Query 014784
Match_columns 418
No_of_seqs 235 out of 2028
Neff 6.4
Searched_HMMs 29240
Date Mon Mar 25 17:46:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014784.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014784hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hyo_A Fumarylacetoacetate hyd 100.0 9.5E-89 3.2E-93 697.2 31.7 413 3-417 2-418 (421)
2 3lzk_A Fumarylacetoacetate hyd 100.0 7.6E-65 2.6E-69 510.6 23.9 318 20-417 22-357 (359)
3 3r6o_A 2-hydroxyhepta-2,4-dien 100.0 2.1E-56 7E-61 444.0 24.0 289 19-417 21-322 (329)
4 4dbf_A 2-hydroxyhepta-2,4-dien 100.0 1.8E-53 6.1E-58 416.6 17.5 214 109-416 64-288 (288)
5 3rr6_A Putative uncharacterize 100.0 3.4E-52 1.2E-56 403.6 16.3 209 109-416 48-263 (265)
6 2dfu_A Probable 2-hydroxyhepta 100.0 1.8E-49 6E-54 385.2 21.1 213 110-417 32-260 (264)
7 1wzo_A HPCE; structural genomi 100.0 3.2E-49 1.1E-53 380.0 21.7 209 112-416 30-245 (246)
8 3l53_A Putative fumarylacetoac 100.0 4.3E-49 1.5E-53 374.0 17.7 187 115-359 3-199 (224)
9 3s52_A Putative fumarylacetoac 100.0 1.4E-48 4.9E-53 369.8 17.7 207 111-414 7-221 (221)
10 2q18_X 2-keto-3-deoxy-D-arabin 100.0 1.5E-47 5.1E-52 377.0 15.2 274 20-417 1-290 (293)
11 1saw_A Hypothetical protein FL 100.0 2.7E-45 9.4E-50 348.2 16.9 191 134-416 28-223 (225)
12 1gtt_A 4-hydroxyphenylacetate 100.0 1.5E-45 5E-50 380.3 16.3 210 110-416 208-425 (429)
13 1nkq_A Hypothetical 28.8 kDa p 100.0 2.1E-43 7.1E-48 341.6 15.7 203 121-413 4-243 (259)
14 1gtt_A 4-hydroxyphenylacetate 100.0 1.2E-41 4.1E-46 351.1 18.1 184 134-375 12-199 (429)
15 2eb4_A 2-OXO-HEPT-3-ENE-1,7-di 100.0 1.4E-35 4.7E-40 288.2 8.4 187 134-414 66-267 (267)
16 2wqt_A 2-keto-4-pentenoate hyd 100.0 3.7E-34 1.3E-38 278.6 14.3 189 130-416 62-263 (270)
17 2k52_A Uncharacterized protein 69.3 4.3 0.00015 31.0 3.7 64 340-406 1-68 (80)
18 3l53_A Putative fumarylacetoac 46.2 13 0.00044 34.3 3.3 13 383-395 197-209 (224)
19 2khj_A 30S ribosomal protein S 44.5 21 0.00071 28.7 4.0 64 340-406 27-98 (109)
20 2k4k_A GSP13, general stress p 43.2 15 0.00051 30.7 3.0 63 341-406 4-74 (130)
21 3i4o_A Translation initiation 36.7 37 0.0013 26.2 4.0 30 362-396 36-65 (79)
22 1tyg_B YJBS; alpha beta barrel 34.7 42 0.0015 26.2 4.2 21 314-335 26-46 (87)
23 2k5p_A THis protein, thiamine- 32.0 30 0.001 26.3 2.9 20 314-335 6-27 (78)
24 2k9x_A Tburm1, uncharacterized 27.0 40 0.0014 27.5 3.0 62 325-393 34-95 (110)
25 2dgy_A MGC11102 protein; EIF-1 26.7 69 0.0023 26.3 4.3 15 381-395 50-64 (111)
26 1kl9_A Eukaryotic translation 25.9 34 0.0012 30.4 2.5 63 342-407 13-85 (182)
27 3esi_A Uncharacterized protein 24.2 73 0.0025 26.7 4.1 26 382-407 75-100 (129)
28 3gt2_A Putative uncharacterize 21.5 47 0.0016 28.0 2.4 37 341-394 89-125 (142)
29 2qcp_X Cation efflux system pr 20.9 64 0.0022 24.7 2.9 17 382-398 51-67 (80)
30 2vb2_X Copper protein, cation 20.6 64 0.0022 25.2 2.9 17 382-398 59-75 (88)
31 1s4k_A Putative cytoplasmic pr 20.4 40 0.0014 28.1 1.7 25 219-248 16-40 (120)
No 1
>1hyo_A Fumarylacetoacetate hydrolase; beta-sandwich roll; HET: HBU; 1.30A {Mus musculus} SCOP: b.34.8.1 d.177.1.1 PDB: 1qcn_A 2hzy_A* 1qco_A 1qqj_A
Probab=100.00 E-value=9.5e-89 Score=697.24 Aligned_cols=413 Identities=57% Similarity=1.052 Sum_probs=359.7
Q ss_pred cccccccCCCCCCCCCCCCeEEEeeCCCCCceeEEEECCeEEechhhhhcCCCCCCC-ccCCCccCcccHHHHHhCCchh
Q 014784 3 LQSFIEVEPDSHFPIQNLPYGVFKPEPASVARPGVAIGEYVLDLSEISKAGLFNGPI-LKDSDCFLQPNLNKFLSLGRPA 81 (418)
Q Consensus 3 ~~s~~~~~~~~~f~~~~~~~~~~~~~~~~~~r~Gv~~~~~vvdL~~~~~~~~~~~~~-~~~~~~~~~~~l~~fl~~g~~~ 81 (418)
.+|||+++.+|+|+|+|||||+|++.+++.+|+|+++|++|+||+++.. .+..+. ....++|.+++|++||++|...
T Consensus 2 ~~s~~~~~~~~~f~~~nlp~g~f~~~~~~~~r~Gv~igd~v~DL~~~~~--~~~~~~~~~~~~~~~~~tL~~~l~~g~~~ 79 (421)
T 1hyo_A 2 SMSFIPVAEDSDFPIQNLPYGVFSTQSNPKPRIGVAIGDQILDLSVIKH--LFTGPALSKHQHVFDETTLNNFMGLGQAA 79 (421)
T ss_dssp -CCSSCCCTTCSCCTTTCCEEEEECSSCCSCEEEEEETTEEEETTTTGG--GCCSTTTTTCGGGGGSSSSHHHHHHCHHH
T ss_pred CcccccCCCCCCCCccCceEEEEEeCCCCceEEEEEeCCEEEeHHHhHh--hcccccccccccccCCcCHHHHHhcChHH
Confidence 4899999999999999999999998777889999999999999987754 222110 0123456778999999999989
Q ss_pred HHHHHHHHHHHHhccchhhhhhhhhccccceecCCceEcCCcccCCcceeeccHHHHHHhccccCCCCCCCCCCCCCCCe
Q 014784 82 WKEARDMLQKLLSSNEATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPI 161 (418)
Q Consensus 82 ~~~~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~v~ll~Pv~~~~~~~~~~~~~H~~e~g~~~~~~~~~~~p~~~~~P~ 161 (418)
|.++|+.++++++.....++++..+.....+++++|+|++|+.+++|+|||+|++|++|+++.|++++++.+|+|++.|+
T Consensus 80 ~~~~r~~l~~~~~~~~~~l~~~~~~~~~~~~~~~~v~ll~P~~~~~y~df~~~~~Ha~~~g~~~r~~~~~~~p~~~~~Pv 159 (421)
T 1hyo_A 80 WKEARASLQNLLSASQARLRDDKELRQRAFTSQASATMHLPATIGDYTDFYSSRQHATNVGIMFRGKENALLPNWLHLPV 159 (421)
T ss_dssp HHHHHHHHHHHHTTSSTHHHHCHHHHHHHEEESTTCEEECSSCCSCEEEECCCHHHHHHHHHHHHCGGGCSCTTTTTSCC
T ss_pred HHHHHHHHHHHhhccCccccccccccccccccHhHCeEcCCcccCcEEEEechHHHHHHHHhhhccccccCCCCcCCCCE
Confidence 99999999987764433233332222345689999999999999999999999999999998777666667899999999
Q ss_pred eeecCCcccccCCCeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchh
Q 014784 162 AYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSAR 241 (418)
Q Consensus 162 ~f~k~~ssivg~g~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaR 241 (418)
+|+|++++++++|++|.+|.++.++.....|.+.+++++|||+||||||||++++|++|++++|++||+|||++||||+|
T Consensus 160 ~f~k~~ssvv~~g~~I~~P~~~~~~~~~~~p~~~~s~~lD~E~ELavvIG~~~~~g~~v~~~~A~~~I~Gy~l~ND~SaR 239 (421)
T 1hyo_A 160 GYHGRASSIVVSGTPIRRPMGQMRPDNSKPPVYGACRLLDMELEMAFFVGPGNRFGEPIPISKAHEHIFGMVLMNDWSAR 239 (421)
T ss_dssp EEECCSTTEEETTCCEECCEEEECSCTTSCCEEEECSCEECBEEEEEEECSCCCTTCCCCHHHHGGGEEEEEEEECCEEH
T ss_pred EEEcccceEEcCCCeEECCCCcccCccccccccccccCceEEEEEEEEECcccccCCCCCHHHHHHhhcEEEEEEeccHH
Confidence 99999999999999999998765433333466667899999999999999997778999999999999999999999999
Q ss_pred hHhhhhhCCCCCccccccCCCCCCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEec
Q 014784 242 DIQAWEYVPLGPFLGKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRS 321 (418)
Q Consensus 242 D~Q~~~~~~l~~~~~Ksfdt~lGPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~ 321 (418)
|+|.|++.+++|++||+|+|+|||||||+|++++++...|..++..++||.+.+++.++|+|++++|++++.+|+++|++
T Consensus 240 diQ~~e~~plg~~~aK~f~t~iGPwivt~d~l~p~~~~~~~~~~~~l~~l~~~~~~~~~l~l~~~vN~~~~~~Ge~~q~~ 319 (421)
T 1hyo_A 240 DIQQWEYVPLGPFLGKSFGTTISPWVVPMDALMPFVVPNPKQDPKPLPYLCHSQPYTFDINLSVSLKGEGMSQAATICRS 319 (421)
T ss_dssp HHHHHHCTTTCCCHHHHTCEEECSCBEEHHHHGGGEECCCCCSSCCCGGGCCCSCCEECCEEEEEEECTTCSSCEEEEEE
T ss_pred hhhhhhcccCCCccccCcCCCCCCeecchhhcccccccccccCCcccccccccCCCccceEEEEEEecCCCCCCEEEEec
Confidence 99999998999999999999999999999999999988888999999999988777777777777665444459999999
Q ss_pred CCC--CCCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCC-CCccCCCCCEEEEEEEEe
Q 014784 322 NFK--YWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGF-TRKFLEDGDEVTFTGFCK 398 (418)
Q Consensus 322 ~t~--~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~-~~~~L~~GD~V~~~~~~~ 398 (418)
+++ +|+++|||+|++|++|+|+|||||+||||+|+++.+.||++|++++|++++++..+ +++|||+||+|++++.+.
T Consensus 320 ~~~~m~~~~~~lIa~lss~g~tL~pGDlI~TGTpsG~~~~~~G~~lE~~~~G~~~v~l~~g~~~~fL~~GD~V~~~~~~~ 399 (421)
T 1hyo_A 320 NFKHMYWTMLQQLTHHSVNGCNLRPGDLLASGTISGSDPESFGSMLELSWKGTKAIDVGQGQTRTFLLDGDEVIITGHCQ 399 (421)
T ss_dssp ETTCCSSCHHHHHHHHHTTSCCCCTTCEEECCCCCCSSGGGCCBHHHHTTTTTSCEECSTTCEESSCCTTCEEEEEEEEE
T ss_pred CHHhhcCCHHHHHHHHHHCCCccCCCCEEEcCCCCCCCCCCCcceEEEEecCcceeeccCCCCCccCCCCCEEEEEEEEC
Confidence 988 99999999998679999999999999999999999999999999999999999877 889999999999999887
Q ss_pred cCCceEeeeeeeeEEeeCC
Q 014784 399 GNGYTVGFGTCSGKIVPST 417 (418)
Q Consensus 399 ~~~~~~~~G~~~~~v~~~~ 417 (418)
++|.+||||+|+|+|+|+.
T Consensus 400 ~~g~~igfG~~~~~V~~a~ 418 (421)
T 1hyo_A 400 GDGYRVGFGQCAGKVLPAL 418 (421)
T ss_dssp CSSCEEEEEEEEEEEECCC
T ss_pred CCCceeeeeeeEEEEecCC
Confidence 8999999999999999985
No 2
>3lzk_A Fumarylacetoacetate hydrolase family protein; structural genomics, PSI-2, protein structure initiative; 1.90A {Sinorhizobium meliloti}
Probab=100.00 E-value=7.6e-65 Score=510.55 Aligned_cols=318 Identities=20% Similarity=0.226 Sum_probs=249.5
Q ss_pred CCeEEEeeCCCCCceeEEEECC--eEEechhhhhcCCCCCCCccCCCccCcccHHHHHhCCchhHHHHHHHHHHHHhccc
Q 014784 20 LPYGVFKPEPASVARPGVAIGE--YVLDLSEISKAGLFNGPILKDSDCFLQPNLNKFLSLGRPAWKEARDMLQKLLSSNE 97 (418)
Q Consensus 20 ~~~~~~~~~~~~~~r~Gv~~~~--~vvdL~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~g~~~~~~~r~~l~~~~~~~~ 97 (418)
|.|.+|... +...+++++.+| .++++..+ +++|++||+.+ ++++..++.+.+.-.
T Consensus 22 MKlat~~~~-~~~g~l~vvs~Dl~~~~~~~~~------------------~~~l~~~l~~w----~~~~~~l~~l~~~l~ 78 (359)
T 3lzk_A 22 MKLATLKDS-TRDGKLVVVSKDLTRCSEVGHI------------------ARTLQAALDDW----AHAGPRLERVAEGIE 78 (359)
T ss_dssp CEEEEECCS-SSSCEEEEECTTSSEEEECTTT------------------CSSHHHHHHTH----HHHHHHHHHHHHHHH
T ss_pred ceEEEEecC-CcccEEEEEeCccccccccccc------------------CcCHHHHHhcc----HhhHHHHHHHHHHHh
Confidence 789999763 234577777653 34443321 26999999975 444444443322100
Q ss_pred hhhhhhhhhccccceecCCceEcCCcccC-CcceeeccHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCe
Q 014784 98 ATLRDNANLRQKSLVPMGKVEMLLPMEIG-DYTDFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTD 176 (418)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~v~ll~Pv~~~-~~~~~~~~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~ 176 (418)
......+++++++|++|++++ .|.++.+|.+|++|+++.+ + +++|++|++.|++|+|+++++++++++
T Consensus 79 --------~~~~~~~~~~~v~ll~Pv~~~~~~~~g~NY~~Ha~e~~~~~-g--~~~p~~~~~~P~~F~k~~ssv~g~~~~ 147 (359)
T 3lzk_A 79 --------TGAQPTMRFHEHDAASPLPRAFQWADGSAYVNHVELVRKAR-N--AEMPASFWTDPLIYQGGSDSFLGPRDP 147 (359)
T ss_dssp --------HTCSCCEECCGGGBCCSSSSCSCEEEECCCHHHHHHHHHHT-T--CCCCGGGGTSCCEEEECCSSCBCTTSC
T ss_pred --------cCCCCCCcCccceEcCCCCCCCEEEEEcCHHHHHHHHHHhc-C--CCCCCcccCccEEEECCCceEECCCCC
Confidence 012234689999999999865 4666677999999997653 2 346778889999999999999999999
Q ss_pred eeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhC-CCCCcc
Q 014784 177 IVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFL 255 (418)
Q Consensus 177 I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~-~l~~~~ 255 (418)
|.+|.. ++++|||+||||||||. |++|++++|++||+|||++||||+||+|.+++. +++|++
T Consensus 148 I~~P~~--------------s~~lD~E~ELavVIGk~---~~~v~~e~A~~~I~Gytl~ND~SaRD~Q~~~~~~g~~~~~ 210 (359)
T 3lzk_A 148 ILMADD--------------AWGIDMEGEAAVIVDDV---PMGATLDEAKAAIRLVMLVNDVSLRGLIPGELAKGFGFYQ 210 (359)
T ss_dssp EEESCT--------------TSCEECCEEEEEEECCB---CTTCCHHHHHHTEEEEEEEECCEETTTHHHHHHHTSCCST
T ss_pred EECCCC--------------CCCeeEEEEEEEEECCC---CCCCCHHHHHhhhcEEEEEEeccHHHhhhhhhccCCCccc
Confidence 999875 78999999999999998 999999999999999999999999999999875 489999
Q ss_pred ccccCCCCCCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecC-CC--CCCHHHHH
Q 014784 256 GKSFGTTLSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSN-FK--YWTLTQQL 332 (418)
Q Consensus 256 ~Ksfdt~lGPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~-t~--~~~~~~lI 332 (418)
||+| +++||||||+|||++++.. ...++.|+++| ||+++|++| ++ +|+++|||
T Consensus 211 ~K~~-~~~gP~iVt~del~~~~~~---------------~~~~L~l~~~v--------NGe~~q~~~~t~~Mif~~~~lI 266 (359)
T 3lzk_A 211 SKPS-SAFSPVAVTPEELGEAWDG---------------GKLHLPLHVDL--------NGEPFGRANAGIDMTFDFPQLI 266 (359)
T ss_dssp TSCC-CEECSCEECHHHHGGGBCS---------------SCBCSBEEEEE--------TTEEEECCBTTSSCSSCHHHHH
T ss_pred cccc-cccCCccccHHHcCccccC---------------CccceEEEEEE--------CCEEEEcCcCcccccCCHHHHH
Confidence 9996 6799999999999875421 12467888888 999999999 87 99999999
Q ss_pred HHHHhcceecCCCCEEEcCCCCCCcCC-----------CCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCC
Q 014784 333 AHHTINGCNLRSGDLLGTGTISGPEPE-----------SLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNG 401 (418)
Q Consensus 333 a~~~S~~~tL~pGDvI~TGTp~Gvg~~-----------~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~ 401 (418)
+|+ |+++||+|||||+||||+|+..- ..||++|.. +.+++.....+++|||+||+|+++ +.+.+
T Consensus 267 a~l-S~~~tL~pGDvI~TGTpsGv~~~~~~~~~~~~~~G~~~l~E~~--~~~~~~~g~~~~~fL~~GD~V~i~--~~~~~ 341 (359)
T 3lzk_A 267 VHA-ARTRPLSAGTIIGSGTVSNKLEGGPGRPVSEGGAGYSCIAELR--MIETIEGGAPKTQFLKFGDVVRIE--MKDRT 341 (359)
T ss_dssp HHH-TTTSCBCTTEEEECCSCCCCBTTBCCCCGGGTSCBCSSHHHHH--HHHHHHHSSCCSCCBCTTCEEEEE--EBCTT
T ss_pred HHH-hCCCCcCCCCEEEcCCcCCCCcccccccccccccccccchhhh--hhhhhccCCCCCCcCCCCCEEEEE--EEcCC
Confidence 997 99999999999999999999432 257888863 233333222245799999999998 55444
Q ss_pred ceEeeeeeeeEEeeCC
Q 014784 402 YTVGFGTCSGKIVPST 417 (418)
Q Consensus 402 ~~~~~G~~~~~v~~~~ 417 (418)
++|+||+|+|+|+++.
T Consensus 342 g~~~~G~l~n~V~~~~ 357 (359)
T 3lzk_A 342 GHSIFGAIEQKVGKYE 357 (359)
T ss_dssp SCBSSCCEEEEEEECC
T ss_pred CcccccceEEEEEeCC
Confidence 5789999999999974
No 3
>3r6o_A 2-hydroxyhepta-2,4-diene-1, 7-dioateisomerase; ssgcid, struc genomics, seattle structural genomics center for infectious isomerase; 1.95A {Mycobacterium abscessus}
Probab=100.00 E-value=2.1e-56 Score=444.00 Aligned_cols=289 Identities=20% Similarity=0.287 Sum_probs=214.3
Q ss_pred CCCeEEEeeCCCCCceeEEE-ECCeEEechhhhhcCCCCCCCccCCCccCcccHHHHHhCCchhHHHHHHHHHHHHhccc
Q 014784 19 NLPYGVFKPEPASVARPGVA-IGEYVLDLSEISKAGLFNGPILKDSDCFLQPNLNKFLSLGRPAWKEARDMLQKLLSSNE 97 (418)
Q Consensus 19 ~~~~~~~~~~~~~~~r~Gv~-~~~~vvdL~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~g~~~~~~~r~~l~~~~~~~~ 97 (418)
+|-|.+++....++.|.|++ .++.++||+.+....-. .. .....+++. ++.++..+++.++..
T Consensus 21 ~m~~~l~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~--------~~---~~~~~l~~~----ld~~~~~l~~~l~~~- 84 (329)
T 3r6o_A 21 SMNLRIVSFAGADQWQPGVLIDDDTVAPLAPMLARHDI--------QV---SSARELIAL----LPQISPLISDELAGG- 84 (329)
T ss_dssp -CCCEEEEBC----CCEEEEEETTEEEECSCC--------------------CHHHHHTT----HHHHHHHHHHTC----
T ss_pred ceeEEEEEEccCCCccceEEecCCEEEEchhhhccccc--------cc---cchhhHHHH----HHHHHHHHHHHHhcC-
Confidence 44455555555566777876 48899999876542100 01 123444443 334444444322211
Q ss_pred hhhhhhhhhccccceecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCC
Q 014784 98 ATLRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISG 174 (418)
Q Consensus 98 ~~~~~~~~~~~~~~~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g 174 (418)
....+++++++|++|++++. .++|. |.+|++ +|.. .|. .+.|++|+|+++++++++
T Consensus 85 ----------~~~~~~~~~v~llaPv~~p~-kI~cvG~NY~~H~~-~g~~--------~P~-~~~P~~F~K~~~s~~g~~ 143 (329)
T 3r6o_A 85 ----------SFEPVPLDSVALGAPIPEPG-QVIALGFNYPTHSD-TDSP--------LPK-MADPVVFMKSPTSISGPR 143 (329)
T ss_dssp --------------CBGGGSCBCCSSSSCS-CEEEEESCSTTC---------------------CCEEEEECGGGEECTT
T ss_pred ----------CCCCccCccceEcCCCCCCC-eEEEEcccHHHHHH-hCCC--------CCC-ccCCEEEEcccceEECCC
Confidence 23458999999999999774 34554 788998 5532 222 148999999999999999
Q ss_pred CeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhh---hhC--
Q 014784 175 TDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAW---EYV-- 249 (418)
Q Consensus 175 ~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~---~~~-- 249 (418)
++|.+|.. +.++|||+||||||||. +++|++++|++||+|||++||||+||+|.. .+.
T Consensus 144 ~~I~~P~~--------------~~~~d~E~ELavVIGk~---~~~v~~e~A~~~I~Gytv~NDvSaRd~q~~~g~~~~~~ 206 (329)
T 3r6o_A 144 DAVIAPRT--------------SHALDYEIEIAVVIGKP---GYRIERSQAIKHVAGYMLANDITARDVALPFGFGGSPL 206 (329)
T ss_dssp CCEEECTT--------------CSCEECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHCTTC------
T ss_pred CceECCCC--------------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhccccccc
Confidence 99999875 78999999999999999 999999999999999999999999999873 222
Q ss_pred CCCCccccccCCC--CCCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--C
Q 014784 250 PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--Y 325 (418)
Q Consensus 250 ~l~~~~~Ksfdt~--lGPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~ 325 (418)
..+|++||+|||+ +|||+||+||+.+ +.++.|+++| ||+++|+++++ +
T Consensus 207 ~~~w~~aK~fd~~~plGP~ivt~del~d--------------------~~~l~l~l~v--------NGe~~q~g~t~dMi 258 (329)
T 3r6o_A 207 QAQVVRGKGYPTFCPTGPWLFTTGSDTT--------------------FETFDFELRI--------NGELRQSGSTVDMT 258 (329)
T ss_dssp CCCHHHHHCSTTSEEBCSCEEECTTCSS--------------------CCCCEEEEEE--------TTEEEEEEEGGGCS
T ss_pred CCccccccCcCcCcccCCeEcChhhcCC--------------------hhhcEEEEEE--------CCEEEEecCHHHhc
Confidence 3579999999997 9999999999965 3568899988 99999999998 9
Q ss_pred CCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEe
Q 014784 326 WTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVG 405 (418)
Q Consensus 326 ~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~ 405 (418)
|++++||+|+ |+++||+|||||+||||+|+|.. +. +++||++||+|+++ |+ |
T Consensus 259 f~~~~lIa~l-S~~~tL~pGDvI~TGTp~GvG~~------------~~-------p~~~l~~GD~V~~e--i~------g 310 (329)
T 3r6o_A 259 LGFAEVVETV-SATIALRAGDIILTGTPGGCGFQ------------FD-------PPRYLRPGDVIEAH--SA------K 310 (329)
T ss_dssp SCHHHHHHHH-HTTSCBCTTCEEECCCCSCCGGG------------SS-------SCCCCCTTCEEEEE--ET------T
T ss_pred CCHHHHHHHH-HcCCCcCCCCEEEcCCccccCCC------------CC-------CCccCCCCCEEEEE--Ec------C
Confidence 9999999997 99999999999999999999742 12 56899999999998 66 8
Q ss_pred eeeeeeEEeeCC
Q 014784 406 FGTCSGKIVPST 417 (418)
Q Consensus 406 ~G~~~~~v~~~~ 417 (418)
||+|+|+|+.+.
T Consensus 311 lG~l~n~V~~~~ 322 (329)
T 3r6o_A 311 LGKMRLPVHDEK 322 (329)
T ss_dssp TEEEEEEEEECC
T ss_pred ceEEEEEEEeCC
Confidence 999999998764
No 4
>4dbf_A 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; oxaloacetate decarboxylase; 1.90A {Corynebacterium glutamicum} PDB: 4dbh_A
Probab=100.00 E-value=1.8e-53 Score=416.55 Aligned_cols=214 Identities=23% Similarity=0.277 Sum_probs=181.4
Q ss_pred ccceecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcC
Q 014784 109 KSLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFA 185 (418)
Q Consensus 109 ~~~~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~ 185 (418)
+..+++++++|++|+.+. ..+|. |.+|++|++.. .+. +++|++|+|+++++++++++|.+|..
T Consensus 64 g~~~~~~~v~ll~Pv~p~--ki~cvG~NY~~H~~E~~~~-----~~~----p~~P~~F~K~~~sv~g~~~~I~~P~~--- 129 (288)
T 4dbf_A 64 GREWPLKDVRLLAPMLPS--KVVAIGRNYADHVAEVFKK-----SAE----SLPPTLFLKPPTAVTGPESPIRIPSF--- 129 (288)
T ss_dssp EEEEEGGGSEEECSCCCS--CEEEEESCBCC--------------------CCCCEEEEECGGGEECTTCCEEECTT---
T ss_pred CceeecccCeEcCCCCCc--eEEEEeccHHHHHHHhccC-----CCC----CCCCEEEEeCcceeeCCCCceECCCC---
Confidence 356899999999999853 24554 78999999831 011 26799999999999999999999875
Q ss_pred CCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhCCCCCccccccCCC--C
Q 014784 186 PSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--L 263 (418)
Q Consensus 186 ~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~~l~~~~~Ksfdt~--l 263 (418)
++++|||+||||||||+ |++|++++|++||+|||++||||+||+|.++. +|+++|+|||+ |
T Consensus 130 -----------~~~~d~E~ELavVIGk~---~~~v~~~~A~~~I~Gytv~nDvsaRd~Q~~~~---~w~~aK~fd~~~pl 192 (288)
T 4dbf_A 130 -----------ATKVEFEGELAVVIGKP---CKNVKADDWKSVVLGFTIINDVSSRDLQFADG---QWARAKGIDTFGPI 192 (288)
T ss_dssp -----------CCSEECCEEEEEEECSC---BSSCCGGGGGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEE
T ss_pred -----------CCceeEEEEEEEEECCC---cCCCCHHHHhhheeEEEEEEEeEhHHhhhccC---CccccccCCCCcee
Confidence 78999999999999999 99999999999999999999999999998764 89999999997 9
Q ss_pred CCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCc----EEEEecCCC--CCCHHHHHHHHHh
Q 014784 264 SPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDS----CVVTRSNFK--YWTLTQQLAHHTI 337 (418)
Q Consensus 264 GPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng----~~~q~~~t~--~~~~~~lIa~~~S 337 (418)
||||+|..++.+ +.++.|+++| || +++|+++++ +|++++||+|+ |
T Consensus 193 GP~ivt~~~~~d--------------------~~~l~i~~~v--------NG~~~~e~~Q~~~t~~mi~~~~~lIa~l-S 243 (288)
T 4dbf_A 193 GPWIETDINSID--------------------LDNLPIKARL--------THDGETQLKQDSNSNQMIMKMGEIIEFI-T 243 (288)
T ss_dssp EEEEECCGGGSC--------------------TTSCEEEEEE--------EETTEEEEEEEEEGGGBSSCHHHHHHHH-H
T ss_pred CCccccccccCC--------------------ccccEEEEEE--------cCCcceEEEEecCHHHhcCCHHHHHHHH-h
Confidence 999999754433 3568899988 78 999999998 99999999997 9
Q ss_pred cceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEeeC
Q 014784 338 NGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 416 (418)
Q Consensus 338 ~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 416 (418)
+++||+|||||+||||+|++ +|++||+|+++ |+ |+|+|+|+|+.|
T Consensus 244 ~~~tL~pGDvI~TGTP~Gvg--------------------------~l~~GD~v~v~--ie------giG~L~n~v~~~ 288 (288)
T 4dbf_A 244 ASMTLLPGDVIATGSPAGTE--------------------------AMVDGDYIEIE--IP------GIGKLGNPVVDA 288 (288)
T ss_dssp TTSCBCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEEEC
T ss_pred CCCCcCCCCEEEcCCCCCCe--------------------------ecCCCCEEEEE--EC------CcEEEEEEEEeC
Confidence 99999999999999999975 57999999998 67 999999999876
No 5
>3rr6_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.58A {Mycobacterium abscessus} PDB: 3qdf_A
Probab=100.00 E-value=3.4e-52 Score=403.55 Aligned_cols=209 Identities=30% Similarity=0.363 Sum_probs=185.9
Q ss_pred ccceecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcC
Q 014784 109 KSLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFA 185 (418)
Q Consensus 109 ~~~~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~ 185 (418)
+..+++++++|++|+.+. ..+|. |.+|++|+|.. . +++|++|+|+++++++++++|.+|..
T Consensus 48 ~~~~~~~~v~ll~P~~p~--ki~cvG~NY~~h~~e~g~~--------~---P~~P~~F~K~~~s~~g~~~~I~~P~~--- 111 (265)
T 3rr6_A 48 GRQWPLADVRLLAPILAS--KVVAMGKNYAAHAAEMGGD--------P---PESPVIFIKPNTSIIGPGLPIQLPPS--- 111 (265)
T ss_dssp EEEEEGGGSEECCSSCCS--CEEEESCCBCSSGGGTTSS--------C---CCCCCEEEECGGGEECTTSCEECCTT---
T ss_pred CcEeecccCeEcCCCCCc--eEEEEEcCHHHHHHHhCCC--------C---CCCCEEEEeCcceEeCCCCceECCCC---
Confidence 456899999999999853 24554 78899999753 1 25799999999999999999999875
Q ss_pred CCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhCCCCCccccccCCC--C
Q 014784 186 PSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--L 263 (418)
Q Consensus 186 ~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~~l~~~~~Ksfdt~--l 263 (418)
++++|||+||||||||+ +++|++++|++||+|||++||||+||+|.++. +|.++|+|||+ +
T Consensus 112 -----------~~~~d~E~ELavVIGk~---~~~v~~~~A~~~V~Gyt~~nDvsaRd~q~~~~---~w~~aK~fd~~~pl 174 (265)
T 3rr6_A 112 -----------ATEVHHEGELAIVIGRP---CKDVPAARAAENILGYTIGNDVSARDHQRADG---QWTRAKGHDTFCPL 174 (265)
T ss_dssp -----------CSCEEECEEEEEEECSC---BSSCCGGGTGGGEEEEEEEECCEEHHHHHHHS---SSHHHHHSTTCEEE
T ss_pred -----------CCceeEEEEEEEEECCc---CCCCCHHHHHhheeEEEEEEEeEhHHhhhccC---CcceecccCCCccc
Confidence 78999999999999999 99999999999999999999999999998763 89999999997 9
Q ss_pred CCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhccee
Q 014784 264 SPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCN 341 (418)
Q Consensus 264 GPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~t 341 (418)
||||+|. ++ +.++.|+++| ||+++|+++++ +|+++++|+|+ |+++|
T Consensus 175 GP~ivt~--~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lIa~l-S~~~t 222 (265)
T 3rr6_A 175 GPWIVTD--LD---------------------PADLEIRTEV--------NGQVRQRSRTSLLLHDVGAIVEWV-SAVMT 222 (265)
T ss_dssp EEEEESS--CC---------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSC
T ss_pred CCcCcCC--CC---------------------cccCEEEEEE--------CCEEEEEECHHhhcCCHHHHHHHH-hcCCC
Confidence 9999983 43 3568899998 99999999998 99999999997 99999
Q ss_pred cCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEeeC
Q 014784 342 LRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 416 (418)
Q Consensus 342 L~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 416 (418)
|+|||||+||||+|++ +|++||+|+++ |+ |+|+|+|+|+.+
T Consensus 223 L~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~v~--i~------giG~l~n~v~~~ 263 (265)
T 3rr6_A 223 LLPGDVILTGTPEGVG--------------------------PIVDGDTVSVT--IE------GIGTLSNPVVRK 263 (265)
T ss_dssp BCTTCEEECCCCSCCE--------------------------ECCTTCEEEEE--ET------TTEEEEEEEECC
T ss_pred cCCCCEEEeCCCCCce--------------------------eCCCCCEEEEE--EC------CcEEEEEEEEeC
Confidence 9999999999999974 57999999988 67 999999999875
No 6
>2dfu_A Probable 2-hydroxyhepta-2,4-diene-1,7-dioate ISOM; 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase, structural GE NPPSFA; 2.20A {Thermus thermophilus}
Probab=100.00 E-value=1.8e-49 Score=385.23 Aligned_cols=213 Identities=23% Similarity=0.290 Sum_probs=175.7
Q ss_pred cceecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCC---------Cee
Q 014784 110 SLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISG---------TDI 177 (418)
Q Consensus 110 ~~~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g---------~~I 177 (418)
..+++++++|++|+.+.+ .+|. |.+|++|++..+. .+. ++.|++|+|+++++++++ ++|
T Consensus 32 ~~~~~~~~~ll~P~~p~~--i~~~g~Ny~~H~~e~~~~~~---~~~----p~~P~~f~k~~~s~~~~~~~~rp~g~~~~i 102 (264)
T 2dfu_A 32 RRYDLASVTLLPPATPTK--IVCVGRNYREHIREMGHDFG---EDL----PKEPGLFLKGPNALARPGNPRDPWGTAEPV 102 (264)
T ss_dssp EEEEGGGSCEECSCCCSC--EEEECSCBC----------------C----CSSCCEEEECGGGEECCCBTTBHHHHSCCE
T ss_pred CccccccCeEcCCccCCe--EEEEeCcHHHHHHHhccccc---CCC----CCCCEEEEeccceEEccCCcccccCCCcce
Confidence 357899999999996443 4444 7899999985421 122 246999999999999999 778
Q ss_pred eCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhCCCCCcccc
Q 014784 178 VRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGK 257 (418)
Q Consensus 178 ~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~~l~~~~~K 257 (418)
.+|.. ++++|||+|||+||||+ ++++++++|++||+||+++||||+||+|.++ .+|.++|
T Consensus 103 ~~p~~--------------~~~~d~E~ELavvig~~---~~~v~~~~a~~~I~gy~~~nDvt~Rd~q~~~---~~~~~aK 162 (264)
T 2dfu_A 103 PYPFF--------------TEELHYEGELAVVVGDR---MRHVPPEKALDHVLGYTVAVDITARDVQKKD---LQWVRAK 162 (264)
T ss_dssp EECSS--------------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEHHHHHHS---SSSHHHH
T ss_pred ecCCC--------------CCceeEEEEEEEEECCC---CCCCCHHHHHHHhhEeEEEEEeEhhhhhhcc---CCCceee
Confidence 77753 67899999999999999 9999999999999999999999999999875 4899999
Q ss_pred ccCCC--CCCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHH
Q 014784 258 SFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLA 333 (418)
Q Consensus 258 sfdt~--lGPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa 333 (418)
+|||+ +|||++| +++ +.++.|+++| ||+++|+++++ +|+++++|+
T Consensus 163 ~~d~~~plGp~i~~--~~d---------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia 211 (264)
T 2dfu_A 163 SADKFLPLGPWLET--DLN---------------------PQDTWVRTYV--------NGTLRQEGHTSQMIFSVAEILS 211 (264)
T ss_dssp CSTTCEEEEEEEES--SCC---------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHH
T ss_pred cCCCCEEECCcCcc--ccC---------------------CCccEEEEEE--------CCEEEEEecHHHhhcCHHHHHH
Confidence 99995 9999998 453 2568899988 99999999988 999999999
Q ss_pred HHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEE
Q 014784 334 HHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKI 413 (418)
Q Consensus 334 ~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v 413 (418)
|+ |+++||+|||||+||||+|++ +|++||+|+++ ++ |+|+++|+|
T Consensus 212 ~l-s~~~tL~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v 256 (264)
T 2dfu_A 212 YI-STFMTLEPLDVVLTGTPEGVG--------------------------ALRPGDRLEVA--VE------GVGTLFTLI 256 (264)
T ss_dssp HH-HTTSCBCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEE
T ss_pred HH-hcCCCcCCCCEEEeCCCCCcc--------------------------ccCCCCEEEEE--Ee------CcEEEEEEE
Confidence 97 899999999999999999974 57999999998 66 899999999
Q ss_pred eeCC
Q 014784 414 VPST 417 (418)
Q Consensus 414 ~~~~ 417 (418)
+++.
T Consensus 257 ~~~~ 260 (264)
T 2dfu_A 257 GPKE 260 (264)
T ss_dssp EEEC
T ss_pred EecC
Confidence 8754
No 7
>1wzo_A HPCE; structural genomics, riken structural genomics/proteom initiative, RSGI, NPPSFA, isomerase; 1.90A {Thermus thermophilus}
Probab=100.00 E-value=3.2e-49 Score=379.96 Aligned_cols=209 Identities=22% Similarity=0.314 Sum_probs=176.0
Q ss_pred eecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCCC
Q 014784 112 VPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSG 188 (418)
Q Consensus 112 ~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~~ 188 (418)
+++++++|++|+ .+. +.+|. |++|++|+|.. .| +.|++|+|+++++++++++|.+|..
T Consensus 30 ~~~~~~~~l~P~-~p~-~i~~vG~ny~~h~~e~g~~--------~P---~~P~~f~k~~~~~~~~g~~i~~p~~------ 90 (246)
T 1wzo_A 30 HRPEDVTWLLPF-TPG-KILGVALNYADHAEELGLS--------RP---EEPALFWKPNTSLLPHKGVVLYPKG------ 90 (246)
T ss_dssp ECGGGSEECCSS-CCC-CEEEEESCBC------CCC--------CC---SSCEEEEECGGGEECTTCCEEECTT------
T ss_pred cccccCEEcCCC-CCC-eEEEEEcChHHHHHHhCCC--------CC---CCCEEEEECcccEeCCCCeEECCCC------
Confidence 578899999999 443 34554 67899999742 12 4699999999999999999999875
Q ss_pred CCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhCCCCCccccccCCC--CCCc
Q 014784 189 NSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPW 266 (418)
Q Consensus 189 ~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~~l~~~~~Ksfdt~--lGPw 266 (418)
+..+|||+||||||||+ ++++++++|++||+||+++||+|+||+|...+ .+|.++|+||++ +|||
T Consensus 91 --------~~~~~~E~ELavvig~~---~~~v~~~~a~~~i~g~~~~nD~s~rd~q~~~~--~~~~~~K~~d~~~~lGp~ 157 (246)
T 1wzo_A 91 --------ARFVHYEVELAVVVGRP---MKRVRAKDALDYVLGYTIANDLVARDYVTNTF--RPPIRAKGRDTFLPLGPF 157 (246)
T ss_dssp --------CSCEECCEEEEEEECSC---BSSCCHHHHGGGEEEEEEEECCEEGGGC------CCCHHHHCSTTCEEEEEE
T ss_pred --------CCceeEEEEEEEEECCC---CCCCCHHHHHhheeEEEEEEECchHHhccccc--CCceeeccCCCCEEECCc
Confidence 67899999999999999 99999999999999999999999999998764 589999999995 9999
Q ss_pred cccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhcceecCC
Q 014784 267 IVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCNLRS 344 (418)
Q Consensus 267 ivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~tL~p 344 (418)
++ .|++.+ +.++.|+++| ||+++|+++++ +|++.++|+|+ |+++||+|
T Consensus 158 i~-~~~i~d--------------------~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~lia~l-s~~~tL~p 207 (246)
T 1wzo_A 158 LV-VEEVED--------------------PQDLWLRAYV--------NGELRQEGHTSRMLYSVAELLEFI-SEFMTLEP 207 (246)
T ss_dssp EE-CSCCSC--------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCT
T ss_pred Cc-HHHcCC--------------------CcccEEEEEE--------CCEEEEeeCHHHhCCCHHHHHHHH-hCCCCcCC
Confidence 99 888854 3568889988 99999999988 99999999997 99999999
Q ss_pred CCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEeeC
Q 014784 345 GDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 416 (418)
Q Consensus 345 GDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 416 (418)
||||+||||+|++ +|++||+|+++ ++ |||+++|+|+.+
T Consensus 208 GDvI~TGTp~gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~~~ 245 (246)
T 1wzo_A 208 YDVLLTGTPKGIS--------------------------QVRPGDVMRLE--IE------GLGALENPIEEE 245 (246)
T ss_dssp TCEEECCCCCCSC--------------------------EECTTCEEEEE--ET------TSCEEEEEEEEC
T ss_pred CCEEEeCCCCCce--------------------------ECCCCCEEEEE--Ec------CcEEEEEEEEeC
Confidence 9999999999974 47999999998 66 899999999865
No 8
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=100.00 E-value=4.3e-49 Score=374.00 Aligned_cols=187 Identities=22% Similarity=0.215 Sum_probs=163.7
Q ss_pred CCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCCCCCC
Q 014784 115 GKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSP 191 (418)
Q Consensus 115 ~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~~~~~ 191 (418)
+.|+|++|++.+--..+|. |.+|++|+|.. . +++|++|+|+++++++++++|.+|..
T Consensus 3 ~~~~~~~P~p~~~~ki~cvG~Ny~~h~~e~g~~--------~---p~~P~~F~K~~~s~~~~g~~I~~P~~--------- 62 (224)
T 3l53_A 3 ELILNQRPYPRDLGKIVCVGRNYAAHAKELNNP--------I---PSSPILFIKPASSAVPFGPVFSIPKD--------- 62 (224)
T ss_dssp CCEETTEECSSCCCEEEEEECCSHHHHHHTTCC--------C---CSSCEEEEEEGGGEEESCSEECCCSS---------
T ss_pred ccceecCCCCCCCCeEEEEccCHHHHHHHhCCC--------C---CCCCEEEecCCceEECCCCeEecCCC---------
Confidence 5789999998653234444 88999999753 1 26799999999999999999999875
Q ss_pred CCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhC-CCCCccccccCCC--CCCccc
Q 014784 192 PPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIV 268 (418)
Q Consensus 192 p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~-~l~~~~~Ksfdt~--lGPwiv 268 (418)
+.++|||+||||||||+ +++++++||++||+|||++||||+||+|.+++. +++|.++|+|||+ +||| +
T Consensus 63 -----~~~~d~E~ELavvIgk~---~~~i~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~g~~w~~aK~fd~~~plGp~-v 133 (224)
T 3l53_A 63 -----QGSVHHELEIAILIGKA---LSRASTEQVAESIAGIGLGLDLTLRDVQDQLKEKGHPWERAKSFDGACPLTEF-V 133 (224)
T ss_dssp -----SSCEEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHTTCCSHHHHSSTTSEEECCB-B
T ss_pred -----CCCcceEEEEEEEECCC---CCCCCHHHHHhhccEEEEEEEeEhHHhhhhhhhcCCCcceeeccCCCcccCCc-E
Confidence 68999999999999999 999999999999999999999999999998764 5789999999996 9997 5
Q ss_pred ccc--ccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhcceecCC
Q 014784 269 TLD--ALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCNLRS 344 (418)
Q Consensus 269 t~d--el~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~tL~p 344 (418)
+.| ++.+ +.++.++++| ||+++|+++++ +|+++++|+|+ |+++||+|
T Consensus 134 ~~~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL~p 184 (224)
T 3l53_A 134 AVNLASEDE--------------------WQAIGLTLEK--------NGQFQQQGSSAEMLFPILPLIAHM-SEHFSLQP 184 (224)
T ss_dssp CCCCSSGGG--------------------GGGEEEEEEE--------TTEEEEEEEGGGCSSCHHHHHHHH-HHHSCBCT
T ss_pred eCchhhcCC--------------------hhccEEEEEE--------CCEEEEEEcHHHhcCCHHHHHHHH-HCCCCcCC
Confidence 777 7754 3578899988 99999999998 99999999997 99999999
Q ss_pred CCEEEcCCCCCCcCC
Q 014784 345 GDLLGTGTISGPEPE 359 (418)
Q Consensus 345 GDvI~TGTp~Gvg~~ 359 (418)
||||+||||+|++++
T Consensus 185 GDvI~TGTp~Gvg~l 199 (224)
T 3l53_A 185 GDVILTGTPAGVGPL 199 (224)
T ss_dssp TCEEECCCCSCCEEC
T ss_pred CCEEEcCCCCCCEEc
Confidence 999999999998644
No 9
>3s52_A Putative fumarylacetoacetate hydrolase family Pro; csgid, structural genomics, center for structural genomics O infectious diseases; 2.01A {Yersinia pestis} SCOP: d.177.1.1 PDB: 1nr9_A
Probab=100.00 E-value=1.4e-48 Score=369.84 Aligned_cols=207 Identities=18% Similarity=0.221 Sum_probs=178.0
Q ss_pred ceecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCC
Q 014784 111 LVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPS 187 (418)
Q Consensus 111 ~~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~ 187 (418)
.+++..-.+..|+. +.+|. |.+|++|+|.. . ++.|++|+|+++++++++++|.+|..
T Consensus 7 ~~~~~~~~~~~p~~----ki~~vG~Ny~~h~~e~g~~--------~---p~~P~~F~K~~~~~~~~g~~i~~p~~----- 66 (221)
T 3s52_A 7 HRDWQGALLDFPVN----KVVCVGSNYAEHIKEMGST--------A---SVEPVLFIKPETALCDIRQPVSIPKD----- 66 (221)
T ss_dssp CBBTTSCBCCSCCC----EEEEEESCBHHHHHHTTCC--------C---CSSCEEEEEEGGGEEETTSCBCCCSS-----
T ss_pred EEeeCCCcccCCCC----cEEEEeCCHHHHHHHhCCC--------C---CCceEEEEcCCceEeCCCCeEECCCC-----
Confidence 35666655555543 24444 78999999753 1 25799999999999999999999875
Q ss_pred CCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhC-CCCCccccccCCC--CC
Q 014784 188 GNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LS 264 (418)
Q Consensus 188 ~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~-~l~~~~~Ksfdt~--lG 264 (418)
++++|||+||||||||+ +++++++||++||+|||++||||+||+|.+.+. +++|.++|+||++ +|
T Consensus 67 ---------~~~~d~E~ELavvig~~---~~~v~~~~A~~~I~Gy~~~nDvs~Rd~q~~~~~~~~~~~~aK~~d~~~plG 134 (221)
T 3s52_A 67 ---------FGSVHHEIELAVLIGTP---LKQASEDRVARAIAGYGVALDLTLRELQAGFKKAGQPWEKAKAFDGSCPIS 134 (221)
T ss_dssp ---------SSCEEECEEEEEEECSC---BSSCCHHHHHHHEEEEEEEECCEEHHHHHHHHHHTCCSHHHHSSTTCEEEC
T ss_pred ---------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEeEHHHHhhhhhccCCCcceeecCCCCcccc
Confidence 67999999999999999 999999999999999999999999999997653 5789999999997 99
Q ss_pred CccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhcceec
Q 014784 265 PWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCNL 342 (418)
Q Consensus 265 Pwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~tL 342 (418)
||+ +.+++++ +.++.++++| ||+++|+++++ +|+++++|+|+ |+++||
T Consensus 135 p~i-~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~t~~mi~~~~~lia~l-S~~~tL 184 (221)
T 3s52_A 135 GFI-PVAEFGD--------------------AQQADLSLTI--------NGEIRQQGNTRDMITPIIPLISYM-SRFFTL 184 (221)
T ss_dssp CBE-EHHHHCC--------------------GGGCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HHHSCB
T ss_pred Cce-ehhhcCC--------------------ccceEEEEEE--------CCEEEEEEcHHHccCCHHHHHHHH-hCCCCc
Confidence 998 5677754 3568899988 99999999998 99999999997 999999
Q ss_pred CCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEe
Q 014784 343 RSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 414 (418)
Q Consensus 343 ~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~ 414 (418)
+|||||+||||+|++ .|++||+|+++ ++ |+| ++|+|+
T Consensus 185 ~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~------glG-l~~~v~ 221 (221)
T 3s52_A 185 RAGDIVLTGTPQGVG--------------------------PMQSGDMLKIM--LN------GKT-VNTRII 221 (221)
T ss_dssp CTTCEEECCCCSCCE--------------------------EECTTCEEEEE--ET------TEE-EEEEBC
T ss_pred CCCCEEEeCCCCcce--------------------------ecCCCCEEEEE--Ee------CeE-EEEEEC
Confidence 999999999999975 36999999887 66 899 999885
No 10
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=100.00 E-value=1.5e-47 Score=377.04 Aligned_cols=274 Identities=20% Similarity=0.199 Sum_probs=200.2
Q ss_pred CCeEEEeeCCCCCceeEEEECCeEEechhhhhcCCCCCCCccCCCccCcccHHHHHhCCchhHHHHHHHHHHHHhccchh
Q 014784 20 LPYGVFKPEPASVARPGVAIGEYVLDLSEISKAGLFNGPILKDSDCFLQPNLNKFLSLGRPAWKEARDMLQKLLSSNEAT 99 (418)
Q Consensus 20 ~~~~~~~~~~~~~~r~Gv~~~~~vvdL~~~~~~~~~~~~~~~~~~~~~~~~l~~fl~~g~~~~~~~r~~l~~~~~~~~~~ 99 (418)
|+|.+|... ++..|+|++.++.++||+........ ..++|.++|+.+...++ ++..
T Consensus 1 Mkl~~~~~~-~g~~~~gvv~~~~v~~l~~~~~~~~~-----------~~~~l~~~l~~~~~~~~-~~~~----------- 56 (293)
T 2q18_X 1 MKLFRVVKR-GYYISYAILDNSTIIRLDEDPIKALM-----------RYSENKEVLGDRVTGID-YQSL----------- 56 (293)
T ss_dssp CEEEEEEET-TEEEEEEECTTSCEEEESSCHHHHHH-----------HHHHHCCCCEEEESSCC-HHHH-----------
T ss_pred CEEEEEEeC-CCCEEEEEEECCEEEECccccccccc-----------cCcCHHHHHhCChhhhh-Hhhc-----------
Confidence 678899763 35689999999999999752100000 02466666665432211 1110
Q ss_pred hhhhhhhccccceecCCceEcCCcccCCcceeec---cHH----HHHHhccccCCCCCCCCCC--CCCCCeeeecC-Ccc
Q 014784 100 LRDNANLRQKSLVPMGKVEMLLPMEIGDYTDFFS---SMH----HAKNCGTIFRGPANAVPAN--WFHLPIAYHGR-ASS 169 (418)
Q Consensus 100 ~~~~~~~~~~~~~~l~~v~ll~Pv~~~~~~~~~~---~~~----H~~e~g~~~~~~~~~~~p~--~~~~P~~f~k~-~ss 169 (418)
...+++++++|++|+.+++ .+|+ |.+ |++|++..-.+ .+.++. .++.|++|+|+ +++
T Consensus 57 ---------~~~~~~~~v~ll~Pv~p~~--i~~vG~NY~~~~~~h~~e~~~~~~~--~~~~~~~~~~~~P~~F~k~~~~~ 123 (293)
T 2q18_X 57 ---------LKSFQINDIRITKPIDPPE--VWGSGISYEMARERYSEENVAKILG--KTIYEKVYDAVRPEIFFKATPNR 123 (293)
T ss_dssp ---------HHHSEETTEEECCSSCCSC--EEEEESCBC---------CCCEETT--EEHHHHHHHSSSCEEEEEECGGG
T ss_pred ---------CCCCCcccceEeCCcCcce--EEEEEechhhhhHHHHHHhcccccc--ccccccccCCCCCEEEECCCCCe
Confidence 1236889999999998443 4555 665 88887621000 000000 13569999996 799
Q ss_pred cccCCCeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhC
Q 014784 170 VVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV 249 (418)
Q Consensus 170 ivg~g~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~ 249 (418)
+++++++|.+|.. ++.+|||+||||||||. ++ |+|||++||+|+||+|.+.
T Consensus 124 ~~g~~~~i~~p~~--------------~~~~d~E~ELavvIg~~---~~----------i~Gyt~~nDvs~Rd~q~~~-- 174 (293)
T 2q18_X 124 CVGHGEAIAVRSD--------------SEWTLPEPELAVVLDSN---GK----------ILGYTIMDDVSARDLEAEN-- 174 (293)
T ss_dssp EECTTSCEEECTT--------------CSCEECCEEEEEEECTT---CC----------EEEEEEEEECEEHHHHHHC--
T ss_pred EecCCCEEEcCCC--------------CCCcceEEEEEEEECCC---Cc----------CceEEEEEEeEeehhhhhc--
Confidence 9999999999865 78899999999999998 64 9999999999999999863
Q ss_pred CCCCccccccCCC--CCCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEec--CCC-
Q 014784 250 PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRS--NFK- 324 (418)
Q Consensus 250 ~l~~~~~Ksfdt~--lGPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~--~t~- 324 (418)
+.+|.+||+|||+ +|||++|+|++.+ +.++.|+|+|++ ||+++|++ +++
T Consensus 175 ~~~~~~aK~~d~~~plGP~ivt~dei~d--------------------~~~l~i~l~v~~------NGe~~q~g~~~t~~ 228 (293)
T 2q18_X 175 PLYLPQSKIYAGCCAFGPVIVTSDEIKN--------------------PYSLDITLKIVR------EGRVFFEGSVNTNK 228 (293)
T ss_dssp GGGHHHHHCSTTCEEEEEEEECGGGCSC--------------------TTSCEEEEEEEE------TTEEEEEEEEEGGG
T ss_pred ccCccccccCCCCEEECCcEeCHHHcCC--------------------cceeEEEEEEEE------CCEEEEECCCCHHH
Confidence 3346799999997 9999999999865 356888888765 89999986 455
Q ss_pred -CCCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCce
Q 014784 325 -YWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYT 403 (418)
Q Consensus 325 -~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~ 403 (418)
+|++++||+|+ |+++||+|||||+||| |+++. ...||++||+|+++ |+
T Consensus 229 mi~~~~~li~~l-s~~~tL~pGDvI~TGT--g~~p~---------------------~~~~l~~GD~v~~~--i~----- 277 (293)
T 2q18_X 229 MRRKIEEQIQYL-IRDNPIPDGTILTTGT--AIVPG---------------------RDKGLKDEDIVEIT--IS----- 277 (293)
T ss_dssp BCSCHHHHHHHH-HTTCCCCTTEEEECCC--SCCCC---------------------TTCCCCTTCEEEEE--ET-----
T ss_pred hccCHHHHHHHH-HcCCCCCCCCEEECCC--CCCCC---------------------CCcccCCCCEEEEE--Ec-----
Confidence 99999999997 9999999999999999 32211 24799999999998 66
Q ss_pred EeeeeeeeEEeeCC
Q 014784 404 VGFGTCSGKIVPST 417 (418)
Q Consensus 404 ~~~G~~~~~v~~~~ 417 (418)
|||+|+|+|+.++
T Consensus 278 -glG~l~n~v~~~~ 290 (293)
T 2q18_X 278 -NIGTLITPVKKRR 290 (293)
T ss_dssp -TTEEEEEEEEECC
T ss_pred -CcEEEEEEEEeee
Confidence 8999999999865
No 11
>1saw_A Hypothetical protein FLJ36880; structural genomics, fumarylacetoacetatehydrolase family, unknown function; 2.20A {Homo sapiens} SCOP: d.177.1.1
Probab=100.00 E-value=2.7e-45 Score=348.23 Aligned_cols=191 Identities=20% Similarity=0.273 Sum_probs=161.8
Q ss_pred cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCC
Q 014784 134 SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPG 213 (418)
Q Consensus 134 ~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~ 213 (418)
|.+|++|+|.. .| +.|++|.|+++++++++++|.+|.. ++.+|||+||||||||.
T Consensus 28 y~~h~~e~g~~--------~P---~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~~~~~E~ELavvig~~ 82 (225)
T 1saw_A 28 YADHVREMRSA--------VL---SEPVLFLKPSTAYAPEGSPILMPAY--------------TRNLHHELELGVVMGKR 82 (225)
T ss_dssp BC----------------------CCCCEEEEEGGGEEETTSCEECCTT--------------CSCEEECEEEEEEESSC
T ss_pred cHHHHHHhCCC--------CC---CCCEEEECCcceeeCCCCeEECCCC--------------CCCccEEEEEEEEECCC
Confidence 67899999753 12 4599999999999999999999864 67899999999999998
Q ss_pred CCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhC-CCCCccccccCCC--CCCccccccccCCCcCCCCCCCCCCCcc
Q 014784 214 NELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYV-PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPY 290 (418)
Q Consensus 214 ~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~-~l~~~~~Ksfdt~--lGPwivt~del~~~~~~~~~~~~~~~~~ 290 (418)
|+++++++|++||+||+++||||+||+|.+++. .++|+++|+|+++ +|||+ +.+++.+
T Consensus 83 ---~~~v~~~~a~~~i~g~~~~nDvt~r~~q~~~~~~~~~~~~aK~~d~~~plGp~v-~~~~~~d--------------- 143 (225)
T 1saw_A 83 ---CRAVPEAAAMDYVGGYALCLDMTARDVQDECKKKGLPWTLAKSFTASCPVSAFV-PKEKIPD--------------- 143 (225)
T ss_dssp ---BCSCCTTTGGGSEEEEEEEECCEEHHHHHHHHHHTCCSHHHHCSTTCEEECCCE-ETTSCSC---------------
T ss_pred ---CCCCCHHHHHHhheEEEecccccHHHHhhhhhccCCCceEeecCCCCEecCCcc-cHHHcCC---------------
Confidence 999999999999999999999999999998753 4789999999997 99996 6677743
Q ss_pred hhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEE
Q 014784 291 LAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELT 368 (418)
Q Consensus 291 ~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~ 368 (418)
+.++.|+++| ||+++|+++++ +|+++++|+|+ |++++|+|||||+||||+|++
T Consensus 144 -----~~~l~l~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~tL~~GDvI~TGTp~Gvg----------- 198 (225)
T 1saw_A 144 -----PHKLKLWLKV--------NGELRQEGETSSMIFSIPYIISYV-SKIITLEEGDIILTGTPKGVG----------- 198 (225)
T ss_dssp -----TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCE-----------
T ss_pred -----CceeEEEEEE--------CCEEEEEEcHHHcCCCHHHHHHHH-hCCCCcCCCCEEEcCCCCCce-----------
Confidence 3568889988 99999999988 99999999997 899999999999999999974
Q ss_pred ecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEeeC
Q 014784 369 WNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 416 (418)
Q Consensus 369 ~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 416 (418)
.|++||+|+++ ++ |+|+++|+|+.+
T Consensus 199 ---------------~l~~Gd~v~~~--i~------glG~l~~~v~~~ 223 (225)
T 1saw_A 199 ---------------PVKENDEIEAG--IH------GLVSMTFKVEKP 223 (225)
T ss_dssp ---------------EECTTCEEEEE--ET------TTEEEEEEEECC
T ss_pred ---------------eCCCCCEEEEE--EC------CcEEEEEEEEEe
Confidence 46899999888 66 899999999864
No 12
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=1.5e-45 Score=380.27 Aligned_cols=210 Identities=21% Similarity=0.288 Sum_probs=180.5
Q ss_pred cceecCCceEcCCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCC
Q 014784 110 SLVPMGKVEMLLPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAP 186 (418)
Q Consensus 110 ~~~~l~~v~ll~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~ 186 (418)
..+++++++|++|+. . ..+|. |.+|++|+|.. . ++.|++|.|+++++++++++|.+|..
T Consensus 208 ~~~~~~~~~~~~p~~-~--~i~~vG~ny~~h~~e~g~~--------~---p~~P~~f~k~~~~~~~~g~~i~~p~~---- 269 (429)
T 1gtt_A 208 EVTTRKSFPTLPHPH-G--TLFALGLNYADHASELEFK--------P---PEEPLVFLKAPNTLTGDNQTSVRPNN---- 269 (429)
T ss_dssp GCCSCCCCCCCSSSC-S--CEEEESSCBCCC-------------------CCSCCEEEECGGGEECTTEEEEECTT----
T ss_pred cccccccceecCCCC-C--cEEEEEeCHHHHHHHhCCC--------C---CCCCEEEEcCcceEeCCCCeEEcCCC----
Confidence 467899999999998 3 24554 68999999753 1 25699999999999999999999875
Q ss_pred CCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCChhHHhhceeEEEEEEcCchhh-HhhhhhCCCCCccccccCCC--C
Q 014784 187 SGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDVNEAADHIFGVMLMNDWSARD-IQAWEYVPLGPFLGKSFGTT--L 263 (418)
Q Consensus 187 ~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~eeA~~~I~Gyti~ND~SaRD-~Q~~~~~~l~~~~~Ksfdt~--l 263 (418)
+..+|||+||||||||+ |+++++++|++||+||+++||+|+|| +|... .+|.++|+||++ +
T Consensus 270 ----------~~~~~~E~Elavvig~~---~~~v~~~~a~~~i~g~~~~nD~t~Rd~lq~~~---~~w~~~K~~d~~~~l 333 (429)
T 1gtt_A 270 ----------IEYMHYEAELVVVIGKQ---ARNVSEADAMDYVAGYTVCNDYAIRDYLENYY---RPNLRVKSRDGLTPM 333 (429)
T ss_dssp ----------CSCEECCEEEEEEECSC---BSSCCTTTGGGGEEEEEEEECCEEGGGCCSSS---SSCHHHHSCTTCEEB
T ss_pred ----------CCCccEEEEEEEEECCC---CCCCCHHHHHhhheEEEEEEEcccchhhhhhc---CCccccccCCCCEEE
Confidence 67899999999999999 99999999999999999999999999 58653 479999999997 9
Q ss_pred CCccccccccCCCcCCCCCCCCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhccee
Q 014784 264 SPWIVTLDALEPFACDSPKQDPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCN 341 (418)
Q Consensus 264 GPwivt~del~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~t 341 (418)
|||++|.+++++ +.++.|+++| ||+++|+++++ +|+++++|+|+ |+++|
T Consensus 334 Gp~iv~~~~~~d--------------------~~~l~i~l~v--------NGe~~q~g~~~~mi~~~~~lia~l-s~~~t 384 (429)
T 1gtt_A 334 LSTIVPKEAIPD--------------------PHNLTLRTFV--------NGELRQQGTTADLIFSVPFLIAYL-SEFMT 384 (429)
T ss_dssp CSCCEEGGGCSC--------------------TTSCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSC
T ss_pred CCcccCHHHcCC--------------------CccceEEEEE--------CCEEEEEeCHHHcCCCHHHHHHHH-hCCCC
Confidence 999999999854 3568899999 99999999998 99999999997 99999
Q ss_pred cCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEeeC
Q 014784 342 LRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 416 (418)
Q Consensus 342 L~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 416 (418)
|+|||||+||||+|++ +|++||+|+++ ++ |||+++|+|+.+
T Consensus 385 L~~GDvI~TGTp~gvg--------------------------~l~~GD~v~~~--i~------glG~l~~~v~~~ 425 (429)
T 1gtt_A 385 LNPGDMIATGTPKGLS--------------------------DVVPGDEVVVE--VE------GVGRLVNRIVSE 425 (429)
T ss_dssp BCTTCEEECCCCSCCC--------------------------BCCTTCEEEEE--ET------TTEEEEEEEEEH
T ss_pred cCCCCEEEcCCCCCCe--------------------------ECCCCCEEEEE--Ec------CcEEEEEEEEec
Confidence 9999999999999974 68999999998 66 899999999864
No 13
>1nkq_A Hypothetical 28.8 kDa protein in PSD1-SKO1 intergenic region; dimer, PSI, protein structure initiative; 2.20A {Saccharomyces cerevisiae} SCOP: d.177.1.1
Probab=100.00 E-value=2.1e-43 Score=341.56 Aligned_cols=203 Identities=22% Similarity=0.237 Sum_probs=163.5
Q ss_pred CCcccCCcceeec---cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccC------------------------
Q 014784 121 LPMEIGDYTDFFS---SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVIS------------------------ 173 (418)
Q Consensus 121 ~Pv~~~~~~~~~~---~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~------------------------ 173 (418)
.|+..+. +++|. |.+|++|+|.. . ++.|++|+|++++++++
T Consensus 4 ~~~~~~~-ki~cvG~Ny~~H~~E~g~~--------~---p~~P~~F~K~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (259)
T 1nkq_A 4 NYLKAAR-KIICIGRNYAAHIKELNNS--------T---PKQPFFFLKPTSSIVTPLSSSLVKTTRPANSTFNGLNEDGT 71 (259)
T ss_dssp GGGGGCC-CEEEECSCBCSSGGGGGC---------------CCCEEEECGGGEEBCTTCC------CCSCSCCCCCTTSC
T ss_pred ccCCCCC-EEEEEecCHHHHHHHhCCC--------C---CCCCEEEeeChhhEecccccccccccccccccccccccccC
Confidence 4666554 24554 67899999753 1 25699999999999998
Q ss_pred C-CeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCCCCCCCCCCh---hHHhhceeEEEEEEcCchhhHhhhhhC
Q 014784 174 G-TDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPGNELGKPIDV---NEAADHIFGVMLMNDWSARDIQAWEYV 249 (418)
Q Consensus 174 g-~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~~~~gr~v~~---eeA~~~I~Gyti~ND~SaRD~Q~~~~~ 249 (418)
+ ++|.+|.. + ++|||+||||||||+ ++++++ ++|++||+||+++||||+||+|.+++.
T Consensus 72 ~~~~I~~p~~--------------~-~~d~E~ELavvIg~~---~~~v~~~t~~ea~~~I~g~~~~nDvt~Rd~q~~~~~ 133 (259)
T 1nkq_A 72 NPGPIFIPRG--------------V-KVHHEIELALIVSKH---LSNVTKMKPEEVYDSISGVALALDLTARNVQDEAKK 133 (259)
T ss_dssp CBCCEEECTT--------------C-CEEECEEEEEEECSC---BCSCCCCCGGGTGGGEEEEEEEECCEEHHHHHHHHH
T ss_pred CCCcEEcCCC--------------C-cccEEEEEEEEECCC---CCCCCcCCHHHHHhhhhEEEEEEeeeHHHhhhhhhh
Confidence 4 78887753 4 699999999999999 999988 999999999999999999999987553
Q ss_pred -CCCCccccccCCC--CCCccccccccCCCcCCCCCCCCCCCcchhccCC-ceeeEEEEEEEeeCCCCCcEEEEecCCC-
Q 014784 250 -PLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYLAEKIS-KNYDISLEVQIKPAGKEDSCVVTRSNFK- 324 (418)
Q Consensus 250 -~l~~~~~Ksfdt~--lGPwivt~del~~~~~~~~~~~~~~~~~~~~~~~-~~l~i~l~v~~n~~~~~ng~~~q~~~t~- 324 (418)
+++|.++|+|||+ +|||+ +.+++.+.+. +. .++.|+++| ||+++|+++++
T Consensus 134 ~~~~~~~aK~~d~~~p~Gp~V-~~~~~~d~~~----------------dl~~~l~l~l~v--------NGe~~q~g~t~~ 188 (259)
T 1nkq_A 134 KGLPWTISKGFDTFMPISAIV-SREKFSSYKS----------------NLQDIFRVKCSV--------NGQLRQDGGTNL 188 (259)
T ss_dssp HTCCSHHHHHSTTCEEBCCCE-EGGGGGGGTT----------------CCTTTEEEEEEE--------TTEEEEEEEGGG
T ss_pred cCCCcceeeccCcCCCcceEE-ECccccCccc----------------ccccceEEEEEE--------CCEEEEEEcHHH
Confidence 6799999999995 99997 4577654210 01 468888888 99999999887
Q ss_pred -CCCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCce
Q 014784 325 -YWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYT 403 (418)
Q Consensus 325 -~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~ 403 (418)
+|++++||+|+ |++++|+|||||+||||+|++ +|++||+|+++ ++
T Consensus 189 m~~~~~~Lia~l-S~~~tL~pGDvI~TGTp~Gvg--------------------------~l~~GD~v~~~--i~----- 234 (259)
T 1nkq_A 189 MLHPLHKILQHI-STMISLEPGDIILTGTPAGVG--------------------------ELKPGDRVHCE--LL----- 234 (259)
T ss_dssp BSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCE--------------------------EECTTCEEEEE--EE-----
T ss_pred cCCCHHHHHHHH-hCCCCcCCCCEEEeCCCCCcE--------------------------ecCCCCEEEEE--EE-----
Confidence 99999999997 899999999999999999975 45777777776 44
Q ss_pred EeeeeeeeEE
Q 014784 404 VGFGTCSGKI 413 (418)
Q Consensus 404 ~~~G~~~~~v 413 (418)
|+|++.|++
T Consensus 235 -glG~~~~~~ 243 (259)
T 1nkq_A 235 -QNNDNIVDM 243 (259)
T ss_dssp -ETTEEEEEE
T ss_pred -cCCceeEEE
Confidence 677666554
No 14
>1gtt_A 4-hydroxyphenylacetate degradation bifunctional isomerase/decarboxylase; lyase, bifunctional enzyme, multifunctional enzyme decarboxylase; 1.7A {Escherichia coli} SCOP: d.177.1.1 d.177.1.1 PDB: 1i7o_A
Probab=100.00 E-value=1.2e-41 Score=351.07 Aligned_cols=184 Identities=19% Similarity=0.141 Sum_probs=153.1
Q ss_pred cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCC
Q 014784 134 SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPG 213 (418)
Q Consensus 134 ~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~ 213 (418)
|.+|++|++..+.... ....++.|++|+|++++++++|++|.+|.. ++ +|||+||||||||+
T Consensus 12 y~~H~~e~~~~~~~~~---~~~~p~~P~~f~k~~~~~~~~g~~i~~p~~--------------~~-~~~E~Elavvig~~ 73 (429)
T 1gtt_A 12 HRSQLDAWQEAFQQSP---YKAPPKTAVWFIKPRNTVIGCGEPIPFPQG--------------EK-VLSGATVALIVGKT 73 (429)
T ss_dssp BHHHHHHHTTGGGSTT---TCSCCSSCEEEEECGGGEECTTCCEEECTT--------------CC-EECCEEEEEEECSC
T ss_pred HHHHHHHhhccccccc---cCCCCCCCEEEEcCcceEEcCCCeeecCCC--------------CC-ccEEEEEEEEECCC
Confidence 7899999986432110 011246899999999999999999999864 56 99999999999999
Q ss_pred CCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhhCCCCCccccccCCC--CCCccccccccCCCcCCCCCCCCCCCcch
Q 014784 214 NELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGTT--LSPWIVTLDALEPFACDSPKQDPQPLPYL 291 (418)
Q Consensus 214 ~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~~~l~~~~~Ksfdt~--lGPwivt~del~~~~~~~~~~~~~~~~~~ 291 (418)
|+++++++|++||+|||++||||+||+|.. .+|.++|+|||+ +||| +++.+
T Consensus 74 ---~~~v~~~~a~~~i~gy~~~nD~s~Rd~~~~----~~~~~aK~fd~~~~lGp~----~~~~d---------------- 126 (429)
T 1gtt_A 74 ---ATKVREEDAAEYIAGYALANDVSLPEESFY----RPAIKAKCRDGFCPIGET----VALSN---------------- 126 (429)
T ss_dssp ---BSSCCGGGGGGGEEEEEEEECCBSCCCCSS----SCCHHHHCSTTCEEBCCC----BCCSC----------------
T ss_pred ---CCCCCHHHHHhHhhEEEEEEEeeehhhhcc----CCccccCCCCCCEEECCh----hhcCC----------------
Confidence 999999999999999999999999997743 379999999997 9999 55543
Q ss_pred hccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEe
Q 014784 292 AEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTW 369 (418)
Q Consensus 292 ~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~ 369 (418)
+.++.|+++| ||+++|+++++ +|+++++|+|+ |+++||+|||||+||||+|++++++||.+|+++
T Consensus 127 ----~~~l~i~~~v--------NGe~~q~g~t~~mi~~~~~li~~l-s~~~tL~~GDvI~TGTp~g~~~l~~GD~v~~~i 193 (429)
T 1gtt_A 127 ----VDNLTIYTEI--------NGRPADHWNTADLQRNAAQLLSAL-SEFATLNPGDAILLGTPQARVEIQPGDRVRVLA 193 (429)
T ss_dssp ----CTTCEEEEEE--------TTEEEEEEEGGGBSSCHHHHHHHH-HTTSCBCTTCEEECCCCSCCCEECTTCEEEEEE
T ss_pred ----ccccEEEEEE--------CCEEEEeCCHHHhcCCHHHHHHHH-hcCCCcCCCCEEEEeccCcceecCCCCEEEEEE
Confidence 3568899998 99999999988 99999999997 999999999999999999986555555555555
Q ss_pred cCccce
Q 014784 370 NGQKPL 375 (418)
Q Consensus 370 ~G~~~l 375 (418)
+|++.+
T Consensus 194 ~glG~l 199 (429)
T 1gtt_A 194 EGFPPL 199 (429)
T ss_dssp TTSCCE
T ss_pred CCccee
Confidence 544443
No 15
>2eb4_A 2-OXO-HEPT-3-ENE-1,7-dioate hydratase; lyase; 1.60A {Escherichia coli} PDB: 2eb5_A 2eb6_A
Probab=100.00 E-value=1.4e-35 Score=288.23 Aligned_cols=187 Identities=14% Similarity=0.067 Sum_probs=152.9
Q ss_pred cHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEEEcCC
Q 014784 134 SMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAVVGPG 213 (418)
Q Consensus 134 ~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavVIGk~ 213 (418)
|.+|.+++|.. .|.++.++.++++++|++|.+|.. .++|||+||||||||+
T Consensus 66 ~~~~~~~~g~~--------------~P~~~~l~~~~~~~~g~~i~~p~~---------------~~~~~E~ELa~vig~~ 116 (267)
T 2eb4_A 66 SKAMQASSQIS--------------EPDYGALLDDMFFHDGSDIPTDRF---------------IVPRIEVELAFVLAKP 116 (267)
T ss_dssp HHHHCSSCCCC--------------SCEEEEEEGGGEECTTEEECGGGC---------------SSCEEEEEEEEEESSC
T ss_pred CHHHHHHhCCC--------------CCcEEEEechheecCCCeecCCcc---------------CcccEeeEEEEEECCC
Confidence 67888777642 356666667899999999988752 3689999999999998
Q ss_pred CCCCCCCChhHHhhceeEEEEEEcCchhhHhhhhh-----CCCCCcccc-ccCCC--CCCccccccccCCCcCCCCCCCC
Q 014784 214 NELGKPIDVNEAADHIFGVMLMNDWSARDIQAWEY-----VPLGPFLGK-SFGTT--LSPWIVTLDALEPFACDSPKQDP 285 (418)
Q Consensus 214 ~~~gr~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~-----~~l~~~~~K-sfdt~--lGPwivt~del~~~~~~~~~~~~ 285 (418)
++ |++++++||++||+||+++||++.|++|.|.. ..+.|..+| .|+++ +|||++++++++
T Consensus 117 l~-~~~vt~~~a~~~v~g~~~~~ei~d~r~~~~~~~~~~~~~~~~~~Ad~~~~~~~~lGp~~v~~~~~d----------- 184 (267)
T 2eb4_A 117 LR-GPNCTLFDVYNATDYVIPALELIDARCHNIDPETQRPRKVFDTISDNAANAGVILGGRPIKPDELD----------- 184 (267)
T ss_dssp BC-CSSCCHHHHHHHEEEEEEEEEEECCSBCCC------CCHHHHHHHTGGGEEEEEECSCCBCTTSSC-----------
T ss_pred CC-CCCCCHHHHHHhhceEEEEEEeecccccccccccccccCccceeecccccccEEECCCcCCcccCC-----------
Confidence 54 68999999999999999999999988887754 123355555 45554 999999988874
Q ss_pred CCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhcce-----ecCCCCEEEcCCCCCCcC
Q 014784 286 QPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTINGC-----NLRSGDLLGTGTISGPEP 358 (418)
Q Consensus 286 ~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~~~-----tL~pGDvI~TGTp~Gvg~ 358 (418)
+.++.++|++ ||+++|+++++ +|++.++|+|+ |+.+ ||+|||||+||||.|+
T Consensus 185 ----------~~~l~~~l~v--------NGe~~q~g~t~~ml~~p~~~i~~l-s~~l~~~g~tL~~GDvI~TGT~~g~-- 243 (267)
T 2eb4_A 185 ----------LRWISALMYR--------NGVIEETGVAAGVLNHPANGVAWL-ANKLAPYDVQLEAGQIILGGSFTRP-- 243 (267)
T ss_dssp ----------GGGCEEEEEE--------TTEEEEEEEGGGTTTSTTHHHHHH-HHHHGGGTCCBCTTCEEECCCSSCC--
T ss_pred ----------hhhCeEEEEE--------CCEEEEEecHHhcccCHHHHHHHH-HHHHHHcCCCCCCCCEEECCCCCCC--
Confidence 3568899999 99999999988 99999999997 6654 9999999999999885
Q ss_pred CCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEe
Q 014784 359 ESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIV 414 (418)
Q Consensus 359 ~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~ 414 (418)
.+|++||+|+++ ++ |+|+++|++.
T Consensus 244 ------------------------~~l~~GD~v~~~--i~------glG~l~~~~~ 267 (267)
T 2eb4_A 244 ------------------------VPARKGDTFHVD--YG------NMGSISCRFV 267 (267)
T ss_dssp ------------------------EECCTTCEEEEE--CG------GGCEEEEEEC
T ss_pred ------------------------EECCCCCEEEEE--Ec------CCCeEEEEEC
Confidence 478999999887 66 8999999873
No 16
>2wqt_A 2-keto-4-pentenoate hydratase; lyase, dodecahedral form, aromatic hydrocarbons catabolism; 2.80A {Escherichia coli} PDB: 1sv6_A
Probab=100.00 E-value=3.7e-34 Score=278.61 Aligned_cols=189 Identities=14% Similarity=0.097 Sum_probs=154.1
Q ss_pred eeeccHHHHHHhccccCCCCCCCCCCCCCCCeeeecCCcccccCCCeeeCCCCCcCCCCCCCCCCCCCCCceeceEEEEE
Q 014784 130 DFFSSMHHAKNCGTIFRGPANAVPANWFHLPIAYHGRASSVVISGTDIVRPRGQFAPSGNSPPPFGPSQKLDFELEMAAV 209 (418)
Q Consensus 130 ~~~~~~~H~~e~g~~~~~~~~~~~p~~~~~P~~f~k~~ssivg~g~~I~~P~~~~~~~~~~~p~~~~s~~lDyE~ELavV 209 (418)
....|.+|++|+|.. .| .+|++|.| +++++|++|.+|.. .++|||+|||||
T Consensus 62 iGln~~~h~~e~g~~--------~P---~~~~lf~~---~~~~~g~~i~~p~~---------------~~~~~E~ELa~v 112 (270)
T 2wqt_A 62 VGLTHPKVQQQLGVD--------QP---DFGTLFAD---MCYGDNEIIPFSRV---------------LQPRIEAEIALV 112 (270)
T ss_dssp EECCSHHHHHTTTCS--------SC---EEEEEEGG---GEEETTEEECGGGS---------------SSCEEEEEEEEE
T ss_pred ecCCCHHHHHHhCCC--------CC---CEEEEech---heeCCCCeeecCcc---------------CccceeeEEEEE
Confidence 334488999999853 12 45888876 78999999988753 479999999999
Q ss_pred EcCCCCCCCCCChhHHhh---ceeEEEEEEcCchhhHhhhhhCCCCCccccccCC---CCCCccccccccCCCcCCCCCC
Q 014784 210 VGPGNELGKPIDVNEAAD---HIFGVMLMNDWSARDIQAWEYVPLGPFLGKSFGT---TLSPWIVTLDALEPFACDSPKQ 283 (418)
Q Consensus 210 IGk~~~~gr~v~~eeA~~---~I~Gyti~ND~SaRD~Q~~~~~~l~~~~~Ksfdt---~lGPwivt~del~~~~~~~~~~ 283 (418)
|||+++ |++++++||++ ||++|+.+||++.||||... ....+|++.+ .+|||++++++++.
T Consensus 113 ig~~~~-g~~vt~~~a~~ai~~v~~~~ei~D~~~~~~~~k~----~d~~aDn~s~~~~~lGp~~v~~~~~d~-------- 179 (270)
T 2wqt_A 113 LNRDLP-ATDITFDELYNAIEWVLPALEVVGSRIRDWSIQF----VDTVADNASCGVYVIGGPAQRPAGLDL-------- 179 (270)
T ss_dssp ESSCBC-CTTCCHHHHHTTEEEEEEEEEEECCSBGGGCCCH----HHHHHTGGGCCEEEECBCCBCSTTCCC--------
T ss_pred ECCCCC-CCCCCHHHHHHhhCeEEEEEEEEcCcccccCCCh----hcEEccCccCCCEeECcCcCCcccCCh--------
Confidence 999855 68999999998 88999999999999987211 1123343333 49999999988742
Q ss_pred CCCCCcchhccCCceeeEEEEEEEeeCCCCCcEEEEecCCC--CCCHHHHHHHHHhc-----ceecCCCCEEEcCCCCCC
Q 014784 284 DPQPLPYLAEKISKNYDISLEVQIKPAGKEDSCVVTRSNFK--YWTLTQQLAHHTIN-----GCNLRSGDLLGTGTISGP 356 (418)
Q Consensus 284 ~~~~~~~~~~~~~~~l~i~l~v~~n~~~~~ng~~~q~~~t~--~~~~~~lIa~~~S~-----~~tL~pGDvI~TGTp~Gv 356 (418)
.++.++|++ ||+++|+++++ +|++.++|+|+ |+ ++||+|||||+||||.|+
T Consensus 180 -------------~~l~i~l~v--------NGe~~q~g~~~~ml~~p~~~v~~l-s~~l~~~g~tL~~GdvI~TGT~~g~ 237 (270)
T 2wqt_A 180 -------------KNCAMKMTR--------NNEEVSSGRGSECLGHPLNAAVWL-ARKMASLGEPLRTGDIILTGALGPM 237 (270)
T ss_dssp -------------SSCEEEEEE--------TTEEEEEEEGGGTTTSHHHHHHHH-HHHHHHTTCCBCTTCEEEEEESSCC
T ss_pred -------------hhCeEEEEE--------CCEEEEEEchhhccCCHHHHHHHH-HHHHHhcCCCcCCCCEEEcCCCCCC
Confidence 568889988 99999999988 99999999997 66 799999999999999875
Q ss_pred cCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEEEEEecCCceEeeeeeeeEEeeC
Q 014784 357 EPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGFCKGNGYTVGFGTCSGKIVPS 416 (418)
Q Consensus 357 g~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~~~~~~~~~~~G~~~~~v~~~ 416 (418)
.+|++||+|+++ ++ |||+++|+|+.+
T Consensus 238 --------------------------~~l~~GD~v~~~--i~------glG~l~~~v~~~ 263 (270)
T 2wqt_A 238 --------------------------VAVNAGDRFEAH--IE------GIGSVAATFSSA 263 (270)
T ss_dssp --------------------------EECCTTCEEEEE--ET------TTEEEEEEECC-
T ss_pred --------------------------eeCCCCCEEEEE--Ec------CCceEEEEEEeC
Confidence 478999999887 66 899999999864
No 17
>2k52_A Uncharacterized protein MJ1198; metal-binding, zinc, zinc-finger, structural genomics, PSI-2, protein structure initiative; NMR {Methanocaldococcus jannaschii}
Probab=69.34 E-value=4.3 Score=30.99 Aligned_cols=64 Identities=17% Similarity=0.305 Sum_probs=37.9
Q ss_pred eecCCCCEEEcCCCCCCcCCCCCceEEEE--ecCcccee-cCCCCCccCCCCCEEEEEEEE-ecCCceEee
Q 014784 340 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDGFTRKFLEDGDEVTFTGFC-KGNGYTVGF 406 (418)
Q Consensus 340 ~tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~l~-~~~~~~~~L~~GD~V~~~~~~-~~~~~~~~~ 406 (418)
|.++.||+ .+|+..++.+ -|..+++. ++|.-.++ +....-..++.||+|++.+.- +.+.++|.|
T Consensus 1 m~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gllh~sel~~~~~~~~~~Gd~V~v~V~~vd~~~~~i~l 68 (80)
T 2k52_A 1 MDVEPGKF-YKGVVTRIEK--YGAFINLNEQVRGLLRPRDMISLRLENLNVGDEIIVQAIDVRPEKREIDF 68 (80)
T ss_dssp CCCCTTCE-EEEEEEEEET--TEEEEEEETTEEEEECGGGCSSCCGGGCCTTCEEEEEEEEEETTTTEEEE
T ss_pred CCCCCCCE-EEEEEEEEeC--CEEEEEECCCCEEEEEHHHCCcccceeeCCCCEEEEEEEEEECCCCEEEE
Confidence 46788997 7888888754 47777764 33333322 211111379999999998532 233355544
No 18
>3l53_A Putative fumarylacetoacetate isomerase/hydrolase; structural genomics, PSI-2, protein structure initiative; HET: TAR; 2.10A {Oleispira antarctica} PDB: 3v77_A*
Probab=46.16 E-value=13 Score=34.27 Aligned_cols=13 Identities=31% Similarity=0.207 Sum_probs=11.1
Q ss_pred ccCCCCCEEEEEE
Q 014784 383 KFLEDGDEVTFTG 395 (418)
Q Consensus 383 ~~L~~GD~V~~~~ 395 (418)
..|++||+|++++
T Consensus 197 g~l~~GD~v~~~i 209 (224)
T 3l53_A 197 GPLEVGDSLSAKL 209 (224)
T ss_dssp EECCTTCEEEEEE
T ss_pred EEcCCCCEEEEEE
Confidence 4699999999983
No 19
>2khj_A 30S ribosomal protein S1; OB fold, acetylation, phosphoprotein, ribonucleoprotein, RNA-binding; NMR {Escherichia coli}
Probab=44.45 E-value=21 Score=28.71 Aligned_cols=64 Identities=20% Similarity=0.203 Sum_probs=40.1
Q ss_pred eecCCCCEEEcCCCCCCcCCCCCceEEEE--ecCcccee-cCCC----CCccCCCCCEEEEEEEE-ecCCceEee
Q 014784 340 CNLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDGF----TRKFLEDGDEVTFTGFC-KGNGYTVGF 406 (418)
Q Consensus 340 ~tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~l~-~~~~----~~~~L~~GD~V~~~~~~-~~~~~~~~~ 406 (418)
..++.||+ .+|+..++.. -|..+++. ++|.-+++ +... +...++.||+|++.+.- +.++++|.|
T Consensus 27 ~~~~~G~i-v~G~V~~v~~--~G~fV~l~~~~~Gll~~sel~~~~~~~~~~~~~vGd~V~v~V~~vd~~~~ki~L 98 (109)
T 2khj_A 27 ALNKKGAI-VTGKVTAVDA--KGATVELADGVEGYLRASEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISL 98 (109)
T ss_dssp TTCCSSSE-EEEEEEEECS--SCEEEECSTTCBCCBCTTCCCSSSSSSGGGSCCTTCEEEEEEEEEETTTTEEEE
T ss_pred hcCCCCCE-EEEEEEEEEC--CeEEEEECCCCEEEEEHHHcCcccccChhhccCCCCEEEEEEEEEECCCCEEEE
Confidence 36889997 6789888754 47777763 34444432 3221 34579999999988532 234556644
No 20
>2k4k_A GSP13, general stress protein 13; cytoplasm, stress response, RNA binding protein; NMR {Bacillus subtilis}
Probab=43.16 E-value=15 Score=30.74 Aligned_cols=63 Identities=21% Similarity=0.333 Sum_probs=39.0
Q ss_pred ecCCCCEEEcCCCCCCcCCCCCceEEEE--ecCcccee-cCCC----CCccCCCCCEEEEEEEE-ecCCceEee
Q 014784 341 NLRSGDLLGTGTISGPEPESLGCLLELT--WNGQKPLS-LDGF----TRKFLEDGDEVTFTGFC-KGNGYTVGF 406 (418)
Q Consensus 341 tL~pGDvI~TGTp~Gvg~~~~G~~le~~--~~G~~~l~-~~~~----~~~~L~~GD~V~~~~~~-~~~~~~~~~ 406 (418)
.++.||+ ..|+..++.. -|..+++. ++|.-.++ +.+. ....++.||+|.+.+.- +.+.++|.|
T Consensus 4 ~~~vG~i-v~G~V~~i~~--~G~FV~l~~~~~Glihisel~~~~~~~~~~~~~vGd~V~vkV~~vd~~~~kI~L 74 (130)
T 2k4k_A 4 KFEVGSV-YTGKVTGLQA--YGAFVALDEETQGLVHISEVTHGFVKDINEHLSVGDEVQVKVLAVDEEKGKISL 74 (130)
T ss_dssp CCCTTCE-EEEEEEEEET--TEEEEEEETTEEEEEEGGGTSSSCCSCGGGTCCTTCEEEEEEEEEETTTTEEEE
T ss_pred cCCCCCE-EEEEEEEEeC--CeEEEEECCCcEEEEEHHHCCcccccCccccCCCCCEEEEEEEEEeCCCCEEEE
Confidence 5788995 5788888754 47777763 33333332 3222 34689999999988532 233556654
No 21
>3i4o_A Translation initiation factor IF-1; cytoplasm, protein biosynthesis; 1.47A {Mycobacterium tuberculosis} SCOP: b.40.4.5
Probab=36.69 E-value=37 Score=26.25 Aligned_cols=30 Identities=13% Similarity=-0.037 Sum_probs=19.9
Q ss_pred CceEEEEecCccceecCCCCCccCCCCCEEEEEEE
Q 014784 362 GCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFTGF 396 (418)
Q Consensus 362 G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~~~ 396 (418)
|..+.+.+.|+-.. ...|+.+||.|.++.+
T Consensus 36 G~~~~c~i~GK~Rk-----~~I~Il~GD~V~ve~~ 65 (79)
T 3i4o_A 36 GHKVLAHISGKMRQ-----HYIRILPEDRVVVELS 65 (79)
T ss_dssp SCEEEEEECHHHHH-----TTCCCCTTCEEEEEEE
T ss_pred CCEEEEEeCcceec-----CCccCCCCCEEEEEEC
Confidence 44555555554321 3579999999999854
No 22
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=34.71 E-value=42 Score=26.20 Aligned_cols=21 Identities=19% Similarity=-0.031 Sum_probs=13.7
Q ss_pred CcEEEEecCCCCCCHHHHHHHH
Q 014784 314 DSCVVTRSNFKYWTLTQQLAHH 335 (418)
Q Consensus 314 ng~~~q~~~t~~~~~~~lIa~~ 335 (418)
||+.++-... --++.+|++.+
T Consensus 26 NGe~~el~~~-~~Tv~dLL~~L 46 (87)
T 1tyg_B 26 NGKDVKWKKD-TGTIQDLLASY 46 (87)
T ss_dssp TTEEECCSSS-CCBHHHHHHHT
T ss_pred CCEEEECCCC-CCcHHHHHHHh
Confidence 8886653221 14889999985
No 23
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=32.04 E-value=30 Score=26.34 Aligned_cols=20 Identities=15% Similarity=0.062 Sum_probs=13.8
Q ss_pred CcEEEEec--CCCCCCHHHHHHHH
Q 014784 314 DSCVVTRS--NFKYWTLTQQLAHH 335 (418)
Q Consensus 314 ng~~~q~~--~t~~~~~~~lIa~~ 335 (418)
||+.++-. . --++.++++.+
T Consensus 6 NGe~~e~~~~~--~~Tl~~LL~~l 27 (78)
T 2k5p_A 6 NGKPSTVDGAE--SLNVTELLSAL 27 (78)
T ss_dssp TTEEEECSSCS--CEEHHHHHHHH
T ss_pred CCEEEEcCCCC--CCcHHHHHHHc
Confidence 88877643 2 23789999885
No 24
>2k9x_A Tburm1, uncharacterized protein; unknown function; NMR {Trypanosoma brucei}
Probab=26.99 E-value=40 Score=27.49 Aligned_cols=62 Identities=24% Similarity=0.139 Sum_probs=34.1
Q ss_pred CCCHHHHHHHHHhcceecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEE
Q 014784 325 YWTLTQQLAHHTINGCNLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTF 393 (418)
Q Consensus 325 ~~~~~~lIa~~~S~~~tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~ 393 (418)
-+++.++|.|+..++..+ -.+++..+-+ ..+++| +-+-++|.. .++-++-..-|++||+|.+
T Consensus 34 ~~TV~dLl~~L~~~~~~~-r~~lf~~~g~---~~lrpg--IlVLVNg~d-~e~l~gldt~L~dgD~V~f 95 (110)
T 2k9x_A 34 GTNLNGLVQLLKTNYVKE-RPDLLVDQTG---QTLRPG--ILVLVNSCD-AEVVGGMDYVLNDGDTVEF 95 (110)
T ss_dssp GCCHHHHHHHHTTTTCCS-CHHHHBCSSS---SSBCTT--EEEEESSSB-HHHHTSSCCCCCSSCEEEE
T ss_pred CccHHHHHHHHHHHcccc-chhhEecCCC---cccCCC--eEEEECCee-eeccCCcccCCCCcCEEEE
Confidence 368999999985555455 3344432211 023445 334455532 2211223466999999877
No 25
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.69 E-value=69 Score=26.29 Aligned_cols=15 Identities=13% Similarity=0.284 Sum_probs=13.1
Q ss_pred CCccCCCCCEEEEEE
Q 014784 381 TRKFLEDGDEVTFTG 395 (418)
Q Consensus 381 ~~~~L~~GD~V~~~~ 395 (418)
...|+++||.|.++-
T Consensus 50 k~IwI~~GD~VlVe~ 64 (111)
T 2dgy_A 50 KNIWIKRGDFLIVDP 64 (111)
T ss_dssp SCCCCCSSCEEEEEE
T ss_pred ccEEEcCCCEEEEEe
Confidence 468999999999984
No 26
>1kl9_A Eukaryotic translation initiation factor 2 subuni; OB fold, helical domain; 1.90A {Homo sapiens} SCOP: a.60.14.1 b.40.4.5
Probab=25.85 E-value=34 Score=30.43 Aligned_cols=63 Identities=14% Similarity=0.126 Sum_probs=37.1
Q ss_pred cCCCCEEEcCCCCCCcCCCCCceEEEE----ecCcccee-cCCC----CCccCCCCCEEEEEEE-EecCCceEeee
Q 014784 342 LRSGDLLGTGTISGPEPESLGCLLELT----WNGQKPLS-LDGF----TRKFLEDGDEVTFTGF-CKGNGYTVGFG 407 (418)
Q Consensus 342 L~pGDvI~TGTp~Gvg~~~~G~~le~~----~~G~~~l~-~~~~----~~~~L~~GD~V~~~~~-~~~~~~~~~~G 407 (418)
++.||+ ..||..++.. -|+.+++. ++|.-.++ +... +..+++.||+|++.+. ++...++|.|+
T Consensus 13 p~~G~i-v~G~V~~I~~--fGaFV~L~e~~g~eGLvhiSels~~~v~~~~~~~~vGd~V~VkVl~vD~~~~rI~LS 85 (182)
T 1kl9_A 13 PEVEDV-VMVNVRSIAE--MGAYVSLLEYNNIEGMILLSELSRRRIRSINKLIRIGRNECVVVIRVDKEKGYIDLS 85 (182)
T ss_dssp CCTTCE-EEEEEEEECS--SEEEEEETTTTTEEEEEEGGGC------------CTTCEEEEEEEEEETTTTEEEEE
T ss_pred CCCCCE-EEEEEEEEec--cEEEEEEccCCCcEEEEEHHHCCCcccCCHHHhcCCCCEEEEEEEEEECCCCEEEEE
Confidence 478997 5889888764 48888872 45554443 4322 5678999999999853 12345666664
No 27
>3esi_A Uncharacterized protein; protein from erwinia carotovora subsp. atroseptica (pectobacterium atrosepticum), structural genomics; 2.50A {Pectobacterium atrosepticum}
Probab=24.19 E-value=73 Score=26.69 Aligned_cols=26 Identities=8% Similarity=0.169 Sum_probs=19.9
Q ss_pred CccCCCCCEEEEEEEEecCCceEeee
Q 014784 382 RKFLEDGDEVTFTGFCKGNGYTVGFG 407 (418)
Q Consensus 382 ~~~L~~GD~V~~~~~~~~~~~~~~~G 407 (418)
.+...|||++++++.+....+.++|-
T Consensus 75 ~~~V~PGD~l~l~v~~~~~~~~l~F~ 100 (129)
T 3esi_A 75 QQPILPGKTLRLVLIWHAGKQSLTFS 100 (129)
T ss_dssp CSCCCTTCEEEEEEEEETTTTEEEEE
T ss_pred CcccCCCCEEEEEEEEEecCCcEEEE
Confidence 46788999999998877666666654
No 28
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=21.47 E-value=47 Score=27.99 Aligned_cols=37 Identities=30% Similarity=0.424 Sum_probs=25.2
Q ss_pred ecCCCCEEEcCCCCCCcCCCCCceEEEEecCccceecCCCCCccCCCCCEEEEE
Q 014784 341 NLRSGDLLGTGTISGPEPESLGCLLELTWNGQKPLSLDGFTRKFLEDGDEVTFT 394 (418)
Q Consensus 341 tL~pGDvI~TGTp~Gvg~~~~G~~le~~~~G~~~l~~~~~~~~~L~~GD~V~~~ 394 (418)
.|+|||||+.++. |+ .++-+.++ ..+++..|+.|.+.
T Consensus 89 ~~~pGDlvff~~~-~~------~HVgIy~G----------~g~~ihag~~V~i~ 125 (142)
T 3gt2_A 89 QARKGDLIFYGPE-GT------QSVAMYLG----------NNQMLEVGDVVQVS 125 (142)
T ss_dssp GCCTTCEEEESGG-GC------SEEEEEEE----------TTEEEEESSBEEEE
T ss_pred hCCCCCEEEeCCC-CC------CEEEEEec----------CCEEEeCCCcEEEE
Confidence 6899999999763 22 24445443 34677788888776
No 29
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=20.91 E-value=64 Score=24.67 Aligned_cols=17 Identities=24% Similarity=0.325 Sum_probs=13.0
Q ss_pred CccCCCCCEEEEEEEEe
Q 014784 382 RKFLEDGDEVTFTGFCK 398 (418)
Q Consensus 382 ~~~L~~GD~V~~~~~~~ 398 (418)
-.=|++||.|++++.-.
T Consensus 51 l~~lk~Gd~V~F~~~~~ 67 (80)
T 2qcp_X 51 MSEIKTGDKVAFNFVQQ 67 (80)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEEe
Confidence 35689999999986533
No 30
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=20.62 E-value=64 Score=25.16 Aligned_cols=17 Identities=24% Similarity=0.325 Sum_probs=13.0
Q ss_pred CccCCCCCEEEEEEEEe
Q 014784 382 RKFLEDGDEVTFTGFCK 398 (418)
Q Consensus 382 ~~~L~~GD~V~~~~~~~ 398 (418)
-.=||+||.|++++.-.
T Consensus 59 l~~lk~Gd~V~F~~~~~ 75 (88)
T 2vb2_X 59 MSEIKTGDKVAFNFVQQ 75 (88)
T ss_dssp ECCCCTTCEEEEEEEEE
T ss_pred hhcCCCCCEEEEEEEEe
Confidence 35689999999986533
No 31
>1s4k_A Putative cytoplasmic protein YDIL; structural genomics, MCSG, PSI, PROT structure initiative; 1.90A {Salmonella typhimurium} SCOP: a.35.1.6
Probab=20.38 E-value=40 Score=28.12 Aligned_cols=25 Identities=24% Similarity=0.340 Sum_probs=20.7
Q ss_pred CCChhHHhhceeEEEEEEcCchhhHhhhhh
Q 014784 219 PIDVNEAADHIFGVMLMNDWSARDIQAWEY 248 (418)
Q Consensus 219 ~v~~eeA~~~I~Gyti~ND~SaRD~Q~~~~ 248 (418)
..+.+||..+|. +|++.|.||.||.
T Consensus 16 gLt~~EaA~~i~-----~~vs~rtWQqWE~ 40 (120)
T 1s4k_A 16 DMTIEECTIYIT-----QDNNSATWQRWEA 40 (120)
T ss_dssp TCCHHHHHHHTS-----SSCCHHHHHHHHH
T ss_pred CCCHHHHHHHHh-----ccCCHHHHHHHHC
Confidence 377888887775 5899999999985
Done!