BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014774
(419 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9SAC4|FB2_ARATH F-box protein At1g10780 OS=Arabidopsis thaliana GN=At1g10780 PE=2
SV=1
Length = 418
Score = 586 bits (1511), Expect = e-166, Method: Compositional matrix adjust.
Identities = 285/419 (68%), Positives = 345/419 (82%), Gaps = 1/419 (0%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60
MDSLPDAI+QYILS++ +ARDVA CNCVSKRWKES +KS+ F RNSF++ + D
Sbjct: 1 MDSLPDAILQYILSYLTSARDVAACNCVSKRWKESTDSVKSVVFHRNSFESIMETDDSDS 60
Query: 61 IVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGCLENPSKL 120
IV KMI S LEELVVY+PF+ +GL SW+M S+L+ LELRMDNLA + +E P KL
Sbjct: 61 IVRKMISSSRRLEELVVYSPFTSSGLASWMMHVSSSLRLLELRMDNLASEEVVVEGPLKL 120
Query: 121 DCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALRACPNLTNLL 180
DCI AKNLE LKLWGVLM+S PKWD+F L++LEIVGA+++D +LS ALRACPNL+NLL
Sbjct: 121 DCIGVAKNLEILKLWGVLMMSPPKWDMFPNLRSLEIVGAKMDDSSLSHALRACPNLSNLL 180
Query: 181 LLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRN 240
LL CEGV+S+SI+LP+LE CKLDFYG GN L ++ ++ L+VQGCSWIRV ET L+N
Sbjct: 181 LLACEGVKSISIDLPYLEHCKLDFYGQGNTLLVLTSQRLVSLDVQGCSWIRVPETKFLKN 240
Query: 241 LSISNNAGRVYMVDFGKLAALESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEFTGDFD 300
LSIS+ GRVYMVDF L++LE+L++RGVQWCWDAI +L A +VKHL+MKVEFTG+ +
Sbjct: 241 LSISSVTGRVYMVDFNNLSSLEALSIRGVQWCWDAICMILQQARDVKHLFMKVEFTGN-E 299
Query: 301 TLQPFPEVDFVEFFNNHPKLQKFDIHGAMFAALCQKNSLKNVESGFVIPCLEEVVVTVRS 360
LQPFPE+DFVEFFNNHPKLQ FDIHGAMFAALCQKNSLK +E+GF IPCLEEVV+TVRS
Sbjct: 300 ALQPFPEIDFVEFFNNHPKLQTFDIHGAMFAALCQKNSLKKLETGFTIPCLEEVVITVRS 359
Query: 361 PLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSSDDFFDEICRFRCMNRKIVRIE 419
PLNAEQKM+TLESL+KY + LK MVIRIL+MKS+HSS+DDF D+IC+FR MN +V IE
Sbjct: 360 PLNAEQKMNTLESLVKYARGLKRMVIRILRMKSNHSSADDFCDDICKFRHMNEHLVHIE 418
>sp|Q9ZW88|FBL34_ARATH F-box/LRR-repeat protein At1g67190 OS=Arabidopsis thaliana
GN=At1g67190 PE=2 SV=1
Length = 419
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 25/241 (10%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESI-PYLKSLYFPRNS--FDNQSCDNS 57
MD LP ++ ILS + ARDV + + ++W+E+ +L++L F F N
Sbjct: 1 MDYLPVEVIGNILSRLGGARDVVIASATCRKWREACRKHLQTLSFNSADWPFYRDLTTNR 60
Query: 58 PDDIVLKMIYSIVCLEELVVY----TPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGC 113
+ ++ + I+ + L+ L + FS A + +WLM TL+ L + +
Sbjct: 61 LEILITQTIFQTMGLQGLSIMMDDANKFSAATVIAWLMYTRDTLRRLSYNVRTTPNV-NI 119
Query: 114 LE--NPSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALR 171
LE KL+ + A N + GV P + F L++L + + L+ L
Sbjct: 120 LEICGRQKLEALVLAHN----SITGV----EPSFQRFPCLKSLSLSYVSISALDLNLLLS 171
Query: 172 ACPNLTNLLLLGCEGVRS---VSIEL--PHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQG 226
ACP + +L L+ E S V+IEL P L+ D G+ + I+FL ++
Sbjct: 172 ACPMIESLELVSLEIAMSDAQVTIELSSPTLKSVYFD--GISLDKFILEADSIEFLHMKD 229
Query: 227 C 227
C
Sbjct: 230 C 230
>sp|Q9LJF8|FBL47_ARATH F-box/LRR-repeat protein At3g26922 OS=Arabidopsis thaliana
GN=At3g26922 PE=2 SV=2
Length = 306
Score = 45.4 bits (106), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 109/236 (46%), Gaps = 18/236 (7%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60
+ LP+A++ ILS M +DV + +SK W+ + +L F +NQS D + +
Sbjct: 16 ISDLPEALLLQILS-MLPVKDVVTTSVLSKPWRSLWKLVPTLKFDYE--NNQSEDETYSE 72
Query: 61 IVLKMIYS--IVCLEELVVYTPFSK---AGLDSWLMLAGSTLKHLELRMDNLADYQGCLE 115
IV +++ S LE L + F + + W+ +A + +H+ + ++ +G
Sbjct: 73 IVCRLLLSNKAPFLESLHLGFRFGECRSVEVGMWIGIAYA--RHVRDLVLHVESVKGSFI 130
Query: 116 NPSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLE-DPALSTALRACP 174
P+ L + LESL L ++V P L+ L + + D ++ L CP
Sbjct: 131 FPTGL---YNCETLESLTLRSWVLVDVPSPACLKSLRTLRLENVDYKYDDSVYNLLSGCP 187
Query: 175 NLTNLLLLGCE--GVRSVSIELPHLEQCKL--DFYGLGNCSLSVSCPKIQFLEVQG 226
NL NL++ V + +I +P L++ + D G ++ P +++L++ G
Sbjct: 188 NLENLVVYRGNLLEVETFTIAVPSLQRLTIYDDNDGEYCTGYVINAPSLKYLKIDG 243
>sp|Q84W80|FBL42_ARATH F-box/LRR-repeat protein At3g03360 OS=Arabidopsis thaliana
GN=At3g03360 PE=2 SV=2
Length = 481
Score = 40.0 bits (92), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 83/191 (43%), Gaps = 12/191 (6%)
Query: 4 LPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDDIVL 63
LPD I+Q ILS++ R + +S+RW+ SL F R+ D + D
Sbjct: 42 LPDDILQLILSYLP-TRLAIKTSVLSRRWRHVWSDTWSLSFHRDRPDAPCINRILDRYRA 100
Query: 64 KMIYSI---VCLEELVVYTPFSKAGLDSWLMLAGS-TLKHLELRMDNLADYQGCLENPSK 119
+ S C + P + A +DSW+ A S +++L L +D + + P
Sbjct: 101 PKMMSFRICSCCRAACISRPDTHADIDSWINFAMSRNVENLSLYLD-----EDKYDIPEF 155
Query: 120 LDCISRAKNLE-SLKLWGVLMVSSPKWDV-FHKLQNLEIVGARLEDPALSTALRACPNLT 177
L S K L + +PK V + L+NL + + D +++ L CP L
Sbjct: 156 LYINSSLKQLYLDFGCKKDFISLNPKCSVSWTSLKNLSLYHCNISDESIAIILSGCPILE 215
Query: 178 NLLLLGCEGVR 188
+LLL C+ ++
Sbjct: 216 SLLLFFCKKLK 226
>sp|Q9FJV2|FBD27_ARATH Putative FBD-associated F-box protein At5g56560 OS=Arabidopsis
thaliana GN=At5g56560 PE=4 SV=2
Length = 418
Score = 39.3 bits (90), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 22/209 (10%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60
+ LPD ++ ILS + + +S+RWK + P +FD+ +
Sbjct: 7 LSDLPDELLLKILSALPMFKVTLATRLISRRWKGPWKLV-----PDVTFDDDDIPFKSFE 61
Query: 61 IVLKMIYS--------IVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQG 112
+ +Y I+ L + +S + ++ W+ +A + ELR+D +
Sbjct: 62 TFMSFVYGSFLSNDAQILDRLHLKLNQKYSASDINFWVQVAVNRSVR-ELRIDL---FGK 117
Query: 113 CLENPSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARL-EDPALSTALR 171
LE P C+ L+ L L + + P W L+ L ++ + D +++ LR
Sbjct: 118 TLELPC---CLCSCITLKELTLHDLCIKVVPAWFRLPSLKTLHLLSVKFSSDGFVASILR 174
Query: 172 ACPNLTNLLLLGCEG-VRSVSIELPHLEQ 199
CP L L++ G +G V +I++P L
Sbjct: 175 ICPVLERLVVDGTKGNVMITNIDVPTLRN 203
>sp|Q9SMY8|FBL15_ARATH F-box/LRR-repeat protein 15 OS=Arabidopsis thaliana GN=FBL15 PE=1
SV=2
Length = 990
Score = 38.5 bits (88), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 60/139 (43%), Gaps = 19/139 (13%)
Query: 159 ARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIE----LPHLEQCKLDFYGLGNCS-LS 213
++L D LS +CP + +L+L+ C + S + LP+L L + L N +
Sbjct: 695 SQLRDDCLSATTASCPLIESLVLMSCPSIGSDGLSSLNGLPNLTVLDLSYTFLMNLEPVF 754
Query: 214 VSCPKIQFLEVQGCSWIRVQETNCLRNLSISNNAGRVYMVDFGKLAALESLTLRGVQWCW 273
SC +++ L++Q C ++ ++ + G L ALE L L C
Sbjct: 755 KSCIQLKVLKLQACKYL--------------TDSSLEPLYKEGALPALEELDLSYGTLCQ 800
Query: 274 DAISKMLYWASEVKHLYMK 292
AI +L + + HL +
Sbjct: 801 TAIDDLLACCTHLTHLSLN 819
Score = 32.0 bits (71), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 41/81 (50%), Gaps = 11/81 (13%)
Query: 168 TALRAC-PNLTNLLLLGCEGVRSVSIELPHLEQCKLD---------FYGLGNCSLSVS-C 216
TA+R C +L +L L+GC V S+ ++ P +EQ LD F + SL++ C
Sbjct: 593 TAVRFCNSSLASLSLVGCRAVTSLELKCPRIEQICLDGCDHLETAFFQPVALRSLNLGIC 652
Query: 217 PKIQFLEVQGCSWIRVQETNC 237
PK+ L ++ + ++ C
Sbjct: 653 PKLSVLNIEAPYMVSLELKGC 673
>sp|Q9C5D2|FBL4_ARATH F-box/LRR-repeat protein 4 OS=Arabidopsis thaliana GN=FBL4 PE=2
SV=1
Length = 610
Score = 38.5 bits (88), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 40/224 (17%)
Query: 126 AKNLESLKLWGVLMVSSPKWDVF----HKLQNLEIVGAR-LEDPALSTALRACPNLTNLL 180
+K L+ L L VS + +L+ +EI G + + ++CP L L
Sbjct: 319 SKKLKDLTLSDCYFVSCKGLEAIAHGCKELERVEINGCHNIGTRGIEAIGKSCPRLKELA 378
Query: 181 LLGCE----------GVRSVSIELPHLEQCKLDFYGLGN---CSLSVSCPKIQFLEVQGC 227
LL C+ G S+E+ HL +D G+G+ CS++ C ++ L ++ C
Sbjct: 379 LLYCQRIGNSALQEIGKGCKSLEILHL----VDCSGIGDIAMCSIAKGCRNLKKLHIRRC 434
Query: 228 SWIR-------VQETNCLRNLSIS--NNAGRVYMVDFGKLAALESLTLRGVQWCWDA-IS 277
I + L LS+ + G ++ GK +L+ L + G DA I+
Sbjct: 435 YEIGNKGIISIGKHCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGIT 494
Query: 278 KMLYWASEVKHLYMKVEFTGDFDTLQPFPEVDFVEFFNNHPKLQ 321
+ ++ HL D LQ ++ E P L+
Sbjct: 495 AIARGCPQLTHL--------DISVLQNIGDMPLAELGEGCPMLK 530
>sp|Q8YA32|INLI_LISMO Internalin-I OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlI PE=4 SV=1
Length = 1778
Score = 37.7 bits (86), Expect = 0.19, Method: Composition-based stats.
Identities = 63/261 (24%), Positives = 104/261 (39%), Gaps = 30/261 (11%)
Query: 101 ELRMDNLADYQGCLENPSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLE-IVGA 159
EL M L+ GC SKL I+ KNL +L + + L L+ +V +
Sbjct: 345 ELEMIQLS---GC----SKLKEITSLKNLPNLVNITADSCAIEDLGTLNNLPKLQTLVLS 397
Query: 160 RLEDPALSTALRACPNLTNLLLLGCEGVRSVSI--ELPHLEQCKLDFYGLGNCSLSVSCP 217
E+ TA+ P L L L GC G+ S+ LP LE+ L + + S P
Sbjct: 398 DNENLTNITAITDLPQLKTLTLDGC-GITSIGTLDNLPKLEKLDLKENQITSISEITDLP 456
Query: 218 KIQFLEVQGCSWIRV---QETNCLRNLSISNNAGRVYMVDFGKLAALESLTLRGV-QWCW 273
++ +L+V + + ++ L L++S+N + D L SL +
Sbjct: 457 RLSYLDVSVNNLTTIGDLKKLPLLEWLNVSSNR----LSDVSTLTNFPSLNYINISNNVI 512
Query: 274 DAISKMLYWASEVKHLYMKVEFTGDFDTLQPFPEVDFVE----------FFNNHPKLQKF 323
+ KM S +K Y + D + P + V+ F+N PKLQ
Sbjct: 513 RTVGKMTELPS-LKEFYAQNNSISDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQSL 571
Query: 324 DIHGAMFAALCQKNSLKNVES 344
D+H + + L ++E+
Sbjct: 572 DVHSNRITSTSVIHDLPSLET 592
>sp|Q9T0F1|FB226_ARATH F-box protein At4g09920 OS=Arabidopsis thaliana GN=At4g09920 PE=4
SV=2
Length = 316
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 95/217 (43%), Gaps = 16/217 (7%)
Query: 4 LPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSP----D 59
LPD ++ ILS + V+ + +SKRW+ +L L F +
Sbjct: 7 LPDEVLVKILSFVPTKVAVS-TSILSKRWEFLWMWLTKLKFGSKRYSESEFKRLQCFLDR 65
Query: 60 DIVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGST-LKHLELRMDNLADYQGCLENPS 118
++ L I ++ + F + W+++A S ++ L++ + + Q L PS
Sbjct: 66 NLPLHRAPVIESFRLVLSDSHFKPEDIRMWVVVAVSRYIRELKIYSSHYGEKQNIL--PS 123
Query: 119 KLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGAR-LEDPALSTALRACPNLT 177
L K+L LKL G +++ P+ L+ LE+ G R + +L L CP L
Sbjct: 124 SL---YTCKSLVILKLDGGVLLDVPRMVCLPSLKTLELKGVRYFKQGSLQRLLCNCPVLE 180
Query: 178 NL--LLLGCEGVRSVSIELPHLEQCKLDFYGLGNCSL 212
+L LLL C+ + + +P L+ +L Y C+L
Sbjct: 181 DLFVLLLRCDDIGMFIVIVPSLQ--RLSLYLSPRCNL 215
>sp|P38285|AMN1_YEAST Antagonist of mitotic exit network protein 1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=AMN1 PE=1
SV=1
Length = 549
Score = 37.0 bits (84), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 58/113 (51%), Gaps = 12/113 (10%)
Query: 111 QGCLENPSKLDCISRAKNLESLKLWGVLMVSSP-KW-DVFHKLQNLEIVGAR-LEDPALS 167
Q +E S+++C +NL+ L+ + ++ P W D HKL+ L I G + ++D L
Sbjct: 300 QPDIERLSRMEC----QNLKWLEFYVCPRITPPLSWFDNLHKLEKLIIPGNKNIDDNFLL 355
Query: 168 TALRACPNLTNLLLLGCE-----GVRSVSIELPHLEQCKLDFYGLGNCSLSVS 215
++ PNL +L+L C+ GV +++ P L+ + + GN SVS
Sbjct: 356 RLSQSIPNLKHLVLRACDNVSDSGVVCIALNCPKLKTFNIGRHRRGNLITSVS 408
>sp|Q0P5G1|TONSL_BOVIN Tonsoku-like protein OS=Bos taurus GN=TONSL PE=2 SV=1
Length = 1374
Score = 37.0 bits (84), Expect = 0.28, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 54/129 (41%), Gaps = 32/129 (24%)
Query: 151 LQNLEIVGARLED---PALSTALRACPNLTNLLL----LGCEGVRSVS------IELPHL 197
L+ L + G RL D L L P LT L L LG EG+R ++ L +L
Sbjct: 1068 LRELRLAGNRLGDGCVAELLATLDTVPGLTLLDLSSNHLGPEGLRQLAAGLLGQTTLQNL 1127
Query: 198 EQCKLDFYGLGN------CSLSVSCPKIQFLEVQGCSW-------------IRVQETNCL 238
E+ L LG+ S+ +CP + L +Q C + Q+T CL
Sbjct: 1128 EELDLSMNPLGDGCGQALASILRACPVLCTLHLQACGFGPGFFLSHQVALGSAFQDTKCL 1187
Query: 239 RNLSISNNA 247
+ LS+S N
Sbjct: 1188 KTLSLSYNG 1196
>sp|Q13309|SKP2_HUMAN S-phase kinase-associated protein 2 OS=Homo sapiens GN=SKP2 PE=1
SV=2
Length = 424
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 91/217 (41%), Gaps = 41/217 (18%)
Query: 5 PDA--IVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDDIV 62
PD+ I Q +LS++ + SK + ++ R +F S D+ PD+++
Sbjct: 46 PDSENIPQELLSNLGHPESPPRKRLKSKGSDKDFVIVRRPKLNRENFPGVSWDSLPDELL 105
Query: 63 LKMIYSIVCLEELVVYTPFSKAGLDSWLMLAG--STLKHLELRMDNLAD-------YQGC 113
L I+S +CL EL+ + K W LA S + L+L NL QG
Sbjct: 106 LG-IFSCLCLPELLKVSGVCKR----WYRLASDESLWQTLDLTGKNLHPDVTGRLLSQGV 160
Query: 114 LE----------------NPSKLDCISRAKN-LESLKLWGVLMVSSPKWDVFHKLQNLEI 156
+ +P ++ + + + +E L G+L S KLQNL +
Sbjct: 161 IAFRCPRSFMDQPLAEHFSPFRVQHMDLSNSVIEVSTLHGILSQCS-------KLQNLSL 213
Query: 157 VGARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIE 193
G RL DP ++T L NL L L GC G +++
Sbjct: 214 EGLRLSDPIVNT-LAKNSNLVRLNLSGCSGFSEFALQ 249
>sp|Q3EC97|FBL14_ARATH F-box/LRR-repeat protein 14 OS=Arabidopsis thaliana GN=FBL14 PE=2
SV=1
Length = 480
Score = 36.2 bits (82), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 56/136 (41%), Gaps = 32/136 (23%)
Query: 148 FHKLQNLEIV--------GARLEDPALSTALRACPNLTNLLLLGCEGVRSVSI----ELP 195
F L +EI+ G +++D L C +LT+L L C + V I P
Sbjct: 76 FPNLSKVEIIYSGWMSKLGKQVDDQGLLVLTTNCHSLTDLTLSFCTFITDVGIGHLSSCP 135
Query: 196 HLEQCKLDF----YGLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRNLSISNNAGRVY 251
L KL+F G G SL+V C K++ R+ CL N A +
Sbjct: 136 ELSSLKLNFAPRITGCGVLSLAVGCKKLR----------RLHLIRCL------NVASVEW 179
Query: 252 MVDFGKLAALESLTLR 267
+ FGKL LE L ++
Sbjct: 180 LEYFGKLETLEELCIK 195
>sp|Q9MAP1|FB33_ARATH Putative F-box protein At1g33020 OS=Arabidopsis thaliana
GN=At1g33020 PE=4 SV=2
Length = 548
Score = 36.2 bits (82), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESI--PYLKSLYFPRNS 48
+DS+P ++ I S M + + + C CVSK WK + PY L+ R+S
Sbjct: 7 LDSIPTDLILEIFSRM-STKSIGRCRCVSKLWKSMLGHPYFTELFLTRSS 55
>sp|Q9FJT2|FDL40_ARATH Putative F-box/FBD/LRR-repeat protein At5g56810 OS=Arabidopsis
thaliana GN=At5g56810 PE=4 SV=1
Length = 435
Score = 36.2 bits (82), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 97/242 (40%), Gaps = 30/242 (12%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDN-------QS 53
+ LP+ ++ ILS + D + +SKRWK L +L + NS N Q
Sbjct: 17 ISQLPNDLLFRILSLIP-VSDAMSTSLLSKRWKSVWKMLPTLVYNENSCSNIGSLGFDQF 75
Query: 54 CDNSPDDIVLKMIYSIVCLEELVVYTPFSKAGLDSWLML-AGSTLKHLELRMDNLADYQG 112
C S ++ L+ L + LDS + STL ++ Y
Sbjct: 76 CGRS------LQLHEAPLLKTLTLELRKQTDSLDSSIFPNIHSTLLEFSIKSTGYPVYYS 129
Query: 113 CLENPSKLDCISRAKNLESLKLWGVL---MVSSPKWDVFHKLQNLEIVGARLE-DPALST 168
+ P+ LD + L LKL G + +V SP F L++L + E + + S
Sbjct: 130 TISFPNNLDVF---QTLVVLKLQGNICLDVVDSPV--CFQSLKSLYLTCVNFENEESFSK 184
Query: 169 ALRACPNLTNLLL--LGCEGVRSVSIELPHLEQCKLD----FYGLGNCSLSVSCPKIQFL 222
L ACP L +L L L G SI +P L++ +Y L ++ P ++ L
Sbjct: 185 LLSACPVLEDLFLQRLCSVGRFLFSISVPSLQRLTYTKEQAYYSNDEAILEITAPSLKHL 244
Query: 223 EV 224
+
Sbjct: 245 NI 246
>sp|Q9BY66|KDM5D_HUMAN Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2
Length = 1539
Score = 35.4 bits (80), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 14/112 (12%)
Query: 302 LQPFPEVDFVEFFNNHPKLQKFDIHGA----MFAALCQKNSLKNVESGFVIPCLEEVVVT 357
LQP PE E HP+L+K I+G M L K+ K V P VT
Sbjct: 216 LQPDPE-PTEEDIEKHPELKKLQIYGPGPKMMGLGLMAKDKDKTVHKKVTCP----PTVT 270
Query: 358 VRSPLNAEQKMSTLESLLKYGKNLKTMVIRILQMKSSHSSS---DDFFDEIC 406
V+ + +S+ +LLK +L+ +Q++ +HSS+ D + ++C
Sbjct: 271 VKDEQSGGGNVSS--TLLKQHLSLEPCTKTTMQLRKNHSSAQFIDSYICQVC 320
>sp|A6QLE5|NALP3_BOVIN NACHT, LRR and PYD domains-containing protein 3 OS=Bos taurus
GN=NLRP3 PE=2 SV=1
Length = 1031
Score = 35.4 bits (80), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 37/73 (50%), Gaps = 8/73 (10%)
Query: 151 LQNLEIVGARLED---PALSTALRACPNLTNLLL----LGCEGVRSVSIELPHLEQCKLD 203
LQ L +V + L PALS+ L NLT+L L LG GV+ + L H CKL
Sbjct: 881 LQKLGLVNSGLTSGCCPALSSVLSTNQNLTHLYLQGNALGDMGVKLLCEGLLH-RNCKLQ 939
Query: 204 FYGLGNCSLSVSC 216
L NCSL+ C
Sbjct: 940 VLELDNCSLTSHC 952
>sp|Q9LV26|FBL45_ARATH Putative F-box/LRR-repeat protein At3g18150 OS=Arabidopsis thaliana
GN=At3g18150 PE=4 SV=2
Length = 456
Score = 35.0 bits (79), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 143/362 (39%), Gaps = 56/362 (15%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60
+ SLPD I+Q+ILS + + + +SKRW+ SL F + D +
Sbjct: 33 ISSLPDVILQHILSFIPTKLAIT-TSLLSKRWRHVWCDTPSLSFNDYRLEAPFIDETLTR 91
Query: 61 IVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGS-TLKHLELRMDNLADYQGCLENPSK 119
+ L+ P L+SW+ A S + HL L + N + P
Sbjct: 92 YTASKMMRFHLHTSLINNVP----HLESWIKFAMSRNVDHLSLDLWN--QVANKFKFPDF 145
Query: 120 LDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTALRACPNLTNL 179
S K L + + M++ L+ L + L D +++ L CP L +L
Sbjct: 146 FHINSSLKQLTVVLDFSDTMIAIC-------LKKLYLSTCLLSDESMANILFGCPILESL 198
Query: 180 LLLGCEGVR----SVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGCSWIRVQET 235
L C G+R S S+ L LE NC++ V P++ +++ T
Sbjct: 199 TLDHCGGLRVLDLSKSLRLRTLEI---------NCNIWV--PELTAMQIVA------PHT 241
Query: 236 NCLRNLSISNNAGRVYMVDFGKLAALESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEF 295
+CLR + N+ +VD + SL + C D+ SK +K +++V
Sbjct: 242 HCLR---LRNSKLPCSLVD------VSSLKEAKLNICIDSFSK------TIKADFLQVTL 286
Query: 296 TGDFDTLQPFPEVDFVEFFNNHPK-LQKFDIHGAMFAALCQKN-SLKNVESGFVIPCLEE 353
L+ V+ + N + L ++ G F K+ +L+ V +VIP +E
Sbjct: 287 ---LKMLEKLHNVEKLTLGGNFLQILSVAELRGVPFPMFKVKDLTLETVIFQYVIPGIER 343
Query: 354 VV 355
V+
Sbjct: 344 VL 345
>sp|Q9LXR4|FBL56_ARATH Putative F-box/LRR-repeat protein At3g58880 OS=Arabidopsis
thaliana GN=At3g58880 PE=4 SV=1
Length = 454
Score = 35.0 bits (79), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDN 51
+ SLPD ++ +ILS + ++ AL + +SKRW+ I ++ L F ++F N
Sbjct: 5 VSSLPDDLLGHILS-LLTTKEAALTSILSKRWRYLIAFVPYLEFDDSAFLN 54
>sp|Q9FM89|FDL38_ARATH F-box/FBD/LRR-repeat protein At5g56420 OS=Arabidopsis thaliana
GN=At5g56420 PE=2 SV=1
Length = 422
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 59/246 (23%), Positives = 115/246 (46%), Gaps = 37/246 (15%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNS-PD 59
+ LPD + ILS + +DV + + +SKRW+ +L +L PR ++D + DN+ P
Sbjct: 8 LSQLPDDFLLQILSWLPT-KDVLVTSLLSKRWR----FLWTL-VPRLNYDLRLHDNTCPR 61
Query: 60 -----DIVLKMIYSIVCLEEL------VVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLA 108
D L +++ LE L + +T G+ W+ + +R +++
Sbjct: 62 FSQFVDRSL-LLHKAPTLESLNIKIGSICFTAEKDVGV--WVRIGVDRF----VRELSVS 114
Query: 109 DYQGCLENPSKL-DCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGAR-LEDPAL 166
G E P +L C+ L LKL + + + + F L+ L ++ + L+D +L
Sbjct: 115 YCSG--EEPIRLPKCLFTCSTLAVLKLENITLEDASCYVCFQSLKTLHLLDVKYLDDQSL 172
Query: 167 STALRACPNLTNLLLLGCEG--VRSVSIELPHLEQCKLD-----FYGLGNCSLSVSCPKI 219
+ +C +L +L++ C G V+ V++ P L+ L F G + L + PK+
Sbjct: 173 PRIISSCSSLEDLVVQRCPGDNVKVVTVTAPSLKTLSLHKSSQAFEGDDDGFL-IDTPKL 231
Query: 220 QFLEVQ 225
+ ++++
Sbjct: 232 KRVDIE 237
>sp|Q6DR13|FBL38_ARATH F-box/LRR-repeat protein At2g42720 OS=Arabidopsis thaliana
GN=At2g42720 PE=2 SV=1
Length = 443
Score = 34.7 bits (78), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYF 44
+ SLPD I+++ILS + + ++ AL + +S RWK ++ SL+
Sbjct: 4 ISSLPDEILEHILSFL-STKEAALTSSLSTRWKNVFVFVPSLHL 46
>sp|Q6L439|R1A4_SOLDE Putative late blight resistance protein homolog R1A-4 OS=Solanum
demissum GN=R1A-4 PE=5 SV=2
Length = 1244
Score = 34.7 bits (78), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 57/119 (47%), Gaps = 31/119 (26%)
Query: 127 KNLESLKLWGVLMVSSPKWDVFHKL-QNLEIVGARLEDPALS---TALRACPNLTNLLLL 182
KNLE LKL+ V +W V + + L+I+ +LED +L A A PNL L+L
Sbjct: 1128 KNLEVLKLYYVEFGDHREWKVSNGMFPQLKIL--KLEDVSLMKWIVADDAFPNLEQLVLR 1185
Query: 183 GCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGC------SWIRVQET 235
GC+ + +E+P C +D L Q++EV+ C S + +QET
Sbjct: 1186 GCQDL----MEIP---SCFMDILSL------------QYIEVEDCNESVVKSAMNIQET 1225
>sp|Q6L438|R1A6_SOLDE Putative late blight resistance protein homolog R1A-6 OS=Solanum
demissum GN=R1A-6 PE=3 SV=2
Length = 1306
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 31/120 (25%)
Query: 127 KNLESLKLWGVLMVSSPKWDVFHKL-QNLEIVGARLEDPALS---TALRACPNLTNLLLL 182
KNLE LKL+ V +W V + + L+I+ +LED +L A A PNL L+L
Sbjct: 1131 KNLEVLKLYYVEFGDHREWKVSNGMFPQLKIL--KLEDVSLMKWIVADDAFPNLEQLVLR 1188
Query: 183 GCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGC------SWIRVQETN 236
GC+ + +E+P C +D L Q++EV+ C S + +QET
Sbjct: 1189 GCQDL----MEIP---SCFMDILSL------------QYIEVEDCNESVVKSAMNIQETQ 1229
>sp|Q60CZ8|R1A10_SOLDE Putative late blight resistance protein homolog R1A-10 OS=Solanum
demissum GN=R1A-10 PE=3 SV=1
Length = 1306
Score = 34.7 bits (78), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 31/120 (25%)
Query: 127 KNLESLKLWGVLMVSSPKWDVFHKL-QNLEIVGARLEDPALS---TALRACPNLTNLLLL 182
KNLE LKL+ V +W V + + L+I+ +LED +L A A PNL L+L
Sbjct: 1131 KNLEVLKLYYVEFGDHREWKVSNGMFPQLKIL--KLEDVSLMKWIVADDAFPNLEQLVLR 1188
Query: 183 GCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQGC------SWIRVQETN 236
GC+ + +E+P C +D L Q++EV+ C S + +QET
Sbjct: 1189 GCQDL----MEIP---SCFMDILSL------------QYIEVEDCNESVVKSAMNIQETQ 1229
>sp|Q2V3N5|FB211_ARATH F-box protein At3g59000 OS=Arabidopsis thaliana GN=At3g59000 PE=1
SV=2
Length = 491
Score = 34.3 bits (77), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 28/42 (66%), Gaps = 1/42 (2%)
Query: 3 SLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYF 44
SLPD ++ +ILS + ++ AL + +SKRW+ I ++ +L F
Sbjct: 6 SLPDELLSHILSFL-TTKEAALTSLLSKRWRYLIAFVPNLAF 46
>sp|Q723X5|INLI_LISMF Internalin-I OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlI PE=3 SV=1
Length = 1775
Score = 34.3 bits (77), Expect = 2.0, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 67/174 (38%), Gaps = 22/174 (12%)
Query: 169 ALRACPNLTNLLLLGCEGVRSVSI--ELPHLEQCKLDFYGLGNCSLSVSCPKIQFLEVQG 226
A+ P L L L GC G+ S+ LP LE+ L L + S P++ +L+V
Sbjct: 404 AITDMPQLKTLALDGC-GITSIGTLDNLPKLEKLDLKENQLTSISEINDLPRLSYLDVSV 462
Query: 227 CSWIRVQETN---CLRNLSISNNAGRVYMVDFGKLAALESLTLRGV-QWCWDAISKMLYW 282
+ E L L++S+N + D L SL V + KM
Sbjct: 463 NYLTTIGELKKLPLLEWLNVSSNR----LSDVSTLTNFPSLNYINVSNNVIRTVGKMTEL 518
Query: 283 ASEVKHLYMKVEFTGDFDTLQPFPEVDFVE----------FFNNHPKLQKFDIH 326
S +K Y + D + P + V+ F+N PKLQ D+H
Sbjct: 519 PS-LKEFYAQNNNVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVH 571
Score = 33.1 bits (74), Expect = 3.9, Method: Composition-based stats.
Identities = 44/174 (25%), Positives = 72/174 (41%), Gaps = 22/174 (12%)
Query: 104 MDNLADYQGCLENPSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLED 163
+ +L ++ N S + I NL + L+ + +D KLQNL++ R+ +
Sbjct: 518 LPSLKEFYAQNNNVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQNLDVHSNRITN 577
Query: 164 -------PALSTALRACPNLTNLLLLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSC 216
P+L T +TN+ + LP L L F + + +
Sbjct: 578 TSVIHDLPSLETFYAQNNLITNIGTMD---------NLPELTYVDLSFNRIPSLAPIGDL 628
Query: 217 PKIQFLEV-QGCSWIRVQET----NCLRNLSISNNAGRVYMVDFGKLAALESLT 265
PK++ L+V S++R T + LRNL + NN Y G L+AL LT
Sbjct: 629 PKLEILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYLN-YTGTEGNLSALSDLT 681
>sp|Q6CVS2|AMN1_KLULA Antagonist of mitotic exit network protein 1 OS=Kluyveromyces
lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
1267 / NRRL Y-1140 / WM37) GN=AMN1 PE=3 SV=1
Length = 424
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 52/143 (36%), Gaps = 36/143 (25%)
Query: 147 VFHKLQNLEIVG-ARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIELPHLEQCKLDFY 205
+ + L L I G ++ D L + + PNL +L L C + +SI
Sbjct: 215 ISNNLTKLTIAGNKKINDEELISLILGLPNLIDLDLRACSQISDISI------------- 261
Query: 206 GLGNCSLSVSCPKIQFLEVQGCSWIRVQETNCLRNLSISNNAGRVYMVDFGKLAALESLT 265
S+ CPK+Q + NL N+ + + L+ LE LT
Sbjct: 262 ----VSIVTHCPKLQSI-----------------NLGRHENSHLITDLSIMALSELEHLT 300
Query: 266 LRGVQWCWDAISKMLYWASEVKH 288
G C D IS + W KH
Sbjct: 301 TVGFSGC-DKISDVSIWQLYSKH 322
>sp|O49508|FB237_ARATH F-box protein At4g18380 OS=Arabidopsis thaliana GN=At4g18380 PE=2
SV=1
Length = 380
Score = 33.9 bits (76), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 29/42 (69%)
Query: 2 DSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLY 43
D+LPD+I+ I +++ + + + C+ VSKR+ IP +++++
Sbjct: 26 DNLPDSILLLIFNNIGDVKALGRCSVVSKRFHSLIPQVENVF 67
>sp|A1A5X2|FBXL7_DANRE F-box/LRR-repeat protein 7 OS=Danio rerio GN=fbxl7 PE=2 SV=1
Length = 489
Score = 33.5 bits (75), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 71/295 (24%), Positives = 110/295 (37%), Gaps = 84/295 (28%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNC--VSKRWKESI--PYL--------KSLYFPR-- 46
+D LPD I +H+ + LC C V +RW P L L+ R
Sbjct: 112 VDILPDHAFLQIFTHLPTNQ---LCRCARVCRRWYNLAWDPRLWRTIRLTGDVLHVDRAL 168
Query: 47 NSFDNQSCDNSPDDIVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDN 106
+ C ++P+ VCL V + D L + ELR
Sbjct: 169 RVLTRRLCQDTPN----------VCLTVETVMVSGCRRLTDRGLYTVAQSCP--ELRRLE 216
Query: 107 LADYQGC--LENPSKLDCISRAKNLESLKLWGVLMVS--SPKWDVFHKLQNL--EIVGAR 160
+A GC + N + + +SR NLE L + G V+ S DV KL L + + R
Sbjct: 217 VA---GCYNVSNEAVFEVVSRCPNLEHLDVSGCSKVTCISLTRDVSVKLSPLHGQQISIR 273
Query: 161 ---------LEDPALSTALRACPNLTNL---------------LLLGCEGVRSVSI---- 192
LED L T C LT+L L++ C GVR +S+
Sbjct: 274 FLDMTDCFALEDEGLHTIAAHCTQLTHLYLRRCVRLTDEGLRFLVIYCPGVRELSVSDCR 333
Query: 193 --------ELPHLEQCKLDFYGLGNCS---------LSVSCPKIQFLEVQGCSWI 230
E+ LE +L + + +CS ++ C ++++L +GC +
Sbjct: 334 FISDFGLREIAKLEG-RLRYLSIAHCSRITDVGVRYVAKYCSRLRYLNARGCEGL 387
>sp|Q10432|CCQ1_SCHPO Coiled-coil quantitatively-enriched protein 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ccq1 PE=1 SV=1
Length = 735
Score = 33.5 bits (75), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 164 PALSTALRACPNLTNLLLLGCEGVRSVSIELPHLEQCKLDFYGLGNCSLSVSC 216
P+ S L++CP+L+ + E SV+ LP ++ L LG+ ++ C
Sbjct: 293 PSASHFLQSCPDLSATIFYDIEAYMSVTSSLPSIQSLVLRLIHLGSIEHAIKC 345
>sp|Q8NEE6|FXL13_HUMAN F-box/LRR-repeat protein 13 OS=Homo sapiens GN=FBXL13 PE=2 SV=3
Length = 735
Score = 33.5 bits (75), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 150 KLQNLEIVG-ARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIE-LPHLEQCKLDFYGL 207
KL+ + G R+ D + + PNL+++ + C+G+ S+ L L+Q L L
Sbjct: 401 KLRKIRFEGNKRVTDASFKFIDKNYPNLSHIYMADCKGITDSSLRSLSPLKQ--LTVLNL 458
Query: 208 GNCSLSVSCPKIQFLEVQGCSWIRVQE---TNCLR--NLSISNNAGRVYMVDFGKLAALE 262
NC QFL+ G + +R++E +NC+R + S+ + R +++ L E
Sbjct: 459 ANCVRIGDMGLKQFLD--GPASMRIRELNLSNCVRLSDASVMKLSERCPNLNYLSLRNCE 516
Query: 263 SLTLRGVQW 271
LT +G+ +
Sbjct: 517 HLTAQGIGY 525
>sp|Q9FM91|FBD23_ARATH Putative FBD-associated F-box protein At5g56400 OS=Arabidopsis
thaliana GN=At5g56400 PE=4 SV=2
Length = 455
Score = 33.1 bits (74), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 50/236 (21%), Positives = 107/236 (45%), Gaps = 17/236 (7%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDN---- 56
+ LP+ ++ +ILS + D+ + VSKRW+ + L F +D + D+
Sbjct: 35 ISDLPEDLLVHILSLLPTTNDIVATSGVSKRWESLWTKVHKLRFNDRIYDGKRYDSFLHF 94
Query: 57 SPDDIVLKMIYSIVCLEELVVYTPFSKAGLDSWLMLAGSTLKHLELRMDNLADYQGCLEN 116
++L ++V L L V + + W+ LA EL + + D+ G +
Sbjct: 95 VEKSLILHKAPTLVSL-RLSVGPKCTADDIGLWIKLALDR-NICELIIKHYPDH-GHIRL 151
Query: 117 PSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLE-DPALSTALRACPN 175
+L +K L SLKL ++ + F L+ L + + D ++ T + +CP+
Sbjct: 152 SRRL---CDSKTLVSLKLKNAILGAIWLPTCFISLKTLHLRYVKYSGDESVRTLISSCPS 208
Query: 176 LTNLLL--LGCEGVRSVSIELPHLEQCKL---DFYGLGNC-SLSVSCPKIQFLEVQ 225
L NL++ + V+ +I + +L+ + +G+ + + ++ P +++L ++
Sbjct: 209 LRNLVVKRHNEDNVKRFAIIVRYLQSLTVYLSPLHGVADSDAYVINTPNLKYLNIK 264
>sp|D4A615|TONSL_RAT Tonsoku-like protein OS=Rattus norvegicus GN=Tonsl PE=3 SV=1
Length = 1367
Score = 33.1 bits (74), Expect = 3.9, Method: Composition-based stats.
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 19/98 (19%)
Query: 151 LQNLEIVGARLEDPALSTALRACPNLTNLLL-------LGCEGVRSV------SIELPHL 197
L+ L + G RL DP + L + NL+L LG EG+R + ++
Sbjct: 1065 LRELRLSGNRLGDPCATELLATLGTMPNLVLLDLSSNHLGPEGLRQLVEGSLGQTAFQNV 1124
Query: 198 EQCKLDFYGLGN------CSLSVSCPKIQFLEVQGCSW 229
E+ L LG+ SL +CP ++ L +Q C +
Sbjct: 1125 EELDLSMNPLGDGCAQALASLLRTCPVLRTLRLQACGF 1162
>sp|Q06479|YL352_YEAST F-box protein YLR352W OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YLR352W PE=1 SV=1
Length = 807
Score = 33.1 bits (74), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 10/74 (13%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSL--YFPRNSFDNQSCDNSP 58
D L D I++YILS K V C C + ES ++K+L Y+P S D +
Sbjct: 153 QDDLDDNIIKYILSPGKVLSVVDFCGCSGTTFTES--FIKALDKYYPNKSIDQYRLE--- 207
Query: 59 DDIVLKMIYSIVCL 72
++ Y I CL
Sbjct: 208 ---PIQQNYQITCL 218
>sp|A6H779|FBXL2_BOVIN F-box/LRR-repeat protein 2 OS=Bos taurus GN=FBXL2 PE=2 SV=1
Length = 423
Score = 33.1 bits (74), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 149 HKLQNLEIVG-ARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIELPHLEQCKLDFYGL 207
H+L +L + +R+ D + R CP L L L GC + S+
Sbjct: 208 HELVSLNLQSCSRVTDDGVVQLCRGCPRLQALCLSGCGSLTDASLT-------------- 253
Query: 208 GNCSLSVSCPKIQFLEVQGCSWI 230
+L+++CP++Q LE CS +
Sbjct: 254 ---ALALNCPRLQILEAARCSHL 273
>sp|Q1XG89|RNAHL_BOMMO RNA helicase-like protein OS=Bombyx mori GN=RHL PE=2 SV=1
Length = 593
Score = 32.7 bits (73), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 57/130 (43%), Gaps = 23/130 (17%)
Query: 61 IVLKMIYSIVCL---EELVVYTPFSKAGLDSWLMLAGSTLKHL--ELRMDNLADYQGCLE 115
IVLK S+VC+ +EL++Y+ S +T+ L E ++ N+ + ++
Sbjct: 416 IVLKAPDSVVCIGAFQELILYSKIS------------TTVDFLRPENKIANVLQFIDSVQ 463
Query: 116 NPSKLDCISRAKNL-----ESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTAL 170
P + + RA N SL+ ++ + H L NL +V EDP L L
Sbjct: 464 GPKRTVVVCRADNEVKAVESSLRYSNRVVFACDNTMNIHDLYNLNVVWGDFEDPTLGPIL 523
Query: 171 RAC-PNLTNL 179
C NL +L
Sbjct: 524 VCCDSNLVHL 533
>sp|Q9LXS0|FB206_ARATH Putative F-box protein At3g58820 OS=Arabidopsis thaliana
GN=At3g58820 PE=4 SV=1
Length = 413
Score = 32.7 bits (73), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 3 SLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSF 49
SLP+ ++ +ILS + ++ AL + +SKRW+ I ++ +LY F
Sbjct: 6 SLPNELLCHILSFL-TTKEAALTSILSKRWRNLIAFVPNLYIDDTVF 51
>sp|B7ZS37|BAZ2A_XENLA Bromodomain adjacent to zinc finger domain protein 2A OS=Xenopus
laevis GN=baz2a PE=2 SV=1
Length = 1698
Score = 32.3 bits (72), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Query: 114 LENPSKLDCI---SRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPALSTAL 170
L++PS+L S N +SL+ +G ++ P + L+ LE+ + +DP L T+
Sbjct: 254 LDDPSQLPSQLGDSHLLNEDSLEPFGADLIQDPISSTMYDLEELEVGSTKQKDPQLDTSS 313
Query: 171 RACPNLT 177
CP +
Sbjct: 314 LDCPTYS 320
>sp|O74999|RAD7_SCHPO DNA repair protein rhp7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rhp7 PE=3 SV=1
Length = 563
Score = 32.3 bits (72), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 20/87 (22%)
Query: 129 LESLKLWGVLMVSSPKWDVFHKLQNLEIVGARLEDPA------LSTALRACPNLTNL--- 179
L + G +VSS +W F K + +++ L D A ++ + CPNL +L
Sbjct: 295 LTDVSFQGAFLVSSSEWINFFKKRGSKLISLELTDTARIHVSVINAIVDCCPNLISLNLS 354
Query: 180 -----------LLLGCEGVRSVSIELP 195
LL GC + S+ IE P
Sbjct: 355 RIFYLDDECVRLLAGCRNLVSLKIESP 381
>sp|Q9LZP6|FBL70_ARATH F-box/LRR-repeat protein At3g62440 OS=Arabidopsis thaliana
GN=At3g62440 PE=2 SV=1
Length = 457
Score = 32.3 bits (72), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYFPRNSFDNQSCDNSPDD 60
+ +LPD I+ +I S + +AR+ A +SKRW + L+F + D +S + D
Sbjct: 4 ISNLPDEIICHIGSFL-SAREAAFTTVLSKRWHNLFTIVPDLHFDSSVKDGESLTDFVDR 62
Query: 61 IV 62
++
Sbjct: 63 VM 64
>sp|Q9LYZ2|FBL80_ARATH Putative F-box/LRR-repeat protein At5g02930 OS=Arabidopsis thaliana
GN=At5g02930 PE=4 SV=1
Length = 469
Score = 32.0 bits (71), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 49/116 (42%), Gaps = 9/116 (7%)
Query: 151 LQNLEIVGARLEDPALSTALRACPNLTNLLLLGCEGVR----SVSIELPHLEQCKLDFYG 206
L+NL + + D + L CP L +L L C ++ S S+ L LE ++ +
Sbjct: 171 LKNLSLTDCTMSDESFLEILSGCPILESLSLKFCMSLKYLNLSKSLRLTRLEIERISYIR 230
Query: 207 LGNCSLSVSCPKIQFLEVQG----CSWIRVQETNCLRNLSISNNAGRVYMVDFGKL 258
S+ + P I +L ++ C+++ V N+ +S R DF L
Sbjct: 231 APMLSMQIVAPYIHYLRLRDSEAHCTFVDVSSLT-EANVDVSTFHPRTCYHDFDPL 285
>sp|Q6R5N8|TLR13_MOUSE Toll-like receptor 13 OS=Mus musculus GN=Tlr13 PE=1 SV=1
Length = 991
Score = 32.0 bits (71), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 97 LKHLELRMDNLADYQGCLENPSKLDCISRAKNLESLKLWGVLMVSSPKWDVFHKLQNLEI 156
LK+L L +N++D+ G LE L C+ R + ++ + SP+ V L +L
Sbjct: 200 LKYLSLSRNNISDFSGILEAVQHLPCLERLDLTNNSIMY---LDHSPRSLV--SLTHLSF 254
Query: 157 VGARLEDPALSTALRACPNLTNL 179
G +L + L+ + + PNLTNL
Sbjct: 255 EGNKLRE--LNFSALSLPNLTNL 275
>sp|Q96MN2|NALP4_HUMAN NACHT, LRR and PYD domains-containing protein 4 OS=Homo sapiens
GN=NLRP4 PE=1 SV=3
Length = 994
Score = 32.0 bits (71), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 74/154 (48%), Gaps = 19/154 (12%)
Query: 156 IVGARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIEL-----PHLEQCKLDFYGLGNC 210
I A ED L++AL + NL +L +GC + V ++L H + C+L+ GL C
Sbjct: 848 ITAAGCED--LASALISNQNL-KILQIGCNEIGDVGVQLLCRALTHTD-CRLEILGLEEC 903
Query: 211 SLSVSCPKIQFLEVQGCSWIRVQETNCLRNLSISNNAGRVYMVDFGKL--AALESLTLRG 268
L+ +C K V CS +Q+ N L+ ++ G V + + + AL+ L LR
Sbjct: 904 GLTSTCCK-DLASVLTCSKT-LQQLN--LTLNTLDHTGVVVLCEALRHPECALQVLGLRK 959
Query: 269 VQWCWDAISKMLYWASEVKHLYMKVEFTGDFDTL 302
+D ++ L A E ++ + + T D DT+
Sbjct: 960 TD--FDEETQALLTAEEERNPNLTI--TDDCDTI 989
>sp|P0C2C9|FBX12_ARATH F-box only protein 12 OS=Arabidopsis thaliana GN=FBX12 PE=2 SV=1
Length = 404
Score = 32.0 bits (71), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 22/32 (68%), Gaps = 1/32 (3%)
Query: 2 DSLPDAIVQYILSHMKNARDVALCNCVSKRWK 33
+S+P ++ ILS + A+ VA C CVSKRW+
Sbjct: 3 NSIPIDLIYEILSRLP-AKSVARCRCVSKRWR 33
>sp|Q9FFR7|FBL87_ARATH Putative F-box/LRR-repeat protein At5g41630 OS=Arabidopsis
thaliana GN=At5g41630 PE=4 SV=1
Length = 455
Score = 32.0 bits (71), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 1 MDSLPDAIVQYILSHMKNARDVALCNCVSKRWKESIPYLKSLYF 44
+ LPDA++ +ILS + VA ++KRWK + ++ SL F
Sbjct: 14 ISDLPDALIGHILSFLPTIEAVA-TTVLAKRWKPLLSFVHSLDF 56
>sp|Q6NZL6|TONSL_MOUSE Tonsoku-like protein OS=Mus musculus GN=Tonsl PE=2 SV=2
Length = 1363
Score = 32.0 bits (71), Expect = 9.8, Method: Composition-based stats.
Identities = 32/98 (32%), Positives = 42/98 (42%), Gaps = 19/98 (19%)
Query: 151 LQNLEIVGARLEDPA---LSTALRACPNLTNLLL----LGCEGVR------SVSIELPHL 197
L+ L + G RL D L L PNL L L LG EG+R S L +L
Sbjct: 1061 LRELRLAGNRLGDACATELLATLGTTPNLVLLDLSSNHLGQEGLRQLVEGSSGQAALQNL 1120
Query: 198 EQCKLDFYGLGN------CSLSVSCPKIQFLEVQGCSW 229
E+ L LG+ SL +CP + L +Q C +
Sbjct: 1121 EELDLSMNPLGDGCGQALASLLRACPMLSTLRLQACGF 1158
>sp|O49286|SKP2B_ARATH F-box protein SKP2B OS=Arabidopsis thaliana GN=SKP2B PE=1 SV=1
Length = 360
Score = 32.0 bits (71), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 149 HKLQNLEIV-GARLEDPALSTALRACPNLTNLLLLGCEGVRSVSIELPHLEQ-C-KLDFY 205
H+LQ+L++ +++ D +L + R C NLT L L GC + L HL + C KL
Sbjct: 117 HELQDLDLSKSSKITDHSLYSLARGCTNLTKLNLSGCTSFSDTA--LAHLTRFCRKLKIL 174
Query: 206 GLGNCSLSVSCPKIQFL 222
L C +VS +Q +
Sbjct: 175 NLCGCVEAVSDNTLQAI 191
>sp|B0FPE9|NALP3_MACMU NACHT, LRR and PYD domains-containing protein 3 OS=Macaca mulatta
GN=NLRP3 PE=2 SV=1
Length = 1035
Score = 32.0 bits (71), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 68/172 (39%), Gaps = 37/172 (21%)
Query: 151 LQNLEIVGARLEDP---ALSTALRACPNLTNLLL----LGCEGVRSVSIELPHLEQCKLD 203
LQ L +V + L ALS+ L NLT+L L LG +G++ + L H + CKL
Sbjct: 885 LQKLGLVNSGLTSACCSALSSVLSTNQNLTHLYLRGNTLGDKGIKLLCEGLLHPD-CKLQ 943
Query: 204 FYGLGNCSLSVSCPKIQFLEVQGCSW---IRVQETNCLRNLSISNNAGRVYMVDFGKLAA 260
L NC+L+ C W + + LR LS+ NN D G L
Sbjct: 944 VLELDNCNLT-----------SHCCWDLSTLLTSSQSLRKLSLGNN-------DLGDLGV 985
Query: 261 LESLTLRGVQWCWDAISKMLYWASEVKHLYMKVEFTGDFDTLQ-PFPEVDFV 311
+ + Q C L + +Y E +TLQ PE+ V
Sbjct: 986 MMFCEVLKQQSC-------LLQNLGLSEMYFNYETKSALETLQEEKPELTIV 1030
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.136 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 147,316,371
Number of Sequences: 539616
Number of extensions: 5731585
Number of successful extensions: 12082
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 84
Number of HSP's that attempted gapping in prelim test: 11986
Number of HSP's gapped (non-prelim): 179
length of query: 419
length of database: 191,569,459
effective HSP length: 120
effective length of query: 299
effective length of database: 126,815,539
effective search space: 37917846161
effective search space used: 37917846161
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 63 (28.9 bits)