Query 014769
Match_columns 419
No_of_seqs 191 out of 2311
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 17:30:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dyd_A Tyrosine aminotransfera 100.0 6.3E-55 2.1E-59 419.5 39.2 406 6-417 21-426 (427)
2 1b5p_A Protein (aspartate amin 100.0 2.3E-51 7.9E-56 389.6 40.5 377 13-413 4-383 (385)
3 1bw0_A TAT, protein (tyrosine 100.0 4.7E-51 1.6E-55 391.6 41.7 403 8-417 3-415 (416)
4 3aow_A Putative uncharacterize 100.0 4.6E-50 1.6E-54 387.3 39.0 383 6-417 47-447 (448)
5 1j32_A Aspartate aminotransfer 100.0 4.5E-49 1.5E-53 374.4 40.2 381 14-415 4-387 (388)
6 3h14_A Aminotransferase, class 100.0 3.5E-49 1.2E-53 375.6 38.7 374 17-418 8-385 (391)
7 3fvs_A Kynurenine--oxoglutarat 100.0 1.2E-49 4.2E-54 382.5 35.5 382 11-414 4-421 (422)
8 3tcm_A Alanine aminotransferas 100.0 5.3E-49 1.8E-53 384.7 38.4 388 25-418 43-497 (500)
9 3ele_A Amino transferase; RER0 100.0 1.2E-48 4.2E-53 372.7 38.4 379 14-416 5-397 (398)
10 2x5d_A Probable aminotransfera 100.0 2.4E-48 8.2E-53 372.3 39.3 380 18-416 15-399 (412)
11 3jtx_A Aminotransferase; NP_28 100.0 1.3E-48 4.6E-53 372.1 37.3 370 16-412 5-395 (396)
12 1gd9_A Aspartate aminotransfer 100.0 6.4E-48 2.2E-52 366.6 40.7 377 14-415 4-386 (389)
13 1o4s_A Aspartate aminotransfer 100.0 5.4E-48 1.8E-52 367.0 39.6 372 13-413 14-387 (389)
14 3ihj_A Alanine aminotransferas 100.0 1.1E-48 3.8E-53 381.8 35.7 386 25-418 43-496 (498)
15 3b46_A Aminotransferase BNA3; 100.0 4.4E-49 1.5E-53 380.9 32.5 356 40-410 55-442 (447)
16 3e2y_A Kynurenine-oxoglutarate 100.0 2.2E-48 7.5E-53 372.4 34.9 373 16-410 4-408 (410)
17 2o1b_A Aminotransferase, class 100.0 1.1E-48 3.8E-53 373.4 32.7 376 14-415 23-403 (404)
18 3nra_A Aspartate aminotransfer 100.0 3.1E-48 1.1E-52 370.9 35.7 357 43-416 40-406 (407)
19 1xi9_A Putative transaminase; 100.0 4.3E-48 1.5E-52 369.8 35.8 390 12-417 11-405 (406)
20 2r2n_A Kynurenine/alpha-aminoa 100.0 1.1E-47 3.7E-52 369.0 37.6 378 8-415 2-424 (425)
21 3k7y_A Aspartate aminotransfer 100.0 3.4E-48 1.2E-52 367.4 32.5 371 13-414 4-404 (405)
22 3fdb_A Beta C-S lyase, putativ 100.0 4.9E-48 1.7E-52 365.8 32.6 352 39-415 20-376 (377)
23 3qgu_A LL-diaminopimelate amin 100.0 2E-47 7E-52 369.9 36.9 383 13-417 39-442 (449)
24 1u08_A Hypothetical aminotrans 100.0 3.2E-47 1.1E-51 361.4 36.6 349 42-410 30-385 (386)
25 3dzz_A Putative pyridoxal 5'-p 100.0 3.8E-47 1.3E-51 361.4 36.6 357 40-416 25-390 (391)
26 2dou_A Probable N-succinyldiam 100.0 1.6E-47 5.5E-52 362.2 33.3 350 39-412 22-375 (376)
27 1c7n_A Cystalysin; transferase 100.0 4.3E-47 1.5E-51 362.1 36.4 357 42-418 31-396 (399)
28 2o0r_A RV0858C (N-succinyldiam 100.0 4.5E-47 1.5E-51 363.3 36.0 356 41-415 24-396 (411)
29 3kax_A Aminotransferase, class 100.0 7.1E-47 2.4E-51 358.6 36.1 353 40-412 22-382 (383)
30 2zc0_A Alanine glyoxylate tran 100.0 2.6E-46 8.8E-51 357.7 39.7 386 9-417 3-406 (407)
31 1yiz_A Kynurenine aminotransfe 100.0 4.3E-47 1.5E-51 365.6 33.8 359 41-413 36-427 (429)
32 3ezs_A Aminotransferase ASPB; 100.0 2.3E-47 7.7E-52 361.1 31.2 358 22-415 6-375 (376)
33 2z61_A Probable aspartate amin 100.0 4.1E-46 1.4E-50 351.7 39.4 363 14-413 3-369 (370)
34 3ei9_A LL-diaminopimelate amin 100.0 1.5E-46 5.2E-51 362.0 36.6 383 12-415 25-428 (432)
35 1vp4_A Aminotransferase, putat 100.0 4.6E-47 1.6E-51 364.8 32.5 378 14-419 22-422 (425)
36 4dq6_A Putative pyridoxal phos 100.0 5.3E-46 1.8E-50 353.6 37.5 351 41-412 31-390 (391)
37 1d2f_A MALY protein; aminotran 100.0 5.3E-46 1.8E-50 353.5 37.3 353 42-415 28-389 (390)
38 2gb3_A Aspartate aminotransfer 100.0 1.3E-45 4.5E-50 352.8 40.2 378 14-417 17-404 (409)
39 3rq1_A Aminotransferase class 100.0 2.2E-46 7.5E-51 359.4 32.7 385 9-417 5-417 (418)
40 3g0t_A Putative aminotransfera 100.0 6.3E-46 2.1E-50 358.3 34.3 371 20-414 23-436 (437)
41 3l8a_A METC, putative aminotra 100.0 4E-46 1.4E-50 357.7 32.2 353 41-413 60-420 (421)
42 2zyj_A Alpha-aminodipate amino 100.0 5.9E-46 2E-50 354.0 32.1 375 9-417 6-395 (397)
43 4f4e_A Aromatic-amino-acid ami 100.0 5.5E-46 1.9E-50 356.7 30.9 371 12-412 23-419 (420)
44 1v2d_A Glutamine aminotransfer 100.0 3.9E-45 1.3E-49 346.4 35.6 361 15-417 5-373 (381)
45 3t18_A Aminotransferase class 100.0 8.2E-46 2.8E-50 354.8 31.0 377 14-417 9-412 (413)
46 3piu_A 1-aminocyclopropane-1-c 100.0 6.5E-45 2.2E-49 350.9 35.6 361 41-416 37-433 (435)
47 3asa_A LL-diaminopimelate amin 100.0 3.1E-45 1.1E-49 349.3 32.1 381 14-418 4-396 (400)
48 3ffh_A Histidinol-phosphate am 100.0 2E-44 6.7E-49 339.3 36.8 333 40-411 30-362 (363)
49 2x5f_A Aspartate_tyrosine_phen 100.0 7.4E-46 2.5E-50 357.0 27.3 349 41-415 46-429 (430)
50 1iay_A ACC synthase 2, 1-amino 100.0 2E-44 6.9E-49 346.8 36.8 358 42-414 36-426 (428)
51 7aat_A Aspartate aminotransfer 100.0 2.8E-45 9.5E-50 349.8 30.5 375 14-412 4-400 (401)
52 3ly1_A Putative histidinol-pho 100.0 1.3E-44 4.3E-49 339.5 33.5 337 38-414 12-351 (354)
53 3get_A Histidinol-phosphate am 100.0 1.8E-44 6.2E-49 339.8 32.4 333 41-412 29-364 (365)
54 3fsl_A Aromatic-amino-acid ami 100.0 7.7E-45 2.6E-49 346.3 30.1 364 18-411 6-396 (397)
55 3euc_A Histidinol-phosphate am 100.0 1.1E-43 3.8E-48 334.7 36.1 333 40-413 28-366 (367)
56 3d6k_A Putative aminotransfera 100.0 1.5E-44 5E-49 346.9 27.7 348 43-417 33-420 (422)
57 3g7q_A Valine-pyruvate aminotr 100.0 2.3E-44 7.8E-49 345.3 28.6 374 21-418 13-416 (417)
58 3op7_A Aminotransferase class 100.0 6.4E-44 2.2E-48 337.3 31.2 327 67-418 47-374 (375)
59 1ajs_A Aspartate aminotransfer 100.0 2.9E-44 9.9E-49 344.0 28.9 374 16-415 8-411 (412)
60 3ppl_A Aspartate aminotransfer 100.0 1E-44 3.4E-49 348.7 25.5 351 41-418 32-423 (427)
61 3if2_A Aminotransferase; YP_26 100.0 1.2E-43 4.1E-48 343.0 32.8 379 19-419 11-444 (444)
62 4h51_A Aspartate aminotransfer 100.0 7.2E-44 2.5E-48 337.6 30.0 379 11-418 18-420 (420)
63 3meb_A Aspartate aminotransfer 100.0 7.8E-44 2.7E-48 344.0 30.6 376 13-416 24-445 (448)
64 2zy4_A L-aspartate beta-decarb 100.0 8.6E-44 2.9E-48 349.8 30.8 373 22-417 80-524 (546)
65 1fg7_A Histidinol phosphate am 100.0 2.7E-43 9.3E-48 330.4 32.6 323 42-411 29-354 (356)
66 1yaa_A Aspartate aminotransfer 100.0 3.3E-44 1.1E-48 343.6 26.9 373 17-415 8-411 (412)
67 1lc5_A COBD, L-threonine-O-3-p 100.0 6.9E-43 2.4E-47 328.9 34.4 336 40-415 22-360 (364)
68 3f6t_A Aspartate aminotransfer 100.0 1.8E-43 6.3E-48 347.5 30.8 358 43-417 104-527 (533)
69 3ftb_A Histidinol-phosphate am 100.0 2.1E-42 7.2E-47 325.2 35.2 334 40-413 24-359 (361)
70 3ez1_A Aminotransferase MOCR f 100.0 1E-43 3.4E-48 341.4 26.2 350 41-417 24-417 (423)
71 3b1d_A Betac-S lyase; HET: PLP 100.0 1.8E-47 6.3E-52 363.7 0.0 351 43-413 32-391 (392)
72 4eu1_A Mitochondrial aspartate 100.0 4.1E-43 1.4E-47 335.6 28.3 369 14-412 17-408 (409)
73 2q7w_A Aspartate aminotransfer 100.0 1.9E-43 6.4E-48 336.6 25.0 369 18-412 6-396 (396)
74 2ay1_A Aroat, aromatic amino a 100.0 1.3E-42 4.6E-47 330.5 25.1 366 17-411 5-392 (394)
75 3cq5_A Histidinol-phosphate am 100.0 7.7E-41 2.6E-45 315.5 36.1 332 44-414 32-367 (369)
76 3fkd_A L-threonine-O-3-phospha 100.0 8.1E-42 2.8E-46 319.9 28.6 327 40-415 13-342 (350)
77 3hdo_A Histidinol-phosphate am 100.0 6.2E-41 2.1E-45 315.1 34.3 331 40-416 24-356 (360)
78 3p1t_A Putative histidinol-pho 100.0 2.1E-40 7.1E-45 308.6 35.6 322 40-413 14-335 (337)
79 3bwn_A AT1G70560, L-tryptophan 100.0 1.2E-42 4.1E-47 329.8 19.3 331 40-415 20-387 (391)
80 2hox_A ALLIIN lyase 1; cystein 100.0 7.3E-42 2.5E-46 327.6 20.4 331 41-414 55-424 (427)
81 1uu1_A Histidinol-phosphate am 100.0 1.4E-39 5E-44 302.7 27.9 316 42-411 19-334 (335)
82 3a2b_A Serine palmitoyltransfe 100.0 5.7E-38 2E-42 298.9 31.6 337 41-416 42-393 (398)
83 1vjo_A Alanine--glyoxylate ami 100.0 4.7E-36 1.6E-40 285.2 28.1 318 59-412 44-392 (393)
84 1t3i_A Probable cysteine desul 100.0 4.6E-36 1.6E-40 287.7 27.7 336 41-417 26-415 (420)
85 2dr1_A PH1308 protein, 386AA l 100.0 2.3E-35 7.7E-40 279.7 29.7 322 59-416 30-380 (386)
86 1kmj_A Selenocysteine lyase; p 100.0 1.4E-35 4.6E-40 283.1 27.2 333 41-415 21-405 (406)
87 3tqx_A 2-amino-3-ketobutyrate 100.0 3.8E-35 1.3E-39 279.4 28.3 334 41-415 42-396 (399)
88 1eg5_A Aminotransferase; PLP-d 100.0 3.4E-35 1.2E-39 278.2 26.0 324 59-417 12-378 (384)
89 2huf_A Alanine glyoxylate amin 100.0 7.9E-35 2.7E-39 276.7 27.6 332 41-417 17-385 (393)
90 1bs0_A Protein (8-amino-7-oxon 100.0 6.4E-35 2.2E-39 276.5 26.7 329 41-411 38-383 (384)
91 1e5e_A MGL, methionine gamma-l 100.0 1.2E-33 4.2E-38 268.8 35.4 319 44-419 20-399 (404)
92 2w8t_A SPT, serine palmitoyltr 100.0 3.3E-34 1.1E-38 275.3 30.8 338 40-418 62-418 (427)
93 1elu_A L-cysteine/L-cystine C- 100.0 3.3E-35 1.1E-39 279.0 22.7 330 42-411 15-388 (390)
94 2bwn_A 5-aminolevulinate synth 100.0 1.7E-34 6E-39 275.1 26.6 335 41-415 45-400 (401)
95 2z9v_A Aspartate aminotransfer 100.0 3.5E-34 1.2E-38 272.2 28.2 321 59-416 19-372 (392)
96 2ch1_A 3-hydroxykynurenine tra 100.0 2.7E-34 9.3E-39 273.3 27.1 321 59-417 28-385 (396)
97 2e7j_A SEP-tRNA:Cys-tRNA synth 100.0 1.1E-35 3.8E-40 280.3 16.5 326 41-415 6-370 (371)
98 1fc4_A 2-amino-3-ketobutyrate 100.0 4.6E-34 1.6E-38 272.2 26.5 332 40-415 43-397 (401)
99 1iug_A Putative aspartate amin 100.0 1.2E-33 4.3E-38 264.3 25.5 318 58-416 10-349 (352)
100 3lvm_A Cysteine desulfurase; s 100.0 1.9E-33 6.6E-38 269.8 27.1 333 39-417 18-401 (423)
101 4eb5_A Probable cysteine desul 100.0 3.9E-33 1.3E-37 263.9 28.7 326 59-417 11-375 (382)
102 3kki_A CAI-1 autoinducer synth 100.0 9.4E-33 3.2E-37 263.8 31.4 332 40-415 57-404 (409)
103 3f9t_A TDC, L-tyrosine decarbo 100.0 1.1E-32 3.6E-37 262.2 31.1 320 59-413 41-396 (397)
104 3zrp_A Serine-pyruvate aminotr 100.0 2.9E-33 1E-37 264.9 26.6 319 58-416 11-364 (384)
105 3kgw_A Alanine-glyoxylate amin 100.0 2.7E-33 9.4E-38 266.0 26.3 323 58-418 32-391 (393)
106 3nnk_A Ureidoglycine-glyoxylat 100.0 5.7E-33 1.9E-37 265.5 28.4 332 41-416 11-391 (411)
107 1v72_A Aldolase; PLP-dependent 100.0 1E-33 3.6E-38 265.3 22.8 330 41-416 6-354 (356)
108 2yrr_A Aminotransferase, class 100.0 1.2E-33 4.2E-38 264.4 22.0 318 58-414 9-352 (353)
109 1sff_A 4-aminobutyrate aminotr 100.0 1.1E-33 3.7E-38 271.8 22.1 347 40-415 39-424 (426)
110 4hvk_A Probable cysteine desul 100.0 2.1E-32 7.3E-37 258.7 29.8 324 59-417 11-375 (382)
111 2eh6_A Acoat, acetylornithine 100.0 3E-33 1E-37 264.2 23.3 323 40-412 26-375 (375)
112 3isl_A Purine catabolism prote 100.0 2E-32 6.9E-37 262.1 28.8 331 42-416 10-391 (416)
113 1svv_A Threonine aldolase; str 100.0 7.3E-33 2.5E-37 259.8 25.2 332 41-415 12-358 (359)
114 3cai_A Possible aminotransfera 100.0 9.6E-33 3.3E-37 263.5 26.3 326 43-410 26-404 (406)
115 1m32_A 2-aminoethylphosphonate 100.0 9E-33 3.1E-37 259.8 25.3 330 43-414 4-364 (366)
116 2aeu_A Hypothetical protein MJ 100.0 5.6E-32 1.9E-36 254.8 29.0 331 41-417 26-373 (374)
117 4adb_A Succinylornithine trans 100.0 1.2E-32 4.2E-37 262.8 23.8 336 40-417 37-402 (406)
118 3f0h_A Aminotransferase; RER07 100.0 8.1E-32 2.8E-36 254.4 28.1 330 42-414 18-373 (376)
119 2dkj_A Serine hydroxymethyltra 100.0 4.9E-32 1.7E-36 258.7 26.8 348 23-414 9-387 (407)
120 3i4j_A Aminotransferase, class 100.0 4.8E-32 1.6E-36 260.6 25.2 356 40-416 27-429 (430)
121 2ord_A Acoat, acetylornithine 100.0 1.4E-32 4.7E-37 261.6 20.8 333 40-414 38-396 (397)
122 2eo5_A 419AA long hypothetical 100.0 1E-31 3.5E-36 257.3 26.5 340 40-415 40-418 (419)
123 1b9h_A AHBA synthase, protein 100.0 6.7E-31 2.3E-35 249.2 31.8 315 61-414 16-387 (388)
124 3ffr_A Phosphoserine aminotran 100.0 1.7E-31 5.8E-36 250.8 27.1 327 43-412 4-361 (362)
125 1jg8_A L-ALLO-threonine aldola 100.0 3.5E-32 1.2E-36 254.0 22.1 327 41-415 2-346 (347)
126 3ruy_A Ornithine aminotransfer 100.0 1.2E-31 4E-36 254.8 24.2 327 40-412 34-391 (392)
127 1s0a_A Adenosylmethionine-8-am 100.0 1.9E-31 6.6E-36 256.3 26.0 340 40-416 41-425 (429)
128 2ez2_A Beta-tyrosinase, tyrosi 100.0 4.7E-31 1.6E-35 255.6 27.9 343 41-416 32-432 (456)
129 1vef_A Acetylornithine/acetyl- 100.0 6.5E-32 2.2E-36 256.8 21.1 337 40-412 43-394 (395)
130 3vax_A Putative uncharacterize 100.0 8.2E-32 2.8E-36 256.5 21.6 337 41-414 18-399 (400)
131 3dxv_A Alpha-amino-epsilon-cap 100.0 3.2E-31 1.1E-35 255.5 25.8 349 40-416 41-426 (439)
132 2pb2_A Acetylornithine/succiny 100.0 3.7E-31 1.3E-35 253.3 25.4 336 40-416 55-419 (420)
133 4ffc_A 4-aminobutyrate aminotr 100.0 3.2E-31 1.1E-35 256.0 24.9 357 40-418 62-452 (453)
134 2oga_A Transaminase; PLP-depen 100.0 6.2E-31 2.1E-35 250.3 26.4 326 42-416 30-397 (399)
135 1zod_A DGD, 2,2-dialkylglycine 100.0 1.2E-31 4.1E-36 258.1 21.6 351 40-415 41-432 (433)
136 2po3_A 4-dehydrase; external a 100.0 1.7E-30 5.9E-35 249.2 29.6 336 38-415 10-386 (424)
137 2bkw_A Alanine-glyoxylate amin 100.0 1.4E-31 4.9E-36 253.4 21.6 329 42-414 4-383 (385)
138 3nx3_A Acoat, acetylornithine 100.0 1.3E-30 4.3E-35 247.9 27.5 335 40-414 34-394 (395)
139 3gju_A Putative aminotransfera 100.0 1.7E-30 5.9E-35 251.6 27.8 358 39-418 48-459 (460)
140 3mad_A Sphingosine-1-phosphate 100.0 4E-30 1.4E-34 252.5 30.4 312 79-417 130-471 (514)
141 3a9z_A Selenocysteine lyase; P 100.0 9.7E-31 3.3E-35 251.7 25.1 334 42-417 17-430 (432)
142 3n5m_A Adenosylmethionine-8-am 100.0 1.4E-30 4.8E-35 251.9 25.9 352 39-414 46-451 (452)
143 4a6r_A Omega transaminase; tra 100.0 1.9E-30 6.6E-35 251.2 26.6 353 39-416 47-450 (459)
144 1w23_A Phosphoserine aminotran 100.0 1.9E-31 6.4E-36 250.4 18.6 327 43-414 3-359 (360)
145 3l44_A Glutamate-1-semialdehyd 100.0 7.4E-31 2.5E-35 252.6 23.2 350 40-419 53-434 (434)
146 2rfv_A Methionine gamma-lyase; 100.0 1.4E-29 4.8E-34 240.8 31.0 317 46-410 24-395 (398)
147 1ax4_A Tryptophanase; tryptoph 100.0 3.8E-30 1.3E-34 250.0 27.5 347 41-415 33-441 (467)
148 2c0r_A PSAT, phosphoserine ami 100.0 4.6E-31 1.6E-35 248.0 20.3 325 43-415 4-361 (362)
149 3mc6_A Sphingosine-1-phosphate 100.0 1.2E-29 4E-34 248.4 30.9 331 59-417 75-439 (497)
150 2c81_A Glutamine-2-deoxy-scyll 100.0 4E-29 1.4E-33 239.3 32.1 329 59-419 13-418 (418)
151 3oks_A 4-aminobutyrate transam 100.0 2.3E-30 8E-35 249.9 23.0 353 40-414 59-450 (451)
152 1mdo_A ARNB aminotransferase; 100.0 2E-29 6.7E-34 239.5 28.9 325 43-417 9-388 (393)
153 1z7d_A Ornithine aminotransfer 100.0 5.4E-30 1.8E-34 246.0 25.0 335 40-418 63-432 (433)
154 1qz9_A Kynureninase; kynurenin 100.0 8.9E-30 3E-34 243.7 26.4 322 42-416 27-403 (416)
155 1rv3_A Serine hydroxymethyltra 100.0 8.9E-30 3E-34 247.5 26.4 346 42-414 44-430 (483)
156 3a8u_X Omega-amino acid--pyruv 100.0 6.2E-30 2.1E-34 247.2 24.6 346 40-415 48-447 (449)
157 2oat_A Ornithine aminotransfer 100.0 3.2E-29 1.1E-33 241.0 28.5 331 40-414 74-438 (439)
158 1ibj_A CBL, cystathionine beta 100.0 5E-30 1.7E-34 247.0 22.6 327 42-414 89-461 (464)
159 3dod_A Adenosylmethionine-8-am 100.0 8.3E-30 2.8E-34 246.1 24.1 350 39-417 41-445 (448)
160 3lws_A Aromatic amino acid bet 100.0 4.1E-30 1.4E-34 241.0 20.3 299 78-412 41-356 (357)
161 3tfu_A Adenosylmethionine-8-am 100.0 3.1E-30 1.1E-34 249.0 19.4 341 40-416 71-454 (457)
162 3pj0_A LMO0305 protein; struct 100.0 5.1E-30 1.8E-34 240.5 20.3 328 42-411 13-358 (359)
163 3uwc_A Nucleotide-sugar aminot 100.0 5.6E-29 1.9E-33 234.8 27.2 324 41-415 5-371 (374)
164 3n0l_A Serine hydroxymethyltra 100.0 6.6E-29 2.3E-33 237.7 27.6 337 43-415 26-389 (417)
165 3k28_A Glutamate-1-semialdehyd 100.0 8.9E-30 3E-34 244.6 21.2 343 39-416 50-428 (429)
166 3i5t_A Aminotransferase; pyrid 100.0 2.6E-29 8.9E-34 243.8 24.6 350 39-417 51-456 (476)
167 3ndn_A O-succinylhomoserine su 100.0 8.2E-29 2.8E-33 235.5 26.5 286 85-412 82-413 (414)
168 1wyu_B Glycine dehydrogenase s 100.0 1.1E-28 3.9E-33 239.5 27.4 333 43-414 67-440 (474)
169 2cy8_A D-phgat, D-phenylglycin 100.0 4.7E-29 1.6E-33 241.3 24.1 335 40-417 55-437 (453)
170 3hmu_A Aminotransferase, class 100.0 6.3E-29 2.1E-33 240.7 24.6 350 39-416 52-453 (472)
171 2dgk_A GAD-beta, GADB, glutama 100.0 7.7E-28 2.6E-32 232.6 31.2 368 22-417 22-436 (452)
172 2epj_A Glutamate-1-semialdehyd 100.0 5.2E-29 1.8E-33 239.7 21.6 337 40-416 54-432 (434)
173 2e7u_A Glutamate-1-semialdehyd 100.0 1.6E-28 5.4E-33 235.6 24.7 333 40-412 50-424 (424)
174 3fq8_A Glutamate-1-semialdehyd 100.0 1.4E-28 4.8E-33 236.2 24.1 339 39-414 49-426 (427)
175 2fnu_A Aminotransferase; prote 100.0 1E-27 3.4E-32 226.2 29.5 313 59-415 10-372 (375)
176 2vi8_A Serine hydroxymethyltra 100.0 6.7E-28 2.3E-32 229.8 27.8 333 41-415 23-387 (405)
177 1gc0_A Methionine gamma-lyase; 100.0 1.6E-27 5.3E-32 226.6 30.2 281 83-410 64-396 (398)
178 3e9k_A Kynureninase; kynurenin 100.0 8.7E-29 3E-33 240.2 21.6 295 85-416 112-462 (465)
179 1cs1_A CGS, protein (cystathio 100.0 2.4E-27 8.1E-32 224.5 30.5 284 84-416 52-384 (386)
180 2cjg_A L-lysine-epsilon aminot 100.0 6.8E-29 2.3E-33 239.5 19.9 338 40-415 52-448 (449)
181 3dr4_A Putative perosamine syn 100.0 4.9E-28 1.7E-32 229.7 25.3 324 41-412 21-390 (391)
182 2oqx_A Tryptophanase; lyase, p 100.0 4.9E-29 1.7E-33 242.2 18.6 351 41-416 31-443 (467)
183 3ecd_A Serine hydroxymethyltra 100.0 2.3E-27 8E-32 227.5 29.6 338 43-415 33-397 (425)
184 3frk_A QDTB; aminotransferase, 100.0 2.1E-28 7.2E-33 230.8 21.6 325 43-417 4-370 (373)
185 4e77_A Glutamate-1-semialdehyd 100.0 1.8E-28 6.3E-33 235.5 21.5 345 40-414 51-428 (429)
186 3h7f_A Serine hydroxymethyltra 100.0 8.6E-28 3E-32 231.7 25.8 337 43-415 46-414 (447)
187 2fyf_A PSAT, phosphoserine ami 100.0 7.3E-28 2.5E-32 229.1 23.7 327 41-414 38-397 (398)
188 3gbx_A Serine hydroxymethyltra 100.0 8.2E-28 2.8E-32 230.3 23.9 327 60-415 42-396 (420)
189 3hbx_A GAD 1, glutamate decarb 100.0 9E-27 3.1E-31 227.3 31.1 365 24-417 38-446 (502)
190 3ri6_A O-acetylhomoserine sulf 100.0 4.8E-27 1.6E-31 223.9 27.6 290 84-412 82-429 (430)
191 3qhx_A Cystathionine gamma-syn 100.0 5.5E-27 1.9E-31 222.1 27.8 284 84-412 66-391 (392)
192 1qgn_A Protein (cystathionine 100.0 7.2E-27 2.5E-31 223.2 28.2 284 85-414 115-444 (445)
193 3nyt_A Aminotransferase WBPE; 100.0 2E-27 6.9E-32 223.5 24.1 305 59-411 13-360 (367)
194 1pff_A Methionine gamma-lyase; 100.0 7.4E-27 2.5E-31 216.5 27.1 277 88-411 2-330 (331)
195 3acz_A Methionine gamma-lyase; 100.0 1.2E-26 4E-31 219.7 28.6 281 84-413 59-387 (389)
196 2cb1_A O-acetyl homoserine sul 100.0 3.7E-26 1.3E-30 218.0 32.0 309 57-410 31-411 (412)
197 2okj_A Glutamate decarboxylase 100.0 4.1E-26 1.4E-30 223.4 32.9 318 78-415 122-502 (504)
198 3cog_A Cystathionine gamma-lya 100.0 9.4E-27 3.2E-31 221.1 26.6 286 78-415 62-398 (403)
199 1o69_A Aminotransferase; struc 100.0 8.3E-26 2.8E-30 214.5 30.5 311 61-414 11-386 (394)
200 1n8p_A Cystathionine gamma-lya 100.0 8.6E-27 2.9E-31 220.7 23.5 283 84-411 55-391 (393)
201 2qma_A Diaminobutyrate-pyruvat 100.0 5.4E-26 1.8E-30 222.2 29.4 336 59-415 111-496 (497)
202 1js3_A DDC;, DOPA decarboxylas 100.0 2.7E-26 9.2E-31 223.8 27.2 335 60-418 86-477 (486)
203 3ke3_A Putative serine-pyruvat 99.9 5.5E-26 1.9E-30 214.5 26.5 299 88-416 35-377 (379)
204 3vp6_A Glutamate decarboxylase 99.9 6.6E-25 2.2E-29 214.5 33.5 333 62-415 110-505 (511)
205 2fq6_A Cystathionine beta-lyas 99.9 8.1E-26 2.8E-30 214.7 26.0 212 85-335 83-302 (415)
206 3ju7_A Putative PLP-dependent 99.9 1.7E-25 5.7E-30 210.6 26.6 315 56-414 10-374 (377)
207 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 1.7E-24 5.6E-29 208.4 30.6 311 60-413 41-434 (437)
208 3nmy_A Xometc, cystathionine g 99.9 5.1E-25 1.7E-29 208.5 25.8 283 85-413 68-397 (400)
209 2jis_A Cysteine sulfinic acid 99.9 6.2E-24 2.1E-28 208.3 33.9 333 61-414 121-514 (515)
210 4e1o_A HDC, histidine decarbox 99.9 1.1E-24 3.6E-29 211.7 27.3 332 61-417 92-480 (481)
211 2x3l_A ORN/Lys/Arg decarboxyla 99.9 2.1E-26 7.3E-31 221.4 14.8 290 81-415 54-353 (446)
212 2a7v_A Serine hydroxymethyltra 99.9 2E-24 6.9E-29 207.8 28.0 359 24-414 41-440 (490)
213 3k40_A Aromatic-L-amino-acid d 99.9 1.7E-24 5.9E-29 209.7 26.6 338 62-418 88-474 (475)
214 1wyu_A Glycine dehydrogenase ( 99.9 7.5E-24 2.6E-28 203.8 28.3 280 87-412 111-437 (438)
215 2z67_A O-phosphoseryl-tRNA(SEC 99.9 6.7E-25 2.3E-29 211.9 20.3 297 86-412 131-455 (456)
216 2yky_A Beta-transaminase; tran 99.9 8.7E-28 3E-32 230.0 0.0 339 38-416 96-461 (465)
217 1ohv_A 4-aminobutyrate aminotr 99.9 5.7E-25 1.9E-29 213.1 19.6 340 40-414 61-470 (472)
218 2ctz_A O-acetyl-L-homoserine s 99.9 2.9E-23 1E-27 198.3 30.2 290 85-412 59-420 (421)
219 3b8x_A WBDK, pyridoxamine 5-ph 99.9 9.2E-23 3.1E-27 193.3 31.5 307 59-408 12-389 (390)
220 1c4k_A Protein (ornithine deca 99.9 1.1E-22 3.9E-27 204.1 26.8 309 84-416 173-567 (730)
221 3jzl_A Putative cystathionine 99.9 9.3E-23 3.2E-27 192.7 23.5 270 62-374 32-338 (409)
222 3hvy_A Cystathionine beta-lyas 99.9 1.9E-22 6.6E-27 191.1 23.1 266 62-370 47-352 (427)
223 3i16_A Aluminum resistance pro 99.9 2.1E-22 7.3E-27 190.8 21.7 267 62-370 46-352 (427)
224 3ht4_A Aluminum resistance pro 99.9 3.1E-22 1.1E-26 190.7 22.5 255 89-372 66-343 (431)
225 2vyc_A Biodegradative arginine 99.9 1.5E-21 5E-26 197.9 28.7 308 86-415 207-605 (755)
226 3e77_A Phosphoserine aminotran 99.9 6.1E-22 2.1E-26 184.2 23.3 327 57-415 21-375 (377)
227 3qm2_A Phosphoserine aminotran 99.9 5.6E-22 1.9E-26 185.6 20.8 332 43-415 27-385 (386)
228 3m5u_A Phosphoserine aminotran 99.9 3.7E-21 1.3E-25 178.4 25.2 323 42-415 4-360 (361)
229 4ao9_A Beta-phenylalanine amin 99.9 1.3E-19 4.5E-24 172.2 24.1 336 39-417 84-448 (454)
230 3n75_A LDC, lysine decarboxyla 99.8 4.9E-19 1.7E-23 176.3 26.9 304 85-415 196-560 (715)
231 4e3q_A Pyruvate transaminase; 99.8 3E-18 1E-22 164.2 26.2 352 38-417 63-470 (473)
232 4atq_A 4-aminobutyrate transam 99.8 6.8E-18 2.3E-22 161.1 26.8 351 40-415 62-455 (456)
233 3hl2_A O-phosphoseryl-tRNA(SEC 99.8 1.2E-16 3.9E-21 148.2 23.8 305 94-418 123-464 (501)
234 4a0g_A Adenosylmethionine-8-am 99.8 5.6E-18 1.9E-22 172.9 14.6 346 43-415 381-828 (831)
235 3ou5_A Serine hydroxymethyltra 99.7 7.7E-16 2.6E-20 142.1 24.6 365 19-413 36-439 (490)
236 3bc8_A O-phosphoseryl-tRNA(SEC 99.7 2.5E-15 8.6E-20 141.3 21.7 316 85-418 95-446 (450)
237 3gh5_A HEX1, beta-hexosaminida 84.7 5 0.00017 38.4 9.8 114 101-218 124-274 (525)
238 1oft_A SULA, hypothetical prot 83.9 12 0.00042 29.3 10.1 102 109-215 48-154 (161)
239 1ofu_X SULA, hypothetical prot 82.2 8.4 0.00029 28.6 8.3 102 109-215 6-112 (119)
240 1jak_A Beta-N-acetylhexosamini 77.7 7.5 0.00026 37.1 8.4 111 104-218 103-249 (512)
241 2gjx_A Beta-hexosaminidase alp 73.7 9.7 0.00033 36.3 8.0 107 104-218 97-233 (507)
242 1now_A Beta-hexosaminidase bet 67.0 9.7 0.00033 36.3 6.4 106 104-218 103-238 (507)
243 3rcn_A Beta-N-acetylhexosamini 66.7 11 0.00037 36.3 6.7 117 101-218 80-242 (543)
244 2yvq_A Carbamoyl-phosphate syn 65.8 42 0.0014 25.6 9.3 104 109-219 26-131 (143)
245 1c7s_A Beta-N-acetylhexosamini 61.6 15 0.0005 37.4 6.8 115 104-218 265-418 (858)
246 4fgs_A Probable dehydrogenase 58.6 37 0.0013 29.3 8.1 99 106-209 28-134 (273)
247 3ozo_A N-acetylglucosaminidase 58.4 34 0.0012 33.1 8.4 100 109-217 142-273 (572)
248 3zu3_A Putative reductase YPO4 56.9 86 0.003 28.7 10.5 55 83-137 23-78 (405)
249 3tpc_A Short chain alcohol deh 52.2 78 0.0027 26.5 9.2 56 106-161 6-61 (257)
250 4dqx_A Probable oxidoreductase 50.7 76 0.0026 27.1 8.9 97 105-207 25-130 (277)
251 3rwb_A TPLDH, pyridoxal 4-dehy 50.5 64 0.0022 27.0 8.3 96 107-208 6-110 (247)
252 3m1a_A Putative dehydrogenase; 49.6 88 0.003 26.6 9.2 54 108-161 6-59 (281)
253 3rjz_A N-type ATP pyrophosphat 48.6 1.2E+02 0.0041 25.4 9.5 99 109-217 7-120 (237)
254 4hp8_A 2-deoxy-D-gluconate 3-d 48.5 62 0.0021 27.4 7.7 100 105-209 7-110 (247)
255 4gkb_A 3-oxoacyl-[acyl-carrier 48.1 1.1E+02 0.0039 25.8 9.4 100 104-208 4-112 (258)
256 4e6p_A Probable sorbitol dehyd 43.1 95 0.0032 26.0 8.3 97 106-207 7-111 (259)
257 3n74_A 3-ketoacyl-(acyl-carrie 42.9 93 0.0032 26.0 8.2 57 105-161 7-63 (261)
258 3grp_A 3-oxoacyl-(acyl carrier 42.9 85 0.0029 26.6 7.9 56 106-161 26-81 (266)
259 4eso_A Putative oxidoreductase 42.8 93 0.0032 26.1 8.1 98 106-208 7-112 (255)
260 3tzq_B Short-chain type dehydr 42.4 1.5E+02 0.0053 24.9 9.9 97 106-207 10-116 (271)
261 3gvc_A Oxidoreductase, probabl 42.3 80 0.0027 27.0 7.7 96 107-208 29-133 (277)
262 1bqc_A Protein (beta-mannanase 42.3 47 0.0016 28.9 6.3 23 198-220 63-85 (302)
263 3rd5_A Mypaa.01249.C; ssgcid, 41.7 47 0.0016 28.6 6.2 79 106-189 15-94 (291)
264 3qfe_A Putative dihydrodipicol 41.6 1.8E+02 0.0062 25.5 10.3 53 87-142 63-118 (318)
265 4g81_D Putative hexonate dehyd 40.6 1.1E+02 0.0036 26.0 8.0 99 105-208 7-116 (255)
266 3guy_A Short-chain dehydrogena 40.3 94 0.0032 25.4 7.7 94 109-208 3-102 (230)
267 4fn4_A Short chain dehydrogena 40.1 1.1E+02 0.0037 25.9 8.0 98 106-208 6-115 (254)
268 3ppi_A 3-hydroxyacyl-COA dehyd 39.9 74 0.0025 27.1 7.1 55 107-161 30-84 (281)
269 3daq_A DHDPS, dihydrodipicolin 39.5 1.2E+02 0.004 26.3 8.3 35 109-143 73-110 (292)
270 2o23_A HADH2 protein; HSD17B10 39.5 1.6E+02 0.0056 24.4 10.6 67 106-177 11-77 (265)
271 1yht_A DSPB; beta barrel, hydr 39.0 46 0.0016 30.1 5.7 71 145-218 39-113 (367)
272 3op4_A 3-oxoacyl-[acyl-carrier 38.6 1.2E+02 0.004 25.3 8.1 96 106-207 8-112 (248)
273 2v9d_A YAGE; dihydrodipicolini 37.4 2.2E+02 0.0075 25.3 9.9 54 87-143 83-139 (343)
274 3e2i_A Thymidine kinase; Zn-bi 37.4 80 0.0028 26.1 6.4 102 117-234 43-147 (219)
275 3h7a_A Short chain dehydrogena 36.8 1.8E+02 0.0062 24.1 10.0 97 106-207 6-112 (252)
276 3pxx_A Carveol dehydrogenase; 36.4 88 0.003 26.6 7.1 97 106-208 9-127 (287)
277 3l6e_A Oxidoreductase, short-c 36.3 1.2E+02 0.0041 25.0 7.7 95 109-208 5-107 (235)
278 3lkv_A Uncharacterized conserv 35.3 2.1E+02 0.0073 24.5 9.8 144 62-220 23-176 (302)
279 2epl_X N-acetyl-beta-D-glucosa 34.7 1.5E+02 0.0053 28.9 9.0 103 104-218 42-163 (627)
280 3lyl_A 3-oxoacyl-(acyl-carrier 34.7 1.9E+02 0.0065 23.7 8.8 95 107-207 5-111 (247)
281 2pnv_A Small conductance calci 34.5 70 0.0024 18.7 4.1 38 297-334 4-43 (43)
282 4gqr_A Pancreatic alpha-amylas 34.5 27 0.00093 32.8 3.7 30 197-226 74-103 (496)
283 3gaf_A 7-alpha-hydroxysteroid 34.5 1.3E+02 0.0045 25.1 7.8 98 105-207 10-117 (256)
284 1o5k_A DHDPS, dihydrodipicolin 34.1 2.2E+02 0.0077 24.7 9.3 54 87-143 64-120 (306)
285 3si9_A DHDPS, dihydrodipicolin 33.7 93 0.0032 27.4 6.7 54 87-143 74-130 (315)
286 2nu8_A Succinyl-COA ligase [AD 33.4 65 0.0022 27.9 5.6 48 169-222 77-124 (288)
287 3m5v_A DHDPS, dihydrodipicolin 32.9 2.4E+02 0.0083 24.4 9.6 55 87-143 59-116 (301)
288 2es9_A Putative cytoplasmic pr 32.2 4.6 0.00016 27.8 -1.6 80 63-144 11-97 (115)
289 2kfp_A Pspto_3016 protein; alp 31.8 61 0.0021 24.0 4.4 39 367-407 71-111 (125)
290 1hxh_A 3BETA/17BETA-hydroxyste 31.3 2.2E+02 0.0077 23.5 8.8 96 107-207 6-109 (253)
291 3ged_A Short-chain dehydrogena 31.3 1.5E+02 0.0053 24.8 7.5 94 109-208 4-105 (247)
292 4ibo_A Gluconate dehydrogenase 30.9 1.8E+02 0.0063 24.5 8.1 99 105-208 24-133 (271)
293 1hdc_A 3-alpha, 20 beta-hydrox 30.9 2E+02 0.0069 23.8 8.4 54 108-161 6-59 (254)
294 3flu_A DHDPS, dihydrodipicolin 30.7 1.4E+02 0.0048 25.9 7.3 54 87-143 59-115 (297)
295 3f9i_A 3-oxoacyl-[acyl-carrier 30.6 1.4E+02 0.0047 24.7 7.2 70 105-179 12-81 (249)
296 3qze_A DHDPS, dihydrodipicolin 30.3 1.4E+02 0.0049 26.1 7.4 54 87-143 75-131 (314)
297 2ew8_A (S)-1-phenylethanol deh 30.1 2.3E+02 0.008 23.3 9.6 95 107-207 7-111 (249)
298 3na8_A Putative dihydrodipicol 30.0 1.1E+02 0.0037 26.9 6.5 54 87-143 76-132 (315)
299 1g94_A Alpha-amylase; beta-alp 29.9 39 0.0013 31.5 3.8 30 198-227 63-92 (448)
300 4fc7_A Peroxisomal 2,4-dienoyl 29.4 2.6E+02 0.0088 23.6 9.1 97 107-208 27-135 (277)
301 2ehh_A DHDPS, dihydrodipicolin 29.4 1.2E+02 0.0043 26.2 6.8 34 110-143 72-108 (294)
302 2ya0_A Putative alkaline amylo 29.3 37 0.0013 33.9 3.7 28 199-226 254-281 (714)
303 4dyv_A Short-chain dehydrogena 29.2 1.9E+02 0.0067 24.4 8.0 96 108-208 29-133 (272)
304 3tsm_A IGPS, indole-3-glycerol 29.1 2.5E+02 0.0084 24.0 8.4 50 165-220 127-176 (272)
305 3ak4_A NADH-dependent quinucli 29.1 2.4E+02 0.0083 23.4 8.6 32 107-138 12-43 (263)
306 2yl5_A Beta-N-acetylhexosamini 28.9 46 0.0016 31.0 4.0 28 191-218 86-113 (442)
307 2nuw_A 2-keto-3-deoxygluconate 28.9 1.3E+02 0.0044 26.0 6.8 51 87-143 51-104 (288)
308 1vl8_A Gluconate 5-dehydrogena 28.7 2.6E+02 0.0088 23.4 9.0 97 106-208 20-129 (267)
309 3mwd_B ATP-citrate synthase; A 28.7 1.1E+02 0.0036 27.3 6.1 75 139-223 65-141 (334)
310 1lwj_A 4-alpha-glucanotransfer 28.6 50 0.0017 30.6 4.3 29 198-226 68-96 (441)
311 3tak_A DHDPS, dihydrodipicolin 28.4 1.4E+02 0.0048 25.8 6.9 54 87-143 53-109 (291)
312 1wjw_A Phosphoacetylglucosamin 28.2 1.4E+02 0.0049 21.4 5.9 39 376-417 59-98 (112)
313 3bzy_B ESCU; auto cleavage pro 28.1 38 0.0013 23.1 2.4 21 202-222 29-49 (83)
314 4imr_A 3-oxoacyl-(acyl-carrier 27.9 2.7E+02 0.0094 23.4 9.0 58 105-162 31-91 (275)
315 1x1t_A D(-)-3-hydroxybutyrate 27.7 2.6E+02 0.009 23.2 9.4 32 108-139 5-36 (260)
316 1ht6_A AMY1, alpha-amylase iso 27.7 52 0.0018 30.1 4.2 29 198-226 67-95 (405)
317 1nff_A Putative oxidoreductase 27.7 2.6E+02 0.0088 23.3 8.5 32 107-138 7-38 (260)
318 3tjr_A Short chain dehydrogena 27.7 2.7E+02 0.0093 23.8 8.8 97 106-207 30-137 (301)
319 3fkr_A L-2-keto-3-deoxyarabona 27.5 2E+02 0.007 25.0 7.9 52 87-141 60-114 (309)
320 1gcy_A Glucan 1,4-alpha-maltot 27.3 56 0.0019 31.2 4.5 31 198-228 91-121 (527)
321 4iin_A 3-ketoacyl-acyl carrier 27.0 2.8E+02 0.0095 23.2 9.5 99 104-207 26-136 (271)
322 3qlj_A Short chain dehydrogena 27.0 2.3E+02 0.0078 24.6 8.2 97 107-208 27-144 (322)
323 3uve_A Carveol dehydrogenase ( 26.9 1.7E+02 0.0059 24.8 7.3 33 106-138 10-42 (286)
324 3tha_A Tryptophan synthase alp 26.9 2.7E+02 0.0092 23.5 8.1 160 32-218 33-204 (252)
325 2cho_A Glucosaminidase, hexosa 26.7 2E+02 0.0067 28.7 8.3 25 104-128 84-108 (716)
326 1mxg_A Alpha amylase; hyperthe 26.5 57 0.0019 30.2 4.2 29 198-226 85-113 (435)
327 2wsb_A Galactitol dehydrogenas 26.4 2.7E+02 0.0091 22.8 8.5 33 106-138 10-42 (254)
328 2yv2_A Succinyl-COA synthetase 26.3 1.1E+02 0.0038 26.6 5.9 49 169-223 84-132 (297)
329 2yxg_A DHDPS, dihydrodipicolin 26.3 1.3E+02 0.0044 26.0 6.3 54 87-143 52-108 (289)
330 4dmm_A 3-oxoacyl-[acyl-carrier 26.3 1.8E+02 0.0063 24.4 7.3 99 105-208 26-136 (269)
331 2j9r_A Thymidine kinase; TK1, 26.1 1.7E+02 0.006 23.9 6.6 102 117-234 43-147 (214)
332 3t7c_A Carveol dehydrogenase; 26.1 3.1E+02 0.011 23.4 9.3 97 106-207 27-147 (299)
333 3nyw_A Putative oxidoreductase 26.1 1.8E+02 0.0063 24.1 7.2 33 107-139 7-39 (250)
334 3sx2_A Putative 3-ketoacyl-(ac 26.0 1.7E+02 0.0059 24.6 7.1 33 106-138 12-44 (278)
335 2aaa_A Alpha-amylase; glycosid 25.8 61 0.0021 30.5 4.4 30 198-227 96-125 (484)
336 3tfo_A Putative 3-oxoacyl-(acy 25.7 3E+02 0.01 23.1 9.0 96 108-208 5-111 (264)
337 2z1k_A (NEO)pullulanase; hydro 25.7 58 0.002 30.5 4.2 29 198-226 95-123 (475)
338 3rkr_A Short chain oxidoreduct 25.7 2.9E+02 0.0099 22.9 9.1 95 107-207 29-136 (262)
339 1wza_A Alpha-amylase A; hydrol 25.6 61 0.0021 30.5 4.4 29 198-226 80-108 (488)
340 2yl6_A Beta-N-acetylhexosamini 25.6 44 0.0015 31.0 3.3 27 192-218 84-110 (434)
341 3rih_A Short chain dehydrogena 25.6 3.1E+02 0.011 23.4 10.4 98 106-208 40-149 (293)
342 3qiv_A Short-chain dehydrogena 25.6 2.8E+02 0.0096 22.8 8.6 57 105-161 7-66 (253)
343 2vc6_A MOSA, dihydrodipicolina 25.4 1.6E+02 0.0054 25.4 6.7 54 87-143 52-108 (292)
344 1ua7_A Alpha-amylase; beta-alp 25.1 56 0.0019 30.1 4.0 30 198-227 73-102 (422)
345 3l77_A Short-chain alcohol deh 25.0 2.7E+02 0.0094 22.5 9.0 94 109-208 4-110 (235)
346 3h5d_A DHDPS, dihydrodipicolin 25.0 1.8E+02 0.0062 25.4 7.0 54 87-143 59-116 (311)
347 1ud2_A Amylase, alpha-amylase; 24.8 52 0.0018 30.9 3.7 29 198-226 79-107 (480)
348 1tks_A 3,4-dihydroxy-2-butanon 24.7 1.2E+02 0.0041 24.7 5.2 34 182-218 160-194 (204)
349 2guy_A Alpha-amylase A; (beta- 24.7 58 0.002 30.6 4.0 29 198-226 96-124 (478)
350 3l21_A DHDPS, dihydrodipicolin 24.6 3.4E+02 0.012 23.5 9.6 54 87-143 67-123 (304)
351 3tsc_A Putative oxidoreductase 24.6 2.1E+02 0.0071 24.1 7.4 32 106-137 10-41 (277)
352 3gem_A Short chain dehydrogena 24.5 1.2E+02 0.004 25.5 5.7 49 106-154 26-74 (260)
353 3sju_A Keto reductase; short-c 24.4 2.9E+02 0.0099 23.3 8.3 95 108-207 25-130 (279)
354 1i4n_A Indole-3-glycerol phosp 24.4 1.1E+02 0.0037 26.0 5.2 49 166-220 109-157 (251)
355 2rhc_B Actinorhodin polyketide 24.3 3.1E+02 0.011 23.0 8.4 31 108-138 23-53 (277)
356 1hvx_A Alpha-amylase; hydrolas 24.3 53 0.0018 31.3 3.7 29 198-226 80-108 (515)
357 3kvo_A Hydroxysteroid dehydrog 24.2 3.7E+02 0.013 23.7 10.7 97 106-207 44-158 (346)
358 3bh4_A Alpha-amylase; calcium, 24.1 54 0.0018 30.8 3.7 29 198-226 77-105 (483)
359 3r1i_A Short-chain type dehydr 24.1 3.2E+02 0.011 23.0 9.5 97 105-207 30-138 (276)
360 3ai3_A NADPH-sorbose reductase 24.1 3.1E+02 0.011 22.7 9.2 33 106-138 6-38 (263)
361 1jae_A Alpha-amylase; glycosid 24.0 55 0.0019 30.7 3.7 30 198-227 73-102 (471)
362 2jah_A Clavulanic acid dehydro 24.0 3E+02 0.01 22.6 8.7 95 107-207 7-113 (247)
363 3tl3_A Short-chain type dehydr 23.9 2E+02 0.0067 23.9 7.0 94 107-208 9-113 (257)
364 2yv1_A Succinyl-COA ligase [AD 23.8 81 0.0028 27.4 4.5 48 170-223 84-131 (294)
365 1jr2_A Uroporphyrinogen-III sy 23.8 1E+02 0.0035 26.4 5.2 77 113-190 139-220 (286)
366 1wpc_A Glucan 1,4-alpha-maltoh 23.6 56 0.0019 30.8 3.7 29 198-226 81-109 (485)
367 1wzl_A Alpha-amylase II; pullu 23.6 74 0.0025 30.8 4.6 29 198-226 218-246 (585)
368 2ya1_A Putative alkaline amylo 23.6 52 0.0018 34.4 3.6 28 199-226 561-588 (1014)
369 3io5_A Recombination and repai 23.5 2.6E+02 0.0087 24.8 7.5 38 118-155 44-82 (333)
370 4aie_A Glucan 1,6-alpha-glucos 23.5 58 0.002 31.1 3.8 28 198-225 78-105 (549)
371 3s5o_A 4-hydroxy-2-oxoglutarat 23.3 3.7E+02 0.012 23.3 13.4 52 87-142 66-121 (307)
372 1j0h_A Neopullulanase; beta-al 23.3 70 0.0024 31.0 4.4 29 198-226 221-249 (588)
373 4fhz_A Phospholipase/carboxyle 23.3 3.5E+02 0.012 23.0 11.6 105 104-212 153-265 (285)
374 3n0v_A Formyltetrahydrofolate 23.3 1.7E+02 0.0058 25.3 6.3 111 85-202 63-184 (286)
375 2vt1_B Surface presentation of 23.2 52 0.0018 23.0 2.4 21 202-222 29-49 (93)
376 2dh2_A 4F2 cell-surface antige 23.2 69 0.0023 29.6 4.1 29 198-226 80-108 (424)
377 3ucx_A Short chain dehydrogena 23.1 3.1E+02 0.011 22.8 8.1 97 106-208 10-119 (264)
378 1uls_A Putative 3-oxoacyl-acyl 22.9 3.1E+02 0.011 22.4 8.4 31 108-138 6-36 (245)
379 2cfc_A 2-(R)-hydroxypropyl-COM 22.9 2.7E+02 0.0093 22.7 7.7 30 109-138 4-33 (250)
380 3dz1_A Dihydrodipicolinate syn 22.8 3.8E+02 0.013 23.3 9.9 52 87-142 60-114 (313)
381 2q5c_A NTRC family transcripti 22.8 2.9E+02 0.01 22.0 7.7 13 202-214 131-143 (196)
382 3bk2_A RNAse J, metal dependen 22.6 1.7E+02 0.0057 28.1 6.9 77 129-214 337-423 (562)
383 2a4k_A 3-oxoacyl-[acyl carrier 22.5 2.8E+02 0.0094 23.2 7.7 54 108-161 7-60 (263)
384 3is3_A 17BETA-hydroxysteroid d 22.4 2.1E+02 0.0071 24.0 6.9 98 106-208 17-126 (270)
385 1geg_A Acetoin reductase; SDR 22.4 3.3E+02 0.011 22.4 8.3 93 109-207 4-108 (256)
386 1xky_A Dihydrodipicolinate syn 22.3 2.3E+02 0.0079 24.5 7.2 54 87-143 64-120 (301)
387 3o1l_A Formyltetrahydrofolate 22.1 1.9E+02 0.0064 25.2 6.4 111 85-202 78-199 (302)
388 1pq4_A Periplasmic binding pro 22.0 2.2E+02 0.0074 24.5 6.9 55 130-190 189-246 (291)
389 1y80_A Predicted cobalamin bin 21.8 2.8E+02 0.0097 22.2 7.3 58 145-213 109-167 (210)
390 3s8m_A Enoyl-ACP reductase; ro 21.8 4.7E+02 0.016 24.0 10.9 80 83-162 37-132 (422)
391 1ea9_C Cyclomaltodextrinase; h 21.8 97 0.0033 30.0 5.0 29 198-226 217-245 (583)
392 2rfg_A Dihydrodipicolinate syn 21.8 2.1E+02 0.007 24.8 6.7 88 110-220 72-162 (297)
393 3sc4_A Short chain dehydrogena 21.7 3.6E+02 0.012 22.7 10.8 98 105-208 7-123 (285)
394 3edm_A Short chain dehydrogena 21.7 3.5E+02 0.012 22.4 9.9 98 106-208 7-117 (259)
395 3auf_A Glycinamide ribonucleot 21.6 2.3E+02 0.008 23.4 6.7 88 110-202 26-119 (229)
396 1f6k_A N-acetylneuraminate lya 21.6 2E+02 0.0069 24.8 6.6 54 87-143 56-112 (293)
397 3lou_A Formyltetrahydrofolate 21.5 1.8E+02 0.0061 25.2 6.2 111 86-203 69-190 (292)
398 4b79_A PA4098, probable short- 21.4 3.6E+02 0.012 22.5 9.0 93 108-208 12-106 (242)
399 3av3_A Phosphoribosylglycinami 21.3 2.3E+02 0.0077 23.1 6.5 87 111-202 8-100 (212)
400 1yb1_A 17-beta-hydroxysteroid 21.2 3.5E+02 0.012 22.6 8.1 57 105-161 29-88 (272)
401 3a28_C L-2.3-butanediol dehydr 21.2 3.5E+02 0.012 22.3 8.0 30 109-138 4-33 (258)
402 1snn_A DHBP synthase, 3,4-dihy 21.1 81 0.0028 26.2 3.6 35 181-218 178-212 (227)
403 3dhu_A Alpha-amylase; structur 21.1 68 0.0023 29.8 3.7 29 198-226 82-110 (449)
404 1m7x_A 1,4-alpha-glucan branch 21.0 1E+02 0.0036 30.0 5.1 31 197-227 202-232 (617)
405 2wc7_A Alpha amylase, catalyti 21.0 77 0.0026 29.8 4.0 28 199-226 102-129 (488)
406 1hjs_A Beta-1,4-galactanase; 4 20.9 3.3E+02 0.011 23.9 8.0 36 189-224 49-84 (332)
407 2fp4_A Succinyl-COA ligase [GD 20.8 1.1E+02 0.0038 26.7 4.7 49 170-224 85-134 (305)
408 3t4x_A Oxidoreductase, short c 20.7 3.7E+02 0.013 22.4 8.8 97 105-207 8-114 (267)
409 3ijr_A Oxidoreductase, short c 20.7 3.9E+02 0.013 22.6 9.3 98 106-208 46-156 (291)
410 3oec_A Carveol dehydrogenase ( 20.6 2.8E+02 0.0096 24.0 7.5 97 106-207 45-164 (317)
411 3cpr_A Dihydrodipicolinate syn 20.6 4.1E+02 0.014 22.9 10.9 88 87-177 68-167 (304)
412 2fki_A Protein YJBR; NESG, GFT 20.4 1.7E+02 0.0057 21.6 5.0 47 365-412 55-103 (126)
413 1zk4_A R-specific alcohol dehy 20.3 3.5E+02 0.012 22.0 8.6 32 107-138 6-37 (251)
414 1zja_A Trehalulose synthase; s 20.3 84 0.0029 30.2 4.2 29 198-226 78-106 (557)
415 3kts_A Glycerol uptake operon 20.2 1.8E+02 0.006 23.5 5.4 42 169-218 18-59 (192)
416 3a5f_A Dihydrodipicolinate syn 20.2 2.3E+02 0.0077 24.4 6.6 54 87-143 53-109 (291)
417 1oi7_A Succinyl-COA synthetase 20.2 1.3E+02 0.0046 25.9 5.1 49 170-224 78-126 (288)
418 3t7y_A YOP proteins translocat 20.1 53 0.0018 23.2 2.0 21 202-222 44-64 (97)
419 3gi1_A LBP, laminin-binding pr 20.0 3.3E+02 0.011 23.3 7.6 75 130-217 178-255 (286)
420 2ojp_A DHDPS, dihydrodipicolin 20.0 2E+02 0.0069 24.8 6.3 53 87-143 53-109 (292)
421 3pgx_A Carveol dehydrogenase; 20.0 2.8E+02 0.0094 23.4 7.2 33 106-138 14-46 (280)
No 1
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=100.00 E-value=6.3e-55 Score=419.52 Aligned_cols=406 Identities=34% Similarity=0.677 Sum_probs=332.9
Q ss_pred cccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCC
Q 014769 6 ENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSG 85 (419)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g 85 (419)
.+.|+... +.+.+...+.|+.+++.+... .+.++++|+|+.|+|...+.+++++.+++++.+.+.......|+++.|
T Consensus 21 ~~~w~~~~-~~~~~~~~~~i~~~~~~~~~~--~~~~~~~i~l~~g~~~~~g~~~~~~~v~~a~~~~~~~~~~~~y~~~~g 97 (427)
T 3dyd_A 21 QSMWSVRP-SDMAKKTFNPIRAIVDNMKVK--PNPNKTMISLSIGDPTVFGNLPTDPEVTQAMKDALDSGKYNGYAPSIG 97 (427)
T ss_dssp ---CCCCC-CC----------------CCC--CCTTSCCEECCCSCTTTTSSSCCCHHHHHHHHHHHHHCCSSSCCCTTC
T ss_pred ccccCcch-hhHhhcccchHHHHHHHHhhc--ccCCCCEEeCCCcCCCccCCCCCCHHHHHHHHHHHhcCcCCCCCCCCC
Confidence 45798554 446666677799988765432 344678899999998765567889999999999988766678998899
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (419)
..++|+++++++.+. +..+++++|++|+|+++++..++.+++++||+|++++|+|.++...++..|.+++.++++++.+
T Consensus 98 ~~~lr~~la~~~~~~-~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 176 (427)
T 3dyd_A 98 FLSSREEIASYYHCP-EAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYKTLAESMGIEVKLYNLLPEKS 176 (427)
T ss_dssp CHHHHHHHHHHHCBT-TBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEEGGGT
T ss_pred cHHHHHHHHHHHhhc-CCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecccccC
Confidence 999999999999765 6668889999999999999999999999999999999999999999999999999999877677
Q ss_pred cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
+.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++..+.++..++.+.+++
T Consensus 177 ~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~~~~~~~~~~~~~vi 256 (427)
T 3dyd_A 177 WEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCKYEPLATLSTDVPIL 256 (427)
T ss_dssp TEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCCCCCGGGGCSSCCEE
T ss_pred CCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCcCccHHHhCCCCcEE
Confidence 88999999999988889999999999999999999999999999999999999999999998887776777777777789
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI 325 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (419)
+++|+||.|+++|+|+||++++++..... +++++.+......+++++++.|.++..+|+....+++++++++++++++.
T Consensus 257 ~~~S~sK~~~~~G~riG~~~~~~~~~~~~-~~i~~~l~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~~~~ 335 (427)
T 3dyd_A 257 SCGGLAKRWLVPGWRLGWILIHDRRDIFG-NEIRDGLVKLSQRILGPCTIVQGALKSILCRTPGEFYHNTLSFLKSNADL 335 (427)
T ss_dssp EEEESTTTSSCGGGCCEEEEEECSTTSSH-HHHHHHHHHHHHHHCCSCHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHH
T ss_pred EEeeccccCCCcCcceEEEEecCcchhhH-HHHHHHHHHHHhccCCCCHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999986432221 24666666554335788999999999999865568889999999999999
Q ss_pred HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHH
Q 014769 326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGL 405 (419)
Q Consensus 326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l 405 (419)
+.+.|+++|++. +..|++|+|+|+.++....+...+..+++.+|++++||.+.||..|+.++++||+++.++++|++++
T Consensus 336 l~~~L~~~~g~~-~~~p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~gV~v~~g~~~~~~~~iRis~~~~~e~i~~~l 414 (427)
T 3dyd_A 336 CYGALAAIPGLR-PVRPSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQSVHCLPATCFEYPNFIRVVITVPEVMMLEAC 414 (427)
T ss_dssp HHHHHHHSTTEE-EECCSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEESCSCHHHHHHHH
T ss_pred HHHHHhcCCCce-ecCCCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHCCEEEECCcccCCCCeEEEEECCCHHHHHHHH
Confidence 999999988887 4479999999998874332222357788888888899999999999889999999999999999999
Q ss_pred HHHHHHHHHHhc
Q 014769 406 GRMKAFCQRHTK 417 (419)
Q Consensus 406 ~~l~~~~~~~~~ 417 (419)
++|+++++++.+
T Consensus 415 ~~l~~~l~~~~~ 426 (427)
T 3dyd_A 415 SRIQEFCEQHYH 426 (427)
T ss_dssp HHHHHHHHHHCC
T ss_pred HHHHHHHHHhhc
Confidence 999999998763
No 2
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=100.00 E-value=2.3e-51 Score=389.62 Aligned_cols=377 Identities=23% Similarity=0.391 Sum_probs=317.1
Q ss_pred CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (419)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (419)
.+++....+.+.++.+.....+ ... .++++|+|+.|+|. +++++.+.+++.+.+.... ..|++..|..++|++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ 76 (385)
T 1b5p_A 4 LSRRVQAMKPSATVAVNAKALE-LRR-QGVDLVALTAGEPD----FDTPEHVKEAARRALAQGK-TKYAPPAGIPELREA 76 (385)
T ss_dssp CCHHHHHCCCCHHHHHHHHHHH-HHH-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHH
T ss_pred hhhHHhhcCcchHHHHHHHHHH-HHh-cCCCEEEecCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence 3455666777778777764433 222 36789999999863 4567889999988886543 479888899999999
Q ss_pred HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
+++++.+.+|..+++++|++|+|++++++.++.+++++||+|++++|+|..+...++..|.+++.+++++++++.+|++.
T Consensus 77 ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 156 (385)
T 1b5p_A 77 LAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYPEMVRFAGGVVVEVETLPEEGFVPDPER 156 (385)
T ss_dssp HHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCcccCCCCCHHH
Confidence 99999998888889999999999999999999999999999999999999999999999999999998764567899999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. +++++++||||
T Consensus 157 l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~-~~~i~~~s~SK 234 (385)
T 1b5p_A 157 VRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEG-EHFSPGRVAP-EHTLTVNGAAK 234 (385)
T ss_dssp HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSS-CCCCGGGTCT-TTEEEEEESTT
T ss_pred HHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCC-CCCCHHHcCC-CCEEEEEechh
Confidence 999998888999999999999999999999999999999999999999999998876 4445555544 67999999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHccc--chHHHHHHHHHHHHHHHHHHHH
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKT--KEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
.++++|+|+||+++++ ++++.+..... .+.+++.+.|.++.++++.. ..+++++.+++++++++.+.+.
T Consensus 235 ~~~~~G~RiG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ 306 (385)
T 1b5p_A 235 AFAMTGWRIGYACGPK--------EVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREAYRRRRDLLLEG 306 (385)
T ss_dssp TTTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcccceEEEEeCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999864 57777776543 34577888999988888641 1467888899999999999999
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
|+++ ++. +..|++++|+|+.++.. + .+..++...|+ ++||.+.||..|+.++++||+++.++++|++++++|+
T Consensus 307 L~~~-g~~-~~~~~~~~~~~~~~~~~---~-~~~~~l~~~l~-~~gv~v~~g~~f~~~~~iRis~~~~~~~i~~~l~~l~ 379 (385)
T 1b5p_A 307 LTAL-GLK-AVRPSGAFYVLMDTSPI---A-PDEVRAAERLL-EAGVAVVPGTDFAAFGHVRLSYATSEENLRKALERFA 379 (385)
T ss_dssp HHHH-TCC-BCCCSBTTEEEEECTTT---C-SSHHHHHHHHH-HTTEECEESGGGTCTTEEEEECCSCHHHHHHHHHHGG
T ss_pred HHHC-CCe-ecCCCeeEEEEEecCCC---C-CCHHHHHHHHH-HCCeEEecccccCCCCeEEEEecCCHHHHHHHHHHHH
Confidence 9987 777 45788999999988631 1 25678888886 7899999999998788999999989999999999998
Q ss_pred HHHH
Q 014769 410 AFCQ 413 (419)
Q Consensus 410 ~~~~ 413 (419)
++++
T Consensus 380 ~~l~ 383 (385)
T 1b5p_A 380 RVLG 383 (385)
T ss_dssp GGC-
T ss_pred HHHh
Confidence 7764
No 3
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=100.00 E-value=4.7e-51 Score=391.63 Aligned_cols=403 Identities=29% Similarity=0.554 Sum_probs=328.3
Q ss_pred cccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCH
Q 014769 8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87 (419)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~ 87 (419)
.|+...+. ..+.....++.+..... .. ..+.++|+|+.|+|..++.+++++.+.+++.+.+.......|++..|..
T Consensus 3 ~~~~~~~~-~~~~~~~~~~~~~~~~~-~~--~~~~~~i~l~~g~p~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~ 78 (416)
T 1bw0_A 3 SWDVSMSN-HAGLVFNPIRTVSDNAK-PS--PSPKPIIKLSVGDPTLDKNLLTSAAQIKKLKEAIDSQECNGYFPTVGSP 78 (416)
T ss_dssp -CCCCCCH-HHHTCCCHHHHHHHTCC-CC--CSCSCCEECCCCCTTTTSCSCCCHHHHHHHHHHHHTTCSSSCCCTTCCH
T ss_pred ccccCchh-hhhccccHHHHHHHHHH-Hh--hcCCCeEEecCcCCCcccCCCCCHHHHHHHHHHhhCCccCCcCCCCCCH
Confidence 48886554 55565666777665321 11 1236799999999865445788999999999998766556898888999
Q ss_pred HHHHHHHHHHHh------hCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 88 PARRAIADYLSR------DLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 88 ~lr~~ia~~l~~------~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
++|+++++++.+ ..|..+++++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.++++
T Consensus 79 ~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~ 158 (416)
T 1bw0_A 79 EAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYETVCKAYGIGMHFYNCR 158 (416)
T ss_dssp HHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHHHHHHHcCcEEEEeecC
Confidence 999999999982 25666788999999999999999999999999999999999999999999999999999886
Q ss_pred CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC----CCCCccc
Q 014769 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI----PYTPMGL 237 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~----~~~~~~~ 237 (419)
++.++.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++. ...++..
T Consensus 159 ~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 238 (416)
T 1bw0_A 159 PENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVFKGKDPNATFTSVAD 238 (416)
T ss_dssp GGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCCSSCTTCCCCCTTS
T ss_pred cccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCCCccCHHH
Confidence 655678999999999988888999999999999999999999999999999999999999999888765 4455555
Q ss_pred cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
++...++++++|+||.|+++|+|+||++++++..+.. .+...++.....+++++++.|.++..+|+....+++++.++
T Consensus 239 ~~~~~~~i~~~s~sK~~~~~Glr~G~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 316 (416)
T 1bw0_A 239 FETTVPRVILGGTAKNLVVPGWRLGWLLYVDPHGNGP--SFLEGLKRVGMLVCGPCTVVQAALGEALLNTPQEHLDQIVA 316 (416)
T ss_dssp SCCSCCEEEEEESTTTTSCGGGCCEEEEEECTTCSCH--HHHHHHHHHHHHHTCSCHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred ccCCCcEEEEecchhhCCCCCceEEEEEeeCchhhHH--HHHHHHHHHhccccCCCcHHHHHHHHHHhcccHHHHHHHHH
Confidence 5555578999999999999999999999976411221 23334433322346788999999999998644678889999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~ 397 (419)
+++++++.+.+.|+++|++. +..|.+|+|+|++++........+..+++.++++++||.+.||..|+.++++||+++.+
T Consensus 317 ~~~~~~~~l~~~L~~~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~iRis~~~~ 395 (416)
T 1bw0_A 317 KIEESAMYLYNHIGECIGLA-PTMPRGAMYLMSRIDLEKYRDIKTDVEFFEKLLEEENVQVLPGTIFHAPGFTRLTTTRP 395 (416)
T ss_dssp HHHHHHHHHHHHHTTSTTEE-ECCCCBTTEEEEEECGGGBSSCCSHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSC
T ss_pred HHHHHHHHHHHHHHhCCCCc-ccCCCeeEEEEEeCCHHHcCCCCCHHHHHHHHHHHCCEEEecccccCCCCeEEEEecCC
Confidence 99999999999999888887 44688899999988643211112567788888778899999999998889999999988
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q 014769 398 PSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~~~~ 417 (419)
++++++++++|.++++++.+
T Consensus 396 ~e~l~~~l~~l~~~l~~~~~ 415 (416)
T 1bw0_A 396 VEVYREAVERIKAFCQRHAA 415 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999988765
No 4
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=100.00 E-value=4.6e-50 Score=387.26 Aligned_cols=383 Identities=21% Similarity=0.290 Sum_probs=322.4
Q ss_pred cccccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCC
Q 014769 6 ENKWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATN 83 (419)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~ 83 (419)
..+|+..++++.+..+.+.++.+.... . ++++|+|+.|.|.. .+.+++.+.+++.+.+... ...+|+++
T Consensus 47 ~~~~~~~~s~~~~~~~~s~~~~~~~~~-~------~~~~i~l~~g~p~~--~~~p~~~v~~a~~~~l~~~~~~~~~Y~~~ 117 (448)
T 3aow_A 47 LGDVERFFSKKALEMRASEVRELLKLV-E------TSDIISLAGGLPNP--KTFPKEIIRDILVEIMEKYADKALQYGTT 117 (448)
T ss_dssp TSCGGGGCCHHHHHCCCCHHHHHHHHH-H------TSSSEECCCCCCCG--GGSCHHHHHHHHHHHHHHSHHHHHSCCCT
T ss_pred ccchHHHhhHHHhcCCCcHHHHHHHhc-c------CCCcEeCCCCCCCc--hhCCHHHHHHHHHHHHHhhhHHHhCCCCC
Confidence 466998889888888888888887632 1 46799999998763 2346788999988887653 13479988
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE 163 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~ 163 (419)
.|..++|++|++++.+.+|.. ++++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.++++++
T Consensus 118 ~g~~~lr~~ia~~~~~~~g~~-~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~ 196 (448)
T 3aow_A 118 KGFTPLRETLMKWLGKRYGIS-QDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAALQAFNFYEPQYIQIPLDDE 196 (448)
T ss_dssp TCCHHHHHHHHHHHHHHHCCC-TTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT
T ss_pred CCcHHHHHHHHHHHHHhcCcC-ChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHHHHHHHcCCEEEEeccCCC
Confidence 999999999999997777766 7899999999999999999999999999999999999999999999999999988642
Q ss_pred CCcccChHHHHHhhc----C--CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769 164 RNWEVDLDAVEALAD----K--NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (419)
Q Consensus 164 ~~~~~~~~~l~~~~~----~--~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 236 (419)
++|++.|+++++ + ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++.
T Consensus 197 ---g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~~~~~~~ 273 (448)
T 3aow_A 197 ---GMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGNPEKKIK 273 (448)
T ss_dssp ---EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSCCCCCTG
T ss_pred ---CCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHH
Confidence 489999999887 5 67777 4679999999999999999999999999999999999999998876666676
Q ss_pred ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHH
Q 014769 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCK 314 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~ 314 (419)
.++..+++++++||||.++ +|+|+||+++++ ++++.+..... .+.+++.+.|.++..+|+... .+++++
T Consensus 274 ~~~~~~~vi~~~S~SK~~~-~GlriG~v~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~ 344 (448)
T 3aow_A 274 ALDNEGRVIYLGTFSKILA-PGFRIGWMVGDP--------GIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPE 344 (448)
T ss_dssp GGCTTSCEEEEEESTTTTC-GGGCCEEEEECH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hcCCCCCEEEEccchhhcc-ccccEEEEEeCH--------HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence 6766678999999999987 999999999975 57777776543 345678999999999998642 467888
Q ss_pred HHHHHHHHHHHHHHHhhc-CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CC
Q 014769 315 LIDTLRESAEICYDGVKE-IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KN 388 (419)
Q Consensus 315 ~~~~~~~~~~~l~~~l~~-~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~ 388 (419)
.++.++++++.+.+.|++ +| ++. +..|.+|+|+|++++.. .+..+++.+++++ ||.+.||..|+. .+
T Consensus 345 ~~~~~~~~~~~l~~~L~~~~~~g~~-~~~p~~g~~~~v~~~~~-----~~~~~l~~~l~~~-gV~v~pg~~f~~~~~~~~ 417 (448)
T 3aow_A 345 IRKFYKPRRDAMLEALEEFMPEGVK-WTKPEGGMFIWVTLPDG-----IDSKKMLERAIKK-GVAYVPGEAFYAHRDVKN 417 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCTTCE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHHT-TEECEEGGGGSTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCeE-EeCCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CcEEEcchhhcCCCCCCC
Confidence 899999999999999987 67 577 44788999999999742 2567888888665 999999998853 57
Q ss_pred eEEEEeec-CHHHHHHHHHHHHHHHHHHhc
Q 014769 389 WLRIAFCA-EPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 389 ~~Ris~~~-~~~~l~~~l~~l~~~~~~~~~ 417 (419)
++||+++. ++++|++++++|.+++++..+
T Consensus 418 ~iRls~~~~~~e~i~~~~~~L~~~l~~~~~ 447 (448)
T 3aow_A 418 TMRLNFTYVDEDKIMEGIKRLAETIKEELK 447 (448)
T ss_dssp EEEEECSSSCTHHHHHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 99999975 789999999999999988765
No 5
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=100.00 E-value=4.5e-49 Score=374.41 Aligned_cols=381 Identities=21% Similarity=0.368 Sum_probs=318.2
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++....+.+.+..+.....+ .. ..++++|+|+.|.|. ++.++.+.+++.+.+... ...|++..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~l 76 (388)
T 1j32_A 4 AARVESVSPSMTLIIDAKAKA-MK-AEGIDVCSFSAGEPD----FNTPKHIVEAAKAALEQG-KTRYGPAAGEPRLREAI 76 (388)
T ss_dssp CHHHHTSCCCSSTTTHHHHHH-HH-TTTCCCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred hhHhHhCCccHHHHHHHHHHH-HH-hcCCCEEECCCCCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHH
Confidence 345555666666666653333 22 247889999999863 456789999999888654 34799888999999999
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
++++.+.+|..+++++|++|+|+++++..++++++++||+|++++|+|+++...++..|.+++.++++++.++.+|++.|
T Consensus 77 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l 156 (388)
T 1j32_A 77 AQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYPEMVKLAEGTPVILPTTVETQFKVSPEQI 156 (388)
T ss_dssp HHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCGGGTTCCCHHHH
T ss_pred HHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCEEEEecCCcccCCCCCHHHH
Confidence 99999888877888999999999999999999999999999999999999999999999999999886545678999999
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCC
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSIS 251 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~s 251 (419)
+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+|
T Consensus 157 ~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~s 236 (388)
T 1j32_A 157 RQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQHLSIGAASPEAYERSVVCSGFA 236 (388)
T ss_dssp HHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEEEST
T ss_pred HHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCCCHHHccccccCCEEEEeech
Confidence 9999888889999999999999999999999999999999999999999999887765555555543 34689999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
|.++++|+|+||+++++ ++++.++.... .+++++.+.|.++..+|+.. .+++++.+++++++++.+.+.|
T Consensus 237 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L 307 (388)
T 1j32_A 237 KTYAMTGWRVGFLAGPV--------PLVKAATKIQGHSTSNVCTFAQYGAIAAYENS-QDCVQEMLAAFAERRRYMLDAL 307 (388)
T ss_dssp TTTTCTTTCCEEEECCH--------HHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHH
Confidence 99988999999999865 57777766543 34667888888888888743 4678889999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
+++|++. +..|.+++++|+.++... .+..++...|++++||.+.||..|+.++++|++++.+++++++++++|++
T Consensus 308 ~~~~g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 382 (388)
T 1j32_A 308 NAMPGLE-CPKPDGAFYMFPSIAKTG----RSSLDFCSELLDQHQVATVPGAAFGADDCIRLSYATDLDTIKRGMERLEK 382 (388)
T ss_dssp HTCTTCB-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHHCEECEEGGGGTCTTBEEEECCSCHHHHHHHHHHHHH
T ss_pred hhCCCCc-ccCCCeeEEEEEecCCCC----CCHHHHHHHHHHhCCEEEeChhhhCCCCcEEEEecCCHHHHHHHHHHHHH
Confidence 9988888 447888999998875311 25678888887768999999998887899999999899999999999999
Q ss_pred HHHHH
Q 014769 411 FCQRH 415 (419)
Q Consensus 411 ~~~~~ 415 (419)
+++++
T Consensus 383 ~l~~~ 387 (388)
T 1j32_A 383 FLHGI 387 (388)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 98765
No 6
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=100.00 E-value=3.5e-49 Score=375.56 Aligned_cols=374 Identities=19% Similarity=0.334 Sum_probs=305.9
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 96 (419)
.....+..++.+.... ..+. .+++++|||+.|++. +++++.+.+++.+.+.... ..|+++.|..++|++++++
T Consensus 8 ~~~~~~~~~~~~~~~~-~~~~-~~g~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ia~~ 80 (391)
T 3h14_A 8 RSAVDPFIVMDVMEAA-RRAE-EAGRRIIHMEVGQPG----TGAPRGAVEALAKSLETDA-LGYTVALGLPALRQRIARL 80 (391)
T ss_dssp TTCCCCCTTHHHHHHH-HHHH-HTTCCCEECCCSSCS----SCSCHHHHHHHHHHHC-----------CCHHHHHHHHHH
T ss_pred HhhcCcchHHHHHHHH-HHHH-hcCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCChHHHHHHHHHH
Confidence 4455566667766533 3332 348899999999854 5668899999999886543 4899888999999999999
Q ss_pred HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769 97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
+.+.+|..+++++|++|+|++++++.++.+++++||+|++++|+|.++...++..|.+++.+++++++++.+|++.++++
T Consensus 81 ~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~ 160 (391)
T 3h14_A 81 YGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYRQILRALGLVPVDLPTAPENRLQPVPADFAGL 160 (391)
T ss_dssp HHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECCGGGTTSCCHHHHTTS
T ss_pred HHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCcccCCCCCHHHHHhc
Confidence 99888888899999999999999999999999999999999999999999999999999999987766778899999876
Q ss_pred hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCC
Q 014769 177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLV 256 (419)
Q Consensus 177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~ 256 (419)
++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++... ++..+ .+++++++|+||.+++
T Consensus 161 ---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~--~~~~i~~~s~sK~~g~ 234 (391)
T 3h14_A 161 ---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV-TALEL--TDECYVINSFSKYFSM 234 (391)
T ss_dssp ---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC-CGGGT--CSSSEEEEESSSTTCC
T ss_pred ---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc-Chhhc--CCCEEEEEechhccCC
Confidence 68899999999999999999999999999999999999999999998876532 32233 3568999999999988
Q ss_pred CCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+|+|+||+++++ ++++.+..... .+++++.+.+.++.++++ ..+++++.+++++++++.+.+.|+++ +
T Consensus 235 ~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~--~~~~~~~~~~~~~~~~~~l~~~l~~~-~ 303 (391)
T 3h14_A 235 TGWRVGWMVVPE--------DQVRVVERIAQNMFICAPHASQVAALAALD--CDAELQANLDVYKANRKLMLERLPKA-G 303 (391)
T ss_dssp TTSCCEEEECCG--------GGHHHHHHHHHHTTCCCCHHHHHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHHH-T
T ss_pred ccceeEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHhC--ChHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 999999999865 46677766543 356778889988888887 36888999999999999999999987 4
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
+..+..|.+++++|+.++... .+..++..++++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~~ 379 (391)
T 3h14_A 304 FTRIAPPDGAFYVYADVSDLT----DDSRAFAAEILEKAGVAVTPGLDFDPERGAGTLRFSYARATADIEEGLDRLEAFM 379 (391)
T ss_dssp CCCBCCCCBTTEEEEECTTTC----SCHHHHHHHHHHHHCEECEEGGGTCTTTGGGEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCcccCCCeeEEEEEecCccC----CCHHHHHHHHHHHCCEEEcCchhhCCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 443447888899999887421 25778888888878999999999976 67999999888999999999999999
Q ss_pred HHHhcc
Q 014769 413 QRHTKK 418 (419)
Q Consensus 413 ~~~~~~ 418 (419)
+++...
T Consensus 380 ~~~~~~ 385 (391)
T 3h14_A 380 QARGEG 385 (391)
T ss_dssp HHC---
T ss_pred HHhccc
Confidence 887653
No 7
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=100.00 E-value=1.2e-49 Score=382.54 Aligned_cols=382 Identities=20% Similarity=0.363 Sum_probs=322.7
Q ss_pred ccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-CCCCCCCCCCHHH
Q 014769 11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-FNCYATNSGIPPA 89 (419)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-~~~Y~~~~g~~~l 89 (419)
...++++...+++.++.+... .. +.++|+|+.|+|. +++++.+.+++.+.+.... ...|+++.|..++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~-~~------~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~l 72 (422)
T 3fvs_A 4 QLQARRLDGIDYNPWVEFVKL-AS------EHDVVNLGQGFPD----FPPPDFAVEAFQHAVSGDFMLNQYTKTFGYPPL 72 (422)
T ss_dssp CCSCGGGTTCCCCHHHHHHHH-HH------TSCCEECCCSSCS----SCCCHHHHHHHHHHHHSCGGGGSCCCTTCCHHH
T ss_pred hhHHHHhhccCccHHHHHHHH-hh------cCCceEeCCCCCC----CCCCHHHHHHHHHHHhCCCccCCCCCCCCCHHH
Confidence 345566677777778777652 22 5689999999863 5678999999999987654 4589988899999
Q ss_pred HHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC------
Q 014769 90 RRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP------ 162 (419)
Q Consensus 90 r~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~------ 162 (419)
|+++++++.+.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|.++...++..|.+++.+++++
T Consensus 73 r~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~G 152 (422)
T 3fvs_A 73 TKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYEPMTMMAGGRPVFVSLKPGPIQNG 152 (422)
T ss_dssp HHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCCCSS
T ss_pred HHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhHHHHHHcCCEEEEEeccccccccc
Confidence 999999999888888888 7999999999999999999999999999999999999999999999999999875
Q ss_pred ----CCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 163 ----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 163 ----~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
..++.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+
T Consensus 153 ~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 232 (422)
T 3fvs_A 153 ELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVYQWMVYDGHQHISIASL 232 (422)
T ss_dssp SCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGS
T ss_pred ccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCChhhc
Confidence 2356789999999998889999999999999999999999999999999999999999999999887666666555
Q ss_pred CC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc------cchH
Q 014769 239 GS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK------TKED 310 (419)
Q Consensus 239 ~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~------~~~~ 310 (419)
.. .++++++.|+||.++++|+|+||+++++ ++++.+..... ..++++++.|.++..+++. ...+
T Consensus 233 ~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 304 (422)
T 3fvs_A 233 PGMWERTLTIGSAGKTFSATGWKVGWVLGPD--------HIMKHLRTVHQNSVFHCPTQSQAAVAESFEREQLLFRQPSS 304 (422)
T ss_dssp TTTGGGEEEEEEHHHHHTCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHHTTTCTTC
T ss_pred ccccCcEEEEecchhccCCccceEEEEEeCH--------HHHHHHHHHHhhccCCCCcHHHHHHHHHHhhccccccchHH
Confidence 43 3678999999999999999999999865 57777766543 3567788999999888874 1246
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCC---------HHHHHHHHHHhcCeEeecC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIND---------DIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~---------~~~~~~~ll~~~gv~v~~g 381 (419)
++++.+++++++++.+.+.|+++ ++. +..|++|+|+|+.++..... ..+ +.+++..+++++||.+.||
T Consensus 305 ~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (422)
T 3fvs_A 305 YFVQFPQAMQRCRDHMIRSLQSV-GLK-PIIPQGSYFLITDISDFKRK-MPDLPGAVDEPYDRRFVKWMIKNKGLVAIPV 381 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECHHHHHH-CCCCCCCTTCCHHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCe-ecCCCeeeEEEEechhhccc-ccccccccccccHHHHHHHHHHhcCEEEeCc
Confidence 78889999999999999999998 777 44789999999988642110 001 5578888888899999999
Q ss_pred CCCCC-------CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 382 IYVGL-------KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 382 ~~~~~-------~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+.|+. .+++||+++.++++|++++++|++++++
T Consensus 382 ~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 421 (422)
T 3fvs_A 382 SIFYSVPHQKHFDHYIRFCFVKDEATLQAMDEKLRKWKVE 421 (422)
T ss_dssp GGGSCHHHHTTSCSEEEEECCCCHHHHHHHHHHHHHHHHC
T ss_pred HHhcCCcCCCCCCCeEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 98853 6899999988999999999999998864
No 8
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=100.00 E-value=5.3e-49 Score=384.68 Aligned_cols=388 Identities=18% Similarity=0.293 Sum_probs=312.0
Q ss_pred HHHHHHHHHHhhhcCCCC----CeeeccCCCCCCCCCCC-------------------------ChHHHHHHHHHHHhCC
Q 014769 25 VKTSLASIIDSVNKNDPR----PVVPLGYGDPTAFPCFR-------------------------TAVEAEDAIVDAVRSG 75 (419)
Q Consensus 25 i~~~~~~~~~~~~~~~~~----~~i~l~~g~~~~~~~~~-------------------------~~~~v~~a~~~~~~~~ 75 (419)
|...++++.+++.+..+. ++|+.++|+|...+..| .++.+.++..+.+...
T Consensus 43 ~~~~a~~~~~~~~~~~~~~~~~~~i~~~iG~~~~~~~~p~~~~~~~~~~~~~p~~i~~~~~~~~~p~~~~~~a~~~l~~~ 122 (500)
T 3tcm_A 43 IVIHAQRLQEQLKTQPGSLPFDEILYCNIGNPQSLGQQPVTFFREVLALCDHPDLLQREEIKTLFSADSISRAKQILAMI 122 (500)
T ss_dssp HHHHHHHHHHHHHHSTTSSSSSSCEECSSCCGGGTTCCCCHHHHHHHHHHHSGGGGGCTTHHHHSCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHhhCCCCCCHHHhhhhcCcChhhcCCCCCcHHHHHHHhhcCcccccCCCCcccCCHHHHHHHHHHHHcC
Confidence 444455555555554455 89999999985443321 3444556566666652
Q ss_pred ---CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-CCCCeEEeeCCCCCCcHHHHhhc
Q 014769 76 ---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-RPGANVLLPRPGWPYYEGIAQRK 151 (419)
Q Consensus 76 ---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-~~gd~vlv~~p~~~~~~~~~~~~ 151 (419)
....|+++.|..++|+++++++.+.+|..+++++|++|+|+++++..++.+++ ++||+|+++.|+|+.+...+...
T Consensus 123 ~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~~~~~~~ 202 (500)
T 3tcm_A 123 PGRATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYSASIALH 202 (500)
T ss_dssp TTSCSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHHHHHHHT
T ss_pred CCCcCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHHHHHHHc
Confidence 45689999999999999999999888888999999999999999999999998 79999999999999999999999
Q ss_pred CCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769 152 QVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225 (419)
Q Consensus 152 g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 225 (419)
|.+++.++++++.+|.+|++.|++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+
T Consensus 203 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~~ 282 (500)
T 3tcm_A 203 GGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQEN 282 (500)
T ss_dssp TCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred CCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCcccc
Confidence 9999999998887899999999998876 6788999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCcc----cc---CCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHH
Q 014769 226 TFGSI-PYTPMG----LF---GSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFI 296 (419)
Q Consensus 226 ~~~~~-~~~~~~----~~---~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 296 (419)
.|++. ...++. .+ ....++++++||||.| +++|+|+||+++.... +++++.+........+++.+.
T Consensus 283 ~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~-----~~~~~~l~~~~~~~~~~~~~~ 357 (500)
T 3tcm_A 283 IYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFS-----APVREQIYKIASVNLCSNITG 357 (500)
T ss_dssp BCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCC-----TTHHHHHHHHHHTTCCCCHHH
T ss_pred ccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCC-----HHHHHHHHHHHhcccCCCHHH
Confidence 88643 344432 12 2334689999999998 8899999999983210 157777777665567789999
Q ss_pred HHHHHHHHccc---------chHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecC--ccc-----ccCC
Q 014769 297 QGAIPQILEKT---------KEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLN--PWL-----LEDI 360 (419)
Q Consensus 297 ~~a~~~~l~~~---------~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~--~~~-----~~~~ 360 (419)
|.++..++... ..++..+.+++++++++.+.+.|+++|++.+ ..|++|+|+|+++. ... ..+.
T Consensus 358 q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~~-~~~~g~~~~~~~~~lp~~~~~~~~~~g~ 436 (500)
T 3tcm_A 358 QILASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLEGITC-NEAEGAMYVFPQICLPQKAIEAAKAANK 436 (500)
T ss_dssp HHHHHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEC-CCCCBTTEECCEECCCHHHHHHHHHHTS
T ss_pred HHHHHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEE-ecCCeEEEEeeeecCchhhHHHHHhcCC
Confidence 99999888631 1245667788899999999999999889884 48999999996553 210 0112
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
.++..++.++++++||.+.||+.|+. ..+||++++.+++++++++++|+++++++.++
T Consensus 437 ~~~~~~~~~ll~~~gI~v~pg~~f~~~~g~~~iRis~~~~~e~i~~~i~~l~~~~~~~~~~ 497 (500)
T 3tcm_A 437 APDAFYALRLLESTGIVVVPGSGFGQVPGTWHFRCTILPQEDKIPAVISRFTVFHEAFMSE 497 (500)
T ss_dssp CHHHHHHHHHHHHHCEECEESTTTCCCTTCCBEEEESCSCTTTHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHH
Confidence 22445567888899999999999985 45899999988899999999999999887654
No 9
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=100.00 E-value=1.2e-48 Score=372.68 Aligned_cols=379 Identities=20% Similarity=0.363 Sum_probs=307.4
Q ss_pred chhhhhC--CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC---CCCCCCCCCCHH
Q 014769 14 KQEHKAA--PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FNCYATNSGIPP 88 (419)
Q Consensus 14 ~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~~Y~~~~g~~~ 88 (419)
+++.... .++.++.+.....+...+..++++|||+.|+|. +++++.+.+++.+.+.... ...|++..|..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~y~~~~g~~~ 80 (398)
T 3ele_A 5 NESMYQLGSVRSAIRELFEYGKKRAAIVGKENVYDFSIGNPS----IPAPQIVNDTIKELVTDYDSVALHGYTSAQGDVE 80 (398)
T ss_dssp CHHHHHHHHCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCC----SCCCHHHHHHHHHHHHHSCHHHHHSCCCTTCCHH
T ss_pred hHHHhccccCchhHHHHHHHHHHHHhhcCCCCeEEeecCCCC----CCCCHHHHHHHHHHHhcCCccccCCcCCCCCcHH
Confidence 3444443 567778776644332222246789999999754 5678999999999887642 457988899999
Q ss_pred HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (419)
+|+++++++.+.+|.++++++|++|+|+++++..++++++++| |+|++++|+|.++...++..|.+++.+++++ +++.
T Consensus 81 lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~-~~~~ 159 (398)
T 3ele_A 81 TRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYKVFVNAAGARLVEVPADT-EHFQ 159 (398)
T ss_dssp HHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHHHHHHHTTCEEEEECCCT-TTSS
T ss_pred HHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhHHHHHHcCCEEEEEecCC-cCCc
Confidence 9999999999988988899999999999999999999999999 9999999999999999999999999999864 3678
Q ss_pred cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh------CCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK------LRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~------~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
+|++.++++++++++++++++|+||||.++|.+++++|+++|++ +|+++|+||+|+.+.+++...+... ...
T Consensus 160 ~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~--~~~ 237 (398)
T 3ele_A 160 IDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIVYDGIKVPFVT--KYY 237 (398)
T ss_dssp CCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCBCTTCCCCCGG--GTC
T ss_pred CCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccccCCCCcCChH--hhc
Confidence 99999999998889999999999999999999999999999999 9999999999999988765443332 233
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
+++++++|+||.++++|+|+||++++++ +.....+...+..... .+.+++.+.|.++..+++... .++++
T Consensus 238 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~------~~~~~ 309 (398)
T 3ele_A 238 DNTLVCYSYSKSLSLPGERIGYVLVPDE--VYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGATG------DINAY 309 (398)
T ss_dssp SSEEEEEESTTTSSCTTTCCEEEECCTT--STTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCCC------CHHHH
T ss_pred CCeEEEEehhhcCCCccceeEEEEEcch--hhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCHH------HHHHH
Confidence 5789999999999889999999998753 2211124444443322 135667788888877776532 35677
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHH
Q 014769 320 RESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPS 399 (419)
Q Consensus 320 ~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~ 399 (419)
+++++.+.+.|+++ ++. +..|.+++++|++++.. +..++...+ .++||.+.||..|+.++++||+++.+++
T Consensus 310 ~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~------~~~~~~~~l-~~~gi~v~~g~~~~~~~~iRis~~~~~e 380 (398)
T 3ele_A 310 KENRDLLYEGLTRI-GYH-CFKPDGAFYMFVKALED------DSNAFCEKA-KEEDVLIVAADGFGCPGWVRISYCVDRE 380 (398)
T ss_dssp HHHHHHHHHHHHHH-TCC-EECCSBSSEEEEECSSS------CHHHHHHHH-HTTTEECEESGGGTCTTEEEEECCSCHH
T ss_pred HHHHHHHHHHHHHc-CCe-ecCCCeeEEEEEEcCCC------CHHHHHHHH-HHCCEEEeCccccCCCCeEEEEecCCHH
Confidence 88888888888877 777 44788999999998742 466777655 7789999999999888999999998999
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014769 400 ALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~~ 416 (419)
+|++++++|++++++++
T Consensus 381 ~i~~~l~~l~~~l~~~~ 397 (398)
T 3ele_A 381 MIKHSMPAFEKIYKKYN 397 (398)
T ss_dssp HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999998875
No 10
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.4e-48 Score=372.28 Aligned_cols=380 Identities=20% Similarity=0.320 Sum_probs=304.0
Q ss_pred hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
...+...+..+.. ..+.+. ..|+++|||+.|.+. ++.++.+.+++.+++.......|++..|..++|+++++++
T Consensus 15 ~~~~~~~~~~~~~-~~~~~~-~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~ 88 (412)
T 2x5d_A 15 DRLPPYVFNITAE-LKMAAR-RRGEDIIDLSMGNPD----GPTPPHIVEKLCTVAQREDTHGYSTSRGIPRLRRAISHWY 88 (412)
T ss_dssp ------CHHHHHH-HHHHHH-HTTCCCEECSSCCCC----SCCCHHHHHHHHHTC---------CTTCCHHHHHHHHHHH
T ss_pred hhcCchHHHHHHH-HHHHHh-hcCCCEEecCCCCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHH
Confidence 3334444555443 223232 347889999999863 4567899999988876543457988889999999999999
Q ss_pred HhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHh
Q 014769 98 SRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 98 ~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
.+.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|+++...++..|.+++.++++++.++.+|++.++++
T Consensus 89 ~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~ 168 (412)
T 2x5d_A 89 RDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIYGAVIAGAQVRSVPLVPGIDFFNELERAIRE 168 (412)
T ss_dssp HHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHHTCEEEEEECSTTSCHHHHHHHHHHT
T ss_pred HHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeecCCccCCCCCHHHHHHh
Confidence 8877877788 799999999999999999999999999999999999999999999999999987554666889999999
Q ss_pred hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCC
Q 014769 177 ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWL 255 (419)
Q Consensus 177 ~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~ 255 (419)
+++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++
T Consensus 169 i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~ 248 (412)
T 2x5d_A 169 SIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWKAPSIMQVPGAKDIAVEFFTLSKSYN 248 (412)
T ss_dssp EESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTGGGTEEEEEECC-CCS
T ss_pred cccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCChhhccCccCcEEEEecCccccC
Confidence 9888899999999999999999999999999999999999999999999887655445555533 457899999999998
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
++|+|+||+++++ ++++.+..... .+++++.+.|.++..+|+.. .+++++.+++++++++.+.+.|+++
T Consensus 249 ~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~- 318 (412)
T 2x5d_A 249 MAGWRIGFMVGNP--------ELVSALARIKSYHDYGTFTPLQVAAIAALEGD-QQCVRDIARQYQQRRDVLVKGLREA- 318 (412)
T ss_dssp CTTSCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSC-SHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CcccceEEEEcCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHC-
Confidence 8999999999864 57777776543 35678899999999998754 4678889999999999999999987
Q ss_pred CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
++. +..|.+|+|+|++++... . ..+..++...|++++||.+.||..|+. .+++||+++.+++++++++++|++++
T Consensus 319 g~~-~~~~~~g~~~~~~~~~~~-~-~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~~~l~~~l~~l~~~l 395 (412)
T 2x5d_A 319 GWM-VENPKASMYVWAKIPEPY-A-HLGSLEFAKKLLQDAKVSVSPGIGFGDYGDDHVRFALIENRDRLRQAVRGIKAMF 395 (412)
T ss_dssp TCC-CCCCSBSSEEEEECCTTT-G-GGCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred CCE-ecCCCeeeEEEEEcCCcc-C-CCCHHHHHHHHHHHCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHH
Confidence 777 447788999999986310 0 014677888887778999999998863 68999999889999999999999999
Q ss_pred HHHh
Q 014769 413 QRHT 416 (419)
Q Consensus 413 ~~~~ 416 (419)
+++.
T Consensus 396 ~~~~ 399 (412)
T 2x5d_A 396 RADG 399 (412)
T ss_dssp HHTT
T ss_pred HhcC
Confidence 8753
No 11
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=100.00 E-value=1.3e-48 Score=372.14 Aligned_cols=370 Identities=21% Similarity=0.329 Sum_probs=309.5
Q ss_pred hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (419)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (419)
+....++..+..+.. ..+.+...+++++|||+.|++. ++.++.+.+++.+.+. ....|+++.|..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~-~~~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~ 77 (396)
T 3jtx_A 5 LLKQLKPYPFARLHE-AMQGISAPEGMEAVPLHIGEPK----HPTPKVITDALTASLH--ELEKYPLTAGLPELRQACAN 77 (396)
T ss_dssp HHHHCCSCHHHHHHH-HTTTCCCCTTCCCEECSCCSCC----SCCCHHHHHHHHHTGG--GGGSCCCTTCCHHHHHHHHH
T ss_pred hhccCCCChHHHHHH-HHHhhhhccCCCeEEeCCcCCC----CCCCHHHHHHHHHHhh--hccCCCCCCCcHHHHHHHHH
Confidence 344555566666543 4454544568999999999853 5678999999998875 34589998899999999999
Q ss_pred HHHhhCCCC-CCCC-cEEEcccHHHHHHHHHHHhcCCC-----CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769 96 YLSRDLPYK-LSAD-DVYVTLGCKQAVEVILSVLARPG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (419)
Q Consensus 96 ~l~~~~~~~-~~~~-~i~~t~g~~~al~~~~~~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (419)
++.+.+|.. ++++ +|++|+|+++++..++++++++| |+|+++.|+|.++...++..|.+++.+++ .++++.+
T Consensus 78 ~l~~~~g~~~~~~~~~i~~t~g~~~al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~~~~~~~g~~~~~v~~-~~~g~~~ 156 (396)
T 3jtx_A 78 WLKRRYDGLTVDADNEILPVLGSREALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYEGATLLGGGEIHFANC-PAPSFNP 156 (396)
T ss_dssp HHHHHTTTCCCCTTTSEEEESSHHHHHHHHHHHHCCC---CCCCEEEEEESCCHHHHHHHHHTTCEEEEEEC-CTTTCCC
T ss_pred HHHHhcCCCCCCCCCeEEEcCCcHHHHHHHHHHHhCCCCccCCCEEEEcCCCcHhHHHHHHHcCCEEEEeec-CCCCCcc
Confidence 999988877 7888 99999999999999999999997 79999999999999999999999999998 4556788
Q ss_pred ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc----cC-CCCc
Q 014769 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL----FG-SIVP 243 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~----~~-~~~~ 243 (419)
|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++..+.+... ++ ..++
T Consensus 157 d~~~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (396)
T 3jtx_A 157 DWRSISEEVWKRTKLVFVCSPNNPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQK 236 (396)
T ss_dssp CGGGSCHHHHHTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTT
T ss_pred CHHHHHHhhccCcEEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCc
Confidence 999999988878999999999999999999999999999999999999999999999887633222211 11 2457
Q ss_pred EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769 244 VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (419)
++++.|+||.|+++|+|+||++++. ++++.+..... .+++++.+.|.++..+++. .+++++.+++++++
T Consensus 237 ~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~ 306 (396)
T 3jtx_A 237 LLMFTSLSKRSNVPGLRSGFVAGDA--------ELLKNFLLYRTYHGSAMSIPVQRASIAAWDD--EQHVIDNRRLYQEK 306 (396)
T ss_dssp EEEEEESTTTSSCGGGCCEEEEECH--------HHHHHHHHHHHHHTCCCCHHHHHHHHHHHHC--CHHHHHHHHHHHHH
T ss_pred EEEEeccccccCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHH
Confidence 8999999999899999999998864 67777776643 3567899999999988875 57889999999999
Q ss_pred HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--------CCeEEEEe
Q 014769 323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--------KNWLRIAF 394 (419)
Q Consensus 323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--------~~~~Ris~ 394 (419)
++.+.+.|+++ +. +..|.+|+|+|++++. .+..++..+|++++||.+.||..|+. .+++||++
T Consensus 307 ~~~l~~~l~~~--~~-~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~~~~~iRis~ 377 (396)
T 3jtx_A 307 FERVIPILQQV--FD-VKLPDASFYIWLKVPD------GDDLAFARNLWQKAAIQVLPGRFLARDTEQGNPGEGYVRIAL 377 (396)
T ss_dssp HHHHHHHHTTT--SC-CCCCSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCCCCTTCCTTTTEEEEEC
T ss_pred HHHHHHHHHhc--CC-ccCCCeeEEEEEECCC------CCHHHHHHHHHHHCCEEEeCChHhCCcccccCCCCCeEEEEE
Confidence 99999999875 33 3478889999999874 25778888888888999999998874 48999999
Q ss_pred ecCHHHHHHHHHHHHHHH
Q 014769 395 CAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~ 412 (419)
+.+++++++++++|++++
T Consensus 378 ~~~~~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 378 VADVATCVKAAEDIVSLY 395 (396)
T ss_dssp CSCHHHHHHHHHHHHHHC
T ss_pred cCCHHHHHHHHHHHHHHh
Confidence 889999999999998865
No 12
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=100.00 E-value=6.4e-48 Score=366.60 Aligned_cols=377 Identities=23% Similarity=0.382 Sum_probs=314.7
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++....+.+.+..+.....+ .+++|+|+.|.+. +++++.+.+++.+.+.... ..|++..|..++|+++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~~l 72 (389)
T 1gd9_A 4 SDRLELVSASEIRKLFDIAAG------MKDVISLGIGEPD----FDTPQHIKEYAKEALDKGL-THYGPNIGLLELREAI 72 (389)
T ss_dssp HHHHHHSCCCHHHHHHHHHHT------CSSCEECCCCSCS----SCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHHHH
T ss_pred hhHhHhCChhHHHHHHHHHhh------hcCeEecCCCCCC----CCCCHHHHHHHHHHHhCCC-CCCCCCCCcHHHHHHH
Confidence 345556667777777764321 2578999999863 4567899999999887643 4798888999999999
Q ss_pred HHHHHhhCCCCCCCCc-EEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 94 ADYLSRDLPYKLSADD-VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~-i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
++++.+.+|..+++++ |++|+|+++++..++.+++++||+|++++|+|+++...+...|.+++.+++++++++.+|++.
T Consensus 73 a~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 152 (389)
T 1gd9_A 73 AEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAPAVILAGGKPVEVPTYEEDEFRLNVDE 152 (389)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHHHHHHHTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCCccCCCCCHHH
Confidence 9999887787788899 999999999999999999999999999999999999999999999999998654467789999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCC
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS 251 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~s 251 (419)
++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+|
T Consensus 153 l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 232 (389)
T 1gd9_A 153 LKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARHYSIASLDGMFERTITVNGFS 232 (389)
T ss_dssp HHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEST
T ss_pred HHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCCCCHhhccCCCCCEEEEecCh
Confidence 99999878889999999999999999999999999999999999999999999887653445545432 45789999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 329 (419)
|.++++|+|+||+++++ ++++.++.... .+++++.+.|.++..+|+... ..++++.+++++++++.+.+.
T Consensus 233 K~~~~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 304 (389)
T 1gd9_A 233 KTFAMTGWRLGFVAAPS--------WIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEMRKEYDRRRKLVWKR 304 (389)
T ss_dssp TTTTCGGGCCEEEECCH--------HHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccceEEEEECH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99988999999999864 57777776543 346778899999988887632 127888899999999999999
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~ 407 (419)
|+++ ++. +..|.+|+++|++++... .+..++...|++++||.+.||..|+. .+++|++++.+++++++++++
T Consensus 305 L~~~-g~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~ 378 (389)
T 1gd9_A 305 LNEM-GLP-TVKPKGAFYIFPRIRDTG----LTSKKFSELMLKEARVAVVPGSAFGKAGEGYVRISYATAYEKLEEAMDR 378 (389)
T ss_dssp HHHT-TCC-CCCCCBTTEECCBCGGGT----CCHHHHHHHHHHHTCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHHH
T ss_pred HHHc-CCe-ecCCCeeeEEEEeccCCC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEecCCHHHHHHHHHH
Confidence 9988 777 447888999998886311 25677888886688999999998864 689999998899999999999
Q ss_pred HHHHHHHH
Q 014769 408 MKAFCQRH 415 (419)
Q Consensus 408 l~~~~~~~ 415 (419)
|++++++.
T Consensus 379 l~~~~~~~ 386 (389)
T 1gd9_A 379 MERVLKER 386 (389)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 99998763
No 13
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=5.4e-48 Score=366.96 Aligned_cols=372 Identities=25% Similarity=0.390 Sum_probs=312.0
Q ss_pred CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (419)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (419)
+..+....+.+.++.+.....+.. + .++++|+|+.|.+. ++.++.+.+++.+.+.... ..|++..|..++|++
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~-~-~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~lr~~ 86 (389)
T 1o4s_A 14 VSRRISEIPISKTMELDAKAKALI-K-KGEDVINLTAGEPD----FPTPEPVVEEAVRFLQKGE-VKYTDPRGIYELREG 86 (389)
T ss_dssp CCHHHHHSCCCSSHHHHHHHHHHH-H-TTCCCEECCCSSCS----SCCCHHHHHHHHHHHTTCC-CCCCCTTCCHHHHHH
T ss_pred HHHHHhhcCccHHHHHHHHHHHHH-h-cCCCEEEccCCCCC----CCCCHHHHHHHHHHHhcCC-CCCCCCCCCHHHHHH
Confidence 345566777777888776544332 2 47889999999863 4557899999999886543 479888899999999
Q ss_pred HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
+++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+++++++++.+|+++
T Consensus 87 la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~ 166 (389)
T 1o4s_A 87 IAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYIPQIILAGGTVNVVETFMSKNFQPSLEE 166 (389)
T ss_dssp HHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCGGGTTCCCHHH
T ss_pred HHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEecCCccCCCCCHHH
Confidence 99999887787778899999999999999999999999999999999999999999999999999998654567899999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCC
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSIS 251 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~s 251 (419)
|+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..+.. .++++++.|+|
T Consensus 167 l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g-~~~~~~~~~~~~~~~i~~~s~s 245 (389)
T 1o4s_A 167 VEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTD-EFTSILDVSEGFDRIVYINGFS 245 (389)
T ss_dssp HHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSS-CCCCHHHHCSSSTTEEEEEEST
T ss_pred HHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCC-CCCCHhhcCCCCCcEEEEeech
Confidence 999998888899999999999999999999999999999999999999999988765 2334444432 35689999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
|.++++|+|+||+++++ ++++.+..... .+++++.+.|.++..+|+.. +++.+++++++++.+.+.|
T Consensus 246 K~~~~~G~r~G~l~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~----~~~~~~~~~~~~~~l~~~L 313 (389)
T 1o4s_A 246 KSHSMTGWRVGYLISSE--------KVATAVSKIQSHTTSCINTVAQYAALKALEVD----NSYMVQTFKERKNFVVERL 313 (389)
T ss_dssp TTTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCC----CHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccceEEEEeCH--------HHHHHHHHHhhhcccCCCHHHHHHHHHHHhcc----HHHHHHHHHHHHHHHHHHH
Confidence 99988999999999864 57777776543 34667888898888888763 6777888999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
+++ ++. +..|.+++++|++++ .+..++..+|++++||.+.||..|+.++++|++++.++++|++++++|.+
T Consensus 314 ~~~-g~~-~~~~~~~~~~~~~~~-------~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~Ris~~~~~~~l~~~l~~l~~ 384 (389)
T 1o4s_A 314 KKM-GVK-FVEPEGAFYLFFKVR-------GDDVKFCERLLEEKKVALVPGSAFLKPGFVRLSFATSIERLTEALDRIED 384 (389)
T ss_dssp HHT-TCC-CCCCSBSSEEEEECS-------SCHHHHHHHHHHHHCEECEEGGGGTCTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred Hhc-CCe-eecCCcceEEEEeCC-------CCHHHHHHHHHHHCCEEEeCchhcCCCCeEEEEEeCCHHHHHHHHHHHHH
Confidence 988 777 446888999999886 14678888887678999999998887789999998899999999999998
Q ss_pred HHH
Q 014769 411 FCQ 413 (419)
Q Consensus 411 ~~~ 413 (419)
+++
T Consensus 385 ~l~ 387 (389)
T 1o4s_A 385 FLN 387 (389)
T ss_dssp HHT
T ss_pred HHh
Confidence 874
No 14
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.1e-48 Score=381.76 Aligned_cols=386 Identities=21% Similarity=0.336 Sum_probs=295.5
Q ss_pred HHHHHHHHHHhhhcCCCC-----CeeeccCCCCCCCCCCC---------------------ChHHHHHHHHHHHhCC---
Q 014769 25 VKTSLASIIDSVNKNDPR-----PVVPLGYGDPTAFPCFR---------------------TAVEAEDAIVDAVRSG--- 75 (419)
Q Consensus 25 i~~~~~~~~~~~~~~~~~-----~~i~l~~g~~~~~~~~~---------------------~~~~v~~a~~~~~~~~--- 75 (419)
|-..++++.+++. .|. ++|.+++|+|......| .|..+.+++.+++...
T Consensus 43 ~~~~a~~~~~~~~--~g~~~~f~~~i~~nig~p~~~~~~~~~~~r~~l~l~~~p~~~~~~~~P~~~~~~~~~~l~~~~~~ 120 (498)
T 3ihj_A 43 IVLKAGEIELELQ--RGIKKPFTEVIRANIGDAQAMGQQPITFLRQVMALCTYPNLLDSPSFPEDAKKRARRILQACGGN 120 (498)
T ss_dssp HHHHHHHHHHHHH--TTCCCSSSSCBCCC----------CCHHHHHHHHHHHCGGGGGCSSSCHHHHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHh--ccCCCchhhhhhcCCcCcccccCCcchHHHHHHHHhcCccccCcccCCHHHHHHHHHHHHhccCC
Confidence 3344445544443 244 89999999986542211 1334445556666542
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHhhC-CCCCCCCcEEEcccHHHHHHHHHHHhcCCCC----eEEeeCCCCCCcHHHHhh
Q 014769 76 KFNCYATNSGIPPARRAIADYLSRDL-PYKLSADDVYVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQR 150 (419)
Q Consensus 76 ~~~~Y~~~~g~~~lr~~ia~~l~~~~-~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd----~vlv~~p~~~~~~~~~~~ 150 (419)
....|+++.|..++|++|++++.+.+ |+.+++++|++|+|+++++..++++++++|| .|+++.|+|+.+...+..
T Consensus 121 ~~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~~~~~~ 200 (498)
T 3ihj_A 121 SLGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYSAVISE 200 (498)
T ss_dssp -------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHHHHHHH
Confidence 34689999999999999999999888 4888999999999999999999999998875 999999999999999999
Q ss_pred cCCEEEEEeccCCCCcccChHHHHHhhcC-----CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769 151 KQVEVRHFDLLPERNWEVDLDAVEALADK-----NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL 225 (419)
Q Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~ 225 (419)
.|..++.++++++++|.+|+++|++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+
T Consensus 201 ~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y~~~ 280 (498)
T 3ihj_A 201 LDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVYQDN 280 (498)
T ss_dssp TTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTC
T ss_pred cCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCcccc
Confidence 99999999998877899999999998876 5789999999999999999999999999999999999999999999
Q ss_pred ccCCC-CCCCccccC--------CCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchH
Q 014769 226 TFGSI-PYTPMGLFG--------SIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTF 295 (419)
Q Consensus 226 ~~~~~-~~~~~~~~~--------~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 295 (419)
.|++. .+.++..+. ...++++++||||.| |++|+|+||+++... ++++++.+........+++.+
T Consensus 281 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~-----~~~l~~~l~~~~~~~~~~~~~ 355 (498)
T 3ihj_A 281 VYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINL-----HPEIKGQLVKLLSVRLCPPVS 355 (498)
T ss_dssp BCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESC-----CHHHHHHHHHHHHHSCCCCHH
T ss_pred ccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecC-----CHHHHHHHHHHHhccCCCCHH
Confidence 98754 444544321 233589999999998 779999999984211 026778777766556778899
Q ss_pred HHHHHHHHHccc-----c-h---HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc-------ccC
Q 014769 296 IQGAIPQILEKT-----K-E---DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL-------LED 359 (419)
Q Consensus 296 ~~~a~~~~l~~~-----~-~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~-------~~~ 359 (419)
.|.++..++... . . ....+.+++++++++.+.+.|+++|++. +..|++|+|+|++++... ..+
T Consensus 356 ~q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~g~~-~~~p~gg~~~~~~l~~p~~~~~~~~~~g 434 (498)
T 3ihj_A 356 GQAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVPGIH-CNPLQGAMYAFPRIFIPAKAVEAAQAHQ 434 (498)
T ss_dssp HHHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEE-CCCCCBSSEECCEECCCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcE-ecCCCeEEEEEEeccCchhhhHHHHhcC
Confidence 999998888631 1 1 2345677889999999999999988988 448999999998764210 002
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
..++..++.++++++||.+.||+.|+. ..++|++++.+++++++++++|++++++++++
T Consensus 435 ~~~~~~~~~~ll~~~gI~v~pG~~f~~~~~~~~~Ris~~~~~e~l~~~i~~L~~~~~~~~~~ 496 (498)
T 3ihj_A 435 MAPDMFYCMKLLEETGICVVPGSGFGQREGTYHFRMTILPPVEKLKTVLQKVKDFHINFLEK 496 (498)
T ss_dssp SCHHHHHHHHHHHHHCBCCEEGGGTCCCTTCCBEEEECCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHCCEEEEeCcccCCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 222333377888889999999999984 46999999989999999999999999998765
No 15
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-49 Score=380.94 Aligned_cols=356 Identities=24% Similarity=0.377 Sum_probs=301.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.++++|||+.|.|. +++++.+.+++.+++.......|++..|..++|+++++++.+.+|.++++++|++|+|++++
T Consensus 55 ~~~~~i~l~~g~~~----~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~a 130 (447)
T 3b46_A 55 QGRELINLGQGFFS----YSPPQFAIKEAQKALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEG 130 (447)
T ss_dssp TTSCCEECCCCSCS----SCCCHHHHHHHHHHTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHH
T ss_pred cCCCeEEccCCCCC----CCCCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHH
Confidence 46789999999863 45679999999998875334589998899999999999999888888888999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC----------CcccChHHHHHhhcCCccEEEEeCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER----------NWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~----------~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
+..++++++++||+|++++|+|+++...++..|.+++.+++++++ ++.+|++.|++++++++++|++++|
T Consensus 131 l~~~~~~l~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p 210 (447)
T 3b46_A 131 ILSCLMGLLNAGDEVIVFEPFFDQYIPNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIINTP 210 (447)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEESS
T ss_pred HHHHHHHHcCCCCEEEEeCCCchhHHHHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEeCC
Confidence 999999999999999999999999999999999999999886543 5789999999999888899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc--CCCCcEEEEecCCCcCCCCCceeEEEEe-
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF--GSIVPVITLGSISKRWLVPGWRFGWLVT- 266 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~--~~~~~~i~~~s~sK~~~~~G~r~G~~~~- 266 (419)
+||||.++|.+++++|+++|+++|+++|+||+|..+.+++ ...++..+ +..++++++.|+||.++++|+|+||+++
T Consensus 211 ~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g-~~~~~~~~~~~~~~~~i~i~S~sK~~~~~G~riG~~~~~ 289 (447)
T 3b46_A 211 HNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTD-SFTRIATLSPEIGQLTLTVGSAGKSFAATGWRIGWVLSL 289 (447)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSS-CCCCGGGSCHHHHTTEEEEEEHHHHTTCTTSCCEEEECS
T ss_pred CCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCC-CCcCHHHcCCCCCCcEEEEecCchhcCCcchhhEEEEeC
Confidence 9999999999999999999999999999999999998876 33344444 1235789999999999889999999998
Q ss_pred eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 267 NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+. ++++.+.... ...++++++.|.++.++|+... .+++++.+++++++++.+.+.|+++ ++. +..|.+
T Consensus 290 ~~--------~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 359 (447)
T 3b46_A 290 NA--------ELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDEL-GLP-YTAPEG 359 (447)
T ss_dssp CH--------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHH-TCC-EECCSB
T ss_pred CH--------HHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCe
Confidence 54 5777777653 3356778889999888887632 4678889999999999999999987 777 447889
Q ss_pred eEEEEeecCcccccC----------CCCHHHHHHHHHHhcCeEeecCCCCCC-------CCeEEEEeecCHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLED----------INDDIEFALKLAKEESVIVTPGIYVGL-------KNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 345 g~~~~~~~~~~~~~~----------~~~~~~~~~~ll~~~gv~v~~g~~~~~-------~~~~Ris~~~~~~~l~~~l~~ 407 (419)
|+|+|++++....+. ..++.+++.+|++++||.+.||+.|+. .+++||+++.++++|++++++
T Consensus 360 g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~~~~iRls~~~~~e~l~~~~~~ 439 (447)
T 3b46_A 360 TYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTEFYIKEHEKAAENLLRFAVCKDDAYLENAVER 439 (447)
T ss_dssp SSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGGGSCGGGGGGGTTEEEEECCSCHHHHHHHHHH
T ss_pred eEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchHhCCCCccCCCCCEEEEEEeCCHHHHHHHHHH
Confidence 999999987421100 124567888887788999999988864 589999998899999999999
Q ss_pred HHH
Q 014769 408 MKA 410 (419)
Q Consensus 408 l~~ 410 (419)
|++
T Consensus 440 l~~ 442 (447)
T 3b46_A 440 LKL 442 (447)
T ss_dssp GGG
T ss_pred HHH
Confidence 987
No 16
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=100.00 E-value=2.2e-48 Score=372.38 Aligned_cols=373 Identities=20% Similarity=0.313 Sum_probs=312.6
Q ss_pred hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (419)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (419)
+....+++.++.+.. ...+.++|+|+.|+| .+++++.+.+++.+++.......|++..|..++|+++++
T Consensus 4 ~~~~~~~~~~~~~~~-------~~~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~la~ 72 (410)
T 3e2y_A 4 RIEGLDSNVWVEFTK-------LAADPSVVNLGQGFP----DISPPSYVKEELSKAAFIDNMNQYTRGFGHPALVKALSC 72 (410)
T ss_dssp GGTTCCCCHHHHTTT-------TTTSTTSEECSSCCC----CSCCCHHHHHHHHHHHTCGGGGSCCCTTCCHHHHHHHHH
T ss_pred hhccCCccHHHHHHH-------HhcCCCeEEecCCCC----CCCCCHHHHHHHHHHHhCccccCCCCCCChHHHHHHHHH
Confidence 344455555655543 123678999999985 367789999999999876555689998899999999999
Q ss_pred HHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC---------CCC
Q 014769 96 YLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP---------ERN 165 (419)
Q Consensus 96 ~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---------~~~ 165 (419)
++.+.+|..+++ ++|++|+|+++++..++.+++++||+|+++.|+|..+...+...|.+++.+++++ ..+
T Consensus 73 ~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~ 152 (410)
T 3e2y_A 73 LYGKIYQRQIDPNEEILVAVGAYGSLFNSIQGLVDPGDEVIIMVPFYDCYEPMVRMAGAVPVFIPLRSKPTDGMKWTSSD 152 (410)
T ss_dssp HHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEECCCCSSCCBGGG
T ss_pred HHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhHHHHHHcCCEEEEEeccccccccccccccC
Confidence 999888888888 8999999999999999999999999999999999999999999999999998763 245
Q ss_pred cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcE
Q 014769 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPV 244 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~ 244 (419)
+.+|++.+++++++++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+. ..+++
T Consensus 153 ~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (410)
T 3e2y_A 153 WTFDPRELESKFSSKTKAIILNTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERT 232 (410)
T ss_dssp EECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGE
T ss_pred CcCCHHHHHhhcCCCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeE
Confidence 67899999999988899999999999999999999999999999999999999999999998876655555554 34578
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc------cchHHHHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK------TKEDFFCKLID 317 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~------~~~~~~~~~~~ 317 (419)
+++.|+||.++++|+|+||+++++ ++++.++.... .+++++++.|.++..+++. ...+++++.++
T Consensus 233 i~~~S~sK~~g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 304 (410)
T 3e2y_A 233 ITIGSAGKTFSVTGWKLGWSIGPA--------HLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPK 304 (410)
T ss_dssp EEEEEHHHHSSCGGGCCEEEECCH--------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHH
T ss_pred EEEecchhhcCCCCceEEEEEECH--------HHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHH
Confidence 999999999989999999999865 57777776543 3567888999999888873 22567889999
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCC-------CCHHHHHHHHHHhcCeEeecCCCCCC----
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDI-------NDDIEFALKLAKEESVIVTPGIYVGL---- 386 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~-------~~~~~~~~~ll~~~gv~v~~g~~~~~---- 386 (419)
+++++++.+.+.|+++ ++. +..|++|+|+|++++.... +. .++.+++.++++++||.+.||+.|+.
T Consensus 305 ~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~ 381 (410)
T 3e2y_A 305 ELEVKRDRMVRLLNSV-GLK-PIVPDGGYFIIADVSSLGA-DLSDMNSDEPYDYKFVKWMTKHKKLTAIPVSAFCDSKSK 381 (410)
T ss_dssp HHHHHHHHHHHHHHTT-TCE-EEBCSBSSEEEEECGGGCC-CCTTCCSSCCHHHHHHHHHHHHHSEECEEGGGGSCTTTH
T ss_pred HHHHHHHHHHHHHHHC-CCe-ecCCCccEEEEEEchhhhc-ccccccccccCHHHHHHHHHHHcCEEEeCchhhCCCCCC
Confidence 9999999999999988 777 4578999999998864211 01 11357888888889999999998864
Q ss_pred ---CCeEEEEeecCHHHHHHHHHHHHH
Q 014769 387 ---KNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 387 ---~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
.+++||+++.++++|++++++|++
T Consensus 382 ~~~~~~iRis~~~~~e~l~~~l~~l~~ 408 (410)
T 3e2y_A 382 PHFEKLVRFCFIKKDSTLDAAEEIFRA 408 (410)
T ss_dssp HHHTTEEEEECCCCHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEEcCCHHHHHHHHHHHHh
Confidence 589999998899999999999975
No 17
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=100.00 E-value=1.1e-48 Score=373.42 Aligned_cols=376 Identities=20% Similarity=0.293 Sum_probs=306.7
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++....++..+..+.... . +..+.++|||+.|.+. ++.++.+.+++.+++.......|+++.|..++|+++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~-~---~~~g~~~idl~~g~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~i 94 (404)
T 2o1b_A 23 SNKLANIPDSYFGKTMGRK-I---EHGPLPLINMAVGIPD----GPTPQGIIDHFQKALTIPENQKYGAFHGKEAFKQAI 94 (404)
T ss_dssp CHHHHTSCCCTTC-----------CCCSSCCEECCCCSCS----SCCCHHHHHHHHHHTTCHHHHSCCCTTCCHHHHHHH
T ss_pred hhHhhhCCchHHHHHHHHH-H---hcCCCCEEecCCcCCC----CCCCHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Confidence 4445555555555444322 1 1346779999999863 446789999999887543234788878999999999
Q ss_pred HHHHHhhCCCCCCC-CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 94 ADYLSRDLPYKLSA-DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 94 a~~l~~~~~~~~~~-~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
++++.+.+|..+++ ++|++|+|+++++..++++++++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++.
T Consensus 95 a~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~ 173 (404)
T 2o1b_A 95 VDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLAGVLLADGKPVPLNLEP-PHYLPDWSK 173 (404)
T ss_dssp HHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHHHHHHTTCEEEEEECCT-TTCCCCGGG
T ss_pred HHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHCCCEEEEeccCc-ccCcCCHHH
Confidence 99998877877777 7999999999999999999999999999999999999999999999999998865 456789999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCC
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSIS 251 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~s 251 (419)
|++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.|+|
T Consensus 174 l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~s 252 (404)
T 2o1b_A 174 VDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAK-NPSILASENGKDVAIEIYSLS 252 (404)
T ss_dssp SCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSC-CCCGGGSTTHHHHEEEEEEST
T ss_pred HHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCC-CCChhhcCCCCCCEEEEEecc
Confidence 9888876788999999999999999999999999999999999999999999888653 33333332 234689999999
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHh
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l 330 (419)
|.++++|+|+||+++++ ++++.++.... .+++++.+.|.++.++|+.. .+++++.+++++++++.+.+.|
T Consensus 253 K~~g~~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L 323 (404)
T 2o1b_A 253 KGYNMSGFRVGFAVGNK--------DMIQALKKYQTHTNAGMFGALQDAAIYALNHY-DDFLEEQSNVFKTRRDRFEAML 323 (404)
T ss_dssp TTTTCGGGCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCchhheEeEecCH--------HHHHHHHHHHhhccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHH
Confidence 99988999999999854 57777776543 34678899999999988764 5788899999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRM 408 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l 408 (419)
+++ ++. +..|.+|+|+|++++.. .+..+++.++++++||.+.||..|+. ++++||+++.+++++++++++|
T Consensus 324 ~~~-g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRis~~~~~e~l~~~l~~l 396 (404)
T 2o1b_A 324 AKA-DLP-FVHAKGGIYVWLETPPG-----YDSEQFEQFLVQEKSILVAPGKPFGENGNRYVRISLALDDQKLDEAAIRL 396 (404)
T ss_dssp HHT-TCC-EECCCBSSEEEEECCTT-----CCHHHHHHHHHHHHCEECEESGGGCGGGTTEEEEECCSCTTHHHHHHHHH
T ss_pred Hhc-CCe-ecCCCcceEEEEeCCCC-----CCHHHHHHHHHHHCCEEEeCchhhCcCCCCeEEEEEcCCHHHHHHHHHHH
Confidence 988 777 44778899999998742 24677888887778999999998874 6899999987889999999999
Q ss_pred HHHHHHH
Q 014769 409 KAFCQRH 415 (419)
Q Consensus 409 ~~~~~~~ 415 (419)
+++++++
T Consensus 397 ~~~l~~~ 403 (404)
T 2o1b_A 397 TELAYLY 403 (404)
T ss_dssp HGGGGGG
T ss_pred HHHHHhh
Confidence 9888764
No 18
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=100.00 E-value=3.1e-48 Score=370.92 Aligned_cols=357 Identities=19% Similarity=0.258 Sum_probs=306.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-CcEEEcccHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-DDVYVTLGCKQAVE 121 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~t~g~~~al~ 121 (419)
.+|||+.|++. .+++++.+++++.+++.......|++..|..++++++++++.+.+|..+++ ++|++|+|+++++.
T Consensus 40 ~~id~~~g~~~---~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a~~ 116 (407)
T 3nra_A 40 RPVDFSHGDVD---AHEPTPGAFDLFSAGVQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGALF 116 (407)
T ss_dssp CCEETTSCCTT---TSCCCTTHHHHHHHHHHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHH
T ss_pred ceeeecCcCCC---CCCCcHHHHHHHHHHHhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHH
Confidence 48999999875 256789999999998875444478888899999999999999988887767 79999999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC----CCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP----ERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
.++.+++++||+|+++.|+|.++...++..|.+++.+++++ +.++.+|++.++++++++++++++++|+||||.++
T Consensus 117 ~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~ 196 (407)
T 3nra_A 117 LAVAATVARGDKVAIVQPDYFANRKLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNNPAGVVY 196 (407)
T ss_dssp HHHHTTCCTTCEEEEEESCCTHHHHHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCTTTCCCC
T ss_pred HHHHHhCCCCCEEEEcCCcccchHHHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCCCCCccc
Confidence 99999999999999999999999999999999999998743 35678999999999988889999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC--CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG--SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
|.+++++|+++|+++|+++|+||+|+.+.+++....++..++ ..++++++.|+||.++++|+|+||++++.
T Consensus 197 ~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------- 269 (407)
T 3nra_A 197 SAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTESLSGYRLGVAFGSR------- 269 (407)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTTCCGGGCCEEEEECH-------
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCcccccCCCeeeEEEEEcCH-------
Confidence 999999999999999999999999999998877666665553 35578999999999989999999999864
Q ss_pred hhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 276 SGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 276 ~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++++.++... ....+++++.+.++..+++.. .+++++.+++++++++.+.+.|++++++. +..|.+|+|+|+.++.
T Consensus 270 -~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~~~~~~~~~~~~~~~~ 346 (407)
T 3nra_A 270 -AIIARMEKLQAIVSLRAAGYSQAVLRGWFDEA-PGWMEDRIARHQAIRDELLHVLRGCEGVF-ARTPQAGSYLFPRLPK 346 (407)
T ss_dssp -HHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCC-TTHHHHHHHHHHHHHHHHHHHHHTSTTCB-CCCCSBSSEECCBCCC
T ss_pred -HHHHHHHHHHhhhccCCChHHHHHHHHHHhcc-chHHHHHHHHHHHHHHHHHHHHhcCCCce-eccCCeeEEEEEeCCC
Confidence 6777777664 334566788888888887642 46788888999999999999999988888 4478888999998875
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.. .+..++...|++++||.+.||..|+. .+++||+++.++++|++++++|++++++++
T Consensus 347 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~~~~l~~~~~~~~ 406 (407)
T 3nra_A 347 LA----VAPAEFVKILRLQAGVVVTPGTEFSPHTADSVRLNFSQDHEAAVAAARRIVTLVERYR 406 (407)
T ss_dssp BS----SCHHHHHHHHHHHHCEECEEGGGTCTTCTTBEEEECCSCHHHHHHHHHHHHHHHHHHB
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEeCCCHHHHHHHHHHHHHHHHHhh
Confidence 21 25678888887778999999998873 689999998899999999999999998865
No 19
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=100.00 E-value=4.3e-48 Score=369.83 Aligned_cols=390 Identities=25% Similarity=0.448 Sum_probs=312.3
Q ss_pred cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHH
Q 014769 12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARR 91 (419)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~ 91 (419)
.++++.++...+.+..+. ..+.+.+ .++++|+|+.|.|... .++.++.+.+++.+.+.... ..|++..|..++|+
T Consensus 11 ~~~~~~~~~~~~~~~~~~--~~~~~~~-~g~~~i~l~~~~~~~~-~~~~~~~v~~a~~~~~~~~~-~~y~~~~g~~~l~~ 85 (406)
T 1xi9_A 11 RASKRALSVEYAIRDVVL--PARELEK-KGIKVIRLNIGDPVKF-DFQPPEHMKEAYCKAIKEGH-NYYGDSEGLPELRK 85 (406)
T ss_dssp CCCHHHHTCCC---------CHHHHHH-TTCCCEECCCCCGGGT-TCCCCHHHHHHHHHHHHTTC-CSCCCTTCCHHHHH
T ss_pred hHHHHHhcCChhHHHHHH--HHHHHHH-cCCCEEEecCCCCCcC-CCCCCHHHHHHHHHHHhcCC-CCCCCCCCcHHHHH
Confidence 456666667777666655 3333332 3788999999987421 24567899999998887643 47988889999999
Q ss_pred HHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChH
Q 014769 92 AIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLD 171 (419)
Q Consensus 92 ~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 171 (419)
++++++.+.+|.++++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.+++++++++.+|++
T Consensus 86 ~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~ 165 (406)
T 1xi9_A 86 AIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYTGLVKFYGGKPVEYRTIEEEDWQPDID 165 (406)
T ss_dssp HHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHHTTCEEEEEEEEGGGTSEECHH
T ss_pred HHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHHHHHHHcCCEEEEeecCCCcCCcCCHH
Confidence 99999998888888899999999999999999999999999999999999999999999999999998865456778999
Q ss_pred HHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecC
Q 014769 172 AVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSI 250 (419)
Q Consensus 172 ~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~ 250 (419)
.|++++++++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ...++..++ .++ +++++|+
T Consensus 166 ~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~-~~~~~~~~~-~~~~~i~~~s~ 243 (406)
T 1xi9_A 166 DIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEG-EHISPGSLT-KDVPVIVMNGL 243 (406)
T ss_dssp HHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSS-CCCCHHHHC-SSSCEEEEEES
T ss_pred HHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCC-CCCCHHHcC-CCceEEEEecc
Confidence 9999998888999999999999999999999999999999999999999999988743 333444454 456 8999999
Q ss_pred CCcCCCCCceeEEEE--eeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLV--TNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 251 sK~~~~~G~r~G~~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
||.++++|+|+||++ ++++. . .++++.+.......++++.+.|.++.++|+.. .+++++.+++++++++.+.+
T Consensus 244 sK~~~~~G~r~G~~~~~~~~~~-~---~~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~ 318 (406)
T 1xi9_A 244 SKVYFATGWRLGYMYFVDPENK-L---SEVREAIDRLARIRLCPNTPAQFAAIAGLTGP-MDYLKEYMKKLKERRDYIYK 318 (406)
T ss_dssp TTTTCCGGGCCEEEEEECTTCT-T---HHHHHHHHHHHHHTCCSCSHHHHHHHHHHHSC-CHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCccEEEEEEEecCchh-H---HHHHHHHHHHHHhhcCCCHHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHH
Confidence 999988999999998 54210 0 03666666554322677888999999999643 45688889999999999999
Q ss_pred HhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHH
Q 014769 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLG 406 (419)
Q Consensus 329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~ 406 (419)
.|+++|++. +..|.+|+++|++++... ..+..++...+++++||.+.||..|+. .+++||+++.++++|+++++
T Consensus 319 ~L~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~lRis~~~~~~~i~~~~~ 394 (406)
T 1xi9_A 319 RLNEIPGIS-TTKPQGAFYIFPKIEVGP---WKNDKEFVLDVLHNAHVLFVHGSGFGEYGAGHFRAVFLPPIEILEEAMD 394 (406)
T ss_dssp HHHTSTTEE-CCCCCBSSEECCEECSCS---CSSHHHHHHHHHHHHCEECEEGGGGCGGGTTBEEEECCSCHHHHHHHHH
T ss_pred HHHhCCCCe-eecCCeeEEEEEecCccC---CCCHHHHHHHHHHhCCEEEeCchhcCCCCCCEEEEEecCCHHHHHHHHH
Confidence 999988887 447888999998876310 125677888887688999999998875 68999999989999999999
Q ss_pred HHHHHHHHHhc
Q 014769 407 RMKAFCQRHTK 417 (419)
Q Consensus 407 ~l~~~~~~~~~ 417 (419)
+|+++++++.+
T Consensus 395 ~l~~~l~~~~~ 405 (406)
T 1xi9_A 395 RFEKFMKERLK 405 (406)
T ss_dssp HHHHHHHHC--
T ss_pred HHHHHHHHHhc
Confidence 99999987643
No 20
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=100.00 E-value=1.1e-47 Score=369.04 Aligned_cols=378 Identities=20% Similarity=0.240 Sum_probs=305.6
Q ss_pred cccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHH-------------HHHHHHHHhC
Q 014769 8 KWGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEA-------------EDAIVDAVRS 74 (419)
Q Consensus 8 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v-------------~~a~~~~~~~ 74 (419)
+|+...+++.+..+++.++.+.+...+ .++++|+|+.|.|.... +|. ..+ .++..+.
T Consensus 2 ~~~~~~s~~~~~~~~~~~~~~~~~~~~-----~~~~~i~l~~G~p~~~~-~p~-~~~~~~~~~~~~~~~~~~~~~~~--- 71 (425)
T 2r2n_A 2 NYARFITAASAARNPSPIRTMTDILSR-----GPKSMISLAGGLPNPNM-FPF-KTAVITVENGKTIQFGEEMMKRA--- 71 (425)
T ss_dssp CGGGGSCHHHHTCCCCSGGGHHHHHHH-----SCTTCEECCCCCCCGGG-CSE-EEEEEEETTSCCEEECHHHHHHH---
T ss_pred chhHHHHHHHhcCCCchHHHHHHHhhc-----CCCCeEEcCCcCCCchh-CCH-HHHHHHHhhcccccccccchhhh---
Confidence 366667888888899999988874432 14679999999986321 221 100 1111111
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-------CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH
Q 014769 75 GKFNCYATNSGIPPARRAIADYLSRDLPYKLS-------ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI 147 (419)
Q Consensus 75 ~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~ 147 (419)
..|+++.|++++|++|++++.+.+|...+ +++|++|+|+++++..++++++++||+|++++|+|+++...
T Consensus 72 ---~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~~~ 148 (425)
T 2r2n_A 72 ---LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTLQS 148 (425)
T ss_dssp ---TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH
T ss_pred ---cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHH
Confidence 37999999999999999999988887664 37999999999999999999999999999999999999999
Q ss_pred HhhcCCEEEEEeccCCCCcccChHHHHHhhc------------CCccEEEE-eCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 148 AQRKQVEVRHFDLLPERNWEVDLDAVEALAD------------KNTAAMVI-INPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~------------~~~~~v~i-~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
++..|.+++.++++. .++|++.|+++++ ++++++++ ++|+||||.++|.+++++|+++|+++|+
T Consensus 149 ~~~~g~~~~~v~~~~---~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~ 225 (425)
T 2r2n_A 149 LHPLGCNIINVASDE---SGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDF 225 (425)
T ss_dssp HGGGTCEEEEECEET---TEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTC
T ss_pred HHHcCCEEEEeCcCC---CCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCC
Confidence 999999999998753 2589999999886 35677765 5899999999999999999999999999
Q ss_pred eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCc
Q 014769 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIP 293 (419)
Q Consensus 215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~ 293 (419)
++|+||+|+++.|++....++..++..+++++++||||.++ +|+|+||+++++ ++++.+.... ..+++++
T Consensus 226 ~li~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~~-~GlRiG~~~~~~--------~l~~~l~~~~~~~~~~~~ 296 (425)
T 2r2n_A 226 LIIEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKIIS-SGLRIGFLTGPK--------PLIERVILHIQVSTLHPS 296 (425)
T ss_dssp EEEEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTTC-STTCCEEEEEEH--------HHHHHHHHHHHTTTCSSC
T ss_pred EEEEECCcccccCCCCCCCCccccCCCCCEEEEccchhhcc-CccceEEEecCH--------HHHHHHHHHHHHhcCCCC
Confidence 99999999999888766666666666678999999999987 999999999975 5777777664 3356789
Q ss_pred hHHHHHHHHHHcccc----hHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHH
Q 014769 294 TFIQGAIPQILEKTK----EDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFAL 368 (419)
Q Consensus 294 ~~~~~a~~~~l~~~~----~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~ 368 (419)
.+.|.++..+|+... .+++++.+++++++++.+.+.|++ +|++..+..|.+|+|+|++++.. .+..+++.
T Consensus 297 ~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~p~~g~~~~~~~~~~-----~~~~~~~~ 371 (425)
T 2r2n_A 297 TFNQLMISQLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWLTGLAEWHVPAAGMFLWIKVKGI-----NDVKELIE 371 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSSEEECCCSBSSEEEEEETTC-----SCCHHHHH
T ss_pred HHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEeCCCceEEEEEEeCCC-----CCHHHHHH
Confidence 999999999987521 366788889999999999999987 67763244789999999999742 13455444
Q ss_pred HHHHhcCeEeecCCCCCC-----CCeEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 014769 369 KLAKEESVIVTPGIYVGL-----KNWLRIAFC-AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 369 ~ll~~~gv~v~~g~~~~~-----~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.+.++||.+.||..|+. .+++||+++ .+++++++++++|++++++.
T Consensus 372 ~~l~~~gv~v~pg~~f~~~~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 424 (425)
T 2r2n_A 372 EKAVKMGVLMLPGNAFYVDSSAPSPYLRASFSSASPEQMDVAFQVLAQLIKES 424 (425)
T ss_dssp THHHHTTEECEEGGGGSSSTTSCCCEEEEECSSCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCcEEechhhhcCCCCCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHHh
Confidence 555788999999998864 479999996 79999999999999998764
No 21
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=100.00 E-value=3.4e-48 Score=367.45 Aligned_cols=371 Identities=12% Similarity=0.101 Sum_probs=289.0
Q ss_pred CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHH-hCCCCCCCCCCCCCHHHH
Q 014769 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAV-RSGKFNCYATNSGIPPAR 90 (419)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~-~~~~~~~Y~~~~g~~~lr 90 (419)
..+.+...+++.|..++..+.+ ...+++|||+.|.| ...+.+++++.+.++.. .+ ......+|+++.|.++||
T Consensus 4 ~~~~~~~~~~~~i~~~~~~~~~----~~~~~~I~l~~G~~~d~~~~~~~~~~v~~a~~-~~~~~~~~~~Y~~~~G~~~lr 78 (405)
T 3k7y_A 4 LLSSLENIEVDNILKTAREFKE----DTCEEKINLSIGVCCNDDGDLHIFDSVLNADK-LVTENYKEKPYLLGNGTEDFS 78 (405)
T ss_dssp GGGGCCCCCCCHHHHHHHHHTT----SSCSSCEECSCSSCBCTTSSBCCCHHHHHHHH-HHHHHCCCCCCCTTSSCHHHH
T ss_pred hhhcCCCCCCChHHHHHHHHhc----CCCcCcEEeeeeeeECCCCCCcccHHHHHHHH-HhcCCCCCCCCCCCCCcHHHH
Confidence 3455667788888888875433 33578999999974 22334567788888876 43 334456899999999999
Q ss_pred HHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769 91 RAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (419)
Q Consensus 91 ~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (419)
++|++|+.+..+..+++++ +++|+|+++|+..++.+++. + |+|++++|+|+.|...++..|.+++.+++..++++
T Consensus 79 ~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~ 157 (405)
T 3k7y_A 79 TLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHVNMIESRGFNLKYINFFDYNLI 157 (405)
T ss_dssp HHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHHHHHHTTTCEEEEECCEETTTT
T ss_pred HHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHHHHHHHcCCeEEEEeccccccC
Confidence 9999999776665666775 59999999999999999988 8 99999999999999999999999999998545568
Q ss_pred ccChHHHHHhhcC--CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC--CCCcccc-CC
Q 014769 167 EVDLDAVEALADK--NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP--YTPMGLF-GS 240 (419)
Q Consensus 167 ~~~~~~l~~~~~~--~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~--~~~~~~~-~~ 240 (419)
++|++.+++++++ +++++++++| |||||.+++.+++++|+++|+++++++|+||+|.++.+++.. ..++..+ ..
T Consensus 158 ~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~~l~~~~~~~~~~~~~~~~~~ 237 (405)
T 3k7y_A 158 DINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQGFGHTNLEEDVLLIRKFEEK 237 (405)
T ss_dssp EECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCTTTSSSSTTGGGHHHHHHHTT
T ss_pred CcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcccccCCCcccchHHHHHHHhc
Confidence 9999999998864 4567777665 899999999999999999999999999999999999876421 1122222 22
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH----Hhhh-ccccCCchHHHHHHHHHHcccc-----hH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI----KDCL-SIYSDIPTFIQGAIPQILEKTK-----ED 310 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~ 310 (419)
.+++++++||||.|+++|+|+||+++.... +++++.+ .... .....++..+|.++..++.... .+
T Consensus 238 ~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~l~~~~~~ 312 (405)
T 3k7y_A 238 NIAFSVCQSFSKNMSLYGERAGALHIVCKN-----QEEKKIVFNNLCFIVRKFYSSPVIHTNRILCQLLNNQNLKLNWIK 312 (405)
T ss_dssp TCCEEEEEECTTTSCCTTTTEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCcEEEEeeCCccCCCccccceEEEEEeCC-----HHHHHHHHHHHHHHHhcccCCCcHHHHHHHHHHhCCHHHHHHHHH
Confidence 358999999999999999999999753211 1344433 3222 2334567788988888887631 23
Q ss_pred HHHHHHHHHHHHHHHHHHHhh----cCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVK----EIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~----~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
++++++++++++++.+.+.|+ ++. ++. +..|++|+|+|+.++. +++.+| +++||.+.||.
T Consensus 313 ~l~~~~~~~~~~R~~l~~~L~~~~~~~g~~~~~~-~~~p~gg~f~~~~l~~----------~~~~~L-~~~gV~v~p~~- 379 (405)
T 3k7y_A 313 ELSQLSQRITNNRILFFNKLETYQKKYNLNYDWN-VYKKQRGLFSFVPLLA----------KIAEHL-KTHHIYIINNG- 379 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCGG-GGSSCCSSEEECGGGG----------GGTTTT-TTTTEECCTTS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCc-cccCCceEEEecCCCH----------HHHHHH-HHCCEeecCCC-
Confidence 466777889999999999998 762 145 4589999999987752 345566 88999999964
Q ss_pred CCCCCeEEEEee-cCHHHHHHHHHHHHHHHHH
Q 014769 384 VGLKNWLRIAFC-AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 384 ~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~ 414 (419)
|||++ .+++++++++++|+++++.
T Consensus 380 -------Ris~a~~~~~~i~~~~~~i~~~~~~ 404 (405)
T 3k7y_A 380 -------RINVSGITKNNVDYIADKICLSLSQ 404 (405)
T ss_dssp -------EEEGGGCCTTHHHHHHHHHHHHHHC
T ss_pred -------eEEEeccCHHHHHHHHHHHHHHHhh
Confidence 99995 6899999999999998864
No 22
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=100.00 E-value=4.9e-48 Score=365.81 Aligned_cols=352 Identities=18% Similarity=0.274 Sum_probs=303.9
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
..|+++|||+.|++ .++.++.+.+++.+.+.... ..|++ .| .++|+++++++.+.+|..+++++|++|+|+++
T Consensus 20 ~~g~~~idl~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~-~~-~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~ 92 (377)
T 3fdb_A 20 RYGQGVLPLWVAES----DFSTCPAVLQAITDAVQREA-FGYQP-DG-SLLSQATAEFYADRYGYQARPEWIFPIPDVVR 92 (377)
T ss_dssp SSCTTSEECCSSCC----CSCCCHHHHHHHHHHHHTTC-CSSCC-SS-CCHHHHHHHHHHHHHCCCCCGGGEEEESCHHH
T ss_pred ccCCCeeeecccCC----CCCCCHHHHHHHHHHHHcCC-CCCCC-CC-HHHHHHHHHHHHHHhCCCCCHHHEEEeCChHH
Confidence 35889999999974 35778999999999987643 47888 77 89999999999988888889999999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
+++.++.+++++||+|+++.|+|.++...++..|.+++.++++++ +|++.++++++++++++++++|+||||.++|
T Consensus 93 a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 168 (377)
T 3fdb_A 93 GLYIAIDHFTPAQSKVIVPTPAYPPFFHLLSATQREGIFIDATGG----INLHDVEKGFQAGARSILLCNPYNPLGMVFA 168 (377)
T ss_dssp HHHHHHHHHSCTTCCEEEEESCCTHHHHHHHHHTCCEEEEECTTS----CCHHHHHHHHHTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEEccCCCC----CCHHHHHHHhccCCCEEEEeCCCCCCCCCCC
Confidence 999999999999999999999999999999999999999987643 8999999999888999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+...++++++.|+||.++++|+|+||+++.++ +
T Consensus 169 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~-------~ 241 (377)
T 3fdb_A 169 PEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVSDTAASVCITITAPSKAWNIAGLKCAQIIFSNP-------S 241 (377)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSCHHHHHHEEEEECSTTTTTCGGGCCEEEECCSH-------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHHccCCCcEEEEEeChHhccCcchhheEEEeCCH-------H
Confidence 9999999999999999999999999998877 5555554444456789999999999899999999887542 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPW 355 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~ 355 (419)
+++.++.... .+++++++.+.++..+++.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++..
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~ 319 (377)
T 3fdb_A 242 DAEHWQQLSPVIKDGASTLGLIAAEAAYRYG-TDFLNQEVAYLKNNHDFLLHEIPKRIPGAK-ITPMQATYLMWIDFRDT 319 (377)
T ss_dssp HHHHHHHSCHHHHCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHSTTCE-ECCCSBCSEEEEECTTS
T ss_pred HHHHHHHHHHhhcCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCeeEEEEEECccc
Confidence 7777776543 35678899999988888754 577889999999999999999998 78888 55888999999998753
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
. .+.+++..+++++||.+.||..|+. ++++|++++.+++++++++++|+++++++
T Consensus 320 ~-----~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 320 T-----IEGSPSEFFIEKAKVAMNDGAWFGEDGTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp C-----CCSCHHHHHHHHHCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred C-----CCHHHHHHHHHhCCEEecCChhccCCCCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 1 1246777887878999999998875 68999999889999999999999998754
No 23
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=100.00 E-value=2e-47 Score=369.94 Aligned_cols=383 Identities=17% Similarity=0.215 Sum_probs=305.0
Q ss_pred CchhhhhCCchhH-HHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC----CCCCCCCCCCCCH
Q 014769 13 DKQEHKAAPAVTV-KTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATNSGIP 87 (419)
Q Consensus 13 ~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~g~~ 87 (419)
+.++....++..+ ..+.........+.++.++|+|+.|++ .++.++.+.+++.+++.. .....|++..|..
T Consensus 39 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~g~~----~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~ 114 (449)
T 3qgu_A 39 RNENFGKLRAGYLFPEIARRRKAHQEKNPDAKIISLGIGDT----TEPLPKYIADAMAKAAAGLATREGYSGYGAEQGQG 114 (449)
T ss_dssp CCHHHHHCCSCCHHHHHHHHHHHHHHHCTTCCCEECSSCCC----CCCCCHHHHHHHHHHHHGGGGSCCCCCSTTTTCCH
T ss_pred hhHHHHhCCCcchHHHHHHHHHHHHhhCCCCCEEEeeCCCC----CCCCCHHHHHHHHHHHHhhccccCCCCCCCCCCcH
Confidence 3444444444433 355544444343456889999999975 466789999999998873 3345898889999
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE----------EEE
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE----------VRH 157 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~----------~~~ 157 (419)
+||+++++++. +|.++++++|++|+|+++++..+ ..++++||+|++++|+|.++...+...|.+ ++.
T Consensus 115 ~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~-~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~g~~~~~~~~~~~~ 191 (449)
T 3qgu_A 115 ALREAVASTFY--GHAGRAADEIFISDGSKCDIARI-QMMFGSKPTVAVQDPSYPVYVDTSVMMGMTGDHNGTGFDGIEY 191 (449)
T ss_dssp HHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHH-HHHHCSSSCEEEEESCCTHHHHHHHHHTCSCCBCSSSBTTEEE
T ss_pred HHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHH-HHHhCCCCEEEEcCCCChhHHHHHHHcCCcccccccccceeEE
Confidence 99999999997 77788899999999999999998 888899999999999999999999999988 899
Q ss_pred EeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccc
Q 014769 158 FDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
+++++++++..+++.+ +++++|++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++....++..
T Consensus 192 ~~~~~~~~~~~~~~~~-----~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~ 266 (449)
T 3qgu_A 192 MVCNPDNHFFPDLSKA-----KRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYISNPDCPKTIYE 266 (449)
T ss_dssp EECCGGGTTCCCGGGC-----CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCCTTSCSSGGG
T ss_pred EecccccCCcCChhHc-----CCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhcCCCCCCCHhh
Confidence 9987655555665432 47899999999999999999999999999999999999999999999988765556655
Q ss_pred cCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc--hhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHH
Q 014769 238 FGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ--KSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 238 ~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~--~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
++. .++++++.|+||.++++|+|+||++++++ +.. ...+...+.... ..++++++++|.++..++.....++++
T Consensus 267 ~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 344 (449)
T 3qgu_A 267 IPGADEVAIETCSFSKYAGFTGVRLGWTVVPKA--LKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACLQPEGLKEMN 344 (449)
T ss_dssp STTGGGTEEEEEECSGGGTCTTCCCEEEECCTT--CBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHTSHHHHHHHH
T ss_pred ccCCCCcEEEEecchhhcCCccceeEEEecCHH--HHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHHhhcCHHHHH
Confidence 543 35689999999999999999999998653 210 001122333332 234578899999998888763346788
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEE
Q 014769 314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLR 391 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~R 391 (419)
+.+++++++++.+.+.|+++ ++. +..|.+|+|+|+.++ . .+..+++..|++++||.+.||..|+. ++++|
T Consensus 345 ~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~-~-----~~~~~~~~~l~~~~gI~v~pg~~f~~~~~~~iR 416 (449)
T 3qgu_A 345 AMIKFYKENAQILKTTFTEM-GFS-VYGGDDAPYIWVGFP-G-----KPSWDVFAEILERCNIVTTPGSGYGPAGEGFVR 416 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCC-EEESSSSSEEEEECT-T-----SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEEE
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCe-eeCCCCeeEEEEECC-C-----CCHHHHHHHHHHHCCEEEecchHhCCCCCCeEE
Confidence 99999999999999999988 777 447888999999987 2 25778888898888999999998875 68999
Q ss_pred EEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769 392 IAFCAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 392 is~~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
|++..++++|++++++|++++++...
T Consensus 417 is~~~~~e~i~~~l~~l~~~~~~~~~ 442 (449)
T 3qgu_A 417 ASAFGSRENILEAVRRFKEAYGKRNA 442 (449)
T ss_dssp EECCSCHHHHHHHHHHHHHHHC----
T ss_pred EEecCCHHHHHHHHHHHHHHHHhcCc
Confidence 99988999999999999999876543
No 24
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=100.00 E-value=3.2e-47 Score=361.38 Aligned_cols=349 Identities=23% Similarity=0.355 Sum_probs=297.3
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAV 120 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al 120 (419)
.++|+|+.|.+. +++++.+.+++.+.+... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|+++++
T Consensus 30 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~ 104 (386)
T 1u08_A 30 HQAINLSQGFPD----FDGPRYLQERLAHHVAQG-ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEAL 104 (386)
T ss_dssp TTCEECCCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHH
T ss_pred CCeEEecCCCCC----CCCCHHHHHHHHHHHHhh-ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHH
Confidence 468999999863 456789999999988753 34798888999999999999988888788888 999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..++++++++||+|++++|+|+++...++..|.+++.++++++ ++.+|++.++++++++++++++++|+||||.++|.+
T Consensus 105 ~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~ 183 (386)
T 1u08_A 105 YAAITALVRNGDEVICFDPSYDSYAPAIALSGGIVKRMALQPP-HFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQA 183 (386)
T ss_dssp HHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECCTT-TCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCCchhHHHHHHHcCCEEEEeecCcc-cCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHH
Confidence 9999999999999999999999999999999999999988643 568999999999987889999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
++++|+++|+++|+++|+||+|+.+.+++....++..+. ..++++++.|+||.++++|+|+||+++++ +++
T Consensus 184 ~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 255 (386)
T 1u08_A 184 DFAALWQAIAGHEIFVISDEVYEHINFSQQGHASVLAHPQLRERAVAVSSFGKTYHMTGWKVGYCVAPA--------PIS 255 (386)
T ss_dssp HHHHHHHHHTTSCCEEEEECTTTTCBCCSSCCCCGGGSHHHHTTEEEEEEHHHHTTCGGGCCEEEECCH--------HHH
T ss_pred HHHHHHHHHHHcCcEEEEEccccccccCCCCCcChhcccCccCcEEEEecchhhcCCcccceEEEEcCH--------HHH
Confidence 999999999999999999999999988765544554442 23568999999999988999999999865 577
Q ss_pred HHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 280 DSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 280 ~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
+.++.... ..++++.+.|.++..+|+.. .+++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++...
T Consensus 256 ~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~-- 330 (386)
T 1u08_A 256 AEIRKVHQYLTFSVNTPAQLALADMLRAE-PEHYLALPDFYRQKRDILVNALNES-RLE-ILPCEGTYFLLVDYSAVS-- 330 (386)
T ss_dssp HHHHHHHHHHTSSCCHHHHHHHHHHHHHC-THHHHTHHHHHHHHHHHHHHHTTSS-SCE-ECCCCBSSEEEEECTTTC--
T ss_pred HHHHHHHHhhccCCChHHHHHHHHHHhCC-cHHHHHHHHHHHHHHHHHHHHHHHC-CCe-ecCCCceEEEEEecCCCC--
Confidence 77776543 35677888898988888764 5788899999999999999999987 777 447888999999987420
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
..+..++..++++++||.+.||..|+ .++++||+++.++++|++++++|++
T Consensus 331 -~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~iRis~~~~~~~i~~~~~~l~~ 385 (386)
T 1u08_A 331 -TLDDVEFCQWLTQEHGVAAIPLSVFCADPFPHKLIRLCFAKKESTLLAAAERLRQ 385 (386)
T ss_dssp -CSCHHHHHHHHHHHSCEECEEGGGGCSSCCCSCEEEEECCSCHHHHHHHHHHHTT
T ss_pred -CCCHHHHHHHHHHhCCEEEeCchHhCCCCCCCCEEEEEEcCCHHHHHHHHHHHhh
Confidence 02467788888778899999998875 3679999998899999999999864
No 25
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=100.00 E-value=3.8e-47 Score=361.45 Aligned_cols=357 Identities=18% Similarity=0.249 Sum_probs=306.7
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.++++|||+.|++ .+++++.+.+++.+.+.... ..|++. ..++++++++++.+.+|.++++++|++|+|++++
T Consensus 25 ~g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a 97 (391)
T 3dzz_A 25 LKEKELPMWIAEM----DFKIAPEIMASMEEKLKVAA-FGYESV--PAEYYKAVADWEEIEHRARPKEDWCVFASGVVPA 97 (391)
T ss_dssp CCTTCEECCSSCC----SSCCCHHHHHHHHHHHTTCC-CCCBCC--CHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHH
T ss_pred cCCCceeccccCC----CCCCCHHHHHHHHHHHhcCc-CCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHH
Confidence 3679999999974 46788999999999987643 367764 6899999999999988888889999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc-CCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~ 197 (419)
+..++.++.++||+|+++.|+|.++...+...|.+++.++++ .++++.+|++.++++++ +++++|++++|+||||.++
T Consensus 98 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~ 177 (391)
T 3dzz_A 98 ISAMVRQFTSPGDQILVQEPVYNMFYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAW 177 (391)
T ss_dssp HHHHHHHHSCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCC
T ss_pred HHHHHHHhCCCCCeEEECCCCcHHHHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCccc
Confidence 999999999999999999999999999999999999999885 34456799999999997 6889999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
|.+++++|+++|+++|+++|+||+|+.+.+.+....++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 178 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~~i~~~s~sK~~g~~G~r~G~~~~~~~------ 251 (391)
T 3dzz_A 178 SEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDITPAFTVDWDAKNWVVSLISPSKTFNLAALHAACAIIPNP------ 251 (391)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCCGGGSCTTTGGGEEEEECSHHHHTCTTTCCEEEECCSH------
T ss_pred CHHHHHHHHHHHHHCCCEEEEecccccccCCCCCceehhhcCccccCcEEEEEeChhhccccchhheEEEECCH------
Confidence 9999999999999999999999999999888766666655543 35789999999999899999999998742
Q ss_pred hhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeec
Q 014769 276 SGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKL 352 (419)
Q Consensus 276 ~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~ 352 (419)
++++.++.... ..++++++.+.++..+++. ..+++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.+
T Consensus 252 -~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~ 328 (391)
T 3dzz_A 252 -DLRARAEESFFLAGIGEPNLLAIPAAIAAYEE-GHDWLRELKQVLRDNFAYAREFLAKEVPEVK-VLDSNASYLAWVDI 328 (391)
T ss_dssp -HHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCCBSSEEEEEC
T ss_pred -HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhhCCCcE-EeccCceEEEEEeh
Confidence 57777776532 2457788888888888876 3577889999999999999999998 88888 55888999999988
Q ss_pred CcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 353 NPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 353 ~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+... .+..++...|++++||.+.||..|+. ++++|++++.+++++++++++|+++++++.
T Consensus 329 ~~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~~ 390 (391)
T 3dzz_A 329 SALG----MNAEDFCKYLREKTGLIISAGNGYRGNGHEFVRINLACPKELVIDGMQRLKQGVLNLN 390 (391)
T ss_dssp GGGC----SCHHHHHHHHHHHHCEECEESGGGCTTGGGEEEEECCSCHHHHHHHHHHHHHHHHTCC
T ss_pred hhcC----CCHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHHHhh
Confidence 7521 25778888887688999999998876 489999999899999999999999998753
No 26
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-47 Score=362.16 Aligned_cols=350 Identities=21% Similarity=0.297 Sum_probs=293.8
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~ 117 (419)
+.|.++|||+.|.+. ++.++.+.+++.+++.......|++..|..++|+++++++.+.+|..++++ +|++|+|++
T Consensus 22 ~~g~~~idl~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~ 97 (376)
T 2dou_A 22 ERGVGLIDLSIGSTD----LPPPEAPLKALAEALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQ 97 (376)
T ss_dssp HTTCCCEECSSCCCC----CCCCHHHHHHHHHHTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHH
T ss_pred ccCCCEEeccCCCCC----CCCCHHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcH
Confidence 347889999999863 456789999999988654455788767889999999999988778777777 999999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
+++..++++++++||+|++++|+|+++...++..|.+++.+++ ++++.+|++.++++++++++++++++|+||||.++
T Consensus 98 ~a~~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~~~~--~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~ 175 (376)
T 2dou_A 98 EGLAHLLLALTEPEDLLLLPEVAYPSYFGAARVASLRTFLIPL--REDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVA 175 (376)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHTTCEEEEECB--CTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCCcHhHHHHHHHcCCEEEEeeC--CCCCCCCHHHHHHhhccCceEEEECCCCCCcCccC
Confidence 9999999999999999999999999999999999999999887 45667899999888876788999999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
|.+++++|+++|+++|+++|+||+|+.+.+++.....+...+..+++++++|+||.++++|+|+||+++++ +
T Consensus 176 ~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 247 (376)
T 2dou_A 176 DWGYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSYNLAGFRLGFALGSE--------E 247 (376)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHHTCGGGCCEEEEECH--------H
T ss_pred CHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhcCChhheeEEEecCH--------H
Confidence 99999999999999999999999999988866322222222334578999999999988999999999864 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.++.... .+.+++.+.|.++..+++.. .+++++.+++++++++.+.+.|+++ +. +..|.+|+|+|++++..
T Consensus 248 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~--~~-~~~~~~~~~~~~~~~~~- 322 (376)
T 2dou_A 248 ALARLERVKGVIDFNQYAGVLRMGVEALKTP-KEVVRGYARVYRERALGMAEALKGV--LS-LLPPRATMYLWGRLPEG- 322 (376)
T ss_dssp HHHHHHHHHHHHCCCSCHHHHHHHHHHHTSC-HHHHHHHHHHHHHHHHHHHHHHTTT--SE-ECCCCBSSEEEEECCTT-
T ss_pred HHHHHHHHHHhcccCCCHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHHHHHh--cC-ccCCCeeEEEEEECCCC-
Confidence 7777776543 34567889999999999763 5788889999999999999999886 55 44678899999998742
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
.+..++...|+++ ||.+.||..|+. ++++|++++.+++++++++++|++++
T Consensus 323 ----~~~~~~~~~l~~~-gi~v~~g~~f~~~~~~~~Ris~~~~~~~i~~~l~~l~~~l 375 (376)
T 2dou_A 323 ----VDDLEFGLRLVER-GVALAPGRGFGPGGKGFVRIALVRPLEELLEAAKRIREAL 375 (376)
T ss_dssp ----CCHHHHHHHHHHT-TEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHTC
T ss_pred ----CCHHHHHHHHHHC-CEEEcCchhhCCCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 2467788888665 999999998874 68999999878999999999998764
No 27
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=100.00 E-value=4.3e-47 Score=362.13 Aligned_cols=357 Identities=18% Similarity=0.270 Sum_probs=299.6
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
+++|+|+.|++. +++++.+.+++.+.+... ...|++. ..++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus 31 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~ 103 (399)
T 1c7n_A 31 NEVVPLSVADME----FKNPPELIEGLKKYLDET-VLGYTGP--TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVF 103 (399)
T ss_dssp TTCCCCCSSSCS----SCCCHHHHHHHHHHHHHC-CCSSBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHH
T ss_pred CCceeeeecCCC----CCCCHHHHHHHHHHHhcC-CCCCCCC--cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHH
Confidence 589999999853 567889999999988643 3478764 899999999999887787788899999999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCH
Q 014769 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~ 199 (419)
.++++++++||+|++++|+|+++...+...|.+++.++++++ +++.+|++.|+++++ +++++|++++|+||||.++|.
T Consensus 104 ~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~ 183 (399)
T 1c7n_A 104 NAVREFTKPGDGVIIITPVYYPFFMAIKNQERKIIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKK 183 (399)
T ss_dssp HHHHHHCCTTCEEEECSSCCTHHHHHHHTTTCEEEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCH
T ss_pred HHHHHhcCCCCEEEEcCCCcHhHHHHHHHcCCEEEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCH
Confidence 999999999999999999999999999999999998887533 346799999999987 578889999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
+++++|+++|+++|+++|+||+|+.+.+++..+.++..+.. .++++++.|+||.++++|+|+||++++++ +
T Consensus 184 ~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~ 256 (399)
T 1c7n_A 184 DELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEHTVFQSIDEQLADKTITFTAPSKTFNIAGMGMSNIIIKNP-------D 256 (399)
T ss_dssp HHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------H
T ss_pred HHHHHHHHHHHHcCCEEEEEccccccccCCCCcccHHHcCccccCcEEEEEeChhhccccchheEEEEECCH-------H
Confidence 99999999999999999999999999887765555555543 45789999999999889999999998641 4
Q ss_pred HHHHHHhhhccc--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCc
Q 014769 278 IIDSIKDCLSIY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 278 ~~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
+++.++...... .+++++.+.++.++++.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus 257 ~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 334 (399)
T 1c7n_A 257 IRERFTKSRDATSGMPFTTLGYKACEICYKEC-GKWLDGCIKVIDKNQRIVKDFFEVNHPEIK-APLIEGTYLQWIDFRA 334 (399)
T ss_dssp HHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCTTSB-CCCCSBSSEEEEECGG
T ss_pred HHHHHHHHHhhcccCCCCHHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHhhCCCCe-EecCCceEEEEEEccc
Confidence 777776654322 367888998888888753 577888999999999999999998 88887 4478889999998864
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
.. .+..++...|++++||.+.||..|+ ..+++||+++..++++++++++|+++++++.++
T Consensus 335 ~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~~~~ 396 (399)
T 1c7n_A 335 LK----MDHKAMEEFMIHKAQIFFDEGYIFGDGGIGFERINLAAPSSVIQESLERLNKALKDLKNR 396 (399)
T ss_dssp GC----CCHHHHHHHHHHTTCCCCEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHHC--
T ss_pred CC----CCHHHHHHHHHHhCCEEEeCccccCCCCCCeEEEEeccCHHHHHHHHHHHHHHHHHHHhc
Confidence 21 2467788888667899999999886 368999999877899999999999999987655
No 28
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.5e-47 Score=363.32 Aligned_cols=356 Identities=26% Similarity=0.421 Sum_probs=299.4
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~a 119 (419)
..++|+|+.|.+. ++.++.+.+++.+++... ...|++..|..++|+++++++.+.+|.+++++ +|++|+|++++
T Consensus 24 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~a 98 (411)
T 2o0r_A 24 RIGAVNLGQGFPD----EDGPPKMLQAAQDAIAGG-VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEA 98 (411)
T ss_dssp TTTCEESSCSSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHH
T ss_pred cCCeeeccCcCCC----CCCCHHHHHHHHHHHhcC-CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHH
Confidence 4568999999863 456789999999998764 45899888999999999999988888778888 99999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
+..++.+++++||+|++++|+|+++...+...|.+++.++++++ .++.+|++.|++++++++++|++++|+||||.++|
T Consensus 99 l~~~~~~~~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~ 178 (411)
T 2o0r_A 99 IAAAVLGLVEPGSEVLLIEPFYDSYSPVVAMAGAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLS 178 (411)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCC
Confidence 99999999999999999999999999999999999999987653 34679999999999888899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||+++++ +
T Consensus 179 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 250 (411)
T 2o0r_A 179 ATELAAIAEIAVAANLVVITDEVYEHLVFDHARHLPLAGFDGMAERTITISSAAKMFNCTGWKIGWACGPA--------E 250 (411)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHTTCTTTCEEEEECCH--------H
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcChhhccCCCCCEEEEeechhhcCCccceEEEEeeCH--------H
Confidence 999999999999999999999999999887655555555432 4578999999999988999999999864 5
Q ss_pred HHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc
Q 014769 278 IIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL 356 (419)
Q Consensus 278 ~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~ 356 (419)
+++.+..... .+++.+.+.|.++..+|+.. .+++++.+++++++++.+.+.|+++ ++. +..|.+|+|+|++++...
T Consensus 251 ~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~g~~~~~~~~~~~ 327 (411)
T 2o0r_A 251 LIAGVRAAKQYLSYVGGAPFQPAVALALDTE-DAWVAALRNSLRARRDRLAAGLTEI-GFA-VHDSYGTYFLCADPRPLG 327 (411)
T ss_dssp HHHHHHHHHHHHTSCCCTTHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHH-TCE-ECCCCBSSEEEEECGGGT
T ss_pred HHHHHHHHHhhccCCCChHHHHHHHHHHhCC-hHHHHHHHHHHHHHHHHHHHHHHHc-CCE-ecCCCeeEEEEEecCCCC
Confidence 7777766542 34566778888888888754 5778889999999999999999887 777 447788999999986420
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCC-------------CCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVG-------------LKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
..+..++..++++++||.+.||..|. ..+++||+++.+++++++++++|++++++.
T Consensus 328 ---~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~~ 396 (411)
T 2o0r_A 328 ---YDDSTEFCAALPEKVGVAAIPMSAFCDPAAGQASQQADVWNHLVRFTFCKRDDTLDEAIRRLSVLAERP 396 (411)
T ss_dssp ---CCCHHHHHHHHHHHHSEECEEGGGGSCCC--------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC--
T ss_pred ---CCCHHHHHHHHHHhCCEEEcChhhhCCCccccccccccCCCCeEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 02467888888778899999998873 246899999888999999999999887654
No 29
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=100.00 E-value=7.1e-47 Score=358.56 Aligned_cols=353 Identities=17% Similarity=0.288 Sum_probs=303.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.++++|+|+.|++ .+++++.+.+++.+++.... ..|++. ..++++++++++.+.+|..+++++|++|+|++++
T Consensus 22 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a 94 (383)
T 3kax_A 22 KNEELIHAWIADM----DFEVPQPIQTALKKRIEHPI-FGYTLP--PENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPA 94 (383)
T ss_dssp SSSCCEECCCSSC----SSCCCHHHHHHHHHHHHSCC-CCCCCC--CTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHH
T ss_pred CCCCeeecccccC----CCCCCHHHHHHHHHHHhcCC-CCCCCC--CHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHH
Confidence 3679999999974 46788999999999987643 367764 5799999999999988878889999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC-CcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
++.++.+++++||+|+++.|+|.++...++..|.+++.+++++++ +|.+|++.++++++++++++++++|+||||.++|
T Consensus 95 ~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 95 LSTSIQAFTKENESVLVQPPIYPPFFEMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHHHHHCCTTCEEEECSSCCHHHHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 999999999999999999999999999999999999999876433 4679999999999878999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~------- 247 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTFNIAGLQASIIIIPNE------- 247 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHHTCGGGCCEEEECCCH-------
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhccCcchhheEEEeCCH-------
Confidence 999999999999999999999999999988766666666554 36789999999999889999999998542
Q ss_pred hHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecC
Q 014769 277 GIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 277 ~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~ 353 (419)
++++.++..... .++++.+++.++..+++. ..+++++.+++++++++.+.+.|++ +|++. +..|.+++++|+.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 325 (383)
T 3kax_A 248 KLRQAFTSIQYRQGFHGLNIFAYTAMQSAYTE-CNDWLNEIRFYIEDNAKFACEYIKDHIPTLS-VMKPEGSFLLWIDCS 325 (383)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHTTT-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTCE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHhhcccCCCCHHHHHHHHHHHHh-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCceEEEEEEcc
Confidence 577777665432 347888899998888876 3577888999999999999999988 78888 558889999999887
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
... .+..++...|++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 326 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l 382 (383)
T 3kax_A 326 ALN----LSQDERTKLLEEKGKIIVEPGEKYGLGGEEHIGINIGCPRSVLEEILNRLRHTF 382 (383)
T ss_dssp GGC----CCHHHHHHHHHHTSCEECEESGGGCTTCTTEEEEECSSCHHHHHHHHHHHHHHH
T ss_pred ccC----CCHHHHHHHHHhhCCEEeECchhhcCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 521 25778888887688999999998876 58999999989999999999999876
No 30
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=100.00 E-value=2.6e-46 Score=357.69 Aligned_cols=386 Identities=19% Similarity=0.291 Sum_probs=312.6
Q ss_pred ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCC
Q 014769 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGI 86 (419)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~ 86 (419)
|+...+++.....++.++.++....+ + +..|.++|||+.|.|... ..+++.+.+++.+++... ... |+++.|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~g~~~idl~~g~~~~~--~~~~~~v~~a~~~~~~~~~~~~~-y~~~~~~ 77 (407)
T 2zc0_A 3 YTKYLAGRANWIKGSALADVMKKASE-L-QKKGVKLISLAAGDPDPE--LIPRAVLGEIAKEVLEKEPKSVM-YTPANGI 77 (407)
T ss_dssp GGGGSCGGGGGCCCCHHHHHHHHHHH-H-HHSSCCCEECCSCCCCTT--TSCHHHHHHHHHHHHHHCGGGGS-CCCTTCC
T ss_pred chhhhhhhhccCCchHHHHHHHhhhc-c-cCCCCceEeCCCCCCCch--hCCHHHHHHHHHHHHhhcccccc-CCCCCCC
Confidence 33345566666677777777764331 1 123668999999987532 346788999999888653 234 8888899
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (419)
.++|+++++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+++...+...|.+++.++++++
T Consensus 78 ~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~--- 154 (407)
T 2zc0_A 78 PELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTLLAFEQLGAKIEGVPVDND--- 154 (407)
T ss_dssp HHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---
T ss_pred HHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHHHHHHHcCCEEEEcccCCC---
Confidence 99999999999887887788899999999999999999999999999999999999999999999999999987542
Q ss_pred ccChHHHHHhhc----C--CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 167 EVDLDAVEALAD----K--NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 167 ~~~~~~l~~~~~----~--~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
++|++.|+++++ + ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++
T Consensus 155 ~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 234 (407)
T 2zc0_A 155 GMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGDIVPLKALD 234 (407)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSSCCCGGGGC
T ss_pred CCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCCCCChhhcC
Confidence 489999999887 5 67776 4678999999999999999999999999999999999999888766555565665
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-h-HHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-E-DFFCKLI 316 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~-~~~~~~~ 316 (419)
..+++++++|+||.++ +|+|+||+++++ ++++.+..... ...+++++.|.++..+++... . +++++.+
T Consensus 235 ~~~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 305 (407)
T 2zc0_A 235 NEGRVIVAGTLSKVLG-TGFRIGWIIAEG--------EILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEGAL 305 (407)
T ss_dssp SSCCEEEEEESTTTTC-TTSCCEEEECCH--------HHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTTHH
T ss_pred CCCCEEEEcccccccC-CCcceEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHHHH
Confidence 5567899999999987 999999999864 57777776543 345668888999988887642 3 4567788
Q ss_pred HHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEE
Q 014769 317 DTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLR 391 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~R 391 (419)
++++++++.+.+.|++ +|++. +..|.+|+|+|++++.. .+..++...|++++||.+.||..|+ ..+++|
T Consensus 306 ~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~~~~~iR 379 (407)
T 2zc0_A 306 LGYKEKRDIMLKALENHLPNAE-FTKPIAGMFVMFFLPEG-----ADGISFANELMEREGVVVVPGKPFYTDESGKNAIR 379 (407)
T ss_dssp HHHHHHHHHHHHHHHHHCTTSC-BCCCSBSSEEEEECSTT-----CCHHHHHHHHHHHTCEECBCSGGGCSSSCCTTEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCE-EecCCCcEEEEEEcCCC-----CCHHHHHHHHHHhCCeEEECchhccCCCCCCCeEE
Confidence 8899999999999987 57777 44688899999998642 2567788888666699999998885 358999
Q ss_pred EEeec-CHHHHHHHHHHHHHHHHHHhc
Q 014769 392 IAFCA-EPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 392 is~~~-~~~~l~~~l~~l~~~~~~~~~ 417 (419)
|+++. +++++++++++|+++++++.+
T Consensus 380 is~~~~~~~~i~~~~~~l~~~l~~~~~ 406 (407)
T 2zc0_A 380 LNFSRPSKEEIPIGIKKLAKLYKEKFG 406 (407)
T ss_dssp EECSSSCTTHHHHHHHHHHHHHHHHC-
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 99975 789999999999999988765
No 31
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=100.00 E-value=4.3e-47 Score=365.56 Aligned_cols=359 Identities=22% Similarity=0.355 Sum_probs=301.2
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK 117 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~ 117 (419)
..++|+|+.|.+. ++.++.+.+++.+++... ....|++..|..++|+++++++.+.+|.+++++ +|++|+|++
T Consensus 36 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~ 111 (429)
T 1yiz_A 36 QYKPLNLGQGFPD----YHAPKYALNALAAAANSPDPLANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAY 111 (429)
T ss_dssp HHCCEECCSSSCS----SCCCHHHHHHHHHHHTCSCGGGGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHH
T ss_pred cCCEEEecCCCCC----CCCCHHHHHHHHHHHhccccCccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChH
Confidence 3468999999863 456789999999988652 235798888999999999999988778778888 999999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC--------CcccChHHHHHhhcCCccEEEEeCC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER--------NWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~--------~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
+++..++++++++||+|+++.|+|+++...++..|.+++.++++++. ++.+|++.|++++++++++|++++|
T Consensus 112 ~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p 191 (429)
T 1yiz_A 112 EALYATIQGHVDEGDEVIIIEPFFDCYEPMVKAAGGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTP 191 (429)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESS
T ss_pred HHHHHHHHHhcCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCC
Confidence 99999999999999999999999999999999999999999987543 5679999999999878899999999
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+||||.++|.+++++|+++|+++|+++|+||+|..+.+++....++..+. ..++++++.|+||.++++|+|+||+++++
T Consensus 192 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~~~~G~r~G~~~~~~ 271 (429)
T 1yiz_A 192 HNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYEHMVFEPFEHIRICTLPGMWERTITIGSAGKTFSLTGWKIGWAYGPE 271 (429)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHHTCGGGCCEEEESCH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCcEEEEeccccccccCCCCCcChhhccCCcCceEEEecchhccCCCCcceEEEEeCH
Confidence 99999999999999999999999999999999999988776555555443 34578999999999988999999999865
Q ss_pred CCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcc-----cc-hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769 269 PNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEK-----TK-EDFFCKLIDTLRESAEICYDGVKEIPCISCPNK 341 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~-----~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 341 (419)
++++.+.... ..+++.+++.|.++.++|+. .. .+++++.+++++++++.+.+.|+++ ++. +..
T Consensus 272 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~ 341 (429)
T 1yiz_A 272 --------ALLKNLQMVHQNCVYTCATPIQEAIAVGFETELKRLKSPECYFNSISGELMAKRDYMASFLAEV-GMN-PTV 341 (429)
T ss_dssp --------HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHH-TCE-EEE
T ss_pred --------HHHHHHHHHHhhcccCCChHHHHHHHHHHhcccccccchHHHHHHHHHHHHHHHHHHHHHHHhC-CCc-ccC
Confidence 5777776654 33567888899888888876 32 4678889999999999999999887 776 446
Q ss_pred CCceEEEEeecCcccc-------cCCCCHHHHHHHHHHhcCeEeecCCCCCC-------CCeEEEEeecCHHHHHHHHHH
Q 014769 342 PEGSMVTMVKLNPWLL-------EDINDDIEFALKLAKEESVIVTPGIYVGL-------KNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 342 p~~g~~~~~~~~~~~~-------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------~~~~Ris~~~~~~~l~~~l~~ 407 (419)
|.+|+|+|++++.... ....+..+++.+|++++||.+.||..|+. .+++||+++.++++|++++++
T Consensus 342 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~~g~~f~~~~~~~~~~~~iRis~~~~~e~i~~~l~~ 421 (429)
T 1yiz_A 342 PQGGYFMVADWSSLDSKVDLTQETDARKDYRFTKWMTKSVGLQGIPPSAFYSEPNKHLGEDFVRYCFFKKDENLQKAAEI 421 (429)
T ss_dssp CSBSSEEEEECCSSCTTTTCCSSSSSCHHHHHHHHHHHHTSEECBCGGGGSCGGGGGGTTTEEEEECCSCHHHHHHHHHH
T ss_pred CCcceEEEEEcccccccccccccccCCCHHHHHHHHHHhCCEEEeCchHhCCCcccCCCCCeEEEEecCCHHHHHHHHHH
Confidence 7889999999874210 00013567777787788999999988763 579999998899999999999
Q ss_pred HHHHHH
Q 014769 408 MKAFCQ 413 (419)
Q Consensus 408 l~~~~~ 413 (419)
|+++++
T Consensus 422 l~~~l~ 427 (429)
T 1yiz_A 422 LRKWKG 427 (429)
T ss_dssp HHHHSC
T ss_pred HHHhcc
Confidence 998764
No 32
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=100.00 E-value=2.3e-47 Score=361.15 Aligned_cols=358 Identities=18% Similarity=0.295 Sum_probs=294.9
Q ss_pred chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhC
Q 014769 22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101 (419)
Q Consensus 22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 101 (419)
+..++.+.. +.+.+.+ .+ ++|||+.|++. ++.++.+.+++.+.+. ....|+++.|..++|+++++++.+.+
T Consensus 6 ~~~~~~~~~-~~~~~~~-~g-~~i~l~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~g~~~lr~~la~~l~~~~ 76 (376)
T 3ezs_A 6 PYPFERLRA-LLKEITP-KK-RGLDLGIGEPQ----FETPKFIQDALKNHTH--SLNIYPKSAFEESLRAAQRGFFKRRF 76 (376)
T ss_dssp CCHHHHHHH-HHTTCCC-SS-CCCBCSSCCCC----SCCCHHHHHHHHTTGG--GGGSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred cchHHHHHH-HHHhhhc-cC-CEEEeCCCCCC----CCCCHHHHHHHHHhhh--hcCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 344555554 4443433 35 99999999853 5567899999988773 34589998899999999999999888
Q ss_pred CCCCCCCcEEEcccHHHHHHHHHHHhcCC--CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769 102 PYKLSADDVYVTLGCKQAVEVILSVLARP--GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 102 ~~~~~~~~i~~t~g~~~al~~~~~~l~~~--gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
|..+++++|++|+|+++++..++++++++ ||+|+++.|+|.++...++..|.+++.+++++++++.+ .+++++.+
T Consensus 77 g~~~~~~~i~~t~g~~~al~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~---~l~~~~~~ 153 (376)
T 3ezs_A 77 KIELKENELISTLGSREVLFNFPSFVLFDYQNPTIAYPNPFYQIYEGAAKFIKAKSLLMPLTKENDFTP---SLNEKELQ 153 (376)
T ss_dssp SCCCCGGGEEEESSSHHHHHHHHHHHTTTCSSCEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTSCC---CCCHHHHH
T ss_pred CCCCCHHHEEECcCcHHHHHHHHHHHcCCCCCCEEEEecCCcHhHHHHHHHcCCEEEEcccCCCCCcch---hHHhhhcc
Confidence 88788999999999999999999999999 99999999999999999999999999999875544333 45555555
Q ss_pred CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-----CCCcEEEEecCCCcC
Q 014769 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-----SIVPVITLGSISKRW 254 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-----~~~~~i~~~s~sK~~ 254 (419)
+++++++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++.....+...+ ..++++++.|+||.+
T Consensus 154 ~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 233 (376)
T 3ezs_A 154 EVDLVILNSPNNPTGRTLSLEELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS 233 (376)
T ss_dssp HCSEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT
T ss_pred CCCEEEEcCCCCCcCCCCCHHHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc
Confidence 789999999999999999999999999999999999999999999988763322222111 346789999999999
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
+++|+|+||++++. ++++.+..... .+++++.+.+.++.++++. .+++++.+++++++++.+.+.|+
T Consensus 234 g~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~-- 301 (376)
T 3ezs_A 234 SAPGLRSGFIAGDS--------RLLEKYKAFRAYLGYTSANAIQKASEAAWLD--DRHAEFFRNIYANNLKLARKIFK-- 301 (376)
T ss_dssp TCGGGCCEEEEECH--------HHHHHHHHHHTTTCCCCCHHHHHHHHHHHHC--SHHHHHHHHHHHHHHHHHHHHST--
T ss_pred CCccceeEEEeeCH--------HHHHHHHHHHhhhcCCCChHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHhc--
Confidence 89999999999854 67788876643 3567889999999998886 46788889999999999999887
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEeecCHHHHHHHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
++. .|.+|+|+|++++ +..++..+|++++||.+.||..|+ ..+++||+++.+++++++++++|+
T Consensus 302 -~~~---~~~~~~~~~~~~~--------~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~~~iRis~~~~~~~i~~~l~~l~ 369 (376)
T 3ezs_A 302 -NTL---IYPYSFYVYLPVQ--------NGENFAKTLYQNEGIITLPALYLGRNRIGADYVRLALVYDTPLLEKPLEIIE 369 (376)
T ss_dssp -TCC---CCSBSSEEEEECS--------CHHHHHHHHHHHHCCBCEEGGGGCSTTTTTTEEEEECCSCHHHHHHHHHHHH
T ss_pred -CCC---CCCcceEEEEECC--------CHHHHHHHHHHhCCEEEeCcHHhCCCCCCCCeEEEEEcCCHHHHHHHHHHHH
Confidence 343 6788999999886 467888888776899999999987 368999999779999999999999
Q ss_pred HHHHHH
Q 014769 410 AFCQRH 415 (419)
Q Consensus 410 ~~~~~~ 415 (419)
++++++
T Consensus 370 ~~l~~~ 375 (376)
T 3ezs_A 370 TYRENH 375 (376)
T ss_dssp HHHCC-
T ss_pred HHHHhc
Confidence 988654
No 33
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=100.00 E-value=4.1e-46 Score=351.72 Aligned_cols=363 Identities=26% Similarity=0.426 Sum_probs=303.0
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++....+.+.++.+.....+ .. ..++++|+|+.|.+. ++.++.+.+++.+.+... ...|++..|..++|+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~~~~~~l~~~l 75 (370)
T 2z61_A 3 SKRLLNFESFEVMDILALAQK-LE-SEGKKVIHLEIGEPD----FNTPKPIVDEGIKSLKEG-KTHYTDSRGILELREKI 75 (370)
T ss_dssp CHHHHHCCCCTTHHHHHHHHH-HH-HTTCCCEECCCCSCS----SCCCHHHHHHHHHHHHTT-CCSCCCTTCCHHHHHHH
T ss_pred hhhhhhccccHHHHHHHHHHH-HH-hcCCCEEEccCCCCC----CCCCHHHHHHHHHHHHcC-ccCCCCCCCCHHHHHHH
Confidence 345566777788887765433 22 237889999999863 345789999999988764 34798888999999999
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
++++.+.+|..+++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.++ +|+++|
T Consensus 76 a~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~--------~d~~~l 147 (370)
T 2z61_A 76 SELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYKNFIRFLGAKPVFCD--------FTVESL 147 (370)
T ss_dssp HHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHHHTTCEEEEEC--------SSHHHH
T ss_pred HHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHHHHHHcCCEEEEeC--------CCHHHH
Confidence 999998888888999999999999999999999999999999999999999999999999988776 589999
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCC
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISK 252 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK 252 (419)
+++++++++++++++|+||||.++|.+ |.++|+++|+++|+||+|+.+.+++. ..++..+. ..++++++.|+||
T Consensus 148 ~~~l~~~~~~v~~~~p~nptG~~~~~~----l~~~~~~~~~~li~De~~~~~~~~g~-~~~~~~~~~~~~~~i~~~s~sK 222 (370)
T 2z61_A 148 EEALSDKTKAIIINSPSNPLGEVIDRE----IYEFAYENIPYIISDEIYNGLVYEGK-CYSAIEFDENLEKTILINGFSK 222 (370)
T ss_dssp HHHCCSSEEEEEEESSCTTTCCCCCHH----HHHHHHHHCSEEEEECTTTTCBSSSC-CCCGGGTCTTCSSEEEEEESTT
T ss_pred HHhcccCceEEEEcCCCCCcCcccCHH----HHHHHHHcCCEEEEEcchhhcccCCC-CcCHHHccCCCCcEEEEecChh
Confidence 999987888999999999999999955 99999999999999999999888663 33444442 3457899999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
.++++|+|+||+++++ ++++.++.... .+++++.+.|.++.++|+....+++++.+++++++++.+.+.|+
T Consensus 223 ~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~ 294 (370)
T 2z61_A 223 LYAMTGWRIGYVISND--------EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVLKYVK 294 (370)
T ss_dssp TTTCGGGCCEEEECCH--------HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCccceEEEEEECH--------HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988999999999865 57777776543 34578889999888888741156788889999999999999999
Q ss_pred cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
++ ++. +..|.+|+++|++++. +..++..+|++++||.+.||..|+. .+++|++++.+++++++++++|+
T Consensus 295 ~~-g~~-~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~gi~v~~g~~f~~~~~~~~Ri~~~~~~~~i~~~~~~l~ 365 (370)
T 2z61_A 295 DF-GWE-VNNPIGAYYVFPNIGE-------DGREFAYKLLKEKFVALTPGIGFGSKGKNYIRISYANSYENIKEGLERIK 365 (370)
T ss_dssp HT-TCB-CCCCCBTTEECCBCSS-------CHHHHHHHHHHHHCEECEEGGGGCGGGSSBEEEECCSCHHHHHHHHHHHH
T ss_pred Hc-CCe-ecCCCcceEEEEecCC-------CHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEeCCHHHHHHHHHHHH
Confidence 88 777 4478889999988863 4677888887678999999998874 68999999989999999999999
Q ss_pred HHHH
Q 014769 410 AFCQ 413 (419)
Q Consensus 410 ~~~~ 413 (419)
++++
T Consensus 366 ~~l~ 369 (370)
T 2z61_A 366 EFLN 369 (370)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 8874
No 34
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=100.00 E-value=1.5e-46 Score=361.98 Aligned_cols=383 Identities=18% Similarity=0.244 Sum_probs=299.7
Q ss_pred cCchhhhhCCch-hHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC----CCCCCCCCCCCC
Q 014769 12 EDKQEHKAAPAV-TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----GKFNCYATNSGI 86 (419)
Q Consensus 12 ~~~~~~~~~~~~-~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----~~~~~Y~~~~g~ 86 (419)
...++....+.. ....+.........+.+++++|+|+.|++. ++.++.+.+++.+++.. .....|++..|.
T Consensus 25 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~ 100 (432)
T 3ei9_A 25 SRNSNMSKLQAGYLFPEIARRRSAHLLKYPDAQVISLGIGDTT----EPIPEVITSAMAKKAHELSTIEGYSGYGAEQGA 100 (432)
T ss_dssp CCCHHHHHCCSSCHHHHHHHHHHHHHHHCTTCCCEECSSCCCC----SCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCC
T ss_pred ccChHHHhCCCCccHHHHHHHHHhhhhcCCCCCeEEccCCCCC----CCCCHHHHHHHHHHHhcccccCCccCCCCCCCC
Confidence 344555555553 555565555554445567899999999853 67889999999998763 223478888899
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCC------------E
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQV------------E 154 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~------------~ 154 (419)
.++|+++++++.+ +.++++++|++|+|+++++..+ ..++++||.|++++|+|+++...+...|. +
T Consensus 101 ~~l~~~ia~~~~~--~~~~~~~~i~~t~G~~~al~~l-~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~ 177 (432)
T 3ei9_A 101 KPLRAAIAKTFYG--GLGIGDDDVFVSDGAKCDISRL-QVMFGSNVTIAVQDPSYPAYVDSSVIMGQTGQFNTDVQKYGN 177 (432)
T ss_dssp HHHHHHHHHHHHT--TTTCCGGGEEEESCHHHHHHHH-HHHHCTTCCEEEEESCCTHHHHHHHHHTCSCCEETTTTEETT
T ss_pred HHHHHHHHHHHHc--cCCCCcceEEECCChHHHHHHH-HHHcCCCCEEEEeCCCCHHHHHHHHHcCCcccccccccccCc
Confidence 9999999999974 5567889999999999999975 77778999999999999999888887774 5
Q ss_pred EEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 155 VRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
+..++++.+.++..+++. .++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++.. .+
T Consensus 178 ~~~~~~~~~~~~~~~l~~-----~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~-~~ 251 (432)
T 3ei9_A 178 IEYMRCTPENGFFPDLST-----VGRTDIIFFCSPNNPTGAAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNP-RS 251 (432)
T ss_dssp CEEEECCGGGTTSCCGGG-----CCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCC-SS
T ss_pred eEEeccCcccCCcCChhh-----CCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCC-CC
Confidence 777887655455555443 247889999999999999999999999999999999999999999998877543 23
Q ss_pred ccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHH
Q 014769 235 MGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 235 ~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
+..+. ..+++++++|+||.|+++|+|+||++++++........+.+.+.... ...+++++++|.++.+++.....+++
T Consensus 252 ~~~~~~~~~~~i~~~S~SK~~g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~ 331 (432)
T 3ei9_A 252 IFEIPGAEEVAMETASFSNYAGFTGVRLGWTVIPKKLLYSDGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAM 331 (432)
T ss_dssp GGGSTTGGGTEEEEEESHHHHCTTTTCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHH
T ss_pred hhhcCCCCCeEEEEecchhccCCcccceEEEEEChHHhhcchHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHH
Confidence 33332 23568999999999999999999999976320000001255555543 23456788899988888864334678
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeE
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWL 390 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~ 390 (419)
++.+++++++++.+.+.|+++ ++. +..|.+++|+|+.++. .+..+++..+++++||.+.||..|+. .+++
T Consensus 332 ~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~------~~~~~~~~~ll~~~gv~v~~g~~f~~~~~~~i 403 (432)
T 3ei9_A 332 HKVIGFYKENTNIIIDTFTSL-GYD-VYGGKNAPYVWVHFPN------QSSWDVFAEILEKTHVVTTPGSGFGPGGEGFV 403 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TCC-EEECSSSSEEEEECTT------SCHHHHHHHHHHHHCEECEEGGGGCGGGTTEE
T ss_pred HHHHHHHHHHHHHHHHHHHHC-Cce-ecCCCcceEEEEECCC------CCHHHHHHHHHHHCCEEEeCchHhCCCCCCEE
Confidence 899999999999999999988 777 4466789999999873 25778888888888999999999875 6899
Q ss_pred EEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 391 RIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 391 Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
||+++.++++|++++++|++--+.+
T Consensus 404 Ris~~~~~e~l~~~l~rl~~~~~~~ 428 (432)
T 3ei9_A 404 RVSAFGHRENILEACRRFKQLYKHH 428 (432)
T ss_dssp EEECCSCHHHHHHHHHHHHHHHTTS
T ss_pred EEEecCCHHHHHHHHHHHHHHhhhc
Confidence 9999889999999999998765443
No 35
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=4.6e-47 Score=364.75 Aligned_cols=378 Identities=19% Similarity=0.274 Sum_probs=306.1
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCCCCCCCCCHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNCYATNSGIPPARR 91 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~Y~~~~g~~~lr~ 91 (419)
+++....+.+.++.++.. ..++++|||+.|.|.. ...+++.+.+++.+.+.... ...|+++.|..++|+
T Consensus 22 ~~~~~~~~~~~~~~~~~~-------~~~~~~idl~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~ 92 (425)
T 1vp4_A 22 SKIGQNMKSSIIREILKF-------AADKDAISFGGGVPDP--ETFPRKELAEIAKEIIEKEYHYTLQYSTTEGDPVLKQ 92 (425)
T ss_dssp CHHHHTCCCCCHHHHTTT-------TTSTTCEECCCCSCCG--GGSCHHHHHHHHHHHHHHSHHHHTSCCCTTCCHHHHH
T ss_pred hhhhhcCCCcHHHHHHHh-------ccCCCceeCCCCCCCc--ccCCHHHHHHHHHHHHhhcchhhcCCCCCCCCHHHHH
Confidence 444455555555554431 1256899999998753 23467889999988876431 347888889999999
Q ss_pred HHHHHHHhhCCCC-CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccCh
Q 014769 92 AIADYLSRDLPYK-LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170 (419)
Q Consensus 92 ~ia~~l~~~~~~~-~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (419)
++++++.+.+|.. +++++|++|+|+++++..++++++++||+|++++|+|+++...+...|.+++.++++++ ++|+
T Consensus 93 ~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---~~d~ 169 (425)
T 1vp4_A 93 QILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAINAFRQYLANFVVVPLEDD---GMDL 169 (425)
T ss_dssp HHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTTCEEEEEEEETT---EECH
T ss_pred HHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEEeccCCC---CCCH
Confidence 9999997766766 78899999999999999999999999999999999999999999999999999987642 4899
Q ss_pred HHHHHhhcC--------CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 171 DAVEALADK--------NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 171 ~~l~~~~~~--------~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
+.|++++++ ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++..
T Consensus 170 ~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~ 249 (425)
T 1vp4_A 170 NVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALRYEGETVDPIFKIGGP 249 (425)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCBCSSCCCCCHHHHHCT
T ss_pred HHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCCCCcCHHHhCCC
Confidence 999988865 56777 478999999999999999999999999999999999999998876655555555545
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTL 319 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~ 319 (419)
++++++.|+||.++ +|+|+||+++++ ++++.+.... ..+++++.+.|.++..+|+... .+++++.++++
T Consensus 250 ~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 320 (425)
T 1vp4_A 250 ERVVLLNTFSKVLA-PGLRIGMVAGSK--------EFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLEQLKPTIELY 320 (425)
T ss_dssp TTEEEEEESTTTTC-GGGCEEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHHHTHHHHHHH
T ss_pred CCEEEEeccccccc-cccceEEEeeCH--------HHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 67899999999988 999999999864 5777776654 2345678899999999998642 46788888999
Q ss_pred HHHHHHHHHHhhc-CC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEE
Q 014769 320 RESAEICYDGVKE-IP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLR 391 (419)
Q Consensus 320 ~~~~~~l~~~l~~-~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~R 391 (419)
+++++.+.+.|++ +| ++. +..|.+|+|+|++++.. .+..++...|+++ ||.+.||..|+. .+++|
T Consensus 321 ~~~~~~l~~~L~~~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~~-gi~v~~g~~f~~~~~~~~~iR 393 (425)
T 1vp4_A 321 RRKRTVMLNALEEYFSDIPGVK-WVKSEGGLFIWLTLPEG-----FDTWEMFEYAKRK-KVFYVPGRVFKVYDEPSPSMR 393 (425)
T ss_dssp HHHHHHHHHHHHHHSTTSTTCE-ECCCSBSSEEEEECCTT-----CCTTTTHHHHHHH-TEECEEGGGGCTTCCCCSEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceE-EecCCccEEEEEEcCCC-----CCHHHHHHHHHHC-CCEEECchhhcCCCCCCCeEE
Confidence 9999999999987 45 576 44688899999998742 1345677777655 999999998853 57999
Q ss_pred EEeec-CHHHHHHHHHHHHHHHHHHhccC
Q 014769 392 IAFCA-EPSALKDGLGRMKAFCQRHTKKH 419 (419)
Q Consensus 392 is~~~-~~~~l~~~l~~l~~~~~~~~~~~ 419 (419)
|+++. +++++++++++|+++++++.+++
T Consensus 394 is~~~~~~e~i~~~l~~l~~~l~~~~~~~ 422 (425)
T 1vp4_A 394 LSFCLPPDEKIVEGIKRLREVVLEYGKEK 422 (425)
T ss_dssp EECSSSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHHhhc
Confidence 99975 79999999999999998876653
No 36
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=100.00 E-value=5.3e-46 Score=353.56 Aligned_cols=351 Identities=19% Similarity=0.309 Sum_probs=301.3
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++|+|+.|++ .+++++.+.+++.+.+.... ..|++ +..++++++++++.+.+|..+++++|++|+|+++++
T Consensus 31 ~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~--~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~ 103 (391)
T 4dq6_A 31 TNDLLPMWVADM----DFKAAPCIIDSLKNRLEQEI-YGYTT--RPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAI 103 (391)
T ss_dssp CSCSEECCSSSC----SSCCCHHHHHHHHHHHTTCC-CCCBC--CCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCceeccccCC----CCCCCHHHHHHHHHHHhCCC-CCCCC--CCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHH
Confidence 678999999984 46778999999999987543 35665 569999999999999888788899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc--CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL--PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
..++.+++++||+|+++.|+|.++...++..|.+++.++++ .++++.+|++.+++++++ ++++++++|+||||.++|
T Consensus 104 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~ 182 (391)
T 4dq6_A 104 SLLINELTKANDKIMIQEPVYSPFNSVVKNNNRELIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWT 182 (391)
T ss_dssp HHHHHHHSCTTCEEEECSSCCTHHHHHHHHTTCEEEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhCCCCCEEEEcCCCCHHHHHHHHHcCCeEEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcC
Confidence 99999999999999999999999999999999999999987 445678999999999987 889999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
.+++++|+++|+++|+++|+||+|+.+.+++....++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 183 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~~------- 255 (391)
T 4dq6_A 183 KDELKKLGDICLKHNVKIISDEIHSDIILKKHKHIPMASISKEFEKNTITCMAPTKTFNIAGLQSSYVVLPDE------- 255 (391)
T ss_dssp HHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHHTEEEEECSHHHHTCGGGCCEEEECCSH-------
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccccccCCCCccCHHHcCccccCcEEEEEechhhccCcccceEEEEeCCH-------
Confidence 999999999999999999999999999988766666666554 36789999999999899999999998652
Q ss_pred hHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecC
Q 014769 277 GIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLN 353 (419)
Q Consensus 277 ~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~ 353 (419)
++++.++.... ..++++.+.+.++..+++. ..+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~~~~~ 333 (391)
T 4dq6_A 256 KDYKLLDDAFTRIDIKRNNCFSLVATEASYNN-GESWLESFLEYLESNIDFAIKYINENMPKLK-VRKPEGTYLLWVDFS 333 (391)
T ss_dssp HHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCTTSE-ECCCSBSSEEEEECG
T ss_pred HHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhc-hHHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-ecCCCccEEEEEEhh
Confidence 46677766532 2346788888888888875 3567888999999999999999987 78888 558889999999887
Q ss_pred cccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 354 PWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 354 ~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
... .+..++...|++++||.+.||..|+. .+++|++++.+++++++++++|++++
T Consensus 334 ~~~----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 334 ALG----LSDEELESILVQKGKVALNQGNSFGIGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GGC----CCHHHHHHHHHHTTCEECEEGGGGCTTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hcC----CCHHHHHHHHHHhCCEEeeCchhhCCCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 421 25778888886666999999998876 48999999989999999999999876
No 37
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=5.3e-46 Score=353.50 Aligned_cols=353 Identities=20% Similarity=0.260 Sum_probs=294.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH-HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP-ARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~-lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+++|+|+.|++. +++++.+.+++.+.+... ...|++. ..+ +|+++++++.+.+|..+++++|++|+|+++++
T Consensus 28 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al 100 (390)
T 1d2f_A 28 ADLLPFTISDMD----FATAPCIIEALNQRLMHG-VFGYSRW--KNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMV 100 (390)
T ss_dssp --CEECCSSSCS----SCCCHHHHHHHHHHHTTC-CCCCCCS--CCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHH
T ss_pred CCeeEeeecCCC----CCCCHHHHHHHHHHHhCC-CCCCCCC--ChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHH
Confidence 478999999853 567899999999988653 3478774 678 99999999998888778899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC-CcccChHHHHHhhcC-CccEEEEeCCCCccccCCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER-NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~ 198 (419)
+.++++++++||+|+++.|+|+++...++..|.+++.+++++++ +|.+|++.|++++++ ++++|++++|+||||.++|
T Consensus 101 ~~~~~~l~~~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~ 180 (390)
T 1d2f_A 101 SELIRQWSETGEGVVIHTPAYDAFYKAIEGNQRTVMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWT 180 (390)
T ss_dssp HHHHHHSSCTTCEEEEEESCCHHHHHHHHHTTCEEEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHhcCCCCEEEEcCCCcHHHHHHHHHCCCEEEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcC
Confidence 99999999999999999999999999999999999999886543 567999999999876 6888899999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
.+++++|+++|+++|+++|+||+|+.+.+++..+.++..+.....-. +.|+||.++++|+|+||++++++ ++
T Consensus 181 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~d~-~~s~sK~~~~~G~r~G~~~~~~~-------~~ 252 (390)
T 1d2f_A 181 CDELEIMADLCERHGVRVISDEIHMDMVWGEQPHIPWSNVARGDWAL-LTSGSKSFNIPALTGAYGIIENS-------SS 252 (390)
T ss_dssp TTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCCCCGGGTCCSSEEE-EECSHHHHTCGGGCCEEEEECSH-------HH
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcCHHHcchhhHhh-ccCccHhhcccChhheEEEECCH-------HH
Confidence 99999999999999999999999999988776555555554321013 88999999889999999998642 46
Q ss_pred HHHHHhhhc--cc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCc
Q 014769 279 IDSIKDCLS--IY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 279 ~~~l~~~~~--~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++.++.... .. ++++.+.+.++..+++.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++.
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~-~~~~~~~~~~~~~~~~ 330 (390)
T 1d2f_A 253 RDAYLSALKGRDGLSSPSVLALTAHIAAYQQG-APWLDALRIYLKDNLTYIADKMNAAFPELN-WQIPQSTYLAWLDLRP 330 (390)
T ss_dssp HHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHCSSCC-CCCCSBCSEEEEECGG
T ss_pred HHHHHHHHhhhcccCCCCHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHhhCCCCE-EecCCccEEEEEEccc
Confidence 677765543 23 377888888888888753 567888899999999999999998 78887 4478888999998864
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.. .+..++...|++++||.+.||..|+ .++++||+++.+++++++++++|+++++++
T Consensus 331 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~~ 389 (390)
T 1d2f_A 331 LN----IDDNALQKALIEQEKVAIMPGYTYGEEGRGFVRLNAGCPRSKLEKGVAGLINAIRAV 389 (390)
T ss_dssp GC----CCHHHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHHHHH
T ss_pred cC----CCHHHHHHHHHHHcCEEeeCccccCCCCCCeEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 21 1467788888667899999999886 368999999888899999999999999875
No 38
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=100.00 E-value=1.3e-45 Score=352.84 Aligned_cols=378 Identities=22% Similarity=0.296 Sum_probs=309.4
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
+++....+++.++.+.....+ .. ..++++|+|+.|.+. ++.++.+.+++ +.+... ...|++..|..++|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~-~~-~~g~~~i~l~~~~~~----~~~~~~v~~a~-~~l~~~-~~~y~~~~g~~~l~~~l 88 (409)
T 2gb3_A 17 SDRVLLTEESPIRKLVPFAEM-AK-KRGVRIHHLNIGQPD----LKTPEVFFERI-YENKPE-VVYYSHSAGIWELREAF 88 (409)
T ss_dssp CHHHHSCCCCTTGGGHHHHHH-HH-HTTCEEEECSSCCCC----SCCCTHHHHHH-HHTCCS-SCCCCCTTCCHHHHHHH
T ss_pred HHHhhcCCccHHHHHHHHHHH-HH-hcCCCEEeccCCCCC----CCCCHHHHHHH-HHHhcC-CCCCCCCCCcHHHHHHH
Confidence 445566667777777664433 22 237889999999863 44578899999 887653 34798888999999999
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
++++.+.+|.++++++|++|+|+++++..++.++.++||+|+++.|+|+++...+...|.+++.+++++++++.+ ++.|
T Consensus 89 a~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~-~~~l 167 (409)
T 2gb3_A 89 ASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNAFAKIAGVKLIPVTRRMEEGFAI-PQNL 167 (409)
T ss_dssp HHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHHHHHHHTCEEEEEECCGGGTSCC-CTTG
T ss_pred HHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEeccCCCCCCcc-HHHH
Confidence 999998888888899999999999999999999999999999999999999999999999999998865345555 8889
Q ss_pred HHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc
Q 014769 174 EALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR 253 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~ 253 (419)
+++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++.....+..+ .+++++++|+||.
T Consensus 168 ~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~ 245 (409)
T 2gb3_A 168 ESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFASALSIE--SDKVVVIDSVSKK 245 (409)
T ss_dssp GGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSC--CTTEEEEEESTTT
T ss_pred HHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCCccccC--CCCEEEEecchhc
Confidence 98888788999999999999999999999999999999999999999999988766322212111 3468999999999
Q ss_pred CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
++++|+|+||++++++ ++++.++.......+++.+.+.++..+|+.. ..++++.+++++++++.+.+.|+++
T Consensus 246 ~g~~G~r~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~L~~~ 317 (409)
T 2gb3_A 246 FSACGARVGCLITRNE-------ELISHAMKLAQGRLAPPLLEQIGSVGLLNLD-DSFFDFVRETYRERVETVLKKLEEH 317 (409)
T ss_dssp TTCGGGCCEEEECSCH-------HHHHHHHHHHHHSCCCCHHHHHHHHHHHTCC-HHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCccceEEEEEECcH-------HHHHHHHHHHhccCCCCHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9889999999998641 3666666554321177888999998999653 5778888999999999999999988
Q ss_pred CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh-----cCeEeecCCCCCC-----CCeEEEEeecCHHHHHH
Q 014769 334 PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE-----ESVIVTPGIYVGL-----KNWLRIAFCAEPSALKD 403 (419)
Q Consensus 334 ~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~-----~gv~v~~g~~~~~-----~~~~Ris~~~~~~~l~~ 403 (419)
++.++..|.+|+++|++++. .+..++...|+++ +||.+.||..|+. .+++|++++.+++++++
T Consensus 318 -g~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~~~~~~~~~~iRis~~~~~e~i~~ 390 (409)
T 2gb3_A 318 -GLKRFTKPSGAFYITAELPV------EDAEEFARWMLTDFNMDGETTMVAPLRGFYLTPGLGKKEIRIACVLEKDLLSR 390 (409)
T ss_dssp -TCCCBCCCSBSSEEEEECSS------SCHHHHHHHHHHSCCBTTEEEECEEGGGGCSSTTTTSSEEEEECCSCHHHHHH
T ss_pred -CceeeeCCCeeEEEEEEeCC------CCHHHHHHHHHhccccccCcEEEeCchHhCCCCCCCCCEEEEEeCCCHHHHHH
Confidence 77741478889999998861 2567888888666 5999999988854 67999999999999999
Q ss_pred HHHHHHHHHHHHhc
Q 014769 404 GLGRMKAFCQRHTK 417 (419)
Q Consensus 404 ~l~~l~~~~~~~~~ 417 (419)
++++|+++++++.+
T Consensus 391 ~~~~l~~~l~~~~~ 404 (409)
T 2gb3_A 391 AIDVLMEGLKMFCS 404 (409)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhh
Confidence 99999999988754
No 39
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=100.00 E-value=2.2e-46 Score=359.38 Aligned_cols=385 Identities=15% Similarity=0.146 Sum_probs=300.1
Q ss_pred ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCH
Q 014769 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIP 87 (419)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~ 87 (419)
|+.-...+..+..++.+..++....+..++..+.++|+|+.|+|. ..+.+++++.+.+++.+.... ....|++..|.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~y~~~~g~~ 83 (418)
T 3rq1_A 5 TSVAAKHAKGKKLKDVIFVTAGQAQADAKENGRENVVNGTLGAIHDEEGNLVFLKTVKEEYLSLSDS-EHVGYAPIAGIP 83 (418)
T ss_dssp CCCSCTTTTTCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSSCCBCTTSCBCCCHHHHHHHHTCCHH-HHHSCCCTTCCH
T ss_pred hhhhHhhcCCCCCCchHHHHHHHHHhhhhhhcCCCeEECCCCcccCCCCCccccHHHHHHHHHhccc-ccCCCCCCCChH
Confidence 344445555677788888888877665544457799999999872 123467888888887654322 234799889999
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (419)
++|+++++++.+..+.. .+++|++|+|+++++..++++++++||+|+++.|+|..+...+...|.+++.+++++++ +.
T Consensus 84 ~lr~~ia~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~-~~ 161 (418)
T 3rq1_A 84 DFLCAAEKECFGNFRPE-GHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYRVICSDTGRTLVTYSLFDEH-NN 161 (418)
T ss_dssp HHHHHHHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHHHHHHHTTCEEEEECSBCTT-SS
T ss_pred HHHHHHHHHHhcccCcc-ccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHHHHHHHcCCEEEEEeeeCCC-CC
Confidence 99999999997654422 23399999999999999999999999999999999999999999999999999986543 68
Q ss_pred cChHHHHHhhcC----Ccc-EEEEeCC-CCccccCCCHHHHHHHHHHHH------hCCCeEEEcccccccccCCCCCCCc
Q 014769 168 VDLDAVEALADK----NTA-AMVIINP-GNPCGNVFTYHHLQEIAEMAR------KLRVMVVADEVYGHLTFGSIPYTPM 235 (419)
Q Consensus 168 ~~~~~l~~~~~~----~~~-~v~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~ 235 (419)
+|++.+++++++ +++ ++++++| +||||.+++.+++++|+++|+ ++|+++|+||+|.++.+++....++
T Consensus 162 ~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~ 241 (418)
T 3rq1_A 162 FNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVAYLDYSGEKDEVRAF 241 (418)
T ss_dssp BCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECTTGGGSSCHHHHHGG
T ss_pred cCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccCChHHHHHH
Confidence 999999998874 555 6788899 999999999999999999999 8999999999999988765432222
Q ss_pred c-ccCC-CCc--EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-----cccCCchHHHHHHHHHHcc
Q 014769 236 G-LFGS-IVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILEK 306 (419)
Q Consensus 236 ~-~~~~-~~~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~~ 306 (419)
. .... .++ +++++||||.++++|+|+||+++... ++++++.+..... .+.+++.++|.++..+++.
T Consensus 242 ~~~~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 316 (418)
T 3rq1_A 242 FNKFSHLPKEILTCVCYSLSKGFTMYGQRVGAMIGISD-----DEEIADEFFEVNKSTSRATWSNICRPAMRTMANIVAD 316 (418)
T ss_dssp GGGGTTCCTTEEEEEEEESTTTTTCCSSCCEEEEEEES-----SHHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCceEEEEEeCCCCCcCcCCcceEEEEEeC-----CHHHHHHHHHHHHHHHhhccCCCchHHHHHHHHHhCC
Confidence 2 2221 223 58899999999999999999998210 0157777765432 1245788899999888876
Q ss_pred cc-----hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769 307 TK-----EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 307 ~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
.. .+..++.+++++++++.+.+.|+++ ++. +..|.+++|+|++++ +..++... |.++||.+.||
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~-l~~~gi~v~~g 385 (418)
T 3rq1_A 317 PAKFKEYEAERNCYYQLIRDRADIFKQEAAQV-GLP-MLPYRGGFFITIPTD--------SANAICEE-LKKEHIYVIAL 385 (418)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCC-CCCCCSSSEEEEECT--------THHHHHHH-HHHTTEECEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCCCceEEEEcCCC--------CHHHHHHH-HHhCCEEEecC
Confidence 32 1234466788899999999999887 777 458899999998774 46677765 47889999998
Q ss_pred CCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 382 IYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 382 ~~~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+++||+++ .+++++++++++|+++++++.+
T Consensus 386 -----~~~iRis~~~~~~~~i~~~~~~l~~~l~~~~~ 417 (418)
T 3rq1_A 386 -----ANGIRIAACGIPKCQMTGLAEKIYNAMKSLGK 417 (418)
T ss_dssp -----SSEEEEEGGGSCHHHHTTHHHHHHHHHHHTTC
T ss_pred -----CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhc
Confidence 468999997 5999999999999999987643
No 40
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=100.00 E-value=6.3e-46 Score=358.33 Aligned_cols=371 Identities=18% Similarity=0.185 Sum_probs=306.6
Q ss_pred CCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHh
Q 014769 20 APAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSR 99 (419)
Q Consensus 20 ~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~ 99 (419)
.....++.+.... ..+.+..++++|+|+.|.+. +++++.+++++.+.+.......|++..|..++|+++++++.+
T Consensus 23 ~~~~~~~~~~~~~-~~~~~~~g~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~~~~ 97 (437)
T 3g0t_A 23 LGMASIRDLVALV-TNLEKATGTKFCRMEMGVPG----LPAPQIGIETEIQKLREGVASIYPNLDGLPELKQEASRFAKL 97 (437)
T ss_dssp GGGCCHHHHHHHH-HHHHHHHTCCCEECCCCSCC----SCCCHHHHHHHHHHHHHTGGGSCCCTTCCHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHH-HHHHHhcCCCEEeccCcCCC----CCCCHHHHHHHHHHHhCCcCcCCCCCCChHHHHHHHHHHHHH
Confidence 3455566666543 33334458899999999863 567899999999988754436899988999999999999998
Q ss_pred hCCCCCCCCcEEEcccHHHHHHHHHHHhc--CCCC--eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH
Q 014769 100 DLPYKLSADDVYVTLGCKQAVEVILSVLA--RPGA--NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA 175 (419)
Q Consensus 100 ~~~~~~~~~~i~~t~g~~~al~~~~~~l~--~~gd--~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (419)
.+|..+++++|++|+|+++++..++.+++ ++|| +|++++|+|.++...++..|.+++.++++ ++++.+|++.+++
T Consensus 98 ~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~ 176 (437)
T 3g0t_A 98 FVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKLQCRILGQKFESFDLF-EYRGEKLREKLES 176 (437)
T ss_dssp HHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHHHHHHHTCCCEEEEGG-GGCTTHHHHHHHH
T ss_pred hhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHHHHHHcCCEEEEEeec-CCCCccCHHHHHH
Confidence 88888899999999999999999999998 9999 99999999999999999999999999986 4566789999999
Q ss_pred hh-cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC----Cc-cccCC-CCcEEEEe
Q 014769 176 LA-DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT----PM-GLFGS-IVPVITLG 248 (419)
Q Consensus 176 ~~-~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~----~~-~~~~~-~~~~i~~~ 248 (419)
++ +++++++++++|+||||.+++.+++++|+++|+++|+++|+|++|+.+.+++.... ++ ..+.. .++++++.
T Consensus 177 ~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 256 (437)
T 3g0t_A 177 YLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRKDYSHPGEPLYQPSVANYTDNYILAL 256 (437)
T ss_dssp HHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTSCCCSTTSSCCCCCGGGTCSCEEEEE
T ss_pred HHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCCCcCcccccchhhccCCCCCcEEEEE
Confidence 99 66889999999999999999999999999999999999999999999887632211 11 33333 56789999
Q ss_pred cCCCcCCCCCceeEEEEeeCCCCccchhhHHH-H-----------------HHhhh-ccccCCchHHHHHHHHHHcccch
Q 014769 249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIID-S-----------------IKDCL-SIYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~-~-----------------l~~~~-~~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
|+||.++++|+|+||+++++ ++++ . +.... ..+++++.+.+.++..+++.. .
T Consensus 257 s~sK~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~ 327 (437)
T 3g0t_A 257 SSSKAFSYAGQRIGVLMISG--------KLYEREYPDLEESFGRLRFGEALSSSALYALSSGATHSAQWGMAAMLKAC-N 327 (437)
T ss_dssp ESTTTTSCGGGCCEEEEECH--------HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHSSSCHHHHHHHHHHHHHH-H
T ss_pred cCccCCCCccceeEEEEECH--------HHhhhhhhcccccccccchhHHHHHHHHhhhcCCCCHHHHHHHHHHHhCc-H
Confidence 99999988999999999865 4666 5 55443 235678899999999988762 1
Q ss_pred HH---HHHHHHHHHHHHHHHHHHhhcCCCCCCCC------CC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769 310 DF---FCKLIDTLRESAEICYDGVKEIPCISCPN------KP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379 (419)
Q Consensus 310 ~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~------~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 379 (419)
.+ +++.+++++++++.+.+.|+++ ++. +. .| .+++|+|++++. .+..++...|+ ++||.+.
T Consensus 328 ~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~l~~~L~-~~gi~v~ 398 (437)
T 3g0t_A 328 DGEYNFRDSVIEYGRKARIMKKMFLDN-GFN-IVYDKDGNEPLADGFYFTVGYKG------MDSSKLIEKFV-RYGMCAI 398 (437)
T ss_dssp TTSCCHHHHHHHHHHHHHHHHHHHHTT-TEE-ESSCEETTEECCSSSEEEEEETT------CCHHHHHHHHH-HTTEECE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHc-CCE-EeccccCCCCCceeEEEEEecCC------CCHHHHHHHHH-HcCeEEe
Confidence 22 8888999999999999999998 777 43 24 889999999872 25778887775 5699999
Q ss_pred cCCCCCCC--CeEEEEeec-CHHHHHHHHHHHHHHHHH
Q 014769 380 PGIYVGLK--NWLRIAFCA-EPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 380 ~g~~~~~~--~~~Ris~~~-~~~~l~~~l~~l~~~~~~ 414 (419)
|+..|+.. +++||+++. +++++++++++|++++++
T Consensus 399 ~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 399 TLKTTGSKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp ESTTTTCCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred eccccCCCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 99988763 789999964 899999999999998764
No 41
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=100.00 E-value=4e-46 Score=357.73 Aligned_cols=353 Identities=17% Similarity=0.265 Sum_probs=302.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
++++|+|+.|++ .++.+|.+.+++.+++.... ..|++. ..++++++++++.+.++..+++++|++|+|+++++
T Consensus 60 g~~~i~~~~~~~----~~~~~~~v~~a~~~~~~~~~-~~y~~~--~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~ 132 (421)
T 3l8a_A 60 NPELLQMWVADM----DFLPVPEIKEAIINYGREHI-FGYNYF--NDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAI 132 (421)
T ss_dssp CTTCEECCSSCC----CSCCCHHHHHHHHHHHHHCC-SSCBCC--CHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHH
T ss_pred CCCeeecccCCC----CCCCCHHHHHHHHHHHhcCC-cCCCCC--CHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHH
Confidence 678999999974 46788999999999887543 367664 38999999999999888888899999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc-CCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~ 198 (419)
+.++++++++||+|+++.|+|+++...+...|.+++.++++ .+.++.+|++.|+++++ ++++++++++|+||||.+++
T Consensus 133 ~~a~~~~~~~gd~Vi~~~~~y~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~ 212 (421)
T 3l8a_A 133 SIALQAFSEKGDAVLINSPVYYPFARTIRLNDHRLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWD 212 (421)
T ss_dssp HHHHHHHSCTEEEEEEEESCCHHHHHHHHHTTEEEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCC
T ss_pred HHHHHHhcCCCCEEEECCCCcHHHHHHHHHCCCEEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCC
Confidence 99999999999999999999999999999999999999986 45567899999999997 68899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
.+++++|.++|+++|+++|+||+|+++.+++....++..+.. .++++++.|+||.++++|+|+||++++++
T Consensus 213 ~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~~~G~~~~~~~------- 285 (421)
T 3l8a_A 213 NDDLIKIAELCKKHGVILVSDEIHQDLALFGNTHHSLNTLDASYKDFTIILSSATKTFNIAGTKNSFAIIQNE------- 285 (421)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCTTGGGTEEEEECSHHHHTCGGGCCEEEECCSH-------
T ss_pred HHHHHHHHHHHHHcCCEEEEEccccccccCCCCCccHHHcCchhcCcEEEEEeChhhccCchhheEeEEcCCH-------
Confidence 999999999999999999999999999988876666666543 36789999999999889999999998742
Q ss_pred hHHHHHHhhh-c-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 277 GIIDSIKDCL-S-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 277 ~~~~~l~~~~-~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++.+.+.... . ..++++++++.++.++++. ..+++++..++++++++.+.+.|+++|++. +..|.++++.|+.++.
T Consensus 286 ~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~i~-~~~~~~~~~~~v~~~~ 363 (421)
T 3l8a_A 286 SLRRKFQYRQLANNQHEVPTVGMIATQAAFQY-GKPWLEELKTVIEGNIKLVIKELEAKTKIK-VMEPEGTYLVWLDFSA 363 (421)
T ss_dssp HHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHHHCSCE-EECCSBSSEEEEECGG
T ss_pred HHHHHHHHHHHhcccCCCCHHHHHHHHHHHhc-cHHHHHHHHHHHHHHHHHHHHHHHhCCCce-EeCCCeeEEEEEeccc
Confidence 5777776654 2 2347888999998888875 357789999999999999999998877888 4488999999999875
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.. .+..++...|++++||.+.||..|+. .+++||+++.++++|++++++|+++++
T Consensus 364 ~~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 364 YA----IAQPQLSEKLQNEAKVVLNDGAHFGKEGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GT----CCTTHHHHHHHHTTCEECEEGGGGCGGGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred cC----CCHHHHHHHHHHhCCEEEECchhhCCCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 21 14567888887788999999998875 689999999899999999999998875
No 42
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=100.00 E-value=5.9e-46 Score=353.97 Aligned_cols=375 Identities=20% Similarity=0.276 Sum_probs=303.0
Q ss_pred ccccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCC
Q 014769 9 WGFEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGI 86 (419)
Q Consensus 9 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~ 86 (419)
|+...+++........++.+.... .++++|||+.|.|.. ...+++.+.+++.+++... ....|+++.|.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~i~l~~g~~~~--~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~~ 76 (397)
T 2zyj_A 6 WSEAFGKGAGRIQASTIRELLKLT-------QRPGILSFAGGLPAP--ELFPKEEAAEAAARILREKGEVALQYSPTEGY 76 (397)
T ss_dssp HHHHSCGGGGGCCCCHHHHHHHHH-------TSTTCEEESSCCCCG--GGCCHHHHHHHHHHHHHHHHHHHTSCCCTTCC
T ss_pred HHHHhhhhhcccCchHHHHHHhhc-------cCCCceecCCCCCCc--hhCCHHHHHHHHHHHHHhcchhhhCCCCCCCC
Confidence 444455555555556666655421 156789999998753 2335788999988887542 13478887899
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCc
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNW 166 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~ 166 (419)
.++|+++++++ ++++++|++|+|+++++..++.+++++||+|++++|+|+++...++..|.+++.++++++
T Consensus 77 ~~l~~~la~~~------g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~--- 147 (397)
T 2zyj_A 77 APLRAFVAEWI------GVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAIQAFRLQGPRFLTVPAGEE--- 147 (397)
T ss_dssp HHHHHHHHHHH------TSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHHHHHHTTCCEEEEEEEETT---
T ss_pred HHHHHHHHHHh------CCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHHHHHHHcCCEEEecCcCCC---
Confidence 99999999999 467889999999999999999999999999999999999999999999999999887542
Q ss_pred ccChHHHHHhhcC-CccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC---
Q 014769 167 EVDLDAVEALADK-NTAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI--- 241 (419)
Q Consensus 167 ~~~~~~l~~~~~~-~~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~--- 241 (419)
++|++++++++++ ++++| ++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++....++..++.+
T Consensus 148 ~~d~~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~ 227 (397)
T 2zyj_A 148 GPDLDALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGY 227 (397)
T ss_dssp EECHHHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTC
T ss_pred CCCHHHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCC
Confidence 4899999998875 67877 468999999999999999999999999999999999999998876655555555544
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLR 320 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 320 (419)
+++++++|+||.++ +|+|+||+++++ ++++.++... ...++.+.+.|.++..+|+....+++++.+++++
T Consensus 228 ~~~i~~~s~sK~~~-~G~r~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 298 (397)
T 2zyj_A 228 PGVIYLGSFSKVLS-PGLRVAFAVAHP--------EALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYR 298 (397)
T ss_dssp CCEEEEEESTTTTC-GGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred CeEEEEeccccccc-ccceeEEEecCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 67899999999988 999999999864 5777776653 2345668889999999998632256888889999
Q ss_pred HHHHHHHHHhhc-CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC----CCCeEEEEe
Q 014769 321 ESAEICYDGVKE-IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG----LKNWLRIAF 394 (419)
Q Consensus 321 ~~~~~l~~~l~~-~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~----~~~~~Ris~ 394 (419)
++++.+.+.|++ +| ++. +..|.+|+|+|++++.. .+..++...|++ +||.+.||..|+ .++++||++
T Consensus 299 ~~~~~l~~~L~~~~~~g~~-~~~~~~g~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~g~~f~~~~~~~~~iRis~ 371 (397)
T 2zyj_A 299 EKAQAMLHALDREVPKEVR-YTRPKGGMFVWMELPKG-----LSAEGLFRRALE-ENVAFVPGGPFFANGGGENTLRLSY 371 (397)
T ss_dssp HHHHHHHHHHHHHSCTTSE-ECCCSBSSEEEEECSTT-----CCHHHHHHHHHH-TTEEEEESGGGCTTSCCTTEEEEEC
T ss_pred HHHHHHHHHHHHHCCCCeE-EccCCccEEEEEEcCCC-----CCHHHHHHHHHH-CCCEEechHHhcCCCCCCCeEEEEc
Confidence 999999999987 57 576 44788899999998742 246778877755 599999999885 358999999
Q ss_pred ec-CHHHHHHHHHHHHHHHHHHhc
Q 014769 395 CA-EPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 395 ~~-~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+. +++++++++++|+++++++.+
T Consensus 372 ~~~~~~~i~~~~~~l~~~l~~~~~ 395 (397)
T 2zyj_A 372 ATLDREGIAEGVRRLGRALKGLLA 395 (397)
T ss_dssp SSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHh
Confidence 65 799999999999999988754
No 43
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=100.00 E-value=5.5e-46 Score=356.66 Aligned_cols=371 Identities=18% Similarity=0.166 Sum_probs=294.6
Q ss_pred cCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHH
Q 014769 12 EDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPP 88 (419)
Q Consensus 12 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~ 88 (419)
+..++....+++.|+.++..+.+ ...+++|||+.| +|. ...++++.+++++.+.+.......|++..|..+
T Consensus 23 ~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~G~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~ 96 (420)
T 4f4e_A 23 SLFSAVELAPRDPILGLNEAFNA----DTRPTKVNLGVGVYTNED--GKIPLLRAVRDAEKARVEAGLPRGYLPIDGIAA 96 (420)
T ss_dssp CTTTTCCCCCCCHHHHHHHHHHH----CCCSSCEECCCCSCCCTT--SCCCCCHHHHHHHHHHHHTCCCCCCCCTTCCHH
T ss_pred CHhhcCCcCCCChHHHHHHHHHh----cCCCCcEEeeeeeeECCC--CCccCcHHHHHHHHHHhccCCCCCCCCCCCcHH
Confidence 34556667788888888876543 335689999999 554 234566999999999988755568999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCC--cEEEcccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC
Q 014769 89 ARRAIADYLSRDLPYKLSAD--DVYVTLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER 164 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 164 (419)
+|+++++++....+..++++ +|++|+|+++++..++ ..++++||+|++++|+|.++...++..|.+++.+++..++
T Consensus 97 lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~v~~~~~~ 176 (420)
T 4f4e_A 97 YDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHRALFDMAGFEVVAYPYYDAK 176 (420)
T ss_dssp HHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHTTCCEEEEECEETT
T ss_pred HHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHHHHHHHcCCeEEEeeeeccc
Confidence 99999999976544444678 8999999999999994 4567899999999999999999999999999999985445
Q ss_pred CcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCcccc-C
Q 014769 165 NWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLF-G 239 (419)
Q Consensus 165 ~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~ 239 (419)
++.+|++.+++.++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|.++.+++. ...++..+ +
T Consensus 177 ~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~ 256 (420)
T 4f4e_A 177 TNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQGFGESIEADAAAVRLFAA 256 (420)
T ss_dssp TTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCTTGGGHHHHHHHH
T ss_pred cCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEccccccccCCcchhhHHHHHHHh
Confidence 67899999999987 5678888999999999999999999999999999999999999999988752 22233222 2
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH----HHHhhh-ccccCCchHHHHHHHHHHcccc-----h
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID----SIKDCL-SIYSDIPTFIQGAIPQILEKTK-----E 309 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~----~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~ 309 (419)
..+++++++|+||.|+++|+|+||+++.... +++++ .++... ..+.+++...|.++..++.... .
T Consensus 257 ~~~~~i~~~S~SK~~~~~G~RiG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~ 331 (420)
T 4f4e_A 257 ANLNVFVSSSFSKSFSLYGERVGALSIITDS-----KDEAARVLSQLKRVIRTNYSNPPTHGGAIVAAVLASPELRASWV 331 (420)
T ss_dssp TTCCEEEEEECTTTTTCGGGCEEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHCHHHHHHHH
T ss_pred cCCCEEEEEeCCccCcCcCCCcEEEEEEcCC-----HHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHhcCHHHHHHHH
Confidence 3467899999999999999999999753211 13333 333322 2345567888888888887632 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
+++++++++++++++.+.+.|+++ +++. +..|++|+|+|+.++ . +.+..+++++||.+.|+.
T Consensus 332 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gI~v~~~~---- 396 (420)
T 4f4e_A 332 QELGEMRDRIRAMRNGLVERLKAAGIERDFS-FINAQRGMFSYSGLT---------S-AQVDRLREEFGIYAVSTG---- 396 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHSCSSEEECCCC---------H-HHHHHHHHHHCEECCTTS----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCce-eECCCccEEEEeCCC---------H-HHHHHHHHhCCEEecCCC----
Confidence 567888999999999999999986 3666 447889999998763 2 345667788999999863
Q ss_pred CCeEEEEeec-CHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAFCA-EPSALKDGLGRMKAFC 412 (419)
Q Consensus 387 ~~~~Ris~~~-~~~~l~~~l~~l~~~~ 412 (419)
|++++. +++++++++++|++++
T Consensus 397 ----Ris~~~~~~~~i~~~~~~l~~~l 419 (420)
T 4f4e_A 397 ----RICVAALNTRNLDVVANAIAAVL 419 (420)
T ss_dssp ----EEEGGGCCTTTHHHHHHHHHHHH
T ss_pred ----eEEEecCCHHHHHHHHHHHHHHh
Confidence 999964 7888999999999876
No 44
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=100.00 E-value=3.9e-45 Score=346.44 Aligned_cols=361 Identities=27% Similarity=0.418 Sum_probs=290.8
Q ss_pred hhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 15 QEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 15 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
++........++.+.. +.. .+++|+|+.|.|. ++.++.+.+++.+++.. ...|+++.|..++|++++
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~------~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~~~~l~~~la 71 (381)
T 1v2d_A 5 PRTEAAKESIFPRMSG-LAQ------RLGAVNLGQGFPS----NPPPPFLLEAVRRALGR--QDQYAPPAGLPALREALA 71 (381)
T ss_dssp GGGGGC---CHHHHHH-HHH------HHTCEECCCCSCS----SCCCHHHHHHHHHHTTT--SCSCCCTTCCHHHHHHHH
T ss_pred hhhhhcCccHHHHHHH-HHh------cCCeEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCCCCCCHHHHHHHH
Confidence 3444444444544443 222 2468999999863 45689999999998865 457998889999999999
Q ss_pred HHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc--CCCCcccChHH
Q 014769 95 DYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL--PERNWEVDLDA 172 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~--~~~~~~~~~~~ 172 (419)
+++ ++++++|++|+|+++++..++.++.++||+|++++|+|+++...++..|.+++.++++ ++ ++.+|++.
T Consensus 72 ~~~------~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~-~~~~d~~~ 144 (381)
T 1v2d_A 72 EEF------AVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYLPDAFLAGAKARLVRLDLTPE-GFRLDLSA 144 (381)
T ss_dssp HHH------TSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHHHHTTCEEEEEECEEETT-EEECCHHH
T ss_pred Hhc------CCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHHHHHHcCCEEEEEeCCCCCc-cCCcCHHH
Confidence 997 6778899999999999999999999999999999999999999999999999999875 22 46799999
Q ss_pred HHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 173 VEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 173 l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+ +....++..+ ..+.++++.|+||
T Consensus 145 l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~-g~~~~~~~~~-~~~~~~~~~s~sK 222 (381)
T 1v2d_A 145 LEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYY-GERPRRLREF-APERTFTVGSAGK 222 (381)
T ss_dssp HHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBS-SSCCCCHHHH-CTTTEEEEEEHHH
T ss_pred HHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCcccccc-CCCCCCHHHh-cCCCEEEEeechh
Confidence 9999988889999999999999999999999999999999999999999999877 4333344333 3457899999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l 330 (419)
.++++|+|+||+++++ ++++.++.... .+++++.+.|.++..+|+... .+++++.+++++++++.+.+.|
T Consensus 223 ~~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~L 294 (381)
T 1v2d_A 223 RLEATGYRVGWIVGPK--------EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRRDLLAGGL 294 (381)
T ss_dssp HTTCGGGCCEEEECCT--------TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcccceEEEEeCH--------HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9988999999999865 45666655432 356778888988888887532 4678888999999999999999
Q ss_pred hcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----CCeEEEEeecCHHHHHHHHH
Q 014769 331 KEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----KNWLRIAFCAEPSALKDGLG 406 (419)
Q Consensus 331 ~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----~~~~Ris~~~~~~~l~~~l~ 406 (419)
++. ++. +..|.+|+|+|++++.. + +..+++++||.+.||..|+. .+++||+++.++++++++++
T Consensus 295 ~~~-g~~-~~~~~~~~~~~~~~~~~------~----~~~~l~~~gi~v~~g~~~~~~~~~~~~iRi~~~~~~~~i~~~~~ 362 (381)
T 1v2d_A 295 RAM-GLR-VYVPEGTYFLMAELPGW------D----AFRLVEEARVALIPASAFYLEDPPKDLFRFAFCKTEEELHLALE 362 (381)
T ss_dssp HHT-TCC-EECCSBSSEEEEECTTC------C----HHHHHHHTCEECEEGGGGCSSSCCTTEEEEECCSCHHHHHHHHH
T ss_pred HHC-CCE-ecCCCcceEEEEecChH------h----HHHHHHhCCEEEecchHhCCCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 986 777 44777889999988641 2 55667889999999998864 67999999879999999999
Q ss_pred HHHHHHHHHhc
Q 014769 407 RMKAFCQRHTK 417 (419)
Q Consensus 407 ~l~~~~~~~~~ 417 (419)
+|++++++.++
T Consensus 363 ~l~~~l~~~r~ 373 (381)
T 1v2d_A 363 RLGRVVNSPRE 373 (381)
T ss_dssp HHHHHC-----
T ss_pred HHHHHHhhccc
Confidence 99999877643
No 45
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=100.00 E-value=8.2e-46 Score=354.84 Aligned_cols=377 Identities=16% Similarity=0.197 Sum_probs=295.1
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (419)
+++.....++.++.++....+...+..+.++|+|+.|+|. ..+.+++++.+.+++.+.... ....|++..|..++|++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~-~~~~Y~~~~g~~~lr~~ 87 (413)
T 3t18_A 9 KRATWNNGPDLAFDINNKANAAIEKYGREAVINAALGTLLDDKGKIIALPSVYDRLDEMDRS-HIASYAPIEGEKDYRKI 87 (413)
T ss_dssp TTTCCCCCCCHHHHHHHHHHHHHHHHCGGGCEECCSCCCBCTTSCBCCCHHHHHHHHHSCHH-HHHSCCCTTCCHHHHHH
T ss_pred hhcccCCCCChHHHHHHHHhhhhhhccccceEeccccCccCCCCCcCChHHHHHHHHhcCcc-cccCcCCCCCCHHHHHH
Confidence 4555667788899988765554434457789999999872 223467788888887663321 23479888899999999
Q ss_pred HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
+++++.+..+.. ++++|++|+|+++++..++.+++++||+|+++.|+|..+...++..|.+++.+++.+++ +.+|++.
T Consensus 88 la~~~~~~~~~~-~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~ 165 (413)
T 3t18_A 88 VIDTLFGPYKPE-GYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYRKICEEFGRNFKTFEFFTDD-FAFNIDV 165 (413)
T ss_dssp HHHHHHGGGCCS-SEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHHHHHHHHTCEEEEECCBCTT-SSBCHHH
T ss_pred HHHHHhcccCcc-ccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHHHHHHHhCCeEEEeeccCCC-CCcCHHH
Confidence 999997654422 44599999999999999999999999999999999999999999999999999875443 7899999
Q ss_pred HHHhhcC----Ccc-EEEEeCC-CCccccCCCHHHHHHHHHHHH------hCCCeEEEcccccccccCCCCCCCccc-cC
Q 014769 173 VEALADK----NTA-AMVIINP-GNPCGNVFTYHHLQEIAEMAR------KLRVMVVADEVYGHLTFGSIPYTPMGL-FG 239 (419)
Q Consensus 173 l~~~~~~----~~~-~v~i~~p-~nptG~~~~~~~l~~i~~~~~------~~~~~li~De~~~~~~~~~~~~~~~~~-~~ 239 (419)
|++++++ +++ ++++++| +||||.+++.+++++|+++|+ ++|+++|+||+|.++.+++....++.. ..
T Consensus 166 l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 245 (413)
T 3t18_A 166 YKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVAYLEFAGDGDQQRKFFEKFS 245 (413)
T ss_dssp HHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECTTGGGSSSSSTTTGGGGGGT
T ss_pred HHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecccccccCChhhHHHHHHHHh
Confidence 9998875 566 6788899 999999999999999999999 899999999999999887754434322 22
Q ss_pred C-CCc--EEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-----cccCCchHHHHHHHHHHcccc---
Q 014769 240 S-IVP--VITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILEKTK--- 308 (419)
Q Consensus 240 ~-~~~--~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~~~~--- 308 (419)
. .++ +++++||||.++++|+|+||+++.... +++++.+..... .+..++.++|.++..+++...
T Consensus 246 ~~~~~~~~i~~~S~sK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 320 (413)
T 3t18_A 246 NLPRNLFVVVAFSMSKSHTAYGLRSGAAVGISSS-----KEIIEEFEASLAHSARCNWSNGTHAAQNILIELERAENKKI 320 (413)
T ss_dssp TCCTTEEEEEEEEHHHHTTCGGGCCEEEEEEESC-----HHHHHHHHHHHHHHHHHHTSSCCHHHHHHHHHTTSHHHHHH
T ss_pred hcCCCeeEEEEEecCccCCCcCcCcEEEEEecCC-----HHHHHHHHHHHHHhhhccccCCChHHHHHHHHHhcChHHHH
Confidence 1 223 588999999999999999999983100 157777765432 124578888988888887532
Q ss_pred -hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769 309 -EDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK 387 (419)
Q Consensus 309 -~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~ 387 (419)
.+..++.+++++++++.+.+.|+++ ++. +..|++++|+|+++. +..++...| .++||.+.|| +
T Consensus 321 ~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gv~v~~g-----~ 384 (413)
T 3t18_A 321 YEQELVDLRNMLKSRADVFVTAAKEN-KLT-MIPYFGGFFTFIPTD--------KAFDIVKDL-EKENIFTIPS-----A 384 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHT-TCC-CBCCCSSSCEEEECS--------CHHHHHHHH-HHTTEECEEC-----S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHc-CCC-ccCCCceEEEEeCCC--------CHHHHHHHH-HhCCEEEecC-----C
Confidence 2345567788999999999999988 787 458899999998763 467777655 7789999997 5
Q ss_pred CeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 388 NWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 388 ~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+++||+++ .+++++ +++|.++++++.+
T Consensus 385 ~~iRis~~~~~~~~~---l~~l~~~l~~~~~ 412 (413)
T 3t18_A 385 KGIRVAICGVGEEKI---PKLVQRLAFYTNK 412 (413)
T ss_dssp SEEEECTTTSCGGGH---HHHHHHHHHHHHC
T ss_pred CceEEEEeeCCHHHH---HHHHHHHHHHHhc
Confidence 78999996 466666 8999999888754
No 46
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=100.00 E-value=6.5e-45 Score=350.90 Aligned_cols=361 Identities=19% Similarity=0.339 Sum_probs=291.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC-----------CCCCCCCCCCHHHHHHHHHHHHhhCC--CCCCC
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK-----------FNCYATNSGIPPARRAIADYLSRDLP--YKLSA 107 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~-----------~~~Y~~~~g~~~lr~~ia~~l~~~~~--~~~~~ 107 (419)
...+|+|+.+.. ...++.+.+++.+...... ...|++..|..++|+++++++.+.++ ..+++
T Consensus 37 p~~~i~lg~~~~-----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~ 111 (435)
T 3piu_A 37 TNGIIQMGLAEN-----QLCFDLLESWLAKNPEAAAFKKNGESIFAELALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDP 111 (435)
T ss_dssp TTSBEECSSCCC-----CSSHHHHHHHHHHCTTGGGTEETTEECHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCG
T ss_pred CCCeEEeccccc-----cccHHHHHHHHHhCccccccccccccccccccccCCCCCcHHHHHHHHHHHHHhhCCCCCCCH
Confidence 345788888642 2347778787776543211 14699999999999999999986544 45778
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNWEVDLDAVEALADK------N 180 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 180 (419)
++|++|+|+++++..++.+++++||.|+++.|+|.++...+. ..|.+++.++++++.++.+|++.|++++++ +
T Consensus 112 ~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~ 191 (435)
T 3piu_A 112 NHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFDRDLKWRTGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLR 191 (435)
T ss_dssp GGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHHHTTTTTCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCC
T ss_pred HHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHHHHHHHhcCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCC
Confidence 999999999999999999999999999999999999888777 789999999987766788999999998875 6
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC----------CCcEEEEecC
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS----------IVPVITLGSI 250 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~----------~~~~i~~~s~ 250 (419)
+++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.|++..+.++..+.. .++++++.|+
T Consensus 192 ~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~ 271 (435)
T 3piu_A 192 VKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSGTAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSL 271 (435)
T ss_dssp EEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSSCCCCHHHHHHC-------CGGGGEEEEEES
T ss_pred eEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCcCHHHhccccccccccCCCCCEEEEEee
Confidence 788999999999999999999999999999999999999999998887765555433322 4578999999
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~ 328 (419)
||.++++|+|+||++++++ ++.+.++.... .+..+++.+.++..++.... .+++++.+++++++++.+.+
T Consensus 272 sK~~g~~G~r~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~ 343 (435)
T 3piu_A 272 SKDLGLPGFRVGAIYSNDD-------MVVAAATKMSS-FGLVSSQTQHLLSAMLSDKKLTKNYIAENHKRLKQRQKKLVS 343 (435)
T ss_dssp SSSSCCGGGCEEEEEESCH-------HHHHHHHHHGG-GSCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccCCCceeEEEEEeCCH-------HHHHHHHHHhh-cCCCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999899999999998652 46666665444 35668888888888887632 34667888999999999999
Q ss_pred HhhcCCCCCCCCCCCceEEEEeecCcccccC-CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeec-CHHHHHHH
Q 014769 329 GVKEIPCISCPNKPEGSMVTMVKLNPWLLED-INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCA-EPSALKDG 404 (419)
Q Consensus 329 ~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~-~~~~l~~~ 404 (419)
.|+++ ++. +..+.+|+|+|+.++...... ..+..+++.++++++||.+.||..|+. ++++||+++. ++++++++
T Consensus 344 ~L~~~-g~~-~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~~~~~iRi~~~~~~~e~i~~~ 421 (435)
T 3piu_A 344 GLQKS-GIS-CLNGNAGLFCWVDMRHLLRSNTFEAEMELWKKIVYEVHLNISPGSSCHCTEPGWFRVCFANLPERTLDLA 421 (435)
T ss_dssp HHHTT-TCE-ECCCCSSSEEEEECGGGSSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSTTEEEEECSSSCHHHHHHH
T ss_pred HHHhc-CCc-ccCCCeeEEEEEEcccccccCCchhHHHHHHHHHHHCCEEEeCCcccCCCCCCEEEEEeeCCCHHHHHHH
Confidence 99987 777 447888899999987521000 002457778887777999999998864 6899999975 89999999
Q ss_pred HHHHHHHHHHHh
Q 014769 405 LGRMKAFCQRHT 416 (419)
Q Consensus 405 l~~l~~~~~~~~ 416 (419)
+++|+++++++.
T Consensus 422 l~~l~~~l~~~~ 433 (435)
T 3piu_A 422 MQRLKAFVGEYY 433 (435)
T ss_dssp HHHHHHHHHHHC
T ss_pred HHHHHHHHHHHh
Confidence 999999998764
No 47
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=100.00 E-value=3.1e-45 Score=349.28 Aligned_cols=381 Identities=17% Similarity=0.208 Sum_probs=282.5
Q ss_pred chhhhhCCc-hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC----CCCCCCCCCCCHH
Q 014769 14 KQEHKAAPA-VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG----KFNCYATNSGIPP 88 (419)
Q Consensus 14 ~~~~~~~~~-~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~----~~~~Y~~~~g~~~ 88 (419)
.++..+... .....+...+.....+..++++|+|+.|++. +++++.+.+++.+++... ....|++..|..+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~ 79 (400)
T 3asa_A 4 NPHFVSLTKNYLFADLQKRVAQFRLENPQHTVINLSIGDTT----QPLNASVAEAFASSIARLSSPTTCRGYGPDFGLPA 79 (400)
T ss_dssp CHHHHTCCCCCHHHHHHHHHHHHHHHCTTSCCEECSSCCCC----CCCCHHHHHHHHHHHHHHTSSSCCCCCCCTTCCHH
T ss_pred chhhhccCCcccHHHHHHHHHHhhhhcCCCceEeccCCCCC----CCCCHHHHHHHHHHHhcccccccccCCCCCCCCHH
Confidence 344444433 2344454444433334457889999999853 456788999988877531 2357988789999
Q ss_pred HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCCCCcc
Q 014769 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPERNWE 167 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~~ 167 (419)
+|+++++++. +|. +++++|++|+|+++++..++.. ..+||+|++++|+|+++...+...|.+ +..+++++++++.
T Consensus 80 lr~~la~~l~--~g~-~~~~~v~~~~G~~~al~~~~~~-~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 155 (400)
T 3asa_A 80 LRQKLSEDFY--RGF-VDAKEIFISDGAKVDLFRLLSF-FGPNQTVAIQDPSYPAYLDIARLTGAKEIIALPCLQENAFF 155 (400)
T ss_dssp HHHHHHHTTS--TTS-SCGGGEEEESCHHHHHHHHHHH-HCSSCEEEEEESCCHHHHHHHHHTTCSEEEEEECCGGGTTC
T ss_pred HHHHHHHHHH--cCC-CCHHHEEEccChHHHHHHHHHH-cCCCCEEEECCCCcHHHHHHHHHcCCcceEecccchhcCcc
Confidence 9999999974 343 6789999999999999997654 478999999999999999889999998 8888876544444
Q ss_pred cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEE
Q 014769 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVIT 246 (419)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~ 246 (419)
.+++. . +++++|++++|+||||.++|.+++++|+++|+++|+++|+||+|+++.+++....++..++. .+++++
T Consensus 156 ~~l~~----~-~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~ 230 (400)
T 3asa_A 156 PEFPE----D-THIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFEIPDARFCAIE 230 (400)
T ss_dssp CCCCT----T-CCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGGSTTGGGTEEE
T ss_pred cChhh----c-cCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhhCCCCCCceEE
Confidence 45432 1 46889999999999999999999999999999999999999999988776543344544442 346899
Q ss_pred EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh-hh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-CL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAE 324 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 324 (419)
++|+||.++++|+|+||++++++-....... ++.+.. .. ...++++.+.|.++..+++.. ++++.+++++++++
T Consensus 231 ~~s~sK~~g~~GlriG~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~---~~~~~~~~~~~~~~ 306 (400)
T 3asa_A 231 INSFSKPLGFAGIRLGWTVIPQELTYADGHF-VIQDWERFLSTTFNGASIPAQEAGVAGLSIL---PQLEAIHYYRENSD 306 (400)
T ss_dssp EEECCGGGTTTTCCCEEEECCTTCBCTTSCB-HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHT---TTCHHHHHHHHHHH
T ss_pred EecchhhcCCcchheeEEeeChhhccchhhh-HHHHHHHHhccCccCCChHHHHHHHHHhCcH---HHHHHHHHHHHHHH
Confidence 9999999989999999999865210000000 233321 11 223468889999998888763 56778888999999
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEee-cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHH
Q 014769 325 ICYDGVKEIPCISCPNKPEGSMVTMVK-LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSAL 401 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~-~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l 401 (419)
.+.+.|+++ ++. +..|.+|+|+|++ ++.. .+..++..++++++||.+.||..|+. ++++||++..+++++
T Consensus 307 ~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~gv~v~~g~~f~~~~~~~iRis~~~~~e~i 379 (400)
T 3asa_A 307 LLRKALLAT-GFE-VFGGEHAPYLWVKPTQAN-----ISDRDLFDFFLREYHIAITPGIGFGRSGSGFVRFSSLGKREDI 379 (400)
T ss_dssp HHHHHHHHT-TCE-EEECSSSSEEEEECCCTT-----CCTTTHHHHHHHHHSEECEEGGGGCGGGTTCEEEECCSCHHHH
T ss_pred HHHHHHHHC-CCe-eeCCCCceEEEEeccCCC-----CCHHHHHHHHHHhCCEEEeChhHhCCCCCCEEEEEeeCCHHHH
Confidence 999999887 776 4466788999999 7632 13456777887778999999998863 679999987789999
Q ss_pred HHHHHHHHHHHHHHhcc
Q 014769 402 KDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 402 ~~~l~~l~~~~~~~~~~ 418 (419)
++++++|+++++++...
T Consensus 380 ~~~l~~l~~~~~~~~~~ 396 (400)
T 3asa_A 380 LAACERLQMAPALQSHH 396 (400)
T ss_dssp HHHHHHHHC--------
T ss_pred HHHHHHHHHHHHhhhhc
Confidence 99999999999876543
No 48
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=100.00 E-value=2e-44 Score=339.34 Aligned_cols=333 Identities=18% Similarity=0.240 Sum_probs=282.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+.+++|+|+.|.+ .+++++.+++++.+.+.. ...|++ .+..++|+++++++ ++++++|++|+|++++
T Consensus 30 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~v~~~~g~t~a 96 (363)
T 3ffh_A 30 GLTKITKLSSNEN----PLGTSKKVAAIQANSSVE--TEIYPD-GWASSLRKEVADFY------QLEEEELIFTAGVDEL 96 (363)
T ss_dssp TCSCCEECSSCSC----TTCCCHHHHHHHHTCBSC--CCBC-----CHHHHHHHHHHH------TCCGGGEEEESSHHHH
T ss_pred CCCceEEccCCCC----CCCCCHHHHHHHHHHHHH--hhcCCC-cchHHHHHHHHHHh------CCChhhEEEeCCHHHH
Confidence 3578999999975 356789999999886643 446754 68999999999999 5778999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
++.+++++.++||+|+++.|+|..+...++..|.+++.+++++ ++.+|++.++++++++++++++++|+||||.++|.
T Consensus 97 ~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~ 174 (363)
T 3ffh_A 97 IELLTRVLLDTTTNTVMATPTFVQYRQNALIEGAEVREIPLLQ--DGEHDLEGMLNAIDEKTTIVWICNPNNPTGNYIEL 174 (363)
T ss_dssp HHHHHHHHCSTTCEEEEEESSCHHHHHHHHHHTCEEEEEECCT--TSCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHccCCCEEEEcCCChHHHHHHHHHcCCEEEEecCCC--CCCcCHHHHHHhcccCCCEEEEeCCCCCcCCCcCH
Confidence 9999999999999999999999999999999999999999864 56899999999998889999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++.+|++.|++ |+++|+|++|+++.+ +............++++++.|+||.++++|+|+||++++. +++
T Consensus 175 ~~l~~l~~~~~~-~~~li~De~~~~~~~-~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~ 244 (363)
T 3ffh_A 175 ADIQAFLDRVPS-DVLVVLDEAYIEYVT-PQPEKHEKLVRTYKNLIITRTFSKIYGLASARVGYGIADK--------EII 244 (363)
T ss_dssp HHHHHHHTTSCT-TSEEEEECTTGGGCS-SCCCCCGGGGGTCTTEEEEEESSSTTCCSSCCCEEEEECH--------HHH
T ss_pred HHHHHHHHhCCC-CcEEEEeCchHhhcC-ccccCHHHHhhcCCCEEEEeechhhhcCchhceeeeecCH--------HHH
Confidence 998888888887 999999999998877 4433344444456689999999999989999999999954 678
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... +++++.+.+.++..+++. .+++++.+++++++++.+.+.|++++++. + .|..|.|+|++++.
T Consensus 245 ~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~~----- 314 (363)
T 3ffh_A 245 RQLNIVRP-PFNTTSIGQKLAIEAIKD--QAFIGECRTSNANGIKQYEAFAKRFEKVK-L-YPANGNFVLIDLGI----- 314 (363)
T ss_dssp HHHHHTCC-SCCCBHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHCTTCE-E-CCCCSSEEEEECSS-----
T ss_pred HHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHhhCCCce-E-CCCCCeEEEEECCC-----
Confidence 88877655 567899999999999985 47888999999999999999999866887 4 35556788998863
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+..++...|. ++||.+.||..|+.++++|++++ ++++++++++.|+++
T Consensus 315 --~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 315 --EAGTIFSYLE-KNGYITRSGAALGFPTAVRITIG-KEEDNSAVIALLEKL 362 (363)
T ss_dssp --CHHHHHHHHH-HTTEECEETTTTTCTTEEEEECC-CHHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHH-HCCeEEEeCccCCCCCeEEEECC-CHHHHHHHHHHHHHh
Confidence 4677777774 57999999999988999999998 789999999999875
No 49
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=100.00 E-value=7.4e-46 Score=357.01 Aligned_cols=349 Identities=18% Similarity=0.231 Sum_probs=286.0
Q ss_pred CCCeeeccCCCC-CCCCCCCChHHH--HHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc---EEEcc
Q 014769 41 PRPVVPLGYGDP-TAFPCFRTAVEA--EDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD---VYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~-~~~~~~~~~~~v--~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~---i~~t~ 114 (419)
.+++|||+.|+| . ++.++.+ .+++.+.+.......|+++.|..++|+++++++.+.. .++++++ |++|+
T Consensus 46 ~~~~i~l~~g~~~~----~~~~~~~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~-~~~~~~~~~~i~~t~ 120 (430)
T 2x5f_A 46 KSTTYNATIGMATN----KDGKMFASSLDAMFNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDN-PELSIDNMSRPIVTN 120 (430)
T ss_dssp TTCSEECCCSSCEE----TTEECCCHHHHTTBSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHC-TTCCGGGBCCCEEES
T ss_pred CCCcEEeeeeeccC----CCCchhhHHHHHHHHhcCcccccccCCCCCCHHHHHHHHHHHhccC-cccCCCccceEEEcC
Confidence 457899999987 4 2334444 5555555433134589988899999999999998764 6778889 99999
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh-cCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCC
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR-KQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPG 190 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~ 190 (419)
|++++++.++++++++||+|++++|+|+++...+.. .|.+++.+++++++ +.+|++.+++++++ +++++++++|+
T Consensus 121 g~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~-~~~d~~~l~~~l~~~~~~~~~v~i~~p~ 199 (430)
T 2x5f_A 121 ALTHGLSLVGDLFVNQDDTILLPEHNWGNYKLVFNTRNGANLQTYPIFDKD-GHYTTDSLVEALQSYNKDKVIMILNYPN 199 (430)
T ss_dssp HHHHHHHHHHHHHCCTTCEEEEESSCCTHHHHHHTTTTCCEEEEECCBCTT-SCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred CchHHHHHHHHHHhCCCCEEEEcCCcCccHHHHHHHhcCCeEEEEeccCcc-CCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence 999999999999999999999999999999999998 99999999886543 67999999998876 77889999999
Q ss_pred CccccCCCHHHHHHHHHHHHh-----CCCeEEEcccccccccCCCCCCCcc-ccCC-CCc---EEEEecCCCcCCCCCce
Q 014769 191 NPCGNVFTYHHLQEIAEMARK-----LRVMVVADEVYGHLTFGSIPYTPMG-LFGS-IVP---VITLGSISKRWLVPGWR 260 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~-----~~~~li~De~~~~~~~~~~~~~~~~-~~~~-~~~---~i~~~s~sK~~~~~G~r 260 (419)
||||.++|.+++++|+++|++ +|+++|+||+|+.+.+++....++. .+.. .++ +++++|+||.++++|+|
T Consensus 200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 279 (430)
T 2x5f_A 200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEFFAWGFR 279 (430)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHTTCGGGC
T ss_pred CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCCCCCCCC
Confidence 999999999999999999999 9999999999999988765444443 3322 456 89999999999889999
Q ss_pred eEEEEe---eCCCCccchhhHHHHHHhhhc-----cccCCchHHHHHHHHHHc-ccc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769 261 FGWLVT---NDPNGIFQKSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILE-KTK-EDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 261 ~G~~~~---~~~~~~~~~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~-~~~-~~~~~~~~~~~~~~~~~l~~~l 330 (419)
+||+++ ++ ++++.+..... .+++++.+.|.++.++|+ ... .+.+++.+++++++++.+.+.|
T Consensus 280 iG~~~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 351 (430)
T 2x5f_A 280 VGFMTFGTSDQ--------TTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVV 351 (430)
T ss_dssp CEEEEEBCCCH--------HHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEecCCH--------HHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 43 57777765432 356789999999999998 631 2233448899999999999999
Q ss_pred h----cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cCHHHHHHHH
Q 014769 331 K----EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AEPSALKDGL 405 (419)
Q Consensus 331 ~----~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~~~~l~~~l 405 (419)
+ ++ ++. +..|.+|+|+|++++. .+..++...|++++||.+.|| ..+++||+++ .+++++++++
T Consensus 352 ~~~~~~~-g~~-~~~~~~g~~~~~~~~~------~~~~~~~~~l~~~~gi~v~~g----~~~~iRis~~~~~~e~i~~~~ 419 (430)
T 2x5f_A 352 YADQYHS-HWQ-AYDFNSGYFMAIKVHD------VDPEALRKHLIDKYSIGVIAL----NATDIRIAFSCVEKDDIPHVF 419 (430)
T ss_dssp TCGGGTT-TEE-ECCCCBSSEEEEEESS------SCHHHHHHHHHHHHCEECEEC----SSSEEEEEGGGSCGGGHHHHH
T ss_pred HhhCCCC-Cce-eeCCCceEEEEeCCCC------CCHHHHHHHHHHhCCEEEecC----CCCeEEEEEecCCHHHHHHHH
Confidence 8 44 666 4478889999999871 256788888866589999998 3679999997 8889999999
Q ss_pred HHHHHHHHHH
Q 014769 406 GRMKAFCQRH 415 (419)
Q Consensus 406 ~~l~~~~~~~ 415 (419)
++|+++++++
T Consensus 420 ~~l~~~l~~~ 429 (430)
T 2x5f_A 420 DSIAKAIDDL 429 (430)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999999865
No 50
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=100.00 E-value=2e-44 Score=346.76 Aligned_cols=358 Identities=20% Similarity=0.357 Sum_probs=285.5
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC----------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCC--CCCCc
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS----------GKFNCYATNSGIPPARRAIADYLSRDLPYK--LSADD 109 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~----------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~--~~~~~ 109 (419)
..+|+|+.+... ++ ++.+.+++.+.... .....|+++.|..++|+++++++.+.+|.. +++++
T Consensus 36 ~~~i~l~~~~~~----~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~ 110 (428)
T 1iay_A 36 NGVIQMGLAENQ----LC-LDLIEDWIKRNPKGSICSEGIKSFKAIANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPER 110 (428)
T ss_dssp TSBEECSSCCCC----SS-HHHHHHHHHHCTTSSTTC----CHHHHHHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTS
T ss_pred Cceeeeccccch----hh-HHHHHHHHHhccccccccccccccHhhcCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhh
Confidence 468999977531 23 45777777743210 013579988899999999999998877755 77899
Q ss_pred EEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH-hhcCCEEEEEeccCCCCcccChHHHHHhhcC------Ccc
Q 014769 110 VYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-QRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTA 182 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~ 182 (419)
|++|+|+++++..++++++++||+|+++.|+|.++...+ ...|.+++.++++.++++.+|++.+++++++ +++
T Consensus 111 i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~ 190 (428)
T 1iay_A 111 VVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNRDLRWRTGVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVK 190 (428)
T ss_dssp CEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHHHTTTTTCCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHHHHHHhcCCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceE
Confidence 999999999999999999999999999999999987644 4679999999886555678899999988753 578
Q ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--------CCcEEEEecCCCcC
Q 014769 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--------IVPVITLGSISKRW 254 (419)
Q Consensus 183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--------~~~~i~~~s~sK~~ 254 (419)
+|++++|+||||.++|.+++++|+++|+++|+++|+||+|..+.+++..+.++..+.. .++++++.|+||.+
T Consensus 191 ~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~ 270 (428)
T 1iay_A 191 GLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAATVFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM 270 (428)
T ss_dssp EEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGGCCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS
T ss_pred EEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEeccccccccCCCCccCHHHhccccccccCCCCcEEEEecchhhc
Confidence 8999999999999999999999999999999999999999998876654444433322 35789999999999
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
+++|+|+||++++++ ++++.++.... .++.+.++|.++..+++... .+++++.+++++++++.+.+.|++
T Consensus 271 g~~Glr~G~~~~~~~-------~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 342 (428)
T 1iay_A 271 GLPGFRVGIIYSFND-------DVVNCARKMSS-FGLVSTQTQYFLAAMLSDEKFVDNFLRESAMRLGKRHKHFTNGLEV 342 (428)
T ss_dssp SCGGGCEEEEEESCH-------HHHHHHHHHHT-TSCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCceEEEEEeCCH-------HHHHHHHHHHh-cccCCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 899999999998542 57777765543 35678899999999887632 246788889999999999999998
Q ss_pred CCCCCCCCCCCceEEEEeecCcccccC-CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-cCHHHHHHHHHHH
Q 014769 333 IPCISCPNKPEGSMVTMVKLNPWLLED-INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-AEPSALKDGLGRM 408 (419)
Q Consensus 333 ~~~~~~~~~p~~g~~~~~~~~~~~~~~-~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-~~~~~l~~~l~~l 408 (419)
+ ++. +..+.+|+|+|++++...... ..+..++...|++++||.+.||..|+. ++++||+++ .+++++++++++|
T Consensus 343 ~-g~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~~~~~~~~~~~~iRis~~~~~~e~i~~~~~~l 420 (428)
T 1iay_A 343 V-GIK-CLKNNAGLFCWMDLRPLLRESTFDSEMSLWRVIINDVKLNVSPGSSFECQEPGWFRVCFANMDDGTVDIALARI 420 (428)
T ss_dssp T-TCC-BCCCSSSSEEEEECGGGCSSSSHHHHHHHHHHHHHTSCEECEEGGGGTCSSSSEEEEECSSSCHHHHHHHHHHH
T ss_pred c-CCc-ccCCCeeEEEEEechhhcCCCchhHHHHHHHHHHHhCCEEEeCchhhCCCCCCEEEEEEecCCHHHHHHHHHHH
Confidence 8 777 446668999999986421000 002346777776667999999988865 579999997 7899999999999
Q ss_pred HHHHHH
Q 014769 409 KAFCQR 414 (419)
Q Consensus 409 ~~~~~~ 414 (419)
++++++
T Consensus 421 ~~~l~~ 426 (428)
T 1iay_A 421 RRFVGV 426 (428)
T ss_dssp HHHHHT
T ss_pred HHHHhc
Confidence 999865
No 51
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=100.00 E-value=2.8e-45 Score=349.82 Aligned_cols=375 Identities=15% Similarity=0.108 Sum_probs=288.5
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRA 92 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 92 (419)
.+.+...+++.+..++..... ...+++|+|+.|.| ...+..+..+.+.+++.+.+.......|++..|.+++|++
T Consensus 4 ~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ 79 (401)
T 7aat_A 4 WSHVEMGPPDPILGVTEAFKR----DTNSKKMNLGVGAYRDDNGKPYVLNCVRKAEAMIAAKKMDKEYLPIAGLADFTRA 79 (401)
T ss_dssp STTCCCCCCCHHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHH
T ss_pred hhcCCCCCCChhHHHHHHHhh----CCCCCceeeeeeeEECCCCCEechHHHHHHHHHhcccccccCCCCCCCCHHHHHH
Confidence 344556667778777765543 34567999999987 4333334567888988887764345589998999999999
Q ss_pred HHHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhc---CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769 93 IADYLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLA---RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (419)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~---~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (419)
+++++.+.+|..+++++|++ |+|++++++.++.++. ++||+|++++|+|..+...++..|.+++.++++...++.
T Consensus 80 ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 159 (401)
T 7aat_A 80 SAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHTPIFRDAGLQLQAYRYYDPKTCS 159 (401)
T ss_dssp HHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHHHHHHHTTCEEEEEECEETTTTE
T ss_pred HHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHHHHHHHcCCeeEeeeeeccccCc
Confidence 99999887777778999987 9999999999887765 899999999999999999999999999999986555678
Q ss_pred cChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCcccc-CCC
Q 014769 168 VDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLF-GSI 241 (419)
Q Consensus 168 ~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~ 241 (419)
+|++.+++.+. ++++++++++||||||.+++.+++++|+++|+++|+++|+||+|..+.+++. ...++..+ ...
T Consensus 160 ~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~ 239 (401)
T 7aat_A 160 LDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAYQGFASGDINRDAWALRHFIEQG 239 (401)
T ss_dssp ECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTT
T ss_pred cCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEccccccccCCCccccHHHHHHHHhcC
Confidence 99997776664 4678889999999999999999999999999999999999999999887653 12222221 334
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKL 315 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~ 315 (419)
+++++++|+||.|+++|+|+||++++....... ..+...++... ..+.+++...|.++..++.... .+++++.
T Consensus 240 ~~~i~~~S~sK~~~~~G~RiG~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 318 (401)
T 7aat_A 240 IDVVLSQSYAKNMGLYGERAGAFTVICRDAEEA-KRVESQLKILIRPMYSNPPMNGARIASLILNTPELRKEWLVEVKGM 318 (401)
T ss_dssp CCCEEEEECTTTSCCGGGCEEEEEEECSSHHHH-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred CcEEEEecCCcccccccCceEEEEEEeCCHHHH-HHHHHHHHHHHHhccCCCChHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 578999999999999999999998743211000 01344444432 2345566777877777776521 3457778
Q ss_pred HHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEE
Q 014769 316 IDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRI 392 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ri 392 (419)
+++++++++.+.+.|+++ +++. +..|++|+|+|+.++ .+++..+++++||.+.|+ +|+
T Consensus 319 ~~~~~~~r~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gi~v~~~--------~Ri 379 (401)
T 7aat_A 319 ADRIISMRTQLVSNLKKEGSSHNWQ-HITDQIGMFCFTGLK----------PEQVERLTKEFSIYMTKD--------GRI 379 (401)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHHHCEECCTT--------CEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCc-eecCCcceEEecCCC----------HHHHHHHHHhCCEeccCC--------CeE
Confidence 889999999999999876 2355 446889999997653 344577778899999875 599
Q ss_pred Eee-cCHHHHHHHHHHHHHHH
Q 014769 393 AFC-AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 393 s~~-~~~~~l~~~l~~l~~~~ 412 (419)
+++ .++++|+++++.|++++
T Consensus 380 s~~~~~~~~i~~~~~~l~~~~ 400 (401)
T 7aat_A 380 SVAGVASSNVGYLAHAIHQVT 400 (401)
T ss_dssp EGGGCCTTTHHHHHHHHHHHH
T ss_pred EeccCChhhHHHHHHHHHHHh
Confidence 995 56677999999999875
No 52
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=100.00 E-value=1.3e-44 Score=339.47 Aligned_cols=337 Identities=17% Similarity=0.258 Sum_probs=287.1
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
...++++|+|+.|.+ .+++++.+++++.+.+.. ...|+. .+..++|+++++++ ++++++|++|+|++
T Consensus 12 ~~~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~~ 78 (354)
T 3ly1_A 12 APSTDNPIRINFNEN----PLGMSPKAQAAARDAVVK--ANRYAK-NEILMLGNKLAAHH------QVEAPSILLTAGSS 78 (354)
T ss_dssp CCCSSSCEECSSCCC----SSCCCHHHHHHHHHTGGG--TTSCCH-HHHHHHHHHHHHHT------TSCGGGEEEESHHH
T ss_pred CCCCCceEEccCCCC----CCCCCHHHHHHHHHHHhh--CcCCCC-CchHHHHHHHHHHh------CCChHHEEEeCChH
Confidence 345889999999974 357889999999988864 457754 58899999999998 57789999999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeCCCCcccc
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGN 195 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~ 195 (419)
+++..++.+++++||+|+++.|+|.++...++..|.+++.+++++ ++.+|++.++++++ ++++++++++|+||||.
T Consensus 79 ~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~~~v~l~~p~nptG~ 156 (354)
T 3ly1_A 79 EGIRAAIEAYASLEAQLVIPELTYGDGEHFAKIAGMKVTKVKMLD--NWAFDIEGLKAAVAAYSGPSIVYLVNPNNPTGT 156 (354)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHHHTCSSCEEEEEESSCTTTCC
T ss_pred HHHHHHHHHHhCCCCeEEECCCCchHHHHHHHHcCCEEEEecCCC--CCCCCHHHHHHHhccCCCCCEEEEeCCCCCcCC
Confidence 999999999999999999999999999999999999999998753 47899999999998 78999999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC-CcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI-VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~-~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 274 (419)
++|.+++.+|+++| ++|+++|+|++|+.+.+++.....+...+.. +++++++|+||.++++|+|+||++++.
T Consensus 157 ~~~~~~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~------ 229 (354)
T 3ly1_A 157 ITPADVIEPWIASK-PANTMFIVDEAYAEFVNDPRFRSISPMITQGAENIILLKTFSKIHAMAGMRVGYAVAHP------ 229 (354)
T ss_dssp CCCHHHHHHHHHTC-CTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEEEEEESSSTTCCGGGCCEEEECCH------
T ss_pred CcCHHHHHHHHHhC-CCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEEEEeeChhhccChhhhheeeecCH------
Confidence 99999999999999 8999999999999988776544444333444 678999999999988999999999854
Q ss_pred hhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc
Q 014769 275 KSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP 354 (419)
Q Consensus 275 ~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~ 354 (419)
++++.++..... ++++.+.+.++..+++. .+++++.+++++++++.+.+.|+++ ++. + .+..|+|+|++++.
T Consensus 230 --~~~~~~~~~~~~-~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-~~~-~-~~~~~~~~~~~~~~ 301 (354)
T 3ly1_A 230 --TVIALMGRYVAG-EKINFSGVDAALASMND--SAFITYSKKSNDVSRQILLKALEDL-KLP-Y-LPSEGNFVFHQLVV 301 (354)
T ss_dssp --HHHHHHGGGTTC-SCCCHHHHHHHHHHTTC--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECSS
T ss_pred --HHHHHHHHhcCC-CCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCe-E-CCCCceEEEEECCC
Confidence 688888776553 68899999999999986 4788899999999999999999987 776 4 35567788998863
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+..++...| .++||.+. |..++.++++||+++ ++++++++++.|++++++
T Consensus 302 -------~~~~~~~~l-~~~gi~v~-g~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~~ 351 (354)
T 3ly1_A 302 -------PLKDYQTHM-ADAGVLIG-RAFPPADNWCRISLG-TPQEMQWVADTMREFRKK 351 (354)
T ss_dssp -------CHHHHHHHH-HHTTEECC-CCCTTCTTEEEEECC-CHHHHHHHHHHHHHHHHT
T ss_pred -------CHHHHHHHH-HHCCEEEe-ecCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHh
Confidence 466777776 46799998 776667899999998 688999999999998875
No 53
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=100.00 E-value=1.8e-44 Score=339.84 Aligned_cols=333 Identities=16% Similarity=0.189 Sum_probs=281.9
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.+++|+|+.|.+. +++++.+++++.+.+.. ...|+++.+ .++|+++++++ ++++++|++|+|+++++
T Consensus 29 ~~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~~~~-~~lr~~la~~~------~~~~~~v~~~~g~~~a~ 95 (365)
T 3get_A 29 VKEVIKLASNENP----FGTPPKAIECLRQNANK--AHLYPDDSM-IELKSTLAQKY------KVQNENIIIGAGSDQVI 95 (365)
T ss_dssp CSCCEECSSCCCT----TCSCHHHHHHHHHHGGG--TTSCCCTTC-HHHHHHHHHHH------TCCGGGEEEESSHHHHH
T ss_pred CCceEEecCCCCC----CCCCHHHHHHHHHHHHh--hccCCCCCh-HHHHHHHHHHh------CCCcceEEECCCHHHHH
Confidence 4789999999753 56889999999998863 457887666 99999999998 56789999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
+.++.+++++||+|+++.|+|..+...++..|.+++.+++ ...++ +|++++++++++++++|++++|+||||.++|.+
T Consensus 96 ~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~-~~~~~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~ 173 (365)
T 3get_A 96 EFAIHSKLNSKNAFLQAGVTFAMYEIYAKQCGAKCYKTQS-ITHNL-DEFKKLYETHKDEIKLIFLCLPNNPLGECLDAS 173 (365)
T ss_dssp HHHHHHHCCTTCEEEECSSCCTHHHHHHHHHTCEEEECSS-SSCCH-HHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHHhCCCCEEEEeCCChHHHHHHHHHcCCEEEEEec-CCCCC-CCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHH
Confidence 9999999999999999999999999999999999999887 34567 999999999988899999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEccccccccc--CCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
++.+|+++| ++|+++|+|++|+.+.+ .+....+ ....+..+++++++|+||.++++|+|+||++++. +
T Consensus 174 ~l~~l~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~ 244 (365)
T 3get_A 174 EATEFIKGV-NEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLYGLGGLRIGYGIANA--------N 244 (365)
T ss_dssp HHHHHHHTS-CTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTTSCTTTCCEEEEECH--------H
T ss_pred HHHHHHHhC-CCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHhcCcchheEEEEcCH--------H
Confidence 999999988 57999999999998875 4322222 2223344578999999999999999999999854 6
Q ss_pred HHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 278 ~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
+++.++.... .++++.+.+.++..+++. .+++++.+++++++++.+.+.|+++ ++. + .+..|.|+|++++..
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~-g~~-~-~~~~~~~~~~~~~~~-- 316 (365)
T 3get_A 245 IISAFYKLRA-PFNVSNLALKAAVAAMDD--DEFTEKTLENNFSQMELYKEFAKKH-NIK-I-IDSYTNFITYFFDEK-- 316 (365)
T ss_dssp HHHHHHHHSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECSSS--
T ss_pred HHHHHHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-E-CCCCCeEEEEECCCC--
Confidence 7788876654 356899999999999986 4788999999999999999999988 776 4 345566789988742
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
+..++...| .++||.+.||..|+ ++++|++++ ++++++++++.|++++
T Consensus 317 ----~~~~~~~~l-~~~gi~v~~g~~~~-~~~iRis~~-~~~~i~~l~~~l~~~l 364 (365)
T 3get_A 317 ----NSTDLSEKL-LKKGIIIRNLKSYG-LNAIRITIG-TSYENEKFFTEFDKIL 364 (365)
T ss_dssp ----CHHHHHHHH-HTTTEECEECGGGT-CSEEEEECC-CHHHHHHHHHHHHHHH
T ss_pred ----CHHHHHHHH-HHCCEEEEECccCC-CCEEEEEcC-CHHHHHHHHHHHHHHh
Confidence 467777777 55799999999998 899999998 7889999999998876
No 54
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=100.00 E-value=7.7e-45 Score=346.28 Aligned_cols=364 Identities=16% Similarity=0.133 Sum_probs=286.9
Q ss_pred hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCC---CCCCCCCCCChHHHHHHHHH-HHhCCCCCCCCCCCCCHHHHHHH
Q 014769 18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYG---DPTAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g---~~~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
...+.+.+..+...+. +...+++|||+.| +|. ...+.++.+++++.+ .+.......|++..|..++|+++
T Consensus 6 ~~~~~~~~~~~~~~~~----~~~~~~~i~l~~g~y~d~~--~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 79 (397)
T 3fsl_A 6 DAYAGDPILTLMERFK----EDPRSDKVNLSIGLYYNED--GIIPQLQAVAEAEARLNAQPHGASLYLPMEGLNCYRHAI 79 (397)
T ss_dssp CCCCCCHHHHHHHHHH----TCCCSCCEECSSCCCCCTT--SCCCCCHHHHHHHHHHHHSCCCCCCCCCTTCCHHHHHHH
T ss_pred CCCCCCchhhHHHHHh----cCCCCCeEEEeeeEEECCC--CCccCcHHHHHHHHhhccCccccccCCCCCchHHHHHHH
Confidence 3455667777766543 3446789999999 443 234566999999999 88765556899989999999999
Q ss_pred HHHHHhhCCCCCCCC--cEEEcccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccC
Q 014769 94 ADYLSRDLPYKLSAD--DVYVTLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVD 169 (419)
Q Consensus 94 a~~l~~~~~~~~~~~--~i~~t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 169 (419)
++++....+..++++ +|++|+|++++++.++ ..+.++||+|++++|+|.++...++..|.+++.+++.+++++.+|
T Consensus 80 a~~~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 159 (397)
T 3fsl_A 80 APLLFGADHPVLKQQRVATIQTLGGSGALKVGADFLKRYFPESGVWVSDPTWENHVAIFAGAGFEVSTYPWYDEATNGVR 159 (397)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCHHHHHHHHHTTCCEEEECCEETTTTEEC
T ss_pred HHHHhcCCcccccccceEEEEcCCcHHHHHHHHHHHHhcCCCCeEEEeCCCchhHHHHHHHcCCceEEEeeeeccCCcCc
Confidence 999976544444788 8999999999999995 455789999999999999999999999999999988555577899
Q ss_pred hHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCcccc-CCCCcE
Q 014769 170 LDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLF-GSIVPV 244 (419)
Q Consensus 170 ~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~-~~~~~~ 244 (419)
++.++++++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+ +..+++
T Consensus 160 ~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (397)
T 3fsl_A 160 FNDLLATLKTLQAGSIVLLHPCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPA 239 (397)
T ss_dssp HHHHHHHHTTCCTTCEEEECSSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCE
T ss_pred HHHHHHHHHhCCCCCEEEEeCCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCE
Confidence 999999987 4667888899999999999999999999999999999999999999888632 22233332 344678
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH----Hhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHH
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI----KDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCK 314 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l----~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~ 314 (419)
++++|+||.++++|+|+||++++... +++++.+ +... ..+.+++..+|.++..++.... .+++++
T Consensus 240 i~~~S~SK~~~~~G~riG~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 314 (397)
T 3fsl_A 240 LVSNSFSKIFSLYGERVGGLSVMCED-----AEAAGRVLGQLKATVRRNYSSPPNFGAQVVAAVLNDEALKASWLKEVEE 314 (397)
T ss_dssp EEEEECTTTTTCGGGCCEEEEEECSS-----HHHHHHHHHHHHHHHHTTTSSCCSHHHHHHHHHHTSHHHHHHHHHHHHH
T ss_pred EEEecccccccCcCCCeeEEEEecCC-----HHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 99999999999999999999864321 1333333 2221 2345567888888888887532 356788
Q ss_pred HHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769 315 LIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLR 391 (419)
Q Consensus 315 ~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R 391 (419)
.+++++++++.+.+.|++++ ++. +..|++|+|+|++++ . +.+.++++++||.+.||. |
T Consensus 315 ~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gi~v~~g~--------R 375 (397)
T 3fsl_A 315 MRTRILAMRQELVKVLSTEMPERNFD-YLLNQRGMFSYTGLS---------A-AQVDRLREEFGVYLIASG--------R 375 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHTTCEECCTTC--------E
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCce-eecCCceEEEecCCC---------H-HHHHHHHHhCCEEECCCC--------e
Confidence 89999999999999998864 566 447889999998764 2 345667788999999974 9
Q ss_pred EEeec-CHHHHHHHHHHHHHH
Q 014769 392 IAFCA-EPSALKDGLGRMKAF 411 (419)
Q Consensus 392 is~~~-~~~~l~~~l~~l~~~ 411 (419)
++++. ++++|++++++|+++
T Consensus 376 is~~~~~~~~i~~~~~~l~~~ 396 (397)
T 3fsl_A 376 MCVAGLNTANVQRVAKAFAAV 396 (397)
T ss_dssp EEGGGCCTTTHHHHHHHHHHH
T ss_pred EEEEecCHhhHHHHHHHHHhh
Confidence 99965 788899999999875
No 55
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=100.00 E-value=1.1e-43 Score=334.70 Aligned_cols=333 Identities=19% Similarity=0.286 Sum_probs=284.3
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCC-CCCcEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKL-SADDVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~~t~g~~~ 118 (419)
.++++|+|+.|.+ .+++++.+.+++.+.+.......|++ .+..++|+++++++ ++ ++++|++|+|+++
T Consensus 28 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~l~~~la~~~------g~~~~~~i~~~~g~t~ 96 (367)
T 3euc_A 28 DSHGLVKLDAMEN----PYRLPPALRSELAARLGEVALNRYPV-PSSEALRAKLKEVM------QVPAGMEVLLGNGSDE 96 (367)
T ss_dssp CCTTCEECCSSCC----CCCCCHHHHHHHHHHHHHHHTTCSCC-CCHHHHHHHHHHHH------TCCTTCEEEEEEHHHH
T ss_pred CCCCeeEccCCCC----CCCCCHHHHHHHHHHhhhhhhhcCCC-CcHHHHHHHHHHHh------CCCCcceEEEcCCHHH
Confidence 3578999999984 36778999999999886433457876 58899999999998 45 6789999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCC
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~ 197 (419)
+++.++++++++||+|+++.|+|.++...++..|.+++.+++++ ++.+|++.+++++++ ++++|++++|+||||.++
T Consensus 97 a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~ 174 (367)
T 3euc_A 97 IISMLALAAARPGAKVMAPVPGFVMYAMSAQFAGLEFVGVPLRA--DFTLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLF 174 (367)
T ss_dssp HHHHHHHHTCCTTCEEEEEESCSCCSCHHHHTTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHcCCCCEEEEcCCCHHHHHHHHHHcCCeEEEecCCC--CCCCCHHHHHHHhhccCCCEEEEcCCCCCCCCCC
Confidence 99999999999999999999999999999999999999998864 567999999999987 899999999999999999
Q ss_pred CHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 198 TYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
+.+++++|+++|+++ |+++|+|++|+.+...+ . ...++..++++++.|+||. +++|+|+||++++.
T Consensus 175 ~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~--~--~~~~~~~~~~i~~~s~sK~-~~~G~r~G~~~~~~------- 242 (367)
T 3euc_A 175 DAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQES--W--MSRLTDFGNLLVMRTVSKL-GLAGIRLGYVAGDP------- 242 (367)
T ss_dssp CHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCC--S--GGGGGTCTTEEEEEECCCT-TSCSCCEEEEEECH-------
T ss_pred CHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccc--h--HHHHhhCCCEEEEecchhh-cccccCceeeeeCH-------
Confidence 999999999999999 99999999999876332 2 1233445678999999999 99999999999864
Q ss_pred hhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcc
Q 014769 276 SGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPW 355 (419)
Q Consensus 276 ~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~ 355 (419)
++++.+..... .++++.+.+.++..+++. .+++++.+++++++++.+.+.|+++|++. + .|.+|+|+|++++
T Consensus 243 -~~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~g~~-~-~~~~~~~~~~~~~-- 314 (367)
T 3euc_A 243 -QWLEQLDKVRP-PYNVNVLTEATALFALEH--VAVLDEQAAQLRAERSRVAEGMAAHGGVT-V-FPSAANFLLARVP-- 314 (367)
T ss_dssp -HHHHHHGGGCC-SSCCCHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHHHHHHTSTTCE-E-CCCSSSEEEEECS--
T ss_pred -HHHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCcE-E-CCCCCeEEEEECC--
Confidence 67777776554 457899999999999986 67789999999999999999999988887 5 5667888998886
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
+..++...| .++||.+.+|..|+. .+++|++++ ++++++++++.|+++++
T Consensus 315 ------~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~iRis~~-~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 315 ------DAAQTFDRL-LARKVLIKNVSKMHPLLANCLRVTVS-TPEENAQFLEAFAASLQ 366 (367)
T ss_dssp ------CHHHHHHHH-HTTTEECEECGGGCGGGTTEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred ------CHHHHHHHH-HHCCeEEEECCccCCCCCCEEEEecC-CHHHHHHHHHHHHHHhc
Confidence 356676665 778999999988753 689999998 78999999999988763
No 56
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=100.00 E-value=1.5e-44 Score=346.87 Aligned_cols=348 Identities=19% Similarity=0.156 Sum_probs=274.5
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHH--hCC-CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAV--RSG-KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~--~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.+|+|+.|.|... .+++++.+.+++.+.+ ... ....|+++.|..++|++|++++ ++++++|++|+|++++
T Consensus 33 ~~i~l~~g~~~~~-~~~~~~~~~~a~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~------~~~~~~i~~t~G~~~a 105 (422)
T 3d6k_A 33 LSLDLTRGKPSAE-QLDLSNDLLSLPGGDFRTKDGVDCRNYGGLLGIADIRELWAEAL------GLPADLVVAQDGSSLN 105 (422)
T ss_dssp CCEECCCCSCCHH-HHHTTGGGGGCSTTCCBCTTCCBTTSSCCSSCCHHHHHHHHHHH------TCCGGGEEECSSCHHH
T ss_pred CeEeCCCCCCChh-hCCCcHHHHHHHHHHHhhccchhhhCCCCCCCCHHHHHHHHHHh------CCChhHEEEecchHHH
Confidence 4799999986310 1455666777766543 122 3458999999999999999999 5788999999999999
Q ss_pred H--HHHHHHhcCC------------CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEE
Q 014769 120 V--EVILSVLARP------------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAM 184 (419)
Q Consensus 120 l--~~~~~~l~~~------------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 184 (419)
+ ..++.++..+ +|+|++++|+|+++...++..|.+++.++++++ ++|++.+++++++ +++++
T Consensus 106 l~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~~v 182 (422)
T 3d6k_A 106 IMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHFTITEHFGFEMINVPMTDE---GPDMGVVRELVKDPQVKGM 182 (422)
T ss_dssp HHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHHHHHHHcCCEEEecCCCCC---CCCHHHHHHHHhcCCCeEE
Confidence 7 6777887665 347999999999999999999999999998643 4899999999875 67777
Q ss_pred E-EeCCCCccccCCCHHHHHHHHHHHH-hCCCeEEEcccccc--cccCCCCCCCccc----cCCCCcEEEEecCCCcCCC
Q 014769 185 V-IINPGNPCGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGH--LTFGSIPYTPMGL----FGSIVPVITLGSISKRWLV 256 (419)
Q Consensus 185 ~-i~~p~nptG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~--~~~~~~~~~~~~~----~~~~~~~i~~~s~sK~~~~ 256 (419)
+ +++|+||||.++|.+++++|+++|+ ++|+++|+||+|.. +.+++....++.. .+..+++++++||||. ++
T Consensus 183 ~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~ 261 (422)
T 3d6k_A 183 WTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNAYALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-TH 261 (422)
T ss_dssp EECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SC
T ss_pred EEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECCccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cC
Confidence 7 6899999999999999999999999 99999999999986 4333323334322 2345679999999998 89
Q ss_pred CCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc-cc-hHHHHHHHHHHHHHHHHHHHHhhc-
Q 014769 257 PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK-TK-EDFFCKLIDTLRESAEICYDGVKE- 332 (419)
Q Consensus 257 ~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~l~~- 332 (419)
+|+|+||++++. ++++.+..... .+++++.++|.++..+++. .. .+++++.++.++++++.+.+.|.+
T Consensus 262 ~GlriG~~~~~~--------~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 333 (422)
T 3d6k_A 262 AGSGVSFFASSK--------ENIEWYASHANVRGIGPNKLNQLAHAQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR 333 (422)
T ss_dssp TTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cccceEEEEeCH--------HHHHHHHHHHHhhcCCCCHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999864 67777776643 3567899999999999986 21 367778888888898888888765
Q ss_pred ---CCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-CCCCC-----CCCeEEEEee-cCHHHHH
Q 014769 333 ---IPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG-----LKNWLRIAFC-AEPSALK 402 (419)
Q Consensus 333 ---~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~~Ris~~-~~~~~l~ 402 (419)
++++. +..|++|+|+|++++.. +..++. .++.++||.+.| |..|. ..+++||+++ .++++++
T Consensus 334 l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~-~~l~~~gV~v~~~g~~f~~~~~~~~~~iRis~~~~~~e~i~ 405 (422)
T 3d6k_A 334 LSEYGVAK-WTSPTGGYFISVDVVPG------TASRVV-ELAKEAGIALTGAGSSFPLHNDPNNENIRLAPSLPPVAELE 405 (422)
T ss_dssp HGGGTCEE-ECCCSBSSCEEEEESTT------CHHHHH-HHHHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHHHHH
T ss_pred cCcCCceE-EeCCCcceEEEEECCCC------CHHHHH-HHHHHCCeEEEcCccccCCCCCCCCCeEEEecCCCCHHHHH
Confidence 32344 34788999999998741 344454 556888999999 55563 2589999998 6999999
Q ss_pred HHHHHHHHHHHHHhc
Q 014769 403 DGLGRMKAFCQRHTK 417 (419)
Q Consensus 403 ~~l~~l~~~~~~~~~ 417 (419)
+++++|+++++++.+
T Consensus 406 ~~~~~l~~~l~~~~~ 420 (422)
T 3d6k_A 406 VAMDGFATCVLMAAL 420 (422)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999988754
No 57
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=100.00 E-value=2.3e-44 Score=345.30 Aligned_cols=374 Identities=20% Similarity=0.264 Sum_probs=278.1
Q ss_pred CchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC----CCCCCCCCCCHHHHHHHHHH
Q 014769 21 PAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK----FNCYATNSGIPPARRAIADY 96 (419)
Q Consensus 21 ~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~----~~~Y~~~~g~~~lr~~ia~~ 96 (419)
.++.+...+.++.+. ..++++|+|+.|.|... .++.+.+.+++.+.+.+.. ...|+++.|..++|++++++
T Consensus 13 ~~~~~~~~~~~~~~~---~~~~~~i~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~ 87 (417)
T 3g7q_A 13 RHSGITRLMEDLNDG---LRTPGAIMLGGGNPAHI--PAMQDYFQTLLTDMVESGKAADALCNYDGPQGKTALLNALAVL 87 (417)
T ss_dssp ---CHHHHHHHHHC--------CCEECSCCCCCCC--HHHHHHHHHHHHHHHHHTHHHHHHHSTTCTTSHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHhh---ccCCCceEecCcCCCCC--ChHHHHHHHHHHHHhhCCcccceeeccCCCCCcHHHHHHHHHH
Confidence 456677777666543 23578999999987531 1123677777777765431 23799999999999999999
Q ss_pred HHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC-----eEEee-CCCCCCcHHHHhhc----CCEEEEEeccCC-CC
Q 014769 97 LSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA-----NVLLP-RPGWPYYEGIAQRK----QVEVRHFDLLPE-RN 165 (419)
Q Consensus 97 l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd-----~vlv~-~p~~~~~~~~~~~~----g~~~~~~~~~~~-~~ 165 (419)
+.+.+|.++++++|++|+|++++++.++++++++|| +|+++ +|+|+++...+... +..+...+++.+ .+
T Consensus 88 ~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (417)
T 3g7q_A 88 LRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLEDDLFVSARPNIELLPEGQFK 167 (417)
T ss_dssp HHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----CCEEECCCEEEEEGGGEEE
T ss_pred HHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccchhhhccccCcccccCCcccc
Confidence 999889899999999999999999999999999987 89997 99999876554322 222223333222 24
Q ss_pred cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEE
Q 014769 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i 245 (419)
+.+|++.++ ++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+... ....... ....++++
T Consensus 168 ~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~~~-~~~~~~~-~~~~~~~i 243 (417)
T 3g7q_A 168 YHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPFPG-IIFSEAR-PLWNPNII 243 (417)
T ss_dssp EECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTTTC-CBCSCCC-CCCCTTEE
T ss_pred cccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccccc-ccccccc-cCCCCCEE
Confidence 568888887 6667899999999999999999999999999999999999999999863211 1111111 12245789
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc-hHHHHH-HHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK-EDFFCK-LIDTLRES 322 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~-~~~~~~-~~~~~~~~ 322 (419)
++.|+|| ++++|+|+||++++. ++++.+..... ...+++++.|.++..+++... .....+ .+++++++
T Consensus 244 ~~~s~sK-~~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 314 (417)
T 3g7q_A 244 LCMSLSK-LGLPGSRCGIIIAND--------KTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLSETVIKPFYYQR 314 (417)
T ss_dssp EEEESGG-GTCTTSCCEEEECCH--------HHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHHHHTHHHHHHHH
T ss_pred EEEechh-ccCCCcceEEEEeCH--------HHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHHHHHHHHHHHHH
Confidence 9999999 599999999999864 67787776643 356678899999998887644 233333 66788888
Q ss_pred HHHHHHHhhc-CCC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---------CCeE
Q 014769 323 AEICYDGVKE-IPC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---------KNWL 390 (419)
Q Consensus 323 ~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------~~~~ 390 (419)
++.+.+.|.+ +++ +. +..|.+|+|+|+.++... .+..++...+ .++||.+.||..|+. ++++
T Consensus 315 ~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~~gi~v~~g~~f~~~~~~~~~~~~~~i 388 (417)
T 3g7q_A 315 VQQTIAIIRRYLSEERCL-IHKPEGAIFLWLWFKDLP----ITTELLYQRL-KARGVLMVPGHYFFPGLDKPWPHTHQCM 388 (417)
T ss_dssp HHHHHHHHHHHCCTTTCE-EECCCBSSEEEEECTTCS----SCHHHHHHHH-HHTTEECEEGGGGCTTBSSCCGGGGGEE
T ss_pred HHHHHHHHHHhcccCCce-eeCCCcceEEEEEcCCCC----CCHHHHHHHH-HHCCEEEECchhhCCCCccccccCCCeE
Confidence 8888888876 554 55 447889999999987421 2567777776 678999999998864 4699
Q ss_pred EEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 391 RIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 391 Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
||+++.++++|++++++|+++++++.++
T Consensus 389 Ris~~~~~~~i~~~~~~l~~~l~~~~~~ 416 (417)
T 3g7q_A 389 RMNYVPEPDKIEAGVKILAEEIERAWRE 416 (417)
T ss_dssp EEESCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecCCHHHHHHHHHHHHHHHHHHHhc
Confidence 9999889999999999999999887653
No 58
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=100.00 E-value=6.4e-44 Score=337.35 Aligned_cols=327 Identities=23% Similarity=0.357 Sum_probs=277.3
Q ss_pred HHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH
Q 014769 67 AIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG 146 (419)
Q Consensus 67 a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~ 146 (419)
++.+.+.... ..|+++.|..++|+++++++. ++++++|++|+|+++++..++.+++++||+|+++.|+|.++..
T Consensus 47 ~~~~~~~~~~-~~y~~~~g~~~l~~~la~~~~-----~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~~ 120 (375)
T 3op7_A 47 DFYKKLQGTK-LNYGWIEGSPAFKKSVSQLYT-----GVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLYD 120 (375)
T ss_dssp HHHHHHHTSC-CSSCCTTCCHHHHHHHHTTSS-----SCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHHH
T ss_pred HHHHHHhcCC-cCCCCCCChHHHHHHHHHHhc-----cCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHHH
Confidence 4445555544 378888999999999999873 4678899999999999999999999999999999999999999
Q ss_pred HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 147 IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 147 ~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
.+...|.+++.+++++++++.+|++.++++++++++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.
T Consensus 121 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~ 200 (375)
T 3op7_A 121 IPKSLGAEVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFS 200 (375)
T ss_dssp HHHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCS
T ss_pred HHHHcCCEEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccc
Confidence 99999999999998766678899999999999889999999999999999999999999999999999999999999887
Q ss_pred cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHc
Q 014769 227 FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILE 305 (419)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~ 305 (419)
++ +...+.. ..+++++++|+||.++++|+|+||++++. ++++.++..... ..+++.+.+.++..+++
T Consensus 201 ~~--~~~~~~~--~~~~~i~~~s~sK~~~~~G~r~G~v~~~~--------~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 268 (375)
T 3op7_A 201 EL--DVPSIIE--VYDKGIAVNSLSKTYSLPGIRIGWVAANH--------QVTDILRDYRDYTMICAGVFDDLVAQLALA 268 (375)
T ss_dssp SS--CCCCHHH--HCTTEEEEEESSSSSSCGGGCCEEEECCH--------HHHHHHTTTGGGTTSCCCHHHHHHHHHHHH
T ss_pred cc--CCCchhh--hcCCEEEEeEChhhcCCcccceEEEEeCH--------HHHHHHHHHHhhhccCCCcHHHHHHHHHHh
Confidence 65 2222222 23467999999999988999999999854 688888776543 45667888888888877
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC
Q 014769 306 KTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG 385 (419)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~ 385 (419)
. ...++++.+++++++++.+.+.|++++++. +..|.++++.|+.++.. .+..+++.++++++||.+.||..|+
T Consensus 269 ~-~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~ll~~~gi~v~~g~~~~ 341 (375)
T 3op7_A 269 H-YQEILERNRHILEENLAILDQWIEEEPLVS-YIRPAVVSTSFVKIAVD-----MPMEDFCLQLLQEHGVLLVPGNRFE 341 (375)
T ss_dssp T-HHHHHHHHHHHHHHHHHHHHHHHHHCTTEE-ECCCSSSSCEEEEECCS-----SCHHHHHHHHHHHHCEECEEGGGGT
T ss_pred c-cHHHHHHHHHHHHHHHHHHHHHHhhCCCce-EecCCCeEEEeEEcCCC-----CCHHHHHHHHHHhCCEEEeChhhhC
Confidence 4 346778888889999999999999887877 44788888888888642 2567888888888999999999998
Q ss_pred CCCeEEEEeecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 386 LKNWLRIAFCAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 386 ~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
.++++|++++.+++++++++++|+++++++.++
T Consensus 342 ~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~~~~ 374 (375)
T 3op7_A 342 RDGYVRLGFACEQETLIKGLEKLSQFLRRFDKE 374 (375)
T ss_dssp CTTEEEECCCSCHHHHHHHHHHHHHHHGGGC--
T ss_pred CCCeEEEEecCCHHHHHHHHHHHHHHHHHHhhc
Confidence 889999999888899999999999999887653
No 59
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=100.00 E-value=2.9e-44 Score=344.01 Aligned_cols=374 Identities=15% Similarity=0.142 Sum_probs=291.5
Q ss_pred hhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHHhC-CCCCCCCCCCCCHHHHHHH
Q 014769 16 EHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAVRS-GKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 16 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~~~-~~~~~Y~~~~g~~~lr~~i 93 (419)
+....+.+.++.++....+ ..++++|||+.|.| ......++++.+.+++.+.+.. .....|.+..|..++|+++
T Consensus 8 ~~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~l 83 (412)
T 1ajs_A 8 EVPQAQPVLVFKLIADFRE----DPDPRKVNLGVGAYRTDDCQPWVLPVVRKVEQRIANNSSLNHEYLPILGLAEFRTCA 83 (412)
T ss_dssp TCCCCCCCHHHHHHHHHHT----CCCTTCEECCSCCCCCTTSCCCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHH
T ss_pred hCcccCCchHHHHHHHHhh----cCCCCceeeccceecCCCCCccccHHHHHHHHHhhhChhhccCCCCCCCCHHHHHHH
Confidence 3455667788888775432 24788999999986 3222245678999999888733 2445798888999999999
Q ss_pred HHHHHhhCCCCCCCCcEEE--cccHHHHHHHHHH--HhcCCC-----CeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCC
Q 014769 94 ADYLSRDLPYKLSADDVYV--TLGCKQAVEVILS--VLARPG-----ANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPE 163 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~--~l~~~g-----d~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~ 163 (419)
++++...++..+++++|++ |+|++++++.+++ .++.+| |+|++++|+|+++...+...|.+ ++.+++.++
T Consensus 84 a~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~ 163 (412)
T 1ajs_A 84 SRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHNGVFTTAGFKDIRSYRYWDT 163 (412)
T ss_dssp HHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHHHHHHHTTCSCEEEEECEET
T ss_pred HHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHHHHHHHcCCceeEEEeeecC
Confidence 9999765555567899999 9999999999965 445789 99999999999999999999999 999987654
Q ss_pred CCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC--CCCCCcccc
Q 014769 164 RNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLF 238 (419)
Q Consensus 164 ~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~ 238 (419)
+++.+|++.+++++++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+
T Consensus 164 ~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~ 243 (412)
T 1ajs_A 164 EKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFFDSAYQGFASGNLEKDAWAIRYF 243 (412)
T ss_dssp TTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHH
T ss_pred CCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcccccccCCcccccchHHHHH
Confidence 6678999999988864 55677789999999999999999999999999999999999999988765 122233323
Q ss_pred C-CCCcEEEEecCCCcCCCCCceeEEEEee--CCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----h
Q 014769 239 G-SIVPVITLGSISKRWLVPGWRFGWLVTN--DPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----E 309 (419)
Q Consensus 239 ~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~--~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~ 309 (419)
. ..++++++.|+||.++++|+|+||++++ +++ .. ..+++.+.... ..+.+++.++|.++..+|+... .
T Consensus 244 ~~~~~~~i~~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 320 (412)
T 1ajs_A 244 VSEGFELFCAQSFSKNFGLYNERVGNLTVVAKEPD-SI--LRVLSQMQKIVRVTWSNPPAQGARIVARTLSDPELFHEWT 320 (412)
T ss_dssp HHTTCCEEEEEECTTTSCCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCSHHHHHHHHHHHSHHHHHHHH
T ss_pred hccCCcEEEEEecccccCCCCcceEEEEEecCCHH-HH--HHHHHHHHHHHhcccCCCChHHHHHHHHHHcCcchhHHHH
Confidence 2 2357899999999999899999999982 210 00 01444455432 3334468889999999998642 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
+++++.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ .+++..+++++||.+.|+
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~~l~~~gv~v~~~----- 384 (412)
T 1ajs_A 321 GNVKTMADRILSMRSELRARLEALKTPGTWN-HITDQIGMFSFTGLN----------PKQVEYLINQKHIYLLPS----- 384 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCH-HHHHCCSSEEECCCC----------HHHHHHHHHTTCEECCTT-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-EEcCCCceEEEeCCC----------HHHHHHHHHhCCEEecCC-----
Confidence 4778889999999999999999873 365 446888999997653 356677778899999875
Q ss_pred CCeEEEEee-cCHHHHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAFC-AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 387 ~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~ 415 (419)
+|++++ .+++++++++++|++++++.
T Consensus 385 ---~Ris~~~~~~~~i~~~~~~l~~~l~~~ 411 (412)
T 1ajs_A 385 ---GRINMCGLTTKNLDYVATSIHEAVTKI 411 (412)
T ss_dssp ---SEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred ---cEEEeeeCCHHHHHHHHHHHHHHHHhc
Confidence 499997 58999999999999998763
No 60
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=1e-44 Score=348.74 Aligned_cols=351 Identities=18% Similarity=0.123 Sum_probs=279.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHH--HHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAI--VDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~--~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
...+|||+.|.|... .+|.++.+.+++ .+++... ....|+++.|..++|++|++++ ++++++|++|+|+
T Consensus 32 ~~~~i~~~~G~p~~~-~~p~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 104 (427)
T 3ppl_A 32 KNLKLDLTRGKPSSE-QLDFADELLALPGKGDFKAADGTDVRNYGGLDGIVDIRQIWADLL------GVPVEQVLAGDAS 104 (427)
T ss_dssp TCCCEECCCCSCCHH-HHHTTGGGGGCSCTTCCBCTTSCBTTSSCCSSCCHHHHHHHHHHH------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-HCCCcHHHHHHhhhHHHhhccchhhcCCCCCCCcHHHHHHHHHHh------CCCcceEEEeCCc
Confidence 456899999987531 122233455555 4444332 2468999899999999999999 6788999999999
Q ss_pred HHHH--HHHHHHhcC--C----------CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCc
Q 014769 117 KQAV--EVILSVLAR--P----------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNT 181 (419)
Q Consensus 117 ~~al--~~~~~~l~~--~----------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~ 181 (419)
++++ ..++.+++. + ||+|++++|+|..+...++..|.+++.++++++ ++|++.|+++++ +++
T Consensus 105 ~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~ 181 (427)
T 3ppl_A 105 SLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHFSITERFGFEMISVPMNED---GPDMDAVEELVKNPQV 181 (427)
T ss_dssp HHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHHHHHHHTTCEEEEEEEETT---EECHHHHHHHTTSTTE
T ss_pred HHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHHHHHHHcCCEEEEeCCCCC---CCCHHHHHHHHhcCCC
Confidence 9999 588888876 6 899999999999999999999999999998653 489999999985 467
Q ss_pred cEEEEe-CCCCccccCCCHHHHHHHHHHH-HhCCCeEEEcccccccccCCCCCC--Ccccc----CCCCcEEEEecCCCc
Q 014769 182 AAMVII-NPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGSIPYT--PMGLF----GSIVPVITLGSISKR 253 (419)
Q Consensus 182 ~~v~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~~~~~--~~~~~----~~~~~~i~~~s~sK~ 253 (419)
++++++ +|+||||.++|.+++++|+++| +++|+++|+||+|+.+.|++.... ++..+ +..+++++++||||.
T Consensus 182 ~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~ 261 (427)
T 3ppl_A 182 KGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNAYAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKI 261 (427)
T ss_dssp EEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECTTTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTT
T ss_pred eEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECCCcccccCCCCCCccchhhhhhccCCCCcEEEEechhhc
Confidence 777655 7799999999999999999999 999999999999999887765432 23222 245679999999999
Q ss_pred CCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc-cc-hHHHHHHHHHHHHHHHHHHHHh
Q 014769 254 WLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK-TK-EDFFCKLIDTLRESAEICYDGV 330 (419)
Q Consensus 254 ~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~-~~-~~~~~~~~~~~~~~~~~l~~~l 330 (419)
+++|+|+||++++. ++++.+..... ...+++.+.|.++..+++. .. .+++++.++.++++++.+.+.|
T Consensus 262 -~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L 332 (427)
T 3ppl_A 262 -TLAGAGVSFFLTSA--------ENRKWYTGHAGIRGIGPNKVNQLAHARYFGDAEGVRAVMRKHAASLAPKFNKVLEIL 332 (427)
T ss_dssp -SCTTSSCEEEECCH--------HHHHHHHHHHHHHCSCCCHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -cCcCccEEEEEcCH--------HHHHHHHHHhhcccCCCCHHHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999865 57777776643 3567899999999999986 21 4677788888888888888887
Q ss_pred hc-CC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-CCCCC-----CCCeEEEEeec-CHH
Q 014769 331 KE-IP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG-----LKNWLRIAFCA-EPS 399 (419)
Q Consensus 331 ~~-~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~~Ris~~~-~~~ 399 (419)
.+ ++ ++. +..|.+|+|+|++++.. +..++... +.++||.+.| |..|. .++++||+++. +++
T Consensus 333 ~~~l~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~~~-l~~~gv~v~~~g~~~~~~~~~~~~~~Ris~~~~~~~ 404 (427)
T 3ppl_A 333 DSRLAEYGVAQ-WTVPAGGYFISLDVVPG------TASRVAEL-AKEAGIALTGAGSSYPLRQDPENKNLRLAPSLPPVE 404 (427)
T ss_dssp HHHHGGGTCCE-ECCCSBSSCEEEECSTT------CHHHHHHH-HHHTTEECCCTTTTSGGGCCTTSCEEEECCSSSCHH
T ss_pred HHhcCCCCceE-EeCCCccEEEEEECCcc------hHHHHHHH-HHHCCCEEecCcCcCCCCCCCCCCeEEEECCCCCHH
Confidence 65 32 455 45788999999999742 45566554 4778999999 55554 36899999975 889
Q ss_pred HHHHHHHHHHHHHHHHhcc
Q 014769 400 ALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~~~~ 418 (419)
++++++++|.+++++...+
T Consensus 405 ~i~~~~~~l~~~l~~~~~~ 423 (427)
T 3ppl_A 405 ELEVAMDGVATCVLLAAAE 423 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9999999999999876543
No 61
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=100.00 E-value=1.2e-43 Score=343.01 Aligned_cols=379 Identities=18% Similarity=0.284 Sum_probs=293.1
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCCCee-eccCCCCCCCCCCCChHHHHHHHHHHHhC-------CC----CCCCCCCCCC
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPRPVV-PLGYGDPTAFPCFRTAVEAEDAIVDAVRS-------GK----FNCYATNSGI 86 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i-~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-------~~----~~~Y~~~~g~ 86 (419)
...+..++.++..+.+... .+++| +|+.|.|... .++.+.+.+++.+.+.+ .. ...|+++.|.
T Consensus 11 ~~~~~~~~~~~~~~~~~~~---~~~~i~~l~~g~p~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~g~ 85 (444)
T 3if2_A 11 FTQPTGISQLMDDLGDALK---SDQPVNMLGGGNPAKI--DAVNELFLETYKALGNDNDTGKANSSAIISMANYSNPQGD 85 (444)
T ss_dssp HHSCCHHHHHHHHHHHHHH---SSSCCEECSCCCCCCC--HHHHHHHHHHHHHHHSCSCTTCCCCHHHHHHHSCCCTTCC
T ss_pred ccCchhHHHHHHHHHhhhc---CchhhhccCCCCCCcc--cchHHHHHHHHHHHHhccccccccchhhhhhhccCCCCCC
Confidence 3455678888877765443 47899 9999987531 11236667777776655 31 2479999999
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC--------------eEEee-CCCCCCcHH-----
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA--------------NVLLP-RPGWPYYEG----- 146 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--------------~vlv~-~p~~~~~~~----- 146 (419)
+++|+++++++.+.+|.++++++|++|+|++++++.++.+++++|| +|+++ +|+|..+..
T Consensus 86 ~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~~~~~~~~~~ 165 (444)
T 3if2_A 86 SAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYIGYSDVHVEG 165 (444)
T ss_dssp HHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCGGGTTCCSSS
T ss_pred HHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCccchhhccccc
Confidence 9999999999999899999999999999999999999999999888 78776 999998865
Q ss_pred -HHhhcCCEEEEEeccCCC---CcccChHHHHHh---hcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 147 -IAQRKQVEVRHFDLLPER---NWEVDLDAVEAL---ADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 147 -~~~~~g~~~~~~~~~~~~---~~~~~~~~l~~~---~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
.+...|..+..+++++++ ++.+|++.|+++ +++++++|++++|+||||.++|.+++++|+++|+++|+++|+|
T Consensus 166 ~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~D 245 (444)
T 3if2_A 166 QHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAKRYDIPLIID 245 (444)
T ss_dssp CCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred chhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHHHCCCEEEEE
Confidence 344567777777765422 367999999987 6778899999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHH
Q 014769 220 EVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQG 298 (419)
Q Consensus 220 e~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~ 298 (419)
|+|+.+... ....... ....++++++.|+||. +++|+|+||++++. ++++.+..... ..++++++.|.
T Consensus 246 e~~~~~~~~-~~~~~~~-~~~~~~~i~~~S~sK~-~~~G~r~G~~~~~~--------~l~~~~~~~~~~~~~~~~~~~~~ 314 (444)
T 3if2_A 246 NAYGMPFPN-IIYSDAH-LNWDNNTILCFSLSKI-GLPGMRTGIIVADA--------KVIEAVSAMNAVVNLAPTRFGAA 314 (444)
T ss_dssp CTTCTTTTC-CBCSCCC-CCCCTTEEEEEESTTT-TCGGGCCEEEECCH--------HHHHHHHHHHHHHHSSCCCHHHH
T ss_pred CCCCCcccc-ccccccc-ccCCCCEEEEechhhc-cCCCCceEEEEECH--------HHHHHHHHHHHhccCCCChHHHH
Confidence 999853211 1111111 1224578999999997 89999999999864 67777776643 35677888999
Q ss_pred HHHHHHcccc-hHHHHH-HHHHHHHHHHHHHHHhhc-CCC--CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHh
Q 014769 299 AIPQILEKTK-EDFFCK-LIDTLRESAEICYDGVKE-IPC--ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKE 373 (419)
Q Consensus 299 a~~~~l~~~~-~~~~~~-~~~~~~~~~~~l~~~l~~-~~~--~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 373 (419)
++..+++... .....+ .++.++++++.+.+.|.+ +++ +. +..|.+|+++|+.++... .+..+++..| .+
T Consensus 315 a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~~~~g~~~~~~~~~~~----~~~~~l~~~l-~~ 388 (444)
T 3if2_A 315 IATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDYPLM-IHKPEGAIFLWLWFKDLP----ISTLDLYERL-KA 388 (444)
T ss_dssp HHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSSSEE-EECCCBSSEEEEEETTCS----SCHHHHHHHH-HH
T ss_pred HHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCCce-EecCCccEEEEEEcCCCC----CCHHHHHHHH-HH
Confidence 9988887643 223333 567788888888888876 554 34 446889999999987421 2567777766 67
Q ss_pred cCeEeecCCCCCC----------CCeEEEEeecCHHHHHHHHHHHHHHHHHHhccC
Q 014769 374 ESVIVTPGIYVGL----------KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419 (419)
Q Consensus 374 ~gv~v~~g~~~~~----------~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~~ 419 (419)
+||.+.||+.|.. .+++||+++.++++|++++++|+++++++..+|
T Consensus 389 ~gi~v~~g~~~~~~~~~~~~~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~~~~~ 444 (444)
T 3if2_A 389 KGTLIVPSEYFFPGVDVSDYQHAHECIRMSIAADEQTLIDGIKVIGEVVRELYDNK 444 (444)
T ss_dssp TTEECEEGGGSCTTCCCTTCSGGGSEEEEESSSCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCeEEecchhhcCCCCCcccccCCCeEEEEEeCCHHHHHHHHHHHHHHHHHHHccC
Confidence 8999999998854 268999997799999999999999999887653
No 62
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=100.00 E-value=7.2e-44 Score=337.60 Aligned_cols=379 Identities=14% Similarity=0.095 Sum_probs=277.8
Q ss_pred ccCchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHH
Q 014769 11 FEDKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPA 89 (419)
Q Consensus 11 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~l 89 (419)
.+.++.+.+++++.|..+++...+ + +.++|||++|... ..+..+..+.|++|....++......|.|..|+++|
T Consensus 18 ~~~~~~v~~~p~d~i~~l~~~~~~----d-~~~kinLgvG~y~d~~g~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~l 92 (420)
T 4h51_A 18 AERWQKIQAQAPDVIFDLAKRAAA----A-KGPKANLVIGAYRDEQGRPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPF 92 (420)
T ss_dssp HHHHHTCCCCCCCHHHHHHHHHHH----C-CSSCEECCSCCCBCTTSCBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHH
T ss_pred hHHHhCCCCCCCChHHHHHHHHhc----C-CCCCEEeecCcccCCCCCCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHH
Confidence 344556677888999998876543 2 4458999999321 112345668899998877777666679999999999
Q ss_pred HHHHHHHHHhhCCCCCCCCc--EEEcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCcHHHHhhcCCE-EEEEeccC
Q 014769 90 RRAIADYLSRDLPYKLSADD--VYVTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLP 162 (419)
Q Consensus 90 r~~ia~~l~~~~~~~~~~~~--i~~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~ 162 (419)
|+++++++... ....+. .+.|.|+|.|+..++..+ .+|||+|++++|+|+.|..+++..|.+ +..++...
T Consensus 93 r~aia~~~~g~---~~~~~~~~~~qt~ggtga~~~a~~~l~~~~~~pgd~V~ip~P~w~~y~~i~~~aG~~~V~~~~~~~ 169 (420)
T 4h51_A 93 IDEAVKIIYGN---TVELENLVAVQTLSGTGAVSLGAKLLTRVFDAETTPIYLSDPTWPNHYGVVKAAGWKNICTYAYYD 169 (420)
T ss_dssp HHHHHHHHHC------CGGGEEEEEEEHHHHHHHHHHHHHTTTSCTTTSCEEEEESCCTHHHHHHHHTTCCCEEEEECEE
T ss_pred HHHHHHHhcCC---CccccccceeeecCchHHHHHHHHHHHHhcCCCCCEEEEecCCchhHHHHHHHcCCeEEEeecccc
Confidence 99999998432 223333 355899998887776655 469999999999999999999999987 45555544
Q ss_pred CCCcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc---c
Q 014769 163 ERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM---G 236 (419)
Q Consensus 163 ~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~---~ 236 (419)
...+.+|.+.+.+.+. ++++++++++||||||.+++.++|++|+++|+++++++|+|++|.++.+++...... .
T Consensus 170 ~~~~~~d~~~~~~~l~~~~~~~~vll~~~p~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~ 249 (420)
T 4h51_A 170 PKTVSLNFEGMKKDILAAPDGSVFILHQCAHNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARL 249 (420)
T ss_dssp GGGTEECHHHHHHHHHHSCSSCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHH
T ss_pred ccccCCCHHHHHHHHhccCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHh
Confidence 5567788888777653 456677788999999999999999999999999999999999999998875332111 1
Q ss_pred ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccc-----hH
Q 014769 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTK-----ED 310 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~-----~~ 310 (419)
..+...+++++.||||.|+++|+|+||++++.+.... ...+...+... ....+.++...|.++..++.... .+
T Consensus 250 ~~~~~~~~i~~~s~SK~~~~~G~RvG~~~~~~~~~~~-~~~~~~~l~~~~r~~~s~~p~~~a~~~~~~l~d~~l~~~~~~ 328 (420)
T 4h51_A 250 FARRGIEVLLAQSFSKNMGLYSERAGTLSLLLKDKTK-RADVKSVMDSLIREEYTCPPAHGARLAHLILSNNELRKEWEA 328 (420)
T ss_dssp HHHTTCCCEEEEECTTTSCCGGGCEEEEEEECSCHHH-HHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHHH
T ss_pred HHhhCceEEEEeccccccccccCceEEEEecccCHHH-HHHHHHHHHHhhhcccCcchHHHHHHHHHHhcCHHHHHHHHH
Confidence 1233456899999999999999999999987632100 00122222222 23456778888888888887522 24
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC--CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEI--PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK 387 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~--~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~ 387 (419)
.++.++++++++|+.+.+.|+++ ++ +. ...+++|||.|+.++ . +.++ +|+++||++.|++
T Consensus 329 ~~~~m~~r~~~~R~~l~~~L~~~g~~~~~~-~i~~q~GmF~~~gls---------~-e~v~-~L~e~~Vy~~~~g----- 391 (420)
T 4h51_A 329 ELSAMAERIRTMRRTVYDELLRLQTPGSWE-HVINQIGMFSFLGLS---------K-AQCE-YCQNHNIFITVSG----- 391 (420)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCSSCCT-HHHHCCSSEEECCCC---------H-HHHH-HHHHTTEECCTTC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCC-eecCCCceEEecCcC---------H-HHHH-HHHhCCEEEcCCC-----
Confidence 56778899999999999999875 22 33 236788999997664 2 3344 4588999998864
Q ss_pred CeEEEEe-ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 388 NWLRIAF-CAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 388 ~~~Ris~-~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
|||+ +.++++|+.+.++|.+++++..++
T Consensus 392 ---Ris~Agl~~~ni~~~a~aI~~vvr~i~re 420 (420)
T 4h51_A 392 ---RANMAGLTHETALMLAQTINDAVRNVNRE 420 (420)
T ss_dssp ---EEEGGGCCHHHHHHHHHHHHHHHC-----
T ss_pred ---EEEeccCCHHHHHHHHHHHHHHHHHhhcC
Confidence 9999 579999999999999999887653
No 63
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=100.00 E-value=7.8e-44 Score=344.05 Aligned_cols=376 Identities=16% Similarity=0.155 Sum_probs=289.2
Q ss_pred CchhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHHHH--hCCCCCCCCCCCCCHHH
Q 014769 13 DKQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVDAV--RSGKFNCYATNSGIPPA 89 (419)
Q Consensus 13 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~~~--~~~~~~~Y~~~~g~~~l 89 (419)
..+.+...+++.|..++..+.+ ...+.+|||+.|.| ...+..++.+++.+++.+.. .......|.+..|.+++
T Consensus 24 ~~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~l 99 (448)
T 3meb_A 24 VFSGFPASPPDAILNLTVLYNA----DTNPKKVNLGVGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLF 99 (448)
T ss_dssp TTTTCCCCCCCTTHHHHHHHHH----CCCTTCEEESSCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHH
T ss_pred HHhcCCCCCCChHHHHHHHHHh----CCCCCeEEeecccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHH
Confidence 3444556677778888876543 34566899999987 33233446678888876655 22334589998999999
Q ss_pred HHHHHHHHHhhCCCC---CCCCcEEE--cccHHHHHHH--HHHHhcCCCCeEEeeCCCCCCcHHHHh----hcCCEEEEE
Q 014769 90 RRAIADYLSRDLPYK---LSADDVYV--TLGCKQAVEV--ILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHF 158 (419)
Q Consensus 90 r~~ia~~l~~~~~~~---~~~~~i~~--t~g~~~al~~--~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~ 158 (419)
|+++++++. |.. +++++|++ |+|++++++. .+..++.+||+|++++|+|..+...++ ..|.+++.+
T Consensus 100 r~~ia~~l~---g~~~~~~~~~~i~~~~t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~ 176 (448)
T 3meb_A 100 LEAAQFLMF---GKDSKAAQEGRIASCQSLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEY 176 (448)
T ss_dssp HHHHHHHHH---CTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEE
T ss_pred HHHHHHHhc---CCCccccCcCcEEEEECCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEE
Confidence 999999983 322 22689999 9999999988 456677899999999999999999999 999999999
Q ss_pred eccCCC-CcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CC
Q 014769 159 DLLPER-NWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PY 232 (419)
Q Consensus 159 ~~~~~~-~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~ 232 (419)
++...+ ++.+|++.+++++++ +++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ..
T Consensus 177 ~~~~~~~~~~~d~e~l~~~l~~~~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~ 256 (448)
T 3meb_A 177 TYLRKDGELEIDFSNTKKDIQSAPEKSIFLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADA 256 (448)
T ss_dssp CCBCTTSCSSBCHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHT
T ss_pred eccccccCCCcCHHHHHHHHHhCCCCcEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCc
Confidence 984444 578999999998874 466778899999999999999999999999999999999999999887651 11
Q ss_pred CCcccc-CCCCcEEEEecCCCcCCCCCceeEEE--Ee--------eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHH
Q 014769 233 TPMGLF-GSIVPVITLGSISKRWLVPGWRFGWL--VT--------NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAI 300 (419)
Q Consensus 233 ~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~--~~--------~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~ 300 (419)
.++..+ ....+++++.|+||.|+++|+|+||+ ++ +++. .. .++++.+.... ..+.+++.+.|.++
T Consensus 257 ~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~v~~~~~~~~~~~~~-~~--~~l~~~l~~~~~~~~~~~~~~~~~a~ 333 (448)
T 3meb_A 257 FAVRMFVDAGVEVLVAQSFSKNFGLYGERIGCLHVVHAGVEGSVEKNKA-LS--AAMVSGMTLQIRKTWSMSAIHGAYIV 333 (448)
T ss_dssp HHHHHHHHTTCCEEEEEECTTTSCCGGGCCEEEEEECCCCSSSHHHHHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHH
T ss_pred hhHHHHhhcCCcEEEEecccccCCCccccceeeeeeeccccccccCCHH-HH--HHHHHHHHHHHhcccCCccHHHHHHH
Confidence 222222 23457899999999999999999998 65 3210 00 03555555432 33456788899999
Q ss_pred HHHHcccc-----hHHHHHHHHHHHHHHHHHHHHhhcC--CC------CCCCCCCCceEEEEeecCcccccCCCCHHHHH
Q 014769 301 PQILEKTK-----EDFFCKLIDTLRESAEICYDGVKEI--PC------ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFA 367 (419)
Q Consensus 301 ~~~l~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~--~~------~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~ 367 (419)
..+|.... .+.+++++++++++++.+.+.|+++ ++ +. +..|++|+|+|+.++ .+++
T Consensus 334 ~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~----------~~~~ 402 (448)
T 3meb_A 334 QVIVHDKRLLQMFYDNVKEMSARIHRMRSLLHASLAKRKTPGPGSKGTWD-HILTAIGMFTFTGLT----------PEHV 402 (448)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSTTTCCCT-HHHHCCSSEEECCCC----------HHHH
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCcCcccccc-eeCCCceEEEecCCC----------HHHH
Confidence 88887632 1447888899999999999999876 55 55 347889999997663 3667
Q ss_pred HHHHHhcCeEeecCCCCCCCCeEEEEeec-CHHHHHHHHHHHHHHHHHHh
Q 014769 368 LKLAKEESVIVTPGIYVGLKNWLRIAFCA-EPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 368 ~~ll~~~gv~v~~g~~~~~~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~~ 416 (419)
..+++++||.+.||+. |||++. ++++|++++++|+++++++-
T Consensus 403 ~~ll~~~gV~v~~G~g-------Ris~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 403 DYLKEKWSIYLVKAGG-------RMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp HHHHHHHCEEECSGGG-------EEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCEEEeCCCc-------EEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 7888889999999862 999965 88889999999999998653
No 64
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=100.00 E-value=8.6e-44 Score=349.76 Aligned_cols=373 Identities=15% Similarity=0.224 Sum_probs=284.2
Q ss_pred chhHHHHHHHHHHhhhcCCCCC----eeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHH
Q 014769 22 AVTVKTSLASIIDSVNKNDPRP----VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYL 97 (419)
Q Consensus 22 ~~~i~~~~~~~~~~~~~~~~~~----~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l 97 (419)
...+...+.++.+.....++.+ +|+|+.|.|. + +++.+.+++.+.+.. ..|+++.|..++|+++++++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~l~~g~~~----~-~~~~~~~al~~~~~~---~~Y~~~~g~~~lr~~ia~~~ 151 (546)
T 2zy4_A 80 IDGIEGRFERYIAENRDQEGVRFLGKSLSYVRDQLG----L-DPAAFLHEMVDGILG---CNYPVPPRMLNISEKIVRQY 151 (546)
T ss_dssp STTHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTSC----C-CHHHHHHHHHHHHHT---CSCCSSSSCCHHHHHHHHHH
T ss_pred cccchhHHHHHHHhcCCCCcchhHHhhhecccCCCC----C-CChHHHHHHHHhhhc---CCCCCCcCCHHHHHHHHHHH
Confidence 3577777777766543222222 8999999864 3 346677777777642 47999999999999988765
Q ss_pred -HhhCCCCC---CCCcEEEcccHHHHHHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhh--cCCEEEEEeccCCCCc
Q 014769 98 -SRDLPYKL---SADDVYVTLGCKQAVEVILSV-----LARPGANVLLPRPGWPYYEGIAQR--KQVEVRHFDLLPERNW 166 (419)
Q Consensus 98 -~~~~~~~~---~~~~i~~t~g~~~al~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~--~g~~~~~~~~~~~~~~ 166 (419)
.++.+.+. ++++|++|+|+++++..++.+ ++++||+|++++|+|+.+...+.. .|.+++.++++++++|
T Consensus 152 ~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~~~~~~g~~~~~v~~~~~~~~ 231 (546)
T 2zy4_A 152 IIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIPELAQYALEEVAINADPSLNW 231 (546)
T ss_dssp HHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHHHSTTSCCEEEEEECBGGGTT
T ss_pred HHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHHHHcCCCcEEEEEecCcccCC
Confidence 44444322 568999999999999999988 578999999999999999877544 4678888888777778
Q ss_pred ccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHH--HhCCCeEEEcccccccccCCCCCCCccccCCCCcE
Q 014769 167 EVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMA--RKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPV 244 (419)
Q Consensus 167 ~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~--~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 244 (419)
.+|++.|++++.++++++++++|+||||.+++.+++++|+++| +++|++||+||+|+.+.++ ..++.... .+++
T Consensus 232 ~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y~~~~~~---~~s~~~~~-~~~~ 307 (546)
T 2zy4_A 232 QYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVYGTFADD---FQSLFAIC-PENT 307 (546)
T ss_dssp BCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTTGGGSTT---CCCHHHHC-GGGE
T ss_pred CCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcchhhccc---CcCHHHhC-CCCE
Confidence 8999999988877889999999999999999999999999999 8899999999999998753 22333322 2578
Q ss_pred EEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------------h------------------------c
Q 014769 245 ITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------------L------------------------S 287 (419)
Q Consensus 245 i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------------~------------------------~ 287 (419)
+++.||||.++++|+|+||+++++++ +++.+... . .
T Consensus 308 i~~~S~SK~~g~~GlRiG~~~~~~~~-------l~~~l~~~~p~~~~~~l~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 380 (546)
T 2zy4_A 308 LLVYSFSKYFGATGWRLGVVAAHQQN-------VFDLALDKLQESEKVALDHRYRSLLPDVRSLKFIDRLVADSRAVALN 380 (546)
T ss_dssp EEEEESTTTTTCGGGCEEEEEEESSC-------HHHHHHHTSCHHHHHHHHHHHTTTCSCGGGCCHHHHHHHHTTTTTTG
T ss_pred EEEEeCccccCCCCcceEEEEECCHH-------HHHHHHhhcchhhhHHHHHHhhhccccccchhhhhhhhhhhHHHHhh
Confidence 99999999999999999999997631 44443210 0 1
Q ss_pred cccCCchHHHHHH-----HHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc--ccC-
Q 014769 288 IYSDIPTFIQGAI-----PQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL--LED- 359 (419)
Q Consensus 288 ~~~~~~~~~~~a~-----~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~~- 359 (419)
.+.+.+.+.|.++ .++++.. ..+.++.++.++++++.+.+.|. + ++. +..|++|+|+|++++... ..+
T Consensus 381 ~~~~~s~~~Q~a~a~~a~~all~~~-~~~~~~~r~~~~~r~~~l~~~L~-~-~~~-~~~~~~~~~l~~~l~~~~~~~~~~ 456 (546)
T 2zy4_A 381 HTAGLSTPQQVQMALFSLFALMDEA-DEYKHTLKQLIRRRETTLYRELG-M-PPL-RDENAVDYYTLIDLQDVTAKLYGE 456 (546)
T ss_dssp GGCSSCHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHHHHGGGT-S-SCC-CCTTBCCSEEEEEHHHHHHHHHCH
T ss_pred ccCCCCcHHHHHHHHHHHHHHHhcc-HHHHHHHHHHHHHHHHHHHHhcC-C-Ccc-cCCCCeeEEEEEEHHHhhcccccH
Confidence 2345677777764 3445432 57788889999999999999886 4 444 346789999999885310 000
Q ss_pred --------CCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeec-CHHHHHHHHHHHHHHHHHHhc
Q 014769 360 --------INDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCA-EPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 360 --------~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~~~ 417 (419)
..++.+++.+++.++||.+.||..|+. .+++||+++. +++++++++++|+++++++.+
T Consensus 457 ~~~~wl~~~~~~~~~l~~ll~~~gV~v~pG~~F~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~~~ 524 (546)
T 2zy4_A 457 AFSEWAVKQSSTGDMLFRIADETGIVLLPGRGFGSNRPSGRASLANLNEYEYAAIGRALRKMADELYA 524 (546)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHSCCCEESSCTTCSSCEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhccCCHHHHHHHHHHHCCEEEeCccccCCCCCeEEEEeccCCHHHHHHHHHHHHHHHHHHHH
Confidence 013456667778899999999999976 5789999975 889999999999999987753
No 65
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=100.00 E-value=2.7e-43 Score=330.42 Aligned_cols=323 Identities=19% Similarity=0.306 Sum_probs=264.9
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
.++|+|+.|.+. +++++.+ ++ .....|+++ +..++|+++++++ ++++++|++|+|++++++
T Consensus 29 ~~~i~l~~~~~~----~~~~~~v------a~--~~~~~Y~~~-~~~~lr~~la~~~------~~~~~~v~~~~G~~~ai~ 89 (356)
T 1fg7_A 29 NGDVWLNANEYP----TAVEFQL------TQ--QTLNRYPEC-QPKAVIENYAQYA------GVKPEQVLVSRGADEGIE 89 (356)
T ss_dssp TCSEECSSCCCS----SCCCCCC------CC--CCTTSCCCS-SCHHHHHHHHHHH------TSCGGGEEEESHHHHHHH
T ss_pred CceEEeeCCCCC----CCCCHhH------hh--hhhccCCCc-cHHHHHHHHHHHh------CCChHHEEEcCCHHHHHH
Confidence 468999999753 3334444 12 234689875 5899999999999 677899999999999999
Q ss_pred HHHHHhcCCC-CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 122 VILSVLARPG-ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 122 ~~~~~l~~~g-d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
.++++++++| |+|++++|+|+++...++..|.+++.++++ .++.+|+++++++++ +++++++++|+||||.++|.+
T Consensus 90 ~~~~~~~~~g~d~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~ 166 (356)
T 1fg7_A 90 LLIRAFCEPGKDAILYCPPTYGMYSVSAETIGVECRTVPTL--DNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQ 166 (356)
T ss_dssp HHHHHHCCTTTCEEEECSSSCTHHHHHHHHHTCEEEECCCC--TTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHH
T ss_pred HHHHHHhCCCCCEEEEeCCChHHHHHHHHHcCCEEEEeeCC--CCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999 999999999999999999999999888875 356789999999887 789999999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
++++|+++|+ +|+++|+||+|..+.. + .++..+ +..++++++.|+||.|+++|+|+||+++++ +++
T Consensus 167 ~l~~l~~~~~-~~~~li~De~~~~~~~-~---~~~~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~ 233 (356)
T 1fg7_A 167 DFRTLLELTR-GKAIVVADEAYIEFCP-Q---ASLAGWLAEYPHLAILRTLSKAFALAGLRCGFTLANE--------EVI 233 (356)
T ss_dssp HHHHHHHHHT-TTCEEEEECTTGGGSG-G---GCSGGGTTTCTTEEEEEESSSTTCCGGGCCEEEEECH--------HHH
T ss_pred HHHHHHHhCC-CCCEEEEEccchhhcC-C---CcHHHHHhhCCCEEEEecchHhhcCchhhhEEEEeCH--------HHH
Confidence 9999999999 9999999999998652 1 122222 334578999999999999999999999854 677
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .++++.++|.++.++++....+++++.+++++++++.+.+.|++++++..+ .|.+|+|+|++++
T Consensus 234 ~~l~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~------ 305 (356)
T 1fg7_A 234 NLLMKVIA-PYPLSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCVEQV-FDSETNYILARFK------ 305 (356)
T ss_dssp HHHHHHSC-SSCSCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTEEEE-CCCSSSEEEEEET------
T ss_pred HHHHHhcC-CCCCCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEE-CCCCCeEEEEECC------
Confidence 77776654 347888999999888875222338888999999999999999988553213 5678889999885
Q ss_pred CCCHHHHHHHHHHhcCeEeec-CCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTP-GIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~-g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+..++..+| .++||.+.| |..|+.++++||++++ +++++++++.|+++
T Consensus 306 --~~~~l~~~L-~~~gI~v~~~g~~~~~~~~iRis~~~-~~e~~~~~~~l~~~ 354 (356)
T 1fg7_A 306 --ASSAVFKSL-WDQGIILRDQNKQPSLSGCLRITVGT-REESQRVIDALRAE 354 (356)
T ss_dssp --THHHHHHHH-HHTTEECEECTTSTTCTTEEEEECCC-HHHHHHHHHHHHTC
T ss_pred --CHHHHHHHH-HHCCEEEEECCCCCCCCCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 356777777 678999999 8888877899999984 78999999888753
No 66
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=100.00 E-value=3.3e-44 Score=343.61 Aligned_cols=373 Identities=14% Similarity=0.118 Sum_probs=286.6
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCC-CCCCCCCChHHHHHHHHH-HHhCCCCCCCCCCCCCHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDP-TAFPCFRTAVEAEDAIVD-AVRSGKFNCYATNSGIPPARRAIA 94 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~-~~~~~~~~~~~v~~a~~~-~~~~~~~~~Y~~~~g~~~lr~~ia 94 (419)
.....++.+..+...+.+ ..++++|||+.|.| ...+..++++.+.+++.+ .+.......|++..|..++|++++
T Consensus 8 ~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~d~~~~~~~~~~v~~a~~~~~~~~~~~~~y~~~~g~~~lr~~ia 83 (412)
T 1yaa_A 8 IELLPPDALFGIKQRYGQ----DQRATKVDLGIGAYRDDNGKPWVLPSVKAAEKLIHNDSSYNHEYLGITGLPSLTSNAA 83 (412)
T ss_dssp CCCCCCCTTHHHHHHHHT----CCCSSCEECSSCCCBCTTSCBCCCHHHHHHHHHHHTCTTCCCCCCCTTCCHHHHHHHH
T ss_pred CcccCCCcHHHHHHHHhc----CCCCCeEEEeeeeeeCCCCCCCCcHHHHHHHHhhhcCcccccCCCCCCCcHHHHHHHH
Confidence 445556677777765433 24678999999986 222233567899999998 876444557988889999999999
Q ss_pred HHHHhhCCCCCCCCcEEE--cccHHHHHHHHH--HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccCh
Q 014769 95 DYLSRDLPYKLSADDVYV--TLGCKQAVEVIL--SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDL 170 (419)
Q Consensus 95 ~~l~~~~~~~~~~~~i~~--t~g~~~al~~~~--~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (419)
+++.+.+|..+++++|++ |+|++++++.++ ..+..+||+|++++|+|+++...++..|.+++.+++...+++.+|+
T Consensus 84 ~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~ 163 (412)
T 1yaa_A 84 KIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHMAIFENQGLKTATYPYWANETKSLDL 163 (412)
T ss_dssp HHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHHHHHHTTTCCEEEEECEETTTTEECH
T ss_pred HHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHHHHHHHcCceEEEEeeecCCCCccCH
Confidence 999765665567899999 999999999984 3344699999999999999999999999999999872233578999
Q ss_pred HHHHHhhcCC--ccEE-EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC--CCCCCccccC-CCC--
Q 014769 171 DAVEALADKN--TAAM-VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS--IPYTPMGLFG-SIV-- 242 (419)
Q Consensus 171 ~~l~~~~~~~--~~~v-~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~--~~~~~~~~~~-~~~-- 242 (419)
+.+++++++. ++.+ ++++|+||||.+++.+++++|+++|+++|+++|+||+|..+.+++ ....++..+. ..+
T Consensus 164 ~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (412)
T 1yaa_A 164 NGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGFATGDLDKDAYAVRLGVEKLSTV 243 (412)
T ss_dssp HHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTSSSCHHHHTHHHHHHHHHTTTT
T ss_pred HHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCcccchhHHHHHHHhcCCCC
Confidence 9999888653 2444 459999999999999999999999999999999999999988764 1122222221 123
Q ss_pred -cEEEEecCCCcCCCCCceeEEEE--e----eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----h
Q 014769 243 -PVITLGSISKRWLVPGWRFGWLV--T----NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----E 309 (419)
Q Consensus 243 -~~i~~~s~sK~~~~~G~r~G~~~--~----~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~ 309 (419)
++++++|+||.++++|+|+||++ + ++++ .. ..+++.+.... ..+.+++.+.|.++.++|+... .
T Consensus 244 ~~~i~~~s~sK~~~~~GlriG~~~~~~~~~~~~~~-~~--~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 320 (412)
T 1yaa_A 244 SPVFVCQSFAKNAGMYGERVGCFHLALTKQAQNKT-IK--PAVTSQLAKIIRSEVSNPPAYGAKIVAKLLETPELTEQWH 320 (412)
T ss_dssp CCEEEEEECTTTSCCGGGCEEEEEEECCSCTTHHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSHHHHHHHH
T ss_pred cceEEEeccCCCCCCcCCcceEEEEEecCCCCCHH-HH--HHHHHHHHHHHhhccCCCChHHHHHHHHHhCCHHHHHHHH
Confidence 68999999999988899999998 6 1210 00 01666666632 3345668889999999998642 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
+++++.+++++++++.+.+.|++++ ++. +..|.+|+|+|+.++ ... +.++++++||.+.|
T Consensus 321 ~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~-~~~~l~~~gi~v~~------ 383 (412)
T 1yaa_A 321 KDMVTMSSRITKMRHALRDHLVKLGTPGNWD-HIVNQCGMFSFTGLT---------PQM-VKRLEETHAVYLVA------ 383 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCSSCCT-HHHHCCSSEEECCCC---------HHH-HHHHHHHHCEECCT------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhCCCCCee-eeccCceEEEeeCCC---------HHH-HHHHHHhCCEEecc------
Confidence 4788889999999999999998863 366 447888999997653 333 47777888999987
Q ss_pred CCeEEEEeec-CHHHHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAFCA-EPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 387 ~~~~Ris~~~-~~~~l~~~l~~l~~~~~~~ 415 (419)
++||+++. +++++++++++|+++++.+
T Consensus 384 --~~Ris~~~~~~~~i~~~~~~l~~~~~~~ 411 (412)
T 1yaa_A 384 --SGRASIAGLNQGNVEYVAKAIDEVVRFY 411 (412)
T ss_dssp --TSEEEGGGCCTTTHHHHHHHHHHHHHHC
T ss_pred --CcEEEEccCCHhHHHHHHHHHHHHHHhh
Confidence 46999974 8999999999999988753
No 67
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=100.00 E-value=6.9e-43 Score=328.89 Aligned_cols=336 Identities=16% Similarity=0.276 Sum_probs=272.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+++++|||+.|.+. +++++.+.+++.+.+.. ...|++ .|..++|+++++++ ++++++|++|+|++++
T Consensus 22 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~v~~~~g~~~a 88 (364)
T 1lc5_A 22 SPDQLLDFSANINP----LGMPVSVKRALIDNLDC--IERYPD-ADYFHLHQALARHH------QVPASWILAGNGETES 88 (364)
T ss_dssp CGGGSEECSSCCCT----TCCCHHHHHHHHHTGGG--GGSCCC-TTCHHHHHHHHHHH------TSCGGGEEEESSHHHH
T ss_pred CccceEEeccccCC----CCCCHHHHHHHHHHHHH--hhcCCC-CCHHHHHHHHHHHH------CcCHHHEEECCCHHHH
Confidence 36679999999843 45678999999888754 357866 58999999999999 5678899999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++.++ +||+|+++.|+|+++...++..|.+++.+++++++++.+ ++.+.+.++++++++++++|+||||.++|.
T Consensus 89 l~~~~~~~--~gd~vl~~~p~y~~~~~~~~~~g~~~~~v~~~~~~~~~~-l~~~~~~~~~~~~~v~i~~p~nptG~~~~~ 165 (364)
T 1lc5_A 89 IFTVASGL--KPRRAMIVTPGFAEYGRALAQSGCEIRRWSLREADGWQL-TDAILEALTPDLDCLFLCTPNNPTGLLPER 165 (364)
T ss_dssp HHHHHHHH--CCSEEEEEESCCTHHHHHHHHTTCEEEEEECCGGGTTCC-CTTHHHHCCTTCCEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHc--CCCeEEEeCCCcHHHHHHHHHcCCeEEEEeCCcccccch-hHHHHHhccCCCCEEEEeCCCCCCCCCCCH
Confidence 99999999 679999999999999999999999999998865334444 566666666678889999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE-eeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV-TNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~-~~~~~~~~~~~~~ 278 (419)
+++++|+++|+++|+++|+||+|+.+.+++... +..++..++++++.|+||.++++|+|+||++ +++ ++
T Consensus 166 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~--~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~--------~~ 235 (364)
T 1lc5_A 166 PLLQAIADRCKSLNINLILDEAFIDFIPHETGF--IPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDD--------AA 235 (364)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCS--GGGCTTCTTEEEEEESTTTTTCTTTCCEEEECCCH--------HH
T ss_pred HHHHHHHHHhhhcCcEEEEECcChhhccCccch--hhHhccCCCEEEEEECchhhcCCccceEEEEECCH--------HH
Confidence 999999999999999999999999987753222 2223444578999999999988999999999 654 57
Q ss_pred HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
++.++.... +++++.+++.++.++++. .+++++.+++++++++.+.+.|+++|++. + .+..|+|+|++++.
T Consensus 236 ~~~l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~-~~~~g~~~~~~~~~---- 306 (364)
T 1lc5_A 236 MARMRRQQM-PWSVNALAALAGEVALQD--SAWQQATWHWLREEGARFYQALCQLPLLT-V-YPGRANYLLLRCER---- 306 (364)
T ss_dssp HHHHHHHSC-TTCSCHHHHHHHHHGGGC--HHHHHHHHHHHHHHHHHHHHHHHTSTTEE-E-CCCSSSEEEEEESC----
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHHhC--cHHHHHHHHHHHHHHHHHHHHHhcCCCCE-E-CCCCCeEEEEECCC----
Confidence 777776544 467889999999999886 46888899999999999999999888877 4 34556788888763
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..++...|+ ++||.+.||..|+. ++++||+++. +++++++++.|+++++++
T Consensus 307 ---~~~~l~~~l~-~~gi~v~~g~~~~~~~~~~iRis~~~-~~~~~~l~~~l~~~~~~~ 360 (364)
T 1lc5_A 307 ---EDIDLQRRLL-TQRILIRSCANYPGLDSRYYRVAIRS-AAQNERLLAALRNVLTGI 360 (364)
T ss_dssp ---TTCCHHHHHH-TTTEECEECTTSTTCCTTEEEEECCC-HHHHHHHHHHHHHHC---
T ss_pred ---cHHHHHHHHH-HCCcEEeeCcccCCCCCCEEEEEeCC-HHHHHHHHHHHHHHhhcc
Confidence 2335666664 56999999998853 5899999874 677888888888887665
No 68
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=100.00 E-value=1.8e-43 Score=347.50 Aligned_cols=358 Identities=18% Similarity=0.230 Sum_probs=282.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhh-CC-CCCC-CCcEEEcccHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRD-LP-YKLS-ADDVYVTLGCKQA 119 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~-~~-~~~~-~~~i~~t~g~~~a 119 (419)
++|+|+.|.|. ++ ++.+++++.+.+... ..|.+..|..++|+++++++.+. .+ ..+. +++|++|+|++++
T Consensus 104 ~~i~l~~g~~~----~~-~~~~v~a~~~~~~~~--~y~~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~a 176 (533)
T 3f6t_A 104 DAVNYCHTELG----LN-RDKVVAEWVNGAVAN--NYPVPDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAA 176 (533)
T ss_dssp HHHHHHHHTTC----CC-HHHHHHHHHHHHHTC--SCCSSSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHH
T ss_pred hheeccCCCCC----cC-CcHHHHHHHHHHHhC--CCCCCcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHH
Confidence 47899999864 33 566666666666542 23447789999999999999765 34 4444 4799999999999
Q ss_pred HHHHHHH-----hcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC--CCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769 120 VEVILSV-----LARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP--ERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (419)
Q Consensus 120 l~~~~~~-----l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 192 (419)
+..++.+ ++++||+|++++|+|.++...+...|.+++.++++. +.++.+|++.|++++++++++|++++|+||
T Consensus 177 l~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NP 256 (533)
T 3f6t_A 177 IVYAFHSLAENHLLKKGDKIAINEPIFTPYLRIPELKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNP 256 (533)
T ss_dssp HHHHHHHHHHTTSSCTTCEEEEESSCCHHHHTSGGGGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTT
T ss_pred HHHHHHHhhhhhccCCcCEEEEcCCCcHHHHHHHHHcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCC
Confidence 9999998 788999999999999999999999999999998865 567899999999999888999999999999
Q ss_pred cccCCCHHHHHHHHHHHH-hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 193 CGNVFTYHHLQEIAEMAR-KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~-~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
||.++|.+++++|+++|+ ++|+++|+||+|+.+.++.. ++.... .+++++++||||.++++|+|+||+++++...
T Consensus 257 tG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~~~~~---~~~~~~-~~~~i~~~S~SK~~g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 257 TSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFVPNFK---SIYSVV-PYNTMLVYSYSKLFGCTGWRLGVIALNEKNV 332 (533)
T ss_dssp TCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGSTTCC---CHHHHS-GGGEEEEEESHHHHTCGGGCEEEEEEESSCH
T ss_pred CccccCHHHHHHHHHHHHhCCCCEEEEcCCccccccCcc---CHhhcC-CCCEEEEecCcccCCCcccceEEEEECcHHH
Confidence 999999999999999999 68999999999998876432 222222 3578999999999999999999999986421
Q ss_pred ccchhhHHH--------------------------------HHHhhh-ccccCCchHHHHH----HHHHHc-----ccch
Q 014769 272 IFQKSGIID--------------------------------SIKDCL-SIYSDIPTFIQGA----IPQILE-----KTKE 309 (419)
Q Consensus 272 ~~~~~~~~~--------------------------------~l~~~~-~~~~~~~~~~~~a----~~~~l~-----~~~~ 309 (419)
+- .+++ .++... ..+.+++.+.|.+ +..+|. ....
T Consensus 333 ~~---~li~~l~~~~~~~~~~~~~~~~~~p~~~~~i~rl~~~~~~~~~~~~~~~~~~~q~a~a~~a~~~L~~~~g~~~~~ 409 (533)
T 3f6t_A 333 FD---DNIAHLDKVELRQLHKRYSSVVLDPDKMKFIDRLCADSRSIGLYHTAGLSTPQQIMEALFSMTHLLTSTNGGSDD 409 (533)
T ss_dssp HH---HHHHTSCHHHHHHHHHHHHTTCSCGGGCCHHHHHHHHHTTTTTGGGCSCCHHHHHHHHHHHHHHHTTCBGGGTBC
T ss_pred HH---HHHHhcchhhHHHHHhhhhccccCcchhhhHHHHHHHHHHHHHhcccCCChHHHHHHHHHHHHHHhhhccccchH
Confidence 00 1221 122222 2355678888877 345564 2235
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc--cC---------CCCHHHHHHHHHHhcCeEe
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL--ED---------INDDIEFALKLAKEESVIV 378 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~--~~---------~~~~~~~~~~ll~~~gv~v 378 (419)
.++++.+++++++++.+.+.|. + ++. +..|.+|+|+|+.++.... .+ ..++.+++.++++++||.+
T Consensus 410 ~~~~~~~~~~~~r~~~l~~~L~-~-~~~-~~~~~~g~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~ll~~~GV~v 486 (533)
T 3f6t_A 410 PYIDIARKLVSERYDQLHDAMQ-A-PKD-ETDTNTHYYSLIDIYRLAEKIYGKEFRDYLTNNFEQVDFLLKLAEKNGVVL 486 (533)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT-C-CCC-CSTTBCCSEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-C-Ccc-ccCCCceEEEEEehHhhhhhccchHHHHHhhccCCHHHHHHHHHHhCCEEE
Confidence 7889999999999999999997 6 566 5588999999998863100 00 0146678888888999999
Q ss_pred ecCCCCCC-CCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 379 TPGIYVGL-KNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 379 ~~g~~~~~-~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.||+.|+. .+++|+|++ .+++++++++++|.++++++.+
T Consensus 487 ~pg~~f~~~~~~iRls~a~~~~e~i~~~i~~L~~~l~~~~~ 527 (533)
T 3f6t_A 487 VDGVGFGAKPGELRVSQANLPTEDYALIGKQVLELLKEYYE 527 (533)
T ss_dssp CTTEEECSSTTEEEEESSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred eCCcccCCCCCEEEEEEeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999987 689999996 5899999999999999988754
No 69
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=100.00 E-value=2.1e-42 Score=325.19 Aligned_cols=334 Identities=17% Similarity=0.246 Sum_probs=272.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+++++|||+.|.+. +++++.+.+++.+.+.. ...|+. .+..++|+++++++ ++++++|++|+|++++
T Consensus 24 ~~~~~idl~~~~~~----~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~l~~~la~~~------~~~~~~i~~~~g~t~a 90 (361)
T 3ftb_A 24 KGRELLDYSSNINP----LGIPKSFLNNIDEGIKN--LGVYPD-VNYRRLNKSIENYL------KLKDIGIVLGNGASEI 90 (361)
T ss_dssp ----CEETTCCCCT----TCSCHHHHTTHHHHHHG--GGSCCC-TTCHHHHHHHHHHH------TCCSCEEEEESSHHHH
T ss_pred CCCCEEEecCCCCC----CCCCHHHHHHHHHHHHH--hcCCCC-ccHHHHHHHHHHHh------CCCcceEEEcCCHHHH
Confidence 47889999999753 56789999999998875 346754 68999999999999 6788999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
++.++.++ |+|+++.|+|.++...++..|.+++.++++++. .++++.+++++++ ++++++++|+||||.++|.
T Consensus 91 l~~~~~~~----d~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~~~l~~~l~~-~~~v~i~~p~nptG~~~~~ 163 (361)
T 3ftb_A 91 IELSISLF----EKILIIVPSYAEYEINAKKHGVSVVFSYLDENM--CIDYEDIISKIDD-VDSVIIGNPNNPNGGLINK 163 (361)
T ss_dssp HHHHHTTC----SEEEEEESCCTHHHHHHHHTTCEEEEEECCTTS--CCCHHHHHHHTTT-CSEEEEETTBTTTTBCCCH
T ss_pred HHHHHHHc----CcEEEecCChHHHHHHHHHcCCeEEEeecCccc--CCCHHHHHHhccC-CCEEEEeCCCCCCCCCCCH
Confidence 99999988 999999999999999999999999999987543 4677999999987 9999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++++|+++|+++|+++|+||+|.++.++ .........+..+++++++|+||.++++|+|+||+++.+ ++++
T Consensus 164 ~~l~~i~~~~~~~~~~li~De~~~~~~~~-~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~g~~~~~~-------~~~~ 235 (361)
T 3ftb_A 164 EKFIHVLKLAEEKKKTIIIDEAFIEFTGD-PSSSFVGEIKNYSCLFIIRAMTKFFAMPGIRFGYGITNN-------KEIA 235 (361)
T ss_dssp HHHHHHHHHHHHHTCEEEEECSSGGGTCC-TTSSSGGGTTTCSSEEEEEESSSTTSCGGGCCEEEEESC-------HHHH
T ss_pred HHHHHHHHHhhhcCCEEEEECcchhhcCC-cccchhHhcccCCCEEEEeeChhhcCCCCcceeEEEeCC-------HHHH
Confidence 99999999999999999999999998876 333333344455678999999999988999999998433 2677
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... +++++++.+.++..+++. .+++++.+++++++++.+.+.|+++|++..+ .+..|.|+|++++.
T Consensus 236 ~~~~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~~~~~~~~~~~~~----- 306 (361)
T 3ftb_A 236 AKIKAKQN-PWNINCFAEMAAINCLKD--TNYIEESLLWIKKERKRFIEELNKIGFIKRV-FSPHANFVLCRLEN----- 306 (361)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHTSSC--HHHHHHHHHHHHHHHHHHHHHHHHSSSEEEE-ECCSSSEEEEEESS-----
T ss_pred HHHHhhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhCCCCcee-cCCCCeEEEEEcCC-----
Confidence 88876654 467889999999999885 5788999999999999999999988777512 34446678888864
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
.+..++...|++ +||.+.||..|+. ++++|++++ ++++++++++.|+++.+
T Consensus 307 -~~~~~l~~~l~~-~gi~v~~g~~~~~~~~~~iRis~~-~~~~~~~l~~~l~~~~~ 359 (361)
T 3ftb_A 307 -ISGEKLYDSLLK-EDIVIRRCCNFIGLDDSFVRFAIK-DEKKNTKFLRALKGVEN 359 (361)
T ss_dssp -SCHHHHHHHHHT-TTEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHH-CCeEEeeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHh
Confidence 256778877755 5999999998864 689999998 45566666666665544
No 70
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=100.00 E-value=1e-43 Score=341.44 Aligned_cols=350 Identities=18% Similarity=0.209 Sum_probs=277.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHH--HHHhCC-CCCCC-CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIV--DAVRSG-KFNCY-ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~--~~~~~~-~~~~Y-~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
...+|||+.|.|... .+|.++.+.+++. +.+..+ ....| +++.|.+++|+++++++ ++++++|++|+|+
T Consensus 24 ~~~~i~l~~g~p~~~-~~~~~~~v~~a~~~~~~~~~~~~~~~Yp~~~~g~~~lr~~ia~~~------~~~~~~i~~t~G~ 96 (423)
T 3ez1_A 24 RGLNLNMQRGQPADA-DFDLSNGLLTVLGAEDVRMDGLDLRNYPGGVAGLPSARALFAGYL------DVKAENVLVWNNS 96 (423)
T ss_dssp HTCCEESCCCCCCHH-HHHTTGGGGGSCCGGGCEETTEETTSSCSCTTCCHHHHHHHHHHT------TSCGGGEEECSSC
T ss_pred CCceEecCCCCCChH-hCCCcHHHHHHHhhhHHhhcchhhhCCCCCCCChHHHHHHHHHHh------CCChhhEEEeCCc
Confidence 456799999987521 1456667777775 444422 24689 88899999999999998 6788999999999
Q ss_pred HHHHH--HHHHHhcC--C---------CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh--cCCc
Q 014769 117 KQAVE--VILSVLAR--P---------GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNT 181 (419)
Q Consensus 117 ~~al~--~~~~~l~~--~---------gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~ 181 (419)
++++. .++++++. + ||+|++++|+|..+...++..|.+++.++++++ ++|++.|++++ .+++
T Consensus 97 ~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~v~~~~~---g~d~~~l~~~l~~~~~~ 173 (423)
T 3ez1_A 97 SLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHFLLLQTLGFELLTVDMQSD---GPDVDAVERLAGTDPSV 173 (423)
T ss_dssp HHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHHHHHHHHTCEEEEEEEETT---EECHHHHHHHHHSCTTE
T ss_pred HHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHHHHHHHcCCEEEeccCCCC---CCCHHHHHHHHhhCCCc
Confidence 99998 88888877 7 599999999999999999999999999998643 58999999999 4567
Q ss_pred cEEEEe-CCCCccccCCCHHHHHHHHHHH-HhCCCeEEEcccccccccCC-C--CCCCcccc----CCCCcEEEEecCCC
Q 014769 182 AAMVII-NPGNPCGNVFTYHHLQEIAEMA-RKLRVMVVADEVYGHLTFGS-I--PYTPMGLF----GSIVPVITLGSISK 252 (419)
Q Consensus 182 ~~v~i~-~p~nptG~~~~~~~l~~i~~~~-~~~~~~li~De~~~~~~~~~-~--~~~~~~~~----~~~~~~i~~~s~sK 252 (419)
++|+++ +|+||||.+++.+++++|+++| +++|+++|+||+|..+.+.+ . ...++..+ +..+++++++||||
T Consensus 174 ~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK 253 (423)
T 3ez1_A 174 KGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDAYRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSK 253 (423)
T ss_dssp EEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECTTSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTT
T ss_pred eEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECCcchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchh
Confidence 777654 8899999999999999999999 99999999999999765544 2 22233222 34567999999999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcc--cc-hHHHHHHHHHHHHHHHHHHH
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEK--TK-EDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~--~~-~~~~~~~~~~~~~~~~~l~~ 328 (419)
. +++|+|+||+++++ ++++.++.... ..++++.+.|.++..+++. .. .+++++.++.++++++.+.+
T Consensus 254 ~-~~~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 324 (423)
T 3ez1_A 254 I-TFAGAGLGFVASSE--------DNIRWLSKYLGAQSIGPNKVEQARHVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDE 324 (423)
T ss_dssp T-SCSSSSCEEEEECH--------HHHHHHHHHHHHSCSCCCHHHHHHHHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred h-ccCCcceEEEEeCH--------HHHHHHHHHHhhhccCCCHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHH
Confidence 8 79999999999865 67788776653 3567889999999888876 22 46777778888888888777
Q ss_pred Hhhc----CC-CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-CCCCC-----CCCeEEEEeec-
Q 014769 329 GVKE----IP-CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP-GIYVG-----LKNWLRIAFCA- 396 (419)
Q Consensus 329 ~l~~----~~-~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~-g~~~~-----~~~~~Ris~~~- 396 (419)
.|.+ ++ ++. +..|.+|+|+|++++.. +..++. +++.++||.+.| |..|+ .++++||+++.
T Consensus 325 ~l~~~l~~~~~~~~-~~~p~~g~~~~~~~~~~------~~~~~~-~~l~~~gv~v~~~g~~~~~~~~~~~~~iRis~~~~ 396 (423)
T 3ez1_A 325 VLRAELGEGGEYAT-WTLPKGGYFISLDTAEP------VADRVV-KLAEAAGVSLTPAGATYPAGQDPHNRNLRLAPTRP 396 (423)
T ss_dssp HHHHHHTTTTSSEE-ECCCSBSSCEEEEESSS------CHHHHH-HHHHHTTEECCCTTTTSSTTCCSSSCEEEECCSSS
T ss_pred HHHHhcCcCCCceE-EeCCCccEEEEEECCCC------cHHHHH-HHHHHCCcEEecCcccccCCCCCCCCeEEEEcCCC
Confidence 7754 32 244 44788999999998742 344444 555788999999 66665 25899999974
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q 014769 397 EPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+++++++++++|++++++...
T Consensus 397 ~~~~i~~~~~~l~~~l~~~~~ 417 (423)
T 3ez1_A 397 PVEEVRTAMQVVAACIRLATE 417 (423)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999999987654
No 71
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=100.00 E-value=1.8e-47 Score=363.71 Aligned_cols=351 Identities=18% Similarity=0.265 Sum_probs=292.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
++|+|+.|+| .+++++.+.+++.+++... ...|++. ..++|+++++++.+.+|..+++++|++|+|+++++..
T Consensus 32 ~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~-~~~y~~~--~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~ 104 (392)
T 3b1d_A 32 QLLPAWIADM----DFEVMPEVKQAIHDYAEQL-VYGYTYA--SDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISI 104 (392)
Confidence 8999999986 3567889999998887653 3467764 7899999999998878877889999999999999999
Q ss_pred HHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCC-CCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHH
Q 014769 123 ILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPE-RNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 123 ~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~ 200 (419)
+++++.++||+|+++.|+|+++...+...|.+++.++++++ ++|.+|++.++++++ .+++++++++|+||||.+++.+
T Consensus 105 ~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~ 184 (392)
T 3b1d_A 105 AIQAFTKEGEAVLINSPVYPPFARSVRLNNRKLVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWERE 184 (392)
Confidence 99999999999999999999999988888999888887533 246789999999887 5678889999999999999999
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC--CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS--IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~--~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
++++|+++|+++|+++|+||+|..+.+++....++..+.. .++++++.|+||.++++|+|+||++++++ ++
T Consensus 185 ~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~-------~~ 257 (392)
T 3b1d_A 185 VLEQIGHLCQKHHVILVSDEIHQDLTLFGHEHVSFNTVSPDFKDFALVLSSATKTFNIAGTKNSYAIIENP-------TL 257 (392)
Confidence 9999999999999999999999999887655555555543 46789999999999889999999998652 36
Q ss_pred HHHHHhhhccc--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCceEEEEeecCcc
Q 014769 279 IDSIKDCLSIY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGSMVTMVKLNPW 355 (419)
Q Consensus 279 ~~~l~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g~~~~~~~~~~ 355 (419)
++.++...... .++++++|.++..+|+.. .+++++.+++++++++.+.+.|++ +|++. +..|.+++++|++++..
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~~~~i~~~~~ 335 (392)
T 3b1d_A 258 CAQFKHQQLVNNHHEVSSLGYIATETAYRYG-KPWLVALKAVLEENIQFAVEYFAQEAPRLK-VMKPQGTYLIWLDFSDY 335 (392)
Confidence 66666554322 356888888888888753 467888899999999999999988 78887 45788999999888642
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
. .+..++...|++++||.+.||..|+. ++++||+++.++++|++++++|+++++
T Consensus 336 ~----~~~~~l~~~l~~~~gi~v~~g~~f~~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 336 G----LTDDALFTLLHDQAKVILNRGSDYGSEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 1 13556777776678999999998873 579999998888999999999998875
No 72
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=100.00 E-value=4.1e-43 Score=335.64 Aligned_cols=369 Identities=15% Similarity=0.121 Sum_probs=271.9
Q ss_pred chhhhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH
Q 014769 14 KQEHKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI 93 (419)
Q Consensus 14 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i 93 (419)
.+++...+++.|..+++.+.+ ...+++|+|+.|+|. +++.++.+.+++.++. ......|.+..|..++|+++
T Consensus 17 ~~~~~~~~~~~i~~~~~~~~~----~~~~~~i~l~~g~~~---d~~~~~~v~~a~~~a~-~~~~~~y~~~~g~~~lr~~i 88 (409)
T 4eu1_A 17 QGPGSMGKPDPILGLGQDFRM----DPAKRKVNLSIGVYR---DDADQPFVLECVKQAT-LGTNMDYAPVTGIASFVEEA 88 (409)
T ss_dssp ----------CHHHHHHHHHH----CCCSSCEECCCSSCC---CTTSCCCCCHHHHTCC-CCSCCCCCCTTCCHHHHHHH
T ss_pred hhcCCCCCCChHHHHHHHHhh----CCCcCceeeeeeEEE---CCCCCEeecHHHHhcC-ccccccCCCCCCcHHHHHHH
Confidence 344556677777777765543 446789999999972 2333444556665553 23345898889999999999
Q ss_pred HHHHHhhCCCCCCCCcEE--EcccHHHHHHHHH---HHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCccc
Q 014769 94 ADYLSRDLPYKLSADDVY--VTLGCKQAVEVIL---SVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEV 168 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~--~t~g~~~al~~~~---~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (419)
++++....+..+++++|. .|.|+++++..+. .+++++||+|++++|+|..+...++..|.+++.+++..++++.+
T Consensus 89 a~~~~~~~~~~~~~~~i~~~~~~~g~ga~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~ 168 (409)
T 4eu1_A 89 QKLCFGPTCAALRDGRIASCQTLGGTGALRIGGDLLNRFVANCNRIYGPDVGYPNHESIFAKAGMELTPYSYYDPATKGL 168 (409)
T ss_dssp HHHHHCSSCHHHHTTCEEEEEESHHHHHHHHHHHHGGGTSSSCCEEEEESSCCTHHHHHHHHTTCEEEEECCEETTTTEE
T ss_pred HHHHcCCCchhhccCceeeeecccchHHHHHHHHHHHHhcCCCCEEEEeCCCcHhHHHHHHHcCCeEEEEEeecCcCCcC
Confidence 999853222222367884 5899999988764 44568999999999999999999999999999999865567889
Q ss_pred ChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC--CCCCcccc-CCCC
Q 014769 169 DLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI--PYTPMGLF-GSIV 242 (419)
Q Consensus 169 ~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~--~~~~~~~~-~~~~ 242 (419)
|++.++++++ ++++++++++|+||||.+++.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+ +..+
T Consensus 169 d~~~l~~~l~~~~~~~~~i~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~ 248 (409)
T 4eu1_A 169 NLAGMLECLDKAPEGSVILVHACAHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVP 248 (409)
T ss_dssp CHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSS
T ss_pred cHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCC
Confidence 9999999885 2445566799999999999999999999999999999999999999887652 11122222 3345
Q ss_pred cEEEEecCCCcCCCCCceeEEE--EeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHH
Q 014769 243 PVITLGSISKRWLVPGWRFGWL--VTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCK 314 (419)
Q Consensus 243 ~~i~~~s~sK~~~~~G~r~G~~--~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~ 314 (419)
++++++||||.++++|+|+||+ ++.+++ .. ..+++.++... ..+.+++.+.|.++..+++... .+++++
T Consensus 249 ~~i~~~S~SK~~g~~G~riG~~~~v~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 325 (409)
T 4eu1_A 249 NLIVAQSFSKNFGLYGHRCGALHISTASAE-EA--KRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQ 325 (409)
T ss_dssp CCEEEEECTTTSSCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_pred cEEEEecCcccccCccCCceEEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 7899999999999999999997 554411 00 01555555543 3345677889999988887632 245778
Q ss_pred HHHHHHHHHHHHHHHhhcCC--C-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769 315 LIDTLRESAEICYDGVKEIP--C-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLR 391 (419)
Q Consensus 315 ~~~~~~~~~~~l~~~l~~~~--~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R 391 (419)
.+++++++++.+.+.|++++ + +. +..|++|+|+|+.++ .+++.++++++||.+.||. |
T Consensus 326 ~~~~~~~~~~~l~~~L~~~g~~~~~~-~~~~~~~~~~~~~~~----------~~~~~~ll~~~gv~v~p~~--------R 386 (409)
T 4eu1_A 326 MSSRIAEVRKRLVSELKACGSVHDWS-HIERQVGMMAYTGLT----------REQVELLRSEYHIYMTLNG--------R 386 (409)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCSCCH-HHHHSCSSEEECCCC----------HHHHHHHHHHHCEECCTTC--------E
T ss_pred HHHHHHHHHHHHHHHHHhcCCCCCcc-eecCCceEEEEeCCC----------HHHHHHHHHcCCEEEcCCC--------E
Confidence 88999999999999998862 1 55 446889999997653 3557788888999999863 9
Q ss_pred EEee-cCHHHHHHHHHHHHHHH
Q 014769 392 IAFC-AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 392 is~~-~~~~~l~~~l~~l~~~~ 412 (419)
|+++ .++++++++++.|++++
T Consensus 387 i~~~~~~~~~i~~~~~~l~~~l 408 (409)
T 4eu1_A 387 AAVSGLNSTNVEYVSQAIHNVT 408 (409)
T ss_dssp EEGGGCCTTTHHHHHHHHHHHH
T ss_pred EEEEecCHhhHHHHHHHHHHHh
Confidence 9995 57788999999998875
No 73
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=100.00 E-value=1.9e-43 Score=336.60 Aligned_cols=369 Identities=18% Similarity=0.188 Sum_probs=272.9
Q ss_pred hhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCC-CCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHH
Q 014769 18 KAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPT-AFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADY 96 (419)
Q Consensus 18 ~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~-~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~ 96 (419)
...+++.+..+...+.. ..++++|||+.|.+. .....++++.+.+++.+.+.......|++..|..++|++++++
T Consensus 6 ~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~~ 81 (396)
T 2q7w_A 6 TAAPADPILGLADLFRA----DERPGKINLGIGVYKDETGKTPVLTSVKKAEQYLLENETTKNYLGIDGIPEFGRCTQEL 81 (396)
T ss_dssp CCCCC---------------------CEESSCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCTTCCHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHhc----cCCCCceecccccccCCCCCccCcHHHHHHHHhhcCcccccCCCCCCCCHHHHHHHHHH
Confidence 44555666666654332 236789999999842 1222466789999998887644455898889999999999999
Q ss_pred HHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHH
Q 014769 97 LSRDLPYKLSADDVYV--TLGCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 97 l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 172 (419)
+....+..+++++|++ |+|++++++.+++++. .+||+|++++|+|+++...++..|.+++.+++++++++.+|++.
T Consensus 82 ~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~ 161 (396)
T 2q7w_A 82 LFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHKSVFNSAGLEVREYAYYDAENHTLDFDA 161 (396)
T ss_dssp HHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHHHHHHHTTCEEEEEECEETTTTEECHHH
T ss_pred HhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHcCCceEEEecccCCCCCcCHHH
Confidence 9654333356889998 9999999999998764 59999999999999999999999999999988654567899999
Q ss_pred HHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCC-CCCCCccccCC-CCcEEEE
Q 014769 173 VEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGS-IPYTPMGLFGS-IVPVITL 247 (419)
Q Consensus 173 l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~-~~~~~~~~~~~-~~~~i~~ 247 (419)
+++++++ +++++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++ ....++..+.. .++++++
T Consensus 162 l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 241 (396)
T 2q7w_A 162 LINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGFARGLEEDAEGLRAFAAMHKELIVA 241 (396)
T ss_dssp HHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTSSSCHHHHTHHHHHHHHHCSCEEEE
T ss_pred HHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccccCCccchhHHHHHHHhcCCcEEEE
Confidence 9998864 35677889999999999999999999999999999999999999988753 11223332322 2468999
Q ss_pred ecCCCcCCCCCceeEEEEe--eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVT--NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDTL 319 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~~ 319 (419)
+|+||.++++|+|+||+++ ++++ .. .++++.+.... ..+.+++.++|.++.++|+... .+++++.++++
T Consensus 242 ~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~ 318 (396)
T 2q7w_A 242 SSYSXNFGLYNERVGACTLVAADSE-TV--DRAFSQMKAAIRANYSNPPAHGASVVATILSNDALRAIWEQELTDMRQRI 318 (396)
T ss_dssp EECTTTTTCGGGCCEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHC-CHH
T ss_pred EeccccccccccccceEEEEcCCHH-HH--HHHHHHHHHHHhhccCCCCcHHHHHHHHHhcChhhHHHHHHHHHHHHHHH
Confidence 9999999889999999986 3311 00 02445554432 2334568889999988887631 25677888999
Q ss_pred HHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeec
Q 014769 320 RESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCA 396 (419)
Q Consensus 320 ~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~ 396 (419)
+++++.+.+.|+++. ++. +..|.+|+|+|+.++ . +++..+++++||.+.|| +||+++.
T Consensus 319 ~~~~~~l~~~L~~~~~~~~~~-~~~~~~~~~~~~~~~---------~-~~~~~~l~~~gv~v~~~--------~Ris~~~ 379 (396)
T 2q7w_A 319 QRMRQLFVNTLQEKGANRDFS-FIIKQNGMFSFSGLT---------K-EQVLRLREEFGVYAVAS--------GRVNVAG 379 (396)
T ss_dssp HHHHHHHHHHHHHTTCCSCCT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGGG
T ss_pred HHHHHHHHHHHHhcCCCCCcc-eecCCCceEEEecCC---------H-HHHHHHHHhcCeeecCC--------ceEEEee
Confidence 999999999999873 366 446888999998663 2 34567778899999885 5999974
Q ss_pred -CHHHHHHHHHHHHHHH
Q 014769 397 -EPSALKDGLGRMKAFC 412 (419)
Q Consensus 397 -~~~~l~~~l~~l~~~~ 412 (419)
+++++++++++|++++
T Consensus 380 ~~~e~i~~~~~~l~~~l 396 (396)
T 2q7w_A 380 MTPDNMAPLCEAIVAVL 396 (396)
T ss_dssp CCTTTHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHhcC
Confidence 8899999999998753
No 74
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=100.00 E-value=1.3e-42 Score=330.48 Aligned_cols=366 Identities=16% Similarity=0.153 Sum_probs=280.8
Q ss_pred hhhCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCC-CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHH
Q 014769 17 HKAAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTA-FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIAD 95 (419)
Q Consensus 17 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~-~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~ 95 (419)
....+++.++.+.....+ ..++++|||+.|.|.. .+..++++.+.+++.+.+.......|++..|..++|+++++
T Consensus 5 ~~~~~~~~~~~~~~~~~~----~~~~~~i~l~~g~~~~~~~~~~~~~~v~~a~~~~~~~~~~~~y~~~~g~~~lr~~la~ 80 (394)
T 2ay1_A 5 LKPQAPDKILALMGEFRA----DPRQGKIDLGVGVYKDATGHTPIMRAVHAAEQRMLETETTKTYAGLSGEPEFQKAMGE 80 (394)
T ss_dssp CCCCCCCSHHHHHHHHHH----CCCTTCEECCCCSCCCTTSCCCCCHHHHHHHHHHHHHCCCCCCCCSSCCHHHHHHHHH
T ss_pred CccCCCccHHHHHHHHHh----CCCccccccccceeeCCCCCccCcHHHHHHHHHhcCCcccCCCCCCCCcHHHHHHHHH
Confidence 455677778777765543 2367899999998631 12246679999999888764445689888899999999999
Q ss_pred HHHhhCCCCCCCCcEEE--cccHHHHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChH
Q 014769 96 YLSRDLPYKLSADDVYV--TLGCKQAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLD 171 (419)
Q Consensus 96 ~l~~~~~~~~~~~~i~~--t~g~~~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 171 (419)
++... ++++++|++ |+|++++++.++.++.. +||+|++++|+|+++...++..|.+++.+++++++++.+|++
T Consensus 81 ~~~~~---~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~ 157 (394)
T 2ay1_A 81 LILGD---GLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHVSIMNFMGLPVQTYRYFDAETRGVDFE 157 (394)
T ss_dssp HHHGG---GCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHHHHHHHHTCCEEEEECEETTTTEECHH
T ss_pred HHhCC---CCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHHHHHHHcCCceEEEecccccCCccCHH
Confidence 98432 236789999 99999999999988765 999999999999999999999999999998865456789999
Q ss_pred HHHHhhcCC---ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCC-CCCCccccCC-CCcEEE
Q 014769 172 AVEALADKN---TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSI-PYTPMGLFGS-IVPVIT 246 (419)
Q Consensus 172 ~l~~~~~~~---~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~-~~~~~~~~~~-~~~~i~ 246 (419)
.+++++++. +.++++++|+||||.++|.+++++|+++|+++|+++|+||+|+.+.+++. ...++..+.. .+++++
T Consensus 158 ~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (394)
T 2ay1_A 158 GMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDGLEEDAAGTRLIASRIPEVLI 237 (394)
T ss_dssp HHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSCHHHHHHHHHHHHHHCSSEEE
T ss_pred HHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccCcccchHHHHHHhhcCCCEEE
Confidence 999988653 45667799999999999999999999999999999999999999877531 1112222211 246899
Q ss_pred EecCCCcCCCCCceeEEEEe--eCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-----hHHHHHHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLVT--NDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-----EDFFCKLIDT 318 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~~--~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-----~~~~~~~~~~ 318 (419)
++|+||.++++|+|+||+++ ++++ +. ..+.+.+.... ..+.++++++|.++.++|+... .+++++.+++
T Consensus 238 ~~s~sK~~~~~G~riG~~~~~~~~~~-~~--~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~ 314 (394)
T 2ay1_A 238 AASCSKNFGIYRERTGCLLALCADAA-TR--ELAQGAMAFLNRQTYSFPPFHGAKIVSTVLTTPELRADWMAELEAVRSG 314 (394)
T ss_dssp EEECTTTTTCGGGCEEEEEEECSSHH-HH--HHHHHHHHHHHHTTTSSCCCHHHHHHHHHHHSHHHHHHHHHHHHHHHHH
T ss_pred EEeccCCCcCcCCccceEEEEeCCHH-HH--HHHHHHHHHHHhhhcCCCChHHHHHHHHHhcChHHHHHHHHHHHHHHHH
Confidence 99999999889999999997 3311 00 01233333222 2234558889998888887631 2578888899
Q ss_pred HHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee
Q 014769 319 LRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC 395 (419)
Q Consensus 319 ~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~ 395 (419)
++++++.+.+.|+++. ++. +..|.+|+|+|+.++ . +.+..+++++||.+.|| +|++++
T Consensus 315 ~~~~~~~l~~~L~~~~~~~~~~-~~~~~~g~~~~~~~~---------~-~~~~~~l~~~gi~v~~~--------~Ris~~ 375 (394)
T 2ay1_A 315 MLRLREQLAGELRDLSGSDRFG-FVAEHRGMFSRLGAT---------P-EQVKRIKEEFGIYMVGD--------SRINIA 375 (394)
T ss_dssp HHHHHHHHHHHHHHHHTSSTTT-HHHHCCSSEEECCCC---------H-HHHHHHHHHHCEECCTT--------CEEEGG
T ss_pred HHHHHHHHHHHHHhcCCCCCee-EEcCCceEEEeeCCC---------H-HHHHHHHHhCCEEecCC--------CeEEee
Confidence 9999999999998762 366 446788999998764 2 34566778899999885 499996
Q ss_pred -cCHHHHHHHHHHHHHH
Q 014769 396 -AEPSALKDGLGRMKAF 411 (419)
Q Consensus 396 -~~~~~l~~~l~~l~~~ 411 (419)
.+++++++++++|+++
T Consensus 376 ~~~~~~i~~~~~~l~~~ 392 (394)
T 2ay1_A 376 GLNDNTIPILARAIIEV 392 (394)
T ss_dssp GCCTTTHHHHHHHHHHH
T ss_pred cCCHhhHHHHHHHHHHc
Confidence 4889999999999875
No 75
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=100.00 E-value=7.7e-41 Score=315.48 Aligned_cols=332 Identities=16% Similarity=0.229 Sum_probs=271.0
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
.|||+.|.+ .++.++.+.+++.+.+... ....|++..+ .++|+++++++.+.+|.++++++|++|+|+++++.
T Consensus 32 ~idl~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~~~-~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~ 106 (369)
T 3cq5_A 32 DIRLNTNEN----PYPPSEALVADLVATVDKIATELNRYPERDA-VELRDELAAYITKQTGVAVTRDNLWAANGSNEILQ 106 (369)
T ss_dssp SEECSSCCC----CSCCCHHHHHHHHHHHHHHGGGTTSCCCTTC-HHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHH
T ss_pred ceeccCCCC----CCCCCHHHHHHHHHHHHhcccccccCCCccH-HHHHHHHHHhhhhcccCCCChHhEEECCChHHHHH
Confidence 499999985 2567899999999887542 2357877655 89999999999988888888999999999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHH
Q 014769 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~ 200 (419)
.++.+++++||+|++++|+|+++...++..|.+++.++.+ .++.+|++.+++++++ ++++|++++|+||||.++|.+
T Consensus 107 ~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~ 184 (369)
T 3cq5_A 107 QLLQAFGGPGRTALGFQPSYSMHPILAKGTHTEFIAVSRG--ADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLD 184 (369)
T ss_dssp HHHHHHCSTTCEEEEEESSCTHHHHHHHHTTCEEEEEECC--TTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHH
T ss_pred HHHHHhcCCCCEEEEcCCChHHHHHHHHHcCCEEEEecCC--cCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHH
Confidence 9999999999999999999999999999999999998864 4567999999999877 789999999999999999966
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCC-cEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV-PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~-~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
++.+|++ .+++++|+||+|+.+.++ . ..+...+..+ +++++.|+||.++++|+|+||+++++ +++
T Consensus 185 ~l~~l~~---~~~~~li~De~~~~~~~~-~--~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~--------~~~ 250 (369)
T 3cq5_A 185 DVERIIN---VAPGIVIVDEAYAEFSPS-P--SATTLLEKYPTKLVVSRTMSKAFDFAGGRLGYFVANP--------AFI 250 (369)
T ss_dssp HHHHHHH---HCSSEEEEECTTGGGCCS-C--CGGGGTTTCTTTEEEEEESSSTTSCGGGCCEEEEECT--------HHH
T ss_pred HHHHHHH---hCCCEEEEECCchhhcCC-c--chHHHHhhCCCCEEEEEechHhcCCcccceEEEEeCH--------HHH
Confidence 5555555 556999999999987653 1 1122223344 78999999999988999999999975 577
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.+..... .++++.+.+.++.++++. .+++++.+++++++++.+.+.|++. ++. +. +..|.|+|++++.
T Consensus 251 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~~~~~~~~~~~----- 319 (369)
T 3cq5_A 251 DAVMLVRL-PYHLSALSQAAAIVALRH--SADTLGTVEKLSVERVRVAARLEEL-GYA-VV-PSESNFVFFGDFS----- 319 (369)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHHHHT--HHHHHTHHHHHHHHHHHHHHHHHHH-TCE-EE-CCSSSEEEEECCS-----
T ss_pred HHHHHcCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHhC-CCE-EC-CCCCeEEEEECCC-----
Confidence 77776544 356888999999888876 4678888899999999999999875 776 42 5567788988761
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+..++...| .++||.+.|| +.++++|++++ ++++++++++.|+++++.
T Consensus 320 --~~~~l~~~l-~~~gi~v~~~---~~~~~iRis~~-~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 320 --DQHAAWQAF-LDRGVLIRDV---GIAGHLRTTIG-VPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp --SHHHHHHHH-HHTTEECBCC---SCTTEEEEECC-CHHHHHHHHHHHHHHHTT
T ss_pred --CHHHHHHHH-HHCCEEEEEC---CCCCeEEEEeC-CHHHHHHHHHHHHHHHhc
Confidence 466777776 6789999998 34689999998 688999999999988643
No 76
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=100.00 E-value=8.1e-42 Score=319.85 Aligned_cols=327 Identities=16% Similarity=0.198 Sum_probs=261.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.++++|||+.|.+. +++++.+.+++.+.+. ....|+++.+ .++|+++++++ ++++++|++|+|++++
T Consensus 13 ~g~~~id~~~~~~~----~~~~~~v~~a~~~~~~--~~~~y~~~~~-~~lr~~la~~~------~~~~~~i~~t~g~~~a 79 (350)
T 3fkd_A 13 LSSEIVNFSTTVWT----DGDKDHLEKHLVENLN--CIRHYPEPDA-GTLRQMLAKRN------SVDNNAILVTNGPTAA 79 (350)
T ss_dssp ---CCEECSCCSCC----CSCCHHHHHHHHHTGG--GGGSCCCTTC-HHHHHHHHHHT------TCCGGGEEEESHHHHH
T ss_pred ccccEEEccCCCCC----CCCCHHHHHHHHHhHh--HHhcCCCCcH-HHHHHHHHHHh------CcCHHHEEEcCCHHHH
Confidence 36899999999753 5678999999988873 2457888766 89999999998 5788999999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec-cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL-LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
+..+++++. ||+|+++.|+|..+...++..|.+++.+++ ++.++ +++ ++++++++++|+||||.++|
T Consensus 80 l~~~~~~l~--gd~Vi~~~p~~~~~~~~~~~~g~~~~~v~~~~~~~~--~~~--------~~~~~v~i~~p~nptG~~~~ 147 (350)
T 3fkd_A 80 FYQIAQAFR--GSRSLIAIPSFAEYEDACRMYEHEVCFYPSNEDIGE--ADF--------SNMDFCWLCNPNNPDGRLLQ 147 (350)
T ss_dssp HHHHHHHTT--TCEEEEEESCCHHHHHHHHHTTCEEEEEETTSCGGG--SCC--------TTCSEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHC--CCEEEEeCCCcHHHHHHHHHcCCeEEEEecCCcccc--Ccc--------CCCCEEEEeCCCCCcCCCCC
Confidence 999999998 999999999999999999999999999987 43333 333 47899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
.+++.+|++.|+++ ++|+||+|..+.+++... ...++..+++++++|+||.++++|+|+||++++. ++
T Consensus 148 ~~~l~~l~~~~~~~--~li~Dea~~~~~~~~~~~--~~~~~~~~~~i~~~S~sK~~~~~G~r~G~~~~~~--------~~ 215 (350)
T 3fkd_A 148 RTEILRLLNDHPDT--TFVLDQSYVSFTTEEVIR--PADIKGRKNLVMVYSFSHAYGIPGLRIGYIVANK--------DF 215 (350)
T ss_dssp HHHHHHHHHHCTTS--EEEEECTTTTSCSSCCCC--GGGGTTCSSEEEEEESHHHHSCGGGCCEEEECCH--------HH
T ss_pred HHHHHHHHHhCCCC--EEEEECchhhhccCcchh--hHHhhcCCCEEEEecCchhccCcchheEeEEeCH--------HH
Confidence 99999999888765 999999999987765432 2344455678999999999989999999999854 68
Q ss_pred HHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc
Q 014769 279 IDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE 358 (419)
Q Consensus 279 ~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~ 358 (419)
++.++.... .++++.+.+.++..+|+... .+.++..+.. ++++.+.+.|+++|++. + .|..+.|+|+.++..
T Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~-~~~~~l~~~L~~~~~~~-~-~~~~~~~~~~~~~~~--- 287 (350)
T 3fkd_A 216 MKRVAAFST-PWAVNALAIEAAKFILIHPA-QFTLPIRKWQ-RNTVDFITALNRLDGVE-V-HPSGTTFFLLRLKKG--- 287 (350)
T ss_dssp HHHHHTTCC-TTCSCHHHHHHHHHHHHCTT-TTCCCHHHHH-HHHHHHHHHHHHSTTEE-E-CCCSSSEEEEEESSS---
T ss_pred HHHHHHhCC-CCCCCHHHHHHHHHHHhCHH-HHHHHHHHHH-HHHHHHHHHHhcCCCcE-E-CCCCCcEEEEECCCC---
Confidence 888877654 46788999999999888632 2333333333 88888999998888887 4 455677888888742
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+..++...|++++||.+.||..|+. ++++||+++ ++++++++++.|+++.+++
T Consensus 288 ---~~~~l~~~L~~~~gi~v~~g~~f~~~~~~~iRis~~-~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 288 ---TAAELKKYMLEEYNMLIRDASNFRGLDESYVRITTQ-RPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp ---CHHHHHHHHHHTTCEECEECTTSTTCCTTEEEEECC-CHHHHHHHHHHHHHHHTC-
T ss_pred ---CHHHHHHHHHHHCCEEEEeCccCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHHHHh
Confidence 5678888886658999999998875 689999998 5677788888888877654
No 77
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=100.00 E-value=6.2e-41 Score=315.06 Aligned_cols=331 Identities=18% Similarity=0.275 Sum_probs=267.3
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+++++|+|+.|.+ .+++++.+.+++.+.+... ....|+++ +..++|+++++++ ++++++|++|+|++
T Consensus 24 ~~~~~i~l~~~~~----~~~~~~~v~~a~~~~~~~~~~~~~~y~~~-~~~~lr~~la~~~------g~~~~~i~~t~g~~ 92 (360)
T 3hdo_A 24 DIASWIKLNTNEN----PYPPSPEVVKAILEELGPDGAALRIYPSA-SSQKLREVAGELY------GFDPSWIIMANGSD 92 (360)
T ss_dssp CCTTSEECSSCCC----SSCCCHHHHHHHHHHHTTTCGGGGSCCCS-SCHHHHHHHHHHH------TCCGGGEEEESSHH
T ss_pred cccceeeccCCCC----CCCCCHHHHHHHHHHHhcccchhhcCCCC-chHHHHHHHHHHh------CcCcceEEEcCCHH
Confidence 3678999999985 3678899999999988764 14478764 6799999999999 57789999999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCC
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~ 197 (419)
++++.++.+++++||+|+++.|+|.++...++..|.+++.++++. ++.+ +++.+.+ +++++++++|+||||.++
T Consensus 93 ~al~~~~~~l~~~gd~Vl~~~p~~~~~~~~~~~~g~~~~~v~~~~--~~~~--~~l~~~~--~~~~v~i~~p~nptG~~~ 166 (360)
T 3hdo_A 93 EVLNNLIRAFAAEGEEIGYVHPSYSYYGTLAEVQGARVRTFGLTG--DFRI--AGFPERY--EGKVFFLTTPNAPLGPSF 166 (360)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSSCTHHHHHHHHHTCEEEEECBCT--TSSB--TTCCSSB--CSSEEEEESSCTTTCCCC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCChHHHHHHHHHCCCEEEEeeCCC--CCCH--HHHHhhc--CCCEEEEeCCCCCCCCCc
Confidence 999999999999999999999999999999999999999998753 3334 4444433 356899999999999999
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
| ++++.++|+++|+++|+||+|+.+. +..... ..+..++++++.|+||.++++|+|+||++++. +
T Consensus 167 ~---~~~l~~l~~~~~~~li~De~~~~~~--~~~~~~--~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~ 231 (360)
T 3hdo_A 167 P---LEYIDELARRCAGMLVLDETYAEFA--ESNALE--LVRRHENVVVTRTLSKSYSLAGMRIGLAIARP--------E 231 (360)
T ss_dssp C---HHHHHHHHHHBSSEEEEECTTGGGS--SCCCTH--HHHHCSSEEEEEESTTTTSCTTSCCEEEECCH--------H
T ss_pred C---HHHHHHHHHHCCCEEEEECChHhhC--CcchhH--HhccCCCEEEEecchHhhcCCccceeeEeeCH--------H
Confidence 9 5566677789999999999999863 322222 22334578999999999999999999999854 6
Q ss_pred HHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccc
Q 014769 278 IIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLL 357 (419)
Q Consensus 278 ~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~ 357 (419)
+++.+..... .++++.+.+.++..+++. .+++++.+++++++++.+.+.|+++ ++. + .+..|.|+|+.++.
T Consensus 232 ~~~~~~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-~~~-~-~~~~~~~~~~~~~~--- 302 (360)
T 3hdo_A 232 VIAALDKIRD-HYNLDRLAQAACVAALRD--QAYLSECCRRIRETREWFTTELRSI-GYD-V-IPSQGNYLFATPPD--- 302 (360)
T ss_dssp HHHHHHHHSC-SCCSCHHHHHHHHHHHHC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-CCCSSSEEEEECTT---
T ss_pred HHHHHHHhCC-CCCCCHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHHHHHC-CCE-E-cCCCccEEEEECCC---
Confidence 7888876654 367899999999999986 5778899999999999999999988 776 4 45567788887763
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.+..++...| .++||.+.|+..++.++++|++++ ++++++++++.|+++-+.+-
T Consensus 303 ---~~~~~l~~~l-~~~gi~v~~~~~~~~~~~iRis~~-~~~e~~~l~~al~~~~~~~~ 356 (360)
T 3hdo_A 303 ---RDGKRVYDGL-YARKVLVRHFSDPLLAHGMRISIG-TREEMEQTLAALKEIGEGHH 356 (360)
T ss_dssp ---CCHHHHHHHH-HHTTEECBCCCSTTTTTSEEEECC-CHHHHHHHHHHHHHHHC---
T ss_pred ---CCHHHHHHHH-HHCCEEEEECCCCCCCCEEEEEcC-CHHHHHHHHHHHHHHhcccc
Confidence 2566777666 668999999887666799999998 68899999999988776543
No 78
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=100.00 E-value=2.1e-40 Score=308.63 Aligned_cols=322 Identities=16% Similarity=0.217 Sum_probs=258.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
..+++|+|+.+.+ .++++|.+.+++.+.+.. ...|++ .|..++|+++++++ ++++++|++|+|++++
T Consensus 14 ~~~~~i~l~~n~~----~~~~~~~v~~a~~~~~~~--~~~y~~-~~~~~lr~~la~~~------~~~~~~i~~t~G~~~~ 80 (337)
T 3p1t_A 14 AAAQAVCLAFNEN----PEAVEPRVQAAIAAAAAR--INRYPF-DAEPRVMRKLAEHF------SCPEDNLMLVRGIDEC 80 (337)
T ss_dssp CCCCCEECSSCCC----CSCCCHHHHHHHHHHGGG--TTSCCT-THHHHHHHHHHHHH------TSCGGGEEEESHHHHH
T ss_pred CCCCceEeeCCCC----CCCCCHHHHHHHHHhhhh--hccCCC-CchHHHHHHHHHHh------CcCHHHEEEeCCHHHH
Confidence 4678999999963 256789999999988764 457854 68999999999998 6788899999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+..++..+ +||+|++++|+|.++...++..|.+++.++++ .++.+|++.++++ .+++++++++|+||||.++|.
T Consensus 81 l~~~~~~~--~gd~vl~~~p~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~ 154 (337)
T 3p1t_A 81 FDRISAEF--SSMRFVTAWPGFDGYRARIAVSGLRHFEIGLT--DDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSA 154 (337)
T ss_dssp HHHHHHHS--TTSEEEEESSSCSHHHHHHTTSCCEEEEECBC--TTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHhc--CCCeEEEeCCCcHHHHHHHHHcCCEEEEecCC--CCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCH
Confidence 99999998 89999999999999999999999999998875 3568999999876 367899999999999999995
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
++ +.++|+++++ +|+||+|+.+.+.+.. . ....+++++++|+||.++++|+|+||++++. +++
T Consensus 155 ~~---l~~l~~~~~~-~ivDea~~~~~~~~~~--~---~~~~~~~i~~~S~sK~~g~~G~r~G~~~~~~--------~~~ 217 (337)
T 3p1t_A 155 GE---LDQLRQRAGK-LLIDETYVDYSSFRAR--G---LAYGENELVFRSFSKSYGLAGLRLGALFGPS--------ELI 217 (337)
T ss_dssp HH---HHHHHHHCSE-EEEECTTGGGSSCSSS--C---CCCBTTEEEEEESSSTTCCTTTCCEEEECCH--------HHH
T ss_pred HH---HHHHHHhCCc-EEEECCChhhcccccc--c---cccCCCEEEEeeCchhccCcchheEEEEeCH--------HHH
Confidence 54 5555667776 6669999986644321 1 2234568999999999989999999999865 677
Q ss_pred HHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC
Q 014769 280 DSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED 359 (419)
Q Consensus 280 ~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~ 359 (419)
+.++.... .++++.+.+.++..+++. .+++.+..+++.++++.+.+.|+++ ++. +..+.+ .|+|+..+
T Consensus 218 ~~l~~~~~-~~~~~~~~~~a~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~-~~~~~~~~------ 285 (337)
T 3p1t_A 218 AAMKRKQW-FCNVGTLDLHALEAALDN--DRAREAHIAKTLAQRRRVADALRGL-GYR-VASSEA-NFVLVENA------ 285 (337)
T ss_dssp HHHHTTSC-TTCSCHHHHHHHHHHHTC--HHHHHHHHHHHHHHHHHHHHHHHHT-TCC-BCCCSS-SEEEEECT------
T ss_pred HHHHhhcC-CCCCCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-cCE-ECCCCC-eEEEEEcC------
Confidence 77776543 467788899999888876 3456677778888899999999988 777 435554 46666664
Q ss_pred CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 360 INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 360 ~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
+..++. +++.++||.+.||..|+.++++|++++ ++++++++++.|+++.+
T Consensus 286 --~~~~~~-~~l~~~gi~v~~g~~~~~~~~iRis~~-~~~~~~~l~~al~~~~~ 335 (337)
T 3p1t_A 286 --AGERTL-RFLRERGIQVKDAGQFGLHHHIRISIG-REEDNDRLLAALAEYSD 335 (337)
T ss_dssp --TTHHHH-HHHHHTTEECEEGGGGTCCSEEEEECC-CHHHHHHHHHHHHHHTC
T ss_pred --CHHHHH-HHHHHCCeEEEECccCCCCCeEEEecC-CHHHHHHHHHHHHHHhh
Confidence 234444 445778999999999988899999998 57888988888887653
No 79
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=100.00 E-value=1.2e-42 Score=329.83 Aligned_cols=331 Identities=18% Similarity=0.190 Sum_probs=255.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHH--hC-CCCCCCCCCCCC-----HHHHHHHHHHHHhhCCCCCCC-CcE
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAV--RS-GKFNCYATNSGI-----PPARRAIADYLSRDLPYKLSA-DDV 110 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~--~~-~~~~~Y~~~~g~-----~~lr~~ia~~l~~~~~~~~~~-~~i 110 (419)
.++++|+|+.|.|. ++.++.+.+++.+.. .. .....|+++.|. ++||++|++++. .+|..+.+ ++|
T Consensus 20 ~~~~~i~l~~g~p~----~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i 94 (391)
T 3bwn_A 20 MSDFVVNLDHGDPT----AYEEYWRKMGDRCTVTIRGCDLMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYI 94 (391)
T ss_dssp TTTSCEECSSCCCG----GGHHHHHHTGGGSCEEECTTTTCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEE
T ss_pred CCCCeeEcCCCCCC----CCCCHHHHHhHHHHhhcCccchhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeE
Confidence 47789999999864 455566666553322 11 134589999998 999999999997 46777777 599
Q ss_pred EEcccHHHHHHHHHHHhcCCCC----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEE
Q 014769 111 YVTLGCKQAVEVILSVLARPGA----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (419)
Q Consensus 111 ~~t~g~~~al~~~~~~l~~~gd----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 186 (419)
++|+|+++++..++++++++|| +|++++|+|..+...++..|.+++.++++.+ + +. .++++++++
T Consensus 95 ~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~~~~~~~g~~~~~~~~d~~-~--l~--------~~~~k~v~l 163 (391)
T 3bwn_A 95 VVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYVEETTYVRSGMYKWEGDAW-G--FD--------KKGPYIELV 163 (391)
T ss_dssp EEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHHHHHHTTCBTTEEEEEEST-T--CC--------CCSCEEEEE
T ss_pred EEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHHHHHHHcCCeEEEecCCHH-H--cC--------CCCCEEEEE
Confidence 9999999999999999999999 9999999999999999999999888887542 1 22 246889999
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
++||||||.+++ +|++.+..+++++|+||+|.. + ...++.. ..+++++++||||.|+++|+|+||+++
T Consensus 164 ~~p~NPtG~~~~-----~l~~~~~~~~~~ii~De~y~~----~-~~~~l~~--~~~~~i~~~S~SK~~g~~GlRiG~~~~ 231 (391)
T 3bwn_A 164 TSPNNPDGTIRE-----TVVNRPDDDEAKVIHDFAYYW----P-HYTPITR--RQDHDIMLFTFSKITGHAGSRIGWALV 231 (391)
T ss_dssp ESSCTTTCCCCC-----CCC-----CCCEEEEECTTCS----T-TTSCCCC--CBCCSEEEEEHHHHHSCGGGCEEEEEE
T ss_pred CCCCCCCchhHH-----HHHHHhhcCCCEEEEeCCCCC----C-CCCcccc--CCCCeEEEEechhhcCCCccceEEEEe
Confidence 999999999996 344422223399999999973 2 2223322 345789999999999999999999997
Q ss_pred eCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccc---------hHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769 267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTK---------EDFFCKLIDTLRESAEICYDGVKEIPCI 336 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~---------~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 336 (419)
.+ +++++.+..... ..++++.+.|.++..+|+... .+++++.++.++++++.+.+.|++++++
T Consensus 232 ~~-------~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~ 304 (391)
T 3bwn_A 232 KD-------KEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKYGREMMKNRWEKLREVVKESDAF 304 (391)
T ss_dssp CC-------HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHHHHHHHHHHHHHHHHHHHTCSSE
T ss_pred cC-------HHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHHHHHHHHHHHHHHHHHHHhCCCc
Confidence 32 157777777653 346789999999999997642 4678899999999999999999988666
Q ss_pred CCCCC-------------CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHHHH
Q 014769 337 SCPNK-------------PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSALK 402 (419)
Q Consensus 337 ~~~~~-------------p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~l~ 402 (419)
.+. . |.+|+|+|++++. . +++..+++++||.+.||+.|+. ++++|||++.++++++
T Consensus 305 ~~~-~p~~~~~~f~~~~~~~~g~~~~~~~~~--------~-~~~~~~l~~~gV~v~pg~~fg~~~~~iRis~~~~~e~i~ 374 (391)
T 3bwn_A 305 TLP-KYPEAFCNYFGKSLESYPAFAWLGTKE--------E-TDLVSELRRHKVMSRAGERCGSDKKHVRVSMLSREDVFN 374 (391)
T ss_dssp ECC-CCCCEEETTTTEEECCCCSEEEEEESS--------S-CCHHHHHHHTTEECEEGGGGTCCTTEEEEESCSCHHHHH
T ss_pred ccc-cCCccccccccccCCCcceEEEecCCc--------H-HHHHHHHHHCCEEEccCCCCCCCCCEEEEEecCCHHHHH
Confidence 522 3 3456689998863 1 2345666889999999999986 7899999988899999
Q ss_pred HHHHHHHHHHHHH
Q 014769 403 DGLGRMKAFCQRH 415 (419)
Q Consensus 403 ~~l~~l~~~~~~~ 415 (419)
+++++|++++++.
T Consensus 375 ~~~~~L~~~~~~~ 387 (391)
T 3bwn_A 375 VFLERLANMKLIK 387 (391)
T ss_dssp HHHHHHHSCC---
T ss_pred HHHHHHHHHHHhh
Confidence 9999999887653
No 80
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=100.00 E-value=7.3e-42 Score=327.59 Aligned_cols=331 Identities=15% Similarity=0.128 Sum_probs=265.4
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHh-CCC-CCCCCCCC-C---CHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVR-SGK-FNCYATNS-G---IPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~-~~~-~~~Y~~~~-g---~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+..+|+|+.|+|. ++.++.+.+++.+.+. .+. ...|+++. | ..+||++|++|+.+..+..+++++|++|+
T Consensus 55 ~~~~i~l~~g~~~----~~~~~~v~~a~~~~l~~~~~~~~~Y~~~~~G~~~~~~lr~aia~~~~~~~~~~~~~~~iv~t~ 130 (427)
T 2hox_A 55 QGCSADVASGDGL----FLEEYWKQHKEASAVLVSPWHRMSYFFNPVSNFISFELEKTIKELHEVVGNAAAKDRYIVFGV 130 (427)
T ss_dssp TTCCEECCSCCCG----GGHHHHTTSHHHHCEEECTTTTCSSSCSSCCTTCCHHHHHHHHHHHHHHTCBCCTTCEEEEES
T ss_pred CCceEEecCcCCC----CCCCHHHHHhHHhhhhcCCcccccCCCCCCCccchHHHHHHHHHHHHHhCCcCCCCCEEEEeC
Confidence 4568999999863 5667788888887763 222 22499888 9 99999999999988777668899999999
Q ss_pred cHHHHHHHHHHHh--------cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEE
Q 014769 115 GCKQAVEVILSVL--------ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (419)
Q Consensus 115 g~~~al~~~~~~l--------~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 186 (419)
|+++++..++.++ +++||.|+++.|+|..+...++..|.+++. +.+|++.|+++++++++++++
T Consensus 131 G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~~~~~g~~~~~--------~~~d~~~l~~~~~~~~k~v~l 202 (427)
T 2hox_A 131 GVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQTKYFDKKGYV--------WAGNAANYVNVSNPEQYIEMV 202 (427)
T ss_dssp HHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHHHHHSCBTTEE--------EEEEGGGGTTCSCGGGEEEEE
T ss_pred CHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHHHHHcCCeeee--------ecCCHHHHHHhhcCCceEEEE
Confidence 9999999999999 899999999999999999999999987653 346778888888777899999
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
++|+||||.+++ +.+ + ++..+.|++|. + +..++..+. .+++++++||||.++++|+|+||+++
T Consensus 203 ~~p~NPtG~~~~-~~l-------~--~~~~i~d~~~~----~--~~~s~~~~~-~~~~i~~~S~SK~~g~~G~RiG~~~~ 265 (427)
T 2hox_A 203 TSPNNPEGLLRH-AVI-------K--GCKSIYDMVYY----W--PHYTPIKYK-ADEDILLFTMSKFTGHSGSRFGWALI 265 (427)
T ss_dssp ESSCTTTCCCCC-CSS-------T--TCEEEEECTTC----S--TTTSCCCSC-BCCSEEEEEHHHHTSCGGGCCEEEEE
T ss_pred cCCCCCcccccH-HHH-------c--CCCEEEeeccc----C--CCCCccccC-CCceEEEEeChhcCCCCCceEEEEEE
Confidence 999999999999 422 2 55677777664 2 122333333 45789999999999999999999999
Q ss_pred eCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHccc----------chHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 267 NDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKT----------KEDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~----------~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+++ ++++.++.... ...+++.+.|.++..+|+.. ..+++++.+++++++++.+.+.|+++++
T Consensus 266 ~~~-------~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g 338 (427)
T 2hox_A 266 KDE-------SVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITALLDQSDR 338 (427)
T ss_dssp CCH-------HHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHHHHTTSSS
T ss_pred CCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHhCcC
Confidence 532 57888877654 34678899999988888753 1356778889999999999999998766
Q ss_pred CCC-------------CCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEeecCHHHH
Q 014769 336 ISC-------------PNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFCAEPSAL 401 (419)
Q Consensus 336 ~~~-------------~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~~~~~~l 401 (419)
+.+ +..|.+|+|+|++++. +..+++..+++++||.+.||..|+. ++++|||++.++++|
T Consensus 339 ~~~~~~~~~~~~~~~~~~~p~~g~f~~~~~~~-------~~~~~~~~ll~~~gI~v~pg~~f~~~~~~~Ris~~~~~e~l 411 (427)
T 2hox_A 339 FSYQELPQSEYCNYFRRMRPPSPSYAWVKCEW-------EEDKDCYQTFQNGRINTQNGVGFEASSRYVRLSLIKTQDDF 411 (427)
T ss_dssp EECCCCCSCEEETTTTEEECCCCSEEEEEECS-------GGGCSHHHHHHHTTEECEEGGGGTSCTTEEEEECSSCHHHH
T ss_pred ccccccccccccccccccCCCCceEEEEECCC-------cHHHHHHHHHHHCCEEEcCCCccCCCCCEEEEEecCCHHHH
Confidence 552 1246679999999873 2455677887889999999999986 789999998899999
Q ss_pred HHHHHHHHHHHHH
Q 014769 402 KDGLGRMKAFCQR 414 (419)
Q Consensus 402 ~~~l~~l~~~~~~ 414 (419)
++++++|++++++
T Consensus 412 ~~~l~~l~~~~~~ 424 (427)
T 2hox_A 412 DQLMYYLKDMVKA 424 (427)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999998754
No 81
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=100.00 E-value=1.4e-39 Score=302.65 Aligned_cols=316 Identities=19% Similarity=0.261 Sum_probs=254.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
+++|+|+.|.+. ++.++.+.+++.+.+.......|++ .+..++|+++++++.+. .+++++|++|+|+++++.
T Consensus 19 ~~~i~l~~~~~~----~~~~~~v~~a~~~~~~~~~~~~y~~-~~~~~lr~~la~~~~~~---~~~~~~v~~~~G~~~al~ 90 (335)
T 1uu1_A 19 RDKTYLALNENP----FPFPEDLVDEVFRRLNSDALRIYYD-SPDEELIEKILSYLDTD---FLSKNNVSVGNGADEIIY 90 (335)
T ss_dssp CCSEEESSCCCS----SCCCHHHHHHHHHTCCGGGGGSCCC-SSCHHHHHHHHHHHTCS---SCCGGGEEEESSHHHHHH
T ss_pred CcceECCCCCCC----CCCCHHHHHHHHHHhhhhhhhcCCC-CchHHHHHHHHHHcCCC---CCCHHHEEEcCChHHHHH
Confidence 468999999853 4678999999998874333457866 47999999999999532 367889999999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 122 VILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
.+++++ ||+|+++ |+|+++...++..|.+++.++++ .++.+|++.+ +++++|++++|+||||.++|.++
T Consensus 91 ~~~~~~---gd~Vl~~-p~y~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~ 159 (335)
T 1uu1_A 91 VMMLMF---DRSVFFP-PTYSCYRIFAKAVGAKFLEVPLT--KDLRIPEVNV-----GEGDVVFIPNPNNPTGHVFEREE 159 (335)
T ss_dssp HHHHHS---SEEEECS-SSCHHHHHHHHHHTCEEEECCCC--TTSCCCCCCC-----CTTEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHh---CCcEEEC-CCcHHHHHHHHHcCCeEEEeccC--CCCCCCHHHc-----CCCCEEEEeCCCCCCCCCCCHHH
Confidence 999999 8999999 99999999999999999888764 3467787776 46888999999999999999888
Q ss_pred HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 281 (419)
+++|+++| | ++|+||+|+.+.+. +. +..++..+++++++|+||.++++|+|+||+++++ ++++.
T Consensus 160 l~~l~~~~---~-~li~De~~~~~~~~--~~--~~~~~~~~~~i~~~s~sK~~g~~G~r~G~~~~~~--------~~~~~ 223 (335)
T 1uu1_A 160 IERILKTG---A-FVALDEAYYEFHGE--SY--VDFLKKYENLAVIRTFSKAFSLAAQRVGYVVASE--------KFIDA 223 (335)
T ss_dssp HHHHHHTT---C-EEEEECTTHHHHCC--CC--GGGGGTCSSEEEEEESTTTTTCGGGCCEEEEECH--------HHHHH
T ss_pred HHHHHHhC---C-EEEEECcchhhcch--hH--HHHhhhCCCEEEEecchhhcCCcccCeEEEEeCH--------HHHHH
Confidence 88888876 7 89999999986532 21 2223444578999999999988999999999954 57777
Q ss_pred HHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCC
Q 014769 282 IKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDIN 361 (419)
Q Consensus 282 l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~ 361 (419)
++.... .++++.+.|.++.++++. .+++++.+++++++++.+.+.|+++ ++. + .|.+|+|+|++++. .
T Consensus 224 l~~~~~-~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~~~~~~~------~ 291 (335)
T 1uu1_A 224 YNRVRL-PFNVSYVSQMFAKVALDH--REIFEERTKFIVEERERMKSALREM-GYR-I-TDSRGNFVFVFMEK------E 291 (335)
T ss_dssp HHHHSC-TTCSCHHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHHHHHHHHH-TCC-B-CCCCSSEEEEECCT------H
T ss_pred HHHhcC-CCCcCHHHHHHHHHHhCC--HHHHHHHHHHHHHHHHHHHHHHHHC-CcE-E-cCCCCeEEEEECCC------C
Confidence 776543 357889999999999986 4678888999999999999999887 666 4 46667899998863 1
Q ss_pred CHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHHH
Q 014769 362 DDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKAF 411 (419)
Q Consensus 362 ~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~~ 411 (419)
+..++...|+ ++||.+.|+ ++++|++++. ++++++++++|+++
T Consensus 292 ~~~~~~~~l~-~~gi~v~~~-----~~~iRis~~~-~~~i~~~~~~l~~~ 334 (335)
T 1uu1_A 292 EKERLLEHLR-TKNVAVRSF-----REGVRITIGK-REENDMILRELEVF 334 (335)
T ss_dssp HHHHHHHHHH-HHTEEEEEE-----TTEEEEECCC-HHHHHHHHHHHHCC
T ss_pred CHHHHHHHHH-HCCEEEEEC-----CCeEEEEeCC-HHHHHHHHHHHHhh
Confidence 3556777775 579999983 5799999975 56799999988754
No 82
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=100.00 E-value=5.7e-38 Score=298.92 Aligned_cols=337 Identities=15% Similarity=0.121 Sum_probs=263.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
++++|||+.|+| +.+++++.+.+++.+.+... ....|.++.|..++++++++++.+.+|. +++++|+|+++
T Consensus 42 g~~~idl~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~----~~v~~~~ggt~ 114 (398)
T 3a2b_A 42 GRRVLMFGSNSY---LGLTTDTRIIKAAQDALEKYGTGCAGSRFLNGTLDIHVELEEKLSAYVGK----EAAILFSTGFQ 114 (398)
T ss_dssp TEEEEECSCSCT---TCGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHHTC----SEEEEESSHHH
T ss_pred CceEEEeecccc---cCCCCCHHHHHHHHHHHHHcCCCCCCcCcccCCcHHHHHHHHHHHHHhCC----CcEEEECCHHH
Confidence 567899999976 23557889999998887542 2335666778889999999998886663 58999999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCCCCccc
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINPGNPCG 194 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p~nptG 194 (419)
++..+++++.++||.|++++|+|..+...+...|.+++.+++ +|++.+++.+++ +++++++++|+||||
T Consensus 115 a~~~~~~~~~~~gd~V~~~~p~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG 187 (398)
T 3a2b_A 115 SNLGPLSCLMGRNDYILLDERDHASIIDGSRLSFSKVIKYGH-------NNMEDLRAKLSRLPEDSAKLICTDGIFSMEG 187 (398)
T ss_dssp HHHHHHHHSSCTTCEEEEETTCCHHHHHHHHHSSSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESBCTTTC
T ss_pred HHHHHHHHHhCCCCEEEECCccCHHHHHHHHHcCCceEEeCC-------CCHHHHHHHHHhhccCCceEEEEeCCCCCCC
Confidence 999999999999999999999999999999999999988874 478899988876 678899999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc-EEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP-VITLGSISKRWLVPGWRFGWLVTNDPNGIF 273 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~-~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 273 (419)
.+.+ +++|.++|+++|+++|+||+|+.+.++.........++..++ +++++|+||.++.+| ||+++++
T Consensus 188 ~~~~---~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~~~G---G~~~~~~----- 256 (398)
T 3a2b_A 188 DIVN---LPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDVDLIMGTFSKSLASLG---GFVAGDA----- 256 (398)
T ss_dssp CBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEECH-----
T ss_pred CccC---HHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCCeEEEecccccccCCC---cEEEeCH-----
Confidence 9998 899999999999999999999987664222111112222233 599999999998778 9999864
Q ss_pred chhhHHHHHHhh-h-ccccCCchHHHH-HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769 274 QKSGIIDSIKDC-L-SIYSDIPTFIQG-AIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV 350 (419)
Q Consensus 274 ~~~~~~~~l~~~-~-~~~~~~~~~~~~-a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 350 (419)
++++.+... . ....+.+.+.|. ++..+++. .+++++.+++++++++.+.+.|+++ ++. +..|. |+++|+
T Consensus 257 ---~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~-g~~~~~ 328 (398)
T 3a2b_A 257 ---DVIDFLKHNARSVMFSASMTPASVASTLKALEI--IQNEPEHIEKLWKNTDYAKAQLLDH-GFD-LGATE-SPILPI 328 (398)
T ss_dssp ---HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHH--HHHCTHHHHHHHHHHHHHHHHHHHT-TCC-BCSCC-SSEEEE
T ss_pred ---HHHHHHHHhcccceecCCCCHHHHHHHHHHHHH--HhhCHHHHHHHHHHHHHHHHHHHhc-CCC-cCCCC-CCEEEE
Confidence 577777664 2 223344455555 45567765 2446678889999999999999988 777 43454 688999
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.++.. .+..++...|++ +||.+.||..|.. .+++|++++ .+++++++++++|+++++++.
T Consensus 329 ~~~~~-----~~~~~l~~~l~~-~gi~v~~~~~~~~~~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 329 FIRSN-----EKTFWVTKMLQD-DGVFVNPVVSPAVPAEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp ECCCH-----HHHHHHHHHHHH-TTEECEEECTTTSCGGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred EcCCH-----HHHHHHHHHHHH-CCcEEEeeCCCCCCCCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 88632 135677777755 4999999988863 579999997 489999999999999998754
No 83
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.7e-36 Score=285.21 Aligned_cols=318 Identities=13% Similarity=0.111 Sum_probs=250.1
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVLLP 137 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vlv~ 137 (419)
+.++.+.+++.+.+.. .|++. ..++++.+++++.+.+|. +++ +|++|+|+++++..++.+++++||+|+++
T Consensus 44 ~~~~~v~~a~~~~~~~----~~~~~--~~~~~~~~~~~la~~~g~--~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~ 115 (393)
T 1vjo_A 44 NAHPSVLQAMNVSPVG----HLDPA--FLALMDEIQSLLRYVWQT--ENPLTIAVSGTGTAAMEATIANAVEPGDVVLIG 115 (393)
T ss_dssp CCCHHHHHHHSSCCCC----TTSHH--HHHHHHHHHHHHHHHHTC--CCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCHHHHHHHhccccc----ccCHH--HHHHHHHHHHHHHHHhCC--CCCcEEEEeCchHHHHHHHHHhccCCCCEEEEE
Confidence 5678888877665432 46542 457778888887776664 567 89999999999999999999999999999
Q ss_pred CCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 138 RPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 138 ~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
+|+|++ +...++..|.+++.+++++ ++.+|++.|++++++ +++++++++|+||||.+.+ +++|.++|+++|+
T Consensus 116 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 190 (393)
T 1vjo_A 116 VAGYFGNRLVDMAGRYGADVRTISKPW--GEVFSLEELRTALETHRPAILALVHAETSTGARQP---LEGVGELCREFGT 190 (393)
T ss_dssp ESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHHTC
T ss_pred cCChhHHHHHHHHHHcCCceEEEecCC--CCCCCHHHHHHHHhhCCceEEEEeccCCCcceecc---HHHHHHHHHHcCC
Confidence 999998 8888889999999998754 457899999999987 8899999999999999998 8999999999999
Q ss_pred eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---------
Q 014769 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------- 285 (419)
Q Consensus 215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------- 285 (419)
++|+||+|+.. .....+ ...+..+++.|+||.++.+| |+||+++++ ++++.++..
T Consensus 191 ~li~Dea~~~g----~~~~~~---~~~~~di~~~s~sK~l~~~~-~~G~l~~~~--------~~~~~~~~~~~~~~~~~~ 254 (393)
T 1vjo_A 191 LLLVDTVTSLG----GVPIFL---DAWGVDLAYSCSQKGLGCSP-GASPFTMSS--------RAIEKLQRRRTKVANWYL 254 (393)
T ss_dssp EEEEECTTTTT----TSCCCT---TTTTCSEEECCSSSTTCSCS-SCEEEEECH--------HHHHHHHTCSSCCSCSTT
T ss_pred EEEEECCcccc----CcCCcc---cccCccEEEEcCcccccCCC-ceEEEEECH--------HHHHHHhccCCCCCceec
Confidence 99999999932 112222 22334588999999988887 999999975 566666431
Q ss_pred -----------hcccc-CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEe
Q 014769 286 -----------LSIYS-DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMV 350 (419)
Q Consensus 286 -----------~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~ 350 (419)
....+ +++.+.+.++..+++.....++++.+++++++++.+.+.|+++ ++. +..|.+ +.++++
T Consensus 255 ~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~ 332 (393)
T 1vjo_A 255 DMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQRHQKNVEYLWERLEDI-GLS-LHVEKEYRLPTLTTV 332 (393)
T ss_dssp CHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCC-BSSCGGGBCSSEEEE
T ss_pred CcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHc-CCc-ccCCccccCCcEEEE
Confidence 01123 6788888888888876433457888899999999999999988 777 335543 356777
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHH
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~ 412 (419)
.++.. .+..++...|++++||.+.||..|..++++||++ + ++++++++++++|++++
T Consensus 333 ~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 333 CIPDG-----VDGKAVARRLLNEHNIEVGGGLGELAGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred EcCCC-----CCHHHHHHHHHhhCCEEEecCccccCCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 77531 2567788888665699999999887789999995 3 56778999999999876
No 84
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=100.00 E-value=4.6e-36 Score=287.74 Aligned_cols=336 Identities=13% Similarity=0.183 Sum_probs=253.7
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC------CCCCCCC--CCCCHHHHHHHHHHHHhhCCCCC-CCCcEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG------KFNCYAT--NSGIPPARRAIADYLSRDLPYKL-SADDVY 111 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~------~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~ 111 (419)
++++|+|+.|.+. +.++.+.+++.+.+... ....|++ ..+..++|+++++++ +. ++++|+
T Consensus 26 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~------~~~~~~~v~ 94 (420)
T 1t3i_A 26 GHPLVYLDNAATS-----QKPRAVLEKLMHYYENDNANVHRGAHQLSVRATDAYEAVRNKVAKFI------NARSPREIV 94 (420)
T ss_dssp TEECEECBTTTCC-----CCCHHHHHHHHHHHHHTCCCC--CCSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhccCCCCcccchHHHHHHHHHHHHHHHHHHHc------CCCCCCeEE
Confidence 3558999999864 45688999999887642 1224543 457789999999998 44 678999
Q ss_pred EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
+|+|+++++..++.++ .++||+|++++|+|++ +...++..|.+++.++++ .++.+|++.+++++++++++
T Consensus 95 ~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~l~~~~~~ 172 (420)
T 1t3i_A 95 YTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQLD--EQESFDLEHFKTLLSEKTKL 172 (420)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECBC--TTSSBCHHHHHHHCCTTEEE
T ss_pred EcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEeccC--CCCCcCHHHHHHhhCCCceE
Confidence 9999999999999999 8899999999999998 456667789999988875 45678999999999888899
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
|++++|+||||.+++ +++|.++|+++|+++|+|++|+.+.. ...+..++ ..+++.|+||.++.+| +||
T Consensus 173 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~~---~di~~~s~sK~~~~~g--~G~ 240 (420)
T 1t3i_A 173 VTVVHISNTLGCVNP---AEEIAQLAHQAGAKVLVDACQSAPHY----PLDVQLID---CDWLVASGHKMCAPTG--IGF 240 (420)
T ss_dssp EEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHHT---CSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCcccccCcCC---HHHHHHHHHHcCCEEEEEhhhccCCc----cCchhhcC---CCEEEEehhhhcCCCc--eEE
Confidence 999999999999999 89999999999999999999986432 11222222 4588899999877777 999
Q ss_pred EEeeCCCCccchhhHHHHHHhhhc---------------------cccCCchHHHHHHH-HHHcccchHHHHHHHHHHHH
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDCLS---------------------IYSDIPTFIQGAIP-QILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~~---------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~~ 321 (419)
+++++ ++++.++.... +..+.+.+.+.++. .+++.....++++..+++++
T Consensus 241 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~ 312 (420)
T 1t3i_A 241 LYGKE--------EILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIHNYEVE 312 (420)
T ss_dssp EEECH--------HHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred EEEch--------HHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 99865 56666654321 11234444454433 24443222346778889999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCC-----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCC
Q 014769 322 SAEICYDGVKEIPCISCPNKPE-----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKN 388 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p~-----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~ 388 (419)
+++.+.+.|++++++.++ .|. .+.++++.++. .+..++... +.++||.+.||..| +..+
T Consensus 313 ~~~~l~~~L~~~~g~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-l~~~gi~v~~~~~~~~~~~~~~g~~~ 384 (420)
T 1t3i_A 313 LTHYLWQGLGQIPQLRLY-GPNPKHGDRAALASFNVAG------LHASDVATM-VDQDGIAIRSGHHCTQPLHRLFDASG 384 (420)
T ss_dssp HHHHHHHHHHTCTTEEEE-SCCGGGSCBCSEEEEEETT------BCHHHHHHH-HHTTTEECBCSCTTCHHHHHHTTCCC
T ss_pred HHHHHHHHHHhCCCeEEe-CCCccccccCCEEEEEECC------CCHHHHHHH-HHHCCeEEeeccccchHHHHhcCCCC
Confidence 999999999998787743 443 24444556653 145666654 47789999999644 3368
Q ss_pred eEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 389 WLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 389 ~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
++||+++ .++++++++++.|+++++++.+
T Consensus 385 ~iRis~~~~~~~~~i~~~~~~l~~~~~~~~~ 415 (420)
T 1t3i_A 385 SARASLYFYNTKEEIDLFLQSLQATIRFFSD 415 (420)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHHHHHHHTC-
T ss_pred eEEEecCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 9999996 4899999999999999987643
No 85
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.3e-35 Score=279.71 Aligned_cols=322 Identities=14% Similarity=0.093 Sum_probs=252.1
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
+.++.+.+++.+.+. ..|++. ..++++.+++++.+.+|.. +++++++|+|+++++..++.+++++||+|++++
T Consensus 30 ~~~~~v~~a~~~~~~----~~~~~~--~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~ 102 (386)
T 2dr1_A 30 ACFPEVLEIMKVQMF----SHRSKE--YRKVHMDTVERLREFLEVE-KGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTI 102 (386)
T ss_dssp CCCHHHHHHTTSCCC----CTTSHH--HHHHHHHHHHHHHHHHTCS-SSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred CCcHHHHHHHhcccc----cccCHH--HHHHHHHHHHHHHHHhCCC-CCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEc
Confidence 456777777655442 245542 3678888888888777755 467899999999999999999999999999999
Q ss_pred CCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh--cCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 139 PGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA--DKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 139 p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
|+|++ +...+...|.+++.+++++ ++.+|++.|++++ .+++++|++++|+||||.+.+ +++|.++|+++|+
T Consensus 103 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 177 (386)
T 2dr1_A 103 IGAFGKRYKEVVESNGRKAVVLEYEP--GKAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNP---LPELAKVAKEHDK 177 (386)
T ss_dssp SSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECC---HHHHHHHHHHTTC
T ss_pred CCchhHHHHHHHHHhCCceEEEecCC--CCCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCC---HHHHHHHHHHcCC
Confidence 99998 8888888999999998754 4678999999998 457899999999999999998 8999999999999
Q ss_pred eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH-----------
Q 014769 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK----------- 283 (419)
Q Consensus 215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~----------- 283 (419)
++|+|++|+.+.+. .++.. .+.++++.|+||.++.++ ++||+++++ ++++.++
T Consensus 178 ~li~D~a~~~~~~~----~~~~~---~~~di~~~s~sK~~~~~~-g~G~~~~~~--------~~~~~~~~~~~~~~~~~~ 241 (386)
T 2dr1_A 178 LVFVDAVSAMGGAD----IKFDK---WGLDVVFSSSQKAFGVPP-GLAIGAFSE--------RFLEIAEKMPERGWYFDI 241 (386)
T ss_dssp EEEEECTTTBTTBC----CCTTT---TTCSEEEEETTSTTCCCS-SCEEEEECH--------HHHHHHTTCTTCCSTTCH
T ss_pred eEEEEccccccCcc----ccccc---cCCcEEEEeccccccCCC-ceEEEEECH--------HHHHHHhcCCCCceEEeH
Confidence 99999999975432 12222 234689999999977662 399999965 4555542
Q ss_pred -----hh---hccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC---ceEEEEee
Q 014769 284 -----DC---LSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPNKPE---GSMVTMVK 351 (419)
Q Consensus 284 -----~~---~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---~g~~~~~~ 351 (419)
.. ....++++.+.+.++..+++..... .+++.+++++++++.+.+.|+++ ++.+. .|. .+.++|+.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~ 319 (386)
T 2dr1_A 242 PLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMYEKRAKMVREGVREI-GLDIL-AEPGHESPTITAVL 319 (386)
T ss_dssp HHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCTTCBCSSEEEEE
T ss_pred HHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCeeC-cCccccCCceEEEE
Confidence 11 1224567888888888888753222 47788899999999999999988 77733 453 36788888
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++.. .+..++..+|+++ ||.+.||..+...+++||+++ .+++++++++++|+++++++.
T Consensus 320 ~~~~-----~~~~~~~~~l~~~-gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 380 (386)
T 2dr1_A 320 TPPG-----IKGDEVYEAMRKR-GFELAKGYGSVKEKTFRIGHMGYMKFEDIQEMLDNLREVINELK 380 (386)
T ss_dssp CCTT-----CCHHHHHHHHHHT-TEECEECCGGGTTTEEEEECCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCC-----CCHHHHHHHHHHC-CeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 8632 2567788887655 999999987766789999996 689999999999999998764
No 86
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=100.00 E-value=1.4e-35 Score=283.11 Aligned_cols=333 Identities=14% Similarity=0.160 Sum_probs=251.4
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--CCC------CCCCCCCHHHHHHHHHHHHhhCCCCC-CCCcEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--FNC------YATNSGIPPARRAIADYLSRDLPYKL-SADDVY 111 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~-~~~~i~ 111 (419)
|++++.|+.+.+. +.++.+.+++.+.+.... ... |.+..+..++|+++++++ +. ++++|+
T Consensus 21 g~~~i~l~~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~ 89 (406)
T 1kmj_A 21 GLPLAYLDSAASA-----QKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKRASLFI------NARSAEELV 89 (406)
T ss_dssp TEECEECCTTTCC-----CCCHHHHHHHHHHHHHTCCCCSSCSSHHHHHHHHHHHHHHHHHHHHT------TCSCGGGEE
T ss_pred CCceEEecCCccC-----CCCHHHHHHHHHHHHhhcCCCCCCcchHHHHHHHHHHHHHHHHHHHc------CCCCCCeEE
Confidence 4568999999863 356889999998886431 111 224457789999999998 44 578999
Q ss_pred EcccHHHHHHHHHHHh----cCCCCeEEeeCCCCCCcH----HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 112 VTLGCKQAVEVILSVL----ARPGANVLLPRPGWPYYE----GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l----~~~gd~vlv~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
+|+|+++++..++.++ .++||+|+++.|+|++.. ..+...|.+++.+++++ ++.+|++.+++++++++++
T Consensus 90 ~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~l~~~~~~ 167 (406)
T 1kmj_A 90 FVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPLNP--DGTLQLETLPTLFDEKTRL 167 (406)
T ss_dssp EESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECBCT--TSCBCGGGHHHHCCTTEEE
T ss_pred EeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEecCC--CCCcCHHHHHHHhccCCeE
Confidence 9999999999999999 889999999999998643 34667799999888753 4678999999999888899
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW 263 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~ 263 (419)
|++++|+||||.++| +++|.++|+++|+++|+|++|+.+.. ...+..+ +..+++.|+||.++.+| +||
T Consensus 168 v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~g~~----~~~~~~~---~~d~~~~s~~K~~g~~G--~G~ 235 (406)
T 1kmj_A 168 LAITHVSNVLGTENP---LAEMITLAHQHGAKVLVDGAQAVMHH----PVDVQAL---DCDFYVFSGHKLYGPTG--IGI 235 (406)
T ss_dssp EEEESBCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTS----CCCHHHH---TCSEEEEEGGGTTSCTT--CEE
T ss_pred EEEeCCCccccCcCC---HHHHHHHHHHcCCEEEEEchhhcCCC----CCccccc---CCCEEEEEchhccCCCC--cEE
Confidence 999999999999999 99999999999999999999986321 1122222 34588999999987777 899
Q ss_pred EEeeCCCCccchhhHHHHHHhhhc----------------------cccCCchHHHHHHH-HHHcccchHHHHHHHHHHH
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDCLS----------------------IYSDIPTFIQGAIP-QILEKTKEDFFCKLIDTLR 320 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~~----------------------~~~~~~~~~~~a~~-~~l~~~~~~~~~~~~~~~~ 320 (419)
+++++ ++++.++.... +..+.+.+.+.++. .+++.....++++..++++
T Consensus 236 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~ 307 (406)
T 1kmj_A 236 LYVKE--------ALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNIAEYEQ 307 (406)
T ss_dssp EEECH--------HHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred EEEeH--------HHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 99864 56666654321 11223444444333 4555432345678888899
Q ss_pred HHHHHHHHHhhcCCCCCCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------CCCCeE
Q 014769 321 ESAEICYDGVKEIPCISCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------GLKNWL 390 (419)
Q Consensus 321 ~~~~~l~~~l~~~~~~~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------~~~~~~ 390 (419)
++++.+.+.|+++|++.++ .| .++++.| .++. .+..++...| .++||.+.||..| +.++++
T Consensus 308 ~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~-~~~~------~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~g~~~~i 378 (406)
T 1kmj_A 308 NLMHYALSQLESVPDLTLY-GPQNRLGVIAF-NLGK------HHAYDVGSFL-DNYGIAVRTGHHCAMPLMAYYNVPAMC 378 (406)
T ss_dssp HHHHHHHHHHTTSTTEEEE-SCTTCCSEEEE-EETT------CCHHHHHHHH-HHTTEECEEECTTCHHHHHHTTCSCEE
T ss_pred HHHHHHHHHHhcCCCeEEe-cCCCcCCEEEE-EECC------CCHHHHHHHH-hhCCcEEEeccccchHHHHhcCCCCeE
Confidence 9999999999998787733 55 5666554 5642 1456676555 7789999998753 346899
Q ss_pred EEEeec--CHHHHHHHHHHHHHHHHHH
Q 014769 391 RIAFCA--EPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 391 Ris~~~--~~~~l~~~l~~l~~~~~~~ 415 (419)
||+++. ++++++++++.|+++++.+
T Consensus 379 Ris~~~~~t~~~i~~~~~~l~~~~~~l 405 (406)
T 1kmj_A 379 RASLAMYNTHEEVDRLVTGLQRIHRLL 405 (406)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEeecCCCHHHHHHHHHHHHHHHHhh
Confidence 999963 8999999999999998764
No 87
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=100.00 E-value=3.8e-35 Score=279.44 Aligned_cols=334 Identities=14% Similarity=0.118 Sum_probs=247.7
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC----C--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF----N--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~----~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+.++|||+.|+|- .++.++.+.+++.+.+..... . .|+...+..++++.+++++ +.+ +.|++++
T Consensus 42 g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------~~~-~~i~~~s 111 (399)
T 3tqx_A 42 EKEVLNFCANNYL---GLADHPALIKTAQTVVEQYGFGMASVRFICGTQTIHKELEKDISEFL------GTD-DTILYSS 111 (399)
T ss_dssp TEEEEECSSCCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCCCCCCCBHHHHHHHHHHHHHH------TCS-EEEEESC
T ss_pred CeeEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCcCccccCchHHHHHHHHHHHHH------CCC-cEEEECc
Confidence 4568999999642 235678899999888764111 1 1223334688899999887 222 4555555
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeC
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~ 188 (419)
+++++..++.+++++||.|+++.|+|..+...++..|.++..++. .|++.+++.+++ +++++++++
T Consensus 112 -Gt~a~~~~l~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~~ 183 (399)
T 3tqx_A 112 -CFDANGGLFETLLGPEDAIISDELNHASIIDGIRLCKAQRYRYKN-------NAMGDLEAKLKEADEKGARFKLIATDG 183 (399)
T ss_dssp -HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHSCCSEEEEECT-------TCTTHHHHHHHHHHTTTCSSEEEEEES
T ss_pred -hHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCceeEeCC-------CCHHHHHHHHHhhhccCCCceEEEEeC
Confidence 578999999999999999999999999999999999999888874 366777777765 788999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
|+||||.++| +++|.++|+++|+++|+||+|+...++..........+. ..+.++++|+||.++ |++.||++++
T Consensus 184 ~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~--g~~gG~~~~~ 258 (399)
T 3tqx_A 184 VFSMDGIIAD---LKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTLGKALG--GASGGYTSGH 258 (399)
T ss_dssp EETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEESSSSSC--SSCCEEEEEC
T ss_pred CCCCCCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecchHhcc--cCceEEEEcC
Confidence 9999999999 999999999999999999999743333222111222221 234589999999976 4555999986
Q ss_pred CCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+ ++++.+.... ..+.+.+...+.++...++... ++.++.+++++++++.+.+.|+++ ++. +. +..
T Consensus 259 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~-~~~ 326 (399)
T 3tqx_A 259 K--------EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLK-TEGPQLRKQLQENSRYFRAGMEKL-GFQ-LV-PGN 326 (399)
T ss_dssp H--------HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHH-HTHHHHHHHHHHHHHHHHHHHHHH-TCC-BC-CCS
T ss_pred H--------HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHc-CCC-cC-CCC
Confidence 5 5777776542 2234667777777777776521 557888899999999999999987 777 42 445
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
|.++|+.++.. .+..++..+|++ +||.+.|+..+.. .+++|++++ .+++++++++++|+++++++
T Consensus 327 ~~~~~~~~~~~-----~~~~~~~~~l~~-~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 396 (399)
T 3tqx_A 327 HPIIPVMLGDA-----QLATNMADHLLQ-EGIYVVGFSYPVVPMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKL 396 (399)
T ss_dssp SSEEEEEEECH-----HHHHHHHHHHHH-TTEECCEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEeCCH-----HHHHHHHHHHHH-CCCEEeeeCCCCCCCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHh
Confidence 56778877642 135677777755 7999998765532 469999995 68999999999999999875
No 88
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=100.00 E-value=3.4e-35 Score=278.21 Aligned_cols=324 Identities=14% Similarity=0.077 Sum_probs=241.5
Q ss_pred CChHHHHHHHHHHHhCCCC-----C--CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---
Q 014769 59 RTAVEAEDAIVDAVRSGKF-----N--CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA--- 128 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~-----~--~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--- 128 (419)
++++.+.+++.+.+..... . .|....+..++++++++++ ++++++|++|+|+++++..++.++.
T Consensus 12 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~~~~~~ 85 (384)
T 1eg5_A 12 RVDDRVLEEMIVFYREKYGNPNSAHGMGIEANLHMEKAREKVAKVL------GVSPSEIFFTSCATESINWILKTVAETF 85 (384)
T ss_dssp CCCHHHHHHHHHHHHTCCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TSCGGGEEEESCHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhcCCCCccccHHHHHHHHHHHHHHHHHHHHc------CCCCCeEEEECCHHHHHHHHHHhhhhhc
Confidence 5688999999998875210 0 1223355688999999998 5677899999999999999999998
Q ss_pred -CCCCeEEeeCCCCCCcHHHH---hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769 129 -RPGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 129 -~~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
++||+|++++|+|+++...+ ...|.+++.+++++ ++.+|++.|+++++++++++++++|+||||.++| +++
T Consensus 86 ~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~ 160 (384)
T 1eg5_A 86 EKRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDS--RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQP---VED 160 (384)
T ss_dssp TTTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCT--TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCC---HHH
T ss_pred cCCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCC--CCccCHHHHHHHhCCCCeEEEEECCCCCcccccC---HHH
Confidence 79999999999999875555 67799998888753 4679999999999888899999999999999999 789
Q ss_pred HHHHHHhCC--CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769 205 IAEMARKLR--VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282 (419)
Q Consensus 205 i~~~~~~~~--~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l 282 (419)
|.++|+++| +++|+|++|+. +. ....+..+ +..+++.|+||.++.+| +||++++++-.+ ...+
T Consensus 161 i~~l~~~~~~~~~li~Dea~~~---~~-~~~~~~~~---~~di~~~s~sK~~g~~G--~G~~~~~~~~~~------~~~~ 225 (384)
T 1eg5_A 161 VTRIVKKKNKETLVHVDAVQTI---GK-IPFSLEKL---EVDYASFSAHKFHGPKG--VGITYIRKGVPI------RPLI 225 (384)
T ss_dssp HHHHHHHHCTTCEEEEECTTTT---TT-SCCCCTTT---CCSEEEEEGGGGTSCTT--CEEEEECTTSCC------CCSB
T ss_pred HHHHHHhcCCceEEEEEhhhhc---CC-cccCchhc---CCCEEEecHHHhcCCCc--eEEEEEcCCCcc------cccc
Confidence 999999999 99999999983 22 11122222 34588999999988778 899999763100 1111
Q ss_pred Hhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--eEEEEeecCccc
Q 014769 283 KDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG--SMVTMVKLNPWL 356 (419)
Q Consensus 283 ~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~--g~~~~~~~~~~~ 356 (419)
... ....++++.+.+.++..+++.. .+++++.+++++++++.+.+.|++ +++.++..+.+ +.++++.++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~-~g~~~~~~~~~~~~~~~~~~~~~-- 301 (384)
T 1eg5_A 226 HGGGQERGLRSGTQNVPGIVGAARAMEIA-VEELSEAAKHMEKLRSKLVSGLMN-LGAHIITPLEISLPNTLSVSFPN-- 301 (384)
T ss_dssp CSSCTTTTTBCSCCCHHHHHHHHHHHHHH-HHTHHHHHHHHHHHHHHHHHHHHT-TTCEECSCTTSBCTTEEEEECTT--
T ss_pred ccCcccccccCCCCChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhCC-CCeEEeCCcccCCCCEEEEEeCC--
Confidence 110 1134567888888888888752 346788889999999999999988 47763322222 3455666652
Q ss_pred ccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 357 LEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+..++...| .++||.+.+|..|+. .+++||+++ .+++++++++++|+++++++
T Consensus 302 ----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 302 ----IRGSTLQNLL-SGYGIYVSTSSACTSKDERLRHVLDAMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp ----CCHHHHHHHH-HHTTEECBC------------CHHHHTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred ----CCHHHHHHHH-hhCCeEEeccccccCCCCcchHHHHHcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 1466777666 678999999887642 368999997 68999999999999999876
Q ss_pred hc
Q 014769 416 TK 417 (419)
Q Consensus 416 ~~ 417 (419)
.+
T Consensus 377 ~~ 378 (384)
T 1eg5_A 377 DL 378 (384)
T ss_dssp --
T ss_pred Hh
Confidence 43
No 89
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=100.00 E-value=7.9e-35 Score=276.71 Aligned_cols=332 Identities=14% Similarity=0.082 Sum_probs=251.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCK 117 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~ 117 (419)
....++++.|. +++++.+.+++.+.+.. .|.+ ..+..++++.+++++ +.+++ +|++|+|++
T Consensus 17 ~~~~~~~~~g~------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------g~~~~~~i~~~~g~t 80 (393)
T 2huf_A 17 TPNKLLMGPGP------SNAPQRVLDAMSRPILG----HLHPETLKIMDDIKEGVRYLF------QTNNIATFCLSASGH 80 (393)
T ss_dssp CCCCEECSSSC------CCCCHHHHHHTTSCCCC----TTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESSCHH
T ss_pred CCCeEEecCCC------CCCCHHHHHHHHhhhcc----CCCHHHHHHHHHHHHHHHHHh------CCCCCcEEEEcCcHH
Confidence 45667777773 35678888887765533 2322 246678999999988 45665 899999999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccc
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCG 194 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG 194 (419)
+++..++.++.++||+|++++|+|+++ ...++..|.+++.+++++ ++.+|++.+++++++ ++++|++++|+||||
T Consensus 81 ~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 158 (393)
T 2huf_A 81 GGMEATLCNLLEDGDVILIGHTGHWGDRSADMATRYGADVRVVKSKV--GQSLSLDEIRDALLIHKPSVLFLTQGDSSTG 158 (393)
T ss_dssp HHHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHHhCCCCEEEEECCCcchHHHHHHHHHcCCeeEEEeCCC--CCCCCHHHHHHHHhccCCcEEEEEccCCCcc
Confidence 999999999999999999999999874 234566799999998754 356899999999987 889999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCc-CCCCCceeEEEEeeCCCCcc
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKR-WLVPGWRFGWLVTNDPNGIF 273 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~-~~~~G~r~G~~~~~~~~~~~ 273 (419)
.++| +++|.++|+++|+++|+|++++... ....+.. .+..+++.|+||+ ++.+|+ ||+++++
T Consensus 159 ~~~~---l~~i~~~~~~~~~~li~D~a~~~~~----~~~~~~~---~~~d~~~~s~sK~l~g~~G~--G~~~~~~----- 221 (393)
T 2huf_A 159 VLQG---LEGVGALCHQHNCLLIVDTVASLGG----APMFMDR---WEIDAMYTGSQKVLGAPPGI--TPVSFSH----- 221 (393)
T ss_dssp EECC---CTTHHHHHHHTTCEEEEECTTTBTT----BCCCTTT---TTCSEEECCSSSTTCCCSSC--EEEEECH-----
T ss_pred ccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCcchhh---cCccEEEECCCcccccCCCe--EEEEECH-----
Confidence 9999 8999999999999999999987421 1112222 2345888999997 446775 9999864
Q ss_pred chhhHHHHHHhhh----c--------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769 274 QKSGIIDSIKDCL----S--------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 274 ~~~~~~~~l~~~~----~--------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
++++.++... . ..++++...+.++..+++......+++..++++++++.+.+.
T Consensus 222 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (393)
T 2huf_A 222 ---RAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIARHEDCAKRLYRG 298 (393)
T ss_dssp ---HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHH
Confidence 5677665430 1 113456666666666666532234778888999999999999
Q ss_pred hhcCCCCCCCCCCC---ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHH
Q 014769 330 VKEIPCISCPNKPE---GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKD 403 (419)
Q Consensus 330 l~~~~~~~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~ 403 (419)
|+++ ++.++ .|. .+++++++++.. .+..++...|++++||.+.+|..+...+++|+++ + ++++++++
T Consensus 299 L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~~Ri~~~~~~~~~e~i~~ 371 (393)
T 2huf_A 299 LQDA-GFELY-ADPKDRLSTVTTIKVPQG-----VDWLKAAQYAMKTYLVEISGGLGPTAGQVFRIGLMGQNATTERVDR 371 (393)
T ss_dssp HHHT-TCCBS-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCSHHHHHH
T ss_pred HHHc-CCeec-cCccccCCcEEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCcccccCCEEEEEcccCcCCHHHHHH
Confidence 9988 77733 442 345777877531 2567788888766799999998876788999999 6 46889999
Q ss_pred HHHHHHHHHHHHhc
Q 014769 404 GLGRMKAFCQRHTK 417 (419)
Q Consensus 404 ~l~~l~~~~~~~~~ 417 (419)
++++|+++++++.+
T Consensus 372 ~~~~l~~~~~~~~~ 385 (393)
T 2huf_A 372 VLQVFQEAVAAVKP 385 (393)
T ss_dssp HHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHcCC
Confidence 99999999987654
No 90
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=100.00 E-value=6.4e-35 Score=276.52 Aligned_cols=329 Identities=14% Similarity=0.106 Sum_probs=246.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC---CCCC--CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK---FNCY--ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~---~~~Y--~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+..+|||+.|.+ +.+++++.+.+++.+.+.. +. ...| +...+..++|+++++++ +++ +.+++++
T Consensus 38 g~~~id~~~~~~---~~~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~s 107 (384)
T 1bs0_A 38 DRQYLNFSSNDY---LGLSHHPQIIRAWQQGAEQFGIGSGGSGHVSGYSVVHQALEEELAEWL------GYS-RALLFIS 107 (384)
T ss_dssp TEEEEECSCCCT---TSGGGCHHHHHHHHHHHHHHCSCCCSBTTTTCCCHHHHHHHHHHHHHH------TCS-EEEEESC
T ss_pred CceEEEeeccCc---cCCCCCHHHHHHHHHHHHHhCCCCCCcCcccCChHHHHHHHHHHHHHh------CCC-cEEEeCC
Confidence 667899999864 2345678999999988764 21 1223 44567789999999998 333 4455555
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC---ccEEEEeCCCC
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN---TAAMVIINPGN 191 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~---~~~v~i~~p~n 191 (419)
| ++++..++.++.++||.|+++.|+|..+...+...|.+++.++. .|++.+++.+++. ++++++++|+|
T Consensus 108 G-t~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~v~~~~~~n 179 (384)
T 1bs0_A 108 G-FAANQAVIAAMMAKEDRIAADRLSHASLLEAASLSPSQLRRFAH-------NDVTHLARLLASPCPGQQMVVTEGVFS 179 (384)
T ss_dssp H-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTSSSEEEEECT-------TCHHHHHHHHHSCCSSCEEEEEESBCT
T ss_pred c-HHHHHHHHHHhCCCCcEEEEcccccHHHHHHHHHcCCCEEEeCC-------CCHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 5 89999999999999999999999999988888889999888763 4788898887653 67778889999
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
|||.+++ +++|.++|+++|+++|+||+|+.+.++.........++. ...++++|+||.++.+| ||+++++
T Consensus 180 ptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~di~~~s~sK~~~~~G---G~~~~~~--- 249 (384)
T 1bs0_A 180 MDGDSAP---LAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKV-KPELLVVTFGKGFGVSG---AAVLCSS--- 249 (384)
T ss_dssp TTCCBCC---HHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTC-CCSEEEEESSSTTSSCC---EEEEECH---
T ss_pred CCCCccC---HHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCC-CCcEEEeeccchhhccC---cEEEeCH---
Confidence 9999999 889999999999999999999876543111111112222 23388999999988766 9999864
Q ss_pred ccchhhHHHHHHhhh-c--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769 272 IFQKSGIIDSIKDCL-S--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~-~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 348 (419)
++++.++... . .+.+++++.+.++.++++.....+.++.+++++++++.+.+.|+++ ++. + .+..+.++
T Consensus 250 -----~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~~~~~~~~ 321 (384)
T 1bs0_A 250 -----TVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDL-PFT-L-ADSCSAIQ 321 (384)
T ss_dssp -----HHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTS-SCE-E-CSCCSSBC
T ss_pred -----HHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhc-CCc-c-cCCCCCEE
Confidence 5777776542 1 2235778888777777765221266788899999999999999987 666 4 34566677
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEeec--CHHHHHHHHHHHHHH
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFCA--EPSALKDGLGRMKAF 411 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~~--~~~~l~~~l~~l~~~ 411 (419)
|+.++.. .+..++...|+ ++||.+.|+..|+. .+++|++++. +++++++++++|+++
T Consensus 322 ~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~~Ri~~~~~~~~~~i~~~~~~l~~~ 383 (384)
T 1bs0_A 322 PLIVGDN-----SRALQLAEKLR-QQGCWVTAIRPPTVPAGTARLRLTLTAAHEMQDIDRLLEVLHGN 383 (384)
T ss_dssp CEEEESH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEECCBCCTTCCHHHHHHHHHHHHHH
T ss_pred EEEeCCH-----HHHHHHHHHHH-HCCcEEEeecCCCCCCCCceEEEEEcCCCCHHHHHHHHHHHHhh
Confidence 8877531 13566777775 45999999988753 3789999963 899999999999864
No 91
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=1.2e-33 Score=268.79 Aligned_cols=319 Identities=16% Similarity=0.111 Sum_probs=233.7
Q ss_pred eeeccCCCCCCCCCCCChHHHHHHHHHHHh---C-CCCCCCCCCCCCH---HHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 44 VVPLGYGDPTAFPCFRTAVEAEDAIVDAVR---S-GKFNCYATNSGIP---PARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 44 ~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~---~-~~~~~Y~~~~g~~---~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
..+++.|+|. ++.++.+.+++.+.++ . .....|+. .|.+ ++++++++++ +. +++++++|+
T Consensus 20 ~~~~~~~~p~----~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~-~~~~~~~~l~~~ia~~~------g~--~~~i~~~~g 86 (404)
T 1e5e_A 20 DQFGAAIPPI----YQTSTFVFDNCQQGGNRFAGQESGYIYTR-LGNPTVSNLEGKIAFLE------KT--EACVATSSG 86 (404)
T ss_dssp CTTCCSSCCC----CCCSBCCCSSHHHHHHHHTTSSCSCCBTT-TCCHHHHHHHHHHHHHH------TC--SEEEEESSH
T ss_pred CCCCCcCCCC----cCCCccccCCHHHHHHhhcCCcCCccccC-CcChHHHHHHHHHHHHh------CC--CcEEEeCCh
Confidence 3567888764 4444444444444332 2 22346877 5777 8999999998 22 378888888
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCc
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNP 192 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~np 192 (419)
++++..++.+++++||+|+++.|+|.++.. .++..|.+++.++++ |++.+++++++++++|++++|+||
T Consensus 87 ~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~t~~v~l~~p~Np 159 (404)
T 1e5e_A 87 MGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTA-------IPGEVKKHMKPNTKIVYFETPANP 159 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTT-------STTHHHHHCCTTEEEEEEESSCTT
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCC-------CHHHHHHhcCCCCcEEEEECCCCC
Confidence 999999999999999999999999998877 678889999888753 778999999888999999999999
Q ss_pred cccCCCHHHHHHHHHHHHh-CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCC
Q 014769 193 CGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPN 270 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~ 270 (419)
||.+++ +++|.++|++ +|+++|+|++|..+.+. .++ .+ +.++++.|+||.++++|+|+ ||+++++
T Consensus 160 tG~v~~---l~~i~~la~~~~~~~li~De~~~~~~~~----~~~-~~---~~di~~~S~sK~~~~~g~ri~G~~~~~~-- 226 (404)
T 1e5e_A 160 TLKIID---MERVCKDAHSQEGVLVIADNTFCSPMIT----NPV-DF---GVDVVVHSATKYINGHTDVVAGLICGKA-- 226 (404)
T ss_dssp TCCCCC---HHHHHHHHHTSTTCEEEEECTTTCTTTC----CGG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--
T ss_pred CCcccC---HHHHHHHHHhhcCCEEEEECCCchhhhC----Ccc-cc---CCEEEEEcCccccCCCCCCeEEEEEECH--
Confidence 999998 9999999999 99999999999987653 122 22 35689999999999999998 9999875
Q ss_pred CccchhhHHH-HHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-------------
Q 014769 271 GIFQKSGIID-SIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP------------- 334 (419)
Q Consensus 271 ~~~~~~~~~~-~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~------------- 334 (419)
++++ .++..... ....++..+.++...++. +....++..++.+.+.+.|++.+
T Consensus 227 ------~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~ 295 (404)
T 1e5e_A 227 ------DLLQQIRMVGIKDITGSVISPHDAWLITRGLST-----LNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDH 295 (404)
T ss_dssp ------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSS
T ss_pred ------HHHHHHHHHHHHhCCCCCCCHHHHHHHHHhHhH-----HHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCC
Confidence 5666 77765443 345678888888777764 23333344455555555555432
Q ss_pred -CCCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-----------------------
Q 014769 335 -CISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL----------------------- 386 (419)
Q Consensus 335 -~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~----------------------- 386 (419)
++. +..| .++++.| +++. ..+.+.+++++.|| +.+|..|+.
T Consensus 296 p~~~-~~~~~~~~~g~~~~~-~~~~--------~~~~~~~~l~~~~i-~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~ 364 (404)
T 1e5e_A 296 EGHD-IAKKQMRMYGSMITF-ILKS--------GFEGAKKLLDNLKL-ITLAVSLGGCESLIQHPASMTHAVVPKEEREA 364 (404)
T ss_dssp TTHH-HHHHHCSSCCSEEEE-EETT--------HHHHHHHHHHTCSS-SEESSCCCSSSCEEECGGGTTTTTSCHHHHHH
T ss_pred ccHH-HHHhhCCCCceEEEE-EeCC--------CHHHHHHHHHhCCC-ceeccCCCCcceeeecccccccccCCHHHHHh
Confidence 222 1112 2666666 7752 33445667788899 566665542
Q ss_pred ----CCeEEEEeecCHHHHHHHHHHHHHHHHHHhccC
Q 014769 387 ----KNWLRIAFCAEPSALKDGLGRMKAFCQRHTKKH 419 (419)
Q Consensus 387 ----~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~~~~ 419 (419)
++++|||++. |+++++++.|++++....+.|
T Consensus 365 ~g~~~~~iRis~g~--e~~~~li~~l~~al~~~~~~~ 399 (404)
T 1e5e_A 365 AGITDGMIRLSVGI--EDADELIADFKQGLDALLRSH 399 (404)
T ss_dssp TTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHHCC-
T ss_pred cCCCCCeEEEEeCC--CCHHHHHHHHHHHHHHHHHhc
Confidence 5799999988 789999999999998776543
No 92
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=100.00 E-value=3.3e-34 Score=275.29 Aligned_cols=338 Identities=17% Similarity=0.145 Sum_probs=249.8
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC-CCCCCCCCCC----HHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-FNCYATNSGI----PPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-~~~Y~~~~g~----~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
+|+++|||+.|++ ..+..++.+.+++.+++.. +. ...|....|. .++++.+++++ +. ++++++
T Consensus 62 ~g~~~id~~~~~~---lg~~~~~~v~~a~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~la~~~------g~--~~~i~~ 130 (427)
T 2w8t_A 62 RGKDTILLGTYNY---MGMTFDPDVIAAGKEALEKFGSGTCGSRMLNGTFHDHMEVEQALRDFY------GT--TGAIVF 130 (427)
T ss_dssp TTEEEEECSCCCT---TCGGGCHHHHHHHHHHHHHHCSCCCSCTTTTCCCHHHHHHHHHHHHHH------TC--SEEEEE
T ss_pred CCceEEEEECccc---ccCCCCHHHHHHHHHHHHHhCCCCcccccccCCcHHHHHHHHHHHHHh------CC--CceEEe
Confidence 3567899999974 2345788999999988764 21 2233333444 77888888877 22 356666
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----CccEEEEeCC
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----NTAAMVIINP 189 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----~~~~v~i~~p 189 (419)
+++++++..++.+++++||.|+++.|+|..+...+...|.+++.++. .|++.|++++++ ++++|++++|
T Consensus 131 ~sGs~a~~~al~~l~~~gd~vl~~~~~h~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~~~~v~~~~~ 203 (427)
T 2w8t_A 131 STGYMANLGIISTLAGKGEYVILDADSHASIYDGCQQGNAEIVRFRH-------NSVEDLDKRLGRLPKEPAKLVVLEGV 203 (427)
T ss_dssp SCHHHHHHHHHHHHSCTTCEEEEETTCCHHHHHHHHHSCSEEEEECT-------TCHHHHHHHHHTSCSSSCEEEEEESE
T ss_pred cCcHHHHHHHHHHhcCCCCEEEECCcccHHHHHHHHHcCCeeEEeCC-------CCHHHHHHHHHhccCCCCeEEEEcCC
Confidence 66677999999999999999999999999999999999998887763 488999988865 6788899999
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+||||.+.+ +++|.++|+++|+++|+||+|+.+.++.........++. .+.+++++|+||.++++| ||+++++
T Consensus 204 ~n~tG~~~~---l~~l~~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g~~g---G~v~~~~ 277 (427)
T 2w8t_A 204 YSMLGDIAP---LKEMVAVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVGTVG---GFVVSNH 277 (427)
T ss_dssp ETTTTEECC---HHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTCSCC---EEEEECC
T ss_pred CCCCCCccC---HHHHHHHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhccCC---CEEEeCH
Confidence 999999999 999999999999999999999998775322211111221 234688999999987666 9999865
Q ss_pred CCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769 269 PNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
++++.+.... ..+++.++..+.++..+++... ..++.+++++++++.+.+.|+++ ++.+...+..|
T Consensus 278 --------~l~~~l~~~~~~~~~~~~~~~~~~aa~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~ 346 (427)
T 2w8t_A 278 --------PKFEAVRLACRPYIFTASLPPSVVATATTSIRKLM--TAHEKRERLWSNARALHGGLKAM-GFRLGTETCDS 346 (427)
T ss_dssp --------TTGGGGGGTCHHHHSSCCCCHHHHHHHHHHHHHHT--SCHHHHHHHHHHHHHHHHHHHHH-TCEESCSSCCS
T ss_pred --------HHHHHHHHhcccccccCCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHc-CCcccCCCCCC
Confidence 3444444431 1234566666666667776522 24677888999999999999887 67633133256
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
.++|+.++.. .+..++...|++ +||.+.|+..|+. .+++|++++ .+++++++++++|+++++++.+.
T Consensus 347 ~~~~~~~~~~-----~~~~~l~~~L~~-~Gi~v~~~~~~~~~~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~~~~ 418 (427)
T 2w8t_A 347 AIVAVMLEDQ-----EQAAMMWQALLD-GGLYVNMARPPATPAGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAVGVI 418 (427)
T ss_dssp SEEEEEESSH-----HHHHHHHHHHHH-TTEECEEECTTTSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEEECCH-----HHHHHHHHHHHH-CCeEEeeeCCCCCCCCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHhCcc
Confidence 6888888632 135567777755 5999999988764 368999996 48999999999999999887543
No 93
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=100.00 E-value=3.3e-35 Score=278.96 Aligned_cols=330 Identities=15% Similarity=0.136 Sum_probs=246.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC---CC---CCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK---FN---CYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~---~~---~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
++++.|+.+.+ .+.++.+.+++.+.+.... .. .|+. ..+..++|+++++++ ++++++|++|+
T Consensus 15 ~~~i~l~~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~y~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 83 (390)
T 1elu_A 15 ANKTYFNFGGQ-----GILPTVALEAITAMYGYLQENGPFSIAANQHIQQLIAQLRQALAETF------NVDPNTITITD 83 (390)
T ss_dssp TTSEECCTTTC-----CCCCHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHHHHHHT------TSCGGGEEEES
T ss_pred CCeEEecCCcc-----CCCCHHHHHHHHHHHHHHhccCCcchhhHHHHHHHHHHHHHHHHHHc------CCCHHHEEEeC
Confidence 45789988863 2456788899888775421 01 3443 357789999999998 56778999999
Q ss_pred cHHHHHHHHHHHh-cCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCC
Q 014769 115 GCKQAVEVILSVL-ARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 115 g~~~al~~~~~~l-~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
|+++++..++.++ .++||+|+++.|+|+++... ++..|.+++.++++++.++.+|++.+++++++++++|++++|
T Consensus 84 g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 163 (390)
T 1elu_A 84 NVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATLNQGDAAAVLANHLGPKTRLVILSHL 163 (390)
T ss_dssp SHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGSSSSCHHHHHHTTCCTTEEEEEEESB
T ss_pred ChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCCCccchHHHHHHhcCCCceEEEEecc
Confidence 9999999999999 78999999999999986543 466799999998764356788999999999888899999999
Q ss_pred CCccccCCCHHHHHHHHHHHH----hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE
Q 014769 190 GNPCGNVFTYHHLQEIAEMAR----KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~----~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 265 (419)
+||||.++| +++|.++|+ ++|+++|+|++|+... ....+ ......+++.|+||. ..+|.++||++
T Consensus 164 ~nptG~~~~---~~~i~~l~~~~~~~~~~~li~Dea~~~g~----~~~~~---~~~~~d~~~~s~~K~-~~~~~g~G~~~ 232 (390)
T 1elu_A 164 LWNTGQVLP---LAEIMAVCRRHQGNYPVRVLVDGAQSAGS----LPLDF---SRLEVDYYAFTGHKW-FAGPAGVGGLY 232 (390)
T ss_dssp CTTTCCBCC---HHHHHHHHHHCCSSSCCEEEEECTTTBTT----BCCCT---TTSCCSEEEEESSST-TCCCTTCEEEE
T ss_pred ccCCceecC---HHHHHHHHhhhhhhcCcEEEEEcccccCC----cCCCh---hhcCCCEEEcccccc-ccCCCceEEEE
Confidence 999999999 899999999 9999999999998532 11122 222345889999994 45667799999
Q ss_pred eeCCCCccchhhHHHHHHhh-----------------------hccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHH
Q 014769 266 TNDPNGIFQKSGIIDSIKDC-----------------------LSIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRE 321 (419)
Q Consensus 266 ~~~~~~~~~~~~~~~~l~~~-----------------------~~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~ 321 (419)
+++ ++++.++.. ....++++...+.++..+++.... .++++..+++++
T Consensus 233 ~~~--------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~~~~~~~~~~ 304 (390)
T 1elu_A 233 IHG--------DCLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTAEERYQAICQ 304 (390)
T ss_dssp ECT--------TTGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred ECH--------HhHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 975 233333321 111345566777766666654222 347888899999
Q ss_pred HHHHHHHHhhcCCCCCCCC--CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cC
Q 014769 322 SAEICYDGVKEIPCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AE 397 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~ 397 (419)
+++.+.+.|++++++.++. .+.++++ +++++.. .+..++...| .++||.+.+|. .++++||+++ .+
T Consensus 305 ~~~~l~~~L~~~~g~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~~~~l-~~~gi~v~~~~---~~~~iRis~~~~~~ 374 (390)
T 1elu_A 305 RSEFLWRGLNQLPHVHCLATSAPQAGLV-SFTVDSP-----LGHRAIVQKL-EEQRIYLRTIA---DPDCIRACCHYITD 374 (390)
T ss_dssp HHHHHHHHHHHSTTEEESCSSCCSSSEE-EEEECSS-----SCHHHHHHHH-HHTTEECEEET---TTTEEEEECCTTCC
T ss_pred HHHHHHHHHHhcCCcEEecCccccccEE-EEEcCCC-----CCHHHHHHHH-HHCCEEEEecC---CCCeEEEecccCCC
Confidence 9999999999887877332 1245544 4577531 2466777777 56799999986 3579999984 68
Q ss_pred HHHHHHHHHHHHHH
Q 014769 398 PSALKDGLGRMKAF 411 (419)
Q Consensus 398 ~~~l~~~l~~l~~~ 411 (419)
++++++++++|+++
T Consensus 375 ~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 375 EEEINHLLARLADF 388 (390)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998753
No 94
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=100.00 E-value=1.7e-34 Score=275.12 Aligned_cols=335 Identities=16% Similarity=0.108 Sum_probs=245.8
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CC-----CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GK-----FNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~-----~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
|.++++|..++.. .++.+|.+.+++.+.+.. .. ...|+...+..++|+++++++ +. +++|++++
T Consensus 45 g~~~i~~~~~~~~---~~~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~-~~~i~~~s 114 (401)
T 2bwn_A 45 KQDITVWCGNDYL---GMGQHPVVLAAMHEALEAVGAGSGGTRNISGTTAYHRRLEAEIAGLH------QK-EAALVFSS 114 (401)
T ss_dssp EEEEEECSCSCTT---SGGGCHHHHHHHHHHHHHHCSCCCSBTTTBCCBHHHHHHHHHHHHHT------TC-SEEEEESC
T ss_pred CCcEEEeeCCCcc---cCCCCHHHHHHHHHHHHHcCCCCCCcCcccCChHHHHHHHHHHHHHh------CC-CcEEEECC
Confidence 4556888876532 244567899999988764 11 123556567899999999998 22 57888887
Q ss_pred cHHHHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc----CCccEEEEeC
Q 014769 115 GCKQAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD----KNTAAMVIIN 188 (419)
Q Consensus 115 g~~~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~v~i~~ 188 (419)
|++ ++..++..+. .+||.|+++.|+|+.+...++..|.+++.++.+ |++.+++.++ +++++|++++
T Consensus 115 G~~-a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~le~~l~~~~~~~~~~v~~~~ 186 (401)
T 2bwn_A 115 AYN-ANDATLSTLRVLFPGLIIYSDSLNHASMIEGIKRNAGPKRIFRHN-------DVAHLRELIAADDPAAPKLIAFES 186 (401)
T ss_dssp HHH-HHHHHHHHHHHHSTTCEEEEETTCCHHHHHHHHHSCCCEEEECTT-------CHHHHHHHHHHSCTTSCEEEEEES
T ss_pred cHH-HHHHHHHHHhcCCCCCEEEECchhhHHHHHHHHHcCCeEEEEcCC-------CHHHHHHHHHhhccCCceEEEEec
Confidence 776 7777766654 589999999999999988888899998888752 6777877765 4688999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
|+||||.++| +++|.++|+++|+++|+||+|+.+.++..+...+...+. ...+++++|+||.++++| ||++++
T Consensus 187 ~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~sK~~~~~G---G~~~~~ 260 (401)
T 2bwn_A 187 VYSMDGDFGP---IKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTLAKAYGVFG---GYIAAS 260 (401)
T ss_dssp BCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEESSSTTCSCC---EEEEEC
T ss_pred CcCCCCCcCC---HHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeechhhccCCC---CEEecC
Confidence 9999999999 899999999999999999999965553222111111121 123588999999998888 999885
Q ss_pred CCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.++... ....+.+++.+.++..+++......+++.+++++++++.+.+.|+++ ++. +..+.+
T Consensus 261 ~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~ 330 (401)
T 2bwn_A 261 A--------RMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL-GMP-IIDHGS 330 (401)
T ss_dssp H--------HHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH-TCC-BCCCSS
T ss_pred H--------HHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC-CCc-ccCCCC
Confidence 4 5666665432 22233445677777777765333445778889999999999999887 777 335655
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCC---CeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLK---NWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~---~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+ ++|+.++.. .+..++...|++++||.+.|+..|+.+ +++|++++ .+++++++++++|+++++++
T Consensus 331 ~-~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~~~~~~~~~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~~ 400 (401)
T 2bwn_A 331 H-IVPVVIGDP-----VHTKAVSDMLLSDYGVYVQPINFPTVPRGTERLRFTPSPVHDLKQIDGLVHAMDLLWARC 400 (401)
T ss_dssp S-CEEEECCCH-----HHHHHHHHHHHHHHCEECCEECTTTSCTTCCEEEECCCTTSCHHHHHHHHHHHHHHC---
T ss_pred C-eEEEEeCCh-----HHHHHHHHHHHhcCCEEEeecCCCCCCCCCceEEEEeeCCCCHHHHHHHHHHHHHHHHhc
Confidence 5 778888631 135667777766789999999877643 58999996 58999999999999887653
No 95
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=100.00 E-value=3.5e-34 Score=272.19 Aligned_cols=321 Identities=14% Similarity=0.034 Sum_probs=239.8
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
+.++.+++++.+.+.. ...|....+..++|+++++++ +.++++|++|+|+++++..++.++.++||+|++++
T Consensus 19 ~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~ 90 (392)
T 2z9v_A 19 NAYPEVLRGLGRTVLY--DYDPAFQLLYEKVVDKAQKAM------RLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLA 90 (392)
T ss_dssp CCCHHHHHHTTSCCCC--TTSHHHHHHHHHHHHHHHHHT------TCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEE
T ss_pred CCCHHHHHHHhccccc--cccHHHHHHHHHHHHHHHHHh------CCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEec
Confidence 5678888887766543 111222345678888998887 45678999999999999999999999999999999
Q ss_pred CCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 139 PGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 139 p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
|+|+++ ...+...|.+++.+++++ ++.+|++.++++++ +++++|++++|+||||.+++ +++|.++|+++|+
T Consensus 91 ~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~ 165 (392)
T 2z9v_A 91 SGVYGKGFGYWAKRYSPHLLEIEVPY--NEAIDPQAVADMLKAHPEITVVSVCHHDTPSGTINP---IDAIGALVSAHGA 165 (392)
T ss_dssp SSHHHHHHHHHHHHHCSCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEEGGGTEECC---HHHHHHHHHHTTC
T ss_pred CCcccHHHHHHHHHcCCceEEeeCCC--CCCCCHHHHHHHHhcCCCCcEEEEeccCCCCceecc---HHHHHHHHHHcCC
Confidence 999875 344455799999998754 34689999999884 47889999999999999999 8899999999999
Q ss_pred eEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHhh--------
Q 014769 215 MVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------- 285 (419)
Q Consensus 215 ~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------- 285 (419)
++|+|++|+... ....+..+ +..+++.|+||++ +.+| +||+++++ ++++.++..
T Consensus 166 ~li~D~a~~~g~----~~~~~~~~---~~d~~~~s~sK~~~~~~g--~G~l~~~~--------~~~~~l~~~~~g~~~~~ 228 (392)
T 2z9v_A 166 YLIVDAVSSFGG----MKTHPEDC---KADIYVTGPNKCLGAPPG--LTMMGVSE--------RAWAKMKANPLAPRASM 228 (392)
T ss_dssp EEEEECTTTBTT----BSCCGGGG---TCSEEEECSSSTTCCCSC--CEEEEECH--------HHHHHHHTCTTSCCSST
T ss_pred eEEEEcccccCC----cccccccc---cceEEEecCcccccCCCc--eeEEEECH--------HHHHHhhhccCCCCcee
Confidence 999999998522 11122222 2348889999963 3345 59999865 566666431
Q ss_pred -------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceEEE
Q 014769 286 -------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSMVT 348 (419)
Q Consensus 286 -------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~~~ 348 (419)
....++++...+.++..+++......+++.+++++++++.+.+.|+++ ++.++ .|. .+.++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~ 306 (392)
T 2z9v_A 229 LSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHALTAKAMRAGVTAM-GLSVW-AASDSIASPTTT 306 (392)
T ss_dssp TCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGBCTTEE
T ss_pred ccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCCccccCCceE
Confidence 011344566666666666654222226778889999999999999887 77743 422 46677
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHh
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++.++.. .+..++..+|.+++||.+.+|..+...+++|+++ + .+++++++++++|+++++++.
T Consensus 307 ~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~~ 372 (392)
T 2z9v_A 307 AVRTPDG-----VDEKALRQAARARYGVVFSSGRGETLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAAG 372 (392)
T ss_dssp EEECCTT-----CCHHHHHHHHHHHHCEECEECCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred EEECCCC-----CCHHHHHHHHHhcCCEEEecCCCCCCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHcC
Confidence 8887531 2567788777665699999998776688999996 4 689999999999999998765
No 96
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=100.00 E-value=2.7e-34 Score=273.29 Aligned_cols=321 Identities=13% Similarity=0.111 Sum_probs=244.4
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCC-C-CCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYAT-N-SGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANVL 135 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~-~-~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~vl 135 (419)
++++.+.+++.+.+.. .|.+ + ....++|+++++++ +.+++ +|++|+|+++++..++.++.++||+|+
T Consensus 28 ~~~~~v~~a~~~~~~~----~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl 97 (396)
T 2ch1_A 28 NCSKRVLTAMTNTVLS----NFHAELFRTMDEVKDGLRYIF------QTENRATMCVSGSAHAGMEAMLSNLLEEGDRVL 97 (396)
T ss_dssp CCCHHHHHHTTSCCCC----TTCHHHHHHHHHHHHHHHHHH------TCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEE
T ss_pred CCCHHHHHHhcccccc----CCChhHHHHHHHHHHHHHHHh------CCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEE
Confidence 4567777776554321 3433 1 23689999999998 55677 899999999999999999999999999
Q ss_pred eeCCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 136 LPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 136 v~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
+++|+|+++. ..++..|.+++.+++++ ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|+++
T Consensus 98 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~ 172 (396)
T 2ch1_A 98 IAVNGIWAERAVEMSERYGADVRTIEGPP--DRPFSLETLARAIELHQPKCLFLTHGDSSSGLLQP---LEGVGQICHQH 172 (396)
T ss_dssp EEESSHHHHHHHHHHHHTTCEEEEEECCT--TSCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHHT
T ss_pred EEcCCcccHHHHHHHHHcCCceEEecCCC--CCCCCHHHHHHHHHhCCCCEEEEECCCCCCceecC---HHHHHHHHHHc
Confidence 9999999874 46788899999998753 567999999999887 7899999999999999999 88999999999
Q ss_pred CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------
Q 014769 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC------- 285 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~------- 285 (419)
|+++|+|++|+.. .....+..++ ..+++.|++|.++ .+.++|++++++ ++++.++..
T Consensus 173 ~~~li~Dea~~~g----~~~~~~~~~~---~d~~~~s~~K~~~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~~ 236 (396)
T 2ch1_A 173 DCLLIVDAVASLC----GVPFYMDKWE---IDAVYTGAQKVLG-APPGITPISISP--------KALDVIRNRRTKSKVF 236 (396)
T ss_dssp TCEEEEECTTTBT----TBCCCTTTTT---CCEEECCCC-CCC-CCSSCEEEEECH--------HHHHHHHTCSSCCSCG
T ss_pred CCEEEEEcccccc----CCccchhhcC---cCEEEEcCCcccc-CCCCeEEEEECH--------HHHHhhhhccCcccce
Confidence 9999999999842 1122222222 2366789999743 334579998864 455555321
Q ss_pred -----------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc----
Q 014769 286 -----------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---- 344 (419)
Q Consensus 286 -----------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---- 344 (419)
....++++...+.++..+++....+++++..++++++++.+.+.|+++ ++.++ .+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~ 314 (396)
T 2ch1_A 237 YWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKRRIECAQILYEGLGKM-GLDIF-VKDPRHRL 314 (396)
T ss_dssp GGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-TCCBS-SCSGGGBC
T ss_pred EechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCeec-cCCccccC
Confidence 112245677788888778775334567888899999999999999987 77733 4544
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+.+++++++.. .+..++..+|++++||.+.+|..+..++++||++ + .+++++++++++|+++++++.+
T Consensus 315 ~~~~~~~~~~~-----~~~~~~~~~L~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~~~~ 385 (396)
T 2ch1_A 315 PTVTGIMIPKG-----VDWWKVSQYAMNNFSLEVQGGLGPTFGKAWRVGIMGECSTVQKIQFYLYGFKESLKATHP 385 (396)
T ss_dssp TTEEEEECCTT-----CCHHHHHHHHHHHHCBCCBCCCGGGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHHCT
T ss_pred CceEEEEcCCC-----CCHHHHHHHHHHhCCEEEecCccccCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHHhCc
Confidence 24778877531 2567888888776799999988766678999999 4 3789999999999999988754
No 97
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=100.00 E-value=1.1e-35 Score=280.33 Aligned_cols=326 Identities=11% Similarity=0.069 Sum_probs=240.5
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHH-HHHHHHhhCCCCCCCCcEE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRA-IADYLSRDLPYKLSADDVY 111 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~-ia~~l~~~~~~~~~~~~i~ 111 (419)
+++++.|+.|.+. .++++.+.+++.+.+.... ...|.+..+..++++. +++++ +.+ +|+
T Consensus 6 ~~~~i~ld~~~~~----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~la~~~------~~~--~v~ 73 (371)
T 2e7j_A 6 TKDFINIDPLQTG----GKLTEEARQALLEWGDGYSVCDFCTTGRLDEIKTPPIHDFIHNQLPKFL------GCD--VAR 73 (371)
T ss_dssp --CCEECCHHHHT----CCCCHHHHHHHHHC--------------------CCHHHHHHTHHHHHT------TSS--EEE
T ss_pred CCCcEEecccccC----CCCCHHHHHHHHHHHhhcccCCccccccchhhHHHHHHHHHHHHHHHHc------CCC--EEE
Confidence 5578888887532 3567899999988775431 1234556789999999 99998 333 999
Q ss_pred EcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEe--ccCCCCcccChHHHHHhhc-----CCccEE
Q 014769 112 VTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFD--LLPERNWEVDLDAVEALAD-----KNTAAM 184 (419)
Q Consensus 112 ~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~--~~~~~~~~~~~~~l~~~~~-----~~~~~v 184 (419)
+|+|+++++..++.++.++||+|++++|+|+++...+...|.+++.++ ++ .++.+|++.|+++++ ++++++
T Consensus 74 ~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~~--~~~~~d~~~l~~~l~~~~~~~~~~~v 151 (371)
T 2e7j_A 74 VTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVAAERAGLNIALVPKTDY--PDYAITPENFAQTIEETKKRGEVVLA 151 (371)
T ss_dssp EESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTTCEEEEECCCCT--TTCCCCHHHHHHHHHHHTTTSCEEEE
T ss_pred EeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHHHHHcCCeEEEeecccC--CCCCcCHHHHHHHHHhhcccCCeEEE
Confidence 999999999999999999999999999999999888999999999988 54 346799999999887 678899
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWL 264 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~ 264 (419)
++++|+||||.+++ +++|.++|+++|+++|+|++|+.+... .++..++. .+++.|+||.++.+ .|+||+
T Consensus 152 ~~~~~~nptG~~~~---~~~i~~~~~~~~~~li~D~a~~~~~~~----~~~~~~~~---di~~~s~sK~~~~~-~~~G~~ 220 (371)
T 2e7j_A 152 LITYPDGNYGNLPD---VKKIAKVCSEYDVPLLVNGAYAIGRMP----VSLKEIGA---DFIVGSGHKSMAAS-GPIGVM 220 (371)
T ss_dssp EEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTTBTTBC----CCHHHHTC---SEEEEEHHHHSSCC-SSCEEE
T ss_pred EEECCCCCCcccCC---HHHHHHHHHHcCCeEEEECccccCCCC----CChhhcCC---CEEEecCCcCCCCC-CCcEEE
Confidence 99999999999999 799999999999999999999985431 12223332 38899999986654 599999
Q ss_pred EeeCCCCccchhhHHHH-HHhhhc---c-----ccCCchHHHHHHHHHHcccchHHHHHHHHHH--HHHHHHHHHHhhcC
Q 014769 265 VTNDPNGIFQKSGIIDS-IKDCLS---I-----YSDIPTFIQGAIPQILEKTKEDFFCKLIDTL--RESAEICYDGVKEI 333 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~-l~~~~~---~-----~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~ 333 (419)
+++++ +++. ++.... . .++++...+.++..+++... . +..+++ +++++.+.+.|+++
T Consensus 221 ~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~-~---~~~~~~~~~~~~~~l~~~L~~~ 288 (371)
T 2e7j_A 221 GMKEE--------WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVR-E---RIKRWDEEVEKARRFAAEMEKL 288 (371)
T ss_dssp EECTT--------TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHH-H---HGGGHHHHHHHHHHHHHHHHHT
T ss_pred EEech--------hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHH-H---HHHHHHHHHHHHHHHHHHHHHc
Confidence 99762 3333 333221 1 34455555656555655321 1 556677 78888899999887
Q ss_pred CCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC------CCeEE-EEee---cCHHHH
Q 014769 334 PCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL------KNWLR-IAFC---AEPSAL 401 (419)
Q Consensus 334 ~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~~R-is~~---~~~~~l 401 (419)
++..+ .|. .+.++|++++ +..++...| .++||.+.| ..+.. ++++| ++++ .+++++
T Consensus 289 -~~~~~-~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~~~~-~~~~~~~~g~~~~~iRii~~~~~~~~~~~i 356 (371)
T 2e7j_A 289 -GIKQL-GDNPHNHDLMFFHAE--------VLYEISKKA-KGGRFFLYR-ELKSRKIHGIKPGLTRYFKLSTYGLSDEEV 356 (371)
T ss_dssp -TCEEE-SSSSCCSSEEEEECH--------HHHHHHHHS-SSGGGHHHH-HHHHTTEECSCTTCCSEEEEECTTCCHHHH
T ss_pred -CcEEe-cCCCccCceEEEECC--------CHHHHHHHH-HHCCEEEEe-ccccccccCCCCCceEEEEeeccCCCHHHH
Confidence 77633 443 3557888874 245666666 578999988 43322 67899 9996 689999
Q ss_pred HHHHHHHHHHHHHH
Q 014769 402 KDGLGRMKAFCQRH 415 (419)
Q Consensus 402 ~~~l~~l~~~~~~~ 415 (419)
++++++|+++++++
T Consensus 357 ~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 357 DYVLNAFKEIIEKY 370 (371)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhc
Confidence 99999999998764
No 98
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=100.00 E-value=4.6e-34 Score=272.22 Aligned_cols=332 Identities=14% Similarity=0.123 Sum_probs=250.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhC-CCC---CCCC--CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRS-GKF---NCYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~-~~~---~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
++..+|||+.|+|- .++.++.+.+++.+.+.. +.. ..|. ...+..++|+++++++ +.+ +.|+++
T Consensus 43 ~g~~~id~~~~~~~---g~~~~~~v~~a~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~~-~~i~~~ 112 (401)
T 1fc4_A 43 DGSHVINFCANNYL---GLANHPDLIAAAKAGMDSHGFGMASVRFICGTQDSHKELEQKLAAFL------GME-DAILYS 112 (401)
T ss_dssp TSCEEEECCCSCTT---SCTTCHHHHHHHHHHHHHHCSCCCSCHHHHCCBHHHHHHHHHHHHHH------TCS-EEEEES
T ss_pred CCccEEEeeccCcc---cccCCHHHHHHHHHHHHHhCCCCCCCCcccCCcHHHHHHHHHHHHHh------CCC-cEEEeC
Confidence 47789999999641 122578999999888764 211 1222 2456789999999998 444 555555
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEe
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVII 187 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~ 187 (419)
+ +++++..++++++++||.|+++.|+|..+...+...|.+++.++. .|++.+++.+++ ++++|+++
T Consensus 113 s-Gs~a~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~l~~~l~~~~~~~~~~~~v~~~ 184 (401)
T 1fc4_A 113 S-CFDANGGLFETLLGAEDAIISDALNHASIIDGVRLCKAKRYRYAN-------NDMQELEARLKEAREAGARHVLIATD 184 (401)
T ss_dssp C-HHHHHHTTHHHHCCTTCEEEEETTCCHHHHHHHHTSCSEEEEECT-------TCHHHHHHHHHHHHHTTCSSEEEEEE
T ss_pred C-hHHHHHHHHHHHcCCCCEEEEcchhHHHHHHHHHHcCCceEEECC-------CCHHHHHHHHHHhhccCCCceEEEEe
Confidence 5 477999999999999999999999998888888888999887762 477888887764 67899999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc-cccc-CCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEE
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTF-GSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWL 264 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~ 264 (419)
+|+||||.+++ +++|.++|+++|+++|+||+|+ ++.+ .+........+.. +.+++++|+||.+ +.+| ||+
T Consensus 185 ~~~nptG~~~~---~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~-~~di~~~s~sK~~~~~~g---G~~ 257 (401)
T 1fc4_A 185 GVFSMDGVIAN---LKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMG-RVDIITGTLGKALGGASG---GYT 257 (401)
T ss_dssp SEETTTTEECC---HHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTT-CCSEEEEESSSTTCSSSC---EEE
T ss_pred CCcCCCCCCCC---HHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCc-CCcEEEecchhhccCCCC---EEE
Confidence 99999999999 8999999999999999999996 6553 3333222122222 3458899999997 5554 999
Q ss_pred EeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769 265 VTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK 341 (419)
Q Consensus 265 ~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 341 (419)
++++ ++++.+.... ..+.+++.+.+.++..+++.. +..++.+++++++++.+.+.|+++ ++. + .
T Consensus 258 ~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~ 324 (401)
T 1fc4_A 258 AARK--------EVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMV--EAGSELRDRLWANARQFREQMSAA-GFT-L-A 324 (401)
T ss_dssp EECH--------HHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHH--HTCHHHHHHHHHHHHHHHHHHHHT-TCC-B-C
T ss_pred EcCH--------HHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-c
Confidence 9854 5777776543 124577888888888887652 124677888899999999999988 777 4 2
Q ss_pred CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 342 PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 342 p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
|..++++|+.++.. .+..++...|. ++||.+.++..|+. .+++|++++ .+++++++++++|+++++++
T Consensus 325 ~~~~~~~~~~~~~~-----~~~~~l~~~l~-~~gi~v~~~~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 397 (401)
T 1fc4_A 325 GADHAIIPVMLGDA-----VVAQKFARELQ-KEGIYVTGFFYPVVPKGQARIRTQMSAAHTPEQITRAVEAFTRIGKQL 397 (401)
T ss_dssp CSSSSEEEEEEECH-----HHHHHHHHHHH-HTTEECCEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEcCCh-----HHHHHHHHHHH-HCCcEEeeecCCCCCCCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 66788889888531 13556776764 56999999987764 358999996 68999999999999999875
No 99
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=1.2e-33 Score=264.32 Aligned_cols=318 Identities=14% Similarity=0.097 Sum_probs=237.5
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~ 137 (419)
.++++.+++++.+.+.. ...|....+..++|+++++++ +.+++++++|+|+++++..++.++.++||+|+++
T Consensus 10 ~~~~~~v~~a~~~~~~~--~~~~~~~~~~~~l~~~la~~~------g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~ 81 (352)
T 1iug_A 10 VRLHPKALEALARPQLH--HRTEAAREVFLKARGLLREAF------RTEGEVLILTGSGTLAMEALVKNLFAPGERVLVP 81 (352)
T ss_dssp CCCCHHHHHHHHSCCCC--TTSHHHHHHHHHHHHHHHHHH------TCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEE
T ss_pred CCCCHHHHHHhccCCCC--ccCHHHHHHHHHHHHHHHHHh------CCCCceEEEcCchHHHHHHHHHhccCCCCeEEEE
Confidence 46678898988876642 112222345688999999998 5567899999999999999999999999999999
Q ss_pred CCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC--C
Q 014769 138 RPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL--R 213 (419)
Q Consensus 138 ~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~--~ 213 (419)
+|+|+++. ..+...|.+++.++++. ++.+|++.+++ ++++++++++|+||||.+++ +++|.++|+++ |
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~---~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~ 153 (352)
T 1iug_A 82 VYGKFSERFYEIALEAGLVVERLDYPY--GDTPRPEDVAK---EGYAGLLLVHSETSTGALAD---LPALARAFKEKNPE 153 (352)
T ss_dssp ECSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCTTTSCC---SSCSEEEEESEETTTTEECC---HHHHHHHHHHHCTT
T ss_pred eCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHhc---cCCcEEEEEEecCCcceecC---HHHHHHHHHhhCCC
Confidence 99999864 44566799999998754 34678887766 57889999999999999999 88999999999 9
Q ss_pred CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH---------HH-
Q 014769 214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS---------IK- 283 (419)
Q Consensus 214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~---------l~- 283 (419)
+++|+|++|+... ....+..+ +..+++.|+||+++.+ .++||+++++ ++++. ++
T Consensus 154 ~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~-~g~G~~~~~~--------~~~~~~~~~~~~~~~~~ 217 (352)
T 1iug_A 154 GLVGADMVTSLLV----GEVALEAM---GVDAAASGSQKGLMCP-PGLGFVALSP--------RALERLKPRGYYLDLAR 217 (352)
T ss_dssp CEEEEECTTTBTT----BCCCSGGG---TCSEEEEESSSTTCCC-SCEEEEEECH--------HHHHTCCCCSSTTCHHH
T ss_pred CEEEEECCccccC----cceecccc---CeeEEEecCcccccCC-CceeEEEECH--------HHHHHhhCCCceeeHHH
Confidence 9999999997421 11122222 2347889999953332 3489999865 33322 11
Q ss_pred ---hh--hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC-ceEEEEeecCcccc
Q 014769 284 ---DC--LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE-GSMVTMVKLNPWLL 357 (419)
Q Consensus 284 ---~~--~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~-~g~~~~~~~~~~~~ 357 (419)
.. ....++++...+.++..+++..... +++.+++++++++.+.+.|+++ ++. +..|. .+.++|++++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~-~~~~~~~~~~~~~~l~~~L~~~-g~~-~~~~~~~~~~~~~~~~~~-- 292 (352)
T 1iug_A 218 ELKAQKEGESAWTPAINLVLAVAAVLEEVLPR-LEEHLALKAWQNALLYGVGEEG-GLR-PVPKRFSPAVAAFYLPEG-- 292 (352)
T ss_dssp HHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGG-HHHHHHHHHHHHHHHHHHHHHT-TCE-ESCSSBCTTCEEEECCTT--
T ss_pred HHhhcccCCCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHC-CCc-ccccccCCeEEEEEcCCC--
Confidence 11 1224566777777777777653323 7788899999999999999987 777 43553 677888888631
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
.+..++...|. ++||.+.+|..+..++++|++++ .+++++++++++|++++++..
T Consensus 293 ---~~~~~~~~~l~-~~gi~v~~~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 349 (352)
T 1iug_A 293 ---VPYARVKEAFA-QRGAVIAGGQGPLKGKVFRLSLMGAYDRYEALGVAGMFREVLEEIL 349 (352)
T ss_dssp ---CCHHHHHHHHH-TTTEECEECCGGGTTTEEEECCCSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred ---CCHHHHHHHHH-HCCEEEEeCCCccCCCEEEEEccccCCHHHHHHHHHHHHHHHHHhc
Confidence 25677877775 56999999985545789999996 478999999999999988763
No 100
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=100.00 E-value=1.9e-33 Score=269.78 Aligned_cols=333 Identities=15% Similarity=0.168 Sum_probs=243.5
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC------------CCCCHHHHHHHHHHHHhhCCCCCC
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT------------NSGIPPARRAIADYLSRDLPYKLS 106 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------------~~g~~~lr~~ia~~l~~~~~~~~~ 106 (419)
..++++|.|..+.+. ++++.+.+++.+.+.... .|+. ..+..++++.+++++ +.+
T Consensus 18 ~~~~~~iyld~~~~~-----~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~ 84 (423)
T 3lvm_A 18 RAMKLPIYLDYSATT-----PVDPRVAEKMMQFMTMDG--TFGNPASRSHRFGWQAEEAVDIARNQIADLV------GAD 84 (423)
T ss_dssp --CCSSEECBTTTCC-----CCCHHHHHHHTTSSSTTS--CCSCTTCTTSHHHHHHHHHHHHHHHHHHHHH------TCC
T ss_pred cccCCCEeecCCCcC-----CCCHHHHHHHHHHHhhcc--cccCCCccccchhHHHHHHHHHHHHHHHHHc------CCC
Confidence 357888888877642 567889898887765111 2221 123367888888887 567
Q ss_pred CCcEEEcccHHHHHHHHHHHhcC----CCCeEEeeCCCCCCcHHHH---hhcCCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769 107 ADDVYVTLGCKQAVEVILSVLAR----PGANVLLPRPGWPYYEGIA---QRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~----~gd~vlv~~p~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
+++|++|+|+++++..++.++.+ +||+|+++.|+|+++...+ ...|.+++.+++++ ++.+|++.|++++++
T Consensus 85 ~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~ 162 (423)
T 3lvm_A 85 PREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQLEREGFEVTYLAPQR--NGIIDLKELEAAMRD 162 (423)
T ss_dssp GGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHHHHTTCEEEEECCCT--TSCCCHHHHHHHCCT
T ss_pred CCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHHHHcCCEEEEeccCC--CCccCHHHHHHhcCC
Confidence 78999999999999999998874 7999999999999887666 44599999988754 567899999999998
Q ss_pred CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCc
Q 014769 180 NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGW 259 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~ 259 (419)
+++++++++|+||||.++| +++|.++|+++|+++|+|++|+.... ...+..+ +..+++.|+||.++.+|
T Consensus 163 ~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~sK~~g~~g- 231 (423)
T 3lvm_A 163 DTILVSIMHVNNEIGVVQD---IAAIGEMCRARGIIYHVDATQSVGKL----PIDLSQL---KVDLMSFSGHKIYGPKG- 231 (423)
T ss_dssp TEEEEECCSBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTS---CCSEEEEESTTTTSCSS-
T ss_pred CcEEEEEeCCCCCCccccC---HHHHHHHHHHcCCEEEEEhhhhcCCC----CcChhhc---CCCEEEechHHhcCCCC-
Confidence 8899999999999999999 88899999999999999999876221 1122222 24488899999876666
Q ss_pred eeEEEEeeCCCCccchhhHHHHHHhhh--------ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 260 RFGWLVTNDPNGIFQKSGIIDSIKDCL--------SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 260 r~G~~~~~~~~~~~~~~~~~~~l~~~~--------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
+|+++++++. .+.+.... ...++++...+.++..+++.. ..++++..++++++++.+.+.|+
T Consensus 232 -~G~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~ 301 (423)
T 3lvm_A 232 -IGALYVRRKP--------RVRIEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIA-KEEMATEMERLRGLRNRLWNGIK 301 (423)
T ss_dssp -CEEEEECBTT--------BCCCCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEEEEEeccc--------cCCCCccccCCcccccccCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999987531 11222211 113455666666666666542 23478888999999999999999
Q ss_pred cCCCCCCCCCCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCe
Q 014769 332 EIPCISCPNKPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNW 389 (419)
Q Consensus 332 ~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~ 389 (419)
++|++.++ .+.+ +.++++.++. .+..++...| .+ |.+.+|..|.. .++
T Consensus 302 ~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~l~~~l-~~--i~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~ 371 (423)
T 3lvm_A 302 DIEEVYLN-GDLEHGAPNILNVSFNY------VEGESLIMAL-KD--LAVSSGSACTSASLEPSYVLRALGLNDELAHSS 371 (423)
T ss_dssp TSTTEEEE-SCSTTBCTTEEEEEETT------SCHHHHHHHT-TT--EECBCCCC-----CCCCHHHHHHTCCHHHHHTE
T ss_pred cCCCEEEe-CCccccCCCeEEEEeCC------CCHHHHHHHH-hh--heeccCccccCCCccccHHHHHhCCCccccCce
Confidence 88887744 3332 2344444532 2456666655 44 88999876543 389
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 390 LRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+||+++ .++++++++++.|+++++++.+
T Consensus 372 iRi~~~~~~t~e~i~~~~~~l~~~~~~~~~ 401 (423)
T 3lvm_A 372 IRFSLGRFTTEEEIDYTIELVRKSIGRLRD 401 (423)
T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHhhc
Confidence 999995 4789999999999999987754
No 101
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=100.00 E-value=3.9e-33 Score=263.91 Aligned_cols=326 Identities=13% Similarity=0.056 Sum_probs=239.8
Q ss_pred CChHHHHHHHHHHHhCCC--C-CCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc---
Q 014769 59 RTAVEAEDAIVDAVRSGK--F-NCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA--- 128 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~--~-~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~--- 128 (419)
++++.+++++.+.+.... . ..|.. ..+..++|+++++++ +.++++|++|+|+++++..++.++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g~t~a~~~~~~~l~~~~ 84 (382)
T 4eb5_A 11 PVDERILEAMLPYMTESFGNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAMRN 84 (382)
T ss_dssp CCCHHHHHHHHHHHHTSCCCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCTTEEEEEESSHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhccCCCCCCcHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEcCchHHHHHHHHHHHHhhc
Confidence 568999999999886421 1 11332 235677888888887 4567899999999999999999998
Q ss_pred -CCCCeEEeeCCCCCCcHHHHh---hcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHH
Q 014769 129 -RPGANVLLPRPGWPYYEGIAQ---RKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 129 -~~gd~vlv~~p~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
++||+|++++|+|+++...+. ..|.+++.+++++ ++.+|++.++++++++++++++++|+||||.+++ +++
T Consensus 85 ~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~ 159 (382)
T 4eb5_A 85 ARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVGK--YGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---VEE 159 (382)
T ss_dssp GGGCCEEEEETTCCHHHHHHHHHHTTTTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---HHH
T ss_pred cCCCCEEEECCCcchHHHHHHHHHHhCCcEEEEeccCC--CCccCHHHHHHHhcCCCeEEEEeccCCCccccCC---HHH
Confidence 899999999999998765554 3689999988753 4578999999999888889999999999999999 889
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH-H
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI-K 283 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l-~ 283 (419)
|.++|+++|++ |+|++|+.. .....+..+ +..+++.|+||.++.+| +||++++++..+. ...... .
T Consensus 160 i~~l~~~~~~~-i~D~a~~~g----~~~~~~~~~---~~di~~~s~sK~~g~~g--~G~~~~~~~~~l~---~~~~~~~~ 226 (382)
T 4eb5_A 160 ISEVLAGKAAL-HIDATASVG----QIEVDVEKI---GADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGGGQ 226 (382)
T ss_dssp HHHHHTTSSEE-EEECTTTBT----TBCCCHHHH---TCSEEEEETGGGTCCSS--CEEEEEETTCCCC---CSSCSSCT
T ss_pred HHHHHHHCCCE-EEEcchhcC----CcccCcccc---CCCEEEeehHHhcCCCc--eEEEEEccccccC---ceecCCCc
Confidence 99999999999 999999842 111122222 23488899999876666 7999987642111 000000 0
Q ss_pred hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCcccccCC
Q 014769 284 DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLEDI 360 (419)
Q Consensus 284 ~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~ 360 (419)
......++++...+.++..+++.. .+++++.+++++++++.+.+.|+++|++.++ .|.+ +.++++.++.
T Consensus 227 ~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~------ 298 (382)
T 4eb5_A 227 ENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY------ 298 (382)
T ss_dssp GGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT------
T ss_pred cccccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCcccCCCCEEEEEeCC------
Confidence 001123455666666666666543 2457888899999999999999988777633 4431 4456777652
Q ss_pred CCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 361 NDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 361 ~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+..++...| .++||.+.+|..|.. .+++||+++ .+++++++++++|+++++++.+
T Consensus 299 ~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~~ 375 (382)
T 4eb5_A 299 IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp SCHHHHHHHH-HHHTCBCBCCCGGGTSSCCCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHH-HHCCEEEeccccccCCCCcccHHHHHcCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 2466777777 567999999876432 479999996 5899999999999999987754
No 102
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=100.00 E-value=9.4e-33 Score=263.82 Aligned_cols=332 Identities=12% Similarity=0.093 Sum_probs=243.3
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--C----CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--F----NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--~----~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
+|+.++||+.+++ ..++.+|.+.+++.+++.... . ..|+......++++++++++ +. +..+++
T Consensus 57 ~g~~~ld~~s~~~---l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~------g~--~~~i~~ 125 (409)
T 3kki_A 57 ASPDDIILQSNDY---LALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFT------GF--DECLLS 125 (409)
T ss_dssp CCTTSEECCCSCT---TCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHH------TC--SEEEEE
T ss_pred CCCceEEeeccCc---cCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHh------CC--CeEEEe
Confidence 3677899988764 245678999999999987621 1 12333345678999999887 22 234555
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCc
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNP 192 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~np 192 (419)
+++++++..++.+++++||.|++++|+|..+...+...|.+++.++. .|++++++++.+ +++++++++|+||
T Consensus 126 ~sGt~a~~~~l~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~~~~-------~d~~~le~~l~~~~~~~vi~~~~~np 198 (409)
T 3kki_A 126 QSGWNANVGLLQTICQPNTNVYIDFFAHMSLWEGARYANAQAHPFMH-------NNCDHLRMLIQRHGPGIIVVDSIYST 198 (409)
T ss_dssp SCHHHHHHHHHHHHCCTTCEEEEETTSCHHHHHHHHHTTCEEEEECT-------TCHHHHHHHHHHHCSCEEEEESBCTT
T ss_pred cchHHHHHHHHHHhcCCCCEEEECCCcCHHHHHHHHHcCCeEEEecC-------CCHHHHHHHHHhcCCeEEEECCCCCC
Confidence 66679999999999999999999999999998889999999887753 478999998875 5789999999999
Q ss_pred cccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC-CCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 193 CGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS-IVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 193 tG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~-~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
||.+.+ +++|.++|+++|+++|+||+|+.+.++..+.......+. .+..+++.|+||.++++| ||+++++
T Consensus 199 tG~~~~---l~~l~~la~~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~g---g~v~~~~--- 269 (409)
T 3kki_A 199 LGTIAP---LAELVNISKEFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYRA---GAIWCNN--- 269 (409)
T ss_dssp TCCBCC---HHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSSC---EEEEESS---
T ss_pred CCCcCC---HHHHHHHHHHcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCCc---eEEEECH---
Confidence 999999 999999999999999999999985553222111111121 123488999999987664 9998865
Q ss_pred ccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE
Q 014769 272 IFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT 348 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~ 348 (419)
++++.+.... ......++..+.++.+.++.. +..++.+++++++++.+.+.|+++ ++. + . ..++++
T Consensus 270 -----~~~~~~~~~~~~~~~~~~~~~~~~aa~~aal~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~-~-~-~~~~~~ 338 (409)
T 3kki_A 270 -----EVNRCVPFISYPAIFSSTLLPYEAAGLETTLEII--ESADNRRQHLDRMARKLRIGLSQL-GLT-I-R-SESQII 338 (409)
T ss_dssp -----SGGGTHHHHCHHHHHSBCCCHHHHHHHHHHHHHH--HHCHHHHHHHHHHHHHHHHHHHTT-TCC-C-C-CSSSEE
T ss_pred -----HHHHHHHHhCcCccccCCCcHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCc-c-C-CCCCEE
Confidence 2344443321 123345666666666666542 223677888999999999999988 666 3 2 467788
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC---CCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---KNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
|+.++.. .+..++...|++ +||.+.|+..+.. .+++|++++ .+++++++++++|++++++.
T Consensus 339 ~~~~~~~-----~~~~~~~~~L~~-~Gv~v~~~~~~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 339 GLETGDE-----RNTEKVRDYLES-NGVFGSVFCRPATSKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp EEEEESH-----HHHHHHHHHHHH-TTEECEEECTTSSCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred EEEeCCH-----HHHHHHHHHHHH-CCceEeeeCCCCcCCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 8877632 124567777755 5999988665432 479999995 58999999999999998763
No 103
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=100.00 E-value=1.1e-32 Score=262.15 Aligned_cols=320 Identities=12% Similarity=0.039 Sum_probs=237.3
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC--------
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP-------- 130 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~-------- 130 (419)
++++.+.+++.+.+..... .|....+..++++.+++++.+.+| .++++|++|+|+++++..++.++..+
T Consensus 41 ~~~~~v~~a~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~--~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~ 117 (397)
T 3f9t_A 41 NVLPITRKIVDIFLETNLG-DPGLFKGTKLLEEKAVALLGSLLN--NKDAYGHIVSGGTEANLMALRCIKNIWREKRRKG 117 (397)
T ss_dssp CCCTHHHHHHHHHTTCCTT-SGGGBHHHHHHHHHHHHHHHHHTT--CTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCcHHHHHHHHHHHhhcCC-CcccChhHHHHHHHHHHHHHHHhC--CCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhc
Confidence 4567889999888765321 222222445666666666666555 46789999999999999999998766
Q ss_pred -----CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHH
Q 014769 131 -----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQE 204 (419)
Q Consensus 131 -----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~ 204 (419)
||+|+++.|+|+++...++..|.+++.+++++ ++.+|++.+++++++ +++++++++|+||||.+.+ +++
T Consensus 118 ~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~ 192 (397)
T 3f9t_A 118 LSKNEHPKIIVPITAHFSFEKGREMMDLEYIYAPIKE--DYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDN---IEE 192 (397)
T ss_dssp CCCCSSCEEEEETTCCTHHHHHHHHHTCEEEEECBCT--TSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCC---HHH
T ss_pred ccCCCCeEEEECCcchhHHHHHHHHcCceeEEEeeCC--CCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCC---HHH
Confidence 99999999999999999999999999998754 467899999999988 8999999999999999998 889
Q ss_pred HHHHHHhCCCeEEEcccccccccCCCCC--------CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 205 IAEMARKLRVMVVADEVYGHLTFGSIPY--------TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 205 i~~~~~~~~~~li~De~~~~~~~~~~~~--------~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
|.++|+++|+++|+|++|+.+.++.... .++ .+.. +..+++.|++|. +.+|.|+|+++++++.
T Consensus 193 i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~s~~K~-~~~~~~~g~~~~~~~~------ 263 (397)
T 3f9t_A 193 LSKIAKENNIYIHVDAAFGGLVIPFLDDKYKKKGVNYKF-DFSL-GVDSITIDPHKM-GHCPIPSGGILFKDIG------ 263 (397)
T ss_dssp HHHHHHHHTCEEEEECTTGGGTGGGCCGGGCCTTCCCCC-SGGG-TCSEEECCTTTT-TCCCSSCEEEEESSGG------
T ss_pred HHHHHHHhCCeEEEEccccchhhhhcccccccccccccc-cccc-cCCeEEEccccc-cCCCCCceEEEEeCHH------
Confidence 9999999999999999998765421110 011 1111 334788899997 5678899999987632
Q ss_pred hHHHHHHhhhcc------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 277 GIIDSIKDCLSI------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 277 ~~~~~l~~~~~~------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+.+.++....+ ..+.+..++.++...+. ...+++..++++++++.+.+.|+++ ++..+ .+..
T Consensus 264 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~ 337 (397)
T 3f9t_A 264 -YKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRYLG---REGQRKIVNECMENTLYLYKKLKEN-NFKPV-IEPI 337 (397)
T ss_dssp -GGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SCCS
T ss_pred -HHHhhccCCccccCCCccccccccccchHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHHC-CCEEE-cCCC
Confidence 22222211111 01124445555555553 4667888888999999999999988 77744 4445
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~ 413 (419)
+.++++.++ +..++...| .++||.+.++.. ++++|++++ .+++++++++++|+++++
T Consensus 338 ~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~~~~---~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 338 LNIVAIEDE--------DYKEVCKKL-RDRGIYVSVCNC---VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp SSEEEEECT--------THHHHHHHH-HHTTCBCEECSS---SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred ccEEEEEeC--------CHHHHHHHH-HhCCeEEeccCC---CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 556677765 356676666 556999999864 589999996 589999999999998764
No 104
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=100.00 E-value=2.9e-33 Score=264.91 Aligned_cols=319 Identities=15% Similarity=0.136 Sum_probs=237.9
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC--CcEEEcccHHHHHHHHHHHhcCCCCeEE
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA--DDVYVTLGCKQAVEVILSVLARPGANVL 135 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t~g~~~al~~~~~~l~~~gd~vl 135 (419)
.++++.+.+++.+.+.... .+.......++++.+++++ +.++ ++|++|+|+++++. ++..+.++||+|+
T Consensus 11 ~~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~la~~~------~~~~~~~~v~~~~g~t~al~-~~~~~~~~gd~vi 81 (384)
T 3zrp_A 11 TTIKEDVLVAGLENNVGFT--SKEFVEALAYSLKGLRYVM------GASKNYQPLIIPGGGTSAME-SVTSLLKPNDKIL 81 (384)
T ss_dssp SCCCHHHHHHTTCCSCCTT--SHHHHHHHHHHHHHHHHHH------TCCTTSEEEEEESCHHHHHH-HGGGGCCTTCEEE
T ss_pred CCCCHHHHHHhhccccccc--cHHHHHHHHHHHHHHHHHh------CCCCCCcEEEEcCCcHHHHH-HHHhhcCCCCEEE
Confidence 4567888877765543211 1111234567777888777 4455 88999999999999 9999999999999
Q ss_pred eeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 136 LPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 136 v~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
+++|+|++ +...+...|.+++.++++. ++.+|++.+++++++ +++++++++|+||||.++| +++|.++|+++
T Consensus 82 ~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~ 156 (384)
T 3zrp_A 82 VVSNGVFGDRWEQIFKRYPVNVKVLRPSP--GDYVKPGEVEEEVRKSEYKLVALTHVETSTGVREP---VKDVINKIRKY 156 (384)
T ss_dssp EECSSHHHHHHHHHHTTSSCEEEEECCST--TCCCCHHHHHHHHHHSCEEEEEEESEETTTTEECC---HHHHHHHHGGG
T ss_pred EecCCcchHHHHHHHHHcCCcEEEecCCC--CCCCCHHHHHHHHHhCCCcEEEEeCCCCCCceECc---HHHHHHHHHhc
Confidence 99999965 5566677899999998764 456899999999987 7899999999999999999 88999999999
Q ss_pred CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH----------
Q 014769 213 RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI---------- 282 (419)
Q Consensus 213 ~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l---------- 282 (419)
|+++|+|++|+.... ...+..+ +..+++.|+||+++ ++.++||+++++ ++++.+
T Consensus 157 ~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~~~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~~ 220 (384)
T 3zrp_A 157 VELIVVDGVSSVGAE----EVKAEEW---NVDVYLTASQKALG-SAAGLGLLLLSP--------KALSILDSQNSIAGYY 220 (384)
T ss_dssp EEEEEEECTTTTTTS----CCCTTTT---TCSEEEEETTSTTC-CCSSEEEEEECH--------HHHHHHHHCCCSCCST
T ss_pred CCEEEEECcccccCc----ccccccc---CCCEEEecCccccc-CCCceEEEEECH--------HHHHHhcCCCCCCccc
Confidence 999999999985322 1122222 24488999999863 234499999865 455554
Q ss_pred ---Hhhh----------ccc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----c
Q 014769 283 ---KDCL----------SIY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----G 344 (419)
Q Consensus 283 ---~~~~----------~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~ 344 (419)
.... ... ++++...+.++..+++......+++..++++++++.+.+.|+++ ++.++ .+. .
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~ 298 (384)
T 3zrp_A 221 LDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIKRHTMVASAIRAGLEAL-GLEIV-ARRPESYS 298 (384)
T ss_dssp TCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-CSSGGGBC
T ss_pred ccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCeEc-cCcccccC
Confidence 1111 111 25566666666666664333447888899999999999999988 77733 454 4
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++++++.++. .+..++...|. ++||.+.+|..+.. +++|+++. .+++++++++++|+++++++.
T Consensus 299 ~~~~~~~~~~------~~~~~~~~~l~-~~gi~v~~g~~~~~-~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~~ 364 (384)
T 3zrp_A 299 NTVTGVILKV------ADPQKVLAGTV-NEGVEFAPGVHPAF-KYFRIGHMGWVTPNDAIIAISVIERTLRKLG 364 (384)
T ss_dssp SSEEEEECSS------SCHHHHHHHHH-TTTCCCEECCCTTC-CEEEEECCSSCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccEEEEECCC------CCHHHHHHHHH-HCCEEEecCCCCCc-CEEEEeccccCCHHHHHHHHHHHHHHHHHcC
Confidence 6777888864 25677877775 55999999874433 89999985 689999999999999998764
No 105
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=100.00 E-value=2.7e-33 Score=265.97 Aligned_cols=323 Identities=15% Similarity=0.056 Sum_probs=241.0
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCC-cEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSAD-DVYVTLGCKQAVEVILSVLARPGANV 134 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~-~i~~t~g~~~al~~~~~~l~~~gd~v 134 (419)
.++++.+.+++.+.+. ..|.+ .....++++.+++++ +.+.. +|++|+|+++++..+++++.++||+|
T Consensus 32 ~~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~------~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~v 101 (393)
T 3kgw_A 32 SNLAPRVLAAGSLRMI----GHMQKEMLQIMEEIKQGIQYVF------QTRNPLTLVVSGSGHCAMETALFNLLEPGDSF 101 (393)
T ss_dssp CCCCHHHHHHTTCCCC----CTTSHHHHHHHHHHHHHHHHHH------TCCCSEEEEESCCTTTHHHHHHHHHCCTTCEE
T ss_pred CCCCHHHHHHhccccc----CcccHHHHHHHHHHHHHHHHHh------CCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEE
Confidence 3567888777755321 12222 123456677777776 33333 69999999999999999999999999
Q ss_pred EeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 135 LLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 135 lv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
+++.++|++ +...+...|.+++.++++. ++.+|++++++++++ ++++|++++|+||||.+++ +++|.++|++
T Consensus 102 l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~ 176 (393)
T 3kgw_A 102 LTGTNGIWGMRAAEIADRIGARVHQMIKKP--GEHYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQP---LDGFGELCHR 176 (393)
T ss_dssp EEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECC---CTTHHHHHHH
T ss_pred EEEeCCchhHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHhhCCCcEEEEeccCCcchhhcc---HHHHHHHHHH
Confidence 999988863 3567778899999998754 346899999999987 8999999999999999999 8899999999
Q ss_pred CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc----
Q 014769 212 LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS---- 287 (419)
Q Consensus 212 ~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~---- 287 (419)
+|+++|+|++|+... ....+.. .+..+++.|+||+++ ++.++||+++++ ++++.+.....
T Consensus 177 ~~~~li~De~~~~g~----~~~~~~~---~~~d~~~~s~sK~~~-~~~g~g~~~~~~--------~~~~~~~~~~~~~~~ 240 (393)
T 3kgw_A 177 YQCLLLVDSVASLGG----VPIYMDQ---QGIDIMYSSSQKVLN-APPGISLISFND--------KAKYKVYSRKTKPVS 240 (393)
T ss_dssp TTCEEEEECTTTTTT----SCCCTTT---TTCCEEEEESSSTTC-CCSSCEEEEECH--------HHHHHHHTCSSCCSC
T ss_pred cCCEEEEECCccccC----cccchhh---cCCCEEEecCccccc-CCCceeEEEECH--------HHHHHHhccCCCCCc
Confidence 999999999998421 1111222 223478889999753 233489999865 56776654211
Q ss_pred --------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----
Q 014769 288 --------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE---- 343 (419)
Q Consensus 288 --------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~---- 343 (419)
..++++...+.++..+++.....++++..++++++++.+.+.|+++ ++.++ .+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~ 318 (393)
T 3kgw_A 241 FYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWRRHREATAHLHKHLQEM-GLKFF-VKDPEIR 318 (393)
T ss_dssp STTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBS-SSSGGGB
T ss_pred eeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCeec-cCChhhc
Confidence 1245567777777677765334457888999999999999999988 77633 332
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHhcc
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
.++++++.++.. .+..++...|++++||.+.+|..+..++++|+++ + .+++++++++++|+++++++.+.
T Consensus 319 ~~~~~~~~~~~~-----~~~~~~~~~l~~~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~~~~ 391 (393)
T 3kgw_A 319 LPTITTVTVPAG-----YNWRDIVSYVLDHFSIEISGGLGPTEERVLRIGLLGYNATTENVDRVAEALREALQHCPKN 391 (393)
T ss_dssp CSSEEEEECCTT-----BCHHHHHHHHHHHHCEECBCCCGGGTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHSCBC
T ss_pred CCeEEEEeCCCC-----CCHHHHHHHHHHhCCEEEeCCcccCCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhhhhc
Confidence 256777777642 2567888888776699999998777789999998 6 38999999999999999987654
No 106
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=100.00 E-value=5.7e-33 Score=265.47 Aligned_cols=332 Identities=12% Similarity=0.051 Sum_probs=246.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCc-EEEcccHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADD-VYVTLGCK 117 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~-i~~t~g~~ 117 (419)
.+..+.|+-|- .++++.+.+++.+.+ ...|.+ .....++++.+++++ +.+.++ +++++|++
T Consensus 11 ~~~~~~~~pgp------~~~~~~v~~a~~~~~----~~~~~~~~~~~~~~~~~~la~~~------~~~~~~~v~~~~sgt 74 (411)
T 3nnk_A 11 PPSRLLMGPGP------INADPRVLRAMSSQL----IGQYDPAMTHYMNEVMALYRGVF------RTENRWTMLVDGTSR 74 (411)
T ss_dssp CCCCEEESSSC------CCCCHHHHHHHTSCC----CCTTCHHHHHHHHHHHHHHHHHH------TCCCSEEEEEESCHH
T ss_pred CccceeecCCC------CCCCHHHHHHhhccc----cccccHHHHHHHHHHHHHHHHHh------CCCCCcEEEECCCcH
Confidence 44455666552 356788877775432 222322 122356666666666 344554 78899999
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccc
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCG 194 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG 194 (419)
+++..++.++.++||+|+++.|+|++ +...++..|.+++.++++ .++.+|++++++++++ ++++|++++|+||||
T Consensus 75 ~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG 152 (411)
T 3nnk_A 75 AGIEAILVSAIRPGDKVLVPVFGRFGHLLCEIARRCRAEVHTIEVP--WGEVFTPDQVEDAVKRIRPRLLLTVQGDTSTT 152 (411)
T ss_dssp HHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCHHHHHHHHHHHCCSEEEEESEETTTT
T ss_pred HHHHHHHHHhcCCCCEEEEecCCchHHHHHHHHHHcCCeEEEEecC--CCCCCCHHHHHHHHhhCCCeEEEEeCCCCCcc
Confidence 99999999999999999999999987 788888999999999874 3457899999999986 899999999999999
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~ 274 (419)
.+.+ +++|.++|+++|+++|+|++++... ....+... +..+++.|+||++ .++.++||+++++
T Consensus 153 ~~~~---l~~i~~l~~~~~~~li~Dea~~~~~----~~~~~~~~---~~d~~~~s~~K~l-~~~~g~g~~~~~~------ 215 (411)
T 3nnk_A 153 MLQP---LAELGEICRRYDALFYTDATASLGG----NPLETDVW---GLDAVSAGMQKCL-GGPSGTSPITLSA------ 215 (411)
T ss_dssp EECC---CTTHHHHHHHHTCEEEEECTTTBTT----BCCCTTTT---TCSEEECCSTTTT-CCCSSEEEEEECH------
T ss_pred eecc---HHHHHHHHHHcCCEEEEECCcccCC----cccchhcc---CCcEEEecCcccc-CCCCceEEEEECH------
Confidence 9999 8899999999999999999987522 11122222 2348899999973 2334589999865
Q ss_pred hhhHHHHHHhhh-------------------------------------ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 275 KSGIIDSIKDCL-------------------------------------SIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 275 ~~~~~~~l~~~~-------------------------------------~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
++++.++... ...++++...+.++..+++......+++..+
T Consensus 216 --~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~ 293 (411)
T 3nnk_A 216 --RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECARLILQEGLDYGIA 293 (411)
T ss_dssp --HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred --HHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 5666665432 1124556677777767776533333788889
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF 394 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~ 394 (419)
+++++++.+.+.|+++ ++.++ .+.+ +.++++.++.. .+..++...|++++||.+.+|.....++++|+++
T Consensus 294 ~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~~gi~v~~g~~~~~~~~iRi~~ 366 (411)
T 3nnk_A 294 RHKLHGDALVKGIQAM-GLETF-GDLKHKMNNVLGVVIPQG-----INGDQARKLMLEDFGIEIGTSFGPLHGKVWRIGT 366 (411)
T ss_dssp HHHHHHHHHHHHHHHT-TCCBC-SCGGGBCSSEEEEECCTT-----CCHHHHHHHHHHHHSEEEEECCGGGTTTEEEEEC
T ss_pred HHHHHHHHHHHHHHHc-CCEeC-CCcccccccEEEEECCCC-----CCHHHHHHHHHHhcCeEEeCccCCCCCCEEEEeC
Confidence 9999999999999987 77733 4433 67788888632 2567888888777799999986555578999998
Q ss_pred -e--cCHHHHHHHHHHHHHHHHHHh
Q 014769 395 -C--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 395 -~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+ .+++++++++++|+++++++.
T Consensus 367 ~~~~~~~~~i~~~~~~l~~~l~~~~ 391 (411)
T 3nnk_A 367 MGYNARKDCVMTTLSALEAVLNYLK 391 (411)
T ss_dssp CGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred ccCcCCHHHHHHHHHHHHHHHHHcC
Confidence 5 478999999999999998753
No 107
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=100.00 E-value=1e-33 Score=265.27 Aligned_cols=330 Identities=12% Similarity=0.111 Sum_probs=231.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.+.+|+|+.+.+ .++++.+++++.+.+.. ....|++.....++++.+++++ | .+.+|++|+|+++++
T Consensus 6 ~~~~id~~~~~~-----~~~~~~v~~a~~~~~~~-~~~~~~~~~~~~~l~~~la~~~----g---~~~~v~~~~~gt~a~ 72 (356)
T 1v72_A 6 RPPALGFSSDNI-----AGASPEVAQALVKHSSG-QAGPYGTDELTAQVKRKFCEIF----E---RDVEVFLVPTGTAAN 72 (356)
T ss_dssp CCCCCBCSCGGG-----CCCCHHHHHHHHHTTSS-CCCSTTCSHHHHHHHHHHHHHH----T---SCCEEEEESCHHHHH
T ss_pred CCceEeeccCCc-----cCCCHHHHHHHHhhccC-cccccccchHHHHHHHHHHHHh----C---CCCcEEEeCCccHHH
Confidence 567899998853 34678999999887632 1235554444455666666655 3 245699999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHHH--Hhhc--CCEEEEEeccCCCCcccChHHHHH-hhcC-------CccEEEEeC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEGI--AQRK--QVEVRHFDLLPERNWEVDLDAVEA-LADK-------NTAAMVIIN 188 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~~--~~~~--g~~~~~~~~~~~~~~~~~~~~l~~-~~~~-------~~~~v~i~~ 188 (419)
..++.++.++||.|+++.|+|...... +... |.+++.++.+ ++.+|++++++ ++++ ++++|++++
T Consensus 73 ~~al~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~ 149 (356)
T 1v72_A 73 ALCLSAMTPPWGNIYCHPASHINNDECGAPEFFSNGAKLMTVDGP---AAKLDIVRLRERTREKVGDVHTTQPACVSITQ 149 (356)
T ss_dssp HHHHHTSCCTTEEEEECTTSHHHHSSTTHHHHHTTSCEEEECCCG---GGCCCHHHHHHHTTSSTTCTTSCEEEEEEEES
T ss_pred HHHHHHhcCCCCEEEEcCccchhhhhchHHHHHhCCcEEEEecCC---CCeEcHHHHHHHhhhcchhhccCCceEEEEEc
Confidence 999999999999999999998765544 5666 8888887753 36789999999 8875 578889999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
|+| ||.++|.+++++|.++|+++|+++|+|++|..+.. .+.....+ .+..... +++.|+||. +. ...+||+++
T Consensus 150 ~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~-~~~~~~d-~~~~s~sK~-g~-~~G~g~~~~ 224 (356)
T 1v72_A 150 ATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEM-TWKAGVD-ALSFGATKN-GV-LAAEAIVLF 224 (356)
T ss_dssp SCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTT-TGGGTCC-EEEECCGGG-TC-SSCEEEEES
T ss_pred CCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHh-hhhhcCC-EEEEecccC-CC-cCccEEEEE
Confidence 887 99999999999999999999999999999976421 12221111 1111122 345589998 44 223348777
Q ss_pred eCCCCccchhhHHHHHHhhhcccc---CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769 267 NDPNGIFQKSGIIDSIKDCLSIYS---DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~~~~~~---~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 343 (419)
++ ++++.++....... ......+.++...++. +.+.+..++++++++.+.+.|++++++.++ .|.
T Consensus 225 ~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~ 292 (356)
T 1v72_A 225 NT--------SLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTD---DLWLRNARKANAAAQRLAQGLEGLGGVEVL-GGT 292 (356)
T ss_dssp SG--------GGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHHTTCTTEEEE-SCC
T ss_pred CH--------HHHhhHHHHhhccCchhhhHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHHhhCCCcEEc-cCC
Confidence 43 35555543322111 1122222223334432 344556777888899999999887788733 677
Q ss_pred ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 344 GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 344 ~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+++++|++++ .++..+| .++||.+.||. |+ .+++|+++. .+++++++++++|++++++..
T Consensus 293 ~~~~~~~~~~----------~~~~~~l-~~~gi~v~~g~-~~-~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~~~ 354 (356)
T 1v72_A 293 EANILFCRLD----------SAMIDAL-LKAGFGFYHDR-WG-PNVVRFVTSFATTAEDVDHLLNQVRLAADRTQ 354 (356)
T ss_dssp CSSEEEEEEC----------HHHHHHH-HHTTCBCBCSS-SS-TTEEEEECCTTCCHHHHHHHHHHHHHTC----
T ss_pred CccEEEEEcC----------HHHHHHH-HhcCeEEeccc-cC-CCeEEEEecCCCCHHHHHHHHHHHHHHHHhhc
Confidence 8889998774 2566666 56799999987 55 789999984 589999999999999887654
No 108
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=100.00 E-value=1.2e-33 Score=264.38 Aligned_cols=318 Identities=15% Similarity=0.062 Sum_probs=236.4
Q ss_pred CCChHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEe
Q 014769 58 FRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLL 136 (419)
Q Consensus 58 ~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv 136 (419)
.++++.+++++.+.+.. ..|+ ...+..++|+++++++ |...++++|++|+|+++++..++.++.+ |+|++
T Consensus 9 ~~~~~~v~~a~~~~~~~---~~~~~~~~~~~~l~~~la~~~----g~~~~~~~v~~t~g~t~a~~~~~~~~~~--d~vl~ 79 (353)
T 2yrr_A 9 TPIPERVQKALLRPMRG---HLDPEVLRVNRAIQERLAALF----DPGEGALVAALAGSGSLGMEAGLANLDR--GPVLV 79 (353)
T ss_dssp CCCCHHHHGGGGSCCCC---TTCHHHHHHHHHHHHHHHHHH----CCCTTCEEEEESSCHHHHHHHHHHTCSC--CCEEE
T ss_pred CCCCHHHHHHHhccccc---ccCHHHHHHHHHHHHHHHHHh----CCCCCCceEEEcCCcHHHHHHHHHHhcC--CcEEE
Confidence 46678888888766543 1232 2345678888888887 2223478899999999999999999876 89999
Q ss_pred eCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769 137 PRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (419)
Q Consensus 137 ~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (419)
++|+|+++ ...++..|.+++.+++++ ++.+|++.+++.+++ +++++++++|+||||.+++ +++|.++|+++|
T Consensus 80 ~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~ 154 (353)
T 2yrr_A 80 LVNGAFSQRVAEMAALHGLDPEVLDFPP--GEPVDPEAVARALKRRRYRMVALVHGETSTGVLNP---AEAIGALAKEAG 154 (353)
T ss_dssp EECSHHHHHHHHHHHHTTCCEEEEECCT--TSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECC---HHHHHHHHHHHT
T ss_pred EcCCCchHHHHHHHHHcCCceEEEeCCC--CCCCCHHHHHHHHHhCCCCEEEEEccCCCcceecC---HHHHHHHHHHcC
Confidence 99999874 455677899999998754 456899999999887 7899999999999999999 889999999999
Q ss_pred CeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC-CCCCceeEEEEeeCCCCccchhhHHHHHHh--------
Q 014769 214 VMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW-LVPGWRFGWLVTNDPNGIFQKSGIIDSIKD-------- 284 (419)
Q Consensus 214 ~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~-------- 284 (419)
+++|+|++|+... ...++..++ ..+++.|++|++ +.+| +||+++++ ++++.++.
T Consensus 155 ~~li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~~~~~g--~G~~~~~~--------~~~~~l~~~~~~~~~~ 217 (353)
T 2yrr_A 155 ALFFLDAVTTLGM----LPFSMRAMG---VDYAFTGSQKCLSAPPG--LAPIAASL--------EARKAFTGKRGWYLDL 217 (353)
T ss_dssp CEEEEECTTTTTT----SCCCHHHHT---CSEEECCTTSTTCCCSS--CEEEEECH--------HHHHHCCCCSCSTTCH
T ss_pred CeEEEEcCccccc----ccccccccC---ceEEEecCcccccCCCc--eEEEEECH--------HHHHHhccCCCccccH
Confidence 9999999996422 112232232 237788999964 3355 79999875 45554430
Q ss_pred --------hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCc
Q 014769 285 --------CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNP 354 (419)
Q Consensus 285 --------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~ 354 (419)
.....++++...+.++..+++......+++.+++++++++.+.+.|+++ ++.++ .+. ++++++++++.
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~ 295 (353)
T 2yrr_A 218 ARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWVLEELKAR-GFRPY-PKASPLPTVLVVRPPE 295 (353)
T ss_dssp HHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCEES-CSSSBCTTEEEEECCT
T ss_pred HHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHC-CCccc-cCccCCCeEEEEECCC
Confidence 1122345677777777667665323347788899999999999999887 77733 343 56667788753
Q ss_pred ccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHH-HHHHHHHHHHHH
Q 014769 355 WLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALK-DGLGRMKAFCQR 414 (419)
Q Consensus 355 ~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~-~~l~~l~~~~~~ 414 (419)
. .+..++...|. ++||.+.+|..|..++++|+++ . .++++++ +++++|+++++.
T Consensus 296 ~-----~~~~~~~~~l~-~~gi~v~~g~~~~~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 296 G-----VDADRLVRALY-AEGVAVAGGIGPTRGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp T-----CCHHHHHHHHH-HTTEECEECCGGGTTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred C-----CCHHHHHHHHH-HCCEEEeCCccccCCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 1 24677777775 4699999998877788999999 3 5788888 999999988753
No 109
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=100.00 E-value=1.1e-33 Score=271.79 Aligned_cols=347 Identities=13% Similarity=0.064 Sum_probs=238.5
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+..++||+.|.+.....+ .+|.+.+++.+++..... ..|.+..+..+++++|++++. + . .+++|++|+|++
T Consensus 39 ~g~~~id~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~---~-~-~~~~v~~~~g~~ 112 (426)
T 1sff_A 39 EGREYLDFAGGIAVLNTGH-LHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVP---G-D-FAKKTLLVTTGS 112 (426)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHTTTCSCCCTTTEECHHHHHHHHHHHHHSS---C-S-SCEEEEEESSHH
T ss_pred CCCEEEEcccChhhcccCC-CCHHHHHHHHHHHHhCCCccccccCCHHHHHHHHHHHHhCC---c-c-cccEEEEeCchH
Confidence 4777899988864322222 578899999998865322 145556788999999999972 2 1 348999999999
Q ss_pred HHHHHHHH---HhcCCCCeEEeeCCCCCCcHH-HHhhcCCE-------------EEEEeccC---CCCcccChHHHHHhh
Q 014769 118 QAVEVILS---VLARPGANVLLPRPGWPYYEG-IAQRKQVE-------------VRHFDLLP---ERNWEVDLDAVEALA 177 (419)
Q Consensus 118 ~al~~~~~---~l~~~gd~vlv~~p~~~~~~~-~~~~~g~~-------------~~~~~~~~---~~~~~~~~~~l~~~~ 177 (419)
+++..+++ .+.++| .|++++|+|+++.. .+...|.+ +..++++. ..++.+|++.|++++
T Consensus 113 ~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~~l~~~l 191 (426)
T 1sff_A 113 EAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISEDDAIASIHRIF 191 (426)
T ss_dssp HHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCCCSSEEEECCCBGGGTBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCCCCCcEEeCCCccccccchHHHHHHHHHHH
Confidence 99999988 677776 89999999987643 44444432 55666542 113457899999888
Q ss_pred c-----CCccEEEEe-CCCCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769 178 D-----KNTAAMVII-NPGNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (419)
Q Consensus 178 ~-----~~~~~v~i~-~p~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 250 (419)
+ +++++|++. +++| || .+.|.+++++|.++|+++|+++|+||+|+++.+.+... .+...+.. +.+.||
T Consensus 192 ~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~---~di~s~ 266 (426)
T 1sff_A 192 KNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEVQSGAGRTGTLF-AMEQMGVA---PDLTTF 266 (426)
T ss_dssp HHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTSC---CSEEEE
T ss_pred HhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEechhhccCcccchh-hhhhcCCC---CCEEEE
Confidence 6 234444442 3467 99 78899999999999999999999999999876655321 22222221 223489
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
||.++. |+|+||+++++ ++++.+.... ..+++.+++.+.++.++|+.... .+..++++++++.+.+.
T Consensus 267 sK~~~~-GlriG~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~~~ 334 (426)
T 1sff_A 267 AKSIAG-GFPLAGVTGRA--------EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFEQ---ENLLQKANDLGQKLKDG 334 (426)
T ss_dssp CGGGGT-SSCCEEEEEEH--------HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHH
T ss_pred cccccC-CCceEEEEEcH--------HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHH
Confidence 999876 99999999975 4666555322 23456788888888877764221 12344555666666666
Q ss_pred hhc----CCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHH
Q 014769 330 VKE----IPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSA 400 (419)
Q Consensus 330 l~~----~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~ 400 (419)
|++ ++.+. ...+. |+++|++++.... +...+..++...|+ ++||.+.||..+ .+++|++++ .++++
T Consensus 335 l~~~~~~~~~~~-~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~v~~~~~~--~~~iRi~~~~~~~~~~ 409 (426)
T 1sff_A 335 LLAIAEKHPEIG-DVRGL-GAMIAIELFEDGDHNKPDAKLTAEIVARAR-DKGLILLSCGPY--YNVLRILVPLTIEDAQ 409 (426)
T ss_dssp HHHHHHTCTTEE-EEEEE-TTEEEEEEBGGGCTTSBCHHHHHHHHHHHH-HTTEECEEESTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhCCCeE-EEEEE-EEEEEEEEecCccccCCChHHHHHHHHHHH-HCCcEEecCCCC--CCEEEEECCccCCHHH
Confidence 554 33222 11344 7788998842100 00012456777765 579999998764 689999984 68999
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 401 LKDGLGRMKAFCQRH 415 (419)
Q Consensus 401 l~~~l~~l~~~~~~~ 415 (419)
+++++++|+++++++
T Consensus 410 i~~~~~~l~~~l~~~ 424 (426)
T 1sff_A 410 IRQGLEIISQCFDEA 424 (426)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999999875
No 110
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=100.00 E-value=2.1e-32 Score=258.66 Aligned_cols=324 Identities=14% Similarity=0.069 Sum_probs=232.6
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCC---------CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATN---------SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA- 128 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~- 128 (419)
++++.+.+++.+.+.... .++.. ....++++.+++++ ++++++|++|+|+++++..+++++.
T Consensus 11 ~~~~~v~~a~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~la~~~------~~~~~~i~~~~g~~~a~~~~~~~~~~ 82 (382)
T 4hvk_A 11 PVDERILEAMLPYMTESF--GNPSSVHSYGFKAREAVQEAREKVAKLV------NGGGGTVVFTSGATEANNLAIIGYAM 82 (382)
T ss_dssp CCCHHHHHHHHHHHHTSC--CCTTCSSHHHHHHHHHHHHHHHHHHHHT------TCTTEEEEEESSHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhhc--CCCcccchHHHHHHHHHHHHHHHHHHHc------CCCcCeEEEECCchHHHHHHHHHhhh
Confidence 567899999999886521 11111 11236666666665 4567899999999999999999998
Q ss_pred ---CCCCeEEeeCCCCCCcHHHHhh---cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHH
Q 014769 129 ---RPGANVLLPRPGWPYYEGIAQR---KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 129 ---~~gd~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l 202 (419)
++||+|+++.++|+++...+.. .|.+++.++++ .++.+|+++++++++++++++++++|+||||.+.+ +
T Consensus 83 ~~~~~gd~vi~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~ 157 (382)
T 4hvk_A 83 RNARKGKHILVSAVEHMSVINPAKFLQKQGFEVEYIPVG--KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQP---V 157 (382)
T ss_dssp HHGGGCCEEEEETTCCHHHHHHHHHHHHTTCEEEEECBC--TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCC---H
T ss_pred hhcCCCCEEEECCCCcHHHHHHHHHHHhcCCEEEEeccC--CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCC---H
Confidence 8999999999999987665444 59999998875 34578999999999988999999999999999999 8
Q ss_pred HHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH
Q 014769 203 QEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI 282 (419)
Q Consensus 203 ~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l 282 (419)
++|.++|+++|+ +|+|++|+... ....+...+ ..+++.|+||.++.+| +|+++++++..+. ......
T Consensus 158 ~~i~~l~~~~~~-li~D~a~~~~~----~~~~~~~~~---~d~~~~s~~K~~g~~g--~g~~~~~~~~~~~---~~~~~~ 224 (382)
T 4hvk_A 158 EEISEVLAGKAA-LHIDATASVGQ----IEVDVEKIG---ADMLTISSNDIYGPKG--VGALWIRKEAKLQ---PVILGG 224 (382)
T ss_dssp HHHHHHHSSSSE-EEEECTTTBTT----BCCCHHHHT---CSEEEEESGGGTSCTT--CEEEEEETTCCCC---CSSCSS
T ss_pred HHHHHHHHHcCE-EEEEhHHhcCC----CCCCchhcC---CCEEEEeHHHhcCCCc--eEEEEEcCccCcC---cccccC
Confidence 899999999999 99999987522 111222222 3488999999876656 7888776532111 000000
Q ss_pred -HhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCccccc
Q 014769 283 -KDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLE 358 (419)
Q Consensus 283 -~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~ 358 (419)
.......++++...+.++..+++.. .+++++..++++++++.+.+.|+++|++.++ .+.+ +.++++.++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~~---- 298 (382)
T 4hvk_A 225 GQENGLRSGSENVPSIVGFGKAAEIT-AMEWREEAERLRRLRDRIIDNVLKIEESYLN-GHPEKRLPNNVNVRFSY---- 298 (382)
T ss_dssp CTGGGTSCSCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSTTEEEC-SCSSSBCTTEEEEEETT----
T ss_pred CCcCccccCCcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-CCccccCCCEEEEEECC----
Confidence 0001113455666777766666532 3577888999999999999999988887733 3332 2355565542
Q ss_pred CCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 359 DINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 359 ~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+..++...| .++||.+.+|..|.. ++++|++++ .++++++++++.|+++++++.+
T Consensus 299 --~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~~~~ 375 (382)
T 4hvk_A 299 --IEGESIVLSL-DMAGIQASTGSACSSKTLQPSHVLMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIERLRS 375 (382)
T ss_dssp --CCHHHHHHHH-HHTTCBCBCC--------CCCHHHHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHH-HHCCEEEeeCCccCCCCCcchHHHHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2466776666 667999999976653 478999996 4789999999999999988754
No 111
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=3e-33 Score=264.15 Aligned_cols=323 Identities=14% Similarity=0.128 Sum_probs=238.6
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCC--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSG--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
++..++||+.|.|.. .++ +++.+.+++.+.+... ....|+ ..+..++++++++++ ++ +++|++|+|+
T Consensus 26 ~g~~~ld~~~~~~~~--~~g~~~~~v~~a~~~~~~~~~~~~~~y~-~~~~~~l~~~la~~~------g~-~~~v~~~~g~ 95 (375)
T 2eh6_A 26 EGKEYLDFVSGIGVN--SLGHAYPKLTEALKEQVEKLLHVSNLYE-NPWQEELAHKLVKHF------WT-EGKVFFANSG 95 (375)
T ss_dssp TCCEEEESSHHHHTC--TTCBSCHHHHHHHHHHHHHCSCCCTTBC-CHHHHHHHHHHHHTS------SS-CEEEEEESSH
T ss_pred CCCEEEEcCCccccc--ccCCCCHHHHHHHHHHHHhccccCcccC-CHHHHHHHHHHHhhc------CC-CCeEEEeCch
Confidence 477899999997632 244 6889999999887642 123574 356788999999886 34 4899999999
Q ss_pred HHHHHHHHHH---hc---CCC-CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHHHh
Q 014769 117 KQAVEVILSV---LA---RPG-ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 117 ~~al~~~~~~---l~---~~g-d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
++++..++.+ +. ++| |+|++++|+|+++...+...+.. +..++. .|+++|+++
T Consensus 96 t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 168 (375)
T 2eh6_A 96 TESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEPLVPGFSYAKL-------NDIDSVYKL 168 (375)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCCCCCCceeCCC-------chHHHHHHH
Confidence 9999999875 35 678 99999999999876655443322 222221 489999999
Q ss_pred hcCCccEEEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769 177 ADKNTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 177 ~~~~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
+++++++|++++|+||||.+ .+.+++++|.++|+++|+++|+||+|+++...+... .+..++...+++ ||||.++
T Consensus 169 l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~d~~---s~SK~~~ 244 (375)
T 2eh6_A 169 LDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFY-AYQHFNLKPDVI---ALAKGLG 244 (375)
T ss_dssp CCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGGG
T ss_pred hcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcch-hhhhcCCCCCEE---EEccccc
Confidence 98788899998999999998 568999999999999999999999999765443221 233333222333 7889987
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
+|+|+||+++++ ++++.++.. ...+++.+++.+.++.++|+.. .+..++++++++.+.+.|++++
T Consensus 245 -~g~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~l~~~L~~~~ 310 (375)
T 2eh6_A 245 -GGVPIGAILARE--------EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEV-----EKLLPHVREVGNYFKEKLKELG 310 (375)
T ss_dssp -TTSCCEEEEEEH--------HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHTT
T ss_pred -CCCCeEEEEEcH--------HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999875 455555542 1224456778888777777642 1667788888999999998874
Q ss_pred CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
. . . .+..|+++|++++. +..++...|+ ++||.+.|+. .+++|++++ .+++++++++++|++++
T Consensus 311 ~-~-~-~~~~g~~~~~~~~~-------~~~~~~~~l~-~~gi~~~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 375 (375)
T 2eh6_A 311 K-G-K-VKGRGLMLGLELER-------ECKDYVLKAL-EKGLLINCTA----GKVLRFLPPLIIQKEHIDRAISVLREIL 375 (375)
T ss_dssp S-S-E-EEEETTEEEEECSS-------CCHHHHHHHH-HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHC
T ss_pred c-C-C-ceEEEEEEEEEEcC-------cHHHHHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHhC
Confidence 3 3 2 34567888988863 3466777775 5899999863 679999984 68999999999998753
No 112
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=100.00 E-value=2e-32 Score=262.06 Aligned_cols=331 Identities=13% Similarity=0.081 Sum_probs=240.7
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEE-EcccHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVY-VTLGCKQ 118 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~-~t~g~~~ 118 (419)
+..+.|+.|. .++++.+.+++.+ .....|.+ .....++++.+++++ +.++++++ +++|+++
T Consensus 10 ~~~~~~~p~p------~~~~~~v~~a~~~----~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~~~~~~~s~t~ 73 (416)
T 3isl_A 10 PLRTIMTPGP------VEVDPRVLRVMST----PVVGQFDPAFTGIMNETMEMLRELF------QTKNRWAYPIDGTSRA 73 (416)
T ss_dssp CCCEECSSSS------CCCCHHHHHHTTS----CCCCTTSHHHHHHHHHHHHHHHHHT------TCCCSEEEEEESCHHH
T ss_pred ccceeecCCC------cCcCHHHHHHhcc----cCCCCccHHHHHHHHHHHHHHHHHh------CCCCCcEEEecCcHHH
Confidence 4445565542 2456666665543 22223332 123455666666665 34566665 8899999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCcccc
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGN 195 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~ 195 (419)
++..++.++.++||+|++++|+|++ +...++..|.+++.++++. ++.+|+++++++++ +++++|++++|+||||.
T Consensus 74 al~~~~~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~ 151 (416)
T 3isl_A 74 GIEAVLASVIEPEDDVLIPIYGRFGYLLTEIAERYGANVHMLECEW--GTVFDPEDIIREIKKVKPKIVAMVHGETSTGR 151 (416)
T ss_dssp HHHHHHHHHCCTTCEEEEEESSHHHHHHHHHHHHTTCEEEEEECCT--TCCCCHHHHHHHHHHHCCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCCCEEEEecCCcccHHHHHHHHhcCCeeEEEecCC--CCCCCHHHHHHHHhhCCCcEEEEEccCCCCce
Confidence 9999999999999999999999987 6677888999999999764 34689999999997 58899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
+.+ +++|.++|+++|+++|+|++|+.... ...+..+ +..+++.|+||++ ..+.++|++++++
T Consensus 152 ~~~---l~~i~~l~~~~~~~li~D~a~~~~~~----~~~~~~~---~~d~~~~s~~K~l-~g~~g~g~~~~~~------- 213 (416)
T 3isl_A 152 IHP---LKAIGEACRTEDALFIVDAVATIGGC----EVKVDEW---KIDAAIGGTQKCL-SVPSGMAPITYNE------- 213 (416)
T ss_dssp ECC---CHHHHHHHHHTTCEEEEECTTTTTTS----CCCTTTT---TCSEEECCSSSTT-CCCSSEEEEEECH-------
T ss_pred ecC---HHHHHHHHHHcCCEEEEECCccccCC----Ccchhhc---CCCEEEecCcccc-CCCCCeEEEEECH-------
Confidence 999 88999999999999999999875321 1122222 2348899999973 2334589998865
Q ss_pred hhHHHHHHhh--------------------------------------hc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 276 SGIIDSIKDC--------------------------------------LS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 276 ~~~~~~l~~~--------------------------------------~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
++++.+... .. ..++++...+.++..+++......+++..
T Consensus 214 -~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~ 292 (416)
T 3isl_A 214 -RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALREGVRLVLEEGLETRF 292 (416)
T ss_dssp -HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred -HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHH
Confidence 466555421 11 13455677777777777653223378889
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEE
Q 014769 317 DTLRESAEICYDGVKEIPCISCPNKPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIA 393 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~~~~~~~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris 393 (419)
++++++++.+.+.|+++ ++.++ .+.+ +.++++.++.. .+..++...|++++||.+.+|.....++++|++
T Consensus 293 ~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~~~gi~v~~g~~~~~~~~iRi~ 365 (416)
T 3isl_A 293 ERHRHHEAALAAGIKAM-GLRLF-GDDSCKMPVVTCVEIPGG-----IDGESVRDMLLAQFGIEIASSFGPLAGKIWRIG 365 (416)
T ss_dssp HHHHHHHHHHHHHHHHT-TCCBC-SCGGGBCTTEEEEECCTT-----CCHHHHHHHHHHHHCEECBCCCSTTTTTEEEEE
T ss_pred HHHHHHHHHHHHHHHHc-CCEec-cCccccCCcEEEEeCCCC-----CCHHHHHHHHHHhCCEEEecCCCCCCCCEEEEe
Confidence 99999999999999986 77733 4433 56777887632 257788888877679999998866567899999
Q ss_pred e-e-cCH-HHHHHHHHHHHHHHHHHh
Q 014769 394 F-C-AEP-SALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 394 ~-~-~~~-~~l~~~l~~l~~~~~~~~ 416 (419)
+ . .++ +++++++++|+++++++.
T Consensus 366 ~~~~~~~~e~i~~~~~~l~~~~~~~~ 391 (416)
T 3isl_A 366 TMGYSCRKENVLFVLAGLEAVLLRHN 391 (416)
T ss_dssp CCGGGCSHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCCcHHHHHHHHHHHHHHHHHcC
Confidence 9 3 344 449999999999998763
No 113
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=100.00 E-value=7.3e-33 Score=259.76 Aligned_cols=332 Identities=13% Similarity=0.066 Sum_probs=239.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
.+.+|+|+.+.+. ++++.+.+++.+.+. .|....|..++++.+++++.+.+| .++++|++|+|+++++
T Consensus 12 ~p~~i~l~~~~~~-----~~~~~v~~a~~~~~~-----~~~~~~g~~~~~~~~~~~l~~~~g--~~~~~v~~~~g~t~a~ 79 (359)
T 1svv_A 12 KPKPYSFVNDYSV-----GMHPKILDLMARDNM-----TQHAGYGQDSHCAKAARLIGELLE--RPDADVHFISGGTQTN 79 (359)
T ss_dssp ---CEECSCSCSS-----CCCHHHHHHHHHHTT-----CCCCSTTCSHHHHHHHHHHHHHHT--CTTSEEEEESCHHHHH
T ss_pred CCeeEEecCCCcC-----CCCHHHHHHHHHHHh-----hccccccccHHHHHHHHHHHHHhC--CCCccEEEeCCchHHH
Confidence 5568999986532 567899999998874 366666778899999998888766 5678999999999999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCCcHH--HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-------ccEEEEeCCCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPYYEG--IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-------TAAMVIINPGN 191 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-------~~~v~i~~p~n 191 (419)
..++.+++++||+|++++|+|+++.. .+...|.+++.++.+ ++.+|++.|++.++++ +++|++++| |
T Consensus 80 ~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~g~~~~~v~~~---~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ 155 (359)
T 1svv_A 80 LIACSLALRPWEAVIATQLGHISTHETGAIEATGHKVVTAPCP---DGKLRVADIESALHENRSEHMVIPKLVYISNT-T 155 (359)
T ss_dssp HHHHHHHCCTTEEEEEETTSHHHHSSTTHHHHTTCCEEEECCT---TSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-C
T ss_pred HHHHHHHhCCCCEEEEcccchHHHHHHHHHhcCCCeeEEEeCC---CCeecHHHHHHHHHHHHhccCCCceEEEEEcC-C
Confidence 99999999999999999999998776 477889999988863 5789999999988765 788899998 7
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC-CCCcEEEEecCCCcCCCCCceeEEEEeeCCC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG-SIVPVITLGSISKRWLVPGWRFGWLVTNDPN 270 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~-~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~ 270 (419)
|||.++|.+++++|.++|+++|+++|+||+|..+.++..+. ....+. .....+++.|.+|. +.+ ..+|++++++
T Consensus 156 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~-~~~~~~~~~~~d~~~~s~~K~-g~~-~~~g~l~~~~-- 230 (359)
T 1svv_A 156 EVGTQYTKQELEDISASCKEHGLYLFLDGARLASALSSPVN-DLTLADIARLTDMFYIGATKA-GGM-FGEALIILND-- 230 (359)
T ss_dssp TTSCCCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTC-CCCHHHHHHHCSEEEEECTTT-TCS-SCEEEEECSG--
T ss_pred CCceecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCc-chhhhhhhhcCCEEEEecccC-CCC-CceEEEEEcc--
Confidence 99999999999999999999999999999995543322111 111100 00122667789997 443 5589998854
Q ss_pred CccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769 271 GIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV 347 (419)
Q Consensus 271 ~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~ 347 (419)
++++.++.. .......+.....++..+++. ..+++..++++++++.+.+.| +.+++. +..|.++++
T Consensus 231 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~~~~~~~~l~~~L-~~~~~~-~~~~~~~~~ 299 (359)
T 1svv_A 231 ------ALKPNARHLIKQRGALMAKGWLLGIQFEVLMKD---NLFFELGAHSNKMAAILKAGL-EACGIR-LAWPSASNQ 299 (359)
T ss_dssp ------GGCTTHHHHHHHTTCCCTTTHHHHHHHHHHTST---THHHHHHHHHHHHHHHHHHHH-HHTTCC-BSSCCSSSE
T ss_pred ------cHHHHHHHHHhcCCcccccchhhHHHHHHHHhh---hhHHHHHHHHHHHHHHHHHHh-ccCCeE-EccCCccce
Confidence 233333322 111111122222333445543 456778888999999999999 556887 446788889
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+|++++ .++..+|++++||.+.+.. ....+++|++++ .+++++++++++|++++++.
T Consensus 300 ~~~~~~----------~~~~~~l~~~~gi~v~~~~-~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 358 (359)
T 1svv_A 300 LFPILE----------NTMIAELNNDFDMYTVEPL-KDGTCIMRLCTSWATEEKECHRFVEVLKRLVAST 358 (359)
T ss_dssp ECBEEE----------HHHHHHHTTTEECEEEEEE-TTTEEEEEEECCTTCCHHHHHHHHHHHHHC----
T ss_pred EEEEcC----------HHHHHHHHHhcCEEEEecc-cCCCceEEEEccCcCCHHHHHHHHHHHHHHHhcc
Confidence 888663 3677777665599983311 123578999984 68999999999999988654
No 114
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=9.6e-33 Score=263.50 Aligned_cols=326 Identities=11% Similarity=0.078 Sum_probs=241.2
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCC----CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYA----TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~----~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+++.|+.+.+. ++++.+.+++.+.+..... ..|. ...+..++|+++++++ +.++++|++|+|
T Consensus 26 ~~~~ld~~~~~-----~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~g 94 (406)
T 3cai_A 26 GWVHFDAPAGM-----LIPDSVATTVSTAFRRSGASTVGAHPSARRSAAVLDAAREAVADLV------NADPGGVVLGAD 94 (406)
T ss_dssp SCEECBGGGCC-----CCCHHHHHHHHHHHHHCCSSSCSSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEEESC
T ss_pred CeEEEeCCCcC-----CCCHHHHHHHHHHHHhcCCCCCCccHHHHHHHHHHHHHHHHHHHHh------CCCCCeEEEeCC
Confidence 47888877643 5678899999988764211 1232 2345688999999998 567789999999
Q ss_pred HHHHHHHHHHHh---cCCCCeEEeeCCCCCCcHHHHhh----cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC
Q 014769 116 CKQAVEVILSVL---ARPGANVLLPRPGWPYYEGIAQR----KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 116 ~~~al~~~~~~l---~~~gd~vlv~~p~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
+++++..++.++ .++||+|+++.|+|+++...+.. .|.+++.++++++ ++.+|++.|++++++++++|++++
T Consensus 95 ~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~~-~~~~d~~~l~~~l~~~~~~v~~~~ 173 (406)
T 3cai_A 95 RAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDIE-TGELPTWQWESLISKSTRLVAVNS 173 (406)
T ss_dssp HHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCTT-TCCCCGGGHHHHCCTTEEEEEEES
T ss_pred hHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCcc-cCCcCHHHHHHHhCCCceEEEEeC
Confidence 999999999987 78999999999999976554433 6999999987633 457899999999988889999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeE-EEEee
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFG-WLVTN 267 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G-~~~~~ 267 (419)
|+||||.+++ +++|.++|+++|+++|+|++|+... ....+..++ ..+++.|+||.++ ++ +| |++++
T Consensus 174 ~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g~----~~~~~~~~~---~d~~~~s~~K~~g-~~--~G~~~~~~ 240 (406)
T 3cai_A 174 ASGTLGGVTD---LRAMTKLVHDVGALVVVDHSAAAPY----RLLDIRETD---ADVVTVNAHAWGG-PP--IGAMVFRD 240 (406)
T ss_dssp BCTTTCBBCC---CHHHHHHHHHTTCEEEEECTTTTTT----CCCCHHHHC---CSEEEEEGGGGTS-CS--CEEEEESC
T ss_pred CcCCccccCC---HHHHHHHHHHcCCEEEEEcccccCC----CCCCchhcC---CCEEEeehhhhcC-CC--cCeEEEEe
Confidence 9999999999 8899999999999999999998521 112222222 3488899999854 44 89 99886
Q ss_pred CCCCccchhhHHHHHHhhhc---------c-ccCCchHHHHHHHHHHcccch--------------HHHHHHHHHHHHHH
Q 014769 268 DPNGIFQKSGIIDSIKDCLS---------I-YSDIPTFIQGAIPQILEKTKE--------------DFFCKLIDTLRESA 323 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~---------~-~~~~~~~~~~a~~~~l~~~~~--------------~~~~~~~~~~~~~~ 323 (419)
+ ++++.++.... + .++++...+.++..+++.... .++++..+++++++
T Consensus 241 ~--------~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (406)
T 3cai_A 241 P--------SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQSADAYLNRVF 312 (406)
T ss_dssp H--------HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred h--------HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHHHHHHHHHHH
Confidence 4 45555543321 1 244566665555555543211 15778888999999
Q ss_pred HHHHHHhhcCCCCCCCCCCC---ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC------CCCC---CCeEE
Q 014769 324 EICYDGVKEIPCISCPNKPE---GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI------YVGL---KNWLR 391 (419)
Q Consensus 324 ~~l~~~l~~~~~~~~~~~p~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------~~~~---~~~~R 391 (419)
+.+.+.|++++++.++ .|. ++ ++++.++. .+..++...| .++||.+.+|. .|+. .+++|
T Consensus 313 ~~l~~~L~~~~~~~~~-~~~~~~~~-~~~~~~~~------~~~~~~~~~L-~~~gi~v~~g~~~~~~~~~g~~~~~~~iR 383 (406)
T 3cai_A 313 DYLMVSLRSLPLVMLI-GRPEAQIP-VVSFAVHK------VPADRVVQRL-ADNGILAIANTGSRVLDVLGVNDVGGAVT 383 (406)
T ss_dssp HHHHHHHHTCTTEEEC-CCCSSBCS-EEEEEETT------BCHHHHHHHH-HHTTEECEECCSCHHHHHHTTTTTTCCEE
T ss_pred HHHHHHHhcCCCeEEc-CCccccCC-EEEEEECC------cCHHHHHHHH-HHCCcEEecCChHHHHHHcCCCCCCCeEE
Confidence 9999999988777633 443 44 67777753 1466777766 56899999987 3333 47899
Q ss_pred EEeec--CHHHHHHHHHHHHH
Q 014769 392 IAFCA--EPSALKDGLGRMKA 410 (419)
Q Consensus 392 is~~~--~~~~l~~~l~~l~~ 410 (419)
++++. ++++++++++.|++
T Consensus 384 is~~~~~t~e~i~~~~~~l~~ 404 (406)
T 3cai_A 384 VGLAHYSTMAEVDQLVRALAS 404 (406)
T ss_dssp EECCTTCCHHHHHHHHHHHHT
T ss_pred EEeecCCCHHHHHHHHHHHHH
Confidence 99964 78999999999875
No 115
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=100.00 E-value=9e-33 Score=259.79 Aligned_cols=330 Identities=13% Similarity=0.115 Sum_probs=241.4
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC--CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT--NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~--~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
++++|+.| |. +.++.+.+++.+.+. +.|+. ..+..++|+++++++. ...+++++++|+|+++++
T Consensus 4 ~~~~~~~g-p~-----~~~~~v~~a~~~~~~----~~~~~~~~~~~~~l~~~la~~~g----~~~~~~~v~~~~g~t~a~ 69 (366)
T 1m32_A 4 NYLLLTPG-PL-----TTSRTVKEAMLFDSC----TWDDDYNIGVVEQIRQQLTALAT----ASEGYTSVLLQGSGSYAV 69 (366)
T ss_dssp -CEECSSS-SC-----CCCHHHHHTTCCCCC----TTSHHHHTTTHHHHHHHHHHHHC----SSSSEEEEEEESCHHHHH
T ss_pred ccccccCC-Cc-----CCCHHHHHHHhhhhc----CCCHHHHHHHHHHHHHHHHHHhC----CCCcCcEEEEecChHHHH
Confidence 36899999 42 367888888765421 12321 1678999999999983 122335899999999999
Q ss_pred HHHHHHhcCCCCeEEeeC-CCCCC-cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--CccEEEEeCCCCccccC
Q 014769 121 EVILSVLARPGANVLLPR-PGWPY-YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--NTAAMVIINPGNPCGNV 196 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~-p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~v~i~~p~nptG~~ 196 (419)
..++.+++++||+|++++ ++|.. +...+...|.+++.++++. ++.+|++.+++++++ +++++++++|+||||.+
T Consensus 70 ~~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~ 147 (366)
T 1m32_A 70 EAVLGSALGPQDKVLIVSNGAYGARMVEMAGLMGIAHHAYDCGE--VARPDVQAIDAILNADPTISHIAMVHSETTTGML 147 (366)
T ss_dssp HHHHHHSCCTTCCEEEEESSHHHHHHHHHHHHHTCCEEEEECCT--TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEE
T ss_pred HHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHhCCceEEEeCCC--CCCCCHHHHHHHHhcCCCeEEEEEecccCCccee
Confidence 999999999999988876 55543 5566778899999988753 456899999998875 47888999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+| +++|.++|+++|+++|+|++|+.+.. ...+..+ +..+++.|+||+++. +.++||+++++
T Consensus 148 ~~---l~~i~~l~~~~~~~li~Dea~~~~~~----~~~~~~~---~~di~~~s~~K~~~~-~~g~G~~~~~~-------- 208 (366)
T 1m32_A 148 NP---IDEVGALAHRYGKTYIVDAMSSFGGI----PMDIAAL---HIDYLISSANKCIQG-VPGFAFVIARE-------- 208 (366)
T ss_dssp CC---HHHHHHHHHHHTCEEEEECTTTTTTS----CCCTTTT---TCSEEEEESSSTTCC-CSSEEEEEEEH--------
T ss_pred cC---HHHHHHHHHHcCCEEEEECCccccCc----Ccccccc---CccEEEecCcccccC-CCceEEEEECH--------
Confidence 99 88999999999999999999985332 1122222 345889999997532 34579999975
Q ss_pred hHHHHHHhhh------------------c-cccCCchHHHHHHHHHHcccchHH-HHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769 277 GIIDSIKDCL------------------S-IYSDIPTFIQGAIPQILEKTKEDF-FCKLIDTLRESAEICYDGVKEIPCI 336 (419)
Q Consensus 277 ~~~~~l~~~~------------------~-~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~ 336 (419)
++++.++... . ..++++...+.++..+++...... +++.+++++++++.+.+.|+++ ++
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~~-~~ 287 (366)
T 1m32_A 209 QKLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQRYQQNQRSLVAGMRAL-GF 287 (366)
T ss_dssp HHHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHHHHHHHHHHHHHHHHC-CC
Confidence 3444332210 0 024567777777777776532222 6778889999999999999987 77
Q ss_pred CCCCCC---CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769 337 SCPNKP---EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF 411 (419)
Q Consensus 337 ~~~~~p---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 411 (419)
.++ .| .+++++|+.++... ..+..++...|. ++||.+.+|..| ..+++|++++ .+++++++++++|+++
T Consensus 288 ~~~-~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~~~-~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 361 (366)
T 1m32_A 288 NTL-LDDELHSPIITAFYSPEDP---QYRFSEFYRRLK-EQGFVIYPGKVS-QSDCFRIGNIGEVYAADITALLTAIRTA 361 (366)
T ss_dssp CBS-SCGGGBCSSEEEEECCCCT---TCCHHHHHHHHH-HTTEECEECCCS-SSCEEEEECCSSCCHHHHHHHHHHHHHH
T ss_pred eec-cCchhcCceEEEEEcCccC---CCCHHHHHHHHH-HCCEEEECCcCC-CCCEEEEecCCCCCHHHHHHHHHHHHHH
Confidence 633 33 35778898886310 124677777775 569999999876 4689999996 4789999999999988
Q ss_pred HHH
Q 014769 412 CQR 414 (419)
Q Consensus 412 ~~~ 414 (419)
+++
T Consensus 362 ~~~ 364 (366)
T 1m32_A 362 MYW 364 (366)
T ss_dssp CTT
T ss_pred HHh
Confidence 754
No 116
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=100.00 E-value=5.6e-32 Score=254.81 Aligned_cols=331 Identities=14% Similarity=0.075 Sum_probs=228.6
Q ss_pred CC-CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 41 PR-PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~-~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
|. ++||++.|.+ ..++++.+++++. .|..+ ..+++.+++++.+.+|.. +++++++++|++++
T Consensus 26 g~~~v~~~~~~~~----~~~~~~~v~~a~~---------~~~~~---~~~~~~~~~~~a~~~g~~-~~~~~~~~~ggt~a 88 (374)
T 2aeu_A 26 GRDALYDLSGLSG----GFLIDEKDKALLN---------TYIGS---SYFAEKVNEYGLKHLGGD-ENDKCVGFNRTSSA 88 (374)
T ss_dssp CGGGCEECSSCCC----CCCCCHHHHHHHT---------STTHH---HHHHHHHHHHHHHHHTCC-TTEEEEEESSHHHH
T ss_pred CccceeeecccCC----CCCCCHHHHHHHH---------HhcCc---hHHHHHHHHHHHHHhCCC-CcceEEEEcChHHH
Confidence 66 7999999874 3567888888874 12211 355566666665555533 35789999999999
Q ss_pred HHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE-EEEeCCCCcccc
Q 014769 120 VEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA-MVIINPGNPCGN 195 (419)
Q Consensus 120 l~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-v~i~~p~nptG~ 195 (419)
+..++.++ +||+|+++.|+|+++.. .+...|.+++.+ .|++.++++ ++++++ |++++|+||||.
T Consensus 89 ~~~~~~~~--~gd~Vl~~~~~y~~~~~~~~~~~~~g~~~~~v---------~d~~~l~~~-~~~~~~~v~~~~p~nptG~ 156 (374)
T 2aeu_A 89 ILATILAL--KPKKVIHYLPELPGHPSIERSCKIVNAKYFES---------DKVGEILNK-IDKDTLVIITGSTMDLKVI 156 (374)
T ss_dssp HHHHHHHH--CCSEEEEECSSSSCCTHHHHHHHHTTCEEEEE---------SCHHHHHTT-CCTTEEEEEECBCTTSCBC
T ss_pred HHHHHHhC--CCCEEEEecCCCCccHHHHHHHHHcCcEEEEe---------CCHHHHHhc-CCCccEEEEEccCCCCCCC
Confidence 99999988 99999999999887544 567789888776 278888888 777889 889999999997
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
+..++++|.++|+++|+++|+|++|+.+..+.....+...++ ..++++|+||. ++|+|+||+++++
T Consensus 157 --~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~---~di~~~S~sK~--l~g~~~G~~~~~~------- 222 (374)
T 2aeu_A 157 --ELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLG---ADLVVTSTDKL--MEGPRGGLLAGKK------- 222 (374)
T ss_dssp --CHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHT---CSEEEEETTSS--SSSCSCEEEEEEH-------
T ss_pred --CcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccC---CcEEEecCccc--ccCcceEEEEECH-------
Confidence 677899999999999999999999987641000000011222 34888999998 4578999999875
Q ss_pred hhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH----HHHHHHHhhcC---CCCCCCCCCCceEE
Q 014769 276 SGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES----AEICYDGVKEI---PCISCPNKPEGSMV 347 (419)
Q Consensus 276 ~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~----~~~l~~~l~~~---~~~~~~~~p~~g~~ 347 (419)
++++.++.... ...+++++.+.++..+++....+.+++..+..+.. ++.+.+.|..+ +++.+...|.+.++
T Consensus 223 -~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~~~~~~~g~~~ 301 (374)
T 2aeu_A 223 -ELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKELKAIDDNINIVYERTPTGFVI 301 (374)
T ss_dssp -HHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHTTTCTTEEEEEEECSSEEEE
T ss_pred -HHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcceeeCCceEEE
Confidence 57777776543 23456788888888888764322233333222222 45556655553 24442235666666
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEEeec-C--HHHHHHHHHHHHHHHHHHhc
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIAFCA-E--PSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris~~~-~--~~~l~~~l~~l~~~~~~~~~ 417 (419)
.|..++... ...++.+++.++++++||.+.||..|. ..+++||+++. + +.+++++++.|++++++..+
T Consensus 302 ~~~~~~~~~--~~~~~~~~~~~ll~~~gV~v~~g~~~~~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~~~~ 373 (374)
T 2aeu_A 302 KRVYKDDTI--NIKKLIEIGFNLLKNYGIITITVAGMPGASKSLRIDLTSRDAERIDDNYIIKAIVESIKMAFK 373 (374)
T ss_dssp EEEESSHHH--HHHHHHHHHHHHHHHHCEECSTTSSSCSSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHHHTC
T ss_pred Eeecccccc--cccchHHHHHHHHHhCCEEEecCCCCCCCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 665443210 000123366778888999999998763 35799999953 2 23488888888888887654
No 117
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=100.00 E-value=1.2e-32 Score=262.77 Aligned_cols=336 Identities=15% Similarity=0.168 Sum_probs=238.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+|+.++||+.|.+...... .+|.+.+++.+++..... ..|+. ....++++.+++++ + .++|++|+|++
T Consensus 37 ~g~~~lD~~~~~~~~~lg~-~~p~v~~a~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~----~----~~~v~~~~gg~ 106 (406)
T 4adb_A 37 QGKEYIDFAGGIAVNALGH-AHPELREALNEQASKFWHTGNGYTN-EPVLRLAKKLIDAT----F----ADRVFFCNSGA 106 (406)
T ss_dssp TCCEEEESSHHHHTCTTCB-TCHHHHHHHHHHHTTCSCCCTTSCC-HHHHHHHHHHHHHS----S----CSEEEEESSHH
T ss_pred CCCEEEECCCchhhcccCC-CCHHHHHHHHHHHHhcccccCCcCC-HHHHHHHHHHHhhC----C----CCeEEEeCcHH
Confidence 4778999999843322222 578999999998875321 22322 22345555555554 2 45999999999
Q ss_pred HHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCCCCcccChHHHHHh
Q 014769 118 QAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 118 ~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
+++..+++++.. +| |.|++++|+|+++...+...+. ++..++. .|+++|+++
T Consensus 107 ~a~~~al~~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~ 179 (406)
T 4adb_A 107 EANEAALKLARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAY-------NDINSASAL 179 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECT-------TCHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCC-------CcHHHHHHH
Confidence 999999998865 66 9999999999988555444443 2222221 378999999
Q ss_pred hcCCccEEEEeCCCCccccCC--CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769 177 ADKNTAAMVIINPGNPCGNVF--TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW 254 (419)
Q Consensus 177 ~~~~~~~v~i~~p~nptG~~~--~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 254 (419)
+++++++|+++ |+||||.++ +.+++++|.++|+++|+++|+||+|+++.+.+... .+..++...+++ ||||.+
T Consensus 180 l~~~~~~v~~~-p~np~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---t~sK~~ 254 (406)
T 4adb_A 180 IDDSTCAVIVE-PIQGEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELY-AYMHYGVTPDLL---TTAKAL 254 (406)
T ss_dssp CSTTEEEEEEC-SEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGG
T ss_pred hcCCeEEEEEe-CCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhH-HHHhcCCCCCEE---Eechhh
Confidence 98777777777 999999988 99999999999999999999999999876665432 222233333344 679998
Q ss_pred CCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC
Q 014769 255 LVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI 333 (419)
Q Consensus 255 ~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 333 (419)
+ +|+|+||+++++ ++++.+.... ..+++.+++.+.++.++++.... ++..++++++++.+.+.|+++
T Consensus 255 ~-~G~r~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~l~~~ 322 (406)
T 4adb_A 255 G-GGFPVGALLATE--------ECARVMTVGTHGTTYGGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTI 322 (406)
T ss_dssp G-TTSCCEEEEECH--------HHHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHH
T ss_pred c-CCCCeEEEEEcH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHH
Confidence 7 899999999865 5666666543 33567788888888888875322 456667777777777777653
Q ss_pred C-CCCCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHH
Q 014769 334 P-CISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMK 409 (419)
Q Consensus 334 ~-~~~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~ 409 (419)
. .+..+ ..+..|.++++.++... ..+..++...++ ++||.+.|+. .+++|+++ ..+++++++++++|+
T Consensus 323 ~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~l~-~~gi~v~~~~----~~~iRi~~~~~~~~e~i~~~~~~l~ 394 (406)
T 4adb_A 323 NHRYGLFSEVRGLGLLIGCVLNADY---AGQAKQISQEAA-KAGVMVLIAG----GNVVRFAPALNVSEEEVTTGLDRFA 394 (406)
T ss_dssp HHHHCCEEEEEEETTEEEEEECTTT---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHH
T ss_pred HHhCCCceEEEEEEEEEEEEEeCCc---HHHHHHHHHHHH-HCCcEEeecC----CCeEEEECCCCCCHHHHHHHHHHHH
Confidence 1 11101 12334678888886421 014667777775 4699999864 68999975 568999999999999
Q ss_pred HHHHHHhc
Q 014769 410 AFCQRHTK 417 (419)
Q Consensus 410 ~~~~~~~~ 417 (419)
++++++.+
T Consensus 395 ~~l~~~~~ 402 (406)
T 4adb_A 395 AACEHFVS 402 (406)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHHh
Confidence 99988764
No 118
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=100.00 E-value=8.1e-32 Score=254.41 Aligned_cols=330 Identities=12% Similarity=0.092 Sum_probs=232.2
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
....+|+.|. .++++.+.+++.+.+.. .|.+ +..++.+.+.+++.+.+|.+.+.+.+++|+|++++++
T Consensus 18 ~~~~~~~pgp------~~~~~~v~~a~~~~~~~----~~~~--~~~~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~ 85 (376)
T 3f0h_A 18 QGMLNFTVGP------VMSSEEVRAIGAEQVPY----FRTT--EFSSTMLENEKFMLEYAKAPEGSKAVFMTCSSTGSME 85 (376)
T ss_dssp SSCEECSSSS------CCCCHHHHHHHTSCCCC----CSSH--HHHHHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHH
T ss_pred cCceeecCCC------CCCcHHHHHHhcCCCCC----CCCH--HHHHHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHH
Confidence 3456666662 35678888887654421 2222 2335555555555555554433345666999999999
Q ss_pred HHHHHhcCCCCeEEeeCCCCCCcH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 122 VILSVLARPGANVLLPRPGWPYYE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 122 ~~~~~l~~~gd~vlv~~p~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
.++++++++||+|+++.|+|++.. ..+...|.++..++.+ .++.+|++.++++++++++++++++|+||||.++|
T Consensus 86 ~~~~~~~~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~- 162 (376)
T 3f0h_A 86 AVVMNCFTKKDKVLVIDGGSFGHRFVQLCEIHEIPYVALKLE--HGKKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYD- 162 (376)
T ss_dssp HHHHHHCCTTCCEEEEESSHHHHHHHHHHHHTTCCEEEEECC--TTCCCCHHHHHTTTTSCCCEEEEESEETTTTEECC-
T ss_pred HHHHhccCCCCeEEEEeCChhhHHHHHHHHHcCCceEEEeCC--CCCCCCHHHHHHhhccCceEEEEecccCCcceecC-
Confidence 999999999999999999887643 3466778898888875 34679999999988888999999999999999999
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++|.++|+++|+++|+|++|+.+... ..+..++ ..+++.|+||.++ .+| +|++++++ ++
T Consensus 163 --l~~i~~l~~~~~~~li~D~~~~~~~~~----~~~~~~~---~d~~~~s~~K~l~~~~G--~g~~~~~~--------~~ 223 (376)
T 3f0h_A 163 --TMMIGEFCKKNNMFFVCDCVSAFLADP----FNMNECG---ADVMITGSQKVLACPPG--ISVIVLAP--------RG 223 (376)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTTTTSC----CCHHHHT---CSEEEEETTTTTCCCSS--CEEEEECH--------HH
T ss_pred --HHHHHHHHHHcCCEEEEEcCccccCcc----ccccccC---ccEEEecCcccccCCCc--eEEEEECH--------HH
Confidence 999999999999999999999864321 1222222 2388889999986 455 67777764 56
Q ss_pred HHHHHhhh------------------ccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 014769 279 IDSIKDCL------------------SIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCP 339 (419)
Q Consensus 279 ~~~l~~~~------------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 339 (419)
++.+.... ...++++...+.++..+++..... .+++..++++++++.+.+.|+++ ++...
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 302 (376)
T 3f0h_A 224 VERVEKSKVRTMYFDLKDALKNQERGQTPFTPAVGILLQINERLKEIKKHGGADAEVARIASQAADFRAKIKDL-PFELV 302 (376)
T ss_dssp HHHHHTCCCCCSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHTTTS-SEEEC
T ss_pred HHHhhcCCCCceeecHHHHHhhcccCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CCccC
Confidence 66665321 112344444445555555432223 57888889999999999999887 55422
Q ss_pred CCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHH
Q 014769 340 NKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 340 ~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~ 414 (419)
.+. .+++.+ ..+. .+..++...|.+++||.+.+|......+++|+++. .+++++++++++|++++++
T Consensus 303 -~~~~~~~~~~~-~~~~------~~~~~l~~~l~~~~gi~v~~g~~~~~~~~lRis~~~~~t~e~i~~~~~~l~~~l~~ 373 (376)
T 3f0h_A 303 -SESPANGVTSV-HPTT------ANAYDIFLKLKDEYGIWICPNGGEMKDTIFRVGHIGALTHEDNTTLVNAFKDLQKR 373 (376)
T ss_dssp -CSSBBTTEEEE-EESS------SCHHHHHHHHHHHSSEECEECCGGGTTTCEEEECCSSCCHHHHHHHHHHHHHHHHT
T ss_pred -ccccCceEEEE-eCCC------CCHHHHHHHHHHhCCEEEecCccccCCCEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 332 233332 2221 25678888886666999999865445789999994 5899999999999998864
No 119
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=100.00 E-value=4.9e-32 Score=258.69 Aligned_cols=348 Identities=14% Similarity=0.089 Sum_probs=245.2
Q ss_pred hhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCC---CCHH--HHH-----H
Q 014769 23 VTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNS---GIPP--ARR-----A 92 (419)
Q Consensus 23 ~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~---g~~~--lr~-----~ 92 (419)
..+...+.+..+. ..++|+|..|.+. .++.+.+++.+.+.......|+.+. |.+. +++ .
T Consensus 9 ~~i~~~~~~~~~~-----~~~~i~~~~~~~~------~~~~v~~a~~~~~~~~~~~~y~~~~~~~g~~~~~~~e~~ar~~ 77 (407)
T 2dkj_A 9 EALFELIALEEKR-----QREGLELIASENF------VSKQVREAVGSVLTNKYAEGYPGARYYGGCEVIDRVESLAIER 77 (407)
T ss_dssp HHHHHHHHHHHHH-----HHTSEECCTTCCC------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----hhcceeeccCCCC------CCHHHHHHHHhhhhcCcccCCCcccccCCchHHHHHHHHHHHH
Confidence 3455555544332 3578999999732 2789999998887643234565432 5543 333 4
Q ss_pred HHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc---HHHHhhcCC--EEEEEeccCCCCcc
Q 014769 93 IADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY---EGIAQRKQV--EVRHFDLLPERNWE 167 (419)
Q Consensus 93 ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~---~~~~~~~g~--~~~~~~~~~~~~~~ 167 (419)
+++++ +.++++|++++|+ +++..++.++.++||+|++++|+|+.+ ...+...|. ..+.+++++ .++.
T Consensus 78 la~~~------g~~~~~i~~~sGt-~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~ 149 (407)
T 2dkj_A 78 AKALF------GAAWANVQPHSGS-QANMAVYMALMEPGDTLMGMDLAAGGHLTHGSRVNFSGKLYKVVSYGVRP-DTEL 149 (407)
T ss_dssp HHHHH------TCSEEECCCSSHH-HHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHHSEEEEECCCT-TTSS
T ss_pred HHHHh------CCCcceEEecchH-HHHHHHHHHhcCCCCEEEEecccccCccchHHHHHhcCceEEEEecCCCc-ccCc
Confidence 55554 3445556667665 599999999999999999999999887 344455555 333443332 3567
Q ss_pred cChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEE
Q 014769 168 VDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVI 245 (419)
Q Consensus 168 ~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i 245 (419)
+|++.+++++++ +++++++++|+|| ...+ +++|.++|+++|+++|+||+|+. +.+.+.....+ . ...+
T Consensus 150 ~d~~~l~~~l~~~~~~~v~~~~p~~~--~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~---~--~~di 219 (407)
T 2dkj_A 150 IDLEEVRRLALEHRPKVIVAGASAYP--RFWD---FKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPL---P--YAHV 219 (407)
T ss_dssp CCHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCT---T--TCSE
T ss_pred cCHHHHHHHHhhcCCeEEEEeccccC--CCCC---HHHHHHHHHHcCCEEEEEccccccccccCccCCcc---c--cccE
Confidence 999999999874 7889988899998 5666 89999999999999999999997 54444322111 1 1358
Q ss_pred EEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 246 TLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS-I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 246 ~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
++.|+||. ++|.|+||++++++ ++++.++.... . .++++.....++..+++.....++++..+++++++
T Consensus 220 ~~~s~sK~--l~g~~~G~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (407)
T 2dkj_A 220 VTSTTHKT--LRGPRGGLILSNDP-------ELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENA 290 (407)
T ss_dssp EEEESSGG--GCCCSCEEEEESCH-------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHH
T ss_pred EEEecccc--CCCCCceEEEECCH-------HHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 89999996 45888999998731 57777765532 1 23444444445556665432367788899999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC------CCCCeEEEEee--
Q 014769 324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV------GLKNWLRIAFC-- 395 (419)
Q Consensus 324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~------~~~~~~Ris~~-- 395 (419)
+.+.+.|+++ ++.++..+..++++|+.++... .+..++...| .++||.+.+|..| +.++++|++++
T Consensus 291 ~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~~~~~~~~~~~~~~~~iRis~~~~ 364 (407)
T 2dkj_A 291 KRLAEELARR-GYRIVTGGTDNHLFLVDLRPKG----LTGKEAEERL-DAVGITVNKNAIPFDPKPPRVTSGIRIGTPAI 364 (407)
T ss_dssp HHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----CCHHHHHHHH-HHTTEECEECCCTTCSSCTTTCSEEEEECHHH
T ss_pred HHHHHHHHhC-CceeecCCCCceEEEEECcccC----CCHHHHHHHH-HHcCceecCCcCccccccccCCCceeeecccc
Confidence 9999999988 7764422567888999886421 1456666665 7789999998754 23678999994
Q ss_pred ----cCHHHHHHHHHHHHHHHHH
Q 014769 396 ----AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ----~~~~~l~~~l~~l~~~~~~ 414 (419)
.+++++++++++|++++++
T Consensus 365 ~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 365 TTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp HHTTCCGGGHHHHHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHHHHHHHhc
Confidence 6899999999999999877
No 120
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=100.00 E-value=4.8e-32 Score=260.59 Aligned_cols=356 Identities=12% Similarity=0.043 Sum_probs=225.8
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.++||+.|.+..... ..+|.+.+++.+++.... .|....+..+.++++++++.+..+ .+.++|++|+|++++
T Consensus 27 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 101 (430)
T 3i4j_A 27 AGRRYLDGSSGALVANIG-HGRAEVGERMAAQAARLP--FVHGSQFSSDVLEEYAGRLARFVG--LPTFRFWAVSGGSEA 101 (430)
T ss_dssp TSCEEEETTHHHHTCTTC-BCCHHHHHHHHHHHHHCC--CCCTTTCEEHHHHHHHHHHHHHTT--CTTCEEEEESSHHHH
T ss_pred CCCEEEECCCchhccccC-CCCHHHHHHHHHHHHhcc--cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCcHHHH
Confidence 478899999884432211 238899999999886532 344334556677777777776655 456799999999999
Q ss_pred HHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCE---------------EEEEeccCC-CCcccChHHHHH
Q 014769 120 VEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE---------------VRHFDLLPE-RNWEVDLDAVEA 175 (419)
Q Consensus 120 l~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~---------------~~~~~~~~~-~~~~~~~~~l~~ 175 (419)
+..++++++. +++.|++.+|+|+++...+...+.. +..++.+.. .....|++.|++
T Consensus 102 ~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~ 181 (430)
T 3i4j_A 102 TESAVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRA 181 (430)
T ss_dssp HHHHHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHH
Confidence 9999998863 4689999999999876554444332 111221100 001235578888
Q ss_pred hhcC---CccEEEEeCC-CC-cccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc-CCCCcEEEEe
Q 014769 176 LADK---NTAAMVIINP-GN-PCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF-GSIVPVITLG 248 (419)
Q Consensus 176 ~~~~---~~~~v~i~~p-~n-ptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~-~~~~~~i~~~ 248 (419)
+++. +...+++++| +| ++|. +.+.+++++|.++|+++|+++|+||+|.++.+.+.. ..+..+ +...+++
T Consensus 182 ~l~~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~-~~~~~~~~~~~di~--- 257 (430)
T 3i4j_A 182 LLEREGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSP-LALSRWSGVTPDIA--- 257 (430)
T ss_dssp HHHHHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SGGGGTTTCCCSEE---
T ss_pred HHHhcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccch-hhhhhhcCCCCcEE---
Confidence 7763 4456666666 56 7886 678899999999999999999999999988666542 222333 3222333
Q ss_pred cCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHH
Q 014769 249 SISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRE 321 (419)
Q Consensus 249 s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~ 321 (419)
+|||.++ +| +|+||+++++ ++++.+... ...+++.+++++.++.++|+... .+..++.++..+.
T Consensus 258 t~sK~l~-~G~~r~G~~~~~~--------~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~ 328 (430)
T 3i4j_A 258 VLGKGLA-AGYAPLAGLLAAP--------QVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQ 328 (430)
T ss_dssp EECGGGT-TTSSCCEEEEECH--------HHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred EEccccc-CCccccEEEEECH--------HHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 6899986 49 9999999865 688888763 23456788999998888887532 2334444444444
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC----CCCHHHHHHHHHHhcCeEeecCCCCC---CCCeEEEEe
Q 014769 322 SAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED----INDDIEFALKLAKEESVIVTPGIYVG---LKNWLRIAF 394 (419)
Q Consensus 322 ~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~gv~v~~g~~~~---~~~~~Ris~ 394 (419)
.++.+.+.+..+|++. . .+..|.|+++.+....... .....++...++ ++||.+.|+..+. ..+++||++
T Consensus 329 ~~~~l~~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~~~~iRi~~ 405 (430)
T 3i4j_A 329 LLAGLQALQARFPQMM-Q-VRGTGLLLGVVLGDLATGQAFETPGIASRIGAAAL-KRGLITYPGSGAEPNGRGDHLLLGP 405 (430)
T ss_dssp HHHHHHHHHHHCTTEE-E-EEEETTEEEEEEC------------CHHHHHHHHH-HTTEECC-----------CEEEECC
T ss_pred HHHHHHHHHHhCCCeE-E-EEEEEEEEEEEeccccccCCCccHHHHHHHHHHHH-hCCCEEEecccccCCCCCCEEEEEC
Confidence 5555555554555554 2 2333557777765211000 011256666664 6799999984322 257899998
Q ss_pred e--cCHHHHHHHHHHHHHHHHHHh
Q 014769 395 C--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 395 ~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+ .+++++++++++|+++++++.
T Consensus 406 ~~~~t~e~i~~~l~~l~~~l~~~~ 429 (430)
T 3i4j_A 406 PLSITAAEVDGLLALLAGALEDVL 429 (430)
T ss_dssp CTTCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCCHHHHHHHHHHHHHHHHHhh
Confidence 5 689999999999999998764
No 121
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=100.00 E-value=1.4e-32 Score=261.63 Aligned_cols=333 Identities=12% Similarity=0.109 Sum_probs=233.5
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
++..++||+.|....... +.+|.+.+++.+++..... +.. ....++++.+++.+.+..| +++|++|+|++++
T Consensus 38 ~g~~~ld~~~~~~~~~lg-~~~~~v~~a~~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~gg~~a 109 (397)
T 2ord_A 38 KGNAYLDFTSGIAVNVLG-HSHPRLVEAIKDQAEKLIH--CSN-LFWNRPQMELAELLSKNTF----GGKVFFANTGTEA 109 (397)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHHHCSC--CCT-TSEEHHHHHHHHHHHHTTT----SCEEEEESSHHHH
T ss_pred CCCEEEECCccccccccC-CCCHHHHHHHHHHHHhccc--Ccc-ccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 477889998883211112 2578899999998865321 111 0112444455555544333 5799999999999
Q ss_pred HHHHHHHhcC------C-CCeEEeeCCCCCCcH-HHHhhcCCE------------EEEEeccCCCCcccChHHHHHhhcC
Q 014769 120 VEVILSVLAR------P-GANVLLPRPGWPYYE-GIAQRKQVE------------VRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 120 l~~~~~~l~~------~-gd~vlv~~p~~~~~~-~~~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
+..+++++.. + ++.|++++|+|++.. ..+...|.+ +..++. .|++.|++++++
T Consensus 110 ~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~l~~ 182 (397)
T 2ord_A 110 NEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLGSLTATGQPKYQKPFEPLVPGFEYFEF-------NNVEDLRRKMSE 182 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHHHHHHSBCHHHHGGGCSCCTTEEEECT-------TCHHHHHHHCCT
T ss_pred HHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchhhhhccCChhhccccCCCCCCeeEecC-------CCHHHHHHHhhc
Confidence 9999998864 5 478999999997644 356666654 555543 278999999988
Q ss_pred CccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 180 NTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
++++|++++|+||||. +++.+++++|.++|+++|+++|+||+|+++.+.+.. .++..++...+++ ||||.++ +|
T Consensus 183 ~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~-~~~~~~~~~~d~~---s~sK~~~-~G 257 (397)
T 2ord_A 183 DVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQCGMGRTGKL-FAYQKYGVVPDVL---TTAKGLG-GG 257 (397)
T ss_dssp TEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCCCSEE---EECGGGG-TT
T ss_pred CeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccCccc-hhhhhhCCCCCee---eeccccC-CC
Confidence 8899999999999999 999999999999999999999999999977665532 2222233222333 7899987 89
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC-CC
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP-CI 336 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~ 336 (419)
+|+||++++++ ++ .++.. ...+++.+++.+.++.++|+.... ++..++++++++.+.+.|++++ ++
T Consensus 258 ~r~G~~~~~~~--------~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~ 325 (397)
T 2ord_A 258 VPIGAVIVNER--------AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTK---EGFLEEVEEKGNYLMKKLQEMKEEY 325 (397)
T ss_dssp SCCEEEEECST--------TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTS---TTHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCeEEEEEchH--------hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHHhC
Confidence 99999998762 33 33321 223456788888888888865322 3566777788888888776641 22
Q ss_pred CCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 337 SCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 337 ~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
..+ ..+..|.++++.++.. .+..++...|++ +||.+.|+. ++++|+++ ..+++++++++++|+++++
T Consensus 326 ~~~~~~~~~g~~~~~~~~~~-----~~~~~l~~~l~~-~gi~v~~~~----~~~iRis~~~~~~~e~i~~~~~~l~~~l~ 395 (397)
T 2ord_A 326 DVVADVRGMGLMIGIQFREE-----VSNREVATKCFE-NKLLVVPAG----NNTIRFLPPLTVEYGEIDLAVETLKKVLQ 395 (397)
T ss_dssp TTEEEEEEETTEEEEEECTT-----SCHHHHHHHHHH-TTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEeEEEEEEECCh-----HHHHHHHHHHHH-CCCEEccCC----CCEEEEECCcCCCHHHHHHHHHHHHHHHh
Confidence 211 1233466778888641 146777777754 799999973 67999996 4689999999999999876
Q ss_pred H
Q 014769 414 R 414 (419)
Q Consensus 414 ~ 414 (419)
+
T Consensus 396 ~ 396 (397)
T 2ord_A 396 G 396 (397)
T ss_dssp T
T ss_pred h
Confidence 4
No 122
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=100.00 E-value=1e-31 Score=257.26 Aligned_cols=340 Identities=14% Similarity=0.100 Sum_probs=230.7
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.+..++||+.|.+......+.+|.+++++.+++.... .|++..+..+++..+++.+.+..|... +++|++|+|++++
T Consensus 40 ~g~~~lD~~~~~~~~~lG~~~~p~v~~a~~~~~~~~~--~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~gg~ea 116 (419)
T 2eo5_A 40 DGNKYLDFTSGIGVNNLGWPSHPEVIKIGIEQMQKLA--HAAANDFYNIPQLELAKKLVTYSPGNF-QKKVFFSNSGTEA 116 (419)
T ss_dssp TSCEEEESSGGGGTTTTCBSCCHHHHHHHHHHHTTSC--CCSCSCSCCHHHHHHHHHHHHHSSCSS-CEEEEEESSHHHH
T ss_pred CCCEEEEccCChhhhccCCCCCHHHHHHHHHHHhhCc--cccccccCCHHHHHHHHHHHHhCCCCc-CCEEEEeCchHHH
Confidence 4677899998875422112227999999999986542 233222333445555555555555332 7899999999999
Q ss_pred HHHHHHHhcC-CCCeEEeeCCCCCCcHHHHh-hc-------------CCEEEEEeccCCC--Ccc------------cCh
Q 014769 120 VEVILSVLAR-PGANVLLPRPGWPYYEGIAQ-RK-------------QVEVRHFDLLPER--NWE------------VDL 170 (419)
Q Consensus 120 l~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~-~~-------------g~~~~~~~~~~~~--~~~------------~~~ 170 (419)
++.+++++.. +||+|++++|+|+++..... .. ..++..++.+... .++ +|+
T Consensus 117 ~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~ 196 (419)
T 2eo5_A 117 IEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFMPGVIHVPYPNPYRNPWHINGYENPSELVNRVI 196 (419)
T ss_dssp HHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCCTTEEEECCCCSSSCTTCCCTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCCCCCEEECCCccccccccccccccchhhHHHHH
Confidence 9999987654 48999999999986544322 11 1245566653211 011 367
Q ss_pred HHHH-HhhcC----CccEEEEeCCC-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCc
Q 014769 171 DAVE-ALADK----NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVP 243 (419)
Q Consensus 171 ~~l~-~~~~~----~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~ 243 (419)
+.|+ +++++ ....+++++|+ ||||. +.+.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+
T Consensus 197 ~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~DE~~~~~g~~g~~~-~~~~~~~~~d 275 (419)
T 2eo5_A 197 EFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKKYGILLVDDEVQMGLGRTGKLF-AIENFNTVPD 275 (419)
T ss_dssp HHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS
T ss_pred HHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCccCcchh-hHHhcCCCCC
Confidence 8888 87763 23456777885 57896 6789999999999999999999999999876655321 2222222223
Q ss_pred EEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHH
Q 014769 244 VITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRES 322 (419)
Q Consensus 244 ~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 322 (419)
++ ||||.++ +| +|+||+++++ +++ .+......+++.+++++.++.++++.. ++..++++++
T Consensus 276 ~~---t~sK~~~-~G~~riG~~~~~~--------~~~-~~~~~~~~t~~~n~~~~~aa~aal~~~-----~~~~~~~~~~ 337 (419)
T 2eo5_A 276 VI---TLAKALG-GGIMPIGATIFRK--------DLD-FKPGMHSNTFGGNALACAIGSKVIDIV-----KDLLPHVNEI 337 (419)
T ss_dssp EE---EECGGGG-TTTSCCEEEEEEG--------GGC-CC------CCCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
T ss_pred EE---Eeccccc-CCccceEEEEEch--------Hhh-cCCcccCCCCCCCHHHHHHHHHHHHHH-----HHHHHHHHHH
Confidence 33 7999987 49 9999999976 233 331122335677899999988888752 2267888899
Q ss_pred HHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHH
Q 014769 323 AEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSA 400 (419)
Q Consensus 323 ~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~ 400 (419)
++.+.+.|+++ +. . .+..|.|+++++.... .... +...|+ ++||.+.|+. .+++||++ ..++++
T Consensus 338 ~~~l~~~L~~~--~~-~-~~~~g~~~~i~~~~~~----~~~~-~~~~l~-~~Gv~v~~~~----~~~lRis~~~~~t~e~ 403 (419)
T 2eo5_A 338 GKIFAEELQGL--AD-D-VRGIGLAWGLEYNEKK----VRDR-IIGESF-KRGLLLLPAG----RSAIRVIPPLVISEEE 403 (419)
T ss_dssp HHHHHHHHTTS--SS-E-EEEETTEEEEECSCHH----HHHH-HHHHHH-HTTEECEEET----TTEEEECCCTTCCHHH
T ss_pred HHHHHHHHHHh--hh-h-eEeeeEEEEEEEecCc----cHHH-HHHHHH-HCCCEEecCC----CCEEEEECCCCCCHHH
Confidence 99999999876 33 2 2344667788883110 0234 666665 7899999974 57999987 468999
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 401 LKDGLGRMKAFCQRH 415 (419)
Q Consensus 401 l~~~l~~l~~~~~~~ 415 (419)
+++++++|+++++++
T Consensus 404 i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 404 AKQGLDILKKVIKVV 418 (419)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999998763
No 123
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=100.00 E-value=6.7e-31 Score=249.22 Aligned_cols=315 Identities=15% Similarity=0.138 Sum_probs=230.5
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEeeCC
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLPRP 139 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~~p 139 (419)
.+.+++++.+.+..+.+ .|.+..+..++|+++++++. .+ +.|++++| +++++.++.++ .++||+|+++.|
T Consensus 16 ~~~~~~a~~~~l~~~~~-~~~~~~~~~~l~~~la~~~~------~~-~~i~~~sG-t~al~~~l~~l~~~~gd~Vi~~~~ 86 (388)
T 1b9h_A 16 DDAERNGLVRALEQGQW-WRMGGDEVNSFEREFAAHHG------AA-HALAVTNG-THALELALQVMGVGPGTEVIVPAF 86 (388)
T ss_dssp CHHHHHHHHHHHHTSCC-BTTTCSHHHHHHHHHHHHTT------CS-EEEEESCH-HHHHHHHHHHTTCCTTCEEEEESS
T ss_pred CHHHHHHHHHHHHcCCe-eecCCHHHHHHHHHHHHHhC------CC-eEEEeCCH-HHHHHHHHHHcCCCCcCEEEECCC
Confidence 38999999999876543 46666788999999999983 22 56677766 89999999999 889999999999
Q ss_pred CCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 140 GWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 140 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
+|+++...+...|.+++.++++++ ++.+|++.|++++++++++|+ |+||||.+.+ +++|.++|+++|+++|+|
T Consensus 87 ~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~---l~~i~~la~~~~~~li~D 159 (388)
T 1b9h_A 87 TFISSSQAAQRLGAVTVPVDVDAA-TYNLDPEAVAAAVTPRTKVIM---PVHMAGLMAD---MDALAKISADTGVPLLQD 159 (388)
T ss_dssp SCTHHHHHHHHTTCEEEEECBCTT-TCCBCHHHHHHHCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHHTCCBCEE
T ss_pred ccHHHHHHHHHcCCEEEEEecCCC-cCCCCHHHHHHhcCcCceEEE---EeCCccCcCC---HHHHHHHHHHcCCEEEEe
Confidence 999999999999999999998653 468999999999987666555 9999999988 899999999999999999
Q ss_pred cccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhH--HHHHHhhhcc--------
Q 014769 220 EVYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGI--IDSIKDCLSI-------- 288 (419)
Q Consensus 220 e~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~--~~~l~~~~~~-------- 288 (419)
++|+.+ .+.+. .+..++ ++.+.||||..+++|.|+||++++++. + ++.++.....
T Consensus 160 ~a~~~g~~~~~~---~~~~~~----~i~~~S~s~~K~l~g~~~G~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~ 225 (388)
T 1b9h_A 160 AAHAHGARWQGK---RVGELD----SIATFSFQNGKLMTAGEGGAVVFPDGE-------TEKYETAFLRHSCGRPRDDRR 225 (388)
T ss_dssp CTTCTTCEETTE---EGGGSS----SCEEEECCTTSSSCSSSCEEEEECTTC-------HHHHHHHHHHTBTTCCTTCSS
T ss_pred cchhcCCccCCe---eccccc----ceEEEEccCCCcccCCCeEEEEECCHH-------HHHHHHHHHHHhCCCCccCcc
Confidence 999863 33322 122222 377889997666777899999987531 3 4444332210
Q ss_pred --------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-----CCceEEEEeecCcc
Q 014769 289 --------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK-----PEGSMVTMVKLNPW 355 (419)
Q Consensus 289 --------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~-----p~~g~~~~~~~~~~ 355 (419)
+...+.....++... .+++++..++++++++.+.+.|+++|++..... +.+++++|+.++..
T Consensus 226 ~~~~~~g~~~~~~~~~~a~~~~~-----~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (388)
T 1b9h_A 226 YFHKIAGSNMRLNEFSASVLRAQ-----LARLDEQIAVRDERWTLLSRLLGAIDGVVPQGGDVRADRNSHYMAMFRIPGL 300 (388)
T ss_dssp CCCCSCCCBCBCBHHHHHHHHHH-----HTTHHHHHHHHHHHHHHHHHHHHTSTTCEECCCCTTCCBCCCSEEEEECTTC
T ss_pred ceeecccccCCcCHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCccceEEEEEEeCCc
Confidence 111233332222222 234666778888899999999998878763321 35578999998741
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCCCC-----------------------------CCeEEEEee--c-CHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYVGL-----------------------------KNWLRIAFC--A-EPSALKD 403 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-----------------------------~~~~Ris~~--~-~~~~l~~ 403 (419)
. ..+..++...| .++||.+.++..... .+.+||++. . ++++++.
T Consensus 301 ~---~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~~~~~~~t~edi~~ 376 (388)
T 1b9h_A 301 T---EERRNALVDRL-VEAGLPAFAAFRAIYRTDAFWELGAPDESVDAIARRCPNTDAISSDCVWLHHRVLLAGEPELHA 376 (388)
T ss_dssp C---HHHHHHHHHHH-HHTTCCEEECCCCGGGSHHHHHSSCCSSCHHHHHHTCHHHHHHHHHEEEEEGGGGGSCHHHHHH
T ss_pred C---cccHHHHHHHH-HHCCCCcccccCccccChHhHhcCCCcccccccccCCHHHHHHHhCeEEecCCCCCCCHHHHHH
Confidence 0 00345677666 467999988753210 136999994 6 8999999
Q ss_pred HHHHHHHHHHH
Q 014769 404 GLGRMKAFCQR 414 (419)
Q Consensus 404 ~l~~l~~~~~~ 414 (419)
+++.|++++++
T Consensus 377 ~~~~l~~~~~~ 387 (388)
T 1b9h_A 377 TAEIIADAVAR 387 (388)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhh
Confidence 99999998764
No 124
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.7e-31 Score=250.75 Aligned_cols=327 Identities=11% Similarity=0.011 Sum_probs=235.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
++++|+-|. .++++.+.+++.+.+..+....+....+..++.+.+.+.+.+.+|.. ++++|++|+|+++++..
T Consensus 4 ~~~~~~p~p------~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~~-~~~~v~~~~g~t~al~~ 76 (362)
T 3ffr_A 4 NKIYFTPGP------SELYPTVRQHMITALDEKIGVISHRSKKFEEVYKTASDNLKTLLELP-SNYEVLFLASATEIWER 76 (362)
T ss_dssp CCEEECSSS------CCCCTTHHHHHHHHHHTTTTTSCTTSHHHHHHHHHHHHHHHHHTTCC-TTEEEEEESCHHHHHHH
T ss_pred cceeccCCC------cCCCHHHHHHHHHHhcCCccCcCCCCHHHHHHHHHHHHHHHHHhCCC-CCcEEEEeCCchHHHHH
Confidence 467777663 34567888888877766442111122233455666666666656543 56789999999999999
Q ss_pred HHHHhcCCCCeEEeeCCCCCC-cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 123 ILSVLARPGANVLLPRPGWPY-YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 123 ~~~~l~~~gd~vlv~~p~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
++.++.++ +.+++..+.|.. +...++..|.+++.++.+ .++.+|+++++ ++++++++++++|+||||.++|
T Consensus 77 ~~~~l~~~-~~i~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~--- 148 (362)
T 3ffr_A 77 IIQNCVEK-KSFHCVNGSFSKRFYEFAGELGREAYKEEAA--FGKGFYPADIT--VPADAEIICLTHNETSSGVSMP--- 148 (362)
T ss_dssp HHHHHCSS-EEEEEECSHHHHHHHHHHHHTTCEEEEEECC--TTCCCCGGGCC--CCTTCCEEEEESEETTTTEECC---
T ss_pred HHHhccCC-cEEEEcCcHHHHHHHHHHHHhCCCeEEEecC--CCCCCCHHHHh--ccCCccEEEEEcCCCCcceeCC---
Confidence 99999887 445555555542 334667789999998874 34678999988 6778999999999999999999
Q ss_pred HHHHHHHHHhC-CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCCCccchhhHH
Q 014769 202 LQEIAEMARKL-RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPNGIFQKSGII 279 (419)
Q Consensus 202 l~~i~~~~~~~-~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~~~~~~~~~~ 279 (419)
+++|.++|+++ |+++|+|++|+.+... ..+.. ..+++.|+||+++ .+| +|++++++ +++
T Consensus 149 l~~i~~la~~~p~~~li~D~a~~~~~~~----~~~~~-----~d~~~~s~~K~~~~~~G--~g~~~~~~--------~~~ 209 (362)
T 3ffr_A 149 VEDINTFRDKNKDALIFVDAVSSLPYPK----FDWTK-----IDSVFFSVQKCFGLPAG--LGVWILND--------RVI 209 (362)
T ss_dssp HHHHTTSGGGSTTSEEEEECTTTTTSSC----CCTTS-----CSEEEEETTSTTCCCSC--CEEEEEEH--------HHH
T ss_pred HHHHHHHHHhCCCCEEEEecccccCCcc----cChhH-----CcEEEEecccccCCCCc--eEEEEECH--------HHH
Confidence 88899999999 9999999999864321 11111 2378899999987 677 57777765 455
Q ss_pred HHHHhhhc----------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 014769 280 DSIKDCLS----------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCIS 337 (419)
Q Consensus 280 ~~l~~~~~----------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 337 (419)
+.++.... ..++++...+.++..+++......+++..++++++++.+.+.|+++|++.
T Consensus 210 ~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~ 289 (362)
T 3ffr_A 210 EKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTEEKAALINTYIESSKVFS 289 (362)
T ss_dssp HHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCSSEE
T ss_pred HHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccCce
Confidence 55544321 13556777777777777643233478888999999999999999988887
Q ss_pred CCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769 338 CPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAF 411 (419)
Q Consensus 338 ~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~ 411 (419)
.+ .+ ..+.++|+.++. +..++...|.+ +||.+.+|..+..++++|++++ .++++++++++.|+++
T Consensus 290 ~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~-~gi~~~~g~~~~~~~~iRis~~~~~~~e~i~~l~~~l~~~ 360 (362)
T 3ffr_A 290 FG-VEDAKLRSMTTIVANTTM-------LPGEINKILEP-FDMAVGAGYGSKKETQIRIANFPAHSLEQVHKLVQTLKEK 360 (362)
T ss_dssp ES-SSCGGGBCSSEEEEEESS-------CHHHHHHHHGG-GTEEEEECSGGGTTTEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred ec-cCChhhcCCceEEEecCC-------CHHHHHHHHHH-CCeEEecCccccCCCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 33 32 235677777763 46778777755 5999999977666889999995 4889999999999876
Q ss_pred H
Q 014769 412 C 412 (419)
Q Consensus 412 ~ 412 (419)
+
T Consensus 361 ~ 361 (362)
T 3ffr_A 361 I 361 (362)
T ss_dssp T
T ss_pred h
Confidence 4
No 125
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=100.00 E-value=3.5e-32 Score=254.04 Aligned_cols=327 Identities=17% Similarity=0.170 Sum_probs=224.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+..+|+|+.+... .+++.+++++.+.... ...|.+..+..+||+++++++ +. +++++++|+++++
T Consensus 2 ~~~~i~~~~~~~~-----~p~~~~~~a~~~~~~~--~~~y~~~~~~~~l~~~la~~~------g~--~~~~~~~~gt~a~ 66 (347)
T 1jg8_A 2 PHMMIDLRSDTVT-----KPTEEMRKAMAQAEVG--DDVYGEDPTINELERLAAETF------GK--EAALFVPSGTMGN 66 (347)
T ss_dssp ---CEECSCGGGC-----CCCHHHHHHHHTCCCC--CGGGTCCHHHHHHHHHHHHHH------TC--SEEEEESCHHHHH
T ss_pred CceEEEeccccCC-----CCCHHHHHHHhcCCCC--CcccCCChHHHHHHHHHHHHh------CC--ceEEEecCcHHHH
Confidence 3567899999642 2457788887654321 235777678899999999998 22 4678888889999
Q ss_pred HHHHHHhcCCCCeEEeeCCCCCC-cH--HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCC
Q 014769 121 EVILSVLARPGANVLLPRPGWPY-YE--GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGN 191 (419)
Q Consensus 121 ~~~~~~l~~~gd~vlv~~p~~~~-~~--~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~n 191 (419)
..++.++.++||+|++++|+|.. +. ..+...|.+++.+ .+ .++.+|++++++++++ ++++|++++|+|
T Consensus 67 ~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v-~~--~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~n 143 (347)
T 1jg8_A 67 QVSIMAHTQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPV-PG--KNGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHN 143 (347)
T ss_dssp HHHHHHHCCTTCEEEEETTCHHHHSSTTHHHHHTCCEEEEE-CE--ETTEECHHHHHHHSCCSCTTSCCEEEEEEESSBT
T ss_pred HHHHHHhcCCCCEEEEcCcchhhhccccchhhccCeEEEEe-cC--CCCccCHHHHHHHhccccccccCceEEEEecccc
Confidence 99999999999999999999864 32 2567788888877 32 2456899999999875 578899999999
Q ss_pred cc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccccc--cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEE-EEee
Q 014769 192 PC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT--FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGW-LVTN 267 (419)
Q Consensus 192 pt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~--~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~-~~~~ 267 (419)
|| |.++|.+++++|+++|+++|+++|+|++|..+. +.+.....+.. .. + .++.|+||.++++ +|+ ++.+
T Consensus 144 pt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~-~~-d--~~~~s~sK~l~~~---~G~~~~~~ 216 (347)
T 1jg8_A 144 RSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAG-YA-D--SVMFCLSKGLCAP---VGSVVVGD 216 (347)
T ss_dssp TTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHH-TC-S--EEEEESSSTTCCS---SCEEEEEC
T ss_pred ccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhcc-cc-c--EEEEecccccCCC---ceEEEEcC
Confidence 99 999999999999999999999999999875321 11221111111 11 1 3345899987543 675 4443
Q ss_pred CCCCccchhhHHHHHHhhhcc-c--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 268 DPNGIFQKSGIIDSIKDCLSI-Y--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
. ++++.++..... . ...+...+.++...++... +.++ +..++++.+.+.|+++ ++.+...+..
T Consensus 217 ~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~----~~~~~~~~l~~~L~~~-~~~~~~~~~~ 282 (347)
T 1jg8_A 217 R--------DFIERARKARKMLGGGMRQAGVLAAAGIIALTKMV-DRLK----EDHENARFLALKLKEI-GYSVNPEDVK 282 (347)
T ss_dssp H--------HHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSS-TTHH----HHHHHHHHHHHHHHHH-TCBCCGGGCC
T ss_pred H--------HHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHH-HHHH----HHHHHHHHHHHHHHhc-CceeccCCCc
Confidence 2 466666544321 1 2223344444444554321 1122 2234567777777776 6653223455
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.++|++++.. ..+..++..+|. ++||.+.++. .+++|++++ .+++++++++++|+++++++
T Consensus 283 ~~~~~~~~~~~----~~~~~~~~~~l~-~~gi~v~~~~----~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~~ 346 (347)
T 1jg8_A 283 TNMVILRTDNL----KVNAHGFIEALR-NSGVLANAVS----DTEIRLVTHKDVSRNDIEEALNIFEKLFRKF 346 (347)
T ss_dssp SSEEEEECTTS----SSCHHHHHHHHH-HHTEECEEEE----TTEEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEEcccc----cCCHHHHHHHHH-HCCCEEecCC----CCeEEEEeCCCCCHHHHHHHHHHHHHHHHhc
Confidence 66789988631 124678888874 6799998853 578999984 48999999999999998754
No 126
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=100.00 E-value=1.2e-31 Score=254.79 Aligned_cols=327 Identities=17% Similarity=0.124 Sum_probs=236.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-CYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
+++.++||+.+.+..... ..+|.+.+++.+.+...... .+.+..-..++++.+++++ + ++++++++|+++
T Consensus 34 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g--~~~v~~~~~gt~ 104 (392)
T 3ruy_A 34 EGNRYMDLLSAYSAVNQG-HRHPKIINALIDQANRVTLTSRAFHSDQLGPWYEKVAKLT------N--KEMVLPMNTGAE 104 (392)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCSCCCTTSEETTHHHHHHHHHHHH------T--CSEEEEESSHHH
T ss_pred CCCEEEEcCCChhhhccC-CCCHHHHHHHHHHHHhccccccccCCHHHHHHHHHHHHhc------C--CCEEEEeCcHHH
Confidence 477899999885332111 15789999999988653221 1112234567778887776 2 689999999999
Q ss_pred HHHHHHHHhcCC----------CCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCcccChHHHHH
Q 014769 119 AVEVILSVLARP----------GANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEVDLDAVEA 175 (419)
Q Consensus 119 al~~~~~~l~~~----------gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~l~~ 175 (419)
++..++..+..+ +|.|+++.|+|+++...+...+.. +..++. .|++.|++
T Consensus 105 a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~ 177 (392)
T 3ruy_A 105 AVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRGFGPMLPGIIVIPY-------GDLEALKA 177 (392)
T ss_dssp HHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTTCCSCCSSEEEECT-------TCHHHHHH
T ss_pred HHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccccCCCCCCCeeeCc-------ccHHHHHH
Confidence 999999987644 689999999998776555444322 233321 27999999
Q ss_pred hhcCCccEEEEeCCCCccccCCCHHH-HHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcC
Q 014769 176 LADKNTAAMVIINPGNPCGNVFTYHH-LQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRW 254 (419)
Q Consensus 176 ~~~~~~~~v~i~~p~nptG~~~~~~~-l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 254 (419)
++++++++|++++|+||||.+++.++ +++|.++|+++|+++|+||+|+++.+.+... .....+...+++ |+||.+
T Consensus 178 ~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~-~~~~~~~~~d~~---~~SK~l 253 (392)
T 3ruy_A 178 AITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVF-ACDWDNVTPDMY---ILGKAL 253 (392)
T ss_dssp HCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EECGGG
T ss_pred HhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccch-hhhccCCCCCEE---EEchhh
Confidence 99888999999999999999995555 9999999999999999999998876655432 222223222333 678984
Q ss_pred CCCC-ceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 255 LVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 255 ~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
.+| +|+||+++++ ++++.+.... ..+++.+++++.++..+++.. +. ++..++++++++.+.+.|++
T Consensus 254 -~gG~~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~--~~-~~~~~~~~~~~~~l~~~L~~ 321 (392)
T 3ruy_A 254 -GGGVFPISCAAANR--------DILGVFEPGSHGSTFGGNPLACAVSIAALEVL--EE-EKLTERSLQLGEKLVGQLKE 321 (392)
T ss_dssp -GTTTSCCEEEEECH--------HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHH--HH-TTHHHHHHHHHHHHHHHHTT
T ss_pred -hCChhhhEEEEECH--------HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHH--Hh-hhHHHHHHHHHHHHHHHHHH
Confidence 346 9999999865 4666555443 335677889999888888752 12 56778889999999999988
Q ss_pred C--CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHH
Q 014769 333 I--PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRM 408 (419)
Q Consensus 333 ~--~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l 408 (419)
+ +.+. ...+. |.++++.++. +..++...| .++||.+.||. .+++|+++ ..+++++++++++|
T Consensus 322 ~~~~~~~-~~~~~-g~~~~~~~~~-------~~~~l~~~l-~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l 387 (392)
T 3ruy_A 322 IDNPMIT-EVRGK-GLFIGIELNE-------PARPYCEQL-KAAGLLCKETH----ENVIRIAPPLVISEEDLEWAFQKI 387 (392)
T ss_dssp CCCTTEE-EEEEE-TTEEEEEESS-------CSHHHHHHH-HTTTEECCCBT----TTEEEECCCTTCCHHHHHHHHHHH
T ss_pred hcCCCce-EEEee-eeEEEEEEcc-------hHHHHHHHH-HHCCcEEecCC----CCEEEEECCCCCCHHHHHHHHHHH
Confidence 6 2233 22334 4455555653 356777777 47899999875 68999996 46899999999999
Q ss_pred HHHH
Q 014769 409 KAFC 412 (419)
Q Consensus 409 ~~~~ 412 (419)
++++
T Consensus 388 ~~~l 391 (392)
T 3ruy_A 388 KAVL 391 (392)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9876
No 127
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=100.00 E-value=1.9e-31 Score=256.27 Aligned_cols=340 Identities=13% Similarity=0.075 Sum_probs=233.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
.|..++||+.+.+..... ..+|.+.+++.+++..... ..|+. ....++++.+++++ +.++++|++|+|+
T Consensus 41 ~g~~ylD~~~~~~~~~lg-~~~p~v~~a~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~~~~~~v~~~~gg 112 (429)
T 1s0a_A 41 DGRRLVDGMSSWWAAIHG-YNHPQLNAAMKSQIDAMSHVMFGGITH-APAIELCRKLVAMT------PQPLECVFLADSG 112 (429)
T ss_dssp TSCEEEESSTTTTTCTTC-BSCHHHHHHHHHHHHHCSCCCCSSEEC-HHHHHHHHHHHHHS------CTTCCEEEEESSH
T ss_pred CCCEEEEcCccHhhccCC-CCCHHHHHHHHHHHHhcccccccccCC-HHHHHHHHHHHHhC------CCCCCEEEEeCCH
Confidence 467789999887543222 2579999999998865321 13332 22346666666665 4578899999999
Q ss_pred HHHHHHHHHHhc---C----CCCeEEeeCCCCCCcHHHHhhc-C-------------CEEEEEeccC---CCCc-ccChH
Q 014769 117 KQAVEVILSVLA---R----PGANVLLPRPGWPYYEGIAQRK-Q-------------VEVRHFDLLP---ERNW-EVDLD 171 (419)
Q Consensus 117 ~~al~~~~~~l~---~----~gd~vlv~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~---~~~~-~~~~~ 171 (419)
+++++.+++++. + |||+|++.+|+|+++...+... + ..+..++.+. +..+ .+|++
T Consensus 113 tea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 192 (429)
T 1s0a_A 113 SVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSLWKGYLPENLFAPAPQSRMDGEWDERDMV 192 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGGGTTTSCCCEEECCCCSBC-CCCCGGGGH
T ss_pred HHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhcccccCCCCCceEeCCCcccccccchHHHHH
Confidence 999999998753 2 6899999999998764433211 1 1344555431 1123 47899
Q ss_pred HHHHhhcC--CccEEEEeCC--CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769 172 AVEALADK--NTAAMVIINP--GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246 (419)
Q Consensus 172 ~l~~~~~~--~~~~v~i~~p--~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (419)
.|++++++ ....+++++| +||||. ..+.+++++|.++|+++|+++|+||+|.++.+.+... .+...+...+++
T Consensus 193 ~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~g~~g~~~-~~~~~~~~~d~~- 270 (429)
T 1s0a_A 193 GFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIADEIATGFGRTGKLF-ACEHAEIAPDIL- 270 (429)
T ss_dssp HHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE-
T ss_pred HHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeehhhCCcccchHH-HhhhcCCCCCEE-
Confidence 99988863 2344566777 589996 5678999999999999999999999999765544321 222222222333
Q ss_pred EecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 247 LGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 247 ~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
|+||.++ +| +|+||+++++ ++++.+... ...+++++++++.++.++++.... ++..+++
T Consensus 271 --t~sK~l~-~G~~~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~a~~aal~~~~~---~~~~~~~ 336 (429)
T 1s0a_A 271 --CLGKALT-GGTMTLSATLTTR--------EVAETISNGEAGCFMHGPTFMGNPLACAAANASLAILES---GDWQQQV 336 (429)
T ss_dssp --EECGGGG-TSSSCCEEEEECH--------HHHHHHHTSTTSSCSCCCTTTTCHHHHHHHHHHHHHHHT---CHHHHHH
T ss_pred --Eeccccc-CCCccceEEEeCH--------HHHHHhhcCCCcccccCCCCCCCHHHHHHHHHHHHHHHh---CCHHHHH
Confidence 7899976 58 9999999865 577777653 223456788888888888764221 2345667
Q ss_pred HHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769 320 RESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-- 394 (419)
Q Consensus 320 ~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-- 394 (419)
+++++.+.+.|+++ |++. ...+ .|.++|+.++.. .+..++...|+ ++||.+.|+ .+++||++
T Consensus 337 ~~~~~~l~~~L~~l~~~~~~~-~~~~-~g~~~~~~~~~~-----~~~~~l~~~l~-~~Gi~v~~~-----~~~iRis~~~ 403 (429)
T 1s0a_A 337 ADIEVQLREQLAPARDAEMVA-DVRV-LGAIGVVETTHP-----VNMAALQKFFV-EQGVWIRPF-----GKLIYLMPPY 403 (429)
T ss_dssp HHHHHHHHHHHGGGGGCTTEE-EEEE-ETTEEEEEESSC-----BCHHHHHHHHH-HTTEECCCB-----TTEEEECCCT
T ss_pred HHHHHHHHHHHHHHhcCCCEE-EEEE-eeEEEEEEECCc-----ccHHHHHHHHH-HCCCEEecc-----CCEEEEECCC
Confidence 77788888888764 4433 2123 356788887631 24667777775 679999884 37899996
Q ss_pred ecCHHHHHHHHHHHHHHHHHHh
Q 014769 395 CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
..+++++++++++|+++++++.
T Consensus 404 ~~t~e~i~~~~~~l~~~~~~~~ 425 (429)
T 1s0a_A 404 IILPQQLQRLTAAVNRAVQDET 425 (429)
T ss_dssp TCCHHHHHHHHHHHHHHTSSGG
T ss_pred CCCHHHHHHHHHHHHHHHHhhh
Confidence 4689999999999999886654
No 128
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=100.00 E-value=4.7e-31 Score=255.64 Aligned_cols=343 Identities=14% Similarity=0.118 Sum_probs=231.5
Q ss_pred CCCeeeccCCCCC--CCC---CCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEccc
Q 014769 41 PRPVVPLGYGDPT--AFP---CFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLG 115 (419)
Q Consensus 41 ~~~~i~l~~g~~~--~~~---~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g 115 (419)
+.++++|+.|.+- ... ..++++.+.+++. .. ...|.+..+..++|+++++++. .+++++|+|
T Consensus 32 g~~~~~l~~~~~ylD~~~~~~~~~~~~~~~~a~~----~~-~~~y~~~~~~~~l~~~la~~~~--------~~~~~~~~~ 98 (456)
T 2ez2_A 32 GYNTFLLNSKDIYIDLLTDSGTNAMSDKQWAGMM----MG-DEAYAGSENFYHLERTVQELFG--------FKHIVPTHQ 98 (456)
T ss_dssp TTCGGGSCGGGCSEECSCSSSCCCCCHHHHHHHT----TC-CCCSSSCHHHHHHHHHHHHHHC--------CSEEEEESS
T ss_pred CCCcccCCcccceeeeccccCCccCCHHHHHHhh----cc-hhhcccChhHHHHHHHHHHHhC--------CCcEEEeCC
Confidence 5566666666441 100 1234566655554 22 2367777788999999999982 348999999
Q ss_pred HHHHHHHHHHHhcCCCCeEEeeCCCC-CCcHHHHhhcCCEEEEEeccCC----C----CcccChHHHHHhhcCCc----c
Q 014769 116 CKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLPE----R----NWEVDLDAVEALADKNT----A 182 (419)
Q Consensus 116 ~~~al~~~~~~l~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~----~----~~~~~~~~l~~~~~~~~----~ 182 (419)
+++++..++.+++++|| +++.|+| ..+...+...|.+++.+++++. . ++.+|+++|++++++++ +
T Consensus 99 gt~a~~~al~~l~~~gd--i~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~t~~~~~ 176 (456)
T 2ez2_A 99 GRGAENLLSQLAIKPGQ--YVAGNMYFTTTRYHQEKNGAVFVDIVRDEAHDAGLNIAFKGDIDLKKLQKLIDEKGAENIA 176 (456)
T ss_dssp HHHHHHHHHHHHCCTTC--EEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTCCCSCTTCBCHHHHHHHHHHHCGGGEE
T ss_pred cHHHHHHHHHHhCCCCC--EeccccccchhHHHHHHcCCEEEEecccccccccccccccCCCCHHHHHHHHHhcccccee
Confidence 99999999999999999 7889999 6667788889999998887632 2 36789999999887655 7
Q ss_pred EEEEeCCCC-ccccCCCHHHHHHHHHHHHhCCCeEEEcccccc----------cccCCCCCCCcc-ccCCCCcEEEEecC
Q 014769 183 AMVIINPGN-PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH----------LTFGSIPYTPMG-LFGSIVPVITLGSI 250 (419)
Q Consensus 183 ~v~i~~p~n-ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~-~~~~~~~~i~~~s~ 250 (419)
++++++|+| |||.+++.+++++|+++|+++|+++|+||+|+. +.+.+....++. ..+...+++++ |+
T Consensus 177 ~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~-S~ 255 (456)
T 2ez2_A 177 YICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKEQEQGFENKSIAEIVHEMFSYADGCTM-SG 255 (456)
T ss_dssp EEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHSTTCTTSCHHHHHHHHHTTCSEEEE-ET
T ss_pred EEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccccccccCCcchhhhhhhhcccCCEEEE-eC
Confidence 888999998 999999999999999999999999999999986 344443211100 01111234544 78
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc------ccCCchHHHHH-HHHHHcccchHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI------YSDIPTFIQGA-IPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~a-~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
+|. +++| +.||++++++ ++++.++..... ..+.+.....+ +...++... ++..++.+++.
T Consensus 256 kk~-~~~~-~gG~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~a~~~~~~~~----~~~~~~~~~~~ 322 (456)
T 2ez2_A 256 KKD-CLVN-IGGFLCMNDD-------EMFSSAKELVVVYEGMPSYGGLAGRDMEAMAIGLREAMQ----YEYIEHRVKQV 322 (456)
T ss_dssp TTT-TCCS-SCEEEEESCH-------HHHHHHHHHHHHHTCCTTTTTCCHHHHHHHHHHHHHHTC----HHHHHHHHHHH
T ss_pred ccc-CCCC-ceeEEEECCH-------HHHHHHHHHHhhccCcccccCcchhHHHHHHHHHHHHhH----HHHHHHHHHHH
Confidence 887 5566 7899988431 466665543221 11223222222 222222111 23444455666
Q ss_pred HHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHH-----HHHHHHhcCeEeec-CCCC------------C
Q 014769 324 EICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEF-----ALKLAKEESVIVTP-GIYV------------G 385 (419)
Q Consensus 324 ~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~-----~~~ll~~~gv~v~~-g~~~------------~ 385 (419)
+.+.+.|++. ++. +..|.+++++|+.+.... .+ .+..++ ..+|++++||.+.+ |..| .
T Consensus 323 ~~l~~~L~~~-g~~-~~~p~~~~~~~~~~~~~~-~~-~~~~~~~~~~l~~~L~~~~gv~~~~~g~~~~~~~~~~g~~~~~ 398 (456)
T 2ez2_A 323 RYLGDKLKAA-GVP-IVEPVGGHAVFLDARRFC-EH-LTQDEFPAQSLAASIYVETGVRSMERGIISAGRNNVTGEHHRP 398 (456)
T ss_dssp HHHHHHHHHT-TCC-BCSSCCSSEEEEEHHHHT-TT-SCGGGCHHHHHHHHHHHHHSEECEEESHHHHCBCTTTCSBCCC
T ss_pred HHHHHHHhcC-CCc-cccCCCceEEEEEhHHhc-CC-CChhhccHHHHHHHHHHhcCeeeecccccccccCccccccccC
Confidence 7777778775 776 446788999998763100 00 122333 66666788998766 4322 1
Q ss_pred CCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769 386 LKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 386 ~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~ 416 (419)
..+++||+++ .+++++++++++|++++++..
T Consensus 399 ~~~~iRis~~~~~~t~e~i~~~~~~l~~~l~~~~ 432 (456)
T 2ez2_A 399 KLETVRLTIPRRVYTYAHMDVVADGIIKLYQHKE 432 (456)
T ss_dssp SCCEEEEECCTTTCCHHHHHHHHHHHHHHHHTGG
T ss_pred CCCeEEEEeCCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 1378999996 689999999999999987643
No 129
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=100.00 E-value=6.5e-32 Score=256.80 Aligned_cols=337 Identities=14% Similarity=0.095 Sum_probs=231.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+..++||+.|.+... ..+.++.+.+++.+++..... ..| +.....++++.+++++ +.++++|++|+|++
T Consensus 43 ~g~~~ld~~~~~~~~~-~g~~~~~v~~a~~~~~~~~~~~~~~~-~~~~~~~l~~~la~~~------~~~~~~v~~~~gg~ 114 (395)
T 1vef_A 43 EGNEYIDCVGGYGVAN-LGHGNPEVVEAVKRQAETLMAMPQTL-PTPMRGEFYRTLTAIL------PPELNRVFPVNSGT 114 (395)
T ss_dssp TSCEEEESSHHHHTCT-TCBTCHHHHHHHHHHHHHCCCCCTTS-CCHHHHHHHHHHHHTS------CTTEEEEEEESSHH
T ss_pred CCCEEEEccCcccccc-CCCCCHHHHHHHHHHHHhCCCCcccc-CCHHHHHHHHHHHHhc------CCCcCEEEEcCcHH
Confidence 3677899988854221 112688999999998864321 123 2233455555555554 34678999999999
Q ss_pred HHHHHHHHHhc--CCCCeEEeeCCCCCCc-HHHHhhcCCEEEE---EeccCCCC--cccChHHHHHhhcCCccEEEEeCC
Q 014769 118 QAVEVILSVLA--RPGANVLLPRPGWPYY-EGIAQRKQVEVRH---FDLLPERN--WEVDLDAVEALADKNTAAMVIINP 189 (419)
Q Consensus 118 ~al~~~~~~l~--~~gd~vlv~~p~~~~~-~~~~~~~g~~~~~---~~~~~~~~--~~~~~~~l~~~~~~~~~~v~i~~p 189 (419)
+++..+++++. .+||.|++++|+|++. ...+...|.+... .++..+.. ...|++++++++++++++|+++.+
T Consensus 115 ~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~ 194 (395)
T 1vef_A 115 EANEAALKFARAHTGRKKFVAAMRGFSGRTMGSLSVTWEPKYREPFLPLVEPVEFIPYNDVEALKRAVDEETAAVILEPV 194 (395)
T ss_dssp HHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHHTCCCHHHHGGGCSCSSCEEEECTTCHHHHHHHCCTTEEEEEECSE
T ss_pred HHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhhhhhcCCcccccccCCCCCCeeEeCCCcHHHHHHHhccCEEEEEEeCc
Confidence 99999998874 5789999999999764 4455555654110 11110000 014899999999877777665555
Q ss_pred CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 190 GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 190 ~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+||||.+. +.+++++|.++|+++|+++|+||+|+++.+.+... ++...+...+++ ||||.++. |+|+||+++++
T Consensus 195 ~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~-~~~~~~~~~d~~---s~sK~~~~-g~~~G~~~~~~ 269 (395)
T 1vef_A 195 QGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRF-AFEHFGIVPDIL---TLAKALGG-GVPLGVAVMRE 269 (395)
T ss_dssp ETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE---EECGGGGT-TSSCEEEEEEH
T ss_pred cCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchh-HhhhcCCCCCEE---EEcccccC-CCceEEEEehH
Confidence 78999865 78899999999999999999999999755444321 111222222233 78999876 89999999975
Q ss_pred CCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceE
Q 014769 269 PNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSM 346 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~ 346 (419)
++++.++.. ...+++++++.+.++..+++.... .+..++++++++.+.+.|++++. ..+ ..+..|+
T Consensus 270 --------~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~---~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~~g~ 337 (395)
T 1vef_A 270 --------EVARSMPKGGHGTTFGGNPLAMAAGVAAIRYLER---TRLWERAAELGPWFMEKLRAIPS-PKIREVRGMGL 337 (395)
T ss_dssp --------HHHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---HTTHHHHHHHHHHHHHHHHTSCC-TTEEEEEEETT
T ss_pred --------HHHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHhhc-CceEEEEEEEE
Confidence 466655542 123456788888888777765221 34567888888999999988632 211 1234567
Q ss_pred EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 347 VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
++|+.++. +..++...|++++||.+.|+. .+++||+++ .+++++++++++|++++
T Consensus 338 ~~~~~~~~-------~~~~l~~~l~~~~gi~v~~~~----~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 338 MVGLELKE-------KAAPYIARLEKEHRVLALQAG----PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp EEEEEESS-------CSHHHHHHHHHHHCEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEcC-------hHHHHHHHHHHHCCeEEecCC----CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 88888863 256777777647899999863 689999874 68999999999999875
No 130
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=100.00 E-value=8.2e-32 Score=256.52 Aligned_cols=337 Identities=14% Similarity=0.091 Sum_probs=219.1
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC--CC-CCCCC----CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEc
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG--KF-NCYAT----NSGIPPARRAIADYLSRDLPYKLSADDVYVT 113 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~--~~-~~Y~~----~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t 113 (419)
..++|.|..+.+ .++++.+.+++.+.+... .. ..|.. .....++++.+++++ ++++++|++|
T Consensus 18 ~~~~iyld~~~~-----~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------~~~~~~v~~~ 86 (400)
T 3vax_A 18 GSHMTYLDAAAT-----TRVDQRVADIVLHWMTAEFGNAGSRHEYGIRAKRGVERAREYLASTV------SAEPDELIFT 86 (400)
T ss_dssp ----CCCCCCCC-----SSSCHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHHHHHHHHHT------TCCGGGEEEE
T ss_pred cCCcEEecCCCC-----CCCCHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHHHHHc------CCCCCcEEEe
Confidence 455666666653 256788999998887531 10 01111 122456677777766 4567899999
Q ss_pred ccHHHHHHHHHHHhc----CCCC-eEEeeCCCCCCcHHHHhh---cCCEEEEEeccCCCCcccChHHHHHhhcCCccEEE
Q 014769 114 LGCKQAVEVILSVLA----RPGA-NVLLPRPGWPYYEGIAQR---KQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMV 185 (419)
Q Consensus 114 ~g~~~al~~~~~~l~----~~gd-~vlv~~p~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~ 185 (419)
+|+++++..++.+++ ++|| .|+++.++|+++...+.. .|.+++.+++++ ++.+|+++|++++++++++++
T Consensus 87 ~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~--~~~~d~~~l~~~i~~~~~~v~ 164 (400)
T 3vax_A 87 SGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHLAGRGFEVDFLTPGP--SGRISVEGVMERLRPDTLLVS 164 (400)
T ss_dssp SCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHHHTTTCEEEEECCCT--TCCCCHHHHHTTCCTTEEEEE
T ss_pred CCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHHHhcCCeEEEEccCC--CCCcCHHHHHHhcCCCceEEE
Confidence 999999999999998 8999 999999999887554443 588999988754 567899999999998899999
Q ss_pred EeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEE
Q 014769 186 IINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLV 265 (419)
Q Consensus 186 i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~ 265 (419)
+++|+||||.+++ +++|.++|+++|+++|+|++|+... ....+..+ ..+++.|+||.++.+| +|+++
T Consensus 165 ~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~----~d~~~~s~~K~~g~~g--~g~~~ 231 (400)
T 3vax_A 165 LMHVNNETGVIQP---VAELAQQLRATPTYLHVDAAQGYGK----VPGDLTTP----IDMISISGHKIGAPKG--VGALV 231 (400)
T ss_dssp CCSBCTTTCBBCC---HHHHHHHHTTSSCEEEEECTTTTTT----SGGGGGSC----CSEEEEETGGGTSCSS--CEEEE
T ss_pred EECCCCCceeeCc---HHHHHHHHHhcCCEEEEEhhhhcCC----CCcChhhc----CcEEEEeHHHhCCCCc--eEEEE
Confidence 9999999999999 8899999999999999999998522 11222222 3388899999766555 67777
Q ss_pred -eeCCCCccchhhHHHHHH----hhhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC
Q 014769 266 -TNDPNGIFQKSGIIDSIK----DCLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN 340 (419)
Q Consensus 266 -~~~~~~~~~~~~~~~~l~----~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 340 (419)
++++........+...+. ......++++...+.++..+++.. .+++++.+++++++++.+.+.|+ .+++.+.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~-~~~~~~~- 308 (400)
T 3vax_A 232 TRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIF-EAEHAQWQVAAQDLRSRLLAGLA-STSFQVN- 308 (400)
T ss_dssp ECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHH-HHSHHHHHHHHHHHHHHHHHHHT-TTTCEEC-
T ss_pred EecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHhhC-CCCEEEe-
Confidence 665210000000000000 001123455666776666666542 34578888999999999999998 7788743
Q ss_pred CCCc---eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC-------------------CCeEEEEe-e--
Q 014769 341 KPEG---SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL-------------------KNWLRIAF-C-- 395 (419)
Q Consensus 341 ~p~~---g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~-------------------~~~~Ris~-~-- 395 (419)
.+.+ +.++++.++. .+..++...| . +||.+.+|..|.. .+++||++ +
T Consensus 309 ~~~~~~~~~~~~~~~~~------~~~~~l~~~L-~-~gi~v~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~iRls~~~~~ 380 (400)
T 3vax_A 309 GDQDHVVPHILNLSFED------VDAEAFLVTL-K-DLVAVATGSASTSASFTPSHVLRAMGLPEEAASKSLRFSWTPGQ 380 (400)
T ss_dssp SCTTSBCTTEEEEECTT------CCHHHHHHHH-H-HHHHHTTTTEEEEEEECCHHHHHTTTCCHHHHTSEEEEEEEEC-
T ss_pred CCcccCCCCEEEEEeCC------CCHHHHHHHH-h-cCcEEEecccccCCCCCccHHHHHcCCCccccCceEEEEccCCC
Confidence 4443 3455666653 2566777777 4 7999999865532 38999999 6
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~ 414 (419)
.+++++++++++|++++++
T Consensus 381 ~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 381 ATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp -------------------
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 4789999999999988764
No 131
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=100.00 E-value=3.2e-31 Score=255.50 Aligned_cols=349 Identities=12% Similarity=0.032 Sum_probs=231.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.++||+.|.+...... .+|.+.+++.+++... ..|....|..++++.+++++.+..+.+. +++|++|+|++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~-~~~v~~~~ggsea 116 (439)
T 3dxv_A 41 NGRELIDLSGAWGAASLGY-GHPAIVAAVSAAAANP--AGATILSASNAPAVTLAERLLASFPGEG-THKIWFGHSGSDA 116 (439)
T ss_dssp TSCEEEESSTTTTTCTTCB-SCHHHHHHHHHHHHSC--SCSCSSSSEEHHHHHHHHHHHHTTTCTT-TEEEEEESSHHHH
T ss_pred CCCEEEECCCchhhccCCC-CCHHHHHHHHHHHHhc--cCccccccCCHHHHHHHHHHHHhCCCCC-CCEEEEeCCHHHH
Confidence 4788999999987533222 6899999999998764 2455455667888888888887654322 1699999999999
Q ss_pred HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhcCCEE---------------EEEeccCCCCccc-----ChHHHHHhh
Q 014769 120 VEVILSVLA--RPGANVLLPRPGWPYYEGIAQRKQVEV---------------RHFDLLPERNWEV-----DLDAVEALA 177 (419)
Q Consensus 120 l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~g~~~---------------~~~~~~~~~~~~~-----~~~~l~~~~ 177 (419)
+..+++++. .+++.|++.+|+|+++...+...+... ..++.. ..+.. |++.|++++
T Consensus 117 ~~~al~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 117 NEAAYRAIVKATGRSGVIAFAGAYHGCTVGSMAFSGHSVQADAAKADGLILLPYPDPYR--PYRNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHHHSCCEEEEETTCCCCSSHHHHCC-------------CEEEECCCCSSS--CBTTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEECCCCCCCcHHHHhhcCCCchhhccccCCCCCCcEEcCCC--cccccccHHHHHHHHHHHH
Confidence 999999852 366899999999987655444333221 111111 11111 688999888
Q ss_pred ----cCCccEEEEeCCCCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 178 ----DKNTAAMVIINPGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 178 ----~~~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
.++++++++..++|++|.+. +.+++++|.++|++||+++|+||+|.++.+.+.. ..+..++...+++ ||||
T Consensus 195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~-~~~~~~~~~~di~---s~sK 270 (439)
T 3dxv_A 195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRL-HCFEHEGFVPDIL---VLGK 270 (439)
T ss_dssp HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSS-SGGGGTTCCCSEE---EECG
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchh-hHHHhcCCCCCEE---EEcc
Confidence 33455566666677888765 5666999999999999999999999976555432 1222233222333 8999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
.++ +|+|+||++++. ++++.+.... ..++ .+++++.++.++++.... ++..++++++++.+++.|.
T Consensus 271 ~~~-~G~riG~~~~~~--------~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~---~~~~~~~~~~~~~~~~~l~ 337 (439)
T 3dxv_A 271 GLG-GGLPLSAVIAPA--------EILDCASAFAMQTLH-GNPISAAAGLAVLETIDR---DDLPAMAERKGRLLRDGLS 337 (439)
T ss_dssp GGG-TTSCCEEEEEEH--------HHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHH
T ss_pred hhc-CCcceEEEEECH--------HHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHH
Confidence 987 599999999975 5666665442 2345 788888888887764321 2233344444444444443
Q ss_pred ----cCCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHH
Q 014769 332 ----EIPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALK 402 (419)
Q Consensus 332 ----~~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~ 402 (419)
.++.+. . .+..|.|+++.+..... +...+..++...++ ++||.+.|+..+ .+++||++ ..++++++
T Consensus 338 ~~~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~ 412 (439)
T 3dxv_A 338 ELAKRHPLIG-D-IRGRGLACGMELVCDRQSREPARAETAKLIYRAY-QLGLVVYYVGMN--GNVLEFTPPLTITETDIH 412 (439)
T ss_dssp HHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECHHHHHHHHHHHH-HHTEECEEESTT--SCEEEECCCTTCCHHHHH
T ss_pred HHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCCHHHHHHHHHHHH-HCCcEEeecCCC--CCEEEEECCCCCCHHHHH
Confidence 344433 2 33446677776621100 00012456666665 569999998533 57999987 46899999
Q ss_pred HHHHHHHHHHHHHh
Q 014769 403 DGLGRMKAFCQRHT 416 (419)
Q Consensus 403 ~~l~~l~~~~~~~~ 416 (419)
+++++|+++++++.
T Consensus 413 ~~l~~l~~~l~~~~ 426 (439)
T 3dxv_A 413 KALDLLDRAFSELS 426 (439)
T ss_dssp HHHHHHHHHHHTGG
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998763
No 132
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=100.00 E-value=3.7e-31 Score=253.28 Aligned_cols=336 Identities=13% Similarity=0.099 Sum_probs=233.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|..++||+.|....... ..+|.+.+++.+++..... ++. .+..++++.+++.+.+..| .++|++|+|+++|
T Consensus 55 ~g~~~lD~~~~~~~~~lG-~~~p~v~~ai~~~~~~~~~--~~~-~~~~~~~~~l~~~la~~~g----~~~v~~~~ggteA 126 (420)
T 2pb2_A 55 QGKEYIDFAGGIAVTALG-HCHPALVEALKSQGETLWH--TSN-VFTNEPALRLGRKLIDATF----AERVLFMNSGTEA 126 (420)
T ss_dssp TCCEEEESSHHHHTCTTC-BTCHHHHHHHHHHHTTCCC--CCT-TSCCHHHHHHHHHHHHHSS----CSEEEEESSHHHH
T ss_pred CCCEEEEccccccccccC-CCCHHHHHHHHHHHHhccc--ccC-ccCCHHHHHHHHHHHhhCC----CCeEEEeCCHHHH
Confidence 477899998883221111 2578999999999875321 211 1233566666666665444 5799999999999
Q ss_pred HHHHHHHhcC-------CC-CeEEeeCCCCCCcHHH-HhhcCCE------------EEEEeccCCCCcccChHHHHHhhc
Q 014769 120 VEVILSVLAR-------PG-ANVLLPRPGWPYYEGI-AQRKQVE------------VRHFDLLPERNWEVDLDAVEALAD 178 (419)
Q Consensus 120 l~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~-~~~~g~~------------~~~~~~~~~~~~~~~~~~l~~~~~ 178 (419)
++.+++++.. +| +.|++++|+|+++... +...|.+ +..++. .|+++|+++++
T Consensus 127 ~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~-------~d~~~le~~i~ 199 (420)
T 2pb2_A 127 NETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGFGPKPADIIHVPF-------NDLHAVKAVMD 199 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTSSSCCSCEEEECT-------TCHHHHHHHCC
T ss_pred HHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccCCCCCCCeEEecC-------CCHHHHHHHhc
Confidence 9999998875 67 5999999999876443 3334432 333332 27899999998
Q ss_pred CCccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC
Q 014769 179 KNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP 257 (419)
Q Consensus 179 ~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~ 257 (419)
+++++|+++.++|++|. +++.+++++|.++|+++|+++|+||+|.++.+.|... .+..++...+++ ||||.++ +
T Consensus 200 ~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~-~~~~~~~~~dii---t~sK~l~-~ 274 (420)
T 2pb2_A 200 DHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLF-AYMHYGVTPDIL---TSAKALG-G 274 (420)
T ss_dssp TTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCCCSEE---EECGGGG-T
T ss_pred cCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHH-HHHhcCCCCCeE---Eeccccc-C
Confidence 77888887777888884 6899999999999999999999999998776655432 112222222333 6899987 8
Q ss_pred CceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC---
Q 014769 258 GWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI--- 333 (419)
Q Consensus 258 G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--- 333 (419)
|+|+||+++++ ++++.++.. ...+++.+++++.++.++|+.... ++..++++++++++.+.|+++
T Consensus 275 G~~iG~~~~~~--------~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~ 343 (420)
T 2pb2_A 275 GFPVSAMLTTQ--------EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINT---PEVLQGIHTKRQQFVQHLQAIDEQ 343 (420)
T ss_dssp TSCCEEEEECH--------HHHTTCC----CCEECCCHHHHHHHHHHHHHHSS---HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEEEEhH--------HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999965 455544432 223457788888888888775332 345566777777777777653
Q ss_pred -CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHH
Q 014769 334 -PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKA 410 (419)
Q Consensus 334 -~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~ 410 (419)
|.+. . .+..|.++++.++... ..+..++...|+ ++||.+.|+. ++++|+++ ..+++++++++++|++
T Consensus 344 ~~~~~-~-~~~~g~~~~v~~~~~~---~~~~~~l~~~l~-~~Gi~v~~~~----~~~iRl~~~~~~t~eei~~~~~~l~~ 413 (420)
T 2pb2_A 344 FDIFS-D-IRGMGLLIGAELKPKY---KGRARDFLYAGA-EAGVMVLNAG----ADVMRFAPSLVVEEADIHEGMQRFAQ 413 (420)
T ss_dssp HCCEE-E-EEEETTEEEEEECGGG---TTCHHHHHHHHH-HTTEECEESS----TTEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred CCCeE-E-EEecceEEEEEECCCc---hHHHHHHHHHHH-HCCCEEEeCC----CCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 3222 1 1234667788876421 013567777775 4799999874 57999997 4689999999999999
Q ss_pred HHHHHh
Q 014769 411 FCQRHT 416 (419)
Q Consensus 411 ~~~~~~ 416 (419)
++++..
T Consensus 414 ~l~~~~ 419 (420)
T 2pb2_A 414 AVGKVV 419 (420)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 998754
No 133
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=3.2e-31 Score=256.00 Aligned_cols=357 Identities=13% Similarity=0.039 Sum_probs=236.6
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.+|||..|.+... .-..+|.+.+++.+++.... .|....+..+.+..+++++.+..+.. ..++|++|+|+++|
T Consensus 62 ~G~~ylD~~~~~~~~~-lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~~-~~~~v~~~~sGseA 137 (453)
T 4ffc_A 62 DGNSFIDLGAGIAVTT-VGASHPAVAAAIADQATHFT--HTCFMVTPYEQYVQVAELLNALTPGD-HDKRTALFNSGAEA 137 (453)
T ss_dssp TSCEEEESSHHHHTCT-TCTTCHHHHHHHHHHHHHCS--CCTTTTSCCHHHHHHHHHHHHHSSCS-SCEEEEEESSHHHH
T ss_pred CCCEEEEcCCCcccCc-CCCCCHHHHHHHHHHHHhcc--ccccCcCCCHHHHHHHHHHHHhCCCC-CCcEEEEeCcHHHH
Confidence 4777899998844321 11248999999999987642 35544455677777777777765522 35799999999999
Q ss_pred HHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCC--CCcccC--------hHHH
Q 014769 120 VEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE--RNWEVD--------LDAV 173 (419)
Q Consensus 120 l~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--~~~~~~--------~~~l 173 (419)
++.+++.+.. .++.|++.+++|+++...+...+. .+..++.... ..++.+ ++.|
T Consensus 138 ~~~alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l 217 (453)
T 4ffc_A 138 VENAIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRI 217 (453)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHH
Confidence 9999987753 458999999999987655544322 3444444211 111222 3556
Q ss_pred HHhhcCCccEEEEeCCCCccc--cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCC
Q 014769 174 EALADKNTAAMVIINPGNPCG--NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS 251 (419)
Q Consensus 174 ~~~~~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s 251 (419)
++.+.+++.++++++|.|++| ...+.+++++|.++|++||+++|+||+|.++.+.|... ....++.... +.|||
T Consensus 218 ~~~i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-a~~~~~~~pd---i~t~s 293 (453)
T 4ffc_A 218 ETQIGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWF-ASEHEGIVPD---IVTMA 293 (453)
T ss_dssp HHHTCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEEC
T ss_pred HHhcCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccc-hhhhcCCCcc---hHhhh
Confidence 666655677888899988776 45688899999999999999999999999876655321 2222222222 33789
Q ss_pred CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHH
Q 014769 252 KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 252 K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~ 329 (419)
|.++. |+|+||+++++ ++++.+.... ..+++.+++++.++.++|+... .+..++.++.....++.+.+.
T Consensus 294 K~~~~-G~~~G~~~~~~--------~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~ 364 (453)
T 4ffc_A 294 KGIAG-GMPLSAVTGRA--------ELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSAL 364 (453)
T ss_dssp GGGGT-TSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcC-CcCeEEEEECH--------HHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Confidence 99866 99999999875 5666665443 3457788999988888887532 223333333333444444444
Q ss_pred hhcCCCCCCCCCCCceEEEEeecCccc--ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHH
Q 014769 330 VKEIPCISCPNKPEGSMVTMVKLNPWL--LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGL 405 (419)
Q Consensus 330 l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l 405 (419)
+..++.+. . .+..|.++++.+.... .+......++...+ .++||.+.|+..| .+++|+++ ..+++++++++
T Consensus 365 ~~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~i~~~l 439 (453)
T 4ffc_A 365 AEEVDIIG-E-VRGRGAMLAIEIVKPGTLEPDAALTKSIAAEA-LSQGVLILTCGTF--GNVIRLLPPLVIGDDLLDEGI 439 (453)
T ss_dssp HHHCSSEE-E-EEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECCEECTT--SCEEEECCCTTCCHHHHHHHH
T ss_pred HhhCCCeE-E-EEeeceEEEEEEecCcccCCCHHHHHHHHHHH-HhCCCEEecCCCC--CCEEEEECCCCCCHHHHHHHH
Confidence 44555443 2 2344667777763200 00001234555555 5679999998654 46899987 45899999999
Q ss_pred HHHHHHHHHHhcc
Q 014769 406 GRMKAFCQRHTKK 418 (419)
Q Consensus 406 ~~l~~~~~~~~~~ 418 (419)
++|++++++..++
T Consensus 440 ~~l~~~l~~~~~~ 452 (453)
T 4ffc_A 440 TALSDIIRAKASH 452 (453)
T ss_dssp HHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhc
Confidence 9999999987654
No 134
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.98 E-value=6.2e-31 Score=250.29 Aligned_cols=326 Identities=16% Similarity=0.149 Sum_probs=240.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
.++|||+.|.|. .++.+++++.+.+... .|.+..+..++|+++++++. . +++++++|+++++.
T Consensus 30 ~~~id~~~~~~~------~~~~v~~a~~~~~~~~---~y~~~~~~~~l~~~la~~~~------~--~~~v~~~~Gt~a~~ 92 (399)
T 2oga_A 30 VPFLDLKAAYEE------LRAETDAAIARVLDSG---RYLLGPELEGFEAEFAAYCE------T--DHAVGVNSGMDALQ 92 (399)
T ss_dssp BCSCCHHHHHHH------THHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHTT------S--SEEEEESCHHHHHH
T ss_pred CcccccCcCCCC------CCHHHHHHHHHHHhcC---CCCCchhHHHHHHHHHHHHC------C--CeEEEecCHHHHHH
Confidence 478999999742 2388999998887652 56666778999999999982 2 26778888899999
Q ss_pred HHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 122 VILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 122 ~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
.++.++ +++||+|+++.|+|+++...++..|.+++.++++++ ++.+|++.+++++++++++|+ |+||||.+.+
T Consensus 93 ~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~-- 166 (399)
T 2oga_A 93 LALRGLGIGPGDEVIVPSHTYIASWLAVSATGATPVPVEPHED-HPTLDPLLVEKAITPRTRALL---PVHLYGHPAD-- 166 (399)
T ss_dssp HHHHHTTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCSS-SSSBCHHHHHHHCCTTEEEEC---CBCGGGCCCC--
T ss_pred HHHHHhCCCCcCEEEECCCccHHHHHHHHHCCCEEEEEecCCC-CCCcCHHHHHHhcCCCCeEEE---EeCCcCCccC--
Confidence 999999 889999999999999999999999999999987642 467999999999987666555 6789999988
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
+++|.++|+++|+++|+|++|+.+. +++.. +..+. .+++.|+ ||.++.+| |+||++++++ +
T Consensus 167 -l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~---~~~~~----di~~~S~~~sK~~~~~G-~~g~~~~~~~-------~ 230 (399)
T 2oga_A 167 -MDALRELADRHGLHIVEDAAQAHGARYRGRR---IGAGS----SVAAFSFYPGKNLGCFG-DGGAVVTGDP-------E 230 (399)
T ss_dssp -HHHHHHHHHHHTCEECEECTTCTTCEETTEE---TTCTT----CEEEEECCTTSSSCCSS-CCEEEEESCH-------H
T ss_pred -HHHHHHHHHHcCCEEEEECcccccCccCCee---ccccc----CEEEEeCCCCccCCcCC-ceEEEEeCCH-------H
Confidence 8999999999999999999998753 33221 11111 3778888 79988878 9999998642 4
Q ss_pred HHHHHHhhhcc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc
Q 014769 278 IIDSIKDCLSI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG 344 (419)
Q Consensus 278 ~~~~l~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~ 344 (419)
+++.++..... .+..+.+.+.++...++. +++..++.+++.+.+.+.|.+++++.....|..
T Consensus 231 ~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~-----~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~ 305 (399)
T 2oga_A 231 LAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAH-----LDSWNGRRSALAAEYLSGLAGLPGIGLPVTAPD 305 (399)
T ss_dssp HHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHTTTCTTCBCCCCCTT
T ss_pred HHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccCCCccccCCCCC
Confidence 66666554321 123455665555555543 344556666778888899988878764334666
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC-----------CC------------CCeEEEEee--cCHH
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV-----------GL------------KNWLRIAFC--AEPS 399 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~-----------~~------------~~~~Ris~~--~~~~ 399 (419)
+.++|+.++... .+..++...| .++||.+.++... +. .+++||++. .+++
T Consensus 306 ~~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~lRi~~~~~~t~e 380 (399)
T 2oga_A 306 TDPVWHLFTVRT----ERRDELRSHL-DARGIDTLTHYPVPVHLSPAYAGEAPPEGSLPRAESFARQVLSLPIGPHLERP 380 (399)
T ss_dssp EECCCSSEEEEC----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSHHHHTTSCCTTSCHHHHHHHHHEEEECCSTTCCHH
T ss_pred CcceeEEEEEEC----CCHHHHHHHH-HHCCCceecCCCCccccchhhcccCCCCCCChhHHHHHhCEEEccCCCCCCHH
Confidence 666653332210 1456677666 5679999875421 10 257999994 5899
Q ss_pred HHHHHHHHHHHHHHHHh
Q 014769 400 ALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~~~ 416 (419)
+++++++.|+++++++.
T Consensus 381 di~~~~~~l~~~~~~l~ 397 (399)
T 2oga_A 381 QALRVIDAVREWAERVD 397 (399)
T ss_dssp HHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999987643
No 135
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.98 E-value=1.2e-31 Score=258.09 Aligned_cols=351 Identities=13% Similarity=0.075 Sum_probs=231.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.|..++||+.|.+..... ..+|.+.+++.+++..... +. ..+..+++..+++.+.+.++ .++++|++|+|++++
T Consensus 41 ~g~~~lD~~~~~~~~~lG-~~~p~v~~a~~~~~~~~~~--~~-~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~gg~ea 114 (433)
T 1zod_A 41 DGRAILDFTSGQMSAVLG-HCHPEIVSVIGEYAGKLDH--LF-SEMLSRPVVDLATRLANITP--PGLDRALLLSTGAES 114 (433)
T ss_dssp TCCEEEETTHHHHTCTTC-BTCHHHHHHHHHHHHHCCC--CC-TTCCCHHHHHHHHHHHHHSC--TTCCEEEEESCHHHH
T ss_pred CCCEEEEcccchhccccC-CCCHHHHHHHHHHHHhCcc--cc-cccCCHHHHHHHHHHHHhCC--CCcCEEEEeCchHHH
Confidence 367788998875432212 2478999999998865321 11 12223455555555555444 457899999999999
Q ss_pred HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhc------------CCEEEEEeccCC--CCc--------ccChHHHHH
Q 014769 120 VEVILSVLA--RPGANVLLPRPGWPYYEGIAQRK------------QVEVRHFDLLPE--RNW--------EVDLDAVEA 175 (419)
Q Consensus 120 l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~------------g~~~~~~~~~~~--~~~--------~~~~~~l~~ 175 (419)
++.+++.+. ..+++|++.+|+|+++...+... ...+..++.+.. ..+ .+|++.|++
T Consensus 115 ~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~ 194 (433)
T 1zod_A 115 NEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVGSFAIPAPFTYRPRFERNGAYDYLAELDYAFD 194 (433)
T ss_dssp HHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTTEEEECCCCTTSCCCEETTEECHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCCceEecCCcccccccCCchhhhHHHHHHHHHH
Confidence 999998754 23589999999998765433321 013344433211 111 246889988
Q ss_pred hhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769 176 LADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (419)
Q Consensus 176 ~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 250 (419)
++++ +...+++++| +||||. +.+.+++++|.++|++||+++|+||+|+++.+.+... .+..++...+ +.|+
T Consensus 195 ~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~g~~g~~~-~~~~~~~~~d---i~s~ 270 (433)
T 1zod_A 195 LIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILDEAQTGVGRTGTMF-ACQRDGVTPD---ILTL 270 (433)
T ss_dssp HHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCS---EEEE
T ss_pred HHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeccccCCCcCchHh-HHhhcCCCCC---EEEe
Confidence 8863 3345666777 588996 5789999999999999999999999999876544321 1122222222 2389
Q ss_pred CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh---ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL---SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY 327 (419)
Q Consensus 251 sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 327 (419)
||.++. |+|+||+++++ ++++.+.... ..+++.+++++.++.++++.... +...++++++++.+.
T Consensus 271 sK~~~~-G~~ig~~~~~~--------~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal~~~~~---~~~~~~~~~~~~~l~ 338 (433)
T 1zod_A 271 SKTLGA-GLPLAAIVTSA--------AIEERAHELGYLFYTTHVSDPLPAAVGLRVLDVVQR---DGLVARANVMGDRLR 338 (433)
T ss_dssp CHHHHT-TSSCEEEEECH--------HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHH
T ss_pred cccccC-CCCeeEEEEhH--------HHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHh---CCHHHHHHHHHHHHH
Confidence 999875 99999999975 5777776531 13566788888888888764221 123455555666666
Q ss_pred HHhhc----CCCCCCCCCCCceEEEEeecCcccc---cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCH
Q 014769 328 DGVKE----IPCISCPNKPEGSMVTMVKLNPWLL---EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEP 398 (419)
Q Consensus 328 ~~l~~----~~~~~~~~~p~~g~~~~~~~~~~~~---~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~ 398 (419)
+.|++ ++.+. . .+..|.|+|+.++.... ....+..++...++ ++||.+.||..|+.++++||++ ..++
T Consensus 339 ~~l~~l~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~~~~~~~lRi~~~~~~t~ 415 (433)
T 1zod_A 339 RGLLDLMERFDCIG-D-VRGRGLLLGVEIVKDRRTKEPADGLGAKITRECM-NLGLSMNIVQLPGMGGVFRIAPPLTVSE 415 (433)
T ss_dssp HHHHHHHHHCTTEE-E-EEEETTEEEEEEEEETTTTEECTTHHHHHHHHHH-HTTEECCEECCTTSCCEEEECCCTTCCH
T ss_pred HHHHHHHHhCCCeE-E-EEEEEEEEEEEEecCccccCCChHHHHHHHHHHH-HCCCeEeccCCCCCCCEEEEECCcCCCH
Confidence 66654 33332 2 23346677887753100 00012456777775 6799999998776568999987 4689
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014769 399 SALKDGLGRMKAFCQRH 415 (419)
Q Consensus 399 ~~l~~~l~~l~~~~~~~ 415 (419)
+++++++++|+++++++
T Consensus 416 ~~i~~~l~~l~~~l~~~ 432 (433)
T 1zod_A 416 DEIDLGLSLLGQAIERA 432 (433)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999999998765
No 136
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.98 E-value=1.7e-30 Score=249.23 Aligned_cols=336 Identities=15% Similarity=0.131 Sum_probs=239.7
Q ss_pred cCCCCCee--eccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC-CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 38 KNDPRPVV--PLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT-NSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 38 ~~~~~~~i--~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~-~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
...|.+++ +|+.|.|. ++.++.+.+++.+.+..+ .|++ ..+..++|+++++++. .+++++|+
T Consensus 10 ~~gg~~~~~~~l~~~~p~----~~~p~~~~~a~~~~~~~~---~y~~~~~~~~~l~~~la~~~~--------~~~v~~~~ 74 (424)
T 2po3_A 10 FFGGPAAFDQPLLVGRPN----RIDRARLYERLDRALDSQ---WLSNGGPLVREFEERVAGLAG--------VRHAVATC 74 (424)
T ss_dssp GGTCCCSCSSCEETTCCC----CCCHHHHHHHHHHHHHHT---CCSSSCHHHHHHHHHHHHHHT--------SSEEEEES
T ss_pred hhcCCccccccccccCCC----CCChHHHHHHHHHHHhcC---CcccCCHHHHHHHHHHHHHhC--------CCeEEEeC
Confidence 34566665 68888864 566889999999888653 4776 6788999999999983 25899999
Q ss_pred cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccc
Q 014769 115 GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCG 194 (419)
Q Consensus 115 g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG 194 (419)
|+++++..++.++. +||+|++++|+|+++...+...|.+++.+++++ +++.+|++.+++++++++++|++++ |||
T Consensus 75 ggt~al~~~l~~l~-~gd~Vlv~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~---~tG 149 (424)
T 2po3_A 75 NATAGLQLLAHAAG-LTGEVIMPSMTFAATPHALRWIGLTPVFADIDP-DTGNLDPDQVAAAVTPRTSAVVGVH---LWG 149 (424)
T ss_dssp CHHHHHHHHHHHHT-CCSEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTSSBCHHHHGGGCCTTEEEEEEEC---GGG
T ss_pred CHHHHHHHHHHHcC-CCCEEEECCCccHHHHHHHHHcCCEEEEEecCC-CcCCcCHHHHHHhhCcCCcEEEEEC---CCC
Confidence 99999999999985 789999999999999999999999999998864 3567999999999987788888754 899
Q ss_pred cCCCHHHHHHHHHHHHhCCCeEEEccccc-ccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769 195 NVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF 273 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 273 (419)
...+ +++|.++|+++|+++|+|++|+ ++.+++.. +..+. + +++.||||.++++|.|+||++++++
T Consensus 150 ~~~~---l~~i~~la~~~~~~li~Dea~~~g~~~~~~~---~~~~~---d-i~~~S~sk~K~l~~~~~G~~v~~~~---- 215 (424)
T 2po3_A 150 RPCA---ADQLRKVADEHGLRLYFDAAHALGCAVDGRP---AGSLG---D-AEVFSFHATKAVNAFEGGAVVTDDA---- 215 (424)
T ss_dssp CCCC---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS---S-EEEEECCTTSSSCCSSCEEEEESCH----
T ss_pred CcCC---HHHHHHHHHHcCCEEEEECccccCCeECCee---ccccc---C-EEEEeCCCCCCccCCCCeEEEeCCH----
Confidence 9876 9999999999999999999999 46555432 22222 2 8889999666677799999998631
Q ss_pred chhhHHHHHHhhhcccc----------CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 014769 274 QKSGIIDSIKDCLSIYS----------DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE 343 (419)
Q Consensus 274 ~~~~~~~~l~~~~~~~~----------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~ 343 (419)
++++.++....... ....+.+.++..++.. .+.+++..++.+++++.+.+.|++++++.++..|.
T Consensus 216 ---~l~~~l~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~--~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~ 290 (424)
T 2po3_A 216 ---DLAARIRALHNFGFDLPGGSPAGGTNAKMSEAAAAMGLTS--LDAFPEVIDRNRRNHAAYREHLADLPGVLVADHDR 290 (424)
T ss_dssp ---HHHHHHHHHHBTTTTCTTCCTTCCCBCCCCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHTCSCTTEEECCGGG
T ss_pred ---HHHHHHHHHHhcCccccccccccCcCCCcCHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHhccCCCccccCCCC
Confidence 46666665432110 0001112222222322 24566677778888888999998887776332244
Q ss_pred ce----EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------------C-------CCeEEEEe--ec
Q 014769 344 GS----MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------------L-------KNWLRIAF--CA 396 (419)
Q Consensus 344 ~g----~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------~-------~~~~Ris~--~~ 396 (419)
++ +++++.++.... + .+..++...| .++||.+.+..... . ...+|+++ ..
T Consensus 291 ~~~~~~~~~~i~~~~~~~-~-~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~g~~~~~~~~r~~~~~l~l~~~~~~ 367 (424)
T 2po3_A 291 HGLNNHQYVIVEIDEATT-G-IHRDLVMEVL-KAEGVHTRAYFSPGCHELEPYRGQPHAPLPHTERLAARVLSLPTGTAI 367 (424)
T ss_dssp GSCCCCCCEEEEECHHHH-S-SCHHHHHHHH-HHTTEECBCTTCSCGGGSTTTTTSCCCCCHHHHHHHTTEEEECCSTTC
T ss_pred CCccccEEEEEEECCccc-h-hhHHHHHHHH-HHCCCceecccCCccccchhhhhcCCCCChhHHHHhcCEEEeeCCCCC
Confidence 33 233355652100 0 1456666655 67899998732100 0 11277774 46
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 014769 397 EPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~~~ 415 (419)
++++++++++.|++++++.
T Consensus 368 t~e~i~~~~~~L~~~~~~~ 386 (424)
T 2po3_A 368 GDDDIRRVADLLRLCATRG 386 (424)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhhh
Confidence 8999999999999988654
No 137
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.98 E-value=1.4e-31 Score=253.43 Aligned_cols=329 Identities=14% Similarity=0.115 Sum_probs=236.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC--CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
++.+.|+.|. .++++.+.+++.+.+.. .|.+. ....++++++++++.... ++++++|++|+|++++
T Consensus 4 ~~~~~~~p~p------~~~~~~v~~a~~~~~~~----~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~v~~~~g~t~a 71 (385)
T 2bkw_A 4 SVDTLLIPGP------IILSGAVQKALDVPSLG----HTSPEFVSIFQRVLKNTRAVFKSAA--ASKSQPFVLAGSGTLG 71 (385)
T ss_dssp CCCEECSSSS------CCCCHHHHHTTSCCCCC----TTSHHHHHHHHHHHHHHHHHTTCCG--GGTCEEEEEESCTTHH
T ss_pred ccceeecCCC------cCchHHHHHHHhccccc----cCCHHHHHHHHHHHHHHHHHhCCCC--CCCCceEEEcCchHHH
Confidence 4556777763 34567777776543321 22221 135677888888875422 3457899999999999
Q ss_pred HHHHHHHhc---CCCCeEEee-CCCCCCc-HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCcc
Q 014769 120 VEVILSVLA---RPGANVLLP-RPGWPYY-EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPC 193 (419)
Q Consensus 120 l~~~~~~l~---~~gd~vlv~-~p~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~npt 193 (419)
+..++.++. ++||+|+++ .|.|+.. ...++..|.+++.+++. +.++.+|++.|++++++ ++++|++++|+|||
T Consensus 72 l~~~~~~~~~~~~~gd~vlv~~~~~~~~~~~~~~~~~g~~~~~v~~~-~~~~~~d~~~l~~~l~~~~~~~v~~~~~~npt 150 (385)
T 2bkw_A 72 WDIFASNFILSKAPNKNVLVVSTGTFSDRFADCLRSYGAQVDVVRPL-KIGESVPLELITEKLSQNSYGAVTVTHVDTST 150 (385)
T ss_dssp HHHHHHHHSCTTCSCCEEEEECSSHHHHHHHHHHHHTTCEEEEECCS-STTSCCCHHHHHHHHHHSCCSEEEEESEETTT
T ss_pred HHHHHHHHhccCCCCCeEEEEcCCcchHHHHHHHHHcCCceEEEecC-CCCCCCCHHHHHHHHhcCCCCEEEEEccCCCc
Confidence 999999997 899999888 4555544 35677889999998872 23567899999999876 78999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhC--CCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEEEEeeCCC
Q 014769 194 GNVFTYHHLQEIAEMARKL--RVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGWLVTNDPN 270 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~--~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~~~~~~~~ 270 (419)
|.+++ +++|.++|+++ |+++|+|++|+... ....+..+ +..+++.|+||+++ .+| +||+++++
T Consensus 151 G~~~~---l~~i~~~~~~~~~~~~li~D~a~~~~~----~~~~~~~~---~~d~~~~s~~K~~~~~~G--~G~~~~~~-- 216 (385)
T 2bkw_A 151 AVLSD---LKAISQAIKQTSPETFFVVDAVCSIGC----EEFEFDEW---GVDFALTASQKAIGAPAG--LSISLCSS-- 216 (385)
T ss_dssp TEECC---HHHHHHHHHHHCTTSEEEEECTTTTTT----SCCCTTTT---TCSEEEEESSSTTCCCSC--EEEEEECH--
T ss_pred CeEcC---HHHHHHHHHhhCCCCEEEEECccccCC----cccccccc---CceEEEecCccccccCCc--ceEEEEcH--
Confidence 99999 88999999999 99999999998522 11122222 23478899999644 456 59999865
Q ss_pred CccchhhHHH-HHH----------------------hhhc---c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHH
Q 014769 271 GIFQKSGIID-SIK----------------------DCLS---I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESA 323 (419)
Q Consensus 271 ~~~~~~~~~~-~l~----------------------~~~~---~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 323 (419)
++++ .++ .... . .++++...+.++..+++......+++..+++++++
T Consensus 217 ------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~ 290 (385)
T 2bkw_A 217 ------RFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKEILEEGLHKRWDLHREMS 290 (385)
T ss_dssp ------HHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHH
T ss_pred ------HHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHHHH
Confidence 3333 221 1111 0 23567777777777776432233677888999999
Q ss_pred HHHHHHh-hcCCCCCCCCCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-CCCeEEEE-ee
Q 014769 324 EICYDGV-KEIPCISCPNKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-LKNWLRIA-FC 395 (419)
Q Consensus 324 ~~l~~~l-~~~~~~~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-~~~~~Ris-~~ 395 (419)
+.+.+.| +++ ++.++ .| ..+.++|+.++ +..++...| .++||.+.+|..+. ..+++|++ ++
T Consensus 291 ~~l~~~L~~~~-g~~~~-~~~~~~~~~~~~~~~~~~--------~~~~~~~~l-~~~gi~v~~g~~~~~~~~~iRis~~~ 359 (385)
T 2bkw_A 291 DWFKDSLVNGL-QLTSV-SRYPSNMSAHGLTAVYVA--------DPPDVIAFL-KSHGVVIAGGIHKDIGPKYIRIGHMG 359 (385)
T ss_dssp HHHHHHHHTTT-CCEES-SCSSSTTBCSSCEEEECS--------CHHHHHHHH-HHTTEECBCCCCTTTGGGEEEECCCG
T ss_pred HHHHHHHHHhc-Cceec-ccCcccccCCceEEEecC--------CHHHHHHHH-HHCCeEEeCCCCcccCCCEEEEEccc
Confidence 9999999 887 77633 32 24778888875 256677776 56899999987653 35799999 65
Q ss_pred -----cCHHHHHHHHHHHHHHHHH
Q 014769 396 -----AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 -----~~~~~l~~~l~~l~~~~~~ 414 (419)
.+++++++++++|++++++
T Consensus 360 ~~~~~~~~e~i~~~~~~l~~~~~~ 383 (385)
T 2bkw_A 360 VTACNKNLPYMKNCFDLIKLALQR 383 (385)
T ss_dssp GGTSSTTCTHHHHHHHHHHHHTTC
T ss_pred cccccCCHHHHHHHHHHHHHHHHh
Confidence 4889999999999988754
No 138
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.98 E-value=1.3e-30 Score=247.92 Aligned_cols=335 Identities=12% Similarity=0.072 Sum_probs=230.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.++||+.|.+... .-..+|.+.+++.+++..... .| ..+..++++.+++++.+..| +++|++|+|++++
T Consensus 34 ~g~~~lD~~~~~~~~~-lG~~~p~v~~a~~~~~~~~~~-~~--~~~~~~~~~~l~~~la~~~~----~~~v~~~~gg~ea 105 (395)
T 3nx3_A 34 KAKKYLDFSSGIGVCA-LGYNHAKFNAKIKAQVDKLLH-TS--NLYYNENIAAAAKNLAKASA----LERVFFTNSGTES 105 (395)
T ss_dssp TCCEEEESSHHHHTCT-TCBSCHHHHHHHHHHHTTCSC-CC--TTSBCHHHHHHHHHHHHHHT----CSEEEEESSHHHH
T ss_pred CCCEEEECCCcHHhcc-CCCCCHHHHHHHHHHHHhccc-cc--cccCCHHHHHHHHHHHHhcC----CCeEEEeCCHHHH
Confidence 4788999999854321 112579999999998875422 12 12233455555555555433 5799999999999
Q ss_pred HHHHHHHhc-------CCCCeEEeeCCCCCCcHHHHhhcC-------------CEEEEEeccCCCCcccChHHHHHhhcC
Q 014769 120 VEVILSVLA-------RPGANVLLPRPGWPYYEGIAQRKQ-------------VEVRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 120 l~~~~~~l~-------~~gd~vlv~~p~~~~~~~~~~~~g-------------~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
+..+++.+. .++|.|++.+|+|+++...+...+ .++..++. .|+++|++++++
T Consensus 106 ~~~al~~~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~ 178 (395)
T 3nx3_A 106 IEGAMKTARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKY-------NDISSVEKLVNE 178 (395)
T ss_dssp HHHHHHHHHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECT-------TCHHHHHTTCCT
T ss_pred HHHHHHHHHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCC-------CCHHHHHHhccC
Confidence 999998875 347999999999988754433332 23333332 278999999987
Q ss_pred CccEEEEeCCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 180 NTAAMVIINPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 180 ~~~~v~i~~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
+++++++..++|++|.. .+.+++++|.++|++||+++|+||+|.++...+... ....++.... +.|+||.++. |
T Consensus 179 ~~~~v~~~~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~-~~~~~~~~~d---~~t~sK~~~~-G 253 (395)
T 3nx3_A 179 KTCAIILESVQGEGGINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFF-AYEHAQILPD---IMTSAKALGC-G 253 (395)
T ss_dssp TEEEEEEESEECTTSCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGGTCCCS---EEEECGGGTT-T
T ss_pred CeEEEEEeCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcch-hHHhcCCCCC---EEEecccccC-C
Confidence 77777777777777775 789999999999999999999999999876554321 2222222222 3378999864 9
Q ss_pred ceeEEEEeeCCCCccchhhH-HHHHHhhh-ccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 259 WRFGWLVTNDPNGIFQKSGI-IDSIKDCL-SIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~-~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+|+||+++++ ++ ++.++... ..+++.+++++.++.++++... .+..++.++.....++.+.+.+..+|.
T Consensus 254 ~~~G~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 325 (395)
T 3nx3_A 254 LSVGAFVINQ--------KVASNSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELINEFDF 325 (395)
T ss_dssp SCCEEEEECH--------HHHHHHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHCTT
T ss_pred CceEEEEEch--------hhhhhhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999865 56 66665543 3356778888888888887432 233444344444444445444444544
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~ 413 (419)
+. . .+..|.++++.++.. .+..++...+ .++||.+.|+. .+++|+++ ..+++++++++++|+++++
T Consensus 326 ~~-~-~~~~g~~~~~~~~~~-----~~~~~~~~~l-~~~Gi~v~~~~----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~ 393 (395)
T 3nx3_A 326 CK-K-RKGLGFMQGLSLDKS-----VKVAKVIQKC-QENALLLISCG----ENDLRFLPPLILQKEHIDEMSEKLRKALK 393 (395)
T ss_dssp EE-E-EEEETTEEEEEECTT-----SCHHHHHHHH-HHTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHH
T ss_pred eE-E-EEeEEEEEEEEeCCc-----chHHHHHHHH-HHCCCEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 33 2 234466888888642 2456777776 56799999874 68999987 4689999999999999886
Q ss_pred H
Q 014769 414 R 414 (419)
Q Consensus 414 ~ 414 (419)
+
T Consensus 394 ~ 394 (395)
T 3nx3_A 394 S 394 (395)
T ss_dssp T
T ss_pred h
Confidence 4
No 139
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.98 E-value=1.7e-30 Score=251.62 Aligned_cols=358 Identities=15% Similarity=0.032 Sum_probs=238.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||+.|..... .-..+|.+.+++.+++..... .|....+..++++++++.+.+..+ .+.++|++|+|+++
T Consensus 48 ~~G~~~lD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~gGse 123 (460)
T 3gju_A 48 NNGRKSIDAFAGLYCVN-VGYGRQKIADAIATQAKNLAY-YHAYVGHGTEASITLAKMIIDRAP--KGMSRVYFGLSGSD 123 (460)
T ss_dssp TTCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHHHHSC-CCCCTTCCCHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHhhCC--CCcCEEEEeCchHH
Confidence 35888999998843211 123479999999998865322 344434555677777777776543 45679999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccCC---CCcccC-----
Q 014769 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLPE---RNWEVD----- 169 (419)
Q Consensus 119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~~---~~~~~~----- 169 (419)
+++.++++++. +++.|++.+|+|+++...+...+. .+..++.... ++.+.+
T Consensus 124 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~ 203 (460)
T 3gju_A 124 ANETNIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFS 203 (460)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHH
Confidence 99999999874 459999999999987655443321 2344443210 111223
Q ss_pred ---hHHHHHhhcC---CccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 170 ---LDAVEALADK---NTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 170 ---~~~l~~~~~~---~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
++.|++++.. +..++++++| +|++|. +.+.+++++|.++|++||+++|+||+|.++.+.|... .+..++..
T Consensus 204 ~~~~~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~-~~~~~~~~ 282 (460)
T 3gju_A 204 QHCADKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMF-GSDHYGIK 282 (460)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence 5778877752 3344555555 667776 7789999999999999999999999999876655322 12222322
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccc-hHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTK-EDFF 312 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~-~~~~ 312 (419)
..++ +|||.++..++|+||+++++ ++++.+... ...+++.+++++.++.++|+... .+.+
T Consensus 283 pdi~---t~sK~l~gG~~~lg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 351 (460)
T 3gju_A 283 PDLI---TIAKGLTSAYAPLSGVIVAD--------RVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLV 351 (460)
T ss_dssp CSEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred CCee---eeehhhcCCCCCeEEEEECH--------HHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 2233 68999644228999999976 677877531 23456788999999888887532 3445
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc--C----CCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE--D----INDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~--~----~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
++.++.....++.+.+.+.+++.+. . .+..|.++++.+...... . .....++...+ .++||.+.|+. .
T Consensus 352 ~~~~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~---~ 425 (460)
T 3gju_A 352 TNAGETGAYFRAELAKAVGGHKNVG-E-VRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATAL-AASGVIGRAMP---Q 425 (460)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEECS---S
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeE-E-EeeeeEEEEEEEccCccccccccchHHHHHHHHHHH-HHCCeEEecCC---C
Confidence 5555566666666766666665444 2 233355667766532100 0 00134555555 55799999975 3
Q ss_pred CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 387 KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
.+++||++ ..+++++++++++|++++++..++
T Consensus 426 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~~ 459 (460)
T 3gju_A 426 GDILGFAPPLCLTREQADIVVSKTADAVKSVFAN 459 (460)
T ss_dssp SCEEEECCCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHhc
Confidence 58999996 568999999999999999887653
No 140
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.98 E-value=4e-30 Score=252.53 Aligned_cols=312 Identities=13% Similarity=0.114 Sum_probs=231.8
Q ss_pred CCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcE--EEcccHHHHHHHHHHHhcCCC--------CeEEeeCCCCCCcHHHH
Q 014769 79 CYATNSGIPPARRAIADYLSRDLPYKLSADDV--YVTLGCKQAVEVILSVLARPG--------ANVLLPRPGWPYYEGIA 148 (419)
Q Consensus 79 ~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i--~~t~g~~~al~~~~~~l~~~g--------d~vlv~~p~~~~~~~~~ 148 (419)
.|....+..++++.+++++.+.+|...+++++ ++|+|+++++..++++++.+| |+|+++.|+|.++...+
T Consensus 130 ~~~~~p~~~~le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~~~~ 209 (514)
T 3mad_A 130 HPDLWPSTAKFEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFDKAA 209 (514)
T ss_dssp CTTTCHHHHHHHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHHHHH
T ss_pred ccccChHHHHHHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHHHHH
Confidence 44444566788899989988888876666788 999999999999999998776 99999999999999999
Q ss_pred hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769 149 QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (419)
Q Consensus 149 ~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 228 (419)
...|.+++.+++++ ++.+|+++|++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+.
T Consensus 210 ~~~G~~v~~v~~~~--~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~i~livDea~~~~~~~ 284 (514)
T 3mad_A 210 QYFGIKLVRTPLDA--DYRADVAAMREAITPNTVVVAGSAPGYPHGVVDP---IPEIAALAAEHGIGCHVDACLGGFILP 284 (514)
T ss_dssp HHHTCEEEEECBCT--TSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTTTTHH
T ss_pred HHcCCeeEEeeeCC--CCCCCHHHHHHHhccCCEEEEEeCCCCCCccccC---HHHHHHHHHHhCCeEEEecccccccch
Confidence 99999999998764 5689999999999988999999999999999999 899999999999999999999976541
Q ss_pred -----CCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh------------ccccC
Q 014769 229 -----SIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL------------SIYSD 291 (419)
Q Consensus 229 -----~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~------------~~~~~ 291 (419)
|.+..++. ....+..+++.|++|. +.+|.++|++++++ +......... ...++
T Consensus 285 ~~~~~g~~~~~~~-~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~gs 354 (514)
T 3mad_A 285 WAERLGYPVPPFD-FRLEGVTSVSADTHKY-GYGAKGTSVILYRR--------PDLLHYQYFIAADWPGGLYFSPTFAGS 354 (514)
T ss_dssp HHHHTTCCCCCCS-TTSTTCCEEEECTTTT-TCCCSSCEEEEESS--------HHHHTTTCEEESSCTTCSEEESSSCSS
T ss_pred hHHhcCCCCCccc-ccCCCCcEEEECchhc-cCCCCCeEEEEEeC--------HHHhccccccccccCCCcccCCccCCC
Confidence 22111221 1222235778899998 56778899999876 2222211100 00112
Q ss_pred CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH
Q 014769 292 IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA 371 (419)
Q Consensus 292 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll 371 (419)
.+.....++..++......++++..++++++++++.+.|++++++.++ .+..+ ++++..+. .+..++...|
T Consensus 355 ~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~~~-~~~~~~~~------~~~~~l~~~L- 425 (514)
T 3mad_A 355 RPGALSATAWAAMLSLGEEGYLDATRRILQAADRLKAGVRAIPSLKIL-GDPLW-VIAVASDE------LNIYQVMEEM- 425 (514)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTCEES-SCCSS-EEEEECSS------SCHHHHHHHH-
T ss_pred CchHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCCeEEe-CCCeE-EEEEeCCC------CCHHHHHHHH-
Confidence 232222233333332224677888899999999999999998888744 44444 56665532 2566777777
Q ss_pred HhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHHHHHhc
Q 014769 372 KEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 372 ~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.++||.+ +|..| ++++|+++. ++++++++++++|++++++..+
T Consensus 426 ~~~Gi~v-~g~~~--~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~~~~ 471 (514)
T 3mad_A 426 AGRGWRL-NGLHR--PPAFHVALTLRHTEPGVVDRFLADLQDAVAQVRA 471 (514)
T ss_dssp HTTTCBC-EEETT--TTEEEEECCGGGGSTTHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEe-ccCCC--CCeEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5569988 54433 578999985 4679999999999999987653
No 141
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.98 E-value=9.7e-31 Score=251.68 Aligned_cols=334 Identities=14% Similarity=0.104 Sum_probs=222.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC---------CCCHHHHHHHHHHHHhhCCCCCCCCcEEE
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN---------SGIPPARRAIADYLSRDLPYKLSADDVYV 112 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---------~g~~~lr~~ia~~l~~~~~~~~~~~~i~~ 112 (419)
.+++.|+.+.+. ++++.+++++.+.+... ..|+.. ....++|+++++++ ++++++|++
T Consensus 17 ~~~~~Ld~~~~~-----~~~~~v~~a~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~ 83 (432)
T 3a9z_A 17 NRKVYMDYNATT-----PLEPEVIQAVTEAMKEA--WGNPSSSYVAGRKAKDIINTARASLAKMI------GGKPQDIIF 83 (432)
T ss_dssp -CCEECBTTTCC-----CCCHHHHHHHHHHHHHC--CSCTTCSSHHHHHHHHHHHHHHHHHHHHH------TCCGGGEEE
T ss_pred CCcEEeeCCccC-----CCCHHHHHHHHHHHHHh--cCCCccCcHHHHHHHHHHHHHHHHHHHHc------CCCcCeEEE
Confidence 467888887643 56789999999887642 133331 11358999999988 567789999
Q ss_pred cccHHHHHHHHHHHhc--------CCCCeEEeeCCCCCCc-----------------HHHHhhcCCEEEEEeccCCCCcc
Q 014769 113 TLGCKQAVEVILSVLA--------RPGANVLLPRPGWPYY-----------------EGIAQRKQVEVRHFDLLPERNWE 167 (419)
Q Consensus 113 t~g~~~al~~~~~~l~--------~~gd~vlv~~p~~~~~-----------------~~~~~~~g~~~~~~~~~~~~~~~ 167 (419)
|+|+++++..++.++. ++||+|+++.|+|..+ ...++..|.+++.++++++ ++.
T Consensus 84 ~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~~~~~~~g~~v~~v~~~~~-~~~ 162 (432)
T 3a9z_A 84 TSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLEHLVEDQVAEVTFVPVSKV-NGQ 162 (432)
T ss_dssp ESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHHHHHHTTSCEEEEECCCTT-TSS
T ss_pred eCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHHHHHHhcCcEEEEEecCcc-cCC
Confidence 9999999999999986 5899999999999875 2334456899999987642 347
Q ss_pred cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC----------CeEEEcccccccccCCCCCCCccc
Q 014769 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR----------VMVVADEVYGHLTFGSIPYTPMGL 237 (419)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~----------~~li~De~~~~~~~~~~~~~~~~~ 237 (419)
+|++.|++++++++++|++++|+||||.+++ +++|.++|++++ +++|+|++|+.+. ....+..
T Consensus 163 ~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~l~~~~~~~~~~~~~~~~~livDea~~~~~----~~~~~~~ 235 (432)
T 3a9z_A 163 VEVEDILAAVRPTTCLVTIMLANNETGVIMP---ISEISRRIKALNQIRAASGLPRVLVHTDAAQALGK----RRVDVED 235 (432)
T ss_dssp CCHHHHHHTCCTTEEEEECCSBCTTTCBBCC---HHHHHHHHHHHHHHHHHHTCCCCEEEEECTTTTTT----SCCCHHH
T ss_pred cCHHHHHHhccCCceEEEEECcccCcccccC---HHHHHHHHHhcCcccccccCCceEEEEEchhhhCC----cccChhh
Confidence 8999999999888899999999999999999 678899999998 9999999997632 1222222
Q ss_pred cCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh--------hhccccCCchHHHHHHHHHHcccch
Q 014769 238 FGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD--------CLSIYSDIPTFIQGAIPQILEKTKE 309 (419)
Q Consensus 238 ~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~~~~~~~a~~~~l~~~~~ 309 (419)
.+.+ +++.|+||.+ |+|+||++++++.. ...++. .....++++...+.++.++++.. .
T Consensus 236 ~~~d---~~~~s~~K~~---g~~~G~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal~~~-~ 301 (432)
T 3a9z_A 236 LGVD---FLTIVGHKFY---GPRIGALYVRGVGK-------LTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAADLV-S 301 (432)
T ss_dssp HCCS---EEEEEGGGTT---CCSCEEEEETTBTT-------TBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHHHHH-H
T ss_pred cCCC---EEEEehhHhc---CCcceEEEEccccc-------cCCcCceeecCCccccccCCCcCHHHHHHHHHHHHHH-H
Confidence 2222 5688999985 45699999975320 111111 01113456777777777777643 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769 310 DFFCKLIDTLRESAEICYDGVKEIPCISCP-NKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 310 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
+++++..++++++++.+.+.|++++++.+. ..| ..+..+++.++... .+..++...+ .++.+.+|..
T Consensus 302 ~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l---~~i~~~~G~~ 374 (432)
T 3a9z_A 302 ENCETYEAHMRDIRDYLEERLEAEFGKRIHLNSRFPGVERLPNTCNFSIQGSQ----LRGYMVLAQC---QTLLASVGAS 374 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHGGGEEESSCCTTCCBCTTEEEEEECSTT----CCHHHHHHHC---SSEECBSSCG
T ss_pred hhHHHHHHHHHHHHHHHHHHHHhccCCcEEEeCCCCcccCCCCEEEEEeCCCC----CcHHHHHHHh---cCeEEecccc
Confidence 467888899999999999999875454311 112 12324444454310 1344454433 3677776654
Q ss_pred C---------------CC-----CCeEEEEeec--CHHHHHHHHHHHHHHHHHHhc
Q 014769 384 V---------------GL-----KNWLRIAFCA--EPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 384 ~---------------~~-----~~~~Ris~~~--~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+ +. .+++||+++. +++++++++++|+++++++.+
T Consensus 375 ~~~~~~~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~~~~ 430 (432)
T 3a9z_A 375 CHSDHEDRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQLEG 430 (432)
T ss_dssp GGGGGTTSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCCCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3 22 3799999964 899999999999999987643
No 142
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.97 E-value=1.4e-30 Score=251.90 Aligned_cols=352 Identities=12% Similarity=0.035 Sum_probs=227.3
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||+.|.+... .-..+|.+.+++.+++..... ....+..+.+..+++++.+..+ .+.+ |++|+|+++
T Consensus 46 ~~g~~~lD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~---~~~~~~~~~~~~la~~l~~~~~--~~~~-v~~~~ggse 118 (452)
T 3n5m_A 46 IQGKRYLDGMSGLWCVN-SGYGRKELAEAAYKQLQTLSY---FPMSQSHEPAIKLAEKLNEWLG--GEYV-IFFSNSGSE 118 (452)
T ss_dssp TTCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHTTCCC---CCTTSEEHHHHHHHHHHHHHHT--SCEE-EEEESSHHH
T ss_pred CCCCEEEECCcchhhcc-CCCCCHHHHHHHHHHHHhcCC---cccccCCHHHHHHHHHHHHhCC--CCce-EEEeCchHH
Confidence 35888999999843322 123479999999999876422 1222344566666666655444 3334 999999999
Q ss_pred HHHHHHHHhc-----C---CCCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCccc-C-------
Q 014769 119 AVEVILSVLA-----R---PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEV-D------- 169 (419)
Q Consensus 119 al~~~~~~l~-----~---~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~-~------- 169 (419)
+++.+++.++ . +++.|++.+|+|+++.......+.. ...++......... |
T Consensus 119 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (452)
T 3n5m_A 119 ANETAFKIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDV 198 (452)
T ss_dssp HHHHHHHHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGC
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHH
Confidence 9999999987 5 6799999999999876554444321 22333211000000 1
Q ss_pred --hHHHHHhhc----CCccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 170 --LDAVEALAD----KNTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 170 --~~~l~~~~~----~~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
+++|+++++ ++++++++..+ +| ||.++ +.+++++|.++|++||+++|+||+|.++.+.|... ....++..
T Consensus 199 ~~~~~le~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~-~~~~~~~~ 276 (452)
T 3n5m_A 199 ECVKEVDRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAF-GFMNYDVK 276 (452)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccc-hhhhcCCC
Confidence 788888886 34445555555 79 99766 88899999999999999999999999876655422 22223322
Q ss_pred CcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh------h-hccccCCchHHHHHHHHHHcccc-hHHH
Q 014769 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD------C-LSIYSDIPTFIQGAIPQILEKTK-EDFF 312 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~------~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~ 312 (419)
..++ +|||.++. | +|+||+++++ ++++.+.. . ...+++.+++++.++.++|+... ++.+
T Consensus 277 ~di~---t~sK~l~~-G~~~ig~~~~~~--------~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~ 344 (452)
T 3n5m_A 277 PDII---TMAKGITS-AYLPLSATAVKR--------EIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLI 344 (452)
T ss_dssp CSEE---EECGGGGT-TSSCCEEEEEEH--------HHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHH
T ss_pred CCEE---eecccccC-CCcceEEEEECH--------HHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHH
Confidence 2233 68999866 9 9999999976 57777643 1 22356778899988888887532 2233
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC--C--CCHHHHHHHHHHhcCeEeecCCCCCC--
Q 014769 313 CKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED--I--NDDIEFALKLAKEESVIVTPGIYVGL-- 386 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~--~--~~~~~~~~~ll~~~gv~v~~g~~~~~-- 386 (419)
++..+.....++.+.+.+..+|.+. . .+..|.++++.+....... . ....++...+ .++||.+.|+..|..
T Consensus 345 ~~~~~~~~~l~~~L~~~~~~~~~~~-~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~~~~~~~~~~~~ 421 (452)
T 3n5m_A 345 ERSAQMGSLLLEQLKEEIGEHPLVG-D-IRGKGLLVGIELVNDKETKEPIDNDKIASVVNAC-KEKGLIIGRNGMTTAGY 421 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCTTEE-E-EEESSSCEEEEEEEETTTTEECCHHHHHHHHHHH-HHTTEECEECTTSSTTC
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHH-HHCCcEEeecCcccCCC
Confidence 3333333444444444444454443 2 2334556666663211000 0 0023555555 567999999886633
Q ss_pred CCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769 387 KNWLRIAF--CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 387 ~~~~Ris~--~~~~~~l~~~l~~l~~~~~~ 414 (419)
.+++||++ ..+++++++++++|++++++
T Consensus 422 ~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 422 NNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp CCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 58999986 46899999999999998764
No 143
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.97 E-value=1.9e-30 Score=251.23 Aligned_cols=353 Identities=12% Similarity=0.020 Sum_probs=234.8
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||+.|.+... .-..+|.+.+++.+++..... .|....+..+.++++++++.+..+ .+.++|++|+|+++
T Consensus 47 ~~g~~ylD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~ggse 122 (459)
T 4a6r_A 47 SEGNKIIDGMAGLWCVN-VGYGRKDFAEAARRQMEELPF-YNTFFKTTHPAVVELSSLLAEVTP--AGFDRVFYTNSGSE 122 (459)
T ss_dssp TTCCEEEETTHHHHTCT-TCBCCHHHHHHHHHHHHHCSC-CCTTSSSCCHHHHHHHHHHHHHSC--TTCCEEEEESSHHH
T ss_pred CCCCEEEECCCchhccc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence 35788999998843321 112479999999999876432 344334555777777777777654 45679999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCC-------------EEEEEeccC--C-CCcccC-----
Q 014769 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV-------------EVRHFDLLP--E-RNWEVD----- 169 (419)
Q Consensus 119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~-------------~~~~~~~~~--~-~~~~~~----- 169 (419)
+++.+++.++. +++.|++.+|+|+++...+...+. .+..++... . .++ .|
T Consensus 123 A~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~d~~~~~ 201 (459)
T 4a6r_A 123 SVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQGDLPIPGMAHIEQPWWYKHGKD-MTPDEFG 201 (459)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC---CCSCSSEEEECCCCHHHHCTT-CCHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccccCCCCCCCEEeCCCccccCCcc-cCHHHHH
Confidence 99999999875 469999999999987655544422 223333211 0 111 23
Q ss_pred ---hHHHHHhhcC---CccEEEEeCCC-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 170 ---LDAVEALADK---NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 170 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
+++|++.+.. +..++++++|. |++|. +.+.+++++|.++|++||+++|+||+|.++.+.|..+ ....++..
T Consensus 202 ~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~G~~~-~~~~~~~~ 280 (459)
T 4a6r_A 202 VVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKYDVLLVADEVICGFGRTGEWF-GHQHFGFQ 280 (459)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-HHHHHTCC
T ss_pred HHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccc-hHhhcCCC
Confidence 6778877752 34566777775 45555 5699999999999999999999999999876665422 22222322
Q ss_pred CcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH---hh-hccccCCchHHHHHHHHHHcccc-hHHHHHHH
Q 014769 242 VPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK---DC-LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLI 316 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~---~~-~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~ 316 (419)
.+++ +|||.++.+|+|+||+++++ ++++.+. .. ...+++.+++++.++.++|+... ++.+++.+
T Consensus 281 pdi~---t~sK~l~gg~~~lg~v~~~~--------~i~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~ 349 (459)
T 4a6r_A 281 PDLF---TAAKGLSSGYLPIGAVFVGK--------RVAEGLIAGGDFNHGFTYSGHPVCAAVAHANVAALRDEGIVQRVK 349 (459)
T ss_dssp CSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHCTTHHHHHHCSCHHHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CCee---ehhhhhcCCCCCccceeeCH--------HHHHHhhcCCCcccCCCCCCCHHHHHHHHHHHHHHhcchHHHHHH
Confidence 2333 68899766559999999965 6777776 22 23356788999999888887532 23344444
Q ss_pred -HHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccccc--C----CCCHHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769 317 -DTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLE--D----INDDIEFALKLAKEESVIVTPGIYVGLKNW 389 (419)
Q Consensus 317 -~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~--~----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 389 (419)
+.....++.+.+.|.+++.+. . .+..|.++++.+...... . .....++...+ .++||.+.|+. ++
T Consensus 350 ~~~~~~~~~~l~~~l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~~ 421 (459)
T 4a6r_A 350 DDIGPYMQKRWRETFSRFEHVD-D-VRGVGMVQAFTLVKNKAKRELFPDFGEIGTLCRDIF-FRNNLIMRACG-----DH 421 (459)
T ss_dssp HTHHHHHHHHHHHHHTTCTTEE-E-EEEETTEEEEEECSBTTTTBCCSSTTHHHHHHHHHH-HHTTEECEEET-----TE
T ss_pred HHHHHHHHHHHHHHHhcCCCeE-E-EEEEEEEEEEEEecCccccccccchHHHHHHHHHHH-HHCCeEEecCC-----CE
Confidence 344444444545555555444 2 233455666666532100 0 00034566666 45699999873 79
Q ss_pred EEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 390 LRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 390 ~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+||++ ..+++++++++++|++++++..
T Consensus 422 iRi~~~~~~t~e~i~~~l~~l~~~l~~~~ 450 (459)
T 4a6r_A 422 IVSAPPLVMTRAEVDEMLAVAERCLEEFE 450 (459)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99996 5689999999999999998764
No 144
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.97 E-value=1.9e-31 Score=250.41 Aligned_cols=327 Identities=14% Similarity=0.079 Sum_probs=224.8
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---CCCCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KFNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
.+++|+.|. .++++.+++++.+.+... ....|.. ..+..++.+.+.+.+.+.+|.. ++++|++|+|+
T Consensus 3 ~~~~~~~g~------~~~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~-~~~~v~~~~g~ 75 (360)
T 1w23_A 3 QVFNFNAGP------SALPKPALERAQKELLNFNDTQMSVMELSHRSQSYEEVHEQAQNLLRELLQIP-NDYQILFLQGG 75 (360)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSHHHHHHHHHHHHHHHHHHTCC-TTEEEEEESSH
T ss_pred ceEeecCCC------cCCCHHHHHHHHHHhhhhccccccccccCCCCHHHHHHHHHHHHHHHHHhCCC-CCceEEEECCc
Confidence 467888774 256789999998887532 1111211 2232333344444444434432 35799999999
Q ss_pred -HHHHHHHHHHhcCC---CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH-hhcCCccEEEEeCCCC
Q 014769 117 -KQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA-LADKNTAAMVIINPGN 191 (419)
Q Consensus 117 -~~al~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~v~i~~p~n 191 (419)
++++..++..+..+ ||.|+++.++|.. ...++..| +++.++++++++ .+|++++++ ++++++++|++++|+|
T Consensus 76 gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~-~~~~~~~g-~~~~v~~~~~~~-~~d~~~l~~~~i~~~~k~v~~~~~~n 152 (360)
T 1w23_A 76 ASLQFTMLPMNLLTKGTIGNYVLTGSWSEKA-LKEAKLLG-ETHIAASTKANS-YQSIPDFSEFQLNENDAYLHITSNNT 152 (360)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEEECSHHHHHH-HHHHHTTS-EEEEEEECGGGT-SCSCCCGGGCCCCTTEEEEEEESEET
T ss_pred chHHHHHHHHHhcCCCCcccEEEecchhHHH-HHHHHHhC-CeEEeecccccC-cCCccchHhhccCCCCCEEEEeCCCC
Confidence 99999999998865 5667777666654 33456779 999998864333 378888988 8887899999999999
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCC
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNG 271 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~ 271 (419)
|||.+++ ++. +++|+++|+|++|+.+.. ..++..+ .++++|+||.++.+| +||+++++
T Consensus 153 ptG~~~~--~i~------~~~~~~li~D~a~~~~~~----~~~~~~~-----di~~~s~sK~~~~~G--~G~~~~~~--- 210 (360)
T 1w23_A 153 IYGTQYQ--NFP------EINHAPLIADMSSDILSR----PLKVNQF-----GMIYAGAQKNLGPSG--VTVVIVKK--- 210 (360)
T ss_dssp TTTEECS--SCC------CCCSSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTSCTT--CEEEEEEH---
T ss_pred Ccceecc--ccc------ccCCceEEEechhhcCCC----CcCcccC-----CEEEEEcccccCCCC--cEEEEEcH---
Confidence 9999987 232 389999999999987432 1123222 278899999988666 99999875
Q ss_pred ccchhhHHHHHHhhh-------------ccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCC-
Q 014769 272 IFQKSGIIDSIKDCL-------------SIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCI- 336 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~-------------~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~- 336 (419)
++++.++... ....+++...+.++..+++..... ++++..++++++++.+.+.|++++++
T Consensus 211 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~ 285 (360)
T 1w23_A 211 -----DLLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAKIIYDTIDESNGFY 285 (360)
T ss_dssp -----HHHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTTTSS
T ss_pred -----HHHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHccCcc
Confidence 3333332211 112355666666676666643223 67888999999999999999988654
Q ss_pred CCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 337 SCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 337 ~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
.....| .+++++|+.++.. .+..++..+| .++||.+.||..+ .+++|++++ .+++++++++++|++++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~l-~~~gi~~~~~~~~--~~~iRis~~~~~~~~~i~~~~~~l~~~~ 357 (360)
T 1w23_A 286 VGHAEKGSRSLMNVTFNLRNE-----ELNQQFLAKA-KEQGFVGLNGHRS--VGGCRASIYNAVPIDACIALRELMIQFK 357 (360)
T ss_dssp EESSCGGGBCSSEEEEECSSH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred cccCCchhccCcEEEEEcCCC-----ccHHHHHHHH-HHCCeeeecCCCC--CCeEEEEecCCCCHHHHHHHHHHHHHHH
Confidence 311123 2456889888642 1245666665 6689999988754 678999996 58899999999999887
Q ss_pred HH
Q 014769 413 QR 414 (419)
Q Consensus 413 ~~ 414 (419)
++
T Consensus 358 ~~ 359 (360)
T 1w23_A 358 EN 359 (360)
T ss_dssp HH
T ss_pred hh
Confidence 64
No 145
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.97 E-value=7.4e-31 Score=252.61 Aligned_cols=350 Identities=12% Similarity=0.016 Sum_probs=224.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.++||+.|...... -..+|.+.+++.+++.......|+. ....++++++++++ + ++++|++++|++++
T Consensus 53 ~g~~ylD~~~~~~~~~l-G~~~p~v~~a~~~~~~~~~~~~~~~-~~~~~l~~~la~~~------~-~~~~v~~~~sGsea 123 (434)
T 3l44_A 53 DGNKYIDYLAAYGPIIT-GHAHPHITKAITTAAENGVLYGTPT-ALEVKFAKMLKEAM------P-ALDKVRFVNSGTEA 123 (434)
T ss_dssp TCCEEEECCGGGTTCSS-CBTCHHHHHHHHHHHHHCSCCSSCC-HHHHHHHHHHHHHC------T-TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhcccc-CCCCHHHHHHHHHHHHhCcCCCCCC-HHHHHHHHHHHHhC------C-CCCEEEEeCchHHH
Confidence 58889999988643221 1258999999999987654334543 34567777777765 2 57899999999999
Q ss_pred HHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCE-EEEEeccCCCCc--------c----cChHHHHHhhcC--Ccc
Q 014769 120 VEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVE-VRHFDLLPERNW--------E----VDLDAVEALADK--NTA 182 (419)
Q Consensus 120 l~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~-~~~~~~~~~~~~--------~----~~~~~l~~~~~~--~~~ 182 (419)
++.+++.+.. +++.|++.+|+|+++...+...+.. ..........+. . -|+++|+++++. ...
T Consensus 124 ~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 203 (434)
T 3l44_A 124 VMTTIRVARAYTGRTKIMKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPQSIAQEVITVPFNNVETLKEALDKWGHEV 203 (434)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSGGGGBC-------CCCBSSTTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGE
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCcHHHHhhcCCcccccCCCCcCCCCCcCCCceEecCcccHHHHHHHHHhCCCCE
Confidence 9999998765 6799999999999865544433321 111111000000 0 178889888763 334
Q ss_pred EEEEeCCC-CccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 183 AMVIINPG-NPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 183 ~v~i~~p~-nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
.+++++|+ |++|.+. +.+++++|.++|++||+++|+||+|.++ ..+... ....++.... +.||||.++ +|+|
T Consensus 204 ~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G~~ 277 (434)
T 3l44_A 204 AAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAF-RFMYGG-AQDLLGVTPD---LTALGKVIG-GGLP 277 (434)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTT-TSSSSC-HHHHHTCCCS---EEEEEGGGG-TTSS
T ss_pred EEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccce-eccccH-HHHHcCCCCC---eeehhhhhc-CCcC
Confidence 56666665 5556554 8999999999999999999999999987 444321 1122222222 337899986 7999
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+||+++++ ++++.+... ...+++.+++++.++.++++... ++.+++..+.....++.+.+.+..++.
T Consensus 278 iG~~~~~~--------~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 349 (434)
T 3l44_A 278 IGAYGGKK--------EIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGLYEKLDELGATLEKGILEQAAKHNI 349 (434)
T ss_dssp CEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eeeEEEcH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99998865 566666542 22356778888888888887432 233333333333333333333333422
Q ss_pred CCCCCCCCceEEEEeecCccccc--------CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLE--------DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGR 407 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~ 407 (419)
.. . .+..|.++++.+...... ......++...+ .++||.+.|+. .+++|+++..+++++++++++
T Consensus 350 ~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~rl~~~~t~e~i~~~l~~ 422 (434)
T 3l44_A 350 DI-T-LNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLM-LQEGVNLAPSK----YEAWFLTTEHTKEDIEYTIEA 422 (434)
T ss_dssp CE-E-EEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHH-HHTTEECCSST----TCCEECCTTCCHHHHHHHHHH
T ss_pred CE-E-EEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHH-HHCCeEEeecC----CCcEEEecccCHHHHHHHHHH
Confidence 22 2 234456666666321100 000124555555 55799999875 357899888899999999999
Q ss_pred HHHHHHHHhccC
Q 014769 408 MKAFCQRHTKKH 419 (419)
Q Consensus 408 l~~~~~~~~~~~ 419 (419)
|+++++++.++|
T Consensus 423 l~~~l~~~~~~~ 434 (434)
T 3l44_A 423 VGRAFAALADNK 434 (434)
T ss_dssp HHHHHHHHHHC-
T ss_pred HHHHHHHHHhcC
Confidence 999999876543
No 146
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=99.97 E-value=1.4e-29 Score=240.82 Aligned_cols=317 Identities=14% Similarity=0.101 Sum_probs=213.4
Q ss_pred eccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC--CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHH
Q 014769 46 PLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVI 123 (419)
Q Consensus 46 ~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~ 123 (419)
.++.|+|...+.....+++.+++...........|+ +..+..++++.+++++ +.+ ++++++++++++..+
T Consensus 24 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~--~~i~~~sG~~a~~~~ 95 (398)
T 2rfv_A 24 TGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLE------RGE--AGLATASGISAITTT 95 (398)
T ss_dssp TCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHH------TCS--EEEEESSHHHHHHHH
T ss_pred CCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHh------CCC--cEEEECCHHHHHHHH
Confidence 577777653333334455555544111111112343 3345678888888877 332 566666677999999
Q ss_pred HHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 124 LSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 124 ~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
+.++.++||+|+++.|+|+++...+ ...|.+++.++.+ |++.+++++++++++|++++|+||||.+++
T Consensus 96 l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~- 167 (398)
T 2rfv_A 96 LLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAA-------KPEEIRAAMRPETKVVYIETPANPTLSLVD- 167 (398)
T ss_dssp HHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTT-------SHHHHHHHCCTTEEEEEEESSBTTTTBCCC-
T ss_pred HHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHhcCCCCeEEEEECCCCCCCcccC-
Confidence 9999999999999999999877665 7789998888752 789999999888999999999999999998
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhH
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~ 278 (419)
+++|.++|+++|+++|+|++|+.+.+.. ++ .+ +..+++.|+||.++++|.|+ ||+++++ ++
T Consensus 168 --l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~---~~di~~~s~sK~~~~~g~~~~G~~~~~~--------~~ 229 (398)
T 2rfv_A 168 --IETVAGIAHQQGALLVVDNTFMSPYCQQ----PL-QL---GADIVVHSVTKYINGHGDVIGGIIVGKQ--------EF 229 (398)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG---TCSEEEEETTTTTTCSSCCCCEEEEECH--------HH
T ss_pred --HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh---CCcEEEEeCcccccCCCCceEEEEEECH--------HH
Confidence 9999999999999999999999765431 11 22 24588999999999999998 9999865 45
Q ss_pred HH-HHHhhhc-c-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC--------------CCCCCCC
Q 014769 279 ID-SIKDCLS-I-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP--------------CISCPNK 341 (419)
Q Consensus 279 ~~-~l~~~~~-~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~--------------~~~~~~~ 341 (419)
++ .++.... . +.+.++..+.++..+++. +....++..++.+.+.+.|++.+ ++.+. .
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 303 (398)
T 2rfv_A 230 IDQARFVGLKDITGGCMSPFNAWLTLRGVKT-----LGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELG-Q 303 (398)
T ss_dssp HHHHHHTHHHHTTCCCCCHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-H
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHH-H
Confidence 54 5554432 2 356788888888888864 22333344555566666665532 22211 1
Q ss_pred C---CceEEEEeecCcccccCCCCHHHHHHHHHHh---cCeEeecCCCCC----------------------C-CCeEEE
Q 014769 342 P---EGSMVTMVKLNPWLLEDINDDIEFALKLAKE---ESVIVTPGIYVG----------------------L-KNWLRI 392 (419)
Q Consensus 342 p---~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~---~gv~v~~g~~~~----------------------~-~~~~Ri 392 (419)
| ..|.++++.++. ..+....++++ .|+.+.+|..|. . ++++|+
T Consensus 304 ~~~~~~g~~~~~~~~~--------~~~~~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRl 375 (398)
T 2rfv_A 304 RQMSLPGGIISFEIAG--------GLEAGRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRL 375 (398)
T ss_dssp HHCSSCCSEEEEEETT--------HHHHHHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEE
T ss_pred hhCCCCceEEEEEEcC--------CHHHHHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEE
Confidence 1 234455667763 11222334343 378888886542 1 579999
Q ss_pred Eeec--CHHHHHHHHHHHHH
Q 014769 393 AFCA--EPSALKDGLGRMKA 410 (419)
Q Consensus 393 s~~~--~~~~l~~~l~~l~~ 410 (419)
|++. ++++++.+++.|++
T Consensus 376 s~~~~~~~~~i~~l~~al~~ 395 (398)
T 2rfv_A 376 SVGLEDPEDIINDLEHAIRK 395 (398)
T ss_dssp ECCSSCHHHHHHHHHHHHHH
T ss_pred EecCCCHHHHHHHHHHHHHh
Confidence 9964 45666666666654
No 147
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.97 E-value=3.8e-30 Score=250.03 Aligned_cols=347 Identities=15% Similarity=0.138 Sum_probs=230.1
Q ss_pred CCCeeeccCCCCCC--CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 41 PRPVVPLGYGDPTA--FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 41 ~~~~i~l~~g~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
+.++++|+.|.+-. .+.++. +.+.+++.+.+..+. ..|.++.+..++|+++++++. .++|++|+|+++
T Consensus 33 g~~~~~~~~g~~ylD~~~~~~~-~~v~~a~~~~~~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~ggt~ 102 (467)
T 1ax4_A 33 GYNPFLLPSSAVYIDLLTDSGT-NAMSDHQWAAMITGD-EAYAGSRNYYDLKDKAKELFN--------YDYIIPAHQGRG 102 (467)
T ss_dssp TSCGGGSCGGGCSEECSCSSSC-CCEEHHHHHHHHTCC-CCSSSCHHHHHHHHHHHHHHC--------CCEEEEESSHHH
T ss_pred CcCcccCCCCceeeecccCcCC-HHHHHHHHHHHhhcc-cccccCccHHHHHHHHHHHcC--------CCcEEEcCCcHH
Confidence 55666666664310 011222 566677777665543 368777788999999999982 368999999999
Q ss_pred HHHHHHHHhcC----CCCe---EEeeCCCCCCcHHHHhhcCCEEEEEeccC---C-----CCcccChHHHHHhhcC----
Q 014769 119 AVEVILSVLAR----PGAN---VLLPRPGWPYYEGIAQRKQVEVRHFDLLP---E-----RNWEVDLDAVEALADK---- 179 (419)
Q Consensus 119 al~~~~~~l~~----~gd~---vlv~~p~~~~~~~~~~~~g~~~~~~~~~~---~-----~~~~~~~~~l~~~~~~---- 179 (419)
|++.++.+++. +||. |+++.+.|..+...+...|..++.++... . .++.+|++.|++++++
T Consensus 103 A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~ 182 (467)
T 1ax4_A 103 AENILFPVLLKYKQKEGKAKNPVFISNFHFDTTAAHVELNGCKAINIVTEKAFDSETYDDWKGDFDIKKLKENIAQHGAD 182 (467)
T ss_dssp HHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHHHHHHHTTCEEEECBCGGGGCTTSCCTTTTCBCHHHHHHHHHHHCGG
T ss_pred HHHHHHHHHHHhhccCCCccceEEEeccccchhhHHHhccCCceecccccccccccccCCcccccCHHHHHHHHHhcCCC
Confidence 99999999988 9998 99986666666667788888877665421 1 1346899999998874
Q ss_pred CccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccc--c--------ccCCCCCCCccccC----CCCcE
Q 014769 180 NTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGH--L--------TFGSIPYTPMGLFG----SIVPV 244 (419)
Q Consensus 180 ~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~--~--------~~~~~~~~~~~~~~----~~~~~ 244 (419)
++++|++++|+||| |.+++.+++++|.++|++||+++|+|+++.. . .+.+.. +..+. ....
T Consensus 183 ~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~d- 258 (467)
T 1ax4_A 183 NIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENAYFIKARDPKYKNAT---IKEVIFDMYKYAD- 258 (467)
T ss_dssp GEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHHHHHCGGGTTCC---HHHHHHHHGGGCS-
T ss_pred CeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcchhccccccccCCCc---hhhhhhhhccccc-
Confidence 57889999999999 8999999999999999999999999998653 1 122221 11111 0111
Q ss_pred EEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhc------cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 245 ITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLS------IYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 245 i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
+++.|+||.++++ | |+++++++. ++++.+..... ...+.+.....++...++.... ++..+
T Consensus 259 ~~~~s~sK~~g~~~G---g~~~~~d~~------~l~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~---~~~~~ 326 (467)
T 1ax4_A 259 ALTMSAKKDPLLNIG---GLVAIRDNE------EIFTLARQRCVPMEGFVTYGGLAGRDMAAMVQGLEEGTE---EEYLH 326 (467)
T ss_dssp EEEEETTSTTCCSSC---EEEEESSCH------HHHHHHHHHHHHHTCSTTTTTCCHHHHHHHHHHHHHTTC---HHHHH
T ss_pred eEEEeccccCCCCcc---eEEEeCCHH------HHHHHHHhhccccccccccCCccchHHHHHHHHHHHhhh---hhHHH
Confidence 4567999997665 3 677665320 24554443321 1122233333333334443221 11222
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCccc--cc-CCCCHHHHHHHHHHhcCeEeec-CCCC-------C-
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL--LE-DINDDIEFALKLAKEESVIVTP-GIYV-------G- 385 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~-~~~~~~~~~~~ll~~~gv~v~~-g~~~-------~- 385 (419)
+..++++.+.+.|++ +++. +..|.+|+++|+.+.... .. ...+..+++..|+.++||.+.| |..+ +
T Consensus 327 ~~~~~~~~l~~~L~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~v~~~g~~~~~~~~~~g~ 404 (467)
T 1ax4_A 327 YRIGQVKYLGDRLRE-AGIP-IQYPTGGHAVFVDCKKLVPQIPGDQFPAQAVINALYLESGVRAVEIGSFLLGRDPATGE 404 (467)
T ss_dssp HHHHHHHHHHHHHHH-TTCC-BCSSCCSSEEEEESTTTCTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHh-CCCC-cccCCCceEEEEehhhhccccccCCCCHHHHHHHHHHhcCceeeecCcccccccccccc
Confidence 333566778888877 3777 337888999999832100 00 0013567777776888999999 5431 1
Q ss_pred ----CCCeEEEEee---cCHHHHHHHHHHHHHHHHHH
Q 014769 386 ----LKNWLRIAFC---AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 386 ----~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~ 415 (419)
..+++||++. .+++++++++++|++++++.
T Consensus 405 ~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~~ 441 (467)
T 1ax4_A 405 QKHADMEFMRLTIARRVYTNDHMDYIADALIGLKEKF 441 (467)
T ss_dssp BCCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTHHHH
T ss_pred ccccccceEEEecccccCCHHHHHHHHHHHHHHHHhh
Confidence 1379999996 68999999999999998774
No 148
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.97 E-value=4.6e-31 Score=247.98 Aligned_cols=325 Identities=13% Similarity=0.089 Sum_probs=227.7
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCC-c-EEE
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYATNSGIPPARRAIADYLSRDLPYKLSAD-D-VYV 112 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~-~-i~~ 112 (419)
.+++++.|. .++++.+++++.+.+.+.. ...|.+ +..++++.+.+.+.+.+|. +++ + +++
T Consensus 4 ~~~l~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~--~~~~~~i~~ 73 (362)
T 2c0r_A 4 RAYNFNAGP------AALPLEVLERAQAEFVDYQHTGMSIMEMSHRGA--VYEAVHNEAQARLLALLGN--PTGYKVLFI 73 (362)
T ss_dssp CCEECCSSS------CCCCHHHHHHHHHTSSSSTTSSSCGGGSCTTSH--HHHHHHHHHHHHHHHHTTC--CSSEEEEEE
T ss_pred ceeeccCCC------CCCCHHHHHHHHHHHhhhhhcCccccccCCCcH--HHHHHHHHHHHHHHHHhCC--CCCcEEEEE
Confidence 466777773 4678999999988775320 011211 2345677777777776664 343 5 578
Q ss_pred cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCc--ccChHHHHHhhcCCccEEEEeC
Q 014769 113 TLGCKQAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNW--EVDLDAVEALADKNTAAMVIIN 188 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~v~i~~ 188 (419)
|+|++++++.++.+++++||+|+++++.++.. ...++..| +++.++++++.++ .+|.++++ +++++++|++++
T Consensus 74 t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~~~~--i~~~t~~v~~~~ 150 (362)
T 2c0r_A 74 QGGASTQFAMIPMNFLKEGQTANYVMTGSWASKALKEAKLIG-DTHVAASSEASNYMTLPKLQEIQ--LQDNAAYLHLTS 150 (362)
T ss_dssp SSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHHHHHHHHS-CEEEEEECGGGTTCSCCCGGGCC--CCTTEEEEEEES
T ss_pred CCCchHHHHHHHHhcCCCCCeEEEEecCcHhHHHHHHHHHhC-CeEEEecccccccccCCCHHHcc--cCCCcCEEEEeC
Confidence 89999999999999999999999887765543 35667779 9988887632222 34655543 566889999999
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
|+||||..++ ++++| +|+++|+|++|+.+.. ...+..+ .+++.|+||+++++| +||+++++
T Consensus 151 ~~n~tG~~~~--~l~~i------~~~~vivD~a~~~~~~----~~~~~~~-----d~~~~s~~K~~g~~G--~G~l~~~~ 211 (362)
T 2c0r_A 151 NETIEGAQFK--AFPDT------GSVPLIGDMSSDILSR----PFDLNQF-----GLVYAGAQKNLGPSG--VTVVIVRE 211 (362)
T ss_dssp EETTTTEECS--SCCCC------TTSCEEEECTTTTTSS----CCCGGGC-----SEEEEETTTTTCCSS--CEEEEEEG
T ss_pred CcCccceecc--ccccc------CCCEEEEEChhhccCC----ccchhHC-----cEEEEeccccccCcC--cEEEEEcH
Confidence 9999999743 25555 7999999999986432 1222222 277789999998788 99999976
Q ss_pred CCCccchhhHHHHHHh-------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 269 PNGIFQKSGIIDSIKD-------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~-------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
+ +++.+.. .....++++...+.++..+++..... .+++.+++++++++.+.+.|++++
T Consensus 212 ~--------~~~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~ 283 (362)
T 2c0r_A 212 D--------LVAESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKASLIYDAIDQSG 283 (362)
T ss_dssp G--------GSSSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred H--------HHhhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 2 2221111 11224577888888888888753333 688889999999999999999884
Q ss_pred CC-CCCCCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHH
Q 014769 335 CI-SCPNKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMK 409 (419)
Q Consensus 335 ~~-~~~~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~ 409 (419)
++ .+...+ .++.++++.++.. .+..+++..| .++||.+.||..+ .+++|+|++ .++++++++++.|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~L-~~~gi~~~~g~~~--~~~iRis~~~~~~~e~i~~l~~~l~ 355 (362)
T 2c0r_A 284 GFYRGCVDVDSRSDMNITFRLASE-----ELEKEFVKAS-EQEGFVGLKGHRS--VGGLRASIYNAVPYESCEALVQFME 355 (362)
T ss_dssp TSSEESSCGGGBCSSEEEEECSCH-----HHHHHHHHHH-HHTTEESCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHH
T ss_pred CccccCCChHHcCCcEEEEEcCCc-----chHHHHHHHH-HHCCCeeccCCCC--CCEEEEECCCCCCHHHHHHHHHHHH
Confidence 35 422222 2345677777631 1356677665 6779999888765 467999996 47999999999999
Q ss_pred HHHHHH
Q 014769 410 AFCQRH 415 (419)
Q Consensus 410 ~~~~~~ 415 (419)
++++++
T Consensus 356 ~~~~~~ 361 (362)
T 2c0r_A 356 HFKRSR 361 (362)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 998765
No 149
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=248.43 Aligned_cols=331 Identities=13% Similarity=0.080 Sum_probs=244.2
Q ss_pred CChHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-----C
Q 014769 59 RTAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-----P 130 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-----~ 130 (419)
+.++.+.+++.+++... ....|....|..++++.+++++.+.+|...+++++++++|+++++..++.++++ +
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~ 154 (497)
T 3mc6_A 75 HGGDDLIHLQTIAYEKYCVANQLHPDVFPAVRKMESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHR 154 (497)
T ss_dssp CCCHHHHHHHHHHHHHTSSCBTTCTTTCHHHHHHHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHS
T ss_pred CCchHHHHHHHHHHHHHhhcCCCCcccChHHHHHHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcC
Confidence 34477777777776542 223455566778999999999999888776788999999999999999999865 5
Q ss_pred C---CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769 131 G---ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (419)
Q Consensus 131 g---d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~ 207 (419)
| |+|+++.|+|..+...+...|.+++.+++++ .++.+|+++|++++++++++|++++|+||||.+.+ +++|.+
T Consensus 155 g~~~~~Vi~~~~~h~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~---l~~i~~ 230 (497)
T 3mc6_A 155 GITEPEIIAPVTAHAGFDKAAYYFGMKLRHVELDP-TTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADD---IEGLGK 230 (497)
T ss_dssp CCSSCEEEEETTSCHHHHHHHHHSCCEEEEECBCT-TTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCS---CTTTTT
T ss_pred CCCCceEEEeCCccHHHHHHHHHcCCeEEEEecCc-ccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCC---HHHHHH
Confidence 6 8999999999999999999999999998764 35689999999999988999999999999999988 889999
Q ss_pred HHHhCCCeEEEcccccccccC-----CCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHH
Q 014769 208 MARKLRVMVVADEVYGHLTFG-----SIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDS 281 (419)
Q Consensus 208 ~~~~~~~~li~De~~~~~~~~-----~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~ 281 (419)
+|+++|+++|+|++|+.+... +.+.. ++ .....+..+++.|++|. +.+|.++|++++++ +....
T Consensus 231 la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~~-~~~~~g~d~~~~s~~K~-l~~~~~~g~~~~~~--------~~~~~ 300 (497)
T 3mc6_A 231 IAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPLL-DFRVPGVTSISCDTHKY-GFAPKGSSVIMYRN--------SDLRM 300 (497)
T ss_dssp HHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCCC-STTSTTCCEEEEETTTT-TCCCSSCEEEECSS--------HHHHT
T ss_pred HHHHhCCEEEEECcchhhhhhhhhhhcccCCccc-cccCCCCcEEEECchhh-cCCCCCceeEEecC--------HHHHh
Confidence 999999999999999865321 11111 11 11122234778899997 57788899999876 23322
Q ss_pred HHhhhccc------------cCCc---hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCCce
Q 014769 282 IKDCLSIY------------SDIP---TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPEGS 345 (419)
Q Consensus 282 l~~~~~~~------------~~~~---~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~~g 345 (419)
........ ++.+ ..++.++...+. ...+++..++..++++++.+.|++ +|++.++..|..+
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~---~~~~~~~~~~~~~~~~~l~~~L~~~~~g~~~~~~~~~~ 377 (497)
T 3mc6_A 301 HQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMG---ENGYIESCQEIVGAAMKFKKYIQENIPDLDIMGNPRYS 377 (497)
T ss_dssp TTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTTCEECSCCCSS
T ss_pred hhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEecCCCee
Confidence 21111000 0111 223444444443 466788888999999999999998 6898855455555
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee-cCHHHHHHHHHHHHHHHHHHhc
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC-AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~-~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
++.| ..+. .+..++...| .++||.+.++.. +..+|+++. .++++++++++.|++++++..+
T Consensus 378 ~v~~-~~~~------~~~~~l~~~L-~~~Gi~v~~~~~---~~~~ri~~~~~t~e~i~~~~~~L~~~l~~~~~ 439 (497)
T 3mc6_A 378 VISF-SSKT------LNIHELSDRL-SKKGWHFNALQK---PVALHMAFTRLSAHVVDEICDILRTTVQELKS 439 (497)
T ss_dssp EEEE-ECTT------TTHHHHHHHH-HTTTCBCEECCS---SCCEEEECCTTTTCTHHHHHHHHHHHHHHHTC
T ss_pred EEEE-eCCC------CCHHHHHHHH-HhCCEEEecCCC---CCeEEEEEeCCCHHHHHHHHHHHHHHHHHHHh
Confidence 5544 4432 2466777776 556999877543 347899985 5789999999999999987754
No 150
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.97 E-value=4e-29 Score=239.27 Aligned_cols=329 Identities=17% Similarity=0.177 Sum_probs=226.9
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEee
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLP 137 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~ 137 (419)
+.++.+.+++.+.+.......|++..|..++++.+.+.+.+.+|. + ++++++++++++..++.++ .++||+|+++
T Consensus 13 ~~~~~~~~a~~~~~~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~--~--~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~ 88 (418)
T 2c81_A 13 QHSDRTRRKIEEVFQSNRWAISGYWTGEESMERKFAKAFADFNGV--P--YCVPTTSGSTALMLALEALGIGEGDEVIVP 88 (418)
T ss_dssp CCCHHHHHHHHHHHHHTCCSTTSBCCSSCCHHHHHHHHHHHHHTC--S--EEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CCCHHHHHHHHHHHhcCCccccCcccCCHHHHHHHHHHHHHHhCC--C--cEEEeCCHHHHHHHHHHHcCCCCcCEEEEC
Confidence 347899999999987665545877778544444444444443332 2 5677777899999999999 8899999999
Q ss_pred CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
.|+|.++...+...|.+++.+++++ .++.+|++.+++++++++++|++ +||||...+ +++|.++|+++|+++|
T Consensus 89 ~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~---~~~i~~~~~~~~~~li 161 (418)
T 2c81_A 89 SLTWIATATAVLNVNALPVFVDVEA-DTYCIDPQLIKSAITDKTKAIIP---VHLFGSMAN---MDEINEIAQEHNLFVI 161 (418)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCC---HHHHHHHHHHTTCEEE
T ss_pred CCccHhHHHHHHHcCCEEEEEecCC-CCCCcCHHHHHHhhCCCCeEEEE---eCCcCCccc---HHHHHHHHHHCCCEEE
Confidence 9999999999999999999998754 35789999999999877777765 458999877 8999999999999999
Q ss_pred Ecccccccc-cCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-----
Q 014769 218 ADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY----- 289 (419)
Q Consensus 218 ~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~----- 289 (419)
+|++|+.+. +++.. +..+. .+.+.|| ||.++. | |+||++++++ ++++.++......
T Consensus 162 ~D~a~~~~~~~~~~~---~~~~~----~~~~~s~s~~K~~~~-g-~~g~~~~~~~-------~l~~~~~~~~~~~~~~~~ 225 (418)
T 2c81_A 162 EDCAQSHGSVWNNQR---AGTIG----DIGAFSCQQGKVLTA-G-EGGIIVTKNP-------RLFELIQQLRADSRVYCD 225 (418)
T ss_dssp EECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCS-S-SCEEEEESCH-------HHHHHHHHHHBTTEEECS
T ss_pred EECcccccCccCCEe---ccccc----ceEEEeccCCcccCC-C-CeEEEEECCH-------HHHHHHHHHHHhCccccc
Confidence 999999875 54422 12222 1667777 999876 7 9999998542 4666665432210
Q ss_pred --------cC--C---c--------hHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-eEE
Q 014769 290 --------SD--I---P--------TFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG-SMV 347 (419)
Q Consensus 290 --------~~--~---~--------~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~-g~~ 347 (419)
+. . . ...+.++.. .. .+.+++..++.+++++.+.+.|.++|++.+...|.+ +..
T Consensus 226 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~--~~--l~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~ 301 (418)
T 2c81_A 226 DSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILL--DQ--LQELDDKNAIREKNAMFLNDALSKIDGIKVMKRPPQVSRQ 301 (418)
T ss_dssp CGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHH--HH--HTTHHHHHHHHHHHHHHHHHHHTTSTTEEECCCCTTEEEC
T ss_pred cccccccchhhccccccccCcCCCcCHHHHHHHH--HH--HHHHHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCCccc
Confidence 00 0 0 111222211 11 123566677777788899999988888773324555 333
Q ss_pred EE----eecCcccccCCCCHHHHHHHHHHhcCeE---eecCCCCC----------------------------C------
Q 014769 348 TM----VKLNPWLLEDINDDIEFALKLAKEESVI---VTPGIYVG----------------------------L------ 386 (419)
Q Consensus 348 ~~----~~~~~~~~~~~~~~~~~~~~ll~~~gv~---v~~g~~~~----------------------------~------ 386 (419)
.| +.++.....+ .+..++...|.+++||. +.++.... .
T Consensus 302 ~~~~~~~~~~~~~~~~-~~~~~l~~~L~~~~gI~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (418)
T 2c81_A 302 TYYGYVFRFDPVKFGG-LNADQFCEILREKLNMGTFYLHPPYLPVHKNPLFCPWTKNRYLKSVRKTEAYWRGLHYPVSER 380 (418)
T ss_dssp CCSEEEEEECGGGTTT-CCHHHHHHHHHHHHTCCTTTEECCCCCGGGCTTCCGGGCTTSCHHHHCCHHHHHTCCCHHHHH
T ss_pred ccEEEEEEEccccccc-cCHHHHHHHHHHcCCCCcccccccccccccCchhcccccccccccccccccccccCCChHHHH
Confidence 22 5665310001 24677877775545999 88775220 0
Q ss_pred --CCeEEEEe--ec-CHHHHHHHHHHHHHHHHHHhccC
Q 014769 387 --KNWLRIAF--CA-EPSALKDGLGRMKAFCQRHTKKH 419 (419)
Q Consensus 387 --~~~~Ris~--~~-~~~~l~~~l~~l~~~~~~~~~~~ 419 (419)
.+.+||++ .. ++++++.+++.|+++++++..+|
T Consensus 381 ~~~~~lrl~~~~~~gt~edi~~~~~~l~~~~~~~~~~~ 418 (418)
T 2c81_A 381 ASGQSIVIHHAILLAEPSHLSLLVDAVAELARKFCVTH 418 (418)
T ss_dssp HHHHEEEEEGGGGGSCHHHHHHHHHHHHHHHHTTC---
T ss_pred HHhCEEEecCCccCCCHHHHHHHHHHHHHHHHhhccCC
Confidence 14899999 46 89999999999999998877665
No 151
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.97 E-value=2.3e-30 Score=249.87 Aligned_cols=353 Identities=15% Similarity=0.030 Sum_probs=230.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.++||..|.+... .-..+|.+.+++.+++.... .|....+..+.+.++++++.+..+. ...++|++|+|+++|
T Consensus 59 ~g~~ylD~~~~~~~~~-lGh~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~~-~~~~~v~~~~sGseA 134 (451)
T 3oks_A 59 DGNRLIDLGSGIAVTT-VGNSAPKVVEAVRSQVGDFT--HTCFMVTPYEGYVAVCEQLNRLTPV-RGDKRSALFNSGSEA 134 (451)
T ss_dssp TSCEEEESSHHHHTCT-TCTTCHHHHHHHHHHHTTCS--CCTTTTSCCHHHHHHHHHHHHHSSC-CSSEEEEEESSHHHH
T ss_pred CCCEEEEcCCCccccc-cCCCCHHHHHHHHHHHHhcc--cccCCccCCHHHHHHHHHHHHhCCc-CCCCEEEEeCcHHHH
Confidence 4777899998844321 11247999999999987642 4554456667888888888776552 235799999999999
Q ss_pred HHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCC--------CCcc---cChHH
Q 014769 120 VEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPE--------RNWE---VDLDA 172 (419)
Q Consensus 120 l~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~--------~~~~---~~~~~ 172 (419)
++.+++.+.. .++.|++.+++|+++...+...+. .+..++.... +... .+++.
T Consensus 135 ~~~Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 214 (451)
T 3oks_A 135 VENAVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKR 214 (451)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHH
Confidence 9999988764 448999999999987655544322 3444543210 0000 12333
Q ss_pred HHHhh----cCCccEEEEeCCCCccc--cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEE
Q 014769 173 VEALA----DKNTAAMVIINPGNPCG--NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVIT 246 (419)
Q Consensus 173 l~~~~----~~~~~~v~i~~p~nptG--~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~ 246 (419)
+++.+ ..++.++++++|.|++| ...+.+++++|.++|++||+++|+||+|.++.+.|.. ..+..++...+++
T Consensus 215 ~~~~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~-~~~~~~~~~pdi~- 292 (451)
T 3oks_A 215 AITVIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAM-FACEHEGIDPDLI- 292 (451)
T ss_dssp HHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSS-SGGGGGTCCCSEE-
T ss_pred HHHHHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccc-hhhhhcCCCCCee-
Confidence 33333 33567788888876665 3558888999999999999999999999987665542 2223333322333
Q ss_pred EecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccch-HHHHHHHHHHHHHHH
Q 014769 247 LGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKE-DFFCKLIDTLRESAE 324 (419)
Q Consensus 247 ~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~-~~~~~~~~~~~~~~~ 324 (419)
||||.++. |+|+||+++++ ++++.+.... ..+++.+++++.++.++|+.... +..++..+.....++
T Consensus 293 --t~sK~l~~-G~~iG~v~~~~--------~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~ 361 (451)
T 3oks_A 293 --VTAKGIAG-GLPLSAVTGRA--------EIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKD 361 (451)
T ss_dssp --EECGGGGT-TSSCEEEEEEH--------HHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred --eehhhhhC-CcceEEEEECH--------HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 88999865 99999999875 5666665433 34577889999888888875322 233333333334444
Q ss_pred HHHHHhhcCCCCCCCCCCCceEEEEeecCccc--ccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHH
Q 014769 325 ICYDGVKEIPCISCPNKPEGSMVTMVKLNPWL--LEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSA 400 (419)
Q Consensus 325 ~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~--~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~ 400 (419)
.+.+.+..++.+. . .+..|.++++.+.... .+......++...+ .++||.+.|+..| .+++|+++ ..++++
T Consensus 362 ~L~~~~~~~~~~~-~-~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~~~--~~~iRi~~~~~~t~e~ 436 (451)
T 3oks_A 362 RLGRLQAEDDRIG-D-VRGRGAMIAMELVKAGTTEPDADLTKALCAGA-HAAGVIVLSCGTY--GNVVRFLPPLSIGDDL 436 (451)
T ss_dssp HHHHHHHHCTTEE-E-EEEETTEEEEEEBSTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCTTCCHHH
T ss_pred HHHHHHhhCCCeE-E-EEEeeEEEEEEEecCccCCCCHHHHHHHHHHH-HhCCcEEecCCCC--CCEEEEECCCCCCHHH
Confidence 4444444455443 2 2334667777663200 00001234565555 5679999998654 36899987 458999
Q ss_pred HHHHHHHHHHHHHH
Q 014769 401 LKDGLGRMKAFCQR 414 (419)
Q Consensus 401 l~~~l~~l~~~~~~ 414 (419)
+++++++|++++++
T Consensus 437 i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 437 LNEGLDVLEEVLRG 450 (451)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999998864
No 152
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.97 E-value=2e-29 Score=239.51 Aligned_cols=325 Identities=13% Similarity=0.125 Sum_probs=231.0
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
++|+|+. | .+ ++.+.+++.+.+.... |.+..+..++|+++++++ + .+++++++|+++++..
T Consensus 9 ~~i~~~~--p----~~--~~~~~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~------~--~~~~~~~~~gt~al~~ 69 (393)
T 1mdo_A 9 DFLPFSR--P----AM--GAEELAAVKTVLDSGW---ITTGPKNQELEAAFCRLT------G--NQYAVAVSSATAGMHI 69 (393)
T ss_dssp CCBCSCC--C----CC--CHHHHHHHHHHHHHTC---CSSSHHHHHHHHHHHHHH------C--CSEEEEESCHHHHHHH
T ss_pred cccccCC--C----CC--CHHHHHHHHHHHhcCC---cCCChHHHHHHHHHHHHh------C--CCcEEEecChHHHHHH
Confidence 4678775 3 23 3677888888886542 334568899999999998 2 2489999999999999
Q ss_pred HHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 123 ILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 123 ~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
++.++ .++||+|+++.|+|+++...++..|.+++.+++++ +++.+|++.+++++++++++|+++ ||||...+
T Consensus 70 ~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~g~~~~~v~~~~-~~~~~d~~~l~~~l~~~~~~v~~~---~~~G~~~~--- 142 (393)
T 1mdo_A 70 ALMALGIGEGDEVITPSMTWVSTLNMIVLLGANPVMVDVDR-DTLMVTPEHIEAAITPQTKAIIPV---HYAGAPAD--- 142 (393)
T ss_dssp HHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBCT-TTCCBCHHHHHHHCCTTEEEECCB---CGGGCCCC---
T ss_pred HHHHcCCCCCCEEEeCCCccHhHHHHHHHCCCEEEEEeccC-CcCCCCHHHHHHhcCCCceEEEEe---CCCCCcCC---
Confidence 99999 89999999999999999999999999999998764 346799999999998777777665 48999887
Q ss_pred HHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIID 280 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~ 280 (419)
+++|.++|+++|+++|+|++|+.+ .+.+.. + +. ..+++.|+||..+++|.|+||++++++ ++++
T Consensus 143 ~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~---~~--~d~~~~S~~k~K~l~~~~~g~~~~~~~-------~~~~ 207 (393)
T 1mdo_A 143 LDAIYALGERYGIPVIEDAAHATGTSYKGRH---I---GA--RGTAIFSFHAIKNITCAEGGIVVTDNP-------QFAD 207 (393)
T ss_dssp HHHHHHHHHHHTCCBCEECTTCTTCEETTEE---T---TS--SSEEEEECCTTSSSCSSSCEEEEESCH-------HHHH
T ss_pred HHHHHHHHHHcCCeEEEECccccCCeECCee---c---CC--CCeEEEeCCCCCccccccceEEEeCCH-------HHHH
Confidence 899999999999999999999963 343321 1 11 458889999333455668999998642 4666
Q ss_pred HHHhhhccc-------------------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 281 SIKDCLSIY-------------------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 281 ~l~~~~~~~-------------------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
.++...... ...+.+...++...++ .+++..++.+++++.+.+.|.+++
T Consensus 208 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~-----~~~~~~~~~~~~~~~l~~~L~~~~- 281 (393)
T 1mdo_A 208 KLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQ-----KLDALNARRAAIAAQYHQAMADLP- 281 (393)
T ss_dssp HHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHH-----THHHHHHHHHHHHHHHHHHHHTSS-
T ss_pred HHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 665432211 0123332222222232 245566666778888888998874
Q ss_pred CCCCCCC-----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC--------------CC-------CCe
Q 014769 336 ISCPNKP-----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV--------------GL-------KNW 389 (419)
Q Consensus 336 ~~~~~~p-----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~--------------~~-------~~~ 389 (419)
+.....| .+++++|+.++.... ..+..++...| .++||.+.+|..+ .. ..+
T Consensus 282 ~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~~~l~~~l-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (393)
T 1mdo_A 282 FQPLSLPSWEHIHAWHLFIIRVDEARC--GITRDALMASL-KTKGIGTGLHFRAAHTQKYYRERFPTLTLPDTEWNSERI 358 (393)
T ss_dssp CEECCCCSSCEECCCSCEEEECCHHHH--SSCHHHHHHHH-HHTTBCCBCCCCCGGGSHHHHHHSTTCCCHHHHHHHTTE
T ss_pred cccccCCCCCCCceeEEEEEEeccccc--ccCHHHHHHHH-HhCCCCcccccCccccChhhhccCCccCChhHHHHHhCE
Confidence 5522123 455678888863100 02466777666 5679999987654 11 347
Q ss_pred EEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 390 LRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 390 ~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+|+++. .++++++++++.|+++++.+..
T Consensus 359 lRi~~~~~~t~~~i~~~~~~l~~~~~~~~~ 388 (393)
T 1mdo_A 359 CSLPLFPDMTESDFDRVITALHQIAGQGSH 388 (393)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHC----
T ss_pred EEecCCCCCCHHHHHHHHHHHHHHHhcCCc
Confidence 999996 6899999999999999876644
No 153
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.97 E-value=5.4e-30 Score=246.04 Aligned_cols=335 Identities=14% Similarity=0.119 Sum_probs=220.3
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
+|..++||+.|.+.. .++ .+|.+.+++.+++..... ..|. .....++++.+++++ | .++|++++|+
T Consensus 63 ~G~~ylD~~~g~~~~--~lgh~~p~v~~ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~----g----~~~v~~~~sG 131 (433)
T 1z7d_A 63 NDKRYYDFLSAYSSV--NQGHCHPNILNAMINQAKNLTICSRAFF-SVPLGICERYLTNLL----G----YDKVLMMNTG 131 (433)
T ss_dssp TCCEEEESSHHHHTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-EHHHHHHHHHHHHHH----T----CSEEEEESSH
T ss_pred CCCEEEEcccchhhc--ccCCCCHHHHHHHHHHHHhCCCccCCcC-CHHHHHHHHHHHhhc----C----CCeEEEeCCH
Confidence 467789998875431 244 789999999999876432 1121 122345555665554 2 5799999999
Q ss_pred HHHHHHHHHHhc---------CCC-CeEEeeCCCCCCcHHH-HhhcC------------CEEEEEeccCCCCcccChHHH
Q 014769 117 KQAVEVILSVLA---------RPG-ANVLLPRPGWPYYEGI-AQRKQ------------VEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 117 ~~al~~~~~~l~---------~~g-d~vlv~~p~~~~~~~~-~~~~g------------~~~~~~~~~~~~~~~~~~~~l 173 (419)
++|++.+++.+. .+| |.|++++|+|+++... +...| .++..++. .|++.|
T Consensus 132 seA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 204 (433)
T 1z7d_A 132 AEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSNFGPFAPQFSKVPY-------DDLEAL 204 (433)
T ss_dssp HHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------------CEEEECT-------TCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCccccccCCCCCCCeEEeCC-------CCHHHH
Confidence 999999998864 367 9999999999876432 22223 12233322 278999
Q ss_pred HHhhc-CCccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769 174 EALAD-KNTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (419)
Q Consensus 174 ~~~~~-~~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 250 (419)
+++++ ++++ +++++| +|++|.+ ++.+++++|.++|+++|+++|+||+|.++.+.+... .+..++...+++ |+
T Consensus 205 e~~l~~~~~~-~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~-~~~~~~~~~di~---t~ 279 (433)
T 1z7d_A 205 EEELKDPNVC-AFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL-CVHHYNVKPDVI---LL 279 (433)
T ss_dssp HHHHTSTTEE-EEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EE
T ss_pred HHHhCCCCEE-EEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch-hhHhcCCCCCEE---EE
Confidence 99984 4454 455556 5678975 688899999999999999999999998765555322 122222222233 88
Q ss_pred CCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 251 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
||.++ +| +|+||+++++ ++++.+... ...+++.+++++.++.++|+.... ++..++++++++++.+
T Consensus 280 sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 347 (433)
T 1z7d_A 280 GKALS-GGHYPISAVLAND--------DIMLVIKPGEHGSTYGGNPLAASICVEALNVLIN---EKLCENAEKLGGPFLE 347 (433)
T ss_dssp CGGGG-TTSSCCEEEEECH--------HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred Ccccc-CCCCCeEEEEECH--------HHHhhhccccccccCCCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHH
Confidence 99976 79 9999999865 466555443 233566788888888777765321 2345566667777777
Q ss_pred HhhcC-CCCCCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHH
Q 014769 329 GVKEI-PCISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDG 404 (419)
Q Consensus 329 ~l~~~-~~~~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~ 404 (419)
.|+++ .++..+ ..+..|.++++.++... .+..++...|+ ++||.+.|+. .+++|+++. .++++++++
T Consensus 348 ~L~~l~~~~~~~~~~~~~g~~~~i~~~~~~----~~~~~~~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~ 418 (433)
T 1z7d_A 348 NLKRELKDSKIVRDVRGKGLLCAIEFKNEL----VNVLDICLKLK-ENGLITRDVH----DKTIRLTPPLCITKEQLDEC 418 (433)
T ss_dssp HHHHHHTTCTTEEEEEEETTEEEEEECTTT----CCHHHHHHHHH-HTTEECCEET----TTEEEECCCTTCCHHHHHHH
T ss_pred HHHHHHHhCCCeEEEEeeeeEEEEEEccCh----hHHHHHHHHHH-HCCeEEecCC----CCEEEEECCcCCCHHHHHHH
Confidence 76653 122211 12345677888886421 13567777775 5799998862 579999874 689999999
Q ss_pred HHHHHHHHHHHhcc
Q 014769 405 LGRMKAFCQRHTKK 418 (419)
Q Consensus 405 l~~l~~~~~~~~~~ 418 (419)
+++|++++++...|
T Consensus 419 l~~l~~~l~~~~~~ 432 (433)
T 1z7d_A 419 TEIIVKTVKFFDER 432 (433)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999887655
No 154
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.97 E-value=8.9e-30 Score=243.73 Aligned_cols=322 Identities=13% Similarity=0.080 Sum_probs=227.0
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCC-----CCC--CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFN-----CYA--TNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~-----~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
++++.|+.+.+. +.++.+.+++.+.+...... .|. ......++++.+++++ +.++++|++|+
T Consensus 27 ~~~~yld~~~~~-----~~~~~v~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~------g~~~~~v~~~~ 95 (416)
T 1qz9_A 27 EGVIYLDGNSLG-----ARPVAALARAQAVIAEEWGNGLIRSWNSAGWRDLSERLGNRLATLI------GARDGEVVVTD 95 (416)
T ss_dssp TTCEECCTTTSC-----CCBTTHHHHHHHHHHTCCCCCGGGHHHHTSGGGHHHHHHHHHHTTT------TCCTTSEEECS
T ss_pred CCeEeecCCCcC-----CCcHHHHHHHHHHHHHHHhccCccccchhhHHHHHHHHHHHHHHHc------CCCcccEEEeC
Confidence 457788777542 45678889998888653111 111 0133456777777765 45678999999
Q ss_pred cHHHHHHHHHHHhc------CCCCeEEee-CCCCCCcHHH----Hhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCc
Q 014769 115 GCKQAVEVILSVLA------RPGANVLLP-RPGWPYYEGI----AQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNT 181 (419)
Q Consensus 115 g~~~al~~~~~~l~------~~gd~vlv~-~p~~~~~~~~----~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 181 (419)
|+++++..++.++. ++||+|++. .++|+.+... .... |.+++.+++ ++++++++++++
T Consensus 96 g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~~---------~~~l~~~i~~~~ 166 (416)
T 1qz9_A 96 TTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLRLVDS---------PEELPQAIDQDT 166 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEEEESS---------GGGHHHHCSTTE
T ss_pred ChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEEEeCc---------HHHHHHHhCCCc
Confidence 99999998888876 889875555 5567654332 2223 888887764 678888888888
Q ss_pred cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769 182 AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF 261 (419)
Q Consensus 182 ~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 261 (419)
++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.. .....+..++ ..+++.|+||.+ .+|.++
T Consensus 167 ~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~a~~~g----~~~~~~~~~~---~d~~~~s~~K~l-~~g~~~ 235 (416)
T 1qz9_A 167 AVVMLTHVNYKTGYMHD---MQALTALSHECGALAIWDLAHSAG----AVPVDLHQAG---ADYAIGCTYKYL-NGGPGS 235 (416)
T ss_dssp EEEEEESBCTTTCBBCC---HHHHHHHHHHHTCEEEEECTTTTT----TSCCCHHHHT---CSEEEECSSSTT-CCCTTC
T ss_pred eEEEEeccccCcccccC---HHHHHHHHHHcCCEEEEEcccccc----CcCCChhhcC---CCEEEecCcccC-CCCCCC
Confidence 99999999999999999 899999999999999999999842 1111222222 237888999984 567777
Q ss_pred -EEEEeeCCCCccchhhHHHHHHhh------------------------hccccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 262 -GWLVTNDPNGIFQKSGIIDSIKDC------------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 262 -G~~~~~~~~~~~~~~~~~~~l~~~------------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
|+++++++ +++.++.. ....++++...+.++.++++....+++++..
T Consensus 236 ~g~l~~~~~--------~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 307 (416)
T 1qz9_A 236 QAFVWVSPQ--------LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMASLR 307 (416)
T ss_dssp CCEEEECTT--------TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHHHH
T ss_pred eEEEEECHH--------HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHHHH
Confidence 99998753 22222211 0112356666777766677653334577888
Q ss_pred HHHHHHHHHHHHHhhcC-C--CCCCCCCCC----ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCe
Q 014769 317 DTLRESAEICYDGVKEI-P--CISCPNKPE----GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNW 389 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~-~--~~~~~~~p~----~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~ 389 (419)
++++++++.+.+.|+++ | ++.++ .|. .+.++|+.++ +..++...| .++||.+... ..++
T Consensus 308 ~~~~~~~~~l~~~L~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~--------~~~~l~~~l-~~~gi~~~~~----~~~~ 373 (416)
T 1qz9_A 308 RKSLALTDLFIELVEQRCAAHELTLV-TPREHAKRGSHVSFEHP--------EGYAVIQAL-IDRGVIGDYR----EPRI 373 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSCCEEC-SCSSGGGBCSEEEEECT--------THHHHHHHH-HTTTEECEEE----TTTE
T ss_pred HHHHHHHHHHHHHHHhhccCCCeEEe-CCCCHHHcCCEEEEecC--------CHHHHHHHH-HhCCcEeccC----CCCe
Confidence 89999999999999874 6 77633 442 3557888875 356677666 5679987532 3679
Q ss_pred EEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769 390 LRIAFC---AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 390 ~Ris~~---~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+|++++ .+++++++++++|++++++..
T Consensus 374 lRis~~~~~~t~~~i~~~~~~l~~~~~~~~ 403 (416)
T 1qz9_A 374 MRFGFTPLYTTFTEVWDAVQILGEILDRKT 403 (416)
T ss_dssp EEEECCTTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeCcccCCCHHHHHHHHHHHHHHHhccc
Confidence 999996 489999999999999987653
No 155
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.97 E-value=8.9e-30 Score=247.49 Aligned_cols=346 Identities=11% Similarity=0.040 Sum_probs=239.9
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHHHHHHHHhhCCCCCCC--CcEEEc
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRAIADYLSRDLPYKLSA--DDVYVT 113 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--~~i~~t 113 (419)
.+.|+|..+.+ ++++.+.+++.+.+.+....+ |+...+..++++.+.+++.+.+|...+. .+|+++
T Consensus 44 ~~~i~L~a~e~------~~~~~V~eA~~~~l~~~~~~g~p~~~~y~~~~~~~~le~~~~~~~a~~~g~~~~~~~~~V~~~ 117 (483)
T 1rv3_A 44 RVGLELIASEN------FASRAVLEALGSCLNNKYSLGYPGQRYYGGTEHIDELETLCQKRALQAYGLDPQCWGVNVQPY 117 (483)
T ss_dssp HSSEECCTTCC------CCCHHHHHHHTSGGGTCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHTTCCTTTEEEECCCS
T ss_pred hcCeEEEcCCC------CCCHHHHHHHHHHHhccCcccCCCccccCcchhHHHHHHHHHHHHHHHhCCCcccCceEEEEC
Confidence 46799977642 467899999988876532112 3333345678888888888877755322 348888
Q ss_pred ccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH--------HHhhcC--CEEEEEeccCCCCcccChHHHHHhhc-CCcc
Q 014769 114 LGCKQAVEVILSVLARPGANVLLPRPGWPYYEG--------IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALAD-KNTA 182 (419)
Q Consensus 114 ~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~--------~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~ 182 (419)
+|+ +++..++.++++|||+|++++|+|.++.. .+...| ...+.+++++ .++.+|+++|+++++ ++++
T Consensus 118 sGs-~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~~~~~~-~~~~iD~d~le~~i~~~~tk 195 (483)
T 1rv3_A 118 SGS-PANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMAYKVNP-DTGYIDYDRLEENARLFHPK 195 (483)
T ss_dssp SHH-HHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCS
T ss_pred CcH-HHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEECcccc-CCCcCCHHHHHHHHhhcCCc
Confidence 888 88888899999999999999999887643 223334 4445554443 357899999999998 6889
Q ss_pred EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEEEEecCCCcCCCCCcee
Q 014769 183 AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRF 261 (419)
Q Consensus 183 ~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~ 261 (419)
+|++ +++||+ .+.+ +++|.++|+++|+++|+|++|.. +.+.+....++. . ..+++.|+||++ .|+|.
T Consensus 196 lIi~-~~sn~~-~~~d---l~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~--~---~div~~s~~K~l--~Gprg 263 (483)
T 1rv3_A 196 LIIA-GTSCYS-RNLD---YGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE--H---CHVVTTTTHKTL--RGCRA 263 (483)
T ss_dssp EEEE-CCSSCC-SCCC---HHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG--T---CSEEEEESSGGG--CCCSC
T ss_pred EEEE-eCCcCC-CcCC---HHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC--C---CcEEEecCcccC--CCCCc
Confidence 9888 999988 8888 89999999999999999999874 333332222221 1 237889999984 68889
Q ss_pred EEEEeeCCCCccchh-------hHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc
Q 014769 262 GWLVTNDPNGIFQKS-------GIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 262 G~~~~~~~~~~~~~~-------~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
||++++++....... ++.+.+.... ...++++.....++..++......++++..+++.++++.+.+.|.+
T Consensus 264 G~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~~~~~~~~~~~~~l~~~L~~ 343 (483)
T 1rv3_A 264 GMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFKEYQRQVVANCRALSAALVE 343 (483)
T ss_dssp EEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHh
Confidence 999998631100000 1333343321 1234555555566666666543456788899999999999999998
Q ss_pred CCCCCCCCCCC-ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCCCCC-CCCeEEEEee--cC----HHH
Q 014769 333 IPCISCPNKPE-GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGIYVG-LKNWLRIAFC--AE----PSA 400 (419)
Q Consensus 333 ~~~~~~~~~p~-~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~~~-~~~~~Ris~~--~~----~~~ 400 (419)
+ |+.++ .+. +.+++|+.+.... .+..++. ++|.+.||.+. ||..+. ..+++||+++ ++ +++
T Consensus 344 ~-g~~~~-~~~~~~~~~~v~~~~~g----~~~~~~~-~~L~~~gI~v~~~~~pg~~~~~~~~~iRis~~~~~t~g~~~ed 416 (483)
T 1rv3_A 344 L-GYKIV-TGGSDNHLILVDLRSKG----TDGGRAE-KVLEACSIACNKNTCPGDKSALRPSGLRLGTPALTSRGLLEKD 416 (483)
T ss_dssp T-TCEEG-GGSCSSSEEEEEGGGGT----CCHHHHH-HHHHHTTEECEEECCSSCSCTTSCCEEEEECHHHHHTTCCHHH
T ss_pred c-CCEec-cCCCCCceEEEeccCCC----CCHHHHH-HHHHhCCcEEecCCCCCCCcCCCCceEEeecCCcccCCCCHHH
Confidence 8 87744 442 3467788875321 1455554 55578999999 887322 2579999995 35 899
Q ss_pred HHHHHHHHHHHHHH
Q 014769 401 LKDGLGRMKAFCQR 414 (419)
Q Consensus 401 l~~~l~~l~~~~~~ 414 (419)
++++++.|.++++.
T Consensus 417 i~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 417 FQKVAHFIHRGIEL 430 (483)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999876
No 156
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.97 E-value=6.2e-30 Score=247.20 Aligned_cols=346 Identities=14% Similarity=0.087 Sum_probs=233.8
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC-CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN-SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~-~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.|..++||+.|.+.....+. +|.+.+++.+++.... +... .+..++++.+++.+.+..+ .++++|++|+|+++
T Consensus 48 ~g~~~lD~~~~~~~~~lG~~-~~~v~~a~~~~~~~~~---~~~~~~~~~~~~~~l~~~la~~~~--~~~~~v~~~~ggse 121 (449)
T 3a8u_X 48 KGRKVYDSLSGLWTCGAGHT-RKEIQEAVAKQLSTLD---YSPGFQYGHPLSFQLAEKITDLTP--GNLNHVFFTDSGSE 121 (449)
T ss_dssp TCCEEEETTHHHHTCTTCBS-CHHHHHHHHHHTTTCS---CCCSSSCCCHHHHHHHHHHHTTSS--TTEEEEEEESSHHH
T ss_pred CCCEEEECCccHhhccCCCC-CHHHHHHHHHHHHhCC---CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEcCcHHH
Confidence 46778999877643322223 7999999999986532 2211 2334566666666665443 46789999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEeeCCCCCCcHH-HHhhcCC------------EEEEEeccCC--CC-cccC-----
Q 014769 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEG-IAQRKQV------------EVRHFDLLPE--RN-WEVD----- 169 (419)
Q Consensus 119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~-~~~~~g~------------~~~~~~~~~~--~~-~~~~----- 169 (419)
+++.+++++.. ++|+|++.+|+|+++.. .+...|. .+..++.+.. .+ .++|
T Consensus 122 a~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~ 201 (449)
T 3a8u_X 122 CALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKLFGQPMQDVDHLPHTLLASNAYSRGMPKEGG 201 (449)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTTTCCCSCSEEEECCCCCGGGTTCSSSCSSSH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccccCCCCCCCeEecCCccccCccccCChHHHH
Confidence 99999998764 67999999999997643 3333331 2344443211 11 1245
Q ss_pred ---hHHHHHhhcC---CccEEEEeCCC-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 170 ---LDAVEALADK---NTAAMVIINPG-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 170 ---~~~l~~~~~~---~~~~v~i~~p~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
++.|+++++. ....+++++|+ |+||. +.+.+++++|.++|+++|+++|+||+|.++.+.+.. ..+..++..
T Consensus 202 ~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~-~~~~~~~~~ 280 (449)
T 3a8u_X 202 IALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQHNILLVFDEVITGFGRTGSM-FGADSFGVT 280 (449)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSS-SHHHHHTCC
T ss_pred HHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHHhCCEEEEeccccCccccCcc-hhhhhcCCC
Confidence 8889888863 23356667774 67997 567999999999999999999999999876554432 122222222
Q ss_pred CcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh----------hccccCCchHHHHHHHHHHcccchH
Q 014769 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC----------LSIYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.+++ |+||.++ +| +|+||+++++ ++++.+... ...+++.+++++.++.++++....
T Consensus 281 ~di~---s~sK~l~-~G~~~~G~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~- 347 (449)
T 3a8u_X 281 PDLM---CIAKQVT-NGAIPMGAVIAST--------EIYQTFMNQPTPEYAVEFPHGYTYSAHPVACAAGLAALCLLQK- 347 (449)
T ss_dssp CSEE---EECGGGG-TTSSCCEEEEEEH--------HHHHHHHTCSSCTTSCSSCCCCTTTTCHHHHHHHHHHHHHHHH-
T ss_pred CCEE---EEccccc-CCCCceEEEEECH--------HHHHHhhccCcccccccccccCCCcccHHHHHHHHHHHHHHHh-
Confidence 2333 8899976 47 9999999875 577777653 123456788888888877764221
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCC-CCCCceEEEEeecCcccccCCC--CHHHHHHHHHHhcCeEeecCCCCCCC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCP-NKPEGSMVTMVKLNPWLLEDIN--DDIEFALKLAKEESVIVTPGIYVGLK 387 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~~~~~--~~~~~~~~ll~~~gv~v~~g~~~~~~ 387 (419)
++..++++++.+.+.+.|++++.+..+ ..+..|+++|+.++.... .. +..++...|+ ++||.+.|+.
T Consensus 348 --~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~~~~g~~~~i~~~~~~~--~~~~~~~~~~~~l~-~~Gv~v~~~g----- 417 (449)
T 3a8u_X 348 --ENLVQSVAEVAPHFEKALHGIKGAKNVIDIRNFGLAGAIQIAPRDG--DAIVRPFEAGMALW-KAGFYVRFGG----- 417 (449)
T ss_dssp --TTHHHHHHHHHHHHHHHHHTTTTSTTEEEEEEETTEEEEEECCBTT--BSSHHHHHHHHHHH-HHTEECEEET-----
T ss_pred --cCHHHHHHHHHHHHHHHHHHHhcCCCeEEEeeeEEEEEEEEecCcc--cccccHHHHHHHHH-HCCcEEecCC-----
Confidence 245667777888888888775333311 123456788988864210 00 1235777775 5699999972
Q ss_pred CeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 388 NWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 388 ~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+++||++ ..+++++++++++|++++++.
T Consensus 418 ~~iRis~~~~~t~~~i~~~l~~l~~~l~~~ 447 (449)
T 3a8u_X 418 DTLQFGPTFNSKPQDLDRLFDAVGEVLNKL 447 (449)
T ss_dssp TEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCcCCHHHHHHHHHHHHHHHHHH
Confidence 7899996 578999999999999998764
No 157
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.97 E-value=3.2e-29 Score=241.03 Aligned_cols=331 Identities=13% Similarity=0.095 Sum_probs=232.2
Q ss_pred CCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCC--CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKF--NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~--~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
+|+.+|||..|.+.. .++ .+|.+.+++.+++..... ..|. .....++++.+++++ +.++|++++|+
T Consensus 74 ~g~~ylD~~sg~~~~--~lgh~~p~v~~Ai~~~~~~~~~~~~~~~-~~~~~~l~~~la~~~--------g~~~v~~~~sG 142 (439)
T 2oat_A 74 EGRKYFDFLSSYSAV--NQGHCHPKIVNALKSQVDKLTLTSRAFY-NNVLGEYEEYITKLF--------NYHKVLPMNTG 142 (439)
T ss_dssp TCCEEEESSGGGGTT--TTCBTCHHHHHHHHHHHTTCSCCCTTSE-ESSHHHHHHHHHHHH--------TCSEEEEESSH
T ss_pred CCCEEEEccCCcccc--cCCCCCHHHHHHHHHHHHhcCcccCccC-CHHHHHHHHHHHHhc--------CCCEEEEeCCH
Confidence 367789999885432 244 789999999999876422 1232 234567777777776 25799999999
Q ss_pred HHHHHHHHHHhc---------CCC-CeEEeeCCCCCCcHH-HHhhcC------------CEEEEEeccCCCCcccChHHH
Q 014769 117 KQAVEVILSVLA---------RPG-ANVLLPRPGWPYYEG-IAQRKQ------------VEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 117 ~~al~~~~~~l~---------~~g-d~vlv~~p~~~~~~~-~~~~~g------------~~~~~~~~~~~~~~~~~~~~l 173 (419)
++|++.+++.+. .+| |.|++.+|+|++... .+...| .++..++. .|++.|
T Consensus 143 seA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~p~~~~v~~~~~-------~d~~~l 215 (439)
T 2oat_A 143 VEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDGFGPFMPGFDIIPY-------NDLPAL 215 (439)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTTSCSCCTTEEEECS-------SCHHHH
T ss_pred HHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccCCCCCCCCeEEeCC-------CCHHHH
Confidence 999999999875 357 899999999987643 333333 23444442 278999
Q ss_pred HHhhc-CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecC
Q 014769 174 EALAD-KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSI 250 (419)
Q Consensus 174 ~~~~~-~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 250 (419)
+++++ +++ .+++++| +|++|. .++.+++++|.++|+++|+++|+||+|.++.+.|... .+..++...+++ |+
T Consensus 216 e~~l~~~~~-~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~-~~~~~~~~~Di~---t~ 290 (439)
T 2oat_A 216 ERALQDPNV-AAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL-AVDYENVRPDIV---LL 290 (439)
T ss_dssp HHHTTSTTE-EEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCCCSEE---EE
T ss_pred HHHhCCCCE-EEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch-hHHHhCCCCcEE---Ee
Confidence 99985 444 4555666 567896 5689999999999999999999999998766555322 122222222233 89
Q ss_pred CCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 251 SKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 251 sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
||.++ +| +|+||+++++ ++++.+... ...+++.+++++.++.++++.... ++..++++++++++.+
T Consensus 291 sK~l~-~G~~~~G~v~~~~--------~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~---~~~~~~~~~~~~~l~~ 358 (439)
T 2oat_A 291 GKALS-GGLYPVSAVLCDD--------DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEE---ENLAENADKLGIILRN 358 (439)
T ss_dssp CGGGG-TTSSCCEEEEECH--------HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHH---TTHHHHHHHHHHHHHH
T ss_pred ccccc-CCCCCeEEEEECH--------HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHHHH
Confidence 99976 58 9999999975 466555443 233566788888888777765321 2456778888899999
Q ss_pred HhhcCCCCCCC-CCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHH
Q 014769 329 GVKEIPCISCP-NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGL 405 (419)
Q Consensus 329 ~l~~~~~~~~~-~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l 405 (419)
.|+++ ++..+ ..+..|.++++.++... + .+..++...++ ++||.+.|+. .+++|+++ ..+++++++++
T Consensus 359 ~L~~l-~~~~~~~~~~~g~~~~v~l~~~~--~-~~~~~l~~~l~-~~Gv~v~~~~----~~~iRi~~~~~~t~e~i~~~l 429 (439)
T 2oat_A 359 ELMKL-PSDVVTAVRGKGLLNAIVIKETK--D-WDAWKVCLRLR-DNGLLAKPTH----GDIIRFAPPLVIKEDELRESI 429 (439)
T ss_dssp HHTTS-CTTTEEEEEEETTEEEEEECCCS--S-CCHHHHHHHHH-HTTEECCBSS----SSEEEECCCTTCCHHHHHHHH
T ss_pred HHHHh-cCCCcEEEEeeeeEEEEEEecCc--c-HHHHHHHHHHH-HCCeEEecCC----CCEEEEECccCCCHHHHHHHH
Confidence 99886 44321 12345677888886421 0 13567777775 5799998852 57999987 46899999999
Q ss_pred HHHHHHHHH
Q 014769 406 GRMKAFCQR 414 (419)
Q Consensus 406 ~~l~~~~~~ 414 (419)
++|++++++
T Consensus 430 ~~l~~~l~~ 438 (439)
T 2oat_A 430 EIINKTILS 438 (439)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHh
Confidence 999998864
No 158
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=99.97 E-value=5e-30 Score=247.02 Aligned_cols=327 Identities=17% Similarity=0.121 Sum_probs=222.6
Q ss_pred CCeeeccCC-CCCCCCCCCChHHHHHHHHHH---HhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 42 RPVVPLGYG-DPTAFPCFRTAVEAEDAIVDA---VRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 42 ~~~i~l~~g-~~~~~~~~~~~~~v~~a~~~~---~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.++|+|+.| +| .++.++.+.++.... ........|+ ..|.+ +++++++++.+.+|. +++++++|++
T Consensus 89 ~~~i~l~~g~~~----~~~~~~~i~~a~~~~~~~~~~~~~~~Y~-~~g~~-~~~~l~~~la~~~g~----~~~i~~~sGt 158 (464)
T 1ibj_A 89 TLLVNLDNKFDP----FDAMSTPLYQTATFKQPSAIENGPYDYT-RSGNP-TRDALESLLAKLDKA----DRAFCFTSGM 158 (464)
T ss_dssp HHHTCCCCSSCT----TCCSSCCCCCCSBCCCSSSSCCCSCSBT-TTCCH-HHHHHHHHHHHHHTC----SEEEEESSHH
T ss_pred CeEEECCCCCCC----CCCCCccHHhhhhhhhhcccccCCcccc-CCCCH-HHHHHHHHHHHHhCC----CeEEEECCHH
Confidence 457888887 53 355566666655432 1112234676 35665 777888887776552 4778888889
Q ss_pred HHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 118 QAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 118 ~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
+++..++. ++++||+|+++.|+|.++... ++..|.+++.++++ |++++++++++++++|++++|+|||
T Consensus 159 ~al~~~l~-~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~-------d~~~l~~~i~~~tk~v~l~~p~Npt 230 (464)
T 1ibj_A 159 AALSAVTH-LIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTT-------KLDEVAAAIGPQTKLVWLESPTNPR 230 (464)
T ss_dssp HHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTT-------SHHHHHHHCCSSEEEEEECSSCTTT
T ss_pred HHHHHHHH-HhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCC-------CHHHHHHHhccCceEEEEeCCCCCC
Confidence 99998886 778999999999999987643 56679998888752 7899999998889999999999999
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC-CceeEEEEeeCCCCc
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-GWRFGWLVTNDPNGI 272 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G~r~G~~~~~~~~~~ 272 (419)
|.+++ +++|.++|+++|+++|+|++|.... ...++. + +.++++.|+||.++.+ |+|+||++++++
T Consensus 231 G~v~~---l~~i~~la~~~gi~livDea~~~g~----~~~~~~-~---~~div~~S~sK~~~g~~Gl~~G~l~~~~~--- 296 (464)
T 1ibj_A 231 QQISD---IRKISEMAHAQGALVLVDNSIMSPV----LSRPLE-L---GADIVMHSATKFIAGHSDVMAGVLAVKGE--- 296 (464)
T ss_dssp CCCCC---HHHHHHHHHTTTCEEEEECTTTCTT----TCCGGG-T---TCSEEEEETTTTTTCSSCCCCEEEEECSH---
T ss_pred CEeec---HHHHHHHHHHcCCEEEEECCCcccc----cCChhh-c---CCEEEEECCcccccCCCCCcEEEEEEChH---
Confidence 99998 8999999999999999999997522 111221 2 3568999999987654 899999999742
Q ss_pred cchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH----------HHhhcCCCCCCCCC
Q 014769 273 FQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY----------DGVKEIPCISCPNK 341 (419)
Q Consensus 273 ~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~----------~~l~~~~~~~~~~~ 341 (419)
++++.++.... ..++.++..+.++...++.. ...+++.........+.+. +.|+++|++.++ .
T Consensus 297 ----~l~~~l~~~~~~~g~~~~~~~~~a~~~al~~~-~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~ 370 (464)
T 1ibj_A 297 ----KLAKEVYFLQNSEGSGLAPFDCWLCLRGIKTM-ALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLH-F 370 (464)
T ss_dssp ----HHHHHHHHHHHHTTCBCCHHHHHHHHHHHTTH-HHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHH-T
T ss_pred ----HHHHHHHHHHHhcCCCCCHHHHHHHHhchhhH-HHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHH-h
Confidence 46676765543 34556777888877777642 1222222222222223332 223334444422 3
Q ss_pred CC---ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC------------CC----------CC-CCeEEEEee
Q 014769 342 PE---GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI------------YV----------GL-KNWLRIAFC 395 (419)
Q Consensus 342 p~---~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~------------~~----------~~-~~~~Ris~~ 395 (419)
+. .|.++++.++.. .....+++.| +..||.+.+|. .+ +. ++++|++++
T Consensus 371 ~~~~g~g~~~~~~l~~~-----~~~~~~~~~L-~~~gi~v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg 444 (464)
T 1ibj_A 371 SQAKGAGSVFSFITGSV-----ALSKHLVETT-KYFSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAG 444 (464)
T ss_dssp TTCSCCCSEEEEECSCH-----HHHHHHHHHC-SSSEECSCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECC
T ss_pred ccCCCCceEEEEEECCH-----HHHHHHHHhc-CcceEeecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeC
Confidence 32 245677777420 0123455554 55789888885 11 22 578999998
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~ 414 (419)
. |++++++++|++++++
T Consensus 445 ~--edi~~li~~L~~al~~ 461 (464)
T 1ibj_A 445 I--EDVDDLISDLDIAFKT 461 (464)
T ss_dssp S--SCHHHHHHHHHHHHHS
T ss_pred C--CCHHHHHHHHHHHHhh
Confidence 8 8999999999999865
No 159
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.97 E-value=8.3e-30 Score=246.08 Aligned_cols=350 Identities=12% Similarity=0.043 Sum_probs=223.1
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||..|.+..... ..+|.+.+++.+++.... .|....+..+.+.++++++.+..+ .+.++|++|+|+++
T Consensus 41 ~~g~~ylD~~~~~~~~~lG-~~~p~v~~A~~~~~~~~~--~~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse 115 (448)
T 3dod_A 41 INGKEYYDGFSSVWLNVHG-HRKKELDDAIKKQLGKIA--HSTLLGMTNVPATQLAETLIDISP--KKLTRVFYSDSGAE 115 (448)
T ss_dssp TTSCEEEETTHHHHTCSSC-BSCHHHHHHHHHHHTTCS--CCCCSSSEEHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCcchhhccCC-CCCHHHHHHHHHHHHhcc--CccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCchHH
Confidence 3588899999885432222 247999999999987642 233334555777788888777654 34579999999999
Q ss_pred HHHHHHHHhcC----CC----CeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCCccc---------
Q 014769 119 AVEVILSVLAR----PG----ANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERNWEV--------- 168 (419)
Q Consensus 119 al~~~~~~l~~----~g----d~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~~~~--------- 168 (419)
|++.+++.+.. +| |+|++++|+|+++.......+.. +..++. ...+..
T Consensus 116 A~~~al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 193 (448)
T 3dod_A 116 AMEIALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPI--PYVYRSESGDPDECR 193 (448)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECC--CCCTTSSSCCHHHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCC--CccccCCccchhhhh
Confidence 99999999865 44 99999999998765444333221 122222 122221
Q ss_pred --ChHHHHHhhc--CCccEEEEeCC-C-Ccccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCC
Q 014769 169 --DLDAVEALAD--KNTAAMVIINP-G-NPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSI 241 (419)
Q Consensus 169 --~~~~l~~~~~--~~~~~v~i~~p-~-nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~ 241 (419)
|++.|+++++ .+..++++++| + |++|. +.+.+++++|.++|++||+++|+||+|.++.+.|..+ ....++..
T Consensus 194 ~~d~~~le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~-a~~~~~~~ 272 (448)
T 3dod_A 194 DQCLRELAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMF-ACEHENVQ 272 (448)
T ss_dssp HHHHHHHHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-GGGGGTCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchh-hhhhcCCC
Confidence 3788888876 23344455555 5 77774 5688889999999999999999999999876655432 22223322
Q ss_pred CcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHh-------hh-ccccCCchHHHHHHHHHHcccc-hHH
Q 014769 242 VPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKD-------CL-SIYSDIPTFIQGAIPQILEKTK-EDF 311 (419)
Q Consensus 242 ~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~-------~~-~~~~~~~~~~~~a~~~~l~~~~-~~~ 311 (419)
..+ .+|||.++ +| +|+||+++++ ++++.+.. .. ..+++.+++++.++.++|+... .+.
T Consensus 273 ~di---~t~sK~l~-~G~~~ig~v~~~~--------~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~ 340 (448)
T 3dod_A 273 PDL---MAAGKGIT-GGYLPIAVTFATE--------DIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENI 340 (448)
T ss_dssp CSE---EEECGGGG-TTSSCCEEEEEEH--------HHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTH
T ss_pred CCE---EEeccccc-CCcCceEEEEECH--------HHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccH
Confidence 223 36899975 48 5999999976 67777765 22 3456778888988888887532 223
Q ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccC--CC----CHHHHHHHHHHhcCeEeecCCCCC
Q 014769 312 FCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLED--IN----DDIEFALKLAKEESVIVTPGIYVG 385 (419)
Q Consensus 312 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~--~~----~~~~~~~~ll~~~gv~v~~g~~~~ 385 (419)
+++.++..+..++.+.+ +..++.+. . .+..|.++|+.++...... .. ...++...++ ++||.+.|+
T Consensus 341 ~~~~~~~~~~~~~~l~~-l~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~~~~~---- 412 (448)
T 3dod_A 341 VEQVAEKSKKLHFLLQD-LHALPHVG-D-IRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMR-ELGMLTRPL---- 412 (448)
T ss_dssp HHHHHHHHHHHHHHHHH-HTTSTTEE-E-EEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHH-HTTEECCEE----
T ss_pred HHHHHHHHHHHHHHHHH-HhcCCCeE-E-EEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHH-HCCcEEecc----
Confidence 34444444444445544 44454332 1 2334667788776421000 00 0256666665 569999987
Q ss_pred CCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 386 LKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 386 ~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+++|+++ ..+++++++++++|++++++..+
T Consensus 413 -~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~~~ 445 (448)
T 3dod_A 413 -GDVIAFLPPLASTAEELSEMVAIMKQAIHEVTS 445 (448)
T ss_dssp -TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred -CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 27899976 57899999999999999987653
No 160
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.97 E-value=4.1e-30 Score=241.02 Aligned_cols=299 Identities=13% Similarity=0.058 Sum_probs=204.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCC--eEEeeCCCCCCcH---HHHhhcC
Q 014769 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGA--NVLLPRPGWPYYE---GIAQRKQ 152 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd--~vlv~~p~~~~~~---~~~~~~g 152 (419)
..|++..+..+|++++++++ +. +..++++|+++++..++++++.+|| .|+++.+.|.... ......|
T Consensus 41 ~~y~~~~~~~~l~~~la~~~------~~--~~~i~~~~G~~a~~~al~~~~~~gd~~~vi~~~~~~~~~~~~~~~~~~~g 112 (357)
T 3lws_A 41 DQYGTGAIIEPFEQKFADVL------GM--DDAVFFPSGTMAQQVALRIWSDETDNRTVAYHPLCHLEIHEQDGLKELHP 112 (357)
T ss_dssp EETTEETTHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHSS
T ss_pred ccccCChHHHHHHHHHHHHh------CC--CcEEEecCcHHHHHHHHHHHhhcCCCcEEEecccceeeeeccchhhhccC
Confidence 46877678899999999998 32 3345557778899999999988888 5666666544322 2345568
Q ss_pred CEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEccccccc--ccCC
Q 014769 153 VEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGHL--TFGS 229 (419)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~--~~~~ 229 (419)
..++.++. .++.+|+++++++. +++++++++|+||| |.+++.+++++|+++|+++|+++|+|++|... .+.+
T Consensus 113 ~~~~~v~~---~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~ 187 (357)
T 3lws_A 113 IETILVGA---ADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYCRERGIRLHLDGARLFEMLPYYE 187 (357)
T ss_dssp CEEEECSC---TTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHT
T ss_pred cEEEEecC---CCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHHHHcCCEEEEECchhhhhhhhcC
Confidence 87777653 34579999999873 38899999999998 99999999999999999999999999998721 1112
Q ss_pred CCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc-c--cCCchHHHHHHHHHHcc
Q 014769 230 IPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-Y--SDIPTFIQGAIPQILEK 306 (419)
Q Consensus 230 ~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~--~~~~~~~~~a~~~~l~~ 306 (419)
.....+. ... . +++.|+||.++.++ .||+++++ ++++.++..... . .......+.++...++.
T Consensus 188 ~~~~~~~--~~~-d-~~~~s~sK~~~~~~--gg~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 253 (357)
T 3lws_A 188 KTAAEIA--GLF-D-SIYISFYKGLGGIA--GAILAGPA--------AFCQTARIWKRRYGGDLISLYPYIVSADYYYEL 253 (357)
T ss_dssp CCHHHHH--TTS-S-EEEEESSSTTCCSS--CEEEEECH--------HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH
T ss_pred CChHHHH--hcC-C-EEEEeccccCCCCc--eEEEEcCH--------HHHHHHHHHHHHhcCCcccchHHHHHHHHHHHH
Confidence 2211111 111 1 44789999974443 29988754 577777654321 1 11122233333344432
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC
Q 014769 307 TKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL 386 (419)
Q Consensus 307 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~ 386 (419)
+.++ ..++.++++.+.+.|+++|++.+...|.+++|+|++++.... .+..++. +.+.++||.+.||..|..
T Consensus 254 ----~~~~-~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~l~~~Gi~v~~g~~~~~ 324 (357)
T 3lws_A 254 ----RKDR-MGQYYEQAKQLAEQFNALPGVHTTPEVPVSNMFHLHFDGQAA---DISPKLE-QVQEETGLGFVGYLVDKD 324 (357)
T ss_dssp ----HTTC-HHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEEEEESCHH---HHHHHHH-HHHHHHCEESCSCCEECS
T ss_pred ----HHHH-HHHHHHHHHHHHHHHHhCCCCeeccCCCcceEEEEEecCChH---HHHHHHH-HHHHhcCeEEecccccCC
Confidence 2222 334577788899999998888742357778899998864210 0134454 445778999999976652
Q ss_pred -CCeEEEEee-----cCHHHHHHHHHHHHHHH
Q 014769 387 -KNWLRIAFC-----AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 387 -~~~~Ris~~-----~~~~~l~~~l~~l~~~~ 412 (419)
..++|++++ .+++++++++++|.+++
T Consensus 325 ~~~~~r~~i~~~~~~~~~~~l~~al~~l~~al 356 (357)
T 3lws_A 325 GYCSTEISVGDAYGELDQQTRDAGFARLRQAF 356 (357)
T ss_dssp SEEEEEEEBCTTGGGSCHHHHHHHHHHHHHHC
T ss_pred CceEEEEEecchhhhcCHHHHHHHHHHHHHhc
Confidence 238999985 47799999999998764
No 161
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.97 E-value=3.1e-30 Score=248.95 Aligned_cols=341 Identities=13% Similarity=0.063 Sum_probs=229.7
Q ss_pred CCC--CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCC---CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 40 DPR--PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKF---NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 40 ~~~--~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~---~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+|+ .+|||..|...... -..+|.+.+++.+++..... ..|. .....+|++.+++++ +.+.++|++++
T Consensus 71 dG~~~~ylD~~s~~~~~~l-Gh~~p~v~~A~~~~~~~~~~~~~~~~~-~~~~~~L~e~la~~~------~~~~~~v~~~~ 142 (457)
T 3tfu_A 71 DGQPIEVLDAMSSWWTAIH-GHGHPALDQALTTQLRVMNHVMFGGLT-HEPAARLAKLLVDIT------PAGLDTVFFSD 142 (457)
T ss_dssp TTEEEEEEETTHHHHTCTT-CBTCHHHHHHHHHHHHHCSCCCSSSEE-CHHHHHHHHHHHHHS------STTEEEEEEES
T ss_pred CCCeeEEEECCCcHhhhcc-CCCCHHHHHHHHHHHHhccCccccccC-CHHHHHHHHHHHHhC------CCCcCEEEEeC
Confidence 577 89999988432211 12589999999998875322 1222 223345555555554 34567999999
Q ss_pred cHHHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC--------------EEEEEeccCCCCcccChHH
Q 014769 115 GCKQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV--------------EVRHFDLLPERNWEVDLDA 172 (419)
Q Consensus 115 g~~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~--------------~~~~~~~~~~~~~~~~~~~ 172 (419)
|++++++.+++.+.. +| +.|++.+++|+++...+...+. .+..++.+.......|++.
T Consensus 143 sGseA~~~Alk~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~ 222 (457)
T 3tfu_A 143 SGSVSVEVAAKMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAA 222 (457)
T ss_dssp SHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHH
Confidence 999999999998865 55 5899999999987655444421 2233333222111247888
Q ss_pred HHHhhc---CCccEEEEeC-CCCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEE
Q 014769 173 VEALAD---KNTAAMVIIN-PGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITL 247 (419)
Q Consensus 173 l~~~~~---~~~~~v~i~~-p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~ 247 (419)
|+++++ ++++++++.. ++||+|.++ +.+++++|.++|+++|+++|+||+|.++.+.|..+ .+..++...+++
T Consensus 223 le~~l~~~~~~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~-a~~~~~~~pdii-- 299 (457)
T 3tfu_A 223 FEAQLAQHAGELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALF-AADHAGVSPDIM-- 299 (457)
T ss_dssp HHHHHHHHGGGEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-THHHHTCCCSEE--
T ss_pred HHHHHHhCCCCEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchh-HhHhcCCCceEE--
Confidence 888886 4455556555 689999865 88889999999999999999999999876655432 222333333334
Q ss_pred ecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 248 GSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 248 ~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
||||.++...+|+||+++++ ++++.+... ...+++.+++++.++.++|+.... +...+++++
T Consensus 300 -t~sK~l~gG~~~lG~v~~~~--------~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~---~~~~~~~~~ 367 (457)
T 3tfu_A 300 -CVGKALTGGYLSLAATLCTA--------DVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLG---QDWRTRITE 367 (457)
T ss_dssp -EECGGGGTTSSCCEEEEEEH--------HHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHT---SCHHHHHHH
T ss_pred -EEChhhhCCCcceEEEEEcH--------HHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhh---hHHHHHHHH
Confidence 88998644227999999976 678877521 223567788988888888874221 133455666
Q ss_pred HHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769 322 SAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA 396 (419)
Q Consensus 322 ~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~ 396 (419)
+.+++++.|+++ +++. . .+..|.++++.++.. .+..++...++ ++||.+.|. .+++|+++ ..
T Consensus 368 ~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~l~~~-----~~~~~~~~~l~-~~Gv~v~~~-----~~~lRi~p~~~~ 434 (457)
T 3tfu_A 368 LAAGLTAGLDTARALPAVT-D-VRVCGAIGVIECDRP-----VDLAVATPAAL-DRGVWLRPF-----RNLVYAMPPYIC 434 (457)
T ss_dssp HHHHHHHHHGGGGGSTTEE-E-EEECSSCEEEEESSC-----CCHHHHHHHHH-HTTEECCCB-----TTEEEECCCTTC
T ss_pred HHHHHHHHHHHHhcCCCee-e-eecCCeEEEEEECCc-----ccHHHHHHHHH-HCCeEEEec-----CCEEEEECCCCC
Confidence 666667666654 3333 1 233466777877642 24567777775 469999874 36899997 46
Q ss_pred CHHHHHHHHHHHHHHHHHHh
Q 014769 397 EPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~~~~ 416 (419)
+++++++++++|++++++..
T Consensus 435 t~eei~~~l~~L~~~l~~~~ 454 (457)
T 3tfu_A 435 TPAEITQITSAMVEVARLVG 454 (457)
T ss_dssp CHHHHHHHHHHHHHHHHHC-
T ss_pred CHHHHHHHHHHHHHHHHHhc
Confidence 89999999999999998753
No 162
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.97 E-value=5.1e-30 Score=240.51 Aligned_cols=328 Identities=14% Similarity=0.044 Sum_probs=219.8
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHH
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVE 121 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~ 121 (419)
...+.++.|.. .++++|.+.+++.+.+. ...|.+..+..++++++++++ +. +..++++|+++++.
T Consensus 13 ~~~~~~~~~~~----~~g~~p~v~~ai~~~~~---~~~~~~~~~~~~l~~~la~~~------~~--~~~i~~~~g~~a~~ 77 (359)
T 3pj0_A 13 TPYKLGGNGPR----NVGVLTEALQNIDDNLE---SDIYGNGAVIEDFETKIAKIL------GK--QSAVFFPSGTMAQQ 77 (359)
T ss_dssp CSEESSSSSCC----BHHHHHHHTTTSCTTCB---CCBTTBSHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHH
T ss_pred cchhhcCCCcc----ccCCCHHHHHHHHhhcc---cCcccCCHHHHHHHHHHHHHh------CC--CcEEEeCCHHHHHH
Confidence 34445555531 23567888888776432 235766678899999999998 32 23355578889999
Q ss_pred HHHHHhcCCCCe--EEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc-cc
Q 014769 122 VILSVLARPGAN--VLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC-GN 195 (419)
Q Consensus 122 ~~~~~l~~~gd~--vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt-G~ 195 (419)
.++.+++.+||. |+++.+.|.... ......|.+++.++. .++.+|+++++++ .+++++|++++|+||+ |.
T Consensus 78 ~a~~~~~~~g~~~vvi~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~~~~~d~~~l~~~-~~~~~~v~~~~p~n~~~G~ 153 (359)
T 3pj0_A 78 IALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGT---ANQLLTIDDIKSL-REPVSSVLIELPQREIGGQ 153 (359)
T ss_dssp HHHHHHHHHHTCCEEEECTTCHHHHSSTTHHHHHHCCEEEECSC---TTSCCCHHHHHTC-SSCCSEEEEESSBGGGTSB
T ss_pred HHHHHHHhcCCCcEEEEeccceeeehhcchHHHhcCceEEecCC---cCCCcCHHHHHhc-cCCceEEEEEecccCCCcc
Confidence 999999888887 445545543221 222456888887764 3467999999988 6789999999999998 79
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEccccccccc--CCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTF--GSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF 273 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~--~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~ 273 (419)
+++.+++++|+++|+++|+++|+|++|..+.. .+.....+. .... +++.|+||.++.++ . ||++.++
T Consensus 154 ~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~---~~~d-~~~~s~sK~~~~~~-g-g~~~~~~----- 222 (359)
T 3pj0_A 154 LPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEIC---ALFD-SVYVSFYKGIGGIA-G-AILAGND----- 222 (359)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHH---TTCS-EEEEESSSTTCCSS-C-EEEEECH-----
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhh---ccCC-EEEEeccccCCCcc-e-EEEECCH-----
Confidence 99999999999999999999999999875432 121111111 1112 45568999876653 2 7777654
Q ss_pred chhhHHHHHHhhhc-cccC--CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEe
Q 014769 274 QKSGIIDSIKDCLS-IYSD--IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMV 350 (419)
Q Consensus 274 ~~~~~~~~l~~~~~-~~~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~ 350 (419)
++++.++.... ...+ .....+.++...++. .. +..+++.++++.+.+.|+++|++.+...|..++++|+
T Consensus 223 ---~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~----~~-~~~~~~~~~~~~l~~~L~~~~g~~~~~~~~~~~~~~~ 294 (359)
T 3pj0_A 223 ---DFVQEAKIWKRRYGGDLISLYPYILSADYYFEK----RI-GKMAEYFEAAKGLAERFNSCSGVKTVPEVPVSNMFHV 294 (359)
T ss_dssp ---HHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHH----HG-GGHHHHHHHHHHHHHHHHTSTTEEEESSSCSSSEEEE
T ss_pred ---HHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHH----HH-HHhHHHHHHHHHHHHHHhhCCCceeeccCCcceEEEE
Confidence 67777765432 1111 122222233333432 12 3344567888899999999888873235677778888
Q ss_pred ecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC--CCeEEEEee-----cCHHHHHHHHHHHHHH
Q 014769 351 KLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL--KNWLRIAFC-----AEPSALKDGLGRMKAF 411 (419)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~--~~~~Ris~~-----~~~~~l~~~l~~l~~~ 411 (419)
.++... ..+..++. +.+.++||.+.||..|+. .+++|++++ .+.+++++++++|.+.
T Consensus 295 ~~~~~~---~~~~~~l~-~~l~~~GV~v~~g~~~~~~~~~~~r~~i~~~~~~~~~e~l~~~l~~l~~~ 358 (359)
T 3pj0_A 295 YFENSA---DEIGAILT-KIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKE 358 (359)
T ss_dssp EESSCH---HHHHHHHH-HHHHHHCEECCSCCEEEETTEEEEEEECCTTGGGSCHHHHHHHHHHHHHH
T ss_pred EecCcc---chhHHHHH-HHHHhcCcEecCCccccCCCceEEEEEecCccccCCHHHHHHHHHHHHhc
Confidence 776311 00234454 445778999999987764 368999985 4689999999999875
No 163
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.97 E-value=5.6e-29 Score=234.79 Aligned_cols=324 Identities=13% Similarity=0.110 Sum_probs=229.7
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAV 120 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al 120 (419)
+.++++|+.|.|. ..+ +.+++.+.+... .|.+..+..++|+++++++. .+++++++|+++++
T Consensus 5 ~~~~~~l~~~~~~------~~~-~~~~~~~~~~~~---~~~~~~~~~~l~~~la~~~~--------~~~~~~~~~gt~a~ 66 (374)
T 3uwc_A 5 RVPYSYLERQFAD------IEP-YLNDLREFIKTA---DFTLGAELEKFEKRFAALHN--------APHAIGVGTGTDAL 66 (374)
T ss_dssp CBCSCCHHHHTSS------CHH-HHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHTT--------CSEEEEESCHHHHH
T ss_pred cceeeccccCCCC------chH-HHHHHHHHHHcC---CcccChhHHHHHHHHHHHhC--------CCcEEEeCCHHHHH
Confidence 4567899988753 234 888888877653 46666788999999999982 23889999999999
Q ss_pred HHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCH
Q 014769 121 EVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTY 199 (419)
Q Consensus 121 ~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~ 199 (419)
..++.++ .++||+|+++.|+|+++...++..|.+++.++++ .++.+|++.+++++++++++++ |+||||...+
T Consensus 67 ~~~~~~~~~~~gd~v~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~~~~d~~~l~~~~~~~~~~v~---~~n~~G~~~~- 140 (374)
T 3uwc_A 67 AMSFKMLNIGAGDEVITCANTFIASVGAIVQAGATPVLVDSE--NGYVIDPEKIEAAITDKTKAIM---PVHYTGNIAD- 140 (374)
T ss_dssp HHHHHHTTCCTTCEEEEESSSCHHHHHHHHHTTCEEEEECBC--TTSSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC-
T ss_pred HHHHHHcCCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecC--CCCCcCHHHHHHhCCCCceEEE---EeCCcCCcCC-
Confidence 9999999 8999999999999999999999999999999876 4577899999999987666655 8999999988
Q ss_pred HHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchh
Q 014769 200 HHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 200 ~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+++|.++|+++|+++|+|++|+.+. +++... ..+. .+++.|+| |.++.+|. .|+++++++
T Consensus 141 --~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~---~~~~----d~~~~s~~~~K~l~~~g~-~g~~~~~~~------- 203 (374)
T 3uwc_A 141 --MPALAKIAKKHNLHIVEDACQTILGRINDKFV---GSWG----QFACFSLHPLKNLNVWSD-AGVIITHSD------- 203 (374)
T ss_dssp --HHHHHHHHHHTTCEEEEECTTCTTCEETTEET---TSSS----SEEEEECSSSSSSCCSSC-CEEEEESCH-------
T ss_pred --HHHHHHHHHHcCCEEEEeCCCccCceeCCeec---cccc----cEEEEeCCCCCcCCccce-eEEEEeCCH-------
Confidence 8899999999999999999998643 222211 1111 36777866 99765465 888887652
Q ss_pred hHHHHHHhhhcc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC-CCCCCCC
Q 014769 277 GIIDSIKDCLSI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC-ISCPNKP 342 (419)
Q Consensus 277 ~~~~~l~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p 342 (419)
++.+.++..... ....+.....+. ... .+.+++..++.+++.+.+.+.|+++++ +.....+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~--~~~---~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 278 (374)
T 3uwc_A 204 EYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIA--NRL---MNQLETITEKRRGIAHLYDQSFVDLSEFIDVPVRR 278 (374)
T ss_dssp HHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHH--HHH---GGGHHHHHHHHHHHHHHHHHHTGGGTTTEECCCCC
T ss_pred HHHHHHHHHHhcCccccCccccccccCCCCHHHHHHH--HHH---HHHHHHHHHHHHHHHHHHHHHhccCCCeEEeccCC
Confidence 455555543210 111122222221 111 133566777788888889999988766 5533233
Q ss_pred CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----------C------------CCeEEEEee--cC
Q 014769 343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----------L------------KNWLRIAFC--AE 397 (419)
Q Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~------------~~~~Ris~~--~~ 397 (419)
.++...|..++... .+..++...| .++||.+.++.... . ...+|+++. .+
T Consensus 279 ~~~~~~~~~~~~~~----~~~~~l~~~L-~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t 353 (374)
T 3uwc_A 279 EGVYHVFHIYVLRV----KYRDQLFQYL-KDNGIEVKIHYPIAMHLQPAAKSLGYQQGDFPMAEKHGEAVITLPAHPYLT 353 (374)
T ss_dssp TTEECCCSSEEEEE----TTHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSCHHHHHHHHHEEEECCCTTSC
T ss_pred CCCceeeEEEEEEc----CCHHHHHHHH-HHCCCccccCCCCccccChhhhhcCCccCCCccHHHHHhCEEEccCCCCCC
Confidence 33333322121110 1456666666 66799998876110 0 168999984 68
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 014769 398 PSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~~ 415 (419)
+++++++++.|++++++.
T Consensus 354 ~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 354 EEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999998764
No 164
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.97 E-value=6.6e-29 Score=237.72 Aligned_cols=337 Identities=12% Similarity=0.055 Sum_probs=223.3
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
+.|+|..+. .+.++.+++++.+.+.+.....|+ ......++++.+.+.+.+.+| .++++|++++|
T Consensus 26 ~~i~l~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g--~~~~~i~~~sG- 96 (417)
T 3n0l_A 26 EGLEMIASE------NFTLPEVMEVMGSILTNKYAEGYPGKRYYGGCEFVDEIETLAIERCKKLFN--CKFANVQPNSG- 96 (417)
T ss_dssp HSEECCTTC------CCCCHHHHHHHTBGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHT--CSEEECCCSSH-
T ss_pred cCeeeeccc------CCCCHHHHHHHhhhhhccccccCCCccccccchHHHHHHHHHHHHHHHHhC--CCCcceEeccH-
Confidence 457776553 134789999998877433212232 222334555544444444333 45667888887
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcC--CEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCC
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQ--VEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPG 190 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~ 190 (419)
++++..++.+++++||+|+++.|+|.++.. .+...| ..++.++++ .++.+|++.|+++++ +++++|++++|+
T Consensus 97 t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 174 (417)
T 3n0l_A 97 SQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVE--LDGRIDYEKVREIAKKEKPKLIVCGASA 174 (417)
T ss_dssp HHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCC--TTSSCCHHHHHHHHHHHCCSEEEECCSS
T ss_pred HHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCC--CCCCcCHHHHHHHHHhcCCeEEEECCcc
Confidence 799999999999999999999999987543 333333 444555544 566799999999987 578888888888
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEccccc-ccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
| |...+ +++|.++|+++|+++|+|++|. +..+.+.....+. ...+++.|+||.+ +|+|+||++++++
T Consensus 175 ~--G~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-----~~di~~~s~sK~l--~g~~~G~~~~~~~ 242 (417)
T 3n0l_A 175 Y--ARVID---FAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-----YAHVVSSTTHKTL--RGPRGGIIMTNDE 242 (417)
T ss_dssp C--CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-----TCSEEEEESSTTT--CSCSCEEEEESCH
T ss_pred c--CccCC---HHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-----cceEEEeeCcccc--CCCCeeEEEECCH
Confidence 6 78888 8999999999999999999964 3334433222221 1238889999984 7888999999741
Q ss_pred CCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769 270 NGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV 347 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~ 347 (419)
++.+.++.... ..++++...+.++..++.....+.+++..++++++++.+.+.|++. ++.++..+..+.+
T Consensus 243 -------~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 314 (417)
T 3n0l_A 243 -------ELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDR-KFKLVSDGTDNHL 314 (417)
T ss_dssp -------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred -------HHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CceeccCCCCceE
Confidence 56777765532 2234455555555555544233566788888999999999999884 7763322345668
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC------CCeEEEEee------cCHHHHHHHHHHHHHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL------KNWLRIAFC------AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~------~~~~Ris~~------~~~~~l~~~l~~l~~~~~~~ 415 (419)
+|+.++... .+..++ .++++++||.+.++..+.. ...+|+++. .++++++++++.|++++++.
T Consensus 315 ~~~~~~~~~----~~~~~~-~~~l~~~gi~v~~~~~~~~~~~~~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 389 (417)
T 3n0l_A 315 VLMSFLDRE----FSGKDA-DLALGNAGITANKNTVPGEIRSPFITSGLRLGTPALTARGFKEKEMEIVSNYIADILDDV 389 (417)
T ss_dssp EEEECTTSS----SCHHHH-HHHHHHTTEECEECCCTTCCSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred EEEEcccCC----CCHHHH-HHHHHHcCeEEeccccCCCCcccCCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhcc
Confidence 888775321 134444 4555788999987654322 367999983 36799999999999998653
No 165
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.97 E-value=8.9e-30 Score=244.62 Aligned_cols=343 Identities=12% Similarity=0.042 Sum_probs=227.7
Q ss_pred CCCCCeeeccCCCCCCCCCCC-ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFR-TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
.+|+.++||+.|..... ++ .+|.+.+++.+++.......|+ .....+|++++++++ + ++++|++++|++
T Consensus 50 ~~g~~ylD~~~~~~~~~--lG~~~p~v~~A~~~~~~~~~~~~~~-~~~~~~l~~~la~~~------~-~~~~v~~~~~Gs 119 (429)
T 3k28_A 50 IDGNEYIDYVLSWGPLI--HGHANDRVVEALKAVAERGTSFGAP-TEIENKLAKLVIERV------P-SIEIVRMVNSGT 119 (429)
T ss_dssp TTCCEEEESCGGGTTCT--TCBSCHHHHHHHHHHHHHCSCCSSC-CHHHHHHHHHHHHHS------T-TCSEEEEESSHH
T ss_pred CCCCEEEECCCChhhcc--cCCCCHHHHHHHHHHHhhCcCcCCC-CHHHHHHHHHHHHhC------C-CCCEEEEeCChH
Confidence 35888999999865422 33 5899999999998765433344 345667888888776 2 578999999999
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-CCEEEEEeccCCCCcc------------cChHHHHHhhcC--C
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-QVEVRHFDLLPERNWE------------VDLDAVEALADK--N 180 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~------------~~~~~l~~~~~~--~ 180 (419)
++++.+++.+.. +++.|++.+|+|+++...+... |.....+......+.. -|++.++++++. +
T Consensus 120 ea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~ 199 (429)
T 3k28_A 120 EATMSALRLARGYTGRNKILKFIGCYHGHGDSLLIKAGSGVATLGLPDSPGVPEGVAKNTITVAYNDLESVKYAFEQFGD 199 (429)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEETCCCCSCGGGCSSCCTTC-----CCCTTCCHHHHTTEEEEETTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCcCCCCCcccCceeecCCCCHHHHHHHHHhCCC
Confidence 999999988764 5689999999998765433222 2222211111111110 178888888763 3
Q ss_pred ccEEEEeCCC-CccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC
Q 014769 181 TAAMVIINPG-NPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG 258 (419)
Q Consensus 181 ~~~v~i~~p~-nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G 258 (419)
...+++++|. |++|.+ .+.+++++|.++|++||+++|+||+|.++ ..+... ....++.... +.|+||.++ +|
T Consensus 200 ~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK~~~-~G 273 (429)
T 3k28_A 200 DIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGF-RVAYNC-GQGYYGVTPD---LTCLGKVIG-GG 273 (429)
T ss_dssp GEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTT-TSSTTH-HHHHHTCCCS---EEEECGGGG-TT
T ss_pred CEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-HHHHhCCCCc---eehhhhhhc-CC
Confidence 3455666664 455654 46888999999999999999999999987 544321 1112222222 237899986 59
Q ss_pred ceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc--
Q 014769 259 WRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-- 332 (419)
Q Consensus 259 ~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-- 332 (419)
+|+||+++++ ++++.+... ...+++.+++++.++.++++... ++..++++++++.+.+.|++
T Consensus 274 ~~iG~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~----~~~~~~~~~~~~~l~~~L~~~~ 341 (429)
T 3k28_A 274 LPVGAYGGKA--------EIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLT----PESYVEFERKAEMLEAGLRKAA 341 (429)
T ss_dssp SCCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCC----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEcH--------HHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999865 566666542 22356778999999988888643 45556666666666666654
Q ss_pred --CCCCCCCCCCCceEEEEeecCcccc--------cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHH
Q 014769 333 --IPCISCPNKPEGSMVTMVKLNPWLL--------EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALK 402 (419)
Q Consensus 333 --~~~~~~~~~p~~g~~~~~~~~~~~~--------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~ 402 (419)
.+.+. . .+..|.++++.+..... .......++...+ .++||.+.|+. .+.+|+++..++++++
T Consensus 342 ~~~~~~~-~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~~----~~~~r~~~~~t~e~i~ 414 (429)
T 3k28_A 342 EKHGIPH-H-INRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREM-VEQGVFLPPSQ----FEGLFLSTVHSDADIE 414 (429)
T ss_dssp HHTTCCC-E-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSST----TSCBCCCTTCCHHHHH
T ss_pred hhCCCCE-E-EEeeccEEEEEEecCCcccccccccccHHHHHHHHHHH-HHCCeEEecCC----CCCEEEECCCCHHHHH
Confidence 33332 2 23445566666642110 0000124566666 56799999874 3567998888999999
Q ss_pred HHHHHHHHHHHHHh
Q 014769 403 DGLGRMKAFCQRHT 416 (419)
Q Consensus 403 ~~l~~l~~~~~~~~ 416 (419)
+++++|++++++++
T Consensus 415 ~~l~~l~~~l~~~~ 428 (429)
T 3k28_A 415 ATIAAAEIAMSKLK 428 (429)
T ss_dssp HHHHHHHHHHHTCC
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998753
No 166
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.97 E-value=2.6e-29 Score=243.77 Aligned_cols=350 Identities=13% Similarity=0.085 Sum_probs=234.4
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||..|...... -..+|.+.+++.+++..... |....+..+.+.++++++.+..+ .+.++|++++|+++
T Consensus 51 ~~G~~ylD~~s~~~~~~l-Gh~~p~v~~A~~~~l~~~~~--~~~~~~~~~~~~~la~~l~~~~~--~~~~~v~~~~sGse 125 (476)
T 3i5t_A 51 EDGRRLIDGPAGMWCAQV-GYGRREIVDAMAHQAMVLPY--ASPWYMATSPAARLAEKIATLTP--GDLNRIFFTTGGST 125 (476)
T ss_dssp TTCCEEEETTHHHHTCTT-CBCCHHHHHHHHHHHHHCCC--CCTTTCBCHHHHHHHHHHHTTSS--TTCCEEEEESSHHH
T ss_pred CCCCEEEECCCchhhccC-CCCCHHHHHHHHHHHHhccC--cccCccCCHHHHHHHHHHHhcCC--CCcCEEEEeCchHH
Confidence 358889999988433211 12579999999999876322 22224566888899999887654 34579999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCCE-------------EEEEeccCCCC-cccC-------
Q 014769 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQVE-------------VRHFDLLPERN-WEVD------- 169 (419)
Q Consensus 119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~~-------------~~~~~~~~~~~-~~~~------- 169 (419)
|++.+++.++. .++.|++.+|+|+++...+...+.. +..++...... +..+
T Consensus 126 A~~~Aik~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 205 (476)
T 3i5t_A 126 AVDSALRFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDD 205 (476)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHH
Confidence 99999999863 3579999999999876555443321 22222111000 1112
Q ss_pred -hHHHHHhhc----CCccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc-ccCCCC
Q 014769 170 -LDAVEALAD----KNTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG-LFGSIV 242 (419)
Q Consensus 170 -~~~l~~~~~----~~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~-~~~~~~ 242 (419)
+++|++.+. +++.++++..++|++|. +.+.+++++|.++|+++|+++|+||+|.++.+.|..+ .+. .++..+
T Consensus 206 ~~~~le~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~-~~~~~~~v~p 284 (476)
T 3i5t_A 206 LVQEFEDRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWF-ASEKVFGVVP 284 (476)
T ss_dssp HHHHHHHHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHTTCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCce-eeecccCCCc
Confidence 677887775 23344555555777885 7899999999999999999999999999887666432 222 233222
Q ss_pred cEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHHHH
Q 014769 243 PVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 243 ~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
+++ ++||.++ .| +|+|++++++ ++++.+... ...+++.+++++.++.++|+.... +
T Consensus 285 di~---t~sK~l~-~G~~plg~v~~~~--------~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~ 349 (476)
T 3i5t_A 285 DII---TFAKGVT-SGYVPLGGLAISE--------AVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMER---E 349 (476)
T ss_dssp SEE---EECGGGG-TTSSCCEEEEECH--------HHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHH---T
T ss_pred chh---hhhhhhc-CCCcCeEEEEECH--------HHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHh---H
Confidence 333 6789976 48 9999999965 677777642 224567889999998888875321 2
Q ss_pred HHHHHHHHHHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCC------CHHHHHHHHHHhcCeEeecCCCC
Q 014769 314 KLIDTLRESAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDIN------DDIEFALKLAKEESVIVTPGIYV 384 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~------~~~~~~~~ll~~~gv~v~~g~~~ 384 (419)
+..++++++.+++++.|+++ |.+. . .+..|.++++.+......... ....+...+ .++||.+.|..
T Consensus 350 ~~~~~~~~~~~~l~~~L~~l~~~~~v~-~-v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-- 424 (476)
T 3i5t_A 350 GIVDQAREMADYFAAALASLRDLPGVA-E-TRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERC-FELGLIVRPLG-- 424 (476)
T ss_dssp THHHHHHHHHHHHHHHHHTTTTSTTEE-E-EEEETTEEEEEECCC-----CCHHHHHHHHHHHHHH-HHTTEECEEET--
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCeE-E-EEecCceeEEEEecCccccccccchhHHHHHHHHHH-HHCCCEEEecC--
Confidence 34556666677777776654 3232 1 223355666666532100000 134555666 45699999842
Q ss_pred CCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 385 GLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 385 ~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+++||++ ..+++++++++++|++++++..+
T Consensus 425 ---~~iRi~p~l~~t~e~i~~~l~~l~~~l~~~~~ 456 (476)
T 3i5t_A 425 ---DLCVISPPLIISRAQIDEMVAIMRQAITEVSA 456 (476)
T ss_dssp ---TEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 7999995 57999999999999999987754
No 167
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=99.97 E-value=8.2e-29 Score=235.55 Aligned_cols=286 Identities=17% Similarity=0.111 Sum_probs=201.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh----hcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~ 160 (419)
...+|++.++++. | .+++++++|+++++..++.+++++||+|+++.|+|.++...+. ..|.+++.++.
T Consensus 82 ~~~~l~~~la~~~----g----~~~~~~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~ 153 (414)
T 3ndn_A 82 TVSVFEERLRLIE----G----APAAFATASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDG 153 (414)
T ss_dssp HHHHHHHHHHHHH----T----CSEEEEESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT
T ss_pred HHHHHHHHHHHHH----C----CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCC
Confidence 3456666666665 2 3678999999999999999999999999999999998766554 48999988875
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
+ |++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+. .++ .++
T Consensus 154 ~-------d~~~l~~ai~~~t~~v~le~p~NptG~~~~---l~~i~~la~~~g~~livDe~~~~~~~~----~~~-~~g- 217 (414)
T 3ndn_A 154 D-------DLSQWERALSVPTQAVFFETPSNPMQSLVD---IAAVTELAHAAGAKVVLDNVFATPLLQ----QGF-PLG- 217 (414)
T ss_dssp T-------CHHHHHHHTSSCCSEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHC----CCG-GGT-
T ss_pred C-------CHHHHHHhcCCCCeEEEEECCCCCCCcccc---HHHHHHHHHHcCCEEEEECCCcccccC----Cch-hcC-
Confidence 2 789999999989999999999999999988 889999999999999999999854322 111 222
Q ss_pred CCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHH-HHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 241 IVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIID-SIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~-~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
..+++.|+||.++.+| +++|++++++ +.+. .++... ......++...+++...++ .+....+
T Consensus 218 --~div~~S~sK~l~~~G~~~~G~vv~~~--------~~~~~~l~~~~~~~g~~~~~~~a~~~~~~l~-----~l~~r~~ 282 (414)
T 3ndn_A 218 --VDVVVYSGTKHIDGQGRVLGGAILGDR--------EYIDGPVQKLMRHTGPAMSAFNAWVLLKGLE-----TLAIRVQ 282 (414)
T ss_dssp --CSEEEEETTTTTTCSSCCCCEEEEECH--------HHHTTHHHHHHHHHCCCCCHHHHHHHHHHGG-----GHHHHHH
T ss_pred --CCeEeccCCccccCCCCceEEEEEECH--------HHHHHHHHHHHHHcCCCCCHHHHHHHHHHHH-----HHHHHHH
Confidence 2388899999998888 8999999865 3333 444332 2233445444444433333 3555666
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
+..++++.+.+.|++.|++..+..|. .|.++++.++............+++.+ +..++.++.|
T Consensus 283 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~~~~~~~~~~l-~~~~~~~s~G 361 (414)
T 3ndn_A 283 HSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAKQRAFEVLDKM-RLIDISNNLG 361 (414)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHHHHHHHHHHHC-SSSEECSCCS
T ss_pred HHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccHHHHHHHHHhC-ccceEcCCCC
Confidence 77788888999998877654333332 467888888631000001234555554 5567777777
Q ss_pred CCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 382 IYVG-----------------------LKNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 382 ~~~~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
..+. .++++|||++. |+.+++++.|++++
T Consensus 362 ~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~--e~~~dli~dl~~al 413 (414)
T 3ndn_A 362 DAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGL--EDTDDLIADIDRAL 413 (414)
T ss_dssp CSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCS--SCHHHHHHHHHHHH
T ss_pred CCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCc--CCHHHHHHHHHHhh
Confidence 6542 15789999986 34555666666554
No 168
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.97 E-value=1.1e-28 Score=239.52 Aligned_cols=333 Identities=16% Similarity=0.095 Sum_probs=237.8
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC---CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT---NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~---~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
.++.|+ |.. + ...|.+.+++.+... .++.|.+ .+|..++++.+++++.+..|... .+++++|++++
T Consensus 67 ~~~~lg-~~~---~--~~~p~v~~~~~~~~~--~~~~~~~~~~~~g~~~l~~~l~~~la~~~g~~~---~~~~~~ggt~a 135 (474)
T 1wyu_B 67 TFYPLG-SCT---M--KYNPKLHEEAARLFA--DLHPYQDPRTAQGALRLMWELGEYLKALTGMDA---ITLEPAAGAHG 135 (474)
T ss_dssp SCCCBT-TTC---C--CCCCHHHHHHHHTTS--SCCTTSCGGGCHHHHHHHHHHHHHHHHHHTCSE---EECCCSSHHHH
T ss_pred Cccccc-ccc---c--cCCHHHHHHHHHHHH--hcCCCCchhhChHHHHHHHHHHHHHHHHHCCCc---eeecChHHHHH
Confidence 467777 421 1 234556666655421 1234443 56777888888888888777542 46788999999
Q ss_pred HHHHHHHh----cCCCC-----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCC
Q 014769 120 VEVILSVL----ARPGA-----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPG 190 (419)
Q Consensus 120 l~~~~~~l----~~~gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~ 190 (419)
+..++.++ .++|| +|+++.|+|+.+...+...|.+++.++++ .++.+|+++|++++++++++|++++|
T Consensus 136 ~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~~~~~~~G~~vv~v~~~--~~~~~d~~~L~~~i~~~t~~v~~~~p- 212 (474)
T 1wyu_B 136 ELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNPATASMAGYQVREIPSG--PEGEVDLEALKRELGPHVAALMLTNP- 212 (474)
T ss_dssp HHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHHHHHHHTTCEEEEECBC--TTSSBCHHHHHHHCSTTEEEEEECSS-
T ss_pred HHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhHHHHHHCCCEEEEecCC--CCCCcCHHHHHHhhCCCceEEEEECC-
Confidence 99866554 35787 99999999999999999999999999875 35679999999999888899999998
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCC-C---ceeEEEEe
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVP-G---WRFGWLVT 266 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-G---~r~G~~~~ 266 (419)
||||.+. +++++|.++|+++|+++|+|++|..+.++. .....++ ..+++.|+||+++.| | +|+||+++
T Consensus 213 n~~G~~~--~~l~~i~~l~~~~g~~li~Dea~~~~~~g~---~~~~~~g---~di~~~s~~K~~~~p~g~gG~~~G~~~~ 284 (474)
T 1wyu_B 213 NTLGLFE--RRILEISRLCKEAGVQLYYDGANLNAIMGW---ARPGDMG---FDVVHLNLHKTFTVPHGGGGPGSGPVGV 284 (474)
T ss_dssp CTTSCCC--TTHHHHHHHHHHHTCEEEEEGGGGGGTTTT---CCHHHHT---CSEEECCTTTTTCCCCTTSCCCCCCEEE
T ss_pred CCCcccC--CCHHHHHHHHHHcCCEEEEeCchhhhhccC---CCcccCC---CcEEEEeCccccccCCCCCCCCeEEEEE
Confidence 6899883 239999999999999999999998765421 1222232 348888999998766 4 69999999
Q ss_pred eCCCCccchhhHHHHHHh-h-------------------hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Q 014769 267 NDPNGIFQKSGIIDSIKD-C-------------------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEIC 326 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~-~-------------------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 326 (419)
++ ++++.+.. . ....++.+..++.++..++.....+++++..+++.++++++
T Consensus 285 ~~--------~l~~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~g~~~l~~~~~~~~~~~~~l 356 (474)
T 1wyu_B 285 KA--------HLAPYLPVPLVERGEEGFYLDFDRPKSIGRVRSFYGNFLALVRAWAYIRTLGLEGLKKAAALAVLNARYL 356 (474)
T ss_dssp CG--------GGGGGCCSCEEEECSSCEEEECCCTTCCCCSSSTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cH--------HHHHhCCCCeeeccCCeeEecccCcccCcccccCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 76 23333321 0 00112356667777777776433567888889999999999
Q ss_pred HHHhhcCCCCCCCCCCCceE-EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--CCCeEEEEeec--CHHHH
Q 014769 327 YDGVKEIPCISCPNKPEGSM-VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--LKNWLRIAFCA--EPSAL 401 (419)
Q Consensus 327 ~~~l~~~~~~~~~~~p~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--~~~~~Ris~~~--~~~~l 401 (419)
.+.|+++ ++.+. .+...+ .+++.++. ..+..++..+|++ +||.+ |+..|. ..+++||+++. +++++
T Consensus 357 ~~~L~~~-g~~~~-~~~~~~~~~~~~~~~-----~~~~~~l~~~L~~-~Gi~~-~~~~~~~~~~~~lRis~~~~~t~e~i 427 (474)
T 1wyu_B 357 KELLKEK-GYRVP-YDGPSMHEFVAQPPE-----GFRALDLAKGLLE-LGFHP-PTVYFPLIVKEALMVEPTETEAKETL 427 (474)
T ss_dssp HHHHHHT-TCBCS-SCSSCCSCEEEBCST-----TCCHHHHHHHHHH-TTCCC-CEESCSTTSTTCEEECCCTTSCHHHH
T ss_pred HHHHhhc-CcEec-CCCCcceEEEEEcCC-----CCCHHHHHHHHHH-CCccc-cccccccccCCEEEEEeecCCCHHHH
Confidence 9999987 77732 232222 15556631 1256788888755 59985 666554 36899999964 89999
Q ss_pred HHHHHHHHHHHHH
Q 014769 402 KDGLGRMKAFCQR 414 (419)
Q Consensus 402 ~~~l~~l~~~~~~ 414 (419)
++++++|++++++
T Consensus 428 d~~~~~L~~~~~~ 440 (474)
T 1wyu_B 428 EAFAEAMGALLKK 440 (474)
T ss_dssp HHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHh
Confidence 9999999988753
No 169
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.97 E-value=4.7e-29 Score=241.26 Aligned_cols=335 Identities=13% Similarity=0.080 Sum_probs=216.2
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+++.+|||+.|.+.....+ .+|.+.+++.+++.... .|+ +..++++++++++.+..+ ++++|++++|+++|
T Consensus 55 ~g~~~iD~~~~~~~~~lg~-~~~~v~~a~~~~~~~~~--~~~---~~~~~~~~la~~l~~~~~---~~~~v~~~~gg~eA 125 (453)
T 2cy8_A 55 DGNVYLDFFGGHGALVLGH-GHPRVNAAIAEALSHGV--QYA---ASHPLEVRWAERIVAAFP---SIRKLRFTGSGTET 125 (453)
T ss_dssp TCCEEEESCTTTTSCTTCB-TCHHHHHHHHHHHTTTC--SSC---SSCHHHHHHHHHHHHHCT---TCSEEEEESCHHHH
T ss_pred CCCEEEECcccHhhcccCC-CCHHHHHHHHHHHHhCC--CCC---CCCHHHHHHHHHHHhhCC---CCCEEEEeCCHHHH
Confidence 4677899999965432222 67999999999987643 232 356899999999988764 57899999999999
Q ss_pred HHHHHHH---hcCCCCeEEeeCCCCCCcHHHHhh-----------cCCE------EEEEeccCCCCcccChHHHHHhhcC
Q 014769 120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQR-----------KQVE------VRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 120 l~~~~~~---l~~~gd~vlv~~p~~~~~~~~~~~-----------~g~~------~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
+..++++ +.+ ++.|++.+|+|+++...+.. .|.. +..++. .|++.|++++++
T Consensus 126 ~~~al~~ar~~~~-~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------~d~~~le~~l~~ 197 (453)
T 2cy8_A 126 TLLALRVARAFTG-RRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRP-------DDIEGMREVFAN 197 (453)
T ss_dssp HHHHHHHHHHHHC-CCEEEEECC----------------------------CGGGEEEECT-------TCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhC-CCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCC-------CCHHHHHHHHHh
Confidence 9999998 654 47888999999876443221 1221 112211 378899888863
Q ss_pred --CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC
Q 014769 180 --NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL 255 (419)
Q Consensus 180 --~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~ 255 (419)
....+++++| +||||.+ .+.+++++|.++|++||+++|+||+|+++ +.+.. ..+..++...++ .|+||.++
T Consensus 198 ~~~~~~~vi~ep~~~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK~l~ 272 (453)
T 2cy8_A 198 HGSDIAAFIAEPVGSHFGVTPVSDSFLREGAELARQYGALFILDEVISGF-RVGNH-GMQALLDVQPDL---TCLAKASA 272 (453)
T ss_dssp HGGGEEEEEECSSEHHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTTTT-TTCTT-HHHHHHTCCCSE---EEEEGGGG
T ss_pred cCCCEEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcccc-ccCch-hhhHHhCCCCcE---EEEChhhh
Confidence 2334566666 4779976 47999999999999999999999999977 44321 112122222222 38999976
Q ss_pred CCCceeEEEEeeCCCCccchhhHHHHHHh------hhccccCCchHHHHHHHHHHcc-cchHHHHHHHHHHHHHHHHHHH
Q 014769 256 VPGWRFGWLVTNDPNGIFQKSGIIDSIKD------CLSIYSDIPTFIQGAIPQILEK-TKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 256 ~~G~r~G~~~~~~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~l~~-~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
. |+|+||+++++ ++++.+.. ....+++.+++++.++.++|+. . . ++..++++++++.+.+
T Consensus 273 ~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~-~---~~~~~~~~~~~~~l~~ 339 (453)
T 2cy8_A 273 G-GLPGGILGGRE--------DVMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTIL-E---DDVCAKINDLGQFARE 339 (453)
T ss_dssp T-TSSCEEEEECH--------HHHTTSSSCC---------CCCCHHHHHHHHHHHHHHH-H---TTHHHHHHHHHHHHHH
T ss_pred C-CcceEEEechH--------HHHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHh-h---hhHHHHHHHHHHHHHH
Confidence 4 89999999875 45555544 1122456788888888777764 3 1 2334555666666666
Q ss_pred HhhcCC---CCCCCCCCCceEEEEeecCc-----c----ccc-----CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEE
Q 014769 329 GVKEIP---CISCPNKPEGSMVTMVKLNP-----W----LLE-----DINDDIEFALKLAKEESVIVTPGIYVGLKNWLR 391 (419)
Q Consensus 329 ~l~~~~---~~~~~~~p~~g~~~~~~~~~-----~----~~~-----~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~R 391 (419)
.|+++. ++... .+..|.++|+.++. . ... ...+..++...++ ++||.+.|+ +.+|
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~Gv~v~~~------~~~~ 411 (453)
T 2cy8_A 340 AMNHLFARKGLNWL-AYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALI-LEGVDIGGR------GSVF 411 (453)
T ss_dssp HHHHHHHHTTCCEE-EECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHH-HTTEECBTT------TEEE
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHH-HCCeEEeCC------CCEE
Confidence 665420 23212 34456688888863 1 000 0001356777775 579999653 2477
Q ss_pred EEeecCHHHHHHHHHHHHHHHHHHhc
Q 014769 392 IAFCAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 392 is~~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
+++..+++++++++++|+++++++.+
T Consensus 412 l~~~~t~~~i~~~l~~l~~~l~~~~~ 437 (453)
T 2cy8_A 412 LSAQHEREHVEHLVTTFDRVLDRLAD 437 (453)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeccCCHHHHHHHHHHHHHHHHHHHh
Confidence 77678999999999999999987643
No 170
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.97 E-value=6.3e-29 Score=240.69 Aligned_cols=350 Identities=13% Similarity=0.073 Sum_probs=229.6
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||..|..... .-..+|.+.+++.+++..... .|....+..+.+..+++.+.+..+ .+.++|++++|+++
T Consensus 52 ~~G~~ylD~~s~~~~~~-lGh~~p~v~~A~~~~~~~~~~-~~~~~~~~~~~~~~lae~l~~~~~--~~~~~v~~~~sGse 127 (472)
T 3hmu_A 52 SEGEEILDAMAGLWCVN-IGYGRDELAEVAARQMRELPY-YNTFFKTTHVPAIALAQKLAELAP--GDLNHVFFAGGGSE 127 (472)
T ss_dssp TTCCEEECTTHHHHTCT-TCBCCHHHHHHHHHHHHHCSC-CCSSSSEECHHHHHHHHHHHHHSC--TTEEEEEEESSHHH
T ss_pred CCCCEEEECCCchhhcc-CCCCCHHHHHHHHHHHHhccc-cccccccCCHHHHHHHHHHHHhCC--CCCCEEEEeCCHHH
Confidence 35888999998843211 122579999999999876431 233222334566666666665443 35679999999999
Q ss_pred HHHHHHHHhcC--------CCCeEEeeCCCCCCcHHHHhhcCC------------EEEEEeccC--C-CCcccC------
Q 014769 119 AVEVILSVLAR--------PGANVLLPRPGWPYYEGIAQRKQV------------EVRHFDLLP--E-RNWEVD------ 169 (419)
Q Consensus 119 al~~~~~~l~~--------~gd~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~--~-~~~~~~------ 169 (419)
+++.+++.++. +++.|++.+|+|+++...+...+. .+..++.+. . +++ .+
T Consensus 128 A~~~aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~-~~~~~~~~ 206 (472)
T 3hmu_A 128 ANDTNIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGD-MDPEEFGL 206 (472)
T ss_dssp HHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTT-CCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcc-cCHHHHHH
Confidence 99999999875 468999999999987655544432 233444211 0 111 23
Q ss_pred --hHHHHHhhcC---CccEEEEeCC-CCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCC
Q 014769 170 --LDAVEALADK---NTAAMVIINP-GNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242 (419)
Q Consensus 170 --~~~l~~~~~~---~~~~v~i~~p-~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 242 (419)
++.|++.++. +..++++++| +|++|.+ .+.+++++|.++|+++|+++|+||+|.++...|..+ ....++..+
T Consensus 207 ~~~~~le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~-a~~~~~v~p 285 (472)
T 3hmu_A 207 ARARELEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWF-GTQTMGIRP 285 (472)
T ss_dssp HHHHHHHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSC-HHHHHTCCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccc-hhHHhCCCC
Confidence 6777777752 3345566655 6677765 489999999999999999999999999876665422 222233322
Q ss_pred cEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh---hccccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC---LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
+++ +|||.++..|+|+||+++++ ++++.+... ...+++.+++++.++.++|+.... +...+++
T Consensus 286 di~---t~sK~l~gg~~plG~v~~~~--------~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~---~~~~~~~ 351 (472)
T 3hmu_A 286 HIM---TIAKGLSSGYAPIGGSIVCD--------EVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEE---ENILDHV 351 (472)
T ss_dssp SEE---EECGGGTTTSSCCEEEEEEH--------HHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHH---TTHHHHH
T ss_pred cee---eechhhhcCCcceEEEEECH--------HHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHH---hHHHHHH
Confidence 333 68899776669999999976 688888321 223567889999988888875321 2334445
Q ss_pred H-HHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCccccc--CC-----CCHHHHHHHHHHhcCeEeecCCCCCCCC
Q 014769 320 R-ESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLLE--DI-----NDDIEFALKLAKEESVIVTPGIYVGLKN 388 (419)
Q Consensus 320 ~-~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~~--~~-----~~~~~~~~~ll~~~gv~v~~g~~~~~~~ 388 (419)
+ ++.+++++.|++ +|.+. . .+..|.++++.+...... .. ....++...+ .++||.+.|+. +
T Consensus 352 ~~~~~~~l~~~L~~l~~~~~v~-~-vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l-~~~Gv~v~~~g-----~ 423 (472)
T 3hmu_A 352 RNVAAPYLKEKWEALTDHPLVG-E-AKIVGMMASIALTPNKASRAKFASEPGTIGYICRERC-FANNLIMRHVG-----D 423 (472)
T ss_dssp HHTHHHHHHHHHHGGGGSTTEE-E-EEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHH-HHTTBCCEEET-----T
T ss_pred HHHHHHHHHHHHHHHhcCCCeE-E-EEecCceEEEEEecCccccccccchhHHHHHHHHHHH-HHCCcEEEecC-----C
Confidence 5 555555555544 34333 2 223355666666431100 00 0134566666 45799999863 7
Q ss_pred eEEEEe--ecCHHHHHHHHHHHHHHHHHHh
Q 014769 389 WLRIAF--CAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 389 ~~Ris~--~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++||++ ..+++++++++++|++++++..
T Consensus 424 ~iRi~p~~~~t~e~i~~~l~~l~~~l~~~~ 453 (472)
T 3hmu_A 424 RMIISPPLVITPAEIDEMFVRIRKSLDEAQ 453 (472)
T ss_dssp EEEECCCTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999996 5799999999999999998764
No 171
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.97 E-value=7.7e-28 Score=232.58 Aligned_cols=368 Identities=13% Similarity=-0.025 Sum_probs=248.1
Q ss_pred chhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhC
Q 014769 22 AVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDL 101 (419)
Q Consensus 22 ~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~ 101 (419)
..+..++++.+.+.+.. ++....++..+.+ .+.++.+.+++.+++.... ..|....+..++++.+.+++.+.+
T Consensus 22 g~~~~~v~~~~~~~~~~-~~~~~~~~~~f~~-----~~~~~~v~e~~~~a~~~~~-~~~~~~~~~~~l~~~~~~~la~l~ 94 (452)
T 2dgk_A 22 EMRDDVAFQIINDELYL-DGNARQNLATFCQ-----TWDDENVHKLMDLSINKNW-IDKEEYPQSAAIDLRCVNMVADLW 94 (452)
T ss_dssp CCCHHHHHHHHHHHGGG-SCCCTTBCSCCSC-----CCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHhcC-CCCCccCCCCeeC-----CCchHHHHHHHHHHhccCC-CChhhChhHHHHHHHHHHHHHHHh
Confidence 33455555555444322 2333333333322 2456788888888775432 245555677888999999988888
Q ss_pred CCCCCC---CcEEEcccHHHHHHHHHHHhcC--------CC-----CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769 102 PYKLSA---DDVYVTLGCKQAVEVILSVLAR--------PG-----ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 102 ~~~~~~---~~i~~t~g~~~al~~~~~~l~~--------~g-----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (419)
|.+.+. ..+++|+|+++++..++.+++. +| +.|++++ +|..+...+...|++++.+++++ ++
T Consensus 95 g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~~~~~~~G~~v~~v~~~~-~~ 172 (452)
T 2dgk_A 95 HAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWHKFARYWDVELREIPMRP-GQ 172 (452)
T ss_dssp TCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHHHHHHHTTCEEEECCCBT-TB
T ss_pred CCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHHHHHHHcCceEEEEecCC-CC
Confidence 865332 2499999999999999988754 55 5899999 99999999999999999998764 35
Q ss_pred cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC------CCeEEEccccccccc---CCCCCCCcc
Q 014769 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMG 236 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~ 236 (419)
+.+|+++|++++++++++|++++|+||||.+.+ +++|.++|+++ ++++++|++|+.+.. .+.....+
T Consensus 173 ~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~- 248 (452)
T 2dgk_A 173 LFMDPKRMIEACDENTIGVVPTFGVTYTGNYEF---PQPLHDALDKFQADTGIDIDMHIDAASGGFLAPFVAPDIVWDF- 248 (452)
T ss_dssp CSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCST-
T ss_pred CeECHHHHHHHHhhCCEEEEEEcCCcCCcccCC---HHHHHHHHHHHhhccCCCCcEEEEcccHHHHHHhhCccchhhc-
Confidence 789999999999988999999999999999988 88899999995 999999999998643 22211111
Q ss_pred ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc----------cccCC---chHHHHHHHHH
Q 014769 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS----------IYSDI---PTFIQGAIPQI 303 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~----------~~~~~---~~~~~~a~~~~ 303 (419)
....-.+++.|++|. ++.|+++||++++++..+ .+.+..... ..++. ....+.++...
T Consensus 249 --~~~~~d~~~~~~hK~-~~~~~~~G~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~aal~~ 319 (452)
T 2dgk_A 249 --RLPRVKSISASGHKF-GLAPLGCGWVIWRDEEAL------PQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLR 319 (452)
T ss_dssp --TSTTEEEEEEETTTT-TCCCSSCEEEEESSGGGS------CGGGCEEECCTTCCEEECCSCCSCBCHHHHHHHHHHHH
T ss_pred --CCCCCcEEEECcccc-cCCCCCeEEEEEcCHHHH------HHHhccCccccCCCCCCcccCCCChhHHHHHHHHHHHH
Confidence 111223566788995 788999999999753211 111111000 01111 23344444444
Q ss_pred HcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee
Q 014769 304 LEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT 379 (419)
Q Consensus 304 l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~ 379 (419)
+. .+.+++..++..++++++.+.|+++++++++ .| ....++.++++.... ...+..++...| .++||.+.
T Consensus 320 lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~~~~v~f~~~~~~~-~~~~~~~l~~~L-~~~Gi~v~ 393 (452)
T 2dgk_A 320 LG---REGYTKVQNASYQVAAYLADEIAKLGPYEFI-CTGRPDEGIPAVCFKLKDGED-PGYTLYDLSERL-RLRGWQVP 393 (452)
T ss_dssp HH---HHHHHHHHHHHHHHHHHHHHHHHTTSSEEEE-EECCTTTBSSEEEEEECTTCC-CSCCHHHHHHHH-HHTTCBCC
T ss_pred Hh---HHHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCCCCCCCeEEEEEEecCccc-ccCCHHHHHHHH-HhcCCeee
Confidence 42 3668888899999999999999998777744 33 233455566653100 001236777776 55799654
Q ss_pred cCCCC---CCCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 380 PGIYV---GLKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 380 ~g~~~---~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
..... ....++|++++ .++++++.+++.|+++++++.+
T Consensus 394 ~~~~~~~~~~~~~lRis~~~~~t~e~id~li~~l~~~~~~~~~ 436 (452)
T 2dgk_A 394 AFTLGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSD 436 (452)
T ss_dssp EEECSTTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred eeeCCcccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 32111 12458999995 4689999999999999877643
No 172
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.96 E-value=5.2e-29 Score=239.67 Aligned_cols=337 Identities=12% Similarity=0.065 Sum_probs=221.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.+|||+.|.+...... .+|.+.+++.+++.......|. .++++.+++.+.+..+ ++++|++++|++++
T Consensus 54 ~g~~~lD~~~~~~~~~lG~-~~~~v~~a~~~~~~~~~~~~~~-----~~~~~~l~~~la~~~~---~~~~v~~~~sgseA 124 (434)
T 2epj_A 54 DGARIVDLVLAYGPLILGH-KHPRVLEAVEEALARGWLYGAP-----GEAEVLLAEKILGYVK---RGGMIRFVNSGTEA 124 (434)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSSC-----CHHHHHHHHHHHHHHC---TTCEEEEESSHHHH
T ss_pred CCCEEEEcccchhcccCCC-CCHHHHHHHHHHHHhCCCCCCC-----CHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 4778999999865432222 6899999999998774332332 2344444444444332 56899999999999
Q ss_pred HHHHHHH---hcCCCCeEEeeCCCCCCcHHHHh-h-------------cCC------EEEEEeccCCCCcccChHHHHHh
Q 014769 120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQ-R-------------KQV------EVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 120 l~~~~~~---l~~~gd~vlv~~p~~~~~~~~~~-~-------------~g~------~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
+..+++. +. +++.|++.+|+|+++...+. . .|+ .+..++. .|++.|+++
T Consensus 125 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 196 (434)
T 2epj_A 125 TMTAIRLARGYT-GRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGVPEAVARLTLVTPY-------NDVEALERV 196 (434)
T ss_dssp HHHHHHHHHHHH-CCCEEEEEETCCCCSSGGGSEECC------CEESSTTCCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHhh-CCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCCCCcccCceEecCC-------CCHHHHHHH
Confidence 9999987 44 45789999999987544221 1 122 1333332 278899888
Q ss_pred hcC--CccEEEEeCC-CCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 177 ADK--NTAAMVIINP-GNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 177 ~~~--~~~~v~i~~p-~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
+++ +...+++++| +|+||.+. +.+++++|.++|+++|+++|+||+|+++ ..+.. .....++...++ .||||
T Consensus 197 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~-~~g~~-~~~~~~~~~~di---~s~sK 271 (434)
T 2epj_A 197 FAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGF-RLGLE-GAQGYFNIEGDI---IVLGK 271 (434)
T ss_dssp HHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTT-TSSTT-HHHHHHTCCCSE---EEEEG
T ss_pred HHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhce-eCCcc-hhhHHhCCCCCe---eeecc
Confidence 863 2345566666 56799866 7999999999999999999999999976 33321 111122222222 38899
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
.++. |+|+||+++++ ++++.+... ...+++.+++++.++.++|+.... ++..++++++++++.+
T Consensus 272 ~l~~-G~~~G~v~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~---~~~~~~~~~~~~~l~~ 339 (434)
T 2epj_A 272 IIGG-GFPVGAVAGSR--------EVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEE---EPVYSVSREAAKALEE 339 (434)
T ss_dssp GGGT-TSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHH---SCHHHHHHHHHHHHHH
T ss_pred hhcC-CcceeeeeecH--------HHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHH
Confidence 9876 99999999865 466655541 122456788888888777764221 2345566666666666
Q ss_pred HhhcC---CCCCCCCCCCceEEEEeecCcccccC--------CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769 329 GVKEI---PCISCPNKPEGSMVTMVKLNPWLLED--------INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397 (419)
Q Consensus 329 ~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~ 397 (419)
.|+++ .++... .+..|.++|+.++...... ..+..++...|+ ++||.+.|+.. ..+|+++..+
T Consensus 340 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t 413 (434)
T 2epj_A 340 AASEVLDRTGLPYT-INRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEML-RRGVFIAPSNL----EAVFTGLPHQ 413 (434)
T ss_dssp HHHHHHHHHTCCEE-EEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCS
T ss_pred HHHHHHhhCCCcEE-EEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHH-HCCeEEeccCC----CcEEEeccCC
Confidence 66553 123211 2345668888886410000 002345666664 67999999752 3577777789
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 014769 398 PSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~~~ 416 (419)
++++++++++|+++++++.
T Consensus 414 ~e~i~~~l~~l~~~l~~~~ 432 (434)
T 2epj_A 414 GEALEIAVEGLRSSLKTVL 432 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998753
No 173
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.96 E-value=1.6e-28 Score=235.60 Aligned_cols=333 Identities=13% Similarity=0.057 Sum_probs=222.4
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|..+|||+.|.+.....+ .+|.+.+++.+++..+....| ..++++.+++.+.+..+ ++++|++++|++++
T Consensus 50 ~g~~~iD~~~~~~~~~lG~-~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~l~~~l~~~~~---~~~~v~~~~~g~ea 120 (424)
T 2e7u_A 50 DGNRYLDYVMSWGPLILGH-AHPKVLARVRETLERGLTFGA-----PSPLEVALAKKVKRAYP---FVDLVRFVNSGTEA 120 (424)
T ss_dssp TCCEEEESSGGGTTCTTCB-TCHHHHHHHHHHHHTCSCCSS-----CCHHHHHHHHHHHHHCT---TCCEEEEESSHHHH
T ss_pred CCCEEEEccccccccccCC-CCHHHHHHHHHHHHhCCCCCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHHH
Confidence 4778999998865432223 689999999999876432223 23566666666666543 57899999999999
Q ss_pred HHHHHHH---hcCCCCeEEeeCCCCCCcHHHHhh--------------cCC------EEEEEeccCCCCcccChHHHHHh
Q 014769 120 VEVILSV---LARPGANVLLPRPGWPYYEGIAQR--------------KQV------EVRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 120 l~~~~~~---l~~~gd~vlv~~p~~~~~~~~~~~--------------~g~------~~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
+..+++. +. +++.|++.+|+|+++...+.. .|+ .+..++. .|++.|++.
T Consensus 121 ~~~al~~ar~~~-~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~~~~~~~~-------~d~~~le~~ 192 (424)
T 2e7u_A 121 TMSALRLARGYT-GRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGVPEEYAKLTLVLEY-------NDPEGLREV 192 (424)
T ss_dssp HHHHHHHHHHHH-CCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTCCHHHHTTEEEECT-------TCHHHHHHH
T ss_pred HHHHHHHHHHhh-CCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCCCCccCCceEeCCC-------CCHHHHHHH
Confidence 9999986 44 458899999999986543221 121 1223321 378889888
Q ss_pred hcC--CccEEEEeCCCCc-cccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 177 ADK--NTAAMVIINPGNP-CGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 177 ~~~--~~~~v~i~~p~np-tG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
++. +...+++++|+|+ ||.+. +.+++++|.++ ++||+++|+||+|+++ ..+... ....++...++ .||||
T Consensus 193 l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~-~~g~~~-~~~~~~~~~di---~s~sK 266 (424)
T 2e7u_A 193 LKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGF-RLAFGG-ATELLGLKPDL---VTLGK 266 (424)
T ss_dssp HHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTT-TSSTTH-HHHHHTCCCSE---EEECG
T ss_pred HHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCcccc-ccchhH-HHHHhCCCcch---hhhhh
Confidence 763 3456777788665 89765 79999999999 9999999999999987 333211 11122222222 28999
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHH
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYD 328 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~ 328 (419)
.++ +|+|+||+++++ ++++.+... ...+++.+++++.++.++++.... .++..++++++++.+.+
T Consensus 267 ~l~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~--~~~~~~~~~~~~~~l~~ 335 (424)
T 2e7u_A 267 ILG-GGLPAAAYAGRR--------EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEE--NPGYYAYLEDLGARLEA 335 (424)
T ss_dssp GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHH--CTHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcH--------HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHH
Confidence 987 599999999875 566666541 122456788888888888764221 13456666777777777
Q ss_pred HhhcC---CCCCCCCCCCceEEEEeecCcccccC--------CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecC
Q 014769 329 GVKEI---PCISCPNKPEGSMVTMVKLNPWLLED--------INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAE 397 (419)
Q Consensus 329 ~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~--------~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~ 397 (419)
.|+++ .++... .+..|.++|+.++...... ..+..++...++ ++||.+.|+.. ..+|+++..+
T Consensus 336 ~L~~~~~~~~~~~~-~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gv~v~~~~~----~~~~~~~~~t 409 (424)
T 2e7u_A 336 GLKEVLKEKGLPHT-VNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLL-DRGIYWPPSNF----EAAFLSVAHR 409 (424)
T ss_dssp HHHHHHHHTTCCCE-EEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHH-TTTEECCSSSS----SCEECCTTCC
T ss_pred HHHHHHHhCCCceE-EEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHH-HCCeEEeccCC----CceEeeccCC
Confidence 76653 133212 2445668898886410000 001346666665 68999999753 3477777789
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 398 PSALKDGLGRMKAFC 412 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~ 412 (419)
++++++++++|++++
T Consensus 410 ~~~i~~~l~~l~~~l 424 (424)
T 2e7u_A 410 EEDVEKTLEALRKAL 424 (424)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 999999999998763
No 174
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.96 E-value=1.4e-28 Score=236.21 Aligned_cols=339 Identities=13% Similarity=0.037 Sum_probs=216.7
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.++||+.|.+.... -..+|.+.+++.+++.......| ..+.+..+++++.+..+ ++++|++++|+++
T Consensus 49 ~~g~~~lD~~~~~~~~~l-G~~~p~v~~a~~~~~~~~~~~~~-----~~~~~~~la~~l~~~~~---~~~~v~~~~ggse 119 (427)
T 3fq8_A 49 VDGNRYIDYVGTWGPAIC-GHAHPEVIEALKVAMEKGTSFGA-----PCALENVLAEMVNDAVP---SIEMVRFVNSGTE 119 (427)
T ss_dssp TTSCEEEESSGGGTTCTT-CBTCHHHHHHHHHHHTTCSCCSS-----CCHHHHHHHHHHHHHST---TCSEEEEESSHHH
T ss_pred CCCCEEEECCCchhhhcc-CCCCHHHHHHHHHHHHhCCCcCC-----CCHHHHHHHHHHHHhCC---CCCEEEEeCCHHH
Confidence 357889999999654221 12589999999999876533223 23566666666666554 5789999999999
Q ss_pred HHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHhhc-CCE-------------------EEEEeccCCCCcccChHHHHHh
Q 014769 119 AVEVILSVLA--RPGANVLLPRPGWPYYEGIAQRK-QVE-------------------VRHFDLLPERNWEVDLDAVEAL 176 (419)
Q Consensus 119 al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~~~-g~~-------------------~~~~~~~~~~~~~~~~~~l~~~ 176 (419)
+++.+++... ..++.|++.+|+|+++...+... +.. +..++. -|+++|+++
T Consensus 120 a~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~le~~ 192 (427)
T 3fq8_A 120 ACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPGVPKKTTANTLTTPY-------NDLEAVKAL 192 (427)
T ss_dssp HHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSSSCHHHHTTEEEEET-------TCHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCCCCCcccCceeecCC-------CCHHHHHHH
Confidence 9999995442 24589999999998754433222 111 122221 178899888
Q ss_pred hcC---CccEEEEeCCCCccccCC-CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCC
Q 014769 177 ADK---NTAAMVIINPGNPCGNVF-TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISK 252 (419)
Q Consensus 177 ~~~---~~~~v~i~~p~nptG~~~-~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK 252 (419)
+++ +++++++..++|++|.+. +.+++++|.++|++||+++|+||+|.++ ..+... ....++.... +.|+||
T Consensus 193 l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~-~~g~~~-~~~~~~~~~d---i~t~sK 267 (427)
T 3fq8_A 193 FAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGF-RIAYGG-VQEKFGVTPD---LTTLGK 267 (427)
T ss_dssp HHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBT-TTBTTH-HHHHTTCCCS---EEEECG
T ss_pred HHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccc-ccCcch-hhHhcCCCCC---hhhhhh
Confidence 865 344444444466777665 4677999999999999999999999987 444321 1112222222 348899
Q ss_pred cCCCCCceeEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHH
Q 014769 253 RWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICY 327 (419)
Q Consensus 253 ~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~ 327 (419)
.++ +|+|+||+++++ ++++.+... ...+++.+++++.++.++++... ++..++..+.....++.+.
T Consensus 268 ~~~-~G~~~G~~~~~~--------~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~~~~l~ 338 (427)
T 3fq8_A 268 IIG-GGLPVGAYGGKR--------EIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYEYLDQITKRLSDGLL 338 (427)
T ss_dssp GGG-TTSSCEEEEECH--------HHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHH
T ss_pred hhh-CCcceEEEEEcH--------HHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 987 799999998865 566666542 22345668888888888886432 2233333333333333333
Q ss_pred HHhhcCCCCCCCCCCCceEEEEeecCccccc-----CCCC---HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHH
Q 014769 328 DGVKEIPCISCPNKPEGSMVTMVKLNPWLLE-----DIND---DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPS 399 (419)
Q Consensus 328 ~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~-----~~~~---~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~ 399 (419)
+.+..+ ++. ...+..|+++++.++..... ...+ ..++...+ .++||.+.|+.. ..+|+++..+++
T Consensus 339 ~~~~~~-~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~Gi~v~~~~~----~r~~~~~~~t~e 411 (427)
T 3fq8_A 339 AIAQET-GHA-ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGM-LEQGIYLAPSQF----EAGFTSLAHTEE 411 (427)
T ss_dssp HHHHHT-TCC-CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHH-HHTTEECCSSTT----SCEECCTTCCHH
T ss_pred HHHHhC-CCC-eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHH-HHCCcEEecCCC----CCEEeeCcCCHH
Confidence 333333 222 11344577888887542110 0001 24566666 567999998763 345666677999
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 400 ALKDGLGRMKAFCQR 414 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~ 414 (419)
++++++++|++++++
T Consensus 412 ~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 412 DIDATLAAARTVMSA 426 (427)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999875
No 175
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.96 E-value=1e-27 Score=226.21 Aligned_cols=313 Identities=11% Similarity=0.081 Sum_probs=224.7
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh---cCCCCeEE
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL---ARPGANVL 135 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---~~~gd~vl 135 (419)
++++.+.+++.+.+.... |.+.....++|+++++++ +. +++++|+|+++++..++.++ .++||+|+
T Consensus 10 ~~~~~v~~a~~~~~~~~~---~~~~~~~~~l~~~la~~~------~~--~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl 78 (375)
T 2fnu_A 10 CLDKEDKKAVLEVLNSKQ---LTQGKRSLLFEEALCEFL------GV--KHALVFNSATSALLTLYRNFSEFSADRNEII 78 (375)
T ss_dssp CCCHHHHHHHHHHHTSSC---CSSSHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHSSCCCTTSCEEE
T ss_pred CCCHHHHHHHHHHHHcCc---ccCChHHHHHHHHHHHHh------CC--CeEEEeCCHHHHHHHHHHHhcccCCCCCEEE
Confidence 467889999999886532 333456789999999998 33 38999999999999999999 88999999
Q ss_pred eeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769 136 LPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (419)
Q Consensus 136 v~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (419)
++.|+|+++...+...|.+++.++++++ ..+|++.+++++++++++|++++| ||.+.+ +++|.++|+++|++
T Consensus 79 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~---l~~i~~l~~~~~~~ 150 (375)
T 2fnu_A 79 TTPISFVATANMLLESGYTPVFAGIKND--GNIDELALEKLINERTKAIVSVDY---AGKSVE---VESVQKLCKKHSLS 150 (375)
T ss_dssp ECSSSCTHHHHHHHHTTCEEEECCBCTT--SSBCGGGSGGGCCTTEEEEEEECG---GGCCCC---HHHHHHHHHHHTCE
T ss_pred ECCCccHhHHHHHHHCCCEEEEeccCCC--CCCCHHHHHhhcCcCceEEEEeCC---cCCccC---HHHHHHHHHHcCCE
Confidence 9999999999999999999999887643 268999999998878888888776 999998 88999999999999
Q ss_pred EEEcccccccccCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc----
Q 014769 216 VVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY---- 289 (419)
Q Consensus 216 li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~---- 289 (419)
+|+|++|+.+..... ..+..++ .+.+.|+| |.++. | +|++++.+. +++++.++......
T Consensus 151 li~D~a~~~~~~~~~--~~~~~~~----~i~~~s~s~~K~~~~-g--~g~~~~~~~------~~~~~~~~~~~~~~~~~~ 215 (375)
T 2fnu_A 151 FLSDSSHALGSEYQN--KKVGGFA----LASVFSFHAIKPITT-A--EGGAVVTND------SELHEKMKLFRSHGMLKK 215 (375)
T ss_dssp EEEECTTCTTCEETT--EETTSSS----SEEEEECCTTSSSCC-S--SCEEEEESC------HHHHHHHHHHTBTTEEES
T ss_pred EEEECccccCCeECC--eeccccC----CeEEEeCCCCCCccc-c--CceEEEeCC------HHHHHHHHHHHhcCCccc
Confidence 999999987543211 1122221 26777888 99754 6 788887431 14666665443111
Q ss_pred -------------cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----CceEEEEee
Q 014769 290 -------------SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-----EGSMVTMVK 351 (419)
Q Consensus 290 -------------~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----~~g~~~~~~ 351 (419)
...+.... ++ .... .+++++..++.+++++++.+.|+++|++... .+ ..++++++.
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~-a~-~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~~~ 289 (375)
T 2fnu_A 216 DFFEGEVKSIGHNFRLNEIQS-AL-GLSQ---LKKAPFLMQKREEAALTYDRIFKDNPYFTPL-HPLLKDKSSNHLYPIL 289 (375)
T ss_dssp SSSCEEESSCCCBCCCCHHHH-HH-HHHH---HTTHHHHHHHHHHHHHHHHHHHTTCSSEEES-GGGCSSCCCCSCEEEE
T ss_pred cccccccccccccCCCCHHHH-HH-HHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCCcccc-CCCCCCCcceEEEEEE
Confidence 11222222 22 1111 2346677888899999999999998777633 33 123455677
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCC-------CC-------C-------CCeEEEEee--cCHHHHHHHHHHH
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIY-------VG-------L-------KNWLRIAFC--AEPSALKDGLGRM 408 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~-------~~-------~-------~~~~Ris~~--~~~~~l~~~l~~l 408 (419)
++... ..+..++...| .++||.+..+.. |+ . .+++||+++ .++++++++++.|
T Consensus 290 ~~~~~---~~~~~~l~~~L-~~~gi~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~lRi~~~~~~t~~~i~~~~~~l 365 (375)
T 2fnu_A 290 MHQKF---FTCKKLILESL-HKRGILAQVHYKPIYQYQLYQQLFNTAPLKSAEDFYHAEISLPCHANLNLESVQNIAHSV 365 (375)
T ss_dssp ECGGG---GGGHHHHHHHH-HHTTEECBCCCCCGGGSHHHHHHHCCCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHH
T ss_pred eCccc---cchHHHHHHHH-HHCCCCccccccccccchhhhcCCCccCChHHHHHHhCEEEecCCCCCCHHHHHHHHHHH
Confidence 76321 00355677666 567999883211 11 1 268999996 4899999999999
Q ss_pred HHHHHHH
Q 014769 409 KAFCQRH 415 (419)
Q Consensus 409 ~~~~~~~ 415 (419)
+++++++
T Consensus 366 ~~~~~~~ 372 (375)
T 2fnu_A 366 LKTFESF 372 (375)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9998765
No 176
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.96 E-value=6.7e-28 Score=229.84 Aligned_cols=333 Identities=11% Similarity=0.041 Sum_probs=225.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC------CCCCCHHHH----HHHHHHHHhhCCCCCCCCcE
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA------TNSGIPPAR----RAIADYLSRDLPYKLSADDV 110 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~------~~~g~~~lr----~~ia~~l~~~~~~~~~~~~i 110 (419)
+..+++++.++| .++.+++++.+.+.......|+ ......+++ +++++++ +.+++.|
T Consensus 23 ~~~~~~~~~~~~-------~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~~la~~~------g~~~~~i 89 (405)
T 2vi8_A 23 HAKIELIASENF-------VSRAVMEAQGSVLTNKYAEGYPGRRYYGGCEYVDIVEELARERAKQLF------GAEHANV 89 (405)
T ss_dssp HHSEECCTTCCC-------CCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHH------TCSEEEC
T ss_pred hcceeeccCccc-------CCHHHHHHHHHHhhcccccCCCCccccccchHHHHHHHHHHHHHHHHh------CCCceEE
Confidence 345677765542 2789999998887522111222 111234455 4666665 3344444
Q ss_pred EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH-H--HhhcC--CEEEEEeccCCCCcccChHHHHHhhcC-CccEE
Q 014769 111 YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG-I--AQRKQ--VEVRHFDLLPERNWEVDLDAVEALADK-NTAAM 184 (419)
Q Consensus 111 ~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~-~--~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v 184 (419)
++++| ++++..++.++.++||+|+++.|+|..+.. . +...| ..+..+++++ .++.+|++.+++++++ +++++
T Consensus 90 ~~~sG-t~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v 167 (405)
T 2vi8_A 90 QPHSG-AQANMAVYFTVLEHGDTVLGMNLSHGGHLTHGSPVNFSGVQYNFVAYGVDP-ETHVIDYDDVREKARLHRPKLI 167 (405)
T ss_dssp CCSSH-HHHHHHHHHHHCCTTCEEEEECGGGTCCTTTTCTTSHHHHHSEEEEECBCT-TTCSBCHHHHHHHHHHHCCSEE
T ss_pred EecCc-HHHHHHHHHHhcCCCCEEEEecccccchhcccchhhhccceeEEEeccccc-ccCCcCHHHHHHHHHhcCCeEE
Confidence 45665 999999999999999999999999987743 1 12333 3666666543 3567999999999875 67776
Q ss_pred EEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCC-CCCceeEE
Q 014769 185 VIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWL-VPGWRFGW 263 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~G~r~G~ 263 (419)
++ +|+|+ |...+ +++|.++|+++|+++|+||+|+........ ... .+.. ..+++.|+||.++ .+| ||
T Consensus 168 ~~-~~~~~-~~~~~---l~~i~~l~~~~~~~li~Dea~~~g~~~~~~-~~~-~~~~--~di~~~s~sK~~~g~~g---G~ 235 (405)
T 2vi8_A 168 VA-AAAAY-PRIID---FAKFREIADEVGAYLMVDMAHIAGLVAAGL-HPN-PVPY--AHFVTTTTHKTLRGPRG---GM 235 (405)
T ss_dssp EE-CCSSC-CSCCC---HHHHHHHHHHHTCEEEEECTTTHHHHHTTS-SCC-STTT--CSEEEEESSSTTCCCSC---EE
T ss_pred EE-eCCCC-CccCC---HHHHHHHHHHcCCEEEEEccccccccccCc-CCC-cccc--CCEEEEeccccCCCCCC---eE
Confidence 65 55553 45555 899999999999999999999953322111 111 1111 2288899999986 455 99
Q ss_pred EEeeCCCCccchhhHHHHHHhhh-ccc-cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 014769 264 LVTNDPNGIFQKSGIIDSIKDCL-SIY-SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK 341 (419)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~l~~~~-~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 341 (419)
+++++ ++++.++... ... ++++.....++..+++.....++++..++++++++.+.+.|+++ ++.++ .
T Consensus 236 ~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 305 (405)
T 2vi8_A 236 ILCQE--------QFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNE-GFTLV-S 305 (405)
T ss_dssp EEECH--------HHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEG-G
T ss_pred EEEcH--------HHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeEe-c
Confidence 99864 5777676553 222 33344445555556654323578888999999999999999988 77733 4
Q ss_pred C-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC----CC--CCCeEEEEee------cCHHHHHHHHHHH
Q 014769 342 P-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY----VG--LKNWLRIAFC------AEPSALKDGLGRM 408 (419)
Q Consensus 342 p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~----~~--~~~~~Ris~~------~~~~~l~~~l~~l 408 (419)
| ..++++|+.++... .+..++...| .++||.+.+|.. ++ ..+++|++++ .+++++++++++|
T Consensus 306 ~~~~~~~~~~~~~~~~----~~~~~~~~~l-~~~gi~v~~g~~~~~~~~~~~~~~iRis~~~~~~~~~~~~~i~~~~~~l 380 (405)
T 2vi8_A 306 GGTDNHLLLVDLRPQQ----LTGKTAEKVL-DEVGITVNKNTIPYDPESPFVTSGIRIGTAAVTTRGFGLEEMDEIAAII 380 (405)
T ss_dssp GSCSSSEEEEECGGGT----CCHHHHHHHH-HHHTEECEEECCTTCSSCTTTCSEEEEECHHHHHTTCCHHHHHHHHHHH
T ss_pred CCCCceEEEEEccCCC----CCHHHHHHHH-HHcCceeccCcCccccCCCCCCCceEEeeeeeeecCCCHHHHHHHHHHH
Confidence 3 46888999886421 1455666555 778999999863 22 2578999996 3799999999999
Q ss_pred HHHHHHH
Q 014769 409 KAFCQRH 415 (419)
Q Consensus 409 ~~~~~~~ 415 (419)
++++++.
T Consensus 381 ~~~~~~~ 387 (405)
T 2vi8_A 381 GLVLKNV 387 (405)
T ss_dssp HHHHTCT
T ss_pred HHHHhcc
Confidence 9998654
No 177
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=99.96 E-value=1.6e-27 Score=226.58 Aligned_cols=281 Identities=19% Similarity=0.182 Sum_probs=196.9
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEE
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHF 158 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~ 158 (419)
.....++++.+++++ +.+ +.++++++++++..++.++.++||+|+++.|+|+++...+ ...|.++..+
T Consensus 64 ~~~~~~l~~~la~~~------g~~--~~i~~~sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~ 135 (398)
T 1gc0_A 64 NPTLNLLEARMASLE------GGE--AGLALASGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHV 135 (398)
T ss_dssp CHHHHHHHHHHHHHH------TCS--EEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEE
T ss_pred ChHHHHHHHHHHHHh------CCC--cEEEECCHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEE
Confidence 345678899999887 322 5556666689999999999999999999999999876654 6678888887
Q ss_pred eccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcccc
Q 014769 159 DLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 159 ~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+. .|++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..+.+.. ++ .+
T Consensus 136 ~~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~D~~~~~~~~~~----~~-~~ 200 (398)
T 1gc0_A 136 DM-------ADLQALEAAMTPATRVIYFESPANPNMHMAD---IAGVAKIARKHGATVVVDNTYCTPYLQR----PL-EL 200 (398)
T ss_dssp CT-------TCHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHGGGTCEEEEECTTTHHHHCC----GG-GG
T ss_pred CC-------CCHHHHHHhcCCCCeEEEEECCCCCCccccc---HHHHHHHHHHcCCEEEEECCCcccccCC----ch-hh
Confidence 64 2789999999888999999999999999998 9999999999999999999999765431 12 22
Q ss_pred CCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHH-HHHhhhc--cccCCchHHHHHHHHHHcccchHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIID-SIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCK 314 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~-~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~ 314 (419)
+..+++.|+||.++.+|.|+ ||+++++ +.+. .++.... .+++.++..+.++...++. +..
T Consensus 201 ---~~d~~~~S~sK~~~~~~~~~~G~l~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~ 264 (398)
T 1gc0_A 201 ---GADLVVHSATKYLSGHGDITAGIVVGSQ--------ALVDRIRLQGLKDMTGAVLSPHDAALLMRGIKT-----LNL 264 (398)
T ss_dssp ---TCSEEEEETTTTTTCSSSCCCEEEEECH--------HHHHHHHHTHHHHHTCCCCCHHHHHHHHHHHTT-----HHH
T ss_pred ---CceEEEECCccccCCCCCCeEEEEEECh--------HHHHHHHHHHhhccCCCCCCHHHHHHHHhccch-----HHH
Confidence 23488899999999999998 9998864 3443 4544433 2445677777777666654 344
Q ss_pred HHHHHHHHHHHHHHHhhcCCC--------------CCCCCC--CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEe
Q 014769 315 LIDTLRESAEICYDGVKEIPC--------------ISCPNK--PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIV 378 (419)
Q Consensus 315 ~~~~~~~~~~~l~~~l~~~~~--------------~~~~~~--p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v 378 (419)
..++..++.+.+.+.|++++. +.++.. +..|.++.+.++. ..+.+..++.+.++.+
T Consensus 265 ~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~--------~~~~~~~~l~~~~i~~ 336 (398)
T 1gc0_A 265 RMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKG--------GIGAGRRFMNALQLFS 336 (398)
T ss_dssp HHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETT--------HHHHHHHHHHHCSSSE
T ss_pred HHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECC--------CHHHHHHHHHhCCCce
Confidence 455566666666666665432 221111 1234455556642 3344566667788876
Q ss_pred ec---CCCC----------------------CC-CCeEEEEeec--CHHHHHHHHHHHHH
Q 014769 379 TP---GIYV----------------------GL-KNWLRIAFCA--EPSALKDGLGRMKA 410 (419)
Q Consensus 379 ~~---g~~~----------------------~~-~~~~Ris~~~--~~~~l~~~l~~l~~ 410 (419)
.. |+.. +. ++++|+|++. ++++++.+.+.|++
T Consensus 337 ~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~ 396 (398)
T 1gc0_A 337 RAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKA 396 (398)
T ss_dssp ECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred eccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHh
Confidence 55 3220 11 4799999974 45666666666654
No 178
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.96 E-value=8.7e-29 Score=240.22 Aligned_cols=295 Identities=11% Similarity=0.058 Sum_probs=210.4
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCe---EEeeCCCCCCcH----HHHhhcCCEEEE
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN---VLLPRPGWPYYE----GIAQRKQVEVRH 157 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~---vlv~~p~~~~~~----~~~~~~g~~~~~ 157 (419)
-..++++.+++++ +.++++|++|+|++++++.++.++.++|+. |+++.|+|++.. ..++..|.++..
T Consensus 112 ~~~~l~~~la~~~------g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~ 185 (465)
T 3e9k_A 112 GDESIVGLMKDIV------GANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEE 185 (465)
T ss_dssp TTHHHHGGGHHHH------TCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHH
T ss_pred hHHHHHHHHHHHc------CCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCccee
Confidence 3467888888887 567899999999999999999999876655 999999998743 356667877521
Q ss_pred --Eecc-CCCCcccChHHHHHhhc---CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCC
Q 014769 158 --FDLL-PERNWEVDLDAVEALAD---KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIP 231 (419)
Q Consensus 158 --~~~~-~~~~~~~~~~~l~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 231 (419)
+.+. .++++.+|+++++++++ +++++|++++|+||||.+++ +++|.++|+++|+++|+|++|+... .
T Consensus 186 ~~v~~~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~---l~~i~~la~~~g~~vi~D~a~~~g~----~ 258 (465)
T 3e9k_A 186 SMRMIKPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFN---IPAITKAGQAKGCYVGFDLAHAVGN----V 258 (465)
T ss_dssp HEEEECCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCC---HHHHHHHHHHTTCEEEEECTTTTTT----S
T ss_pred eeEEEecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeec---HHHHHHHHHHcCCEEEEEhhhhcCC----c
Confidence 1111 23456789999999986 57889999999999999999 8899999999999999999998622 2
Q ss_pred CCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-------------------------h
Q 014769 232 YTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-------------------------L 286 (419)
Q Consensus 232 ~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-------------------------~ 286 (419)
...+..++. .++++|++|.+.....++|++++++. +.+.+... .
T Consensus 259 ~~~~~~~~~---D~~~~s~~K~l~~gp~~~g~l~~~~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 327 (465)
T 3e9k_A 259 ELYLHDWGV---DFACWCSYKYLNAGAGGIAGAFIHEK--------HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVC 327 (465)
T ss_dssp CCCHHHHTC---CEEEECSSSTTCCCTTCCCEEEECGG--------GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGG
T ss_pred CCchhhcCC---CEEEECcccccccCCCceEEEEEcHH--------HHhhcCCcccCccCCCCCcccccCCCcCcCCChH
Confidence 222223333 38889999997433346899988652 21111100 0
Q ss_pred -ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----------CCCCCCCCCC----ceEEEEee
Q 014769 287 -SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----------PCISCPNKPE----GSMVTMVK 351 (419)
Q Consensus 287 -~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------~~~~~~~~p~----~g~~~~~~ 351 (419)
...++++.....++..+++......+++.+++++++++++.+.|+++ +++.++ .|. .|.++++.
T Consensus 328 ~~~~gt~~~~~~~a~~aal~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~g~~~~-~p~~~~~~g~~~~~~ 406 (465)
T 3e9k_A 328 GFRISNPPILLVCSLHASLEIFKQATMKALRKKSVLLTGYLEYLIKHNYGKDKAATKKPVVNII-TPSHVEERGCQLTIT 406 (465)
T ss_dssp GGCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCC---------CEEEC-SCSSGGGBCSCEEEE
T ss_pred HhccCCccHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCeEEe-CCCCHhhcccEEEEE
Confidence 00125666666666666654333347888889999999999999874 577733 444 36677777
Q ss_pred cCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e--cCHHHHHHHHHHHHHHHHHHh
Q 014769 352 LNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-C--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
++. +..++...| .++||.+.. ..++++|+++ . .++++++++++.|++++++..
T Consensus 407 ~~~-------~~~~l~~~L-~~~Gi~v~~----~~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~~ 462 (465)
T 3e9k_A 407 FSV-------PNKDVFQEL-EKRGVVCDK----RNPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSAE 462 (465)
T ss_dssp ECC-------TTCCHHHHH-HTTTEECEE----ETTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC--
T ss_pred ecC-------CHHHHHHHH-HHCCEEEec----CCCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhcc
Confidence 762 234566666 566999863 3468999997 3 589999999999999987643
No 179
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=2.4e-27 Score=224.54 Aligned_cols=284 Identities=17% Similarity=0.196 Sum_probs=201.5
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~ 159 (419)
.+..++++++++++ +.+ +.|++++| ++++..++.++.++||+|+++.|+|++... .++..|.++..++
T Consensus 52 ~~~~~l~~~la~~~------~~~-~~i~~~sG-t~a~~~~~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 123 (386)
T 1cs1_A 52 PTRDVVQRALAELE------GGA-GAVLTNTG-MSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVD 123 (386)
T ss_dssp HHHHHHHHHHHHHH------TCS-EEEEESSH-HHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEEC
T ss_pred ccHHHHHHHHHHHh------CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeC
Confidence 46789999999998 333 56666655 999999999999999999999999987433 2466788888876
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
.+ |++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+.. ++ .+
T Consensus 124 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~l~~~~~~~li~De~~~~~~~~~----~~-~~- 187 (386)
T 1cs1_A 124 QG-------DEQALRAALAEKPKLVLVESPSNPLLRVVD---IAKICHLAREVGAVSVVDNTFLSPALQN----PL-AL- 187 (386)
T ss_dssp TT-------CHHHHHHHHHTCCSEEEEECSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTCC----GG-GG-
T ss_pred CC-------CHHHHHHhhccCCcEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccCC----cc-cc-
Confidence 42 789999999888999999999999999998 8999999999999999999999865431 12 22
Q ss_pred CCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
+..+++.|+||.++.+|.|+ ||++++++ ++++.++.... .+.+.++..+.++...++. +....+
T Consensus 188 --~~di~~~s~sK~~~~~~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~ 253 (386)
T 1cs1_A 188 --GADLVLHSCTKYLNGHSDVVAGVVIAKDP-------DVVTELAWWANNIGVTGGAFDSYLLLRGLRT-----LVPRME 253 (386)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHTCBCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred --CceEEEEcCcccccCCCCceeEEEEeCcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhcccH-----HHHHHH
Confidence 34588999999998999987 99998641 46666765543 2345677777666555543 444555
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
.+.++.+.+.+.|++++.+..+..| ..|.++.+.++. ...++ ...+.++||.+.+.
T Consensus 254 ~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~-~~~l~~~gi~~~~~ 325 (386)
T 1cs1_A 254 LAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDG-------DEQTL-RRFLGGLSLFTLAE 325 (386)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESS-------CHHHH-HHHHHTCSSSEEBS
T ss_pred HHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECC-------CHHHH-HHHHHhCCcceEcc
Confidence 6677777777777765432111011 124455555642 23344 45557889988642
Q ss_pred CCCC--------------------------C-CCeEEEEeecCHHHHHHHHHHHHHHHHHHh
Q 014769 382 IYVG--------------------------L-KNWLRIAFCAEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 382 ~~~~--------------------------~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~~ 416 (419)
+ ++ . ++++|++++. ++.++.++++.+++++..
T Consensus 326 ~-~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~--~~~~~~i~~l~~al~~~~ 384 (386)
T 1cs1_A 326 S-LGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGI--EDGEDLIADLENGFRAAN 384 (386)
T ss_dssp C-CCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHHT
T ss_pred c-CCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEcc--CCHHHHHHHHHHHHHHhh
Confidence 1 11 1 4799999976 345556666666665543
No 180
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.96 E-value=6.8e-29 Score=239.51 Aligned_cols=338 Identities=13% Similarity=0.091 Sum_probs=220.1
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHH-H-HHHH---HHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcc
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAE-D-AIVD---AVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTL 114 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~-~-a~~~---~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~ 114 (419)
+|..++||+.|.+...... .+|.+. + ++.+ ++.... .|++ .+..+.+..+++.+.+..+ ..++++|++|+
T Consensus 52 ~g~~ylD~~~~~~~~~lG~-~~p~v~~~~A~~~~~~~~~~~~--~~~~-~~~~~~~~~la~~la~~~~-~~~~~~v~~~~ 126 (449)
T 2cjg_A 52 TGRRYLDMFTFVASSALGM-NPPALVDDREFHAELMQAALNK--PSNS-DVYSVAMARFVETFARVLG-DPALPHLFFVE 126 (449)
T ss_dssp TCCEEEESSHHHHTCSSCB-SCHHHHTCHHHHHHHHHHHTCC--CCTT-TCCCHHHHHHHHHHHHHHC-CTTCCEEEEES
T ss_pred CCcEEEEccCCccccCCCC-CCHHHHHHHHHHHHHHHHHhcC--CCCc-ccCCHHHHHHHHHHHHhcC-CCCCCEEEEeC
Confidence 3667889887764322222 478999 8 9999 776543 2331 1223344444444444333 24678999999
Q ss_pred cHHHHHHHHHHHhc---C----------C-CCeEEeeCCCCCCcHHHHhhc---------CC-----EEEEEeccCCCCc
Q 014769 115 GCKQAVEVILSVLA---R----------P-GANVLLPRPGWPYYEGIAQRK---------QV-----EVRHFDLLPERNW 166 (419)
Q Consensus 115 g~~~al~~~~~~l~---~----------~-gd~vlv~~p~~~~~~~~~~~~---------g~-----~~~~~~~~~~~~~ 166 (419)
|+++|++.+++.+. . + ||+|++.+|+|+++...+... +. ++..++.+.....
T Consensus 127 ~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 206 (449)
T 2cjg_A 127 GGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLTNTKPTITARFPKFDWPRIDAPYMRPGLD 206 (449)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTCCSCHHHHTTSCCCCCCEECCCCCCTTCC
T ss_pred chHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhcCCchhhcccCCCCCCCcEEEcCCCchhh
Confidence 99999999987653 2 2 899999999999764432221 12 3344443210011
Q ss_pred --------ccChHHHHHhhc---CCccEEEEeCC-CCccc-cCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC
Q 014769 167 --------EVDLDAVEALAD---KNTAAMVIINP-GNPCG-NVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT 233 (419)
Q Consensus 167 --------~~~~~~l~~~~~---~~~~~v~i~~p-~nptG-~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 233 (419)
..+++.|++.++ +++++ ++++| +|||| .+.+.+++++|.++|++||+++|+||+|+++.+.|...
T Consensus 207 ~~~~~~~~~~~~~~le~~i~~~~~~~~~-vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~- 284 (449)
T 2cjg_A 207 EPAMAALEAEALRQARAAFETRPHDIAC-FVAEPIQGEGGDRHFRPEFFAAMRELCDEFDALLIFDEVQTGCGLTGTAW- 284 (449)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTTEEE-EEECSEETTTTCEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS-
T ss_pred ccccchhhHHHHHHHHHHHHhcCCceEE-EEEeCcCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccccCCCccCcce-
Confidence 245566888774 34444 55566 68999 58999999999999999999999999999876655421
Q ss_pred CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHH-----Hh-hhccccCCchHHHHHHHHHHccc
Q 014769 234 PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSI-----KD-CLSIYSDIPTFIQGAIPQILEKT 307 (419)
Q Consensus 234 ~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l-----~~-~~~~~~~~~~~~~~a~~~~l~~~ 307 (419)
.+..++...+++ |+||.+ |+||+++++ ++++.+ .. ....+++.+++++.++.++|+..
T Consensus 285 ~~~~~~~~~di~---t~sK~l-----~iG~~~~~~--------~~~~~l~~~~~~~~~~~~t~~~n~~~~~aa~aal~~~ 348 (449)
T 2cjg_A 285 AYQQLDVAPDIV---AFGKKT-----QVCGVMAGR--------RVDEVADNVFAVPSRLNSTWGGNLTDMVRARRILEVI 348 (449)
T ss_dssp THHHHTCCCSEE---EECGGG-----SSEEEEECG--------GGGGSTTCTTTSTTSSCCSSSSCHHHHHHHHHHHHHH
T ss_pred eecccCCCceEE---EecCcc-----cEEEEEECH--------HHhhhhhhcccCCcccccCCCCCHHHHHHHHHHHHHH
Confidence 222222222333 789986 699999865 344431 11 12235677888998888888753
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhhc----CCC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC
Q 014769 308 KEDFFCKLIDTLRESAEICYDGVKE----IPC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI 382 (419)
Q Consensus 308 ~~~~~~~~~~~~~~~~~~l~~~l~~----~~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~ 382 (419)
.. ++..++++++++++.+.|++ ++. +. ...+. |.|+++.++.. .+..++...|+ ++||.+.|+.
T Consensus 349 ~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~-~~~~~-g~~~~~~~~~~-----~~~~~~~~~l~-~~Gv~v~~~g 417 (449)
T 2cjg_A 349 EA---EGLFERAVQHGKYLRARLDELAADFPAVVL-DPRGR-GLMCAFSLPTT-----ADRDELIRQLW-QRAVIVLPAG 417 (449)
T ss_dssp HH---HTHHHHHHHHHHHHHHHHHHHHHHSTTTSE-EEEEE-TTEEEEECSSH-----HHHHHHHHHHH-HTTEECEEET
T ss_pred Hh---ccHHHHHHHHHHHHHHHHHHHHhhCCCcee-eEeec-cEEEEEEECCh-----HHHHHHHHHHH-HCCeEEecCC
Confidence 22 23456667777777777764 343 33 22333 55667777632 12456777776 5799999873
Q ss_pred CCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 383 YVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 383 ~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+++|+++ ..+++++++++++|+++++++
T Consensus 418 ----~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 448 (449)
T 2cjg_A 418 ----ADTVRFRPPLTVSTAEIDAAIAAVRSALPVV 448 (449)
T ss_dssp ----TTEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 58999977 468999999999999998764
No 181
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.96 E-value=4.9e-28 Score=229.73 Aligned_cols=324 Identities=14% Similarity=0.107 Sum_probs=222.0
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCC-CCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYA-TNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~-~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
-+++++++.|.|. .++.+.+++.+.+... .|. +..+..++|+++++++. . +++++++|++++
T Consensus 21 ~~~~~~l~~~~p~------~~~~~~~a~~~~~~~~---~~~~~~~~~~~l~~~la~~~~------~--~~~i~~~~gt~a 83 (391)
T 3dr4_A 21 MSDLPRISVAAPR------LDGNERDYVLECMDTT---WISSVGRFIVEFEKAFADYCG------V--KHAIACNNGTTA 83 (391)
T ss_dssp -------CCCCCC------CCSSHHHHHHHHHHHT---CCSSCSHHHHHHHHHHHHHHT------C--SEEEEESSHHHH
T ss_pred cCCCceeccCCCC------CCHHHHHHHHHHHHcC---CccCCChHHHHHHHHHHHHhC------C--CcEEEeCCHHHH
Confidence 4567889998863 2367778888877653 344 56788999999999983 2 388899999999
Q ss_pred HHHHHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCC
Q 014769 120 VEVILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 120 l~~~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~ 198 (419)
+..++.++ .++||+|+++.|+|+++...+...|.+++.+++++ +++.+|++.+++++++++++|+ |+||||...+
T Consensus 84 l~~~l~~~~~~~gd~vl~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~ 159 (391)
T 3dr4_A 84 LHLALVAMGIGPGDEVIVPSLTYIASANSVTYCGATPVLVDNDP-RTFNLDAAKLEALITPRTKAIM---PVHLYGQICD 159 (391)
T ss_dssp HHHHHHHHTCCTTCEEEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCGGGSGGGCCTTEEEEC---CBCGGGCCCC
T ss_pred HHHHHHHcCCCCcCEEEECCCchHHHHHHHHHCCCEEEEEecCc-cccCcCHHHHHHhcCCCceEEE---EECCCCChhh
Confidence 99999999 89999999999999999999999999999998864 3578999999999987776665 5789999988
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccch
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
+++|.++|+++|+++|+|++|+.+. +.+.. ...+. .+.+.||| |. ++|.+.|+++++++
T Consensus 160 ---~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----di~~~S~s~~K~--l~~g~gg~~~~~~~------ 221 (391)
T 3dr4_A 160 ---MDPILEVARRHNLLVIEDAAEAVGATYRGKK---SGSLG----DCATFSFFGNAI--ITTGEGGMITTNDD------ 221 (391)
T ss_dssp ---HHHHHHHHHHTTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECBTTSS--SCCBSCEEEEESCH------
T ss_pred ---HHHHHHHHHHcCCEEEEECcccccceECCee---ecccC----CEEEEECCCCCc--CCcCCeEEEEECCH------
Confidence 8899999999999999999998633 22211 11221 16667777 66 45567899888652
Q ss_pred hhHHHHHHhhhccccC-------------CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC-
Q 014769 276 SGIIDSIKDCLSIYSD-------------IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNK- 341 (419)
Q Consensus 276 ~~~~~~l~~~~~~~~~-------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~- 341 (419)
++.+.++........ .......++..... .+.+++..++.+++.+.+.+.|+++ ++.....
T Consensus 222 -~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~---~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~ 296 (391)
T 3dr4_A 222 -DLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQ---LERVDEHLAARERVVGWYEQKLARL-GNRVTKPH 296 (391)
T ss_dssp -HHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHH---HHTHHHHHHHHHHHHHHHHHHHGGG-TTSEECCC
T ss_pred -HHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcC-CccccCcC
Confidence 355555544321100 11112222222222 2345667777888888889999887 6663322
Q ss_pred -C----CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC--------------------CCCeEEEEee-
Q 014769 342 -P----EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG--------------------LKNWLRIAFC- 395 (419)
Q Consensus 342 -p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~--------------------~~~~~Ris~~- 395 (419)
+ ..++.+++.++.. ...+..++...| .++||.+.++.... ....+|+++.
T Consensus 297 ~~~~~~~~~~~~~i~~~~~---~~~~~~~l~~~L-~~~GI~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~ 372 (391)
T 3dr4_A 297 VALTGRHVFWMYTVRLGEG---LSTTRDQVIKDL-DALGIESRPVFHPMHIMPPYAHLATDDLKIAEACGVDGLNLPTHA 372 (391)
T ss_dssp CCTTSCCCCSSEEEEECSS---CSSCHHHHHHHH-HHTTCCCEECCCCGGGSGGGGGGCCTTCHHHHHHHHHEEEECCCT
T ss_pred CCCCCcceeEEEEEEECCc---cchhHHHHHHHH-HHCCCceeecCCccccChhhhhcCcCCChHHHHHHhCeEEccCCC
Confidence 1 1222345556531 012466777776 56799999875210 0357999984
Q ss_pred -cCHHHHHHHHHHHHHHH
Q 014769 396 -AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 396 -~~~~~l~~~l~~l~~~~ 412 (419)
.++++++++++.|++++
T Consensus 373 ~~t~edi~~~~~~l~~~l 390 (391)
T 3dr4_A 373 GLTEADIDRVIAALDQVL 390 (391)
T ss_dssp TCCHHHHHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHHHHh
Confidence 58999999999998654
No 182
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.96 E-value=4.9e-29 Score=242.22 Aligned_cols=351 Identities=15% Similarity=0.138 Sum_probs=222.0
Q ss_pred CCCeeeccCCCCCC--CCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 41 PRPVVPLGYGDPTA--FPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 41 ~~~~i~l~~g~~~~--~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
+.++++|..|.+-. .+.+++ +.+.+++.+++..+. ..|+++.+..++|+++++++. .+++++|+|+++
T Consensus 31 g~~~~~~~~~~~ylD~~~~~~~-~~v~~a~~~~l~~~~-~~y~~~~~~~~l~~~la~~~~--------~~~v~~t~~gt~ 100 (467)
T 2oqx_A 31 GMNPFLLDSEDVFIDLLTDSGT-GAVTQSMQAAMMRGD-EAYSGSRSYYALAESVKNIFG--------YQYTIPTHQGRG 100 (467)
T ss_dssp TSCGGGSCGGGCSEECSCCSSC-SCCCHHHHHHTTSCC-CCSSSCHHHHHHHHHHHHHHC--------CSEEEEEC--CC
T ss_pred CCCceeccCCCeeEecccCCCc-HHHHHHHHHHhccCc-ceeccCchhHHHHHHHHHHhC--------cCcEEEcCCcHH
Confidence 55556666654310 011223 677788888776543 368877788999999999982 368999999999
Q ss_pred HHHHHHHHhcCC-----C----CeEEeeCCCCCCcHHHHhhcCCEEEEEec----cCC----CCcccChHHHHHhhcC--
Q 014769 119 AVEVILSVLARP-----G----ANVLLPRPGWPYYEGIAQRKQVEVRHFDL----LPE----RNWEVDLDAVEALADK-- 179 (419)
Q Consensus 119 al~~~~~~l~~~-----g----d~vlv~~p~~~~~~~~~~~~g~~~~~~~~----~~~----~~~~~~~~~l~~~~~~-- 179 (419)
|+..++.+++++ | |.|++..+.|..+.......|..+..... +.. .++.+|++.|++++++
T Consensus 101 A~~~al~~~~~~~~~~~G~~~~d~Ii~~~~h~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~ 180 (467)
T 2oqx_A 101 AEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTTQGHSQINGCTVRNVYIKEAFDTGVRYDFKGNFDLEGLERGIEEVG 180 (467)
T ss_dssp SHHHHHHHHHHHHHHHHCCCTTTCEEEESSCCHHHHHHHHHTTCEEEECBCTTTTCTTSCCTTTTCBCHHHHHHHHHHHC
T ss_pred HHHHHHHHHhccccccCCCCccceEEecccccccchhhhhccCcceeeccccccccCCCCCCccCCcCHHHHHHHHHhcC
Confidence 999999999888 8 99887743333333444555655443211 111 2356899999999873
Q ss_pred --CccEEEEeCCCCcc-ccCCCHHHHHHHHHHHHhCCCeEEEcccccc----------cccCCCCCCCccc--cCCCCcE
Q 014769 180 --NTAAMVIINPGNPC-GNVFTYHHLQEIAEMARKLRVMVVADEVYGH----------LTFGSIPYTPMGL--FGSIVPV 244 (419)
Q Consensus 180 --~~~~v~i~~p~npt-G~~~~~~~l~~i~~~~~~~~~~li~De~~~~----------~~~~~~~~~~~~~--~~~~~~~ 244 (419)
++++|++++|+||| |.+++.+++++|.++|++||+++|+|+++.. ..+.+.....+.. +... .
T Consensus 181 ~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~-d- 258 (467)
T 2oqx_A 181 PNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAENAYFIKQREAEYKDWTIEQITRETYKYA-D- 258 (467)
T ss_dssp GGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHHHCGGGTTSCHHHHHHHHGGGC-S-
T ss_pred CCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhhhhhhcccccccccCccHHHHhhhhhccC-C-
Confidence 68899999999998 8999999999999999999999999976643 1222322111110 0111 1
Q ss_pred EEEecCCCcCCCC-CceeEEEEeeCCCCccchhhHHHHHHhhhcc------ccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 245 ITLGSISKRWLVP-GWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI------YSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 245 i~~~s~sK~~~~~-G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
+++.|+||.++++ | ||++++++. +. +.+..++..... ....+.....++...++.... ++..+
T Consensus 259 ~~~~s~sK~~g~~~G---g~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~l~~~~~---~~~~~ 328 (467)
T 2oqx_A 259 MLAMSAKKDAMVPMG---GLLCMKDDS-FF---DVYTECRTLCVVQEGFPTYGGLEGGAMERLAVGLYDGMN---LDWLA 328 (467)
T ss_dssp EEEEESSSTTCCSSC---EEEEECSGG-GH---HHHHHHHHHHHHTTSSCCCCCCCHHHHHHHHHHHHHTTC---HHHHH
T ss_pred eEEEecccccCCCCc---eEEEecChh-HH---HHHHHHHHhhhccCCcccccchhhhHHHHHHHhhHhhhh---HHHHH
Confidence 4577999998766 4 777775410 11 133344332211 111222222222222222111 12334
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCc--ccccCCC-CHHHHHHHHHHhcCeEeecCCCC--C-------
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNP--WLLEDIN-DDIEFALKLAKEESVIVTPGIYV--G------- 385 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~--~~~~~~~-~~~~~~~~ll~~~gv~v~~g~~~--~------- 385 (419)
+..++++.+.+.|+++ ++. +. |.+++++|+.++. ....... +...+...|+.++||.+.|+..| +
T Consensus 329 ~~~~~~~~l~~~L~~~-~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~g~ 405 (467)
T 2oqx_A 329 YRIAQVQYLVDGLEEI-GVV-CQ-QAGGHAAFVDAGKLLPHIPADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKTGK 405 (467)
T ss_dssp HHHHHHHHHHHHHHHT-TCC-EE-EECSSCEEEEHHHHSTTSCGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTTCS
T ss_pred HHHHHHHHHHHHHHHC-CCe-ee-cCCceEEEEechhhcccCCcccccHHHHHHHHHHhcCceecccccccccccccccc
Confidence 4567788888888887 777 44 7778889988742 0000000 13445667757889999985532 1
Q ss_pred ----CCCeEEEEee---cCHHHHHHHHHHHHHHHHHHh
Q 014769 386 ----LKNWLRIAFC---AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 386 ----~~~~~Ris~~---~~~~~l~~~l~~l~~~~~~~~ 416 (419)
..+++|++++ .+++++++++++|++++++..
T Consensus 406 ~~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~~l~~~~ 443 (467)
T 2oqx_A 406 QLPCPAELLRLTIPRATYTQTHMDFIIEAFKHVKENAA 443 (467)
T ss_dssp BCCCSCCEEEECCCTTTSCHHHHHHHHHHHHHHHHSGG
T ss_pred cccCccCeEEEEecCCCCCHHHHHHHHHHHHHHHhhhh
Confidence 1379999996 789999999999999997653
No 183
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.3e-27 Score=227.50 Aligned_cols=338 Identities=13% Similarity=0.066 Sum_probs=211.7
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCC------CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCY------ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y------~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
+.++|..+.. +.+|.+++++.+++.+.....| ........+++...+.+.+..| .+. ..++++|+
T Consensus 33 ~~i~l~~~~~------~~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~--~~~-~~v~~~~G 103 (425)
T 3ecd_A 33 SQVELIASEN------IVSRAVLDAQGSVLTNKYAEGYPGKRYYGGCEFADEVEALAIERVKRLFN--AGH-ANVQPHSG 103 (425)
T ss_dssp HSEECCTTCC------CCCHHHHHHHTSGGGSSCTTC------------CCHHHHHHHHHHHHHHT--CSE-EECCCSSH
T ss_pred cceeeecccC------CCCHHHHHHHhhhhhcccccCCCcchhcCCChHHHHHHHHHHHHHHHHhC--CCC-ceeecCch
Confidence 4677766541 2389999999888753211122 2211111222222243433333 222 22458888
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCC---cHHHHhhcCC--EEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCC
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPY---YEGIAQRKQV--EVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPG 190 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~---~~~~~~~~g~--~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~ 190 (419)
++++..++.++.++||+|+++.|+|.+ +.......|. .+..+++++ +++.+|++.+++++. +++++|++++|+
T Consensus 104 s~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~~d~~~l~~~i~~~~~~~v~~~~~~ 182 (425)
T 3ecd_A 104 AQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSR-DTMLIDYDQVEALAQQHKPSLIIAGFSA 182 (425)
T ss_dssp HHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCT-TTSSCCHHHHHHHHHHHCCSEEEEECSC
T ss_pred HHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCc-ccCccCHHHHHHHHhhcCCcEEEEcccc
Confidence 999999999999999999999999987 2222223444 444555443 357899999999886 578999999999
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
||+ ..+ +++|.++|+++|+++|+||+|.. +.+.+.....+.. ..+++.|+||.+ +|+|+||++++++
T Consensus 183 ~~~--~~~---l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~~-----~di~~~s~sK~l--~g~~~g~~~~~~~ 250 (425)
T 3ecd_A 183 YPR--KLD---FARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVEH-----AHVVTSTTHKTL--RGPRGGFVLTNDE 250 (425)
T ss_dssp CCS--CCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGGT-----CSEEEEESSGGG--CCCSCEEEEESCH
T ss_pred CCC--cCC---HHHHHHHHHHcCCEEEEECcChHhhhhcccccCchhc-----CcEEEecCCccc--CCCCcEEEEeCCH
Confidence 964 444 78999999999999999999643 3344432222211 127889999985 6788999998752
Q ss_pred CCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEE
Q 014769 270 NGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMV 347 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~ 347 (419)
++.+.+...... ..+++.....++..++.....+++++..++++++++.+.+.|.+. ++.++..+.++++
T Consensus 251 -------~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~ 322 (425)
T 3ecd_A 251 -------EIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAG-GVDLVTGGTDNHL 322 (425)
T ss_dssp -------HHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSE
T ss_pred -------HHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhC-CCeeccCCCCceE
Confidence 455666554322 223444444444444443234567788889999999999999885 7763322356778
Q ss_pred EEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC------CCCeEEEEee------cCHHHHHHHHHHHHHHHHHH
Q 014769 348 TMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG------LKNWLRIAFC------AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~------~~~~~Ris~~------~~~~~l~~~l~~l~~~~~~~ 415 (419)
+|+.++... .+...+ .++++++||.+.++..++ ..+++|+++. .++++++++++.|++++++.
T Consensus 323 ~~~~~~~~~----~~~~~~-~~~l~~~gi~v~~~~~p~~~~~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~~ 397 (425)
T 3ecd_A 323 LLVDLRPKG----LKGAQV-EQALERAGITCNKNGIPFDPEKPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEAL 397 (425)
T ss_dssp EEEECGGGT----CCHHHH-HHHHHHTTEECEECCCTTCSSCTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEeCCCC----CCHHHH-HHHHHHcCCEecccccCCCCCCCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhcc
Confidence 888876421 134444 455578899999443221 2468999962 24899999999999998765
No 184
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.96 E-value=2.1e-28 Score=230.76 Aligned_cols=325 Identities=14% Similarity=0.146 Sum_probs=222.1
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHH
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEV 122 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~ 122 (419)
++++++.+.| +.++.+.+++.+.+... .|.+..+..++|+.+++++. . +++++++|+++++..
T Consensus 4 ~~~~l~~~~~------~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~~------~--~~~i~~~sgt~al~~ 66 (373)
T 3frk_A 4 SFASFKPMHD------EIEYEIKFKFEEIYKRN---WFILGDEDKKFEQEFADYCN------V--NYCIGCGNGLDALHL 66 (373)
T ss_dssp CSCCCHHHHH------HHHHHHHHHHHHHHHHT---CCSSSHHHHHHHHHHHHHHT------S--SEEEEESCHHHHHHH
T ss_pred cccCCCcccC------CCCHHHHHHHHHHHHCC---CccCCchHHHHHHHHHHHhC------C--CeEEEeCCHHHHHHH
Confidence 3455555542 34678888888887654 35666788999999999982 2 489999999999999
Q ss_pred HHHHh-cCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHH
Q 014769 123 ILSVL-ARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHH 201 (419)
Q Consensus 123 ~~~~l-~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~ 201 (419)
++.++ .++||+|+++.|+|.++...+...|.+++.++++++ ++.+|++++++++++++++|+ |+||||...+
T Consensus 67 ~l~~l~~~~gd~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~--- 139 (373)
T 3frk_A 67 ILKGYDIGFGDEVIVPSNTFIATALAVSYTGAKPIFVEPDIR-TYNIDPSLIESAITEKTKAII---AVHLYGQPAD--- 139 (373)
T ss_dssp HHHHTTCCTTCEEEEETTSCTHHHHHHHHHSCEEEEECEETT-TTEECGGGTGGGCCTTEEEEE---EECCTTCCCC---
T ss_pred HHHHcCCCCcCEEEECCCCcHHHHHHHHHcCCEEEEEecccc-ccCcCHHHHHHhcCCCCeEEE---EECCCcCccc---
Confidence 99999 899999999999999999999999999999988643 568999999999987777666 7789999988
Q ss_pred HHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCC--CcCCCCCceeEEEEeeCCCCccchhhH
Q 014769 202 LQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSIS--KRWLVPGWRFGWLVTNDPNGIFQKSGI 278 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~s--K~~~~~G~r~G~~~~~~~~~~~~~~~~ 278 (419)
+++|.++|+++|+++|+|++|+.+. +++.. ...+. .+++.||| |.++.+| +.|+++++++ ++
T Consensus 140 l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~---~~~~~----d~~~~S~~~~K~l~~~g-~gg~~~~~~~-------~~ 204 (373)
T 3frk_A 140 MDEIKRIAKKYNLKLIEDAAQAHGSLYKGMK---VGSLG----DAAGFSFYPAKNLGSLG-DGGAVVTNDK-------DL 204 (373)
T ss_dssp HHHHHHHHHHHTCEEEEECTTCTTCEETTEE---TTSSS----SEEEEECCTTSSSCCSS-SCEEEEESCH-------HH
T ss_pred HHHHHHHHHHcCCEEEEECCcccCCEECCEe---ccccc----cEEEEeCcCCCccCccc-eeEEEEeCCH-------HH
Confidence 8899999999999999999998633 22221 11111 27777877 8864434 3788887652 45
Q ss_pred HHHHHhhhcc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce
Q 014769 279 IDSIKDCLSI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 279 ~~~l~~~~~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
.+.++..... .+..+.+...+....+ +.+++..++.+++.+.+.+.|++++ +.....+.++
T Consensus 205 ~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~ 278 (373)
T 3frk_A 205 AEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKL-----KYLDKWNEERRKIAQKYIAGINNPN-VIIPVEADYA 278 (373)
T ss_dssp HHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHCCCTT-EECCCCCTTE
T ss_pred HHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccCc-eEeccCCCCC
Confidence 5555544321 1112322222221112 3356667777888888888888875 5422223323
Q ss_pred EEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----------C------------CCeEEEEee--cCHHH
Q 014769 346 MVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----------L------------KNWLRIAFC--AEPSA 400 (419)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----------~------------~~~~Ris~~--~~~~~ 400 (419)
...|..++... .+..++...| .++||.+.++.... . .+.+|+++. .++++
T Consensus 279 ~~~~~~~~~~~----~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lrl~~~~~~t~~d 353 (373)
T 3frk_A 279 KHVWYTFVIRS----EKRDELQKYL-NNNGIGTLIHYPIPIHLQQAYKDLGFKTGNFPIAEKIANEILSIPIWYGMKNEE 353 (373)
T ss_dssp ECCCSSEEEEE----SSHHHHHHHH-HHTTBCCBCSCSSCGGGSGGGGGGCCCTTSSHHHHHHHHHEEEECCCTTCCHHH
T ss_pred ceeeEEEEEEe----CCHHHHHHHH-HHCCCCcccCcCCccccChHHHhcCCCCCCCHHHHHHHhCEEEccCCCCCCHHH
Confidence 22221111100 1456666666 66799998765211 0 157999994 68999
Q ss_pred HHHHHHHHHHHHHHHhc
Q 014769 401 LKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 401 l~~~l~~l~~~~~~~~~ 417 (419)
++.+++.|+++..++-.
T Consensus 354 i~~~~~~l~~~~~~~~~ 370 (373)
T 3frk_A 354 IEYVIDKINAWKLEHHH 370 (373)
T ss_dssp HHHHHHHHHTCC-----
T ss_pred HHHHHHHHHHHhhhhcc
Confidence 99999999988876643
No 185
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.96 E-value=1.8e-28 Score=235.49 Aligned_cols=345 Identities=11% Similarity=0.032 Sum_probs=213.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQA 119 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~a 119 (419)
+|+.++||..|..... ....+|.+.+++.+++.......|+. ....++++.+++++ + ++++|++++|++++
T Consensus 51 ~g~~ylD~~~~~~~~~-lG~~~p~v~~A~~~~~~~~~~~~~~~-~~~~~la~~l~~~~----~---~~~~v~~~~sGsea 121 (429)
T 4e77_A 51 DGKAYIDYVGSWGPMI-LGHNHPAIRQAVIEAVERGLSFGAPT-EMEVKMAQLVTDLV----P---TMDMVRMVNSGTEA 121 (429)
T ss_dssp TCCEEEESSGGGTTCT-TCBTCHHHHHHHHHHHTTCSCCSSCC-HHHHHHHHHHHHHS----T---TCSEEEEESSHHHH
T ss_pred CCCEEEECCCchhccc-cCCCCHHHHHHHHHHHHhCcccCCCC-HHHHHHHHHHHhhC----C---CCCEEEEeCcHHHH
Confidence 5888999998865321 12257999999999987654333433 23345555555554 3 47899999999999
Q ss_pred HHHHHHHhc--CCCCeEEeeCCCCCCcHHHHh-hcCCEEEEEeccCCCCc------------ccChHHHHHhhcC--Ccc
Q 014769 120 VEVILSVLA--RPGANVLLPRPGWPYYEGIAQ-RKQVEVRHFDLLPERNW------------EVDLDAVEALADK--NTA 182 (419)
Q Consensus 120 l~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~-~~g~~~~~~~~~~~~~~------------~~~~~~l~~~~~~--~~~ 182 (419)
++.+++... .+++.|++.+++|++....+. ..+.....+......+. ..|++.|+++++. ...
T Consensus 122 ~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~ 201 (429)
T 4e77_A 122 TMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGVPTDFAKHTLTCTYNDLASVRQAFEQYPQEV 201 (429)
T ss_dssp HHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTSCGGGGTTEEEECTTCHHHHHHHHHHSTTTE
T ss_pred HHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCCCCccCCceeecCCCCHHHHHHHHHhcCCCE
Confidence 999998654 256899999999987654221 11111100000000000 0178889888864 345
Q ss_pred EEEEeCCCCccc-c-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCce
Q 014769 183 AMVIINPGNPCG-N-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWR 260 (419)
Q Consensus 183 ~v~i~~p~nptG-~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r 260 (419)
.+++++|+|++| . ..+.+++++|.++|+++|+++|+||+|.++ ..+.. .....++...++ .|+||.++ +|+|
T Consensus 202 ~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~-r~g~~-~~~~~~~~~pdi---~t~sK~~~-~G~~ 275 (429)
T 4e77_A 202 ACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGF-RVALA-GAQDYYHVIPDL---TCLGKIIG-GGMP 275 (429)
T ss_dssp EEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBT-TTBTT-CHHHHTTCCCSE---EEEEGGGG-TTSC
T ss_pred EEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCc-ccCcc-hHHHhcCCCCCe---eeeccccc-CCCC
Confidence 677788876654 3 345677999999999999999999999987 44432 122222222223 38899987 7999
Q ss_pred eEEEEeeCCCCccchhhHHHHHHhh----hccccCCchHHHHHHHHHHcccc-hHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 261 FGWLVTNDPNGIFQKSGIIDSIKDC----LSIYSDIPTFIQGAIPQILEKTK-EDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 261 ~G~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~a~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+||+++++ ++++.+... ...+++.+++++.++.++|+... .+..++..+.....++.+.+.+..+ +
T Consensus 276 ~G~~~~~~--------~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~-~ 346 (429)
T 4e77_A 276 VGAFGGRR--------EVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYETLTELTDSLATGLRHAAKEE-N 346 (429)
T ss_dssp CEEEEECH--------HHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred eEEEEECH--------HHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhC-C
Confidence 99999865 566666542 22345788888888888887432 2333333333333333444433334 2
Q ss_pred CCCCCCCCceEEEEeecCcccc---------cCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLL---------EDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLG 406 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~---------~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~ 406 (419)
+. ...+..|.++++.++.... .......++...++ ++||.+.|+.. ..+|+++..++++++++++
T Consensus 347 ~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~Gi~v~~~~~----~~~~~~~~~t~e~i~~~l~ 420 (429)
T 4e77_A 347 IP-LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLML-EEGVYLAPSAF----EAGFMSLAHSNEDIQKTVN 420 (429)
T ss_dssp CC-CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHH-HTTEECCSSTT----SCEECCTTCCHHHHHHHHH
T ss_pred Cc-eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHH-HCCeEEeecCC----CCEEEeccCCHHHHHHHHH
Confidence 32 2234557788888864200 00001256666664 56999998753 3567777789999999999
Q ss_pred HHHHHHHH
Q 014769 407 RMKAFCQR 414 (419)
Q Consensus 407 ~l~~~~~~ 414 (419)
+|++++++
T Consensus 421 ~l~~~l~~ 428 (429)
T 4e77_A 421 AARRCFAK 428 (429)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHh
Confidence 99998764
No 186
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.96 E-value=8.6e-28 Score=231.74 Aligned_cols=337 Identities=15% Similarity=0.052 Sum_probs=224.9
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCC---CCCHHHH--HHHH-HHHHhhCCCCCCCCcEEE-ccc
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATN---SGIPPAR--RAIA-DYLSRDLPYKLSADDVYV-TLG 115 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~---~g~~~lr--~~ia-~~l~~~~~~~~~~~~i~~-t~g 115 (419)
+.|+|..+. + +.+|.+++++.+.+.+....+|+.. .|...++ +.++ +++.+.+|. + .+.+ ++|
T Consensus 46 ~~i~l~~~~-----~-~~~~~v~~a~~~~~~~~~~~g~~~~~~~~g~~~~~~~e~~a~~~la~~~g~--~--~~~v~~~s 115 (447)
T 3h7f_A 46 DTLEMIASE-----N-FVPRAVLQAQGSVLTNKYAEGLPGRRYYGGCEHVDVVENLARDRAKALFGA--E--FANVQPHS 115 (447)
T ss_dssp HSEECCTTC-----C-CCCHHHHHHHTSGGGGCCCCEETTEESSSCCHHHHHHHHHHHHHHHHHHTC--S--EEECCCSS
T ss_pred CceeEecCC-----C-CCCHHHHHHHHHHhcCCccccCCcccccCccHHHHHHHHHHHHHHHHHcCC--C--ceEEEeCC
Confidence 568885442 1 3488999999887754322234331 2444444 4444 555554442 2 3444 788
Q ss_pred HHHHHHHHHHHhcCCCCeEEeeCCCCCCcH-H--H--HhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCC
Q 014769 116 CKQAVEVILSVLARPGANVLLPRPGWPYYE-G--I--AQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINP 189 (419)
Q Consensus 116 ~~~al~~~~~~l~~~gd~vlv~~p~~~~~~-~--~--~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p 189 (419)
+++++..++.+++++||+|++++|+|.++. . . ....+..+..++++++ ++.+|++++++++. .+++++++++|
T Consensus 116 Gs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~~i~~~~~ 194 (447)
T 3h7f_A 116 GAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPA-THLIDMDAVRATALEFRPKVIIAGWS 194 (447)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTT-TCSCCHHHHHHHHHHHCCSEEEEECS
T ss_pred HHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcc-cCCcCHHHHHHHHHhcCCeEEEEcCC
Confidence 899999999999999999999999987731 1 1 1223445666665433 46799999999885 36788888899
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+||++. + +++|.++|+++|+++|+|++|.. +.+.+....++ .. ..+++.|+||++ +|+|.||+++++
T Consensus 195 ~~~~~~--~---l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~---~~--~di~~~s~sK~l--~G~~gG~i~~~~ 262 (447)
T 3h7f_A 195 AYPRVL--D---FAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV---PH--ADVVSTTVHKTL--GGGRSGLIVGKQ 262 (447)
T ss_dssp SCCSCC--C---HHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST---TT--CSEEEEESSGGG--CCCSCEEEEECG
T ss_pred CCCCcc--C---HHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC---CC--CcEEEecCCcCC--CCCCeEEEEECH
Confidence 999876 3 89999999999999999999753 44444322222 11 127789999985 578999999865
Q ss_pred CCCccchhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----CCCCCCCCC
Q 014769 269 PNGIFQKSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PCISCPNKP 342 (419)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~~~~~~~p 342 (419)
++++.+..... ..++++...+.++..++.....+++++..+++.++++.+.+.|++. +++.++..+
T Consensus 263 --------~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~g~~~~~~~ 334 (447)
T 3h7f_A 263 --------QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPDVAKAGVSVVSGG 334 (447)
T ss_dssp --------GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHHHHHTTCEEGGGS
T ss_pred --------HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhccccCCCeEEecCC
Confidence 46666655432 2233444445555555554334567888889999999999999875 467644334
Q ss_pred CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cC--CCCCCCCeEEEEee------cCHHHHHHHHHHHHH
Q 014769 343 EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PG--IYVGLKNWLRIAFC------AEPSALKDGLGRMKA 410 (419)
Q Consensus 343 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g--~~~~~~~~~Ris~~------~~~~~l~~~l~~l~~ 410 (419)
..++++|+.+.... .+.+.+.++++++||.+. |+ ..+..++++|+++. .++++++++++.|.+
T Consensus 335 ~~~~~~~~~~~~~~-----~~~~~~~~~l~~~GI~v~~~~i~~~~~~p~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~ 409 (447)
T 3h7f_A 335 TDVHLVLVDLRDSP-----LDGQAAEDLLHEVGITVNRNAVPNDPRPPMVTSGLRIGTPALATRGFGDTEFTEVADIIAT 409 (447)
T ss_dssp CSSSEEEEECTTSS-----CCHHHHHHHHHHTTEECBC-------------CEEEEECHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCC-----CCHHHHHHHHHHCCeEEecccCCCCCCCCCCCCceeccCHHHhhCCCCHHHHHHHHHHHHH
Confidence 56778888775321 134455667788899998 66 23334688999982 468999999999999
Q ss_pred HHHHH
Q 014769 411 FCQRH 415 (419)
Q Consensus 411 ~~~~~ 415 (419)
++.+.
T Consensus 410 ~l~~~ 414 (447)
T 3h7f_A 410 ALATG 414 (447)
T ss_dssp HHHSG
T ss_pred HHhcc
Confidence 88654
No 187
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.96 E-value=7.3e-28 Score=229.06 Aligned_cols=327 Identities=11% Similarity=0.041 Sum_probs=212.6
Q ss_pred CCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC-CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE-cccHHH
Q 014769 41 PRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG-KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV-TLGCKQ 118 (419)
Q Consensus 41 ~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~-~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~-t~g~~~ 118 (419)
.+.+++|+.|. .++++.+++++.+..... ....+.+ ...++.+.+.+.+.+.+|.. ++++|++ |+|+++
T Consensus 38 ~~~~~~~~~~~------~~~~~~v~~a~~~~~~~~~~~~~~~~--~~~~~~~~~~~~la~~~g~~-~~~~i~~~t~g~t~ 108 (398)
T 2fyf_A 38 KPRDGRFGSGP------SKVRLEQLQTLTTTAAALFGTSHRQA--PVKNLVGRVRSGLAELFSLP-DGYEVILGNGGATA 108 (398)
T ss_dssp SCSSCBCCSSS------CCCCHHHHHGGGTTTTTTTTSCTTSH--HHHHHHHHHHHHHHHHTTCC-TTCEEEEEETCHHH
T ss_pred ccCCccccCCC------CCCCHHHHHHHhhcCCCccCcCcCCH--HHHHHHHHHHHHHHHHhCCC-CCceEEEeCCchhH
Confidence 34567777552 356788888876621010 1111222 11233344444444444433 3568998 999999
Q ss_pred HHHHHHHHhcCCCCeEEeeCCCCCC-cHHHHhhc--CCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcccc
Q 014769 119 AVEVILSVLARPGANVLLPRPGWPY-YEGIAQRK--QVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGN 195 (419)
Q Consensus 119 al~~~~~~l~~~gd~vlv~~p~~~~-~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~ 195 (419)
+++.++.+++++| .+.+..+.|.. ....+... |..++.++++ .++..+. .+++++++|++++|+||||.
T Consensus 109 al~~~~~~l~~~g-v~~v~~~~~~~~~~~~~~~~~~g~~~~~v~~~--~g~~~~~-----~i~~~~~~v~~~~~~nptG~ 180 (398)
T 2fyf_A 109 FWDAAAFGLIDKR-SLHLTYGEFSAKFASAVSKNPFVGEPIIITSD--PGSAPEP-----QTDPSVDVIAWAHNETSTGV 180 (398)
T ss_dssp HHHHHHHHTCSSC-EEEEECSHHHHHHHHHHHHCTTSCCCEEEECC--TTCCCCC-----CCCTTCSEEEEESEETTTTE
T ss_pred HHHHHHHHhcCCC-eEEEeCCHHHHHHHHHHHHhCCCCceEEEecC--CCCCCCc-----cccCCCCEEEEeCcCCCcce
Confidence 9999999998886 22233333321 12234555 7788888875 2333332 24567899999999999999
Q ss_pred CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccch
Q 014769 196 VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK 275 (419)
Q Consensus 196 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~ 275 (419)
++|.+++.++ +|+++|+|++|+.+... ..+. +..+++.|+||.++.+| ++||+++++
T Consensus 181 ~~~~~~i~~~------~~~~vivD~a~~~~~~~----~~~~-----~~di~~~s~sK~~~~~g-g~g~l~~~~------- 237 (398)
T 2fyf_A 181 AVAVRRPEGS------DDALVVIDATSGAGGLP----VDIA-----ETDAYYFAPQKNFASDG-GLWLAIMSP------- 237 (398)
T ss_dssp ECCCCCCTTC------C-CEEEEECTTTTTTSC----CCGG-----GCSEEEECTTSTTCSCS-SEEEEEECH-------
T ss_pred ecchHHhhhh------cCCeEEEEeccccCCcc----cCcc-----cCcEEEEecCcccCCCC-ceEEEEECH-------
Confidence 9995555443 79999999999874321 1121 12378889999988775 599999865
Q ss_pred hhHHHHHHhh----------------------hccccCCchHHHHHHHHHHcccchHH-HHHHHHHHHHHHHHHHHHhhc
Q 014769 276 SGIIDSIKDC----------------------LSIYSDIPTFIQGAIPQILEKTKEDF-FCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 276 ~~~~~~l~~~----------------------~~~~~~~~~~~~~a~~~~l~~~~~~~-~~~~~~~~~~~~~~l~~~l~~ 332 (419)
++++.++.. ....++++...+.++..+++...... +++..++++++++.+.+.|++
T Consensus 238 -~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~l~~~L~~ 316 (398)
T 2fyf_A 238 -AALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSSQRLYSWAQE 316 (398)
T ss_dssp -HHHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 455555321 01124566667777777776432222 788889999999999999998
Q ss_pred CCCCCCCC-CC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHH
Q 014769 333 IPCISCPN-KP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGR 407 (419)
Q Consensus 333 ~~~~~~~~-~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~ 407 (419)
++++.++. .| .+++++|++++.. .+..++...|.+ +||.+.+|......+++||+++ .++++++++++.
T Consensus 317 ~~g~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~L~~-~gI~v~~g~~~~~~~~iRis~~~~~t~e~i~~~~~~ 390 (398)
T 2fyf_A 317 RPYTTPFVTDPGLRSQVVGTIDFVDD-----VDAGTVAKILRA-NGIVDTEPYRKLGRNQLRVAMFPAVEPDDVSALTEC 390 (398)
T ss_dssp STTEEESCCSGGGBCSSEEEEEECTT-----SCHHHHHHHHHH-TTCBCCSCCTTTCSSEEEEECCTTSCHHHHHHHHHH
T ss_pred cCCceeccCChhhcCCcEEEEECCCC-----CCHHHHHHHHHH-CCcEEecCcccCCCCEEEEEecCCCCHHHHHHHHHH
Confidence 87777332 24 2455888888631 256778777754 5999988743223579999996 589999999999
Q ss_pred HHHHHHH
Q 014769 408 MKAFCQR 414 (419)
Q Consensus 408 l~~~~~~ 414 (419)
|++++++
T Consensus 391 l~~~l~~ 397 (398)
T 2fyf_A 391 VDWVVER 397 (398)
T ss_dssp HHHHHHT
T ss_pred HHHHHHh
Confidence 9998764
No 188
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.96 E-value=8.2e-28 Score=230.32 Aligned_cols=327 Identities=12% Similarity=0.036 Sum_probs=209.9
Q ss_pred ChHHHHHHHHHHHhCCCC------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCe
Q 014769 60 TAVEAEDAIVDAVRSGKF------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGAN 133 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~ 133 (419)
.+|.+.+++.+++..... ..|........+++...+.+.+..| .++++|++++| ++++..++.+++++||+
T Consensus 42 ~~~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~--~~~~~v~~~sG-s~a~~~a~~~~~~~gd~ 118 (420)
T 3gbx_A 42 TSPRVMQAQGSQLTNKYAEGYPGKRYYGGCEYVDVVEQLAIDRAKELFG--ADYANVQPHSG-SQANFAVYTALLQPGDT 118 (420)
T ss_dssp CCHHHHHHHTSGGGGCCC--------------CHHHHHHHHHHHHHHHT--CSEEECCCSSH-HHHHHHHHHHHCCTTCE
T ss_pred CCHHHHHHHHHHHhcccccCCCCccccCchHHHHHHHHHHHHHHHHHhC--CCCceeEecCc-HHHHHHHHHHhcCCCCE
Confidence 588999999888743221 1222333334444433344444333 45666766666 78999999999999999
Q ss_pred EEeeCCCCCCcH---HHHhhcC--CEEEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHH
Q 014769 134 VLLPRPGWPYYE---GIAQRKQ--VEVRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAE 207 (419)
Q Consensus 134 vlv~~p~~~~~~---~~~~~~g--~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~ 207 (419)
|+++.|+|..+. ......| .....++.+ .++.+|++.+++++++ +++++++++|+||+ ..+ +++|.+
T Consensus 119 v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~--~~~---l~~l~~ 191 (420)
T 3gbx_A 119 VLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGID--ESGKIDYDEMAKLAKEHKPKMIIGGFSAYSG--VVD---WAKMRE 191 (420)
T ss_dssp EEEEEEC------------CHHHHSEEEEEEEC--TTCSCCHHHHHHHHHHHCCSEEEECCTTCCS--CCC---HHHHHH
T ss_pred EEecchhhcceeccchhhhhcccceeEEeccCC--ccCCcCHHHHHHHHHhcCCeEEEEecCccCC--ccC---HHHHHH
Confidence 999999997632 2212223 344444443 4567999999999876 58899988999874 556 889999
Q ss_pred HHHhCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh
Q 014769 208 MARKLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (419)
Q Consensus 208 ~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~ 286 (419)
+|+++|+++|+||+|.... +.+.....+. ...+++.|+||.++ |.+.||+++++.- .++.+.++...
T Consensus 192 l~~~~~~~li~De~~~~~~~~~~~~~~~~~-----~~di~~~s~sK~~~--g~~gg~~~~~~~~-----~~~~~~~~~~~ 259 (420)
T 3gbx_A 192 IADSIGAYLFVDMAHVAGLIAAGVYPNPVP-----HAHVVTTTTHKTLA--GPRGGLILAKGGD-----EELYKKLNSAV 259 (420)
T ss_dssp HHHHTTCEEEEECTTTHHHHHTTSSCCSTT-----TSSEEEEESSGGGC--SCSCEEEEESSCC-----HHHHHHHHHHH
T ss_pred HHHHcCCEEEEECCcchhceecccCCcccc-----cCCEEEeecccCCC--CCCceEEEEcCCc-----HHHHHHhhhhc
Confidence 9999999999999986433 3332221211 13388999999964 5556999986410 13555555443
Q ss_pred cc--ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHH
Q 014769 287 SI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDI 364 (419)
Q Consensus 287 ~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~ 364 (419)
.. .++++...+.++..++.....+++++..++++++++.+.+.|.+. ++.++..+..++++|+.++... .+..
T Consensus 260 ~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~~~~~~~~----~~~~ 334 (420)
T 3gbx_A 260 FPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNR-GYKVVSGGTENHLFLLDLVDKN----LTGK 334 (420)
T ss_dssp C----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGT----CCHH
T ss_pred CCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhc-CCeeccCCCCCeEEEEEcCCCC----CCHH
Confidence 21 224444555555545544334667888899999999999999885 7764323356778888775421 1334
Q ss_pred HHHHHHHHhcCeEeec-------CCCCCCCCeEEEEee------cCHHHHHHHHHHHHHHHHHH
Q 014769 365 EFALKLAKEESVIVTP-------GIYVGLKNWLRIAFC------AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 365 ~~~~~ll~~~gv~v~~-------g~~~~~~~~~Ris~~------~~~~~l~~~l~~l~~~~~~~ 415 (419)
. +.++++++||.+.| +..|+ ...+||++. .++++++++++.|++++++.
T Consensus 335 ~-~~~~l~~~gi~v~~~~~~~~~~~~~~-~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 335 E-ADAALGRANITVNKNSVPNDPKSPFV-TSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp H-HHHHHHHTTEECEEECCTTCSSCTTT-CSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred H-HHHHHHHCCcEeccccCCCCccccCC-CcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 4 44555788999998 33333 356999983 34799999999999888653
No 189
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.96 E-value=9e-27 Score=227.29 Aligned_cols=365 Identities=13% Similarity=0.081 Sum_probs=248.7
Q ss_pred hHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCC
Q 014769 24 TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPY 103 (419)
Q Consensus 24 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~ 103 (419)
....+.+.+...+.- .+++.++++.-. ..++++.+.+++.+.+.... ..|....+..++++.+.+++.+.+|.
T Consensus 38 ~~~~~~~~~~~~i~l-~gnp~~~l~s~~-----t~~~~~~v~~~l~~~~~~~~-~~~~~~p~~~~le~~~~~~la~l~g~ 110 (502)
T 3hbx_A 38 PKEAAYQIINDELML-DGNPRLNLASFV-----TTWMEPECDKLIMSSINKNY-VDMDEYPVTTELQNRCVNMIAHLFNA 110 (502)
T ss_dssp CHHHHHHHHHHHGGG-SCCGGGBTTCCS-----CCCCCHHHHHHHHHTTTCBT-TCTTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHhcc-CCCCCceecccc-----CCCCCHHHHHHHHHHhccCC-CChhcChhHHHHHHHHHHHHHHHhCC
Confidence 344444444433322 245545544321 13457888888888775432 23444445678888888888888887
Q ss_pred CCCCCcEE---EcccHHHHHHHHHHHhcCC--------CC-----eEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcc
Q 014769 104 KLSADDVY---VTLGCKQAVEVILSVLARP--------GA-----NVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWE 167 (419)
Q Consensus 104 ~~~~~~i~---~t~g~~~al~~~~~~l~~~--------gd-----~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 167 (419)
+.++++++ +|+|+++++..++.++..+ |+ .|+++.++|..+...+...|++++.+++++ +++.
T Consensus 111 ~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~-~~~~ 189 (502)
T 3hbx_A 111 PLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWEKFARYFEVELKEVKLSE-GYYV 189 (502)
T ss_dssp CCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHHHHHHHTTCEEEEECCBT-TBCS
T ss_pred CcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHHHHHHHcCceeEEEecCC-CcCc
Confidence 65455554 5899999999998887654 76 899999999999999999999999998754 3478
Q ss_pred cChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC------CCeEEEccccccccc---CCCCCCCcccc
Q 014769 168 VDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL------RVMVVADEVYGHLTF---GSIPYTPMGLF 238 (419)
Q Consensus 168 ~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~------~~~li~De~~~~~~~---~~~~~~~~~~~ 238 (419)
+|++.+++++++++++|++++|+||||.+.+ +++|.++|+++ |+++++|++|+.+.. .+.....+.
T Consensus 190 ~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~---l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~~p~~~~~~~~~~~-- 264 (502)
T 3hbx_A 190 MDPQQAVDMVDENTICVAAILGSTLNGEFED---VKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFR-- 264 (502)
T ss_dssp CCHHHHHHHCCTTEEEEEEEBSCTTTCCBCC---HHHHHHHHHHHHHHHCCCCCEEEECTTGGGTHHHHCTTCCCSTT--
T ss_pred CCHHHHHHHHhhCCEEEEEecCCCCCCcccC---HHHHHHHHHHhhhccCCCCeEEEECCccchhhhhhCcccccccC--
Confidence 9999999999988999999999999999998 88889999998 999999999987542 222211121
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH---hhh-----c--cccCC---chHHHHHHHHHHc
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK---DCL-----S--IYSDI---PTFIQGAIPQILE 305 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~---~~~-----~--~~~~~---~~~~~~a~~~~l~ 305 (419)
...-.++..|.+|. +..+.++|+++++++..+. +.+. .+. . +.++. ....++++...+.
T Consensus 265 -~~~~D~v~~s~hK~-l~~p~g~G~~~~~~~~~l~------~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~~al~~lg 336 (502)
T 3hbx_A 265 -LPLVKSINVSGHKY-GLVYAGIGWVIWRNKEDLP------EELIFHINYLGADQPTFTLNFSKGSSQVIAQYYQLIRLG 336 (502)
T ss_dssp -STTEEEEEEETTTT-TCCCSSCEEEEESSGGGSC------GGGCEEECSSSSCEEECCSCCSCBSHHHHHHHHHHHHHH
T ss_pred -CCCceEEEECcccc-cCCCCCeEEEEEeCHHHhh------HHhccCcccccCCCCCccccCCchHHHHHHHHHHHHHHH
Confidence 11223667789997 6677889999887532111 1111 010 0 00111 2233333333332
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCC
Q 014769 306 KTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYV 384 (419)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~ 384 (419)
.+.+.++.++..++++++.+.|+++++++++ .+ ....++.++++... ..+..++...| .++||.+.....+
T Consensus 337 ---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~-~~~~~~~~v~f~~~~~~---~~~~~~l~~~L-~~~Gi~v~~~~~p 408 (502)
T 3hbx_A 337 ---HEGYRNVMENCRENMIVLREGLEKTERFNIV-SKDEGVPLVAFSLKDSS---CHTEFEISDML-RRYGWIVPAYTMP 408 (502)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHHHHHTTTCEEEC-SCSSSSSEEEEEESSCS---SCCHHHHHHHH-HTTTCBCCEEECC
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE-eCCCCceEEEEEecCCC---cCCHHHHHHHH-HhCCcEEeeccCC
Confidence 3567788888899999999999999778744 33 34456666775321 01345676666 6679987543322
Q ss_pred C---CCCeEEEEee--cCHHHHHHHHHHHHHHHHHHhc
Q 014769 385 G---LKNWLRIAFC--AEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 385 ~---~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
. ...++|++++ .++++++.+++.|+++++++.+
T Consensus 409 ~~~~~~~~lRisv~~~~t~edid~li~~L~~~l~~l~~ 446 (502)
T 3hbx_A 409 PNAQHITVLRVVIREDFSRTLAERLVIDIEKVMRELDE 446 (502)
T ss_dssp TTCTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHHHT
T ss_pred cccCCceEEEEEeCCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 2 2368999995 5889999999999999987654
No 190
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=99.96 E-value=4.8e-27 Score=223.87 Aligned_cols=290 Identities=16% Similarity=0.098 Sum_probs=199.4
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~ 159 (419)
+...+|++.+++++ + .+..++++++++|+..++.+++++||+|++++|+|.++.. .+...|.+++.++
T Consensus 82 p~~~~le~~lA~l~------g--~~~~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~ 153 (430)
T 3ri6_A 82 PTVEDLEQRLKNLT------G--ALGVLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVD 153 (430)
T ss_dssp HHHHHHHHHHHHHH------T--CSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHHH------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeC
Confidence 45678999999987 2 2346666677899999999999999999999999988766 6678899998887
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
.+ |++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+. .+ ..++
T Consensus 154 ~~-------d~~~l~~ai~~~t~~v~~e~p~NptG~~~d---l~~i~~la~~~g~~livD~a~~~~~~~----~~-~~~g 218 (430)
T 3ri6_A 154 VM-------DSLAVEHACDETTKLLFLETISNPQLQVAD---LEALSKVVHAKGIPLVVDTTMTPPYLL----EA-KRLG 218 (430)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHTTTCCEEEECTTSCTTTC----CG-GGGT
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccC----Ch-HHcC
Confidence 53 789999999989999999999999999998 889999999999999999999864321 11 1222
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEe-eCCCCcc------------chhhHHHHHHhhh--ccccCCchHHHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVT-NDPNGIF------------QKSGIIDSIKDCL--SIYSDIPTFIQGAIPQIL 304 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~-~~~~~~~------------~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l 304 (419)
..+++.|+||.++.+|..+|.+++ +...... ....++..++... ......++...+.+...+
T Consensus 219 ---~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l 295 (430)
T 3ri6_A 219 ---VDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPMAFLYKARKEVFQNLGPSLSPHNAYLQSLGL 295 (430)
T ss_dssp ---CSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHH
T ss_pred ---CEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHhhh
Confidence 248899999998877766555555 3322110 0011233333221 222333433333222222
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHH
Q 014769 305 EKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFAL 368 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~ 368 (419)
+.+..+.++..++...+.+.|++.|++..+..|. +|+.+|+.++.. .+...+++
T Consensus 296 -----~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~g~Gg~~lsf~l~~~-----~~~~~~~~ 365 (430)
T 3ri6_A 296 -----ETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQFRYAGSILTFELESK-----EASYRFMD 365 (430)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHCSSCCSEEEEECSSH-----HHHHHHHH
T ss_pred -----hhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCH-----HHHHHHHH
Confidence 3455666777888889999999888776454554 554888888621 12345555
Q ss_pred HHHHhcCeEeecCCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 369 KLAKEESVIVTPGIYVG-----------------------LKNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 369 ~ll~~~gv~v~~g~~~~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
.+ +..++.+++|..+. .+++||||++.+ +.+++++.|++++
T Consensus 366 ~l-~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E--~~~dl~~dl~~al 429 (430)
T 3ri6_A 366 AL-KLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIE--EIEDLKEDILQAL 429 (430)
T ss_dssp HC-SSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSS--CHHHHHHHHHHHH
T ss_pred hC-CcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccC--CHHHHHHHHHHhh
Confidence 44 55667777777554 147899999863 4445555555554
No 191
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=99.96 E-value=5.5e-27 Score=222.07 Aligned_cols=284 Identities=20% Similarity=0.141 Sum_probs=205.1
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~ 159 (419)
....++++.+++++ + .+++++++|++++++.++.++.++||+|+++.|+|++....+ ...|.++..++
T Consensus 66 ~~~~~l~~~la~~~------g--~~~~~~~~sGt~A~~~al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 137 (392)
T 3qhx_A 66 PTRTALEAALAAVE------D--AAFGRAFSSGMAAADCALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVA 137 (392)
T ss_dssp HHHHHHHHHHHHHT------T--CSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEEC
T ss_pred hHHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeC
Confidence 34568888888887 2 247899999999999999999999999999999998765554 66788988887
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
.+ |++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+... .++ .++
T Consensus 138 ~~-------d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~g~~li~D~~~~~~~~~----~~~-~~~ 202 (392)
T 3qhx_A 138 LA-------DLDAVRAAIRPTTRLIWVETPTNPLLSIAD---IAGIAQLGADSSAKVLVDNTFASPALQ----QPL-SLG 202 (392)
T ss_dssp TT-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGG-GGT
T ss_pred CC-------CHHHHHHhhCCCCeEEEEECCCCCCcEEec---HHHHHHHHHHcCCEEEEECCCcccccC----ChH-HhC
Confidence 52 889999999989999999999999999998 999999999999999999999854321 111 222
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
..+++.|+||.++.+| +++||++++++ ++.+.++.... .....++..+.++...++. +....+
T Consensus 203 ---~di~~~S~sK~lg~~g~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~~~~ 267 (392)
T 3qhx_A 203 ---ADVVLHSTTKYIGGHSDVVGGALVTNDE-------ELDQSFAFLQNGAGAVPGPFDAYLTMRGLKT-----LVLRMQ 267 (392)
T ss_dssp ---CSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred ---CcEEEEcCccccCCCCCceEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH-----HHHHHH
Confidence 3488999999988877 79999998642 46666665543 3456677777776666654 444556
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
+..++.+.+.+.|+++|.+..+..|. .|..+++.++... .....++..+ +..++.++.|
T Consensus 268 ~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~----~~~~~~~~~l-~~~~~~~s~G 342 (392)
T 3qhx_A 268 RHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGR----TAAEQLCAKT-NIFILAESLG 342 (392)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCH----HHHHHHHHHC-SSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcH----HHHHHHHHhC-CCceECCCCC
Confidence 66777778888888766543222221 2556778886310 1234444444 5667777777
Q ss_pred CCCC--------------------CCCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 382 IYVG--------------------LKNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 382 ~~~~--------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
+.+. .++.+|||++.. +.++.++.|.+++
T Consensus 343 ~~~sl~~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e--~~~~~i~~l~~al 391 (392)
T 3qhx_A 343 SVESLIEHPSAMTHASTAGSQLEVPDDLVRLSVGIE--DVADLLDDLKQAL 391 (392)
T ss_dssp CSSCEEECGGGTSCGGGBTTBCCCCTTEEEEECCSS--CHHHHHHHHHHHH
T ss_pred CCCceeeCcccccccccCHHHcCCCCCeEEEEeccC--CHHHHHHHHHHHh
Confidence 6532 146799999753 4445555555543
No 192
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=99.96 E-value=7.2e-27 Score=223.22 Aligned_cols=284 Identities=13% Similarity=0.109 Sum_probs=201.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~~ 160 (419)
...++|+.+++++ +.. +.|++++| +++++.++.+++++||+|+++.|+|.++.. .+...|.++..++.
T Consensus 115 ~~~~l~~~lA~l~------g~~-~~v~~~sG-~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~ 186 (445)
T 1qgn_A 115 TTVVLEEKISALE------GAE-STLLMASG-MCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDP 186 (445)
T ss_dssp HHHHHHHHHHHHH------TCS-EEEEESCH-HHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECS
T ss_pred HHHHHHHHHHHHh------CCC-cEEEeCCH-HHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCC
Confidence 4458999999987 332 45555555 599999999999999999999999987655 35667999888864
Q ss_pred cCCCCcccChHHHHHhhcCCc-cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 161 LPERNWEVDLDAVEALADKNT-AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~-~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
+ |++.+++++++++ ++|++++|+||||.+.+ +++|.++|+++|+++|+|++|...... .++ .++
T Consensus 187 ~-------d~~~l~~ai~~~tv~lV~le~p~NptG~v~d---l~~I~~la~~~g~~livD~a~~~~~~~----~~~-~~g 251 (445)
T 1qgn_A 187 A-------DVGALELALNQKKVNLFFTESPTNPFLRCVD---IELVSKLCHEKGALVCIDGTFATPLNQ----KAL-ALG 251 (445)
T ss_dssp S-------CHHHHHHHHHHSCEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTCTTTC----CTT-TTT
T ss_pred C-------CHHHHHHHhccCCCCEEEEeCCCCCCCcccC---HHHHHHHHHHcCCEEEEECCCcccccC----Ccc-ccC
Confidence 2 7899999998888 99999999999999998 889999999999999999999864321 111 222
Q ss_pred CCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhcc-ccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-YSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
..+++.|+||.++..| .++||+++++ ++++.+...... ....++...+++...++. +..+.+
T Consensus 252 ---~Div~~S~sK~~gg~gd~~~G~l~~~~--------~l~~~l~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~r~~ 315 (445)
T 1qgn_A 252 ---ADLVLHSATKFLGGHNDVLAGCISGPL--------KLVSEIRNLHHILGGALNPNAAYLIIRGMKT-----LHLRVQ 315 (445)
T ss_dssp ---CSEEEECTTTTTTCSSSCCCEEEEECH--------HHHHHHHHHHHHHCCCCCHHHHHHHHHHGGG-----HHHHHH
T ss_pred ---CEEEEECCcccccccccceEEEEEECH--------HHHHHHHHHHHHhCCCCCHHHHHHHHHhHHH-----HHHHHH
Confidence 3488999999987665 4799999864 567777655432 233455444444444443 444455
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCC----------------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC
Q 014769 318 TLRESAEICYDGVKEIPCISCPNKP----------------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG 381 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~~~~~~~~p----------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g 381 (419)
+..++++.+.+.|+++|++..+..| ..|.++++.++... .+...++..+ +..++.++.|
T Consensus 316 ~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~----~~~~~~l~~l-~~~~i~~s~G 390 (445)
T 1qgn_A 316 QQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDL----LTTAKFVDAL-KIPYIAPSFG 390 (445)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCH----HHHHHHHHHC-SSSEECSCCC
T ss_pred HHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCH----HHHHHHHHhC-CCceEeccCC
Confidence 6667788888889887765212233 13556677775310 0133444443 3346777777
Q ss_pred CCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHH
Q 014769 382 IYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 382 ~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~ 414 (419)
+.+ +. ++.+|+|++. |+++++++.|++++++
T Consensus 391 ~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~--Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 391 GCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGV--EDFDDLKADILQALDS 444 (445)
T ss_dssp SSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCS--SCHHHHHHHHHHHHHH
T ss_pred CCceeeecccccccccCCHHHHHhcCCCCCeEEEEecc--CCHHHHHHHHHHHHhh
Confidence 643 22 4799999994 5789999999988864
No 193
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.96 E-value=2e-27 Score=223.47 Aligned_cols=305 Identities=17% Similarity=0.191 Sum_probs=219.0
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEee
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLP 137 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~ 137 (419)
+.++++.+++.+.+... .|.+..+..++|+.+++++ + .+++++++|+++++..++.++ .++||+|+++
T Consensus 13 ~~~~~v~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~------~--~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~ 81 (367)
T 3nyt_A 13 RIKDKIDAGIQRVLRHG---QYILGPEVTELEDRLADFV------G--AKYCISCANGTDALQIVQMALGVGPGDEVITP 81 (367)
T ss_dssp HHHHHHHHHHHHHHHHC---CCSSCHHHHHHHHHHHHHH------T--CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred ccCHHHHHHHHHHHhcC---CccCChHHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHhCCCCcCEEEEC
Confidence 35678888888887654 3555567899999999998 2 248999999999999999999 8899999999
Q ss_pred CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
.|+|.++...+...|.+++.++++++ .+.+|++.+++++++++++|+ |+||||...+ +++|.++|+++|+++|
T Consensus 82 ~~~~~~~~~~~~~~G~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~---~~~i~~la~~~~~~li 154 (367)
T 3nyt_A 82 GFTYVATAETVALLGAKPVYVDIDPR-TYNLDPQLLEAAITPRTKAII---PVSLYGQCAD---FDAINAIASKYGIPVI 154 (367)
T ss_dssp SSSCTHHHHHHHHTTCEEEEECBCTT-TCSBCGGGTGGGCCTTEEEEC---CBCGGGCCCC---HHHHHHHHHHTTCCBE
T ss_pred CCccHHHHHHHHHcCCEEEEEecCCc-cCCcCHHHHHHhcCcCCcEEE---eeCCccChhh---HHHHHHHHHHcCCEEE
Confidence 99999999999999999999988653 468999999999987776665 8899998888 8899999999999999
Q ss_pred Eccccccc-ccCCCCCCCccccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhc-------
Q 014769 218 ADEVYGHL-TFGSIPYTPMGLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLS------- 287 (419)
Q Consensus 218 ~De~~~~~-~~~~~~~~~~~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~------- 287 (419)
+|++|+.+ .+.+... ..++ .+++.|| +|.++.+|. .|+++++++ ++.+.++....
T Consensus 155 ~D~a~~~g~~~~~~~~---~~~~----di~~~Sf~~~K~l~~~g~-gg~~~~~~~-------~l~~~~~~~~~~g~~~~~ 219 (367)
T 3nyt_A 155 EDAAQSFGASYKGKRS---CNLS----TVACTSFFPSAPLGCYGD-GGAIFTNDD-------ELATAIRQIARHGQDRRY 219 (367)
T ss_dssp EECTTTTTCEETTEET---TSSS----SEEEEECCTTSSSCCSSC-CEEEEESCH-------HHHHHHHHHTBTTEEETT
T ss_pred EECccccCCeECCeec---cCCC----CEEEEECCCCCcCCCcCc-eeEEEeCCH-------HHHHHHHHHHhcCCCcCc
Confidence 99999853 3333221 1222 2777887 899876576 888888652 46666665432
Q ss_pred ------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce----EEEEeecCcccc
Q 014769 288 ------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS----MVTMVKLNPWLL 357 (419)
Q Consensus 288 ------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g----~~~~~~~~~~~~ 357 (419)
.++..+.....++...++. +++..++.+++.+.+.+.|+++ ++.....+.++ ..+.+.++
T Consensus 220 ~~~~~g~~~~~~~~~aa~~~~~l~~-----~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~~~~~~~---- 289 (367)
T 3nyt_A 220 HHIRVGVNSRLDTLQAAILLPKLEI-----FEEEIALRQKVAAEYDLSLKQV-GIGTPFIEVNNISVYAQYTVRMD---- 289 (367)
T ss_dssp EECSCCCBCCCCHHHHHHHHHHHHT-----HHHHHHHHHHHHHHHHHHHHHT-TCCCCCCCTTEECCCSSEEEECS----
T ss_pred eeeccCcCCCccHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHhccC-CeeccCCCCCCceeeEEEEEEeC----
Confidence 1233455544444444432 4555666677778888888876 44422222222 12233332
Q ss_pred cCCCCHHHHHHHHHHhcCeEeecCCC--------CC-C-----------CCeEEEEee--cCHHHHHHHHHHHHHH
Q 014769 358 EDINDDIEFALKLAKEESVIVTPGIY--------VG-L-----------KNWLRIAFC--AEPSALKDGLGRMKAF 411 (419)
Q Consensus 358 ~~~~~~~~~~~~ll~~~gv~v~~g~~--------~~-~-----------~~~~Ris~~--~~~~~l~~~l~~l~~~ 411 (419)
+..++...| +++||.+.++.. |. . ...+|+++. .++++++.+++.|++.
T Consensus 290 ----~~~~l~~~L-~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~lp~~~~~t~~~i~~v~~~~~~~ 360 (367)
T 3nyt_A 290 ----NRESVQASL-KAAGVPTAVHYPIPLNKQPAVADEKAKLPVGDKAATQVMSLPMHPYLDTASIKIICAALTNL 360 (367)
T ss_dssp ----SHHHHHHHH-HHHTCCCBCSCSSCGGGSGGGCCTTCCCHHHHHHHHHEEEECCCTTCCHHHHHHHHHHHHC-
T ss_pred ----CHHHHHHHH-HHCCCceeccCCCccccChhhhccCCCChHHHHHHhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 355666665 667999887653 11 0 247899984 6899999999988764
No 194
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=99.96 E-value=7.4e-27 Score=216.47 Aligned_cols=277 Identities=14% Similarity=0.089 Sum_probs=192.5
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCC
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPE 163 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~ 163 (419)
++++.+++++ +.+ +.+++++ +++++..++.++.++||+|+++.|+|+++...+ ...|.++..++.
T Consensus 2 ~l~~~la~~~------g~~-~~i~~~s-G~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--- 70 (331)
T 1pff_A 2 ALEGKIAKLE------HAE-ACAATAS-GMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDM--- 70 (331)
T ss_dssp HHHHHHHHHH------TCS-EEEEESS-HHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECT---
T ss_pred hHHHHHHHHh------CCC-eEEEeCC-hHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCC---
Confidence 6899999998 333 4455555 589999999999999999999999999876554 457888888764
Q ss_pred CCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh-CCCeEEEcccccccccCCCCCCCccccCCCC
Q 014769 164 RNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK-LRVMVVADEVYGHLTFGSIPYTPMGLFGSIV 242 (419)
Q Consensus 164 ~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~~ 242 (419)
.|++.+++.+++++++|++++|+||||.+++ +++|.++|++ +|+++|+|++|+.+.+. .++ . .+
T Consensus 71 ----~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---~~~i~~~~~~~~~~~li~D~a~~~~~~~----~~~-~---~~ 135 (331)
T 1pff_A 71 ----AVPGNIEKHLKPNTRIVYFETPANPTLKVID---IEDAVKQARKQKDILVIVDNTFASPILT----NPL-D---LG 135 (331)
T ss_dssp ----TSTTHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTTSSSCEEEEECTTTHHHHC----CGG-G---GT
T ss_pred ----CCHHHHHHhhcCCCeEEEEECCCCCcCcccC---HHHHHHHHhhhcCCEEEEECCCcccccC----Chh-h---cC
Confidence 3788999999888899999999999999998 9999999999 99999999999875542 122 2 23
Q ss_pred cEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhcc--ccCCchHHHHHHHHHHcccchHHHHHHHHHH
Q 014769 243 PVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSI--YSDIPTFIQGAIPQILEKTKEDFFCKLIDTL 319 (419)
Q Consensus 243 ~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 319 (419)
..+++.|+||.++++|.| +||+++++ +++++.++..... +.+.++..+.++...++. .....+..
T Consensus 136 ~d~~~~s~~K~~~~~~~r~~G~~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~-----~~~~~~~~ 203 (331)
T 1pff_A 136 VDIVVHSATKYINGHTDVVAGLVCSRA-------DIIAKVKSQGIKDITGAIISPHDAWLITRGTLT-----LDMRVKRA 203 (331)
T ss_dssp CSEEEEETTTTTSSSSSCCCEEEEECH-------HHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHH-----HHHHHHHH
T ss_pred CcEEEEECccccCCCCCceEEEEEeCc-------HHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcch-----HHHHHHHH
Confidence 458999999999999999 79998864 1477777766543 345677777666555543 22223333
Q ss_pred HHHHHHHHHHhhcC--------------CCCCCCC--CCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC
Q 014769 320 RESAEICYDGVKEI--------------PCISCPN--KPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 320 ~~~~~~l~~~l~~~--------------~~~~~~~--~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
.++.+.+.+.+++. |++.++. ....+.++.+.++ +..++ .+++.++||.+.+.+.
T Consensus 204 ~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~l~~~gI~~~~~s~ 274 (331)
T 1pff_A 204 AENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQMKMFGSMIAFDVD--------GLEKA-KKVLDNCHVVSLAVSL 274 (331)
T ss_dssp HHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHHCSSCCSEEEEECS--------SHHHH-HHHHHTCSSSEECSSC
T ss_pred HHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEC--------CHHHH-HHHHHhCCCceeccCC
Confidence 34444444444322 1221100 0113445566664 23444 4556788997765421
Q ss_pred -------------------------CCC-CCeEEEEeec--CHHHHHHHHHHHHHH
Q 014769 384 -------------------------VGL-KNWLRIAFCA--EPSALKDGLGRMKAF 411 (419)
Q Consensus 384 -------------------------~~~-~~~~Ris~~~--~~~~l~~~l~~l~~~ 411 (419)
++. ++++|++++. ++++++.+++.|+++
T Consensus 275 g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i~~l~~~l~~~ 330 (331)
T 1pff_A 275 GGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDIIDDLKQALDLV 330 (331)
T ss_dssp CSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHTC
T ss_pred CCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHh
Confidence 122 5799999964 567888877777643
No 195
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=99.96 E-value=1.2e-26 Score=219.73 Aligned_cols=281 Identities=16% Similarity=0.111 Sum_probs=198.0
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~ 159 (419)
....++++.+++++ +. +++++++++++++..++.++.++||+|+++.|+|.++... ++..|.++..++
T Consensus 59 ~~~~~l~~~la~~~------g~--~~~i~~~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~ 130 (389)
T 3acz_A 59 PTVEQFEEMVCSIE------GA--AGSAAFGSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLID 130 (389)
T ss_dssp HHHHHHHHHHHHHH------TC--SEEEEESSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEEC
T ss_pred hHHHHHHHHHHHHh------CC--CeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEEC
Confidence 45678999999988 33 2666777788999999999999999999999999976554 577899988887
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
. .|++.+++++++++++|++++|+||||.+++ +++|.++|+++|+++|+|++|..+.+. .++. +
T Consensus 131 ~-------~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~---l~~i~~~~~~~~~~livD~~~~~~~~~----~~~~-~- 194 (389)
T 3acz_A 131 T-------SDVEKVKAAWKPNTKMVYLESPANPTCKVSD---IKGIAVVCHERGARLVVDATFTSPCFL----KPLE-L- 194 (389)
T ss_dssp T-------TCHHHHHHTCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECTTTCTTTC----CGGG-T-
T ss_pred C-------CCHHHHHHhcCCCCeEEEEECCCCCCCeecC---HHHHHHHHHHcCCEEEEECCCcccccc----Cccc-c-
Confidence 5 3789999999888999999999999999998 899999999999999999999876432 1221 2
Q ss_pred CCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLID 317 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~ 317 (419)
+..+++.|+||.++.+|.|+ ||++++++ ++++.++.... ...+.++..+.++...++. +....+
T Consensus 195 --~~di~~~S~sK~~~~~~~~~~G~v~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----l~~r~~ 260 (389)
T 3acz_A 195 --GADIALHSVSKYINGHGDVIGGVSSAKTA-------EDIATIKFYRKDAGSLMAPMDAFLCARGMKT-----LPIRMQ 260 (389)
T ss_dssp --TCSEEEEETTTTTTCSSCCCCEEEEESSH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HHHHHH
T ss_pred --CCeEEEECChhhccCCCCceeEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHcCccH-----HHHHHH
Confidence 34588999999999999998 99998641 36666665543 3344566666666666653 223334
Q ss_pred HHHHHHHHHHHHhhcCC--------CCCCC-----CC---CCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec-
Q 014769 318 TLRESAEICYDGVKEIP--------CISCP-----NK---PEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP- 380 (419)
Q Consensus 318 ~~~~~~~~l~~~l~~~~--------~~~~~-----~~---p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~- 380 (419)
+..++...+.+.|++++ ++... .. ...|.++.+.++ + .+...+++.+.|+.+.+
T Consensus 261 ~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~--------~-~~~~~~~l~~~~i~~~~~ 331 (389)
T 3acz_A 261 IHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMK--------S-FEAAKKLMEHLKVCTLAV 331 (389)
T ss_dssp HHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEES--------S-HHHHHHHHTTCSSSEEBS
T ss_pred HHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEEC--------C-HHHHHHHHHhCCCcEECc
Confidence 44455555555555432 22100 00 112445556664 2 23345666778988766
Q ss_pred --C------CCC----------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 381 --G------IYV----------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 381 --g------~~~----------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
| ..+ +. ++++|+|++.. +.++.++.|.++++
T Consensus 332 s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~--~~~~li~~l~~al~ 387 (389)
T 3acz_A 332 SLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIE--NVDDIIADLKQALE 387 (389)
T ss_dssp CCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHT
T ss_pred CCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccC--CHHHHHHHHHHHHh
Confidence 3 111 11 47999999864 56667777777664
No 196
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=99.96 E-value=3.7e-26 Score=218.03 Aligned_cols=309 Identities=18% Similarity=0.163 Sum_probs=211.4
Q ss_pred CCCChHHHHHHHHHHHhCCCCCCCCCC--CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769 57 CFRTAVEAEDAIVDAVRSGKFNCYATN--SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134 (419)
Q Consensus 57 ~~~~~~~v~~a~~~~~~~~~~~~Y~~~--~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~v 134 (419)
.++.++.+.+++. ... ...|+.. ....++++.+++++ + .+++++++|++++++.++.++.++||+|
T Consensus 31 ~~~~~~~~~~~~~---~~~-~~~y~~~~~~~~~~l~~~la~~~------g--~~~~~~~~~gt~a~~~al~~l~~~gd~v 98 (412)
T 2cb1_A 31 GFKTLEEGQERFA---TGE-GYVYARQKDPTAKALEERLKALE------G--ALEAVVLASGQAATFAALLALLRPGDEV 98 (412)
T ss_dssp CCSSHHHHHHHHH---HCC-SCSBTTTCCHHHHHHHHHHHHHH------T--CSEEEEESSHHHHHHHHHHTTCCTTCEE
T ss_pred ecCChHHHHHHhc---ccc-CcCcCCCCChHHHHHHHHHHHHh------C--CCcEEEECCHHHHHHHHHHHHhCCCCEE
Confidence 3566666666653 222 2356643 45678999999987 2 2489999999999999999999999999
Q ss_pred EeeCCCCCCcHHH----HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769 135 LLPRPGWPYYEGI----AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 135 lv~~p~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 210 (419)
+++.|+|.+.... +...|.+++.++. |++++++++++++++|++++|+||||.+.+ +++|.++|+
T Consensus 99 i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~--------~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~l~~ 167 (412)
T 2cb1_A 99 VAAKGLFGQTIGLFGQVLSLMGVTVRYVDP--------EPEAVREALSAKTRAVFVETVANPALLVPD---LEALATLAE 167 (412)
T ss_dssp EEETTCCHHHHHHHHHTTTTTTCEEEEECS--------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHH
T ss_pred EEeCCCchhHHHHHHHHHHHcCCEEEEECC--------CHHHHHHHhccCCeEEEEeCCCCCCccccc---HHHHHHHHH
Confidence 9999999865443 4457888888764 388999999888999999999999999998 999999999
Q ss_pred hCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCc------c-----------
Q 014769 211 KLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGI------F----------- 273 (419)
Q Consensus 211 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~------~----------- 273 (419)
++|+++|+|++|+.+.+.. .+. . .+..+++.|+||.++.+|.|+|++++.++... +
T Consensus 168 ~~~~~li~D~~~~~~~~~~---~~~-~---~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 240 (412)
T 2cb1_A 168 EAGVALVVDNTFGAAGALC---RPL-A---WGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPW 240 (412)
T ss_dssp HHTCEEEEECGGGTTTTSC---CGG-G---GTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------H
T ss_pred HcCCEEEEECCCccccccC---Ccc-c---cCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchh
Confidence 9999999999998752211 111 1 23458899999999899999999988763310 0
Q ss_pred ---chhhHHHHHHhhh-cc-ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC------
Q 014769 274 ---QKSGIIDSIKDCL-SI-YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP------ 342 (419)
Q Consensus 274 ---~~~~~~~~l~~~~-~~-~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p------ 342 (419)
...++.+.++... .. ....++.....+...++. +....++..++.+.+.+.|.+.+++..+..|
T Consensus 241 ~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~-----l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p 315 (412)
T 2cb1_A 241 EALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLET-----VALRVARMSETARFLAERLQGHPKVKALRYPGLPEDP 315 (412)
T ss_dssp HHHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGG-----HHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCT
T ss_pred hccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCch-----HHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCc
Confidence 0003445555433 21 122233333333333332 3455556677888889999888777633222
Q ss_pred ----------CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCC---------CCC----------------C-
Q 014769 343 ----------EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGI---------YVG----------------L- 386 (419)
Q Consensus 343 ----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~---------~~~----------------~- 386 (419)
..+.++.+.+ . +... +..++.+.||.+ .++ .+. .
T Consensus 316 ~~~~~~~~~~~~~~iv~~~~-~-------~~~~-~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~ 385 (412)
T 2cb1_A 316 AHRNARKYLASGGPILTLDL-G-------DLER-ASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVT 385 (412)
T ss_dssp THHHHHHHCSSSCSEEEEEC-S-------SHHH-HHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCC
T ss_pred cHHHHHHhCCCCceEEEEEe-C-------CHHH-HHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCC
Confidence 2344555656 2 2333 345557789998 663 121 0
Q ss_pred CCeEEEEeec--CHHHHHHHHHHHHH
Q 014769 387 KNWLRIAFCA--EPSALKDGLGRMKA 410 (419)
Q Consensus 387 ~~~~Ris~~~--~~~~l~~~l~~l~~ 410 (419)
++.+|+|++. ++++++.+++.|++
T Consensus 386 ~~~iR~s~g~~~~~~~i~~l~~al~~ 411 (412)
T 2cb1_A 386 PGLVRVSVGLEDPLDLLALFEEALEA 411 (412)
T ss_dssp TTEEEEECCSSCHHHHHHHHHHHHHC
T ss_pred CCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 5789999964 56777777776653
No 197
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.96 E-value=4.1e-26 Score=223.38 Aligned_cols=318 Identities=12% Similarity=0.030 Sum_probs=223.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC--------CC-----C-eEEeeCCCCCC
Q 014769 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR--------PG-----A-NVLLPRPGWPY 143 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~--------~g-----d-~vlv~~p~~~~ 143 (419)
..|....+..++++.+.+++.+.+|.+.+++++++|+|+++++..++.++.. +| + .|+++.++|+.
T Consensus 122 ~~~~~~~~~~~le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s 201 (504)
T 2okj_A 122 FTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYS 201 (504)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTH
T ss_pred CchhhChHHHHHHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHH
Confidence 3566555667788888888888777654478999999999999999988753 56 6 78899999999
Q ss_pred cHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 144 YEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 144 ~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
+...+...|. +++.++++ .++.+|+++|++++++ ++++|++++|+||||.+.+ +++|.++|+++|+
T Consensus 202 ~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~---l~~I~~la~~~g~ 276 (504)
T 2okj_A 202 IKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP---IQEIADICEKYNL 276 (504)
T ss_dssp HHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCC---HHHHHHHHHHHTC
T ss_pred HHHHHHHcCCCcccEEEEecC--CCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCC---HHHHHHHHHHcCC
Confidence 9888888877 78888864 3578999999998865 4788899999999999988 8999999999999
Q ss_pred eEEEcccccccccCCCCC-CCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHH-hhhccc--c
Q 014769 215 MVVADEVYGHLTFGSIPY-TPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIK-DCLSIY--S 290 (419)
Q Consensus 215 ~li~De~~~~~~~~~~~~-~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~-~~~~~~--~ 290 (419)
++++|++|+.+.+..... ..+..+. ...+++.+++|+++.| .++|++++++++ +.+... ....+. .
T Consensus 277 ~lhvD~a~~~~~~~~~~~~~~~~g~~--~~D~i~~~~hK~~~~p-~~~g~l~~~~~~-------~~~~~~~~~~~~l~~~ 346 (504)
T 2okj_A 277 WLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG-------ILQGCNQMCAGYLFQP 346 (504)
T ss_dssp EEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------HHHHHHCCCCSSSCCS
T ss_pred EEEEehhhhhHHHhCHhhHhhcCCcc--cCCEEEECchhhcCCC-cceEEEEEECHH-------HHHHHhcCCCccccCC
Confidence 999999999876543222 1222111 1126677899996655 689999997632 333211 111110 0
Q ss_pred -------------------CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCC--CCCceEEEE
Q 014769 291 -------------------DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPN--KPEGSMVTM 349 (419)
Q Consensus 291 -------------------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~--~p~~g~~~~ 349 (419)
....+.++++..++. .+.++++.++..++++++.+.|+++|+++++. .|..+++++
T Consensus 347 ~~~~~~~~~~~~~~~~~~rr~~~l~~~a~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~~~~~~~~~~p~~~~v~f 423 (504)
T 2okj_A 347 DKQYDVSYDTGDKAIQCGRHVDIFKFWLMWKAKG---TVGFENQINKCLELAEYLYAKIKNREEFEMVFNGEPEHTNVCF 423 (504)
T ss_dssp CCSSCGGGCCGGGSSCSSCBCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHTTCTTEEESSSSCCSSSCEEE
T ss_pred cccccCcCCcccCCCCCCCCccHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEecCCCCeEEEEE
Confidence 012445555555554 36688888999999999999999988888543 377777766
Q ss_pred eecCcccccCCC-----------CHHHHHHHHHHhcCeEeecCCCCCC-CCeEEEEee---cCHHHHHHHHHHHHHHHHH
Q 014769 350 VKLNPWLLEDIN-----------DDIEFALKLAKEESVIVTPGIYVGL-KNWLRIAFC---AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 350 ~~~~~~~~~~~~-----------~~~~~~~~ll~~~gv~v~~g~~~~~-~~~~Ris~~---~~~~~l~~~l~~l~~~~~~ 414 (419)
...+... .+.. ...++...|. +.|+.+..+..+.. .+++|++++ +++++++++++.|++++++
T Consensus 424 ~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~-~~G~~~~~~~~~~~~~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 501 (504)
T 2okj_A 424 WYIPQSL-RGVPDSPQRREKLHKVAPKIKALMM-ESGTTMVGYQPQGDKANFFRMVISNPAATQSDIDFLIEEIERLGQD 501 (504)
T ss_dssp EECCGGG-SSCCCCHHHHHHHTTHHHHHHHHHH-HHTSCEEEEEEETTEEEEEEECCCCTTCCHHHHHHHHHHHHHHHTC
T ss_pred EEeCccc-cccccchhhHHHHHHHHHHHHHHHH-hCCcEEEEeeEECCceEEEEEEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 5444310 0000 0235666664 45754333222322 368999996 6899999999999998765
Q ss_pred H
Q 014769 415 H 415 (419)
Q Consensus 415 ~ 415 (419)
+
T Consensus 502 ~ 502 (504)
T 2okj_A 502 L 502 (504)
T ss_dssp -
T ss_pred H
Confidence 4
No 198
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=99.96 E-value=9.4e-27 Score=221.08 Aligned_cols=286 Identities=14% Similarity=0.107 Sum_probs=193.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCC
Q 014769 78 NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQV 153 (419)
Q Consensus 78 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~ 153 (419)
..|++ .+..++|+++++++. .. +.|++++| ++++..++. ++++||+|++++|+|.+... .++..|.
T Consensus 62 ~r~~~-p~~~~l~~~la~~~g------~~-~~i~~~sG-~~ai~~~~~-l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~ 131 (403)
T 3cog_A 62 SRSGN-PTRNCLEKAVAALDG------AK-YCLAFASG-LAATVTITH-LLKAGDQIICMDDVYGGTNRYFRQVASEFGL 131 (403)
T ss_dssp ----C-HHHHHHHHHHHHHHT------CS-EEEEESCH-HHHHHHHHT-TSCTTCEEEEESSCCHHHHHHHHHTGGGGTC
T ss_pred cCCCC-chHHHHHHHHHHHhC------CC-cEEEECCH-HHHHHHHHH-HhCCCCEEEEeCCCcchHHHHHHHHHHHcCC
Confidence 34554 467899999999983 22 56666665 699999999 88999999999999987433 3466799
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC-CeEEEcccccccccCCCCC
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR-VMVVADEVYGHLTFGSIPY 232 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~-~~li~De~~~~~~~~~~~~ 232 (419)
++..++++ |++.+++++++++++|++++|+||||.+++ +++|.++|+++| +++|+|++|..+.+.
T Consensus 132 ~v~~v~~~-------d~~~l~~~i~~~t~~v~~~~p~nptG~~~~---l~~i~~la~~~g~~~livD~~~~~~~~~---- 197 (403)
T 3cog_A 132 KISFVDCS-------KIKLLEAAITPETKLVWIETPTNPTQKVID---IEGCAHIVHKHGDIILVVDNTFMSPYFQ---- 197 (403)
T ss_dssp EEEEECTT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHTSSSCCEEEEECTTTCTTTC----
T ss_pred EEEEECCC-------CHHHHHHhcCcCCeEEEEECCCCCCCeeeC---HHHHHHHHHHcCCCEEEEECCCcccccC----
Confidence 99888753 789999999888999999999999999998 999999999999 999999999986542
Q ss_pred CCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchH
Q 014769 233 TPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 233 ~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.++. + +..+++.|+||.++.+| .++||++++++ ++++.++.... .....++..+.++...++.
T Consensus 198 ~~~~-~---~~div~~S~sK~~~g~~~~~~G~v~~~~~-------~l~~~l~~~~~~~g~~~~~~~~~~~~~~l~~---- 262 (403)
T 3cog_A 198 RPLA-L---GADISMYSATKYMNGHSDVVMGLVSVNCE-------SLHNRLRFLQNSLGAVPSPIDCYLCNRGLKT---- 262 (403)
T ss_dssp CTTT-T---TCSEEEEETTTTTTCSSCCCCEEEEECCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT----
T ss_pred Cccc-c---CCeEEEEcChhhccCCCCCeEEEEEECcH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhhhhH----
Confidence 1221 2 34589999999988776 57999998642 56777765543 3445677777777777764
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC--------------CCCCCCCCC----CceEEEEeecCcccccCCCCHHHHHHHHHH
Q 014769 311 FFCKLIDTLRESAEICYDGVKEI--------------PCISCPNKP----EGSMVTMVKLNPWLLEDINDDIEFALKLAK 372 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~~~p----~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 372 (419)
+....++..++...+.+.|++. |++.+. .+ .++++.| .++. .. +...+++.
T Consensus 263 -l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~-~~~~~~~g~~~~~-~l~~-------~~-~~~~~~l~ 331 (403)
T 3cog_A 263 -LHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELV-KRQCTGCTGMVTF-YIKG-------TL-QHAEIFLK 331 (403)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHH-HHHCSCCCSEEEE-EESS-------CH-HHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHH-HhcCCCCceEEEE-EecC-------CH-HHHHHHHH
Confidence 2223333344444444444332 233211 11 2565555 5642 12 33455567
Q ss_pred hcCeEeec---CC----------CC------------CC-CCeEEEEeecCHHHHHHHHHHHHHHHHHH
Q 014769 373 EESVIVTP---GI----------YV------------GL-KNWLRIAFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 373 ~~gv~v~~---g~----------~~------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.+|.+.. |+ .+ +. ++++|||++. ++.++.++.|.+++++.
T Consensus 332 ~~~i~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~--e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 332 NLKLFTLAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGL--EDEEDLLEDLDQALKAA 398 (403)
T ss_dssp HCSSSEECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHHHHH
T ss_pred hCCcceEccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCC--CCHHHHHHHHHHHHHHh
Confidence 77885432 21 11 22 5799999976 23344555666665544
No 199
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.95 E-value=8.3e-26 Score=214.50 Aligned_cols=311 Identities=12% Similarity=0.107 Sum_probs=214.4
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCC--CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCeEEee
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSG--IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGANVLLP 137 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g--~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~vlv~ 137 (419)
++++.+++.+.+.. .|.++.| ..++|+++++++ + .++|++++|+++++..++.++ .++||+|+++
T Consensus 11 ~~~v~~a~~~~~~~----~~~~~~g~~~~~l~~~la~~~------~--~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~ 78 (394)
T 1o69_A 11 GGNELKYIEEVFKS----NYIAPLGEFVNRFEQSVKDYS------K--SENALALNSATAALHLALRVAGVKQDDIVLAS 78 (394)
T ss_dssp -CCHHHHHHHHHHH----TTTSCTTHHHHHHHHHHHHHH------C--CSEEEEESCHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred CHHHHHHHHHHHHc----CCccCCChHHHHHHHHHHHHh------C--CCcEEEeCCHHHHHHHHHHHcCCCCCCEEEEC
Confidence 46677888887764 3555567 899999999998 2 268999999999999999999 8999999999
Q ss_pred CCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 138 RPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 138 ~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
.|+|+++...+...|.+++.++++ .++.+|++.+++++++ ++++|++++ |||...+ +++|.++|+++|+
T Consensus 79 ~~~~~~~~~~~~~~g~~~~~v~~~--~~~~~d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~---l~~i~~l~~~~~~ 150 (394)
T 1o69_A 79 SFTFIASVAPICYLKAKPVFIDCD--ETYNIDVDLLKLAIKECEKKPKALILTH---LYGNAAK---MDEIVEICKENDI 150 (394)
T ss_dssp SSSCGGGTHHHHHTTCEEEEECBC--TTSSBCHHHHHHHHHHCSSCCCEEEEEC---GGGCCCC---HHHHHHHHHHTTC
T ss_pred CCccHHHHHHHHHcCCEEEEEEeC--CCCCcCHHHHHHHHhcccCCceEEEEEC---CCCChhh---HHHHHHHHHHcCC
Confidence 999999999999999999999876 4567999999998876 688888875 8998777 8999999999999
Q ss_pred eEEEccccc-ccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcccc-C-
Q 014769 215 MVVADEVYG-HLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYS-D- 291 (419)
Q Consensus 215 ~li~De~~~-~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~- 291 (419)
++|+|++|+ ++.+.+.... .+. . +.+.|+||..+++|.++||++++++ ++++.++....... .
T Consensus 151 ~li~Dea~~~g~~~~~~~~~---~~~--~--~~~~s~s~~K~l~~~~~G~~~~~~~-------~l~~~l~~~~~~~~~~~ 216 (394)
T 1o69_A 151 VLIEDAAEALGSFYKNKALG---TFG--E--FGVYSYNGNKIITTSGGGMLIGKNK-------EKIEKARFYSTQARENC 216 (394)
T ss_dssp EEEEECTTCTTCEETTEETT---SSS--S--EEEEECCTTSSSCCSSCEEEEESCH-------HHHHHHHHHTBTCCCSS
T ss_pred EEEEECcCcccceeCCcccc---ccc--C--cEEEEEeCCccCCCCCceEEEECCH-------HHHHHHHHHHHhccccC
Confidence 999999999 4555432211 111 1 4455664443456779999999632 56677665432110 0
Q ss_pred -------------CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC----ceE-EEEeecC
Q 014769 292 -------------IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE----GSM-VTMVKLN 353 (419)
Q Consensus 292 -------------~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~----~g~-~~~~~~~ 353 (419)
.+.....++...+ +++++..++++++++.+.+.|+++ +... .+. +++ ++++.++
T Consensus 217 ~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~--~~~~-~~~~~~~~~~~~~~i~~~ 288 (394)
T 1o69_A 217 LHYEHLDYGYNYRLSNVLGAIGVAQM-----EVLEQRVLKKREIYEWYKEFLGEY--FSFL-DELENSRSNRWLSTALIN 288 (394)
T ss_dssp SSCCCSSCCCBCBCCHHHHHHHHHHH-----TTHHHHHHHHHHHHHHHHHHHTTT--EECC-CCCTTEECCCSSEEEEES
T ss_pred ccccccccCcccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc--cccc-CCCCCCcceeEEEEEEec
Confidence 1112221211112 346667788889999999999875 4422 221 232 3556665
Q ss_pred ccc-------------ccC---CCCHHHHHHHHHHhcCeEeecCCCCC-----CC---------------CeEEEEe--e
Q 014769 354 PWL-------------LED---INDDIEFALKLAKEESVIVTPGIYVG-----LK---------------NWLRIAF--C 395 (419)
Q Consensus 354 ~~~-------------~~~---~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~---------------~~~Ris~--~ 395 (419)
... ..+ ..+..++...| .++||.+.+|..+. .. ..+|+.+ .
T Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (394)
T 1o69_A 289 FDKNELNACQKDINISQKNITLHPKISKLIEDL-KNKQIETRPLWKAMHTQEVFKGAKAYLNGNSELFFQKGICLPSGTA 367 (394)
T ss_dssp CCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHH-HHTTCCCBCCCCCGGGCGGGTTCEEEECSHHHHHHHHEEEECCCTT
T ss_pred chhhccccccccccccccccccccCHHHHHHHH-HHcCCcccccCCccccchhhhccCCCCChHHHHHhcCeEEccCCCC
Confidence 210 000 00245566666 66899999885320 01 2344444 2
Q ss_pred cCHHHHHHHHHHHHHHHHH
Q 014769 396 AEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 396 ~~~~~l~~~l~~l~~~~~~ 414 (419)
.++++++.+++.|++++..
T Consensus 368 ~t~edi~~~~~~l~~~~~~ 386 (394)
T 1o69_A 368 MSKDDVYEISKLILKSIKA 386 (394)
T ss_dssp CCHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHHhc
Confidence 6899999999999988754
No 200
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.95 E-value=8.6e-27 Score=220.70 Aligned_cols=283 Identities=17% Similarity=0.093 Sum_probs=193.3
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH----HHhhcCCEEEEEe
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG----IAQRKQVEVRHFD 159 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~----~~~~~g~~~~~~~ 159 (419)
.+..++|+++++++ +.+ +++++++++++++.++. ++++||+|+++.|+|++... .++..|.++..++
T Consensus 55 ~~~~~lr~~la~~~------g~~--~~i~~~sGt~a~~~al~-~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~ 125 (393)
T 1n8p_A 55 PNRENLERAVAALE------NAQ--YGLAFSSGSATTATILQ-SLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTN 125 (393)
T ss_dssp HHHHHHHHHHHHHT------TCS--EEEEESCHHHHHHHHHH-TSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEES
T ss_pred hhHHHHHHHHHHHh------CCC--cEEEECChHHHHHHHHH-HcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeC
Confidence 45679999999997 222 55555666999999999 88999999999999985433 4566788888887
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC----CCeEEEcccccccccCCCCCCCc
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL----RVMVVADEVYGHLTFGSIPYTPM 235 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~----~~~li~De~~~~~~~~~~~~~~~ 235 (419)
++ | +++++++++++++|++++|+||||.+++ +++|.++|+++ |+++|+|++|+.+.+. . .
T Consensus 126 ~~-------d-~~l~~~i~~~t~lv~~~~~~nptG~~~~---l~~i~~la~~~~~~~~~~livD~a~~~~~~~--~---~ 189 (393)
T 1n8p_A 126 DL-------L-NDLPQLIKENTKLVWIETPTNPTLKVTD---IQKVADLIKKHAAGQDVILVVDNTFLSPYIS--N---P 189 (393)
T ss_dssp SH-------H-HHHHHHSCSSEEEEEECSSCTTTCCCCC---HHHHHHHHHHHTTTTTCEEEEECTTTHHHHC--C---G
T ss_pred CC-------h-HHHHHhcccCceEEEEECCCCCcceecC---HHHHHHHHHHhCCCCCCEEEEeCCccccccC--C---H
Confidence 53 6 8899999888999999999999999998 89999999999 9999999999987653 1 1
Q ss_pred cccCCCCcEEEEecCCCcCCCCCcee-EEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHH
Q 014769 236 GLFGSIVPVITLGSISKRWLVPGWRF-GWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 236 ~~~~~~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
..+ +..+++.|+||.++.+|+|+ ||++++++ ++++.++.... .....++....++...++. +.
T Consensus 190 ~~~---~~di~~~S~sK~~g~~G~rigG~~~~~~~-------~~~~~l~~~~~~~g~~~~~~~~~~~~~~l~~-----~~ 254 (393)
T 1n8p_A 190 LNF---GADIVVHSATKYINGHSDVVLGVLATNNK-------PLYERLQFLQNAIGAIPSPFDAWLTHRGLKT-----LH 254 (393)
T ss_dssp GGG---TCSEEEEETTTTTTCSSCCCCEEEEESCH-------HHHHHHHHHHHHHCCCCCHHHHHHHHHHHTT-----HH
T ss_pred HHc---CCeEEEEECcccccCCCCceeEEEEeCCH-------HHHHHHHHHHHhcCCCCCHHHHHHHHhccch-----HH
Confidence 122 24588999999999999999 99988531 46666665533 2334455555555555543 44
Q ss_pred HHHHHHHHHHHHHHHHhhcCCC-CCCCCCC----------------C-c-eEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769 314 KLIDTLRESAEICYDGVKEIPC-ISCPNKP----------------E-G-SMVTMVKLNPWLLEDINDDIEFALKLAKEE 374 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~~-~~~~~~p----------------~-~-g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (419)
...++..++...+.+.|.+.+. +..+..| . . |.++++.++... .+...++..+ +..
T Consensus 255 ~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~----~~~~~~l~~l-~~~ 329 (393)
T 1n8p_A 255 LRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGA----EAASKFASST-RLF 329 (393)
T ss_dssp HHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCH----HHHHHHHHHC-SSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcH----HHHHHHHhhC-Ccc
Confidence 4455566667777777776543 2211111 1 2 556777776310 1233444433 334
Q ss_pred CeEeecCC----------CC------------CC-CCeEEEEeec--CHHHHHHHHHHHHHH
Q 014769 375 SVIVTPGI----------YV------------GL-KNWLRIAFCA--EPSALKDGLGRMKAF 411 (419)
Q Consensus 375 gv~v~~g~----------~~------------~~-~~~~Ris~~~--~~~~l~~~l~~l~~~ 411 (419)
++.++.|+ .+ +. ++.+|+|++. ++++++.+.+.|+++
T Consensus 330 ~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 330 TLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp EECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 55544442 11 11 4789999974 456666666666543
No 201
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.95 E-value=5.4e-26 Score=222.16 Aligned_cols=336 Identities=13% Similarity=0.076 Sum_probs=228.9
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh----c------
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL----A------ 128 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l----~------ 128 (419)
+.++.+.+++.....+.....|....+..++++.+.+++.+.+|.+ ..+++++|+|+++++..++.++ .
T Consensus 111 ~~~~~v~~~~~~~~~n~~~~~~~~~~~~~~le~~~~~~la~~~g~~-~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~ 189 (497)
T 2qma_A 111 PLMPAVAAEAMIAALNQSMDSWDQASSATYVEQKVVNWLCDKYDLS-EKADGIFTSGGTQSNQMGLMLARDWIADKLSGH 189 (497)
T ss_dssp CBHHHHHHHHHHHHHCCCTTCGGGCHHHHHHHHHHHHHHHHHTTCC-TTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CcHHHHHHHHHHHhhcccccchhhChHHHHHHHHHHHHHHHHhCCC-CCCCeEEcCCchHHHHHHHHHHHHHHHHhhccc
Confidence 5678887777665544444455554566788888888888877754 3478999999999999988873 2
Q ss_pred ---CC------CC-eEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcCC----cc--EEEEeCC
Q 014769 129 ---RP------GA-NVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN----TA--AMVIINP 189 (419)
Q Consensus 129 ---~~------gd-~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~----~~--~v~i~~p 189 (419)
.+ |+ .|+++.++|+++...+...|. +++.++++ .++.+|+++|+++++++ ++ +|+++.+
T Consensus 190 ~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~ 267 (497)
T 2qma_A 190 SIQKLGLPDYADKLRIVCSKKSHFTVQKSASWMGLGEKAVMTVDAN--ADGTMDITKLDEVIAQAKAEGLIPFAIVGTAG 267 (497)
T ss_dssp CHHHHCSCGGGGGEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred chhhcccccccCCeEEEECCCchHHHHHHHHHcCCCcccEEEEecC--CCCcCCHHHHHHHHHHHHHCCCcceEEEEcCC
Confidence 12 46 789999999998888888876 68888874 35789999999988653 33 7788899
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDP 269 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~ 269 (419)
+||||...+ +++|.++|+++|+++++|++|+.+.+.......+..+. ...+++.|+||+++.| .++|+++++++
T Consensus 268 ~~~tG~~~~---l~~I~~l~~~~~~~l~vD~a~~~~~~~~~~~~~~~gi~--~~D~i~~s~hK~l~~p-~~~G~l~~~~~ 341 (497)
T 2qma_A 268 TTDHGAIDD---LDFIADMAVKHDMWMHVDGAYGGALILSSHKSRLKGVE--RAHSISVDFHKLFYQT-ISCGALLVNDK 341 (497)
T ss_dssp CTTTCCBCC---HHHHHHHHHHHTCEEEEEETTGGGGGGSTTGGGGTTGG--GCSEEEEETTTTTCCC-SSCEEEEESCG
T ss_pred CCCCCCCCC---HHHHHHHHHHcCCEEEEehhhhHHHHhCcchHhhcCcc--cCCEEEEcchhccCCC-cceEEEEEeCH
Confidence 999999888 89999999999999999999998765432111111221 1226677899986655 69999998764
Q ss_pred CCccchhhHHHHHHhhhcc---cc--CC-------------chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh
Q 014769 270 NGIFQKSGIIDSIKDCLSI---YS--DI-------------PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK 331 (419)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~---~~--~~-------------~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~ 331 (419)
.. ++.+.....+ .. .+ ..+.++++...+ ..+.++++.+++.++++++.+.|+
T Consensus 342 ~~-------~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~al~~~~~l~~l---g~~g~~~~~~~~~~~a~~l~~~L~ 411 (497)
T 2qma_A 342 SN-------FKFLLHHADYLNREHDELPNLVDKSIATTKRFDALKVFMTMQNV---GPKALGDMYDHLLAQTLEVADMIR 411 (497)
T ss_dssp GG-------GGGGCC--------------------CCSCCCTHHHHHHHHHHT---CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH-------HHHhcCCchhcCCccccCCCccccCCCCCCchhHHHHHHHHHHh---CHHHHHHHHHHHHHHHHHHHHHHh
Confidence 21 1111100000 00 01 122233333333 356788888999999999999999
Q ss_pred cCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe---ecCHHHHHHHHHHH
Q 014769 332 EIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF---CAEPSALKDGLGRM 408 (419)
Q Consensus 332 ~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~---~~~~~~l~~~l~~l 408 (419)
++++++++..|..+ ++++++.........-..++...+ .+.|+.+.++..+....++|+++ .+++++++++++.|
T Consensus 412 ~~~~~~~~~~~~~~-~v~f~~~~~~~~~~~l~~~l~~~l-~~~G~~~~~~~~~~g~~~lRis~~~~~~t~edi~~~~~~l 489 (497)
T 2qma_A 412 TNDQFELLAEPSLS-TVLFRATHETADLDELNKALRLEA-LTRGIAVLGETIVDGKTALKFTILNPCLTTSDFESLLSKI 489 (497)
T ss_dssp TCTTEEECSCCSSS-EEEEEECCSSSCHHHHHHHHHHHH-HHHTSCBCEEEEETTEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred hCCCeEEEcCCCce-EEEEEEcCCccCHHHHHHHHHHHH-HhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHH
Confidence 98888754456655 555566431100000012444555 55698887655554457899998 36899999999999
Q ss_pred HHHHHHH
Q 014769 409 KAFCQRH 415 (419)
Q Consensus 409 ~~~~~~~ 415 (419)
+++++++
T Consensus 490 ~~~~~~~ 496 (497)
T 2qma_A 490 NMLAVEL 496 (497)
T ss_dssp HHHHHHC
T ss_pred HHHHHhh
Confidence 9988764
No 202
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.95 E-value=2.7e-26 Score=223.80 Aligned_cols=335 Identities=11% Similarity=0.053 Sum_probs=231.8
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-------CCcEEEcccHHHHHHHHHHHhcCC--
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-------ADDVYVTLGCKQAVEVILSVLARP-- 130 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-------~~~i~~t~g~~~al~~~~~~l~~~-- 130 (419)
++..+.+.+...+.. ....|....+..++++.+++++.+.+|.+.. ..++++|+|+|+++..++.++..+
T Consensus 86 ~~~~~~~~~~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~ 164 (486)
T 1js3_A 86 YPAMLADMLCGAIGC-IGFSWAASPACTELETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVV 164 (486)
T ss_dssp HHHHHHHHHHHHHCC-CCSSGGGCHHHHHHHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCc-CccccccChhHHHHHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHh
Confidence 344566677666643 3345666666789999999999998887642 357899999999999988776431
Q ss_pred -------CC--------e--EEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCcc------EEEEe
Q 014769 131 -------GA--------N--VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTA------AMVII 187 (419)
Q Consensus 131 -------gd--------~--vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~------~v~i~ 187 (419)
|| . |+++.++|+.+...++..|++++.++++ .++.+|+++|+++++++++ +|+++
T Consensus 165 ~~~~~~~gd~~~~~~~~~~~v~~s~~~h~s~~~~~~~~G~~v~~v~~d--~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~ 242 (486)
T 1js3_A 165 RRLQAASPGLTQGAVLEKLVAYASDQAHSSVERAGLIGGVKLKAIPSD--GKFAMRASALQEALERDKAAGLIPFFVVAT 242 (486)
T ss_dssp HHHHHHSTTCCHHHHHHHEEEEEETTCCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred hhhhccCccchhcccCCCEEEEECCCCcHHHHHHHHhCCCceEEeecC--CCCCCCHHHHHHHHHHHHhCCCCceEEEEe
Confidence 43 3 7889999999999999999999999874 4678999999999876553 78889
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
+|+||||.+-+ +++|.++|+++|+++++|++|+.+.+....... +..+.. .. .++.++||.++.| +++|++++
T Consensus 243 ~~~n~tG~~~~---l~~I~~la~~~~~~lhvD~a~g~~~~~~~~~~~~~~g~~~-ad-si~~~~hK~~~~p-~~~G~l~~ 316 (486)
T 1js3_A 243 LGTTSCCSFDN---LLEVGPICHEEDIWLHVDAAYAGSAFICPEFRHLLNGVEF-AD-SFNFNPHKWLLVN-FDCSAMWV 316 (486)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSTTTGGGGTTGGG-CS-EEEECHHHHSSCC-SSCEEEEE
T ss_pred CCCCCCCCCCC---HHHHHHHHHHcCCEEEEehhhHHHHHHCHHHHHHhcCccc-cC-eeEEchhhhcCCC-cceEEEEE
Confidence 99999999877 999999999999999999999976543221111 111111 12 4456889996655 88999999
Q ss_pred eCCCCccchhhHHHHHHh---hh-c-----------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHH
Q 014769 267 NDPNGIFQKSGIIDSIKD---CL-S-----------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEI 325 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~---~~-~-----------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~ 325 (419)
+++.. +.+.+.. +. . .+.....+.+.++...+. .+.++++.++..+++++
T Consensus 317 ~~~~~------l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~~~~~~~al~~~g---~~g~~~~~~~~~~~a~~ 387 (486)
T 1js3_A 317 KRRTD------LTGAFKLDPVYLKHSHQGSGLITDYRHWQLPLGRRFRSLKMWFVFRMYG---VKGLQAYIRKHVQLSHE 387 (486)
T ss_dssp SCHHH------HHGGGC------------CCSCCCGGGSSSCSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
T ss_pred eCHHH------HHHHhcCCchhhCCCcccccCCCCccccCCCCCCchhHHHHHHHHHHHh---HHHHHHHHHHHHHHHHH
Confidence 76310 1121110 00 0 000112344444444442 46788889999999999
Q ss_pred HHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHH
Q 014769 326 CYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALK 402 (419)
Q Consensus 326 l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~ 402 (419)
+.+.|+++|+++++..|..+++.| +++... ....++..+|.+ .|+.+.++..+....++|++++ +++++++
T Consensus 388 l~~~L~~~~~~~~~~~~~~~~v~f-~~~~~~----~~~~~l~~~L~~-~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~ 461 (486)
T 1js3_A 388 FEAFVLQDPRFEVCAEVTLGLVCF-RLKGSD----GLNEALLERINS-ARKIHLVPCRLRGQFVLRFAICSRKVESGHVR 461 (486)
T ss_dssp HHHHHHHCTTEEECSCCCSSEEEE-EESSCH----HHHHHHHHHHHH-HTSCBCEEEEETTEEEEEEECCCTTCCHHHHH
T ss_pred HHHHHhcCCCeEEeCCCceeEEEE-EecChH----HHHHHHHHHHHh-cCCEEEEEEEECCEEEEEEEeCCCCCCHHHHH
Confidence 999999988888554566665544 454210 014567777754 4654433333444679999983 4789999
Q ss_pred HHHHHHHHHHHHHhcc
Q 014769 403 DGLGRMKAFCQRHTKK 418 (419)
Q Consensus 403 ~~l~~l~~~~~~~~~~ 418 (419)
+++++|+++++++.++
T Consensus 462 ~~~~~l~~~~~~~~~~ 477 (486)
T 1js3_A 462 LAWEHIRGLAAELLAA 477 (486)
T ss_dssp HHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999877543
No 203
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.95 E-value=5.5e-26 Score=214.54 Aligned_cols=299 Identities=13% Similarity=0.146 Sum_probs=209.1
Q ss_pred HHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH--HHHhhcCC--EEEEEeccCC
Q 014769 88 PARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE--GIAQRKQV--EVRHFDLLPE 163 (419)
Q Consensus 88 ~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~--~~~~~~g~--~~~~~~~~~~ 163 (419)
++.+.+++.+.+..|. + +.|++|+|++++++.++..+ .+||+|++++++|++.. ..+...|. ++..++.+..
T Consensus 35 ~~~~~~~~~l~~~~~~--~-~~v~~~~sgt~a~~~~~~~~-~~gd~vi~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 110 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNA--E-AAVIIPGSGTYGMEAVARQL-TIDEDCLIIRNGWFSYRWTQILEKGKFAKSSTVLTAERT 110 (379)
T ss_dssp HHHHHHHHHHHHHHTC--S-EEEEEESCHHHHHHHHHHHH-CTTCEEEEEECSHHHHHHHHHHHHHCCSSEEEEEECEES
T ss_pred HHHHHHHHHHHHHhCC--C-CEEEEcCChhHHHHHHHHhC-CCCCeEEEEeCCchhHHHHHHHHHhCCCCceEEEecccc
Confidence 3444444444444443 3 68899999999999988665 58999999999997643 34455553 6677765431
Q ss_pred ------CC-cccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCc
Q 014769 164 ------RN-WEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPM 235 (419)
Q Consensus 164 ------~~-~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~ 235 (419)
.. ..+|++.++++++ +++++|++++++||||.++|.+++++|.++|+++|+++|+|++++ . + ....+
T Consensus 111 g~~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g---~-~~~~~ 185 (379)
T 3ke3_A 111 EDTEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-G---C-VWLDM 185 (379)
T ss_dssp SCCSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-T---T-CCCCH
T ss_pred ccccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-C---C-ccccc
Confidence 11 2479999999885 478999999999999999999999999999999999999999986 2 2 12222
Q ss_pred cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-----------------------ccccCC
Q 014769 236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-----------------------SIYSDI 292 (419)
Q Consensus 236 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-----------------------~~~~~~ 292 (419)
..++. .+++.|++|.++. +.++|++++++ ++++.+.... .+.+++
T Consensus 186 ~~~~~---d~~~~s~~K~l~~-~~g~g~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~ 253 (379)
T 3ke3_A 186 KELGI---DVLISAPQKGWSS-TPCAGLVMLSA--------AAIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATM 253 (379)
T ss_dssp HHHTC---SEEEECTTTTTCS-CCCEEEEEECH--------HHHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCC
T ss_pred cccCC---CEEEecchhhcCC-CCceEEEEECH--------HHHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCC
Confidence 22333 3778899998643 34589998865 4555444210 012366
Q ss_pred chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHH
Q 014769 293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKL 370 (419)
Q Consensus 293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~l 370 (419)
+...+.++.++++......+++..++++++++++++.|+++ ++..+..+. .+....+..+. ....+. ..
T Consensus 254 ~~~~~~a~~aal~~~~~~g~~~~~~~~~~l~~~l~~~l~~~-g~~~~~~~~~~~~~i~~~~~~~-------~~~~~~-~~ 324 (379)
T 3ke3_A 254 PTDSLRQFRDAILEAKEIGFDILRDAQWELGNRVRKVLTDK-GIESVAAEGFEAPGVVVSYTER-------DDMHKG-SA 324 (379)
T ss_dssp CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT-TCCBSBCTTCBCSSEEEEECSC-------HHHHSS-HH
T ss_pred CHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHc-CCEecCCccccCceEEEEccCC-------cchHHH-HH
Confidence 77777777777765433447788889999999999999987 776442221 22233333321 112223 44
Q ss_pred HHhcCeEeecCCCCCC-----CCeEEEEee--cCHHHHHHHHHHHHHHHHHHh
Q 014769 371 AKEESVIVTPGIYVGL-----KNWLRIAFC--AEPSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 371 l~~~gv~v~~g~~~~~-----~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~~ 416 (419)
|.++||.+.+|..+.. .+.+|+++. .++++|+++++.|+++++++.
T Consensus 325 L~~~Gi~v~~g~~~~~~~~~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~~ 377 (379)
T 3ke3_A 325 FAEAGLQIAAGVPLKVGEPDNFKTFRLGLFGLDKLTDIDGTVERFEKALDEVL 377 (379)
T ss_dssp HHHTTCCCEECCCCSSCCCTTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHHH
T ss_pred HHHCCeEEeCCccccccccCcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHhc
Confidence 5778999999986543 679999994 588999999999999998875
No 204
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.95 E-value=6.6e-25 Score=214.48 Aligned_cols=333 Identities=11% Similarity=0.021 Sum_probs=230.0
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC------------
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR------------ 129 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~------------ 129 (419)
..+.+.+...+.. ....|....+..++++.+++|+.+.+|.+.+++.+++|+|+++++..++.++..
T Consensus 110 ~~~~e~l~~~~~~-~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~ 188 (511)
T 3vp6_A 110 GLAGEWLTSTANT-NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMA 188 (511)
T ss_dssp HHHHHHHHHHHCC-CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGG
T ss_pred HHHHHHHHHHhcc-CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcc
Confidence 3344555555543 344787777889999999999999888776678999999999999998887754
Q ss_pred --CCCeEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCCCCccccCCC
Q 014769 130 --PGANVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 130 --~gd~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p~nptG~~~~ 198 (419)
+++.|+++.++|+++...+...|. .++.++++ .++.+|+++|+++++++ +++|+++.|+||||.+-+
T Consensus 189 ~~~~~~v~~s~~~H~s~~~~~~~~g~g~~~~~~v~~d--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~ 266 (511)
T 3vp6_A 189 AVPKLVLFTSEQSHYSIKKAGAALGFGTDNVILIKCN--ERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDP 266 (511)
T ss_dssp GSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCC
T ss_pred cCCCeEEEECCCchHHHHHHHHHcCCCCCcEEEeecC--CCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCccccc
Confidence 467899999999999999999998 78888875 35789999999998754 778899999999999977
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~ 277 (419)
+++|+++|+++|+++++|++|+.......... .+.... .-.+++.+++|+++.| ..+|+++++++.
T Consensus 267 ---l~~I~~ia~~~~~~lhvD~a~~~~~~~~~~~~~~~~g~~--~aDsv~~~~hK~l~~p-~g~g~l~~~~~~------- 333 (511)
T 3vp6_A 267 ---IQEIADICEKYNLWLHVDAAWGGGLLMSRKHRHKLNGIE--RANSVTWNPHKMMGVL-LQCSAILVKEKG------- 333 (511)
T ss_dssp ---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESSTT-------
T ss_pred ---HHHHHHHHHHcCCEEEEEccchhhHhhChhhhhhccCCc--cCCEEEECcccccCCC-cCeEEEEEeCHH-------
Confidence 99999999999999999999998654322111 111111 1125667999996655 678999887642
Q ss_pred HHHHHHhh-hccc-------------------c--CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 278 IIDSIKDC-LSIY-------------------S--DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 278 ~~~~l~~~-~~~~-------------------~--~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+....... ..+. . ........++..++ ..++++++.++..++.+++.+.|+++|+
T Consensus 334 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~r~~~al~~~~al~~~---g~~gl~~~~~~~~~~a~~l~~~L~~~pg 410 (511)
T 3vp6_A 334 ILQGCNQMHASYLFQQDKHYDVSYDTGDKAIQCGRHVDIFKFWLMWKAK---GTVGFENQINKCLELAEYLYAKIKNREE 410 (511)
T ss_dssp HHHHHHCCCCTTTCCSSCSSCGGGCCGGGSSCSSCCCCHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSCTT
T ss_pred HHHHHhccCCccccCcccccccccCccCCCCCCCCchHHHHHHHHHHHH---hHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 33332111 1100 0 01223333333333 3578899999999999999999999889
Q ss_pred CCCCC--CCCceEEEEeecCcccccCCC-C----------HHHHHHHHHHhcCeEeecCCC-CCCCCeEEEEee---cCH
Q 014769 336 ISCPN--KPEGSMVTMVKLNPWLLEDIN-D----------DIEFALKLAKEESVIVTPGIY-VGLKNWLRIAFC---AEP 398 (419)
Q Consensus 336 ~~~~~--~p~~g~~~~~~~~~~~~~~~~-~----------~~~~~~~ll~~~gv~v~~g~~-~~~~~~~Ris~~---~~~ 398 (419)
++++. .|..+.+.|.-.|.. ..+.. + ..++..+|.+ +|+.+..... .+..+++|++++ ++.
T Consensus 411 ~~l~~~~~p~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~L~~-~G~~~~~~~~~~~~~~~lRi~~~~~~~t~ 488 (511)
T 3vp6_A 411 FEMVFNGEPEHTNVCFWYIPQS-LRGVPDSPQRREKLHKVAPKIKALMME-SGTTMVGYQPQGDKANFFRMVISNPAATQ 488 (511)
T ss_dssp EEESSSSCCSSSCEEEEECCGG-GSSCCCCHHHHHHHHHHHHHHHHHHHH-HTSCEEEEEEETTEEEEEEECCCCTTCCH
T ss_pred EEEEecCCCCeEEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHHHh-cCCEEEEEEEeCCceEEEEEEecCCCCCH
Confidence 88554 366666554333321 11100 0 1245566644 5754433111 112357999983 478
Q ss_pred HHHHHHHHHHHHHHHHH
Q 014769 399 SALKDGLGRMKAFCQRH 415 (419)
Q Consensus 399 ~~l~~~l~~l~~~~~~~ 415 (419)
++|+.+++.|+++-+.+
T Consensus 489 ~di~~ll~~i~~~~~~~ 505 (511)
T 3vp6_A 489 SDIDFLIEEIERLGQDL 505 (511)
T ss_dssp HHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 99999999999877654
No 205
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=99.95 E-value=8.1e-26 Score=214.69 Aligned_cols=212 Identities=14% Similarity=0.105 Sum_probs=156.0
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH----HhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI----AQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~----~~~~g~~~~~~~~ 160 (419)
...++++.+|+++ + .+++++++|+++|++.++.+++++||+|+++.+.|.+.... ++..|+++..++.
T Consensus 83 ~~~~le~~lA~l~------g--~~~~i~~ssGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~ 154 (415)
T 2fq6_A 83 THFSLQQAMCELE------G--GAGCVLFPCGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDP 154 (415)
T ss_dssp HHHHHHHHHHHHH------T--CSEEEEESSHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECT
T ss_pred hHHHHHHHHHHHh------C--CCeEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECC
Confidence 4567999999987 2 24677778999999999999999999999999999876543 3557888888764
Q ss_pred cCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCcccc
Q 014769 161 LPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLF 238 (419)
Q Consensus 161 ~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~ 238 (419)
+ |++++++++++++++|++++|+||||.+.+ +++|.++|++ +|+++|+|++|+..... .++ .+
T Consensus 155 ~-------d~~~le~ai~~~tklV~~e~~~NptG~v~d---l~~I~~la~~~~~g~~livD~a~a~~~~~----~p~-~~ 219 (415)
T 2fq6_A 155 L-------IGADIVKHLQPNTKIVFLESPGSITMEVHD---VPAIVAAVRSVVPDAIIMIDNTWAAGVLF----KAL-DF 219 (415)
T ss_dssp T-------CGGGGGGGCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHCTTCEEEEECTTTTTTSS----CGG-GG
T ss_pred C-------CHHHHHHhhccCCcEEEEECCCCCCCEeec---HHHHHHHHHhhcCCCEEEEECCCcccccC----Ccc-cc
Confidence 2 788999999888999999999999999998 8999999999 99999999999864321 122 22
Q ss_pred CCCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 239 GSIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
+ ..+++.|+||.++.+|.+ .||+++++ ++++.++.... .....++...+++...+ +.+....
T Consensus 220 g---~Div~~S~sK~lg~~g~~~~G~l~~~~--------~~~~~l~~~~~~~G~~~~~~~a~~~~~~l-----~~l~~r~ 283 (415)
T 2fq6_A 220 G---IDVSIQAATKYLVGHSDAMIGTAVCNA--------RCWEQLRENAYLMGQMVDADTAYITSRGL-----RTLGVRL 283 (415)
T ss_dssp T---CSEEEEETTTTTTCSSSCCCEEEEECT--------TTHHHHHHHHHHTTCCCCHHHHHHHHHHH-----HHHHHHH
T ss_pred C---CeEEEEeCccccCCCCCceEEEEEeCH--------HHHHHHHHHHHhcCCCCCHHHHHHHHhhh-----hHHHHHH
Confidence 2 348899999999888865 68988765 24455554432 22233444333333333 2345555
Q ss_pred HHHHHHHHHHHHHhhcCCC
Q 014769 317 DTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~ 335 (419)
++..++...+.+.|++.|.
T Consensus 284 ~~~~~n~~~l~~~L~~~~~ 302 (415)
T 2fq6_A 284 RQHHESSLKVAEWLAEHPQ 302 (415)
T ss_dssp HHHHHHHHHHHHHHHTCTT
T ss_pred HHHHHHHHHHHHHHHcCCC
Confidence 6667777778888876543
No 206
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.95 E-value=1.7e-25 Score=210.57 Aligned_cols=315 Identities=13% Similarity=0.107 Sum_probs=216.1
Q ss_pred CCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHH-HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-cCCCCe
Q 014769 56 PCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAI-ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-ARPGAN 133 (419)
Q Consensus 56 ~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~i-a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-~~~gd~ 133 (419)
|.++.++.+.+++.+.+..+.+..|++ ...++++++ ++++ + ..+++++++|+++++..++.++ .++||+
T Consensus 10 p~~~~~~~i~~a~~~~~~~~~~~~~~~--~~~~l~~~~~a~~~------g-~~~~~v~~~sgt~al~~al~~l~~~~Gd~ 80 (377)
T 3ju7_A 10 ASTVPVIEYLDELKEIDASHIYTNYGP--INQRFEQTIMSGFF------Q-NRGAVTTVANATLGLMAAIQLKKRKKGKY 80 (377)
T ss_dssp CCCCCGGGGHHHHHHHHHHTCCSSSCH--HHHHHHHHHHHHTS------T-TCSEEEEESCHHHHHHHHHHHHSCTTCCE
T ss_pred CCCCCcHHHHHHHHHHHHcCCcccCCH--HHHHHHHHHHHHHh------C-CCCeEEEeCCHHHHHHHHHHHcCCCCcCE
Confidence 457788999999999887765433443 468999999 9987 2 2567899999999999999998 899999
Q ss_pred EEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh-cCC--ccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769 134 VLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA-DKN--TAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 134 vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~-~~~--~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 210 (419)
|+++.|+|..+...+...|.+++.+++++ +++.+|++++++++ +++ +++|+ |+||+|...+ +++|.++|+
T Consensus 81 Vi~~~~~~~~~~~~~~~~G~~~~~v~~~~-~~~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~---~~~i~~la~ 153 (377)
T 3ju7_A 81 ALMPSFTFPATPLAAIWCGLEPYFIDISI-DDWYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMN---LEEYEELEK 153 (377)
T ss_dssp EEEESSSCTHHHHHHHHTTCEEEEECBCT-TTCSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCC---CHHHHHHHH
T ss_pred EEECCCCcHHHHHHHHHcCCEEEEEecCC-ccCCcCHHHHHHHHhcCCCCceEEE---EECCCCCccC---HHHHHHHHh
Confidence 99999999999999999999999999864 46789999999988 555 66655 7789999988 788899999
Q ss_pred hCCCeEEEccccccccc-CCCCCCCc-cccCCCCcEEEEecC--CCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh
Q 014769 211 KLRVMVVADEVYGHLTF-GSIPYTPM-GLFGSIVPVITLGSI--SKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL 286 (419)
Q Consensus 211 ~~~~~li~De~~~~~~~-~~~~~~~~-~~~~~~~~~i~~~s~--sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~ 286 (419)
+|+++|+|++|+.... .+. .+ ..+. .+.+.|| +|.++. | +.|++++++ +++.+.++...
T Consensus 154 -~~~~vi~D~a~a~g~~~~~~---~~g~~~~----d~~~~S~~~~K~l~~-g-~gG~~~~~~-------~~l~~~~~~~~ 216 (377)
T 3ju7_A 154 -KGVPVVVDAAPGFGLMNGGM---HYGQDFS----GMIIYSFHATKPFGI-G-EGGLIYSKN-------EEDIQRIKRMG 216 (377)
T ss_dssp -TTCCBEEECTTCTTCEETTE---ETTTTCS----SEEEEECBTTSSSCC-B-SCEEEEESC-------HHHHHHHHHHT
T ss_pred -cCCEEEEECCCccCCeECCE---eccCCCC----cEEEEECCCCCcCCC-C-CcEEEEECC-------HHHHHHHHHHH
Confidence 9999999999986432 211 11 1111 1445565 588654 4 678888765 25666666553
Q ss_pred cc-------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce-----EEE
Q 014769 287 SI-------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS-----MVT 348 (419)
Q Consensus 287 ~~-------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g-----~~~ 348 (419)
.. ....+.+....+...+ +.++...++.+++++.+.+.|++++++.....+..+ .|+
T Consensus 217 ~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l-----~~l~~~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~ 291 (377)
T 3ju7_A 217 NFGFDTNRECTMMGFNCKMSEYAAAIGIATM-----KKWDDKLKERTRISEWYKQLLQSNGLMKKGWQLQKTEAVIQQFM 291 (377)
T ss_dssp BTTBCTTSCBCSSCCBCCCCHHHHHHHHHHH-----HTHHHHHHHHHHHHHHHHHHHHHTTTTTTTCBCCCCSCBCCSSE
T ss_pred hcCCCCCCceeeccccCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCccccccCCCCCcceEEEE
Confidence 31 1223334333333333 335566667777777888888877554211122221 133
Q ss_pred EeecCcccccCCCCHHHHHHHHHHhcCeEeecCCC--CCC-------------------CCeEEEEee--cCHHHHHHHH
Q 014769 349 MVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIY--VGL-------------------KNWLRIAFC--AEPSALKDGL 405 (419)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~--~~~-------------------~~~~Ris~~--~~~~~l~~~l 405 (419)
.+.++.. .+..++...| +++||.+.++.. +.. ...+||++. .++++++..+
T Consensus 292 ~~~~~~~-----~~~~~l~~~L-~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lp~~~~~t~~di~~v~ 365 (377)
T 3ju7_A 292 PILCPEE-----VRNKQVIEDL-KKQKIEARLYFSPSCHQQVLFRNYKSTDLTRTNKIAKRIVSLPLWEGMTKEIVEQIV 365 (377)
T ss_dssp EEECCTT-----SCHHHHHHHH-HTTTBCCBCTTSSCGGGSGGGTTSCBSCCHHHHHHHHHEEEECCCTTCCHHHHHHHH
T ss_pred EEEeCCh-----hhHHHHHHHH-HHCCCceecccCCccccchhhhcCCCCCCHHHHHHHhCEEECCCCCCCCHHHHHHHH
Confidence 3444421 1356666666 778999877652 110 247999994 5899999999
Q ss_pred HHHHHHHHH
Q 014769 406 GRMKAFCQR 414 (419)
Q Consensus 406 ~~l~~~~~~ 414 (419)
+.|++++..
T Consensus 366 ~~l~~~~~~ 374 (377)
T 3ju7_A 366 ICLGQKVVS 374 (377)
T ss_dssp HHHTC----
T ss_pred HHHHHHHhc
Confidence 999888765
No 207
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.94 E-value=1.7e-24 Score=208.35 Aligned_cols=311 Identities=16% Similarity=0.153 Sum_probs=211.2
Q ss_pred ChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh---------cCC
Q 014769 60 TAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL---------ARP 130 (419)
Q Consensus 60 ~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l---------~~~ 130 (419)
..+.+.+++.+++... .|.+..+..++|+++++++ +. +++++++++++++..++.++ .++
T Consensus 41 ~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~------g~--~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~ 109 (437)
T 3bb8_A 41 IGTKELQLMVEASLDG---WLTTGRFNDAFEKKLGEYL------GV--PYVLTTTSGSSANLLALTALTSPKLGVRALKP 109 (437)
T ss_dssp CCHHHHHHHHHHHHHC---CCBSCHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHTTCGGGGGGSCCT
T ss_pred CCHHHHHHHHHHHHcC---CcCCChHHHHHHHHHHHHH------CC--CcEEEeCCHHHHHHHHHHHhhhcccccccCCC
Confidence 3567888888887643 3444467899999999998 33 26788888889999999998 789
Q ss_pred CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHH
Q 014769 131 GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMAR 210 (419)
Q Consensus 131 gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~ 210 (419)
||+|+++.|+|.++...+...|.+++.++++++ ++.+|++.+++++++++++|++++ ++|...+ +++|.++|+
T Consensus 110 gd~Vi~~~~~~~~~~~~~~~~g~~~~~v~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~ 182 (437)
T 3bb8_A 110 GDEVITVAAGFPTTVNPTIQNGLIPVFVDVDIP-TYNVNASLIEAAVSDKTKAIMIAH---TLGNLFD---LAEVRRVAD 182 (437)
T ss_dssp TCEEEECSSSCHHHHHHHHHTTCEEEECCEETT-TTEECGGGHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHH
T ss_pred cCEEEECCCCcHHHHHHHHHcCCEEEEEeccCc-cCCcCHHHHHHhcCCCCeEEEEeC---CCCChhc---HHHHHHHHH
Confidence 999999999999999999999999999887642 578999999999988888888875 2344355 899999999
Q ss_pred hCCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHh---hh
Q 014769 211 KLRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKD---CL 286 (419)
Q Consensus 211 ~~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~---~~ 286 (419)
++|+++|+|++|+.+. +++. .++...+ +++.||+|.++++|.+.|+++++++ .+...++. +.
T Consensus 183 ~~~~~li~D~a~~~g~~~~~~------~~~~~~d-~~~~s~~~~k~l~~g~gg~~~~~~~-------~~~~~~~~~~~~~ 248 (437)
T 3bb8_A 183 KYNLWLIEDCCDALGSTYDGK------MAGTFGD-IGTVSFYPAKHITMGEGGAVFTQSA-------ELKSIIESFRDWG 248 (437)
T ss_dssp HHTCEEEEECTTCTTCEETTE------ETTSSSS-EEEEECSTTSSSCCSSCEEEEESCH-------HHHHHHHHHHBTT
T ss_pred HcCCEEEEECccccCceECCe------ecccccC-EEEEECcCCcCCCCCCeEEEEeCCH-------HHHHHHHHHHHhC
Confidence 9999999999998532 2211 1121111 6677898888889999999998651 12222221 10
Q ss_pred c-------------------------------------cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHH
Q 014769 287 S-------------------------------------IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDG 329 (419)
Q Consensus 287 ~-------------------------------------~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ 329 (419)
. .....+.+...++...++. +.+..++.+++.+++.+.
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~-----~~~~~~~~~~~~~~l~~~ 323 (437)
T 3bb8_A 249 RDCYCAPGCDNTCKKRFGQQLGSLPFGYDHKYTYSHLGYNLKITDMQAACGLAQLER-----IEEFVEKRKANFKYLKDA 323 (437)
T ss_dssp BCC----------------CCSCCCTTCCGGGCBCSCCCBCCCBHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccccccccccCcccCCCHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHH
Confidence 0 0001123333333333332 344455557778888899
Q ss_pred hhcCCCCCCCCCC------CceEEEE-eecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCC----------------
Q 014769 330 VKEIPCISCPNKP------EGSMVTM-VKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGL---------------- 386 (419)
Q Consensus 330 l~~~~~~~~~~~p------~~g~~~~-~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~---------------- 386 (419)
|++++++..+... ....|.+ ++.+. + .+..++...| .++||.+.++.....
T Consensus 324 L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~~L-~~~GI~v~~~~~~~~~~~p~~~~~~~~~~~~ 397 (437)
T 3bb8_A 324 LQSCADFIELPEATENSDPSWFGFPITLKEDS----G-VSRIDLVKFL-DEAKVGTRLLFAGNLTRQPYFHDVKYRVVGE 397 (437)
T ss_dssp GGGGTTTEECCCCCTTEECCCSSEEEEECGGG----S-SCHHHHHHHH-HHTTBCCBCCTTSSGGGSGGGSSCCCEECSC
T ss_pred hhccCCccccCCCCCCCceeeEEEEEEECCcC----c-CcHHHHHHHH-HHCCCceeccCCcccccCchhhccCccccCC
Confidence 9887665422111 1112332 33321 0 1456777666 567999988754110
Q ss_pred --------CCeEEEEee--cCHHHHHHHHHHHHHHHH
Q 014769 387 --------KNWLRIAFC--AEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 387 --------~~~~Ris~~--~~~~~l~~~l~~l~~~~~ 413 (419)
.+.+||++. .++++++.+++.|+++++
T Consensus 398 ~~~~~~~~~~~lrl~~~~~~t~~di~~i~~~l~~~~~ 434 (437)
T 3bb8_A 398 LTNTDRIMNQTFWIGIYPGLTHDHLDYVVSKFEEFFG 434 (437)
T ss_dssp CHHHHHHHHHEEEECCSTTCCHHHHHHHHHHHHHHTT
T ss_pred CcHHHHHhcCEEEecCCCCCCHHHHHHHHHHHHHHHc
Confidence 124899984 589999999999988764
No 208
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=99.94 E-value=5.1e-25 Score=208.46 Aligned_cols=283 Identities=16% Similarity=0.106 Sum_probs=195.2
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH-----hhcCCEEEEEe
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA-----QRKQVEVRHFD 159 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~-----~~~g~~~~~~~ 159 (419)
...+|++.++++. + .+++++++++++|+.. +..++++||+|++++|+|.+....+ ...|.++..++
T Consensus 68 ~~~~l~~~la~l~------g--~~~~~~~~sG~~Ai~~-~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~ 138 (400)
T 3nmy_A 68 TRFAYERCVAALE------G--GTRAFAFASGMAATST-VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVD 138 (400)
T ss_dssp HHHHHHHHHHHHH------T--CSEEEEESSHHHHHHH-HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEEC
T ss_pred HHHHHHHHHHHHh------C--CCCEEEecCHHHHHHH-HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEEC
Confidence 4567888888876 2 2367777777999998 5667889999999999998654443 34588888876
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccC
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFG 239 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~ 239 (419)
.. |++.+++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|....+.. ++ .++
T Consensus 139 ~~-------d~~~l~~~i~~~~~~v~~e~~~np~G~~~~---l~~i~~la~~~g~~livDe~~~~~~~~~----~~-~~g 203 (400)
T 3nmy_A 139 LT-------DPAAFKAAIRADTKMVWIETPTNPMLKLVD---IAAIAVIARKHGLLTVVDNTFASPMLQR----PL-SLG 203 (400)
T ss_dssp TT-------SHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHTTCEEEEECTTTHHHHCC----GG-GGT
T ss_pred CC-------CHHHHHHHhccCCCEEEEECCCCCCCeeec---HHHHHHHHHHcCCEEEEECCCcccccCC----hh-hcC
Confidence 52 789999999988999999999999999998 9999999999999999999998543321 11 122
Q ss_pred CCCcEEEEecCCCcCCCCCceeEE--EEeeCCCCccchhhHHHHHHhhhc-cccCCchHHHHHHHHHHcccchHHHHHHH
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGW--LVTNDPNGIFQKSGIIDSIKDCLS-IYSDIPTFIQGAIPQILEKTKEDFFCKLI 316 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~--~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 316 (419)
..+++.|+||.++.+|.++|. +++.+ +++.+.++.... .....++...+++...++. +..+.
T Consensus 204 ---~div~~S~sK~l~g~g~~~gG~~vv~~~-------~~~~~~l~~~~~~~g~~~~~~~a~~~l~~l~~-----l~~r~ 268 (400)
T 3nmy_A 204 ---ADLVVHSATKYLNGHSDMVGGIAVVGDN-------AELAEQMAFLQNSIGGVQGPFDSFLALRGLKT-----LPLRM 268 (400)
T ss_dssp ---CSEEEEETTTTTTCSSSCCCEEEEECSC-------HHHHHHHHHHHHHHCCBCCHHHHHHHHHHHTT-----HHHHH
T ss_pred ---CcEEEecCccccCCCCCcceeEEEEeCC-------HHHHHHHHHHHHhcCCCCCHHHHHHHHHhHhH-----HHHHH
Confidence 348899999999888888766 44433 256677765543 3445566665555555543 45566
Q ss_pred HHHHHHHHHHHHHhhcCCCCCCCCCCC----------------ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeec
Q 014769 317 DTLRESAEICYDGVKEIPCISCPNKPE----------------GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTP 380 (419)
Q Consensus 317 ~~~~~~~~~l~~~l~~~~~~~~~~~p~----------------~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~ 380 (419)
++..++...+.+.|++.|.+..+..|. .|.++++.++... .....+++.+ +..++.++.
T Consensus 269 ~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~----~~~~~~~~~l-~~~~~~~s~ 343 (400)
T 3nmy_A 269 RAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGF----DAAKRFCEKT-ELFTLAESL 343 (400)
T ss_dssp HHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHH----HHHHHHHHHC-SSSEECSCC
T ss_pred HHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcH----HHHHHHHHcC-CcceEecCC
Confidence 677888888888898876654333332 3667788886310 0123344333 334444455
Q ss_pred CCCCC-----------------------CCCeEEEEeecCHHHHHHHHHHHHHHHH
Q 014769 381 GIYVG-----------------------LKNWLRIAFCAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 381 g~~~~-----------------------~~~~~Ris~~~~~~~l~~~l~~l~~~~~ 413 (419)
|..+. .++.+|+|++.. +.+++++.|++++.
T Consensus 344 G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle--~~~dli~dl~~al~ 397 (400)
T 3nmy_A 344 GGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIE--DLGDLRGDLERALV 397 (400)
T ss_dssp CSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSS--CHHHHHHHHHHHHC
T ss_pred CCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcC--CHHHHHHHHHHHHh
Confidence 44321 146899999863 34445566666664
No 209
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.94 E-value=6.2e-24 Score=208.32 Aligned_cols=333 Identities=11% Similarity=0.022 Sum_probs=219.4
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhc-------C-CCC
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLA-------R-PGA 132 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~-------~-~gd 132 (419)
++.+...+.....+.....|...++..++++.+.+++.+..|.+ ++++++|+|+++++..++.++. + +|+
T Consensus 121 ~~~~~~~~l~~~~n~~~~~~~~s~~~~~le~~~~~~la~l~g~~--~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~ 198 (515)
T 2jis_A 121 PHALAGRIITESLNTSQYTYEIAPVFVLMEEEVLRKLRALVGWS--SGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGL 198 (515)
T ss_dssp HHHHHHHHHHHHHCCCTTCTTTCHHHHHHHHHHHHHHHHHHTCS--SCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCG
T ss_pred HHHHHHHHHHHHhccCCCchhhchHHHHHHHHHHHHHHHHhCCC--CCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCc
Confidence 44444433333333333356655566677777666666655543 7899999999999998888863 2 565
Q ss_pred ------eEEeeCCCCCCcHHHHhhcCC---EEEEEeccCCCCcccChHHHHHhhcC------CccEEEEeCCCCccccCC
Q 014769 133 ------NVLLPRPGWPYYEGIAQRKQV---EVRHFDLLPERNWEVDLDAVEALADK------NTAAMVIINPGNPCGNVF 197 (419)
Q Consensus 133 ------~vlv~~p~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~~v~i~~p~nptG~~~ 197 (419)
.|++..++|+.+...+...|. +++.++++ .++.+|+++|++++++ ++++|++++|+||||.+.
T Consensus 199 ~~~~~~~vl~s~~~h~s~~~~~~~~g~g~~~v~~v~~~--~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~ 276 (515)
T 2jis_A 199 RTLPPLALFTSKECHYSIQKGAAFLGLGTDSVRVVKAD--ERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFD 276 (515)
T ss_dssp GGSCCEEEEEETTSCTHHHHHHHHTTSCGGGEEEECBC--TTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBC
T ss_pred cccCCeEEEECCCccHHHHHHHHHcCCCCCcEEEEecC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCcc
Confidence 889999999999888888888 78888875 3568999999998865 378889999999999998
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-CccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchh
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-PMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKS 276 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~ 276 (419)
+ +++|.++|+++|+++++|++|+.+......+. .+..+. ...+++.|++|+++.| .++|+++++++..
T Consensus 277 ~---l~~I~~la~~~g~~l~vD~a~~~~~~~~~~~~~~~~g~~--~aD~v~~s~hK~l~~p-~g~G~l~~~~~~~----- 345 (515)
T 2jis_A 277 P---LEAIADVCQRHGLWLHVDAAWGGSVLLSQTHRHLLDGIQ--RADSVAWNPHKLLAAG-LQCSALLLQDTSN----- 345 (515)
T ss_dssp C---HHHHHHHHHHHTCEEEEEETTGGGGGGCTTTGGGGTTGG--GCSEEEECTTSTTCCC-SCCEEEEESCCSC-----
T ss_pred C---HHHHHHHHHHcCCeEEEehhhhhHHHhChhhHhhcCCCc--cCCEEEECcccccCCC-CCeeEEEEeChHH-----
Confidence 8 89999999999999999999998766432221 122221 2237778999986544 5799999976411
Q ss_pred hHHHHH----Hhhh-c--------cc---c------CCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 277 GIIDSI----KDCL-S--------IY---S------DIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 277 ~~~~~l----~~~~-~--------~~---~------~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
+++.. ..+. . .. . ....+.++++..++. .+.+++..++..++++++.+.|+++|
T Consensus 346 -~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~~rr~~al~~~~~l~~lg---~~g~~~~~~~~~~~a~~l~~~L~~~~ 421 (515)
T 2jis_A 346 -LLKRCHGSQASYLFQQDKFYDVALDTGDKVVQCGRRVDCLKLWLMWKAQG---DQGLERRIDQAFVLARYLVEEMKKRE 421 (515)
T ss_dssp -HHHHHHCC---------CCSCGGGCCGGGCSCSSCCCCHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred -HHHHHhcCCchhccCCcccccccCCCCCCCCCCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 22221 0000 0 00 0 011333444444443 36688888999999999999999988
Q ss_pred CCCCCCCCCceEEEEeecCcccccC---CCCH-H-------HHHHHHHHhcCeEeec-CCCCCCCCeEEEEee---cCHH
Q 014769 335 CISCPNKPEGSMVTMVKLNPWLLED---INDD-I-------EFALKLAKEESVIVTP-GIYVGLKNWLRIAFC---AEPS 399 (419)
Q Consensus 335 ~~~~~~~p~~g~~~~~~~~~~~~~~---~~~~-~-------~~~~~ll~~~gv~v~~-g~~~~~~~~~Ris~~---~~~~ 399 (419)
+++++..|..+.+.+...+.. ..+ ..+. . .+...+ .+.|+.... ....+..+++|++++ ++++
T Consensus 422 g~~~~~~~~~~~v~f~~~p~~-~~~~~~~~~~~~~l~~~~~~l~~~l-~~~G~~~~~~~~~~~~~~~lRis~~~~~~t~e 499 (515)
T 2jis_A 422 GFELVMEPEFVNVCFWFVPPS-LRGKQESPDYHERLSKVAPVLKERM-VKEGSMMIGYQPHGTRGNFFRVVVANSALTCA 499 (515)
T ss_dssp TEEESSCCSSSEEEEEECCGG-GTTCTTSTTHHHHHHTHHHHHHHHH-HHHTSCEEEEEEETTEEEEEEEECCCTTCCHH
T ss_pred CEEEeCCCCeeEEEEEEeCcc-ccccccchhHHHHHHHHHHHHHHHH-HhcCCEEEEEEEECCceEEEEEEeCCCCCCHH
Confidence 888554555565554333321 000 0010 1 134444 455764422 111122468999994 6899
Q ss_pred HHHHHHHHHHHHHHH
Q 014769 400 ALKDGLGRMKAFCQR 414 (419)
Q Consensus 400 ~l~~~l~~l~~~~~~ 414 (419)
+++.+++.|++++++
T Consensus 500 did~~~~~l~~~~~~ 514 (515)
T 2jis_A 500 DMDFLLNELERLGQD 514 (515)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999999987654
No 210
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.94 E-value=1.1e-24 Score=211.75 Aligned_cols=332 Identities=10% Similarity=0.025 Sum_probs=231.3
Q ss_pred hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC--------CcEEEcccHHHHHHHHHHHhcC---
Q 014769 61 AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA--------DDVYVTLGCKQAVEVILSVLAR--- 129 (419)
Q Consensus 61 ~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~--------~~i~~t~g~~~al~~~~~~l~~--- 129 (419)
+..+.+.+..++.. ....|....+..++++.+++++.+.+|.+... ...++|+|+|+++..++.+.+.
T Consensus 92 ~~~~~~~~~~~~n~-~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~ 170 (481)
T 4e1o_A 92 PSLLGDMLADAINC-LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKI 170 (481)
T ss_dssp HHHHHHHHHHHHCC-CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCc-ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHH
Confidence 34455555555543 34577777788999999999999988865432 3678999999999888877642
Q ss_pred ----------------CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEe
Q 014769 130 ----------------PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVII 187 (419)
Q Consensus 130 ----------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~ 187 (419)
+++.|+++.++|.++...+...|.+++.++++ .++.+|+++|+++++++ +.+|+++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~~~~~~g~~~~~v~~~--~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~ 248 (481)
T 4e1o_A 171 LEMKTSEPDADESSLNARLVAYASDQAHSSVEKAGLISLVKMKFLPVD--DNFSLRGEALQKAIEEDKQRGLVPVFVCAT 248 (481)
T ss_dssp HHHHHHCTTSCHHHHHTTEEEEEETTSCHHHHHHHHHHTCEEEEECCC--TTSCCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHhhhcCcccccccccCCeEEEEcCcchHHHHHHHHhCCCceEEEEcC--CCCcCCHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 46789999999999999888899999999874 46789999999998653 5667888
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
.++|+||.+-+ +++|.++|+++|+++++|++|+.+.+....... +..+.. -..+..+.+|+++.| ..+|++++
T Consensus 249 ~~~t~~G~id~---l~~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~--aDsi~~~~hK~l~~p-~g~g~l~~ 322 (481)
T 4e1o_A 249 LGTTGVCAFDC---LSELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEY--ADSFTFNPSKWMMVH-FDCTGFWV 322 (481)
T ss_dssp BSCTTTCCBCC---HHHHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGG--CSEEEECHHHHSSCC-SSCEEEEE
T ss_pred cCCCCCcCcCC---HHHHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCccc--CCEEEEChHHhcCCC-CceEEEEE
Confidence 99999999977 999999999999999999999876432221111 111111 124556899986554 55788887
Q ss_pred eCCCCccchhhHHH-HHHhhhcc---------------c--cC--CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHH
Q 014769 267 NDPNGIFQKSGIID-SIKDCLSI---------------Y--SD--IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEIC 326 (419)
Q Consensus 267 ~~~~~~~~~~~~~~-~l~~~~~~---------------~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l 326 (419)
+++ .... .+.....+ . .+ ...+.++++...+. .+.++++.++..++++++
T Consensus 323 ~~~-------~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g---~~g~~~~~~~~~~~a~~l 392 (481)
T 4e1o_A 323 KDK-------YKLQQTFSVNPIYLRHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFG---VKNLQAHVRHGTEMAKYF 392 (481)
T ss_dssp SBH-------HHHHTTTCCCCGGGCCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
T ss_pred eCH-------HHHHHHhcCCchhccCcccCCCCCcccccccCCCCccHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHH
Confidence 652 1111 11100000 0 00 12333444444442 467888899999999999
Q ss_pred HHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHH
Q 014769 327 YDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKD 403 (419)
Q Consensus 327 ~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~ 403 (419)
.+.|+++|+++++ .+....+++++++... ....++..++.++..+.+.|+.. ....++|+++. +++++|++
T Consensus 393 ~~~L~~~~g~~~~-~~~~~~~v~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~-~g~~~lR~~~~~~~tt~~di~~ 466 (481)
T 4e1o_A 393 ESLVRNDPSFEIP-AKRHLGLVVFRLKGPN----SLTENVLKEIAKAGRLFLIPATI-QDKLIIRFTVTSQFTTRDDILR 466 (481)
T ss_dssp HHHHHTCTTEECC-SCCCSSEEEEEESSCH----HHHHHHHHHHHHHCSSBCEEEEE-TTEEEEEEECCCTTCCHHHHHH
T ss_pred HHHHhcCCCeEEe-cCCceeEEEEEeCCch----HHHHHHHHHHHhCCeEEEEeeEE-CCEEEEEEEeCCCCCCHHHHHH
Confidence 9999999898854 4444556677775311 12456777776553355555432 23468999973 47899999
Q ss_pred HHHHHHHHHHHHhc
Q 014769 404 GLGRMKAFCQRHTK 417 (419)
Q Consensus 404 ~l~~l~~~~~~~~~ 417 (419)
++++|+++++++.+
T Consensus 467 ~~~~i~~~~~~l~~ 480 (481)
T 4e1o_A 467 DWNLIRDAATLILS 480 (481)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999988764
No 211
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.94 E-value=2.1e-26 Score=221.45 Aligned_cols=290 Identities=10% Similarity=0.035 Sum_probs=191.9
Q ss_pred CCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769 81 ATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160 (419)
Q Consensus 81 ~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~ 160 (419)
.+.....++++.+++ + +.+ +++++|+|+++++..++.+++++||+|+++.|+|.++...+...|..+++++.
T Consensus 54 ~~~~~~~~~~~~la~-~------g~~-~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~~~~G~~~~~v~~ 125 (446)
T 2x3l_A 54 HPEEVILKSMKQVEK-H------SDY-DGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHALDISQQEGHFIET 125 (446)
T ss_dssp SCSSHHHHHHHHHCS-C------TTE-EEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHHHHHTCCEEECEE
T ss_pred CcchHHHHHHHHHHh-c------CCC-ceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHHHHcCCeEEEEeC
Confidence 344455677777777 5 333 68999999999999999999999999999999999998888889999988887
Q ss_pred cCCCC----cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCc
Q 014769 161 LPERN----WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPM 235 (419)
Q Consensus 161 ~~~~~----~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~ 235 (419)
..+.+ +.+|++.+ +.++++++++++ .|+||.+.+ +++|.++|+++|+++|+|++|+. +.|.+. +.+.
T Consensus 126 ~~~~~~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~---l~~I~~l~~~~~~~livDea~~~~~~f~~~-~~~~ 197 (446)
T 2x3l_A 126 HQSPLTNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFN---VEEVIKSLHQLNIPVLIDEAHGAHFGLQGF-PDST 197 (446)
T ss_dssp EECTTTSSEEEEEC----------CCEEEEES-SCTTSCCCC---HHHHHHHHHHTTCCEEEECTTCTTTTSTTS-CCCG
T ss_pred eeccccCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecC---HHHHHHHHHhcCCeEEEcchhhhhhccCCC-CCCh
Confidence 32222 56788877 455788999999 555999999 88999999999999999999986 444443 2233
Q ss_pred cccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh--ccccCCchHHHHHHHHHHcccchHHHH
Q 014769 236 GLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL--SIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 236 ~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
..++.+ +++.|+||.+ .++.++||++++++ +. + ...++... ..+++++.....++..+++.......+
T Consensus 198 ~~~g~D---i~~~S~~K~l-~~~~g~g~l~~~~~--~i---~-~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~ 267 (446)
T 2x3l_A 198 LNYQAD---YVVQSFHKTL-PALTMGSVLYIHKN--AP---Y-RENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDST 267 (446)
T ss_dssp GGGTCS---EEEECHHHHS-SSCTTCEEEEEETT--CT---T-HHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCH
T ss_pred HHcCCC---EEEECCcccc-ccccccEEEEEcCC--cC---C-HHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHH
Confidence 333332 8889999963 33345899999763 22 1 12222221 113344544444443333221111111
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee-cCCCCCCCCeEEE
Q 014769 314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT-PGIYVGLKNWLRI 392 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~-~g~~~~~~~~~Ri 392 (419)
+..++.+++.+.+++. ++.++ .+.++.++|+.++. .+..++...|.+ +||.+. +| .+++|+
T Consensus 268 ~~~~~~~~l~~~l~~~-----g~~~~-~~~~~~~l~i~~~~------~~~~~l~~~L~~-~GI~v~~~g-----~~~iRi 329 (446)
T 2x3l_A 268 LFFAKRAQLIECLENK-----GFEML-QVDDPLKLLIKYEG------FTGHDIQNWFMN-AHIYLELAD-----DYQALA 329 (446)
T ss_dssp HHHHHHHHHHHHHHHH-----TCEEE-ECSSTTEEEEECTT------SCHHHHHHHHHH-TTEEESEEC-----SSCEEE
T ss_pred HHHHHHHHHHHHHHHc-----CCEEC-cCCCCeEEEEEeCC------cCHHHHHHHHHH-CCCEEEecC-----CCEEEE
Confidence 2344455555555554 45523 34445578888752 246677777754 599987 54 368999
Q ss_pred Eee--cCHHHHHHHHHHHHHHHHHH
Q 014769 393 AFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 393 s~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
+++ .+++++ ++++.|+++++++
T Consensus 330 ~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 330 ILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp ECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred EeecCCCHHHH-HHHHHHHHHHHhh
Confidence 995 478899 9999999988655
No 212
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.94 E-value=2e-24 Score=207.84 Aligned_cols=359 Identities=11% Similarity=0.029 Sum_probs=218.5
Q ss_pred hHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCC------CCCCHHHHHHHHHHH
Q 014769 24 TVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYAT------NSGIPPARRAIADYL 97 (419)
Q Consensus 24 ~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~------~~g~~~lr~~ia~~l 97 (419)
.|..++++-..+. .+.|.|-.+. + ++++.|.+++...+.+....+|+. ..-..++++...+.+
T Consensus 41 ~~~~~~~~e~~rq-----~~~i~lias~-----n-~~~~~V~eA~~~~l~~~y~~G~~g~r~~~G~~~~~~lE~~a~~~~ 109 (490)
T 2a7v_A 41 EMWELLQREKDRQ-----CRGLELIASE-----N-FCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELLCQRRA 109 (490)
T ss_dssp HHHHHHHHHHHHH-----HHSEECCTTC-----C-CCCHHHHHHHTSGGGTCCCCC------------CTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH-----HcCceEECCC-----C-CCCHHHHHHHHHHHcCCCccCCCcccccCccHHHHHHHHHHHHHH
Confidence 3666665433322 2456666542 2 368999999988775532223332 222347774444555
Q ss_pred HhhCCCCCCCC---cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---H-----HHhhcCCEE--EEEeccCCC
Q 014769 98 SRDLPYKLSAD---DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---G-----IAQRKQVEV--RHFDLLPER 164 (419)
Q Consensus 98 ~~~~~~~~~~~---~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~-----~~~~~g~~~--~~~~~~~~~ 164 (419)
.+.+| .+.+ ..++++|+++|+..++.++++|||+|+++++.|.++. . .+...|..+ ..+++++ .
T Consensus 110 a~l~g--~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~vd~-~ 186 (490)
T 2a7v_A 110 LEAFD--LDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLNP-K 186 (490)
T ss_dssp HHHTT--CCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCBCT-T
T ss_pred HHHcC--CCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccccc-c
Confidence 55454 3343 2355668899999999999999999999999886532 1 223345433 3344433 3
Q ss_pred CcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc-cccCCCCCCCccccCCCC
Q 014769 165 NWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH-LTFGSIPYTPMGLFGSIV 242 (419)
Q Consensus 165 ~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~-~~~~~~~~~~~~~~~~~~ 242 (419)
++.+|++++++++.. ++++++++.++||+ ..+ +++|.++|+++|+++++|++|.. +.+.+....++. ..
T Consensus 187 ~~~iD~d~le~~l~~~~~klIi~~~s~~~~--~~d---l~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~--~a-- 257 (490)
T 2a7v_A 187 TGLIDYNQLALTARLFRPRLIIAGTSAYAR--LID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK--HA-- 257 (490)
T ss_dssp TCSBCHHHHHHHHHHHCCSEEEECCSSCCS--CCC---HHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG--TC--
T ss_pred cCCcCHHHHHHHHhhcCCcEEEEcCCCCCC--ccc---HHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC--CC--
Confidence 468999999998853 67888888888875 445 89999999999999999999763 333333222331 12
Q ss_pred cEEEEecCCCcCCCCCceeEEEEeeCCCCccch-------hhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchHHHH
Q 014769 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQK-------SGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~-------~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
.+++.|+||.+ .|++.|++++++.-...+. -++.+.++.... ..++++.....++..++.....+.++
T Consensus 258 -Div~~S~hK~l--~Gp~GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~ 334 (490)
T 2a7v_A 258 -DIVTTTTHKTL--RGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFR 334 (490)
T ss_dssp -SEEEEESSGGG--CSCSCEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHH
T ss_pred -CEEEECCcccC--ccccchheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHH
Confidence 27888999985 5677899999763100000 024455554432 22345555455555555443223457
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCC-----CCC
Q 014769 314 KLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVG-----LKN 388 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~-----~~~ 388 (419)
+..+++.++++.+.+.|.+. |+.++..+...+++|+.+.... .+..++ .++|++.||.+..+..++ .+.
T Consensus 335 ~~~~~~~~na~~L~~~L~~~-G~~v~~~~t~t~lv~vdl~~~g----~~~~~~-~~~L~~~GI~v~~~~~p~d~~p~~~~ 408 (490)
T 2a7v_A 335 EYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKG----LDGARA-ERVLELVSITANKNTCPGDRSAITPG 408 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECTTTT----CCHHHH-HHHHHHTTEECEEECCTTCCCSSSCS
T ss_pred HHHHHHHHHHHHHHHHHHHc-CcEEecCCCCCeEEEEEeCCCC----CCHHHH-HHHHHhCCeEEecCccCCCCCCCCCC
Confidence 78889999999999999987 8874422345678888876421 134444 555688899998654333 257
Q ss_pred eEEEEe------ecCHHHHHHHHHHHHHHHHH
Q 014769 389 WLRIAF------CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 389 ~~Ris~------~~~~~~l~~~l~~l~~~~~~ 414 (419)
.+||+. +.++++++++++.|.+++..
T Consensus 409 ~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~~ 440 (490)
T 2a7v_A 409 GLRLGAPALTSRQFREDDFRRVVDFIDEGVNI 440 (490)
T ss_dssp EEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred ceEecccccccCCCCHHHHHHHHHHHHHHHHh
Confidence 899987 24789999999999988863
No 213
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.93 E-value=1.7e-24 Score=209.71 Aligned_cols=338 Identities=11% Similarity=0.019 Sum_probs=228.2
Q ss_pred HHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCC-------CcEEEcccHHHHHHHHHHHhcC-----
Q 014769 62 VEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSA-------DDVYVTLGCKQAVEVILSVLAR----- 129 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~-------~~i~~t~g~~~al~~~~~~l~~----- 129 (419)
..+.+.+...+. .....|...++..++++.+++|+.+.+|.+... ...++|+|+|+++..++.+.+.
T Consensus 88 ~~~~~~l~~~~n-~~~~~~~~~p~~~~lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~ 166 (475)
T 3k40_A 88 AIVADMLSGAIA-CIGFTWIASPACTELEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKE 166 (475)
T ss_dssp HHHHHHHHHHHC-CCSSSCCCCHHHHHHHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-ccccCccCCcHHHHHHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHH
Confidence 344455555553 334467777788999999999999988865422 3689999999998888777632
Q ss_pred --------------CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC------ccEEEEeCC
Q 014769 130 --------------PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN------TAAMVIINP 189 (419)
Q Consensus 130 --------------~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~i~~p 189 (419)
+++.|+++.++|.++...+...|.+++.++++ .++ +|+++|+++++++ +.+|+++.+
T Consensus 167 ~~~~~~~~~~~~~~~~~~vi~s~~~H~s~~~~~~~~g~~~~~v~~d--~~~-~d~~~L~~~i~~~~~~~~~~~~v~~~~~ 243 (475)
T 3k40_A 167 VKELHPEWDEHTILGKLVGYCSDQAHSSVERAGLLGGVKLRSVQSE--NHR-MRGAALEKAIEQDVAEGLIPFYAVVTLG 243 (475)
T ss_dssp HHHHCTTSCHHHHHHHEEEEEETTSCHHHHHHHHHHTCEEEEECCB--TTB-CCHHHHHHHHHHHHHTTCEEEEEEEEBS
T ss_pred hhccCcccccccccCCeEEEECCCchHHHHHHHHHcCCceEEEECC--CCC-cCHHHHHHHHHHHHHCCCccEEEEEEec
Confidence 24689999999999999999999999999875 346 9999999988753 456788899
Q ss_pred CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC-ccccCCCCcEEEEecCCCcCCCCCceeEEEEeeC
Q 014769 190 GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP-MGLFGSIVPVITLGSISKRWLVPGWRFGWLVTND 268 (419)
Q Consensus 190 ~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~-~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~ 268 (419)
+|+||.+-+ +++|.++|+++|+++++|++|+...+....... +..+. .-..+..+++|+++. ...+|++++++
T Consensus 244 ~t~~G~~~~---l~~I~~la~~~~~~lhvD~A~~~~~~~~~~~~~~~~gi~--~~Ds~~~~~hK~l~~-p~g~g~l~~~~ 317 (475)
T 3k40_A 244 TTNSCAFDY---LDECGPVGNKHNLWIHVDAAYAGSAFICPEYRHLMKGIE--SADSFNFNPHKWMLV-NFDCSAMWLKD 317 (475)
T ss_dssp CTTTCCBCC---HHHHHHHHHHTTCEEEEECTTGGGGGGSGGGGGGGTTGG--GCSEEEECHHHHSSC-CSSCEEEEESS
T ss_pred CCCCcCcCC---HHHHHHHHHHhCCeEEEeHHhHHHHHhCHhhHHHhcCcc--cCCEEEECchhccCC-CCceEEEEEeC
Confidence 999999988 999999999999999999999875432211111 11111 112556789998543 45688888876
Q ss_pred CCCccchhh-HHHHHHhh--------hccc--cC--CchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 014769 269 PNGIFQKSG-IIDSIKDC--------LSIY--SD--IPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC 335 (419)
Q Consensus 269 ~~~~~~~~~-~~~~l~~~--------~~~~--~~--~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 335 (419)
+..+.+.-. ....+... .... .+ ...+.++++...+. .+.++++.++..++++++.+.|+++|+
T Consensus 318 ~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~~~~sr~~~~l~l~~al~~~g---~~g~~~~~~~~~~~a~~l~~~L~~~~g 394 (475)
T 3k40_A 318 PSWVVNAFNVDPLYLKHDMQGSAPDYRHWQIPLGRRFRALKLWFVLRLYG---VENLQAHIRRHCNFAKQFGDLCVADSR 394 (475)
T ss_dssp GGGC---------------------------CCCGGGTHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSTT
T ss_pred HHHHHHHhcCCccccCCCcCCCCCCcccccccCCCcccHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 432110000 00011100 0000 01 11233333333332 467888899999999999999999889
Q ss_pred CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee---cCHHHHHHHHHHHHHHH
Q 014769 336 ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC---AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 336 ~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~---~~~~~l~~~l~~l~~~~ 412 (419)
++++..| ....++++++... ....++..+|.++.++.+.|+..++ ..++|+++. +++++|+++++.|++++
T Consensus 395 ~~l~~~~-~~~iv~f~~~~~~----~~~~~l~~~L~~~g~~~~~~~~~~g-~~~lR~~~~~~~tt~~di~~~~~~i~~~~ 468 (475)
T 3k40_A 395 FELAAEI-NMGLVCFRLKGSN----ERNEALLKRINGRGHIHLVPAKIKD-VYFLRMAICSRFTQSEDMEYSWKEVSAAA 468 (475)
T ss_dssp EEESSCC-BTTEEEEEESSCH----HHHHHHHHHHHHHTSCBCEEEEETT-EEEEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred EEEecCC-ceEEEEEEeCCch----HHHHHHHHHHHhCCcEEEEeeEECC-EEEEEEEeCCCCCCHHHHHHHHHHHHHHH
Confidence 8855334 4445566664311 1246777777666555566554333 578999984 47899999999999999
Q ss_pred HHHhcc
Q 014769 413 QRHTKK 418 (419)
Q Consensus 413 ~~~~~~ 418 (419)
+++.++
T Consensus 469 ~~~~~~ 474 (475)
T 3k40_A 469 DEMEQE 474 (475)
T ss_dssp HHHHTC
T ss_pred HHHhcc
Confidence 887653
No 214
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.93 E-value=7.5e-24 Score=203.78 Aligned_cols=280 Identities=19% Similarity=0.166 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHH-hcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEecc
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSV-LARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLL 161 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~-l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~ 161 (419)
.++++.+++++ +.+++++++++|++.+.+.+..+ ..++||+|+++.++|+.+...+ +..|++++.++.
T Consensus 111 ~~~~~~la~~~------g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~- 183 (438)
T 1wyu_A 111 FEYQTMIAELA------GLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPL- 183 (438)
T ss_dssp HHHHHHHHHHH------TSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECC-
T ss_pred HHHHHHHHHHh------CCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcC-
Confidence 35555555555 45677889999999544444433 2468999999999999876544 457999998875
Q ss_pred CCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccc-ccccccCCCCCCCccccCC
Q 014769 162 PERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEV-YGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~-~~~~~~~~~~~~~~~~~~~ 240 (419)
.++.+|+++ +++++++|++++| ||||.+.+ +++|.++|+++|+++++|.. .+...+ .. + ..++.
T Consensus 184 --~~~~~d~~~----i~~~t~~v~i~~p-n~tG~~~~---l~~i~~la~~~g~~vivd~d~~a~g~~---~~-~-~~~g~ 248 (438)
T 1wyu_A 184 --EGGRTPLPE----VGEEVGAVVVQNP-NFLGALED---LGPFAEAAHGAGALFVAVADPLSLGVL---KP-P-GAYGA 248 (438)
T ss_dssp --BTTBCCCCC----CCTTEEEEEEESS-CTTSBCCC---HHHHHHHHHHTTCEEEEECCTTGGGTB---CC-H-HHHTC
T ss_pred --cCCccCHHH----hCCCeEEEEEECC-CCCeEEec---HHHHHHHHHHcCCEEEEEechhhccCc---CC-C-ccCCC
Confidence 234677766 5667899999999 99999998 99999999999999996632 221111 11 1 22332
Q ss_pred CCcEEEEecCCCcCC----CCCceeEEEEeeCCCCccchhhHHHHH----------------------------Hhhhcc
Q 014769 241 IVPVITLGSISKRWL----VPGWRFGWLVTNDPNGIFQKSGIIDSI----------------------------KDCLSI 288 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~----~~G~r~G~~~~~~~~~~~~~~~~~~~l----------------------------~~~~~~ 288 (419)
+ +++.| +|.|+ +.|.++||+++++. +++.+ +....
T Consensus 249 D---~~~~s-~kk~~~~~~~~Gp~~G~l~~~~~--------~~~~l~~~~~g~~~~~~~~~~~~~~l~~~~~~~r~~~~- 315 (438)
T 1wyu_A 249 D---IAVGD-GQSLGLPMGFGGPHFGFLATKKA--------FVRQLPGRLVSETVDVEGRRGFILTLQAREQYIRRAKA- 315 (438)
T ss_dssp S---EEEEE-CTTTTCCCGGGCSCCEEEEECGG--------GGGGCCSCCEEEEEBTTSCEEEEECCGGGSHHHHGGGS-
T ss_pred C---EEEEC-CcccCCCccCCCCCeeEEEEcHH--------HHHhCCCceeccccccCCCcceeeeccccccccchhcc-
Confidence 2 55666 55544 45678999998752 22222 11111
Q ss_pred ccCC---chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEE--EeecCcccccCCCCH
Q 014769 289 YSDI---PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVT--MVKLNPWLLEDINDD 363 (419)
Q Consensus 289 ~~~~---~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~--~~~~~~~~~~~~~~~ 363 (419)
+... +.....++..++.....+.+++..++++++++++.+.|++++|+.+. .+. .+|. .++++ .+.
T Consensus 316 t~~~~~~~~~~a~~aa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~-~~~~~~~~~~~-------~~~ 386 (438)
T 1wyu_A 316 KSNITTNAQLTALMGAMYLAALGPEGLREVALKSVEMAHKLHALLLEVPGVRPF-TPK-PFFNEFALALP-------KDP 386 (438)
T ss_dssp SCCCCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCEEC-SCS-SBCSEEEEECS-------SCH
T ss_pred cCCccchHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEC-CCC-CeEEEEEEeCC-------CCH
Confidence 1111 22222222222333224568888899999999999999998888743 443 3332 23332 146
Q ss_pred HHHHHHHHHhcCeEe--ecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 364 IEFALKLAKEESVIV--TPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 364 ~~~~~~ll~~~gv~v--~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
.++..+|. ++||.+ .++..|. ++++|+++. .++++++++++.|++++
T Consensus 387 ~~~~~~L~-~~gi~v~~~~~~~~~-~~~lRis~~~~~t~edi~~~~~~l~~~l 437 (438)
T 1wyu_A 387 EAVRRALA-ERGFHGATPVPREYG-ENLALFAATELHEEEDLLALREALKEVL 437 (438)
T ss_dssp HHHHHHHH-HTTCCCCEECCTTSC-SSEEEEECCTTCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHH-HCCceeccccccccC-CCeEEEEecccCCHHHHHHHHHHHHHHh
Confidence 77887775 569998 6776554 789999996 68999999999998764
No 215
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.93 E-value=6.7e-25 Score=211.93 Aligned_cols=297 Identities=13% Similarity=0.095 Sum_probs=202.1
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH-HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCK-QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP 162 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~-~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~ 162 (419)
..++.+.+.+++.+.+|.. ++ +++|+|++ .++..++.++.. +|+.|++++++|+.+...++..|++++.+++.+
T Consensus 131 ~~~~~~~~~~~la~~~g~~--~~-~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~~~~~~~G~~~~~v~~~~ 207 (456)
T 2z67_A 131 MYALTNKILESFFKQLGLN--VH-AIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPIKAVSFVGMNMRLVETVL 207 (456)
T ss_dssp HHHHHHHHHHHHHHHTTCC--CE-EEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHTTCEEEEECCEE
T ss_pred HHHHHHHHHHHHHHHcCCC--CC-EEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHHHHHHHcCCCceEEEEec
Confidence 3456666666666666643 44 99999999 466555555443 678899999999999999999999999888643
Q ss_pred -CCCcccChHHHHHhh-c----CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCcc
Q 014769 163 -ERNWEVDLDAVEALA-D----KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMG 236 (419)
Q Consensus 163 -~~~~~~~~~~l~~~~-~----~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 236 (419)
+.++.+|+++|++++ + .++.+|++++|+||||.+.| +++|.++|+++|+++++|++|+.+.++. ......
T Consensus 208 ~~~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~---l~~I~~la~~~g~~v~vD~A~~~~~~g~-~~~~~~ 283 (456)
T 2z67_A 208 DGDRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDD---IVEIAKICENYDIPHIINGAYAIQNNYY-LEKLKK 283 (456)
T ss_dssp ETTEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHH-HHHHHH
T ss_pred cCCCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCC---HHHHHHHHHHcCCcEEEECcchHHHHHh-hHHHHH
Confidence 356789999999998 4 35667778999999999988 8999999999999999999998654321 000111
Q ss_pred ccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccc-cCCchHHHHHHHHHHcccchHHHHHH
Q 014769 237 LFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIY-SDIPTFIQGAIPQILEKTKEDFFCKL 315 (419)
Q Consensus 237 ~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~~ 315 (419)
.+.. ...+++.|++|. +..+.++||++++++ ++++.+....... ...+...+.++...+. .+.+++.
T Consensus 284 ~~~~-~~D~~~~s~hK~-~~~p~g~G~l~~~~~-------~~~~~l~~~~~g~~~~~~~~~~~aal~~l~---~~~~~~~ 351 (456)
T 2z67_A 284 AFKY-RVDAVVSSSDKN-LLTPIGGGLVYSTDA-------EFIKEISLSYPGRASATPVVNTLVSLLSMG---SKNYLEL 351 (456)
T ss_dssp HHTS-CCSEEEEEHHHH-HCCCSSCEEEEESCH-------HHHHHHHTTSCSCBCSHHHHHHHHHHHHHH---HHHHHHH
T ss_pred hhCC-CCCEEEEcCCCC-cCCCCCeEEEEEcCH-------HHHhhcCcCCCCCCCCCHHHHHHHHHHHHH---HHHHHHH
Confidence 1111 112567899997 455688999999542 4666664322111 1112333444333332 4667888
Q ss_pred HHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeec--CcccccCCCCHHHHHHHHHHhcCe---Eee------cC
Q 014769 316 IDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKL--NPWLLEDINDDIEFALKLAKEESV---IVT------PG 381 (419)
Q Consensus 316 ~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~--~~~~~~~~~~~~~~~~~ll~~~gv---~v~------~g 381 (419)
.++..++++++.+.|++++ ++. +..|. .++++.+ +. ...++...|. ++|| .+. +|
T Consensus 352 ~~~~~~~~~~l~~~L~~~~~~~g~~-v~~~~--~~v~~~~~~~~-------~~~~l~~~L~-~~gi~~~rv~~~~g~f~G 420 (456)
T 2z67_A 352 VKNQKNSKKLLDELLNDLSKKTGGK-FLDVE--SPIASCISVNS-------DPVEIAAKLY-NLRVTGPRGIKKTDHFGN 420 (456)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSCC-BCCCC--CSSEEEEECSS-------CHHHHHHHHH-HTTEESCEEECTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccCCE-ecCCC--CeEEEEEeccc-------HHHHHHHHHH-HcCCCcceEEeecCcccc
Confidence 8999999999999998875 666 43555 3445555 31 1356766664 4564 443 23
Q ss_pred CCCCC--CCeEEEEee--cCHHHHHHHHHHHHHHH
Q 014769 382 IYVGL--KNWLRIAFC--AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 382 ~~~~~--~~~~Ris~~--~~~~~l~~~l~~l~~~~ 412 (419)
..+.. .+++|++++ .+++++++++++|++++
T Consensus 421 ~~~~~~~~~~vr~s~~~~~t~eeid~~l~~L~~~~ 455 (456)
T 2z67_A 421 CYLGTYTHDYIVMNAAIGVRTEDIVNSVSKLEKIL 455 (456)
T ss_dssp TCSSCCSCCEEEEECCTTCCHHHHHHHHHHHHTC-
T ss_pred ccccccCcchhhhhhhcCCCHHHHHHHHHHHHHHh
Confidence 33322 479999985 68999999999998754
No 216
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.88 E-value=8.7e-28 Score=229.99 Aligned_cols=339 Identities=13% Similarity=0.036 Sum_probs=223.6
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
..+|+.+|||..|.....- -..+|.+.+++.+++.......|+. ....+|.+.|++++ + ..+.+++++|++
T Consensus 96 D~dG~~yiD~~~~~~~~~l-Gh~~p~V~~Av~~q~~~~~~~~~~~-~~~~~Lae~L~~~~------p-~~~~v~~~nSGs 166 (465)
T 2yky_A 96 DVDGHAYVNFLGEYTAGLF-GHSHPVIRAAVERALAVGLNLSTQT-ENEALFAEAVCDRF------P-SIDLVRFTNSGT 166 (465)
Confidence 3458899999998643211 1257899999999887654334443 34567777777765 2 457899999999
Q ss_pred HHHHHHHHHhc--CCCCeEEeeCCCCCCcHHHHh----hcCCEEEEEeccCCCCcccChHHHHHhhc---CCccEEEEeC
Q 014769 118 QAVEVILSVLA--RPGANVLLPRPGWPYYEGIAQ----RKQVEVRHFDLLPERNWEVDLDAVEALAD---KNTAAMVIIN 188 (419)
Q Consensus 118 ~al~~~~~~l~--~~gd~vlv~~p~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~v~i~~ 188 (419)
+|+..+++.+. ..++.|++.+++|+++...+. ..|+....+.++ + -|++.|+++++ +++++|++..
T Consensus 167 eA~~~Aik~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~----~-~d~~~l~~~l~~~~~~~aavi~ep 241 (465)
T 2yky_A 167 EANLMALATATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGV----Y-NDVEGTADLLKRHGHDCAAILVEP 241 (465)
Confidence 99999998764 245999999999987654333 122211111111 1 26788888887 4555555544
Q ss_pred CCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 189 PGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 189 p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
.++++|.+ .+.+++++|.++|+++|+++|+||+|. +.. +. ......++. ...+.||||.++. |+|+||++++
T Consensus 242 v~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~-~r~-g~-~~a~~~~gv---~pDi~t~sK~lg~-G~piG~v~~~ 314 (465)
T 2yky_A 242 MLGAGGCVPAERAFLDLLRAEASRCGALLIFDEVMT-SRL-SG-GGAQEMLGI---SADLTTLGKYIGG-GMSFGAFGGR 314 (465)
Confidence 35669964 568999999999999999999999999 633 22 111222221 1234489999765 9999999987
Q ss_pred CCCCccchhhHHHHHHh------hhccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCC---CCCC
Q 014769 268 DPNGIFQKSGIIDSIKD------CLSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIP---CISC 338 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~------~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~---~~~~ 338 (419)
+ ++++.+.. ....+++.+++++.++.++|+.... +...++++++.+++++.|+++. ++.
T Consensus 315 ~--------~i~~~l~~~~~g~~~~~~T~~~npla~aAa~aaL~~l~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~- 382 (465)
T 2yky_A 315 R--------DLMERFDPARDGAFAHAGTFNNNILTMSAGHAALTQIYT---RQAASDLSASGDRFRANLNRIAVENQAP- 382 (465)
Confidence 6 46666654 1233567788888888888875322 2345556666666666665531 222
Q ss_pred CCCCCceEEEEeecCccccc--------CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHHH
Q 014769 339 PNKPEGSMVTMVKLNPWLLE--------DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMKA 410 (419)
Q Consensus 339 ~~~p~~g~~~~~~~~~~~~~--------~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~~ 410 (419)
...+..|.++++.++..... .......+...++ ++||++.|+. |.. +++..++++|++++++|++
T Consensus 383 ~~v~g~G~~~~i~~~~~~~~~~~~~~~~d~~~~~~~~~~ll-~~GV~v~p~~-~~~-----~s~~~t~edid~~l~~l~~ 455 (465)
T 2yky_A 383 LQFTGLGSLGTIHFSRAPIRSAGDVRAADQQLKELFFFHML-RKGIYLAPRG-MYA-----LSLEIADAGRDAFAEALAD 455 (465)
Confidence 22455677888877531100 0001345666665 6799999876 321 6777899999999999999
Q ss_pred HHHHHh
Q 014769 411 FCQRHT 416 (419)
Q Consensus 411 ~~~~~~ 416 (419)
+++++.
T Consensus 456 ~l~~~~ 461 (465)
T 2yky_A 456 FIGEQR 461 (465)
Confidence 987753
No 217
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.93 E-value=5.7e-25 Score=213.06 Aligned_cols=340 Identities=10% Similarity=-0.007 Sum_probs=218.9
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCC---CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSG---KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~---~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
+|+.+|||..|...... ...+|.+.+++.+++... ....|+. ....++++.+++.+.+..+ .+.++|++++|+
T Consensus 61 dG~~ylD~~~g~~~~~l-Gh~~p~v~~A~~~~~~~~~~~~~~~~~~-~~~~~l~~~la~~l~~~~~--~~~~~v~f~~sG 136 (472)
T 1ohv_A 61 DGNRMLDLYSQISSIPI-GYSHPALVKLVQQPQNVSTFINRPALGI-LPPENFVEKLRESLLSVAP--KGMSQLITMACG 136 (472)
T ss_dssp TSCEEEESSHHHHTCSS-CBTCHHHHHHHHCGGGHHHHHCCCCTTT-SCBTTHHHHHHHTGGGGCC--TTCCEEEEESSH
T ss_pred CCCEEEECCCCHhhccc-CCCCHHHHHHHHHHHhhccccccccccc-ccHHHHHHHHHHHHHHhCC--CCcCEEEEeCCc
Confidence 47889999988654321 125899999998875321 1113443 3456899999997766443 356799999999
Q ss_pred HHHHHHHHHHhc--------C-----------------CC---CeEEeeCCCCCCcHHHHhhc-CC--------EE---E
Q 014769 117 KQAVEVILSVLA--------R-----------------PG---ANVLLPRPGWPYYEGIAQRK-QV--------EV---R 156 (419)
Q Consensus 117 ~~al~~~~~~l~--------~-----------------~g---d~vlv~~p~~~~~~~~~~~~-g~--------~~---~ 156 (419)
++|++.+++.+. . +| +.|++.+++|+++...+... |. .. .
T Consensus 137 seA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~yHg~~~~~~~~~g~~~~~~~~~~~~~~~ 216 (472)
T 1ohv_A 137 SCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAFHGRTMGCLATTHSKAIHKIDIPSFDWP 216 (472)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCCCCSSHHHHHHCCSCHHHHTTSCCCCCC
T ss_pred hhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCcccccHHHHhcCCCccccccCCCCCCCc
Confidence 999999998873 1 45 89999999999875544322 21 11 1
Q ss_pred EEeccCCC-C------c-----ccChHHHHHhhcC------CccEEEEeCCCCcccc-CCCHHHHHHHHHHHHhCCCeEE
Q 014769 157 HFDLLPER-N------W-----EVDLDAVEALADK------NTAAMVIINPGNPCGN-VFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 157 ~~~~~~~~-~------~-----~~~~~~l~~~~~~------~~~~v~i~~p~nptG~-~~~~~~l~~i~~~~~~~~~~li 217 (419)
.+++.... . + ..|++.|++++++ ++++|++...+|++|. ..+.+++++|.++|+++|+++|
T Consensus 217 ~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~~~G~~~~~~~~l~~l~~l~~~~g~lli 296 (472)
T 1ohv_A 217 IAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQSEGGDNHASDDFFRKLRDISRKHGCAFL 296 (472)
T ss_dssp EECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBCTTTCBCCCHHHHHHHHHHHHHTTCEEE
T ss_pred ccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcCCCCCCCCCHHHHHHHHHHHHHhCCEEE
Confidence 11221000 0 0 1257888888865 5555555555788996 5789999999999999999999
Q ss_pred EcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh-hccccCCchHH
Q 014769 218 ADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC-LSIYSDIPTFI 296 (419)
Q Consensus 218 ~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~ 296 (419)
+||+|.++.+.|.. ..+..++.. ..+.+.||||.+ +.| ||++ +. ++. .+... ...+++.++++
T Consensus 297 ~DEv~~g~g~~g~~-~~~~~~gv~-~~~Di~t~sK~~-l~G---G~~~-~~--------~~~-~~~~~~~~~T~~~~~~~ 360 (472)
T 1ohv_A 297 VDEVQTGGGSTGKF-WAHEHWGLD-DPADVMTFSKKM-MTG---GFFH-KE--------EFR-PNAPYRIFNTWLGDPSK 360 (472)
T ss_dssp EECTTTTTTTTSSS-SGGGGGCCS-SCCSEEEECGGG-SSE---EEEE-CG--------GGS-CSSSSSSCCSSSSCHHH
T ss_pred EeCcccCCCCCCCc-hhccccCCC-CCCCEEEEcccc-ccC---CccC-ch--------hhc-ccccccccCccCccHHH
Confidence 99999976655431 122222211 001133889985 445 7776 32 121 11111 12245668888
Q ss_pred HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcC----CC-CCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHH
Q 014769 297 QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEI----PC-ISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLA 371 (419)
Q Consensus 297 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----~~-~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll 371 (419)
+.++.++|+.... +...++++++++++.+.|+++ |+ +. ...+. |.++++.++.. .+...++.+|+
T Consensus 361 ~aaa~aal~~~~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~v~-~~~~~-g~~~~~~~~~~-----~~~~~~~~~l~ 430 (472)
T 1ohv_A 361 NLLLAEVINIIKR---EDLLSNAAHAGKVLLTGLLDLQARYPQFIS-RVRGR-GTFCSFDTPDE-----SIRNKLISIAR 430 (472)
T ss_dssp HHHHHHHHHHHHH---TTHHHHHHHHHHHHHHHHHHHHHHCTTTCE-EEEEE-TTEEEEECSSH-----HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh---CCHHHHHHHHHHHHHHHHHHHHhhCCCcEE-eecCC-ceEEEEEeCCh-----hHHHHHHHHHH
Confidence 8888877764221 234566666777777666543 32 22 11334 55666676531 12456777775
Q ss_pred HhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHH
Q 014769 372 KEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQR 414 (419)
Q Consensus 372 ~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~ 414 (419)
++||.+.|+. .+++|+++ ..++++|++++++|++++++
T Consensus 431 -~~Gv~~~~~g----~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~ 470 (472)
T 1ohv_A 431 -NKGVMLGGCG----DKSIRFRPTLVFRDHHAHLFLNIFSDILAD 470 (472)
T ss_dssp -HTTEECEEET----TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -HCCeEEecCC----CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 5799999863 57999977 46899999999999999875
No 218
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.93 E-value=2.9e-23 Score=198.35 Aligned_cols=290 Identities=18% Similarity=0.117 Sum_probs=190.6
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEE-e
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHF-D 159 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~-~ 159 (419)
...++++.+++++. .. ..++++++++++..++.+++++||+|+++.++|++....+ ...|.++..+ +
T Consensus 59 ~~~~l~~~la~~~g------~~--~~v~~~sGt~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 130 (421)
T 2ctz_A 59 TVDVLEKRLAALEG------GK--AALATASGHAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSR 130 (421)
T ss_dssp HHHHHHHHHHHHHT------CS--EEEEESSHHHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCT
T ss_pred HHHHHHHHHHHHhC------CC--ceEEecCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECC
Confidence 34789999999982 22 3455555699999999999899999999999998765554 6789988877 5
Q ss_pred ccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc-cccccCCCCCCCcccc
Q 014769 160 LLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY-GHLTFGSIPYTPMGLF 238 (419)
Q Consensus 160 ~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~-~~~~~~~~~~~~~~~~ 238 (419)
.+ |++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++| +.. +.+. ++ ..
T Consensus 131 ~~-------d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~---l~~i~~~a~~~g~~livD~~~~~~g-~~~~---~~-~~ 195 (421)
T 2ctz_A 131 EE-------RPEEFLALTDEKTRAWWVESIGNPALNIPD---LEALAQAAREKGVALIVDNTFGMGG-YLLR---PL-AW 195 (421)
T ss_dssp TC-------CHHHHHHHCCTTEEEEEEESSCTTTCCCCC---HHHHHHHHHHHTCEEEEECGGGGGG-TSCC---GG-GG
T ss_pred CC-------CHHHHHHhhccCCeEEEEECCCCCCCcccC---HHHHHHHHHHcCCEEEEECCccccc-ccCC---cc-cc
Confidence 42 789999999888999999999999999999 899999999999999999999 543 2222 12 22
Q ss_pred CCCCcEEEEecCCCcCCCCCceeEEEEeeCCC-Cc-cc-hhhH---------------------HHHHHh--hhccccCC
Q 014769 239 GSIVPVITLGSISKRWLVPGWRFGWLVTNDPN-GI-FQ-KSGI---------------------IDSIKD--CLSIYSDI 292 (419)
Q Consensus 239 ~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~-~~-~~-~~~~---------------------~~~l~~--~~~~~~~~ 292 (419)
+ ..+++.|+||.++.+|.++|++++.+.+ .+ .. ...+ ....+. ...+....
T Consensus 196 ~---~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~ 272 (421)
T 2ctz_A 196 G---AALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGYHGLRLTEAFGELAFIVKARVDGLRDQGQAL 272 (421)
T ss_dssp T---CSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGGTTBCHHHHHGGGHHHHHHHHTHHHHHCCCC
T ss_pred C---CeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchhhhhhhhhhcchhHHHHHHHHHHHHhcCCCC
Confidence 2 3488899999999999999998886321 11 00 0001 111110 01112233
Q ss_pred chHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-----------------CceEEEEeecCcc
Q 014769 293 PTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKP-----------------EGSMVTMVKLNPW 355 (419)
Q Consensus 293 ~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p-----------------~~g~~~~~~~~~~ 355 (419)
++...+++...++. +..+.++..++.+.+.+.|+++|++..+..| ..|..+.+.++..
T Consensus 273 ~~~~a~~~~~~l~~-----l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~~~~~~~~~~~~~~~g~ivsf~l~~~ 347 (421)
T 2ctz_A 273 GPFEAWVVLLGMET-----LSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHHPHHDRAQKYFKGKPGAVLTFGLKGG 347 (421)
T ss_dssp CHHHHHHHHHHHTT-----HHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTCTTHHHHHHHHTTCCCSEEEEEETTH
T ss_pred CHHHHHHHHcCcch-----HHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCCCCHHHHHHhccCCCceEEEEEeCCC
Confidence 44444444444433 4445566667888899999888776533222 2244555666521
Q ss_pred cccCCCCHHHHHHHHHHhcCeEeecCCCC----------------------CC-CCeEEEEeecCHHHHHHHHHHHHHHH
Q 014769 356 LLEDINDDIEFALKLAKEESVIVTPGIYV----------------------GL-KNWLRIAFCAEPSALKDGLGRMKAFC 412 (419)
Q Consensus 356 ~~~~~~~~~~~~~~ll~~~gv~v~~g~~~----------------------~~-~~~~Ris~~~~~~~l~~~l~~l~~~~ 412 (419)
. .+...++..+ +..++.++.|... +. ++.+|+|++. ++++++++.|++++
T Consensus 348 ~----~~~~~~~~~l-~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRlS~g~--e~~~~li~~l~~al 420 (421)
T 2ctz_A 348 Y----EAAKRFISRL-KLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRLSVGL--EHVEDLKAELKEAL 420 (421)
T ss_dssp H----HHHHHHHHTC-SSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEEECCS--SCHHHHHHHHHHHT
T ss_pred H----HHHHHHHHhC-CcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeCC--CCHHHHHHHHHHHh
Confidence 0 0122233332 3344444444221 11 4789999976 47778888887765
No 219
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.92 E-value=9.2e-23 Score=193.29 Aligned_cols=307 Identities=15% Similarity=0.113 Sum_probs=207.6
Q ss_pred CChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHh-------cCCC
Q 014769 59 RTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVL-------ARPG 131 (419)
Q Consensus 59 ~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l-------~~~g 131 (419)
..++.+.+++.+.+... .|.+..+..++|+++++++ +. +++++++++++++..++.++ .++|
T Consensus 12 ~~~~~~~~a~~~~~~~~---~~~~~~~~~~l~~~la~~~------~~--~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g 80 (390)
T 3b8x_A 12 TWDDLEYKAIQSVLDSK---MFTMGEYVKQYETQFAKTF------GS--KYAVMVSSGSTANLLMIAALFFTKKPRLKKG 80 (390)
T ss_dssp CCCHHHHHHHHHHHHHT---CCSSCHHHHHHHHHHHHHH------TC--SEEEEESCHHHHHHHHHHHTTSSSSCSCCTT
T ss_pred CCCHHHHHHHHHHHHcC---CCCCChHHHHHHHHHHHHH------CC--CcEEEECCHHHHHHHHHHHHHhhhhcCCCCc
Confidence 35678888998888653 3555668899999999998 32 26777778889999999998 7789
Q ss_pred CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 132 ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 132 d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
|+|+++.|+|.++...+...|.+++.++++++ ++.+|++.+++++++++++|++++ ++|...+ +++|.++|++
T Consensus 81 ~~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~---~~~i~~l~~~ 153 (390)
T 3b8x_A 81 DEIIVPAVSWSTTYYPLQQYGLRVKFVDIDIN-TLNIDIESLKEAVTDSTKAILTVN---LLGNPNN---FDEINKIIGG 153 (390)
T ss_dssp CEEEEESSSCHHHHHHHHHTTCEEEEECBCTT-TCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCC---HHHHHHHHTT
T ss_pred CEEEECCCCcHHHHHHHHHcCCEEEEEecCcc-ccCcCHHHHHHHhCcCCeEEEEEC---CccChhh---HHHHHHHHHH
Confidence 99999999999999889999999999988653 478999999999988888888874 4566566 9999999999
Q ss_pred CCCeEEEcccccccc-cCCCCCCCccccCCCCcEEEEec--CCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhcc
Q 014769 212 LRVMVVADEVYGHLT-FGSIPYTPMGLFGSIVPVITLGS--ISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI 288 (419)
Q Consensus 212 ~~~~li~De~~~~~~-~~~~~~~~~~~~~~~~~~i~~~s--~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~ 288 (419)
+|+++|+|++|+.+. +.+ ..++.... +...| .+|.+. +| +.|+++++++ ++.+.++.....
T Consensus 154 ~~~~li~D~a~~~g~~~~~------~~~g~~~~-~~~~s~~~~k~~~-~g-~gG~~~~~~~-------~l~~~~~~~~~~ 217 (390)
T 3b8x_A 154 RDIILLEDNCESMGATFNN------KCAGTFGL-MGTFSSFYSNHIA-TM-EGGCIVTDDE-------EIYHILLCIRAH 217 (390)
T ss_dssp SCCEEEEECTTCTTCEETT------EETTSSSS-EEEEECCTTSSSC-SS-SCEEEEESCH-------HHHHHHHHHTBT
T ss_pred cCCEEEEECcCcccCEECC------cccccccc-eEEEEccCCCCCc-cC-CceEEEeCCH-------HHHHHHHHHHhc
Confidence 999999999999532 221 12222111 22222 245432 23 3499888641 344444332210
Q ss_pred --------------------------------ccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCC
Q 014769 289 --------------------------------YSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCI 336 (419)
Q Consensus 289 --------------------------------~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 336 (419)
....+.+...++...+ +.+++..++.+++++++.+.|+++|++
T Consensus 218 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l-----~~l~~~~~~~~~~~~~l~~~L~~~~~~ 292 (390)
T 3b8x_A 218 GWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGIEQL-----KKLPRFISVRRKNAEYFLDKFKDHPYL 292 (390)
T ss_dssp TBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHTTCSSE
T ss_pred CCCccccccccccccccccccccccceeccccccCcCHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhcCCCCc
Confidence 0113333333332223 456777888889999999999988777
Q ss_pred CCCCCC-CceE-EEEeecCcccccCCCCHHHHHHHHHHhcCeEeecC---CCCCC----------------------CCe
Q 014769 337 SCPNKP-EGSM-VTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPG---IYVGL----------------------KNW 389 (419)
Q Consensus 337 ~~~~~p-~~g~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g---~~~~~----------------------~~~ 389 (419)
.....+ ..++ .+++.++.. ...+..++...| .++||.+.+. ..+.. .+.
T Consensus 293 ~~~~~~~~~~~~~~~i~~~~~---~~~~~~~l~~~L-~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (390)
T 3b8x_A 293 DVQQETGESSWFGFSFIIKKD---SGVIRKQLVENL-NSAGIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYLDKNG 368 (390)
T ss_dssp EECCCCSBCCCCEEEEEECTT---SCCCHHHHHHHH-HHTTBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHHHHHE
T ss_pred ccCCCCCCcccEEEEEEecCc---CcccHHHHHHHH-HHCCCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHHhcCE
Confidence 633221 2232 345555421 011456676666 6689998862 21111 135
Q ss_pred EEEEee--cCHHHHHHHHHHH
Q 014769 390 LRIAFC--AEPSALKDGLGRM 408 (419)
Q Consensus 390 ~Ris~~--~~~~~l~~~l~~l 408 (419)
+||++. .++++++.+++.|
T Consensus 369 l~l~~~~~~t~~di~~i~~~l 389 (390)
T 3b8x_A 369 LFVGNHQIELFDEIDYLREVL 389 (390)
T ss_dssp EEEECCSSCCHHHHHHHHHHT
T ss_pred EEeeCCCCCCHHHHHHHHHhh
Confidence 999994 6899999998876
No 220
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.91 E-value=1.1e-22 Score=204.13 Aligned_cols=309 Identities=13% Similarity=0.048 Sum_probs=205.1
Q ss_pred CCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH-HhhcCCEEEEEeccC
Q 014769 84 SGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI-AQRKQVEVRHFDLLP 162 (419)
Q Consensus 84 ~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~-~~~~g~~~~~~~~~~ 162 (419)
.-..++++.+|+++ +.+ ..+++++|+++++..++.+++++||.|+++.++|.++... +...|+.+++++...
T Consensus 173 ~~i~e~e~~lA~~~------gae-~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~~~~l~Ga~~v~v~~~~ 245 (730)
T 1c4k_A 173 GPAVAAEKHAARVY------NAD-KTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNSALAMAGGRPVYLQTNR 245 (730)
T ss_dssp THHHHHHHHHHHHT------TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHTTTTCCEEEEECEEE
T ss_pred HHHHHHHHHHHHHH------CCC-cEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHCCCEEEEEeCCc
Confidence 34578999999887 333 3588899999999999999999999999999999988777 788899988887643
Q ss_pred CCCc----ccChHHH-----HHhhcCC------c----cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc
Q 014769 163 ERNW----EVDLDAV-----EALADKN------T----AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223 (419)
Q Consensus 163 ~~~~----~~~~~~l-----~~~~~~~------~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 223 (419)
+ ++ .+|++.| +++++++ + +++++++| ||+|.+.+ +++|+++|+++++++++|++|+
T Consensus 246 ~-~~~i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~d---l~~I~~la~~~g~~livDeAh~ 320 (730)
T 1c4k_A 246 N-PYGFIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYN---AHEVVKRIGHLCDYIEFDSAWV 320 (730)
T ss_dssp C-TTCCEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEEC---HHHHHHHHGGGBSEEEEECTTC
T ss_pred c-ccCccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecC---HHHHHHHHHHcCCeEEEEcccc
Confidence 2 22 3688888 8888765 4 78899998 58999998 8999999999999999999997
Q ss_pred cc-ccCCCC--CCCcc--ccCC-CCcEEEEecCCCcCCCCCcee-EEEEeeCCCC-----ccchhhHHHHHHhhh--ccc
Q 014769 224 HL-TFGSIP--YTPMG--LFGS-IVPVITLGSISKRWLVPGWRF-GWLVTNDPNG-----IFQKSGIIDSIKDCL--SIY 289 (419)
Q Consensus 224 ~~-~~~~~~--~~~~~--~~~~-~~~~i~~~s~sK~~~~~G~r~-G~~~~~~~~~-----~~~~~~~~~~l~~~~--~~~ 289 (419)
.. .+++.. ..++. .++. +.+++++.|+||. ++|++. |+++++++.. ... ...++... ..+
T Consensus 321 ~~~~f~~~~~g~~~l~~~~~g~D~~~~iv~~S~hK~--L~g~~~gg~I~v~~~~l~g~~~~i~----~~~~~~~~~~~~s 394 (730)
T 1c4k_A 321 GYEQFIPMMRNSSPLLIDDLGPEDPGIIVVQSVHKQ--QAGFSQTSQIHKKDSHIKGQLRYCD----HKHFNNSFNLFMS 394 (730)
T ss_dssp CGGGSSGGGGGGCTTSCCCCCTTSCEEEEEECHHHH--SSCCTTCEEEEEECGGGTTSTTCCC----HHHHHHHHHHHSC
T ss_pred cccccCcccCCcCcccccccCCCCCCEEEEECCCCC--CCCCCCEEEEEecchhhcCcccccC----HHHHHHHHHHhCC
Confidence 43 343211 11221 1222 3457999999998 455554 5665554320 111 11222221 123
Q ss_pred cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhc-CCCCCCCCCCC-------------------------
Q 014769 290 SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKE-IPCISCPNKPE------------------------- 343 (419)
Q Consensus 290 ~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~p~------------------------- 343 (419)
.+++.....++..++.....+...+..+++.++.+.+++.|++ ++++.++ .|.
T Consensus 395 tsp~~~~iaal~aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~~i~g~~v~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 473 (730)
T 1c4k_A 395 TSPFYPMYAALDVNAAMQEGEAGRKLWHDLLITTIEARKKLIKAGSMFRPF-VPPVVNGKKWEDGDTEDMANNIDYWRFE 473 (730)
T ss_dssp SSCCHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHTTCSSEES-SCSEETTEEGGGSCHHHHTTCGGGGBCC
T ss_pred CCCcHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHhhhCCCeEEc-cccccccccccccccccccccchhhccC
Confidence 4556555555544444322223345566777788888888877 6676633 221
Q ss_pred ------------ce-EE-----EEeecCcc-----ccc-CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecC
Q 014769 344 ------------GS-MV-----TMVKLNPW-----LLE-DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAE 397 (419)
Q Consensus 344 ------------~g-~~-----~~~~~~~~-----~~~-~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~ 397 (419)
.+ ++ +.+..+.. .+. ...+..++...| .++||.+.... ...+|+++ +.+
T Consensus 474 ~~~~~~g~~~~~~~~~~idp~kv~i~~pg~~~~~g~~~~~g~~~~~l~~~L-~e~GI~v~~~~----~~~ir~~~s~g~t 548 (730)
T 1c4k_A 474 KGAKWHAYEGYGDNQYYVDPNKFMLTTPGINPETGDYEDFGVPATIVANYL-RDHGIIPEKSD----LNSILFLMTPAET 548 (730)
T ss_dssp TTCTTTCCTTCCTTCEEECTTEEEEECSSEETTTTEECSSCCCHHHHHHHH-HHTTCCCSEEC----SSEEEEECCTTCC
T ss_pred ccchhccccccCCcccccCCeEEEEEeCCcccccccccccCCCHHHHHHHH-HHCCcEEEECC----CCeEEEEeCCCCC
Confidence 11 11 34444310 000 012456666666 56699886532 46789888 468
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q 014769 398 PSALKDGLGRMKAFCQRHT 416 (419)
Q Consensus 398 ~~~l~~~l~~l~~~~~~~~ 416 (419)
+++++.+++.|.++.+.+.
T Consensus 549 ~e~i~~Ll~aL~~i~~~~~ 567 (730)
T 1c4k_A 549 PAKMNNLITQLLQLQRLIE 567 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 8999999999999987764
No 221
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.91 E-value=9.3e-23 Score=192.69 Aligned_cols=270 Identities=17% Similarity=0.170 Sum_probs=187.1
Q ss_pred HHHHHHHHHHHhC----C--CCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCC
Q 014769 62 VEAEDAIVDAVRS----G--KFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 62 ~~v~~a~~~~~~~----~--~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd 132 (419)
..+.+++.+.... + ....|+. .|..+|++.+|+++ + .+..++ ++|+++++..++.+++++||
T Consensus 32 ~~vl~a~~~~~~~~~~~~~~~~~~y~~-~~~~~Le~~lA~l~------g--~e~alv~p~~~sGt~Ai~~al~all~~GD 102 (409)
T 3jzl_A 32 AKVLDAFQENKVSDFHFHPSTGYGYDD-EGRDTLERVYATVF------K--TEAALVRPQIISGTHAISTVLFGILRPDD 102 (409)
T ss_dssp HHHHHHHHHTTCCGGGGCCCCTTCTTC-HHHHHHHHHHHHHH------T--CSEEEEETTSCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhhhhhhccCCCcCCCCCh-hHHHHHHHHHHHHh------C--CCcEEEECCCccHHHHHHHHHHHhcCCCC
Confidence 4566777664311 1 1224555 35688999999988 2 244555 88999999999999999999
Q ss_pred eEEeeC-CCCCCcHH----------HHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeC----CCCccccCC
Q 014769 133 NVLLPR-PGWPYYEG----------IAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIIN----PGNPCGNVF 197 (419)
Q Consensus 133 ~vlv~~-p~~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~----p~nptG~~~ 197 (419)
+|+++. |.|..+.. .++..|.+++.+++++ ++.+|++.+++++++++++|++++ |+||||.+.
T Consensus 103 ~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v~~~~--~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~ 180 (409)
T 3jzl_A 103 ELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLE--NGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIE 180 (409)
T ss_dssp EEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEECCCCT--TSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHH
T ss_pred EEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEeCCCC--CCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccc
Confidence 999998 99998763 4466788888887653 467999999999998899999999 999999875
Q ss_pred CHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccc
Q 014769 198 TYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQ 274 (419)
Q Consensus 198 ~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~ 274 (419)
+ +++|+++|++ +|+++++|++|+.+.+...+ . ..+. .++++|+||.++.+| ...||++++.
T Consensus 181 ~---l~~I~~la~~~~~~~~livD~a~~~~~~~~~p---~-~~g~---Div~~S~sK~lgg~~~~~GG~v~~~~------ 244 (409)
T 3jzl_A 181 K---IKEMIVFVKNINPEVIVFVDNCYGEFVEYQEP---P-EVGA---DIIAGSLIKNPGGGLAKTGGYIAGKE------ 244 (409)
T ss_dssp H---HHHHHHHHHHHCTTCEEEEECTTCTTTSSCCS---G-GGTC---SEEEEETTSGGGTTTCSSCEEEEECH------
T ss_pred c---HHHHHHHHHhhCCCCEEEEeCCcccccccCCc---c-ccCC---eEEEECccccCCccCCceEEEEEeCH------
Confidence 5 9999999999 99999999999876543221 1 2222 388999999987766 4569998864
Q ss_pred hhhHHHHHHhhhc-----cccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc-----
Q 014769 275 KSGIIDSIKDCLS-----IYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG----- 344 (419)
Q Consensus 275 ~~~~~~~l~~~~~-----~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~----- 344 (419)
++++.++.... ...++......++...+. ....+.++..+++..+.+.|+++ ++. + .|..
T Consensus 245 --~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~-----~~~~r~~~~~~~a~~la~~L~~~-g~~-v-~p~~~~~~~ 314 (409)
T 3jzl_A 245 --ALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFF-----LAPHVTAQAIKGARFTAAMLAEF-GVE-A-DPVWDAPRT 314 (409)
T ss_dssp --HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTSCCS
T ss_pred --HHHHHHHHHhccccccccccccHHHHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHHhC-CCc-c-cCCCCCCCc
Confidence 67887776421 112222211233333332 34556777888899999999987 555 3 2222
Q ss_pred eEEEEeecCcccccCCCCHHHHHHHHHHhc
Q 014769 345 SMVTMVKLNPWLLEDINDDIEFALKLAKEE 374 (419)
Q Consensus 345 g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~ 374 (419)
...+.+.++.. .....+++.| ++.
T Consensus 315 ~~i~~i~l~~~-----~~~~~~~~~L-~~~ 338 (409)
T 3jzl_A 315 DLIQSVSFHNK-----EKMVAFAQAI-QAA 338 (409)
T ss_dssp SSCCEEECSCH-----HHHHHHHHHH-HHT
T ss_pred cEEEEEEeCCH-----HHHHHHHHHH-Hhc
Confidence 22445556421 1345666666 444
No 222
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.90 E-value=1.9e-22 Score=191.07 Aligned_cols=266 Identities=16% Similarity=0.148 Sum_probs=184.3
Q ss_pred HHHHHHHHHHHhC------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCC
Q 014769 62 VEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 62 ~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd 132 (419)
+.+.+++.+.... .....|+.. |..+|++.+++++ + .+..++ ++|+++|+..++.++++|||
T Consensus 47 ~~Vl~a~~~~~~~~~~~~~~~gy~Y~~~-g~~~Le~~lA~l~------g--~e~alv~p~~~sGt~A~~~al~all~pGD 117 (427)
T 3hvy_A 47 LKVLKAFQEERISESHFTNSSGYGYNDI-GRDSLDRVYANIF------N--TESAFVRPHFVNGTHAIGAALFGNLRPND 117 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTCH-HHHHHHHHHHHHH------T--CSEEEEETTCCSHHHHHHHHHHHTCCTTC
T ss_pred HHHHHHHHHHHHHHHhcccCcCCCCCch-hHHHHHHHHHHHh------C--CCceEEeCCCCcHHHHHHHHHHHhcCCCC
Confidence 5677777664321 112345553 6788999999988 2 344466 78899999999999999999
Q ss_pred eEEeeC-CCCCCcH-----------HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeC----CCCccc
Q 014769 133 NVLLPR-PGWPYYE-----------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIIN----PGNPCG 194 (419)
Q Consensus 133 ~vlv~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG 194 (419)
+|++++ |.|.++. ..++..|++++.+++ .++.+|++.++++++ +++++|++++ |+||||
T Consensus 118 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~---~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg 194 (427)
T 3hvy_A 118 TMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKMVDL---KDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSL 194 (427)
T ss_dssp EEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEECCC---BTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCC
T ss_pred EEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEEecC---CCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccc
Confidence 999999 9998775 345667888888876 346799999999998 7899999999 999998
Q ss_pred cCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCC
Q 014769 195 NVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNG 271 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~ 271 (419)
.+. ++++|+++|++ +|+++++|++|+.+.+...+ + ..+. .++++|+||.++.+| .+.||++++.
T Consensus 195 ~v~---dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p---~-~~ga---Div~~S~sK~lgg~g~~~GG~i~~~~--- 261 (427)
T 3hvy_A 195 RIA---EIAEIIKSIREVNENVIVFVDNCYGEFVEEKEP---T-DVGA---DIIAGSLIKNIGGGIATTGGYIAGKE--- 261 (427)
T ss_dssp CHH---HHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCG---G-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred cHH---HHHHHHHHHHHhCCCCEEEEECCccccccCCCC---c-ccCC---eEEEECCcccccccccceEEEEEECH---
Confidence 765 49999999999 89999999999876543221 1 2222 388999999987655 5679998864
Q ss_pred ccchhhHHHHHHhhhc---cc--cCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCc--
Q 014769 272 IFQKSGIIDSIKDCLS---IY--SDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEG-- 344 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~---~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~-- 344 (419)
++++.++.... .. .+++......+...+ .....+.++..+++..+.+.|+++ ++. + .|..
T Consensus 262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3hvy_A 262 -----EYVTQATFRVTVPGIGGECGSTFGVMRSLYEGL-----FMAPHVTIEAVKGAVFCARIMELA-GFD-V-LPKYND 328 (427)
T ss_dssp -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred -----HHHHHHHHHhhcCCcccccCCCHHHHHHHHHhH-----hHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 68888876431 11 112111123333333 224456677888888999999887 455 3 2322
Q ss_pred ---eEEEEeecCcccccCCCCHHHHHHHH
Q 014769 345 ---SMVTMVKLNPWLLEDINDDIEFALKL 370 (419)
Q Consensus 345 ---g~~~~~~~~~~~~~~~~~~~~~~~~l 370 (419)
...+.+.+... ....++++.+
T Consensus 329 ~~~~li~~~~l~~~-----~~~~~f~~~l 352 (427)
T 3hvy_A 329 KRTDIIQAIKFNDE-----KKLIDFIKGI 352 (427)
T ss_dssp CCSSSEEEEECSSH-----HHHHHHHHHH
T ss_pred CCceEEEEEeCCCH-----HHHHHHHHHh
Confidence 22556666421 1234566665
No 223
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.90 E-value=2.1e-22 Score=190.80 Aligned_cols=267 Identities=16% Similarity=0.151 Sum_probs=184.2
Q ss_pred HHHHHHHHHHHhC------CCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEE---cccHHHHHHHHHHHhcCCCC
Q 014769 62 VEAEDAIVDAVRS------GKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYV---TLGCKQAVEVILSVLARPGA 132 (419)
Q Consensus 62 ~~v~~a~~~~~~~------~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~---t~g~~~al~~~~~~l~~~gd 132 (419)
+.+++++.+.... .....|+. .|..+|++.+++++ +. +..++ ++|+++++..++.++++|||
T Consensus 46 ~~Vl~A~~~~~~~~~~~~~~~gy~y~~-~~~~~Le~~lA~l~------g~--e~alv~p~~~sGt~Ai~~al~all~pGD 116 (427)
T 3i16_A 46 LKVLNAFQEERISEAHFTNSSGYGYGD-IGRDSLDAVYARVF------NT--ESALVRPHFVNGTHALGAALFGNLRPGN 116 (427)
T ss_dssp HHHHHHHHHTTCCGGGSCCCCTTCTTC-HHHHHHHHHHHHHH------TC--SEEEEETTCCSHHHHHHHHHHHHCCTTC
T ss_pred HHHHHHHHHhchhHHhcCCCCCCCCCH-HHHHHHHHHHHHHh------CC--cceEEeCCCccHHHHHHHHHHHHhCCCC
Confidence 4566666654211 11123554 36788999999988 33 33355 88889999999999999999
Q ss_pred eEEeeC-CCCCCcH-----------HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc--CCccEEEEeC----CCCccc
Q 014769 133 NVLLPR-PGWPYYE-----------GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--KNTAAMVIIN----PGNPCG 194 (419)
Q Consensus 133 ~vlv~~-p~~~~~~-----------~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~v~i~~----p~nptG 194 (419)
+|++++ |.|.++. ..++..|++++.+++++ ++.+|++.++++++ +++++|++++ |+||||
T Consensus 117 ~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~--~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg 194 (427)
T 3i16_A 117 TMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKE--DGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRAL 194 (427)
T ss_dssp EEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCT--TSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCC
T ss_pred EEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCcc--CCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcc
Confidence 999999 9998776 34566788888887653 34689999999998 7899999999 999998
Q ss_pred cCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCC
Q 014769 195 NVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNG 271 (419)
Q Consensus 195 ~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~ 271 (419)
.+. ++++|+++|++ +|+++++|++|..+.+...+ . ..+. .++++|+||.++.+| .+.||++++.
T Consensus 195 ~i~---dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p---~-~~ga---Div~~S~sK~lgg~g~~~gG~i~~~~--- 261 (427)
T 3i16_A 195 LIE---DIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEP---T-DVGA---DLIAGSLIKNIGGGIAPTGGYLAGTK--- 261 (427)
T ss_dssp CHH---HHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCG---G-GGTC---SEEEEETTSGGGTTTCCSCEEEEECH---
T ss_pred cHH---HHHHHHHHHHHhCCCCEEEEECCCccccccCCc---c-ccCC---eEEEecCcccCCCCCCceEEEEEECH---
Confidence 775 49999999999 99999999999876543221 1 2222 388999999987766 6789999865
Q ss_pred ccchhhHHHHHHhhhc---cccCCch-HH-HHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCce-
Q 014769 272 IFQKSGIIDSIKDCLS---IYSDIPT-FI-QGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGS- 345 (419)
Q Consensus 272 ~~~~~~~~~~l~~~~~---~~~~~~~-~~-~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g- 345 (419)
++++.++.... ......+ .. ...+...+ ..+..+.++..+++..+.+.|+++ ++. + .|..+
T Consensus 262 -----~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl-----~~~~~r~~~~~~~a~~la~~L~~~-g~~-V-~p~~~~ 328 (427)
T 3i16_A 262 -----DCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGL-----FLAPHISMEALKGAILCSRIMELA-GFE-V-MPKYDE 328 (427)
T ss_dssp -----HHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHT-TCE-E-ESCTTS
T ss_pred -----HHHHHHHHhcccCccCccCCccHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHhC-CCe-e-cCCCCC
Confidence 68888876421 1111111 11 22222222 335566778888889999999987 455 3 33222
Q ss_pred ----EEEEeecCcccccCCCCHHHHHHHH
Q 014769 346 ----MVTMVKLNPWLLEDINDDIEFALKL 370 (419)
Q Consensus 346 ----~~~~~~~~~~~~~~~~~~~~~~~~l 370 (419)
..+.+.+... .....|++.|
T Consensus 329 ~~~~~i~~i~l~~~-----~~~~~f~~~l 352 (427)
T 3i16_A 329 KRSDIIQSIKFNDK-----DKLIEFCKGI 352 (427)
T ss_dssp CCSSSCEEEECSSH-----HHHHHHHHHH
T ss_pred CCccEEEEEEECCH-----HHHHHHHHHH
Confidence 2555666421 1244666666
No 224
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.90 E-value=3.1e-22 Score=190.68 Aligned_cols=255 Identities=16% Similarity=0.185 Sum_probs=173.1
Q ss_pred HHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC-CCCCCcHHHH----------hhcCCEEEE
Q 014769 89 ARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPR-PGWPYYEGIA----------QRKQVEVRH 157 (419)
Q Consensus 89 lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~-p~~~~~~~~~----------~~~g~~~~~ 157 (419)
.++.+.+.+.+.+|......+++++ |+++|+..++.+++++||+|+++. |.|..+...+ +..|.+++.
T Consensus 66 ~~~~l~~~la~~~g~~~~~~~i~~~-sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 66 GRDTLEKVYADVFGAEAGLVRPQII-SGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHHTTCSEECCBTTSC-SHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred hHHHHHHHHHHHhCCCcccccceee-CHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 3555555555545543322333455 668999999999999999999998 9999877544 457889888
Q ss_pred EeccCCCCcccChHHHHHhhcCCccEEEEe-CCCCccccCCCHHHHHHHHHHHHh--CCCeEEEcccccccccCCCCCCC
Q 014769 158 FDLLPERNWEVDLDAVEALADKNTAAMVII-NPGNPCGNVFTYHHLQEIAEMARK--LRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 158 ~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~-~p~nptG~~~~~~~l~~i~~~~~~--~~~~li~De~~~~~~~~~~~~~~ 234 (419)
+++++ ++.+|++.+++++++++++|+++ +|+||+|...+.+++++|+++|++ +|+++|+|++|+.+.++..+.
T Consensus 145 v~~~~--~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~-- 220 (431)
T 3ht4_A 145 VPLTE--GGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPC-- 220 (431)
T ss_dssp CCBCT--TSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGG--
T ss_pred eCCCC--CCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCcc--
Confidence 88754 46799999999999889999999 589999999999999999999999 999999999999877543321
Q ss_pred ccccCCCCcEEEEecCCCcCCC-CCceeEEEEeeCCCCccchhhHHHHHHhhhcc-----ccCCchHHHHHHHHHHcccc
Q 014769 235 MGLFGSIVPVITLGSISKRWLV-PGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSI-----YSDIPTFIQGAIPQILEKTK 308 (419)
Q Consensus 235 ~~~~~~~~~~i~~~s~sK~~~~-~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~~~~~~~a~~~~l~~~~ 308 (419)
.++. .++++|+||.++. .++..||+++++ ++++.++..... ..+++.....++...+.
T Consensus 221 --~~g~---Di~~~S~sK~lgg~~~~~GG~v~~~~--------~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~--- 284 (431)
T 3ht4_A 221 --HVGA---DLMAGSLIKNPGGGIVKTGGYIVGKE--------QYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFF--- 284 (431)
T ss_dssp --GTTC---SEEEEETTSGGGTTTCSSCEEEEECH--------HHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHH---
T ss_pred --ccCC---eEEEcCccccCCCCCCCceEEEEecH--------HHHHHHHHHhccCCcccccCccHHHHHHHHhHhh---
Confidence 2222 3889999998543 223349999865 677777664321 11121111222333332
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC---CCCCceEEEEeecCcccccCCCCHHHHHHHHHH
Q 014769 309 EDFFCKLIDTLRESAEICYDGVKEIPCISCP---NKPEGSMVTMVKLNPWLLEDINDDIEFALKLAK 372 (419)
Q Consensus 309 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~---~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~ 372 (419)
....+.++..++...+.+.|+++ ++.+. ..+..+..+.+.++.. ....+++..+..
T Consensus 285 --~~~~~~~~~~~~a~~l~~~L~~~-g~~v~p~~~~~~~~li~~i~l~~~-----~~~~~~~~~l~~ 343 (431)
T 3ht4_A 285 --LAPHVAGQALKGAIFTAAFLEKL-GMNTSPAWNAPRTDLIQSVQFDDK-----DRMIAFCQAIQY 343 (431)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHH-TCCEESCTTSCCSSSCCEEECCCH-----HHHHHHHHHHHH
T ss_pred --hHHHHHHHHHHHHHHHHHHHHhC-cCEecCCCCCCCccEEEEEEeCCH-----HHHHHHHHHHHh
Confidence 24556667778888888888876 44421 1122333555666531 124566666633
No 225
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.90 E-value=1.5e-21 Score=197.91 Aligned_cols=308 Identities=10% Similarity=-0.008 Sum_probs=197.2
Q ss_pred CHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCC
Q 014769 86 IPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERN 165 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 165 (419)
..++++.+++++ +.+ +.+++++|+++++..++.+++++||.|+++.|+|.++...+...|+.+++++...+ +
T Consensus 207 v~~~ee~la~l~------G~d-~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~~~~~G~~~v~v~~~~~-~ 278 (755)
T 2vyc_A 207 FGESEKYAARVF------GAD-RSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQGLMLTGAKPVYMVPSRN-R 278 (755)
T ss_dssp HHHHHHHHHHHH------TCS-EEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHHCCEEEEECCCBC-T
T ss_pred HHHHHHHHHHHh------CCC-ceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHcCCEEEEEeCCCC-c
Confidence 357777777776 332 45888999999999999999999999999999999988888889999998886533 2
Q ss_pred cc----c-----ChHHHHHhhcC--Ccc--------EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-
Q 014769 166 WE----V-----DLDAVEALADK--NTA--------AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL- 225 (419)
Q Consensus 166 ~~----~-----~~~~l~~~~~~--~~~--------~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~- 225 (419)
++ + |++.+++++++ +++ ++++++| ||+|.+.+ +++|+++|+++|+++++|++|+..
T Consensus 279 ~g~~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~d---l~~I~~ia~~~~~~livDeA~~~~~ 354 (755)
T 2vyc_A 279 YGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYN---AKEAQDLLEKTSDRLHFDEAWYGYA 354 (755)
T ss_dssp TSCBCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEEC---HHHHHHHHTTTCSEEEEECTTCTTG
T ss_pred cccccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecC---HHHHHHHHHHcCCEEEEECcCchhc
Confidence 22 4 89999998864 333 8899998 79999998 899999999999999999999753
Q ss_pred ccCCC--CCCCccc--cC-CCCcEEEEecCCCcCCCCCce-eEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHH
Q 014769 226 TFGSI--PYTPMGL--FG-SIVPVITLGSISKRWLVPGWR-FGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGA 299 (419)
Q Consensus 226 ~~~~~--~~~~~~~--~~-~~~~~i~~~s~sK~~~~~G~r-~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a 299 (419)
.+++. +..++.. .+ ...+++++.|+||. ++|++ .|++++++.........+.+.+.. ..+.+++.+...+
T Consensus 355 ~~~~~~~~~~~~~g~~aD~~~~~~iv~~S~hK~--L~g~~~g~~i~~~~~~~~i~~~~~~~~~~~--~~s~sp~~~~iaa 430 (755)
T 2vyc_A 355 RFNPIYADHYAMRGEPGDHNGPTVFATHSTHKL--LNALSQASYIHVREGRGAINFSRFNQAYMM--HATTSPLYAICAS 430 (755)
T ss_dssp GGCGGGTTSSSSCSCCCCCSSBEEEEEEETTTS--SSCCTTCEEEEEECCBTCCCHHHHHHHHHH--TSCSSCCHHHHHH
T ss_pred ccCcccCCcchhcCCcCCccCCCeEEEECcccc--ccCcCCeeeeeecCcccccCHHHHHHHHHH--hCCCCHHHHHHHH
Confidence 23321 1122211 12 23467899999998 45665 577777653101110112222211 1234566665555
Q ss_pred HHHHHcccchHHHHHHHHHHHHHHHHHHHHhhcCCC---------CCCCCCCC---------------------------
Q 014769 300 IPQILEKTKEDFFCKLIDTLRESAEICYDGVKEIPC---------ISCPNKPE--------------------------- 343 (419)
Q Consensus 300 ~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~---------~~~~~~p~--------------------------- 343 (419)
+..+++.......++..+++.++.+.+++.|+++++ +.++ .|.
T Consensus 431 l~aA~~~l~~~gg~~~~~~~~~~a~~~r~~L~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 509 (755)
T 2vyc_A 431 NDVAVSMMDGNSGLSLTQEVIDEAVDFRQAMARLYKEFTADGSWFFKPW-NKEVVTDPQTGKTYDFADAPTKLLTTVQDC 509 (755)
T ss_dssp HHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCEES-SCSEEECTTTCCEEEGGGSCHHHHHHCGGG
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccccccccccceeecc-Cchhccccccccccccccccchhccchhhh
Confidence 555554322222334445555555555555554433 3211 110
Q ss_pred ----------------ce------EEEEeecCcccccC-----CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--
Q 014769 344 ----------------GS------MVTMVKLNPWLLED-----INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF-- 394 (419)
Q Consensus 344 ----------------~g------~~~~~~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-- 394 (419)
.+ .-+.+.++.....+ ..+..++...| +++||.+... ....+|+.+
T Consensus 510 ~~~~~~~~~h~~~~~~~~~~~~Dp~~v~i~~~~~~~~G~~~~~g~~~~~l~~~L-~~~gI~~e~~----~~~~v~~~~~~ 584 (755)
T 2vyc_A 510 WVMHPGESWHGFKDIPDNWSMLDPIKVSILAPGMGEDGELEETGVPAALVTAWL-GRHGIVPTRT----TDFQIMFLFSM 584 (755)
T ss_dssp TBCCTTCTTTCCTTCCTTSEEECTTEEEEECSCBCTTSSBCSSCCCHHHHHHHH-HTTTCCCSEE----CSSEEEEECCT
T ss_pred hccCcccccccccccCCCccccCCeEEEEEcCCCCCCCCccccCCcHHHHHHHH-HHCCCEEeec----CCCeEEEEECC
Confidence 11 12333343211111 12345665555 7799877442 257889998
Q ss_pred ecCHHHHHHHHHHHHHHHHHH
Q 014769 395 CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 395 ~~~~~~l~~~l~~l~~~~~~~ 415 (419)
+.++++++.+++.|.++.+.+
T Consensus 585 g~t~~~~~~l~~al~~~~~~~ 605 (755)
T 2vyc_A 585 GVTRGKWGTLVNTLCSFKRHY 605 (755)
T ss_dssp TCCTTTTHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHhh
Confidence 468899999999999887765
No 226
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.90 E-value=6.1e-22 Score=184.23 Aligned_cols=327 Identities=13% Similarity=0.034 Sum_probs=219.2
Q ss_pred CCCChHHHHHHHHHHHhCCCCC---CC-----CC--CCCCHHHHHHHHHHHHhhCCCCCCC-CcEEE-cccHHHHHHHHH
Q 014769 57 CFRTAVEAEDAIVDAVRSGKFN---CY-----AT--NSGIPPARRAIADYLSRDLPYKLSA-DDVYV-TLGCKQAVEVIL 124 (419)
Q Consensus 57 ~~~~~~~v~~a~~~~~~~~~~~---~Y-----~~--~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~~-t~g~~~al~~~~ 124 (419)
..+.|+.|.+++.+.+.+...+ .+ ++ ..-+.+.|+.+++++ ++++ .+|++ |+|+|++++.++
T Consensus 21 ~~~~p~~Vl~a~~~~~~~~~~n~~s~~~~~hr~~~~~~~~~~ar~~la~ll------~~~~~~evif~t~~~T~a~n~a~ 94 (377)
T 3e77_A 21 QSMLPHSVLLEIQKELLDYKGVGISVLEMSHRSSDFAKIINNTENLVRELL------AVPDNYKVIFLQGGGCGQFSAVP 94 (377)
T ss_dssp SCCCCHHHHHHHHHTSSSGGGSSSCTTTCCTTSHHHHHHHHHHHHHHHHHH------TCCTTEEEEEESSHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHhcccCCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCCeEEEEcCchHHHHHHHH
Confidence 4678999999999877531100 00 00 112356777788887 4443 57888 689999999999
Q ss_pred HHhcCC--CCeEEeeCCCCCCc--HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHH
Q 014769 125 SVLARP--GANVLLPRPGWPYY--EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYH 200 (419)
Q Consensus 125 ~~l~~~--gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~ 200 (419)
..+..+ ||+|++..-++++. ...++..|..+..++.+ .++..+++.++..+++++++|.+++..|.||++.|.
T Consensus 95 ~~l~~~~~Gd~v~~~~~g~~~~~~~~~a~~~G~~~~~~~~~--~~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi- 171 (377)
T 3e77_A 95 LNLIGLKAGRCADYVVTGAWSAKAAEEAKKFGTINIVHPKL--GSYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF- 171 (377)
T ss_dssp HHHGGGSTTCEEEECCCSHHHHHHHHHHTTTSEEEECSCCC--SSSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-
T ss_pred HhccCCCCCCeEEEEECCHHHHHHHHHHHHhCCceEEeccC--CCcCCCCChHHhccCCCccEEEEeCccCchheEchh-
Confidence 998865 89998776666543 33455667666665543 334566677777788889999999888999999994
Q ss_pred HHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCcc---chhh
Q 014769 201 HLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIF---QKSG 277 (419)
Q Consensus 201 ~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~---~~~~ 277 (419)
+|+++|+++++|.+++. +..+..+..++ +++.|.+|.+|.+| +|++++++..... ..+.
T Consensus 172 -------i~~~~~~~~~vD~~q~~----g~~~id~~~~~-----~~~~s~~K~~gp~G--~g~l~~~~~~l~~~~~~~p~ 233 (377)
T 3e77_A 172 -------IPDVKGAVLVCDMSSNF----LSKPVDVSKFG-----VIFAGAQKNVGSAG--VTVVIVRDDLLGFALRECPS 233 (377)
T ss_dssp -------CCCCTTCCEEEECTTTT----TSSCCCGGGCS-----EEEEEGGGTTSCTT--CEEEEEETTSCSCCCTTSCG
T ss_pred -------hhccCCCEEEEEccccc----CCCCCchhhcC-----EEEEecccccCCCc--cEEEEEcHHHHhhccCCCCc
Confidence 36788999999999987 33333344333 35678999987777 7888887542100 0011
Q ss_pred HHH--HHHhhhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCCCCCC-CC--CceEEEEee
Q 014769 278 IID--SIKDCLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCISCPN-KP--EGSMVTMVK 351 (419)
Q Consensus 278 ~~~--~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~-~p--~~g~~~~~~ 351 (419)
+.+ .........++++....+++.++++..... .++.+.++.+++.+++++.|+++|++.... .+ ..+..+.+.
T Consensus 234 ~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~~~L~~~~g~~~~~~~~~~rs~~ivsf~ 313 (377)
T 3e77_A 234 VLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIYEIIDNSQGFYVCPVEPQNRSKMNIPFR 313 (377)
T ss_dssp GGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHTSTTSEECCSCGGGBCSSEEEEE
T ss_pred hhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhcCCceecCCCHHHcCCcEEEEE
Confidence 111 111111234677888888888888765445 688999999999999999999988776211 12 234445556
Q ss_pred cCcccccCCCC-HHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 352 LNPWLLEDIND-DIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 352 ~~~~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
++.... ..+ +..++..+ .++||.+.+|.. ..+.+|+|+. .++++++.+++.|+++++++
T Consensus 314 ~~~~~~--~~~~~~~~l~~l-~~~Gi~~~~g~~--~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 314 IGNAKG--DDALEKRFLDKA-LELNMLSLKGHR--SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp ESSTTC--CHHHHHHHHHHH-HHTTEESCBCCT--TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCC--chhHHHHHHHHH-HHCCcEEeCCCC--cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 653100 001 13455555 567999988753 3467999994 58999999999999998875
No 227
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.89 E-value=5.6e-22 Score=185.58 Aligned_cols=332 Identities=14% Similarity=0.034 Sum_probs=216.0
Q ss_pred CeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCC--------CCCCC--CCCCCHHHHHHHHHHHHhhCCCCCCC-CcEE
Q 014769 43 PVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGK--------FNCYA--TNSGIPPARRAIADYLSRDLPYKLSA-DDVY 111 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~--------~~~Y~--~~~g~~~lr~~ia~~l~~~~~~~~~~-~~i~ 111 (419)
+++.++.|. .+.++.|++++.+.+.+.. ....+ -..-+.+.|+.+++++ +++. .+|+
T Consensus 27 ~~yl~~agp------t~~p~~V~~a~~~~~~~~~~n~~s~~~~~h~~~~~~~~~~~ar~~la~ll------~~~~~~evi 94 (386)
T 3qm2_A 27 QVFNFSSGP------AMLPAEVLKLAQQELCDWHGLGTSVMEISHRGKEFIQVAEEAEQDFRDLL------NIPSNYKVL 94 (386)
T ss_dssp CCEECCSSS------CCCCHHHHHHHTCC-----------------------CCHHHHHHHHHHH------TCCTTEEEE
T ss_pred cCccccCCC------CCCCHHHHHHHHHHHHhccccCccccccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceEE
Confidence 345555552 3678999999876653210 00111 1356789999999999 5543 4788
Q ss_pred E-cccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc--HHHHhhcCCEEEEEecc-CCCCcccChHHHHHhhcCCccEEEEe
Q 014769 112 V-TLGCKQAVEVILSVLARPGANVLLPRPGWPYY--EGIAQRKQVEVRHFDLL-PERNWEVDLDAVEALADKNTAAMVII 187 (419)
Q Consensus 112 ~-t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~--~~~~~~~g~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~v~i~ 187 (419)
+ |+|+|++++.++..+..+||+|++..-++.+. ...++..| .+..++.+ +..+..++++.++.++++++++|.++
T Consensus 95 f~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~~~~~~a~~~G-~v~~v~~~~~~~G~~~~~~~~~~~l~~~t~lV~~~ 173 (386)
T 3qm2_A 95 FCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAASAIKEAKKYC-APQIIDAKITVDGKRAVKPMREWQLSDNAAYLHYC 173 (386)
T ss_dssp EEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHHHHHHHHTTTS-EEEEEECEEEETTEEEECCGGGCCCCTTCSCEEEC
T ss_pred EEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHHHHHHHHHHhC-CeEEEecCcccCCCCCCchHHHhhcCCCCcEEEEE
Confidence 8 69999999999999999999987655544432 33456668 88888865 12333367778888888889999999
Q ss_pred CCCCccccC-CCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 188 NPGNPCGNV-FTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 188 ~p~nptG~~-~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
+..|.||++ .| +++|. +|+++++|.+++. |..+..+..++ +.+.|.+|++|.+| +|++++
T Consensus 174 h~et~tG~~i~p---i~~i~-----~g~~~~vDa~qs~----g~~pidv~~~~-----~~~~s~hK~lGP~G--~g~l~v 234 (386)
T 3qm2_A 174 PNETIDGIAIDE---TPDFG-----PEVVVTADFSSTI----LSAPLDVSRYG-----VIYAGAQKNIGPAG--LTLVIV 234 (386)
T ss_dssp SEETTTTEECCC---CCCCC-----TTCCEEEECTTTT----TSSCCCGGGCS-----EEEEETTTTTCCTT--EEEEEE
T ss_pred CCcCCcCEecCc---hhhhc-----CCCEEEEEccccc----CCCCCCccccC-----EEEEecccccCCCc--cEEEEE
Confidence 888899996 77 55553 7999999999986 33334444442 35578999987666 888888
Q ss_pred eCCCC--cc-chhhHH--HHHHhhhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhcCCCC-CCC
Q 014769 267 NDPNG--IF-QKSGII--DSIKDCLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKEIPCI-SCP 339 (419)
Q Consensus 267 ~~~~~--~~-~~~~~~--~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~-~~~ 339 (419)
++... .. ..+.+. ..........++++.....++.++++..... .+++..++.+++++++++.|+++ ++ ...
T Consensus 235 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~gTp~v~~i~~l~~Al~~~~~~gG~~~i~~~~~~l~~~l~~~l~~~-~~~~~~ 313 (386)
T 3qm2_A 235 REDLLGKAHESCPSILDYTVLNDNDSMFNTPPTFAWYLSGLVFKWLKAQGGVAAMHKINQQKAELLYGVIDNS-DFYRND 313 (386)
T ss_dssp EGGGCSCCCTTSCGGGCHHHHHHC-------CCSHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHTC-SSEECC
T ss_pred CHHHHhhhcccCCcHHHHHHHhhcCCCCCCCcHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHC-CCcccC
Confidence 75320 00 001111 1111111223567777777777777764444 68888999999999999999987 44 211
Q ss_pred CCC--CceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHHHHHHHHHH
Q 014769 340 NKP--EGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 340 ~~p--~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~l~~~~~~~ 415 (419)
..+ .....+.+.++... -+.+++.. |.++||.+.+|... .+.+|+|+. .++++++.+++.|+++.+++
T Consensus 314 ~~~~~rs~~iv~f~~~~~~-----~~~~~~~~-L~~~gI~~~~g~~~--~~~iRiS~~~~~t~edId~l~~~l~~~~~~~ 385 (386)
T 3qm2_A 314 VAQANRSRMNVPFQLADNT-----LDKVFLEE-SFAAGLHALKGHRV--VGGMRASIYNAMPIEGVKALTDFMIDFERRH 385 (386)
T ss_dssp BCGGGBCSSEEEEEESSGG-----GHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHcCceEEEEECCCcc-----ccHHHHHH-HHHCCCEEeCCCCC--cCeEEEEcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 122 22335555665311 13456555 47789998887543 355999994 58999999999999998764
No 228
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.89 E-value=3.7e-21 Score=178.37 Aligned_cols=323 Identities=13% Similarity=0.077 Sum_probs=216.4
Q ss_pred CCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC---C--CC-----CCCCHHHHHHHHHHHHhhCCCCCC-CCcE
Q 014769 42 RPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC---Y--AT-----NSGIPPARRAIADYLSRDLPYKLS-ADDV 110 (419)
Q Consensus 42 ~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~---Y--~~-----~~g~~~lr~~ia~~l~~~~~~~~~-~~~i 110 (419)
.++++|+.|. .+.++.|++++.+.+.+...+. | .. ..-+.+.|+.+++++ +++ +.+|
T Consensus 4 ~~~~~f~pgp------t~~~~~V~~a~~~~~~~~~~~~~s~~~~~hr~~~~~~~~~~~r~~la~ll------~~~~~~~v 71 (361)
T 3m5u_A 4 MRKINFSAGP------STLPLEILEQAQKELCDYQGRGYSIMEISHRTKVFEEVHFGAQEKAKKLY------ELNDDYEV 71 (361)
T ss_dssp CCCEECCSSS------CCCCHHHHHHHHHTSSSGGGSSSCGGGSCSSSHHHHHHHHHHHHHHHHHH------TCCTTEEE
T ss_pred cceEeecCCC------CCCcHHHHHHHHHHHHhcccCCceeeccCCCCHHHHHHHHHHHHHHHHHh------CCCCCceE
Confidence 4678888883 3678999999998765311000 1 11 122456777788887 444 4578
Q ss_pred EE-cccHHHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEe
Q 014769 111 YV-TLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVII 187 (419)
Q Consensus 111 ~~-t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~ 187 (419)
++ |+|+|++++.++..+. +||++++..-+..+ +...++..|.++..++.+....+.++++. + +++++++|.++
T Consensus 72 ~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~~~~~~a~~~G~~v~~~~~~~~g~~~~~~~~--~-l~~~t~lv~~~ 147 (361)
T 3m5u_A 72 LFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTKKAIKEAQILGVNVKTVASSEESNFDHIPRV--E-FSDNADYAYIC 147 (361)
T ss_dssp EEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHHHHHHHHHHTTCCEEEEEECTTTTSCSCCCC--C-CCTTSSEEEEE
T ss_pred EEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHHHHHHHHHHcCCceEEEecccCcCCCcCChh--h-cCCCCCEEEEe
Confidence 87 9999999999999998 88876433322322 23445677999999987654322244555 3 77889999999
Q ss_pred CCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEee
Q 014769 188 NPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVTN 267 (419)
Q Consensus 188 ~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~~ 267 (419)
+..|.||++++. +++ +|+++++|.+++. +..+..+..+ .+++.|.+|.+|.+| +|+++++
T Consensus 148 ~~e~~tG~~~~~--------i~~-~~~~~~vD~~q~~----g~~~id~~~~-----d~~~~s~~K~~gp~G--~g~l~~~ 207 (361)
T 3m5u_A 148 SNNTIYGTQYQN--------YPK-TKTPLIVDASSDF----FSRKVDFSNI-----ALFYGGVQKNAGISG--LSCIFIR 207 (361)
T ss_dssp SEETTTTEECSS--------CCC-CSSCEEEECGGGT----TSSCCCCTTE-----EEEEEETTTTSSCTT--CEEEEEE
T ss_pred CCCCCcceeCCc--------ccc-cCCEEEEEccccc----CCCCCCcccC-----CEEEEechhccCCCc--cEEEEEc
Confidence 888999998772 233 4999999999987 3233333322 267779999987667 8888886
Q ss_pred CCCCccchhhHHHHHHh--------------hhccccCCchHHHHHHHHHHcccchH-HHHHHHHHHHHHHHHHHHHhhc
Q 014769 268 DPNGIFQKSGIIDSIKD--------------CLSIYSDIPTFIQGAIPQILEKTKED-FFCKLIDTLRESAEICYDGVKE 332 (419)
Q Consensus 268 ~~~~~~~~~~~~~~l~~--------------~~~~~~~~~~~~~~a~~~~l~~~~~~-~~~~~~~~~~~~~~~l~~~l~~ 332 (419)
+ ++.+.+.. .....++++....+++.++++..... .++...++.+++.+++++.|++
T Consensus 208 ~--------~~~~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l~~~L~~ 279 (361)
T 3m5u_A 208 K--------DMLERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATMLYECIDL 279 (361)
T ss_dssp H--------HHHHHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHT
T ss_pred H--------HHHhhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHH
Confidence 5 23333321 11223577878778888887754444 5888889999999999999999
Q ss_pred CCCC-CCCCCCC--ceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHH
Q 014769 333 IPCI-SCPNKPE--GSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGR 407 (419)
Q Consensus 333 ~~~~-~~~~~p~--~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~ 407 (419)
++++ .....+. ....+.+.++.. ..-+.++... |.++||.+.+|... .+.+|+|+. .++++++.+++.
T Consensus 280 ~~g~~~~~~~~~~rs~~ivsf~~~~~----~~~~~~~~~~-L~~~gI~~~~g~~~--~g~iRiS~~~~~t~edId~l~~a 352 (361)
T 3m5u_A 280 SNGFYKGHADKKDRSLMNVSFNIAKN----KDLEPLFVKE-AEEAGMIGLKGHRI--LGGIRASIYNALNLDQVKTLCEF 352 (361)
T ss_dssp STTSEEESSCGGGBCSSEEEEEESSC----TTHHHHHHHH-HHHTTEECCBCCTT--TCSEEEECCTTSCHHHHHHHHHH
T ss_pred CCCeeeccCCHHHcCCeEEEEECCCc----hhhhHHHHHH-HHHCCCEEecCCCc--cCeEEEEccCCCCHHHHHHHHHH
Confidence 8766 3222221 233455556530 0012355544 47789999887542 356999994 589999999999
Q ss_pred HHHHHHHH
Q 014769 408 MKAFCQRH 415 (419)
Q Consensus 408 l~~~~~~~ 415 (419)
|+++.+++
T Consensus 353 l~~~~~~~ 360 (361)
T 3m5u_A 353 MKEFQGKY 360 (361)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99998774
No 229
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.85 E-value=1.3e-19 Score=172.17 Aligned_cols=336 Identities=14% Similarity=0.068 Sum_probs=206.2
Q ss_pred CCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHH
Q 014769 39 NDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQ 118 (419)
Q Consensus 39 ~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~ 118 (419)
.+|+.+|||..|.-... .-.-+|.|.+++.+++...... ..+.....++.+.|++.+ + ..+.|++++++++
T Consensus 84 ~dG~~ylD~~~g~~~~~-lGH~hp~v~~Av~~q~~~~~~~-~~~~~~~~~lae~l~~~~----p---~~~~v~f~~SGsE 154 (454)
T 4ao9_A 84 ADGHRYADFIAEYTAGV-YGHSAPEIRDAVIEAMQGGINL-TGHNLLEGRLARLICERF----P---QIEQLRFTNSGTE 154 (454)
T ss_dssp TTCCEEEESSGGGGTTT-TCSCCHHHHHHHHHHHHTCSCC-CSEESSHHHHHHHHHHHS----T---TCSEEEEESSHHH
T ss_pred CCCCEEEEccccHHhhc-ccCCCHHHHHHHHHHHhcCCCc-cCCcHHHHHHHHHHHHhC----C---CCCEEEEeCchHH
Confidence 45888999988743221 1235799999999999875331 222233356666666665 1 4689999999999
Q ss_pred HHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc------CCEEEEEeccCCCCcccChHHHHHhhcCC--ccEEEEeC
Q 014769 119 AVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK------QVEVRHFDLLPERNWEVDLDAVEALADKN--TAAMVIIN 188 (419)
Q Consensus 119 al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~------g~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~v~i~~ 188 (419)
|++.+++.... ..++|+....+|++....+... ......+|. -|++.+++.+... ..+.+|+.
T Consensus 155 A~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~-------nd~~~l~~~l~~~~~~iAavIvE 227 (454)
T 4ao9_A 155 ANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPY-------NDAQTARAQIERHGPEIAVVLVE 227 (454)
T ss_dssp HHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECT-------TCHHHHHHHHHHTGGGEEEEEEC
T ss_pred HHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCC-------chHHHHHHHHhhcCCceEEEEec
Confidence 99999988653 3378999999998753222111 112222221 2677887777542 34556667
Q ss_pred C-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCCceeEEEEe
Q 014769 189 P-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPGWRFGWLVT 266 (419)
Q Consensus 189 p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G~r~G~~~~ 266 (419)
| ....|. ..++++|++|.++|++||+++|+||++.+ ..|... ....++..+.++ +++|.+ ..|+++|.+++
T Consensus 228 Pv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~tG--R~G~~~-a~e~~gv~PDi~---t~gK~l-ggG~Piga~~~ 300 (454)
T 4ao9_A 228 PMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMTS--RLAPHG-LANKLGIRSDLT---TLGKYI-GGGMSFGAFGG 300 (454)
T ss_dssp SEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTGG--GGSTTC-HHHHHTCCCSEE---EEEGGG-GTTSSCEEEEE
T ss_pred cccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCcC--CCcccc-chhccCCCCcEE---Eecccc-CCCCcceeeee
Confidence 7 455665 46789999999999999999999999984 223221 112233333344 577995 56899999998
Q ss_pred eCCCCccchhhHHHHHHhh-----hccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhh----cCCCCC
Q 014769 267 NDPNGIFQKSGIIDSIKDC-----LSIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICYDGVK----EIPCIS 337 (419)
Q Consensus 267 ~~~~~~~~~~~~~~~l~~~-----~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~----~~~~~~ 337 (419)
+. ++++.+... ...+++.++++..++.+.|+....+. ..+++.++.+++++.|+ +.+ +.
T Consensus 301 ~~--------ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~---~~~~~~~~g~~l~~~L~~l~~~~~-~~ 368 (454)
T 4ao9_A 301 RA--------DVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPE---AAGALAERGEALRARLNALCANEG-VA 368 (454)
T ss_dssp CH--------HHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHH---HHHHHHHHHHHHHHHHHHHHHHHT-BS
T ss_pred HH--------HHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccC---hhHHHHHHHHHHHHHHHHHHhhCC-CC
Confidence 76 566666432 12355678888888888887644222 22333444444444443 332 21
Q ss_pred CCCCCCceEEEEeecCcccccCC-----CCH---HHHHHHHHHhcCeEeecCCCCCCCCeEEEEeecCHHHHHHHHHHHH
Q 014769 338 CPNKPEGSMVTMVKLNPWLLEDI-----NDD---IEFALKLAKEESVIVTPGIYVGLKNWLRIAFCAEPSALKDGLGRMK 409 (419)
Q Consensus 338 ~~~~p~~g~~~~~~~~~~~~~~~-----~~~---~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~~~~~~~l~~~l~~l~ 409 (419)
.....-|.++.+.+........ .+. ..+...+ .++||++.|.. .+.+++..++++|+++++.|+
T Consensus 369 -~~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l-l~~Gv~~~p~~------~~~~s~~~T~~dId~~l~al~ 440 (454)
T 4ao9_A 369 -MQFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHL-LNEDIYSSPRG------FVVLSLPLTDADIDRYVAAIG 440 (454)
T ss_dssp -CEEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHH-HHTTEECCTTC------EEECCTTCCHHHHHHHHHHHH
T ss_pred -EEEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHH-HHCCEEEcCCC------CEEEeCCCCHHHHHHHHHHHH
Confidence 1111224344444432111000 011 2344455 45699998743 455566679999999999999
Q ss_pred HHHHHHhc
Q 014769 410 AFCQRHTK 417 (419)
Q Consensus 410 ~~~~~~~~ 417 (419)
+++.++..
T Consensus 441 ~~l~~~~a 448 (454)
T 4ao9_A 441 SFIGGHGA 448 (454)
T ss_dssp HHHHHSGG
T ss_pred HHHHhccc
Confidence 99988753
No 230
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.84 E-value=4.9e-19 Score=176.34 Aligned_cols=304 Identities=13% Similarity=0.042 Sum_probs=189.2
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCC
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPER 164 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~ 164 (419)
-..++++.+|+++ +. ...+++++|++.++..++.+++++||.|+++.++|.++...+...|+.+++++...+
T Consensus 196 ~i~eaE~~lA~~f------Ga-~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~~l~lsGa~pv~v~~~~~- 267 (715)
T 3n75_A 196 PHKEAEQYIARVF------NA-DRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTHLMMMSDVTPIYFRPTRN- 267 (715)
T ss_dssp HHHHHHHHHHHHH------TC-SEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHHHHHSCCEEEEECCCBC-
T ss_pred HHHHHHHHHHHHh------CC-CCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHHHHHHcCCEEEEEecccc-
Confidence 3568999999998 22 235677888899999999999999999999999999999999999999998886532
Q ss_pred Cccc---------ChHHHHHhhcC--Ccc---EEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCC
Q 014769 165 NWEV---------DLDAVEALADK--NTA---AMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGS 229 (419)
Q Consensus 165 ~~~~---------~~~~l~~~~~~--~~~---~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~ 229 (419)
.+++ |++.+++++++ +++ ++++++| ||+|.+.+ +++|.++|++++ +++||+|+... +++
T Consensus 268 ~~gi~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~d---l~~I~ela~~~~--livDEAH~~~~~f~~ 341 (715)
T 3n75_A 268 AYGILGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYN---TDFIKKTLDVKS--IHFDSAWVPYTNFSP 341 (715)
T ss_dssp TTCCBCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEEC---HHHHHHHCCCSE--EEEECTTCTTGGGSG
T ss_pred ccccccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCC---HHHHHHHhCcCc--EEEccccccccccCC
Confidence 3443 89999998864 233 7999999 99999999 778888887663 79999998653 332
Q ss_pred CCCCCccccCC---CCc-EEEEecCCCcCCCCCc-eeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHH
Q 014769 230 IPYTPMGLFGS---IVP-VITLGSISKRWLVPGW-RFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQIL 304 (419)
Q Consensus 230 ~~~~~~~~~~~---~~~-~i~~~s~sK~~~~~G~-r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l 304 (419)
. .+....+.. .+. ++++.|+||++ +|+ ..|++.+++.- . ...++..... ..+++++.+..+++..++
T Consensus 342 ~-~~~~~al~~g~~aD~vii~~~S~hKtL--~gltqgs~i~v~~~i--~--~~~~~~~~~~-~~STSpsy~~~AsldaA~ 413 (715)
T 3n75_A 342 I-YEGKCGMSGGRVEGKVIYETQSTHKLL--AAFSQASMIHVKGDV--N--EETFNEAYMM-HTTTSPHYGIVASTETAA 413 (715)
T ss_dssp G-GTTSSTTSSSCCTTCEEEEEECHHHHS--SCCTTCEEEEEESCC--C--HHHHHHHHHH-TSCSSCCHHHHHHHHHHH
T ss_pred c-cccccccccCcCCCEEEEEEecccccc--cCCCCeeEEEeCchh--h--HHHHHHHHHh-hcCCCchHHHHHHHHHHH
Confidence 1 111111211 123 36699999994 444 35888887631 1 1122222222 224566776666666555
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhhcCCC------CCCCCC------------C----------CceE------EEEe
Q 014769 305 EKTKEDFFCKLIDTLRESAEICYDGVKEIPC------ISCPNK------------P----------EGSM------VTMV 350 (419)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~------~~~~~~------------p----------~~g~------~~~~ 350 (419)
+......-.+..+++.++.+.+++.|+++++ +.++.. | ..+. -+.+
T Consensus 414 ~~~~~~~g~~~~~~l~~~a~~~r~~L~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~gf~~~~~~~~~~Dp~Kl~i 493 (715)
T 3n75_A 414 AMMKGNAGKRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKNIDNEHMYLDPIKVTL 493 (715)
T ss_dssp HHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCCCEESSCSCCCSCSCEECCTTCCTTCCTTCCSSSEEECTTEEEE
T ss_pred HHHHhhccHHHHHHHHHHHHHHHHHHHHhhhhcccceeeccCcccccchhhhccCcccccccccccccCcccCCCeEEEE
Confidence 4322122334556666666666666654432 121110 0 0011 1222
Q ss_pred ecCcccccC-----CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEE--EeecCHHHHHHHHHHHHHHHHHH
Q 014769 351 KLNPWLLED-----INDDIEFALKLAKEESVIVTPGIYVGLKNWLRI--AFCAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 351 ~~~~~~~~~-----~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ri--s~~~~~~~l~~~l~~l~~~~~~~ 415 (419)
..+.....| ..+...+.+. |+++||.+--.. ...+-+ +++.++++++.+++.|.++-+.+
T Consensus 494 ~~~~~~~~G~~~~~Gi~g~~~~~~-L~~~~I~~E~~d----~~~vl~l~s~g~~~~~~~~L~~aL~~~~~~~ 560 (715)
T 3n75_A 494 LTPGMEKDGTMSDFGIPASIVAKY-LDEHGIVVEKTG----PYNLLFLFSIGIDKTKALSLLRALTDFKRAF 560 (715)
T ss_dssp ECSCBCTTSCBCSSCCCHHHHHHH-HHHTTCCCSEEE----TTEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred EcCCCCCCCccccCCCcHHHHHHH-HHHCCCEEEecC----CCcEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 222211101 1234455544 478899875433 233333 33668889999988888776544
No 231
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.82 E-value=3e-18 Score=164.21 Aligned_cols=352 Identities=11% Similarity=0.035 Sum_probs=212.6
Q ss_pred cCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCC-CHHHHHHHHHHHHhhCCCCCCCCcEEEcccH
Q 014769 38 KNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSG-IPPARRAIADYLSRDLPYKLSADDVYVTLGC 116 (419)
Q Consensus 38 ~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g-~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~ 116 (419)
..+|+.+|||..|.-.... -.-+|.+.+++.+++.... .|....+ ..+....+|+.|.+.. +.+.+.|++++++
T Consensus 63 D~dG~~ylD~~~g~~~~~l-Gh~~p~v~~Ai~~q~~~l~--~~~~~~~~~~~~~~~lAe~L~~~~--p~~~~~v~f~~sG 137 (473)
T 4e3q_A 63 DVNGRRYLDANSGLWNMVA-GFDHKGLIDAAKAQYERFP--GYHAFFGRMSDQTVMLSEKLVEVS--PFDSGRVFYTNSG 137 (473)
T ss_dssp ETTCCEEEETTTTTTTCTT-CSCCHHHHHHHHHHHHHCC--CCCCCTTEEEHHHHHHHHHHHHHS--SCSSCEEEEESSH
T ss_pred eCCCCEEEEcccCHHHhhc-cCCCHHHHHHHHHHHHhcc--cccccccccCHHHHHHHHHHHhhC--CCCccEEEEeCch
Confidence 3468899999888543221 2357999999999987632 1222111 1233444555554432 3345789999999
Q ss_pred HHHHHHHHHHhcC-------CC-CeEEeeCCCCCCcHHHHhhcCC------------EEEEEeccCC---CCcccC----
Q 014769 117 KQAVEVILSVLAR-------PG-ANVLLPRPGWPYYEGIAQRKQV------------EVRHFDLLPE---RNWEVD---- 169 (419)
Q Consensus 117 ~~al~~~~~~l~~-------~g-d~vlv~~p~~~~~~~~~~~~g~------------~~~~~~~~~~---~~~~~~---- 169 (419)
++|++.+++.... ++ .+|+....+|++....+..... ....++.+.. ......
T Consensus 138 sEA~e~AiKlAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 217 (473)
T 4e3q_A 138 SEANDTMVKMLWFLHAAEGKPQKRKILTRWNAYHGVTAVSASMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQF 217 (473)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCCCcceEEEeeceECCCccccccccccccccccCCCCCcccccCCCcccccccccchhhHH
Confidence 9999999987531 33 5788899999875433322111 1222222100 000011
Q ss_pred ----hHHHHHhhc---CCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCC
Q 014769 170 ----LDAVEALAD---KNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGS 240 (419)
Q Consensus 170 ----~~~l~~~~~---~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~ 240 (419)
.+++++.+. .+..+.+|..| +.-.|. ..+.++++++.++|+++|+++|.||++.+|...|..+ ....++.
T Consensus 218 ~~~~~~~l~~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv 296 (473)
T 4e3q_A 218 VARLARELEETIQREGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTW-GCVTYDF 296 (473)
T ss_dssp HHHHHHHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSC-HHHHTTC
T ss_pred HHHHHHHHHHHHHhhCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchh-HHHhcCC
Confidence 123333332 23456677777 455665 4678899999999999999999999999987666433 2233343
Q ss_pred CCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhh--------hccccCCchHHHHHHHHHHcccchHHH
Q 014769 241 IVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDC--------LSIYSDIPTFIQGAIPQILEKTKEDFF 312 (419)
Q Consensus 241 ~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~--------~~~~~~~~~~~~~a~~~~l~~~~~~~~ 312 (419)
.+.++ +++|.++..++++|.+++++ ++.+.+... ...+++.++++..++.+.|+...++.+
T Consensus 297 ~PDi~---t~~K~l~gG~~Pl~av~~~~--------~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~~~l 365 (473)
T 4e3q_A 297 TPDAI---ISSKNLTAGFFPMGAVILGP--------ELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMNEGL 365 (473)
T ss_dssp CCSEE---EECGGGGTTSSCCEEEEECH--------HHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHHSSH
T ss_pred CCChH---HhcccccCCCCCcccccccH--------HHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhccccH
Confidence 33444 56799654449999999876 576666432 123567788888888888775332222
Q ss_pred HHHHHHHHHHHHHHHHHhhc---CCCCCCCCCCCceEEEEeecCcccc-----c-CCCCHHHHHHHHHHhcCeEeecCCC
Q 014769 313 CKLIDTLRESAEICYDGVKE---IPCISCPNKPEGSMVTMVKLNPWLL-----E-DINDDIEFALKLAKEESVIVTPGIY 383 (419)
Q Consensus 313 ~~~~~~~~~~~~~l~~~l~~---~~~~~~~~~p~~g~~~~~~~~~~~~-----~-~~~~~~~~~~~ll~~~gv~v~~g~~ 383 (419)
.+++++..+++.+.|++ .|.+..+ -.-|+++-+.+..... . .......+...+ .++||++.|.
T Consensus 366 ---~~~~~~~g~~l~~~L~~l~~~~~v~~v--RG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~-~~~Gll~~~~-- 437 (473)
T 4e3q_A 366 ---AENVRRLAPRFEERLKHIAERPNIGEY--RGIGFMWALEAVKDKASKTPFDGNLSVSERIANTC-TDLGLICRPL-- 437 (473)
T ss_dssp ---HHHHHHHHHHHHHHHHHHTTSTTEEEE--EEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHH-HHTTEECEEE--
T ss_pred ---HHHHHHHHHHHHHHHHHHhcCCCeeEE--eecceEEEEEEecCccccccccccHHHHHHHHHHH-HHCCcEEEec--
Confidence 23344444555555544 3333211 1234555555422110 0 001123455555 6679999875
Q ss_pred CCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 384 VGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 384 ~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
.+.+|+++ ..+++++++++++|++++++..+
T Consensus 438 ---g~~i~l~PPL~it~~eid~~~~~l~~al~~v~a 470 (473)
T 4e3q_A 438 ---GQSVVLCPPFILTEAQMDEMFDKLEKALDKVFA 470 (473)
T ss_dssp ---TTEEEECCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 35789887 46899999999999999988765
No 232
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.82 E-value=6.8e-18 Score=161.12 Aligned_cols=351 Identities=15% Similarity=0.114 Sum_probs=209.0
Q ss_pred CCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC--CCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHH
Q 014769 40 DPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC--YATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCK 117 (419)
Q Consensus 40 ~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~--Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~ 117 (419)
+|+.+|||..|.-... .-.-+|.+.+++.+++....... +.+.....++.+.+++.. + .-..+.++++++++
T Consensus 62 dG~~ylD~~~g~~~~~-lGh~~p~v~~Ai~~q~~~~~~~~~~~~~~~~~~~lae~L~~~~----p-~~~~~~v~f~~sGs 135 (456)
T 4atq_A 62 DGNSFIDLGSGIAVTS-VGASDPAVVAAVQEAAAHFTHTCFMVTPYEGYVAVTEQLNRLT----P-GDHAKRTVLFNSGA 135 (456)
T ss_dssp TSCEEEESSHHHHTCT-TCTTCHHHHHHHHHHHHHCSCCTTTTSCCHHHHHHHHHHHHHS----S-CSSCEEEEEESSHH
T ss_pred CCCEEEEccccHHHHh-cCCCCHHHHHHHHHHHhhccCcccCccCcHHHHHHHHHHHHhC----C-CCCCcEEEEeCChH
Confidence 4778899988732211 12357999999999887643211 122222234444444443 2 11346799999999
Q ss_pred HHHHHHHHHhcC--CCCeEEeeCCCCCCcHHHHhhc-C-------------CEEEEEeccCC----CCcccChHHHH---
Q 014769 118 QAVEVILSVLAR--PGANVLLPRPGWPYYEGIAQRK-Q-------------VEVRHFDLLPE----RNWEVDLDAVE--- 174 (419)
Q Consensus 118 ~al~~~~~~l~~--~gd~vlv~~p~~~~~~~~~~~~-g-------------~~~~~~~~~~~----~~~~~~~~~l~--- 174 (419)
+|++.+++.... ...+|+....+|++....+... + ..+..+|.... .....+.+.++
T Consensus 136 EA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 215 (456)
T 4atq_A 136 EAVENAVKVARLATGRDAVVAFDHAYHGRTNLTMALTAKAMPYKTNFGPFAPEVYRMPMSYPFREENPEITGAEAAKRAI 215 (456)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCGGGCSSTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhhhhcCCeEEEEecccCCccccccccccCccccccCCCCccccceecccccccccCCCcccHHHHHHHHH
Confidence 999999987643 3478999999999865433221 1 12333332110 00011222222
Q ss_pred ----HhhcCCccEEEEeCC-CCcccc-CCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEe
Q 014769 175 ----ALADKNTAAMVIINP-GNPCGN-VFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLG 248 (419)
Q Consensus 175 ----~~~~~~~~~v~i~~p-~nptG~-~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 248 (419)
..+..+..+.+|+.| +.-.|. ..++++++++.++|++||+++|+||++.++...|..+ ....++..+.++
T Consensus 216 ~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~tG~GRtG~~~-a~e~~gv~PDiv--- 291 (456)
T 4atq_A 216 TMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIADEVQSGFCRTGEWF-AVDHEGVVPDII--- 291 (456)
T ss_dssp HHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSS-GGGGTTCCCSEE---
T ss_pred HHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEecccccccCCccccc-cccccCCCCchh---
Confidence 222334556677777 444565 5678999999999999999999999999976666433 233344333444
Q ss_pred cCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhh-ccccCCchHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Q 014769 249 SISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCL-SIYSDIPTFIQGAIPQILEKTKEDFFCKLIDTLRESAEICY 327 (419)
Q Consensus 249 s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 327 (419)
+++|.+ ..|+++|.+++++ ++.+.+.... ..+++.++++..++.+.|+...++.+. ++.++..+++.
T Consensus 292 t~gK~l-ggg~P~~av~~~~--------~i~~~~~~~~~~~Tf~gnpla~aaala~L~~i~~~~l~---~~~~~~g~~l~ 359 (456)
T 4atq_A 292 TMAKGI-AGGLPLSAITGRA--------DLLDAVHPGGLGGTYGGNPVACAAALAAIDTMEQHDLN---GRARHIEELAL 359 (456)
T ss_dssp EECGGG-GTTSSCEEEEEEH--------HHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHH---HHHHHHHHHHH
T ss_pred hhhhcc-cCcCCceeeEecH--------HHHhcccccCCCCCCCCChHHHHhhHHHHHHHhhccHH---HHHHHHHHHHH
Confidence 567994 5789999999876 5666554432 346778888888888888764333222 23333333333
Q ss_pred HHhh----cCCC--CCCCCC-CCceEEEEeecCccccc--CCCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ec
Q 014769 328 DGVK----EIPC--ISCPNK-PEGSMVTMVKLNPWLLE--DINDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CA 396 (419)
Q Consensus 328 ~~l~----~~~~--~~~~~~-p~~g~~~~~~~~~~~~~--~~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~ 396 (419)
+.|+ +++. ..++.. -.-|+++-+.+...... .......+...+ .++|+++.++..+ .+.+||.+ ..
T Consensus 360 ~~L~~l~~~~~~~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~-~~~Gvl~~~~g~~--~~~irl~PpL~i 436 (456)
T 4atq_A 360 GKLRELAAELSAGGGSVVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAAC-LKEGVIILTCGTY--GNVIRLLPPLVI 436 (456)
T ss_dssp HHHHHHHHHCC-----CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHH-HHTTEECEEECTT--SCEEEECCCTTC
T ss_pred HHHHHHHHhcccccCCceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHH-HHCCCEEEecCCC--CCEEEEECCCCC
Confidence 3333 2321 111111 12355666666321100 000123455555 5679998875432 46899997 46
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 014769 397 EPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 397 ~~~~l~~~l~~l~~~~~~~ 415 (419)
+++++++++++|+++++.+
T Consensus 437 t~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 437 SDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp CHHHHHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHHHHhh
Confidence 8999999999999999865
No 233
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.76 E-value=1.2e-16 Score=148.19 Aligned_cols=305 Identities=12% Similarity=0.056 Sum_probs=192.8
Q ss_pred HHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC----CCeEEeeCCCCCCcHHHHhhcCCEEEEEeccC-CCCccc
Q 014769 94 ADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP----GANVLLPRPGWPYYEGIAQRKQVEVRHFDLLP-ERNWEV 168 (419)
Q Consensus 94 a~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~ 168 (419)
.+|++. .|++ .....++++|+|.++..++.+.+++ +|.|+++..+|.++...+...|+.+++++... ++...+
T Consensus 123 ld~L~~-~G~~-~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~kAliL~Gl~Pv~V~p~~d~~~~~i 200 (501)
T 3hl2_A 123 LDIIKL-AGVH-TVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMITAGFEPVVIENVLEGDELRT 200 (501)
T ss_dssp HHHHHH-TTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECEEEETTEEEE
T ss_pred HHHHHH-cCCC-CCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHHHHHHHcCCeEEEEeeeecccccCC
Confidence 344444 4655 3346899999998887777777663 49999999999999999999999999887522 235789
Q ss_pred ChHHHHHhhcC---CccEEEEeCC-CCccccCCCHHHHHHHHHHHHhCCCeEEEcccccccc-cCCCCCCCccccC-CCC
Q 014769 169 DLDAVEALADK---NTAAMVIINP-GNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLT-FGSIPYTPMGLFG-SIV 242 (419)
Q Consensus 169 ~~~~l~~~~~~---~~~~v~i~~p-~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~-~~~~~~~~~~~~~-~~~ 242 (419)
|++.+++++++ +..++++++| .|..+.+-+ +++|+++|++||+++++|+||+... +....+.....++ .+
T Consensus 201 d~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~dd---I~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD- 276 (501)
T 3hl2_A 201 DLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDR---LEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRID- 276 (501)
T ss_dssp CHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCC-
T ss_pred CHHHHHHHHHhcCCCcEEEEEecCCCCCCccccc---HHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCc-
Confidence 99999998865 2344455554 443445566 9999999999999999999998633 1111111112233 32
Q ss_pred cEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCC-chHHHHHHHHHHcccchHHHHHHHHHHHH
Q 014769 243 PVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDI-PTFIQGAIPQILEKTKEDFFCKLIDTLRE 321 (419)
Q Consensus 243 ~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~a~~~~l~~~~~~~~~~~~~~~~~ 321 (419)
+++.|.+|.+..+ +..|.+..++ +++++++.... .+.. ..++.......+. ...+.+++..++..+
T Consensus 277 --~vVqS~HK~llvp-IGG~ii~~~d-------~e~l~~~~~~y--PGr~S~Spsldl~~tLL~-lGr~Gy~~ll~e~~e 343 (501)
T 3hl2_A 277 --AFVQSLDKNFMVP-VGGAIIAGFN-------DSFIQEISKMY--PGRASASPSLDVLITLLS-LGSNGYKKLLKERKE 343 (501)
T ss_dssp --EEEEEHHHHHCCC-SSCEEEEESC-------HHHHHHHHHTS--CSCBCSHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred --EEEecccccceee-cCceEEEeCC-------HHHHHHHHHhC--CCCCCCcHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 6777999996554 3334444544 24555553322 1222 2222222222333 234667788888888
Q ss_pred HHHHHHHHhhcC---CCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCe----EeecCC----------CC
Q 014769 322 SAEICYDGVKEI---PCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESV----IVTPGI----------YV 384 (419)
Q Consensus 322 ~~~~l~~~l~~~---~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv----~v~~g~----------~~ 384 (419)
+.+++++.|+++ -+-.....|....-+-+.+.....+.. .....+..+|...+| .|.+|. .|
T Consensus 344 la~~L~~~L~~la~~~ge~ll~~~~n~is~a~tl~~~~~~~~-~~~t~~gs~Lf~r~vsG~Rvv~~~~~~~i~g~~f~~~ 422 (501)
T 3hl2_A 344 MFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRD-KAVTQLGSMLFTRQVSGARVVPLGSMQTVSGYTFRGF 422 (501)
T ss_dssp HHHHHHHHHHHHHHTTTCCBCCCTTCSSEEEEECTTSCTTTS-CHHHHHHHHHHHTTCCSCEEECTTCCEEETTEEESST
T ss_pred HHHHHHHHHHHHHHhcChhhcCCCCCceeEEEeccccccccc-ccHHHHHHHHHhcCCCcceeecCCCceEECCeeecCc
Confidence 888888888763 234434456555555555653211111 123333444455566 244555 45
Q ss_pred CC------CCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 385 GL------KNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 385 ~~------~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
+. ..|+-++. +.+++|++.++++|++++.++.++
T Consensus 423 g~h~~~~~~~yl~~a~aiG~~~~~v~~~~~~l~~~~~~~~~~ 464 (501)
T 3hl2_A 423 MSHTNNYPCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKE 464 (501)
T ss_dssp TTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHC-
T ss_pred ccCCCCCCchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 43 35777776 579999999999999999998765
No 234
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.75 E-value=5.6e-18 Score=172.92 Aligned_cols=346 Identities=13% Similarity=0.059 Sum_probs=205.1
Q ss_pred CeeeccCCCCCCCCCCC-C-hHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCC-CCcEEEcccHHHH
Q 014769 43 PVVPLGYGDPTAFPCFR-T-AVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLS-ADDVYVTLGCKQA 119 (419)
Q Consensus 43 ~~i~l~~g~~~~~~~~~-~-~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-~~~i~~t~g~~~a 119 (419)
.++|+..|.-+.. ++ - +|++.+|+.+++.......+.. ...+....+++.|.+..+ -+ .+.+++++++++|
T Consensus 381 ~ylD~~sg~~~~~--lGh~~~p~i~~Ai~~Q~~~l~h~~~~~--~~~~~~~~Lae~L~~~~p--~~~l~~vff~~SGSeA 454 (831)
T 4a0g_A 381 QQFDACASWWTQG--PDPTFQAELAREMGYTAARFGHVMFPE--NVYEPALKCAELLLDGVG--KGWASRVYFSDNGSTA 454 (831)
T ss_dssp EEEETTHHHHTCC--CCHHHHHHHHHHHHHHHHHHSSCCCTT--EECHHHHHHHHHHHHTTT--TTTCCEEEEESSHHHH
T ss_pred heeeecccHhhcC--CCCCCCHHHHHHHHHHHhhcccccccc--cCCHHHHHHHHHHHHhCC--CCCCCEEEECCChhHH
Confidence 6788887732222 23 3 7999999999986522111111 112333455555544222 12 4689999999999
Q ss_pred HHHHHHHhc-----CCC------------CeEEeeCCCCCCcHHHHhhc-CC---------------EE-----------
Q 014769 120 VEVILSVLA-----RPG------------ANVLLPRPGWPYYEGIAQRK-QV---------------EV----------- 155 (419)
Q Consensus 120 l~~~~~~l~-----~~g------------d~vlv~~p~~~~~~~~~~~~-g~---------------~~----------- 155 (419)
++.+++... .+| .+|+....+|++....+... |. .+
T Consensus 455 ~E~AlK~A~r~~~~~~g~~~~~~~~~~~r~~iI~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 534 (831)
T 4a0g_A 455 IEIALKMAFRKFCVDHNFCEATEEEKHIVVKVIALRGSYHGDTLGAMEAQAPSPYTGFLQQPWYTGRGLFLDPPTVFLSN 534 (831)
T ss_dssp HHHHHHHHHHHHHHTTTC---------CCEEEEEETTCCCCSSHHHHHTSCCCGGGSTTTCTTCCCCEEEECCCEEEEET
T ss_pred HHHHHHHHHHHHHhhcCCCccccccccCccEEEEecCCcccCceeeeeccCccccccccccccccCCccccCCccccccC
Confidence 999988762 122 36888899998753332222 11 00
Q ss_pred --EEEeccCC------CCccc-C------------------hHHHHHhhc-------CCccEEEEeCC--CCccccC-CC
Q 014769 156 --RHFDLLPE------RNWEV-D------------------LDAVEALAD-------KNTAAMVIINP--GNPCGNV-FT 198 (419)
Q Consensus 156 --~~~~~~~~------~~~~~-~------------------~~~l~~~~~-------~~~~~v~i~~p--~nptG~~-~~ 198 (419)
..++.+.. +.... + .+.|++.+. ....+.+++.| ++..|.. +|
T Consensus 535 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~ 614 (831)
T 4a0g_A 535 GSWNISLPESFSEIAPEYGTFTSRDEIFDKSRDASTLARIYSAYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVD 614 (831)
T ss_dssp TEEEEECCTTSCCCCSSTTEESCHHHHHCGGGGGSHHHHHHHHHHHHHC---------CEEEEEEECCSEETTTTSEEEC
T ss_pred CceEecCCccccccccccccccchhhhhcccccchhhhHHHHHHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCC
Confidence 11122110 00000 1 245666664 23455677777 5777764 68
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCCccccCCCCcEEEEecCCCcCCCCC-ceeEEEEeeCCCCccchhh
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTPMGLFGSIVPVITLGSISKRWLVPG-WRFGWLVTNDPNGIFQKSG 277 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~G-~r~G~~~~~~~~~~~~~~~ 277 (419)
.+++++|.++|++||+++|+||++.++...|..+ ....++..++++ +++|.++. | +++|++++++ +
T Consensus 615 ~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~f-a~e~~gv~PDii---tlsK~L~g-G~~Plgav~~~~--------~ 681 (831)
T 4a0g_A 615 PLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVET-TTELLGCKPDIA---CFAKLLTG-GMVPLAVTLATD--------A 681 (831)
T ss_dssp HHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSS-THHHHSSCCSEE---EECGGGGT-TSSCCEEEEECH--------H
T ss_pred HHHHHHHHHHHHHcCCeEEEEcCccccccCCCch-hhHhcCCCCcEE---EEeccccc-CccCcEEEEECH--------H
Confidence 9999999999999999999999999987766544 233333333333 68999654 6 8999999976 5
Q ss_pred HHHHHHhh-------hccccCCchHHHHHHHHHHcccchHHHHHHH----HHHHH-HHHHHHHHhhcCCCCCCCCCCCce
Q 014769 278 IIDSIKDC-------LSIYSDIPTFIQGAIPQILEKTKEDFFCKLI----DTLRE-SAEICYDGVKEIPCISCPNKPEGS 345 (419)
Q Consensus 278 ~~~~l~~~-------~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~----~~~~~-~~~~l~~~l~~~~~~~~~~~p~~g 345 (419)
+++.+... ...+++.+++++.++.+.|+....+.+.++. +++++ ..+.+.+.+.+.|.+..+ . ..|
T Consensus 682 i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~~~l~~~~~~~~~~l~~~l~~~l~~~l~~~~~v~~v-r-g~G 759 (831)
T 4a0g_A 682 VFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKDPETNHNITSQGKTLRELWDEELVQQISSHSAVQRV-V-VIG 759 (831)
T ss_dssp HHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHCTTTCTTBCTTSSBBCCCSCHHHHHHHHHSTTEEEE-E-EET
T ss_pred HHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCceeE-e-ecc
Confidence 77766532 2245677888888888777642211111111 11111 012344445555544422 2 335
Q ss_pred EEEEeecCccccc-C--CCCHHHHHHHHHHhcCeEeecCCCCCCCCeEEEEe--ecCHHHHHHHHHHHHHHHHHH
Q 014769 346 MVTMVKLNPWLLE-D--INDDIEFALKLAKEESVIVTPGIYVGLKNWLRIAF--CAEPSALKDGLGRMKAFCQRH 415 (419)
Q Consensus 346 ~~~~~~~~~~~~~-~--~~~~~~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~ 415 (419)
.+..+.+...... . .....++...+ .++||++.|+ .+.+|+++ ..++++|++++++|.++++++
T Consensus 760 l~~~iel~~~~~~~~~~~~~a~~~~~~l-~e~Gv~v~p~-----g~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 760 TLFALELKADASNSGYASLYAKSLLIML-REDGIFTRPL-----GNVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp TEEEEEEC---------CHHHHHHHHHH-HHTTEECCCB-----TTEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cEEEEEEecCccccccchHHHHHHHHHH-HHCCcEEEec-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 5666666421000 0 00133555555 5689999886 36899996 579999999999999998764
No 235
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.74 E-value=7.7e-16 Score=142.05 Aligned_cols=365 Identities=12% Similarity=0.033 Sum_probs=218.4
Q ss_pred hCCchhHHHHHHHHHHhhhcCCCCCeeeccCCCCCCCCCCCChHHHHHHHHHHHhCCCCCC------CCCCCCCHHHHHH
Q 014769 19 AAPAVTVKTSLASIIDSVNKNDPRPVVPLGYGDPTAFPCFRTAVEAEDAIVDAVRSGKFNC------YATNSGIPPARRA 92 (419)
Q Consensus 19 ~~~~~~i~~~~~~~~~~~~~~~~~~~i~l~~g~~~~~~~~~~~~~v~~a~~~~~~~~~~~~------Y~~~~g~~~lr~~ 92 (419)
......|.+++++-..+. ..-|+|=-.. --.++.+.+++...+.+....+ |+..+-+.+++..
T Consensus 36 ~~~Dpei~~~i~~E~~RQ-----~~~ieLIASE------N~~S~aV~~a~gS~ltnKYaEGyPg~RyYgGce~vD~iE~l 104 (490)
T 3ou5_A 36 SDSDPEMWELLQREKDRQ-----CRGLELIASE------NFCSRAALEALGSCLNNKYSEGYPGKRYYGGAEVVDEIELL 104 (490)
T ss_dssp HHHCHHHHHHHHHHHHHH-----HHSEECCTTC------CCCCHHHHHHHTSGGGTCCCCC----------CHHHHHHHH
T ss_pred hhhCHHHHHHHHHHHHHH-----HcCceEecCC------CcCCHHHHHHhcCcccccccCCCCCccccCCChHHHHHHHH
Confidence 344556677776544432 2335543332 2357888888776665533223 3334444567766
Q ss_pred HHHHHHhhCCCCCCCCcE-EEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH--------HhhcC--CEEEEEecc
Q 014769 93 IADYLSRDLPYKLSADDV-YVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI--------AQRKQ--VEVRHFDLL 161 (419)
Q Consensus 93 ia~~l~~~~~~~~~~~~i-~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~--------~~~~g--~~~~~~~~~ 161 (419)
..+..++.+|.....-.| +--.+++.|+..++.++++|||+|+..+..+.++..- ....| .+...++++
T Consensus 105 a~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg~~~~~~~Y~vd 184 (490)
T 3ou5_A 105 CQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKLN 184 (490)
T ss_dssp HHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------------CBCEE
T ss_pred HHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCcccccccccccccccccC
Confidence 666776666643211112 3346778899999999999999999988877654211 11112 234445555
Q ss_pred CCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccccc-ccCCCCCCCccccC
Q 014769 162 PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHL-TFGSIPYTPMGLFG 239 (419)
Q Consensus 162 ~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~-~~~~~~~~~~~~~~ 239 (419)
++ +..+|.|.+++.... +|++|+.-.-.+| ..++ ++++.++|++.|.++++|.+|-.. +-+|..+.|+ .+
T Consensus 185 ~~-t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id---~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~psP~-~~- 256 (490)
T 3ou5_A 185 PK-TGLIDYNQLALTARLFRPRLIIAGTSAYA--RLID---YARMREVCDEVKAHLLADMAHISGLVAAKVIPSPF-KH- 256 (490)
T ss_dssp TT-TTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCC---HHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGG-GT-
T ss_pred CC-CCcccHHHHHHHHhhcCCCeEEECCccCc--cccC---HHHHHHHHhhcccEEEechhhhhhhhcccccCCcc-cc-
Confidence 44 457999999887655 5666655433343 3455 888999999999999999999654 3344333333 33
Q ss_pred CCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccc-------hhhHHHHHHhhhc--cccCCchHHHHHHHHHHcccchH
Q 014769 240 SIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQ-------KSGIIDSIKDCLS--IYSDIPTFIQGAIPQILEKTKED 310 (419)
Q Consensus 240 ~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~-------~~~~~~~l~~~~~--~~~~~~~~~~~a~~~~l~~~~~~ 310 (419)
.+ ++.+|++|+ ++|.|.|.+.+++...-.. ..++.+++..... ..+++......+.+.++.+-...
T Consensus 257 AD---vVTtTTHKT--LrGPrGG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~Ea~~p 331 (490)
T 3ou5_A 257 AD---IVTTTTHKT--LRGARSGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTP 331 (490)
T ss_dssp CS---EEEEESSST--TCSCSCEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSH
T ss_pred ce---EEecccccc--ccCCCceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHHHHhH
Confidence 22 778899998 6899999999876310000 0035566666532 23344433444444444443345
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcCeEee----cCCC-CC
Q 014769 311 FFCKLIDTLRESAEICYDGVKEIPCISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEESVIVT----PGIY-VG 385 (419)
Q Consensus 311 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~----~g~~-~~ 385 (419)
.+.+...++.++.+.|.+.|.+. |+.++........+++++..... + -..++++|++.||.+. |+.. ..
T Consensus 332 ~fk~Ya~qVv~NAkaLA~~L~~~-G~~vvsGgTdnHlvLvDl~~~g~----t-G~~ae~~Le~agItvNkN~iP~D~sp~ 405 (490)
T 3ou5_A 332 MFREYSLQVLKNARAMADALLER-GYSLVSGGTDNHLVLVDLRPKGL----D-GARAERVLELVSITANKNTCPGDRSAI 405 (490)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-TCEEGGGSCSSSEEEEECGGGTC----C-HHHHHHHHHHTTEECEEECCTTCCCSS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhC-CCeeecCCCCceEEEEeccccCC----C-HHHHHHHHHHcCcEECCCCCCCCCCCC
Confidence 67788889999999999999987 88866445556677777754321 2 3445677789999885 3331 11
Q ss_pred CCCeEEEEe------ecCHHHHHHHHHHHHHHHH
Q 014769 386 LKNWLRIAF------CAEPSALKDGLGRMKAFCQ 413 (419)
Q Consensus 386 ~~~~~Ris~------~~~~~~l~~~l~~l~~~~~ 413 (419)
.+..|||+. +..++++++..+.|.+++.
T Consensus 406 ~~SGiRiGTpa~TtRG~~e~dm~~IA~~I~~~l~ 439 (490)
T 3ou5_A 406 TPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp SCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred CCCeeEECCHHHHhCCCCHHHHHHHHHHHHHHHH
Confidence 256899998 2467889888888887764
No 236
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.69 E-value=2.5e-15 Score=141.28 Aligned_cols=316 Identities=11% Similarity=0.010 Sum_probs=187.9
Q ss_pred CCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCC----CCeEEeeCCCCCCcHHHHhhcCCEEEEEec
Q 014769 85 GIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARP----GANVLLPRPGWPYYEGIAQRKQVEVRHFDL 160 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~----gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~ 160 (419)
+...+.+.+..++.+..|.+ +....++++|+|.+...++.+.+++ ++.|+++..+|.++...+...|+.+++++.
T Consensus 95 ~~~~~e~~~~~~~~~~lGlp-~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~kAl~l~Gl~p~~v~~ 173 (450)
T 3bc8_A 95 LLNKITNSLVLNVIKLAGVH-SVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMVTAGFEPVVIEN 173 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTCT-TCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHHHHhCCCC-CCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHHHHHHHcCCeeEEEEe
Confidence 35567777777777766653 2345688888875554444444443 899999999999999999999999988875
Q ss_pred cC-CCCcccChHHHHHhhcC---CccEEEEeCCC-CccccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCC-C
Q 014769 161 LP-ERNWEVDLDAVEALADK---NTAAMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYT-P 234 (419)
Q Consensus 161 ~~-~~~~~~~~~~l~~~~~~---~~~~v~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~-~ 234 (419)
.+ +....+|++.|++++.+ +.+++++.+|+ +.+|.+-+ +++|+++|++||+++++|++|+.........+ .
T Consensus 174 ~~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~dd---l~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~ 250 (450)
T 3bc8_A 174 VLEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDR---LEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQ 250 (450)
T ss_dssp EEETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCC---HHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHH
T ss_pred eecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecC---HHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHH
Confidence 33 23568999999999865 24566777774 45667777 99999999999999999999986321100000 1
Q ss_pred cccc-CCCCcEEEEecCCCcCCCCCceeEEEEeeCCCCccchhhHHHHHHhhhccccCCchHHHHHHHHHHcccchHHHH
Q 014769 235 MGLF-GSIVPVITLGSISKRWLVPGWRFGWLVTNDPNGIFQKSGIIDSIKDCLSIYSDIPTFIQGAIPQILEKTKEDFFC 313 (419)
Q Consensus 235 ~~~~-~~~~~~i~~~s~sK~~~~~G~r~G~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~ 313 (419)
.... ..+ .++.|.+|++ ......+++.++++ +..+.+....... ..++++......++.. ..+.+.
T Consensus 251 a~~~~~AD---~~v~S~HK~l-~a~~~~~~l~~rd~-------~~~~~~~~~~~g~-~s~SpsL~l~~~l~~~-G~~g~~ 317 (450)
T 3bc8_A 251 GARVGRID---AFVQSLDKNF-MVPVGGAIIAGFNE-------PFIQDISKMYPGR-ASASPSLDVLITLLSL-GCSGYR 317 (450)
T ss_dssp HHHHSCCC---EEEEEHHHHH-SCCSSCEEEEESCH-------HHHHHHHHHSCSC-BCSHHHHHHHHHHHHH-HHHHHH
T ss_pred HhcccCCC---EEEECCccCC-CchhccEEEEecCH-------HHHHHHHHHhhcC-CcccHHHHHHHHHHHH-HHHHHH
Confidence 0111 122 5667999994 44555677776542 3455544332111 1122333333333332 245566
Q ss_pred HHHHHHHHHHHHHHHHhhcCC---CCCCCCCCCceEEEEeecCcccccCCCCHHHHHHHHHHhcC---eEeec-------
Q 014769 314 KLIDTLRESAEICYDGVKEIP---CISCPNKPEGSMVTMVKLNPWLLEDINDDIEFALKLAKEES---VIVTP------- 380 (419)
Q Consensus 314 ~~~~~~~~~~~~l~~~l~~~~---~~~~~~~p~~g~~~~~~~~~~~~~~~~~~~~~~~~ll~~~g---v~v~~------- 380 (419)
+..++..++.+++++.|++++ ++.+...+..+.-..+.++........|...+...+ ...| ..+.+
T Consensus 318 ~~i~~~~~~a~~l~~~l~~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~~~~D~tkl~i~~-~~~g~sG~~v~~~~~~~~~ 396 (450)
T 3bc8_A 318 KLLKERKEMFVYLSTQLKKLAEAHNERLLQTPHNPISLAMTLKTIDGHHDKAVTQLGSML-FTRQVSGARAVPLGNVQTV 396 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCBCCCTTCSSEEEEECTTTSSSSSCHHHHHHHHH-HHTTCCSCEEECSCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHhhHHhcCceecCCccCCCcceeecccccccccCCCceeEEEe-cCCCCccceeeecccccch
Confidence 666666677777777776655 665433332211111222211000001334444444 3333 33331
Q ss_pred -CC---CCC------CCCeEEEEe--ecCHHHHHHHHHHHHHHHHHHhcc
Q 014769 381 -GI---YVG------LKNWLRIAF--CAEPSALKDGLGRMKAFCQRHTKK 418 (419)
Q Consensus 381 -g~---~~~------~~~~~Ris~--~~~~~~l~~~l~~l~~~~~~~~~~ 418 (419)
|. .|+ ...++-+.+ +.+++++++++++|+++++++.++
T Consensus 397 ~~~~l~~~gi~~E~~~~~~i~~~~sig~~~~di~~l~~~L~~~~~~~~~~ 446 (450)
T 3bc8_A 397 SGHTFRGFMSHADNYPCAYLNAAAAIGMKMQDVDLFIKRLDKCLNIVRKE 446 (450)
T ss_dssp TTEEEETTTTTSSCCSSCEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHcCCeeecCCCCcEEEEecCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 01 111 134555555 578999999999999998877654
No 237
>3gh5_A HEX1, beta-hexosaminidase; beta-N-acetylhexosaminidase, glycosphingolipids, paenibacill GH20, hydrolase, structural genomics, NPPSFA; HET: NAG; 1.60A {Paenibacillus SP} PDB: 3gh4_A* 3gh7_A* 3sur_A* 3sus_A* 3sut_A* 3suu_A* 3suv_A* 3suw_A*
Probab=84.68 E-value=5 Score=38.41 Aligned_cols=114 Identities=16% Similarity=0.280 Sum_probs=69.8
Q ss_pred CCCCCCCCcEEEcccHHHHHHHHHHHhcC---C---------C-C-----eEEeeCCCCCC-------------------
Q 014769 101 LPYKLSADDVYVTLGCKQAVEVILSVLAR---P---------G-A-----NVLLPRPGWPY------------------- 143 (419)
Q Consensus 101 ~~~~~~~~~i~~t~g~~~al~~~~~~l~~---~---------g-d-----~vlv~~p~~~~------------------- 143 (419)
+.+.++++.|.|+.++..++.-.+++|.+ . | . ..+...|.|.-
T Consensus 124 Y~L~v~~~~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~g~~~~lp~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~ 203 (525)
T 3gh5_A 124 YDLITTSNQVTLTANKPEGVFRGNQTLLQLLPAGIEKNTVVSGVQWVIPHSNISDKPEYEYRGLMLDVARHFFTVDEVKR 203 (525)
T ss_dssp EEEEECSSEEEEEESSHHHHHHHHHHHHHHSCTTTTCSSCCCSCCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHH
T ss_pred eEEEEeCCEEEEEECCHHHHHHHHHHHHHHHhhhccccccccCcceeccceEEeecCCcceeccccCCCCCCCCHHHHHH
Confidence 33456677898988877777766666532 1 1 1 13455666641
Q ss_pred cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 144 YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 144 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+.+.+..+++++..+.+..+.+|.+..+...++-..... .....+.|-.++.+++++|++.|+++++-||-
T Consensus 204 ~id~mA~~KlN~lH~HltDdqgwriei~~~P~Lt~~Ga~----~~~~~~~~g~YT~~di~eIv~YA~~rgI~VIP 274 (525)
T 3gh5_A 204 QIDLASQYKINKFHMHLSDDQGWRIEIKSWPDLIEIGSK----GQVGGGPGGYYTQEQFKDIVSYAAERYIEVIP 274 (525)
T ss_dssp HHHHHHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHcCCcEEEEEeccCCccccccccchhhhhccCc----cccCCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 134455567777777777666777665544332211110 00112345679999999999999999987663
No 238
>1oft_A SULA, hypothetical protein PA3008; bacterial cell division inhibitor, FTSZ, SULA protein; 2.9A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=83.93 E-value=12 Score=29.31 Aligned_cols=102 Identities=9% Similarity=0.032 Sum_probs=63.9
Q ss_pred cEEEcccHHHHHHHHHHH---hcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 109 DVYVTLGCKQAVEVILSV---LAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~---l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
+|+....+...+..++-. +.. .+..|+...|-+..+...+...|++...+-+....+..-.+..++++++.....
T Consensus 48 Ell~~~~g~gel~LL~P~La~l~~~~~~r~vlwI~Pp~~l~~~~L~~~Gl~~~rll~v~~~~~~daLwa~EqALrsG~~~ 127 (161)
T 1oft_A 48 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH 127 (161)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHHTCSSSSEEEEESCCTTSCHHHHHHTTCCGGGEEEECCSSTTHHHHHHHHHHHTTCEE
T ss_pred EEccCCCcHHHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCCHHHEEEEECCChHHHHHHHHHHHhcCCcc
Confidence 566554444444433333 332 567788888888889999999997643222221112122356678889888877
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (419)
+++..+.. ++..+++++---++..+..
T Consensus 128 aVl~Wl~~-----l~~~~~RRLqlAAe~g~~~ 154 (161)
T 1oft_A 128 TVVSWLEP-----LSRAARKQLSRAAQLGQAQ 154 (161)
T ss_dssp EEEECCSS-----CCHHHHHHHHHHHHHTTCE
T ss_pred EEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence 78877542 6777788888777776654
No 239
>1ofu_X SULA, hypothetical protein PA3008; bacterial cell division inhibitor, SULA protein; HET: GDP; 2.1A {Pseudomonas aeruginosa} SCOP: c.37.1.22
Probab=82.23 E-value=8.4 Score=28.56 Aligned_cols=102 Identities=9% Similarity=0.015 Sum_probs=63.9
Q ss_pred cEEEcccHHHHHHHHHH---HhcC--CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 109 DVYVTLGCKQAVEVILS---VLAR--PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~---~l~~--~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
+++....+...+..++- .+.+ .+..|+...|.+..+...+...|++...+-+....+..-.+..++++++.....
T Consensus 6 Ell~~~~g~~e~~lLlp~L~~l~~~~~~r~ilwi~pp~~~~~~~L~~~Gl~~~rll~v~~~~~~d~lwa~EqaLrsg~~~ 85 (119)
T 1ofu_X 6 ELSLSGLPGHCLTLLAPILRELSEEQDARWLTLIAPPASLTHEWLRRAGLNRERILLLQAKDNAAALALSCEALRLGRSH 85 (119)
T ss_dssp EEEEESCHHHHHHHHHHHHHHHTTCSSSSEEEEESCCTTSCHHHHHHTTCCTTSEEEECCSSHHHHHHHHHHHHHHTCEE
T ss_pred EEeecCCCccHHHHHHHHHHHhcccccCccEEEECCCCCCCHHHHHHcCCChHHEEEEECCCcHHHHHHHHHHHhcCCcc
Confidence 44554444444444443 3443 567788888888889999998997643322222222122356678888887777
Q ss_pred EEEeCCCCccccCCCHHHHHHHHHHHHhCCCe
Q 014769 184 MVIINPGNPCGNVFTYHHLQEIAEMARKLRVM 215 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~ 215 (419)
+++..+.. ++..+.+++--.+++.+..
T Consensus 86 aVl~wl~~-----l~~~~~RRLqlAA~~g~~~ 112 (119)
T 1ofu_X 86 TVVSWLEP-----LSRAARKQLSRAAQLGQAQ 112 (119)
T ss_dssp EEEECCSS-----CCHHHHHHHHHHHHHHTCE
T ss_pred EEEECCCc-----CChHHHHHHHHHHHhCCCe
Confidence 77777543 6777788888777776654
No 240
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=77.66 E-value=7.5 Score=37.15 Aligned_cols=111 Identities=20% Similarity=0.304 Sum_probs=64.6
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcC---C---------CC-----eEEeeCCCCCC-------------------cHHH
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLAR---P---------GA-----NVLLPRPGWPY-------------------YEGI 147 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~---~---------gd-----~vlv~~p~~~~-------------------~~~~ 147 (419)
.++.+.|.|+.++..++.-.+++|.+ . +. ..+...|.|.- +.+.
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTL~Ql~~~~~~~~~~~~~~~~lp~~~I~D~Prf~~RG~mLD~aR~f~~~~~ik~~id~ 182 (512)
T 1jak_A 103 DSGPAGVTITARKAAGLFHGVQTLRQLLPPAVEKDSAQPGPWLVAGGTIEDTPRYAWRSAMLDVSRHFFGVDEVKRYIDR 182 (512)
T ss_dssp EEETTEEEEEESSHHHHHHHHHHHHHHSCGGGGCSSCCCCCCEECCEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCHHHHHHHHHHHHHHhhhhhcccccccCcccccceEEeecCCCCccceeeccCCCCCCHHHHHHHHHH
Confidence 35566788887777666666665532 1 11 12444566541 1233
Q ss_pred HhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 148 AQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 148 ~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+...++++..+.+..+.+|.+.++...++...... .......|-.++.+++++|++.|+++++-||-
T Consensus 183 ma~~KlN~lh~HltDdq~wriei~~~P~Lt~~ga~----~~~~~~~~g~YT~~di~eiv~yA~~rgI~VIP 249 (512)
T 1jak_A 183 VARYKYNKLHLHLSDDQGWRIAIDSWPRLATYGGS----TEVGGGPGGYYTKAEYKEIVRYAASRHLEVVP 249 (512)
T ss_dssp HHTTTCCEEEEECBCSSCBCBCCTTSTHHHHTTTS----CCTTSSCCCCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEEEEeccCCCceehhhhhHHHHhhcCc----cccCCCCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 45556777777766655666655443332111110 01112236679999999999999999998774
No 241
>2gjx_A Beta-hexosaminidase alpha chain; beta-hexosaminidase A, glycosidase, TAY-sachs disease, GM2 ganglisode, TIM barrel, hydrolase; HET: NAG BMA NDG; 2.80A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 2gk1_A*
Probab=73.71 E-value=9.7 Score=36.33 Aligned_cols=107 Identities=18% Similarity=0.266 Sum_probs=63.1
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcC----C--CC-----eEEeeCCCCCC-------------------cHHHHhhcCC
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLAR----P--GA-----NVLLPRPGWPY-------------------YEGIAQRKQV 153 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~----~--gd-----~vlv~~p~~~~-------------------~~~~~~~~g~ 153 (419)
.++++.|.|+.++..++.-.+++|.+ . |. ..+...|.|.- +.+.+..+++
T Consensus 97 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~mA~~Kl 176 (507)
T 2gjx_A 97 TINDDQCLLLSETVWGALRGLETFSQLVWKSAEGTFFINKTEIEDFPRFPHRGLLLDTSRHYLPLSSILDTLDVMAYNKL 176 (507)
T ss_dssp EESSSCEEEEESSHHHHHHHHHHHHHHEEECTTCCEEEECEEEEECCSCSEEEEEEETTTSCCCHHHHHHHHHHHHHTTC
T ss_pred EEeCCeEEEEECCHHHHHHHHHHHHHHhhhccCCceeeccEEEeecCCcceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 35566788887777776666666532 1 11 12344565531 1234455567
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
++..+.+..+.+|.+..+.+.++.... ...|.+..++.+++++|++.|+++++-||-
T Consensus 177 N~lh~HltDdq~wr~ei~~~P~Lt~~G--------a~~~~~~~YT~~di~eiv~yA~~rgI~VIP 233 (507)
T 2gjx_A 177 NVFHWHLVDDPSFPYESFTFPELMRKG--------SYNPVTHIYTAQDVKEVIEYARLRGIRVLA 233 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCTHHHHHH--------SSCTTTSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred ceEEEEEecccCeeeeccccchhhhcc--------ccCCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 777776655556665543222111000 012345679999999999999999987774
No 242
>1now_A Beta-hexosaminidase beta chain; (beta/alpha)8-barrel, homodimer, family 20 glycosidase, HYDR; HET: NAG IFG; 2.20A {Homo sapiens} SCOP: c.1.8.6 d.92.2.1 PDB: 1nou_A* 1np0_A* 2gjx_B* 3lmy_A* 1o7a_A* 2gk1_B*
Probab=67.01 E-value=9.7 Score=36.33 Aligned_cols=106 Identities=11% Similarity=0.155 Sum_probs=62.3
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcC----CC-Ce------EEeeCCCCCC-------------------cHHHHhhcCC
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLAR----PG-AN------VLLPRPGWPY-------------------YEGIAQRKQV 153 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~----~g-d~------vlv~~p~~~~-------------------~~~~~~~~g~ 153 (419)
.++++.|.|+..+..++.-.+++|.+ .+ .. .+...|.|.- +.+.+..+++
T Consensus 103 ~v~~~~i~I~a~~~~G~~~g~qTl~QL~~~~~~~~~~ip~~~I~D~P~f~~RG~mlD~aR~f~~~~~ik~~id~ma~~Kl 182 (507)
T 1now_A 103 LVKEPVAVLKANRVWGALRGLETFSQLVYQDSYGTFTINESTIIDSPRFSHRGILIDTSRHYLPVKIILKTLDAMAFNKF 182 (507)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHHHHCEECTTSCEEEEEEEEEECCSCSEEEEEEESSSSCCCHHHHHHHHHHHHHTTC
T ss_pred EEcCCeEEEEECCHHHHHHHHHHHHHHHhhccCceEEeccEEEEecCccceeeeeeccCCCCCCHHHHHHHHHHHHHhCC
Confidence 45667788887777777666666532 11 11 2344565531 1233455566
Q ss_pred EEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 154 EVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
++..+.+..+.+|.+..+...++..... ..| |-.++.+++++|++.|+++++-||-
T Consensus 183 N~lh~HltDdq~wr~e~~~~P~Lt~~Ga--------~~~-~~~YT~~di~eiv~yA~~rgI~VIP 238 (507)
T 1now_A 183 NVLHWHIVDDQSFPYQSITFPELSNKGS--------YSL-SHVYTPNDVRMVIEYARLRGIRVLP 238 (507)
T ss_dssp CEEEEECCCSSCCCBCCSSCHHHHHHHS--------SST-TSCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred cEEEEeeccCccceeeccchhhhhcccC--------cCC-CCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 7666666555556555433222211000 012 5679999999999999999987763
No 243
>3rcn_A Beta-N-acetylhexosaminidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta half sandwich; HET: MSE; 2.51A {Arthrobacter aurescens}
Probab=66.68 E-value=11 Score=36.27 Aligned_cols=117 Identities=17% Similarity=0.334 Sum_probs=70.5
Q ss_pred CCCCCCCCcEEEcccHHHHHHHHHHHhcC--C-----------CC------eEEeeCCCCCC------------------
Q 014769 101 LPYKLSADDVYVTLGCKQAVEVILSVLAR--P-----------GA------NVLLPRPGWPY------------------ 143 (419)
Q Consensus 101 ~~~~~~~~~i~~t~g~~~al~~~~~~l~~--~-----------gd------~vlv~~p~~~~------------------ 143 (419)
+.+.+ ++.|.|+.++..+++-.+++|.+ + |. ..+...|.|.-
T Consensus 80 Y~L~v-~~~i~I~a~~~~G~f~glqTL~QLl~~~~~~~~~~~~~~~~~ip~~~I~D~Prf~~RG~mLDvsRhf~~~~~ik 158 (543)
T 3rcn_A 80 YRLEV-SDAVVISAGGAAGAFYGAQTLLQLLGPAALRQAPVVAVEGWSVPRVSVEDKPRFGYRGTMLDVARHFMPKDNVL 158 (543)
T ss_dssp EEEEE-SSSEEEEESSHHHHHHHHHHHHHHHCGGGGSSSCCSCCSCEEEEEEEEEECCSCSEEEEEEETTTSCCCHHHHH
T ss_pred eEEEE-CCeEEEEECCHHHHHHHHHHHHHHHhhhcccccccccCcceeccCEEEEecCCCCccccccccCCCccCHHHHH
Confidence 33456 77899988777776666666532 1 21 12444566641
Q ss_pred -cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-----CCccEEEE-e--CCCCccccCCCHHHHHHHHHHHHhCCC
Q 014769 144 -YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-----KNTAAMVI-I--NPGNPCGNVFTYHHLQEIAEMARKLRV 214 (419)
Q Consensus 144 -~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-----~~~~~v~i-~--~p~nptG~~~~~~~l~~i~~~~~~~~~ 214 (419)
+.+.+..+.+++..+.+..+.+|.+.++...++-. ..+..--. . .-..|.|-.++.+++++|++.|+++++
T Consensus 159 ~~ID~MA~~KlN~lH~HltDdqgwriei~~yP~Lt~~Ga~r~~t~~g~~~~~~~~~~~~~g~YT~~di~eIv~YA~~rgI 238 (543)
T 3rcn_A 159 RFIEVMAMHKLNVLHLHLTDDQGWRMQINRYPKLTETGAWRRESSLGSWRAGVFDGRPHGGFYTQDDLREIVAFAADRHI 238 (543)
T ss_dssp HHHHHHHHTTCCEEEEECEETTEECBCCSSCTHHHHTTTEESCCBSSCGGGCCBCCCCEECCBCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcCCcEEEeecccccCcchhcccchhhhhhccccccccccccccccccCCccCCCcCHHHHHHHHHHHHHcCC
Confidence 13455666788888888777777776554433211 11100000 0 012345778999999999999999998
Q ss_pred eEEE
Q 014769 215 MVVA 218 (419)
Q Consensus 215 ~li~ 218 (419)
-||=
T Consensus 239 ~VIP 242 (543)
T 3rcn_A 239 TVIP 242 (543)
T ss_dssp EEEE
T ss_pred EEee
Confidence 7763
No 244
>2yvq_A Carbamoyl-phosphate synthase; conserved hypothetical protein, structural genomics, NPPSFA; 1.98A {Homo sapiens}
Probab=65.78 E-value=42 Score=25.57 Aligned_cols=104 Identities=12% Similarity=0.122 Sum_probs=62.3
Q ss_pred cEEEcccH--HHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEE
Q 014769 109 DVYVTLGC--KQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (419)
Q Consensus 109 ~i~~t~g~--~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 186 (419)
.++++-+- ...+.-+.+.+..-|=+++....+ ...++..|+++..+.-..+++..-+...+.+.+..+..-++|
T Consensus 26 gvliSv~d~dK~~l~~~a~~l~~lGf~i~AT~GT----a~~L~~~Gi~v~~v~k~~egg~~~~~~~i~d~i~~g~i~lVI 101 (143)
T 2yvq_A 26 GILIGIQQSFRPRFLGVAEQLHNEGFKLFATEAT----SDWLNANNVPATPVAWPSQEGQNPSLSSIRKLIRDGSIDLVI 101 (143)
T ss_dssp EEEEECCGGGHHHHHHHHHHHHTTTCEEEEEHHH----HHHHHHTTCCCEEECCGGGC-----CBCHHHHHHTTSCCEEE
T ss_pred CEEEEecccchHHHHHHHHHHHHCCCEEEECchH----HHHHHHcCCeEEEEEeccCCCcccccccHHHHHHCCCceEEE
Confidence 36666554 555555666776667777766533 345566788877775333221100102345556556666677
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEc
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVAD 219 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~D 219 (419)
+.|.. . ..+..+-..|.+.|-++++.++..
T Consensus 102 nt~~~-~--~~~~~d~~~iRR~Av~~~IP~~T~ 131 (143)
T 2yvq_A 102 NLPNN-N--TKFVHDNYVIRRTAVDSGIPLLTN 131 (143)
T ss_dssp ECCCC-C--GGGHHHHHHHHHHHHHTTCCEECS
T ss_pred ECCCC-C--CcCCccHHHHHHHHHHhCCCeEcC
Confidence 76643 1 233677889999999999988754
No 245
>1c7s_A Beta-N-acetylhexosaminidase; glycosyl hydrolase, chitinolysis, A/B(TIM)-barrel, site directed mutagenesis; HET: CBS; 1.80A {Serratia marcescens} SCOP: b.1.18.2 b.2.2.3 c.1.8.6 d.92.2.1 PDB: 1c7t_A* 1qba_A 1qbb_A*
Probab=61.62 E-value=15 Score=37.45 Aligned_cols=115 Identities=17% Similarity=0.285 Sum_probs=67.5
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcC---C-CC-e----EEeeCCCCCC-------------------cHHHHhhcCCEE
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLAR---P-GA-N----VLLPRPGWPY-------------------YEGIAQRKQVEV 155 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~---~-gd-~----vlv~~p~~~~-------------------~~~~~~~~g~~~ 155 (419)
.++++.|.|+.++..+++-.+++|.+ . +. . .+...|.|.- +.+.+..+.+++
T Consensus 265 ~v~~~~i~I~a~~~~G~fyglqTL~QLl~~~~~~~ip~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~Id~mA~~KlN~ 344 (858)
T 1c7s_A 265 KIGKKEAQVIGFDQAGVFYGLQSILSLVPSDGSGKIATLDASDAPRFPYRGIFLDVARNFHKKDAVLRLLDQMAAYKLNK 344 (858)
T ss_dssp EECSSCEEEEESSHHHHHHHHHHHHHHSCTTSCCEEEEEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCE
T ss_pred EEeCCeEEEEEecccceeHHHHHHHHHhhhcCCccccceEEEeCCCcceeeeeecCCCCCCCHHHHHHHHHHHHHhCCcE
Confidence 35566888887777766666666532 2 22 1 2344566641 134456667888
Q ss_pred EEEeccCCCCcccChHHHHHhhcCCccEE------EEeCC---C--CccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 156 RHFDLLPERNWEVDLDAVEALADKNTAAM------VIINP---G--NPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v------~i~~p---~--nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
..+.+..+.+|.+.++.+.++.......- -...| + .+.|-.++.+++++|++.|+++++-||-
T Consensus 345 lh~HltDdqgwriei~~yP~Lt~~Ga~r~~~~~~~~~~~p~~g~~~~~~~g~YT~~direIv~YA~~rgI~VIP 418 (858)
T 1c7s_A 345 FHFHLSDDEGWRIEIPGLPELTEVGGQRCHDLSETTCLLPQYGQGPDVYGGFFSRQDYIDIIKYAQARQIEVIP 418 (858)
T ss_dssp EEEECEETTEECBCCTTCTHHHHTTTEECSCTTCSSSBCCCTTCCSSCEECCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred EEEEeccCccccccccCCchhhhccccccccccccccccccccCCCCccCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 88877666677776554333211000000 00011 1 1346689999999999999999987663
No 246
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=58.61 E-value=37 Score=29.25 Aligned_cols=99 Identities=11% Similarity=0.062 Sum_probs=58.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----C
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----N 180 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 180 (419)
+..-++||.+++..=..+...|.+.|-.|++..-.-......++..|.+...+.+|-. |.+++++.++. .
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSA-----NLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCC-----CHHHHHHHHHHHHHHcC
Confidence 3445677777666667777888889988887654333334455556767666665432 44444443322 2
Q ss_pred ccEEEEeCCC-Ccccc--CCCHHHHHHHHHHH
Q 014769 181 TAAMVIINPG-NPCGN--VFTYHHLQEIAEMA 209 (419)
Q Consensus 181 ~~~v~i~~p~-nptG~--~~~~~~l~~i~~~~ 209 (419)
..-++++|.. ++.+- -++.++|+++.++-
T Consensus 103 ~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vN 134 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRN 134 (273)
T ss_dssp CEEEEEECCCCCCCCCTTSCCHHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhccHHHHHHHHHHH
Confidence 3335556552 23222 36888888888753
No 247
>3ozo_A N-acetylglucosaminidase; beta-N-acetyl-D-hexosaminidase, hydrolase-hydrolase inhibito; HET: NGT; 2.00A {Ostrinia furnacalis} PDB: 3nsn_A* 3nsm_A* 3ozp_A* 3s6t_A* 3vtr_A*
Probab=58.44 E-value=34 Score=33.09 Aligned_cols=100 Identities=13% Similarity=0.151 Sum_probs=58.9
Q ss_pred cEEEcccHHHHHHHHHHHhcC----C--CC-------eEEeeCCCCCC-------------------cHHHHhhcCCEEE
Q 014769 109 DVYVTLGCKQAVEVILSVLAR----P--GA-------NVLLPRPGWPY-------------------YEGIAQRKQVEVR 156 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~----~--gd-------~vlv~~p~~~~-------------------~~~~~~~~g~~~~ 156 (419)
.|.++.++..++.-.+++|.+ . +. ..+...|.|.- +.+.+..+.+++.
T Consensus 142 ~i~I~a~~~~G~~~glqTL~QLl~~~~~~~~~~~~p~~~I~D~Prf~~RG~mLDvsR~f~~~~~ik~~id~mA~~KlN~l 221 (572)
T 3ozo_A 142 NATITANSFFGMRHGLETLSQLFVFDDIRDHLLMVRDVNISDKPVYPYRGILLDTARNYYSIESIKRTIEAMAAVKLNTF 221 (572)
T ss_dssp EEEEEESSHHHHHHHHHHHHTTEEEETTTTEEEEESSEEEEECCSCSEEEEEEECSSSCCCHHHHHHHHHHHHHTTCCEE
T ss_pred EEEEEECCHHHHHHHHHHHHHHHhhccccccccccCceeEEecCCCccccceeccCCCCCCHHHHHHHHHHHHHcCCceE
Confidence 367777777777666666643 1 11 12445566541 1234455566777
Q ss_pred EEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 157 HFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 157 ~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
.+.+..+.+|.+..+...++-... ....+..++.+++++|++.|+++++-||
T Consensus 222 H~HltDdqgwrlei~~~P~Lt~~G---------a~~~~~~YT~~di~eiv~yA~~rgI~VI 273 (572)
T 3ozo_A 222 HWHITDSQSFPFVTTKRPNLYKFG---------ALSPQKVYTKAAIREVVRFGLERGVRVL 273 (572)
T ss_dssp EEECCCSSCCCBCCSSSHHHHHHH---------SSSSSSCBCHHHHHHHHHHHHHTTCEEE
T ss_pred EEEeecCcCceeccccCcchhccC---------CcCCCCCcCHHHHHHHHHHHHHhCCcee
Confidence 777665556665544332221100 0113457999999999999999998766
No 248
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=56.94 E-value=86 Score=28.72 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=32.2
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEee
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLP 137 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~ 137 (419)
|.|..+-.+.-.+|.+....+.-....++||.+++..=..+...|.. .|..|++.
T Consensus 23 p~gc~~~v~~qi~~~~~~~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 23 PTGCEANVKKQIDYVTTEGPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEE
T ss_pred CHHHHHHHHHHHHHHHhcCCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEE
Confidence 45666655555567766444333444566666555444555666777 78877654
No 249
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=52.18 E-value=78 Score=26.51 Aligned_cols=56 Identities=23% Similarity=0.058 Sum_probs=28.0
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
....++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 61 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNAD 61 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcc
Confidence 34456777666665566677777888888776544333333334445455555554
No 250
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=50.72 E-value=76 Score=27.09 Aligned_cols=97 Identities=15% Similarity=0.138 Sum_probs=52.6
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (419)
++...++||.++...=..+...|.+.|..|++..-.-..........+.++..+.+|-. |.+.+++++..
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 99 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVS-----SAKDAESMVEKTTAKW 99 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCC-----CHHHHHHHHHHHHHHc
Confidence 34456777776666556677778788988877654332233344445656666665432 44554444331
Q ss_pred -CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 -NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 -~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+.. +++.+.. .+.+ ...+.++++++.+
T Consensus 100 g~iD-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (277)
T 4dqx_A 100 GRVD-VLVNNAGFGTTGNVVTIPEETWDRIMS 130 (277)
T ss_dssp SCCC-EEEECCCCCCCBCTTTSCHHHHHHHHH
T ss_pred CCCC-EEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 233 4444442 2222 2357777776665
No 251
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=50.46 E-value=64 Score=26.96 Aligned_cols=96 Identities=19% Similarity=0.144 Sum_probs=51.9
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------N 180 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 180 (419)
...++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|-. |.+.+++.++. +
T Consensus 6 gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g~ 80 (247)
T 3rwb_A 6 GKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADIS-----DPGSVKALFAEIQALTGG 80 (247)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTT-----CHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCC-----CHHHHHHHHHHHHHHCCC
Confidence 345777766666556667777788988887654433333444444656666655422 44554444331 2
Q ss_pred ccEEEEeCC-CCcccc--CCCHHHHHHHHHH
Q 014769 181 TAAMVIINP-GNPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 181 ~~~v~i~~p-~nptG~--~~~~~~l~~i~~~ 208 (419)
.. +++.+. ..+.+. ..+.+++++..+.
T Consensus 81 id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 110 (247)
T 3rwb_A 81 ID-ILVNNASIVPFVAWDDVDLDHWRKIIDV 110 (247)
T ss_dssp CS-EEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 33 344443 222222 3577777766653
No 252
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=49.60 E-value=88 Score=26.58 Aligned_cols=54 Identities=11% Similarity=-0.034 Sum_probs=33.8
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
..++||.|+...=..+...|.+.|.+|++..-.-..........+..+..+.+|
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 59 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLD 59 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECC
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEee
Confidence 456777666555556667777889888876554444445555555556666654
No 253
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=48.56 E-value=1.2e+02 Score=25.40 Aligned_cols=99 Identities=13% Similarity=0.098 Sum_probs=57.9
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEE-e--eCC------CC-----CCcHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVL-L--PRP------GW-----PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vl-v--~~p------~~-----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (419)
-+++.+||..+..++..+.. .|-.|. + ..| .| ......++.+|++...+++.... .-..+++.
T Consensus 7 vvvl~SGGkDSs~al~~l~~-~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~--~~e~e~l~ 83 (237)
T 3rjz_A 7 VAVLYSGGKDSNYALYWAIK-NRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEK--EKEVEDLK 83 (237)
T ss_dssp EEEECCSSHHHHHHHHHHHH-TTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC--------CHHHHH
T ss_pred EEEEecCcHHHHHHHHHHHH-cCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCc--hHHHHHHH
Confidence 46777888888877776654 454442 2 111 11 11345678889988877764321 22366777
Q ss_pred HhhcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEE
Q 014769 175 ALADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVV 217 (419)
Q Consensus 175 ~~~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 217 (419)
++++. ....++ +|.+.+......+-+.|.+.|+..+
T Consensus 84 ~~l~~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 84 RVLSGLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp HHHTTSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred HHHHhcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 77654 223333 6888887888888899999887665
No 254
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=48.45 E-value=62 Score=27.37 Aligned_cols=100 Identities=16% Similarity=0.053 Sum_probs=58.9
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCC-CCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccE
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAA 183 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 183 (419)
++...++||.+++..=..+...|.+.|-.|++..-.- ......+...|.+...+.+|-. |.+.++..+.....-
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIAKDGGNASALLIDFA-----DPLAAKDSFTDAGFD 81 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----STTTTTTSSTTTCCC
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhCCcEEEEEccCC-----CHHHHHHHHHhCCCC
Confidence 4445667777777666777788888998887764321 1223445666777777776532 223333344333333
Q ss_pred EEEeCCC-Cccc--cCCCHHHHHHHHHHH
Q 014769 184 MVIINPG-NPCG--NVFTYHHLQEIAEMA 209 (419)
Q Consensus 184 v~i~~p~-nptG--~~~~~~~l~~i~~~~ 209 (419)
++++|.. .+.+ .-++.++|+++.++-
T Consensus 82 iLVNNAGi~~~~~~~~~~~~~w~~~~~vN 110 (247)
T 4hp8_A 82 ILVNNAGIIRRADSVEFSELDWDEVMDVN 110 (247)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccccHHHHHHHHHHH
Confidence 5666652 2222 246888898888753
No 255
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=48.05 E-value=1.1e+02 Score=25.82 Aligned_cols=100 Identities=16% Similarity=0.041 Sum_probs=53.4
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC--cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY--YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--- 178 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--- 178 (419)
.++..-++||.+++..=..+...|.+.|-.|++..-.-.. ........+.+...+.+|-. |.+.+++.+.
T Consensus 4 ~L~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~ 78 (258)
T 4gkb_A 4 NLQDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQ-----DDAQCRDAVAQTI 78 (258)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecC-----CHHHHHHHHHHHH
Confidence 3444556666666555566677788888777765432222 12223444666666666432 3344433332
Q ss_pred -C-CccEEEEeCCC--CccccCCCHHHHHHHHHH
Q 014769 179 -K-NTAAMVIINPG--NPCGNVFTYHHLQEIAEM 208 (419)
Q Consensus 179 -~-~~~~v~i~~p~--nptG~~~~~~~l~~i~~~ 208 (419)
. ...-++++|.. .+...-.+.++|++..++
T Consensus 79 ~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~v 112 (258)
T 4gkb_A 79 ATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLER 112 (258)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHH
T ss_pred HHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHH
Confidence 1 22335555552 233345677788777654
No 256
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=43.11 E-value=95 Score=26.04 Aligned_cols=97 Identities=10% Similarity=0.059 Sum_probs=50.8
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----C
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----N 180 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 180 (419)
....++||.++...=..+...|.+.|.+|++..-.-..........+..+..+.+|-. |.+.+++.+.. .
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVT-----RQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTT-----CHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCC-----CHHHHHHHHHHHHHHcC
Confidence 3345777777666556667777788988877654333333344444555556655432 44544444321 1
Q ss_pred ccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 181 TAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 181 ~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
..-+++.+.. .+.+ ...+.+++++..+
T Consensus 82 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (259)
T 4e6p_A 82 GLDILVNNAALFDLAPIVEITRESYEKLFA 111 (259)
T ss_dssp SCCEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 2223444432 2222 2356677766554
No 257
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=42.95 E-value=93 Score=26.03 Aligned_cols=57 Identities=16% Similarity=-0.000 Sum_probs=34.5
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
++...++||.++...=..+...|.+.|.+|++..-.-..........+..+..+.+|
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 63 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAAD 63 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEec
Confidence 344567777766665566677777788888776543333334444456566666654
No 258
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=42.90 E-value=85 Score=26.59 Aligned_cols=56 Identities=21% Similarity=0.057 Sum_probs=35.0
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
....++||.++...=..+...|.+.|..|++..-.-..........+.++..+.+|
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 81 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSAN 81 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEee
Confidence 34567777766665566677787888888776543333334445556667776654
No 259
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=42.78 E-value=93 Score=26.08 Aligned_cols=98 Identities=16% Similarity=0.137 Sum_probs=53.1
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----C
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----N 180 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 180 (419)
....++||.++...=..+...|.+.|.+|++..-.-.......+..+.++..+.+|-. |.+.+++.+.. .
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIA-----DLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCC-----CHHHHHHHHHHHHHHhC
Confidence 3456777777666666677778888988877654333333344444556666665432 44444443321 2
Q ss_pred ccEEEEeCCC-Cccc--cCCCHHHHHHHHHH
Q 014769 181 TAAMVIINPG-NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 181 ~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 208 (419)
..-+++.+.. .+.+ ...+.+++++..++
T Consensus 82 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 112 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFDQVSEASYDRQFAV 112 (255)
T ss_dssp SEEEEEECCCCCCCBCGGGCCHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 2334555442 2222 13477777776653
No 260
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=42.35 E-value=1.5e+02 Score=24.91 Aligned_cols=97 Identities=22% Similarity=0.107 Sum_probs=52.8
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----C
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----N 180 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~ 180 (419)
....++||.|+...=..+...|.+.|.+|++..-.-..........+.++..+.+|-. |.+.+++.++. .
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLT-----NEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCC-----CHHHHHHHHHHHHHHcC
Confidence 3445777776666556667778788988887765544444555555655666655422 44444444331 1
Q ss_pred ccEEEEeCCC-C-c-cc--cCCCHHHHHHHHH
Q 014769 181 TAAMVIINPG-N-P-CG--NVFTYHHLQEIAE 207 (419)
Q Consensus 181 ~~~v~i~~p~-n-p-tG--~~~~~~~l~~i~~ 207 (419)
..-+++.+.. . + .+ ...+.+++++..+
T Consensus 85 ~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 116 (271)
T 3tzq_B 85 RLDIVDNNAAHSDPADMLVTQMTVDVWDDTFT 116 (271)
T ss_dssp CCCEEEECCCCCCTTCCCGGGCCHHHHHHHHH
T ss_pred CCCEEEECCCCCCCCCCccccCCHHHHHHHHH
Confidence 2224444442 1 2 11 1356677766654
No 261
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=42.34 E-value=80 Score=26.99 Aligned_cols=96 Identities=15% Similarity=0.080 Sum_probs=50.6
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------C
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------N 180 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~ 180 (419)
...++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|-. |.+.+++.++. +
T Consensus 29 gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~ 103 (277)
T 3gvc_A 29 GKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVS-----DEQQIIAMVDACVAAFGG 103 (277)
T ss_dssp TCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTT-----CHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCC-----CHHHHHHHHHHHHHHcCC
Confidence 345677766665556667777788888877653332333344444556666665432 44444443321 2
Q ss_pred ccEEEEeCCC-Ccccc--CCCHHHHHHHHHH
Q 014769 181 TAAMVIINPG-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 181 ~~~v~i~~p~-nptG~--~~~~~~l~~i~~~ 208 (419)
.. +++.+.. .+.+. ..+.+++++..++
T Consensus 104 iD-~lvnnAg~~~~~~~~~~~~~~~~~~~~v 133 (277)
T 3gvc_A 104 VD-KLVANAGVVHLASLIDTTVEDFDRVIAI 133 (277)
T ss_dssp CC-EEEECCCCCCCBCTTTCCHHHHHHHHHH
T ss_pred CC-EEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 33 3444432 22221 3567777766543
No 262
>1bqc_A Protein (beta-mannanase); glycosyl hydrolase, family 5, thermomonospora fusca; 1.50A {Thermobifida fusca} SCOP: c.1.8.3 PDB: 2man_A* 3man_A*
Probab=42.28 E-value=47 Score=28.87 Aligned_cols=23 Identities=4% Similarity=0.229 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De 220 (419)
+.+.++++++.|.++|+.+|+|-
T Consensus 63 ~~~~ld~~v~~a~~~Gi~Vild~ 85 (302)
T 1bqc_A 63 GPSDVANVISLCKQNRLICMLEV 85 (302)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEe
Confidence 45789999999999999999984
No 263
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=41.69 E-value=47 Score=28.61 Aligned_cols=79 Identities=27% Similarity=0.196 Sum_probs=44.9
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-ccEE
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-TAAM 184 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v 184 (419)
....++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|-. |.+.+++++..- ..-+
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQ-----DLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTT-----CHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCC-----CHHHHHHHHHhcCCCCE
Confidence 3456777777666556667777788888877643322233344444556676665432 566666665532 2234
Q ss_pred EEeCC
Q 014769 185 VIINP 189 (419)
Q Consensus 185 ~i~~p 189 (419)
++.+.
T Consensus 90 lv~nA 94 (291)
T 3rd5_A 90 LINNA 94 (291)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 44443
No 264
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=41.60 E-value=1.8e+02 Score=25.50 Aligned_cols=53 Identities=13% Similarity=0.114 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVT---LGCKQAVEVILSVLARPGANVLLPRPGWP 142 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~ 142 (419)
.+=|..+.+...+.-+ +.--|++. +++.+++..+-.+-...-|.|++..|.|+
T Consensus 63 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~ 118 (318)
T 3qfe_A 63 REERAQLIATARKAVG---PDFPIMAGVGAHSTRQVLEHINDASVAGANYVLVLPPAYF 118 (318)
T ss_dssp HHHHHHHHHHHHHHHC---TTSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCCC-
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 4455555555443211 11235553 34566666655444333499999999775
No 265
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=40.62 E-value=1.1e+02 Score=26.00 Aligned_cols=99 Identities=19% Similarity=0.136 Sum_probs=56.5
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD--- 178 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~--- 178 (419)
++...+++|.+++..=..+...|.+.|.+|++..-.-.... ..+...|.++..+.+|-. |.+.+++.++
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~-----~~~~v~~~~~~~~ 81 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVT-----DELAIEAAFSKLD 81 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCC-----CHHHHHHHHHHHH
Confidence 44556777777777667777888889988887653222111 223445667776665432 3444444332
Q ss_pred -C-CccEEEEeCCC-Ccccc--CCCHHHHHHHHHH
Q 014769 179 -K-NTAAMVIINPG-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 179 -~-~~~~v~i~~p~-nptG~--~~~~~~l~~i~~~ 208 (419)
. ...-++++|.. ++.+- -++.++|+++.++
T Consensus 82 ~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~v 116 (255)
T 4g81_D 82 AEGIHVDILINNAGIQYRKPMVELELENWQKVIDT 116 (255)
T ss_dssp HTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHH
Confidence 2 22335555552 22222 3688888888764
No 266
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=40.26 E-value=94 Score=25.41 Aligned_cols=94 Identities=13% Similarity=0.037 Sum_probs=50.1
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---CccEEE
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---NTAAMV 185 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~v~ 185 (419)
.++||.|+...=..+...|.+.|..|++..-.-..........+.++..+.+|- -+.+.+++.+.. .... +
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~d~-l 76 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDL-----ASHQEVEQLFEQLDSIPST-V 76 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCT-----TCHHHHHHHHHSCSSCCSE-E
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecC-----CCHHHHHHHHHHHhhcCCE-E
Confidence 467777766655666777777887777765433333334444444555555432 245566655543 2233 3
Q ss_pred EeCCC-Ccccc--CCCHHHHHHHHHH
Q 014769 186 IINPG-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 186 i~~p~-nptG~--~~~~~~l~~i~~~ 208 (419)
+.+.. .+.+. ..+.+++++..+.
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~ 102 (230)
T 3guy_A 77 VHSAGSGYFGLLQEQDPEQIQTLIEN 102 (230)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHH
T ss_pred EEeCCcCCCCccccCCHHHHHHHHHH
Confidence 44432 22222 3576777766653
No 267
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=40.06 E-value=1.1e+02 Score=25.95 Aligned_cols=98 Identities=12% Similarity=-0.025 Sum_probs=56.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCc---HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYY---EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (419)
+...+++|.+++..=..+...|.+.|..|++.+-.-... ...++..|.++..+.+|-. |.+++++.++.
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt-----~~~~v~~~~~~~~~ 80 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVS-----KKKDVEEFVRRTFE 80 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCC-----CHHHHHHHHHHHHH
Confidence 344567776666666666777888898888765332222 2233455777777776532 44454443322
Q ss_pred --CccEEEEeCCC--Cccc--cCCCHHHHHHHHHH
Q 014769 180 --NTAAMVIINPG--NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 180 --~~~~v~i~~p~--nptG--~~~~~~~l~~i~~~ 208 (419)
...-++++|.. .+.+ .-++.++|+++.++
T Consensus 81 ~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~v 115 (254)
T 4fn4_A 81 TYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAV 115 (254)
T ss_dssp HHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHH
Confidence 22335666653 2333 24688888888765
No 268
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=39.86 E-value=74 Score=27.08 Aligned_cols=55 Identities=13% Similarity=0.048 Sum_probs=33.9
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
...++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|
T Consensus 30 ~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~D 84 (281)
T 3ppi_A 30 GASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTN 84 (281)
T ss_dssp TEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcC
Confidence 3457777766665566677777889888776543323334444456566666654
No 269
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=39.55 E-value=1.2e+02 Score=26.35 Aligned_cols=35 Identities=11% Similarity=0.169 Sum_probs=21.4
Q ss_pred cEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 109 DVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 109 ~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
-|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 73 pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 110 (292)
T 3daq_A 73 PVIAGTGTNDTEKSIQASIQAKALGADAIMLITPYYNK 110 (292)
T ss_dssp CEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred cEEEeCCcccHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 355543 45666665544433333999999998864
No 270
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=39.52 E-value=1.6e+02 Score=24.39 Aligned_cols=67 Identities=13% Similarity=-0.078 Sum_probs=37.8
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhh
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALA 177 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~ 177 (419)
....++||.++...=..+...|.+.|..|++..-.-.......+..+.++..+.+|-. |.+.+++++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~ 77 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVT-----SEKDVQTAL 77 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTT-----CHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCC-----CHHHHHHHH
Confidence 3345777766655556666777778888776644333334444444555666665432 445554443
No 271
>1yht_A DSPB; beta barrel, hydrolase; 2.00A {Aggregatibacter actinomycetemcomitans} SCOP: c.1.8.6
Probab=38.96 E-value=46 Score=30.13 Aligned_cols=71 Identities=15% Similarity=0.290 Sum_probs=44.2
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCc----cEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT----AAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~----~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
.+.+..+++++..+.+..+.+|.+..+.+.+... .+ ...+ .++ .+.+-.++.+++++|++.|+++++-||-
T Consensus 39 id~mA~~KlN~lH~HltDdq~~rle~~~~~~~~~-~~~~~~~g~~-~~~-~~~~g~YT~~di~eiv~YA~~rgI~VIP 113 (367)
T 1yht_A 39 IDTISLSGGNFLHLHFSDHENYAIESHLLNQRAE-NAVQGKDGIY-INP-YTGKPFLSYRQLDDIKAYAKAKGIELIP 113 (367)
T ss_dssp HHHHHHTTCCEEEEECBSSSCBCBCBTTTTBCGG-GSEECTTSCE-ECT-TTCCEEBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHcCCcEEEEEEEcCCCceeeecchhhhhh-hhccccCCCc-CCC-CCCCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 3456677888888888776677776543221110 00 0000 111 1223469999999999999999987763
No 272
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=38.62 E-value=1.2e+02 Score=25.27 Aligned_cols=96 Identities=17% Similarity=0.147 Sum_probs=49.1
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (419)
....++||.++...=..+...|.+.|.+|++..-.-..........+.....+.+|-. |.+.+++.++.
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVT-----NPESIEAVLKAITDEFG 82 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTT-----CHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCC-----CHHHHHHHHHHHHHHcC
Confidence 3456777777666556667778788988877643322222333333334445554322 44555444331
Q ss_pred CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 ~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+.. +++.+.. .+.+ ...+.+++++..+
T Consensus 83 ~iD-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (248)
T 3op4_A 83 GVD-ILVNNAGITRDNLLMRMKEEEWSDIME 112 (248)
T ss_dssp CCS-EEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 233 3444432 2222 2346677776654
No 273
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.39 E-value=2.2e+02 Score=25.29 Aligned_cols=54 Identities=15% Similarity=0.233 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+-...-|.|++..|.|..
T Consensus 83 ~eEr~~vi~~~ve~~~---grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~Y~~ 139 (343)
T 2v9d_A 83 AEERKAIARFAIDHVD---RRVPVLIGTGGTNARETIELSQHAQQAGADGIVVINPYYWK 139 (343)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEECCSSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 3445555555443211 1123665444 4666665544433234999999998863
No 274
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=37.37 E-value=80 Score=26.09 Aligned_cols=102 Identities=10% Similarity=0.107 Sum_probs=55.8
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
++++..+.+ ....|.++++..|.-.. -..+....|.....+++.. .+++...+..+...|+|-..++
T Consensus 43 T~Llr~~~r-~~~~g~kvli~kp~~D~R~~~~~I~Sr~G~~~~a~~v~~-------~~di~~~i~~~~dvV~IDEaQF-- 112 (219)
T 3e2i_A 43 EELIRRLRR-GIYAKQKVVVFKPAIDDRYHKEKVVSHNGNAIEAINISK-------ASEIMTHDLTNVDVIGIDEVQF-- 112 (219)
T ss_dssp HHHHHHHHH-HHHTTCCEEEEEEC-----------CBTTBCCEEEEESS-------GGGGGGSCCTTCSEEEECCGGG--
T ss_pred HHHHHHHHH-HHHcCCceEEEEeccCCcchhhhHHHhcCCceeeEEeCC-------HHHHHHHHhcCCCEEEEechhc--
Confidence 445555444 44567788888775532 2344555666655555432 2333333444566777776665
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
++.+.++.+.+++ ..|+.||+=.--.+ |.+.++..
T Consensus 113 ---f~~~~v~~l~~la-~~gi~Vi~~GLd~D--F~~~~F~~ 147 (219)
T 3e2i_A 113 ---FDDEIVSIVEKLS-ADGHRVIVAGLDMD--FRGEPFEP 147 (219)
T ss_dssp ---SCTHHHHHHHHHH-HTTCEEEEEEESBC--TTSCBCTT
T ss_pred ---CCHHHHHHHHHHH-HCCCEEEEeecccc--cccCCCcc
Confidence 5666777888887 57999887544444 33555444
No 275
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=36.78 E-value=1.8e+02 Score=24.13 Aligned_cols=97 Identities=18% Similarity=0.062 Sum_probs=52.2
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcC---
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (419)
....++||.++...=..+...|.+.|.+|++..-.-...... +...+.++..+.+|-. |.+.+++.+..
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 80 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDAR-----NEDEVTAFLNAADA 80 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCC-----CHHHHHHHHHHHHh
Confidence 344577777776666667777878888887765433322222 2334667777776532 44444443321
Q ss_pred -CccEEEEeCCC-Ccccc--CCCHHHHHHHHH
Q 014769 180 -NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (419)
Q Consensus 180 -~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 207 (419)
...-+++.+.. .+.+. ..+.+++++..+
T Consensus 81 ~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 112 (252)
T 3h7a_A 81 HAPLEVTIFNVGANVNFPILETTDRVFRKVWE 112 (252)
T ss_dssp HSCEEEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred hCCceEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 22234454442 22221 356677766654
No 276
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=36.35 E-value=88 Score=26.62 Aligned_cols=97 Identities=16% Similarity=0.109 Sum_probs=50.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC---------c------HHHHhhcCCEEEEEeccCCCCcccCh
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY---------Y------EGIAQRKQVEVRHFDLLPERNWEVDL 170 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~---------~------~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (419)
....++||.++...=..+...|.+.|..|++..-.... . ...+...+.++..+.+|-. |.
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~ 83 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVR-----DR 83 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTT-----CH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCC-----CH
Confidence 33457777766665566677788888888775432110 0 1122334666666665432 44
Q ss_pred HHHHHhhcC------CccEEEEeCC-CCccccCCCHHHHHHHHHH
Q 014769 171 DAVEALADK------NTAAMVIINP-GNPCGNVFTYHHLQEIAEM 208 (419)
Q Consensus 171 ~~l~~~~~~------~~~~v~i~~p-~nptG~~~~~~~l~~i~~~ 208 (419)
+.+.+.+.. +.. +++.+. ..+.+...+.+++++..+.
T Consensus 84 ~~v~~~~~~~~~~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~ 127 (287)
T 3pxx_A 84 AAVSRELANAVAEFGKLD-VVVANAGICPLGAHLPVQAFADAFDV 127 (287)
T ss_dssp HHHHHHHHHHHHHHSCCC-EEEECCCCCCCCTTCCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCC-EEEECCCcCcccCcCCHHHHHHHhhh
Confidence 444443321 233 344443 2233333666777766653
No 277
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.27 E-value=1.2e+02 Score=24.97 Aligned_cols=95 Identities=12% Similarity=0.022 Sum_probs=46.8
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------Ccc
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------NTA 182 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------~~~ 182 (419)
.++||.++...=..+...|.+.|..|++..-.-..........+..+..+.+|-. |.+.+++.++. +..
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~id 79 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLA-----HHEDVDVAFAAAVEWGGLPE 79 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTT-----SHHHHHHHHHHHHHHHCSCS
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCC-----CHHHHHHHHHHHHHhcCCCc
Confidence 4677766665556666777778888877644332222333333334555555432 34444443321 233
Q ss_pred EEEEeCCCCcccc--CCCHHHHHHHHHH
Q 014769 183 AMVIINPGNPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 183 ~v~i~~p~nptG~--~~~~~~l~~i~~~ 208 (419)
.++.+-...+.+. ..+.+++++..+.
T Consensus 80 ~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 107 (235)
T 3l6e_A 80 LVLHCAGTGEFGPVGVYTAEQIRRVMES 107 (235)
T ss_dssp EEEEECCCC------CCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCChHhCCHHHHHHHHHH
Confidence 4433322222222 3566777776653
No 278
>3lkv_A Uncharacterized conserved domain protein; ATPase binding cassette, PSI, MCSG, structural genomics, Pro structure initiative; HET: PHE; 2.20A {Vibrio cholerae}
Probab=35.34 E-value=2.1e+02 Score=24.50 Aligned_cols=144 Identities=15% Similarity=0.188 Sum_probs=69.7
Q ss_pred HHHHHHHHHHHhCCCC-------CCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcCCCCeE
Q 014769 62 VEAEDAIVDAVRSGKF-------NCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLARPGANV 134 (419)
Q Consensus 62 ~~v~~a~~~~~~~~~~-------~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~v 134 (419)
..+++.+.+.+....+ ..|.+.+|.......+++-+.. -++ +++++.++..+ ..+..... .-.|
T Consensus 23 d~~~~G~~~~L~~~G~~~g~nv~~~~~~a~gd~~~~~~~~~~l~~-----~~~-DlIiai~t~aa-~a~~~~~~--~iPV 93 (302)
T 3lkv_A 23 DATRQGLLDGLKAKGYEEGKNLEFDYKTAQGNPAIAVQIARQFVG-----ENP-DVLVGIATPTA-QALVSATK--TIPI 93 (302)
T ss_dssp HHHHHHHHHHHHHTTCCBTTTEEEEEEECTTCHHHHHHHHHHHHT-----TCC-SEEEEESHHHH-HHHHHHCS--SSCE
T ss_pred HHHHHHHHHHHHhhCcccCCcEEEEEEeCCCCHHHHHHHHHHHHh-----cCC-cEEEEcCCHHH-HHHHhhcC--CCCe
Confidence 4555556666543211 1344567888777777776643 122 57777665544 33333332 2234
Q ss_pred Ee---eCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHh
Q 014769 135 LL---PRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARK 211 (419)
Q Consensus 135 lv---~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~ 211 (419)
+. .+|.-..........|.++..+.- .....-.++.+.+.+....+..++.+++.+.. ....+.+.+.+.+
T Consensus 94 Vf~~v~dp~~~~l~~~~~~~g~nvtGv~~--~~~~~~~l~l~~~l~P~~k~vgvi~~~~~~~s----~~~~~~~~~~~~~ 167 (302)
T 3lkv_A 94 VFTAVTDPVGAKLVKQLEQPGKNVTGLSD--LSPVEQHVELIKEILPNVKSIGVVYNPGEANA----VSLMELLKLSAAK 167 (302)
T ss_dssp EEEEESCTTTTTSCSCSSSCCSSEEEEEC--CCCHHHHHHHHHHHSTTCCEEEEEECTTCHHH----HHHHHHHHHHHHH
T ss_pred EEEecCCcchhhhcccccCCCCcEEEEEC--CcCHHHHHHHHHHhCCCCCEEEEEeCCCcccH----HHHHHHHHHHHHH
Confidence 32 344333322222233444444321 11111123334444433344556666654332 2346677777888
Q ss_pred CCCeEEEcc
Q 014769 212 LRVMVVADE 220 (419)
Q Consensus 212 ~~~~li~De 220 (419)
+|+-++.-.
T Consensus 168 ~g~~~v~~~ 176 (302)
T 3lkv_A 168 HGIKLVEAT 176 (302)
T ss_dssp TTCEEEEEE
T ss_pred cCCEEEEEe
Confidence 888776543
No 279
>2epl_X N-acetyl-beta-D-glucosaminidase; glycoside hydrolase, family 20, GCNA, hydro; 1.40A {Streptococcus gordonii} PDB: 2epk_X 2epm_X 2epn_A* 2epo_A
Probab=34.75 E-value=1.5e+02 Score=28.92 Aligned_cols=103 Identities=17% Similarity=0.159 Sum_probs=55.3
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcC---CC--CeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLAR---PG--ANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD 178 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~---~g--d~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~ 178 (419)
.++++.|.|+.++..++.-.+++|.+ .+ ...+...|.|.- +...++ -..+--++++.+.+.++
T Consensus 42 ~i~~~~i~I~a~~~~G~~~glqTL~QL~~~~~~~~~I~D~P~f~~----------RG~mlD--~sR~~f~~~~~ik~~id 109 (627)
T 2epl_X 42 EGRQGYYQVSYKQPHQLYRALALLSAALRSGQDEVQIEEEAAYED----------LAYMAD--CSRNAVLNLSSAKKMIE 109 (627)
T ss_dssp EEETTEEEEEESSTTHHHHHHHHHHHHHHTTCSSEEEEECCSCSE----------EEEEEE--CSSSCCBCHHHHHHHHH
T ss_pred EEeCCEEEEEECCHHHHHHHHHHHHHHhhcCCCceEEEeCCCCCc----------cceEEe--cCCCCCCCHHHHHHHHH
Confidence 35566788876666555555555432 22 234555666641 111222 12221245566555443
Q ss_pred C------CccEEEEeC-------CC-CccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 179 K------NTAAMVIIN-------PG-NPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 179 ~------~~~~v~i~~-------p~-nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
. +.--+.++. |. .+.|-.++.+++++|++.|+++++-||-
T Consensus 110 ~ma~~KlN~lh~Hl~D~~ei~~~P~l~~~~~~YT~~di~eiv~yA~~rgI~VIP 163 (627)
T 2epl_X 110 VLALMGYSTFELYMEDTYEIENQPYFGYFRGRYTVAELQEIEDYAADFDMSFVP 163 (627)
T ss_dssp HHHHHTCCEEEEECSSCBCCTTCTTTTTTTTCBCHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCcEEEEEeecccccCCCcccCccCCCcCHHHHHHHHHHHHHcCCEEEE
Confidence 2 111112211 21 2235679999999999999999987763
No 280
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=34.66 E-value=1.9e+02 Score=23.73 Aligned_cols=95 Identities=16% Similarity=0.133 Sum_probs=48.9
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (419)
...++||.++...=..+...|.+.|.+|++..-.-.... ..+...+.++..+.+|-. |.+.+++.++.
T Consensus 5 ~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~~~~~ 79 (247)
T 3lyl_A 5 EKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNIS-----DIESIQNFFAEIKAE 79 (247)
T ss_dssp TCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHT
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCC-----CHHHHHHHHHHHHHH
Confidence 345777776666555666777778888876644322221 222334666666665432 44444443321
Q ss_pred --CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 --NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 --~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+... ++.+.. .+.+ ...+.+++++..+
T Consensus 80 ~~~id~-li~~Ag~~~~~~~~~~~~~~~~~~~~ 111 (247)
T 3lyl_A 80 NLAIDI-LVNNAGITRDNLMMRMSEDEWQSVIN 111 (247)
T ss_dssp TCCCSE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2233 444432 2222 1346666666554
No 281
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=34.52 E-value=70 Score=18.67 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=25.0
Q ss_pred HHHHHHHHcccc--hHHHHHHHHHHHHHHHHHHHHhhcCC
Q 014769 297 QGAIPQILEKTK--EDFFCKLIDTLRESAEICYDGVKEIP 334 (419)
Q Consensus 297 ~~a~~~~l~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~ 334 (419)
|..++.++.+.. .+.++++...+..+.+.+.+.|+.+|
T Consensus 4 Qn~mydlvsel~~r~e~LE~Ri~~LE~KLd~L~~~l~aLp 43 (43)
T 2pnv_A 4 MNIMYDMISDLNERSEDFEKRIVTLETKLETLIGSIHALP 43 (43)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 334444444422 46678888888888888888887764
No 282
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=34.51 E-value=27 Score=32.76 Aligned_cols=30 Identities=13% Similarity=0.234 Sum_probs=26.9
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
-+.++++++++.|+++|+-||+|-|+.+..
T Consensus 74 Gt~~df~~lv~~aH~~Gi~VilD~V~NH~~ 103 (496)
T 4gqr_A 74 GNEDEFRNMVTRCNNVGVRIYVDAVINHMC 103 (496)
T ss_dssp BCHHHHHHHHHHHHHTTCEEEEEECCSEEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccCcCC
Confidence 367899999999999999999999988754
No 283
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=34.49 E-value=1.3e+02 Score=25.09 Aligned_cols=98 Identities=15% Similarity=0.095 Sum_probs=51.1
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
+....++||.++...=..+...|.+.|.+|++..-.-.... ..+...+.++..+.+|-. |.+.+++.++.
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 84 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVT-----DEQHREAVIKAAL 84 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 34456777776666556667777778888877643322221 122334666666665432 44444443321
Q ss_pred ---CccEEEEeCCC--CccccCCCHHHHHHHHH
Q 014769 180 ---NTAAMVIINPG--NPCGNVFTYHHLQEIAE 207 (419)
Q Consensus 180 ---~~~~v~i~~p~--nptG~~~~~~~l~~i~~ 207 (419)
...-+++.+.. .+.....+.+++++..+
T Consensus 85 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~ 117 (256)
T 3gaf_A 85 DQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFK 117 (256)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHH
Confidence 12224444442 22222467777776654
No 284
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=34.14 E-value=2.2e+02 Score=24.70 Aligned_cols=54 Identities=13% Similarity=0.124 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+-...-|.|++..|.|..
T Consensus 64 ~eEr~~vi~~~~~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 120 (306)
T 1o5k_A 64 EDEREKLVSRTLEIVD---GKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYYNK 120 (306)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 3445555555443211 1123655443 4666665544433234999999998864
No 285
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=33.68 E-value=93 Score=27.36 Aligned_cols=54 Identities=15% Similarity=0.118 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVT---LGCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.-.|++. +++.+++..+-.+-...-|.|++..|.|..
T Consensus 74 ~~Er~~v~~~~v~~~~---grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~ 130 (315)
T 3si9_A 74 HEEHKRIIELCVEQVA---KRVPVVAGAGSNSTSEAVELAKHAEKAGADAVLVVTPYYNR 130 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 4555555555443211 11235553 345666666544443334999999998864
No 286
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=33.35 E-value=65 Score=27.92 Aligned_cols=48 Identities=10% Similarity=0.117 Sum_probs=32.6
Q ss_pred ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccc
Q 014769 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 222 (419)
-.+.++++++.+.+.+++... | ++.++.+++.+.|+++++.++-..+.
T Consensus 77 ~~~~~~ea~~~Gi~~iVi~t~----G--~~~~~~~~l~~~A~~~gv~liGPNc~ 124 (288)
T 2nu8_A 77 CKDSILEAIDAGIKLIITITE----G--IPTLDMLTVKVKLDEAGVRMIGPNTP 124 (288)
T ss_dssp HHHHHHHHHHTTCSEEEECCC----C--CCHHHHHHHHHHHHHHTCEEECSSCC
T ss_pred HHHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEecCCc
Confidence 355666677766666555333 3 35677889999999999987755543
No 287
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=32.87 E-value=2.4e+02 Score=24.39 Aligned_cols=55 Identities=11% Similarity=0.031 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+- ..-.|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 59 ~~Er~~v~~~~~~~~~g--~rvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 116 (301)
T 3m5v_A 59 HEEHRTCIEIAVETCKG--TKVKVLAGAGSNATHEAVGLAKFAKEHGADGILSVAPYYNK 116 (301)
T ss_dssp HHHHHHHHHHHHHHHTT--SSCEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhCC--CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 45555555555442110 012355533 45566665544443334999999998864
No 288
>2es9_A Putative cytoplasmic protein; structural genomics, PSI, protein structure initiative, NORT structural genomics consortium, NESG; 2.00A {Salmonella typhimurium} SCOP: a.247.1.1 PDB: 2jn8_A
Probab=32.17 E-value=4.6 Score=27.83 Aligned_cols=80 Identities=18% Similarity=0.202 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHH----h---cCCCCeEE
Q 014769 63 EAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSV----L---ARPGANVL 135 (419)
Q Consensus 63 ~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~----l---~~~gd~vl 135 (419)
++++...+.+..-+...-.|..-.....+-|-+||++ .|++.++++| ++.|..++.+.-+.- . ...|.+|+
T Consensus 11 avIdKALDFI~~M~tSas~P~sMdESTAKGifKyL~e-lGvPas~~dv-~aRg~qegWn~gFT~k~~gWAek~esGer~v 88 (115)
T 2es9_A 11 TAIEKALDFIGGMNTSASVPHSMDESTAKGILKYLHD-LGVPVSPEVV-VARGEQEGWNPEFTKKVAGWAEKVASGNRIL 88 (115)
T ss_dssp CHHHHHHHHHHTSCTTCSSCCHHHHHHHHHHHHHHHH-TTCCCCHHHH-HHHHHHTTCCHHHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHhcccccCCCCCCccchHHHHHHHHHHHH-cCCCCCHHHH-HHhcccccCChhHHHHHHHHHHHhccCCeee
Confidence 3444444444433333333433445677778888876 7777666654 455666665544332 1 23789999
Q ss_pred eeCCCCCCc
Q 014769 136 LPRPGWPYY 144 (419)
Q Consensus 136 v~~p~~~~~ 144 (419)
+-+|.|++.
T Consensus 89 IKnPEyFst 97 (115)
T 2es9_A 89 IKNPEYFST 97 (115)
T ss_dssp CSSGGGSCH
T ss_pred ecChHHHHH
Confidence 999999863
No 289
>2kfp_A Pspto_3016 protein; alpha, beta, double-WING, structural genomics, PSI-2, protein structure initiative; NMR {Pseudomonas syringae} PDB: 3h9x_A
Probab=31.83 E-value=61 Score=24.03 Aligned_cols=39 Identities=10% Similarity=0.264 Sum_probs=28.5
Q ss_pred HHHHHHhcCeEeecCCCCCCCCeEEEEee--cCHHHHHHHHHH
Q 014769 367 ALKLAKEESVIVTPGIYVGLKNWLRIAFC--AEPSALKDGLGR 407 (419)
Q Consensus 367 ~~~ll~~~gv~v~~g~~~~~~~~~Ris~~--~~~~~l~~~l~~ 407 (419)
+..|.++.| +.||..++...|+-+.+. .+.++|.++|+.
T Consensus 71 ~~~Lr~~~~--i~PayhmnK~hWisv~Ld~~v~d~~i~~lI~~ 111 (125)
T 2kfp_A 71 VGSLRKKPG--IYPAYHMNKEHWITVLLNGPLGAKEIHSLIED 111 (125)
T ss_dssp HHHHHHSTT--EEECSSSCSSSEEEEETTTTCCHHHHHHHHHH
T ss_pred HHHHHhCCC--CCccccCCCCCeEEEEcCCCCCHHHHHHHHHH
Confidence 344545566 569998888999999883 577888777764
No 290
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=31.28 E-value=2.2e+02 Score=23.50 Aligned_cols=96 Identities=13% Similarity=0.031 Sum_probs=47.3
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----Cc
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----NT 181 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~ 181 (419)
...++||.++...=..+...|.+.|..|++..-.-..........+.++..+.+|-. |.+.+++.+.. ..
T Consensus 6 ~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 6 GKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVS-----SEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTT-----CHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCC-----CHHHHHHHHHHHHHHcCC
Confidence 345677766655556666777778888877643322222222333445555554322 44554444321 12
Q ss_pred cEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 182 AAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 182 ~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
.-+++.+.. .+.+ ...+.+++++..+
T Consensus 81 id~lv~~Ag~~~~~~~~~~~~~~~~~~~~ 109 (253)
T 1hxh_A 81 LNVLVNNAGILLPGDMETGRLEDFSRLLK 109 (253)
T ss_dssp CCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 223444432 2222 1346666666554
No 291
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=31.28 E-value=1.5e+02 Score=24.83 Aligned_cols=94 Identities=14% Similarity=0.089 Sum_probs=52.1
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----CccE
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----NTAA 183 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~~ 183 (419)
.|+||.|++..=..+...|.+.|.+|++.+-.-...... ...+.+...+..|-. |.+.+++.++. ...-
T Consensus 4 ~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~-~~~~~~~~~~~~Dv~-----~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 4 GVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADF-AKERPNLFYFHGDVA-----DPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HTTCTTEEEEECCTT-----SHHHHHHHHHHHHHHHSCCC
T ss_pred EEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhcCCEEEEEecCC-----CHHHHHHHHHHHHHHcCCCC
Confidence 577777777766777788888998888765332222222 223445556655422 34444443321 2223
Q ss_pred EEEeCC-CCcccc--CCCHHHHHHHHHH
Q 014769 184 MVIINP-GNPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 184 v~i~~p-~nptG~--~~~~~~l~~i~~~ 208 (419)
++++|. .++.+. -++.++++++.++
T Consensus 78 iLVNNAG~~~~~~~~~~~~e~~~~~~~v 105 (247)
T 3ged_A 78 VLVNNACRGSKGILSSLLYEEFDYILSV 105 (247)
T ss_dssp EEEECCCCCCCCGGGTCCHHHHHHHHHH
T ss_pred EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 455555 222232 3677888887765
No 292
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=30.94 E-value=1.8e+02 Score=24.50 Aligned_cols=99 Identities=11% Similarity=0.049 Sum_probs=51.4
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
++...++||.++...=..+...|.+.|.+|++..-.-...... +...+.++..+.+|-. |.+.+++.++.
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 98 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVT-----SESEIIEAFARLD 98 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHH
Confidence 3445677777766666667777888898888765332222222 2234556666655422 44555444331
Q ss_pred ---CccEEEEeCCC-Cccc--cCCCHHHHHHHHHH
Q 014769 180 ---NTAAMVIINPG-NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 180 ---~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 208 (419)
...-+++.+.. .+.+ ...+.+++++..+.
T Consensus 99 ~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 133 (271)
T 4ibo_A 99 EQGIDVDILVNNAGIQFRKPMIELETADWQRVIDT 133 (271)
T ss_dssp HHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHH
Confidence 12223444432 2222 23577777766553
No 293
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=30.90 E-value=2e+02 Score=23.82 Aligned_cols=54 Identities=19% Similarity=0.004 Sum_probs=29.3
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
..++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 59 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLD 59 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEec
Confidence 456777666555556667777788887765422111222223334445555554
No 294
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=30.67 E-value=1.4e+02 Score=25.88 Aligned_cols=54 Identities=9% Similarity=0.044 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.-.|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 59 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 115 (297)
T 3flu_A 59 VEEHTAVIEAVVKHVA---KRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYYNK 115 (297)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 4555555555443211 112455543 45666666544443334999999998864
No 295
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=30.56 E-value=1.4e+02 Score=24.69 Aligned_cols=70 Identities=11% Similarity=0.080 Sum_probs=38.8
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
.+...|+||.++...=..+...|.+.|.+|++..-.-.............+..+..+- -+.+.+.+.+..
T Consensus 12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~~~~~~~~ 81 (249)
T 3f9i_A 12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNL-----ANKEECSNLISK 81 (249)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCT-----TSHHHHHHHHHT
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCC-----CCHHHHHHHHHh
Confidence 3445677777766655666677778888887765433223333333333444444432 245566665543
No 296
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=30.27 E-value=1.4e+02 Score=26.10 Aligned_cols=54 Identities=11% Similarity=0.070 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.-.|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 75 ~~Er~~v~~~~v~~~~---grvpViaGvg~~st~eai~la~~A~~~Gadavlv~~P~y~~ 131 (314)
T 3qze_A 75 VEEHIQVIRRVVDQVK---GRIPVIAGTGANSTREAVALTEAAKSGGADACLLVTPYYNK 131 (314)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 4445555555433211 112355543 45666665544443334999999998864
No 297
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=30.07 E-value=2.3e+02 Score=23.32 Aligned_cols=95 Identities=18% Similarity=0.152 Sum_probs=47.9
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCC-CCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC------
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (419)
...++||.++...=..+...|.+.|.+|++..-.- ......+...+.++..+.+|-. |.+.+++.++.
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~~~g 81 (249)
T 2ew8_A 7 DKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVS-----QPGDVEAFGKQVISTFG 81 (249)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecC-----CHHHHHHHHHHHHHHcC
Confidence 34577776666555666777777888877653222 1112223334556666665432 44455444321
Q ss_pred CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 ~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+... ++.+.. .+.+ ...+.+++++..+
T Consensus 82 ~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 111 (249)
T 2ew8_A 82 RCDI-LVNNAGIYPLIPFDELTFEQWKKTFE 111 (249)
T ss_dssp CCCE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred CCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2333 444432 2222 1346666666554
No 298
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=29.98 E-value=1.1e+02 Score=26.91 Aligned_cols=54 Identities=9% Similarity=0.077 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 76 ~~Er~~v~~~~v~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 132 (315)
T 3na8_A 76 DPEWDEVVDFTLKTVA---HRVPTIVSVSDLTTAKTVRRAQFAESLGAEAVMVLPISYWK 132 (315)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 4455555555443211 112355543 45666666544443334999999998864
No 299
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=29.94 E-value=39 Score=31.48 Aligned_cols=30 Identities=10% Similarity=0.192 Sum_probs=26.6
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
+.++++++++.|+++|+-||.|-|+-+...
T Consensus 63 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~~ 92 (448)
T 1g94_A 63 NRAQFIDMVNRCSAAGVDIYVDTLINHMAA 92 (448)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEECSEECS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeeccccC
Confidence 478999999999999999999999887543
No 300
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=29.36 E-value=2.6e+02 Score=23.57 Aligned_cols=97 Identities=13% Similarity=0.152 Sum_probs=50.1
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcC---
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (419)
...++||.++...=..+...|.+.|.+|++..-.-....... ...+.++..+.+|-. |.+.+++.+..
T Consensus 27 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 101 (277)
T 4fc7_A 27 DKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVR-----APPAVMAAVDQALK 101 (277)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 345677776666556667778888988877643322222221 223666666665432 44444443321
Q ss_pred --CccEEEEeCCC-Cccc--cCCCHHHHHHHHHH
Q 014769 180 --NTAAMVIINPG-NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 180 --~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 208 (419)
...-+++.+.. ...+ ...+.+++++..++
T Consensus 102 ~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 135 (277)
T 4fc7_A 102 EFGRIDILINCAAGNFLCPAGALSFNAFKTVMDI 135 (277)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHH
Confidence 12224444442 2111 13577777766653
No 301
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.35 E-value=1.2e+02 Score=26.17 Aligned_cols=34 Identities=15% Similarity=0.105 Sum_probs=21.0
Q ss_pred EEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 110 VYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 110 i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 108 (294)
T 2ehh_A 72 VIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYYNK 108 (294)
T ss_dssp EEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred EEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 55543 34666665554443333999999998863
No 302
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=29.26 E-value=37 Score=33.94 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
.++++++++.|+++|+-||.|-||.+..
T Consensus 254 ~~efk~lV~~~H~~Gi~VilDvV~NH~~ 281 (714)
T 2ya0_A 254 IAEFKNLINEIHKRGMGAILDVVYNHTA 281 (714)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTTBCS
T ss_pred HHHHHHHHHHHHHCCCEEEEEeccCccc
Confidence 6899999999999999999999997653
No 303
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=29.16 E-value=1.9e+02 Score=24.37 Aligned_cols=96 Identities=18% Similarity=0.139 Sum_probs=49.7
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----Ccc
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-----NTA 182 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~ 182 (419)
..++||.++...=..+...|.+.|.+|++..-.-..........+.++..+.+|-. |.+.+.+.++. ...
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~g~i 103 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVT-----DPDSVRALFTATVEKFGRV 103 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTT-----SHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCC-----CHHHHHHHHHHHHHHcCCC
Confidence 34666666555555666777788888877643332333444444555566655432 44454444321 122
Q ss_pred EEEEeCCC--Cccc--cCCCHHHHHHHHHH
Q 014769 183 AMVIINPG--NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 183 ~v~i~~p~--nptG--~~~~~~~l~~i~~~ 208 (419)
-+++.+.. .+.+ ...+.+++++..++
T Consensus 104 D~lVnnAg~~~~~~~~~~~~~~~~~~~~~v 133 (272)
T 4dyv_A 104 DVLFNNAGTGAPAIPMEDLTFAQWKQVVDT 133 (272)
T ss_dssp CEEEECCCCCCCSSCGGGCCHHHHHHHHHH
T ss_pred CEEEECCCCCCCCCChhhCCHHHHHHHHHh
Confidence 24444442 2212 23577777776653
No 304
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=29.11 E-value=2.5e+02 Score=24.04 Aligned_cols=50 Identities=14% Similarity=0.108 Sum_probs=36.5
Q ss_pred CcccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 165 NWEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 165 ~~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
++-+|...+.++..-+...|++... .++.++++++.+.|++.|+-++++-
T Consensus 127 dfi~d~~qi~ea~~~GAD~VlLi~a------~L~~~~l~~l~~~a~~lGl~~lvev 176 (272)
T 3tsm_A 127 DFLFDPYQVYEARSWGADCILIIMA------SVDDDLAKELEDTAFALGMDALIEV 176 (272)
T ss_dssp SCCCSTHHHHHHHHTTCSEEEEETT------TSCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CccCCHHHHHHHHHcCCCEEEEccc------ccCHHHHHHHHHHHHHcCCeEEEEe
Confidence 3456666777766656677766543 3577889999999999999888764
No 305
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=29.06 E-value=2.4e+02 Score=23.38 Aligned_cols=32 Identities=28% Similarity=0.318 Sum_probs=21.5
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
...++||.++...=..+...|.+.|.+|++..
T Consensus 12 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 12 GRKAIVTGGSKGIGAAIARALDKAGATVAIAD 43 (263)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34577776665555566677777888887654
No 306
>2yl5_A Beta-N-acetylhexosaminidase; hydrolase; 2.15A {Streptococcus pneumoniae} PDB: 2yla_A* 2yl9_A*
Probab=28.87 E-value=46 Score=31.03 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=24.2
Q ss_pred CccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 191 NPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 191 nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+|.|-.++.+++++|++.|++++|-||-
T Consensus 86 ~~~~~~YT~~di~eIv~YA~~rgI~VIP 113 (442)
T 2yl5_A 86 DPNGTALTQAEVTELIEYAKSKDIGLIP 113 (442)
T ss_dssp CTTCSCBCHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCCcCHHHHHHHHHHHHHcCCeeee
Confidence 4567789999999999999999987763
No 307
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=28.85 E-value=1.3e+02 Score=25.97 Aligned_cols=51 Identities=12% Similarity=0.015 Sum_probs=30.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+. .. . |++..| +.+++..+-.+-...-|.|++..|.|..
T Consensus 51 ~eEr~~v~~~~~~~----~~-g-ViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 104 (288)
T 2nuw_A 51 KDEKRQNLNALYDV----TH-K-LIFQVGSLNLNDVMELVKFSNEMDILGVSSHSPYYFP 104 (288)
T ss_dssp HHHHHHHHHHHTTT----CS-C-EEEECCCSCHHHHHHHHHHHHTSCCSEEEECCCCSSC
T ss_pred HHHHHHHHHHHHHH----hC-C-eEEeeCCCCHHHHHHHHHHHHhcCCCEEEEcCCcCCC
Confidence 45566666666431 11 2 766544 3566665544443333999999998864
No 308
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=28.71 E-value=2.6e+02 Score=23.41 Aligned_cols=97 Identities=20% Similarity=0.209 Sum_probs=48.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
....++||.++...=..+...|.+.|..|++..-.-....... ...+.++..+.+|-. |.+.+++++..
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~-----~~~~v~~~~~~~~ 94 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVS-----NYEEVKKLLEAVK 94 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 3345677766665556667777778888876543221111222 223556666655432 44555444331
Q ss_pred ----CccEEEEeCCC-Cccc--cCCCHHHHHHHHHH
Q 014769 180 ----NTAAMVIINPG-NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 180 ----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 208 (419)
+... ++.+.. ...+ ...+.++++++.++
T Consensus 95 ~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~~ 129 (267)
T 1vl8_A 95 EKFGKLDT-VVNAAGINRRHPAEEFPLDEFRQVIEV 129 (267)
T ss_dssp HHHSCCCE-EEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCcCCCCChhhCCHHHHHHHHHH
Confidence 2333 344432 2222 23466777666553
No 309
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=28.69 E-value=1.1e+02 Score=27.32 Aligned_cols=75 Identities=13% Similarity=0.160 Sum_probs=43.6
Q ss_pred CCCCCcHHHHhhc-CCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeE
Q 014769 139 PGWPYYEGIAQRK-QVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMV 216 (419)
Q Consensus 139 p~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~l 216 (419)
|.|....++.... +.++..+-+.+. .-.+.+.+++. ...+.+++.+-. ++.++.+++.++++++++.+
T Consensus 65 pvy~sv~ea~~~~p~~DlaVi~vp~~----~a~~ai~ea~~~~Gv~~vViiT~G------~~e~~~~~l~~~a~~~g~rl 134 (334)
T 3mwd_B 65 PVFKNMADAMRKHPEVDVLINFASLR----SAYDSTMETMNYAQIRTIAIIAEG------IPEALTRKLIKKADQKGVTI 134 (334)
T ss_dssp EEESSHHHHHHHCTTCCEEEECCCTT----THHHHHHHHTTSTTCCEEEECCSC------CCHHHHHHHHHHHHHHTCEE
T ss_pred eeeCCHHHHhhcCCCCcEEEEecCHH----HHHHHHHHHHHHCCCCEEEEECCC------CCHHHHHHHHHHHHHcCCEE
Confidence 5555555554433 345444433221 12356666666 566777665433 24467889999999999988
Q ss_pred EEccccc
Q 014769 217 VADEVYG 223 (419)
Q Consensus 217 i~De~~~ 223 (419)
|==.+.+
T Consensus 135 iGPNc~G 141 (334)
T 3mwd_B 135 IGPATVG 141 (334)
T ss_dssp ECSSCCC
T ss_pred EccCCcc
Confidence 8444443
No 310
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=28.64 E-value=50 Score=30.62 Aligned_cols=29 Identities=21% Similarity=0.187 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 68 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 96 (441)
T 1lwj_A 68 SEREFKEMIEAFHDSGIKVVLDLPIHHTG 96 (441)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECTTBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeCCCccc
Confidence 47889999999999999999999886544
No 311
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=28.36 E-value=1.4e+02 Score=25.81 Aligned_cols=54 Identities=11% Similarity=0.073 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.-.|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 53 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 109 (291)
T 3tak_A 53 MEEHTQVIKEIIRVAN---KRIPIIAGTGANSTREAIELTKAAKDLGADAALLVTPYYNK 109 (291)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 4445555555443211 112455533 45666665544433334999999998864
No 312
>1wjw_A Phosphoacetylglucosamine mutase; carbohydrate metabolism, structural genomics, riken structural genomics/proteomics initiative, RSGI, isomerase; NMR {Mus musculus} SCOP: d.129.2.1
Probab=28.22 E-value=1.4e+02 Score=21.44 Aligned_cols=39 Identities=8% Similarity=0.032 Sum_probs=30.6
Q ss_pred eEeecCCCCCCCCeEEEEe-ecCHHHHHHHHHHHHHHHHHHhc
Q 014769 376 VIVTPGIYVGLKNWLRIAF-CAEPSALKDGLGRMKAFCQRHTK 417 (419)
Q Consensus 376 v~v~~g~~~~~~~~~Ris~-~~~~~~l~~~l~~l~~~~~~~~~ 417 (419)
++++|.. ....+|+-+ +.+.+++++.++.+.+.+++..+
T Consensus 59 vlvRpSG---TEP~irvy~Ea~~~~~~~~~~~~~~~~i~~~~~ 98 (112)
T 1wjw_A 59 AFVRPSG---TEDIVRVYAEANSQESADRLAYEVSLLVFQLAG 98 (112)
T ss_dssp EEEECSS---SSSSEEEEEEESSHHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEeCC---CccEEEEEEEECCHHHHHHHHHHHHHHHHHHHh
Confidence 5566653 367899999 67889999999999998887643
No 313
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=28.06 E-value=38 Score=23.13 Aligned_cols=21 Identities=19% Similarity=0.222 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCeEEEcccc
Q 014769 202 LQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~ 222 (419)
-.+|.++++++|+.++.|..-
T Consensus 29 A~~I~~~A~e~~VPi~e~~~L 49 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIPL 49 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEeCHHH
Confidence 578999999999999999743
No 314
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=27.89 E-value=2.7e+02 Score=23.43 Aligned_cols=58 Identities=17% Similarity=0.021 Sum_probs=35.0
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccC
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLP 162 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~ 162 (419)
+....++||.|+...=..+...|.+.|.+|++..-.-...... +...+.++..+..|-
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv 91 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDL 91 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCT
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecC
Confidence 4445677777776666677777888898887764333222222 233466666666543
No 315
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=27.73 E-value=2.6e+02 Score=23.15 Aligned_cols=32 Identities=25% Similarity=0.120 Sum_probs=21.7
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCC
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p 139 (419)
..++||.++...=..+...|.+.|..|++..-
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r 36 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGF 36 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeC
Confidence 35677766655556667777778888877643
No 316
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=27.72 E-value=52 Score=30.15 Aligned_cols=29 Identities=21% Similarity=0.182 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 67 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~ 95 (405)
T 1ht6_A 67 NAAELKSLIGALHGKGVQAIADIVINHRC 95 (405)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCccc
Confidence 47899999999999999999999988754
No 317
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=27.71 E-value=2.6e+02 Score=23.27 Aligned_cols=32 Identities=16% Similarity=0.199 Sum_probs=21.0
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
...++||.++...=..+...|.+.|.+|++..
T Consensus 7 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 7 GKVALVSGGARGMGASHVRAMVAEGAKVVFGD 38 (260)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 34567776665555566677777888887653
No 318
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=27.71 E-value=2.7e+02 Score=23.80 Aligned_cols=97 Identities=20% Similarity=0.193 Sum_probs=50.0
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcC---
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (419)
....++||.++...=..+...|.+.|.+|++..-.-...... +...+.++..+.+|-. |.+.+++++..
T Consensus 30 ~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~ 104 (301)
T 3tjr_A 30 DGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVR-----HLDEMVRLADEAFR 104 (301)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCC-----CHHHHHHHHHHHHH
Confidence 334677776666655566777778888887764332222222 2233566666665432 44555444331
Q ss_pred --CccEEEEeCCC-Ccccc--CCCHHHHHHHHH
Q 014769 180 --NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (419)
Q Consensus 180 --~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 207 (419)
...-+++.+.. .+.+. ..+.+++++..+
T Consensus 105 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~ 137 (301)
T 3tjr_A 105 LLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVID 137 (301)
T ss_dssp HHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred hCCCCCEEEECCCcCCCCCcccCCHHHHHHHHH
Confidence 12224444442 22222 356677766654
No 319
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=27.54 E-value=2e+02 Score=25.02 Aligned_cols=52 Identities=15% Similarity=0.085 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVT---LGCKQAVEVILSVLARPGANVLLPRPGW 141 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~ 141 (419)
.+=|..+.+...+.-+ +.--|++. +++.+++..+-.+-...-|.+++..|.|
T Consensus 60 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 60 DDERDVLTRTILEHVA---GRVPVIVTTSHYSTQVCAARSLRAQQLGAAMVMAMPPYH 114 (309)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEECCSCB
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCchHHHHHHHHHHHHHcCCCEEEEcCCCC
Confidence 4455555555443211 11235553 3456666655444433348999888876
No 320
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=27.27 E-value=56 Score=31.22 Aligned_cols=31 Identities=26% Similarity=0.250 Sum_probs=27.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccccC
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTFG 228 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 228 (419)
+.++++++++.|+++|+-||.|-++.+...+
T Consensus 91 t~~dfk~Lv~~aH~~GI~VilD~V~NHt~~~ 121 (527)
T 1gcy_A 91 SDAQLRQAASALGGAGVKVLYDVVPNHMNRG 121 (527)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCCTT
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeecCcCCC
Confidence 4789999999999999999999999875543
No 321
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=27.05 E-value=2.8e+02 Score=23.21 Aligned_cols=99 Identities=11% Similarity=0.075 Sum_probs=51.8
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
.+....++||.++...=..+...|.+.|.+|++..-.-.. ....+...+.++..+.+|-. |.+.+.+.++.
T Consensus 26 ~l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~ 100 (271)
T 4iin_A 26 QFTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAA-----SESDFIEAIQT 100 (271)
T ss_dssp CCSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCC-----CHHHHHHHHHH
Confidence 4455677888777666566777777888887765432211 12233445666777666432 44444443321
Q ss_pred -----CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 -----NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 -----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
...-+++.+.. .+.+ ...+.+++++..+
T Consensus 101 ~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~ 136 (271)
T 4iin_A 101 IVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVID 136 (271)
T ss_dssp HHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHH
Confidence 12223444432 2222 2356666666654
No 322
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=27.01 E-value=2.3e+02 Score=24.61 Aligned_cols=97 Identities=14% Similarity=0.010 Sum_probs=49.7
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC----------CCCc---HHHHhhcCCEEEEEeccCCCCcccChHHH
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG----------WPYY---EGIAQRKQVEVRHFDLLPERNWEVDLDAV 173 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~----------~~~~---~~~~~~~g~~~~~~~~~~~~~~~~~~~~l 173 (419)
...++||.++...=..+...|.+.|..|++..-. -... ...+...+.++..+.+|-. |.+.+
T Consensus 27 gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v 101 (322)
T 3qlj_A 27 GRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVA-----DWDQA 101 (322)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTT-----SHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHH
Confidence 3456777666655566677777889888876432 1111 1223344666666665432 44554
Q ss_pred HHhhcC-----CccEEEEeCCC-Cccc--cCCCHHHHHHHHHH
Q 014769 174 EALADK-----NTAAMVIINPG-NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 174 ~~~~~~-----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 208 (419)
.+.+.. ...-+++.+.. ...+ ...+.+++++..++
T Consensus 102 ~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~v 144 (322)
T 3qlj_A 102 AGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAV 144 (322)
T ss_dssp HHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 443321 12223444432 2222 23566777766653
No 323
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=26.93 E-value=1.7e+02 Score=24.76 Aligned_cols=33 Identities=18% Similarity=0.188 Sum_probs=23.0
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
....++||.++...=..+...|.+.|..|++..
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~ 42 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVD 42 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEe
Confidence 345677777766655667777888898887653
No 324
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=26.89 E-value=2.7e+02 Score=23.48 Aligned_cols=160 Identities=14% Similarity=0.162 Sum_probs=89.9
Q ss_pred HHHhhhcCCCCCeeeccCC--CCCCCCCCCChHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHhhCCCCCCCCc
Q 014769 32 IIDSVNKNDPRPVVPLGYG--DPTAFPCFRTAVEAEDAIVDAVRSGKFNCYATNSGIPPARRAIADYLSRDLPYKLSADD 109 (419)
Q Consensus 32 ~~~~~~~~~~~~~i~l~~g--~~~~~~~~~~~~~v~~a~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ 109 (419)
+...+.+ .|-++|-+++- ||..+ =|.++++..+++.++.. ...+-+.+.+. +. . --
T Consensus 33 ~~~~l~~-~GaD~iElGiPfSDP~aD-----GpvIq~a~~rAL~~g~~--------~~~~~~~~~~~----r~-~---~P 90 (252)
T 3tha_A 33 FLQRLDQ-SPIDILELGVAYSDPIAD-----GEIIADAAKIALDQGVD--------IHSVFELLARI----KT-K---KA 90 (252)
T ss_dssp HHHTGGG-SSCSEEEEECCCSCCCSC-----CCHHHHHHHHHHHTTCC--------HHHHHHHHHHC----CC-S---SE
T ss_pred HHHHHHH-cCCCEEEECCCCCCCCCC-----cHHHHHHHHHHHHCCCC--------HHHHHHHHHHH----hc-C---CC
Confidence 3444433 48899988875 44433 36788888888876421 12232333222 11 1 12
Q ss_pred EEEcccH----HHHHHHHHHHhcCCC-CeEEeeCCCCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCc
Q 014769 110 VYVTLGC----KQAVEVILSVLARPG-ANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNT 181 (419)
Q Consensus 110 i~~t~g~----~~al~~~~~~l~~~g-d~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 181 (419)
+++.+=. ..++...+..+.+-| |.+++++.-+.. +...++..|+....+-. +. -+.+.++.......
T Consensus 91 ivlm~Y~N~i~~~G~e~F~~~~~~aGvdG~IipDLP~eE~~~~~~~~~~~Gl~~I~lva-P~----t~~eRi~~ia~~a~ 165 (252)
T 3tha_A 91 LVFMVYYNLIFSYGLEKFVKKAKSLGICALIVPELSFEESDDLIKECERYNIALITLVS-VT----TPKERVKKLVKHAK 165 (252)
T ss_dssp EEEECCHHHHHHHCHHHHHHHHHHTTEEEEECTTCCGGGCHHHHHHHHHTTCEECEEEE-TT----SCHHHHHHHHTTCC
T ss_pred EEEEeccCHHHHhhHHHHHHHHHHcCCCEEEeCCCCHHHHHHHHHHHHHcCCeEEEEeC-CC----CcHHHHHHHHHhCC
Confidence 4332221 234555666666666 899998865533 45667888988655432 21 23566666655555
Q ss_pred cEEEEeCCCCccccCCC-HHHHHHHHHHHHhC-CCeEEE
Q 014769 182 AAMVIINPGNPCGNVFT-YHHLQEIAEMARKL-RVMVVA 218 (419)
Q Consensus 182 ~~v~i~~p~nptG~~~~-~~~l~~i~~~~~~~-~~~li~ 218 (419)
..+++++-..-||...+ .+.+.++++.++++ ++.+++
T Consensus 166 gFiY~Vs~~GvTG~~~~~~~~~~~~v~~vr~~~~~Pv~v 204 (252)
T 3tha_A 166 GFIYLLASIGITGTKSVEEAILQDKVKEIRSFTNLPIFV 204 (252)
T ss_dssp SCEEEECCSCSSSCSHHHHHHHHHHHHHHHTTCCSCEEE
T ss_pred CeEEEEecCCCCCcccCCCHHHHHHHHHHHHhcCCcEEE
Confidence 66776665556887533 23466777777765 445554
No 325
>2cho_A Glucosaminidase, hexosaminiase; O-GLCNACASE, hydrolase, N-acetylglucosamine; 1.85A {Bacteroides thetaiotaomicron} SCOP: a.246.1.1 c.1.8.10 d.92.2.3 PDB: 2chn_A 2vvn_A* 2vvs_A* 2x0h_A* 2xm2_A* 2w4x_A* 2w66_A* 2w67_A* 2wca_A* 2xj7_A* 2xm1_A* 2j47_A* 2jiw_A* 2wzh_A* 2wzi_A* 2j4g_A*
Probab=26.70 E-value=2e+02 Score=28.69 Aligned_cols=25 Identities=8% Similarity=0.141 Sum_probs=17.6
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhc
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLA 128 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~ 128 (419)
.++++.|.|+.++..+++-.+++|.
T Consensus 84 ~i~~~~i~I~a~~~~G~fyg~qTL~ 108 (716)
T 2cho_A 84 SVNEKEIVLAGNDERGTYYALQTFA 108 (716)
T ss_dssp EECSSEEEEEESSHHHHHHHHHHHH
T ss_pred EEeCCEEEEEEcCHHHHHHHHHHHH
Confidence 4566788888877777776666654
No 326
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=26.45 E-value=57 Score=30.25 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 85 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 113 (435)
T 1mxg_A 85 SKEELVRLIQTAHAYGIKVIADVVINHRA 113 (435)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccccc
Confidence 57899999999999999999999987654
No 327
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=26.44 E-value=2.7e+02 Score=22.82 Aligned_cols=33 Identities=21% Similarity=0.076 Sum_probs=21.7
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
....++||.++...=..+...|.+.|.+|++..
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~ 42 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILID 42 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 344677776665555666677777888877664
No 328
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=26.33 E-value=1.1e+02 Score=26.56 Aligned_cols=49 Identities=22% Similarity=0.303 Sum_probs=33.7
Q ss_pred ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc
Q 014769 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 223 (419)
-.+.++++++.+.+.+++.+ +| ++.++.+++.+.|+++++.++-..+..
T Consensus 84 ~~~~v~ea~~~Gi~~vVi~t----~G--~~~~~~~~l~~~A~~~gi~viGPNc~G 132 (297)
T 2yv2_A 84 APDAVYEAVDAGIRLVVVIT----EG--IPVHDTMRFVNYARQKGATIIGPNCPG 132 (297)
T ss_dssp HHHHHHHHHHTTCSEEEECC----CC--CCHHHHHHHHHHHHHHTCEEECSSSCE
T ss_pred HHHHHHHHHHCCCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEEcCCCCe
Confidence 35666777776777565543 23 356678899999999999877665443
No 329
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=26.30 E-value=1.3e+02 Score=26.01 Aligned_cols=54 Identities=13% Similarity=0.117 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+-...-|.|++..|.|..
T Consensus 52 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 108 (289)
T 2yxg_A 52 HEEHKKVIEKVVDVVN---GRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYYNK 108 (289)
T ss_dssp HHHHHHHHHHHHHHHT---TSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 3445555555443211 1123555433 4566665544433234999999998863
No 330
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=26.28 E-value=1.8e+02 Score=24.44 Aligned_cols=99 Identities=17% Similarity=0.068 Sum_probs=51.1
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCC-C---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWP-Y---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK- 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~-~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~- 179 (419)
+....++||.++...=..+...|.+.|..|++..-.-. . ....+...+.++..+.+|-. |.+.+++++..
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~-----d~~~v~~~~~~~ 100 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVS-----QESEVEALFAAV 100 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHH
Confidence 34456777777666656667778888988876532211 1 11223334666666665432 44444443321
Q ss_pred ----CccEEEEeCCC-Cccc--cCCCHHHHHHHHHH
Q 014769 180 ----NTAAMVIINPG-NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 180 ----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~~ 208 (419)
...-+++.+.. .+.+ ...+.+++++..++
T Consensus 101 ~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~v 136 (269)
T 4dmm_A 101 IERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDL 136 (269)
T ss_dssp HHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 12224444442 2222 23567777776653
No 331
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=26.14 E-value=1.7e+02 Score=23.95 Aligned_cols=102 Identities=9% Similarity=0.147 Sum_probs=48.5
Q ss_pred HHHHHHHHHHhcCCCCeEEeeCCCCCC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEEeCCCCcc
Q 014769 117 KQAVEVILSVLARPGANVLLPRPGWPY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVIINPGNPC 193 (419)
Q Consensus 117 ~~al~~~~~~l~~~gd~vlv~~p~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~p~npt 193 (419)
++++..+.+. ...|.+|++..|.-.. ...+....|.....+++.. .+++.+.+..+..+|+|-..+.
T Consensus 43 T~lL~~a~r~-~~~g~kVli~k~~~d~R~ge~~i~s~~g~~~~a~~~~~-------~~~~~~~~~~~~dvViIDEaQF-- 112 (214)
T 2j9r_A 43 EELIRRVRRT-QFAKQHAIVFKPCIDNRYSEEDVVSHNGLKVKAVPVSA-------SKDIFKHITEEMDVIAIDEVQF-- 112 (214)
T ss_dssp HHHHHHHHHH-HHTTCCEEEEECC-----------------CCEEECSS-------GGGGGGGCCSSCCEEEECCGGG--
T ss_pred HHHHHHHHHH-HHCCCEEEEEEeccCCcchHHHHHhhcCCeeEEeecCC-------HHHHHHHHhcCCCEEEEECccc--
Confidence 4555555555 4567888888766432 2234444455544444321 1233333333456777776666
Q ss_pred ccCCCHHHHHHHHHHHHhCCCeEEEcccccccccCCCCCCC
Q 014769 194 GNVFTYHHLQEIAEMARKLRVMVVADEVYGHLTFGSIPYTP 234 (419)
Q Consensus 194 G~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~ 234 (419)
++.+.++.+..++.+ ++.||+=.--.+ |.+.++..
T Consensus 113 ---~~~~~V~~l~~l~~~-~~~Vi~~Gl~~D--F~~~~F~~ 147 (214)
T 2j9r_A 113 ---FDGDIVEVVQVLANR-GYRVIVAGLDQD--FRGLPFGQ 147 (214)
T ss_dssp ---SCTTHHHHHHHHHHT-TCEEEEEECSBC--TTSCBCTT
T ss_pred ---CCHHHHHHHHHHhhC-CCEEEEEecccc--cccCcccc
Confidence 566667666555554 888886433333 33444443
No 332
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=26.09 E-value=3.1e+02 Score=23.41 Aligned_cols=97 Identities=16% Similarity=0.188 Sum_probs=50.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC-------CC--C------cHHHHhhcCCEEEEEeccCCCCcccCh
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG-------WP--Y------YEGIAQRKQVEVRHFDLLPERNWEVDL 170 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~-------~~--~------~~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (419)
....++||.++...=..+...|.+.|..|++..-. .. . ....+...+.++..+.+|-. |.
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~ 101 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVR-----DF 101 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCC-----CH
Confidence 34567777766665566677788889888765322 00 0 11122344666777666432 44
Q ss_pred HHHHHhhcC-----CccEEEEeCCC-Cccc---cCCCHHHHHHHHH
Q 014769 171 DAVEALADK-----NTAAMVIINPG-NPCG---NVFTYHHLQEIAE 207 (419)
Q Consensus 171 ~~l~~~~~~-----~~~~v~i~~p~-nptG---~~~~~~~l~~i~~ 207 (419)
+.++++++. ...-+++.+.. .+.+ ...+.+++++..+
T Consensus 102 ~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~ 147 (299)
T 3t7c_A 102 DAMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMID 147 (299)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHH
Confidence 554444331 12224444442 2222 2357777777665
No 333
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=26.07 E-value=1.8e+02 Score=24.06 Aligned_cols=33 Identities=24% Similarity=0.129 Sum_probs=21.7
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCC
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRP 139 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p 139 (419)
...++||.++...=..+...|.+.|.+|++..-
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r 39 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLATDGYRVVLIAR 39 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHHTCEEEEEES
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEC
Confidence 345667766655556666777778888877643
No 334
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=25.98 E-value=1.7e+02 Score=24.64 Aligned_cols=33 Identities=15% Similarity=0.186 Sum_probs=22.6
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
....++||.++...=..+...|.+.|..|++..
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 344677777666655666777878898887654
No 335
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=25.81 E-value=61 Score=30.47 Aligned_cols=30 Identities=17% Similarity=0.337 Sum_probs=26.3
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
+.++++++++.|+++|+-||.|-|+.+...
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~~ 125 (484)
T 2aaa_A 96 TADNLKSLSDALHARGMYLMVDVVPDHMGY 125 (484)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCCB
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCCcCC
Confidence 368899999999999999999999887553
No 336
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=25.69 E-value=3e+02 Score=23.09 Aligned_cols=96 Identities=18% Similarity=0.133 Sum_probs=48.5
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (419)
..++||.++...=..+...|.+.|.+|++..-.-..... .+...+.++..+.+|-. |.+.+++.+..
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 79 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVT-----DRHSVAAFAQAAVDTW 79 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHHHc
Confidence 346666666555556667777888888776432222222 22333666666665432 44444443321
Q ss_pred CccEEEEeCCC-Ccccc--CCCHHHHHHHHHH
Q 014769 180 NTAAMVIINPG-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 ~~~~v~i~~p~-nptG~--~~~~~~l~~i~~~ 208 (419)
...-+++.+.. .+.+. ..+.+++++..++
T Consensus 80 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~v 111 (264)
T 3tfo_A 80 GRIDVLVNNAGVMPLSPLAAVKVDEWERMIDV 111 (264)
T ss_dssp SCCCEEEECCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 12224444442 22222 3466777666553
No 337
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=25.67 E-value=58 Score=30.52 Aligned_cols=29 Identities=28% Similarity=0.379 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 95 t~~df~~lv~~~h~~Gi~VilD~V~NH~~ 123 (475)
T 2z1k_A 95 GNEALRHLLEVAHAHGVRVILDGVFNHTG 123 (475)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 36889999999999999999999887644
No 338
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=25.66 E-value=2.9e+02 Score=22.94 Aligned_cols=95 Identities=18% Similarity=0.084 Sum_probs=48.9
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC----
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (419)
...++||.|+...=..+...|.+.|..|++..-.-..... .+...+.++..+.+|-. |.+.+.+.+..
T Consensus 29 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~ 103 (262)
T 3rkr_A 29 GQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLS-----HSDAIAAFATGVLAA 103 (262)
T ss_dssp TCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCC-----CHHHHHHHHHHHHHh
Confidence 3456777666655556667777788888776433222221 22334666776665432 44454443322
Q ss_pred --CccEEEEeCCC--Ccccc--CCCHHHHHHHHH
Q 014769 180 --NTAAMVIINPG--NPCGN--VFTYHHLQEIAE 207 (419)
Q Consensus 180 --~~~~v~i~~p~--nptG~--~~~~~~l~~i~~ 207 (419)
+...++ .+.. .+.+. ..+.+++++..+
T Consensus 104 ~g~id~lv-~~Ag~~~~~~~~~~~~~~~~~~~~~ 136 (262)
T 3rkr_A 104 HGRCDVLV-NNAGVGWFGGPLHTMKPAEWDALIA 136 (262)
T ss_dssp HSCCSEEE-ECCCCCCCSSCGGGSCHHHHHHHHH
T ss_pred cCCCCEEE-ECCCccCCCCCcccCCHHHHHHHHH
Confidence 233443 3332 22222 356666766554
No 339
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.63 E-value=61 Score=30.50 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 80 t~~d~~~Lv~~aH~~Gi~VilD~V~NH~s 108 (488)
T 1wza_A 80 TLEDFHKLVEAAHQRGIKVIIDLPINHTS 108 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEecccccc
Confidence 47889999999999999999999886543
No 340
>2yl6_A Beta-N-acetylhexosaminidase; peptidoglycan-anchor, hydrolase; HET: ETE; 1.60A {Streptococcus pneumoniae} PDB: 2yll_A* 2yl8_A* 3rpm_A*
Probab=25.62 E-value=44 Score=31.03 Aligned_cols=27 Identities=19% Similarity=0.402 Sum_probs=23.6
Q ss_pred ccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 192 PCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 192 ptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
|.|-.++.+++++|++.|++++|-||-
T Consensus 84 ~~~~~YT~~di~eIv~YA~~rgI~VIP 110 (434)
T 2yl6_A 84 PNGNHLTESQMTDLINYAKDKGIGLIP 110 (434)
T ss_dssp TTCSCEEHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCccCHHHHHHHHHHHHHcCCEEEE
Confidence 456789999999999999999987763
No 341
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=25.59 E-value=3.1e+02 Score=23.36 Aligned_cols=98 Identities=27% Similarity=0.236 Sum_probs=50.7
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhh---cC-CEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQR---KQ-VEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~---~g-~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
....++||.|+...=..+...|.+.|..|++..-.-......... .+ .++..+.+|-. |.+.+++++..
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 114 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVS-----DPGSCADAARTVV 114 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCC-----CHHHHHHHHHHHH
Confidence 445677777766655667777888888887765443333332222 22 35555655432 44444443321
Q ss_pred ---CccEEEEeCCC-Ccccc--CCCHHHHHHHHHH
Q 014769 180 ---NTAAMVIINPG-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 ---~~~~v~i~~p~-nptG~--~~~~~~l~~i~~~ 208 (419)
...-+++.+.. .+.+. ..+.+++++..++
T Consensus 115 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~v 149 (293)
T 3rih_A 115 DAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDV 149 (293)
T ss_dssp HHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 12223444442 22222 3577777776653
No 342
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=25.58 E-value=2.8e+02 Score=22.76 Aligned_cols=57 Identities=16% Similarity=0.006 Sum_probs=33.1
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEecc
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLL 161 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~ 161 (419)
.....++||.++...=..+...|.+.|.+|++..-.-...... +...+.++..+.+|
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D 66 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVD 66 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEcc
Confidence 3445677777666655666777778888887764332222222 22335667676654
No 343
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=25.43 E-value=1.6e+02 Score=25.44 Aligned_cols=54 Identities=9% Similarity=0.107 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 52 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 108 (292)
T 2vc6_A 52 KSEHEQVVEITIKTAN---GRVPVIAGAGSNSTAEAIAFVRHAQNAGADGVLIVSPYYNK 108 (292)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCBEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHHHHcCCCEEEEcCCCCCC
Confidence 3445555555443211 112355543 34666665554443334999999998863
No 344
>1ua7_A Alpha-amylase; beta-alpha-barrels, acarbose, greek-KEY motif, hydrolase; HET: ACI GLD GLC G6D BGC; 2.21A {Bacillus subtilis} SCOP: b.71.1.1 c.1.8.1 PDB: 1bag_A* 3dc0_A
Probab=25.11 E-value=56 Score=30.07 Aligned_cols=30 Identities=30% Similarity=0.491 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
+.++++++++.|+++|+-||.|-++.+...
T Consensus 73 ~~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (422)
T 1ua7_A 73 TEQEFKEMCAAAEEYGIKVIVDAVINHTTF 102 (422)
T ss_dssp EHHHHHHHHHHHHTTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEeccCcccC
Confidence 578899999999999999999999887543
No 345
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=25.03 E-value=2.7e+02 Score=22.48 Aligned_cols=94 Identities=24% Similarity=0.220 Sum_probs=49.6
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHH----hhcCCEEEEEeccCCCCcccChHHHHHhhcC-----
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIA----QRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (419)
.++||.|+...=..+...|.+.|..|++..-.-....... ...+.++..+.+|- -|.+.+.++++.
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~-----~~~~~v~~~~~~~~~~~ 78 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDV-----SKAESVEEFSKKVLERF 78 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCT-----TCHHHHHHHCC-HHHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEecc-----CCHHHHHHHHHHHHHhc
Confidence 4677766665555666777778888777643322222211 23466677666543 255666655542
Q ss_pred -CccEEEEeCC-CCcccc--CCCHHHHHHHHHH
Q 014769 180 -NTAAMVIINP-GNPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 -~~~~v~i~~p-~nptG~--~~~~~~l~~i~~~ 208 (419)
+... ++.+. ..+.+. ..+.+++++..+.
T Consensus 79 g~id~-li~~Ag~~~~~~~~~~~~~~~~~~~~~ 110 (235)
T 3l77_A 79 GDVDV-VVANAGLGYFKRLEELSEEEFHEMIEV 110 (235)
T ss_dssp SSCSE-EEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred CCCCE-EEECCccccccCcccCCHHHHHHHHHH
Confidence 2333 44443 222222 3466777766653
No 346
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=24.98 E-value=1.8e+02 Score=25.38 Aligned_cols=54 Identities=11% Similarity=0.084 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCC-CeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPG-ANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~g-d~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.-.|++.. +..+++..+-.+-.-.+ |.|++..|.|..
T Consensus 59 ~~Er~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Ga~davlv~~P~y~~ 116 (311)
T 3h5d_A 59 HDEELELFAAVQKVVN---GRVPLIAGVGTNDTRDSIEFVKEVAEFGGFAAGLAIVPYYNK 116 (311)
T ss_dssp HHHHHHHHHHHHHHSC---SSSCEEEECCCSSHHHHHHHHHHHHHSCCCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCCcCHHHHHHHHHHHHhcCCCcEEEEcCCCCCC
Confidence 4555556665544221 122455543 35555555544443345 999999998864
No 347
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=24.78 E-value=52 Score=30.95 Aligned_cols=29 Identities=21% Similarity=0.172 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 79 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 107 (480)
T 1ud2_A 79 TKAQLERAIGSLKSNDINVYGDVVMNHKM 107 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 47899999999999999999999988753
No 348
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=24.70 E-value=1.2e+02 Score=24.71 Aligned_cols=34 Identities=18% Similarity=0.257 Sum_probs=24.7
Q ss_pred cEEEEeCCC-CccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 182 AAMVIINPG-NPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 182 ~~v~i~~p~-nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
++.++|.-- |+.|.... +.++.+++++||+.++.
T Consensus 160 Pa~vicEi~~~~dG~mar---~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 160 PAGVICELVRDEDGLMMR---LDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp SBEEEEEBBCTTTCCBCB---HHHHHHHHHHHTCCEEE
T ss_pred ceEEEEEEeECCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 344445444 88999998 67777788899987764
No 349
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=24.65 E-value=58 Score=30.56 Aligned_cols=29 Identities=17% Similarity=0.282 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 96 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 124 (478)
T 2guy_A 96 TADDLKALSSALHERGMYLMVDVVANHMG 124 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcccCC
Confidence 37899999999999999999999987654
No 350
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=24.57 E-value=3.4e+02 Score=23.47 Aligned_cols=54 Identities=7% Similarity=0.094 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVT---LGCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.-.|++. +++.+++..+-.+-...-|.|++..|.|..
T Consensus 67 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 123 (304)
T 3l21_A 67 DGEKIELLRAVLEAVG---DRARVIAGAGTYDTAHSIRLAKACAAEGAHGLLVVTPYYSK 123 (304)
T ss_dssp HHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCC
Confidence 4455555555443211 11235553 345566665544443334999999998864
No 351
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=24.56 E-value=2.1e+02 Score=24.12 Aligned_cols=32 Identities=13% Similarity=0.162 Sum_probs=22.2
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEee
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLP 137 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~ 137 (419)
....++||.++...=..+...|.+.|.+|++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEE
Confidence 33456777666665566677788889888775
No 352
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=24.54 E-value=1.2e+02 Score=25.54 Aligned_cols=49 Identities=10% Similarity=-0.045 Sum_probs=28.6
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCE
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVE 154 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~ 154 (419)
....++||.++...=..+...|.+.|..|++..-.-......+...+..
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~ 74 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAV 74 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCe
Confidence 3456788777666666667777778877776643333223333444543
No 353
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=24.44 E-value=2.9e+02 Score=23.27 Aligned_cols=95 Identities=14% Similarity=0.042 Sum_probs=48.4
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC-----
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK----- 179 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~----- 179 (419)
..++||.|+...=..+...|.+.|.+|++..-.-..... .+...+.++..+.+|-. |.+.+++++..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~~~~ 99 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVT-----STDEVHAAVAAAVERF 99 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTT-----CHHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHHc
Confidence 356677666655556667777888888766433221111 12233556666665432 44544443321
Q ss_pred CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 ~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
...-+++.+.. .+.+ ...+.+++++..+
T Consensus 100 g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~ 130 (279)
T 3sju_A 100 GPIGILVNSAGRNGGGETADLDDALWADVLD 130 (279)
T ss_dssp CSCCEEEECCCCCCCSCGGGCCHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 12224444442 2222 2356677776654
No 354
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=24.36 E-value=1.1e+02 Score=25.97 Aligned_cols=49 Identities=22% Similarity=0.325 Sum_probs=33.7
Q ss_pred cccChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 166 WEVDLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 166 ~~~~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
+.+|.-.+.++..-+..++++... .++.++++++.+.|++.|+-+++|-
T Consensus 109 fi~~~~qi~ea~~~GAD~ilLi~a------~l~~~~l~~l~~~a~~lGl~~lvEv 157 (251)
T 1i4n_A 109 FYIDTVQVKLASSVGADAILIIAR------ILTAEQIKEIYEAAEELGMDSLVEV 157 (251)
T ss_dssp CCCSTHHHHHHHHTTCSEEEEEGG------GSCHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CCCCHHHHHHHHHcCCCEEEEecc------cCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 445545555554446666665432 4677889999999999999888873
No 355
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=24.34 E-value=3.1e+02 Score=23.04 Aligned_cols=31 Identities=19% Similarity=0.090 Sum_probs=20.7
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
..++||.++...=..+...|.+.|..|++..
T Consensus 23 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 53 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLGKEGLRVFVCA 53 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4577776665555566677777887777653
No 356
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=24.34 E-value=53 Score=31.26 Aligned_cols=29 Identities=24% Similarity=0.234 Sum_probs=26.2
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 80 t~~dfk~Lv~~aH~~Gi~VilD~V~NH~~ 108 (515)
T 1hvx_A 80 TKAQYLQAIQAAHAAGMQVYADVVFDHKG 108 (515)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecCCcc
Confidence 47899999999999999999999987754
No 357
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=24.15 E-value=3.7e+02 Score=23.68 Aligned_cols=97 Identities=12% Similarity=0.041 Sum_probs=50.2
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----------cHHHHhhcCCEEEEEeccCCCCcccChHHHHH
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA 175 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~ 175 (419)
....++||.++...=..+...|.+.|..|++..-.-.. ....+...|.++..+.+|-. |.+.+++
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~-----d~~~v~~ 118 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVR-----DEQQISA 118 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTT-----CHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCC-----CHHHHHH
Confidence 33456777666555566677777888887765432221 12233445677777766432 4455544
Q ss_pred hhcC-----CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 176 LADK-----NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 176 ~~~~-----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+++. ...-+++.+.. ...+ ...+.++++++.+
T Consensus 119 ~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~ 158 (346)
T 3kvo_A 119 AVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMN 158 (346)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 4331 12234444442 2111 2356666666544
No 358
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=24.13 E-value=54 Score=30.84 Aligned_cols=29 Identities=28% Similarity=0.233 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 77 t~~df~~lv~~aH~~Gi~VilD~V~NH~~ 105 (483)
T 3bh4_A 77 TKSELQDAIGSLHSRNVQVYGDVVLNHKA 105 (483)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCccc
Confidence 47899999999999999999999987754
No 359
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=24.10 E-value=3.2e+02 Score=22.97 Aligned_cols=97 Identities=14% Similarity=0.079 Sum_probs=50.7
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
+....++||.++...=..+...|.+.|.+|++..-.-..... .+...+.++..+.+|-. |.+.+++.++.
T Consensus 30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~-----d~~~v~~~~~~~~ 104 (276)
T 3r1i_A 30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVT-----QPDQVRGMLDQMT 104 (276)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 344567777776665566677777888888776543322222 22334555666665432 44555444331
Q ss_pred ----CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 ----NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 ----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+... ++.+.. .+.+ ...+.++++++.+
T Consensus 105 ~~~g~iD~-lvnnAg~~~~~~~~~~~~~~~~~~~~ 138 (276)
T 3r1i_A 105 GELGGIDI-AVCNAGIVSVQAMLDMPLEEFQRIQD 138 (276)
T ss_dssp HHHSCCSE-EEECCCCCCCCCGGGCCHHHHHHHHH
T ss_pred HHcCCCCE-EEECCCCCCCCCcccCCHHHHHHHHH
Confidence 2333 444432 2222 2357777776655
No 360
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=24.08 E-value=3.1e+02 Score=22.72 Aligned_cols=33 Identities=21% Similarity=0.167 Sum_probs=22.0
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
+...++||.++...=..+...|.+.|.+|++..
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVA 38 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEc
Confidence 344577776665555666677777888887654
No 361
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=24.03 E-value=55 Score=30.71 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=26.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
+.++++++++.|+++|+-||.|-|+-+...
T Consensus 73 t~~d~~~lv~~~h~~Gi~VilD~V~NH~~~ 102 (471)
T 1jae_A 73 DESAFTDMTRRCNDAGVRIYVDAVINHMTG 102 (471)
T ss_dssp EHHHHHHHHHHHHHTTCEEEEEECCSBCCS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEecccccC
Confidence 478999999999999999999999877543
No 362
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=23.97 E-value=3e+02 Score=22.58 Aligned_cols=95 Identities=16% Similarity=0.121 Sum_probs=47.2
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcC----
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK---- 179 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~---- 179 (419)
...++||.++...=..+...|.+.|..|++..-.-...... +...+.++..+.+|-. |.+.++++++.
T Consensus 7 ~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~-----~~~~~~~~~~~~~~~ 81 (247)
T 2jah_A 7 GKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVA-----DRQGVDAAVASTVEA 81 (247)
T ss_dssp TCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHHHH
Confidence 34577777666655666777777888877654221111111 1223555666665432 44555444321
Q ss_pred --CccEEEEeCCC-Ccccc--CCCHHHHHHHHH
Q 014769 180 --NTAAMVIINPG-NPCGN--VFTYHHLQEIAE 207 (419)
Q Consensus 180 --~~~~v~i~~p~-nptG~--~~~~~~l~~i~~ 207 (419)
+... ++.+.. .+.+. ..+.++++++.+
T Consensus 82 ~g~id~-lv~nAg~~~~~~~~~~~~~~~~~~~~ 113 (247)
T 2jah_A 82 LGGLDI-LVNNAGIMLLGPVEDADTTDWTRMID 113 (247)
T ss_dssp HSCCSE-EEECCCCCCCCCSTTCCHHHHHHHHH
T ss_pred cCCCCE-EEECCCCCCCCchhhCCHHHHHHHHH
Confidence 2333 344332 22222 246666666554
No 363
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=23.92 E-value=2e+02 Score=23.90 Aligned_cols=94 Identities=20% Similarity=0.144 Sum_probs=49.2
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc---C-Ccc
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD---K-NTA 182 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~---~-~~~ 182 (419)
...++||.++...=..+...|.+.|..|++..- .........+..+..+.+|-. |.+.++++++ + ...
T Consensus 9 ~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r---~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~g~i 80 (257)
T 3tl3_A 9 DAVAVVTGGASGLGLATTKRLLDAGAQVVVLDI---RGEDVVADLGDRARFAAADVT-----DEAAVASALDLAETMGTL 80 (257)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHHTCEEEEEES---SCHHHHHHTCTTEEEEECCTT-----CHHHHHHHHHHHHHHSCE
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC---chHHHHHhcCCceEEEECCCC-----CHHHHHHHHHHHHHhCCC
Confidence 345677766655555666777778887776543 223444555666666665432 4444444332 1 123
Q ss_pred EEEEeCCC-Ccccc------CCCHHHHHHHHHH
Q 014769 183 AMVIINPG-NPCGN------VFTYHHLQEIAEM 208 (419)
Q Consensus 183 ~v~i~~p~-nptG~------~~~~~~l~~i~~~ 208 (419)
-+++.+.. ...+. ..+.+++++..++
T Consensus 81 d~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~v 113 (257)
T 3tl3_A 81 RIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDI 113 (257)
T ss_dssp EEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHH
T ss_pred CEEEECCCCCCCcccccccccCCHHHHHHHHHH
Confidence 34444442 11111 2566777776653
No 364
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=23.84 E-value=81 Score=27.42 Aligned_cols=48 Identities=23% Similarity=0.283 Sum_probs=32.7
Q ss_pred hHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEccccc
Q 014769 170 LDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYG 223 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 223 (419)
.+.++++++.+.+.+++.+ +| ++.++.+++.+.|+++++.++-..+.+
T Consensus 84 ~~~v~ea~~~Gi~~vVi~t----~G--~~~~~~~~l~~~A~~~gi~viGPNc~G 131 (294)
T 2yv1_A 84 KDAVFEAIDAGIELIVVIT----EH--IPVHDTMEFVNYAEDVGVKIIGPNTPG 131 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC----SC--CCHHHHHHHHHHHHHHTCEEECSSCCE
T ss_pred HHHHHHHHHCCCCEEEEEC----CC--CCHHHHHHHHHHHHHcCCEEEcCCCce
Confidence 4556666666777555433 23 256778899999999999877665443
No 365
>1jr2_A Uroporphyrinogen-III synthase; heme biosynthesis, HEAM biosynthesis, lyase; 1.84A {Homo sapiens} SCOP: c.113.1.1
Probab=23.80 E-value=1e+02 Score=26.45 Aligned_cols=77 Identities=9% Similarity=0.140 Sum_probs=43.8
Q ss_pred cccHHHHHHHHHHHhcCCCCeEEeeCCCC--CCcHHHHhhcCCEEEEEeccCCCCcccC-hHHHHHhhc--CCccEEEEe
Q 014769 113 TLGCKQAVEVILSVLARPGANVLLPRPGW--PYYEGIAQRKQVEVRHFDLLPERNWEVD-LDAVEALAD--KNTAAMVII 187 (419)
Q Consensus 113 t~g~~~al~~~~~~l~~~gd~vlv~~p~~--~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~l~~~~~--~~~~~v~i~ 187 (419)
..+.++++...+.....+|.+|+++.+.- ......+...|+.+..+++..... ..+ .+.+.+.+. .....|+++
T Consensus 139 ~~~~ae~L~~~l~~~~~~g~~vLi~rg~~~r~~L~~~L~~~G~~v~~~~~Y~~~~-~~~~~~~~~~~l~~~~~~d~v~ft 217 (286)
T 1jr2_A 139 TCGNAEKLAEYICSRESSALPLLFPCGNLKREILPKALKDKGIAMESITVYQTVA-HPGIQGNLNSYYSQQGVPASITFF 217 (286)
T ss_dssp SCSSHHHHHHHHHTSCCCSSCEEEEESCGGGCCHHHHHHTTTCCEEEEECEEEEE-CTTHHHHHHHHHHHHCSCSEEEES
T ss_pred CccCHHHHHHHHHhcccCCCeEEEECChhhHHHHHHHHHHCCCeeEEEEEEEEee-CCCcHHHHHHHHHhCCCCCEEEEE
Confidence 45566666665554434678999886653 335667778898888777532110 112 234444443 244666665
Q ss_pred CCC
Q 014769 188 NPG 190 (419)
Q Consensus 188 ~p~ 190 (419)
+|+
T Consensus 218 S~~ 220 (286)
T 1jr2_A 218 SPS 220 (286)
T ss_dssp SHH
T ss_pred ChH
Confidence 543
No 366
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=23.62 E-value=56 Score=30.75 Aligned_cols=29 Identities=24% Similarity=0.216 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 81 t~~df~~Lv~~aH~~Gi~VilD~V~NH~~ 109 (485)
T 1wpc_A 81 TRSQLQAAVTSLKNNGIQVYGDVVMNHKG 109 (485)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccC
Confidence 47899999999999999999999987653
No 367
>1wzl_A Alpha-amylase II; pullulan, GH-13, alpha-amylase family, hydrolase; 2.00A {Thermoactinomyces vulgaris} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1ji2_A 1bvz_A 1vfk_A* 3a6o_A* 1wzm_A 1jf6_A 1wzk_A 2d2o_A* 1jib_A* 1jl8_A* 1vb9_A* 1g1y_A* 1vfo_A* 1vfm_A* 1vfu_A* 1jf5_A
Probab=23.59 E-value=74 Score=30.82 Aligned_cols=29 Identities=14% Similarity=0.376 Sum_probs=25.9
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 218 t~~dfk~lv~~~H~~Gi~VilD~V~NH~~ 246 (585)
T 1wzl_A 218 DLPTFRRLVDEAHRRGIKIILDAVFNHAG 246 (585)
T ss_dssp CHHHHHHHHHHHHTTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEcCCcCC
Confidence 57899999999999999999999887654
No 368
>2ya1_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; HET: BGC GLC; 2.25A {Streptococcus pneumoniae}
Probab=23.57 E-value=52 Score=34.43 Aligned_cols=28 Identities=18% Similarity=0.285 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
.++++++++.|+++|+-||.|-+|.+..
T Consensus 561 ~~efk~lV~~~H~~GI~VIlDvV~NHt~ 588 (1014)
T 2ya1_A 561 IAEFKNLINEIHKRGMGAILDVVYNHTA 588 (1014)
T ss_dssp HHHHHHHHHHHHTTTCEEEEEECTTCCS
T ss_pred HHHHHHHHHHHHHcCCEEEEEEeccccc
Confidence 6899999999999999999999997654
No 369
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=23.53 E-value=2.6e+02 Score=24.79 Aligned_cols=38 Identities=13% Similarity=0.158 Sum_probs=21.9
Q ss_pred HHHHHHHHHhcC-CCCeEEeeCCCCCCcHHHHhhcCCEE
Q 014769 118 QAVEVILSVLAR-PGANVLLPRPGWPYYEGIAQRKQVEV 155 (419)
Q Consensus 118 ~al~~~~~~l~~-~gd~vlv~~p~~~~~~~~~~~~g~~~ 155 (419)
-++..+.....+ +|..++..+.........++.+|.+.
T Consensus 44 L~Lq~~~~~~~~g~g~~vlyId~E~s~~~~ra~~lGvd~ 82 (333)
T 3io5_A 44 FGLTMVSSYMRQYPDAVCLFYDSEFGITPAYLRSMGVDP 82 (333)
T ss_dssp HHHHHHHHHHHHCTTCEEEEEESSCCCCHHHHHHTTCCG
T ss_pred HHHHHHHHHHhcCCCceEEEEeccchhhHHHHHHhCCCH
Confidence 334444444432 47777777766654455677777653
No 370
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=23.50 E-value=58 Score=31.07 Aligned_cols=28 Identities=25% Similarity=0.380 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHhCCCeEEEccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHL 225 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~ 225 (419)
+.++++++++.|+++|+-||.|-|+.+.
T Consensus 78 t~~dfk~Lv~~aH~~Gi~VilD~V~NHt 105 (549)
T 4aie_A 78 TMADMDELISKAKEHHIKIVMDLVVNHT 105 (549)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECccCC
Confidence 4688999999999999999999998764
No 371
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=23.34 E-value=3.7e+02 Score=23.32 Aligned_cols=52 Identities=10% Similarity=0.172 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhCCCCCCCC-cEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSAD-DVYVT---LGCKQAVEVILSVLARPGANVLLPRPGWP 142 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~-~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~ 142 (419)
.+=|..+.+...+. +... -|++. +++.+++..+-.+-...-|.|++..|.|.
T Consensus 66 ~~Er~~v~~~~~~~----~~gr~pviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~ 121 (307)
T 3s5o_A 66 SSERLEVVSRVRQA----MPKNRLLLAGSGCESTQATVEMTVSMAQVGADAAMVVTPCYY 121 (307)
T ss_dssp HHHHHHHHHHHHHT----SCTTSEEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCTT
T ss_pred HHHHHHHHHHHHHH----cCCCCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEEcCCCcC
Confidence 45666666666542 2222 24443 35566666554444333499999999886
No 372
>1j0h_A Neopullulanase; beta-alpha-barrels, hydrolase; 1.90A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 1j0i_A* 1j0j_A* 1j0k_A* 1sma_A 1gvi_A*
Probab=23.30 E-value=70 Score=31.04 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 221 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 249 (588)
T 1j0h_A 221 DKETLKTLIDRCHEKGIRVMLDAVFNHCG 249 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECcCcCc
Confidence 47899999999999999999999987654
No 373
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=23.29 E-value=3.5e+02 Score=23.03 Aligned_cols=105 Identities=10% Similarity=-0.026 Sum_probs=54.7
Q ss_pred CCCCCcEEEcccHHHHHHHHHHHhcCCC--CeEEeeCCCCCCcHHHHhhc--CCEEEEEeccCCCCcccChHHH---HHh
Q 014769 104 KLSADDVYVTLGCKQAVEVILSVLARPG--ANVLLPRPGWPYYEGIAQRK--QVEVRHFDLLPERNWEVDLDAV---EAL 176 (419)
Q Consensus 104 ~~~~~~i~~t~g~~~al~~~~~~l~~~g--d~vlv~~p~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~l---~~~ 176 (419)
++++++|++..-+..+...+..++..+. ..|+........-....... ...+..+.-. .+.-+.++.. .+.
T Consensus 153 ~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~~~~~~~~~~~~~Pvl~~hG~--~D~~Vp~~~~~~~~~~ 230 (285)
T 4fhz_A 153 GLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLAPERLAEEARSKPPVLLVHGD--ADPVVPFADMSLAGEA 230 (285)
T ss_dssp TCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSCHHHHHHHCCCCCCEEEEEET--TCSSSCTHHHHHHHHH
T ss_pred CCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccCchhhhhhhhhcCcccceeeC--CCCCcCHHHHHHHHHH
Confidence 4688999998777777766666665543 45655554433322222222 2233333322 2223444433 233
Q ss_pred hcC-CccEEEEeCCCCccccCCCHHHHHHHHHHHHhC
Q 014769 177 ADK-NTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL 212 (419)
Q Consensus 177 ~~~-~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~ 212 (419)
++. ....-+..-|. .|-.++.+++..+.++.+++
T Consensus 231 L~~~g~~~~~~~y~g--~gH~i~~~~l~~~~~fL~~~ 265 (285)
T 4fhz_A 231 LAEAGFTTYGHVMKG--TGHGIAPDGLSVALAFLKER 265 (285)
T ss_dssp HHHTTCCEEEEEETT--CCSSCCHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEEECC--CCCCCCHHHHHHHHHHHHHH
Confidence 332 22333333332 24446788898888888875
No 374
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.28 E-value=1.7e+02 Score=25.28 Aligned_cols=111 Identities=13% Similarity=0.102 Sum_probs=59.1
Q ss_pred CCHHHHHHHHHHHHhhCCCC------CCCCcE-EEcccHHHHHHHHHHHhcCC---CCeEEeeCCCCCCcHHHHhhcCCE
Q 014769 85 GIPPARRAIADYLSRDLPYK------LSADDV-YVTLGCKQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVE 154 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~------~~~~~i-~~t~g~~~al~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~ 154 (419)
...+|++++.+.-.+ ++.. -.+-+| ++.+|.-..+..++...... .+.+++.+ .+......++..|++
T Consensus 63 ~~~~L~~~f~~la~~-l~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gIp 140 (286)
T 3n0v_A 63 DEAGFRAGLAERSEA-FGMAFELTAPNHRPKVVIMVSKADHCLNDLLYRQRIGQLGMDVVAVVS-NHPDLEPLAHWHKIP 140 (286)
T ss_dssp CHHHHHHHHHHHHGG-GTCEEEEECTTCCCEEEEEESSCCHHHHHHHHHHHTTSSCCEEEEEEE-SSSTTHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHH-cCCEEEeecCCCCcEEEEEEeCCCCCHHHHHHHHHCCCCCcEEEEEEe-CcHHHHHHHHHcCCC
Confidence 346788888765433 3322 122344 55566667777777776432 23333332 233445678889999
Q ss_pred EEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHH
Q 014769 155 VRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l 202 (419)
+..++....+....+ +++.+.++. ++..+++.. .+.++|.+.+
T Consensus 141 ~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dlivla~----y~~il~~~~l 184 (286)
T 3n0v_A 141 YYHFALDPKDKPGQE-RKVLQVIEETGAELVILAR----YMQVLSPELC 184 (286)
T ss_dssp EEECCCBTTBHHHHH-HHHHHHHHHHTCSEEEESS----CCSCCCHHHH
T ss_pred EEEeCCCcCCHHHHH-HHHHHHHHhcCCCEEEecc----cccccCHHHH
Confidence 887765321110011 233344433 566666643 4667884444
No 375
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=23.23 E-value=52 Score=23.02 Aligned_cols=21 Identities=14% Similarity=0.161 Sum_probs=17.9
Q ss_pred HHHHHHHHHhCCCeEEEcccc
Q 014769 202 LQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~ 222 (419)
-.+|.++++++|+.++.|..-
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEECHHH
Confidence 578999999999999998643
No 376
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=23.18 E-value=69 Score=29.57 Aligned_cols=29 Identities=14% Similarity=0.135 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 80 t~~d~~~lv~~ah~~Gi~vilD~V~NH~s 108 (424)
T 2dh2_A 80 SKEDFDSLLQSAKKKSIRVILDLTPNYRG 108 (424)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEECCTTTTS
T ss_pred CHHHHHHHHHHHHHCCCEEEEEECCCcCC
Confidence 47889999999999999999999998754
No 377
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=23.14 E-value=3.1e+02 Score=22.81 Aligned_cols=97 Identities=16% Similarity=0.111 Sum_probs=50.3
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHH---HHhhcCCEEEEEeccCCCCcccChHHHHHhhcC---
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEG---IAQRKQVEVRHFDLLPERNWEVDLDAVEALADK--- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~---~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 179 (419)
+...++||.++...=..+...|.+.|.+|++..-.-..... .+...+.++..+.+|-. |.+.+++.++.
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~~ 84 (264)
T 3ucx_A 10 TDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDIT-----DDAQVAHLVDETMK 84 (264)
T ss_dssp TTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----CHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHHH
Confidence 34457777766655566677777888888776433222222 22334566666665432 44444443321
Q ss_pred ---CccEEEEeCC-C-Ccccc--CCCHHHHHHHHHH
Q 014769 180 ---NTAAMVIINP-G-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 ---~~~~v~i~~p-~-nptG~--~~~~~~l~~i~~~ 208 (419)
+.. +++.+. . .+.+. ..+.+++++..++
T Consensus 85 ~~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~~~ 119 (264)
T 3ucx_A 85 AYGRVD-VVINNAFRVPSMKPFANTTFEHMRDAIEL 119 (264)
T ss_dssp HTSCCS-EEEECCCSCCCCCCGGGCCHHHHHHHHHH
T ss_pred HcCCCc-EEEECCCCCCCCCCchhCCHHHHHHHHHH
Confidence 223 344443 2 12222 3566777766553
No 378
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.93 E-value=3.1e+02 Score=22.42 Aligned_cols=31 Identities=19% Similarity=0.239 Sum_probs=20.8
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
..++||.++...=..+...|.+.|.+|++..
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACD 36 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEe
Confidence 4567776665555566677777888887654
No 379
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=22.89 E-value=2.7e+02 Score=22.69 Aligned_cols=30 Identities=17% Similarity=-0.020 Sum_probs=18.8
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
.++||.++...=..+...|.+.|..|++..
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~ 33 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALD 33 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEe
Confidence 466666555544555666777787777654
No 380
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=22.81 E-value=3.8e+02 Score=23.31 Aligned_cols=52 Identities=15% Similarity=0.130 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEc---ccHHHHHHHHHHHhcCCCCeEEeeCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVT---LGCKQAVEVILSVLARPGANVLLPRPGWP 142 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t---~g~~~al~~~~~~l~~~gd~vlv~~p~~~ 142 (419)
.+=|..+.+...+.-| .--|++. +++.+++..+-.+-...-|.+++..|.|.
T Consensus 60 ~~Er~~v~~~~v~~~g----rvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~~~ 114 (313)
T 3dz1_A 60 AAEAEAVATRFIKRAK----SMQVIVGVSAPGFAAMRRLARLSMDAGAAGVMIAPPPSL 114 (313)
T ss_dssp HHHHHHHHHHHHHHCT----TSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTC
T ss_pred HHHHHHHHHHHHHHcC----CCcEEEecCCCCHHHHHHHHHHHHHcCCCEEEECCCCCC
Confidence 4555556665544221 2235553 34456665544443323388888877654
No 381
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=22.75 E-value=2.9e+02 Score=22.03 Aligned_cols=13 Identities=0% Similarity=0.181 Sum_probs=6.0
Q ss_pred HHHHHHHHHhCCC
Q 014769 202 LQEIAEMARKLRV 214 (419)
Q Consensus 202 l~~i~~~~~~~~~ 214 (419)
.+..++-+++.|+
T Consensus 131 ~~~~i~~l~~~G~ 143 (196)
T 2q5c_A 131 ITTLISKVKTENI 143 (196)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHCCC
Confidence 4444444444444
No 382
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=22.63 E-value=1.7e+02 Score=28.14 Aligned_cols=77 Identities=10% Similarity=0.057 Sum_probs=44.6
Q ss_pred CCCCeEEeeCCCCCCc-------HHHHhhcCCEEEEEecc--CCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCC
Q 014769 129 RPGANVLLPRPGWPYY-------EGIAQRKQVEVRHFDLL--PERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFT 198 (419)
Q Consensus 129 ~~gd~vlv~~p~~~~~-------~~~~~~~g~~~~~~~~~--~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~ 198 (419)
+++|.|++.....++. .......|+++...... .-.+ ..|.++|...++. +++.++.++..
T Consensus 337 ~~~~~vi~s~~~~~G~~~~~~~~~~~l~~~g~~v~~~~~~~i~~Sg-Ha~~~eL~~~i~~~~Pk~vipvHGe-------- 407 (562)
T 3bk2_A 337 KPGDTVILSSSPIPGNEEAVNRVINRLYALGAYVLYPPTYKVHASG-HASQEELKLILNLTTPRFFLPWHGE-------- 407 (562)
T ss_dssp CTTCEEEECSCCCTTCHHHHHHHHHHHHHTTCEEECTTTSSSCCCS-SCCHHHHHHHHHHHCCSEEEEESBC--------
T ss_pred CCCCEEEEECCCCCCCeEehhhhcCceeeCCCEEEEccCCceEEeC-CCCHHHHHHHHHhcCCCEEEEEcCC--------
Confidence 6889999988877765 22334567776542100 0111 2355666554432 46777777632
Q ss_pred HHHHHHHHHHHHhCCC
Q 014769 199 YHHLQEIAEMARKLRV 214 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~ 214 (419)
...+.++.+++++.|+
T Consensus 408 ~~~~~~~~~~~~~~g~ 423 (562)
T 3bk2_A 408 VRHQMNFKWLAESMSR 423 (562)
T ss_dssp HHHHHHHHHHHHTSSS
T ss_pred HHHHHHHHHHHHHcCC
Confidence 2346677778877664
No 383
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.50 E-value=2.8e+02 Score=23.18 Aligned_cols=54 Identities=15% Similarity=0.057 Sum_probs=29.4
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEecc
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLL 161 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~ 161 (419)
..++||.++...=..+...|.+.|..|++..-.-.......+..+.++..+.+|
T Consensus 7 k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D 60 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVAD 60 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcC
Confidence 457777666555556667777788887765432222222233333345555544
No 384
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=22.43 E-value=2.1e+02 Score=24.01 Aligned_cols=98 Identities=13% Similarity=0.100 Sum_probs=50.9
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCC-CC---cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGW-PY---YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~-~~---~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
+...++||.++...=..+...|.+.|..|++..-.- .. ....+...+.++..+.+|-. |.+.+.+.++.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 91 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIR-----QVPEIVKLFDQAV 91 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCC-----CHHHHHHHHHHHH
Confidence 344567776666555666777888898887643221 11 12223344666777766432 44555444331
Q ss_pred ---CccEEEEeCCC-Ccccc--CCCHHHHHHHHHH
Q 014769 180 ---NTAAMVIINPG-NPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 ---~~~~v~i~~p~-nptG~--~~~~~~l~~i~~~ 208 (419)
...-+++.+.. .+.+. ..+.+++++..+.
T Consensus 92 ~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~ 126 (270)
T 3is3_A 92 AHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSL 126 (270)
T ss_dssp HHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 12223444432 22222 3477777776653
No 385
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=22.38 E-value=3.3e+02 Score=22.44 Aligned_cols=93 Identities=15% Similarity=0.107 Sum_probs=44.7
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEeccCCCCcccChHHHHHhhcC------
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLLPERNWEVDLDAVEALADK------ 179 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~------ 179 (419)
.++||.++...=..+...|.+.|.+|++..-.-...... +...+.++..+.+|-. |.+.+++++..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~-----~~~~v~~~~~~~~~~~g 78 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVS-----DRDQVFAAVEQARKTLG 78 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTT-----SHHHHHHHHHHHHHHTT
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCC-----CHHHHHHHHHHHHHHhC
Confidence 466666555555566667777888877653221111111 1223555666655422 44555444431
Q ss_pred CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 ~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+.. +++.+.. .+.+ ...+.+++++..+
T Consensus 79 ~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 108 (256)
T 1geg_A 79 GFD-VIVNNAGVAPSTPIESITPEIVDKVYN 108 (256)
T ss_dssp CCC-EEEECCCCCCCBCGGGCCHHHHHHHHH
T ss_pred CCC-EEEECCCCCCCCChhhCCHHHHHHHHH
Confidence 233 3444432 2222 1246666666554
No 386
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=22.27 E-value=2.3e+02 Score=24.54 Aligned_cols=54 Identities=11% Similarity=0.080 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+-...-|.|++..|.|..
T Consensus 64 ~eEr~~v~~~~~~~~~---grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~ 120 (301)
T 1xky_A 64 SEEKVALYRHVVSVVD---KRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYYNK 120 (301)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 3455555555543211 1123655443 4666665544433233999999998863
No 387
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=22.07 E-value=1.9e+02 Score=25.25 Aligned_cols=111 Identities=8% Similarity=0.061 Sum_probs=56.7
Q ss_pred CCHHHHHHHHHHHHhhCCCCC------CCCcE-EEcccHHHHHHHHHHHhcCC---CCeEEeeCCCCCCcHHHHhhcCCE
Q 014769 85 GIPPARRAIADYLSRDLPYKL------SADDV-YVTLGCKQAVEVILSVLARP---GANVLLPRPGWPYYEGIAQRKQVE 154 (419)
Q Consensus 85 g~~~lr~~ia~~l~~~~~~~~------~~~~i-~~t~g~~~al~~~~~~l~~~---gd~vlv~~p~~~~~~~~~~~~g~~ 154 (419)
...+|++++.+.-.+ ++..+ .+-+| ++.+|.-..+..++...... .+.+++.+ .+......++..|++
T Consensus 78 ~~~~L~~~l~~la~~-l~m~~~l~~~~~~~ri~vl~Sg~g~nl~~ll~~~~~g~l~~~I~~Vis-n~~~~~~~A~~~gIp 155 (302)
T 3o1l_A 78 DLDGFREAFTPIAEE-FSMDWRITDSAQKKRVVLMASRESHCLADLLHRWHSDELDCDIACVIS-NHQDLRSMVEWHDIP 155 (302)
T ss_dssp CHHHHHHHHHHHHHH-HTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHTTCSCSEEEEEEE-SSSTTHHHHHTTTCC
T ss_pred CHHHHHHHHHHHHHH-hCCeeeecccCCCcEEEEEEeCCchhHHHHHHHHHCCCCCcEEEEEEE-CcHHHHHHHHHcCCC
Confidence 346788877665433 33221 12344 45566666777777766432 23333332 223345678888998
Q ss_pred EEEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHH
Q 014769 155 VRHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l 202 (419)
+..++....+....+ +++.+.+++ ++..+++.. .+.++|.+.+
T Consensus 156 ~~~~~~~~~~r~~~~-~~~~~~l~~~~~DliVlag----ym~IL~~~~l 199 (302)
T 3o1l_A 156 YYHVPVDPKDKEPAF-AEVSRLVGHHQADVVVLAR----YMQILPPQLC 199 (302)
T ss_dssp EEECCCCSSCCHHHH-HHHHHHHHHTTCSEEEESS----CCSCCCTTHH
T ss_pred EEEcCCCcCCHHHHH-HHHHHHHHHhCCCEEEHhH----hhhhcCHHHH
Confidence 877654321111111 233344433 566666643 4566774434
No 388
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=22.01 E-value=2.2e+02 Score=24.54 Aligned_cols=55 Identities=16% Similarity=0.267 Sum_probs=30.1
Q ss_pred CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH---hhcCCccEEEEeCCC
Q 014769 130 PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA---LADKNTAAMVIINPG 190 (419)
Q Consensus 130 ~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~v~i~~p~ 190 (419)
++..+++..+.| ..+++.+|++...+.. .+..+++..|.+ .++.+...+++..|+
T Consensus 189 ~~~~~v~~H~af---~Yf~~~yGl~~~~~~~---~~~eps~~~l~~l~~~ik~~~v~~If~e~~ 246 (291)
T 1pq4_A 189 PQRKFIVFHPSW---AYFARDYNLVQIPIEV---EGQEPSAQELKQLIDTAKENNLTMVFGETQ 246 (291)
T ss_dssp SCCEEEESSCCC---HHHHHHTTCEEEESCB---TTBCCCHHHHHHHHHHHHTTTCCEEEEETT
T ss_pred CCCEEEEECCch---HHHHHHCCCEEeeccc---CCCCCCHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 567788877765 4567889998765432 123455554443 344333333444444
No 389
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=21.85 E-value=2.8e+02 Score=22.24 Aligned_cols=58 Identities=3% Similarity=-0.005 Sum_probs=37.8
Q ss_pred HHHHhhcCCEEEEEeccCCCCcccChHHHHHhhc-CCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCC
Q 014769 145 EGIAQRKQVEVRHFDLLPERNWEVDLDAVEALAD-KNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLR 213 (419)
Q Consensus 145 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~ 213 (419)
...+...|.++..+.. ....+.+.+++. .++.+|.++.-..+ +.+.++++++.+++.+
T Consensus 109 a~~l~~~G~~v~~LG~------~vp~~~l~~~~~~~~~d~v~lS~~~~~-----~~~~~~~~i~~l~~~~ 167 (210)
T 1y80_A 109 AMMLESGGFTVYNLGV------DIEPGKFVEAVKKYQPDIVGMSALLTT-----TMMNMKSTIDALIAAG 167 (210)
T ss_dssp HHHHHHTTCEEEECCS------SBCHHHHHHHHHHHCCSEEEEECCSGG-----GTHHHHHHHHHHHHTT
T ss_pred HHHHHHCCCEEEECCC------CCCHHHHHHHHHHcCCCEEEEeccccc-----cHHHHHHHHHHHHhcC
Confidence 4556778999887653 357788777664 36677776653222 2456888888888754
No 390
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=21.84 E-value=4.7e+02 Score=24.01 Aligned_cols=80 Identities=11% Similarity=-0.144 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHHHHhhCCCCCCCCcEEEcccHHHHHHHHHHHhcC-CCCeEEeeCCCCCC---------------cHH
Q 014769 83 NSGIPPARRAIADYLSRDLPYKLSADDVYVTLGCKQAVEVILSVLAR-PGANVLLPRPGWPY---------------YEG 146 (419)
Q Consensus 83 ~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~-~gd~vlv~~p~~~~---------------~~~ 146 (419)
+.|....-..-.+|.+....+.-.+..++||.+++..=..+...|.. .|-.|++..-.-.. ...
T Consensus 37 p~g~~~~v~~qi~y~~~~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~ 116 (422)
T 3s8m_A 37 PLGCERNVLEQIAATRARGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDK 116 (422)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHhhccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHH
Confidence 44555433334566654322222344566666665544555666766 78777654221111 113
Q ss_pred HHhhcCCEEEEEeccC
Q 014769 147 IAQRKQVEVRHFDLLP 162 (419)
Q Consensus 147 ~~~~~g~~~~~~~~~~ 162 (419)
.+...|.....+..|-
T Consensus 117 ~~~~~G~~a~~i~~Dv 132 (422)
T 3s8m_A 117 HAKAAGLYSKSINGDA 132 (422)
T ss_dssp HHHHTTCCEEEEESCT
T ss_pred HHHhcCCcEEEEEecC
Confidence 4455677777777653
No 391
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=21.76 E-value=97 Score=29.99 Aligned_cols=29 Identities=17% Similarity=0.392 Sum_probs=26.1
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-++.+..
T Consensus 217 t~~df~~lv~~~H~~Gi~VilD~V~NH~~ 245 (583)
T 1ea9_C 217 DKDTLKKLVDLCHERGIRVLLDAVFNHSG 245 (583)
T ss_dssp CHHHHHHHHHHHTTTTCEEEEECCCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccccCC
Confidence 57899999999999999999999988654
No 392
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=21.76 E-value=2.1e+02 Score=24.82 Aligned_cols=88 Identities=14% Similarity=0.014 Sum_probs=45.6
Q ss_pred EEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCCccEEEE
Q 014769 110 VYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKNTAAMVI 186 (419)
Q Consensus 110 i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i 186 (419)
|++.. ++.+++..+-.+-...-|.|++..|.|....+--.. --...+.++. +.+.+++
T Consensus 72 viaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y~~~s~~~l~-----------------~~f~~va~a~--~lPiilY 132 (297)
T 2rfg_A 72 VIAGAGSNNPVEAVRYAQHAQQAGADAVLCVAGYYNRPSQEGLY-----------------QHFKMVHDAI--DIPIIVY 132 (297)
T ss_dssp BEEECCCSSHHHHHHHHHHHHHHTCSEEEECCCTTTCCCHHHHH-----------------HHHHHHHHHC--SSCEEEE
T ss_pred EEEccCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCCCCHHHHH-----------------HHHHHHHHhc--CCCEEEE
Confidence 55543 346666655444333349999999988632110000 0012222222 3456666
Q ss_pred eCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcc
Q 014769 187 INPGNPCGNVFTYHHLQEIAEMARKLRVMVVADE 220 (419)
Q Consensus 187 ~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De 220 (419)
..|.. ||..++.+.+.+|++ -.|+.=|=|.
T Consensus 133 n~P~~-tg~~l~~~~~~~La~---~pnIvgiKds 162 (297)
T 2rfg_A 133 NIPPR-AVVDIKPETMARLAA---LPRIVGVKDA 162 (297)
T ss_dssp ECHHH-HSCCCCHHHHHHHHT---STTEEEEEEC
T ss_pred eCccc-cCCCCCHHHHHHHHc---CCCEEEEEeC
Confidence 66664 788888666666653 2344444443
No 393
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=21.72 E-value=3.6e+02 Score=22.71 Aligned_cols=98 Identities=17% Similarity=0.106 Sum_probs=52.6
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----------cHHHHhhcCCEEEEEeccCCCCcccChHHHH
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----------YEGIAQRKQVEVRHFDLLPERNWEVDLDAVE 174 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~ 174 (419)
++...++||.++...=..+...|.+.|.+|++..-.-.. ....+...+.++..+.+|-. |.+.++
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~ 81 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIR-----DGDAVA 81 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTT-----SHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHH
Confidence 344567777776665566777788888888766433221 12223444677777776432 444444
Q ss_pred HhhcC------CccEEEEeCC-CCcccc--CCCHHHHHHHHHH
Q 014769 175 ALADK------NTAAMVIINP-GNPCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 175 ~~~~~------~~~~v~i~~p-~nptG~--~~~~~~l~~i~~~ 208 (419)
+.+.. +.. +++.+. ..+.+. ..+.++++++.++
T Consensus 82 ~~~~~~~~~~g~id-~lvnnAg~~~~~~~~~~~~~~~~~~~~v 123 (285)
T 3sc4_A 82 AAVAKTVEQFGGID-ICVNNASAINLGSIEEVPLKRFDLMNGI 123 (285)
T ss_dssp HHHHHHHHHHSCCS-EEEECCCCCCCCCTTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCC-EEEECCCCCCCCCcccCCHHHHHHHHHH
Confidence 43321 233 344443 222222 3577777776653
No 394
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=21.68 E-value=3.5e+02 Score=22.43 Aligned_cols=98 Identities=11% Similarity=0.032 Sum_probs=50.4
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEee-CCCCCCcH---HHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLP-RPGWPYYE---GIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~-~p~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
....++||.++...=..+...|.+.|.+|++. ...-.... ..+...+.++..+.+|-. |.+.++++++.
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~~ 81 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLT-----NAAEVEAAISAAA 81 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTT-----CHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCC-----CHHHHHHHHHHHH
Confidence 34467777666665566677777889888776 33222211 122334556666665432 44555444331
Q ss_pred ---CccEEEEeCCC-C-cccc--CCCHHHHHHHHHH
Q 014769 180 ---NTAAMVIINPG-N-PCGN--VFTYHHLQEIAEM 208 (419)
Q Consensus 180 ---~~~~v~i~~p~-n-ptG~--~~~~~~l~~i~~~ 208 (419)
...-+++.+.. . +.+. ..+.+++++..++
T Consensus 82 ~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~v 117 (259)
T 3edm_A 82 DKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDV 117 (259)
T ss_dssp HHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHH
T ss_pred HHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHH
Confidence 12334444442 1 2222 3566777766653
No 395
>3auf_A Glycinamide ribonucleotide transformylase 1; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; 2.07A {Symbiobacterium toebii}
Probab=21.63 E-value=2.3e+02 Score=23.41 Aligned_cols=88 Identities=14% Similarity=0.060 Sum_probs=44.2
Q ss_pred EEEcccHHHHHHHHHHHhcCC--C-CeE-EeeCCCCCCcHHHHhhcCCEEEEEeccCCCC-cccChHHHHHhhc-CCccE
Q 014769 110 VYVTLGCKQAVEVILSVLARP--G-ANV-LLPRPGWPYYEGIAQRKQVEVRHFDLLPERN-WEVDLDAVEALAD-KNTAA 183 (419)
Q Consensus 110 i~~t~g~~~al~~~~~~l~~~--g-d~v-lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~-~~~~~ 183 (419)
+++.+|+.+.+..++..+... + +.+ ++.++.-......++..|+++..++...-.+ ...+ +++.+.++ -++..
T Consensus 26 ~~l~SG~g~~~~~~l~~l~~~~~~~~I~~Vvt~~~~~~~~~~A~~~gIp~~~~~~~~~~~r~~~~-~~~~~~l~~~~~Dl 104 (229)
T 3auf_A 26 GVLISGSGTNLQAILDGCREGRIPGRVAVVISDRADAYGLERARRAGVDALHMDPAAYPSRTAFD-AALAERLQAYGVDL 104 (229)
T ss_dssp EEEESSCCHHHHHHHHHHHTTSSSEEEEEEEESSTTCHHHHHHHHTTCEEEECCGGGSSSHHHHH-HHHHHHHHHTTCSE
T ss_pred EEEEeCCcHHHHHHHHHHHhCCCCCeEEEEEcCCCchHHHHHHHHcCCCEEEECcccccchhhcc-HHHHHHHHhcCCCE
Confidence 345566666677777777654 2 222 3334222234567888898877654211000 0011 22333333 25666
Q ss_pred EEEeCCCCccccCCCHHHH
Q 014769 184 MVIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 184 v~i~~p~nptG~~~~~~~l 202 (419)
+++.. .|.+++.+.+
T Consensus 105 iv~ag----y~~IL~~~~l 119 (229)
T 3auf_A 105 VCLAG----YMRLVRGPML 119 (229)
T ss_dssp EEESS----CCSCCCHHHH
T ss_pred EEEcC----hhHhCCHHHH
Confidence 66543 4677884444
No 396
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=21.55 E-value=2e+02 Score=24.81 Aligned_cols=54 Identities=11% Similarity=-0.012 Sum_probs=28.5
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEcc---cHHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTL---GCKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~---g~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++.. ++.+++..+-.+-...-|.|++..|.|..
T Consensus 56 ~~Er~~v~~~~~~~~~---grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 112 (293)
T 1f6k_A 56 TEEKKEIFRIAKDEAK---DQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFYYK 112 (293)
T ss_dssp HHHHHHHHHHHHHHHT---TSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCC
Confidence 3445555555443211 112355543 34666665544433234899999998863
No 397
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=21.53 E-value=1.8e+02 Score=25.21 Aligned_cols=111 Identities=11% Similarity=0.141 Sum_probs=58.1
Q ss_pred CHHHHHHHHHHHHhhCCCC------CCCCcE-EEcccHHHHHHHHHHHhcC---CCCeEEeeCCCCCCcHHHHhhcCCEE
Q 014769 86 IPPARRAIADYLSRDLPYK------LSADDV-YVTLGCKQAVEVILSVLAR---PGANVLLPRPGWPYYEGIAQRKQVEV 155 (419)
Q Consensus 86 ~~~lr~~ia~~l~~~~~~~------~~~~~i-~~t~g~~~al~~~~~~l~~---~gd~vlv~~p~~~~~~~~~~~~g~~~ 155 (419)
..+|++++.+.-.+ ++.. -.+.+| ++.+|.-..+..++..... +.+.+++.+ .+......++..|+++
T Consensus 69 ~~~L~~~f~~la~~-~~m~~~l~~~~~~~ri~vl~Sg~g~~l~~ll~~~~~g~l~~~i~~Vis-n~~~~~~~A~~~gIp~ 146 (292)
T 3lou_A 69 VDALRREFEPIAER-FRMQWAIHDVAARPKVLIMVSKLEHCLADLLFRWKMGELKMDIVGIVS-NHPDFAPLAAQHGLPF 146 (292)
T ss_dssp HHHHHHHHHHHHHH-HTCEEEEEETTSCCEEEEEECSCCHHHHHHHHHHHHTSSCCEEEEEEE-SSSTTHHHHHHTTCCE
T ss_pred HHHHHHHHHHHHHh-cCcEEEeeccCCCCEEEEEEcCCCcCHHHHHHHHHcCCCCcEEEEEEe-CcHHHHHHHHHcCCCE
Confidence 46777777665333 3322 112344 5556666677777776543 233333332 2333456788899998
Q ss_pred EEEeccCCCCcccChHHHHHhhcC-CccEEEEeCCCCccccCCCHHHHH
Q 014769 156 RHFDLLPERNWEVDLDAVEALADK-NTAAMVIINPGNPCGNVFTYHHLQ 203 (419)
Q Consensus 156 ~~~~~~~~~~~~~~~~~l~~~~~~-~~~~v~i~~p~nptG~~~~~~~l~ 203 (419)
..++....+....+ +++.+.+++ ++..+++.. .+.++|.+.++
T Consensus 147 ~~~~~~~~~r~~~~-~~~~~~l~~~~~Dlivla~----y~~il~~~~l~ 190 (292)
T 3lou_A 147 RHFPITADTKAQQE-AQWLDVFETSGAELVILAR----YMQVLSPEASA 190 (292)
T ss_dssp EECCCCSSCHHHHH-HHHHHHHHHHTCSEEEESS----CCSCCCHHHHH
T ss_pred EEeCCCcCCHHHHH-HHHHHHHHHhCCCEEEecC----chhhCCHHHHh
Confidence 87765321110111 233344433 566766643 46778844443
No 398
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=21.42 E-value=3.6e+02 Score=22.48 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=52.6
Q ss_pred CcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcCC-ccEEEE
Q 014769 108 DDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADKN-TAAMVI 186 (419)
Q Consensus 108 ~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~v~i 186 (419)
..+++|.+++..=..+...|.+.|-.|++.+-.-... ....+..+..+.+|-. |.+.+++.++.- ..-+++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~---~~~~~~~~~~~~~Dv~-----~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV---HAPRHPRIRREELDIT-----DSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST---TSCCCTTEEEEECCTT-----CHHHHHHHHHHCSCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH---hhhhcCCeEEEEecCC-----CHHHHHHHHHhcCCCCEEE
Confidence 4567777666666677778888998888765332211 1223344555555422 455566555431 222455
Q ss_pred eCCC-CccccCCCHHHHHHHHHH
Q 014769 187 INPG-NPCGNVFTYHHLQEIAEM 208 (419)
Q Consensus 187 ~~p~-nptG~~~~~~~l~~i~~~ 208 (419)
+|.. +.....++.++|+++.++
T Consensus 84 NNAGi~~~~~~~~~~~w~~~~~v 106 (242)
T 4b79_A 84 NNAGISRDREEYDLATFERVLRL 106 (242)
T ss_dssp ECCCCCCGGGGGSHHHHHHHHHH
T ss_pred ECCCCCCCcccCCHHHHHHHHHH
Confidence 5542 333345788888887765
No 399
>3av3_A Phosphoribosylglycinamide formyltransferase; structural genomics, riken structural genomics/proteomics in RSGI, rossmann fold; HET: MSE; 1.70A {Geobacillus kaustophilus}
Probab=21.34 E-value=2.3e+02 Score=23.13 Aligned_cols=87 Identities=13% Similarity=0.015 Sum_probs=44.2
Q ss_pred EEcccHHHHHHHHHHHhcCC--CCeE--EeeCCCCCCcHHHHhhcCCEEEEEeccCCCC-cccChHHHHHhhcC-CccEE
Q 014769 111 YVTLGCKQAVEVILSVLARP--GANV--LLPRPGWPYYEGIAQRKQVEVRHFDLLPERN-WEVDLDAVEALADK-NTAAM 184 (419)
Q Consensus 111 ~~t~g~~~al~~~~~~l~~~--gd~v--lv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~~~l~~~~~~-~~~~v 184 (419)
++.+|+.+.+..++..+... +-.| ++.++.-......++..|+++..++...-.+ ...+ +++.+.++. ++..+
T Consensus 8 vl~sG~g~~~~~~l~~l~~~~l~~~I~~Vit~~~~~~v~~~A~~~gIp~~~~~~~~~~~~~~~~-~~~~~~l~~~~~Dli 86 (212)
T 3av3_A 8 VFASGSGTNFQAIVDAAKRGDLPARVALLVCDRPGAKVIERAARENVPAFVFSPKDYPSKAAFE-SEILRELKGRQIDWI 86 (212)
T ss_dssp EECCSSCHHHHHHHHHHHTTCCCEEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHH-HHHHHHHHHTTCCEE
T ss_pred EEEECCcHHHHHHHHHHHhCCCCCeEEEEEeCCCCcHHHHHHHHcCCCEEEeCcccccchhhhH-HHHHHHHHhcCCCEE
Confidence 45566666666777777654 2233 3444333345667888898877654211000 0011 123333332 56666
Q ss_pred EEeCCCCccccCCCHHHH
Q 014769 185 VIINPGNPCGNVFTYHHL 202 (419)
Q Consensus 185 ~i~~p~nptG~~~~~~~l 202 (419)
++.. .|.+++.+.+
T Consensus 87 v~a~----y~~il~~~~l 100 (212)
T 3av3_A 87 ALAG----YMRLIGPTLL 100 (212)
T ss_dssp EESS----CCSCCCHHHH
T ss_pred EEch----hhhhCCHHHH
Confidence 6543 4677884444
No 400
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=21.24 E-value=3.5e+02 Score=22.58 Aligned_cols=57 Identities=12% Similarity=0.014 Sum_probs=31.0
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHH---HhhcCCEEEEEecc
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGI---AQRKQVEVRHFDLL 161 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~---~~~~g~~~~~~~~~ 161 (419)
+....++||.++...=..+...|.+.|..|++..-.-...... +...+.++..+.+|
T Consensus 29 l~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D 88 (272)
T 1yb1_A 29 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVD 88 (272)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECC
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEee
Confidence 3345677776665555666677777888877654322111111 22235556666654
No 401
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=21.20 E-value=3.5e+02 Score=22.31 Aligned_cols=30 Identities=23% Similarity=0.166 Sum_probs=19.2
Q ss_pred cEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 109 DVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 109 ~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
.++||.++...=..+...|.+.|.+|++..
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 33 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVAD 33 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEE
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 466666655555566666777787777653
No 402
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=21.08 E-value=81 Score=26.18 Aligned_cols=35 Identities=17% Similarity=0.181 Sum_probs=26.8
Q ss_pred ccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 181 TAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 181 ~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+++.++|.--|+.|.... +.++.+++++||+.++.
T Consensus 178 ~Pa~VicEi~~ddG~mar---~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 178 VPITTICEMMGDDGNAMS---KNETKRYAEKHNLIYLS 212 (227)
T ss_dssp CSEEEEEEEBCTTSSBCC---HHHHHHHHHHHTCCEEE
T ss_pred CceEEEEEEeCCCCCcCC---HHHHHHHHHHcCCcEEE
Confidence 456666766678899999 66777778899987774
No 403
>3dhu_A Alpha-amylase; structural genomics, hydrolase, glycosidase, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum}
Probab=21.07 E-value=68 Score=29.76 Aligned_cols=29 Identities=28% Similarity=0.472 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||+|-++.+..
T Consensus 82 t~~~~~~lv~~~h~~Gi~vi~D~V~NH~~ 110 (449)
T 3dhu_A 82 TLADFKALTDRAHELGMKVMLDIVYNHTS 110 (449)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSEEC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEccCcCc
Confidence 57899999999999999999999886543
No 404
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta sandwich, transferase; 2.30A {Escherichia coli} SCOP: b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Probab=21.05 E-value=1e+02 Score=30.01 Aligned_cols=31 Identities=23% Similarity=0.193 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHHhCCCeEEEccccccccc
Q 014769 197 FTYHHLQEIAEMARKLRVMVVADEVYGHLTF 227 (419)
Q Consensus 197 ~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 227 (419)
-+.++++++++.|+++|+-||.|-++.+...
T Consensus 202 Gt~~~~~~lv~~~H~~Gi~VilD~V~NH~~~ 232 (617)
T 1m7x_A 202 GTRDDFRYFIDAAHAAGLNVILDWVPGHFPT 232 (617)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEEEECTTSCCC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEecCcccC
Confidence 3589999999999999999999999987643
No 405
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=20.99 E-value=77 Score=29.82 Aligned_cols=28 Identities=25% Similarity=0.441 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 199 YHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 199 ~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
.++++++++.|+++|+-||.|-|+.+..
T Consensus 102 ~~df~~Lv~~aH~~Gi~VilD~V~NH~s 129 (488)
T 2wc7_A 102 NEAFKELLDAAHQRNIKVVLDGVFNHSS 129 (488)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCCcCC
Confidence 5789999999999999999999887643
No 406
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=20.92 E-value=3.3e+02 Score=23.93 Aligned_cols=36 Identities=22% Similarity=0.154 Sum_probs=30.3
Q ss_pred CCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769 189 PGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (419)
Q Consensus 189 p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 224 (419)
..+|.|-..+.+++.++++.|+++|+-+++|--|+.
T Consensus 49 w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd 84 (332)
T 1hjs_A 49 WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSD 84 (332)
T ss_dssp CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSS
T ss_pred eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCC
Confidence 367778888989999999999999999999965543
No 407
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=20.75 E-value=1.1e+02 Score=26.72 Aligned_cols=49 Identities=12% Similarity=0.191 Sum_probs=33.9
Q ss_pred hHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhC-CCeEEEcccccc
Q 014769 170 LDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKL-RVMVVADEVYGH 224 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~-~~~li~De~~~~ 224 (419)
.+.++++++.+.+.+++.++. . +.++..++.+.|+++ |+.+|-+.+.+.
T Consensus 85 ~~~~~e~i~~Gi~~iv~~t~G----~--~~~~~~~l~~~a~~~~gi~liGPnc~Gi 134 (305)
T 2fp4_A 85 AAAINEAIDAEVPLVVCITEG----I--PQQDMVRVKHRLLRQGKTRLIGPNCPGV 134 (305)
T ss_dssp HHHHHHHHHTTCSEEEECCCC----C--CHHHHHHHHHHHTTCSSCEEECSSSCEE
T ss_pred HHHHHHHHHCCCCEEEEECCC----C--ChHHHHHHHHHHHhcCCcEEEeCCCCeE
Confidence 455666666677776665553 2 445577999999999 999886665544
No 408
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=20.74 E-value=3.7e+02 Score=22.37 Aligned_cols=97 Identities=15% Similarity=0.062 Sum_probs=48.3
Q ss_pred CCCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCCcHHHHh---hc--CCEEEEEeccCCCCcccChHHHHHhhcC
Q 014769 105 LSADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPYYEGIAQ---RK--QVEVRHFDLLPERNWEVDLDAVEALADK 179 (419)
Q Consensus 105 ~~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~~~~~~~---~~--g~~~~~~~~~~~~~~~~~~~~l~~~~~~ 179 (419)
+....++||.++...=..+...|.+.|.+|++..-.-........ .. +..+..+..|-. +.+.+++.++.
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~-----~~~~~~~~~~~ 82 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLG-----TEQGCQDVIEK 82 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTT-----SHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCC-----CHHHHHHHHHh
Confidence 344567777776665566677777888888776433222212111 11 345555554322 44555554432
Q ss_pred --CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 180 --NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 180 --~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+.. +++.+.. ...+ ...+.+++++..+
T Consensus 83 ~g~id-~lv~nAg~~~~~~~~~~~~~~~~~~~~ 114 (267)
T 3t4x_A 83 YPKVD-ILINNLGIFEPVEYFDIPDEDWFKLFE 114 (267)
T ss_dssp CCCCS-EEEECCCCCCCCCGGGSCHHHHHHHHH
T ss_pred cCCCC-EEEECCCCCCCCccccCCHHHHHHHHH
Confidence 233 3444432 1111 2356677665554
No 409
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=20.70 E-value=3.9e+02 Score=22.64 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=51.4
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCCCCC----cHHHHhhcCCEEEEEeccCCCCcccChHHHHHhhcC--
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPGWPY----YEGIAQRKQVEVRHFDLLPERNWEVDLDAVEALADK-- 179 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~~~~----~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~-- 179 (419)
+...++||.++...=..+...|.+.|.+|++..-.-.. ........+.++..+.+|-. |.+.+++++..
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~~~v~~~~~~~~ 120 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLS-----DEQHCKDIVQETV 120 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTT-----SHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCC-----CHHHHHHHHHHHH
Confidence 34567777776666666777788889888765433221 12223344666777765432 44444443321
Q ss_pred ---CccEEEEeCCC--Cccc--cCCCHHHHHHHHHH
Q 014769 180 ---NTAAMVIINPG--NPCG--NVFTYHHLQEIAEM 208 (419)
Q Consensus 180 ---~~~~v~i~~p~--nptG--~~~~~~~l~~i~~~ 208 (419)
...-+++.+.. .+.+ ...+.++++++.++
T Consensus 121 ~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~v 156 (291)
T 3ijr_A 121 RQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRI 156 (291)
T ss_dssp HHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHH
T ss_pred HHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHH
Confidence 12223444432 1222 12477777776654
No 410
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=20.57 E-value=2.8e+02 Score=23.96 Aligned_cols=97 Identities=14% Similarity=0.193 Sum_probs=50.1
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeCCC-------CCC-----c---HHHHhhcCCEEEEEeccCCCCcccCh
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPRPG-------WPY-----Y---EGIAQRKQVEVRHFDLLPERNWEVDL 170 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~p~-------~~~-----~---~~~~~~~g~~~~~~~~~~~~~~~~~~ 170 (419)
....++||.++...=..+...|.+.|..|++.+-. +.. . ...+...+.++..+.+|-. |.
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~-----d~ 119 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVR-----DL 119 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTT-----CH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCC-----CH
Confidence 33457777766666566777788889888775322 110 0 1122334666666665432 44
Q ss_pred HHHHHhhcC-----CccEEEEeCCC-Cccc--cCCCHHHHHHHHH
Q 014769 171 DAVEALADK-----NTAAMVIINPG-NPCG--NVFTYHHLQEIAE 207 (419)
Q Consensus 171 ~~l~~~~~~-----~~~~v~i~~p~-nptG--~~~~~~~l~~i~~ 207 (419)
+.+++.++. ...-+++.+.. .+.+ ...+.++++++.+
T Consensus 120 ~~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 3oec_A 120 ASLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQ 164 (317)
T ss_dssp HHHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHH
Confidence 444444321 12224444442 2222 2357777776665
No 411
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=20.57 E-value=4.1e+02 Score=22.92 Aligned_cols=88 Identities=13% Similarity=0.269 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC---------cHHHHhhcCCE
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY---------YEGIAQRKQVE 154 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~---------~~~~~~~~g~~ 154 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+-...-|.|++..|.|.. |..++...+.+
T Consensus 68 ~~Er~~v~~~~~~~~~---grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a~~lP 144 (304)
T 3cpr_A 68 AAEKLELLKAVREEVG---DRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAATEVP 144 (304)
T ss_dssp HHHHHHHHHHHHHHHT---TTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHHCCSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHhcCCC
Confidence 4455555555543211 1123555443 4666665554443233999999998853 23344445566
Q ss_pred EEEEeccCCCCcccChHHHHHhh
Q 014769 155 VRHFDLLPERNWEVDLDAVEALA 177 (419)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~l~~~~ 177 (419)
+..|+.+...+..++++.+.++.
T Consensus 145 iilYn~P~~tg~~l~~~~~~~La 167 (304)
T 3cpr_A 145 ICLYDIPGRSGIPIESDTMRRLS 167 (304)
T ss_dssp EEEEECHHHHSSCCCHHHHHHHT
T ss_pred EEEEeCccccCcCCCHHHHHHHH
Confidence 66665433233445666665554
No 412
>2fki_A Protein YJBR; NESG, GFT-alpha-beta, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium; NMR {Escherichia coli} SCOP: d.198.3.1
Probab=20.39 E-value=1.7e+02 Score=21.56 Aligned_cols=47 Identities=17% Similarity=0.132 Sum_probs=33.0
Q ss_pred HHHHHHHHhcCeEeecCCCCCCCCeEEEEe-e-cCHHHHHHHHHHHHHHH
Q 014769 365 EFALKLAKEESVIVTPGIYVGLKNWLRIAF-C-AEPSALKDGLGRMKAFC 412 (419)
Q Consensus 365 ~~~~~ll~~~gv~v~~g~~~~~~~~~Ris~-~-~~~~~l~~~l~~l~~~~ 412 (419)
+.+..|.++++= +.||..++..+|+-+.+ + .++++|.++|+.=-+..
T Consensus 55 e~~~~L~~~~~~-i~PayhmnK~hWisv~ld~~v~~~~l~~lI~~Sy~lv 103 (126)
T 2fki_A 55 ELAELLRQQHSD-VRPSRHLNKAHWSTVYLDGSLPDSQIYYLVDASYQQA 103 (126)
T ss_dssp HHHHHHHHSCST-TCCCCSSCTTTEEEEECTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhCCC-eecCCcCCCceeEEEEcCCCCCHHHHHHHHHHHHHHH
Confidence 455666666652 45998888899999988 3 67888888876544333
No 413
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=20.31 E-value=3.5e+02 Score=21.99 Aligned_cols=32 Identities=19% Similarity=0.183 Sum_probs=20.8
Q ss_pred CCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 107 ADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 107 ~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
...++||.++...=..+...|.+.|..|++..
T Consensus 6 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~ 37 (251)
T 1zk4_A 6 GKVAIITGGTLGIGLAIATKFVEEGAKVMITG 37 (251)
T ss_dssp TCEEEETTTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEe
Confidence 34567776665555566677777887777654
No 414
>1zja_A Trehalulose synthase; sucrose isomerase, alpha-amylase family, (beta/alpha)8 barrel; 1.60A {Pseudomonas mesoacidophila} PDB: 1zjb_A 2pwd_A* 2pwh_A 2pwg_A 2pwe_A* 2pwf_A* 3gbe_A* 3gbd_A*
Probab=20.30 E-value=84 Score=30.21 Aligned_cols=29 Identities=17% Similarity=0.263 Sum_probs=25.5
Q ss_pred CHHHHHHHHHHHHhCCCeEEEcccccccc
Q 014769 198 TYHHLQEIAEMARKLRVMVVADEVYGHLT 226 (419)
Q Consensus 198 ~~~~l~~i~~~~~~~~~~li~De~~~~~~ 226 (419)
+.++++++++.|+++|+-||.|-|+.+..
T Consensus 78 t~~df~~Lv~~aH~~Gi~VilD~V~NHts 106 (557)
T 1zja_A 78 TMEDFDRLMAELKKRGMRLMVDVVINHSS 106 (557)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSBCC
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEeccccc
Confidence 47889999999999999999999987654
No 415
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=20.24 E-value=1.8e+02 Score=23.47 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=31.4
Q ss_pred ChHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEE
Q 014769 169 DLDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVA 218 (419)
Q Consensus 169 ~~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~ 218 (419)
+.+.|+.++......+++. +|.+.. ++++++.+++++-.+++
T Consensus 18 ~~~~l~~al~s~~~~ifll-----~g~i~~---l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 18 NQKDMEKILELDLTYMVML-----ETHVAQ---LKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSHHHHHHTTSSCCEEEEC-----SEETTT---HHHHHHHHHHTTCEEEE
T ss_pred CHHHHHHHHcCCCCEEEEe-----cCcHHH---HHHHHHHHHHcCCeEEE
Confidence 6788999888777777775 344555 89999999999865544
No 416
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=20.21 E-value=2.3e+02 Score=24.43 Aligned_cols=54 Identities=9% Similarity=0.079 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCCCeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPGANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~gd~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+-...-|.|++..|.|..
T Consensus 53 ~~Er~~v~~~~~~~~~---gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y~~ 109 (291)
T 3a5f_A 53 ETERKETIKFVIDKVN---KRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYYNK 109 (291)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 3445555555443211 1123655443 4666665544433333999999998863
No 417
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=20.16 E-value=1.3e+02 Score=25.90 Aligned_cols=49 Identities=18% Similarity=0.222 Sum_probs=33.6
Q ss_pred hHHHHHhhcCCccEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEcccccc
Q 014769 170 LDAVEALADKNTAAMVIINPGNPCGNVFTYHHLQEIAEMARKLRVMVVADEVYGH 224 (419)
Q Consensus 170 ~~~l~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~ 224 (419)
.+.++++++.+.+.+++.+. | ++.++.+++.+.++++++.++-..+...
T Consensus 78 ~~~~~ea~~~Gi~~vVi~t~----G--~~~~~~~~l~~~a~~~gi~vigPNc~Gi 126 (288)
T 1oi7_A 78 ADAALEAAHAGIPLIVLITE----G--IPTLDMVRAVEEIKALGSRLIGGNCPGI 126 (288)
T ss_dssp HHHHHHHHHTTCSEEEECCS----C--CCHHHHHHHHHHHHHHTCEEEESSSCEE
T ss_pred HHHHHHHHHCCCCEEEEECC----C--CCHHHHHHHHHHHHHcCCEEEeCCCCeE
Confidence 45566666667775555432 3 3556788999999999998887665443
No 418
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=20.07 E-value=53 Score=23.16 Aligned_cols=21 Identities=19% Similarity=0.169 Sum_probs=18.2
Q ss_pred HHHHHHHHHhCCCeEEEcccc
Q 014769 202 LQEIAEMARKLRVMVVADEVY 222 (419)
Q Consensus 202 l~~i~~~~~~~~~~li~De~~ 222 (419)
-.+|.++++++|+.++.|..-
T Consensus 44 A~~I~~~A~e~gVPi~e~~~L 64 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVPL 64 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCeEEECHHH
Confidence 578999999999999999753
No 419
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=20.04 E-value=3.3e+02 Score=23.32 Aligned_cols=75 Identities=7% Similarity=0.041 Sum_probs=39.0
Q ss_pred CCCeEEeeCCCCCCcHHHHhhcCCEEEEEeccCCCCcccChHHHHH---hhcCCccEEEEeCCCCccccCCCHHHHHHHH
Q 014769 130 PGANVLLPRPGWPYYEGIAQRKQVEVRHFDLLPERNWEVDLDAVEA---LADKNTAAMVIINPGNPCGNVFTYHHLQEIA 206 (419)
Q Consensus 130 ~gd~vlv~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~ 206 (419)
++..+++..|.| ..+++.+|++...+.-. ..+..+....|.+ .++.+...+++..|+.+. +-+-
T Consensus 178 ~~~~~v~~H~af---~Yf~~~yGl~~~~~~~~-~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~---------~~~~ 244 (286)
T 3gi1_A 178 RSKTFVTQHTAF---SYLAKRFGLKQLGISGI-SPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP---------KIAH 244 (286)
T ss_dssp SCCEEEEEESCC---HHHHHHTTCEEEEEECS-CC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT---------HHHH
T ss_pred CCCEEEEECCch---HHHHHHCCCeEeecccc-CCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh---------HHHH
Confidence 567888877765 45678899987765421 1122345444443 444444444455554332 1222
Q ss_pred HHHHhCCCeEE
Q 014769 207 EMARKLRVMVV 217 (419)
Q Consensus 207 ~~~~~~~~~li 217 (419)
.++++.|+-++
T Consensus 245 ~la~~~g~~v~ 255 (286)
T 3gi1_A 245 AIAKSTGAKVK 255 (286)
T ss_dssp HHHHTTTCEEE
T ss_pred HHHHHhCCeEE
Confidence 34566676554
No 420
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=20.03 E-value=2e+02 Score=24.78 Aligned_cols=53 Identities=11% Similarity=0.060 Sum_probs=28.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCcEEEccc---HHHHHHHHHHHhcCCC-CeEEeeCCCCCC
Q 014769 87 PPARRAIADYLSRDLPYKLSADDVYVTLG---CKQAVEVILSVLARPG-ANVLLPRPGWPY 143 (419)
Q Consensus 87 ~~lr~~ia~~l~~~~~~~~~~~~i~~t~g---~~~al~~~~~~l~~~g-d~vlv~~p~~~~ 143 (419)
.+=|..+.+...+.-+ +.--|++..| +.+++..+-.+ .+-| |.|++..|.|..
T Consensus 53 ~~Er~~v~~~~~~~~~---gr~pviaGvg~~~t~~ai~la~~a-~~~Gadavlv~~P~y~~ 109 (292)
T 2ojp_A 53 HDEHADVVMMTLDLAD---GRIPVIAGTGANATAEAISLTQRF-NDSGIVGCLTVTPYYNR 109 (292)
T ss_dssp HHHHHHHHHHHHHHHT---TSSCEEEECCCSSHHHHHHHHHHT-TTSSCSEEEEECCCSSC
T ss_pred HHHHHHHHHHHHHHhC---CCCcEEEecCCccHHHHHHHHHHH-HhcCCCEEEECCCCCCC
Confidence 3445555555443211 1123665444 45555554443 3344 999999998863
No 421
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=20.02 E-value=2.8e+02 Score=23.36 Aligned_cols=33 Identities=15% Similarity=0.142 Sum_probs=22.6
Q ss_pred CCCcEEEcccHHHHHHHHHHHhcCCCCeEEeeC
Q 014769 106 SADDVYVTLGCKQAVEVILSVLARPGANVLLPR 138 (419)
Q Consensus 106 ~~~~i~~t~g~~~al~~~~~~l~~~gd~vlv~~ 138 (419)
....++||.++...=..+...|.+.|.+|++..
T Consensus 14 ~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~ 46 (280)
T 3pgx_A 14 QGRVAFITGAARGQGRSHAVRLAAEGADIIACD 46 (280)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEe
Confidence 344577776666655666777878898887753
Done!