r~~l~-~nigvVvv 464 (519)
T KOG1357|consen 395 MGEDGTNRGRQKIERLAENSRYFRWELQKM-GFIVY-GNNDSPVVPLLLYGPA-------KIVAFSREMLE-RNIGVVVV 464 (519)
T ss_pred cCCCcccHHHHHHHHHHhhhHHHHHhhhcC-cEEEe-cCCCCCcceeeecCcc-------cccHHHHHHHh-cCceEEEE
Confidence 24567778889999999999999886 65522 333221 11221221 23455556655 46766555
Q ss_pred CCCCC---CCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 382 IYVGL---KNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 382 ~~~~~---~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
.+... ....|++. ..+.|+++.+++.+.+.=.
T Consensus 465 gfPatpl~e~r~R~c~Sa~ht~e~ld~~l~~i~~~g~ 501 (519)
T KOG1357|consen 465 GFPATPLLESRARFCLSASHTKEDLDRALEVIDRVGD 501 (519)
T ss_pred eCCCchHHHhHHHhhhcccccHHHHHHHHHHHhhhch
Confidence 44432 35678887 3578999999998887643
No 367
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.54 E-value=1.8e-11 Score=113.18 Aligned_cols=339 Identities=16% Similarity=0.176 Sum_probs=207.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
..-+|||-.-.-+ .-+.+...++|.. ++ ..|+.+..+.+|++.+++++ .-+.++.|+.++.+-
T Consensus 40 ~dV~IDLrSDTgT----~apS~~m~aAM~~----GD-D~Y~gdpSv~~Lee~vael~--------G~E~alpthqGRgaE 102 (467)
T TIGR02617 40 EDVFIDLLTDSGT----GAVTQSMQAAMMR----GD-EAYSGSRSYYALAESVKNIF--------GYQYTIPTHQGRGAE 102 (467)
T ss_pred CCeEEECccCCCC----CCCCHHHHHHHHc----CC-cccccCchHHHHHHHHHHHh--------CCceEEECCCCchHH
Confidence 3446777665432 1245666676654 33 25887778899999999998 235688899999999
Q ss_pred HHHHHHhcC-CCCeEEeeCC-------CCCC-cHHHHhhcCCEEEEEecc--------CCCCcccChHHHHHhhcCC---
Q 014769 121 EVILSVLAR-PGANVLLPRP-------GWPY-YEGIAQRKQVEVRHFDLL--------PERNWEVDLDAVEALADKN--- 180 (419)
Q Consensus 121 ~~~~~~l~~-~gd~vlv~~p-------~~~~-~~~~~~~~g~~~~~~~~~--------~~~~~~~~~~~l~~~~~~~--- 180 (419)
.+++..+++ ||+.+++..+ .|+. ....+...|+.+..+..+ ......+|++.+++++++.
T Consensus 103 ~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett~g~a~l~G~~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~ 182 (467)
T TIGR02617 103 QIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPN 182 (467)
T ss_pred HHHHHhhcccccccccccccccccceEEEEecchHHHHHcCceeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCCC
Confidence 999999988 6787775443 2222 234567778776665321 1223478999999998741
Q ss_pred -ccEEE--EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc----------ccCCCCCCCcc-c-cCCCCcEE
Q 014769 181 -TAAMV--IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL----------TFGSIPYTPMG-L-FGSIVPVI 245 (419)
Q Consensus 181 -~~~v~--i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~----------~~~~~~~~~~~-~-~~~~~~~i 245 (419)
...+. +++ |.-.|+++|.+.++++.++|++||+.++.|.+--.- .+.+.+...+. . +... . .
T Consensus 183 ~i~~v~~tlt~-N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~a-D-s 259 (467)
T TIGR02617 183 NVPYIVATITC-NSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYA-D-M 259 (467)
T ss_pred CceeeeeeEEE-ecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccC-C-E
Confidence 11221 221 334689999999999999999999999999864321 12222221111 0 0111 1 3
Q ss_pred EEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhh------ccccCCchHHHHHHHHHHcccc-hHHHHHHHH
Q 014769 246 TLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCL------SIYSDIPTFIQGAIPQILEKTK-EDFFCKLID 317 (419)
Q Consensus 246 ~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~ 317 (419)
+.-|+||.++.| | |+++++++ .++ ++.++.+... .++++.+.-...|++.-|.+.. .+++..+..
T Consensus 260 vt~slsKglgApvG---g~Lag~d~-~~~---~l~~~~~~~~i~~EGf~tYGGlagrd~ea~a~Gl~e~~~~~yl~~ri~ 332 (467)
T TIGR02617 260 LAMSAKKDAMVPMG---GLLCFKDD-SFF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMNLDWLAYRIN 332 (467)
T ss_pred EEEEcCCCCCCccc---ceEEecch-hHH---HHHHHHHhhcccccCCcCcCchhHHHHHHHHhhhhhcccHHHHHHHHH
Confidence 445899997666 4 55555542 111 3444444431 1234445555556665565533 566666665
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc----ccccCCCCHHHHHHHHHHhcCeEee-cCCCC-CC-----
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP----WLLEDINDDIEFALKLAKEESVIVT-PGIYV-GL----- 386 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~----~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~-~~----- 386 (419)
+++ +|.+.|.+. |+.++ . .||.-++++... ... ..-....++.+|..+.||.-. -|+.. +.
T Consensus 333 qv~----yl~~~L~~~-Gvpi~-~-~Gghav~iDa~~~lphip~-~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~ 404 (467)
T TIGR02617 333 QVQ----YLVNGLEEI-GVVCQ-Q-AGGHAAFVDAGKLLPHIPA-DQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTG 404 (467)
T ss_pred HHH----HHHHHHHhC-CCcEE-e-cCccEEEEehhhhCCCCCh-hhCcHHHHHHHHHHHcCcceEeecceecccCCCCC
Confidence 555 455555554 77744 5 667666654321 111 112467888899899999633 23321 11
Q ss_pred ------CCeEEEEee---cCHHHHHHHHHHHHHHHHH
Q 014769 387 ------KNWLRIAFC---AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 387 ------~~~~Ris~~---~~~~~l~~~l~~l~~~~~~ 414 (419)
-..+|+++- .+.+.++...+.+..+.++
T Consensus 405 ~~~~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 405 KQLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccCCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 146999993 4889999999999887754
No 368
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.51 E-value=2e-11 Score=115.67 Aligned_cols=304 Identities=14% Similarity=0.084 Sum_probs=180.9
Q ss_pred CCCCC-HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769 82 TNSGI-PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160 (419)
Q Consensus 82 ~~~g~-~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~ 160 (419)
++.|. .+..+..|+.+. .....++++|++.++..+..+++.+||.|+++.++|-+....+...|+.++++.-
T Consensus 67 ~p~G~i~eAqe~aA~~fg-------Ad~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p 139 (557)
T COG1982 67 DPEGPIKEAQELAARVFG-------ADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEP 139 (557)
T ss_pred CCCccHHHHHHHHHHHhC-------CCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHHHHHcCCceEEecC
Confidence 34554 355555565552 1236899999999999999999999999999999999998889999999888764
Q ss_pred cCCCC----cccChHHHHHhhcC--Cc-cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769 161 LPERN----WEVDLDAVEALADK--NT-AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 161 ~~~~~----~~~~~~~l~~~~~~--~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 233 (419)
..+.. .+++.+.+.+++.. .. +.+++++|+. -|++++ +++|.+.+...++|+.+|+++....--....+
T Consensus 140 ~~np~~gi~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n---~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~ 215 (557)
T COG1982 140 SRNPLYGIIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYN---LRKIVELLHHYGAWVLYDEAHPAHFDFSPMLP 215 (557)
T ss_pred CCCccccccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeec---HHHHHHHHhhcCceEEhhhcCcccccccccCc
Confidence 33221 35788998886644 23 6778888776 799999 88899999999999999999875321111111
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHH--HH-ccc
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQ--IL-EKT 307 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~--~l-~~~ 307 (419)
. .-...+.++++.|.+|. ++++. .+++-+++. ... -.++++.... .+.+|+.+..+.+.. .+ ...
T Consensus 216 ~--~~~~~~~~~~tqS~HK~--l~alSQaS~iHv~~~-~~~----~~~r~nea~~~h~STSPsY~l~ASlD~Ar~~~~~~ 286 (557)
T COG1982 216 E--SALNGGADFVTQSTHKL--LAALSQASMIHVKDG-RAV----NHERFNEALMMHQSTSPSYPLMASLDVARMQEGNA 286 (557)
T ss_pred c--hhhhcCceEEEechhhh--hhhhhhhHHHhhCCC-ccC----CHHHHHHHHHHHccCCchHHHHHHHHHHHHhhhhh
Confidence 1 11123457999999998 45544 444554431 122 1233443322 233444444333322 11 111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--------------------ceEEEEeecCcccccCCCCHHHHH
Q 014769 308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--------------------GSMVTMVKLNPWLLEDINDDIEFA 367 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--------------------~g~~~~~~~~~~~~~~~~~~~~~~ 367 (419)
.....++..+..-+.++.+++.+.+++++.++.++. +..=+.+..|.. |. .+..+.
T Consensus 287 G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~---Gi-pg~~v~ 362 (557)
T COG1982 287 GRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEF---GI-PGAIVA 362 (557)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccccCCcccccccccccccceeccccEEEEecCCC---CC-cHHHHH
Confidence 123344445666667777777777766666443332 111222333322 22 455665
Q ss_pred HHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 368 LKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 368 ~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
..| +++|+...-...+ ..-+-++++. .+....++.|.++.+.
T Consensus 363 ~~L-~e~gii~e~~~d~--~~lll~~~~~--gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 363 KYL-REHGIIPEETGDY--SNLLLFSPGI--GKWQTLVDRLLEFKRR 404 (557)
T ss_pred HHH-HHcCCeeeecCCc--eeeEEeeecc--chHHHHHHHHHHHHHh
Confidence 555 7778876543321 1122233332 4555555556555553
No 369
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.50 E-value=2.2e-13 Score=126.32 Aligned_cols=272 Identities=18% Similarity=0.162 Sum_probs=162.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|.-+.. .-.-+|.+.+++.+++..... ........+....+++.+.+..+ -..+++++++++++
T Consensus 13 ~dG~~~lD~~~~~~~~~-lGh~~p~i~~ai~~~~~~~~~--~~~~~~~~~~~~~la~~L~~~~p--~~~~~v~f~~sGse 87 (339)
T PF00202_consen 13 VDGREYLDFMSGYGSVN-LGHNHPEIAEAIAEQANKLNY--VSFSGFTHPEAAELAEKLAELFP--GGLDRVFFANSGSE 87 (339)
T ss_dssp TTSEEEEESSHHHHTTT-T-BT-HHHHHHHHHHHHHCSS--CSTTTSEEHHHHHHHHHHHHHSS--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCCCcccee-cCCCccccchhHHHHhhhccc--ccccceeccchhhhhhhhhhccc--cccceeeeccCchH
Confidence 35888999987733321 122568999999998876432 12122334566677777766553 25579999999999
Q ss_pred HHHHHHHHhc------C-C-CCeEEeeCCCCCCcHHHHhhcC-------------CEEEEEeccCCCC---cccChHHHH
Q 014769 119 AVEVILSVLA------R-P-GANVLLPRPGWPYYEGIAQRKQ-------------VEVRHFDLLPERN---WEVDLDAVE 174 (419)
Q Consensus 119 al~~~~~~l~------~-~-gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~---~~~~~~~l~ 174 (419)
|++.+++... . + -.+|+....+|++....+...+ ..+..+|.+.... .....+.++
T Consensus 88 Ave~Alkla~~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 167 (339)
T PF00202_consen 88 AVEAALKLARQYHNKRAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALE 167 (339)
T ss_dssp HHHHHHHHHHHHHHHTHHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccccccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHH
Confidence 9999999876 2 2 3789999999987543332221 1223344321100 000011122
Q ss_pred H---hhcCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEec
Q 014769 175 A---LADKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGS 249 (419)
Q Consensus 175 ~---~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s 249 (419)
+ ....+..+.+|..| +...|. ..+.+.+++|.++|+++|+++|+||++.++...|..+ ....++..+.++ +
T Consensus 168 ~~~~~~~~~~iaavivEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~-a~~~~gv~PDiv---~ 243 (339)
T PF00202_consen 168 ELIAALNADEIAAVIVEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFF-ASEHYGVDPDIV---T 243 (339)
T ss_dssp HHHHHHHGGGEEEEEEESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSS-GHHHHTSSSSEE---E
T ss_pred HHHHhhcCCcEEEEEEeccccccCccccccchhhehcccccccccceecccccccccccCCcc-ceecccccCccc---c
Confidence 2 22233445666677 444454 5688899999999999999999999999987666533 233344444445 4
Q ss_pred CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 250 ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 250 ~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
++|.+ ..|+++|.+++++ ++.+.+.... ..++..++++..++.+.|+....+. ..++++++.+++.+
T Consensus 244 ~gK~l-~gG~p~sav~~~~--------~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~~~~~---~~~~~~~~g~~l~~ 311 (339)
T PF00202_consen 244 FGKGL-GGGLPISAVLGSE--------EIMEAFQPGSHGSTFGGNPLSCAAALATLEILEEED---LLERVRELGERLRE 311 (339)
T ss_dssp EEGGG-GTTSSEEEEEEEH--------HHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHHHHTT---HHHHHHHHHHHHHH
T ss_pred cccch-hhhhhcccccccc--------hhhccccccccccccccchHhhhhhhhHHHhhccHH---HHHHHHHHHHHHHH
Confidence 56995 4569999999976 4555553332 3356678888888888777633221 23334444444444
Q ss_pred Hhh
Q 014769 329 GVK 331 (419)
Q Consensus 329 ~l~ 331 (419)
.|+
T Consensus 312 ~L~ 314 (339)
T PF00202_consen 312 GLR 314 (339)
T ss_dssp HHH
T ss_pred HHH
Confidence 444
No 370
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=99.42 E-value=4.2e-11 Score=102.75 Aligned_cols=362 Identities=10% Similarity=0.022 Sum_probs=213.9
Q ss_pred HHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCC
Q 014769 26 KTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL 105 (419)
Q Consensus 26 ~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~ 105 (419)
..|.....+.+...++...+|-=.+.... -.-+|++.++...++..-.. ...-+...+.++.++....-.
T Consensus 31 ~kivRaq~QYmfDE~g~~yLDCInNVaHv---ghchp~VV~A~~kQmat~~t-------N~RFlhd~lv~cA~~l~stlP 100 (452)
T KOG1403|consen 31 LKIVRAQGQYMFDEEGTRYLDCINNVAHV---GHCHPEVVRAGAKQMATIST-------NNRFLHDELVQCARTLTSTLP 100 (452)
T ss_pred hhhehhccceeeccCcccHHHHhhhhhhc---ccCCHHHHHHHHHHHhHhcc-------cchhhHHHHHHHHHHHhhcCC
Confidence 34444334444344455555422222221 23578888888888754221 123445555555444333233
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-------C--C-EEEEEeccCCC-----Ccc-
Q 014769 106 SADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-------Q--V-EVRHFDLLPER-----NWE- 167 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-------g--~-~~~~~~~~~~~-----~~~- 167 (419)
.-+-+++++++++|..++++...+ +..-|++.+..|+++....... | . ++.++.+-|.. .+.
T Consensus 101 eLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~ 180 (452)
T KOG1403|consen 101 ELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRD 180 (452)
T ss_pred CceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCcccccccccc
Confidence 456789999999999999988653 2344555666676543222111 1 1 12223221110 000
Q ss_pred ----------cChHHHHHhh----cCCc-cEEEEe-CCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769 168 ----------VDLDAVEALA----DKNT-AAMVII-NPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI 230 (419)
Q Consensus 168 ----------~~~~~l~~~~----~~~~-~~v~i~-~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 230 (419)
.-.+.+++.+ .... .+.++. .-++-.|++ .|..+.+..++..+.+|.+.|.||++.+|..-|.
T Consensus 181 ~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGFGRvG~ 260 (452)
T KOG1403|consen 181 KMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGFGRVGS 260 (452)
T ss_pred ccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcccccch
Confidence 0112222222 2121 222333 335667775 5677899999999999999999999999887788
Q ss_pred CCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHccc
Q 014769 231 PYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKT 307 (419)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~ 307 (419)
.++.+..++-.+.++ ++.|. ...|.+++.+++.. ++.+++.... ..+++.|+.+.++..++|...
T Consensus 261 hyWafq~y~fiPDIV---tmgKp-mGNGhPVa~Vattk--------eIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~ 328 (452)
T KOG1403|consen 261 HYWAFQTYNFIPDIV---TMGKP-MGNGHPVAAVATTK--------EIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVC 328 (452)
T ss_pred hhhhhhhhccccchh---eeccc-CCCCCeeeEEeccH--------HHHHHhccccceehhccCCCchhHHHHHHHHHHH
Confidence 877777666443344 56799 67899999999865 6888887631 125677888888888888765
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-CCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769 308 KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-PEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
..+.+.++..++.+..+.+...++. ..+|+.. ..-|.|+-+++-.... +....+...+.+|-+.++|+++....
T Consensus 329 e~E~Lq~ha~~vG~~L~~lL~~~k~--kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDGP 406 (452)
T KOG1403|consen 329 EDENLQEHAQQVGEKLEVLLRRLKQ--KHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADGP 406 (452)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhh--hccceeccccceEEEeeeeecccccCCCcHHHHHHHHHHHHHhhhEEEecCCC
Confidence 5677777777777766666666654 2233322 2347777666522110 11112445667776778898865322
Q ss_pred CCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 384 VGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 384 ~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
.++.+.|-+ +.++++.++.+..|.+++.
T Consensus 407 --h~NilKiKPPmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 407 --HRNILKIKPPMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred --CCceeecCCCcccChhhHHHHHHHHHHHHH
Confidence 134556654 6788888888888887775
No 371
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.41 E-value=2.4e-09 Score=105.07 Aligned_cols=292 Identities=15% Similarity=0.107 Sum_probs=175.0
Q ss_pred hhHHHHHHHHHHhhhcCCCCCeeeccC-C-CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhh
Q 014769 23 VTVKTSLASIIDSVNKNDPRPVVPLGY-G-DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD 100 (419)
Q Consensus 23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~-g-~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~ 100 (419)
.....+++++.+.+.++ .+.+.. | .-...+..+..+.+...+...+-+.....|..+++...+++.+.+++.+.
T Consensus 60 ~~~~~~l~~l~~~l~~~----sv~~~~P~ry~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l 135 (608)
T TIGR03811 60 NNMKDVLDELSSRLRTE----SVPWHSAGRYWGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATL 135 (608)
T ss_pred cCHHHHHHHHHHHHhcC----CCCCCCccceEEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHH
Confidence 35677777777666332 112111 0 00001122345666655555555544445555567889999999999998
Q ss_pred CCCCCCCCcEEEcccHHHHHHHHHHHhcCC--------------------------------------------------
Q 014769 101 LPYKLSADDVYVTLGCKQAVEVILSVLARP-------------------------------------------------- 130 (419)
Q Consensus 101 ~~~~~~~~~i~~t~g~~~al~~~~~~l~~~-------------------------------------------------- 130 (419)
.|.+. ..=.||+|||.|+..++...++.
T Consensus 136 ~G~~~--~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~ 213 (608)
T TIGR03811 136 MGYKN--GWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSA 213 (608)
T ss_pred hCCCC--CCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhcc
Confidence 88753 33457888888877655543210
Q ss_pred --C------CeEEeeCCCCCCcHHHHhhcCCE---EEEEeccCCCCcccChHHHHHhhcC----C-cc-EEEEeCCCCcc
Q 014769 131 --G------ANVLLPRPGWPYYEGIAQRKQVE---VRHFDLLPERNWEVDLDAVEALADK----N-TA-AMVIINPGNPC 193 (419)
Q Consensus 131 --g------d~vlv~~p~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~----~-~~-~v~i~~p~npt 193 (419)
| .+++++.-.|+++...+..+|+. ++.+|++ .++++|++.|++.+++ + +. +|+.+-.+..+
T Consensus 214 ~~g~~~~~~~~vl~s~~aHyS~~KAa~ilGlG~~~vv~VpvD--~~~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~ 291 (608)
T TIGR03811 214 RSGKDLQKLGKWLVPQTKHYSWLKAADIIGIGLDQVIPVPVD--SNYRMDINELEKIIRKLAAEKTPILGVVGVVGSTEE 291 (608)
T ss_pred ccccccccceEEEECCCccHHHHHHHHHcCCCcccEEEeecC--CCCcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCC
Confidence 0 05777787899999999999985 7778775 4578999999887753 2 22 34556667889
Q ss_pred ccCCCHHHHHHHHHHHHhCCC--eEEEcccccccc---cCCC--CCCC----------------------------cccc
Q 014769 194 GNVFTYHHLQEIAEMARKLRV--MVVADEVYGHLT---FGSI--PYTP----------------------------MGLF 238 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~--~li~De~~~~~~---~~~~--~~~~----------------------------~~~~ 238 (419)
|.+=|.+++.+|++.++++|+ ++++|.+|+++. +-.. .+.+ +..+
T Consensus 292 GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gl 371 (608)
T TIGR03811 292 GAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAI 371 (608)
T ss_pred cccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcC
Confidence 999885555555544478888 699999999853 1110 0000 0111
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc---------------cccCCch-----HHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---------------IYSDIPT-----FIQG 298 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---------------~~~~~~~-----~~~~ 298 (419)
... .-|++ .++|. +.-...+|.++.++.. +.+.+..... +....+. +..+
T Consensus 372 e~A-DSItv-DpHK~-g~~Py~~G~ll~Rd~~-------~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga~AlklW 441 (608)
T TIGR03811 372 SEA-ESVTI-DPHKM-GYIPYSAGGIVIQDIR-------MRDVISYFATYVFEKGADIPALLGAYILEGSKAGATAASVW 441 (608)
T ss_pred cCc-eEEEe-Ccccc-cccCCCeEEEEEeCHH-------HHHHHhcCcchhccccccCcccccccceecCCccHHHHHHH
Confidence 111 12433 79998 6777889999988742 2222211110 0111121 2222
Q ss_pred HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 299 AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 299 a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
++.+.+.. ..+.+.++.++..+.++++.+.|.++
T Consensus 442 ~~lr~l~~-G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 442 AAHKVLPL-NVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHhc-CHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 22222211 35678888888889999999988773
No 372
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.40 E-value=4.7e-10 Score=99.03 Aligned_cols=360 Identities=12% Similarity=0.072 Sum_probs=213.4
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC------CCCCCCCCHHHHHHH
Q 014769 20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN------CYATNSGIPPARRAI 93 (419)
Q Consensus 20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~------~Y~~~~g~~~lr~~i 93 (419)
.....+.+|++.-.++. ..+-.+| -.. + -.+.++.+++-..+.+.... .|+..+-+.+++...
T Consensus 23 ~~DPev~~ii~~Ek~RQ--~~gieLI---aSE-----N-Fts~aVmeAlGS~ltNKYSEGyPG~RYYGGne~ID~iE~LC 91 (477)
T KOG2467|consen 23 EVDPEVHDIIEKEKERQ--KRGIELI---ASE-----N-FTSRAVMEALGSCLTNKYSEGYPGARYYGGNEYIDQIELLC 91 (477)
T ss_pred hcChHHHHHHHHHHHhh--hcceeEe---ecc-----c-chHHHHHHHHhHHhhcccccCCCcccccCcchHHHHHHHHH
Confidence 34567788887544332 1233333 221 1 24567777777666553222 344333333333333
Q ss_pred HHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEee---CCCCCCcHHHH--hhcC-----CEEEEEeccC
Q 014769 94 ADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLP---RPGWPYYEGIA--QRKQ-----VEVRHFDLLP 162 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~---~p~~~~~~~~~--~~~g-----~~~~~~~~~~ 162 (419)
.+.-.+-++.....-.| +-.-+++-|++.+..+++.|+++|.-. +.+|-.+.... +... ++-.++.+++
T Consensus 92 q~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~ 171 (477)
T KOG2467|consen 92 QKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDP 171 (477)
T ss_pred HHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccccCCceeeeeeeecccCceeeCC
Confidence 33332333332222233 234466788889999999999999844 33443322111 1111 1222344555
Q ss_pred CCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCC
Q 014769 163 ERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGS 240 (419)
Q Consensus 163 ~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~ 240 (419)
..+ -+|.|.|++.... ++++ +|+..+. -...++ -.++.++|.+.|.+++.|.+|-- +.-.+.-+.|+. +
T Consensus 172 ~TG-~IDYD~Le~~A~~frPk~-iiaG~Sa-Y~R~~D---YaR~R~Iad~~gA~Lm~DMAHISgLVAA~vipsPFe-y-- 242 (477)
T KOG2467|consen 172 STG-YIDYDKLEKTATLFRPKL-IIAGTSA-YSRLID---YARFRKIADKVGAYLMADMAHISGLVAAGVIPSPFE-Y-- 242 (477)
T ss_pred CCC-ceehHHHHHHHHhcCCcE-EEecccc-chhhcc---HHHHHHHHHhcCceeehhhhhHHHHHhcccCCCccc-c--
Confidence 443 5899999886554 3444 4443221 223344 57777888899999999999954 333333333322 1
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCC---------C-ccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccc
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPN---------G-IFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~---------~-~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~ 308 (419)
..|+..+.+|+ +.|.|.|.+..+.-- . .+ ++-+++.... .+-++|......+++.+|.+-.
T Consensus 243 --~DiVTTTTHKs--LRGPRg~mIFyRkGvk~~~~k~g~~i~y---dlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~ 315 (477)
T KOG2467|consen 243 --CDIVTTTTHKS--LRGPRGAMIFYRKGVKSIKPKQGKEILY---DLEDKINFAVFPGLQGGPHNHTIAALAVALKQAM 315 (477)
T ss_pred --cceeecccccc--ccCCcceeEEEeccCCcCCCCCCCccee---chhhhhhhhccccccCCCCcchHHHHHHHHHhhC
Confidence 23888899997 789999998876511 1 22 3445555432 3345666667777777887766
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-- 386 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-- 386 (419)
...+.+...++.++...+.+.|.+. |...+........+++++..... +-..+++.++..+|.+.--..++.
T Consensus 316 tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G~-----dGarvE~vle~~~I~~NKNtvpGD~S 389 (477)
T KOG2467|consen 316 TPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKGV-----DGARVEKVLELCHIALNKNTVPGDKS 389 (477)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccCC-----chHHHHHHHHHhhhhhcCCcCCCCcc
Confidence 6677888889999999999999988 77756555556677777765432 334457777777887654444443
Q ss_pred ---CCeEEEEe-e-----cCHHHHHHHHHHHHHHH
Q 014769 387 ---KNWLRIAF-C-----AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 387 ---~~~~Ris~-~-----~~~~~l~~~l~~l~~~~ 412 (419)
++.+||.. + ..++|+++..+-|.+++
T Consensus 390 al~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av 424 (477)
T KOG2467|consen 390 ALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAV 424 (477)
T ss_pred ccCCCceeccchhhcccCccHHHHHHHHHHHHHHH
Confidence 68899987 2 24688888777777665
No 373
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=99.37 E-value=8.6e-12 Score=100.53 Aligned_cols=119 Identities=21% Similarity=0.348 Sum_probs=85.1
Q ss_pred hCCchhHHHHHHHHHHh-hhc-CCCCCeeeccCCCCC-------------CCCCCCChHHHHHHHHHHHhCCCCCCCCCC
Q 014769 19 AAPAVTVKTSLASIIDS-VNK-NDPRPVVPLGYGDPT-------------AFPCFRTAVEAEDAIVDAVRSGKFNCYATN 83 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~-~~~-~~~~~~i~l~~g~~~-------------~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~ 83 (419)
-.+.+.....-+...++ +.. ..+..+|+|+..... ..+.+..++.+++++.+. ..|.+.
T Consensus 18 ~~~~~~~~~~~~~~~~~~y~~~~np~G~I~lg~aEN~l~~dli~~~i~~~p~~d~~~~~~i~~~~~~~------a~Y~~~ 91 (153)
T PLN02994 18 HGEASPYFAGWKAYDLNPFDLLHNPQGIIQMGLAENQLCSDLIEEWIEENPHADICTAEGTIDSFKDI------ALFQDY 91 (153)
T ss_pred CCCCchHHHHHHHHhcCCCCcccCCCceEeeehhhhHhHHHHHHHHHhCCCccccCCcHHHHHHHHHH------hcCCCC
Confidence 34445555544433332 211 224458888776321 012344445545555442 248889
Q ss_pred CCCHHHHHHHHHHHHhhCC--CCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 84 SGIPPARRAIADYLSRDLP--YKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~--~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.|.++||+++++|+.+.+| ..+++++|++|+|++++++.++.+++++||.|++++|+|++
T Consensus 92 ~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 92 HGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred CCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 9999999999999999888 67889999999999999999999999999999999999974
No 374
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.34 E-value=1.8e-09 Score=98.54 Aligned_cols=314 Identities=14% Similarity=0.128 Sum_probs=197.7
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc----C-CC---CeEEeeCCCCCCcHHHHhhcCCEE
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA----R-PG---ANVLLPRPGWPYYEGIAQRKQVEV 155 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~----~-~g---d~vlv~~p~~~~~~~~~~~~g~~~ 155 (419)
.+...+..++.+++...++.+ ....=..|.|+|+++........ . +| ..++++...+-.+...+...++.+
T Consensus 116 p~~~~~e~~~Vnm~~~L~~~~-~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~~a~eK~a~yf~v~l 194 (491)
T KOG1383|consen 116 PVVRKLEAECVNMIANLFNAP-SDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVHAAFEKAARYFEVEL 194 (491)
T ss_pred chhHHHHHHHHHHHHHHhcCC-ccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHHHHHHHHHhhEEEEE
Confidence 466788888888888866655 22333678888998555544431 1 22 345666666777788888889999
Q ss_pred EEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh-CCCeEEEcccccccccC-CCCCC
Q 014769 156 RHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFG-SIPYT 233 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~-~~~~~ 233 (419)
..+++++ .++.+|+..+.+.+++++..++..-|+.|+|..=+ +++|.++..+ +++.+.+|.+-+.|... +....
T Consensus 195 ~~V~~~~-~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~---ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~ 270 (491)
T KOG1383|consen 195 REVPLDE-GDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIED---VEKLADLLLEIWDIPIHVDACLGGFINPAGYLNE 270 (491)
T ss_pred Eeeeccc-cceEecHHHHHHHhccceEEEEEEcCCCCccchhh---HHHHHHHHHHHhCCceeecccCccccccccccCc
Confidence 9999876 57899999999999999999999999999998755 8888888888 99999999999988752 11111
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc----hhhHHHHHHhhhcccc-CC--chHHHHHHHHHHcc
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ----KSGIIDSIKDCLSIYS-DI--PTFIQGAIPQILEK 306 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~----~~~~~~~l~~~~~~~~-~~--~~~~~~a~~~~l~~ 306 (419)
.-..+....-.=.-.+.+|. |+.--.+||++-++.+.+.. ..+....+.......+ .+ ...+|++ +++..
T Consensus 271 ~~fdFr~p~V~Sisa~~HKY-Gl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa--~~~~l 347 (491)
T KOG1383|consen 271 EEFDFRVPGVTSISADGHKY-GLAPAGSSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWA--ALMSL 347 (491)
T ss_pred cccccCCCCceeEeecccee-eeeecCcEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHH--HHHHh
Confidence 01112211111222345675 77666699998877542220 0000001100001111 11 1222333 33333
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
..+.+.+..+.+.+....+++.+++++++..+..|.-++.++ .... .+..++ ..+++++|..+.. ..|
T Consensus 348 -G~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~---~s~~----~~i~el-sd~l~~~GW~lna-lq~-- 415 (491)
T KOG1383|consen 348 -GEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILF---GSND----VNIFEL-SDLLRKKGWILNA-LQF-- 415 (491)
T ss_pred -hHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEc---cCCc----cchhhh-hHHHHhcCcCccc-cCC--
Confidence 356777778889999999999999988888665555443332 2211 133444 4455888987743 332
Q ss_pred CCeEEEEe---ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 387 KNWLRIAF---CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 387 ~~~~Ris~---~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+..+-+++ .+.++-.++++..|+++++++.+
T Consensus 416 P~a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383|consen 416 PAAIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred CCceEEEEEeeeccHHHHHHHHHHHHHHHHHHHh
Confidence 33444554 23455567888888888887643
No 375
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.34 E-value=8.7e-10 Score=96.04 Aligned_cols=293 Identities=14% Similarity=0.111 Sum_probs=184.8
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCc-----HHHHhhcCCEEEEEec
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYY-----EGIAQRKQVEVRHFDL 160 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~-----~~~~~~~g~~~~~~~~ 160 (419)
.+-..++-.+ +..+.+++++.+++-.++.++.+..+ +|++|++++-.-++. ...+...+.. +++
T Consensus 80 ~lgdklApLi------GA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~---~~~ 150 (407)
T COG3844 80 RLGDKLAPLI------GARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIG---YDL 150 (407)
T ss_pred HHHHHhhhhh------cCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhccc---ccc
Confidence 3444455544 57889999999999999988888654 589999887544332 2233333332 111
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
...+.++++++++++++.+|++++.+.-||+.++ +.+|.+++++++++++.|-+|+... -+..+...+.
T Consensus 151 ----~~~~~P~~~~~~~~dd~AvV~L~~V~y~TGql~d---m~aiT~~AH~~galv~wDLAHsaGa----vp~~Lh~~ga 219 (407)
T COG3844 151 ----EGVIAPRALEEAITDDVAVVLLSHVNYKTGQLLD---MRAITALAHQHGALVGWDLAHSAGA----VPVDLHAAGA 219 (407)
T ss_pred ----eeeeChHHHHHhhccceEEEEeccccccccceee---HHHHHHHHHhcCceEEeehhcccCC----cceeecccCC
Confidence 1235677899999988888999999999999999 9999999999999999999999733 2333333343
Q ss_pred CCcEEEEecCCCcCCC-CCceeEEEEeeCCCCcc----------chh-hHHHHHHhh---h-ccccCCchHHHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIF----------QKS-GIIDSIKDC---L-SIYSDIPTFIQGAIPQIL 304 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~----------~~~-~~~~~l~~~---~-~~~~~~~~~~~~a~~~~l 304 (419)
+ +-|+|..|.+.. ||-..|..+.++..... .++ ...+.+... . ...++++..+..++...|
T Consensus 220 D---faigcsyKYLNgGPGapa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aL 296 (407)
T COG3844 220 D---FAIGCSYKYLNGGPGAPAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGAL 296 (407)
T ss_pred C---eeeeeeceeccCCCCCceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhh
Confidence 3 888899998644 45444444443321111 000 000000000 0 112344455555655555
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhcC-C--CCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeE
Q 014769 305 EKTKEDFFCKLIDTLRESAEICYDGVKEI-P--CISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI 377 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-~--~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~ 377 (419)
+-...-.+.+.+++--...+++.+.++.. + +++.+ .|. .|-.+.+..| ...+++..| .++||.
T Consensus 297 Difa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~-tPr~~~~rGsqvS~~hp--------~~~~V~qaL-i~rGVi 366 (407)
T COG3844 297 DIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLV-TPRAHEERGSQVSLYHP--------HGYQVMQAL-IDRGVI 366 (407)
T ss_pred hhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEe-ccchhhhccceeeEecC--------cHHHHHHHH-HHcCcc
Confidence 54333336666666666777777777653 2 34422 443 2445555555 345555555 778996
Q ss_pred eecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhc
Q 014769 378 VTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 378 v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
. .|..++.+|+.+. .+-+++-.+++.|.+++.+..-
T Consensus 367 g----D~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a~ 405 (407)
T COG3844 367 G----DFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLAW 405 (407)
T ss_pred c----cccCCCeeeecCccceechhHHHHHHHHHHHHHHhhcc
Confidence 3 2445789999995 4679999999999999987654
No 376
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.32 E-value=1.7e-09 Score=97.87 Aligned_cols=315 Identities=18% Similarity=0.132 Sum_probs=195.6
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc-ccHHHHHHHHHHHh----cCCC----CeEEeeCCCCCCcHHHHhhcCC
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVT-LGCKQAVEVILSVL----ARPG----ANVLLPRPGWPYYEGIAQRKQV 153 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t-~g~~~al~~~~~~l----~~~g----d~vlv~~p~~~~~~~~~~~~g~ 153 (419)
.+|+.++...+.+||.+.-|+ +.|-+. +.+.++=...+..+ ...| +.+++|+..|..-...+.+.|.
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~----DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~ 179 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGM----DAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGF 179 (496)
T ss_pred HHHHHHHHHHHHHHHHHhcCC----ceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCChhhHhhcCc
Confidence 578999999999999875443 455443 22233333322222 2233 6899999999988899999999
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 233 (419)
+++.++.+.+ ..+|+++|+.++.+++.++.|++|+. -| +=++.+.+|+++.+++|..+..|.+=-.-..+-..+
T Consensus 180 ~VV~V~~~~~--G~VDlddLk~k~~~~~AalMiTnPsT-~G--vFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rP- 253 (496)
T COG1003 180 KVVVVKCDEN--GNVDLDDLRAKAEDNLAALMITNPST-LG--VFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARP- 253 (496)
T ss_pred eEEEEecCCC--CCccHHHHHHHhccceeEEEeccCcc-cc--cchhhHHHHHHHHHHcCCEEEecCcchhhhhccccc-
Confidence 9999998654 46999999999998899999998875 23 335679999999999999999998765433332111
Q ss_pred CccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC-Cccchh----hHHH-HHH---h-h--hccccCCchHHH
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN-GIFQKS----GIID-SIK---D-C--LSIYSDIPTFIQ 297 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~-~~~~~~----~~~~-~l~---~-~--~~~~~~~~~~~~ 297 (419)
..++.+ ++.+ -++|+|..| |...|=+.++..- ...-.| +..+ .+. . . ....+..|....
T Consensus 254 --Gd~G~D--V~Hl-NLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~il 328 (496)
T COG1003 254 --GDMGFD--VVHL-NLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSASIL 328 (496)
T ss_pred --cccccc--eEEe-ecccccccCCCCCCCCCCceehHhhccccCCCCcccCCCccccccCCCCccceeeccccCcchHH
Confidence 122222 3333 477776543 5667777664310 000000 0000 000 0 0 000111222233
Q ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcC
Q 014769 298 GAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEES 375 (419)
Q Consensus 298 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g 375 (419)
..+..++.....+.++...+..--+.+++..+|+.. +.+...+. ...-+.+..............+++++| .++|
T Consensus 329 ~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~--y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrL-lD~G 405 (496)
T COG1003 329 PIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGY--YPVPYTGENRVAHECILDARPLKKETGVRALDVAKRL-LDYG 405 (496)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhhc--CccccCCCCcceeEEEeechHhHhhcCCcHHHHHHHH-HhcC
Confidence 333334443345778888888888899999999862 22222333 233334444322222223577888888 5689
Q ss_pred eEeecCCCCC--CCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 376 VIVTPGIYVG--LKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 376 v~v~~g~~~~--~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+.- |-.+|- ..+.+-|=+. .+.++||+.++.+.++.++..
T Consensus 406 fHa-PT~~FPliV~~tLMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 406 FHA-PTMYFPLIVAGTLMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred CCC-CcccCccccccceeecCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 975 555565 5788888874 467999999999998887654
No 377
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.24 E-value=2.5e-08 Score=101.63 Aligned_cols=305 Identities=13% Similarity=0.162 Sum_probs=180.7
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc--
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATN-----SGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-- 128 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-- 128 (419)
.|+.+.+.+.+. ...++.|.|. +|. -++.+.++++. +.+..|.-+..+++++.+.++.+..
T Consensus 78 ~p~~i~r~v~~~--p~~~TaytPyQ~EisQG~Le~l~e~Qt~i~eLt------Gm~~aNaSl~d~atA~aEa~~~a~~~~ 149 (939)
T TIGR00461 78 LPPVIQRNLLEN--PGWYTAYTPYQPEISQGRLEALLNFQTVVSDLT------GLPVANASLLDEGTAAAEAMALSFNVS 149 (939)
T ss_pred CChHHHHHHHhC--chhhhcCCCCChhhhhHHHHHHHHHHHHHHHHH------CCChhhhhccchhhHHHHHHHHHHHhh
Confidence 456665454432 1224556553 333 34555566665 6777888888999998887777642
Q ss_pred -CCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 129 -RPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 129 -~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
+++++|++++-.|+.+...+ +..|++++.++ +++|+..+ ++..+++.+|+. .|.+-+ ++
T Consensus 150 ~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~----------~~~l~~~~--~~~~v~~q~Pn~-~G~ied---~~ 213 (939)
T TIGR00461 150 KKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVD----------CSDIKKAV--DVFGCLLQYPAT-DGSILD---YK 213 (939)
T ss_pred cCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEc----------HHHHhhcC--CEEEEEEECCCC-CeEEec---HH
Confidence 23489999999998766444 47788877653 34555544 456667778876 788865 99
Q ss_pred HHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC------Ccc
Q 014769 204 EIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN------GIF 273 (419)
Q Consensus 204 ~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~~~ 273 (419)
+|.++++++|.+++++.-...+. ...+...++.| |++++ +|.||.| |.-.|++.+++.- ++.
T Consensus 214 ~i~~~~h~~gal~~~~ad~~al~----ll~~Pge~GaD---i~vg~-~q~fg~p~g~GGP~aG~~a~~~~l~r~lPgriv 285 (939)
T TIGR00461 214 QLIDALHSHKSLVSVAADLMALT----LLTPPGHYGAD---IVLGS-SQRFGVPMGYGGPHAAFFAVKDEYNRKMPGRIV 285 (939)
T ss_pred HHHHHHHHcCCEEEEEechHHhC----CcCCHHHcCCc---EEeeC-CCccCCCCCCCCCceeeeeecHhhHhhCCCCce
Confidence 99999999999999853222211 11222344444 55654 3444542 5558888776520 000
Q ss_pred ---chhh----HH-------HHHHhhhcccc--CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 274 ---QKSG----II-------DSIKDCLSIYS--DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 274 ---~~~~----~~-------~~l~~~~~~~~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
.+.+ +. +.++....+++ +...+...++..++.....+.+++..++...+..++.+.|.+. |++
T Consensus 286 G~s~D~~G~~~~~l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~~-G~~ 364 (939)
T TIGR00461 286 GVSKDALGNTALRLALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEND-PHE 364 (939)
T ss_pred eEEecCCCCccceeecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhC-CCc
Confidence 0000 00 01111111111 1111112222223343446889999999999999999999985 887
Q ss_pred CCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769 338 CPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK 409 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~ 409 (419)
.+ .+ .+|-.+.+... + .+..++..++ .++||.+... .++.+++|+ ..++++|+.+++.+.
T Consensus 365 ~~-~~--~fF~~~~v~~~---~-~~~~~i~~~~-~~~gi~l~~~----~~~~i~~s~~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 365 LI-NK--TWFDTLTVKVG---N-GISSELLKAA-EEFNINLRAV----DTTTVGIALDETTTKADVENLLKVFD 426 (939)
T ss_pred cc-CC--CccceEEEEeC---C-CCHHHHHHHH-HHCCCeeeec----CCCEEEEEeecCCCHHHHHHHHHHhc
Confidence 44 33 33433323210 0 1456666666 5679987652 246899999 468899999999884
No 378
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.15 E-value=1.2e-08 Score=92.92 Aligned_cols=223 Identities=19% Similarity=0.137 Sum_probs=151.0
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHH-HHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEE--
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPAR-RAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVL-- 135 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr-~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl-- 135 (419)
.+++++++++.+.+....-..|.-..|...-| ..+++.+. + ....+.++++++.+.++..+..++..+...|+
T Consensus 38 ~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~---~-~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~ 113 (395)
T COG1921 38 LYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLC---G-LTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSR 113 (395)
T ss_pred cCCHHHHHHHHHHhcccceeeeecccchhhHHHHHHHHHHh---c-ccchhheeeECCcHHHHHHHHhhhccCCeEEEEc
Confidence 46788889999888754322444333332222 23344332 2 34578899999999999999999987444443
Q ss_pred ---eeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc-cccCCCHHHHHHHHHHHHh
Q 014769 136 ---LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP-CGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 136 ---v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np-tG~~~~~~~l~~i~~~~~~ 211 (419)
++ +..+.+.+.++..|.+.+.+.-. ......+++.++.+++.+++-++-+|- .--.++ +++++++|++
T Consensus 114 g~lV~-gg~~~v~d~~~~aG~~l~EvG~t----n~t~~~d~~~AIne~ta~llkV~s~~~~f~~~l~---~~~l~~ia~~ 185 (395)
T COG1921 114 GELVE-GGAFRVPDIIRLAGAKLVEVGTT----NRTHLKDYELAINENTALLLKVHSSNYGFTGMLS---EEELVEIAHE 185 (395)
T ss_pred ccccc-CCCCChhHHHHHcCCEEEEeccc----CcCCHHHHHHHhccCCeeEEEEeecccccccccc---HHHHHHHHHH
Confidence 33 57778899999999998877532 135678899999999988876655542 222355 7789999999
Q ss_pred CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-cccc
Q 014769 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYS 290 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~ 290 (419)
+|+++++|.+.+...............+.+ +++.|-.|. +.|.+.|.++++. +++++++... ....
T Consensus 186 ~~lpvivD~aSg~~v~~e~~l~~~la~GaD---LV~~SgdKl--lgGPqaGii~GkK--------elI~~lq~~~l~Ral 252 (395)
T COG1921 186 KGLPVIVDLASGALVDKEPDLREALALGAD---LVSFSGDKL--LGGPQAGIIVGKK--------ELIEKLQSHPLKRAL 252 (395)
T ss_pred cCCCEEEecCCccccccccchhHHHhcCCC---EEEEecchh--cCCCccceEechH--------HHHHHHHhhhhhhhh
Confidence 999999999887654321122222233333 788899998 5677799999976 7898888763 3334
Q ss_pred CCchHHHHHHHHHHcc
Q 014769 291 DIPTFIQGAIPQILEK 306 (419)
Q Consensus 291 ~~~~~~~~a~~~~l~~ 306 (419)
.......+++.++|+.
T Consensus 253 rv~K~tla~l~~aLe~ 268 (395)
T COG1921 253 RVDKETLAALEAALEL 268 (395)
T ss_pred hcCcHhHHHHHHHHHH
Confidence 5556666666666665
No 379
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.05 E-value=1.3e-08 Score=90.85 Aligned_cols=175 Identities=19% Similarity=0.287 Sum_probs=109.5
Q ss_pred HHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCCeEEeeC-CCCCCcHH----------HHhhcCCE
Q 014769 89 ARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGANVLLPR-PGWPYYEG----------IAQRKQVE 154 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd~vlv~~-p~~~~~~~----------~~~~~g~~ 154 (419)
=|+.+-+.+.+.+| .+..++ .-++|+|+..++..+++|||+++... .-|..... .++.+|+.
T Consensus 55 GRd~le~iyA~vfg----aE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~ 130 (403)
T PF06838_consen 55 GRDKLERIYADVFG----AEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIK 130 (403)
T ss_dssp HHHHHHHHHHHHCT-----SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-E
T ss_pred cHHHHHHHHHHHhC----chhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCce
Confidence 45555555544444 344444 35789999999999999999998553 33433322 33566788
Q ss_pred EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC-CCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCC
Q 014769 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIP 231 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~ 231 (419)
...+++.++ ..+|.+.+++++++++++|+|..- ..-+=..++.++++++++++++. ++++++|.+|++|.-..++
T Consensus 131 Y~~v~L~~d--g~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP 208 (403)
T PF06838_consen 131 YREVPLTED--GTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEP 208 (403)
T ss_dssp EEE--B-TT--SSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-G
T ss_pred eEEEeecCC--CCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCc
Confidence 888887643 469999999999988999988744 33333458999999999998875 7899999999998743222
Q ss_pred CCCccccCCCCcEEEEecCCCcCCCCCc--eeEEEEeeCCCCccchhhHHHHHHhh
Q 014769 232 YTPMGLFGSIVPVITLGSISKRWLVPGW--RFGWLVTNDPNGIFQKSGIIDSIKDC 285 (419)
Q Consensus 232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~--r~G~~~~~~~~~~~~~~~~~~~l~~~ 285 (419)
..++.+ ++.+|+-|..| .|+ --||++++. ++++.....
T Consensus 209 ----~~vGAD---l~aGSLIKNpG-GgiAptGGYIaGr~--------~lVe~~a~R 248 (403)
T PF06838_consen 209 ----TEVGAD---LMAGSLIKNPG-GGIAPTGGYIAGRK--------DLVERAAYR 248 (403)
T ss_dssp ----GGGT-S---EEEEETTSGGG-TTT-SS-EEEEESH--------HHHHHHHHH
T ss_pred ----cccchh---heeccceeCCC-CCccCcCCEEechH--------HHHHHHHhh
Confidence 234444 89999999944 332 259999876 688776654
No 380
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.04 E-value=1.1e-07 Score=88.92 Aligned_cols=281 Identities=16% Similarity=0.193 Sum_probs=144.8
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---CCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL 160 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~ 160 (419)
++..-|++.. +.+..+.-+-.+++++-+.++.+.. ++.++|+++.-.|+.+.. .+...|++++.++.
T Consensus 114 e~Qs~i~eLT------GmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~ 187 (429)
T PF02347_consen 114 EYQSMICELT------GMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPL 187 (429)
T ss_dssp HHHHHHHHHH------TSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-B
T ss_pred HHHHHHHHhh------CCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEecc
Confidence 4555555555 4555566677777777776666542 334699999999998766 44556888888876
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
+... ..| ++++.+|++.+||. .|.+-+ +++|.++++++|.++++ .+-- ..... ..+...++.
T Consensus 188 ~~~~--~~d--------~~~~a~v~vq~Pn~-~G~~ed---~~~i~~~~h~~gal~~~-~ad~-~aL~~--l~~Pge~GA 249 (429)
T PF02347_consen 188 DEDG--TTD--------DDDTAAVMVQNPNT-FGVFED---IKEIADIAHAAGALVIV-GADP-NALGG--LKSPGEYGA 249 (429)
T ss_dssp BTTC--SB---------STTEEEEEEESS-T-TSB--T---HHHHHHHHHHTT-EEEE-CGGC-CGCCT--C--GGGGT-
T ss_pred cccC--Ccc--------ccCeEEEEeecCCC-CceEee---HHHHHHHHHHcCCEEEE-ecCH-HHHhC--cCChhhcCc
Confidence 5432 223 45788999999987 788766 99999999999998876 3221 12221 122234555
Q ss_pred CCcEEEEecCCCcCCCC----CceeEEEEeeCCC------Ccc---ch----h-------hHHHHHHhhhccc--cCCch
Q 014769 241 IVPVITLGSISKRWLVP----GWRFGWLVTNDPN------GIF---QK----S-------GIIDSIKDCLSIY--SDIPT 294 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~~~---~~----~-------~~~~~l~~~~~~~--~~~~~ 294 (419)
| |++++ +|.||.| |..+|++.+++.- ++. .+ . .--+.++....++ .+...
T Consensus 250 D---I~vg~-~Q~fg~p~~~GGP~~G~~a~~~~l~r~lPGRiVG~t~D~~G~~~~~ltLqtREQHIrReKAtSNIctnqa 325 (429)
T PF02347_consen 250 D---IVVGE-HQTFGIPMGFGGPGAGFFAVREDLVRQLPGRIVGQTKDADGKRAFVLTLQTREQHIRREKATSNICTNQA 325 (429)
T ss_dssp S---EEEEC-CTTTT---CCC-S--EEEEE-GGGGGGS-S-EEEEEEBCCCSCCEEEE-GGGTCHHHGCCSTT---SS-H
T ss_pred c---EEeeC-CCCCcccCCCCCCCeeeEEEhhhhhhhCCCceecccccccccceeeeccccccccccccchhhhhhhhHH
Confidence 4 66765 7887754 6779999887630 000 00 0 0001222222111 12222
Q ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769 295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374 (419)
Q Consensus 295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (419)
+...++..++.....+.+++..++...+.+++.+.|+++.+.. + ....+|-++.... .. ..+.+++ ++
T Consensus 326 L~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~-~--~~~~f~e~v~~~~-------~~-~~~~~l~-~~ 393 (429)
T PF02347_consen 326 LLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLP-F--DNPFFFEFVVVFS-------KD-KEVEELL-KR 393 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBEC-S--SSSSBSSEEEEES-------S--HHHHHHH-HT
T ss_pred HHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCcc-c--CCCCceeeeeecC-------Cc-HHHHHHH-HH
Confidence 3333344444444578999999999999999999999863333 2 2222322222211 11 1222332 22
Q ss_pred CeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHH
Q 014769 375 SVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRM 408 (419)
Q Consensus 375 gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l 408 (419)
++.---+..+...+++-+++. .++++|+.+++.+
T Consensus 394 ~~~~gl~~~~~~~~~~li~~TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 394 GIEGGLNLRYPDDGALLICVTETRTKEDIDRLVEAF 429 (429)
T ss_dssp T----EEEGGG-SSEEEEE--TT--HHHHHHHHH--
T ss_pred HHhcCCCccccCCCeEEEEccCCCCHHHHHHHHhcC
Confidence 332111111122457888884 5789999988754
No 381
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=99.01 E-value=2e-07 Score=85.25 Aligned_cols=321 Identities=13% Similarity=0.067 Sum_probs=180.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCCC-------CCCCcEEEcccHHHHHHHHHHHhc-C------CC-----------C-eEEe
Q 014769 83 NSGIPPARRAIADYLSRDLPYK-------LSADDVYVTLGCKQAVEVILSVLA-R------PG-----------A-NVLL 136 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~-------~~~~~i~~t~g~~~al~~~~~~l~-~------~g-----------d-~vlv 136 (419)
++-..+|+..+.+|+.+..+.+ .....=++-.+++++...++.+.. + .+ + .+..
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628|consen 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhhhheEEe
Confidence 4567899999999998866543 122222344444555444444331 1 11 1 3446
Q ss_pred eCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-----ccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 137 PRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-----TAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 137 ~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
.+.++.+....+...|++.+.++.+. +++++.+.|++++.++ .+.+++.+.. -||. -.-+++.+|..+|++
T Consensus 188 SDqahssveka~~i~~VklR~l~td~--n~~mr~~~L~~AIe~D~arGlIPf~v~at~G-TT~~-ca~D~l~elg~Vc~~ 263 (511)
T KOG0628|consen 188 SDQAHSSVEKACLIAGVKLRALPTDE--NFGMRGDTLRKAIEEDIARGLIPFFVCATLG-TTSS-CAFDELEELGPVCRE 263 (511)
T ss_pred cCcccchHHHhHhhcceeEEEeeccc--CcCCCHHHHHHHHHHHHhCCCccEEEEEeec-Cccc-cccccHHHhcchhhh
Confidence 67788888888888899988888654 8899999999988652 2233333332 1333 344679999999999
Q ss_pred CCCeEEEcccccccccCCCCCCCccc-cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc----chhhHHH-HHHh-
Q 014769 212 LRVMVVADEVYGHLTFGSIPYTPMGL-FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF----QKSGIID-SIKD- 284 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~~~~~~~~~-~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~----~~~~~~~-~l~~- 284 (419)
+++|+.+|.+|++..+..+.+..+.. ++..+ =+....||+ ++--+-+.-+..++...+. -+|...+ ..+.
T Consensus 264 ~glWLHVDAAYAGsa~iCpE~r~l~rGie~aD--Sfn~n~hK~-~~vnfDCs~lWvkd~~~~~~~~~vdp~yL~h~~~~~ 340 (511)
T KOG0628|consen 264 EGLWLHVDAAYAGSAFICPEFRYLMRGIEYAD--SFNFNPHKW-LLVNFDCSPLWVKDGTKLSRAFNVDPLYLKHAYQGS 340 (511)
T ss_pred cCEEEEeehhhccccccCHHHHHHhhcchhhc--cccCChhhe-eEEeeeeecceeecCceeeeeeecChHhhcchhhcc
Confidence 99999999999976655433322211 11111 111234555 3433444444443321100 0000110 0000
Q ss_pred hhccccCCchHHH--HHHHHH--HcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC
Q 014769 285 CLSIYSDIPTFIQ--GAIPQI--LEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI 360 (419)
Q Consensus 285 ~~~~~~~~~~~~~--~a~~~~--l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~ 360 (419)
...+-...-+.++ .++... ++...-+.+++..++..+..+.+...+.+-+.++.+.+..=|+. .+++...+
T Consensus 341 ~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLv-cFRlk~~N---- 415 (511)
T KOG0628|consen 341 APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLV-CFRLKGDN---- 415 (511)
T ss_pred CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeccccccee-EEeecCCc----
Confidence 0011000011111 111111 12212245555555666666666666666667874434444544 45665432
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.....+..++-....|.+.|.+. ...-.+|++++ +++++++++-+.|.+...++.
T Consensus 416 ~~ne~Ll~~in~~g~i~l~~~~l-~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l~ 473 (511)
T KOG0628|consen 416 EINEALLNRLNSSGRIHLVPASL-HGKFVLRFAVCSPLTNESDIDEAWKIIFEAADELF 473 (511)
T ss_pred HHHHHHHHHHHhcCcEEEEEeee-cceEEEEEEecCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 24567888887778888888653 22346899984 578999999999998887754
No 382
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.98 E-value=4e-07 Score=81.50 Aligned_cols=332 Identities=14% Similarity=0.078 Sum_probs=184.7
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC-----C-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-----T-NSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-----~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+.+.||+.| |+ ..++++++...+-+.+..-.+++ . .+-...+-+...+.+.+.++++-+-+-+++-.|
T Consensus 4 ~~~~nFsaG-Pa-----~lp~~vL~~a~~e~~~~~g~g~svme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG 77 (365)
T COG1932 4 PRVYNFSAG-PA-----ALPPEVLQQAQKELLDWNGLGMSVMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCCC-cc-----cCCHHHHHHHHHHHhhhccCCcceeeeccccHHHHHHHHHHHHHHHHHhCCCCCceEEEEcCc
Confidence 446789888 32 23555555555444331111111 1 112234444444445555565544445566677
Q ss_pred HHHHHHHHHHHhcCCCCeEEeeCCCCCCc-HHHHhhcCCEEEEEecc-CCC--CcccChHHHHHhhcCCccEEEEeCCCC
Q 014769 116 CKQAVEVILSVLARPGANVLLPRPGWPYY-EGIAQRKQVEVRHFDLL-PER--NWEVDLDAVEALADKNTAAMVIINPGN 191 (419)
Q Consensus 116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~-~~~~~~~g~~~~~~~~~-~~~--~~~~~~~~l~~~~~~~~~~v~i~~p~n 191 (419)
+|..+..+...|..+...-.+....|... ...++..+..+...... ... +.-++++.+. +.++...|.+|+-..
T Consensus 78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeT 155 (365)
T COG1932 78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPDLSKWD--FSDNDAYVHFCWNET 155 (365)
T ss_pred cHHHHHHHHHhhhcccCceeEeeeehhHhHHHHHHHhcccccccccceeccCccCCCChhhcc--cCCCccEEEEecCCc
Confidence 89999999999886544313334444332 22334444322211111 111 2234444333 222333366665555
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
-+|+.++ +...+. .+.++|.|.....+. ...++..++ ++..+..|.+|..| ++.++.++
T Consensus 156 i~Gv~v~--~~p~~~-----~~~~~v~D~SS~ils----r~iDvsk~d-----viyagaQKnlGpaG--ltvvIvr~--- 214 (365)
T COG1932 156 ISGVEVP--ELPDIG-----SDGLLVADASSAILS----RPIDVSKYD-----VIYAGAQKNLGPAG--LTVVIVRP--- 214 (365)
T ss_pred ccceEcc--CCCCCC-----CCceEEEecccHHhc----CCCChhHcc-----eEEEehhhccCccc--eEEEEEcH---
Confidence 6787765 111111 127888887766533 222333332 55668999998888 88888865
Q ss_pred ccchhhHHHHHHhh--------------hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769 272 IFQKSGIIDSIKDC--------------LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCI 336 (419)
Q Consensus 272 ~~~~~~~~~~l~~~--------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 336 (419)
++++++... .++..+|+..+.+.+..+++... ...++.+.++-+++.+.+++.+.+-+-.
T Consensus 215 -----~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy 289 (365)
T COG1932 215 -----DLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFY 289 (365)
T ss_pred -----HHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCcc
Confidence 344433321 12346777777777776666533 3567888888899999999999875211
Q ss_pred CCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHH
Q 014769 337 SCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 337 ~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~ 412 (419)
.....+ .+-+-+.+++.+.. -+..|+.++ +++|+...-|. ...+.+|+++ +.+.|+++.+++-++.+.
T Consensus 290 ~~~v~~~~RS~mnV~f~~~~~~-----ld~~fv~ea-e~~gl~~lkGh--r~vgGmRasiynA~~~e~veaL~~fm~~f~ 361 (365)
T COG1932 290 RNLVAKANRSRMNVTFTLVDAE-----LDKGFVAEA-EAAGLIYLKGH--RSVGGLRASIYNAVPLEDVEALTDFMDWFE 361 (365)
T ss_pred ccccchhhccceeEEEEcCcHH-----HHHHHHHHH-HHcCCceeccc--cCCCceeeeeecCCCHHHHHHHHHHHHHHH
Confidence 111122 23455556665321 245666666 55677776662 2345699999 458899999999988887
Q ss_pred HHH
Q 014769 413 QRH 415 (419)
Q Consensus 413 ~~~ 415 (419)
+++
T Consensus 362 ~~~ 364 (365)
T COG1932 362 ETY 364 (365)
T ss_pred Hhh
Confidence 764
No 383
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.96 E-value=1.1e-06 Score=78.03 Aligned_cols=312 Identities=17% Similarity=0.205 Sum_probs=194.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----CCCeEEeeCCCCCCc-HHHHhhcC
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----PGANVLLPRPGWPYY-EGIAQRKQ 152 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~gd~vlv~~p~~~~~-~~~~~~~g 152 (419)
.|+.+.++..|.+++.+.+ + -+.++-|+-+..|-++++..+++ ||.+..+++..|+.. ..-.+..|
T Consensus 74 AYagsrs~~~L~~avkdif------G--fq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng 145 (471)
T COG3033 74 AYAGSRSYYALADAVKDIF------G--FQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQING 145 (471)
T ss_pred hhcccccHHHHHHHHHHhc------C--ceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhHHHHhcC
Confidence 6888889999999999987 2 36778899999998888888766 455556666666643 34445567
Q ss_pred CEEEEEeccCCCC--------cccChHHHHHhhcC----CccEEEEe-CCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 153 VEVRHFDLLPERN--------WEVDLDAVEALADK----NTAAMVII-NPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 153 ~~~~~~~~~~~~~--------~~~~~~~l~~~~~~----~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
..++-++++...+ ..+|++.|++.+++ +.+.|+++ +.|.-.|+..|.+.+++..++|++|++.++.|
T Consensus 146 ~~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~D 225 (471)
T COG3033 146 ATPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMD 225 (471)
T ss_pred CccccccccccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEee
Confidence 6666665543211 35789999998865 33444433 44557789999999999999999999999999
Q ss_pred cccc-cccc---CCC---CCCCcc-------ccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHh
Q 014769 220 EVYG-HLTF---GSI---PYTPMG-------LFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKD 284 (419)
Q Consensus 220 e~~~-~~~~---~~~---~~~~~~-------~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~ 284 (419)
.+-. +-.| ..+ ...++. ++.+ . +++ |.-|- ++.- + |+++.++ +..+ ++...++.
T Consensus 226 a~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD-~--~~m-S~KKD-~lvn--mGGfl~~~D-~~~f---Dvy~~~~~ 294 (471)
T COG3033 226 AARFAENAYFIKQREPGYRDWSIEEIAREMYSYAD-G--CTM-SAKKD-GLVN--MGGFLCFKD-DSFF---DVYEECRT 294 (471)
T ss_pred hhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhh-h--hee-ecccc-ceec--cccEEEecC-ccHH---HHHHHHHh
Confidence 8642 1111 100 011111 1111 1 222 55565 4432 3 5665554 2222 34455554
Q ss_pred hh------ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 285 CL------SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 285 ~~------~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
.. ...++.+.-...+++.-|.+.. .+|+..+..+++ +|.+.|.+. |+. +..|.||.-++++....-.
T Consensus 295 ~~V~~eG~~tYGgl~GrdmealAvGL~e~~~~~yl~~Rv~Qv~----YL~~~l~~~-GVp-i~~paGGHavfvda~~~lp 368 (471)
T COG3033 295 LVVVQEGFPTYGGLAGRDMEALAVGLREGVNFDYLAHRVAQVQ----YLADGLEEA-GVP-IVQPAGGHAVFVDAGKFLP 368 (471)
T ss_pred heEeeccccccCcccchhHHHHHHHHHHhcCcHHHHHHHHHHH----HHHHHHHhc-CCe-eEecCCCceEEeehhhhcC
Confidence 32 1223334334455555555433 577777666655 556666665 776 4488888888876533110
Q ss_pred ---cCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------CCeEEEEee---cCHHHHHHHHHHHHHHHHHH
Q 014769 358 ---EDINDDIEFALKLAKEESVIVTPGIYVGL-------------KNWLRIAFC---AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 358 ---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..-.+..++-+|.++.||...--..|.. -.-+|+++- -+.+.++..++.++++.+.-
T Consensus 369 hip~eqFpaqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~ 445 (471)
T COG3033 369 HIPAEQFPAQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENA 445 (471)
T ss_pred CCChhhCcHHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEeccccccchhHHHHHHHHHHHHHhcc
Confidence 11124677888899999998764444421 146999992 47899999999998877653
No 384
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.86 E-value=1e-05 Score=73.98 Aligned_cols=312 Identities=16% Similarity=0.154 Sum_probs=175.4
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCC-----CCC----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc--
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATN-----SGI----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-- 128 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~-----~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-- 128 (419)
.|+.+.+.+.+. ...++.|.|. +|. -++..-++++. +++-.|.-+-.++|++-+.++.+..
T Consensus 89 ~P~vI~rnile~--pewyTaYTPYQpEISQGrLqaLfefQtlv~dLT------Gm~VANASm~DeaTAaAEAm~ma~r~~ 160 (450)
T COG0403 89 TPPVILRNILEN--PEWYTAYTPYQPEISQGRLEALFEFQTLVADLT------GLDVANASMLDEATAAAEAMLMAKRVT 160 (450)
T ss_pred CcHHHHHHhhcC--ccccccCCCCchhhhhHHHHHHHHHHHHHHHHh------CCCcccchhhhhHHHHHHHHHHHHHhh
Confidence 455554444332 2345566663 332 23344455554 5666677777788877777766653
Q ss_pred -CCCCeEEeeCCCCCCcHHHHh----hcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHH
Q 014769 129 -RPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 129 -~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
.+..+++++.-+|+.+...++ -.|.++..++.+ |++.++.....++..+++..|+. .|. ..++++
T Consensus 161 k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~-------d~~~l~~~~~~~~~gv~vQyP~~-~G~--~~~d~~ 230 (450)
T COG0403 161 KKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDAD-------DLDDLESADDGDVFGVLVQYPNT-FGI--VEEDLR 230 (450)
T ss_pred cCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccc-------hhhhhhhccccCeEEEEEecCCC-CCc--cchhHH
Confidence 235899999999998766554 335555555432 67777777333667888888875 562 234599
Q ss_pred HHHHHHHhCCCeEEE--cccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC------C
Q 014769 204 EIAEMARKLRVMVVA--DEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN------G 271 (419)
Q Consensus 204 ~i~~~~~~~~~~li~--De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~------~ 271 (419)
++.+.+++++.++++ |-.--. -..+...++.+ |++++..-. |.| |..+||+.++..- +
T Consensus 231 ~l~~~~h~~~al~~v~aDplaL~------LL~pPGe~GAD---IvvG~~Qrf-GvPmgfGGPhag~fA~~~~~~R~mPGR 300 (450)
T COG0403 231 ALIEAAHSAGALVIVAADPLALG------LLKPPGEFGAD---IVVGSAQRF-GVPMGFGGPHAGYFAVKDEFKRQMPGR 300 (450)
T ss_pred HHHHHHhhcCCEEEEEechhHhh------ccCCccccCCc---eEEecCccc-CCCcCCCCcceeeeeEhHhHhhcCCCc
Confidence 999999999987665 211111 11122344444 888887764 554 7889999987631 0
Q ss_pred cc-------chhhHH-------HHHHhhhccc-cCCc-hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-
Q 014769 272 IF-------QKSGII-------DSIKDCLSIY-SDIP-TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP- 334 (419)
Q Consensus 272 ~~-------~~~~~~-------~~l~~~~~~~-~~~~-~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~- 334 (419)
+. .++.+. +.+|....++ -+.+ .+...++..++.....+.+.++..+..+...++.+.|++..
T Consensus 301 lVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~ 380 (450)
T COG0403 301 LVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGA 380 (450)
T ss_pred eeeeeecCCCCchhhhhHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCC
Confidence 00 001111 1112111111 1111 11222222233334478899999999999999999999652
Q ss_pred CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAF 411 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~ 411 (419)
|++.+ .. .+|-.+.+.... .....+..+. ...|+-+..-. .+.+-+++ .+++++|+.+++.+...
T Consensus 381 g~~~~-~~--~fFdt~~v~~~~----~~~~~l~~~~-~~~G~~L~~~~----~~~~~ia~tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 381 GVELV-FD--HFFDTFTVRVPE----EVAEALLAAA-IAGGINLRRVD----ADTVLIALTETTTKEDIDALVAAFGGV 447 (450)
T ss_pred ceEec-cc--cceeeEEEecch----hHHHHHHHHH-HhcCCceeeec----CCceEEEeecccCHHHHHHHHHHHhhh
Confidence 45522 22 444333332100 0122333333 34566554322 34666776 35689999888887654
No 385
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.80 E-value=1.4e-06 Score=77.06 Aligned_cols=215 Identities=13% Similarity=0.086 Sum_probs=115.5
Q ss_pred hHHHHHhhcC-----CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCC
Q 014769 170 LDAVEALADK-----NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSI 241 (419)
Q Consensus 170 ~~~l~~~~~~-----~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~ 241 (419)
++++++.+.. .+.+.+|+.| +...|- ..|++.+++|.++|++|++.+|+||++.+..-+|.-.. .-..++..
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 4445554432 3566688888 555554 67999999999999999999999999998665553211 01112222
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
..++ +|||-+ ..| ||..- ++.+-+ +..+. .+ ++...+.-...+.++++....+.+-++.++.
T Consensus 335 pD~v---TFSKK~-q~g---Gffh~--~~frpn-----~pYri-fN-TWmGdP~k~lll~~vv~~I~~~~Ll~n~~~v-- 396 (484)
T KOG1405|consen 335 PDVV---TFSKKF-QTG---GFFHD--EEFRPN-----EPYRI-FN-TWMGDPSKNLLLEEVVQEIKREDLLNNVAHV-- 396 (484)
T ss_pred ccce---ehhhhh-hcC---ccccC--cccCCC-----chHHH-hh-hhcCChHHHHHHHHHHHHHhHHHHHHHHHHH--
Confidence 1223 799996 444 55533 211110 11111 12 2222333333344444443333333333332
Q ss_pred HHHHHHHHhh----cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--e
Q 014769 322 SAEICYDGVK----EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--C 395 (419)
Q Consensus 322 ~~~~l~~~l~----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~ 395 (419)
.+.+...|. +.|+...- ....|-|+-+++|.. ...+..-..++-.||.+--+ + ...+|+-+ .
T Consensus 397 -G~~l~~gL~~Lq~~~p~~~~~-~RGrGTF~a~d~ps~------~~Rdk~i~~~~~nGv~~GGC---g-~~siRfRPsLv 464 (484)
T KOG1405|consen 397 -GKALLKGLLELQAKYPGKINN-LRGRGTFIAWDCPSG------SIRDKLILIARLNGVNLGGC---G-DKSIRFRPSLV 464 (484)
T ss_pred -HHHHHHHHHHHHHhCchhhhc-ccccceEEEEeCCCh------HHHHHHHHHHHHcCceeccc---c-cceeeecccee
Confidence 333333332 35554312 233455666677753 22333334457788876332 2 34556655 4
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~ 414 (419)
..+...+..++++.+.+..
T Consensus 465 f~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 465 FRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ehhhhHHHHHHHHHHHhcc
Confidence 5777888888888887754
No 386
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.76 E-value=3.1e-06 Score=77.42 Aligned_cols=290 Identities=15% Similarity=0.099 Sum_probs=148.9
Q ss_pred CcEEEcccHHHH-HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC-CcccChHHHHHhhcC---C
Q 014769 108 DDVYVTLGCKQA-VEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADK---N 180 (419)
Q Consensus 108 ~~i~~t~g~~~a-l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~---~ 180 (419)
...++++-+|.- +.+.+.++. ..++.|+.+.-.+......+...|++++.++..... ....|++.+++.+++ +
T Consensus 75 ~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~kai~~AGl~~~vV~~~~~~d~l~td~~~ie~~i~~~G~~ 154 (389)
T PF05889_consen 75 KSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCFKAIERAGLEPVVVENVLEGDELITDLEAIEAKIEELGAD 154 (389)
T ss_dssp CEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHHHHHHHTT-EEEEE-EEEETTEEEEHHHHHHHHHHHHCGG
T ss_pred cceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchHHHHHhcCCeEEEeeccCCCCeeeccHHHHHHHHHHhCCC
Confidence 456666666544 333444443 356899999888877778888899999888853332 334567777777653 4
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCc
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGW 259 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~ 259 (419)
..+.++++++.--+... +++.+|+++|+++|+..|+..||+-=... -...+..-...++ .+++.|+-|.|..| .
T Consensus 155 ~iLcvltttscfapr~~--D~i~~IakiC~~~~IPhlvNnAYgvQ~~~--~~~~i~~a~~~GRvda~vqS~dkNF~VP-v 229 (389)
T PF05889_consen 155 NILCVLTTTSCFAPRLP--DDIEEIAKICKEYDIPHLVNNAYGVQSSK--CMHLIQQAWRVGRVDAFVQSTDKNFMVP-V 229 (389)
T ss_dssp GEEEEEEESSTTTTB------HHHHHHHHHHHT--EEEEGTTTTT-HH--HHHHHHHHHHHSTCSEEEEEHHHHHCEE-S
T ss_pred CeEEEEEecCccCCCCC--ccHHHHHHHHHHcCCceEEccchhhhHHH--HHHHHHHHHhcCCcceeeeecCCCEEec-C
Confidence 45667777654444443 36999999999999999999999840000 0000000000011 16777899998654 2
Q ss_pred eeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh----cCCC
Q 014769 260 RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK----EIPC 335 (419)
Q Consensus 260 r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~ 335 (419)
.-+.+++++ +..+..+.....-- ...++.......++.-+.. .+.......++...++.+.|+ +. +
T Consensus 230 Ggai~As~~-------~~~i~~vs~~YpGR-as~sp~ld~~itLl~LG~~-g~~~ll~~r~~~f~~l~erl~~~aee~-~ 299 (389)
T PF05889_consen 230 GGAIMASFD-------PSGILAVSKEYPGR-ASASPSLDLFITLLSLGCT-GYGALLKERKASFPYLKERLKKWAEEV-G 299 (389)
T ss_dssp SHEEEEESS-------HHHHHHHHHTSHSH-BTSHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred CCcEEEecC-------HHHHHHHHHHhhhh-hhcccchHHHHHHHHHhhh-HHHHHHHHHHHHHHHHHHHHHHHHHHh-h
Confidence 234455443 35666666543211 1122233344444443332 233333333333333333333 22 2
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeE----eecCCCCC-------CCCeEEEEe--ecCHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVI----VTPGIYVG-------LKNWLRIAF--CAEPSALK 402 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~----v~~g~~~~-------~~~~~Ris~--~~~~~~l~ 402 (419)
-.....|.....+.+.++....... .+.-++...|..++|. |.|+..+. ...++=++. +.++||++
T Consensus 300 e~ll~~p~N~is~a~tl~~l~~~~~-k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~AsaiG~~~eevd 378 (389)
T PF05889_consen 300 ERLLETPRNHISMAFTLDTLYEISQ-KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAASAIGMTREEVD 378 (389)
T ss_dssp EEBSSSTT-SSEEEEE-TTCCTCCS-SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE-TT--HHHHH
T ss_pred hhhcCCCCCCeeEEEECccchhhcc-chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHHHhCCCHHHHH
Confidence 1212245544444455543211011 2334445555767773 33332221 136888854 78999999
Q ss_pred HHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQ 413 (419)
Q Consensus 403 ~~l~~l~~~~~ 413 (419)
.++++|+++++
T Consensus 379 ~~v~rL~k~i~ 389 (389)
T PF05889_consen 379 YFVKRLDKIIK 389 (389)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhC
Confidence 99999999875
No 387
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.75 E-value=1.8e-08 Score=91.08 Aligned_cols=251 Identities=19% Similarity=0.173 Sum_probs=50.8
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCC-----HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGI-----PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd 132 (419)
.+.++++.+++.+.+.......|.-..|- ..+.+.+++. ...+..+++++..+|+..++.+++ +|.
T Consensus 16 s~l~~~a~~a~~~~a~~Y~nLE~dl~~G~Rg~R~~~v~~ll~~l--------tgAeaA~VvNnnaAAv~L~l~~la-~~~ 86 (367)
T PF03841_consen 16 SPLSEEAIEAVAEVASGYSNLEYDLETGKRGSRYAHVEELLCEL--------TGAEAALVVNNNAAAVLLALNTLA-KGK 86 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccc--------cccccccccccccccccccccccc-ccc
Confidence 35677888888776644322234322222 1222233332 356788899999999999999886 567
Q ss_pred eEEeeCCCCC------CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc--ccCCCHHHHHH
Q 014769 133 NVLLPRPGWP------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC--GNVFTYHHLQE 204 (419)
Q Consensus 133 ~vlv~~p~~~------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt--G~~~~~~~l~~ 204 (419)
+|++..-.-. -+.++....|..++.+... ....+++.+++++++|.+++.++++|.. |..-+ -.+++
T Consensus 87 EvIvsRGelVeiGgsFRip~vm~~sGa~lvEVGtt----N~t~~~Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~-~~~~e 161 (367)
T PF03841_consen 87 EVIVSRGELVEIGGSFRIPDVMRQSGARLVEVGTT----NRTHLSDYEKAITENTAALLKVHTSNFRIQGFTGE-VSLEE 161 (367)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred ccccccccccccccccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc-ccHHH
Confidence 7776643322 2456677778887776532 1356788899999999999999988753 32211 13899
Q ss_pred HHHHHHhCCCeEEEcccccccc----cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 205 IAEMARKLRVMVVADEVYGHLT----FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~----~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
+++++++|++++++|...+.+. |+-..-+.+..+-..+-.+++.|-.|.++ |...|.++++. ++++
T Consensus 162 l~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLG--GPQaGiI~Gkk--------~lI~ 231 (367)
T PF03841_consen 162 LAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLG--GPQAGIIVGKK--------ELIE 231 (367)
T ss_dssp HHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEEEEETTSSSS--S-S-EEEEEEH--------HHHH
T ss_pred HHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCC--CCCeEEEEeCH--------HHHH
Confidence 9999999999999998774332 11111122333333333478888899854 55589999986 7999
Q ss_pred HHHhhh-ccccCCchHHHHHHHHHHcccch-----------HHHHHHHHHHHHHHHHHHHHhhc
Q 014769 281 SIKDCL-SIYSDIPTFIQGAIPQILEKTKE-----------DFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 281 ~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
+++... ....-+.-....++.+.|+.... ..+....+.++++.+.+...|..
T Consensus 232 ~lk~~pl~RalrvdK~tla~L~atL~~Y~~~~~~~~~ip~l~ml~~~~~~L~~rA~~l~~~l~~ 295 (367)
T PF03841_consen 232 KLKKHPLGRALRVDKLTLAALEATLRLYLDPDKAKEEIPTLRMLTQSLEELRARAERLAAQLKA 295 (367)
T ss_dssp HHHHHHHTTT-B--HHHHHHHHHHHHH-------------------------------------
T ss_pred HHhhCCCcceEeeCHHHHHHHHHHHHHHHHhhcccccccccccccccccccccccccccccccc
Confidence 888653 22334455555555555543221 11333345566666666666665
No 388
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.65 E-value=1.5e-06 Score=75.28 Aligned_cols=170 Identities=18% Similarity=0.264 Sum_probs=111.9
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC-CCCcH----------HHHhhcC
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG-WPYYE----------GIAQRKQ 152 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~-~~~~~----------~~~~~~g 152 (419)
-|-..|.+-.|+-+ |.....-+.-+. ++|+|+..++..+++|||+.+..... |.... ..++..|
T Consensus 65 ~GRdtLe~vyA~vf----~aE~a~VRpq~i-sGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfg 139 (416)
T COG4100 65 LGRDTLERVYAQVF----GAEAALVRPQII-SGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFG 139 (416)
T ss_pred cchhHHHHHHHHHh----ccccceeeeeee-cchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhC
Confidence 46566666666655 322222233344 55899999999999999998855332 32221 2344556
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC-CCccccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGS 229 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~ 229 (419)
+....+++.+ +..+|.+.+...++++++++.|..- ..----.++.+++++++++.++. |+++++|.+|++|.-.-
T Consensus 140 i~Y~~v~Lt~--~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~ 217 (416)
T COG4100 140 IKYKAVPLTA--DGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEK 217 (416)
T ss_pred cceeeccccc--CCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhcc
Confidence 6666677654 3479999999999999999887643 11111137889999999999875 68999999999987443
Q ss_pred CCCCCccccCCCCcEEEEecCCCcCCCCCce--eEEEEeeC
Q 014769 230 IPYTPMGLFGSIVPVITLGSISKRWLVPGWR--FGWLVTND 268 (419)
Q Consensus 230 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r--~G~~~~~~ 268 (419)
++. ..+.+ +.-+|+-|. ...|+- -||++++.
T Consensus 218 EPt----~vGaD---liAGSLIKN-pGGgiaktGGYiaGk~ 250 (416)
T COG4100 218 EPT----HVGAD---LIAGSLIKN-PGGGIAKTGGYIAGKA 250 (416)
T ss_pred Ccc----ccchh---hhccceeeC-CCCceeeccceeechH
Confidence 221 22333 677889898 333322 48888765
No 389
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.62 E-value=6.3e-05 Score=76.97 Aligned_cols=277 Identities=12% Similarity=0.105 Sum_probs=154.3
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---CCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEec
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDL 160 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~---~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~ 160 (419)
++..-|+++. +.+..|.-+-.++|++-+.++.+.. .+..+|++++-.|+.+...+ +..|++++.
T Consensus 128 e~Qtmi~~Lt------Gm~vaNASl~D~atA~aEA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~--- 198 (954)
T PRK12566 128 NFQQMTIDLT------GLDLANASLLDEATAAAEAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV--- 198 (954)
T ss_pred HHHHHHHHHh------CchhhhhhhccchhHHHHHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE---
Confidence 3444555554 4555565566676666555544442 22468999999998766544 344555443
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
++++..+..+...+++.+|+. .|.+-+ +++|.++++++|.++++ .+.- +..+ ...+...++.
T Consensus 199 ----------~~~~~~~~~~~~~v~vq~P~~-~G~i~d---~~~i~~~~h~~gal~~~-~~d~-laL~--ll~~Pge~GA 260 (954)
T PRK12566 199 ----------DAVDNLAAHAVFGALLQYPDT-HGEIRD---LRPLIDQLHGQQALACV-AADL-LSLL--VLTPPGELGA 260 (954)
T ss_pred ----------cchhhcCCCCEEEEEEECCCC-ceEEcc---HHHHHHHHHHcCCEEEE-EeCH-HHHh--CCCChhhcCC
Confidence 233344444667788888876 788755 89999999999987653 2211 1111 1112234444
Q ss_pred CCcEEEEecCCCcCC----CCCceeEEEEeeCCC------Ccc-------chhhHH-------HHHHhhhccc-cCCch-
Q 014769 241 IVPVITLGSISKRWL----VPGWRFGWLVTNDPN------GIF-------QKSGII-------DSIKDCLSIY-SDIPT- 294 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~------~~~-------~~~~~~-------~~l~~~~~~~-~~~~~- 294 (419)
+ |++++ ++.|| ..|.-.||+.+++.- ++. .++.+. +.++....++ .+.+.
T Consensus 261 D---I~vG~-~Q~fGvp~~~GGP~ag~~a~~~~~~R~~PGRivG~s~D~~G~~a~~l~LqtREQHIRReKAtSNICT~qa 336 (954)
T PRK12566 261 D---VVLGS-TQRFGVPMGYGGPHAAYFACRDDYKRAMPGRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQV 336 (954)
T ss_pred c---EEeeC-CCcCCCCCCCCCCCeeeeeehHHHHhhCCCCccceeecCCCCeeeehhhhHHHHHhhhccccchhhHHHH
Confidence 4 66663 33334 446779999886520 000 000000 1112111111 11111
Q ss_pred HHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769 295 FIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEE 374 (419)
Q Consensus 295 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (419)
+...++..++.....+.+++...+...+..++.+.|.+. |++.. ...+|-.+.+... ....++..+. .+.
T Consensus 337 L~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~~-g~~~~---~~~fF~~~~v~~~-----~~~~~~~~~a-~~~ 406 (954)
T PRK12566 337 LLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEAK-GIKRL---NRHFFDTLTLEVG-----GAQAAIIESA-EAA 406 (954)
T ss_pred HHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhc-CCccc---cCCccceEEEEcc-----CCHHHHHHHH-HHC
Confidence 111222222232346889999999999999999999984 88733 2244544444321 0244555444 556
Q ss_pred CeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769 375 SVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK 409 (419)
Q Consensus 375 gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~ 409 (419)
||-+.--. ++.+.+|+ .++.++++.++..+.
T Consensus 407 ~~n~r~~~----~~~~~~s~de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 407 RINLRILG----RGRLGVSLDETCDEATVARLFDIFL 439 (954)
T ss_pred CCeeEEeC----CCeEEEEeCCCCCHHHHHHHHHHhc
Confidence 88765432 46788888 467899999888873
No 390
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.55 E-value=7.5e-06 Score=74.46 Aligned_cols=317 Identities=13% Similarity=0.093 Sum_probs=166.3
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-------CC-----CeEE-eeCCCCCCcH
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-------PG-----ANVL-LPRPGWPYYE 145 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-------~g-----d~vl-v~~p~~~~~~ 145 (419)
.|...++..-..+.+-....+..|.....+.|+--.|+.+.++...-+--+ .| +-|+ ..+-+|+++.
T Consensus 132 TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~ 211 (510)
T KOG0629|consen 132 TYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIK 211 (510)
T ss_pred eEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecccchhhHH
Confidence 344333333333333333333344444445555545555555554433211 11 3344 3467888899
Q ss_pred HHHhhcCCE---EEEEeccCCCCcccChHHHHHhhcCC-cc-EE-EEeCCC---CccccCCCHHHHHHHHHHHHhCCCeE
Q 014769 146 GIAQRKQVE---VRHFDLLPERNWEVDLDAVEALADKN-TA-AM-VIINPG---NPCGNVFTYHHLQEIAEMARKLRVMV 216 (419)
Q Consensus 146 ~~~~~~g~~---~~~~~~~~~~~~~~~~~~l~~~~~~~-~~-~v-~i~~p~---nptG~~~~~~~l~~i~~~~~~~~~~l 216 (419)
..+..+|+. +..++. +....+.+++|++.+-.. .+ .+ ++++.+ .--|..=| |..++++|.+|++|+
T Consensus 212 kaAa~lg~gtd~c~~v~t--~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDd---L~~iadiC~k~~lWm 286 (510)
T KOG0629|consen 212 KAAAFLGLGTDHCIKVKT--DERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDD---LNGIADICEKHKLWM 286 (510)
T ss_pred HHHHHhccCCceeEEecc--cccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCc---HHHHHHHHHhcCEEE
Confidence 999999954 444443 334579999999876431 11 11 333333 33455544 999999999999999
Q ss_pred EEccccccccc-CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-c-------
Q 014769 217 VADEVYGHLTF-GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-S------- 287 (419)
Q Consensus 217 i~De~~~~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~------- 287 (419)
++|.+|++... ......-+...... + -+..+.+|. ..+.+.++....+.+. +.+...... .
T Consensus 287 HvDAAwGGglLmS~k~R~kl~Giera-~-SvtwnpHK~-~gaplqCsa~l~r~~g-------ll~~Cn~~~A~YLFq~dK 356 (510)
T KOG0629|consen 287 HVDAAWGGGLLMSRKHRHKLTGIERA-N-SVTWNPHKL-MGAPLQCSAFLTREEG-------LLQRCNQMSAIYLFQQDK 356 (510)
T ss_pred EeecccccccccChhhHhhccCcccc-C-ceeecHHHh-hcCcchhhHHHHHHHH-------HHHhhcccchhhhhccCc
Confidence 99999987332 21111112111111 1 234478898 5667888887776532 222222110 0
Q ss_pred -c--c-cCCchHHHHH-----HHHHH--cccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC--CCceEEEEeecCc
Q 014769 288 -I--Y-SDIPTFIQGA-----IPQIL--EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK--PEGSMVTMVKLNP 354 (419)
Q Consensus 288 -~--~-~~~~~~~~~a-----~~~~l--~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~--p~~g~~~~~~~~~ 354 (419)
+ + -+..-..|-. ....| .......+++..+++-+.++++.+.|++.++...+.. |+...+.+-..|+
T Consensus 357 ~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~ 436 (510)
T KOG0629|consen 357 FYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPP 436 (510)
T ss_pred eeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceehhcCCCceEEEeeccCch
Confidence 0 0 0111112211 11111 2222466888899999999999999998766553433 4533333323343
Q ss_pred ccccCCCCHHHH-----------HHHHHHhcCeEeecCCCCC-CCCeEEEEee---cCHHHHHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEF-----------ALKLAKEESVIVTPGIYVG-LKNWLRIAFC---AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 355 ~~~~~~~~~~~~-----------~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~---~~~~~l~~~l~~l~~~~ 412 (419)
... +...+.+. -+.+++ .|-.-..-...+ .++++|+.+. .+.++++.+++.|..+-
T Consensus 437 ~lR-~~~~~~e~~~rL~kVaPkIK~~Mm~-~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dflldEIerlg 507 (510)
T KOG0629|consen 437 SLR-GWQENPERDSRLVKVAPKIKERMMK-KGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFLLDEIERLG 507 (510)
T ss_pred Hhc-cCcccchhhhHHHhhCcHHHHHHHh-ccceeeEecccccccchhheecccchhhhhhHHHHHHHHHHhc
Confidence 211 11111111 122222 233322111111 2578999883 47899999999988754
No 391
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.04 E-value=0.0013 Score=63.47 Aligned_cols=311 Identities=14% Similarity=0.085 Sum_probs=173.1
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cHHHHHHHHHHH----hcCCC----CeEEeeCCCCCCcHHHHhhcCC
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GCKQAVEVILSV----LARPG----ANVLLPRPGWPYYEGIAQRKQV 153 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~~~al~~~~~~----l~~~g----d~vlv~~p~~~~~~~~~~~~g~ 153 (419)
.+|+.++-+.+.++|-..- .-+.+.+-+ ++.++-+..++. +..+| ...++|...|..-...+++.|.
T Consensus 577 aqGY~~lf~~Le~~Lc~iT----G~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~Magm 652 (1001)
T KOG2040|consen 577 AQGYQQLFTELEKDLCEIT----GFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGM 652 (1001)
T ss_pred HhhHHHHHHHHHHHhheee----cccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCChhhHHhcCC
Confidence 4788888888888775532 335665543 333333332222 32333 2456777788877888999999
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcCC---ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI 230 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~ 230 (419)
+++.+.++.. ..+|..+|+...+.. -.++.++-|+.- |+ =++.+++++++.++||.-+..|.+--.-..+-.
T Consensus 653 kvvpV~~~~~--G~id~~dLk~kaekh~~~Laa~MvTYPST~-Gv--fE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc 727 (1001)
T KOG2040|consen 653 KVVPVGCDAN--GNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GV--FEEGIDDICDIIHEHGGQVYLDGANMNAQVGLC 727 (1001)
T ss_pred EEEEeeccCC--CCccHHHHHHHHHHhhhhhheeEEeccccc-cc--ccccHHHHHHHHHhcCCEEEecCCCccceeccc
Confidence 9999988644 468999998776543 345666666542 32 234589999999999999999986543222111
Q ss_pred CCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCCC-CccchhhHHHHHHh--------hhccccCC--chH
Q 014769 231 PYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDPN-GIFQKSGIIDSIKD--------CLSIYSDI--PTF 295 (419)
Q Consensus 231 ~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~~-~~~~~~~~~~~l~~--------~~~~~~~~--~~~ 295 (419)
. ...++.+ +.=--++|.|..| |..+|=+.+...- ..+-...++.-.+. .....++. -.+
T Consensus 728 ~---pGd~GaD---V~HLNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILp 801 (1001)
T KOG2040|consen 728 R---PGDIGAD---VCHLNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILP 801 (1001)
T ss_pred C---Ccccccc---ceeecccceeeecCCCCCCCCCccchhhhccccCCCCCccCCCCCCCCCCccceeccCCCcceeeh
Confidence 1 1122222 2222466766543 5556666554310 00000011111000 00001111 112
Q ss_pred HHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769 296 IQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--SMVTMVKLNPWLLEDINDDIEFALKLAKE 373 (419)
Q Consensus 296 ~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 373 (419)
..++..+++.. ..+........-+.+++..+|+.+-.+- +..+.+ +.-+.+++.+.+.....++.+++.+| .+
T Consensus 802 ISwaYikmMG~---~GL~~as~~AiLNaNYMakRLe~hYkil-~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL-~D 876 (1001)
T KOG2040|consen 802 ISWAYIKMMGS---GGLKDASKIAILNANYMAKRLESHYKIL-FRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRL-MD 876 (1001)
T ss_pred hHHHHHHHhcc---cccchhhHHHhhhhHHHHHHHhhcccee-EecCCcceeeeeeeechhhccccCCcHHHHHHHH-Hh
Confidence 33454555543 3455555555667888888888741221 212222 22334455443322223577888777 78
Q ss_pred cCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769 374 ESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 374 ~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~ 414 (419)
+|+.- |.-.|-..+++-|-+. .+.+|+|++++.+-.+-++
T Consensus 877 YgFHa-PTmswPV~gtLMIEPTESE~k~ElDRfcdAliSIreE 918 (1001)
T KOG2040|consen 877 YGFHA-PTMSWPVAGTLMIEPTESEDKAELDRFCDALISIREE 918 (1001)
T ss_pred ccCCC-CccccccCCceEeccCccccHHHHHHHHHHHHHHHHH
Confidence 99975 5555556788888884 4568999988887655443
No 392
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=97.87 E-value=0.0091 Score=52.57 Aligned_cols=323 Identities=14% Similarity=0.050 Sum_probs=175.1
Q ss_pred ChHHHHHHHHHHHhCC-CCCCC-------CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC
Q 014769 60 TAVEAEDAIVDAVRSG-KFNCY-------ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG 131 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~-~~~~Y-------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g 131 (419)
.|+..+..+.+.++.. ...-| +...+....-..++... +...++|.+.++-|..+..++.++-+|-
T Consensus 79 mPK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~l~~~iV------GA~e~EvavmNsLTvNlh~Ll~sFyKPT 152 (465)
T KOG3846|consen 79 MPKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILPLLAPIV------GAQENEVAVMNSLTVNLHSLLISFYKPT 152 (465)
T ss_pred CchhhHhHHHHHHHHHHhhhhhcccccccceeecchhhhhhhhhhc------cCCchhhhhHhhhhhHHHHHHHHhcCCc
Confidence 4556666666555431 11112 22233444455555554 5678899999999999999999997764
Q ss_pred ---CeEEeeCCCCCC----cHHHHhhcCCEEE--EEeccC-CCCcccChHHHHHhhcCCc---cEEEEeCCCCccccCCC
Q 014769 132 ---ANVLLPRPGWPY----YEGIAQRKQVEVR--HFDLLP-ERNWEVDLDAVEALADKNT---AAMVIINPGNPCGNVFT 198 (419)
Q Consensus 132 ---d~vlv~~p~~~~----~~~~~~~~g~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~---~~v~i~~p~nptG~~~~ 198 (419)
-+|+.+.-.|++ +...++..|..+. .+-+.| ++...+..+++.+.+..+. ..|+++..+.-||+.++
T Consensus 153 ekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fd 232 (465)
T KOG3846|consen 153 EKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFD 232 (465)
T ss_pred chhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEecccccccchhHHHHHHHHHhcCCeEEEEEeecceeecccccc
Confidence 468888777664 3455666676542 122223 2334566777777776543 33455566899999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~ 277 (419)
+.+|...-+..|.++=.|-+++. |.-+..+..++. .+.+++--|.+ .+| -.+|-+.+.+...- +
T Consensus 233 ---i~aIT~Agq~kgc~VGfDLAHAv----gNVpL~LHdWgV---DFACWCSYKYl-naGaGgIgGlFvHekh~~----~ 297 (465)
T KOG3846|consen 233 ---IGAITFAGQFKGCLVGFDLAHAV----GNVPLQLHDWGV---DFACWCSYKYL-NAGAGGIGGLFVHEKHTK----E 297 (465)
T ss_pred ---hhhhhhcccCCCcEechhhhhhh----cCCceEEeecCC---ceEEEeeeccc-ccCCCccceeeeehhhhc----c
Confidence 77777666667889999999886 222222333444 37788878873 443 23555555432111 1
Q ss_pred HHHHHHhhh---------------------cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 278 IIDSIKDCL---------------------SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 278 ~~~~l~~~~---------------------~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
...++..+. .+ -+.++.....++..-|+--..-.+++.+.+-.-...++...++...|
T Consensus 298 ~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g 377 (465)
T KOG3846|consen 298 SLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKG 377 (465)
T ss_pred hhhHHhhhccCCcchhhhhccccccCccccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcc
Confidence 122222111 11 11233333333322222111112333332222222333333332111
Q ss_pred -----------CCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cC
Q 014769 336 -----------ISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AE 397 (419)
Q Consensus 336 -----------~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~ 397 (419)
+. ..+| +.|.-+.+.+.. +...+..+| .++|+..-- ..++.+|+++. .+
T Consensus 378 ~~~~~rt~Kl~~~-IiTP~~~~erGcQLsl~Fss-------p~~~vfqeL-~krGv~~Dk----R~PNvIRvAPvpLYN~ 444 (465)
T KOG3846|consen 378 YKHPLRTEKLFFT-IITPTSTDERGCQLSLYFSS-------PTPKVFQEL-HKRGVIGDK----RRPNVIRVAPVPLYNT 444 (465)
T ss_pred cCchhhhcceeEE-EeCCcccccccceEEEEeCC-------CchHHHHHH-HHcCeeccc----cCCCceEeecchhhcc
Confidence 11 1122 235555555542 223444455 677987532 12678999984 36
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 014769 398 PSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~~~ 416 (419)
-.++..+++.|.++.....
T Consensus 445 f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 445 FSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred HHHHHHHHHHHHHHHHHhh
Confidence 6899999999998887654
No 393
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=97.77 E-value=0.00022 Score=61.03 Aligned_cols=302 Identities=15% Similarity=0.162 Sum_probs=145.0
Q ss_pred hCCCCCCCCcEEEcccHHHHHHHHHHHhc--CCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHH
Q 014769 100 DLPYKLSADDVYVTLGCKQAVEVILSVLA--RPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEA 175 (419)
Q Consensus 100 ~~~~~~~~~~i~~t~g~~~al~~~~~~l~--~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~ 175 (419)
..|.+.-.+.+++--.+-..+...+.++. +|. .-|+.+.-.-.+.....-..|+++..+.-..+ +....|++.++.
T Consensus 69 l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~agfepiiie~i~d~d~l~tdleav~~ 148 (432)
T KOG3843|consen 69 LAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHAGFEPIIIENILDGDELITDLEAVEA 148 (432)
T ss_pred HhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHHHHHHhcCCCceeeeccccchHHHHhHHHHHH
Confidence 34555545555553333334555555554 343 34444443333344455567888766553322 234457888877
Q ss_pred hhcCC-ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCc
Q 014769 176 LADKN-TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKR 253 (419)
Q Consensus 176 ~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~ 253 (419)
.+.+. ...++..+-....=..-+++.+++|..+|..|++.-++..+|+.-.-. -..-+..-..-++ ..++.|+-|.
T Consensus 149 ~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee--~i~~iaa~~~~grida~vqsldkn 226 (432)
T KOG3843|consen 149 IIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEE--CIHKIAAAAECGRIDAFVQSLDKN 226 (432)
T ss_pred HHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHH--HHHHHHHHhhhccHHHHHHHhhhc
Confidence 77653 333332222111111235678999999999999999999999742100 0000111111111 2456789999
Q ss_pred CCCCCceeE-EEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHH---HH---HHHHHHHHHHHHH
Q 014769 254 WLVPGWRFG-WLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDF---FC---KLIDTLRESAEIC 326 (419)
Q Consensus 254 ~~~~G~r~G-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~---~~---~~~~~~~~~~~~l 326 (419)
|..| +| .+++ . ++ ..+++.+.+... .-..+.++...+..+|..+...+ +. ++...++.....+
T Consensus 227 f~vp---vggaiia-~----fk-~n~iq~iak~yp-grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~~ 296 (432)
T KOG3843|consen 227 FMVP---VGGAIIA-A----FK-DNFIQEIAKMYP-GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIKF 296 (432)
T ss_pred ceee---cchhHhh-H----hH-HHHHHHHHHhCC-CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8766 33 3332 1 11 134444443322 11223334444455555443322 22 2233333333333
Q ss_pred HHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe---EeecCCCC------------CC-----
Q 014769 327 YDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV---IVTPGIYV------------GL----- 386 (419)
Q Consensus 327 ~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv---~v~~g~~~------------~~----- 386 (419)
.+.+.+ .....|+....+-+.+..... ....+..+....|..+|| .|+|.+.. +.
T Consensus 297 ae~~~e----~l~~~p~n~is~amtl~ti~~-~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~ 371 (432)
T KOG3843|consen 297 AEAIGE----CLLETPENEISLAMTLKTIDE-AKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQ 371 (432)
T ss_pred HHHhhh----hhhcCCCchhhhhhhhccCCh-HHhhHHHHHHHHHHhccccCceEeeccccceeeeceEEeccccccCcC
Confidence 444333 112345544333332321100 000123344445555565 34444322 11
Q ss_pred -CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 387 -KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 387 -~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
-.|+-+.+ +.+..++++++++|...+..++++
T Consensus 372 ~~~yln~a~aigm~~hdld~~~~rl~~~~a~~~ke 406 (432)
T KOG3843|consen 372 HCAYLNAACAIGMKDHDLDEFFNRLDRCLAAFRKE 406 (432)
T ss_pred chhHhhHHHhcCCcHhHHHHHHHHHHHHHHHHHHH
Confidence 12344443 457789999999999988777653
No 394
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=97.75 E-value=0.0052 Score=53.46 Aligned_cols=334 Identities=16% Similarity=0.124 Sum_probs=173.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC----CCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF----NCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
...++||+-|- . ..+.+.+.++-.+.+.-... ..-+ .+.-...+.+.....+.+.+.++-+-+-+++-.|
T Consensus 5 ~~~vvnFaaGP-A----klp~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~vlf~QGG 79 (370)
T KOG2790|consen 5 PERVVNFAAGP-A----KLPESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYKVLFLQGG 79 (370)
T ss_pred ccceeecCCCc-c----cCCHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCceeEEEEeCC
Confidence 66789999993 2 22334444444444432110 0000 0112233333333334443444444444566788
Q ss_pred HHHHHHHHHHHhcC--CC---CeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCCC-CcccChHHHHHhhcCCccEEEEeC
Q 014769 116 CKQAVEVILSVLAR--PG---ANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPER-NWEVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 116 ~~~al~~~~~~l~~--~g---d~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
+|+-+.++...|+. .| |-|+.-..+--.+.. ++.+|.. .+..+..... +--+|.+.++. +++.+.|++|.
T Consensus 80 Gt~qFaAv~lNL~glK~g~~AdYiVTGsWS~KA~~E-Akk~~~~~~V~~~~k~y~ygkvPd~~~w~~--~~da~yvyyCa 156 (370)
T KOG2790|consen 80 GTGQFAAVPLNLIGLKHGRCADYVVTGSWSAKAAEE-AKKYGTPNIVIPKLKSYTYGKVPDPSTWEL--NPDASYVYYCA 156 (370)
T ss_pred CcccccccchhhhccccCCccceEEeccccHHHHHH-HHhhCCceEEeccccccccCcCCChhhccc--CCCccEEEEec
Confidence 88888887777763 34 444433333333333 3445544 3333322111 11244444433 23455677775
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
-..--|+-++ .+- +-..++.++|.|-...++. .+..+..+ -+++.+..|.+|.+| +-.++.++
T Consensus 157 NETVHGVEf~-----~~P-~~~~~~~vlVaDmSSnflS----rpvDvsk~-----gvi~aGAQKN~G~aG--~Tvvivr~ 219 (370)
T KOG2790|consen 157 NETVHGVEFD-----FIP-VNDPKGAVLVADMSSNFLS----RPVDVSKF-----GVIFAGAQKNVGPAG--VTVVIVRK 219 (370)
T ss_pred CceeeceecC-----CCC-CCCCCCceEEEecccchhc----CCccchhc-----ceEEeccccccCccc--cEEEEEeh
Confidence 4334455433 111 1224577888887665432 12222222 266778899988888 44555554
Q ss_pred CCCccchhhHHHHHHhh-------------hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 269 PNGIFQKSGIIDSIKDC-------------LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~-------------~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
+++...... .+...+++....++...+++... ...++.+...-.+..+.+++.|.+..
T Consensus 220 --------dllg~~~~~tP~v~dyk~~~~NnSlyNTpP~f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~ 291 (370)
T KOG2790|consen 220 --------DLLGNALDITPSVLDYKIMDKNNSLYNTPPCFGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSN 291 (370)
T ss_pred --------hhhcccccCCccccceeeeccccccccCCCeeeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcC
Confidence 233222211 12345566666665555555432 34567777777788899999998754
Q ss_pred CCC-CCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769 335 CIS-CPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK 409 (419)
Q Consensus 335 ~~~-~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~ 409 (419)
|+. |...|. +-|-+.+++.+. .-..+|..+..+++=|.+ -|. ..-+.+|-|+ +.+-++.+.+++-++
T Consensus 292 gfy~cpVe~~~RS~MNV~Fri~~d-----~Le~eFLkeA~~~~mv~L-KGh--RSVGGiRASlYNAisv~~~q~L~~~m~ 363 (370)
T KOG2790|consen 292 GFYRCPVEPSVRSRMNVPFRIEKD-----ELEAEFLKEAAKEHMVQL-KGH--RSVGGIRASLYNAISVEEVQKLAAFMK 363 (370)
T ss_pred CeEEcccchhhhhhcccceeecch-----HHHHHHHHHHHHhhhhcc-ccc--cccccchhhhhccccHHHHHHHHHHHH
Confidence 543 333343 234555566532 124567777655543333 332 2346789999 578888888888887
Q ss_pred HHHHHH
Q 014769 410 AFCQRH 415 (419)
Q Consensus 410 ~~~~~~ 415 (419)
++.+.+
T Consensus 364 ~F~k~h 369 (370)
T KOG2790|consen 364 EFQKKH 369 (370)
T ss_pred HHHHhc
Confidence 776654
No 395
>PLN02672 methionine S-methyltransferase
Probab=96.95 E-value=0.026 Score=59.65 Aligned_cols=214 Identities=11% Similarity=0.050 Sum_probs=125.6
Q ss_pred HHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc------CCCCeEEeeCC
Q 014769 66 DAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA------RPGANVLLPRP 139 (419)
Q Consensus 66 ~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~------~~gd~vlv~~p 139 (419)
..+...+.+..+..|.++.|...+|..||.|++..+++++++++|++.++-..|++.+++.+. +.+.+-.++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 485 (1082)
T PLN02672 408 AYLASALKGLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLP-- 485 (1082)
T ss_pred HHHHHHHccCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCC--
Confidence 444555566666789999999999999999999999999999999999999999998888763 222111111
Q ss_pred CCCCcHHHHhhcC--------CEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769 140 GWPYYEGIAQRKQ--------VEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 140 ~~~~~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 210 (419)
..|...+...| ..+..+.-+. .-+.+.++++. ++++|+..-.. +-..+...++.|.+.++
T Consensus 486 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 554 (1082)
T PLN02672 486 --KKWLTSLAIENATSDSKSDDVITVIEAPR------QSDLVIELIKKLKPQVVVTGMAD---FEMRTSTAFEHLLNVTA 554 (1082)
T ss_pred --HHHHhHhhhhcccccCccCCeEEEEeCCC------cchHHHHHHHhCCCeEEEEeccc---hhhhhHHHHHHHHHHHH
Confidence 11222222222 2222222111 12344455544 34444432222 22345566899999999
Q ss_pred hCCCeEEEcccccccccCCCCCCCc----cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh
Q 014769 211 KLRVMVVADEVYGHLTFGSIPYTPM----GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (419)
Q Consensus 211 ~~~~~li~De~~~~~~~~~~~~~~~----~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~ 286 (419)
+.|..++.|..-..-.....+...+ ..-....+..++-++-|.--.+.+-+.+++.-+. .+...+....
T Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 627 (1082)
T PLN02672 555 EIGARLFLDISDHLELSSLPGSNGVLKYLAGHPLPSHAAIICGLVKNQVYSDLEVAFVISENE-------AVLKALSKTG 627 (1082)
T ss_pred hhCcEEEEehhhheeeccCCCcccHHHHhcCCCCCcchhHhhhhhhccccccceEEEEecCcH-------HHHHHHHHHH
Confidence 9999999998654322111111111 1111112334444688886678999999986442 3555555443
Q ss_pred cc-ccCCchHHHHH
Q 014769 287 SI-YSDIPTFIQGA 299 (419)
Q Consensus 287 ~~-~~~~~~~~~~a 299 (419)
.. .+..+...|+-
T Consensus 628 ~~~~~~~~~~~~~~ 641 (1082)
T PLN02672 628 EVLEGRTAIISQFY 641 (1082)
T ss_pred HhhccchHHHHHHH
Confidence 22 34445555543
No 396
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=96.42 E-value=0.91 Score=44.69 Aligned_cols=311 Identities=13% Similarity=0.154 Sum_probs=149.8
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH----HHHH---HHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cC
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA----IADY---LSRDLPYKLSADDVYVTLGCKQAVEVILSVL-AR 129 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~----ia~~---l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~ 129 (419)
.-+|+.+++-+.+.. +++.+|.|.+ +++.+- +-.| +...- +++-.+.-+-.-+|++-++...+. ..
T Consensus 130 ~~vP~~I~RNilenp--~W~TqYTPYQ--~EIsQGRLEsllNyQTmi~dlT--GL~~aNASLLDEgTAaaEAm~l~~~~~ 203 (1001)
T KOG2040|consen 130 THVPAVILRNILENP--GWYTQYTPYQ--AEISQGRLESLLNYQTMITDLT--GLPMANASLLDEGTAAAEAMALCNRIN 203 (1001)
T ss_pred ccCcHHHHHHhhhCC--cceeccCCCc--hhhhhhhHHHHhhhHHhhhhcc--CCcccchhhhccchhHHHHHHHHHhhc
Confidence 345666666554432 4566788743 232221 1111 11111 344445444334444444433332 34
Q ss_pred CCCeEEeeCCCCCCcHHHHhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769 130 PGANVLLPRPGWPYYEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (419)
Q Consensus 130 ~gd~vlv~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 207 (419)
+..+.++..-+|+.....++-. ++.+...- .|+++.... ..+...+++.-|.. -|.+.+ ..++++
T Consensus 204 krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~--------~~~~~~~~s-~~~v~gvlvQYP~t-~G~i~d---~~el~~ 270 (1001)
T KOG2040|consen 204 KRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVV--------SDIKEADYS-SKDVSGVLVQYPDT-EGSVLD---FDELVE 270 (1001)
T ss_pred ccceEEecCCCCcchhhhhhccccccceeEEe--------cCHHHhhcc-ccceeEEEEEcCCC-CCcccC---HHHHHH
Confidence 5677999999998765544321 22222111 122222111 11334455555554 677777 788888
Q ss_pred HHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC----CceeEEEEeeCC-------------C
Q 014769 208 MARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP----GWRFGWLVTNDP-------------N 270 (419)
Q Consensus 208 ~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~----G~r~G~~~~~~~-------------~ 270 (419)
.+++++..+++-.- .+... -..+...++.+ |.++|.... |.| |.-.||++++++ .
T Consensus 271 ~a~~~~s~vv~atD--LLaLt--iLrpPgefGaD---IavGSsQRF-GVPlGYGGPHAaFfAv~~~l~R~mPGRiiGvtk 342 (1001)
T KOG2040|consen 271 LAHANGSLVVMATD--LLALT--ILRPPGEFGAD---IAVGSSQRF-GVPLGYGGPHAAFFAVSESLVRMMPGRIIGVTK 342 (1001)
T ss_pred HhhccCceEEEeeh--hhHHH--ccCChhhcCce---eeecccccc-CccccCCCchHHHHHHHHHHHhhCCCceEeeee
Confidence 88898877654211 11100 11122344443 777775553 543 222333333211 0
Q ss_pred CccchhhHHHHHHhhhc-c---ccCCchH-HHHHHHH---HHcc-cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769 271 GIFQKSGIIDSIKDCLS-I---YSDIPTF-IQGAIPQ---ILEK-TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK 341 (419)
Q Consensus 271 ~~~~~~~~~~~l~~~~~-~---~~~~~~~-~~~a~~~---~l~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 341 (419)
....+..+.-+++...+ . -.+.|.- +|+.++. ++.- .....++++.+++......+...|+.. |.++.
T Consensus 343 D~~gk~a~RLALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~-- 419 (1001)
T KOG2040|consen 343 DALGKEAYRLALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQ-- 419 (1001)
T ss_pred cccccHHHHHHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhc--
Confidence 00111112222221110 0 0111111 2221111 1111 225788999999999999999999876 55522
Q ss_pred CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK 409 (419)
Q Consensus 342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~ 409 (419)
.-.+|-.+++... .+..++..+.++ ++|-+.- ..++.+=+++ ..++++++.++..+.
T Consensus 420 -~k~fFDTLkI~~~-----~s~~~~l~rA~~-~~iNlr~----~ed~tigvslDETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 420 -HKPFFDTLKIRCG-----CSAEEVLDRAAK-RQINLRL----VEDGTIGVSLDETVTEKDVDDLLWVFN 478 (1001)
T ss_pred -cccccceEEEEec-----CcHHHHHHHHHh-hcCceEE----eecCceEEeecccccHHHHHHHHHHHc
Confidence 2236666655432 145666666644 4554432 1256778888 457889998887765
No 397
>PRK10595 SOS cell division inhibitor; Provisional
Probab=90.47 E-value=6.6 Score=32.02 Aligned_cols=103 Identities=13% Similarity=0.035 Sum_probs=66.9
Q ss_pred cEEEc---ccHHH-HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 109 DVYVT---LGCKQ-AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 109 ~i~~t---~g~~~-al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+|+.. +|-.+ .+.=++..+...+..|+...|-+..+...+...|++...+-.....+..-.+..++++++.+...+
T Consensus 30 Ell~~~~qpg~~e~LLlP~L~~l~~~~rwilwI~PP~~p~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~a 109 (164)
T PRK10595 30 ELVYREDQPMMTQLLLLPLLQQLGQQSRWQLWLTPQQKLSREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSV 109 (164)
T ss_pred EEeecCCCchHHHHHHHHHHHHHhccCceEEEECCCCCCCHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcE
Confidence 55664 44444 333333334456788888999999999999999987654443222221224567788998888888
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (419)
++....+ .++.+++++|--.+++.+.+
T Consensus 110 VL~Wlp~----~l~~~~~RRLQlAAe~g~~l 136 (164)
T PRK10595 110 VLGWLPD----ELTEEEHARLVDAAQEGNAM 136 (164)
T ss_pred EEECCcc----cCCHHHHHHHHHHHHhCCCE
Confidence 8887431 25677788888777776653
No 398
>TIGR00623 sula cell division inhibitor SulA. All proteins in this family for which the functions are known are cell division inhibitors. In E. coli, SulA is one of the SOS regulated genes.
Probab=88.78 E-value=7.7 Score=31.68 Aligned_cols=85 Identities=11% Similarity=0.024 Sum_probs=59.2
Q ss_pred HhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC-CCCccccCCCHHHHHH
Q 014769 126 VLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGNVFTYHHLQE 204 (419)
Q Consensus 126 ~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~-p~nptG~~~~~~~l~~ 204 (419)
.+...+..|+...|-+..+...+...|++...+-+.....-.-.+...+++++.....+++++ |+. ++.+++++
T Consensus 55 ~Ls~~~Rwlv~IaPP~~~~~~~L~~~Gl~l~rvlli~~~~~~d~lwa~EQaLrSG~c~aVL~WLp~~-----l~~~~lRR 129 (168)
T TIGR00623 55 QLGQQSRWQLWLTPQQKLSKEWVQSSGLPLTKVMQISQLSPCNTVESMIRALRTGNYSVVIGWLTDE-----LTEEEHAK 129 (168)
T ss_pred HhcccCceEEEECCCCccCHHHHHHcCCChhHEEEEecCCchhHHHHHHHHHHhCCCcEEEecCCcc-----CCHHHHHH
Confidence 334467788888888888899999999886554332211112346788999998888888888 533 66777888
Q ss_pred HHHHHHhCCCe
Q 014769 205 IAEMARKLRVM 215 (419)
Q Consensus 205 i~~~~~~~~~~ 215 (419)
|--.+...+.+
T Consensus 130 LqlAA~~G~al 140 (168)
T TIGR00623 130 LVRAAEEGNAM 140 (168)
T ss_pred HHHHHHhCCCe
Confidence 87777766554
No 399
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=83.42 E-value=13 Score=31.84 Aligned_cols=99 Identities=16% Similarity=0.215 Sum_probs=63.8
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeE---EeeCCCCC-----------CcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANV---LLPRPGWP-----------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~v---lv~~p~~~-----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (419)
-+.+-+|+..++.++..++.. |-.| +...|.-. .....++..|+++......- ...-..++|.
T Consensus 3 ~~aL~SGGKDS~~Al~~a~~~-G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g--~~e~eve~L~ 79 (223)
T COG2102 3 VIALYSGGKDSFYALYLALEE-GHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSG--EEEREVEELK 79 (223)
T ss_pred EEEEEecCcHHHHHHHHHHHc-CCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCc--cchhhHHHHH
Confidence 367789999998888887753 3222 22222111 12345667788877766432 1223567777
Q ss_pred HhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 175 ALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 175 ~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
.+++. +...|+ +|.+.+..+..++-.+|++.|+-++
T Consensus 80 ~~l~~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~ 116 (223)
T COG2102 80 EALRRLKVDGIV-------AGAIASEYQKERVERLCEELGLKVY 116 (223)
T ss_pred HHHHhCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEe
Confidence 77664 222343 7999999999999999999988655
No 400
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=73.41 E-value=39 Score=30.84 Aligned_cols=38 Identities=18% Similarity=0.234 Sum_probs=28.7
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 224 (419)
++.+.+=|.| ++.+...+|+++|++.+..++.|..-..
T Consensus 133 VvlsGSlP~g--~~~d~y~~li~~~~~~g~~vilD~Sg~~ 170 (310)
T COG1105 133 VVLSGSLPPG--VPPDAYAELIRILRQQGAKVILDTSGEA 170 (310)
T ss_pred EEEeCCCCCC--CCHHHHHHHHHHHHhcCCeEEEECChHH
Confidence 4444444554 4678999999999999999999976543
No 401
>TIGR00262 trpA tryptophan synthase, alpha subunit. Tryptophan synthase catalyzes the last step in the biosynthesis of tryptophan. The alpha chain is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. In bacteria and plants each domain is found on a separate subunit (alpha and beta chains), while in fungi the two domains are fused together on a single multifunctional protein. The signature pattern for trpA contains three conserved acidic residues. [LIVM]-E-[LIVM]-G-x(2)-[FYC]-[ST]-[DE]-[PA]-[LIVMY]-[AGLI]-[DE]-G and this is located between residues 43-58 of the model. The Sulfolobus solfataricus trpA is known to be quite divergent from other known trpA sequences.
Probab=72.48 E-value=70 Score=28.44 Aligned_cols=157 Identities=15% Similarity=0.134 Sum_probs=80.2
Q ss_pred CCCeeeccCC--CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc-HH
Q 014769 41 PRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG-CK 117 (419)
Q Consensus 41 ~~~~i~l~~g--~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g-~~ 117 (419)
|-++|-+++- ||..+ -|.++++..+++.++.. ....-++-+++.+.. . .+.-......+- =.
T Consensus 37 Gad~iElGiPfsDP~aD-----GpvIq~a~~~al~~G~~-----~~~~~~~v~~ir~~~---~--~~plv~m~Y~Npi~~ 101 (256)
T TIGR00262 37 GADALELGVPFSDPLAD-----GPTIQAADLRALRAGMT-----PEKCFELLKKVRQKH---P--NIPIGLLTYYNLIFR 101 (256)
T ss_pred CCCEEEECCCCCCCCCc-----CHHHHHHHHHHHHcCCC-----HHHHHHHHHHHHhcC---C--CCCEEEEEeccHHhh
Confidence 8888887775 44332 37788888888765421 112223333333220 1 121122222222 12
Q ss_pred HHHHHHHHHhcCCC-CeEEeeCCCCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 118 QAVEVILSVLARPG-ANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 118 ~al~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
.++...+..+.+-| |.|++++-.+.. +...++..|.....+- .| ..+.+.+..........+++++-+.-|
T Consensus 102 ~G~e~f~~~~~~aGvdgviipDlp~ee~~~~~~~~~~~gl~~i~lv-~P----~T~~eri~~i~~~~~gfiy~vs~~G~T 176 (256)
T TIGR00262 102 KGVEEFYAKCKEVGVDGVLVADLPLEESGDLVEAAKKHGVKPIFLV-AP----NADDERLKQIAEKSQGFVYLVSRAGVT 176 (256)
T ss_pred hhHHHHHHHHHHcCCCEEEECCCChHHHHHHHHHHHHCCCcEEEEE-CC----CCCHHHHHHHHHhCCCCEEEEECCCCC
Confidence 34555556665555 888888765532 3445566777755332 12 134566665555444466666555677
Q ss_pred ccC--CCHHHHHHHHHHHHhC-CCeEEE
Q 014769 194 GNV--FTYHHLQEIAEMARKL-RVMVVA 218 (419)
Q Consensus 194 G~~--~~~~~l~~i~~~~~~~-~~~li~ 218 (419)
|.. ++.+ +.+.++.++++ +..+++
T Consensus 177 G~~~~~~~~-~~~~i~~lr~~~~~pi~v 203 (256)
T TIGR00262 177 GARNRAASA-LNELVKRLKAYSAKPVLV 203 (256)
T ss_pred CCcccCChh-HHHHHHHHHhhcCCCEEE
Confidence 774 4444 44555555543 444444
No 402
>cd06568 GH20_SpHex_like A subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the N-acetylhexosaminidase from Streptomyces plicatus (SpHex). SpHex catalyzes the hydrolysis of N-acetyl-beta-hexosaminides. An Asp residue within the active site plays a critical role in substrate-assisted catalysis by orienting the 2-acetamido group and stabilizing the transition state. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself. Proteins belonging to this subgroup lack the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases.
Probab=71.81 E-value=8.9 Score=35.56 Aligned_cols=70 Identities=17% Similarity=0.355 Sum_probs=46.5
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.+.+...++++..+.+..+.+|.+..+...++-..... .....+.|-.++.+++++|++.|+++|+-||-
T Consensus 24 id~ma~~KlN~lhlHLtD~~~~rle~~~~P~lt~~ga~----~~~~~~~~~~YT~~di~elv~yA~~rgI~vIP 93 (329)
T cd06568 24 IDLLALYKLNVLHLHLTDDQGWRIEIKSWPKLTEIGGS----TEVGGGPGGYYTQEDYKDIVAYAAERHITVVP 93 (329)
T ss_pred HHHHHHhCCcEEEEEeecCCcceeeecCcccccccccc----cccCCCCCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 34556667888888887666777765554333211111 11223556679999999999999999987663
No 403
>PF04392 ABC_sub_bind: ABC transporter substrate binding protein; InterPro: IPR007487 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. This family contains many hypothetical proteins and some ABC transporter substrate binding proteins.; PDB: 3LFT_A 3LKV_A.
Probab=71.01 E-value=24 Score=32.02 Aligned_cols=143 Identities=18% Similarity=0.245 Sum_probs=66.1
Q ss_pred hHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769 61 AVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~v 134 (419)
...+.+.+.+.+....+.. |....|..+.-..+++.+.. ..-+++++.|+.++.... ..+... -.|
T Consensus 13 ~~~~~~gf~~~L~~~g~~~~~~~~~~~~a~~d~~~~~~~~~~l~~------~~~DlIi~~gt~aa~~~~-~~~~~~-iPV 84 (294)
T PF04392_consen 13 LDDIVRGFKDGLKELGYDEKNVEIEYKNAEGDPEKLRQIARKLKA------QKPDLIIAIGTPAAQALA-KHLKDD-IPV 84 (294)
T ss_dssp HHHHHHHHHHHHHHTT--CCCEEEEEEE-TT-HHHHHHHHHHHCC------TS-SEEEEESHHHHHHHH-HH-SS--S-E
T ss_pred HHHHHHHHHHHHHHcCCccccEEEEEecCCCCHHHHHHHHHHHhc------CCCCEEEEeCcHHHHHHH-HhcCCC-cEE
Confidence 4555666666665432222 34456777766667766632 334688888887775543 444321 234
Q ss_pred E---eeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 135 L---LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 135 l---v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
+ +.+|...++......-|-.+.-+.- .....-.++.+.+.+..-.+..++.+|+.+++ ....+.+.+.+++
T Consensus 85 Vf~~V~dp~~~~l~~~~~~~~~nvTGv~~--~~~~~~~l~l~~~l~P~~k~igvl~~~~~~~~----~~~~~~~~~~a~~ 158 (294)
T PF04392_consen 85 VFCGVSDPVGAGLVDSLDRPGKNVTGVSE--RPPIEKQLELIKKLFPDAKRIGVLYDPSEPNS----VAQIEQLRKAAKK 158 (294)
T ss_dssp EEECES-TTTTTS-S-SSS--SSEEEEEE-----HHHHHHHHHHHSTT--EEEEEEETT-HHH----HHHHHHHHHHHHH
T ss_pred EEEeccChhhhhccccccCCCCCEEEEEC--CcCHHHHHHHHHHhCCCCCEEEEEecCCCccH----HHHHHHHHHHHHH
Confidence 3 2245444433222222233333321 11111223334444433344446677776543 3447888888889
Q ss_pred CCCeEE
Q 014769 212 LRVMVV 217 (419)
Q Consensus 212 ~~~~li 217 (419)
+|+-++
T Consensus 159 ~g~~l~ 164 (294)
T PF04392_consen 159 LGIELV 164 (294)
T ss_dssp TT-EEE
T ss_pred cCCEEE
Confidence 887655
No 404
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=69.15 E-value=91 Score=28.37 Aligned_cols=103 Identities=21% Similarity=0.211 Sum_probs=60.9
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCC--eEEee--CCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGA--NVLLP--RPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd--~vlv~--~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (419)
+...++++|.|-+.+...++.+..+.|. +|++. .|.+.+. ...+...|.++..+. | .++-..++
T Consensus 117 i~dg~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~~ak~L~~~gI~~~~I~---------D-sa~~~~~~ 186 (301)
T COG1184 117 IHDGDVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRIMAKELRQSGIPVTVIV---------D-SAVGAFMS 186 (301)
T ss_pred ccCCCEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHHHHHHHHHcCCceEEEe---------c-hHHHHHHH
Confidence 4567899999988888888888877775 55555 4777654 344566787776654 2 12222222
Q ss_pred CCccEEEEe-CCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 179 KNTAAMVII-NPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 179 ~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+...|++- ..----|.++++---..|+..|++.+.++++
T Consensus 187 -~vd~VivGad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 187 -RVDKVLVGADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred -hCCEEEECccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 22333332 1111123444444446777888888886554
No 405
>cd02742 GH20_hexosaminidase Beta-N-acetylhexosaminidases of glycosyl hydrolase family 20 (GH20) catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. These enzymes are broadly distributed in microorganisms, plants and animals, and play roles in various key physiological and pathological processes. These processes include cell structural integrity, energy storage, cellular signaling, fertilization, pathogen defense, viral penetration, the development of carcinomas, inflammatory events and lysosomal storage disorders. The GH20 enzymes include the eukaryotic beta-N-acetylhexosaminidases A and B, the bacterial chitobiases, dispersin B, and lacto-N-biosidase. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by the solvent or the enzyme, but by the substrate itself.
Probab=67.17 E-value=13 Score=34.09 Aligned_cols=69 Identities=26% Similarity=0.513 Sum_probs=45.2
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.+.+...+.++..+.+..+.+|.+..+...++-..... .++ .+.+-.++.+++++|++.|+++|+-||-
T Consensus 22 id~ma~~K~N~lhlHl~D~~~~~le~~~~p~l~~~g~~----~~~-~~~~~~yT~~di~elv~yA~~rgI~viP 90 (303)
T cd02742 22 IDVLARYKINTFHWHLTDDQAWRIESKKFPELAEKGGQ----INP-RSPGGFYTYAQLKDIIEYAAARGIEVIP 90 (303)
T ss_pred HHHHHHhCCcEEEEeeecCCCceEeeCccchhhhhccc----ccC-CCCCCeECHHHHHHHHHHHHHcCCEEEE
Confidence 34456677888888877666677765554443221111 111 2345579999999999999999987663
No 406
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=66.53 E-value=97 Score=27.70 Aligned_cols=155 Identities=12% Similarity=0.187 Sum_probs=85.1
Q ss_pred CCCeeeccCC--CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH--
Q 014769 41 PRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC-- 116 (419)
Q Consensus 41 ~~~~i~l~~g--~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~-- 116 (419)
|-++|-+++- ||-.+ -|.++++..+++.++. .. ..+-+.+.+.- +...+ -=|+.|---
T Consensus 42 Gad~iElGiPfSDP~aD-----GpvIq~a~~rAL~~g~----~~----~~~~~~~~~~r-~~~~~----p~vlm~Y~N~i 103 (263)
T CHL00200 42 GADIIELGIPYSDPLAD-----GPIIQEASNRALKQGI----NL----NKILSILSEVN-GEIKA----PIVIFTYYNPV 103 (263)
T ss_pred CCCEEEECCCCCCCCcc-----CHHHHHHHHHHHHcCC----CH----HHHHHHHHHHh-cCCCC----CEEEEecccHH
Confidence 7787777665 33322 3677788777776532 11 22333333321 11111 113333211
Q ss_pred -HHHHHHHHHHhcCCC-CeEEeeCCCCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCC
Q 014769 117 -KQAVEVILSVLARPG-ANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGN 191 (419)
Q Consensus 117 -~~al~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~n 191 (419)
..++...+..+.+-| |.|++++-.+.. +...++..|+....+-- |. .+.+.++...+.....|++++-..
T Consensus 104 ~~~G~e~F~~~~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~-Pt----T~~eri~~i~~~a~gFIY~vS~~G 178 (263)
T CHL00200 104 LHYGINKFIKKISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIA-PT----SSKSRIQKIARAAPGCIYLVSTTG 178 (263)
T ss_pred HHhCHHHHHHHHHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEEC-CC----CCHHHHHHHHHhCCCcEEEEcCCC
Confidence 224555566666666 899998866643 34566777877665432 21 245666665554455777777666
Q ss_pred ccccCC-CHHHHHHHHHHHHhC-CCeEEE
Q 014769 192 PCGNVF-TYHHLQEIAEMARKL-RVMVVA 218 (419)
Q Consensus 192 ptG~~~-~~~~l~~i~~~~~~~-~~~li~ 218 (419)
.||..- -.+.++++++.++++ +..+.+
T Consensus 179 vTG~~~~~~~~~~~~i~~ir~~t~~Pi~v 207 (263)
T CHL00200 179 VTGLKTELDKKLKKLIETIKKMTNKPIIL 207 (263)
T ss_pred CCCCCccccHHHHHHHHHHHHhcCCCEEE
Confidence 788742 225577788777765 555554
No 407
>PLN02955 8-amino-7-oxononanoate synthase
Probab=62.73 E-value=1.2e+02 Score=29.75 Aligned_cols=133 Identities=14% Similarity=0.120 Sum_probs=75.6
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH-HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhc-----
Q 014769 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC-KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRK----- 151 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~-~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~----- 151 (419)
+.|......++++++..+-+.+ +|++......+..+.. -+-++..+..+.+. +..++.+-+|.....++..+
T Consensus 110 ndYLGL~~~p~v~~a~~~ai~~-yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~-e~all~sSGy~AN~~~i~aL~~~~~ 187 (476)
T PLN02955 110 NDYLGLSSHPTISNAAANAAKE-YGMGPKGSALICGYTTYHRLLESSLADLKKK-EDCLVCPTGFAANMAAMVAIGSVAS 187 (476)
T ss_pred cCccCCCCCHHHHHHHHHHHHH-cCCCCCCcCccccChHHHHHHHHHHHHHHCC-CcEEEECChHHHHHHHHHHHhhccc
Confidence 4677777789999999998865 7776666665554433 34466666666654 45556666776443333322
Q ss_pred ----------CCEEEEEeccCCCCcccChHHHHHhhc--C-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 152 ----------QVEVRHFDLLPERNWEVDLDAVEALAD--K-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 152 ----------g~~~~~~~~~~~~~~~~~~~~l~~~~~--~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+-... +-.|. ..-..+..-++ . +..+-+...++| +.+.++++.+-+.+...+||+
T Consensus 188 ~~~~~~~~~~~~~d~-i~~D~-----~~HaSI~dG~~ls~~~~~a~~~~f~HN------D~~~Le~~L~~~~~~~~~Vv~ 255 (476)
T PLN02955 188 LLAASGKPLKNEKVA-IFSDA-----LNHASIIDGVRLAERQGNVEVFVYRHC------DMYHLNSLLSSCKMKRKVVVT 255 (476)
T ss_pred cccccccccCCCCcE-EEEec-----cchHHHHHHHHhccccCCceEEEeCCC------CHHHHHHHHHhCCCCceEEEE
Confidence 11111 11111 12223333221 1 112233344555 667788888766666789999
Q ss_pred cccccc
Q 014769 219 DEVYGH 224 (419)
Q Consensus 219 De~~~~ 224 (419)
|.+|+.
T Consensus 256 EgV~Sm 261 (476)
T PLN02955 256 DSLFSM 261 (476)
T ss_pred eCCCCC
Confidence 999885
No 408
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=62.47 E-value=99 Score=26.40 Aligned_cols=96 Identities=21% Similarity=0.190 Sum_probs=55.5
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
+....|++..||..|...+ ..|.+.|-.|.+.+|....-...+...| ++..+.- . +..+.+ ....+
T Consensus 7 l~gk~vlVvGgG~va~rk~-~~Ll~~ga~VtVvsp~~~~~l~~l~~~~-~i~~~~~----~--~~~~dl------~~~~l 72 (205)
T TIGR01470 7 LEGRAVLVVGGGDVALRKA-RLLLKAGAQLRVIAEELESELTLLAEQG-GITWLAR----C--FDADIL------EGAFL 72 (205)
T ss_pred cCCCeEEEECcCHHHHHHH-HHHHHCCCEEEEEcCCCCHHHHHHHHcC-CEEEEeC----C--CCHHHh------CCcEE
Confidence 3456888888888887775 4555677788888887653222222233 4444331 1 222322 12345
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeE-EEccc
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMV-VADEV 221 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l-i~De~ 221 (419)
++..++++. --.++...|++.++++ ++|+.
T Consensus 73 Vi~at~d~~-------ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 73 VIAATDDEE-------LNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred EEECCCCHH-------HHHHHHHHHHHcCCEEEECCCc
Confidence 555555531 1368999999999876 34543
No 409
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=62.33 E-value=76 Score=29.64 Aligned_cols=107 Identities=13% Similarity=0.164 Sum_probs=59.0
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEE--eeCCCCCC------cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVL--LPRPGWPY------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vl--v~~p~~~~------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (419)
.+.|+-.+||..+..++..+...-|..++ ..++.+.. ....++.+|++...+.+ +.+.+.....
T Consensus 60 yD~iV~lSGGkDSs~la~ll~~~~gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~~--------d~~~~~~l~~ 131 (343)
T TIGR03573 60 YDCIIGVSGGKDSTYQAHVLKKKLGLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTITI--------NPETFRKLQR 131 (343)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHhCCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEeC--------CHHHHHHHHH
Confidence 56778789998887776444333344443 44666642 34455667887766653 3343333222
Q ss_pred CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 179 KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 179 ~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
.... +..+|...+ .......+.++|+++|+.+|+..-...-.+
T Consensus 132 ~~~~-----~~~~pc~~c-~~~~~~~l~~~A~~~gi~~Il~G~~~dE~f 174 (343)
T TIGR03573 132 AYFK-----KVGDPEWPQ-DHAIFASVYQVALKFNIPLIIWGENIAEEY 174 (343)
T ss_pred HHHh-----ccCCCchhh-hhHHHHHHHHHHHHhCCCEEEeCCCHHHhc
Confidence 1100 222332222 123357788899999998888765544333
No 410
>cd06570 GH20_chitobiase-like_1 A functionally uncharacterized subgroup of the Glycosyl hydrolase family 20 (GH20) catalytic domain found in proteins similar to the chitobiase of Serratia marcescens, a beta-N-1,4-acetylhexosaminidase that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This subgroup lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=62.14 E-value=17 Score=33.44 Aligned_cols=61 Identities=20% Similarity=0.338 Sum_probs=41.1
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
+.+..+.+++..+.+..+.+|.+..+.+.+..... ..|-.++.+++++|++.|+++|+-||
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~lt~~g-----------~~~~~yT~~di~elv~yA~~rgI~vI 85 (311)
T cd06570 25 DAMASVKLNVFHWHLTDDQGFRIESKKYPKLQQKA-----------SDGLYYTQEQIREVVAYARDRGIRVV 85 (311)
T ss_pred HHHHHhCCeEEEEEEecCCCceeecCCCccccccC-----------CCCCccCHHHHHHHHHHHHHcCCEEE
Confidence 44556677888887766666666654433221110 13556999999999999999998666
No 411
>cd06562 GH20_HexA_HexB-like Beta-N-acetylhexosaminidases catalyze the removal of beta-1,4-linked N-acetyl-D-hexosamine residues from the non-reducing ends of N-acetyl-beta-D-hexosaminides including N-acetylglucosides and N-acetylgalactosides. The hexA and hexB genes encode the alpha- and beta-subunits of the two major beta-N-acetylhexosaminidase isoenzymes, N-acetyl-beta-D-hexosaminidase A (HexA) and beta-N-acetylhexosaminidase B (HexB). Both the alpha and the beta catalytic subunits have a TIM-barrel fold and belong to the glycosyl hydrolase family 20 (GH20). The HexA enzyme is a heterodimer containing one alpha and one beta subunit while the HexB enzyme is a homodimer containing two beta-subunits. Hexosaminidase mutations cause an inability to properly hydrolyze certain sphingolipids which accumulate in lysosomes within the brain, resulting in the lipid storage disorders Tay-Sachs and Sandhoff. Mutations in the alpha subunit cause in a deficiency in the HexA enzyme and result in
Probab=61.89 E-value=15 Score=34.45 Aligned_cols=64 Identities=19% Similarity=0.317 Sum_probs=44.1
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
..+..+.+++..+.+..+.+|.+..+.+.++.... ....+-.++.+++++|++.|+++||-||-
T Consensus 25 d~ma~~KlN~lh~HltDd~~~rle~~~~P~Lt~~g---------a~~~~~~YT~~di~eiv~yA~~rgI~vIP 88 (348)
T cd06562 25 DAMAYNKLNVLHWHITDSQSFPLESPSYPELSKKG---------AYSPSEVYTPEDVKEIVEYARLRGIRVIP 88 (348)
T ss_pred HHHHHhCCcEEEEeEEcCCCceEeeCCCchhhhcc---------CcCCCceECHHHHHHHHHHHHHcCCEEEE
Confidence 44556677888888776667777665544332211 11245678999999999999999987663
No 412
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=61.61 E-value=1.3e+02 Score=27.37 Aligned_cols=101 Identities=15% Similarity=0.103 Sum_probs=58.0
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
+..+-|++|.||...=..+..-+.+.|-++++.+-.-.+.. ..++..| ++..+.+|-.+. -++..+.+.+++
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g-~~~~y~cdis~~--eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIG-EAKAYTCDISDR--EEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcC-ceeEEEecCCCH--HHHHHHHHHHHHhc
Confidence 45567788888888777777778888887755543333332 2333335 566666543211 123333334433
Q ss_pred CccEEEEeCCC---CccccCCCHHHHHHHHHH
Q 014769 180 NTAAMVIINPG---NPCGNVFTYHHLQEIAEM 208 (419)
Q Consensus 180 ~~~~v~i~~p~---nptG~~~~~~~l~~i~~~ 208 (419)
++.-++++|.. .-.....+.+++++..++
T Consensus 113 G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~v 144 (300)
T KOG1201|consen 113 GDVDILVNNAGIVTGKKLLDCSDEEIQKTFDV 144 (300)
T ss_pred CCceEEEeccccccCCCccCCCHHHHHHHHHH
Confidence 45567777763 223345687888877754
No 413
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=60.76 E-value=1.2e+02 Score=26.97 Aligned_cols=91 Identities=13% Similarity=0.171 Sum_probs=56.9
Q ss_pred HHHHHHHHHHhcCCC-CeEEeeCCCCC---CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769 117 KQAVEVILSVLARPG-ANVLLPRPGWP---YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (419)
Q Consensus 117 ~~al~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 192 (419)
.-++...++-+.+-| |.+++++.-+. .+...++..|+...++-- |. .+.+.+++..+.....+++.+-+--
T Consensus 108 ~~Gie~F~~~~~~~GvdGlivpDLP~ee~~~~~~~~~~~gi~~I~lva-Pt----t~~~rl~~i~~~a~GFiY~vs~~Gv 182 (265)
T COG0159 108 NYGIEKFLRRAKEAGVDGLLVPDLPPEESDELLKAAEKHGIDPIFLVA-PT----TPDERLKKIAEAASGFIYYVSRMGV 182 (265)
T ss_pred HhhHHHHHHHHHHcCCCEEEeCCCChHHHHHHHHHHHHcCCcEEEEeC-CC----CCHHHHHHHHHhCCCcEEEEecccc
Confidence 444555555555555 88888875443 245667777877665532 21 2445666655545567777777778
Q ss_pred cccCCC-HHHHHHHHHHHHhC
Q 014769 193 CGNVFT-YHHLQEIAEMARKL 212 (419)
Q Consensus 193 tG~~~~-~~~l~~i~~~~~~~ 212 (419)
||.-.+ ...+.++++..+++
T Consensus 183 TG~~~~~~~~~~~~v~~vr~~ 203 (265)
T COG0159 183 TGARNPVSADVKELVKRVRKY 203 (265)
T ss_pred cCCCcccchhHHHHHHHHHHh
Confidence 888665 33477777777765
No 414
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=60.55 E-value=13 Score=37.49 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=30.7
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS 229 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~ 229 (419)
-.--++++++++++.|++.||-||+|-||.+|.-++
T Consensus 208 sryGtPedfk~fVD~aH~~GIgViLD~V~~HF~~d~ 243 (628)
T COG0296 208 SRYGTPEDFKALVDAAHQAGIGVILDWVPNHFPPDG 243 (628)
T ss_pred ccCCCHHHHHHHHHHHHHcCCEEEEEecCCcCCCCc
Confidence 334478999999999999999999999999876544
No 415
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=60.36 E-value=65 Score=27.87 Aligned_cols=91 Identities=18% Similarity=0.126 Sum_probs=49.9
Q ss_pred cHHHHHHHHHHHhcCCCCeE-EeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 115 GCKQAVEVILSVLARPGANV-LLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~v-lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
.|..+-. ++.+|..++-.| ++..+.-......++..|..++..+. -|.+.|.++++ +...|+++.+...
T Consensus 7 tG~~G~~-v~~~L~~~~~~V~~l~R~~~~~~~~~l~~~g~~vv~~d~-------~~~~~l~~al~-g~d~v~~~~~~~~- 76 (233)
T PF05368_consen 7 TGNQGRS-VVRALLSAGFSVRALVRDPSSDRAQQLQALGAEVVEADY-------DDPESLVAALK-GVDAVFSVTPPSH- 76 (233)
T ss_dssp TSHHHHH-HHHHHHHTTGCEEEEESSSHHHHHHHHHHTTTEEEES-T-------T-HHHHHHHHT-TCSEEEEESSCSC-
T ss_pred ccHHHHH-HHHHHHhCCCCcEEEEeccchhhhhhhhcccceEeeccc-------CCHHHHHHHHc-CCceEEeecCcch-
Confidence 3444433 344444455444 44454422233445667887664432 27888998888 5566666665432
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li 217 (419)
....+.-..+++.|.+.|+-.+
T Consensus 77 --~~~~~~~~~li~Aa~~agVk~~ 98 (233)
T PF05368_consen 77 --PSELEQQKNLIDAAKAAGVKHF 98 (233)
T ss_dssp --CCHHHHHHHHHHHHHHHT-SEE
T ss_pred --hhhhhhhhhHHHhhhccccceE
Confidence 2234556888898988876433
No 416
>PRK04296 thymidine kinase; Provisional
Probab=58.85 E-value=82 Score=26.43 Aligned_cols=93 Identities=12% Similarity=0.159 Sum_probs=51.0
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCC---CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeCCC
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWP---YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIINPG 190 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~ 190 (419)
+.++..+.+. ...|.+|++..|.+. .....+...|.....+.. ...+++.+.+. .+..+|++-..+
T Consensus 17 T~~l~~~~~~-~~~g~~v~i~k~~~d~~~~~~~i~~~lg~~~~~~~~-------~~~~~~~~~~~~~~~~~dvviIDEaq 88 (190)
T PRK04296 17 TELLQRAYNY-EERGMKVLVFKPAIDDRYGEGKVVSRIGLSREAIPV-------SSDTDIFELIEEEGEKIDCVLIDEAQ 88 (190)
T ss_pred HHHHHHHHHH-HHcCCeEEEEeccccccccCCcEecCCCCcccceEe-------CChHHHHHHHHhhCCCCCEEEEEccc
Confidence 3445444444 446888888876432 233344445543322211 12233333322 245667776653
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
.++.+++.++.+.++..++.+|+=.-.
T Consensus 89 -----~l~~~~v~~l~~~l~~~g~~vi~tgl~ 115 (190)
T PRK04296 89 -----FLDKEQVVQLAEVLDDLGIPVICYGLD 115 (190)
T ss_pred -----cCCHHHHHHHHHHHHHcCCeEEEEecC
Confidence 367777888888888888877764433
No 417
>PF01902 ATP_bind_4: ATP-binding region; InterPro: IPR002761 This domain is about 200 amino acids long with a strongly conserved motif SGGKD at the N-terminal. The structure of Q8U2K6 from SWISSPROT from Pyrococcus furiosus has been resolved to 2.7A and is suggested to be a putative N-type pytophosphatase. In some members of the family e.g. Q12429 from SWISSPROT, this domain is associated with IPR006175 from INTERPRO, another domain of unknown function. Proteins with this uncharacterised domain include two apparent ortholog families in the archaea, one of which is universal among the first four completed archaeal genomes. The domain comprises the full length of the archaeal proteins and the first third of fungal proteins.; PDB: 3RK0_A 3RK1_A 3RJZ_A 2D13_D.
Probab=57.16 E-value=87 Score=27.08 Aligned_cols=98 Identities=14% Similarity=0.176 Sum_probs=55.0
Q ss_pred EEEcccHHHHHHHHHHHhcCCCCeEE----eeC-CC---CC-----CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769 110 VYVTLGCKQAVEVILSVLARPGANVL----LPR-PG---WP-----YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~vl----v~~-p~---~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
++..+||..+..++.+++.+ .+.+. ++. .. |+ .....++..|++...++..... .-..+++..+
T Consensus 4 v~l~SGGKDS~lAl~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~g~~--~~~~~~l~~~ 80 (218)
T PF01902_consen 4 VALWSGGKDSCLALYRALRQ-HEVVCLLTMVPEEEDSYMFHGVNIELIEAQAEALGIPLIEIPTSGDE--EDYVEDLKEA 80 (218)
T ss_dssp EEE--SSHHHHHHHHHHHHT--EEEEEEEEEESTTT-SSS-STTGTCHHHHHHHHT--EEEEEE---C--CCHHHHHHHH
T ss_pred EEEEcCcHHHHHHHHHHHHh-CCccEEEEeccCCCCcccccccCHHHHHHHHHHCCCCEEEEEccCcc--chhhHHHHHH
Confidence 56789999999998888876 44322 111 11 11 1245678889998887764221 1235667777
Q ss_pred hcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 177 ADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 177 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
++. +...++ +|.+.+......+-++|.+.|+-.+
T Consensus 81 l~~~~v~~vv-------~GdI~~~~~r~~~e~vc~~lGl~~~ 115 (218)
T PF01902_consen 81 LKELKVEAVV-------FGDIDSEYQRNWVERVCERLGLEAV 115 (218)
T ss_dssp HCTC--SEEE---------TTS-HHHHHHHHHHHHHCT-EEE
T ss_pred HHHcCCCEEE-------ECcCCcHHHHHHHHHHHHHcCCEEE
Confidence 654 222333 7889988888889999999987665
No 418
>PLN02591 tryptophan synthase
Probab=56.84 E-value=1.4e+02 Score=26.42 Aligned_cols=156 Identities=14% Similarity=0.216 Sum_probs=91.0
Q ss_pred CCCCeeeccCC--CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc-cH
Q 014769 40 DPRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL-GC 116 (419)
Q Consensus 40 ~~~~~i~l~~g--~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~-g~ 116 (419)
.|-++|-+++- ||..+ -|.++++..+++.++.. ...+-+.+.+.- +...++ =|+++- +-
T Consensus 28 ~Gad~iElGiPfSDP~aD-----GpvIq~a~~rAL~~G~~--------~~~~~~~~~~~r-~~~~~p----~ilm~Y~N~ 89 (250)
T PLN02591 28 CGADVIELGVPYSDPLAD-----GPVIQAAATRALEKGTT--------LDSVISMLKEVA-PQLSCP----IVLFTYYNP 89 (250)
T ss_pred CCCCEEEECCCCCCCccc-----CHHHHHHHHHHHHcCCC--------HHHHHHHHHHHh-cCCCCC----EEEEecccH
Confidence 38899988775 44332 37888888888876421 123333333322 111111 133321 11
Q ss_pred --HHHHHHHHHHhcCCC-CeEEeeCCCCC---CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCC
Q 014769 117 --KQAVEVILSVLARPG-ANVLLPRPGWP---YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (419)
Q Consensus 117 --~~al~~~~~~l~~~g-d~vlv~~p~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 190 (419)
..++...+..+.+-| |.|++++..+. .+...++..|+....+-- | ..+.+.++.........++++.-.
T Consensus 90 i~~~G~~~F~~~~~~aGv~GviipDLP~ee~~~~~~~~~~~gl~~I~lv~-P----tt~~~ri~~ia~~~~gFIY~Vs~~ 164 (250)
T PLN02591 90 ILKRGIDKFMATIKEAGVHGLVVPDLPLEETEALRAEAAKNGIELVLLTT-P----TTPTERMKAIAEASEGFVYLVSST 164 (250)
T ss_pred HHHhHHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-C----CCCHHHHHHHHHhCCCcEEEeeCC
Confidence 336666677776666 99999987764 345666777887665431 2 124455666555556677777667
Q ss_pred CccccCCC-HHHHHHHHHHHHhC-CCeEEE
Q 014769 191 NPCGNVFT-YHHLQEIAEMARKL-RVMVVA 218 (419)
Q Consensus 191 nptG~~~~-~~~l~~i~~~~~~~-~~~li~ 218 (419)
.-||.... .++++++++.++++ ++.+++
T Consensus 165 GvTG~~~~~~~~~~~~i~~vk~~~~~Pv~v 194 (250)
T PLN02591 165 GVTGARASVSGRVESLLQELKEVTDKPVAV 194 (250)
T ss_pred CCcCCCcCCchhHHHHHHHHHhcCCCceEE
Confidence 77886422 46678877777764 555554
No 419
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=55.03 E-value=1e+02 Score=28.55 Aligned_cols=73 Identities=15% Similarity=0.205 Sum_probs=48.4
Q ss_pred CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
.|.+|...++.-.+++++++...... .+.+-.++. +.|.|++--|- .++.++.++|++.|+++| +.+.|
T Consensus 60 ~y~syEeLakd~~vDvVyi~~~~~qH----~evv~l~l~-~~K~VL~EKPl-----a~n~~e~~~iveaA~~rg-v~~me 128 (351)
T KOG2741|consen 60 AYGSYEELAKDPEVDVVYISTPNPQH----YEVVMLALN-KGKHVLCEKPL-----AMNVAEAEEIVEAAEARG-VFFME 128 (351)
T ss_pred cccCHHHHhcCCCcCEEEeCCCCccH----HHHHHHHHH-cCCcEEecccc-----cCCHHHHHHHHHHHHHcC-cEEEe
Confidence 57788888888888998887643222 233333333 34556665553 367789999999999998 55556
Q ss_pred cccc
Q 014769 220 EVYG 223 (419)
Q Consensus 220 e~~~ 223 (419)
..|.
T Consensus 129 g~~~ 132 (351)
T KOG2741|consen 129 GLWW 132 (351)
T ss_pred eeee
Confidence 6554
No 420
>KOG1467 consensus Translation initiation factor 2B, delta subunit (eIF-2Bdelta/GCD2) [Translation, ribosomal structure and biogenesis]
Probab=51.70 E-value=1.3e+02 Score=29.22 Aligned_cols=131 Identities=17% Similarity=0.169 Sum_probs=77.0
Q ss_pred CCCCHHHHHHHHHHHHhhCC-----------CCCCCCcEEEcccHHHHHHHHHHHhcCCC--CeEE-ee-CCCCCC--cH
Q 014769 83 NSGIPPARRAIADYLSRDLP-----------YKLSADDVYVTLGCKQAVEVILSVLARPG--ANVL-LP-RPGWPY--YE 145 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~-----------~~~~~~~i~~t~g~~~al~~~~~~l~~~g--d~vl-v~-~p~~~~--~~ 145 (419)
.++-.+|...|-+|+..... ..+...++++|-|.+..++.++....+.| =+|+ |. .|.+-+ ..
T Consensus 324 ~eaKe~L~~~I~~~i~eki~~A~qaI~q~a~~KI~dgdviltyg~s~vV~~ill~A~~~~k~frVvVVDSRP~~EG~~~l 403 (556)
T KOG1467|consen 324 SEAKEELQSDIDRFIAEKIILADQAISQHAVTKIQDGDVLLTYGSSSVVNMILLEAKELGKKFRVVVVDSRPNLEGRKLL 403 (556)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCEEEEecchHHHHHHHHHHHHhCcceEEEEEeCCCCcchHHHH
Confidence 44556777777777765432 13566789999888888888777654433 3444 44 355544 34
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE-ccccc
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA-DEVYG 223 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~-De~~~ 223 (419)
..+...|+++.++.+.. +..+- .+-+++++=.+.----|.+++.---..++=+++.+|+.+|+ =|+|-
T Consensus 404 r~Lv~~GinctYv~I~a-------~syim---~evtkvfLGahailsNG~vysR~GTa~valvAna~nVPVlVCCE~yK 472 (556)
T KOG1467|consen 404 RRLVDRGINCTYVLINA-------ASYIM---LEVTKVFLGAHAILSNGAVYSRVGTACVALVANAFNVPVLVCCEAYK 472 (556)
T ss_pred HHHHHcCCCeEEEEehh-------HHHHH---HhcceeeechhhhhcCcchhhhcchHHHHHHhcccCCCEEEEechhh
Confidence 55666799988876531 11111 11233333233322347888766666777778889997665 34444
No 421
>TIGR03815 CpaE_hom_Actino helicase/secretion neighborhood CpaE-like protein. Members of this protein family belong to the MinD/ParA family of P-loop NTPases, and in particular show homology to the CpaE family of pilus assembly proteins (see PubMed:12370432). Nearly all members are found, not only in a gene context consistent with pilus biogenesis or a pilus-like secretion apparatus, but also near a DEAD/DEAH-box helicase, suggesting an involvement in DNA transfer activity. The model describes a clade restricted to the Actinobacteria.
Probab=50.41 E-value=2.1e+02 Score=26.37 Aligned_cols=55 Identities=15% Similarity=0.111 Sum_probs=34.6
Q ss_pred ccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 167 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
.++.+.+...+......-++..+..+ +..++.+.++++.+..+++--++|+|-.-
T Consensus 160 ~~~~~~l~~~~~~~~~l~vl~~~~~~-~~~~~~~~l~~~l~~l~~~~D~VIID~p~ 214 (322)
T TIGR03815 160 RLPAGALRDALPRRGGLSVLSWGRAV-GAALPPAAVRAVLDAARRGGDLVVVDLPR 214 (322)
T ss_pred CcCHHHHHHhCCCcCCeEEEecCCCC-cCCCCHHHHHHHHHHHHhcCCEEEEeCCC
Confidence 34556666665543334455555443 34467788888888877765688888653
No 422
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=49.60 E-value=2.4e+02 Score=26.90 Aligned_cols=131 Identities=15% Similarity=0.121 Sum_probs=76.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc-HHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCC--
Q 014769 77 FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG-CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQV-- 153 (419)
Q Consensus 77 ~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g-~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~-- 153 (419)
.+.|....-.+++.++..+-+.+ +|.+....+.+..+. --..++.-+..+.+. ...++...+|..-...+..+--
T Consensus 46 SNdYLGLa~~~~~~~a~~~~~~~-~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~-e~al~f~SGy~AN~~~i~~l~~~~ 123 (388)
T COG0156 46 SNDYLGLASHPELIEAAKAAIRR-YGVGAGGSRLISGTSDLHVELEEELADFLGA-EAALLFSSGFVANLGLLSALLKKG 123 (388)
T ss_pred ccCcccccCCHHHHHHHHHHHHH-hCCCCCCcCcccCCcHHHHHHHHHHHHHhCC-CcEEEEcccchhHHHHHHHhcCCC
Confidence 45787777778999999988876 566666555444333 334466666666544 4667777788754444433322
Q ss_pred EEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC---CCeEEEcccccc
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL---RVMVVADEVYGH 224 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~---~~~li~De~~~~ 224 (419)
.+... |. .+-..+.+-++ .+...+.+- || +.+.|+++.+-+++. ..+|++|.+|+.
T Consensus 124 dli~~--D~-----lnHASiidG~rls~a~~~~f~--Hn------D~~~Le~~l~~~~~~~~~~~~IvtegVfSM 183 (388)
T COG0156 124 DLIFS--DE-----LNHASIIDGIRLSRAEVRRFK--HN------DLDHLEALLEEARENGARRKLIVTEGVFSM 183 (388)
T ss_pred cEEEE--ec-----hhhhhHHHHHHhCCCcEEEec--CC------CHHHHHHHHHhhhccCCCceEEEEeccccC
Confidence 22222 11 22233333332 233444433 33 556777777766544 489999999996
No 423
>TIGR00290 MJ0570_dom MJ0570-related uncharacterized domain. Proteins with this uncharacterized domain include two apparent ortholog families in the Archaea, one of which is universal among the first four completed archaeal genomes, and YLR143W, a much longer protein from Saccharomyces cerevisiae. The domain comprises the full length of the archaeal proteins and the first third of the yeast protein.
Probab=48.90 E-value=1.8e+02 Score=25.26 Aligned_cols=98 Identities=13% Similarity=0.197 Sum_probs=62.5
Q ss_pred EEEcccHHHHHHHHHHHhcCCCCeEEe----eCC--CC--C-----CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769 110 VYVTLGCKQAVEVILSVLARPGANVLL----PRP--GW--P-----YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~vlv----~~p--~~--~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
++..+||..+..++..+..+ .+.+.+ +.. .| + -....++..|++...++.... ..-..+++.++
T Consensus 4 ~~l~SGGKDS~~al~~a~~~-~~v~~L~t~~~~~~~s~~~H~~~~~~~~~qA~algipl~~~~~~~~--~e~~~e~l~~~ 80 (223)
T TIGR00290 4 AALISGGKDSCLALYHALKE-HEVISLVNIMPENEESYMFHGVNAHLTDLQAESIGIPLIKLYTEGT--EEDEVEELKGI 80 (223)
T ss_pred EEEecCcHHHHHHHHHHHHh-CeeEEEEEEecCCCCcccccccCHHHHHHHHHHcCCCeEEeecCCC--ccHHHHHHHHH
Confidence 56779999999999988876 554432 111 11 1 123556777888766553221 12235566666
Q ss_pred hcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 177 ADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 177 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
++. +...++ +|.+.+......+-++|.+.|+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~v~~~lgl~~~ 115 (223)
T TIGR00290 81 LHTLDVEAVV-------FGAIYSEYQKTRIERVCRELGLKSF 115 (223)
T ss_pred HHHcCCCEEE-------ECCcccHHHHHHHHHHHHhcCCEEe
Confidence 554 333333 7999999999999999999887655
No 424
>cd06569 GH20_Sm-chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=48.49 E-value=37 Score=33.04 Aligned_cols=73 Identities=14% Similarity=0.336 Sum_probs=45.8
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCc---------cEEE--E-eCC--CCccccCCCHHHHHHHHHHHH
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT---------AAMV--I-INP--GNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~---------~~v~--i-~~p--~nptG~~~~~~~l~~i~~~~~ 210 (419)
.+.+..+.+++..+.+..+.+|.+.++.+.++..... ..+. . ..| ..+.+-.++.+++++|++.|+
T Consensus 28 Id~ma~~K~N~lHlHLtDdqgwriei~~~P~Lt~~ga~r~~~~~~~~~~~~~~~~~~~~~~~~~g~YT~~di~eiv~yA~ 107 (445)
T cd06569 28 LDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTEVGAKRCHDLSETTCLLPQLGSGPDTNNSGSGYYSRADYIEILKYAK 107 (445)
T ss_pred HHHHHHhCCceEEEEeecCCCcceeccCCchhhhcccccccccccccccccccccCcccCcccCCccCHHHHHHHHHHHH
Confidence 3445666788888888777778777665543321110 0000 0 011 123355799999999999999
Q ss_pred hCCCeEE
Q 014769 211 KLRVMVV 217 (419)
Q Consensus 211 ~~~~~li 217 (419)
+++|-||
T Consensus 108 ~rgI~VI 114 (445)
T cd06569 108 ARHIEVI 114 (445)
T ss_pred HcCCEEE
Confidence 9998766
No 425
>TIGR00289 conserved hypothetical protein TIGR00289. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs found by this model above the trusted cutoff, the much longer protein YLR143W from Saccharomyces cerevisiae, and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group.
Probab=48.03 E-value=1.5e+02 Score=25.72 Aligned_cols=98 Identities=12% Similarity=0.161 Sum_probs=61.1
Q ss_pred EEEcccHHHHHHHHHHHhcCCCCeEEee--CCC------CC-----CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769 110 VYVTLGCKQAVEVILSVLARPGANVLLP--RPG------WP-----YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~vlv~--~p~------~~-----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
++..+||..+..++..++.+ .+.+.+. .|. ++ .....++..|++...+..... +.-..+++.+.
T Consensus 4 ~vl~SGGKDS~lAl~~~~~~-~~V~~L~~~~~~~~~s~~~h~~~~~~~~~qA~algiPl~~~~~~~~--~e~~~~~l~~~ 80 (222)
T TIGR00289 4 AVLYSGGKDSILALYKALEE-HEVISLVGVFSENEESYMFHSPNLHLTDLVAEAVGIPLIKLYTSGE--EEKEVEDLAGQ 80 (222)
T ss_pred EEEecCcHHHHHHHHHHHHc-CeeEEEEEEcCCCCCccccccCCHHHHHHHHHHcCCCeEEEEcCCc--hhHHHHHHHHH
Confidence 45678998888888887765 5543322 221 11 124566778888766654321 12234455554
Q ss_pred hcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 177 ADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 177 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
+.. +...++ +|.+.+......+-++|.+.|+..+
T Consensus 81 l~~~gv~~vv-------~GdI~s~~qr~~~e~vc~~~gl~~~ 115 (222)
T TIGR00289 81 LGELDVEALC-------IGAIESNYQKSRIDKVCRELGLKSI 115 (222)
T ss_pred HHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEe
Confidence 443 333333 7999999999999999999887655
No 426
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=47.96 E-value=36 Score=26.51 Aligned_cols=38 Identities=21% Similarity=0.370 Sum_probs=24.1
Q ss_pred HHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 172 ~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.+++.+..++++++++.-..| + +.+.++|+++++.++.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~~~-----p----~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGLEP-----P----PELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT------------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCCCCCEEEEECcCCC-----C----HHHHHHHHHhCCcEEE
Confidence 455666778899999865543 2 7888999999997764
No 427
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=46.13 E-value=2.3e+02 Score=25.75 Aligned_cols=44 Identities=16% Similarity=0.230 Sum_probs=31.3
Q ss_pred ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
-++.++++...+.+.+++.+-.. +.++-++|.++++++|+.++=
T Consensus 78 v~~~l~e~~~~gvk~avI~s~Gf------~~~~~~~l~~~a~~~girvlG 121 (291)
T PRK05678 78 AADAILEAIDAGIDLIVCITEGI------PVLDMLEVKAYLERKKTRLIG 121 (291)
T ss_pred HHHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEEC
Confidence 35677777777777777665443 244446899999999998883
No 428
>PRK08265 short chain dehydrogenase; Provisional
Probab=45.93 E-value=2.1e+02 Score=25.16 Aligned_cols=55 Identities=16% Similarity=0.047 Sum_probs=32.1
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
...+++|.++...=..+...|.+.|..|++..-.-..........+.++..+.+|
T Consensus 6 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (261)
T PRK08265 6 GKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATD 60 (261)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEec
Confidence 3467777766665566667777788888776433222233334445555565554
No 429
>cd06563 GH20_chitobiase-like The chitobiase of Serratia marcescens is a beta-N-1,4-acetylhexosaminidase with a glycosyl hydrolase family 20 (GH20) domain that hydrolyzes the beta-1,4-glycosidic linkages in oligomers derived from chitin. Chitin is degraded by a two step process: i) a chitinase hydrolyzes the chitin to oligosaccharides and disaccharides such as di-N-acetyl-D-glucosamine and chitobiose, ii) chitobiase then further degrades these oligomers into monomers. This GH20 domain family includes an N-acetylglucosamidase (GlcNAcase A) from Pseudoalteromonas piscicida and an N-acetylhexosaminidase (SpHex) from Streptomyces plicatus. SpHex lacks the C-terminal PKD (polycystic kidney disease I)-like domain found in the chitobiases. The GH20 hexosaminidases are thought to act via a catalytic mechanism in which the catalytic nucleophile is not provided by solvent or the enzyme, but by the substrate itself.
Probab=45.86 E-value=39 Score=31.77 Aligned_cols=73 Identities=21% Similarity=0.444 Sum_probs=44.1
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC--ccEEEEeCC-----CCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN--TAAMVIINP-----GNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~~p-----~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+.+..++++...+.+..+.+|.+.++...++-... ...-....| ..+.|-.++.+++++|++.|+++|+-||-
T Consensus 25 d~ma~~K~N~lhlHltDdq~~rle~~~~P~Lt~~ga~~~~~~~~~~~~~~~~~~~~~~YT~~di~eiv~yA~~rgI~VIP 104 (357)
T cd06563 25 DLMALYKLNVFHWHLTDDQGWRIEIKKYPKLTEVGAWRGPTEIGLPQGGGDGTPYGGFYTQEEIREIVAYAAERGITVIP 104 (357)
T ss_pred HHHHHhccceEEEeeecCCCceecccCcchhhhcccccCcccccccccccCCCccCceECHHHHHHHHHHHHHcCCEEEE
Confidence 44455677777777766667776655443321110 000000011 23446689999999999999999987663
No 430
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=44.86 E-value=2.1e+02 Score=25.00 Aligned_cols=72 Identities=17% Similarity=0.254 Sum_probs=44.8
Q ss_pred cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
|.+++..-+++-..++ ..-+|-+...+|..+..+. ..+..- ...+-+.-+.+++.+|++-+++-..-
T Consensus 93 y~DILD~K~L~eIVVn--~RIdWL~HfSALLSAvGE~NVpLA~~----------VNI~GvHNil~vAa~~kL~iFVPSTI 160 (366)
T KOG2774|consen 93 YLDILDQKSLEEIVVN--KRIDWLVHFSALLSAVGETNVPLALQ----------VNIRGVHNILQVAAKHKLKVFVPSTI 160 (366)
T ss_pred hhhhhccccHHHhhcc--cccceeeeHHHHHHHhcccCCceeee----------ecchhhhHHHHHHHHcCeeEeecccc
Confidence 4556655555543332 3346777788888777653 222222 22333677889999999999998777
Q ss_pred ccccc
Q 014769 223 GHLTF 227 (419)
Q Consensus 223 ~~~~~ 227 (419)
+.|.-
T Consensus 161 GAFGP 165 (366)
T KOG2774|consen 161 GAFGP 165 (366)
T ss_pred cccCC
Confidence 66543
No 431
>smart00642 Aamy Alpha-amylase domain.
Probab=44.40 E-value=31 Score=28.37 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=25.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHL 225 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~ 225 (419)
+.++++++++.|+++|+-||.|-+..+.
T Consensus 68 t~~d~~~lv~~~h~~Gi~vilD~V~NH~ 95 (166)
T smart00642 68 TMEDFKELVDAAHARGIKVILDVVINHT 95 (166)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 4688999999999999999999988763
No 432
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=43.74 E-value=1.9e+02 Score=25.63 Aligned_cols=99 Identities=15% Similarity=0.231 Sum_probs=54.8
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcC-------------------CCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLAR-------------------PGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPER 164 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~-------------------~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~ 164 (419)
...+|++|.|+.+.-...- ... +.+.++...|-|..- ...++.+++++.... +.
T Consensus 129 ~~~~iflttGsk~L~~f~~--~~~~~~r~~~RvLp~~~~~~g~~~~~iia~~GPfs~e~n~al~~~~~i~~lVtK---~S 203 (249)
T PF02571_consen 129 GGGRIFLTTGSKNLPPFVP--APLPGERLFARVLPTPESALGFPPKNIIAMQGPFSKELNRALFRQYGIDVLVTK---ES 203 (249)
T ss_pred CCCCEEEeCchhhHHHHhh--cccCCCEEEEEECCCccccCCCChhhEEEEeCCCCHHHHHHHHHHcCCCEEEEc---CC
Confidence 4479999999887655533 111 223444444444322 345566677655432 22
Q ss_pred CcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769 165 NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 210 (419)
+..-..+.++.+..-+.++++|--|.-|.|... .+.++++.++++
T Consensus 204 G~~g~~eKi~AA~~lgi~vivI~RP~~~~~~~~-~~~~~e~l~~l~ 248 (249)
T PF02571_consen 204 GGSGFDEKIEAARELGIPVIVIKRPPEPYGDPV-VETIEELLDWLE 248 (249)
T ss_pred CchhhHHHHHHHHHcCCeEEEEeCCCCCCCCcc-cCCHHHHHHHHh
Confidence 222344666666666778888888876654432 112566665543
No 433
>COG0505 CarA Carbamoylphosphate synthase small subunit [Amino acid transport and metabolism / Nucleotide transport and metabolism]
Probab=42.34 E-value=84 Score=29.20 Aligned_cols=57 Identities=21% Similarity=0.320 Sum_probs=40.0
Q ss_pred CCCeEEeeCCCCC-CcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC-CCCcccc
Q 014769 130 PGANVLLPRPGWP-YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN-PGNPCGN 195 (419)
Q Consensus 130 ~gd~vlv~~p~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~-p~nptG~ 195 (419)
++.+|++.+.+.- +....+...|+++..+|. ..+.+++.+. ++..|+++| |.+|.-.
T Consensus 178 ~~~~Vv~iD~GvK~nIlr~L~~rg~~vtVVP~------~t~~eeIl~~---~pDGiflSNGPGDP~~~ 236 (368)
T COG0505 178 PGKHVVVIDFGVKRNILRELVKRGCRVTVVPA------DTSAEEILAL---NPDGIFLSNGPGDPAPL 236 (368)
T ss_pred CCcEEEEEEcCccHHHHHHHHHCCCeEEEEcC------CCCHHHHHhh---CCCEEEEeCCCCChhHH
Confidence 4567777777665 566777788999998875 2466666543 678898886 6788433
No 434
>PRK11070 ssDNA exonuclease RecJ; Provisional
Probab=42.30 E-value=3.8e+02 Score=27.16 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=50.8
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEee-CCCCCCc------HHHHhhcCC-EE-EEEeccCCCCcccChHHHHHhhcCCccEE
Q 014769 114 LGCKQAVEVILSVLARPGANVLLP-RPGWPYY------EGIAQRKQV-EV-RHFDLLPERNWEVDLDAVEALADKNTAAM 184 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~-~p~~~~~------~~~~~~~g~-~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~~v 184 (419)
.+-..+...+..++.+. .+|++. +..-.+. ...++..|. .+ .++|-.-.++|+++.+.+++....+..++
T Consensus 53 ~~m~~a~~ri~~ai~~~-e~I~I~gDyD~DGitstail~~~L~~~g~~~~~~~IP~R~~eGYGl~~~~i~~~~~~~~~Li 131 (575)
T PRK11070 53 SGIEKAVELLYNALREG-TRIIVVGDFDADGATSTALSVLALRSLGCSNVDYLVPNRFEDGYGLSPEVVDQAHARGAQLI 131 (575)
T ss_pred hCHHHHHHHHHHHHHCC-CEEEEEEecCccHHHHHHHHHHHHHHcCCCceEEEeCCCCcCCCCCCHHHHHHHHhcCCCEE
Confidence 55556666665555432 333332 3222222 233455565 23 34443335778999998888776566666
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+.+.. |.. + .+.++.|++.|+-+|+
T Consensus 132 ItvD~----Gi~-~----~e~i~~a~~~gidvIV 156 (575)
T PRK11070 132 VTVDN----GIS-S----HAGVAHAHALGIPVLV 156 (575)
T ss_pred EEEcC----CcC-C----HHHHHHHHHCCCCEEE
Confidence 55543 221 2 3445567788884444
No 435
>PF03748 FliL: Flagellar basal body-associated protein FliL; InterPro: IPR005503 This FliL protein controls the rotational direction of the flagella during chemotaxis []. FliL is a cytoplasmic membrane protein associated with the basal body [].; GO: 0001539 ciliary or flagellar motility, 0006935 chemotaxis, 0009425 bacterial-type flagellum basal body
Probab=41.91 E-value=33 Score=25.10 Aligned_cols=51 Identities=22% Similarity=0.234 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
|.+++++...++......-..+.|...|++.+.+.+++..+. -.-++|+||
T Consensus 44 ~~ird~ii~~l~~~~~~~l~~~~g~~~Lk~~l~~~in~~l~~-~~V~~V~ft 94 (99)
T PF03748_consen 44 PRIRDAIISYLSSKTAEDLSGPEGKERLKDELKDRINKILGK-GKVKDVYFT 94 (99)
T ss_pred HHHHHHHHHHHHcCCHHHhcChhhHHHHHHHHHHHHHHhhcc-CcEEEEEEE
Confidence 567777777777655444555688999999999999876542 235666665
No 436
>PRK14454 ribosomal RNA large subunit methyltransferase N; Provisional
Probab=41.76 E-value=3e+02 Score=25.75 Aligned_cols=68 Identities=12% Similarity=0.130 Sum_probs=39.0
Q ss_pred hcCCEE-EEEeccCCCC-cccChHHHHHhhcCCccEEEEeCCCCcccc----CCCHHHHHHHHHHHHhCCCeEEE
Q 014769 150 RKQVEV-RHFDLLPERN-WEVDLDAVEALADKNTAAMVIINPGNPCGN----VFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 150 ~~g~~~-~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~i~~p~nptG~----~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
..+.++ ..+++.++-+ ..-+.+.+.+.++.... .+=.-|-||+|. ..+.++++++.++.+++|+-+.+
T Consensus 247 ~~~~rv~iey~LI~gvNDs~eda~~La~llk~l~~-~VnLiPyn~~~~~~~~~ps~e~l~~f~~~l~~~gi~v~i 320 (342)
T PRK14454 247 KTNRRITFEYALVKGVNDSKEDAKELGKLLKGMLC-HVNLIPVNEVKENGFKKSSKEKIKKFKNILKKNGIETTI 320 (342)
T ss_pred HhCCEEEEEEEeECCCCCCHHHHHHHHHHHhcCCc-eEEEEecCCCCCCCCCCCCHHHHHHHHHHHHHCCCcEEE
Confidence 345443 3455544322 22345556666654322 222246666654 36788999999999999887665
No 437
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain. Although technically reversible, it is believed that this group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which it has been characterized. In most species this protein exists as a fused alpha-beta domain polypeptide. In Pyrococcus and related species, however the domains exist as separate polypeptides. This model represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. In reference, one of these (along with its beta-domain partner) was characterized as ACS-II showing specificity for phenylacetyl-CoA. This model has been constructed to exclude these non-ACS-I paralogs. This may result in new, authentic ACS-I sequences falling below the trusted cutoff.
Probab=41.16 E-value=2.6e+02 Score=27.29 Aligned_cols=56 Identities=25% Similarity=0.354 Sum_probs=35.8
Q ss_pred hHHHHHhhcCCccEEEEeCCCC-ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 170 LDAVEALADKNTAAMVIINPGN-PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
.+.++++...+.+.+++..-.. .+|.- ..+.-+++.++|+++|+.++--.+.+.+.
T Consensus 78 ~~~l~e~~~~gv~~~vi~s~gf~e~g~~-g~~~~~~l~~~a~~~girvlGPnc~G~~~ 134 (447)
T TIGR02717 78 PQVVEECGEKGVKGAVVITAGFKEVGEE-GAELEQELVEIARKYGMRLLGPNCLGIIN 134 (447)
T ss_pred HHHHHHHHhcCCCEEEEECCCccccCcc-hHHHHHHHHHHHHHcCCEEEecCeeeEec
Confidence 5566677666777776654432 23321 11223789999999999999877766544
No 438
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=38.92 E-value=1.3e+02 Score=27.22 Aligned_cols=43 Identities=16% Similarity=0.240 Sum_probs=30.8
Q ss_pred hHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 170 LDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
++.++++...+.+.+++.+... +..+-++|.++++++|+.++=
T Consensus 77 ~~~l~e~~~~Gvk~avIis~Gf------~e~~~~~l~~~a~~~girilG 119 (286)
T TIGR01019 77 ADAIFEAIDAGIELIVCITEGI------PVHDMLKVKRYMEESGTRLIG 119 (286)
T ss_pred HHHHHHHHHCCCCEEEEECCCC------CHHHHHHHHHHHHHcCCEEEC
Confidence 5667777777777777765443 333457899999999998883
No 439
>PLN03244 alpha-amylase; Provisional
Probab=38.83 E-value=50 Score=34.38 Aligned_cols=37 Identities=16% Similarity=0.118 Sum_probs=30.8
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 228 (419)
|+...-+.++++++++.|++.|+-||.|-||.++.-+
T Consensus 433 pssRYGTPeDLK~LVD~aH~~GI~VILDvV~NH~~~d 469 (872)
T PLN03244 433 ASSRYGTPDDFKRLVDEAHGLGLLVFLDIVHSYAAAD 469 (872)
T ss_pred cCcccCCHHHHHHHHHHHHHCCCEEEEEecCccCCCc
Confidence 4444556899999999999999999999999876543
No 440
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=38.02 E-value=1.5e+02 Score=25.53 Aligned_cols=52 Identities=13% Similarity=0.144 Sum_probs=35.8
Q ss_pred hHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc
Q 014769 170 LDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 223 (419)
++.++++++....++-+-.-+..+-.. .+..+++.++|+++++.+|+++-..
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~--~~~a~~~~~lc~~~~v~liINd~~d 75 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEY--LALAEKLRALCQKYGVPLIINDRVD 75 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHH--HHHHHHHHHHHHHhCCeEEecCcHH
Confidence 677888887665555544444333222 4566899999999999988887554
No 441
>PF02662 FlpD: Methyl-viologen-reducing hydrogenase, delta subunit; InterPro: IPR003813 Methyl-viologen-reducing hydrogenase (MVH) is one of the enzymes involved in methanogenesis and coded in the mth-flp-mvh-mrt cluster of methane genes in Methanothermobacter thermautotrophicus (Methanobacterium thermoformicicum) []. No specific functions have been assigned to the delta subunit.; GO: 0015948 methanogenesis, 0055114 oxidation-reduction process
Probab=37.07 E-value=1.7e+02 Score=22.65 Aligned_cols=49 Identities=14% Similarity=0.245 Sum_probs=36.6
Q ss_pred cccChHHHHHhhcCCccEEEEe--CC---CCccccCCCHHHHHHHHHHHHhCCC
Q 014769 166 WEVDLDAVEALADKNTAAMVII--NP---GNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~--~p---~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
..+|++.+..++......|++. .| +...|...-...++.+-++..+.|+
T Consensus 38 Grv~~~~il~Af~~GADGV~V~gC~~g~Ch~~~Gn~~a~~Rv~~~k~~L~~~Gi 91 (124)
T PF02662_consen 38 GRVDPEFILRAFEKGADGVLVAGCHPGDCHYREGNYRAEKRVERLKKLLEELGI 91 (124)
T ss_pred CccCHHHHHHHHHcCCCEEEEeCCCCCCCCcchhhHHHHHHHHHHHHHHHHcCC
Confidence 3789999999998887777763 33 4578888777777777777776653
No 442
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=36.96 E-value=3.3e+02 Score=24.86 Aligned_cols=54 Identities=11% Similarity=0.127 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVT---LGCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+-.+ -|+.. +++.+++..+-.+-.-.-|.|++..|.|..
T Consensus 56 ~eEr~~v~~~~v~~~~grv---pviaG~g~~~t~eai~lak~a~~~Gad~il~v~PyY~k 112 (299)
T COG0329 56 LEERKEVLEAVVEAVGGRV---PVIAGVGSNSTAEAIELAKHAEKLGADGILVVPPYYNK 112 (299)
T ss_pred HHHHHHHHHHHHHHHCCCC---cEEEecCCCcHHHHHHHHHHHHhcCCCEEEEeCCCCcC
Confidence 3455555555544222111 15553 334455555444433233999999999874
No 443
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=36.04 E-value=1.3e+02 Score=20.23 Aligned_cols=60 Identities=15% Similarity=0.287 Sum_probs=36.6
Q ss_pred cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC-HHHHHHHHHHHHhCCCeEEEc
Q 014769 144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~~~~li~D 219 (419)
+...++..|.++..+.. ..+.+. .....+++.+|... ++ .+++++|.+++++-|-++|+|
T Consensus 10 ~~~~L~~~g~~v~~~~~--------~~~~l~----~~~~tll~i~~~~~----~~~~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 10 LYQLLEEQGVKVERWRK--------PYEALE----ADDGTLLVIGPDLR----LSEPEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHCCCeeEEecc--------cHHHhC----CCCCEEEEEeCCCC----CCchHHHHHHHHHHHcCCEEEEeC
Confidence 34455666777665431 233332 24456677776522 34 488999999999877777764
No 444
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=35.91 E-value=3.3e+02 Score=24.48 Aligned_cols=99 Identities=22% Similarity=0.292 Sum_probs=51.3
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCC-CCCC-----cHHHHhhcCCEEEEEeccCCCCcccCh-----HHHHHhhcCCccEEE
Q 014769 117 KQAVEVILSVLARPGANVLLPRP-GWPY-----YEGIAQRKQVEVRHFDLLPERNWEVDL-----DAVEALADKNTAAMV 185 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p-~~~~-----~~~~~~~~g~~~~~~~~~~~~~~~~~~-----~~l~~~~~~~~~~v~ 185 (419)
|.....+...+...|.+|++.+. .|.. ....+...|..+.... . ..|+ +.+..+...+...|+
T Consensus 86 TTt~akLA~~l~~~g~~V~li~~D~~r~~a~~ql~~~~~~~~i~~~~~~--~----~~dp~~~~~~~l~~~~~~~~D~Vi 159 (272)
T TIGR00064 86 TTTIAKLANKLKKQGKSVLLAAGDTFRAAAIEQLEEWAKRLGVDVIKQK--E----GADPAAVAFDAIQKAKARNIDVVL 159 (272)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCCCCHHHHHHHHHHHHhCCeEEEeCC--C----CCCHHHHHHHHHHHHHHCCCCEEE
Confidence 44444444555667777765543 3322 1223455564433221 1 1232 233333444567788
Q ss_pred EeCCCC-ccccCCCHHHHHHHHHHHH------hCCCeEEEcccc
Q 014769 186 IINPGN-PCGNVFTYHHLQEIAEMAR------KLRVMVVADEVY 222 (419)
Q Consensus 186 i~~p~n-ptG~~~~~~~l~~i~~~~~------~~~~~li~De~~ 222 (419)
+-+|.. +. -..-.++++++.+.+. ..+.++++|...
T Consensus 160 IDT~G~~~~-d~~~~~el~~~~~~~~~~~~~~~~~~~LVl~a~~ 202 (272)
T TIGR00064 160 IDTAGRLQN-KVNLMDELKKIKRVIKKVDKDAPDEVLLVLDATT 202 (272)
T ss_pred EeCCCCCcc-hHHHHHHHHHHHHHHhcccCCCCceEEEEEECCC
Confidence 877743 32 2222346777777777 667888888753
No 445
>PRK03892 ribonuclease P protein component 3; Provisional
Probab=35.66 E-value=2.8e+02 Score=23.72 Aligned_cols=29 Identities=14% Similarity=0.180 Sum_probs=21.2
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.++.-..--...++++.+++++|++++++
T Consensus 143 ~~G~~Rar~L~~~r~~l~L~rKYd~P~VI 171 (216)
T PRK03892 143 ANPYERANILRFMMKAWQLVNKYKVPRFI 171 (216)
T ss_pred hCchhHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 34555555667789999999999886664
No 446
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=35.27 E-value=3.6e+02 Score=24.83 Aligned_cols=144 Identities=19% Similarity=0.202 Sum_probs=78.5
Q ss_pred CChHHHHHHHHHHHhCCCC----CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769 59 RTAVEAEDAIVDAVRSGKF----NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~----~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~v 134 (419)
|.-.+.++-+.+++.+... -.|....|.......|++-+. -+..+++++-++..|= .++.+... -.|
T Consensus 42 paLd~~~~G~~~aLk~~G~~n~~i~~~na~~~~~~a~~iarql~------~~~~dviv~i~tp~Aq-~~~s~~~~--iPV 112 (322)
T COG2984 42 PALDAAREGVKEALKDAGYKNVKIDYQNAQGDLGTAAQIARQLV------GDKPDVIVAIATPAAQ-ALVSATKT--IPV 112 (322)
T ss_pred hhHHHHHHHHHHHHHhcCccCeEEEeecCCCChHHHHHHHHHhh------cCCCcEEEecCCHHHH-HHHHhcCC--CCE
Confidence 3345555666666654322 145566788888888888883 3445777777766653 33333322 234
Q ss_pred EeeC---CCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH---HHHhhcCCccEE-EEeCCCCccccCCCHHHHHHHHH
Q 014769 135 LLPR---PGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA---VEALADKNTAAM-VIINPGNPCGNVFTYHHLQEIAE 207 (419)
Q Consensus 135 lv~~---p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~---l~~~~~~~~~~v-~i~~p~nptG~~~~~~~l~~i~~ 207 (419)
++.. |.-......++.-|..++-+. + ..++++ |-+.+-++.+.+ ++.+|+.+ .+...++++.+
T Consensus 113 V~aavtd~v~a~Lv~~~~~pg~NvTGvs-----D-~~~v~q~i~lik~~~Pnak~Igv~Y~p~E~----ns~~l~eelk~ 182 (322)
T COG2984 113 VFAAVTDPVGAKLVKSLEQPGGNVTGVS-----D-LLPVAQQIELIKALLPNAKSIGVLYNPGEA----NSVSLVEELKK 182 (322)
T ss_pred EEEccCchhhccCCccccCCCCceeecC-----C-cchHHHHHHHHHHhCCCCeeEEEEeCCCCc----ccHHHHHHHHH
Confidence 4332 222111222222333444332 1 122332 223344565555 78888654 35566899999
Q ss_pred HHHhCCCeEEEccc
Q 014769 208 MARKLRVMVVADEV 221 (419)
Q Consensus 208 ~~~~~~~~li~De~ 221 (419)
.+++.|+-+++=.+
T Consensus 183 ~A~~~Gl~vve~~v 196 (322)
T COG2984 183 EARKAGLEVVEAAV 196 (322)
T ss_pred HHHHCCCEEEEEec
Confidence 99999998886433
No 447
>PF13407 Peripla_BP_4: Periplasmic binding protein domain; PDB: 3BRS_B 3GBP_A 3GA5_A 1GCG_A 1GCA_A 3H75_A 3D02_A 3L49_B 3EJW_B 3T95_A ....
Probab=35.00 E-value=98 Score=26.99 Aligned_cols=65 Identities=17% Similarity=0.237 Sum_probs=38.9
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
...++..|..+..+ .+...+..-..+.+++++..+...+++..+ .++. ...+++.|.+.|+.+|.
T Consensus 21 ~~~a~~~g~~~~~~-~~~~~d~~~q~~~i~~~i~~~~d~Iiv~~~-~~~~-------~~~~l~~~~~~gIpvv~ 85 (257)
T PF13407_consen 21 KAAAKELGYEVEIV-FDAQNDPEEQIEQIEQAISQGVDGIIVSPV-DPDS-------LAPFLEKAKAAGIPVVT 85 (257)
T ss_dssp HHHHHHHTCEEEEE-EESTTTHHHHHHHHHHHHHTTESEEEEESS-STTT-------THHHHHHHHHTTSEEEE
T ss_pred HHHHHHcCCEEEEe-CCCCCCHHHHHHHHHHHHHhcCCEEEecCC-CHHH-------HHHHHHHHhhcCceEEE
Confidence 45667778888775 122222223345667777777777775543 3321 34566667788997776
No 448
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=34.97 E-value=2.3e+02 Score=25.71 Aligned_cols=84 Identities=10% Similarity=0.154 Sum_probs=43.9
Q ss_pred cHHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 115 GCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 115 g~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
+..+++..+-.+- .-| |.|++..|.|....+-.. +. -...+.++.. +.++++...|.. |
T Consensus 80 ~t~~ai~~a~~A~-~~Gad~v~v~pP~y~~~~~~~l--------~~---------~f~~ia~a~~-~lpv~iYn~P~~-t 139 (294)
T TIGR02313 80 NHDETLELTKFAE-EAGADAAMVIVPYYNKPNQEAL--------YD---------HFAEVADAVP-DFPIIIYNIPGR-A 139 (294)
T ss_pred hHHHHHHHHHHHH-HcCCCEEEEcCccCCCCCHHHH--------HH---------HHHHHHHhcc-CCCEEEEeCchh-c
Confidence 3345555554443 345 889999998875321000 00 0122222221 345666666665 7
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
|..++.+.+.+|++-+ -|+.-|=|.
T Consensus 140 g~~l~~~~l~~L~~~~--pnv~giK~s 164 (294)
T TIGR02313 140 AQEIAPKTMARLRKDC--PNIVGAKES 164 (294)
T ss_pred CcCCCHHHHHHHHhhC--CCEEEEEeC
Confidence 8888866666555422 255555553
No 449
>KOG1465 consensus Translation initiation factor 2B, beta subunit (eIF-2Bbeta/GCD7) [Translation, ribosomal structure and biogenesis]
Probab=34.88 E-value=3.6e+02 Score=24.63 Aligned_cols=132 Identities=18% Similarity=0.184 Sum_probs=70.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhh----CC----------CCCCCCcEEEcccHHHHHHHHHHHhcCCCC--eEEee--CC
Q 014769 78 NCYATNSGIPPARRAIADYLSRD----LP----------YKLSADDVYVTLGCKQAVEVILSVLARPGA--NVLLP--RP 139 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~----~~----------~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--~vlv~--~p 139 (419)
..|....+...+|+.+.+-+++. -+ -.+..++|++|.|.+--....+....++|. +|++. .|
T Consensus 119 ~~~~S~~~~~~lr~~~i~~I~eli~Eie~~~E~Ia~Qa~ehihsnEviLT~g~SrTV~~FL~~A~kk~Rkf~viVaE~~p 198 (353)
T KOG1465|consen 119 NKKLSSADAKKLRKDLIEGIKELITEIEGSRENIAVQAIEHIHSNEVILTLGSSRTVENFLKHAAKKGRKFRVIVAEGAP 198 (353)
T ss_pred ccccccccHHHHHHHHHHHHHHHHHHHhhhhHhHHHHHHHHhccCceEEecCccHHHHHHHHHHHhccCceEEEEeecCC
Confidence 34544444455666665555441 11 024557899999988888888877776654 34444 35
Q ss_pred CCCCcHHH--HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 140 GWPYYEGI--AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 140 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
.+.++... +...|++...++ | .++-..+.+-.++++-++.--+-|-+....-...++..++.|-+.++
T Consensus 199 ~~qgH~~Ak~la~~giettVI~---------d-aaVfA~MsrVnKVIigt~avl~NGgl~~~~G~~~vAlaAk~h~vPv~ 268 (353)
T KOG1465|consen 199 NNQGHELAKPLAQAGIETTVIP---------D-AAVFAMMSRVNKVIIGTHAVLANGGLRAPSGVHTVALAAKHHSVPVI 268 (353)
T ss_pred cccchHhhHHHHHcCCeeEEec---------c-HHHHHHhhhcceEEEEeeeEecCCCeeccchHHHHHHHHHhcCCcEE
Confidence 55543222 224466655543 3 23333333223444434332222333333445667777788888777
Q ss_pred Ec
Q 014769 218 AD 219 (419)
Q Consensus 218 ~D 219 (419)
+=
T Consensus 269 Vl 270 (353)
T KOG1465|consen 269 VL 270 (353)
T ss_pred Ee
Confidence 63
No 450
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=33.47 E-value=2.1e+02 Score=21.50 Aligned_cols=94 Identities=15% Similarity=0.136 Sum_probs=48.4
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNV 196 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~ 196 (419)
+.+..++..+...|=+++.... ....++..|+++..+.-.++.+ + ..+...+.. +..-++++.|. +.-..
T Consensus 12 ~~~~~~a~~l~~~G~~i~AT~g----Ta~~L~~~Gi~~~~v~~~~~~g---~-~~i~~~i~~~g~idlVIn~~~-~~~~~ 82 (112)
T cd00532 12 AMLVDLAPKLSSDGFPLFATGG----TSRVLADAGIPVRAVSKRHEDG---E-PTVDAAIAEKGKFDVVINLRD-PRRDR 82 (112)
T ss_pred HHHHHHHHHHHHCCCEEEECcH----HHHHHHHcCCceEEEEecCCCC---C-cHHHHHHhCCCCEEEEEEcCC-CCccc
Confidence 3334444444444545543332 2233344676666554322211 2 334555555 55556666664 11101
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De 220 (419)
....+-..|.+.|.++++.++.+.
T Consensus 83 ~~~~dg~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 83 CTDEDGTALLRLARLYKIPVTTPN 106 (112)
T ss_pred ccCCChHHHHHHHHHcCCCEEECH
Confidence 112336789999999999998764
No 451
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase. Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1-4)-alpha-D-glucano}trehalose trehalohydrolase (EC 3.2.1.141). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.
Probab=33.38 E-value=80 Score=31.69 Aligned_cols=29 Identities=28% Similarity=0.424 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 158 ~~~e~k~lV~~aH~~Gi~VilD~V~NH~~ 186 (542)
T TIGR02402 158 GPDDLKALVDAAHGLGLGVILDVVYNHFG 186 (542)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCCCC
Confidence 57899999999999999999999998754
No 452
>PF03652 UPF0081: Uncharacterised protein family (UPF0081); InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VII-colicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma parvum (Ureaplasma urealyticum biotype 1) (Q9PQY7 from SWISSPROT, []). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase []. This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus, 0005737 cytoplasm; PDB: 1NU0_A 1OVQ_A 1NMN_B 1VHX_B 1IV0_A.
Probab=32.37 E-value=1.8e+02 Score=22.85 Aligned_cols=58 Identities=21% Similarity=0.302 Sum_probs=38.7
Q ss_pred ccChHHHHHhhcC-CccEEEEeCCCCccccCCC-HHHHHHHHHHHHhC--CC-eEEEcccccc
Q 014769 167 EVDLDAVEALADK-NTAAMVIINPGNPCGNVFT-YHHLQEIAEMARKL--RV-MVVADEVYGH 224 (419)
Q Consensus 167 ~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~--~~-~li~De~~~~ 224 (419)
..+.+.|.+.+.+ ++..+++-.|-|..|..-+ ....++.++.+.+. ++ +.++||-|+.
T Consensus 37 ~~~~~~l~~li~~~~i~~iVvGlP~~~~G~~~~~~~~v~~f~~~L~~~~~~ipV~~~DEr~TT 99 (135)
T PF03652_consen 37 EKDIEELKKLIEEYQIDGIVVGLPLNMDGSESEQARRVRKFAEELKKRFPGIPVILVDERLTT 99 (135)
T ss_dssp CCCHHHHHHHHHHCCECEEEEEEEBBCTSSC-CCHHHHHHHHHHHHHHH-TSEEEEEECSCSH
T ss_pred chHHHHHHHHHHHhCCCEEEEeCCcccCCCccHHHHHHHHHHHHHHHhcCCCcEEEECCChhH
Confidence 5678888888765 4678888899877776433 33445555554443 55 6778988774
No 453
>PF00290 Trp_syntA: Tryptophan synthase alpha chain; InterPro: IPR002028 Tryptophan synthase (4.2.1.20 from EC) catalyzes the last step in the biosynthesis of tryptophan [, ]: L-serine + 1-(indol-3-yl)glycerol 3-phosphate = L-tryptophan + glyceraldehyde 3-phosphate + H2O It has two functional domains, each found in bacteria and plants on a separate subunit. In Escherichia coli, the 2 subunits, A and B, are encoded by the trpA and trpB genes respectively. The alpha chain is for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate and the beta chain IPR006653 from INTERPRO is for the synthesis of tryptophan from indole and serine. In fungi the two domains are fused together in a single multifunctional protein, in the order: (NH2-A-B-COOH) [, ]. The two domains of the Neurospora crassa polypeptide are linked by a connector of 54-amino acid residues that has less than 25% identity to the 45-residue connector of the Saccharomyces cerevisiae (Baker's yeast) polypeptide. Two acidic residues are believed to serve as proton donors/acceptors in the enzyme's catalytic mechanism.; GO: 0004834 tryptophan synthase activity, 0006568 tryptophan metabolic process; PDB: 1TJR_B 1RD5_B 1K8X_A 1QOQ_A 1KFE_A 1KFB_A 2CLO_A 1TTP_A 2RH9_A 1K7F_A ....
Probab=32.23 E-value=3.7e+02 Score=24.00 Aligned_cols=155 Identities=12% Similarity=0.167 Sum_probs=87.7
Q ss_pred CCCCeeeccCC--CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g--~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.|-++|-+++- ||..+ -|.++++..+++.++. . ...+-+.+.+.-.+ ..+ --+++.+=..
T Consensus 36 ~GaD~iEiGiPfSDP~AD-----GpvIq~A~~rAL~~G~----~----~~~~~~~~~~ir~~----~~~-~pivlm~Y~N 97 (259)
T PF00290_consen 36 AGADIIEIGIPFSDPVAD-----GPVIQKASQRALKNGF----T----LEKIFELVKEIRKK----EPD-IPIVLMTYYN 97 (259)
T ss_dssp TTBSSEEEE--SSSCTTS-----SHHHHHHHHHHHHTT----------HHHHHHHHHHHHHH----CTS-SEEEEEE-HH
T ss_pred cCCCEEEECCCCCCCCCC-----CHHHHHHHHHHHHCCC----C----HHHHHHHHHHHhcc----CCC-CCEEEEeecc
Confidence 38888887765 44332 3788899888887642 1 12333333333212 111 1344433222
Q ss_pred ----HHHHHHHHHhcCCC-CeEEeeCCCCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769 118 ----QAVEVILSVLARPG-ANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 118 ----~al~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
.++...+..+.+-| |.+++++.-+.. +...+...|+..+.+-- | ..+.+.++.........++++.-
T Consensus 98 ~i~~~G~e~F~~~~~~aGvdGlIipDLP~ee~~~~~~~~~~~gl~~I~lv~-p----~t~~~Ri~~i~~~a~gFiY~vs~ 172 (259)
T PF00290_consen 98 PIFQYGIERFFKEAKEAGVDGLIIPDLPPEESEELREAAKKHGLDLIPLVA-P----TTPEERIKKIAKQASGFIYLVSR 172 (259)
T ss_dssp HHHHH-HHHHHHHHHHHTEEEEEETTSBGGGHHHHHHHHHHTT-EEEEEEE-T----TS-HHHHHHHHHH-SSEEEEESS
T ss_pred HHhccchHHHHHHHHHcCCCEEEEcCCChHHHHHHHHHHHHcCCeEEEEEC-C----CCCHHHHHHHHHhCCcEEEeecc
Confidence 23444555555545 899999876643 45566778887665432 2 13556666666556778888888
Q ss_pred CCccccCCC-HHHHHHHHHHHHhCC-CeEE
Q 014769 190 GNPCGNVFT-YHHLQEIAEMARKLR-VMVV 217 (419)
Q Consensus 190 ~nptG~~~~-~~~l~~i~~~~~~~~-~~li 217 (419)
...||...+ ..++.+.++.++++. ..++
T Consensus 173 ~GvTG~~~~~~~~l~~~i~~ik~~~~~Pv~ 202 (259)
T PF00290_consen 173 MGVTGSRTELPDELKEFIKRIKKHTDLPVA 202 (259)
T ss_dssp SSSSSTTSSCHHHHHHHHHHHHHTTSS-EE
T ss_pred CCCCCCcccchHHHHHHHHHHHhhcCcceE
Confidence 888998643 466888888888763 4443
No 454
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=32.02 E-value=3.9e+02 Score=24.24 Aligned_cols=107 Identities=15% Similarity=0.131 Sum_probs=62.7
Q ss_pred cEEEcccHHHHHHHHHHHhcC---CCCeEE-eeCCCCCCcHHHHhhc-CCEEEEEeccCCCCcccChH-HHHHhhcCCcc
Q 014769 109 DVYVTLGCKQAVEVILSVLAR---PGANVL-LPRPGWPYYEGIAQRK-QVEVRHFDLLPERNWEVDLD-AVEALADKNTA 182 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~---~gd~vl-v~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~ 182 (419)
-|++|-+..+-+...+..+.. +.+.++ +.+.+........+.. ...+..+.....-++.--.. -++.++.....
T Consensus 7 ~iiv~yn~~~~l~~~l~~l~~~~~~~~~iv~vDn~s~d~~~~~~~~~~~~~v~~i~~~~NlG~agg~n~g~~~a~~~~~~ 86 (305)
T COG1216 7 IIIVTYNRGEDLVECLASLAAQTYPDDVIVVVDNGSTDGSLEALKARFFPNVRLIENGENLGFAGGFNRGIKYALAKGDD 86 (305)
T ss_pred EEEEecCCHHHHHHHHHHHhcCCCCCcEEEEccCCCCCCCHHHHHhhcCCcEEEEEcCCCccchhhhhHHHHHHhcCCCc
Confidence 456665555555555555533 334443 5667777666666655 34566666544333322222 33444443333
Q ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
.+++.||. ++++++.++++.+.+++++...++-
T Consensus 87 ~~l~LN~D----~~~~~~~l~~ll~~~~~~~~~~~~~ 119 (305)
T COG1216 87 YVLLLNPD----TVVEPDLLEELLKAAEEDPAAGVVG 119 (305)
T ss_pred EEEEEcCC----eeeChhHHHHHHHHHHhCCCCeEee
Confidence 56776666 6678889999999999986655543
No 455
>PRK07718 fliL flagellar basal body-associated protein FliL; Reviewed
Probab=31.81 E-value=58 Score=25.95 Aligned_cols=52 Identities=10% Similarity=0.284 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
|.+++.+...++......-..+.|...||+.+.+.++...+-+ .-.+|+||+
T Consensus 87 p~Ird~ii~~L~~~~~~~l~~~~G~~~Lr~el~~~in~~l~~g-~V~~Vyft~ 138 (142)
T PRK07718 87 FQVKNIIIEELADMNAEDFKGKKGLEALKEQLKEKINNLMQEG-KVEKVYITS 138 (142)
T ss_pred hhhHHHHHHHHHcCCHHHhcChhHHHHHHHHHHHHHHHhhccC-ceEEEEEEe
Confidence 3455566556665554445556888999999999887755422 455676664
No 456
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=31.38 E-value=1.7e+02 Score=25.93 Aligned_cols=95 Identities=13% Similarity=0.150 Sum_probs=51.8
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc-ChHHHHHhhcCCccEEEEe
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV-DLDAVEALADKNTAAMVII 187 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i~ 187 (419)
+|++-.|++++-.++-... +.|. |++..-+-++- ..... ......+. ..++ +.+.+...+.++... +++
T Consensus 2 ~ILvlgGTtE~r~la~~L~-~~g~-v~~sv~t~~g~-~~~~~-~~~~~~v~-----~G~lg~~~~l~~~l~~~~i~-~vI 71 (249)
T PF02571_consen 2 KILVLGGTTEGRKLAERLA-EAGY-VIVSVATSYGG-ELLKP-ELPGLEVR-----VGRLGDEEGLAEFLRENGID-AVI 71 (249)
T ss_pred EEEEEechHHHHHHHHHHH-hcCC-EEEEEEhhhhH-hhhcc-ccCCceEE-----ECCCCCHHHHHHHHHhCCCc-EEE
Confidence 5888999999987755444 5556 55443322221 11111 10111111 1245 788888888654322 334
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
..+.|.-..++ +-+.+.|++.|+..+
T Consensus 72 DATHPfA~~is----~na~~a~~~~~ipyl 97 (249)
T PF02571_consen 72 DATHPFAAEIS----QNAIEACRELGIPYL 97 (249)
T ss_pred ECCCchHHHHH----HHHHHHHhhcCcceE
Confidence 44555555554 667778888887655
No 457
>PF08986 DUF1889: Domain of unknown function (DUF1889); InterPro: IPR015079 This family consist of hypothetical bacterial proteins. ; PDB: 2JN8_A 2ES9_A.
Probab=31.13 E-value=17 Score=26.18 Aligned_cols=81 Identities=17% Similarity=0.167 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-------cCCCCeE
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-------ARPGANV 134 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-------~~~gd~v 134 (419)
|.+++...+....-+...-.|..-.....+-|-+||++ .|++.++++| ...|..++.+.-+.-- ...|.+|
T Consensus 22 pavIdKALDFIggMntSas~P~sMdESTAKGi~KyL~e-lGvPasa~dv-~aRg~qeGWn~gFT~k~agwaeki~sG~ri 99 (119)
T PF08986_consen 22 PAVIDKALDFIGGMNTSASVPHSMDESTAKGIFKYLKE-LGVPASAADV-TARGEQEGWNPGFTEKVAGWAEKIASGERI 99 (119)
T ss_dssp --HHHHHHHHHHTS-TT-SS--HCCCHHHHHHHHHHHH-CT----HHHH-HHHHHHCT--HHHHHHHHHHHHHHHCT---
T ss_pred hHHHHHHHHHhcccccCCCCCCccchHHHHHHHHHHHH-cCCCCCHHHH-HHhcccccCChhHHHHHHHHHHHHhcCCee
Confidence 34444444554433332333434456788889999976 7777766665 3456666666554321 2378999
Q ss_pred EeeCCCCCCc
Q 014769 135 LLPRPGWPYY 144 (419)
Q Consensus 135 lv~~p~~~~~ 144 (419)
++-+|.|++.
T Consensus 100 vIKnPEyFs~ 109 (119)
T PF08986_consen 100 VIKNPEYFSS 109 (119)
T ss_dssp --SSGGGS-H
T ss_pred eecChHHHHH
Confidence 9999999863
No 458
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=31.03 E-value=1.9e+02 Score=21.47 Aligned_cols=50 Identities=12% Similarity=0.056 Sum_probs=30.0
Q ss_pred HHHHHHhcCeEeecCCCCCCCCeEEEEee--c----CHHHHH-HHHHHHHHHHHHHh
Q 014769 367 ALKLAKEESVIVTPGIYVGLKNWLRIAFC--A----EPSALK-DGLGRMKAFCQRHT 416 (419)
Q Consensus 367 ~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~----~~~~l~-~~l~~l~~~~~~~~ 416 (419)
....|.++||.+.|...-...+-+...+. . +++++. +..+.|.+.+.+..
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~E~~~~~~~~~e~v~~~~~~~i~~~~~~v~ 96 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSALEMLQNLARTAEEVFTDLSEIMRNALEEIF 96 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehhhhhcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 56677899999999765443343333331 1 444444 66666776666543
No 459
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=31.03 E-value=63 Score=27.30 Aligned_cols=35 Identities=29% Similarity=0.304 Sum_probs=27.7
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+++.++|.--|+.|.... ..++.+++++||+.+|.
T Consensus 156 ~Pa~VicEi~~~dG~mar---~~~~~~fa~~h~l~~it 190 (203)
T COG0108 156 KPAGVICEIMNDDGTMAR---LPELEEFAKEHGLPVIT 190 (203)
T ss_pred CCcEEEEEEeCCCccccC---hHHHHHHHHHcCCcEEE
Confidence 456777877888999998 66677788899997764
No 460
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=30.96 E-value=5e+02 Score=25.11 Aligned_cols=94 Identities=11% Similarity=0.009 Sum_probs=47.1
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCC-CCC--Cc---HHHHhhcCCEEEEEeccCCCCcccChHHHHHhh---cC--CccEEE
Q 014769 117 KQAVEVILSVLARPGANVLLPRP-GWP--YY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA---DK--NTAAMV 185 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p-~~~--~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~---~~--~~~~v~ 185 (419)
|..+..+...+...|.+|.+.+. +|. .. ...+...|+.+... .+.+.+.+.+ .. +...|+
T Consensus 255 TTTiaKLA~~L~~~GkkVglI~aDt~RiaAvEQLk~yae~lgipv~v~---------~d~~~L~~aL~~lk~~~~~DvVL 325 (436)
T PRK11889 255 TTTLAKMAWQFHGKKKTVGFITTDHSRIGTVQQLQDYVKTIGFEVIAV---------RDEAAMTRALTYFKEEARVDYIL 325 (436)
T ss_pred HHHHHHHHHHHHHcCCcEEEEecCCcchHHHHHHHHHhhhcCCcEEec---------CCHHHHHHHHHHHHhccCCCEEE
Confidence 55555555566666766654433 343 11 22233445444322 1344554444 21 356777
Q ss_pred EeCCC-CccccCCCHHHHHHHHHHHH---hCCCeEEEccccc
Q 014769 186 IINPG-NPCGNVFTYHHLQEIAEMAR---KLRVMVVADEVYG 223 (419)
Q Consensus 186 i~~p~-nptG~~~~~~~l~~i~~~~~---~~~~~li~De~~~ 223 (419)
+-.+. |+ -+.+.+.++.++.+ .+.+++++|....
T Consensus 326 IDTaGRs~----kd~~lm~EL~~~lk~~~PdevlLVLsATtk 363 (436)
T PRK11889 326 IDTAGKNY----RASETVEEMIETMGQVEPDYICLTLSASMK 363 (436)
T ss_pred EeCccccC----cCHHHHHHHHHHHhhcCCCeEEEEECCccC
Confidence 77763 33 23344555555544 3556777876543
No 461
>PLN00191 enolase
Probab=30.94 E-value=2.1e+02 Score=28.05 Aligned_cols=98 Identities=6% Similarity=-0.032 Sum_probs=57.4
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccc
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 194 (419)
++.+++... ..+.++-+-+++++|....-....+.+... ..+++-.++.+..+++.+.+.+..+..-++..-++.-.|
T Consensus 296 s~~e~i~~~-~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~-~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl~qiGG 373 (457)
T PLN00191 296 SGDELIDLY-KEFVSDYPIVSIEDPFDQDDWEHWAKLTSL-EDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKVNQIGT 373 (457)
T ss_pred CHHHHHHHH-HHHhhcCCcEEEECCCCcccHHHHHHHHcc-CCCcEEccCcccCCHHHHHHHHHhCCCCEEEecccccCC
Confidence 445555554 444444467789999865322222222111 222332233334568889888887665566666665433
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
. .+..+++++|+++|+.+++
T Consensus 374 I----Tea~~~a~lA~~~G~~~~i 393 (457)
T PLN00191 374 V----TESIEAVKMSKAAGWGVMT 393 (457)
T ss_pred H----HHHHHHHHHHHHCCCEEEe
Confidence 3 2478999999999988776
No 462
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=30.84 E-value=5e+02 Score=25.07 Aligned_cols=115 Identities=19% Similarity=0.170 Sum_probs=65.2
Q ss_pred hhCCCCCCCCcEEEccc-----HHHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChH
Q 014769 99 RDLPYKLSADDVYVTLG-----CKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLD 171 (419)
Q Consensus 99 ~~~~~~~~~~~i~~t~g-----~~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 171 (419)
+..|-++-+..+++-.| =+..+..+...+...+ +|+..+-.=.. +.-.++.+|.....+.+..+ .+++
T Consensus 84 RVLGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~-~vLYVsGEES~~QiklRA~RL~~~~~~l~l~aE----t~~e 158 (456)
T COG1066 84 RVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG-KVLYVSGEESLQQIKLRADRLGLPTNNLYLLAE----TNLE 158 (456)
T ss_pred hhhcCCcccccEEEEccCCCCCHHHHHHHHHHHHHhcC-cEEEEeCCcCHHHHHHHHHHhCCCccceEEehh----cCHH
Confidence 33454666666655433 3445555555555556 77766554443 34455666654433333332 4788
Q ss_pred HHHHhhcC-CccEEEEeCCC---C------ccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 172 AVEALADK-NTAAMVIINPG---N------PCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 172 ~l~~~~~~-~~~~v~i~~p~---n------ptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.+.+.+.. ++..+++-+-+ + |.++..=.+--.+|.++++++|+.++.
T Consensus 159 ~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 159 DIIAELEQEKPDLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHhcCCCEEEEeccceeecccccCCCCcHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 88877765 56666665542 2 223333344456788889999986543
No 463
>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot. GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....
Probab=30.80 E-value=2.3e+02 Score=21.16 Aligned_cols=21 Identities=29% Similarity=0.374 Sum_probs=16.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEE
Q 014769 198 TYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~ 218 (419)
+.++.++|.+++++++..+.+
T Consensus 98 ~~~~~~~l~~~a~~~~~~~~V 118 (120)
T PF01408_consen 98 TLEEAEELVEAAKEKGVKVMV 118 (120)
T ss_dssp SHHHHHHHHHHHHHHTSCEEE
T ss_pred CHHHHHHHHHHHHHhCCEEEE
Confidence 677788888888888877655
No 464
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=30.53 E-value=85 Score=23.70 Aligned_cols=52 Identities=17% Similarity=0.105 Sum_probs=31.0
Q ss_pred CHHHHHHHHHHhcCeEeecC---CCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 362 DDIEFALKLAKEESVIVTPG---IYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~g---~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
|+..+...| .++|+.+.-- ..|-..+-.=+=++.++++++++++.|++.+++
T Consensus 12 Da~~l~~~L-~~~g~~~TkLsstGGFLr~GNtTlliGvede~v~~vl~iIk~~c~~ 66 (109)
T PF06153_consen 12 DADDLSDAL-NENGFRVTKLSSTGGFLREGNTTLLIGVEDEKVDEVLEIIKENCKK 66 (109)
T ss_dssp HHHHHHHHH-HHTT--EEEEEEEETTTTEEEEEEEEEEEGGGHHHHHHHHHHHH--
T ss_pred hHHHHHHHH-HHCCceEEEEecccceeccCCEEEEEEecHHHHHHHHHHHHHhhcC
Confidence 345555555 6679876422 234333333344477889999999999998865
No 465
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=30.50 E-value=1.7e+02 Score=26.07 Aligned_cols=95 Identities=13% Similarity=0.163 Sum_probs=0.0
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
.|++..|+++ =..+...|.+.|..|++..-+-.+-......-+..+.. ..+|.+.+...+. ....-+++.
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~~~g~~~v~~--------g~l~~~~l~~~l~-~~~i~~VID 71 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYPIHQALTVHT--------GALDPQELREFLK-RHSIDILVD 71 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCccccccccCCceEEE--------CCCCHHHHHHHHH-hcCCCEEEE
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
...|.-..++ +-+.+.|++.|+..+
T Consensus 72 AtHPfA~~is----~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 72 ATHPFAAQIT----TNATAVCKELGIPYV 96 (256)
T ss_pred cCCHHHHHHH----HHHHHHHHHhCCcEE
No 466
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=30.46 E-value=4.9e+02 Score=24.90 Aligned_cols=54 Identities=15% Similarity=0.167 Sum_probs=29.3
Q ss_pred CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH---HHHhcCCCCeEEee
Q 014769 82 TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI---LSVLARPGANVLLP 137 (419)
Q Consensus 82 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~---~~~l~~~gd~vlv~ 137 (419)
.|.|..+.-+.-.+|.+..-...-.+..++||.++ .++-.+ ...+ +.|-.+++.
T Consensus 16 hp~gc~~~v~~qi~~~~~~~~~~~ggK~aLVTGaS-sGIGlA~~IA~al-~~GA~Vi~v 72 (398)
T PRK13656 16 HPVGCEANVKEQIEYVKAQGPIANGPKKVLVIGAS-SGYGLASRIAAAF-GAGADTLGV 72 (398)
T ss_pred CCHHHHHHHHHHHHHHHhcCCcCCCCCEEEEECCC-chHhHHHHHHHHH-HcCCeEEEE
Confidence 45677766666667776532222233455555444 455444 5667 777654443
No 467
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=30.39 E-value=3e+02 Score=22.37 Aligned_cols=89 Identities=20% Similarity=0.080 Sum_probs=47.1
Q ss_pred EEEccc-HHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769 110 VYVTLG-CKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 110 i~~t~g-~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
|+++.+ |.-+-. ++..|.+.|-.|....-.-..... ...+..+..+. .|.+.+.+++. +...++.+-
T Consensus 1 I~V~GatG~vG~~-l~~~L~~~~~~V~~~~R~~~~~~~-----~~~~~~~~~d~-----~d~~~~~~al~-~~d~vi~~~ 68 (183)
T PF13460_consen 1 ILVFGATGFVGRA-LAKQLLRRGHEVTALVRSPSKAED-----SPGVEIIQGDL-----FDPDSVKAALK-GADAVIHAA 68 (183)
T ss_dssp EEEETTTSHHHHH-HHHHHHHTTSEEEEEESSGGGHHH-----CTTEEEEESCT-----TCHHHHHHHHT-TSSEEEECC
T ss_pred eEEECCCChHHHH-HHHHHHHCCCEEEEEecCchhccc-----ccccccceeee-----hhhhhhhhhhh-hcchhhhhh
Confidence 344443 444444 445555555555544322221111 33344444332 46788888887 455666554
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
+.++. +.+..+.+++.|++.++
T Consensus 69 ~~~~~----~~~~~~~~~~a~~~~~~ 90 (183)
T PF13460_consen 69 GPPPK----DVDAAKNIIEAAKKAGV 90 (183)
T ss_dssp HSTTT----HHHHHHHHHHHHHHTTS
T ss_pred hhhcc----ccccccccccccccccc
Confidence 43333 26667888888887654
No 468
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=30.29 E-value=56 Score=29.47 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-+..+..
T Consensus 50 t~~d~~~Lv~~~h~~gi~VilD~V~NH~~ 78 (316)
T PF00128_consen 50 TMEDFKELVDAAHKRGIKVILDVVPNHTS 78 (316)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEETSEEE
T ss_pred hhhhhhhhhhccccccceEEEeeeccccc
Confidence 36889999999999999999999987654
No 469
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=29.53 E-value=4.1e+02 Score=24.04 Aligned_cols=98 Identities=15% Similarity=0.082 Sum_probs=50.7
Q ss_pred cChHHHHHhhcCC-ccEEEEeCC-CCccccCCC--------HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 168 VDLDAVEALADKN-TAAMVIINP-GNPCGNVFT--------YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 168 ~~~~~l~~~~~~~-~~~v~i~~p-~nptG~~~~--------~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
.|.+.+.+.+++. +..|+-+-. ++....-.. ..--..++++|++.|+.+|. +..++.|+|....++..
T Consensus 37 td~~~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lVh--iSTDyVFDG~~~~~Y~E 114 (281)
T COG1091 37 TDPDAVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLVH--ISTDYVFDGEKGGPYKE 114 (281)
T ss_pred cChHHHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEEE--eecceEecCCCCCCCCC
Confidence 4667777777654 444443332 233332222 22346788999999998775 33445566654333322
Q ss_pred cCCCCcEEEEecCCCcCC-------CC---CceeEEEEeeC
Q 014769 238 FGSIVPVITLGSISKRWL-------VP---GWRFGWLVTND 268 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~-------~~---G~r~G~~~~~~ 268 (419)
-+...+ +-+.+-||..| .+ =+|.+|+....
T Consensus 115 ~D~~~P-~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~ 154 (281)
T COG1091 115 TDTPNP-LNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEY 154 (281)
T ss_pred CCCCCC-hhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCC
Confidence 222111 22335566533 11 15678877654
No 470
>PF13872 AAA_34: P-loop containing NTP hydrolase pore-1
Probab=29.51 E-value=43 Score=30.39 Aligned_cols=27 Identities=15% Similarity=0.201 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHH-hCCCeEEEccccccc
Q 014769 199 YHHLQEIAEMAR-KLRVMVVADEVYGHL 225 (419)
Q Consensus 199 ~~~l~~i~~~~~-~~~~~li~De~~~~~ 225 (419)
..++++|+++|. ..+.+||.||+|..-
T Consensus 158 ~sRl~ql~~W~g~dfdgvivfDEcH~ak 185 (303)
T PF13872_consen 158 RSRLDQLVDWCGEDFDGVIVFDECHKAK 185 (303)
T ss_pred cchHHHHHHHHhcCCCceEEeccchhcC
Confidence 457899999995 468899999999863
No 471
>PF03460 NIR_SIR_ferr: Nitrite/Sulfite reductase ferredoxin-like half domain; InterPro: IPR005117 Sulphite reductases (SiRs) and related nitrite reductases (NiRs) catalyse the six-electron reduction reactions of sulphite to sulphide, and nitrite to ammonia, respectively. The Escherichia coli SiR enzyme is a complex composed of two proteins, a flavoprotein alpha-component (SiR-FP) and a hemoprotein beta-component (SiR-HP), and has an alpha(8)beta(4) quaternary structure []. SiR-FP contains both FAD and FMN, while SiR-HP contains a Fe(4)S(4) cluster coupled to a sirohaem through a cysteine bridge. Electrons are transferred from NADPH to FAD, and on to FMN in SiR-FP, from which they are transferred to the metal centre of SiR-HP, where they reduce the siroheme-bound sulphite. SiR-HP has a two-fold symmetry, which generates a distinctive three-domain alpha/beta fold that controls assembly and reactivity []. This entry describes the ferrodoxin-like (alpha/beta sandwich) domain, which consists of a duplication containing two subdomains of this fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3B0H_A 4GEP_A 2GEP_A 2AOP_A 5AOP_A 6GEP_A 4AOP_A 1AOP_A 3AOP_A 8GEP_A ....
Probab=29.18 E-value=47 Score=22.32 Aligned_cols=29 Identities=24% Similarity=0.390 Sum_probs=21.5
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
+.+.+.-|.|.+ +.+.++.|++++++++.
T Consensus 10 ~~v~~~~~~G~i-~~~~l~~la~ia~~yg~ 38 (69)
T PF03460_consen 10 YMVRIRIPGGRI-SAEQLRALAEIAEKYGD 38 (69)
T ss_dssp EEEEEB-GGGEE-EHHHHHHHHHHHHHHST
T ss_pred EEEEEeCCCEEE-CHHHHHHHHHHHHHhCC
Confidence 344445567887 88999999999999873
No 472
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=29.08 E-value=4.2e+02 Score=23.68 Aligned_cols=38 Identities=16% Similarity=0.297 Sum_probs=23.5
Q ss_pred CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccc
Q 014769 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV 221 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~ 221 (419)
+.+.++..+|.. ||..++.+.+.+|++ -.++.-|=|..
T Consensus 123 ~~pi~iYn~P~~-tg~~l~~~~~~~L~~---~~~v~giK~s~ 160 (281)
T cd00408 123 DLPVILYNIPGR-TGVDLSPETIARLAE---HPNIVGIKDSS 160 (281)
T ss_pred CCCEEEEECccc-cCCCCCHHHHHHHhc---CCCEEEEEeCC
Confidence 345566666655 788888776666664 23566565544
No 473
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=28.92 E-value=1.6e+02 Score=28.32 Aligned_cols=54 Identities=15% Similarity=0.159 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC--CeEEeeCCCC
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG--ANVLLPRPGW 141 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g--d~vlv~~p~~ 141 (419)
.+.+.+.-++.+.+++..++++.++...+..++.++..++..|. ..|+..++++
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 45566666777777888888999999999999999988887765 7888888876
No 474
>COG1580 FliL Flagellar basal body-associated protein [Cell motility and secretion]
Probab=28.28 E-value=80 Score=25.73 Aligned_cols=53 Identities=23% Similarity=0.153 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
|.+++++...+...+...-.++.|-..|+..|.+-++.....+..-.+|++|.
T Consensus 103 p~vrd~li~lfsskt~~eL~t~~Gke~Lk~ei~~~in~~L~~g~~V~dV~fT~ 155 (159)
T COG1580 103 PEVRDALLMLFSSKTAAELSTPEGKEKLKAEIKDRINTILKEGQVVKDVLFTN 155 (159)
T ss_pred HHHHHHHHHHHHhCCHHHhcCchhHHHHHHHHHHHHHHHHhcCCeeEEEeeeh
Confidence 55666666666655554555668889999999988877554333445666663
No 475
>PF00728 Glyco_hydro_20: Glycosyl hydrolase family 20, catalytic domain; InterPro: IPR015883 Glycoside hydrolase family 20 GH20 from CAZY comprises enzymes with several known activities; beta-hexosaminidase (3.2.1.52 from EC); lacto-N-biosidase (3.2.1.140 from EC). Carbonyl oxygen of the C-2 acetamido group of the substrate acts as the catalytic nucleophile/base in this family of enzymes. In the brain and other tissues, beta-hexosaminidase A degrades GM2 gangliosides; specifically, the enzyme hydrolyses terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides. There are 3 forms of beta-hexosaminidase: hexosaminidase A is a trimer, with one alpha, one beta-A and one beta-B chain; hexosaminidase B is a tetramer of two beta-A and two beta-B chains; and hexosaminidase S is a homodimer of alpha chains. The two beta chains are derived from the cleavage of a precursor. Mutations in the beta-chain lead to Sandhoff disease, a lysosomal storage disorder characterised by accumulation of GM2 ganglioside [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds; PDB: 3RPM_A 1C7T_A 1QBA_A 1QBB_A 1C7S_A 3RCN_A 2YL8_A 2YL6_A 2YLL_A 2YL5_C ....
Probab=28.12 E-value=65 Score=30.03 Aligned_cols=67 Identities=16% Similarity=0.373 Sum_probs=39.2
Q ss_pred HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 146 GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 146 ~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
..+..++.+...+.+....+|.+....+.++-.... ..++.+ |..++.+++++|++.|+++|+-||-
T Consensus 25 d~ma~~k~N~lhlhl~D~~~~~~~~~~~p~l~~~ga-----~~~~~~-~~~yT~~di~~lv~yA~~~gI~VIP 91 (351)
T PF00728_consen 25 DQMAYYKLNVLHLHLSDDQGFRLESKSYPELTEKGA-----YRPSDA-GGYYTKEDIRELVAYAKERGIEVIP 91 (351)
T ss_dssp HHHHHTT-SEEEEEEESSTCB-BEBSTSTHHHHTTT-----ESTTCT-ESEBEHHHHHHHHHHHHHTT-EEEE
T ss_pred HHHHHcCCcEEEEEEecCCCCccccCCCccccccCc-----cccccc-cccCCHHHHHHHHHHHHHcCCceee
Confidence 445566778888887666666665433322211100 000002 3389999999999999999987663
No 476
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.12 E-value=2.5e+02 Score=26.10 Aligned_cols=105 Identities=21% Similarity=0.260 Sum_probs=66.1
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCC-CCCC-----cHHHHhhcCCEEEEEeccCCCC-cccChHHHHHhhcCCccEEEE
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRP-GWPY-----YEGIAQRKQVEVRHFDLLPERN-WEVDLDAVEALADKNTAAMVI 186 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p-~~~~-----~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~v~i 186 (419)
.|=|..+--+...+.+.|-+|++... +|-. .....+..|++++.-+ ...+ -.+-.+.++.+...+...|++
T Consensus 150 ~GKTTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~--~G~DpAaVafDAi~~Akar~~Dvvli 227 (340)
T COG0552 150 VGKTTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGK--EGADPAAVAFDAIQAAKARGIDVVLI 227 (340)
T ss_pred CchHhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccC--CCCCcHHHHHHHHHHHHHcCCCEEEE
Confidence 44577888888888889988877653 5532 1223455566655432 1111 123355666666667778887
Q ss_pred eCC---CCccccCCCHHHHHHHHHHHHhCC------CeEEEccccc
Q 014769 187 INP---GNPCGNVFTYHHLQEIAEMARKLR------VMVVADEVYG 223 (419)
Q Consensus 187 ~~p---~nptG~~~~~~~l~~i~~~~~~~~------~~li~De~~~ 223 (419)
-+. ||-+.. .++|++|.+++++.. ++++.|..-+
T Consensus 228 DTAGRLhnk~nL---M~EL~KI~rV~~k~~~~ap~e~llvlDAttG 270 (340)
T COG0552 228 DTAGRLHNKKNL---MDELKKIVRVIKKDDPDAPHEILLVLDATTG 270 (340)
T ss_pred eCcccccCchhH---HHHHHHHHHHhccccCCCCceEEEEEEcccC
Confidence 765 554433 357999999998875 5666687654
No 477
>PF10609 ParA: ParA/MinD ATPase like; InterPro: IPR019591 This entry represents ATPases involved in plasmid partitioning []. It also contains cytosolic Fe-S cluster assembling factors, NBP35 and CFD1 which are required for biogenesis and export of both ribosomal subunits probably through assembling the ISCs in RLI1, a protein which performs rRNA processing and ribosome export [, , ].; PDB: 2PH1_A 3KB1_B.
Probab=27.64 E-value=2.3e+02 Score=20.12 Aligned_cols=33 Identities=24% Similarity=0.441 Sum_probs=23.3
Q ss_pred CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
...+++++.|+. ++..+.++-.++|++.++.++
T Consensus 25 ~~g~ivVTTPq~-----la~~dv~r~~~~~~~~~vpil 57 (81)
T PF10609_consen 25 IDGAIVVTTPQE-----LALADVRRAIDMFRKLNVPIL 57 (81)
T ss_dssp -SEEEEEE-CCC-------HHHHHHHHHHHHCTT-EEE
T ss_pred CCeEEEEeCCHH-----HHHHHHHHHHHHHHhcCCCcE
Confidence 456888888876 677889999999999988654
No 478
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=27.44 E-value=1.4e+02 Score=29.11 Aligned_cols=78 Identities=13% Similarity=0.085 Sum_probs=43.8
Q ss_pred CCCcEEEcccHHHH---------------HHHHHHHhcCCCCeEEeeCCCCCCcHH-----HHhhcCCEEEEEeccCCCC
Q 014769 106 SADDVYVTLGCKQA---------------VEVILSVLARPGANVLLPRPGWPYYEG-----IAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 106 ~~~~i~~t~g~~~a---------------l~~~~~~l~~~gd~vlv~~p~~~~~~~-----~~~~~g~~~~~~~~~~~~~ 165 (419)
++-+|.+|+|+|.+ +....++=.+..+++++++|-|+.+.. .+-..|...+. |..
T Consensus 235 d~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vf-p~~---- 309 (596)
T KOG1177|consen 235 DAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVF-PAP---- 309 (596)
T ss_pred CceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEe-eCC----
Confidence 45588999998865 111111112234589999999986431 12233544433 321
Q ss_pred cccChHHHHHhhcCCccEEEEeCC
Q 014769 166 WEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
.+++.+..+++.......++.+|
T Consensus 310 -~f~~k~alqai~~ekcT~l~gtP 332 (596)
T KOG1177|consen 310 -SFDPKDALQAISNEKCTTLYGTP 332 (596)
T ss_pred -CCChHHHHHHHHhhceEEEecCh
Confidence 35666667777655555556555
No 479
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=27.41 E-value=2.6e+02 Score=23.76 Aligned_cols=123 Identities=12% Similarity=0.158 Sum_probs=59.4
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC--CeEEeeCCCCCCcHHHH---hh-cCCEEEEEe
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG--ANVLLPRPGWPYYEGIA---QR-KQVEVRHFD 159 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g--d~vlv~~p~~~~~~~~~---~~-~g~~~~~~~ 159 (419)
+.+..+.+.+++......++++++|++..=++.+..++..++..|. +.|+..+...+...... .. ...++....
T Consensus 83 i~~s~~~l~~li~~~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~~~~~~~~~~~~~pi~~~h 162 (216)
T PF02230_consen 83 IEESAERLDELIDEEVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPESELEDRPEALAKTPILIIH 162 (216)
T ss_dssp HHHHHHHHHHHHHHHHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGCCCHCCHCCCCTS-EEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccccccccccccCCCcEEEEe
Confidence 3344445555554422224788999998888888777777776543 67776665544321111 11 123343333
Q ss_pred ccCCCCcccChHHH---HHhhcCCc-cEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 160 LLPERNWEVDLDAV---EALADKNT-AAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 160 ~~~~~~~~~~~~~l---~~~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
-. .+.-+..+.. .+.++... ..-+..-|+ .|-.++.++++.+.++.+++
T Consensus 163 G~--~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g--~gH~i~~~~~~~~~~~l~~~ 215 (216)
T PF02230_consen 163 GD--EDPVVPFEWAEKTAEFLKAAGANVEFHEYPG--GGHEISPEELRDLREFLEKH 215 (216)
T ss_dssp ET--T-SSSTHHHHHHHHHHHHCTT-GEEEEEETT---SSS--HHHHHHHHHHHHHH
T ss_pred cC--CCCcccHHHHHHHHHHHHhcCCCEEEEEcCC--CCCCCCHHHHHHHHHHHhhh
Confidence 22 2223444332 33343322 232333331 67778888999998887753
No 480
>COG0826 Collagenase and related proteases [Posttranslational modification, protein turnover, chaperones]
Probab=26.88 E-value=1.9e+02 Score=27.02 Aligned_cols=46 Identities=20% Similarity=0.185 Sum_probs=25.3
Q ss_pred ChHHHHHhhcCCccEEEEeCC-CCccccC--CCHHHHHHHHHHHHhCCC
Q 014769 169 DLDAVEALADKNTAAMVIINP-GNPCGNV--FTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p-~nptG~~--~~~~~l~~i~~~~~~~~~ 214 (419)
+++.+..++.....+|++-.+ -|-.+.. ++.+++++++++|+++|.
T Consensus 15 ~l~~l~~ai~~GADaVY~G~~~~~~R~~a~nfs~~~l~e~i~~ah~~gk 63 (347)
T COG0826 15 NLEDLKAAIAAGADAVYIGEKEFGLRRRALNFSVEDLAEAVELAHSAGK 63 (347)
T ss_pred CHHHHHHHHHcCCCEEEeCCcccccccccccCCHHHHHHHHHHHHHcCC
Confidence 455566655555555655544 2222222 566666666666666655
No 481
>PRK04210 phosphoenolpyruvate carboxykinase; Provisional
Probab=26.85 E-value=6.8e+02 Score=25.34 Aligned_cols=50 Identities=14% Similarity=0.125 Sum_probs=40.3
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG 140 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~ 140 (419)
.+++++.|++... -+.|+.|+++.|+.+-...+...+.+.|..+-+-.+.
T Consensus 10 n~~l~~wv~e~~~-----l~~Pd~v~~cdGS~ee~~~l~~~~v~~G~~~~L~~~k 59 (601)
T PRK04210 10 NPKLLEWVAEVAE-----LTQPDRVVWCDGSEEEYDRLRDQAVEAGTEIKLNPEK 59 (601)
T ss_pred CHHHHHHHHHHHH-----hhCCCEEEEeCCCHHHHHHHHHHHHHcCCEeeccCCC
Confidence 4678888888875 3789999999999999999999888888766654433
No 482
>PF04237 YjbR: YjbR; InterPro: IPR007351 This is a family of uncharacterised proteins.; PDB: 3H9X_D 2KFP_A 2FKI_A 2A1V_A.
Probab=26.83 E-value=2.4e+02 Score=20.13 Aligned_cols=43 Identities=14% Similarity=0.196 Sum_probs=27.7
Q ss_pred HHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHH
Q 014769 364 IEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGR 407 (419)
Q Consensus 364 ~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~ 407 (419)
.+....|.+.+ -.+.|+..++..+|+.+.+ ..+.++|.++|+.
T Consensus 43 ~e~~~~l~~~~-~~~~p~~h~~k~~Wv~v~l~~~v~~~~l~~li~~ 87 (92)
T PF04237_consen 43 PEEQEALREQY-DGFFPAYHMNKKHWVSVRLDGDVDDEELRELIDE 87 (92)
T ss_dssp HHHHHHHHHSS-TTEEE-TSS-TTTEEEEETTSSS-HHHHHHHHHH
T ss_pred HHHHHHHHhhC-CCEEeCCccCCCcEEEEEeCCCCCHHHHHHHHHH
Confidence 34445665664 3345777888889999999 3578888888764
No 483
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=26.75 E-value=3.9e+02 Score=22.53 Aligned_cols=99 Identities=17% Similarity=0.264 Sum_probs=58.4
Q ss_pred EEEcccHHHHHHHHHHHhcCCCCeEE---eeCCCC-C----------CcHHHHhhcCCEEEEEeccCCCCcccChHHHHH
Q 014769 110 VYVTLGCKQAVEVILSVLARPGANVL---LPRPGW-P----------YYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA 175 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~vl---v~~p~~-~----------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (419)
++..+||..+..++..+.. .|..|. +..|.. . .....++..|++...+.++.... . -.+.+..
T Consensus 3 ~v~~SGGkDS~~al~~a~~-~G~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgipl~~i~~~~~~e-~-~~~~l~~ 79 (194)
T cd01994 3 VALISGGKDSCYALYRALE-EGHEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGIPLIRIEISGEEE-D-EVEDLKE 79 (194)
T ss_pred EEEecCCHHHHHHHHHHHH-cCCEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCCcEEEEeCCCCch-H-HHHHHHH
Confidence 4567888888888777765 454332 222221 1 12356677888887776533111 1 1233333
Q ss_pred hhcC----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 176 LADK----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 176 ~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.+++ ....++ +|.+.+......+-++|.+.|+..+.
T Consensus 80 ~l~~~~~~g~~~vv-------~G~i~sd~~~~~~e~~~~~~gl~~~~ 119 (194)
T cd01994 80 LLRKLKEEGVDAVV-------FGAILSEYQRTRVERVCERLGLEPLA 119 (194)
T ss_pred HHHHHHHcCCCEEE-------ECccccHHHHHHHHHHHHHcCCEEEe
Confidence 3322 122333 78888988899999999999886553
No 484
>TIGR02104 pulA_typeI pullulanase, type I. Pullulan is an unusual, industrially important polysaccharide in which short alpha-1,4 chains (maltotriose) are connected in alpha-1,6 linkages. Enzymes that cleave alpha-1,6 linkages in pullulan and release maltotriose are called pullulanases although pullulan itself may not be the natural substrate. This family consists of pullulanases related to the subfamilies described in TIGR02102 and TIGR02103 but having a different domain architecture with shorter sequences. Members are called type I pullulanases.
Probab=26.62 E-value=74 Score=32.45 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
.++++++++.|+++|+-||.|-+|.+..
T Consensus 228 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 255 (605)
T TIGR02104 228 IRELKQMIQALHENGIRVIMDVVYNHTY 255 (605)
T ss_pred HHHHHHHHHHHHHCCCEEEEEEEcCCcc
Confidence 5789999999999999999999997753
No 485
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=26.57 E-value=2.6e+02 Score=25.32 Aligned_cols=47 Identities=19% Similarity=0.082 Sum_probs=27.2
Q ss_pred CcccChHHHHHhhcC----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 165 NWEVDLDAVEALADK----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 165 ~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
+..+|.+.+++.++. ....++ +..++--+..++.++++++++.+.+.
T Consensus 15 dg~iD~~~l~~l~~~l~~~Gv~gi~-v~GstGE~~~Ls~eEr~~l~~~~~~~ 65 (289)
T cd00951 15 DGSFDEDAYRAHVEWLLSYGAAALF-AAGGTGEFFSLTPDEYAQVVRAAVEE 65 (289)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEE-ECcCCcCcccCCHHHHHHHHHHHHHH
Confidence 346777777665432 333333 33344445567778887777766553
No 486
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=26.45 E-value=5.1e+02 Score=23.80 Aligned_cols=115 Identities=18% Similarity=0.151 Sum_probs=58.3
Q ss_pred HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC--CeEEee--CCCCCCc--HHHHhhcCCEEEEEeccC
Q 014769 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG--ANVLLP--RPGWPYY--EGIAQRKQVEVRHFDLLP 162 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g--d~vlv~--~p~~~~~--~~~~~~~g~~~~~~~~~~ 162 (419)
.++.|+++-.. .+....+++|.|-+.....++....+.| -+|++. .|...+. ...+...|+++..++-
T Consensus 106 ~~~~I~~~a~~----~i~~g~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~~a~~L~~~GI~vtlI~D-- 179 (310)
T PRK08535 106 AVEKIGEIGAK----RIRDGDVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHITAKELAEYGIPVTLIVD-- 179 (310)
T ss_pred HHHHHHHHHHH----HcCCCCEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHHHHHHHHHCCCCEEEEeh--
Confidence 34444444433 2345567888776655555555554333 345554 3444442 2334556887776641
Q ss_pred CCCcccChHHHHHhhcCCccEEEEe-CCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 163 ERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 163 ~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
..+-..+. +...|++- .--...|-++++---..++-.|+.+++.+++
T Consensus 180 --------sav~~~m~-~vd~VivGAd~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 180 --------SAVRYFMK-DVDKVVVGADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred --------hHHHHHHH-hCCEEEECccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 12222232 23344332 1122344444444445677778888887665
No 487
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=26.43 E-value=3.1e+02 Score=21.75 Aligned_cols=94 Identities=15% Similarity=0.123 Sum_probs=46.7
Q ss_pred EEEcccHHHHHHHHHHHhcCCCC-eEEeeCCC--CCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----
Q 014769 110 VYVTLGCKQAVEVILSVLARPGA-NVLLPRPG--WPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd-~vlv~~p~--~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (419)
++||.+++..=..+.+.+.+.|+ .|++.... ..... ..+...+.++..+.+|.. +.+.++..++.
T Consensus 3 ~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 77 (167)
T PF00106_consen 3 VLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLS-----DPESIRALIEEVIKR 77 (167)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETT-----SHHHHHHHHHHHHHH
T ss_pred EEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccc-----ccccccccccccccc
Confidence 56666666655566666666665 44444443 22222 223445677788776532 44444443321
Q ss_pred --CccEEEEeCCCCcccc--CCCHHHHHHHHHH
Q 014769 180 --NTAAMVIINPGNPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 --~~~~v~i~~p~nptG~--~~~~~~l~~i~~~ 208 (419)
.-..++.+....+.+. -++.+++++..+.
T Consensus 78 ~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 78 FGPLDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp HSSESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccchhhhhcccc
Confidence 2233444433333333 2355666666553
No 488
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=26.15 E-value=3.1e+02 Score=24.22 Aligned_cols=93 Identities=15% Similarity=0.199 Sum_probs=54.7
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc-ChHHHHHhhcCCccEEEE
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV-DLDAVEALADKNTAAMVI 186 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~v~i 186 (419)
..|++-.|++++-.++-.. .+.|-.+++..-+-++. ....+..+. ..++ +.+.+...+.++...+ +
T Consensus 3 ~~IlvlgGT~egr~la~~L-~~~g~~v~~Svat~~g~---~~~~~~~v~--------~G~l~~~~~l~~~l~~~~i~~-V 69 (248)
T PRK08057 3 PRILLLGGTSEARALARAL-AAAGVDIVLSLAGRTGG---PADLPGPVR--------VGGFGGAEGLAAYLREEGIDL-V 69 (248)
T ss_pred ceEEEEechHHHHHHHHHH-HhCCCeEEEEEccCCCC---cccCCceEE--------ECCCCCHHHHHHHHHHCCCCE-E
Confidence 3688999999998776544 34566666544333222 222232222 1246 8888888887543333 3
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
+..+.|.-..++ +-+.+.|++.|+..+
T Consensus 70 IDATHPfA~~is----~~a~~ac~~~~ipyi 96 (248)
T PRK08057 70 IDATHPYAAQIS----ANAAAACRALGIPYL 96 (248)
T ss_pred EECCCccHHHHH----HHHHHHHHHhCCcEE
Confidence 344455544444 667788888888655
No 489
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=26.04 E-value=3.5e+02 Score=24.43 Aligned_cols=36 Identities=14% Similarity=0.224 Sum_probs=21.6
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
.+.++...|. .||..++.+.+++|.+ -.++.-+=|.
T Consensus 128 ~pv~lYn~P~-~~g~~l~~~~~~~L~~---~p~v~giK~s 163 (292)
T PRK03170 128 LPIILYNVPG-RTGVDILPETVARLAE---HPNIVGIKEA 163 (292)
T ss_pred CCEEEEECcc-ccCCCCCHHHHHHHHc---CCCEEEEEEC
Confidence 4556666665 3688888666666642 2355555554
No 490
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=25.77 E-value=76 Score=31.24 Aligned_cols=29 Identities=24% Similarity=0.220 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||+|-|.-+..
T Consensus 79 t~~dl~~Li~~~H~~Gi~vi~D~V~NH~~ 107 (479)
T PRK09441 79 TKEELLNAIDALHENGIKVYADVVLNHKA 107 (479)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 57889999999999999999999987754
No 491
>TIGR02012 tigrfam_recA protein RecA. This model describes orthologs of the recA protein. RecA promotes hybridization of homolgous regions of DNA. A segment of ssDNA can be hybridized to another ssDNA region, or to a dsDNA region. ATP is hydrolyzed in the process. Part of the SOS respones, it is regulated by LexA via autocatalytic cleavage.
Probab=25.75 E-value=2.2e+02 Score=26.31 Aligned_cols=20 Identities=25% Similarity=0.376 Sum_probs=14.4
Q ss_pred HHHHHHhcCeEeecCCCCCC
Q 014769 367 ALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 367 ~~~ll~~~gv~v~~g~~~~~ 386 (419)
+..+..+.||...+|++|..
T Consensus 270 ~~~~a~~~g~i~k~g~w~~~ 289 (321)
T TIGR02012 270 IIDLAVELDIIKKAGSWYSY 289 (321)
T ss_pred HHHHHHhCCcEEcccCEEEE
Confidence 34555778999889876654
No 492
>PF08672 APC2: Anaphase promoting complex (APC) subunit 2; InterPro: IPR014786 The anaphase-promoting complex (APC) or cyclosome is a multi-subunit E3 protein ubiquitin ligase that regulates important events in mitosis such as the initiation of anaphase and exit from telophase. The APC, in conjunction with other enzymes, assembles multi-ubiquitin chains on a variety of regulatory proteins, thereby targeting them for proteolysis by the 26S proteasome. Anaphase is initiated when the APC triggers the destruction of securin, thereby allowing the protease, separase, to disrupt sister-chromatid cohesion. Securin ubiquitination by the APC is inhibited by cyclin-dependent kinase 1 (Cdk1)-dependent phosphorylation []. Forkhead Box M1 (FoxM1), which is a transcription factor that is over-expressed in many cancers, is degraded in late mitosis and early G1 phase by the APC/cyclosome (APC/C) E3 ubiquitin ligase []. The APC/C targets mitotic cyclins for destruction in mitosis and G1 phase and is then inactivated at S phase. It thereby generates alternating states of high and low cyclin-Cdk activity, which is required for the alternation of mitosis and DNA replication []. The APC/C is composed of at least 13 subunits that stay tightly associated throughout the cell cycle: APC1, APC2, APC4, APC5, APC9, APC11, CDC16, CDC23, CDC26, CDC27, DOC1, MND2 and SWM1[], []. In fission yeast the 13 subunits are known as: Apc1, Apc2, Nuc2, Apc4, Apc5, Cut9, Apc8, Apc10, Apc11, Hcn1, Apc13, Apc14 and Apc15 []. This entry represents a C-terminal domain found in APC subunit 2. ; PDB: 1LDD_A.
Probab=25.74 E-value=97 Score=20.47 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=21.3
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
|..|++...+.+++++..+-..+.+.+.+.+..|
T Consensus 25 ~~~~~~~~~s~~eL~~fL~~lv~e~~L~~~~G~Y 58 (60)
T PF08672_consen 25 PKDPGGYDISLEELQEFLDRLVEEGKLECSGGSY 58 (60)
T ss_dssp -GGG--TT--HHHHHHHHHHHHHTTSEE--TTEE
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHCCcEEecCCEE
Confidence 4556778889999999988877778777777666
No 493
>PRK00077 eno enolase; Provisional
Probab=25.64 E-value=2.2e+02 Score=27.56 Aligned_cols=85 Identities=11% Similarity=0.068 Sum_probs=51.4
Q ss_pred hcCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769 127 LARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 127 l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 202 (419)
+.++-+-+++++|.... +..+.+..|-. +++..++.+..+++.+.+.++.+..-++..-++.-.|.. +.
T Consensus 273 l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~---ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik~~~~GGit----ea 345 (425)
T PRK00077 273 LVDKYPIVSIEDGLDENDWEGWKLLTEKLGDK---VQLVGDDLFVTNTKRLKKGIEKGAANSILIKVNQIGTLT----ET 345 (425)
T ss_pred HHhhCCcEEEEcCCCCccHHHHHHHHHhcCCC---CeEEcCCCccCCHHHHHHHHHhCCCCEEEeCccccCCHH----HH
Confidence 33445678899998763 33333333211 222222223346888888887665556666666544332 47
Q ss_pred HHHHHHHHhCCCeEEE
Q 014769 203 QEIAEMARKLRVMVVA 218 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~ 218 (419)
.+++++|+.+|+.+++
T Consensus 346 ~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 346 LDAIELAKRAGYTAVV 361 (425)
T ss_pred HHHHHHHHHcCCeEEE
Confidence 8999999999986553
No 494
>PLN02447 1,4-alpha-glucan-branching enzyme
Probab=25.27 E-value=1e+02 Score=32.18 Aligned_cols=30 Identities=27% Similarity=0.252 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
-+.++++++++.|+++|+-||.|-++.++.
T Consensus 297 Gtp~dlk~LVd~aH~~GI~VilDvV~nH~~ 326 (758)
T PLN02447 297 GTPEDLKYLIDKAHSLGLRVLMDVVHSHAS 326 (758)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 467899999999999999999999998764
No 495
>PTZ00081 enolase; Provisional
Probab=25.21 E-value=2.8e+02 Score=27.02 Aligned_cols=96 Identities=14% Similarity=0.109 Sum_probs=59.5
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCC
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 190 (419)
++.+.+......+. +-+-+++++|.... +..+.+..|-.+ ++..++.+..+++.+.+.+..+..-++..-++
T Consensus 282 s~~eli~~~~~~l~-~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i---~IvgDE~~~tn~~~l~~~I~~~aad~i~iKvn 357 (439)
T PTZ00081 282 TGEELVELYLDLVK-KYPIVSIEDPFDQDDWEAYAKLTAAIGQKV---QIVGDDLLVTNPTRIKKAIEKKACNALLLKVN 357 (439)
T ss_pred CHHHHHHHHHHHHh-cCCcEEEEcCCCcccHHHHHHHHHhhCCCc---eEEcCCcccCCHHHHHHHHHhCCCCEEEeccc
Confidence 44555555555553 33567889998653 444444443232 22222233456888988888766666666666
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.-.|. .+..+++++|+++++.+++
T Consensus 358 qiGGI----Te~l~~a~lA~~~Gi~~ii 381 (439)
T PTZ00081 358 QIGTV----TEAIEAAKLAQKNGWGVMV 381 (439)
T ss_pred cccCH----HHHHHHHHHHHHcCCcEEE
Confidence 53333 3478999999999987776
No 496
>PF15366 DUF4597: Domain of unknown function (DUF4597)
Probab=25.13 E-value=38 Score=21.60 Aligned_cols=16 Identities=31% Similarity=0.665 Sum_probs=12.6
Q ss_pred EEeCCCCccccCCCHH
Q 014769 185 VIINPGNPCGNVFTYH 200 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~ 200 (419)
+|+.|-.|||..+|.+
T Consensus 25 IIiTPPTPTg~~lpRD 40 (62)
T PF15366_consen 25 IIITPPTPTGMMLPRD 40 (62)
T ss_pred eEecCCCCCceecccc
Confidence 5677888999999843
No 497
>PRK09354 recA recombinase A; Provisional
Probab=25.09 E-value=3.3e+02 Score=25.54 Aligned_cols=28 Identities=11% Similarity=0.154 Sum_probs=18.1
Q ss_pred cCCCCeEEeeCCCCCCcHHHHhhcCCEE
Q 014769 128 ARPGANVLLPRPGWPYYEGIAQRKQVEV 155 (419)
Q Consensus 128 ~~~gd~vlv~~p~~~~~~~~~~~~g~~~ 155 (419)
...|..++..+..+......++..|.++
T Consensus 85 ~~~G~~~~yId~E~s~~~~~a~~lGvdl 112 (349)
T PRK09354 85 QKAGGTAAFIDAEHALDPVYAKKLGVDI 112 (349)
T ss_pred HHcCCcEEEECCccchHHHHHHHcCCCH
Confidence 3457777777766665556677777653
No 498
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=24.96 E-value=2.1e+02 Score=27.53 Aligned_cols=94 Identities=11% Similarity=0.109 Sum_probs=56.4
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 192 (419)
.+++......+ ++-+-+++++|.... +..+.+..|..+ ++-.++.+..+++.+.+.+..+..-++..-|+.-
T Consensus 264 ~eai~~~~~l~-e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~i---pi~gdE~~~~~~~~~~~~i~~~a~d~v~ik~~~i 339 (408)
T cd03313 264 EELIDYYKELV-KKYPIVSIEDPFDEDDWEGWAKLTAKLGDKI---QIVGDDLFVTNPERLKKGIEKKAANALLIKVNQI 339 (408)
T ss_pred HHHHHHHHHHH-HhCCcEEEEeCCCCcCHHHHHHHHHhcCCCC---eEEcCCcccCCHHHHHHHHHhCCCCEEEEccccc
Confidence 44544444333 334677899998753 333444432222 2212222334788888888766655666666664
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 193 CGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.|. .+..+++++|+++|+.+++
T Consensus 340 GGi----te~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 340 GTL----TETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred CCH----HHHHHHHHHHHHcCCeEEc
Confidence 443 3478999999999987763
No 499
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=24.80 E-value=6.3e+02 Score=24.29 Aligned_cols=33 Identities=24% Similarity=0.218 Sum_probs=22.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
....+++|.++...=..+...+.+.|.+|++..
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~ 209 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALT 209 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 345677776666666666677777887777653
No 500
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=24.73 E-value=1.8e+02 Score=27.69 Aligned_cols=126 Identities=17% Similarity=0.185 Sum_probs=66.0
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEE-cccHHHHHHHHHHHhcCC-CCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYV-TLGCKQAVEVILSVLARP-GANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-t~g~~~al~~~~~~l~~~-gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
-|.......|+.+= ..-.++ ..|-.++=..+...+... .+.-++..++.+..... +........+.+|
T Consensus 51 GGAaNVa~NiasLG---------a~a~l~GvvG~Deag~~L~~~l~~~~i~~~l~~~~~r~T~~K~-Rv~s~nQQllRvD 120 (467)
T COG2870 51 GGAANVAKNIASLG---------ANAYLVGVVGKDEAGKALIELLKANGIDSDLLRDKNRPTIVKL-RVLSRNQQLLRLD 120 (467)
T ss_pred ccHHHHHHHHHHcC---------CCEEEEEeeccchhHHHHHHHHHhcCcccceEeecCCCceeee-eeecccceEEEec
Confidence 35566667777642 222222 344444444444444332 24445556655543211 1122233344455
Q ss_pred CCCCcc-cChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769 162 PERNWE-VDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (419)
Q Consensus 162 ~~~~~~-~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 224 (419)
.++.+. .+...|.+.+.. +..+++++.-. -|...+ .+.++++|++.|+++++|-=-.+
T Consensus 121 ~Ee~~~~~~~~~ll~~~~~~l~~~~~vVLSDY~--KG~L~~---~q~~I~~ar~~~~pVLvDPKg~D 182 (467)
T COG2870 121 FEEKFPIEDENKLLEKIKNALKSFDALVLSDYA--KGVLTN---VQKMIDLAREAGIPVLVDPKGKD 182 (467)
T ss_pred ccccCcchhHHHHHHHHHHHhhcCCEEEEeccc--cccchh---HHHHHHHHHHcCCcEEECCCCcc
Confidence 444332 233344443332 45677776543 466555 89999999999999999964433
Done!