Query 014776
Match_columns 419
No_of_seqs 184 out of 1336
Neff 6.2
Searched_HMMs 13730
Date Mon Mar 25 17:37:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014776.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/014776hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i6la_ c.26.1.1 (A:) Tryptoph 100.0 5.5E-91 4E-95 693.4 34.3 325 79-418 2-326 (326)
2 d1r6ta2 c.26.1.1 (A:82-467) Tr 100.0 5.8E-63 4.2E-67 501.7 18.2 285 77-393 73-381 (386)
3 d1n3la_ c.26.1.1 (A:) Tyrosyl- 100.0 8E-60 5.8E-64 470.6 23.2 278 77-395 31-337 (339)
4 d1j1ua_ c.26.1.1 (A:) Tyrosyl- 100.0 1.4E-58 1.1E-62 455.9 21.1 254 78-377 28-305 (306)
5 d1h3fa1 c.26.1.1 (A:5-347) Tyr 100.0 8.3E-50 6.1E-54 398.9 20.8 252 77-373 32-298 (343)
6 d1jila_ c.26.1.1 (A:) Tyrosyl- 100.0 4.3E-34 3.1E-38 282.3 20.8 251 77-373 30-308 (323)
7 d2ts1a_ c.26.1.1 (A:) Tyrosyl- 100.0 8E-32 5.8E-36 265.3 20.2 252 77-375 29-310 (319)
8 d1j09a2 c.26.1.1 (A:1-305) Glu 98.1 3.9E-05 2.8E-09 72.9 17.2 176 86-289 9-249 (305)
9 d1nzja_ c.26.1.1 (A:) Glutamyl 98.1 1.5E-05 1.1E-09 75.2 13.4 174 86-289 10-231 (286)
10 d1gtra2 c.26.1.1 (A:8-338) Glu 96.9 0.0021 1.5E-07 61.3 11.2 97 79-181 18-124 (331)
11 d1li5a2 c.26.1.1 (A:1-315) Cys 93.8 0.076 5.5E-06 48.9 8.4 73 78-150 22-108 (315)
12 d1pfva2 c.26.1.1 (A:4-140,A:17 93.5 0.15 1.1E-05 47.0 10.0 73 78-150 3-89 (350)
13 d1irxa2 c.26.1.1 (A:3-319) Cla 92.5 0.059 4.3E-06 47.7 5.2 45 78-122 19-68 (317)
14 d2d5ba2 c.26.1.1 (A:1-348) Met 91.4 0.17 1.3E-05 46.2 7.2 65 87-151 14-91 (348)
15 d1ivsa4 c.26.1.1 (A:1-189,A:34 89.8 0.24 1.7E-05 46.9 6.8 82 77-158 33-145 (425)
16 d1ffya3 c.26.1.1 (A:1-200,A:39 87.5 0.12 8.7E-06 50.3 2.8 46 78-123 49-100 (450)
17 d1ivsa4 c.26.1.1 (A:1-189,A:34 85.3 0.16 1.2E-05 48.1 2.4 69 217-309 329-403 (425)
18 d2d5ba2 c.26.1.1 (A:1-348) Met 85.1 0.32 2.3E-05 44.3 4.3 60 216-299 251-310 (348)
19 d1ilea3 c.26.1.1 (A:1-197,A:38 84.2 0.33 2.4E-05 46.2 4.1 44 79-122 40-89 (452)
20 d1h3na3 c.26.1.1 (A:1-225,A:41 83.1 0.52 3.8E-05 45.3 5.0 73 78-150 34-120 (494)
21 d1rqga2 c.26.1.1 (A:1-138,A:17 82.1 1.1 7.7E-05 40.8 6.6 65 86-150 12-90 (361)
22 d1ilea3 c.26.1.1 (A:1-197,A:38 76.8 0.51 3.7E-05 44.8 2.5 21 273-298 394-414 (452)
23 d1irxa2 c.26.1.1 (A:3-319) Cla 70.7 1 7.6E-05 39.1 2.8 25 282-309 276-305 (317)
24 d1pfva2 c.26.1.1 (A:4-140,A:17 69.2 0.99 7.2E-05 41.2 2.4 17 279-299 291-307 (350)
25 d1rqga2 c.26.1.1 (A:1-138,A:17 68.4 0.61 4.5E-05 42.5 0.7 17 279-299 306-322 (361)
26 d1li5a2 c.26.1.1 (A:1-315) Cys 68.1 1.6 0.00011 39.5 3.5 28 279-310 263-295 (315)
27 d1f7ua2 c.26.1.1 (A:136-483) A 64.2 2.3 0.00016 39.4 3.9 76 208-312 213-298 (348)
28 d1ffya3 c.26.1.1 (A:1-200,A:39 62.4 1.2 9.1E-05 42.6 1.7 62 215-299 353-414 (450)
29 d1iq0a2 c.26.1.1 (A:97-466) Ar 61.9 1.7 0.00013 40.6 2.6 68 219-309 254-321 (370)
30 d1f7ua2 c.26.1.1 (A:136-483) A 57.9 2.6 0.00019 39.0 3.0 39 82-120 14-58 (348)
31 d1iq0a2 c.26.1.1 (A:97-466) Ar 57.8 1.1 8.3E-05 41.9 0.4 38 82-119 13-56 (370)
32 d1h3na3 c.26.1.1 (A:1-225,A:41 31.5 8.1 0.00059 36.3 1.8 27 216-242 339-365 (494)
No 1
>d1i6la_ c.26.1.1 (A:) Tryptophanyl-tRNA synthetase (TrpRS) {Bacillus stearothermophilus [TaxId: 1422]}
Probab=100.00 E-value=5.5e-91 Score=693.44 Aligned_cols=325 Identities=48% Similarity=0.771 Sum_probs=311.1
Q ss_pred ceEEEecCCCCcchhhhHHHHHHHHHHHhhcccEEEEEeCcceecCCCCHHHHHHHHHHHHHHHHHcCcCCCceEEEEcC
Q 014776 79 KRIVSGVQPTGSIHLGNYLGAIKNWIALQNSYETLFFIVDLHAITLPYDTQQLSKATRETAAIYLACGIDNSKASVFVQS 158 (419)
Q Consensus 79 ~~i~tGi~PTG~lHLGnylg~ik~~~~lQ~~~~~~i~IaDlhA~t~~~~~~~i~~~~~~~~a~~lA~GlDp~k~~if~qS 158 (419)
.|||||++|||.+|||||+|++++|++||+.++++|+||||||+|++.+++++++++++++++|+|||+||++++||+||
T Consensus 2 ~~v~tG~~PSG~~HlG~~~g~i~~~~~lq~~~~~~i~iAD~halt~~~~~~~l~~~~~~~~~~~lA~G~dp~k~~i~~qS 81 (326)
T d1i6la_ 2 KTIFSGIQPSGVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQS 81 (326)
T ss_dssp CEEEEEECCCSCCBHHHHHHTHHHHHHHTTTSEEEEEECHHHHTTSCCCHHHHHHHHHHHHHHHHHTTCCTTTSEEEEGG
T ss_pred CeeEeCcCCCCccHHHHHHHHHHHHHHHhCCCCEEEEeehHHhhccCCCHHHHHHHHHHHHHHhhhhhccccceEEEeec
Confidence 58999999999999999999999999999999999999999999998899999999999999999999999999999999
Q ss_pred CcchhhHHHHHHhccccHHHHhhhhhHHHHHHhhCCCCccchhhhhhHHHHHhhhhcccceecccCchHHHHHHHHHHHH
Q 014776 159 HVRAHVELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLELTRELAE 238 (419)
Q Consensus 159 ~v~~~~el~w~L~~~~~v~~l~r~~~~k~~~~~~~~~~~~~g~l~YPvLQaADil~~~adivpvG~DQ~~h~eLaRdia~ 238 (419)
++++|.+++|+++|.+++++|+|+.+||++.+.. +++++|+|+||+|||||||+|++|+||||+||+||+|||||||+
T Consensus 82 ~~~~~~el~~~l~~~~~~~~l~r~~~~k~~~~~~--~~~~~g~l~YP~lQaADIl~~~~d~vpvG~DQ~~h~eltRdia~ 159 (326)
T d1i6la_ 82 EVPAHAQAAWMLQCIVYIGELERMTQFKEKSAGK--EAVSAGLLTYPPLMAADILLYNTDIVPVGEDQKQHIELTRDLAE 159 (326)
T ss_dssp GCTHHHHHHHHHHTTSCHHHHHTCHHHHHHHTTC--SSCCHHHHTHHHHHHHHHHTTTCSEEECCGGGHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHhhhhhhhhhhcccchhhcccc--ccCCccccccccccchhHHhcCccccccccchHHHHHHHHHHHH
Confidence 9999999999999999999999999999986543 78899999999999999999999999999999999999999999
Q ss_pred HHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCceecCCCHHHHHHHhhhccCCCCCC
Q 014776 239 RVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCKTDSSAG 318 (419)
Q Consensus 239 r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~~KI~kA~Td~~~~ 318 (419)
|||+.|| ..|..|...+...+++++++.||.+|||||+++++++|+|+|+|++|++||++|+||+.+.
T Consensus 160 r~n~~~~------------~~~~~~~~~i~~~~~~~~~~~d~~~kmskS~~~~~~~I~l~D~~~~i~kKI~~a~td~~~~ 227 (326)
T d1i6la_ 160 RFNKRYG------------ELFTIPEARIPKVGARIMSLVDPTKKMSKSDPNPKAYITLLDDAKTIEKKIKSAVTDSEGT 227 (326)
T ss_dssp HHHHHHC------------SCCCCCEEECCSSSSSCBCSSCTTSBCCTTCSCGGGCCBTTCCHHHHHHHHHHCCCCSSCC
T ss_pred HhhhccC------------CcccccccccccccceeeecCCccccccccCCCccceeeccCCHHHHHHHHHhhhccccCC
Confidence 9999998 4688888877766678989889999999999988889999999999999999999999999
Q ss_pred cccCCCCCCccchHHHHHHhcCCCCHHHHHHHHhcCCcchHHHHHHHHHHHhhhHHHHHHHHHhcChHHHHHHHHHHHHH
Q 014776 319 LEFDNLERPECNNLLSIYQLISGKTKGEVAEECQNMNWGTFKPLLTDALIEHLHPIQVRYEEIMSDSAYLDKVLADGAAK 398 (419)
Q Consensus 319 i~~~~~~rp~v~~ll~i~~~~~~~~~eel~~~~~~l~~~dlK~~La~~I~~~L~pirer~~~~~~d~~~l~~iL~~Gaek 398 (419)
++++++++|+++|++.+|..+++.+.+++..+|.+.++++||+.|++.|+++|+||||||+++++|+ +|++||++|++|
T Consensus 228 ~~~~~~~~p~~~~l~~i~~~~~~~~~~e~~~~~~~~~~gdlK~~lae~i~~~L~PiRer~~~l~~~~-~l~~iL~~Ga~k 306 (326)
T d1i6la_ 228 IRYDKEAKPGISNLLNIYSTLSGQSIEELERQYEGKGYGVFKADLAQVVIETLRPIQERYHHWMESE-ELDRVLDEGAEK 306 (326)
T ss_dssp CCCCTTTCHHHHHHHHHHHHHHCCCHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTCT-HHHHHHHHHHHH
T ss_pred ccccccCCCCccHHHHHHHHcCCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHhHHHHHHHHHHhCCH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999887 699999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCC
Q 014776 399 AADIADATLNNVYQAMGFLR 418 (419)
Q Consensus 399 Ar~iA~~tl~~Vr~a~Gl~~ 418 (419)
||++|++||++||++|||.+
T Consensus 307 Ar~~A~~tl~~Vr~~~Gl~r 326 (326)
T d1i6la_ 307 ANRVASEMVRKMEQAMGLGR 326 (326)
T ss_dssp HHHHHHHHHHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999975
No 2
>d1r6ta2 c.26.1.1 (A:82-467) Tryptophanyl-tRNA synthetase (TrpRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=5.8e-63 Score=501.74 Aligned_cols=285 Identities=18% Similarity=0.254 Sum_probs=244.3
Q ss_pred CCceEEEecCCCCc-chhhhHHHHHH-HHHHHhhc--ccEEEEEeCcceecC-CCCHHHHHHHHHHHHHHHHHcCcCCCc
Q 014776 77 VKKRIVSGVQPTGS-IHLGNYLGAIK-NWIALQNS--YETLFFIVDLHAITL-PYDTQQLSKATRETAAIYLACGIDNSK 151 (419)
Q Consensus 77 ~~~~i~tGi~PTG~-lHLGnylg~ik-~~~~lQ~~--~~~~i~IaDlhA~t~-~~~~~~i~~~~~~~~a~~lA~GlDp~k 151 (419)
+++++|||++|||. +|||||+++++ +| +|+. ++++|+|||+||+++ +.+++++++++++++++|+|+||||+|
T Consensus 73 kp~~vytG~~PSg~~lHlGh~v~~~~~~~--~q~~~~~~v~i~iaD~~a~~~~~~~~~e~~~~~~e~~~~~lA~GlDp~k 150 (386)
T d1r6ta2 73 KPFYLYTGRGPSSEAMHVGHLIPFIFTKW--LQDVFNVPLVIQMTDDEKYLWKDLTLDQAYGDAVENAKDIIACGFDINK 150 (386)
T ss_dssp CCEEEEEEECCCTTCCBGGGHHHHHHHHH--HHHHHTCCEEEEECHHHHHHHSSCCHHHHHHHHHHHHHHHHTTCCCTTS
T ss_pred CCeEEEeccCCCCchhHHHHHHHHHHHHH--HHHhcccceEEEecchHhhhcccCCHHHHHHHHHHHHHHHHHhCCCccc
Confidence 36899999999997 89999999885 35 7764 689999999999997 569999999999999999999999999
Q ss_pred eEEEEcCCcchhhHHHHHHhccccHHHHhhhhhHHHHHHhhC-CCCccchhhhhhHHHHHhhhhcc-----------cce
Q 014776 152 ASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSHKAG-GENVGVALLTYPVLMASDILLYQ-----------SDF 219 (419)
Q Consensus 152 ~~if~qS~v~~~~el~w~L~~~~~v~~l~r~~~~k~~~~~~~-~~~~~~g~l~YPvLQaADil~~~-----------adi 219 (419)
++||.||+|.. ++.|++.+. .++.|+.++++..+..+ .+++++|+++||+|||||||+++ +++
T Consensus 151 t~i~~~s~~~~--~l~~~~~~~---~~l~r~~t~~~~k~~~~~~~~~~~g~~~YP~lQaaDil~~~~d~~~~~~~~~~~l 225 (386)
T d1r6ta2 151 TFIFSDLDYMG--MSSGFYKNV---VKIQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFPQIFRDRTDIQCL 225 (386)
T ss_dssp EEEEEHHHHGG--GCTTHHHHH---HHHHHTCBHHHHHHHHCCCTTSBHHHHHHHHHHHGGGSGGGCHHHHTTCCCCEEE
T ss_pred eEEEeCcHHHH--HHHHHHHHH---HHHHHhcchhHHHHhhccccCCcCcccccHHHHHHHHHHhcChhhhccccccccc
Confidence 99999999854 444554443 35677778877777666 57889999999999999999987 569
Q ss_pred ecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCceecCC
Q 014776 220 VPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLD 299 (419)
Q Consensus 220 vpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~D 299 (419)
||||.||+||+++|||+|+||| +++|..++++ ++|||+++++|||||+| +|+|+|+|
T Consensus 226 vpvG~DQ~~h~~ltRDia~r~~------------------~~~p~~l~~~---~lpgL~G~~~KMSsS~~--~s~I~l~D 282 (386)
T d1r6ta2 226 IPCAIDQDPYFRMTRDVAPRIG------------------YPKPALLHST---FFPALQGAQTKMSASDP--NSSIFLTD 282 (386)
T ss_dssp EEEEGGGHHHHHHHHHHGGGGT------------------CCCCEEEEEC---CCEETTEEEEECCTTST--TCCCBTTC
T ss_pred cccchhHHHHHHHHHHHHHHhC------------------CCCceeeccc---cccCCCCcccccccCCC--CceeeecC
Confidence 9999999999999999999987 6789888875 99999766679999997 59999999
Q ss_pred CHHHHHHHhhhccCCCCCCcccC---CCCCCccchHHHHHHhc--CCCCHHHHHHHHh--cCCcchHHHHHHHHHHHhhh
Q 014776 300 PKDVIANKIKRCKTDSSAGLEFD---NLERPECNNLLSIYQLI--SGKTKGEVAEECQ--NMNWGTFKPLLTDALIEHLH 372 (419)
Q Consensus 300 spe~I~~KI~kA~Td~~~~i~~~---~~~rp~v~~ll~i~~~~--~~~~~eel~~~~~--~l~~~dlK~~La~~I~~~L~ 372 (419)
+|++|++||++++|++.....++ .+++|++++++.|+.++ +++++++++++|. +++|++||+.||+.|+++|+
T Consensus 283 ~~~~i~~KI~~~~~~~~~~~~~e~~~~~g~~~~~v~~~~l~~f~~d~~~~eel~~~y~~G~l~~gd~K~~lae~l~~~l~ 362 (386)
T d1r6ta2 283 TAKQIKTKVNKHAFSGGRDTIEEHRQFGGNCDVDVSFMYLTFFLEDDDKLEQIRKDYTSGAMLTGELKKALIEVLQPLIA 362 (386)
T ss_dssp CHHHHHHHHHHHSCCCSCSSHHHHHHHCCCTTTCHHHHHHHHHCCCHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHhhheeeecCCcccccccccCCCcchhHHHHHHHHHcCCHhHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999886543332 25788999999999876 4568999999996 58999999999999999999
Q ss_pred HHHHHHHHHhcChHHHHHHHH
Q 014776 373 PIQVRYEEIMSDSAYLDKVLA 393 (419)
Q Consensus 373 pirer~~~~~~d~~~l~~iL~ 393 (419)
|+|+||+++.+ +.++++|.
T Consensus 363 ~~rekr~~~~~--~~v~~~l~ 381 (386)
T d1r6ta2 363 EHQARRKEVTD--EIVKEFMT 381 (386)
T ss_dssp HHHHHHTTCCH--HHHHHHTS
T ss_pred HHHHHHHHHHH--HHHHHHhc
Confidence 99999998854 36777764
No 3
>d1n3la_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=8e-60 Score=470.55 Aligned_cols=278 Identities=22% Similarity=0.229 Sum_probs=217.8
Q ss_pred CCceEEEecCCCCcchhhhHHHHHHHHHHHhhc-ccEEEEEeCcceecCC-C-CHHHHHHHHH----HHHHHHHHcCcCC
Q 014776 77 VKKRIVSGVQPTGSIHLGNYLGAIKNWIALQNS-YETLFFIVDLHAITLP-Y-DTQQLSKATR----ETAAIYLACGIDN 149 (419)
Q Consensus 77 ~~~~i~tGi~PTG~lHLGnylg~ik~~~~lQ~~-~~~~i~IaDlhA~t~~-~-~~~~i~~~~~----~~~a~~lA~GlDp 149 (419)
++++||+||+|||.+|||||+|+++.| .+|+. ++++|+||||||++++ . +.+..+.+.. .+.+.|+|+|+||
T Consensus 31 ~~~~vy~G~~PTg~lHlG~~l~~~~l~-~~q~~g~~~~~~IaD~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~g~d~ 109 (339)
T d1n3la_ 31 RELKIYWGTATTGKPHVAYFVPMSKIA-DFLKAGCEVTILFADLHAYLDNMKAPWELLELRVSYYENVIKAMLESIGVPL 109 (339)
T ss_dssp SCCEEEEEECCSSCCBGGGHHHHHHHH-HHHHTTCEEEEEECHHHHHHTTTTSCHHHHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeeCCCCccHHHHHHHHHHHH-HHHHCCCcEEEEecchhhhccCCCCchHHHHHHHHHHHHHHHHHHHhhccCh
Confidence 468999999999999999999988654 56665 8999999999999973 3 3344333333 3557788999999
Q ss_pred CceEEEEcCCcchhhHHHHHHhccccHHHHhhhhhHHHHHHhhCCCCccchhhhhhHHHHHhhhhcccceecccCchHHH
Q 014776 150 SKASVFVQSHVRAHVELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQH 229 (419)
Q Consensus 150 ~k~~if~qS~v~~~~el~w~L~~~~~v~~l~r~~~~k~~~~~~~~~~~~~g~l~YPvLQaADil~~~adivpvG~DQ~~h 229 (419)
+|+.||+||+|+.+.+..|.+.+..+...+.++.......... .+++++|+|+||+||||||++|++|+||||.||+||
T Consensus 110 ~k~~i~~~sd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~f~YP~lQaaDil~~~ad~v~~G~DQ~~~ 188 (339)
T d1n3la_ 110 EKLKFIKGTDYQLSKEYTLDVYRLSSVVTQHDSKKAGAEVVKQ-VEHPLLSGLLYPGLQALDEEYLKVDAQFGGIDQRKI 188 (339)
T ss_dssp TTEEEEEGGGTTTSHHHHHHHHHHHTTSCHHHHHHHTTTTSCC-CSSCCHHHHHHHHHHHHHHHHTTCSEEEEEGGGHHH
T ss_pred HHheeeecChHhhhhhHHHHHhhHHHHHHHHHHHHHHHHHhcc-CCCCccccccccHHHHHHHHhccCCccccchhHHHH
Confidence 9999999999988877777665554444444444333221122 367899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCceecCCCHHHHHHHhh
Q 014776 230 LELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIK 309 (419)
Q Consensus 230 ~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~~KI~ 309 (419)
++++||+|+|||+ +.|..+..+ ++|+| +| .|||||+| +|+|+|+|++++|++||+
T Consensus 189 i~l~rd~a~r~~~------------------~~~~~l~~p---ll~~l-~g-~kmsks~~--~~~I~l~D~~~~I~kKI~ 243 (339)
T d1n3la_ 189 FTFAEKYLPALGY------------------SKRVHLMNP---MVPGL-TG-SKMSSSEE--ESKIDLLDRKEDVKKKLK 243 (339)
T ss_dssp HHHHHHHGGGGTC------------------CCCEEEEEC---CCCCS-SC-C---------CCSCBTTCCHHHHHHHHH
T ss_pred HHHHHHHHhhhcc------------------Ccceeeeec---ccccc-cc-ccccccch--hhcccccCCHHHHHHHHh
Confidence 9999999999984 345566654 89999 56 58999986 599999999999999999
Q ss_pred hccCCCCCCcccCCCCCCccchHHHHHHhc--------------------CCCCHHHHHHHHh--cCCcchHHHHHHHHH
Q 014776 310 RCKTDSSAGLEFDNLERPECNNLLSIYQLI--------------------SGKTKGEVAEECQ--NMNWGTFKPLLTDAL 367 (419)
Q Consensus 310 kA~Td~~~~i~~~~~~rp~v~~ll~i~~~~--------------------~~~~~eel~~~~~--~l~~~dlK~~La~~I 367 (419)
+|+||+. +++.+++++++.++ ++++++|++++|. +++++|||++|+++|
T Consensus 244 ~a~td~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~y~~g~l~~~dlK~~la~~i 314 (339)
T d1n3la_ 244 KAFCEPG---------NVENNGVLSFIKHVLFPLKSEFVILRDEKWGGNKTYTAYVDLEKDFAAEVVHPGDLKNSVEVAL 314 (339)
T ss_dssp TCCCCTT---------CCSSCHHHHHHHHTTGGGTTCEEECCCGGGTCCEEESSHHHHHHHHHTTCSCHHHHHHHHHHHH
T ss_pred hccCCCC---------CcccCccccchhhhccchhhccccccHHHhcCCCCcCCHHHHHHHHhcCCCCHHHHHHHHHHHH
Confidence 9999864 34557777777643 2367999999996 589999999999999
Q ss_pred HHhhhHHHHHHHHHhcChHHHHHHHHHH
Q 014776 368 IEHLHPIQVRYEEIMSDSAYLDKVLADG 395 (419)
Q Consensus 368 ~~~L~pirer~~~~~~d~~~l~~iL~~G 395 (419)
+++|+||||+|+ ++ ++++++.+|
T Consensus 315 ~~~l~pire~~~----~~-e~~~l~~~~ 337 (339)
T d1n3la_ 315 NKLLDPIREKFN----TP-ALKKLASAA 337 (339)
T ss_dssp HHHHHHHHHHTT----SH-HHHHHHHHH
T ss_pred HHHHHHHHHHhC----CH-HHHHHHhcc
Confidence 999999999984 33 588888876
No 4
>d1j1ua_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=100.00 E-value=1.4e-58 Score=455.89 Aligned_cols=254 Identities=26% Similarity=0.368 Sum_probs=207.3
Q ss_pred CceEEEecCCCCcchhhhHHHHHHHHHHHhhc-ccEEEEEeCcceecC-CCCHHHHHHHHHHHHHHHHHcCcCCCceEEE
Q 014776 78 KKRIVSGVQPTGSIHLGNYLGAIKNWIALQNS-YETLFFIVDLHAITL-PYDTQQLSKATRETAAIYLACGIDNSKASVF 155 (419)
Q Consensus 78 ~~~i~tGi~PTG~lHLGnylg~ik~~~~lQ~~-~~~~i~IaDlhA~t~-~~~~~~i~~~~~~~~a~~lA~GlDp~k~~if 155 (419)
++++|+||+|||.+|||||++ +.+|++||+. ++++|+||||||+++ +.+++++++++.+++++|+|+|+|| .++
T Consensus 28 ~~~~y~G~~PTG~lHlGh~v~-~~~~~~lq~~g~~~~~~IaD~~a~~~~~~~~~~~~~~~~~~~~~~~a~G~~~---~~~ 103 (306)
T d1j1ua_ 28 EKSAYIGFEPSGKIHLGHYLQ-IKKMIDLQNAGFDIIILLADLHAYLNQKGELDEIRKIGDYNKKVFEAMGLKA---KYV 103 (306)
T ss_dssp SEEEEEEECCCSSCBHHHHHH-HHHHHHHHHTTEEEEEEECHHHHHHTTCCCHHHHHHHHHHHHHHHHHTTCCC---EEE
T ss_pred CCeEEEeECCCCcchHHHHHH-HHHHHHHHHCCCcEEEEeccHHHHhhhccchhhhhhhhhHHHHHHHhhhccc---ccc
Confidence 568999999999999999995 7899999998 799999999999998 4589999999999999999999998 467
Q ss_pred EcCCcchhhHHH---HHHhccccHHHHhhhhhHHHHHHhhCCCCccchhhhhhHHHHHhhhhcccceecccCchHHHHHH
Q 014776 156 VQSHVRAHVELM---WLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVPVGEDQKQHLEL 232 (419)
Q Consensus 156 ~qS~v~~~~el~---w~L~~~~~v~~l~r~~~~k~~~~~~~~~~~~~g~l~YPvLQaADil~~~adivpvG~DQ~~h~eL 232 (419)
+||+++.+.+.. |.+++.++++++.+..+++ .+.+ ++.++|+|+||+||||||+++++|+||||.||++|+++
T Consensus 104 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~r~~-~~~~~~~~~YP~lQaaDil~~~~~~~~~G~DQ~~~~~l 179 (306)
T d1j1ua_ 104 YGSEFQLDKDYTLNVYRLALKTTLKRARRSMELI---ARED-ENPKVAEVIYPIMQVNDIHYLGVDVAVGGMEQRKIHML 179 (306)
T ss_dssp EGGGTTTSHHHHHHHHHHHHHSCHHHHHHHTTTT---SCCC-SSCCTHHHHHHHHHHHHHHHHTCSEEEEEGGGHHHHHH
T ss_pred ccchhhhhhhHHHhhhhhhhhhhhhhhhhhhhhh---hhhh-hccccccccccchhhcchhhcCcceeccchhhHHHHHH
Confidence 788876555544 4466667766555544443 3333 78899999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCceecCCCHHHHHHHhhhcc
Q 014776 233 TRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCK 312 (419)
Q Consensus 233 aRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dspe~I~~KI~kA~ 312 (419)
+||++++ .|..+.. ++|||| ||++|||||. +|+|+|+|+|++|++|||+|+
T Consensus 180 ~rdl~~~----------------------~~~~~~~---~~l~gl-dG~~KMSKS~---~n~I~L~D~~e~I~~KI~~a~ 230 (306)
T d1j1ua_ 180 ARELLPK----------------------KVVCIHN---PVLTGL-DGEGKMSSSK---GNFIAVDDSPEEIRAKIKKAY 230 (306)
T ss_dssp HHHHSSS----------------------CCEEEEE---CCCCCT-TCCC----------CSCBTTCCHHHHHHHHHHSC
T ss_pred hhhcccc----------------------cceeccc---ccccCc-cccccccccc---ccccccCCCHHHHHHHHhhee
Confidence 9999643 2444544 489999 7888999995 589999999999999999999
Q ss_pred CCCCCCcccCCCCCCccchHHHHHHhc-----------------CCCCHHHHHHHHh--cCCcchHHHHHHHHHHHhhhH
Q 014776 313 TDSSAGLEFDNLERPECNNLLSIYQLI-----------------SGKTKGEVAEECQ--NMNWGTFKPLLTDALIEHLHP 373 (419)
Q Consensus 313 Td~~~~i~~~~~~rp~v~~ll~i~~~~-----------------~~~~~eel~~~~~--~l~~~dlK~~La~~I~~~L~p 373 (419)
||+.. ++.++.+.++.++ +++++++++++|+ +++|++||+.||+.|+++|+|
T Consensus 231 td~~~---------~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~g~l~~~~~K~~lae~i~~~l~p 301 (306)
T d1j1ua_ 231 CPAGV---------VEGNPIMEIAKYFLEYPLTIKRPEKFGGDLTVNSYEELESLFKNKELHPMDLKNAVAEELIKILEP 301 (306)
T ss_dssp CCTTC---------CTTCHHHHHHHHTCCSSEEECCCGGGTCCEEESSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHH
T ss_pred ccCCc---------ccCCCchHHHHHhhcccHhhccHHHHhccCChhhHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Confidence 98743 3445666666543 4578999999997 589999999999999999999
Q ss_pred HHHH
Q 014776 374 IQVR 377 (419)
Q Consensus 374 irer 377 (419)
||||
T Consensus 302 irer 305 (306)
T d1j1ua_ 302 IRKR 305 (306)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9997
No 5
>d1h3fa1 c.26.1.1 (A:5-347) Tyrosyl-tRNA synthetase (TyrRS) {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=8.3e-50 Score=398.85 Aligned_cols=252 Identities=19% Similarity=0.211 Sum_probs=194.0
Q ss_pred CCceEEEecCCCCc-chhhhHHHHHHHHHHHhhc-ccEEEEEeCcceecCCCC----------HHHHHHHHHHHHHHHHH
Q 014776 77 VKKRIVSGVQPTGS-IHLGNYLGAIKNWIALQNS-YETLFFIVDLHAITLPYD----------TQQLSKATRETAAIYLA 144 (419)
Q Consensus 77 ~~~~i~tGi~PTG~-lHLGnylg~ik~~~~lQ~~-~~~~i~IaDlhA~t~~~~----------~~~i~~~~~~~~a~~lA 144 (419)
+++++|+||+|||. +|||||+|+ .+|+.||+. ++++|+||||||++++.+ .+.+.++.....+....
T Consensus 32 ~~~~vY~G~~PTg~sLHlGh~v~~-~~~~~lq~~g~~~~~~iad~~a~~~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 110 (343)
T d1h3fa1 32 RPLTVKLGADPTRPDLHLGHAVVL-RKMRQFQELGHKVVLIIGDFTGMIGDPSGRSKTRPPLTLEETRENAKTYVAQAGK 110 (343)
T ss_dssp SCCEEEEEECTTCCSCBHHHHHHH-HHHHHHHHTTCEEEEEECCCC---------------------HHHHHHHHHHHTT
T ss_pred CCCEEEEeecCCCCcccHHHHHHH-HHHHHHHHCCCceEEEEechhhhhhcccchhhhhhhhhHHHHHHHHHHHHHHHhh
Confidence 46899999999995 999999995 579999998 799999999999997422 23333333333332221
Q ss_pred -cCcCCCceEEEEcCCcchhhHHHHH--HhccccHHHHhhhhhHHHHHHhhCCCCccchhhhhhHHHHHhhhhcccceec
Q 014776 145 -CGIDNSKASVFVQSHVRAHVELMWL--LSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLYQSDFVP 221 (419)
Q Consensus 145 -~GlDp~k~~if~qS~v~~~~el~w~--L~~~~~v~~l~r~~~~k~~~~~~~~~~~~~g~l~YPvLQaADil~~~adivp 221 (419)
.+.++++..|+.+++|.....+.|. +++..+++++.+..+++..... ..+.++|+|+||+|||+||+++++|+||
T Consensus 111 ~~~~~~~~~~i~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~f~YP~lQaaDi~~l~~~~vp 188 (343)
T d1h3fa1 111 ILRQEPHLFELRYNSEWLEGLTFKEVVRLTSLMTVAQMLEREDFKKRYEA--GIPISLHELLYPFAQAYDSVAIRADVEM 188 (343)
T ss_dssp TSCCCTTTEEEEETHHHHTTCBHHHHHHHHTTSBHHHHTTSHHHHHHHHT--TCCCBGGGGTHHHHHHHHHHHHTCSEEE
T ss_pred hhcccccchhheechHHHhhhhHHHHHHhcccceecchhhhhhhhhcccc--cccccchhhhhHHHHhhhhhhhcccccc
Confidence 2445678899999998765544444 4678899999988888865433 2678999999999999999999999999
Q ss_pred ccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCceecCCCH
Q 014776 222 VGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPK 301 (419)
Q Consensus 222 vG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~Dsp 301 (419)
||.||+||+++|||+|+|||+.+ |..+..+ ++||| +|++|||||. +|+|+|+|+|
T Consensus 189 ~G~DQ~~~i~l~Rdla~r~~~~~------------------~~~~~~p---~L~gl-dG~~KMSKS~---~naI~L~dsp 243 (343)
T d1h3fa1 189 GGTDQRFNLLVGREVQRAYGQSP------------------QVCFLMP---LLVGL-DGREKMSKSL---DNYIGLTEPP 243 (343)
T ss_dssp EEGGGHHHHHHHHHHHHHTTCCC------------------CEEEEEC---CCBCT-TSSSBCCGGG---TCCCBTTSCH
T ss_pred cccchHHHHHHHHHHHhhcCccc------------------cceeecc---ccccc-cccchhhccc---ccceeeechh
Confidence 99999999999999999999543 4455554 99999 6778999996 5899999999
Q ss_pred HHHHHHhhhccCCCCCCcccCCCCCCccchHHHHHHhcCCCCHHHHHHHHhcCCcchHHHHHHHHHHHhhhH
Q 014776 302 DVIANKIKRCKTDSSAGLEFDNLERPECNNLLSIYQLISGKTKGEVAEECQNMNWGTFKPLLTDALIEHLHP 373 (419)
Q Consensus 302 e~I~~KI~kA~Td~~~~i~~~~~~rp~v~~ll~i~~~~~~~~~eel~~~~~~l~~~dlK~~La~~I~~~L~p 373 (419)
++|++||+++ +| +.+.+|+++|++.+.+|+++-+.. ++.++|+.||+.|+..++.
T Consensus 244 ~~i~~Ki~~~-~D---------------~~v~~~~~~~t~~~~~ei~~~~~~-~~~~~k~~La~~i~~~~~~ 298 (343)
T d1h3fa1 244 EAMFKKLMRV-PD---------------PLLPSYFRLLTDLEEEEIEALLKA-GPVPAHRVLARLLTAAYAL 298 (343)
T ss_dssp HHHHHHHHTS-CG---------------GGHHHHHHHHCCCCHHHHHHHHHH-CHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcC-Cc---------------cchhhHHHHccCCCHHHHHHHHHh-CCHHHHHHHHHHHHHHHcC
Confidence 9999999985 32 235677777888888888776653 6789999999999987754
No 6
>d1jila_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=100.00 E-value=4.3e-34 Score=282.33 Aligned_cols=251 Identities=13% Similarity=0.129 Sum_probs=198.7
Q ss_pred CCceEEEecCCCCc-chhhhHHHHHHHHHHHhhc-ccEEEEEeCcceecC-C---------CCHHHHHHHHHHHHHHHHH
Q 014776 77 VKKRIVSGVQPTGS-IHLGNYLGAIKNWIALQNS-YETLFFIVDLHAITL-P---------YDTQQLSKATRETAAIYLA 144 (419)
Q Consensus 77 ~~~~i~tGi~PTG~-lHLGnylg~ik~~~~lQ~~-~~~~i~IaDlhA~t~-~---------~~~~~i~~~~~~~~a~~lA 144 (419)
.++++|+|++|||. +||||+++.+ ...+||+. |+++++|+|+||+++ | .+.+.+++|...+..++..
T Consensus 30 ~~~~~Y~G~DPTa~sLHlGhlv~l~-~l~~~q~~Gh~~i~LiG~~T~~iGDPsgk~~~R~~l~~~~i~~n~~~~~~~~~~ 108 (323)
T d1jila_ 30 EQVTLYCGADPTADSLHIGHLLPFL-TLRRFQEHGHRPIVLIGGGTGMIGDPSGKSEERVLQTEEQVDKNIEGISKQMHN 108 (323)
T ss_dssp SCCEEEEEECCSSSSCBHHHHHHHH-HHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEcccCCCccccHHHHHHHH-HHHHHHHhCCceEEeehhhhhhccCCCccchhhhhhhHHHHHHHHhhhhhhhhh
Confidence 36899999999998 9999999965 66779998 789999999999996 3 2568999988887777655
Q ss_pred cC--cCCCceEEEEcCCcch---hhHHHHHHhccccHHHHhhhhhHHHHHHhhCCCCccchhhhhhHHHHHhhhh----c
Q 014776 145 CG--IDNSKASVFVQSHVRA---HVELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILL----Y 215 (419)
Q Consensus 145 ~G--lDp~k~~if~qS~v~~---~~el~w~L~~~~~v~~l~r~~~~k~~~~~~~~~~~~~g~l~YPvLQaADil~----~ 215 (419)
.. .+++++.|+.+++|.. ..+..-.++..++++++.+.-.++.+ .. .++++.+|+||+||+.|+++ +
T Consensus 109 ~~~~~~~~~~~i~~n~~w~~~~~~~~~l~~~~~~~~v~~ml~~d~~~~R---~~-~~is~~Ef~YpllQ~~Df~~l~~~~ 184 (323)
T d1jila_ 109 IFEFGTDHGAVLVNNRDWLGQISLISFLRDYGKHVGVNYMLGKDSIQSR---LE-HGISYTEFTYTILQAIDFGHLNREL 184 (323)
T ss_dssp HSCCSSSSSCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTCGGGHHH---HT-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhcccccceEEechhhhhccchHHHHHHHHhhhhhhhHHHHhHHHHHH---hc-ccccHhhHHHHHHHHHHHHHHHHHh
Confidence 42 2467889999999843 23333346788999999888887743 32 67999999999999999987 6
Q ss_pred ccceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCce
Q 014776 216 QSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 295 (419)
Q Consensus 216 ~adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 295 (419)
++|++.+|.||+.++.++||+++++. | ..|...++. +.+.+. +| +|||||. +|+|
T Consensus 185 ~~~iqiGGsDQ~~Ni~~Grdl~~~~~---~---------------~~~~~~it~--pLl~~~-~G-~Km~KS~---~n~i 239 (323)
T d1jila_ 185 NCKIQVGGSDQWGNITSGIELMRRMY---G---------------QTDAYGLTI--PLVTKS-DG-KKFGKSE---SGAV 239 (323)
T ss_dssp CEEEEEEEGGGHHHHHHHHHHHHHHH---C---------------CCCCEEEEE--CCCBCT-TS-CBTTBCS---SSBC
T ss_pred hchhhhhccccHHHhhhhhhhhhhhc---c---------------cccceEEec--ccccch-hh-hhhhhcC---CCCe
Confidence 89999999999999999999999964 1 123333333 366665 67 7999997 6899
Q ss_pred ecCC---CHHHHHHHhhhccCCCCCCcccCCCCCCccchHHHHHHhcCCC---CHHHHHHHHh-cCCcchHHHHHHHHHH
Q 014776 296 NLLD---PKDVIANKIKRCKTDSSAGLEFDNLERPECNNLLSIYQLISGK---TKGEVAEECQ-NMNWGTFKPLLTDALI 368 (419)
Q Consensus 296 ~L~D---spe~I~~KI~kA~Td~~~~i~~~~~~rp~v~~ll~i~~~~~~~---~~eel~~~~~-~l~~~dlK~~La~~I~ 368 (419)
++++ +|+++++|+++.. ...+..|+.+|++. +++++.+++. +.++.++|+.||+.|+
T Consensus 240 ~l~~~~tsP~~~y~k~~n~~----------------D~~i~~yl~~~T~l~~~ei~~l~~~~~~~~~pr~~Kk~LA~ei~ 303 (323)
T d1jila_ 240 WLDAEKTSPYEFYQFWINQS----------------DEDVIKFLKYFTFLGKEEIDRLEQSKNEAPHLREAQKTLAEEVT 303 (323)
T ss_dssp BSSTTTSCHHHHHHHHHTCC----------------HHHHHHHHHHHCCCCHHHHHHHHHHHHHCGGGCHHHHHHHHHHH
T ss_pred eeecccCChHHHHHHhhcCC----------------HHHHHHHHHHHhcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 9987 6999999999864 13556677766655 5566666665 5689999999999999
Q ss_pred HhhhH
Q 014776 369 EHLHP 373 (419)
Q Consensus 369 ~~L~p 373 (419)
++++.
T Consensus 304 ~~~HG 308 (323)
T d1jila_ 304 KFIHG 308 (323)
T ss_dssp HHHHC
T ss_pred HHHCC
Confidence 99876
No 7
>d2ts1a_ c.26.1.1 (A:) Tyrosyl-tRNA synthetase (TyrRS) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]}
Probab=99.98 E-value=8e-32 Score=265.35 Aligned_cols=252 Identities=12% Similarity=0.139 Sum_probs=200.0
Q ss_pred CCceEEEecCCCCc-chhhhHHHHHHHHHHHhhc-ccEEEEEeCcceecC-C---------CCHHHHHHHHHHHHHHH--
Q 014776 77 VKKRIVSGVQPTGS-IHLGNYLGAIKNWIALQNS-YETLFFIVDLHAITL-P---------YDTQQLSKATRETAAIY-- 142 (419)
Q Consensus 77 ~~~~i~tGi~PTG~-lHLGnylg~ik~~~~lQ~~-~~~~i~IaDlhA~t~-~---------~~~~~i~~~~~~~~a~~-- 142 (419)
+++++|+|++||+. +||||+++++ ....||+. ++++++|+|.|++++ | .+.+.+++|+..+..++
T Consensus 29 ~~~~~Y~G~DPTa~sLHlGhlv~l~-~l~~~q~~Gh~~i~LiG~~T~~IGDPsgk~~eR~~l~~e~i~~n~~~~~~q~~~ 107 (319)
T d2ts1a_ 29 ERVTLYCGFDPTADSLHIGHLATIL-TMRRFQQAGHRPIALVGGATGLIGDPSGKKSERTLNAKETVEAWSARIKEQLGR 107 (319)
T ss_dssp SCCEEEEEECCSSSSCBGGGHHHHH-HHHHHHHTTCEEEEEECTTGGGTCCCTTCSSCCCCCCHHHHHHHHHHHHHHHTT
T ss_pred CCceEEEeecCCCCcchHHHHHHHH-HHHHHHHcCCceeEEeeehhhccCCCcccchhhhcCCHHHHHHHHHHHHHHHHH
Confidence 46899999999998 9999999965 66679998 789999999999997 3 25688888887666555
Q ss_pred -HHcCcCCCceEEEEcCCcch---hhHHHHHHhccccHHHHhhhhhHHHHHHhhCCCCccchhhhhhHHHHHhhhhc---
Q 014776 143 -LACGIDNSKASVFVQSHVRA---HVELMWLLSSATPIGWLNKMIQFKEKSHKAGGENVGVALLTYPVLMASDILLY--- 215 (419)
Q Consensus 143 -lA~GlDp~k~~if~qS~v~~---~~el~w~L~~~~~v~~l~r~~~~k~~~~~~~~~~~~~g~l~YPvLQaADil~~--- 215 (419)
+..+.++++++|+.+++|.. ..+..-.++..++++++.+.-.|+.+ .. .++++.+|+||+||+.|.+.+
T Consensus 108 ~~~~~~~~~~~~iv~N~~w~~~~~~~~~l~~~g~~~tv~~ml~rd~v~~R---~~-~~is~~Ef~Y~llQayDf~~l~~~ 183 (319)
T d2ts1a_ 108 FLDFEADGNPAKIKNNYDWIGPLDVITFLRDVGKHFSVNYMMAKESVQSR---IE-TGISFTEFSYMMLQAYDFLRLYET 183 (319)
T ss_dssp SSCSSCSSSCCEEEETHHHHTTCCHHHHHHHTGGGCCHHHHHTSHHHHTT---TT-TCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcccccccccceeehHHHHhhHHHHHHHHHHccccchhhhhhhHHHHHh---cc-cCcchhhhHHHHHHHHHHHHHhhc
Confidence 55667888999999999853 23333346788999988887777743 32 679999999999999999998
Q ss_pred -ccceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCc-eecCCCCcccccCCCCCCccccCCCCCCC
Q 014776 216 -QSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPE-PLIPPAGARVMSLTDGLSKMSKSAPSDQS 293 (419)
Q Consensus 216 -~adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~-~l~~~~~~~l~sL~dg~~KMSKS~p~~~s 293 (419)
+++++.+|.||+.++..+|++.++++. +.+. .+.. |.+++. +| +|||||. +|
T Consensus 184 ~~~~~qiGGsDQ~gNi~~G~dli~~~~~------------------~~~~~~lT~---PLL~~~-~G-~K~~ks~---~n 237 (319)
T d2ts1a_ 184 EGCRLQIGGSDQWGNITAGLELIRKTKG------------------EARAFGLTI---PLVTKA-DG-TKFGKTE---SG 237 (319)
T ss_dssp HCEEEEEEEGGGHHHHHHHHHHHHHHHC--------------------CCEEEEE---CCCCCT-TS-CCTTCCS---SC
T ss_pred cCCchhhccchhhhHHHHHHHHHHHhcc------------------cccceEeec---cccccc-cc-ceeeecC---CC
Confidence 899999999999999999999998642 1122 3444 377887 77 6999996 68
Q ss_pred ceecCC---CHHHHHHHhhhccCCCCCCcccCCCCCCccchHHHHHHhcCCC---CHHHHHHHHh-cCCcchHHHHHHHH
Q 014776 294 RINLLD---PKDVIANKIKRCKTDSSAGLEFDNLERPECNNLLSIYQLISGK---TKGEVAEECQ-NMNWGTFKPLLTDA 366 (419)
Q Consensus 294 ~I~L~D---spe~I~~KI~kA~Td~~~~i~~~~~~rp~v~~ll~i~~~~~~~---~~eel~~~~~-~l~~~dlK~~La~~ 366 (419)
+|+|++ +|.++++|+++.. ...+..|+.+|++. +++++.+++. +-++.++|+.||+.
T Consensus 238 ~i~l~~~~tsp~~~yq~~~n~~----------------D~~v~~yl~~~T~~~~eeI~~i~~~~~~~~~~r~~K~~LA~e 301 (319)
T d2ts1a_ 238 TIWLDKEKTSPYEFYQFWINTD----------------DRDVIRYLKYFTFLSKEEIEALEQELREAPEKRAAQKTLAEE 301 (319)
T ss_dssp CCBSSTTTSCHHHHHHHHHTCC----------------HHHHHHHHHHHCCCCHHHHHHHHHHHHHCTTSCHHHHHHHHH
T ss_pred CcccccccCCHHHHHHHhcCCC----------------HHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 999986 6999999999875 13556777777665 4555666665 56899999999999
Q ss_pred HHHhhhHHH
Q 014776 367 LIEHLHPIQ 375 (419)
Q Consensus 367 I~~~L~pir 375 (419)
|+.+++.-.
T Consensus 302 it~l~HG~~ 310 (319)
T d2ts1a_ 302 VTKLVHGEE 310 (319)
T ss_dssp HHHHHHCHH
T ss_pred HHHHhCCHH
Confidence 999988753
No 8
>d1j09a2 c.26.1.1 (A:1-305) Glutamyl-tRNA synthetase (GluRS) {Thermus thermophilus [TaxId: 274]}
Probab=98.13 E-value=3.9e-05 Score=72.88 Aligned_cols=176 Identities=17% Similarity=0.157 Sum_probs=99.5
Q ss_pred CCCCcchhhhHHHHHHHHHHHhhcccEEEEEeCcceecCCCCHHHHHHHHHHHHHHHHHcCcCCCce-------EEEEcC
Q 014776 86 QPTGSIHLGNYLGAIKNWIALQNSYETLFFIVDLHAITLPYDTQQLSKATRETAAIYLACGIDNSKA-------SVFVQS 158 (419)
Q Consensus 86 ~PTG~lHLGnylg~ik~~~~lQ~~~~~~i~IaDlhA~t~~~~~~~i~~~~~~~~a~~lA~GlDp~k~-------~if~qS 158 (419)
.|||.+||||...++.+|..-+...--+++==|.+-.. ... .+....+.+++..+|+++|.. .++.||
T Consensus 9 sPtG~lHiG~~rtal~n~~~Ak~~~G~~iLRidDtD~~-R~~----~~~~~~I~~dL~wLgi~wD~~p~~~~~~~~~~qS 83 (305)
T d1j09a2 9 SPTGDPHVGTAYIALFNYAWARRNGGRFIVRIEDTDRA-RYV----PGAEERILAALKWLGLSYDEGPDVGGPHGPYRQS 83 (305)
T ss_dssp CCSSSCBHHHHHHHHHHHHHHHHTTCEEEECBCCCCTT-SCC----TTHHHHHHHHHHHTTCCCSBBTTTBCTTCCCBGG
T ss_pred CCCCcccHHHHHHHHHHHHHHHHcCCEEEEEeCcCCCc-cCc----hHHHHHHHHHHHHHhcCcccCCcCCCCCcceeee
Confidence 46799999999999988864433222233333333211 111 235557777888899998743 578999
Q ss_pred Ccc-hhhHHH-------HHHhccccHHHHhhhhh---------------HHHHHHhhCC-----------CC--------
Q 014776 159 HVR-AHVELM-------WLLSSATPIGWLNKMIQ---------------FKEKSHKAGG-----------EN-------- 196 (419)
Q Consensus 159 ~v~-~~~el~-------w~L~~~~~v~~l~r~~~---------------~k~~~~~~~~-----------~~-------- 196 (419)
+-. .+.+.. +.+.|.++-.++..... ..+.....+. +.
T Consensus 84 ~r~~~y~~~~~~Li~~g~aY~C~cs~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~k~~~~~~~~~~d~i~ 163 (305)
T d1j09a2 84 ERLPLYQKYAEELLKRGWAYRAFETPEELEQIRKEKGGYDGRARNIPPEEAEERARRGEPHVIRLKVPRPGTTEVKDELR 163 (305)
T ss_dssp GCHHHHHHHHHHHHHHTSEEEECCCHHHHHHHHHHHSSCCCGGGGSCHHHHHHHHHTTCCCEEEECCCSSCEEEEEETTT
T ss_pred cchhHHHHHHHHHHHcCCeeeccccchhhhhhhhhccCCCCccccchhhhHHHHhhcCCcceEEEeccccCCccccchhh
Confidence 942 232222 22447777766643210 0000000000 00
Q ss_pred -------ccchhh------hhhHHHHH---hhhhcccceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccc
Q 014776 197 -------VGVALL------TYPVLMAS---DILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIF 260 (419)
Q Consensus 197 -------~~~g~l------~YPvLQaA---Dil~~~adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f 260 (419)
..+|-+ .||..+=| |=...+.++|.-|.|-..+-..-+-+.+.++ +
T Consensus 164 ~~~~~~~~~~~D~vi~r~dg~p~Y~~A~vvDD~~~githviRG~Dl~~~t~~q~~l~~~Lg------------------~ 225 (305)
T d1j09a2 164 GVVVYDNQEIPDVVLLKSDGYPTYHLANVVDDHLMGVTDVIRAEEWLVSTPIHVLLYRAFG------------------W 225 (305)
T ss_dssp EEEEEEGGGSCCCEEECTTSCBCHHHHHHHHHHHTTCCEEEEEGGGGGGHHHHHHHHHHHT------------------C
T ss_pred ceeeeccccCCCeEEECCCCCeehHHHHHHHHHHccCccccccccceeccHHHHHHHHhhc------------------C
Confidence 001110 24444433 4446789999999998887766666766654 5
Q ss_pred cCCceecCCCCcccccCCCCCCccccCCC
Q 014776 261 KVPEPLIPPAGARVMSLTDGLSKMSKSAP 289 (419)
Q Consensus 261 ~~P~~l~~~~~~~l~sL~dg~~KMSKS~p 289 (419)
+.|...+.+ .+... +| +||||++.
T Consensus 226 ~~p~~~h~~---l~~~~-~g-~KLSKr~~ 249 (305)
T d1j09a2 226 EAPRFYHMP---LLRNP-DK-TKISKRKS 249 (305)
T ss_dssp CCCEEEEEC---CCBCT-TS-CBCCTTTS
T ss_pred CCCceeeec---ccccC-cc-ccccccCC
Confidence 667665544 45554 55 79999973
No 9
>d1nzja_ c.26.1.1 (A:) Glutamyl-Q tRNA-Asp synthetase YadB {Escherichia coli [TaxId: 562]}
Probab=98.09 E-value=1.5e-05 Score=75.22 Aligned_cols=174 Identities=16% Similarity=0.155 Sum_probs=92.9
Q ss_pred CCCCcchhhhHHHHHHHHHHHhhc-ccEEEEEeCcceecCCCCHHHHHHHHHHHHHHHHHcCcCCCceEEEEcCCc-chh
Q 014776 86 QPTGSIHLGNYLGAIKNWIALQNS-YETLFFIVDLHAITLPYDTQQLSKATRETAAIYLACGIDNSKASVFVQSHV-RAH 163 (419)
Q Consensus 86 ~PTG~lHLGnylg~ik~~~~lQ~~-~~~~i~IaDlhA~t~~~~~~~i~~~~~~~~a~~lA~GlDp~k~~if~qS~v-~~~ 163 (419)
.|||.+||||...++-+|..-... +++++=|=| .--. ....+....+..++..+|++.+. .++.||+- ..+
T Consensus 10 sPtG~lHiG~~rtal~n~~~Ak~~~G~~iLRieD-tD~~-----R~~~~~~~~I~~dL~wlgl~~d~-~~~~QS~r~~~Y 82 (286)
T d1nzja_ 10 SPSGELHFGSLIAALGSYLQARARQGRWLVRIED-IDPP-----REVPGAAETILRQLEHYGLHWDG-DVLWQSQRHDAY 82 (286)
T ss_dssp CTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEECC-SCGG-----GSCTTHHHHHHHHHHHTTCCCSS-CCEEGGGCHHHH
T ss_pred CCCCcccHHHHHHHHHHHHHHHHhCCEEEEEeCC-CCCC-----cCCHHHHHHHHHHHHHhhhcccc-ccchhHHHHHHH
Confidence 477999999999999999644333 344443333 2111 11124556777888899998874 47889984 334
Q ss_pred hHHHHH-------HhccccHHHHhhhhhHHHHHHh-hC--CC---------------------------Cccchhh----
Q 014776 164 VELMWL-------LSSATPIGWLNKMIQFKEKSHK-AG--GE---------------------------NVGVALL---- 202 (419)
Q Consensus 164 ~el~w~-------L~~~~~v~~l~r~~~~k~~~~~-~~--~~---------------------------~~~~g~l---- 202 (419)
.+..-. +.|.++-.+++........... .. .. ....+-+
T Consensus 83 ~~~~~~L~~~g~aY~C~ct~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~R 162 (286)
T d1nzja_ 83 REALAWLHEQGLSYYCTCTRARIQSIGGIYDGHCRVLHHGPDNAAVRIRQQHPVTQFTDQLRGIIHADEKLAREDFIIHR 162 (286)
T ss_dssp HHHHHHHHHTTCEEEECCCHHHHHHTTSSCCCTTTTTCCCSTTCEEEECCSSCCCEEEETTTEEEECCHHHHHSCCEEEC
T ss_pred HHHHHHHHHcCCcccccccHHHHHhhccccccccccccchhhhhhhhhcccccccceeeeeeeeeeeccccccccccccC
Confidence 333322 3477777666544221110000 00 00 0000100
Q ss_pred --hhhHHHHH---hhhhcccceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccC
Q 014776 203 --TYPVLMAS---DILLYQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSL 277 (419)
Q Consensus 203 --~YPvLQaA---Dil~~~adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL 277 (419)
.||..+=| |=...+.++|.-|.|....-..-..|.+.|+ ++.|+..+.+ +|...
T Consensus 163 ~dg~ptY~lA~vVDD~~~gIThViRG~D~l~st~~Q~~L~~~lg------------------~~~P~y~H~p---li~~~ 221 (286)
T d1nzja_ 163 RDGLFAYNLAVVVDDHFQGVTEIVRGADLIEPTVRQISLYQLFG------------------WKVPDYIHLP---LALNP 221 (286)
T ss_dssp TTSCBCHHHHHHHHHHHTTCCEEEEEGGGHHHHHHHHHHHHHHT------------------CCCCEEEEEC---BCCC-
T ss_pred CCCCeeeeehhhhcccccccceecccccccchHHHHHHHHHhhC------------------CCccceeecc---eEEcc
Confidence 13333333 3334689999999998887766666766654 6778877764 66665
Q ss_pred CCCCCccccCCC
Q 014776 278 TDGLSKMSKSAP 289 (419)
Q Consensus 278 ~dg~~KMSKS~p 289 (419)
+| +||||++.
T Consensus 222 -~g-~KLSKr~~ 231 (286)
T d1nzja_ 222 -QG-AKLSKQNH 231 (286)
T ss_dssp ------------
T ss_pred -CC-cccccccC
Confidence 56 69999973
No 10
>d1gtra2 c.26.1.1 (A:8-338) Glutaminyl-tRNA synthetase (GlnRS) {Escherichia coli [TaxId: 562]}
Probab=96.94 E-value=0.0021 Score=61.29 Aligned_cols=97 Identities=11% Similarity=-0.021 Sum_probs=58.5
Q ss_pred ceEEEecCC--CCcchhhhHHHHHHHHHHHhhcccEEEEEeCcceecCCCCHHHHHHHHHHHHHHHHHcCcCCCceEEEE
Q 014776 79 KRIVSGVQP--TGSIHLGNYLGAIKNWIALQNSYETLFFIVDLHAITLPYDTQQLSKATRETAAIYLACGIDNSKASVFV 156 (419)
Q Consensus 79 ~~i~tGi~P--TG~lHLGnylg~ik~~~~lQ~~~~~~i~IaDlhA~t~~~~~~~i~~~~~~~~a~~lA~GlDp~k~~if~ 156 (419)
..|.|=|.| ||.+||||...|+.+|.--....-.+|+==|..-.. ....+....+..++.-+||+.+. .++.
T Consensus 18 ~~v~tRFAPSPTG~LHiG~~rtal~n~l~Ak~~~G~fiLRIEDtD~~-----R~~~~~~~~I~~dL~WLGl~wD~-~~~~ 91 (331)
T d1gtra2 18 TTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYKGQCNLRFDDTNPV-----KEDIEYVESIKNDVEWLGFHWSG-NVRY 91 (331)
T ss_dssp SSCEEEECCCSSSCCBHHHHHHHHHHHHHHHHTTCEEEEEECCCCGG-----GCCHHHHHHHHHHHHHTTCCCSS-SCEE
T ss_pred CeEEEEeCCCCCCcccHHHHHHHHHHHHHHHHhCCEEEEEeCcCCCC-----cccchHHHHHHHHHHHHhccccc-ccee
Confidence 345555555 599999999999999965444333344433333211 22234556777888899999874 3567
Q ss_pred cCCcch-hhHHHHH-------HhccccHHHHhh
Q 014776 157 QSHVRA-HVELMWL-------LSSATPIGWLNK 181 (419)
Q Consensus 157 qS~v~~-~~el~w~-------L~~~~~v~~l~r 181 (419)
||+-.+ |.+.... +.|.++-.+++.
T Consensus 92 QS~r~~~Y~~~~~~L~~~G~aY~C~cs~eel~~ 124 (331)
T d1gtra2 92 SSDYFDQLHAYAIELINKGLAYVDELTPEQIRE 124 (331)
T ss_dssp GGGGHHHHHHHHHHHHHTTSEEEECCCHHHHHH
T ss_pred cchHHHHHHHHHHhhhhcCCcccccccHHHHHH
Confidence 998432 2221111 458888766653
No 11
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=93.85 E-value=0.076 Score=48.85 Aligned_cols=73 Identities=10% Similarity=-0.018 Sum_probs=47.2
Q ss_pred CceEE-EecCCCCcchhhhHHHHH--HHHHHHhhc--ccEE-EEEeCcceecC-------CCCH-HHHHHHHHHHHHHHH
Q 014776 78 KKRIV-SGVQPTGSIHLGNYLGAI--KNWIALQNS--YETL-FFIVDLHAITL-------PYDT-QQLSKATRETAAIYL 143 (419)
Q Consensus 78 ~~~i~-tGi~PTG~lHLGnylg~i--k~~~~lQ~~--~~~~-i~IaDlhA~t~-------~~~~-~~i~~~~~~~~a~~l 143 (419)
+++|| ||+-|+|.|||||..+++ .-|.++++. ++|+ ++-.|.|.--. ..++ +.+.+.......++.
T Consensus 22 ~~~~yv~Gptv~g~~HIGH~R~av~gD~laR~lr~~G~~V~~~~~~dd~G~~i~~~a~~~~~~~~e~~~~~~~~~~~~~~ 101 (315)
T d1li5a2 22 EVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVAMVDRMIAEMHKDFD 101 (315)
T ss_dssp EEEEEECCCBSSSCCBHHHHHHHHHHHHHHHHHHHHTCEEEEEECBBCCSHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred eEEEEecCCcCCCCcccchhHHHHHHHHHHHHHHHcCCcEEEEecccchhHHHHHHHhhhhhccccccccchhhhhhhHH
Confidence 34555 598888999999998877 336666664 6774 44567665421 1244 444455566777888
Q ss_pred HcCcCCC
Q 014776 144 ACGIDNS 150 (419)
Q Consensus 144 A~GlDp~ 150 (419)
+.++.+.
T Consensus 102 ~~~i~~~ 108 (315)
T d1li5a2 102 ALNILRP 108 (315)
T ss_dssp HTTCCCC
T ss_pred hcCCCCC
Confidence 8887543
No 12
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=93.55 E-value=0.15 Score=47.05 Aligned_cols=73 Identities=26% Similarity=0.406 Sum_probs=45.1
Q ss_pred CceEEEec-CCCCcchhhhHHHHHHH--HHHHhhc--ccEEEEE-eCccee--cC-----CCCH-HHHHHHHHHHHHHHH
Q 014776 78 KKRIVSGV-QPTGSIHLGNYLGAIKN--WIALQNS--YETLFFI-VDLHAI--TL-----PYDT-QQLSKATRETAAIYL 143 (419)
Q Consensus 78 ~~~i~tGi-~PTG~lHLGnylg~ik~--~~~lQ~~--~~~~i~I-aDlhA~--t~-----~~~~-~~i~~~~~~~~a~~l 143 (419)
+..|.+++ -|+|.+||||..+.+.. +.++++. ++|++.. .|.|.. .. ..++ +........+..++.
T Consensus 3 ~~~i~~~~P~~nG~lHiGHar~~v~~D~l~R~lr~~G~~V~~v~~~dd~g~ki~~~a~~~g~~~~~~~~~~~~~~~~~~~ 82 (350)
T d1pfva2 3 KILVTCALPYANGSIHLGHMLEHIQADVWVRYQRMRGHEVNFICADDAHGTPIMLKAQQLGITPEQMIGEMSQEHQTDFA 82 (350)
T ss_dssp EEEEEECCCBTTSCCBHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTSCHHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCCCCCCccccccHHHHHHHHHHHHHHhcCCceEecCccCCccHHHHHHHHHcCCCHHHHHHhHHHHHHHHHH
Confidence 34455555 56699999999886622 3444443 6775443 566542 11 2344 444566677888889
Q ss_pred HcCcCCC
Q 014776 144 ACGIDNS 150 (419)
Q Consensus 144 A~GlDp~ 150 (419)
++++|.+
T Consensus 83 ~l~i~~~ 89 (350)
T d1pfva2 83 GFNISYD 89 (350)
T ss_dssp HTTCCCS
T ss_pred HcCCCcc
Confidence 9999876
No 13
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=92.53 E-value=0.059 Score=47.74 Aligned_cols=45 Identities=24% Similarity=0.315 Sum_probs=29.9
Q ss_pred CceEEEecCCCCcchhhhHHHHHH--HHHHHhhc--ccEE-EEEeCccee
Q 014776 78 KKRIVSGVQPTGSIHLGNYLGAIK--NWIALQNS--YETL-FFIVDLHAI 122 (419)
Q Consensus 78 ~~~i~tGi~PTG~lHLGnylg~ik--~~~~lQ~~--~~~~-i~IaDlhA~ 122 (419)
+..+-+|+-|||.+||||.-+++. -+.++.+. ++|+ +...|.|..
T Consensus 19 ~~v~~~~~~PnG~lHIGHlr~~i~gD~laR~lr~~G~~V~~~~~~dd~g~ 68 (317)
T d1irxa2 19 KYVVESGITPSGYVHVGNFRELFTAYIVGHALRDKGYEVRHIHMWDDYDR 68 (317)
T ss_dssp EEEEEEEECCSSCCCHHHHHHHHHHHHHHHHHHTTTCEEEEEEEECTTSB
T ss_pred eEEEECCCCCCCCccccccHHHHHHHHHHHHHHHcCCCEEEEEEeccCcc
Confidence 456668999999999999877663 24555554 5663 444555443
No 14
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=91.37 E-value=0.17 Score=46.16 Aligned_cols=65 Identities=18% Similarity=0.192 Sum_probs=40.0
Q ss_pred CCCcchhhhHHHHHH--HHHHHhhc--ccEEEE-EeCcceec--C-----CCCH-HHHHHHHHHHHHHHHHcCcCCCc
Q 014776 87 PTGSIHLGNYLGAIK--NWIALQNS--YETLFF-IVDLHAIT--L-----PYDT-QQLSKATRETAAIYLACGIDNSK 151 (419)
Q Consensus 87 PTG~lHLGnylg~ik--~~~~lQ~~--~~~~i~-IaDlhA~t--~-----~~~~-~~i~~~~~~~~a~~lA~GlDp~k 151 (419)
|||.+||||..+.+. -+.++.+. ++|++. -.|.|..- . ..++ +.+..+...+...+.+.|++++.
T Consensus 14 pnG~lHiGH~r~~v~~D~l~R~lr~~G~~V~~v~g~D~~g~~i~~~a~~~g~~~~~~~~~~~~~~~~~~~~~~i~~~~ 91 (348)
T d2d5ba2 14 VNAEPHLGHAYTTVVADFLARWHRLDGYRTFFLTGTDEHGETVYRAAQAAGEDPKAFVDRVSGRFKRAWDLLGIAYDD 91 (348)
T ss_dssp TTSCCCHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECCSHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHTTCCCSE
T ss_pred CCCCcccccCHHHHHHHHHHHHHHhcCCCeEecCcCCCCCHHHHHHHHHcCCCHHHhhhhHHHHHHHHHHhcCccccc
Confidence 789999999877652 24445443 687544 45554210 0 1244 44556666777778888888764
No 15
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=89.85 E-value=0.24 Score=46.90 Aligned_cols=82 Identities=15% Similarity=0.110 Sum_probs=47.1
Q ss_pred CCceEEEe--cCCCCcchhhhHHHHHHH--HHHHhhc--ccEEEEE-eCcceecC----------CC-CH----------
Q 014776 77 VKKRIVSG--VQPTGSIHLGNYLGAIKN--WIALQNS--YETLFFI-VDLHAITL----------PY-DT---------- 128 (419)
Q Consensus 77 ~~~~i~tG--i~PTG~lHLGnylg~ik~--~~~lQ~~--~~~~i~I-aDlhA~t~----------~~-~~---------- 128 (419)
+++.+++. --|+|.|||||..+.+.. +.++++. ++|++.. .|-|.... ++ .+
T Consensus 33 ~~~f~i~~~pPy~NG~lHlGH~~~yv~~Dv~~Ry~r~~G~~V~~v~g~D~hG~~i~~~aek~~~~~~~~~~~~~~~~~~~ 112 (425)
T d1ivsa4 33 KPPFVIFMPPPNVTGSLHMGHALDNSLQDALIRYKRMRGFEAVWLPGTDHAGIATQVVVERLLLKEGKTRHDLGREKFLE 112 (425)
T ss_dssp SCEEEEECCCCBSSSCCCHHHHHHHHHHHHHHHHHHTTTSEEEEECEEBCCTHHHHHHHHHHHHTTTCCGGGSTTTHHHH
T ss_pred CCcEEEEcCCCCCCCCchhhHHHHHHHHHHHHHHHHhCCCceeecCcccCCcchHHHHHHHhhcccCCChHHhcHHHHHH
Confidence 34455555 356699999999887632 5666664 6775544 56665421 00 00
Q ss_pred ---HHHHHHHHHHHHHHHHcCcCCCceEEEEcC
Q 014776 129 ---QQLSKATRETAAIYLACGIDNSKASVFVQS 158 (419)
Q Consensus 129 ---~~i~~~~~~~~a~~lA~GlDp~k~~if~qS 158 (419)
....++...+...+.++|+..+....+.-+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~lg~~~d~~~~~~t~ 145 (425)
T d1ivsa4 113 RVWQWKEESGGTILKQLKRLGASADWSREAFTM 145 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCGGGCEETT
T ss_pred HHHHHHHHHHHHHHHHHHHhCCccCcchhhccc
Confidence 112234455667788889876654444433
No 16
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=87.50 E-value=0.12 Score=50.26 Aligned_cols=46 Identities=17% Similarity=0.255 Sum_probs=29.1
Q ss_pred CceEEEec-CCCCcchhhhHHHHHHH--HHHHhhc--ccEE-EEEeCcceec
Q 014776 78 KKRIVSGV-QPTGSIHLGNYLGAIKN--WIALQNS--YETL-FFIVDLHAIT 123 (419)
Q Consensus 78 ~~~i~tGi-~PTG~lHLGnylg~ik~--~~~lQ~~--~~~~-i~IaDlhA~t 123 (419)
++.+..|- -|+|.+||||.++.+.. +.+++.. ++|+ ++--|-|.+-
T Consensus 49 ~f~~~~~pPy~nG~lHiGH~~~~~~~Dv~~Ry~rm~G~~V~~~~G~D~~G~p 100 (450)
T d1ffya3 49 TFILHDGPPYANGNLHMGHALNKILKDFIVRYKTMQGFYAPYVPGWDTHGLP 100 (450)
T ss_dssp BCCEECCCCBSSSCCCHHHHHHHHHHHHHHHHHHTTTCBCCCCCEEBCCSHH
T ss_pred cEEEecCCCCCCCchhhhHHHHHHHHHHHHHHHHhcCCccccccccccCCcH
Confidence 45666665 34599999999886532 4455554 5664 4446777653
No 17
>d1ivsa4 c.26.1.1 (A:1-189,A:343-578) Valyl-tRNA synthetase (ValRS) {Thermus thermophilus [TaxId: 274]}
Probab=85.35 E-value=0.16 Score=48.11 Aligned_cols=69 Identities=23% Similarity=0.305 Sum_probs=37.9
Q ss_pred cceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCC-ceecCCCCcccccCCCCCCccccCCCCCCCce
Q 014776 217 SDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVP-EPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 295 (419)
Q Consensus 217 adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P-~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 295 (419)
.|+.++|.|+..++ ....+|.-... ++ ..| ..++.. .++... +| +|||||. +|.|
T Consensus 329 ~di~~~G~Di~~~h-~~~~~a~~~~~-~~---------------~~p~~~v~~h--g~~L~~-~G-~KMSKS~---Gn~I 384 (425)
T d1ivsa4 329 GDVLVTGYDILFLW-VSRMEVSGYHF-MG---------------ERPFKTVLLH--GLVLDE-KG-QKMSKSK---GNVI 384 (425)
T ss_dssp BSCEEEEGGGTTTT-HHHHHHHHHHH-SS---------------SCSBSEEEEE--CCEECT-TS-SBCBTTT---TBCC
T ss_pred ceEEEEEehhhhHH-HHHHHHHHHHh-cC---------------CCccceEEEc--ceEECC-CC-CCcCCCC---CCCc
Confidence 58899999986554 22233333221 22 223 222221 244444 56 6999997 7899
Q ss_pred ecCC-----CHHHHHHHhh
Q 014776 296 NLLD-----PKDVIANKIK 309 (419)
Q Consensus 296 ~L~D-----spe~I~~KI~ 309 (419)
.+.| +++.++=-+.
T Consensus 385 ~~~e~l~~~g~D~lR~~L~ 403 (425)
T d1ivsa4 385 DPLEMVERYGADALRFALI 403 (425)
T ss_dssp CHHHHHHHHCHHHHHHHHH
T ss_pred CHHHHHHHcCchHHHHHHH
Confidence 7755 4555554443
No 18
>d2d5ba2 c.26.1.1 (A:1-348) Methionyl-tRNA synthetase (MetRS) {Thermus thermophilus [TaxId: 274]}
Probab=85.12 E-value=0.32 Score=44.31 Aligned_cols=60 Identities=15% Similarity=0.081 Sum_probs=34.7
Q ss_pred ccceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCce
Q 014776 216 QSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRI 295 (419)
Q Consensus 216 ~adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I 295 (419)
..++.+.|.|+.......-... ... ++. .+.+..++.. .+-.+ +| +|||||. +|.|
T Consensus 251 ~~~~~~~g~d~~~~~~~~~~~~-~~~--~~~-------------~~~~~v~~~~---~~l~~-~G-~KMSKS~---Gn~i 306 (348)
T d2d5ba2 251 PHAWHLIGKDILKPHAVFWPTM-LKA--AGI-------------PMYRHLNVGG---FLLGP-DG-RKMSKTL---GNVV 306 (348)
T ss_dssp GGEEEEEEGGGHHHHHTHHHHH-HHH--HTC-------------CCCSEEEEEC---CEECT-TS-SCCCTTT---TCCC
T ss_pred chheeeehhhccchhhhhhhhh-ccc--ccc-------------CCCCEEEeCc---eEEcc-cC-CCCcCCC---Cccc
Confidence 4667788999888765543332 222 221 1223333332 44455 66 6999997 6888
Q ss_pred ecCC
Q 014776 296 NLLD 299 (419)
Q Consensus 296 ~L~D 299 (419)
.+.|
T Consensus 307 ~~~e 310 (348)
T d2d5ba2 307 DPFA 310 (348)
T ss_dssp CHHH
T ss_pred CHHH
Confidence 8755
No 19
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=84.22 E-value=0.33 Score=46.23 Aligned_cols=44 Identities=14% Similarity=0.067 Sum_probs=28.4
Q ss_pred ceEEE-ecCCCCcchhhhHHHHHH--HHHHHhhc--ccEE-EEEeCccee
Q 014776 79 KRIVS-GVQPTGSIHLGNYLGAIK--NWIALQNS--YETL-FFIVDLHAI 122 (419)
Q Consensus 79 ~~i~t-Gi~PTG~lHLGnylg~ik--~~~~lQ~~--~~~~-i~IaDlhA~ 122 (419)
+.|++ ---|+|.+||||..+.+. -+.++|+. ++|+ ++-.|-|..
T Consensus 40 f~i~~~pPy~nG~lHiGH~~~~v~~Dv~~Ry~r~~G~~V~~v~G~D~hG~ 89 (452)
T d1ilea3 40 YTVYEGPPTANGLPHVGHAQARSYKDLFPRYKTMRGYYAPRRAGWDTHGL 89 (452)
T ss_dssp CCBCCCCCCTTSCCCTTHHHHHHHHHHHHHHHHHTTCBCCCEEEECCCHH
T ss_pred EEEecCCCCCCCcchhhhHHHHHHHHHHHHHHHcCCCceeccCCcCCCCH
Confidence 44444 335779999999888662 25566664 6764 555777753
No 20
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]}
Probab=83.05 E-value=0.52 Score=45.27 Aligned_cols=73 Identities=16% Similarity=0.215 Sum_probs=45.7
Q ss_pred CceEEEec-CCCCcchhhhHHHHHHH--HHHHhhc--ccEEEEE-eCcceecC-------CCCH-HHHHHHHHHHHHHHH
Q 014776 78 KKRIVSGV-QPTGSIHLGNYLGAIKN--WIALQNS--YETLFFI-VDLHAITL-------PYDT-QQLSKATRETAAIYL 143 (419)
Q Consensus 78 ~~~i~tGi-~PTG~lHLGnylg~ik~--~~~lQ~~--~~~~i~I-aDlhA~t~-------~~~~-~~i~~~~~~~~a~~l 143 (419)
++.|.+|. -+||.+||||.++.+.+ ++++++. ++|++.- .|-|.+-. ...+ +-..+....+..++.
T Consensus 34 ~~~i~~~pP~~nG~lHiGH~~~~~~~D~~~R~~rm~G~~v~~~~G~D~~G~~~e~~~~k~~~~~~~~~~~~~~~~~~~~~ 113 (494)
T d1h3na3 34 KQYVLVMFPYPSGDLHMGHLKNYTMGDVLARFRRMQGYEVLHPMGWDAFGLPAENAALKFGVHPKDWTYANIRQAKESLR 113 (494)
T ss_dssp EEEEEECCCCSSSCCBHHHHHHHHHHHHHHHHHHHTTCEEECCCCBCCSSHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEEeCCCCCCCchhhhHHHHHHHHHHHHHHHHccCCcccCcCCcCcchHHHHHHHHHhCCChHHHHHHHHHHhHHHHH
Confidence 35666663 23599999999886522 5555554 5665444 66666632 1233 444566667778888
Q ss_pred HcCcCCC
Q 014776 144 ACGIDNS 150 (419)
Q Consensus 144 A~GlDp~ 150 (419)
.+|+..+
T Consensus 114 ~~g~~~d 120 (494)
T d1h3na3 114 LMGILYD 120 (494)
T ss_dssp HTTCCCC
T ss_pred hcCcccC
Confidence 8897554
No 21
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Probab=82.08 E-value=1.1 Score=40.79 Aligned_cols=65 Identities=17% Similarity=0.309 Sum_probs=35.6
Q ss_pred CCCCcchhhhHHHH-H--HHHHHHhhc--ccEEEEE-eCcce--ecC-----CCCHH-HHHHHHHHHHHHHHHcCcCCC
Q 014776 86 QPTGSIHLGNYLGA-I--KNWIALQNS--YETLFFI-VDLHA--ITL-----PYDTQ-QLSKATRETAAIYLACGIDNS 150 (419)
Q Consensus 86 ~PTG~lHLGnylg~-i--k~~~~lQ~~--~~~~i~I-aDlhA--~t~-----~~~~~-~i~~~~~~~~a~~lA~GlDp~ 150 (419)
-|||.+||||..+. + .-+.++++. ++|++.. .|.|. +.. ..+++ ....+......++.+.+++.+
T Consensus 12 ~p~G~lHiGH~~~~~i~~Dil~R~~r~~G~~V~~v~g~D~~g~~i~~~A~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (361)
T d1rqga2 12 YANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEGRSPREIVDEFHEQIKITFQRAKISFD 90 (361)
T ss_dssp BTTSCCBHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEEBCCSHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCCCS
T ss_pred CCCCCcccccccccHHHHHHHHHHHHhcCCceEecCccCcccHHHHHHHHHcCCCHHHHHHHHHHhhcccccccccccc
Confidence 47799999996553 3 223444443 6776554 44431 110 22443 334455566666777777644
No 22
>d1ilea3 c.26.1.1 (A:1-197,A:387-641) Isoleucyl-tRNA synthetase (IleRS) {Thermus thermophilus [TaxId: 274]}
Probab=76.82 E-value=0.51 Score=44.81 Aligned_cols=21 Identities=29% Similarity=0.376 Sum_probs=15.3
Q ss_pred ccccCCCCCCccccCCCCCCCceecC
Q 014776 273 RVMSLTDGLSKMSKSAPSDQSRINLL 298 (419)
Q Consensus 273 ~l~sL~dg~~KMSKS~p~~~s~I~L~ 298 (419)
.+..+ +| +|||||. +|.|.+.
T Consensus 394 ~iL~~-~G-~KMSKS~---gn~I~~~ 414 (452)
T d1ilea3 394 LILDE-KG-QKMSKSK---GNVVDPW 414 (452)
T ss_dssp CEECT-TS-SCCCTTT---TCCCCHH
T ss_pred EEECC-CC-cccCCCC---CCCcCHH
Confidence 55555 66 6999997 6888654
No 23
>d1irxa2 c.26.1.1 (A:3-319) Class I lysyl-tRNA synthetase {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=70.69 E-value=1 Score=39.12 Aligned_cols=25 Identities=28% Similarity=0.179 Sum_probs=10.1
Q ss_pred CccccCCCCCCCceecCC-----CHHHHHHHhh
Q 014776 282 SKMSKSAPSDQSRINLLD-----PKDVIANKIK 309 (419)
Q Consensus 282 ~KMSKS~p~~~s~I~L~D-----spe~I~~KI~ 309 (419)
.|||||. ++.|.+.| +++.++=-+.
T Consensus 276 ~KMSkrk---Gn~I~~~dll~~~~~d~~Ry~~l 305 (317)
T d1irxa2 276 GKMSGSK---GNVILLSDLYEVLEPGLVRFIYA 305 (317)
T ss_dssp -----------CCCCHHHHHTTSCHHHHHHHHH
T ss_pred ccccCCC---CccccHHHHHHHCCHHHHHHHhc
Confidence 5999997 68888765 4555544343
No 24
>d1pfva2 c.26.1.1 (A:4-140,A:176-388) Methionyl-tRNA synthetase (MetRS) {Escherichia coli [TaxId: 562]}
Probab=69.21 E-value=0.99 Score=41.18 Aligned_cols=17 Identities=41% Similarity=0.456 Sum_probs=13.3
Q ss_pred CCCCccccCCCCCCCceecCC
Q 014776 279 DGLSKMSKSAPSDQSRINLLD 299 (419)
Q Consensus 279 dg~~KMSKS~p~~~s~I~L~D 299 (419)
+| +|||||. +|.|.+.|
T Consensus 291 ~G-~KMSKS~---GN~i~~~d 307 (350)
T d1pfva2 291 NG-AKMSKSR---GTFIKAST 307 (350)
T ss_dssp TT-BSCCTTT---TCCCBHHH
T ss_pred CC-eEccCcC---CCCCCHHH
Confidence 56 6999997 78887644
No 25
>d1rqga2 c.26.1.1 (A:1-138,A:174-396) Methionyl-tRNA synthetase (MetRS) {Pyrococcus abyssi [TaxId: 29292]}
Probab=68.44 E-value=0.61 Score=42.50 Aligned_cols=17 Identities=29% Similarity=0.352 Sum_probs=13.3
Q ss_pred CCCCccccCCCCCCCceecCC
Q 014776 279 DGLSKMSKSAPSDQSRINLLD 299 (419)
Q Consensus 279 dg~~KMSKS~p~~~s~I~L~D 299 (419)
+| +|||||. +|.|.+.|
T Consensus 306 ~G-~KMSKSl---GN~I~~~d 322 (361)
T d1rqga2 306 EG-KKFSTSR---NWAIWVHE 322 (361)
T ss_dssp TT-EECBTTT---TBSCBHHH
T ss_pred CC-EecCCCC---CCCCCHHH
Confidence 56 7999997 68887644
No 26
>d1li5a2 c.26.1.1 (A:1-315) Cysteinyl-tRNA synthetase (CysRS) {Escherichia coli [TaxId: 562]}
Probab=68.11 E-value=1.6 Score=39.47 Aligned_cols=28 Identities=25% Similarity=0.250 Sum_probs=21.8
Q ss_pred CCCCccccCCCCCCCceecCC-----CHHHHHHHhhh
Q 014776 279 DGLSKMSKSAPSDQSRINLLD-----PKDVIANKIKR 310 (419)
Q Consensus 279 dg~~KMSKS~p~~~s~I~L~D-----spe~I~~KI~k 310 (419)
+| +|||||. +|.|.+.| .+|.++=-+.+
T Consensus 263 ~G-~KMSKs~---Gn~V~~~dlle~~g~D~lRy~lls 295 (315)
T d1li5a2 263 DR-EKMSKSL---GNFFTVRDVLKYYDAETVRYFLMS 295 (315)
T ss_dssp TT-BCCCGGG---TCCCBHHHHHTTSCHHHHHHHHHS
T ss_pred CC-cEecCcC---CCcccHHHHHHhCCHHHHHHHHHc
Confidence 56 5999997 78998877 77777766654
No 27
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=64.18 E-value=2.3 Score=39.40 Aligned_cols=76 Identities=12% Similarity=0.070 Sum_probs=50.0
Q ss_pred HHHhhhhc-------ccc--eecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCc-eecCCCCcccccC
Q 014776 208 MASDILLY-------QSD--FVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPE-PLIPPAGARVMSL 277 (419)
Q Consensus 208 QaADil~~-------~ad--ivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~-~l~~~~~~~l~sL 277 (419)
.+.||-+. ++| +-.+|.||..|+.-...+++.++.. ... ..+... |+
T Consensus 213 ~t~DiAy~~~K~~~~~~D~~I~V~g~dq~~~~~~l~~~l~~lg~~------------------~~~~~~h~~~-----g~ 269 (348)
T d1f7ua2 213 LTRDVGAAMDRYEKYHFDKMIYVIASQQDLHAAQFFEILKQMGFE------------------WAKDLQHVNF-----GM 269 (348)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEEECCGGGHHHHHHHHHHHHHTTCG------------------GGGGEEEECC-----CC
T ss_pred ecchHHhhhhhhhccCCCEEEEecccccchhhhhHHHHHHHhCCC------------------cccceeeecC-----Cc
Confidence 56677542 355 6689999999999999888886531 111 111111 22
Q ss_pred CCCCCccccCCCCCCCceecCCCHHHHHHHhhhcc
Q 014776 278 TDGLSKMSKSAPSDQSRINLLDPKDVIANKIKRCK 312 (419)
Q Consensus 278 ~dg~~KMSKS~p~~~s~I~L~Dspe~I~~KI~kA~ 312 (419)
. .||||.. ++.|.|.|==+++.++.+...
T Consensus 270 --v-~kMStR~---G~~i~l~dll~e~~~~a~~~~ 298 (348)
T d1f7ua2 270 --V-QGMSTRK---GTVVFLDNILEETKEKMHEVM 298 (348)
T ss_dssp --E-ESCCGGG---TCCCBHHHHHHHHHHHHHHHH
T ss_pred --c-ccccccC---CCceEHHHHHHHHHHHHHHHH
Confidence 1 5999997 789999886666666655443
No 28
>d1ffya3 c.26.1.1 (A:1-200,A:395-644) Isoleucyl-tRNA synthetase (IleRS) {Staphylococcus aureus [TaxId: 1280]}
Probab=62.39 E-value=1.2 Score=42.63 Aligned_cols=62 Identities=26% Similarity=0.243 Sum_probs=33.6
Q ss_pred cccceecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCc
Q 014776 215 YQSDFVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSR 294 (419)
Q Consensus 215 ~~adivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~ 294 (419)
+-+|+...|.||.... +.+-++..+- ..|. ..+..++.. .+|... +| +|||||. +|.
T Consensus 353 ~P~d~~~~G~Di~r~w-~~~~~~~~~~-~~~~--------------~Pfk~v~~h--G~vld~-~G-~KMSKS~---GN~ 409 (450)
T d1ffya3 353 FPADMYLEGSDQYRGW-FNSSITTSVA-TRGV--------------SPYKFLLSH--GFVMDG-EG-KKMSKSL---GNV 409 (450)
T ss_dssp SSBSEEEEEGGGGTTH-HHHHHHHHHH-HHSS--------------CSBSEEEEE--CCEECT-TS-CCCCSSS---SCC
T ss_pred CCCcccccCcchhhHH-HHHHHHHHHH-hcCC--------------CCcceEEEc--ceEECC-CC-CCCCCCC---CCC
Confidence 3478999999996311 2222222221 1231 222233322 255555 56 7999997 688
Q ss_pred eecCC
Q 014776 295 INLLD 299 (419)
Q Consensus 295 I~L~D 299 (419)
|...|
T Consensus 410 I~p~d 414 (450)
T d1ffya3 410 IVPDQ 414 (450)
T ss_dssp CCHHH
T ss_pred cCHHH
Confidence 87544
No 29
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=61.90 E-value=1.7 Score=40.60 Aligned_cols=68 Identities=16% Similarity=0.138 Sum_probs=39.8
Q ss_pred eecccCchHHHHHHHHHHHHHHhhhhCCccccccCCCCCccccCCceecCCCCcccccCCCCCCccccCCCCCCCceecC
Q 014776 219 FVPVGEDQKQHLELTRELAERVNYLYGGRKWKKLGGRGGAIFKVPEPLIPPAGARVMSLTDGLSKMSKSAPSDQSRINLL 298 (419)
Q Consensus 219 ivpvG~DQ~~h~eLaRdia~r~n~~~g~~~~~k~g~~~~~~f~~P~~l~~~~~~~l~sL~dg~~KMSKS~p~~~s~I~L~ 298 (419)
+--+|.+|..|+.+...+++.++..-- -..-.++.. .+|. + +| +||||.. ++.|.|.
T Consensus 254 iyVvd~~Q~~h~~~v~~~~~~~g~~~~--------------~~~~~hv~~---g~v~-~-~g-~kMStR~---G~~v~l~ 310 (370)
T d1iq0a2 254 INVVDVRQSHPQALVRAALALAGYPAL--------------AEKAHHLAY---ETVL-L-EG-RQMSGRK---GLAVSVD 310 (370)
T ss_dssp EEEEESSSCCCHHHHHHHHHHTTCHHH--------------HTTEEEEEE---CCEE-E-TT-BCSCC-------CCBHH
T ss_pred HHHHhccchHHHHHHHHHHHHhCCCch--------------hhceeeEEE---EEEe-c-CC-ccccccC---CCeeEHH
Confidence 557899999999999999998763100 001112221 1343 3 55 7999996 7899988
Q ss_pred CCHHHHHHHhh
Q 014776 299 DPKDVIANKIK 309 (419)
Q Consensus 299 Dspe~I~~KI~ 309 (419)
|==++..++.+
T Consensus 311 dll~ea~~~a~ 321 (370)
T d1iq0a2 311 EVLEEATRRAR 321 (370)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 75555444443
No 30
>d1f7ua2 c.26.1.1 (A:136-483) Arginyl-tRNA synthetase (ArgRS) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=57.86 E-value=2.6 Score=38.98 Aligned_cols=39 Identities=18% Similarity=0.234 Sum_probs=26.9
Q ss_pred EEecCCCCcchhhhHHHHH--HHHHHHhhc--ccE--EEEEeCcc
Q 014776 82 VSGVQPTGSIHLGNYLGAI--KNWIALQNS--YET--LFFIVDLH 120 (419)
Q Consensus 82 ~tGi~PTG~lHLGnylg~i--k~~~~lQ~~--~~~--~i~IaDlh 120 (419)
|+.--|||.||+||.-+++ .-+.++-+. ++| -+.|.||=
T Consensus 14 ~~SaNpt~plHvGH~R~aiiGd~larlL~~~G~~V~re~yvnD~G 58 (348)
T d1f7ua2 14 FSSPNIAKPFHAGHLRSTIIGGFLANLYEKLGWEVIRMNYLGDWG 58 (348)
T ss_dssp CCCCBTTSCCBGGGHHHHHHHHHHHHHHHHTTCEEEEEEEEBCCS
T ss_pred ecCCCCCCCcchhhhhhHHHHHHHHHHHHHCCCeEEEEEEECCch
Confidence 6788899999999987765 234444443 565 46777753
No 31
>d1iq0a2 c.26.1.1 (A:97-466) Arginyl-tRNA synthetase (ArgRS) {Thermus thermophilus [TaxId: 274]}
Probab=57.82 E-value=1.1 Score=41.95 Aligned_cols=38 Identities=21% Similarity=0.304 Sum_probs=27.1
Q ss_pred EEecCCCCcchhhhHHHHH--HHHHHHhhc--ccE--EEEEeCc
Q 014776 82 VSGVQPTGSIHLGNYLGAI--KNWIALQNS--YET--LFFIVDL 119 (419)
Q Consensus 82 ~tGi~PTG~lHLGnylg~i--k~~~~lQ~~--~~~--~i~IaDl 119 (419)
|+.--|||.||+||.-+++ ..+.++-+. ++| ...|.||
T Consensus 13 f~SpN~~kplHvGHlRs~iiGd~laril~~~G~~V~r~nyigD~ 56 (370)
T d1iq0a2 13 HTSVNPNKELHVGHLRNIALGDAIARILAYAGREVLVLNYIDDT 56 (370)
T ss_dssp CCCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTEEEEEEEEECTT
T ss_pred ecCCCCCCCcchhhhhhHHHHHHHHHHHHHcCCEEEEEEeECCc
Confidence 7899999999999987765 334444443 455 4668886
No 32
>d1h3na3 c.26.1.1 (A:1-225,A:418-686) Leucyl-tRNA synthetase (LeuRS) {Thermus thermophilus [TaxId: 274]}
Probab=31.52 E-value=8.1 Score=36.29 Aligned_cols=27 Identities=11% Similarity=-0.077 Sum_probs=19.2
Q ss_pred ccceecccCchHHHHHHHHHHHHHHhh
Q 014776 216 QSDFVPVGEDQKQHLELTRELAERVNY 242 (419)
Q Consensus 216 ~adivpvG~DQ~~h~eLaRdia~r~n~ 242 (419)
..|.++.|.++.......+.+-..+..
T Consensus 339 ~vd~~~~~~~~~~~~~~~~~~~~~~~~ 365 (494)
T d1h3na3 339 PVDQYIGGVEHAVLHLLYSRFFTKFLH 365 (494)
T ss_dssp SBSEEECCGGGTTTHHHHHHHHHHHHH
T ss_pred Cceecccccceeeeeeecccchhhhhh
Confidence 467888888888777777776655443
Done!