Query 014786
Match_columns 418
No_of_seqs 361 out of 3361
Neff 7.5
Searched_HMMs 29240
Date Mon Mar 25 17:48:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014786.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014786hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qo6_A Protease DO-like 1, chl 100.0 1.5E-55 5.2E-60 439.9 29.5 309 109-417 10-318 (348)
2 3stj_A Protease DEGQ; serine p 100.0 3.1E-51 1.1E-55 407.9 30.1 286 117-417 14-319 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 1.8E-49 6E-54 407.1 33.5 287 116-417 13-319 (436)
4 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.6E-49 5.5E-54 408.6 26.2 286 116-417 19-338 (451)
5 1te0_A Protease DEGS; two doma 100.0 3.4E-48 1.2E-52 382.2 28.9 284 116-417 9-300 (318)
6 4fln_A Protease DO-like 2, chl 100.0 5.3E-48 1.8E-52 401.7 29.9 276 124-417 45-342 (539)
7 1ky9_A Protease DO, DEGP, HTRA 100.0 6.2E-48 2.1E-52 396.5 22.5 286 117-417 14-342 (448)
8 1y8t_A Hypothetical protein RV 100.0 5E-46 1.7E-50 367.6 30.0 274 116-417 6-298 (324)
9 1lcy_A HTRA2 serine protease; 100.0 3.9E-46 1.3E-50 368.6 24.8 278 116-417 15-309 (325)
10 3num_A Serine protease HTRA1; 100.0 1.2E-45 4.2E-50 366.0 19.7 282 111-416 9-306 (332)
11 1l1j_A Heat shock protease HTR 100.0 1.1E-38 3.9E-43 301.9 17.8 220 116-336 4-239 (239)
12 3sti_A Protease DEGQ; serine p 100.0 1.1E-37 3.7E-42 296.0 17.1 213 117-333 14-241 (245)
13 3lgi_A Protease DEGS; stress-s 100.0 1.1E-35 3.8E-40 281.0 21.3 213 115-334 19-234 (237)
14 3tjo_A Serine protease HTRA1; 100.0 4E-34 1.4E-38 269.4 18.0 204 112-325 27-230 (231)
15 3k6y_A Serine protease, possib 100.0 8.1E-31 2.8E-35 247.4 23.8 198 116-330 31-231 (237)
16 2w5e_A Putative serine proteas 99.9 2E-23 7E-28 185.7 18.7 137 150-312 19-155 (163)
17 2as9_A Serine protease; trypsi 99.9 1.5E-22 5.1E-27 187.3 14.4 179 126-325 2-203 (210)
18 1agj_A Epidermolytic toxin A; 99.9 1.5E-21 5E-26 184.2 14.5 161 151-323 54-240 (242)
19 2w7s_A Serine protease SPLA; h 99.8 1.5E-20 5E-25 172.1 10.7 155 152-323 22-197 (200)
20 2h5c_A Alpha-lytic protease; s 99.8 6.9E-20 2.4E-24 168.1 14.9 158 153-320 17-191 (198)
21 2o8l_A V8 protease, taphylococ 99.8 5.8E-19 2E-23 169.9 18.8 158 151-325 33-211 (274)
22 1wcz_A Glutamyl endopeptidase; 99.8 1.1E-18 3.7E-23 167.5 17.3 158 151-325 33-211 (268)
23 2vid_A Serine protease SPLB; h 99.8 5.2E-19 1.8E-23 161.8 14.2 157 152-324 22-202 (204)
24 1qtf_A Exfoliative toxin B; se 99.8 1.6E-19 5.4E-24 171.0 10.6 144 151-317 47-216 (246)
25 1hpg_A Glutamic acid specific 99.8 3.3E-18 1.1E-22 155.5 16.0 159 152-320 12-182 (187)
26 2qa9_E Streptogrisin-B; chymot 99.8 2.9E-18 1E-22 155.2 13.0 163 151-321 11-181 (185)
27 2oua_A Serine protease, protei 99.8 6.6E-18 2.3E-22 153.7 14.3 155 152-319 14-181 (188)
28 2l97_A HTRA, putative serine p 99.7 2.4E-18 8.2E-23 148.1 9.3 101 305-417 2-112 (134)
29 2ea3_A Chymotrypsin; celloulom 99.7 6.1E-17 2.1E-21 147.4 13.0 151 153-320 17-176 (189)
30 2pfe_A Protease A, alkaline se 99.7 3.4E-17 1.2E-21 148.6 9.6 153 153-320 15-179 (186)
31 2sga_A Proteinase A; hydrolase 99.7 6.1E-17 2.1E-21 146.0 9.1 155 151-320 11-176 (181)
32 1mbm_A NSP4 proteinase, chymot 99.7 1.8E-16 6.1E-21 140.4 11.4 116 150-297 13-131 (198)
33 3fan_A Non-structural protein; 99.5 6.4E-15 2.2E-19 132.6 7.9 117 151-297 29-145 (213)
34 1pq7_A Trypsin; ultra-high res 99.5 1.3E-12 4.5E-17 121.1 20.3 169 152-322 24-222 (224)
35 2zch_P Prostate-specific antig 99.5 3.6E-12 1.2E-16 119.1 19.9 172 151-325 23-234 (237)
36 1azz_A Collagenase; complex (s 99.5 3.2E-12 1.1E-16 118.9 19.4 171 151-324 23-222 (226)
37 2xw9_A Complement factor D; im 99.5 6.7E-12 2.3E-16 116.5 21.6 171 152-324 24-227 (228)
38 1fuj_A PR3, myeloblastin; hydr 99.5 8.2E-12 2.8E-16 115.3 21.8 163 152-324 27-220 (221)
39 1gvz_A Kallikrein-1E2; antigen 99.5 3.7E-12 1.3E-16 119.0 19.4 169 152-325 24-234 (237)
40 2aiq_A Protein C activator; sn 99.5 4.4E-12 1.5E-16 118.2 19.6 172 152-326 23-223 (231)
41 1a7s_A Heparin binding protein 99.5 7.5E-12 2.6E-16 116.0 20.9 165 151-326 23-219 (225)
42 1cgh_A Cathepsin G; inflammati 99.4 7.7E-12 2.6E-16 116.0 20.7 167 152-325 27-223 (224)
43 1fxy_A Coagulation factor XA-t 99.4 6.1E-12 2.1E-16 117.0 19.7 171 151-325 24-225 (228)
44 1npm_A Neuropsin; serine prote 99.4 3.6E-12 1.2E-16 118.3 18.1 167 152-323 24-223 (225)
45 1ao5_A Glandular kallikrein-13 99.4 6E-12 2E-16 117.6 19.4 169 152-325 24-234 (237)
46 1mza_A Pro-granzyme K; apoptos 99.4 1.7E-11 5.9E-16 114.7 22.5 171 151-324 25-234 (240)
47 2z7f_E Leukocyte elastase; ser 99.4 8.3E-12 2.8E-16 115.2 20.1 164 151-324 23-217 (218)
48 1lo6_A Kallikrein 6, HK6; seri 99.4 1E-11 3.4E-16 115.2 20.7 169 152-325 24-221 (223)
49 1bru_P Elastase, PPE; serine p 99.4 1.9E-11 6.5E-16 114.6 22.6 173 152-325 28-239 (241)
50 1ton_A Tonin; hydrolase(serine 99.4 7.5E-12 2.5E-16 116.8 19.7 169 152-325 22-232 (235)
51 1eq9_A Chymotrypsin; FIRE ANT, 99.4 9.8E-12 3.3E-16 115.1 20.1 168 152-324 24-220 (222)
52 4e7n_A Snake-venom thrombin-li 99.4 1.3E-11 4.6E-16 114.9 21.2 174 151-327 25-231 (238)
53 4ag1_A Chymase; hydrolase-de n 99.4 2.7E-11 9.1E-16 112.2 22.8 168 151-325 27-224 (226)
54 3s69_A Thrombin-like enzyme de 99.4 1.4E-11 4.7E-16 114.5 20.9 174 151-327 23-227 (234)
55 3mfj_A Cationic trypsin; serin 99.4 1E-11 3.6E-16 115.1 19.4 168 152-325 23-221 (223)
56 2psx_A Kallikrein-5; zinc inhi 99.4 1.5E-11 5E-16 114.4 20.4 170 151-325 24-224 (227)
57 1elt_A Elastase; serine protei 99.4 1.1E-11 3.9E-16 115.6 19.8 170 152-322 28-234 (236)
58 1iau_A Granzyme B; hydrolase-h 99.4 1.5E-11 5E-16 114.3 20.4 167 152-325 27-225 (227)
59 3s9c_A Vipera russelli protein 99.4 1.8E-11 6.1E-16 113.8 21.0 172 152-328 26-228 (234)
60 3h7t_A Group 3 allergen smipp- 99.4 7.5E-12 2.6E-16 116.2 18.3 172 151-326 23-230 (235)
61 2bdg_A Kallikrein-4; serine pr 99.4 9.2E-12 3.1E-16 115.5 18.8 169 151-324 23-221 (223)
62 1gvk_B Elastase 1, peptide inh 99.4 1.1E-11 3.7E-16 116.1 19.4 173 152-325 28-238 (240)
63 2qxi_A Kallikrein-7; S1 pocket 99.4 7.7E-12 2.6E-16 116.1 17.7 168 153-325 25-221 (224)
64 1hj8_A Trypsin I; hydrolase, r 99.4 1.3E-11 4.6E-16 114.3 19.3 168 152-325 23-220 (222)
65 1spj_A Kallikrein 1; serine pr 99.4 1.7E-11 5.8E-16 114.5 19.9 169 152-325 24-235 (238)
66 1si5_H Scatter factor, hepatoc 99.4 6.3E-11 2.2E-15 110.9 23.7 174 151-326 22-228 (240)
67 2zgc_A Granzyme M; serine prot 99.4 3.4E-11 1.2E-15 112.9 21.9 174 152-326 24-230 (240)
68 1orf_A Granzyme A; hydrolase-h 99.4 4E-11 1.4E-15 111.8 21.9 171 151-324 23-230 (234)
69 3rp2_A RAT MAST cell protease 99.4 3E-11 1E-15 111.6 20.8 182 126-324 12-223 (224)
70 4i8h_A Cationic trypsin, beta- 99.4 2.2E-11 7.5E-16 112.5 19.7 169 151-325 22-221 (223)
71 3gov_B MAsp-1; complement, ser 99.4 4.6E-11 1.6E-15 111.9 22.0 171 151-324 24-247 (251)
72 1m9u_A Earthworm fibrinolytic 99.4 1.6E-11 5.6E-16 114.8 18.9 170 152-322 27-239 (241)
73 1p3c_A Glutamyl-endopeptidase; 99.4 1.3E-12 4.4E-17 120.3 11.0 159 151-323 29-212 (215)
74 1sgf_A 7S NGF, nerve growth fa 99.4 9E-12 3.1E-16 116.7 16.5 169 152-325 27-237 (240)
75 2asu_B Hepatocyte growth facto 99.4 3.4E-11 1.2E-15 112.4 20.1 173 151-325 21-226 (234)
76 2hlc_A Collagenase; serine pro 99.4 3.3E-11 1.1E-15 112.0 19.9 172 151-324 27-226 (230)
77 3fzz_A Granzyme C; hydrolase, 99.4 6.8E-11 2.3E-15 109.4 21.7 167 152-325 28-226 (227)
78 1euf_A Duodenase; serine prote 99.4 6E-11 2E-15 110.2 21.3 167 152-325 27-224 (227)
79 3mhw_U Urokinase-type plasmino 99.4 6.5E-11 2.2E-15 110.7 21.5 171 152-324 29-245 (247)
80 1aut_C Activated protein C; se 99.4 3E-11 1E-15 113.9 19.1 174 151-326 24-240 (250)
81 3ncl_A Suppressor of tumorigen 99.4 5.6E-11 1.9E-15 110.8 20.7 170 152-323 25-238 (241)
82 3tvj_B Mannan-binding lectin s 99.4 3.3E-11 1.1E-15 112.3 19.0 174 151-325 21-240 (242)
83 2any_A Kininogenin, plasma kal 99.4 6.6E-11 2.2E-15 110.7 20.8 172 152-325 27-236 (241)
84 1pyt_D TC, PCPA-TC, chymotryps 99.4 9.3E-11 3.2E-15 110.5 21.7 172 152-324 41-249 (251)
85 2oq5_A Transmembrane protease, 99.4 1.5E-10 5.2E-15 107.6 22.8 170 152-323 24-229 (232)
86 2r0l_A Hepatocyte growth facto 99.3 9.2E-11 3.1E-15 110.1 21.4 173 152-326 23-240 (248)
87 2olg_A Pro-phenoloxidase activ 99.3 1E-10 3.4E-15 111.9 21.8 170 152-323 51-275 (278)
88 3h7o_A Group 3 allergen smipp- 99.3 2.3E-11 7.7E-16 112.6 16.0 169 153-325 27-226 (228)
89 1ym0_A Fibrinotic enzyme compo 99.3 4.7E-11 1.6E-15 111.3 18.2 171 152-325 26-236 (238)
90 3beu_A Trypsin, SGT; beta shee 99.3 6.1E-11 2.1E-15 109.5 18.6 169 153-325 21-222 (224)
91 3bg8_A Coagulation factor XIA 99.3 6.5E-11 2.2E-15 110.7 19.0 172 151-324 26-235 (238)
92 2jde_A Urokinase-type plasmino 99.3 1.3E-10 4.5E-15 110.8 21.3 172 152-325 52-269 (276)
93 3gyl_B Prostasin; ENAC, zymoge 99.3 8.4E-11 2.9E-15 111.0 19.4 173 151-325 23-242 (261)
94 2f91_A Hepatopancreas trypsin; 99.3 1.3E-10 4.3E-15 108.6 20.1 167 153-322 29-234 (237)
95 1rtf_B (TC)-T-PA, two chain ti 99.3 2.5E-10 8.6E-15 107.3 21.9 171 152-324 30-250 (252)
96 1yc0_A Hepatocyte growth facto 99.3 1.5E-10 5.1E-15 111.2 20.7 173 151-325 57-274 (283)
97 2jkh_A Activated factor XA hea 99.3 5.9E-11 2E-15 111.1 17.2 174 151-326 24-234 (241)
98 1ddj_A Plasminogen; catalytic 99.3 2.9E-10 1E-14 106.8 21.8 173 151-325 41-245 (247)
99 1t8o_A Chymotrypsin A; chymotr 99.3 1.4E-10 4.7E-15 109.1 19.2 172 151-325 39-243 (245)
100 1fon_A Procarboxypeptidase A-S 99.3 2.1E-11 7.3E-16 114.0 13.5 173 152-325 26-238 (240)
101 4dgj_A Enteropeptidase catalyt 99.3 1.8E-10 6.1E-15 107.1 19.1 172 151-324 23-234 (235)
102 3rm2_H Thrombin heavy chain; s 99.3 1.5E-10 5.3E-15 108.8 18.2 172 152-325 26-255 (259)
103 1zyo_A Serine protease; beta-b 99.3 2.8E-11 9.5E-16 109.6 11.9 160 127-319 16-185 (191)
104 2qy0_B Complement C1R subcompo 99.3 1.1E-10 3.7E-15 109.1 16.4 170 152-325 22-239 (242)
105 1fiw_A Beta-acrosin heavy chai 99.3 8.3E-10 2.8E-14 106.5 22.9 173 152-326 30-250 (290)
106 2bz6_H Blood coagulation facto 99.3 2.3E-10 8E-15 107.8 18.2 174 151-326 23-241 (254)
107 2f9n_A Alpha I tryptase; serin 99.3 2E-10 7E-15 107.6 17.6 172 152-325 27-242 (245)
108 2wph_S Coagulation factor IXA 99.2 1.1E-10 3.8E-15 108.7 15.6 171 152-324 24-232 (235)
109 1z8g_A Serine protease hepsin; 99.2 6.8E-10 2.3E-14 111.0 20.9 173 151-325 140-360 (372)
110 2pzd_A Serine protease HTRA2; 99.2 1.2E-11 4.2E-16 102.5 6.5 77 327-417 1-88 (113)
111 2bdy_A Thrombin; thrombin, com 99.2 5.2E-10 1.8E-14 107.7 18.0 173 151-325 55-285 (289)
112 4f4o_C Haptoglobin; globin fol 99.2 2.5E-10 8.7E-15 113.1 16.0 172 151-325 125-345 (347)
113 3f1s_B Vitamin K-dependent pro 99.2 1.9E-10 6.6E-15 110.6 14.7 186 125-326 63-277 (283)
114 1zjk_A Mannan-binding lectin s 99.2 7.8E-10 2.7E-14 111.5 19.6 172 153-325 184-401 (403)
115 2vnt_A Urokinase-type plasmino 99.2 2.9E-09 1E-13 101.3 21.1 189 126-325 35-269 (276)
116 2p3w_A Probable serine proteas 99.2 3E-11 1E-15 100.0 5.9 77 327-417 1-88 (112)
117 2b9l_A Prophenoloxidase activa 99.1 5.9E-10 2E-14 112.3 16.2 175 151-327 161-385 (394)
118 3cp7_A Alkaline serine proteas 99.1 3E-10 1E-14 105.2 12.8 137 152-299 21-192 (218)
119 3h5c_B Vitamin K-dependent pro 99.1 8.6E-10 2.9E-14 107.6 16.4 171 151-324 117-316 (317)
120 1md8_A C1R complement serine p 99.1 1.8E-09 6.3E-14 106.0 17.7 169 152-324 111-327 (329)
121 1arb_A Achromobacter protease 99.1 3.5E-10 1.2E-14 108.1 12.0 148 123-299 19-214 (268)
122 2xxl_A GRAM-positive specific 99.1 4.2E-09 1.4E-13 106.6 20.1 174 152-326 146-374 (408)
123 1elv_A Complement C1S componen 99.1 2.7E-09 9.3E-14 104.8 17.8 169 153-326 104-326 (333)
124 2vz5_A TAX1-binding protein 3; 99.1 1.8E-10 6.1E-15 99.3 7.9 84 322-417 28-121 (139)
125 1uit_A Human discs large 5 pro 99.1 8.1E-11 2.8E-15 98.2 5.6 82 323-417 6-98 (117)
126 2i4s_A General secretion pathw 99.1 8.5E-11 2.9E-15 96.3 5.1 89 314-417 5-93 (105)
127 3nxp_A Prethrombin-1; alloster 99.1 1.1E-09 3.7E-14 111.4 13.5 173 151-325 190-420 (424)
128 2eaq_A LIM domain only protein 99.1 1.7E-10 5.8E-15 91.4 5.8 69 331-417 16-86 (90)
129 1gpz_A Complement C1R componen 99.0 4.7E-09 1.6E-13 105.5 17.6 170 152-325 179-396 (399)
130 4dur_A Plasminogen, serine pro 99.0 1.7E-08 5.9E-13 109.8 20.3 173 151-325 585-789 (791)
131 1rrk_A Complement factor B; BB 98.9 5.2E-09 1.8E-13 107.9 13.1 178 151-329 241-494 (497)
132 2f83_A Coagulation factor XI; 98.9 1.4E-08 4.7E-13 108.2 16.2 172 151-324 413-622 (625)
133 3hrz_D Complement factor B; se 98.9 4.5E-09 1.5E-13 113.7 12.7 176 151-327 483-734 (741)
134 3sfj_A TAX1-binding protein 3; 98.9 1.6E-09 5.4E-14 88.1 6.9 77 329-417 16-102 (104)
135 2w4f_A Protein LAP4; structura 98.9 1.9E-09 6.6E-14 86.4 6.8 76 331-417 13-90 (97)
136 2kjp_A Uncharacterized protein 98.9 7.9E-10 2.7E-14 88.2 4.2 56 350-417 1-56 (91)
137 2xrc_A Human complement factor 98.9 1.8E-08 6.2E-13 106.0 15.3 171 152-325 345-556 (565)
138 3i18_A LMO2051 protein; alpha- 98.9 3.8E-09 1.3E-13 85.6 7.6 56 350-417 7-62 (100)
139 2fcf_A Multiple PDZ domain pro 98.9 4E-09 1.4E-13 85.5 7.6 75 330-417 14-96 (103)
140 2pkt_A PDZ and LIM domain prot 98.9 4.8E-09 1.6E-13 83.2 7.5 69 332-417 13-83 (91)
141 2i6v_A General secretion pathw 98.9 2.6E-09 8.8E-14 84.3 5.6 57 350-417 19-75 (87)
142 2eeh_A PDZ domain-containing p 98.8 2.4E-09 8.2E-14 86.6 5.3 69 331-417 21-91 (100)
143 1w9e_A Syntenin 1; cell adhesi 98.8 3.6E-09 1.2E-13 93.5 6.8 69 330-416 14-83 (166)
144 2i04_A Membrane-associated gua 98.8 8.1E-09 2.8E-13 80.7 7.9 57 350-417 25-84 (85)
145 3tsv_A Tight junction protein 98.8 8E-09 2.7E-13 87.1 8.2 69 332-417 39-109 (124)
146 2e7k_A Maguk P55 subfamily mem 98.8 5.3E-09 1.8E-13 83.2 6.7 67 331-417 17-85 (91)
147 2jil_A GRIP1 protein, glutamat 98.8 6.5E-09 2.2E-13 83.4 7.2 73 332-417 14-89 (97)
148 2yt7_A Amyloid beta A4 precurs 98.8 6.9E-09 2.4E-13 84.1 7.3 73 332-417 21-96 (101)
149 2pa1_A PDZ and LIM domain prot 98.8 8.9E-09 3E-13 80.9 7.7 69 332-417 12-82 (87)
150 2dls_A PDZ-rhogef, RHO guanine 98.8 6.8E-09 2.3E-13 82.8 7.0 56 350-417 29-84 (93)
151 2kl1_A YLBL protein; structure 98.8 3.8E-09 1.3E-13 84.7 5.4 56 350-417 5-60 (94)
152 2vsp_A PDZ domain-containing p 98.8 7E-09 2.4E-13 82.3 6.7 67 333-417 15-83 (91)
153 1wh1_A KIAA1095 protein; PDZ d 98.8 4.7E-09 1.6E-13 88.4 5.7 73 331-417 31-104 (124)
154 2iwq_A Multiple PDZ domain pro 98.8 9.1E-09 3.1E-13 86.6 7.4 75 330-417 34-116 (123)
155 1x5q_A LAP4 protein; PDZ domai 98.8 7.4E-09 2.5E-13 85.1 6.7 76 331-417 25-102 (110)
156 3id1_A Regulator of sigma E pr 98.8 1.1E-08 3.8E-13 82.1 7.3 54 353-417 5-58 (95)
157 2odp_A Complement C2; C3/C5 co 98.8 1.4E-08 4.9E-13 105.1 9.6 174 151-325 246-501 (509)
158 2he4_A Na(+)/H(+) exchange reg 98.8 1.3E-08 4.6E-13 80.4 7.2 67 333-417 16-84 (90)
159 2uzc_A Human pdlim5, PDZ and L 98.8 2.1E-08 7.2E-13 78.8 8.0 68 333-417 14-83 (88)
160 1wif_A RSGI RUH-020, riken cDN 98.8 9.1E-09 3.1E-13 87.1 6.1 57 350-417 49-108 (126)
161 2rcz_A Tight junction protein 98.7 1.9E-08 6.4E-13 77.5 7.4 61 344-417 12-78 (81)
162 2ejy_A 55 kDa erythrocyte memb 98.7 1.2E-08 4E-13 82.4 6.4 67 332-417 24-93 (97)
163 1v5q_A GRIP1 homolog, glutamat 98.7 1.2E-08 4.2E-13 85.6 6.7 57 350-417 45-104 (122)
164 3mmg_A Nuclear inclusion prote 98.7 3.5E-07 1.2E-11 84.6 16.8 162 124-313 13-182 (241)
165 2v90_A PDZ domain-containing p 98.7 1.8E-08 6.2E-13 80.6 7.3 70 333-417 15-86 (96)
166 2jxo_A Ezrin-radixin-moesin-bi 98.7 1.4E-08 4.8E-13 81.6 6.4 67 333-416 21-89 (98)
167 3e17_A Tight junction protein 98.7 1.7E-08 5.8E-13 79.7 6.7 55 350-417 21-78 (88)
168 1v5l_A PDZ and LIM domain 3; a 98.7 8.8E-09 3E-13 83.7 5.2 69 332-417 15-85 (103)
169 1wi2_A Riken cDNA 2700099C19; 98.7 2E-08 6.7E-13 81.8 7.0 68 332-417 27-96 (104)
170 1ueq_A Membrane associated gua 98.7 3.1E-08 1.1E-12 83.2 8.2 57 350-417 44-103 (123)
171 2kom_A Partitioning defective 98.7 3.1E-08 1.1E-12 83.0 8.1 73 333-417 42-117 (121)
172 3qik_A Phosphatidylinositol 3, 98.7 1.3E-08 4.5E-13 82.3 5.5 56 350-416 39-97 (101)
173 3cyy_A Tight junction protein 98.7 2.8E-08 9.7E-13 78.6 7.4 60 345-417 15-80 (92)
174 1uep_A Membrane associated gua 98.7 1.4E-08 4.9E-13 82.5 5.7 71 332-417 20-93 (103)
175 2q3g_A PDZ and LIM domain prot 98.7 4.3E-08 1.5E-12 77.3 8.2 69 332-417 13-83 (89)
176 3r68_A Na(+)/H(+) exchange reg 98.7 3.4E-08 1.2E-12 78.7 7.5 67 333-417 17-85 (95)
177 1vb7_A PDZ and LIM domain 2; P 98.7 1.3E-08 4.4E-13 81.3 4.9 69 332-417 16-86 (94)
178 2jre_A C60-1 PDZ domain peptid 98.7 2.8E-08 9.5E-13 81.3 7.1 73 332-417 25-101 (108)
179 2qkv_A Inactivation-NO-after-p 98.7 2.1E-08 7.1E-13 80.5 6.0 65 333-417 21-88 (96)
180 3khf_A Microtubule-associated 98.7 2.6E-08 8.9E-13 80.1 6.6 55 350-417 34-90 (99)
181 1ihj_A INAD; intermolecular di 98.7 2.6E-08 9E-13 79.9 6.4 55 350-417 37-94 (98)
182 2ego_A General receptor for ph 98.7 3.7E-08 1.3E-12 78.9 7.2 55 350-417 37-93 (96)
183 1y7n_A Amyloid beta A4 precurs 98.7 3.9E-08 1.3E-12 78.1 7.2 53 351-417 33-87 (90)
184 3ngh_A PDZ domain-containing p 98.7 2.6E-08 8.9E-13 81.2 6.3 55 350-417 26-82 (106)
185 2o2t_A Multiple PDZ domain pro 98.7 3.1E-08 1.1E-12 82.2 6.9 72 332-417 32-107 (117)
186 1ujd_A KIAA0559 protein; PDZ d 98.7 2.5E-08 8.5E-13 83.0 6.1 79 326-417 24-106 (117)
187 1n7e_A AMPA receptor interacti 98.7 7E-08 2.4E-12 77.3 8.5 68 333-417 17-87 (97)
188 2koj_A Partitioning defective 98.7 5.4E-08 1.9E-12 80.0 7.7 74 332-417 22-98 (111)
189 3kzd_A TIAM-1, T-lymphoma inva 98.6 5.3E-08 1.8E-12 78.0 7.3 67 332-416 20-88 (94)
190 2q9v_A Membrane-associated gua 98.6 2.1E-08 7.3E-13 79.1 5.0 70 333-417 14-86 (90)
191 2iwn_A Multiple PDZ domain pro 98.6 8.8E-08 3E-12 76.4 8.6 73 332-417 15-90 (97)
192 1qau_A Neuronal nitric oxide s 98.6 6E-08 2E-12 79.8 7.8 69 332-417 13-84 (112)
193 2la8_A Inactivation-NO-after-p 98.6 2.1E-08 7.1E-13 82.2 4.9 55 350-417 25-82 (106)
194 1rgw_A ZAsp protein; PDZ, cyph 98.6 5.7E-08 2E-12 75.7 7.3 68 333-417 12-81 (85)
195 2h2b_A Tight junction protein 98.6 4.4E-08 1.5E-12 79.9 6.9 56 350-417 39-94 (107)
196 1kwa_A Hcask/LIN-2 protein; PD 98.6 7.6E-08 2.6E-12 75.9 7.9 67 332-417 13-82 (88)
197 1m5z_A GRIP, AMPA receptor int 98.6 3.6E-08 1.2E-12 78.0 6.0 55 350-417 32-88 (91)
198 3bpu_A Membrane-associated gua 98.6 6.8E-08 2.3E-12 75.9 7.5 67 333-417 15-83 (88)
199 2hga_A Conserved protein MTH13 98.6 7.4E-08 2.5E-12 81.3 8.1 55 350-416 25-79 (125)
200 1uez_A KIAA1526 protein; PDZ d 98.6 1.9E-08 6.7E-13 81.3 4.3 70 332-417 21-90 (101)
201 2zpm_A Regulator of sigma E pr 98.6 3.3E-08 1.1E-12 78.2 5.4 54 352-417 6-59 (91)
202 2dmz_A INAD-like protein; PDZ 98.6 2.9E-08 9.8E-13 84.0 5.3 73 332-417 27-103 (129)
203 1d5g_A Human phosphatase HPTP1 98.6 9.2E-08 3.1E-12 76.4 8.0 55 350-417 33-90 (96)
204 1q3o_A Shank1; PDZ, GKAP, pept 98.6 6.4E-08 2.2E-12 79.4 7.2 55 350-417 45-101 (109)
205 2eno_A Synaptojanin-2-binding 98.6 5.2E-08 1.8E-12 81.4 6.8 73 332-417 28-104 (120)
206 2gzv_A PRKCA-binding protein; 98.6 9.8E-08 3.3E-12 79.2 8.3 70 331-417 35-107 (114)
207 1va8_A Maguk P55 subfamily mem 98.6 8.3E-08 2.8E-12 79.3 7.8 65 333-417 38-105 (113)
208 2edz_A PDZ domain-containing p 98.6 5.1E-08 1.7E-12 80.7 6.4 55 350-417 38-94 (114)
209 2vsv_A Rhophilin-2; scaffold p 98.6 8.4E-08 2.9E-12 79.0 7.5 56 350-417 44-101 (109)
210 2f5y_A Regulator of G-protein 98.6 1E-07 3.5E-12 75.5 7.7 55 350-417 24-80 (91)
211 1wfg_A Regulating synaptic mem 98.6 6.5E-08 2.2E-12 82.3 7.0 74 332-417 48-124 (131)
212 1uew_A Membrane associated gua 98.6 6E-08 2.1E-12 80.2 6.4 54 351-417 44-100 (114)
213 3o46_A Maguk P55 subfamily mem 98.6 1.2E-07 4.2E-12 75.3 7.8 67 333-417 16-85 (93)
214 2vwr_A Ligand of NUMB protein 98.6 4.8E-08 1.6E-12 78.0 5.4 67 333-417 17-86 (95)
215 2d90_A PDZ domain containing p 98.6 6.7E-08 2.3E-12 78.2 6.3 67 333-417 18-86 (102)
216 1p1d_A PDZ45, glutamate recept 98.6 6.7E-08 2.3E-12 87.6 7.0 75 332-417 18-95 (196)
217 1nf3_C PAR-6B; semi-CRIB motif 98.6 4.2E-08 1.4E-12 83.0 5.2 72 333-417 43-122 (128)
218 1qav_A Alpha-1 syntrophin (res 98.6 9.4E-08 3.2E-12 75.4 6.8 69 332-417 16-87 (90)
219 2kpk_A Membrane-associated gua 98.6 8.7E-08 3E-12 81.1 7.0 57 350-417 43-102 (129)
220 1tp5_A Presynaptic density pro 98.6 9.5E-08 3.2E-12 79.5 7.1 69 333-417 26-95 (119)
221 2kv8_A RGS12, regulator of G-p 98.6 6.2E-08 2.1E-12 75.3 5.3 55 350-417 23-79 (83)
222 2eeg_A PDZ and LIM domain prot 98.6 1.1E-07 3.8E-12 75.8 6.8 55 350-417 32-88 (94)
223 2i1n_A Discs, large homolog 3; 98.6 1.4E-07 4.8E-12 76.2 7.4 73 332-417 15-91 (102)
224 1wg6_A Hypothetical protein (r 98.5 3.6E-08 1.2E-12 83.4 3.8 75 332-417 37-119 (127)
225 3rle_A Golgi reassembly-stacki 98.5 4.3E-08 1.5E-12 90.1 4.5 57 350-417 16-73 (209)
226 2r4h_A Membrane-associated gua 98.5 2.7E-07 9.3E-12 76.1 9.0 68 333-417 36-106 (112)
227 2awx_A Synapse associated prot 98.5 1.2E-07 4.1E-12 77.2 6.7 72 333-417 15-90 (105)
228 2yub_A LIMK-2, LIM domain kina 98.5 4.1E-08 1.4E-12 82.0 4.0 55 350-417 44-102 (118)
229 1yph_C Chymotrypsin A, chain B 98.5 9.8E-07 3.4E-11 74.5 12.6 84 151-236 24-127 (131)
230 1wha_A KIAA0147 protein, scrib 98.5 1E-07 3.6E-12 77.5 6.3 72 333-417 19-95 (105)
231 3qe1_A Sorting nexin-27, G pro 98.5 1.4E-07 5E-12 76.8 7.0 55 350-417 43-99 (107)
232 3cbz_A Dishevelled-2; PDZ doma 98.5 1.1E-07 3.9E-12 77.9 6.3 72 332-417 17-93 (108)
233 1ujv_A Membrane associated gua 98.5 2.2E-07 7.6E-12 74.5 7.9 55 350-417 32-88 (96)
234 2byg_A Channel associated prot 98.5 1.9E-07 6.4E-12 77.8 7.7 73 332-417 35-111 (117)
235 2kjd_A Sodium/hydrogen exchang 98.5 1.4E-07 4.8E-12 79.5 6.9 68 333-417 21-90 (128)
236 1um1_A KIAA1849 protein, RSGI 98.5 1.1E-07 3.8E-12 78.0 6.1 71 333-417 20-93 (110)
237 2dlu_A INAD-like protein; PDZ 98.5 1.3E-07 4.4E-12 77.7 6.4 66 333-417 27-95 (111)
238 1vae_A Rhophilin 2, rhophilin, 98.5 1.1E-07 3.9E-12 78.4 6.0 56 350-417 36-93 (111)
239 1v62_A KIAA1719 protein; struc 98.5 1.3E-07 4.6E-12 78.6 6.4 54 351-417 43-99 (117)
240 2z17_A Pleckstrin homology SEC 98.5 7.5E-08 2.6E-12 78.2 4.8 54 350-416 48-103 (104)
241 2djt_A Unnamed protein product 98.5 1.5E-07 5.3E-12 76.3 6.6 71 332-417 22-95 (104)
242 3b76_A E3 ubiquitin-protein li 98.5 2.1E-07 7.2E-12 77.7 7.5 55 350-417 53-110 (118)
243 1b8q_A Protein (neuronal nitri 98.5 9.3E-08 3.2E-12 80.6 5.3 69 332-417 20-91 (127)
244 2qg1_A Multiple PDZ domain pro 98.5 1.1E-07 3.8E-12 75.3 5.4 68 332-417 16-86 (92)
245 1uf1_A KIAA1526 protein; PDZ d 98.5 1.2E-07 4.2E-12 80.0 5.9 69 333-417 33-101 (128)
246 1wf8_A Neurabin-I; PDZ domain, 98.5 9.5E-08 3.3E-12 78.0 4.9 55 350-417 40-97 (107)
247 3i4w_A Disks large homolog 4; 98.5 1.5E-07 5.1E-12 76.2 6.0 67 333-417 23-92 (104)
248 2jik_A Synaptojanin-2 binding 98.5 2.4E-07 8.4E-12 74.6 7.1 73 332-417 18-94 (101)
249 2dkr_A LIN-7 homolog B; LIN-7B 98.5 2.6E-07 8.7E-12 73.2 7.0 55 350-417 30-87 (93)
250 4e34_A Golgi-associated PDZ an 98.5 4.3E-07 1.5E-11 71.0 8.2 55 350-417 28-85 (87)
251 2opg_A Multiple PDZ domain pro 98.5 3.2E-07 1.1E-11 73.4 7.7 70 332-417 15-87 (98)
252 1lvm_A Catalytic domain of the 98.5 1.2E-05 4.1E-10 73.8 18.9 174 123-324 20-202 (229)
253 2fe5_A Presynaptic protein SAP 98.5 1.9E-07 6.5E-12 74.2 6.1 55 350-417 33-90 (94)
254 1mfg_A ERB-B2 interacting prot 98.5 1.6E-07 5.6E-12 74.8 5.7 54 350-417 35-90 (95)
255 1whd_A RGS3, regulator of G-pr 98.5 1.9E-07 6.4E-12 75.4 6.0 55 350-417 36-92 (100)
256 2fne_A Multiple PDZ domain pro 98.5 1.9E-07 6.6E-12 77.7 6.2 71 333-417 37-110 (117)
257 2d92_A INAD-like protein; PDZ 98.5 1.8E-07 6.3E-12 76.5 6.0 56 350-417 44-102 (108)
258 2db5_A INAD-like protein; PDZ 98.5 1.8E-07 6E-12 79.0 5.9 72 332-417 37-112 (128)
259 4fgm_A Aminopeptidase N family 98.5 1.8E-07 6E-12 99.0 7.2 56 350-417 496-551 (597)
260 1g9o_A NHE-RF; PDZ domain, com 98.5 3.7E-07 1.3E-11 72.1 7.4 66 333-416 15-82 (91)
261 1q7x_A PDZ2B domain of PTP-BAS 98.5 2.1E-07 7.3E-12 76.0 6.1 55 350-417 42-99 (108)
262 3axa_A Afadin, nectin-3, prote 98.5 3E-07 1E-11 74.8 6.9 55 350-417 38-95 (106)
263 1wf7_A Enigma homologue protei 98.5 1.7E-07 6E-12 75.9 5.5 55 350-417 29-85 (103)
264 4amh_A Disks large homolog 1; 98.4 2.3E-07 8E-12 75.7 6.1 55 350-417 32-89 (106)
265 3gsl_A Disks large homolog 4; 98.4 2.7E-07 9.2E-12 82.9 6.9 74 333-417 17-92 (196)
266 3l4f_D SH3 and multiple ankyri 98.4 3.2E-07 1.1E-11 78.0 6.9 55 350-417 65-121 (132)
267 2yuy_A RHO GTPase activating p 98.4 8.7E-08 3E-12 80.8 3.3 55 350-417 61-117 (126)
268 2pka_B Kallikrein A; serine pr 98.4 2.1E-06 7.1E-11 74.5 12.2 127 197-325 6-149 (152)
269 2dm8_A INAD-like protein; PDZ 98.4 3.6E-07 1.2E-11 75.5 6.6 70 332-417 28-100 (116)
270 2dc2_A GOPC, golgi associated 98.4 6.3E-07 2.2E-11 72.7 7.8 55 350-417 35-92 (103)
271 2d8i_A T-cell lymphoma invasio 98.4 2.4E-07 8.1E-12 76.9 5.1 66 334-417 31-98 (114)
272 1r6j_A Syntenin 1; PDZ, membra 98.4 4.6E-07 1.6E-11 70.6 6.4 52 353-417 26-79 (82)
273 1wfv_A Membrane associated gua 98.4 2E-07 6.7E-12 75.4 4.4 68 333-417 23-93 (103)
274 2eei_A PDZ domain-containing p 98.4 4E-07 1.4E-11 74.0 5.9 55 350-417 32-88 (106)
275 1wi4_A Synip, syntaxin binding 98.4 3.7E-07 1.3E-11 75.0 5.4 72 333-417 26-102 (109)
276 1uhp_A Hypothetical protein KI 98.3 3.3E-07 1.1E-11 74.8 4.8 55 350-417 41-98 (107)
277 1uju_A Scribble; PDZ domain, c 98.3 1.5E-07 5.1E-12 77.4 2.7 54 350-416 44-100 (111)
278 2g5m_B Neurabin-2; spinophilin 98.3 1.8E-07 6.2E-12 77.1 3.1 55 350-417 35-92 (113)
279 3k1r_A Harmonin; protein-prote 98.3 9.6E-07 3.3E-11 79.8 8.2 54 350-417 110-165 (192)
280 2edp_A Fragment, shroom family 98.3 3.9E-07 1.3E-11 73.5 5.0 55 350-417 35-91 (100)
281 1n7t_A 99-MER peptide of densi 98.3 3.2E-07 1.1E-11 74.3 4.4 54 350-417 43-98 (103)
282 3gsl_A Disks large homolog 4; 98.3 8.9E-07 3E-11 79.4 7.7 55 350-417 130-187 (196)
283 3hpk_A Protein interacting wit 98.3 1.1E-06 3.6E-11 73.8 7.5 69 332-417 31-102 (125)
284 3rle_A Golgi reassembly-stacki 98.3 3.7E-07 1.3E-11 83.8 4.7 72 331-417 94-167 (209)
285 3nfk_A Tyrosine-protein phosph 98.3 8.8E-07 3E-11 72.1 6.5 57 350-417 43-105 (107)
286 2qt5_A Glutamate receptor-inte 98.3 1E-06 3.6E-11 79.8 7.7 55 350-417 135-192 (200)
287 3egg_C Spinophilin; PP1, serin 98.3 1.1E-06 3.6E-11 78.2 7.5 73 332-417 91-168 (170)
288 1v6b_A Harmonin isoform A1; st 98.3 4.8E-07 1.7E-11 75.3 5.0 71 333-417 29-104 (118)
289 3tsz_A Tight junction protein 98.3 1.1E-06 3.8E-11 88.2 8.4 68 333-417 20-89 (391)
290 1p1d_A PDZ45, glutamate recept 98.3 1.1E-06 3.6E-11 79.6 7.5 71 332-417 119-192 (196)
291 2ehr_A INAD-like protein; PDZ 98.3 4.2E-07 1.5E-11 75.4 4.3 55 350-417 50-107 (117)
292 2daz_A INAD-like protein; PDZ 98.3 3.6E-07 1.2E-11 76.7 3.9 70 332-417 36-108 (124)
293 2iwo_A Multiple PDZ domain pro 98.3 5.6E-07 1.9E-11 75.2 4.9 55 350-417 53-110 (120)
294 2edv_A FERM and PDZ domain-con 98.3 4.5E-07 1.5E-11 72.6 4.0 54 350-417 31-86 (96)
295 2cs5_A Tyrosine-protein phosph 98.3 5E-07 1.7E-11 75.2 4.2 71 332-417 27-103 (119)
296 1x5n_A Harmonin; PDZ domain, u 98.3 7.1E-07 2.4E-11 73.6 5.0 67 333-417 28-96 (114)
297 2csj_A TJP2 protein; PDZ domai 98.3 5.1E-07 1.7E-11 74.9 4.0 54 350-417 46-101 (117)
298 1x6d_A Interleukin-16; PDZ dom 98.2 8.5E-07 2.9E-11 73.7 5.1 55 350-416 42-99 (119)
299 3soe_A Membrane-associated gua 98.2 3.9E-06 1.3E-10 69.3 8.4 54 351-417 35-90 (113)
300 2qt5_A Glutamate receptor-inte 98.2 2.6E-06 8.9E-11 77.2 8.2 69 332-417 19-90 (200)
301 1um7_A Synapse-associated prot 98.2 7.1E-07 2.4E-11 73.3 3.9 55 350-417 39-96 (113)
302 3r0h_A INAD, inactivation-NO-a 98.2 2.3E-06 7.8E-11 77.7 7.1 65 333-417 126-193 (206)
303 1ufx_A KIAA1526 protein; PDZ d 98.2 2.7E-06 9.2E-11 69.0 6.8 57 350-417 32-94 (103)
304 3shw_A Tight junction protein 98.2 2.7E-06 9.2E-11 87.0 7.6 57 350-417 23-81 (468)
305 2lob_A Golgi-associated PDZ an 97.5 2.6E-07 8.7E-12 76.4 0.0 55 350-417 53-110 (112)
306 2qbw_A PDZ-fibronectin fusion 98.1 2.5E-06 8.5E-11 76.8 5.7 54 350-417 24-79 (195)
307 1i16_A Interleukin 16, LCF; cy 98.1 2.6E-06 8.8E-11 72.1 5.3 56 350-417 57-115 (130)
308 1fc6_A Photosystem II D1 prote 98.1 6.7E-06 2.3E-10 82.4 9.1 71 331-417 84-156 (388)
309 3r0h_A INAD, inactivation-NO-a 98.1 5E-06 1.7E-10 75.4 6.6 72 332-417 29-105 (206)
310 3gge_A PDZ domain-containing p 98.0 1.4E-05 4.8E-10 63.7 8.2 69 332-417 16-87 (95)
311 2krg_A Na(+)/H(+) exchange reg 98.0 2E-06 7E-11 79.3 3.7 66 333-416 21-89 (216)
312 3pv2_A DEGQ; trypsin fold, PDZ 98.0 5.2E-06 1.8E-10 84.9 6.2 55 350-417 386-440 (451)
313 4a8c_A Periplasmic PH-dependen 98.0 1.1E-05 3.9E-10 82.0 7.6 55 350-417 363-417 (436)
314 1z87_A Alpha-1-syntrophin; pro 97.9 8E-06 2.7E-10 77.5 5.2 55 350-417 103-160 (263)
315 3suz_A Amyloid beta A4 precurs 97.8 1.1E-05 3.7E-10 80.9 4.4 71 332-417 216-291 (388)
316 3k50_A Putative S41 protease; 97.7 1.4E-05 4.9E-10 80.3 3.5 53 351-417 91-143 (403)
317 3qzr_A 3C protein; chymotrypsi 97.7 0.0079 2.7E-07 53.6 20.6 159 124-313 14-178 (187)
318 2hal_A Hepatitis A protease 3C 97.7 0.00076 2.6E-08 61.8 13.8 173 119-313 3-204 (212)
319 3zve_A 3C protease; hydrolase, 97.6 0.011 3.9E-07 52.9 21.0 145 152-313 23-174 (190)
320 4dcd_A Protease 3C, genome pol 97.6 0.0098 3.3E-07 53.1 19.9 147 151-313 29-181 (190)
321 3q3y_A HEVB EV93 3C protease; 97.6 0.0071 2.4E-07 53.9 18.6 159 124-313 12-176 (191)
322 1w9e_A Syntenin 1; cell adhesi 97.5 9.3E-05 3.2E-09 64.9 5.2 54 353-417 110-163 (166)
323 2xkx_A Disks large homolog 4; 97.5 0.00012 4.1E-09 79.0 6.6 55 350-417 89-146 (721)
324 1ky9_A Protease DO, DEGP, HTRA 97.4 2.2E-05 7.4E-10 80.2 0.0 54 350-416 383-436 (448)
325 2b0f_A Picornain 3C (protease 97.4 0.01 3.5E-07 52.7 17.0 142 153-313 24-173 (182)
326 2xkx_A Disks large homolog 4; 97.4 0.00022 7.6E-09 77.0 7.4 55 350-417 331-388 (721)
327 1cqq_A Type 2 rhinovirus 3C pr 97.4 0.02 6.8E-07 50.9 18.7 143 153-313 24-174 (180)
328 4fln_A Protease DO-like 2, chl 97.4 0.00029 1E-08 73.2 7.7 54 350-415 415-468 (539)
329 1k32_A Tricorn protease; prote 97.1 0.00053 1.8E-08 76.6 7.1 57 350-417 748-812 (1045)
330 3suz_A Amyloid beta A4 precurs 96.8 0.00019 6.6E-09 71.8 0.0 54 350-416 315-370 (388)
331 2bhg_A Foot-and-mouth disease 96.7 0.0057 2E-07 55.7 9.1 159 153-324 31-204 (209)
332 2pka_A Kallikrein A; serine pr 96.6 0.0045 1.5E-07 47.0 6.7 24 152-176 24-47 (80)
333 2ijd_1 Picornain 3C, RNA-direc 96.1 0.24 8.1E-06 52.6 18.6 143 153-313 24-174 (644)
334 1yph_E Chymotrypsin A, chain C 94.2 0.035 1.2E-06 43.7 3.7 51 273-324 41-94 (97)
335 1wxr_A Haemoglobin protease; h 93.8 0.14 4.8E-06 56.4 8.6 80 152-236 56-144 (1048)
336 3e90_B NS3 protease; trypsin-l 92.6 0.23 7.9E-06 43.6 6.4 132 124-295 21-155 (198)
337 2fom_B Polyprotein; flavivirus 92.5 0.2 6.9E-06 43.7 6.0 133 123-295 16-151 (185)
338 3u1j_B Serine protease NS3; se 92.5 0.29 9.8E-06 42.8 6.9 132 124-295 26-160 (191)
339 2fp7_B Serine protease NS3; fl 92.3 0.19 6.4E-06 43.3 5.4 114 152-295 20-136 (172)
340 2ggv_B NS3, non-structural pro 92.3 0.21 7.1E-06 43.5 5.7 134 124-297 16-152 (185)
341 3lkw_A Fusion protein of nonst 91.7 0.32 1.1E-05 43.9 6.4 128 128-295 71-201 (236)
342 4ash_A NS6 protease; hydrolase 91.3 0.69 2.4E-05 39.2 7.7 135 151-298 14-163 (185)
343 1ep5_B Capsid protein C, coat 90.1 0.35 1.2E-05 39.9 4.7 41 268-313 97-137 (157)
344 1vcp_A Semliki forest virus ca 89.8 0.45 1.5E-05 38.8 5.0 31 268-298 90-120 (149)
345 4agk_A Capsid protein, coat pr 89.6 0.46 1.6E-05 39.2 5.0 29 270-298 100-128 (158)
346 2yew_A Capsid protein, coat pr 89.1 0.45 1.6E-05 42.8 5.1 39 270-313 196-234 (253)
347 1svp_A Sindbis virus capsid pr 88.8 0.56 1.9E-05 38.8 5.0 30 269-298 100-129 (161)
348 1kxf_A Sindbis virus capsid pr 87.6 0.56 1.9E-05 42.5 4.7 40 269-313 205-244 (264)
349 2fyq_A Chymotrypsin-like cyste 86.6 2.4 8.1E-05 36.1 7.7 136 151-299 25-175 (194)
350 3su6_A NS3 protease, NS4A prot 73.9 1.3 4.3E-05 38.8 1.7 26 273-298 154-179 (203)
351 4hcz_A PHD finger protein 1; p 57.2 38 0.0013 23.8 6.3 38 172-209 4-41 (58)
352 3s6n_G Small nuclear ribonucle 49.2 55 0.0019 23.9 6.7 33 176-208 15-47 (76)
353 2eqj_A Metal-response element- 47.2 63 0.0021 23.3 6.3 38 172-209 14-51 (66)
354 1h64_1 SnRNP SM-like protein; 45.7 35 0.0012 24.8 5.1 33 176-208 15-47 (75)
355 1i4k_A Putative snRNP SM-like 45.7 39 0.0013 24.7 5.4 33 176-208 15-47 (77)
356 1th7_A SnRNP-2, small nuclear 44.4 38 0.0013 25.2 5.2 33 176-208 20-52 (81)
357 1d3b_B Protein (small nuclear 43.5 36 0.0012 25.9 5.0 33 176-208 15-47 (91)
358 1mgq_A SM-like protein; LSM, R 41.9 45 0.0015 24.9 5.3 33 176-208 26-58 (83)
359 1d3b_A Protein (small nuclear 40.5 53 0.0018 24.0 5.4 33 176-208 16-48 (75)
360 2o8m_A Protease; NS3, NS4A, vi 40.3 13 0.00043 32.8 2.1 23 275-297 146-168 (200)
361 1y96_A Gemin6, SIP2, GEM-assoc 40.0 69 0.0023 24.4 6.0 32 176-207 18-50 (86)
362 3s6n_F Small nuclear ribonucle 38.9 56 0.0019 24.6 5.4 33 176-208 17-49 (86)
363 4esy_A CBS domain containing m 38.8 13 0.00046 31.1 2.0 22 276-297 47-68 (170)
364 4emk_B U6 snRNA-associated SM- 38.6 43 0.0015 24.4 4.6 33 176-208 15-47 (75)
365 1ljo_A Archaeal SM-like protei 37.7 60 0.002 23.7 5.3 33 176-208 16-49 (77)
366 4emg_A Probable U6 snRNA-assoc 37.3 57 0.0019 25.0 5.3 33 176-208 20-52 (93)
367 1i8f_A Putative snRNP SM-like 37.1 43 0.0015 24.9 4.4 33 176-208 22-54 (81)
368 4emk_C U6 snRNA-associated SM- 36.4 59 0.002 26.0 5.4 33 176-208 34-66 (113)
369 4emk_A U6 snRNA-associated SM- 36.2 57 0.002 25.2 5.1 33 176-208 31-63 (94)
370 3bw1_A SMX4 protein, U6 snRNA- 35.0 51 0.0017 25.4 4.7 33 176-208 21-53 (96)
371 1b34_A Protein (small nuclear 34.7 70 0.0024 25.7 5.7 61 176-238 13-73 (119)
372 1z8r_A Coxsackievirus B4 polyp 34.2 58 0.002 27.8 5.2 31 266-297 113-143 (166)
373 1b34_B Protein (small nuclear 33.5 64 0.0022 25.9 5.3 34 175-208 39-72 (118)
374 2hrv_A 2A cysteine proteinase; 33.0 62 0.0021 27.0 5.0 30 267-297 94-123 (142)
375 4emh_A Probable U6 snRNA-assoc 32.4 77 0.0026 25.0 5.4 33 176-208 27-59 (105)
376 3pgw_B SM B; protein-RNA compl 31.8 50 0.0017 30.0 4.7 33 176-208 15-47 (231)
377 3k6e_A CBS domain protein; str 31.1 21 0.00072 29.7 2.0 22 275-296 45-66 (156)
378 3k6e_A CBS domain protein; str 29.8 24 0.00084 29.3 2.2 16 281-296 118-133 (156)
379 2m0o_A PHD finger protein 1; t 29.5 63 0.0022 24.0 4.0 36 174-209 29-64 (79)
380 1n9r_A SMF, small nuclear ribo 29.3 78 0.0027 24.3 4.8 34 175-208 31-65 (93)
381 3nqr_A Magnesium and cobalt ef 29.2 25 0.00087 27.6 2.1 20 277-296 98-117 (127)
382 3lfr_A Putative metal ION tran 28.1 27 0.00092 27.9 2.1 21 277-297 99-119 (136)
383 3gby_A Uncharacterized protein 27.9 28 0.00097 27.3 2.2 19 278-296 99-117 (128)
384 2e5p_A Protein PHF1, PHD finge 27.4 1.7E+02 0.006 21.0 6.2 37 173-209 11-47 (68)
385 3hf7_A Uncharacterized CBS-dom 27.4 28 0.00097 27.5 2.1 20 277-296 99-118 (130)
386 3i8n_A Uncharacterized protein 27.1 29 0.00099 27.3 2.1 20 277-296 101-120 (130)
387 3jtf_A Magnesium and cobalt ef 26.6 29 0.00098 27.4 2.0 20 277-296 98-117 (129)
388 2xk0_A Polycomb protein PCL; t 25.7 1.5E+02 0.005 21.5 5.3 38 170-209 14-51 (69)
389 3d3r_A Hydrogenase assembly ch 24.9 90 0.0031 24.6 4.5 45 188-235 26-72 (103)
390 3kpb_A Uncharacterized protein 24.7 36 0.0012 26.2 2.2 20 277-296 92-111 (122)
391 1p0z_A Sensor kinase CITA; tra 24.2 40 0.0014 27.0 2.5 18 281-298 106-123 (131)
392 3oco_A Hemolysin-like protein 23.9 33 0.0011 28.0 1.9 20 277-296 115-134 (153)
393 3lv9_A Putative transporter; C 23.9 35 0.0012 27.5 2.1 20 277-296 117-136 (148)
394 3oi8_A Uncharacterized protein 23.9 35 0.0012 28.0 2.1 20 277-296 132-151 (156)
395 2fwk_A U6 snRNA-associated SM- 23.5 70 0.0024 25.8 3.8 32 176-207 39-70 (121)
396 1m5q_A SMAP3, small nuclear ri 23.4 1.3E+02 0.0044 24.6 5.4 33 176-208 11-43 (130)
397 4a4f_A SurviVal of motor neuro 22.9 2E+02 0.0068 20.1 5.9 34 175-208 12-46 (64)
398 3lqn_A CBS domain protein; csg 22.8 39 0.0013 27.1 2.2 16 281-296 119-134 (150)
399 2nyc_A Nuclear protein SNF4; b 22.4 41 0.0014 26.6 2.2 20 277-296 113-132 (144)
400 3kxr_A Magnesium transporter, 22.3 39 0.0013 29.5 2.2 20 277-296 146-165 (205)
401 2y9a_D Small nuclear ribonucle 22.1 1.7E+02 0.0058 23.7 5.9 33 176-208 16-48 (126)
402 4gqw_A CBS domain-containing p 21.5 44 0.0015 26.6 2.2 20 277-296 115-134 (152)
403 2ef7_A Hypothetical protein ST 21.4 43 0.0015 26.2 2.1 20 277-296 97-116 (133)
404 3ctu_A CBS domain protein; str 21.3 44 0.0015 27.1 2.2 14 282-295 119-132 (156)
405 2rih_A Conserved protein with 20.6 46 0.0016 26.4 2.1 21 277-297 100-120 (141)
406 3sl7_A CBS domain-containing p 20.6 46 0.0016 27.5 2.2 21 276-296 127-147 (180)
407 3lhh_A CBS domain protein; str 20.5 45 0.0015 27.8 2.1 20 277-296 136-155 (172)
408 3by8_A Sensor protein DCUS; hi 20.3 53 0.0018 26.7 2.5 17 281-297 111-127 (142)
409 2uv4_A 5'-AMP-activated protei 20.1 48 0.0017 26.8 2.2 14 282-295 128-141 (152)
No 1
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.5e-55 Score=439.85 Aligned_cols=309 Identities=91% Similarity=1.348 Sum_probs=281.0
Q ss_pred ccCCccchhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEE
Q 014786 109 RKLQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAY 188 (418)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~ 188 (418)
..+.+++....++++++.+|||.|......++.|..+..+.+.+.||||+|+++||||||+||+.+...+.|.+.+++.+
T Consensus 10 ~~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~ 89 (348)
T 3qo6_A 10 KKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTF 89 (348)
T ss_dssp CCCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEE
T ss_pred cccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCCEE
Confidence 34567888899999999999999999877777776555555678999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEE
Q 014786 189 DAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 268 (418)
Q Consensus 189 ~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i 268 (418)
+++++..|+.+||||||++.+...+++++++++..+..|+.|+++|||++...+.+.|+++.+.+.......+......+
T Consensus 90 ~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i 169 (348)
T 3qo6_A 90 DAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 169 (348)
T ss_dssp EEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEEEEE
T ss_pred EEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCcccCEE
Confidence 99999999999999999987655688999988888999999999999999888999999999888766544445556789
Q ss_pred EEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcccccccccCeeeccchhhhhhC
Q 014786 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPDQSVEQLG 348 (418)
Q Consensus 269 ~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv~~~~~~~~~~~~ 348 (418)
++++.+++|+|||||+|.+|+||||+++.+.+++...+++|+||++.+++++++++++|++.|||||+.+++....+.++
T Consensus 170 ~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~ 249 (348)
T 3qo6_A 170 QTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLG 249 (348)
T ss_dssp EECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTTTTT
T ss_pred EEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhhhcC
Confidence 99999999999999999999999999999877666789999999999999999999999999999999999876677888
Q ss_pred ccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 349 VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 349 ~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+.|++|.+|.+++||++|||+..++++++.|+.||+|++|||++|.+++|+.++|...++|++|+|+|+
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 318 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVL 318 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEE
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEE
Confidence 899999999999999999999988999999999999999999999999999999998889999999885
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.1e-51 Score=407.92 Aligned_cols=286 Identities=38% Similarity=0.609 Sum_probs=249.4
Q ss_pred hHHHHHHHcCCceEEEEeeecccC----------cccc---cc-ccCCCeEEEEEEEcCC-cEEEecccccCCCCeEEEE
Q 014786 117 ATVRLFQENTPSVVNITNLAARQD----------AFTL---DV-LEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (418)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~----------~~~~---~~-~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V~ 181 (418)
++.++++++.||||.|.+...... +|.. +. .....+.||||+|+++ ||||||+||+.++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~ 93 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEE
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEE
Confidence 467899999999999998765431 1110 00 0112589999999987 9999999999999999999
Q ss_pred eCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCC
Q 014786 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (418)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~ 261 (418)
+.|++.+++++++.|+.+||||||++.+ ..+++++++++..++.|++|+++|||++...+++.|+|+...+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~---~~ 169 (345)
T 3stj_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (345)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCS---SS
T ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEccc-CCCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 9999999999999999999999999764 4689999998888999999999999999999999999998877511 12
Q ss_pred CCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcccccccccCeeecc-
Q 014786 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP- 340 (418)
Q Consensus 262 ~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv~~~~- 340 (418)
..+..++++|+.+++|+|||||+|.+|+||||+++.....++..+++|+||++.+++++++|+++|++.|+|||+.+++
T Consensus 170 ~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~~ 249 (345)
T 3stj_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (345)
T ss_dssp SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEee
Confidence 2345789999999999999999999999999999998877777899999999999999999999999999999999886
Q ss_pred -chhhhhhCc---cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEE
Q 014786 341 -DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 341 -~~~~~~~~~---~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v 416 (418)
...++.+++ .|++|.+|.+++||+++||++ ||+|++|||++|.++.||.+++...++|++++|+|
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 318 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGL 318 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCT-----------TCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 445777887 799999999999999999999 99999999999999999999999888999999987
Q ss_pred E
Q 014786 417 F 417 (418)
Q Consensus 417 ~ 417 (418)
+
T Consensus 319 ~ 319 (345)
T 3stj_A 319 L 319 (345)
T ss_dssp E
T ss_pred E
Confidence 5
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.8e-49 Score=407.12 Aligned_cols=287 Identities=37% Similarity=0.603 Sum_probs=252.0
Q ss_pred hhHHHHHHHcCCceEEEEeeecccC----------cccc---cc-ccCCCeEEEEEEEcCC-cEEEecccccCCCCeEEE
Q 014786 116 LATVRLFQENTPSVVNITNLAARQD----------AFTL---DV-LEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRV 180 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~----------~~~~---~~-~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V 180 (418)
.++.++++++.||||.|.+...... +|.. +. .....+.||||||+++ ||||||+|||+++..+.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V 92 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEE
Confidence 3588899999999999998764431 1110 00 1123589999999988 999999999999999999
Q ss_pred EeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCC
Q 014786 181 TFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT 260 (418)
Q Consensus 181 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~ 260 (418)
.+.|++.++|++++.|+.+||||||++.+ ..+++++++++..+++|++|+++|||++...+++.|+|++..+... .
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAllkv~~~-~~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~---~ 168 (436)
T 4a8c_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---N 168 (436)
T ss_pred EeCCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeeccccc---C
Confidence 99999999999999999999999999764 3689999998888999999999999999999999999998877511 1
Q ss_pred CCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcccccccccCeeecc
Q 014786 261 GRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP 340 (418)
Q Consensus 261 ~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv~~~~ 340 (418)
...+.+++++|+++++|+|||||+|.+|+||||+++.....++..+++|+||++.+++++++|+++|++.|+|||+.+++
T Consensus 169 ~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~ 248 (436)
T 4a8c_A 169 LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 248 (436)
T ss_pred CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEecc
Confidence 23346789999999999999999999999999999988776677899999999999999999999999999999999986
Q ss_pred --chhhhhhCc---cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEE
Q 014786 341 --DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCF 415 (418)
Q Consensus 341 --~~~~~~~~~---~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~ 415 (418)
...++.+|+ .|++|.+|.++|||+++||+. ||+|++|||++|.++.|+...+...++|++++++
T Consensus 249 ~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~-----------GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~ 317 (436)
T 4a8c_A 249 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKA-----------GDIITSLNGKPLNSFAELRSRIATTEPGTKVKLG 317 (436)
T ss_pred cCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEE
Confidence 445777887 699999999999999999999 9999999999999999999999988899999998
Q ss_pred EE
Q 014786 416 TF 417 (418)
Q Consensus 416 v~ 417 (418)
|+
T Consensus 318 v~ 319 (436)
T 4a8c_A 318 LL 319 (436)
T ss_pred EE
Confidence 75
No 4
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.6e-49 Score=408.62 Aligned_cols=286 Identities=40% Similarity=0.632 Sum_probs=239.7
Q ss_pred hhHHHHHHHcCCceEEEEeeeccc-----------Ccccccc-----------ccCCCeEEEEEEEcCC-cEEEeccccc
Q 014786 116 LATVRLFQENTPSVVNITNLAARQ-----------DAFTLDV-----------LEVPQGSGSGFVWDSK-GHVVTNYHVI 172 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~-----------~~~~~~~-----------~~~~~~~GSGfiI~~~-G~ILT~aHvv 172 (418)
.++.++++++.||||.|.+..... ++|.... ....++.||||||+++ ||||||+|||
T Consensus 19 ~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv 98 (451)
T 3pv2_A 19 PSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVI 98 (451)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHH
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHh
Confidence 357789999999999999875321 1111000 1123578999999975 9999999999
Q ss_pred CCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCC-----CceeEeE
Q 014786 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGV 247 (418)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~ 247 (418)
++++.+.|.+.|++.++|++++.|+.+||||||++. ..++++.++++..+++|++|+++|||++.. .+++.|+
T Consensus 99 ~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~Gi 176 (451)
T 3pv2_A 99 RNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGI 176 (451)
T ss_dssp TTEEEEEEECTTSCEEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEEEE
T ss_pred CCCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCccccccCCceeEEE
Confidence 999999999999999999999999999999999976 468999999888899999999999999988 8999999
Q ss_pred EeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcc
Q 014786 248 ISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (418)
Q Consensus 248 Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g 327 (418)
|++..+... ....+..++++|+++++|+|||||+|.+|+||||+++.+.+.++..+++|+||++.+++++++|+++|
T Consensus 177 vs~~~r~~~---~~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g 253 (451)
T 3pv2_A 177 VSALKRSDL---NIEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFG 253 (451)
T ss_dssp EEEEC-------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHS
T ss_pred Eeecccccc---CCCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcC
Confidence 998876511 11234578999999999999999999999999999998876666789999999999999999999999
Q ss_pred cccccccCeeecc--chhhhhhCc----cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHH
Q 014786 328 KVTRPILGIKFAP--DQSVEQLGV----SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYR 401 (418)
Q Consensus 328 ~v~~~~lGv~~~~--~~~~~~~~~----~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~ 401 (418)
++.|+|||+.+++ ...++.+|+ .|++|.+|.++|||+++||+. ||+|++|||++|.++.|+..
T Consensus 254 ~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~-----------GDvI~~vnG~~v~~~~~l~~ 322 (451)
T 3pv2_A 254 SIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKA-----------GDIITQINDTKITQATQVKT 322 (451)
T ss_dssp SCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHH
T ss_pred CcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCC-----------CCEEEEECCEEcCCHHHHHH
Confidence 9999999999986 445777876 599999999999999999999 99999999999999999999
Q ss_pred HHhcCCCCCEEEEEEE
Q 014786 402 ILDQCKVGDEVSCFTF 417 (418)
Q Consensus 402 ~l~~~~~g~~v~l~v~ 417 (418)
.+...++|++++|+|+
T Consensus 323 ~l~~~~~g~~v~l~V~ 338 (451)
T 3pv2_A 323 TISLLRVGSTVKIIVE 338 (451)
T ss_dssp HHHTSCTTCEEEEEEE
T ss_pred HHHhcCCCCEEEEEEE
Confidence 9998899999999875
No 5
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=3.4e-48 Score=382.19 Aligned_cols=284 Identities=34% Similarity=0.523 Sum_probs=244.5
Q ss_pred hhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEE
Q 014786 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (418)
.+..++++++.+|||+|.......++ .......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++.+
T Consensus 9 ~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~ 85 (318)
T 1te0_A 9 ASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVGS 85 (318)
T ss_dssp CCCHHHHHHHGGGEEEEEEEEECSSS---SCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEEEE
T ss_pred ccHHHHHHhcCCcEEEEEeEeccCCc---ccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEe
Confidence 45678899999999999987644321 111123578999999998999999999999999999999999999999999
Q ss_pred cCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccC
Q 014786 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (418)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 275 (418)
|+.+||||||++.+ ..+++++|+++..++.|++|+++|||++....++.|+|+...+.... ......++++++.++
T Consensus 86 d~~~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d~~~~ 161 (318)
T 1te0_A 86 DSLTDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTDASIN 161 (318)
T ss_dssp ETTTTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCC---TTCSCCSEEESSCCC
T ss_pred CCCceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccC---CCCcCCEEEECCCCC
Confidence 99999999999875 36889999877779999999999999998889999999877654211 122356889999999
Q ss_pred CCCCCCceeCCCceEEEEEeeeeCCCC---CCCCccceeecccchhhhhhhhhcccccccccCeeecc--chhhhhhCc-
Q 014786 276 PGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAP--DQSVEQLGV- 349 (418)
Q Consensus 276 ~G~SGGPl~n~~G~VVGI~s~~~~~~~---~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv~~~~--~~~~~~~~~- 349 (418)
+|+|||||+|.+|+||||+++...+.+ ...+++|+||++.+++++++|+++|++.++|||+.+++ ...++.+++
T Consensus 162 ~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g~~ 241 (318)
T 1te0_A 162 HGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGGID 241 (318)
T ss_dssp TTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSSSCSS
T ss_pred CCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHHHhccCC
Confidence 999999999999999999998765421 45689999999999999999999999999999999876 334566665
Q ss_pred --cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 --SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 --~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.++.|+.+++...++|++++|+|+
T Consensus 242 ~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~ 300 (318)
T 1te0_A 242 QLQGIVVNEVSPDGPAANAGIQV-----------NDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVM 300 (318)
T ss_dssp SCCCEEEEEECTTSTTTTTCCCT-----------TCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEE
T ss_pred CCCcEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 699999999999999999999 999999999999999999999988789999999875
No 6
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=5.3e-48 Score=401.66 Aligned_cols=276 Identities=28% Similarity=0.408 Sum_probs=232.3
Q ss_pred HcCCceEEEEeeecccCccccccccC-CCeEEEEEEEcCCcEEEecccccCCCCeEEEEe-CCCcEEEEEEEEEcCCCCe
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEV-PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTF-ADQSAYDAKIVGFDQDKDV 201 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~-~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~-~dg~~~~a~vv~~d~~~Dl 201 (418)
.+.+|||+|.+.....+.+.+|.... ..+.||||||+ +||||||+|||+++..++|.+ .||+.|+|++++.|+.+||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DL 123 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDI 123 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCE
Confidence 34689999999887777666665433 35889999998 689999999999999999998 4999999999999999999
Q ss_pred EEEEecCCC--CCCcccccCCCCCCCCCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCC
Q 014786 202 AVLRIDAPK--DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (418)
Q Consensus 202 AlLkv~~~~--~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~ 278 (418)
||||++.+. ...+++.++ +.++.|++|+++|||++... +++.|+|+++.+.... .+.....+||+|+++++|+
T Consensus 124 AvLkv~~~~~~~~~~pl~~g--~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~--~~~~~~~~IQtDAaInpGn 199 (539)
T 4fln_A 124 ALLSVESEDFWKGAEPLRLG--HLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSDLLGIQIDAAINPGN 199 (539)
T ss_dssp EEEEECCSSSSTTCCCCCBC--CCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECT--TSCCEEEEEEESSCCCTTT
T ss_pred EEEEEeCCcCCcCCceeecC--CcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccC--CCCcceeEEEEEeEecCCC
Confidence 999998743 223455554 45788999999999998765 8999999998876432 2333446799999999999
Q ss_pred CCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhccccc-ccccCeeecc---chhhhhhCc---cC
Q 014786 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVT-RPILGIKFAP---DQSVEQLGV---SG 351 (418)
Q Consensus 279 SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~-~~~lGv~~~~---~~~~~~~~~---~G 351 (418)
|||||||.+|+||||+++.+... +..++|||||++.+++++++|+++|++. |+|||+.+++ ...++.+++ .|
T Consensus 200 SGGPLvn~~GeVIGIntai~~~~-~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~~~G 278 (539)
T 4fln_A 200 SGGPAFNDQGECIGVAFQVYRSE-ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEG 278 (539)
T ss_dssp TTSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSSSBC
T ss_pred ccchhccCCCcEEEEEEEEecCC-CCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCCcCc
Confidence 99999999999999999877543 3568999999999999999999999986 9999999975 345677887 69
Q ss_pred cEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHH----------HHHHHhcCCCCCEEEEEEE
Q 014786 352 VLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD----------LYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 352 ~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~d----------l~~~l~~~~~g~~v~l~v~ 417 (418)
++|.+|.+++||+++ |+. ||||++|||++|.+..+ |..++..+++|++|+|+|+
T Consensus 279 v~V~~V~~~spA~~a-l~~-----------GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~ 342 (539)
T 4fln_A 279 VLVRRVEPTSDASKV-LKE-----------GDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGII 342 (539)
T ss_dssp EEEEEECTTSGGGGT-CCT-----------TCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEE
T ss_pred eeeecccCCChHHhC-ccC-----------CCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEE
Confidence 999999999999887 998 99999999999987655 7788999999999999986
No 7
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=6.2e-48 Score=396.53 Aligned_cols=286 Identities=39% Similarity=0.606 Sum_probs=246.1
Q ss_pred hHHHHHHHcCCceEEEEeeeccc-----------Ccccccc--------------------------ccCCCeEEEEEEE
Q 014786 117 ATVRLFQENTPSVVNITNLAARQ-----------DAFTLDV--------------------------LEVPQGSGSGFVW 159 (418)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~-----------~~~~~~~--------------------------~~~~~~~GSGfiI 159 (418)
++.++++++.||||.|.+..... .+|.... .....+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 46789999999999998765421 1111100 0011368999999
Q ss_pred cCC-cEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCC
Q 014786 160 DSK-GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (418)
Q Consensus 160 ~~~-G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g 238 (418)
+++ ||||||+||++++..+.|++.|++.++|++++.|+.+||||||++.+ ..+++++++++..+++|++|+++|||++
T Consensus 94 ~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~-~~~~~~~l~~s~~~~~G~~V~aiG~P~g 172 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNP-KNLTAIKMADSDALRVGDYTVAIGNPFG 172 (448)
T ss_dssp ETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred ECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCC-CCCceEEecccccCCCCCEEEEEECCCC
Confidence 987 99999999999999999999999999999999999999999999864 3689999998888999999999999999
Q ss_pred CCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchh
Q 014786 239 LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNG 318 (418)
Q Consensus 239 ~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~ 318 (418)
...+++.|+|++..+... ....+..++++|+++++|+|||||+|.+|+||||+++.....++..+++|+||++.+++
T Consensus 173 ~~~tvt~Givs~~~r~~~---~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~ 249 (448)
T 1ky9_A 173 LGETVTSGIVSALGRSGL---NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKN 249 (448)
T ss_dssp SSCEEEEEEEEEESSCC--------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHH
T ss_pred CCCeEEeEEEeecccccc---CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchh
Confidence 989999999998876511 11234578999999999999999999999999999988776556778999999999999
Q ss_pred hhhhhhhcccccccccCeeecc--chhhhhhCc---cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEe
Q 014786 319 IVDQLVKFGKVTRPILGIKFAP--DQSVEQLGV---SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (418)
Q Consensus 319 ~l~~l~~~g~v~~~~lGv~~~~--~~~~~~~~~---~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v 393 (418)
++++|+++|++.|+|||+.+++ ...++.+++ .|++|.+|.+++||+++||+. ||+|++|||++|
T Consensus 250 ~~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~-----------GDvI~~inG~~v 318 (448)
T 1ky9_A 250 LTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKA-----------GDVITSLNGKPI 318 (448)
T ss_dssp HHHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCT-----------TCEECBSSSSBC
T ss_pred hHHHHhhhcccceeccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCC-----------CCEEEEECCEEc
Confidence 9999999999999999999886 345777887 599999999999999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 394 SNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 394 ~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.++.|+..++...++|++++|+|+
T Consensus 319 ~~~~~l~~~l~~~~~g~~v~l~v~ 342 (448)
T 1ky9_A 319 SSFAALRAQVGTMPVGSKLTLGLL 342 (448)
T ss_dssp CSSHHHHHHTTSSBTTCCCEEEEE
T ss_pred CCHHHHHHHHHhcCCCCEEEEEEE
Confidence 999999999988888999998875
No 8
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=5e-46 Score=367.58 Aligned_cols=274 Identities=36% Similarity=0.603 Sum_probs=235.3
Q ss_pred hhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCC---------eEEEEeCCCc
Q 014786 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---------DIRVTFADQS 186 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---------~i~V~~~dg~ 186 (418)
.+..++++++.||||+|...... ..+.||||+|+++||||||+||+.+.. .+.|.+.|++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~~-----------~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~ 74 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLGR-----------QSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGR 74 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCC
T ss_pred ccHHHHHHHhcCcEEEEEEEccC-----------CCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCC
Confidence 35778999999999999875321 256899999998889999999998865 7999999999
Q ss_pred EEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccC-CC--CC
Q 014786 187 AYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA-TG--RP 263 (418)
Q Consensus 187 ~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~-~~--~~ 263 (418)
.++++++.+|+.+||||||++.+ ..++++.|+++..+..|+.|+++|||++...+++.|+++...+...... .+ ..
T Consensus 75 ~~~a~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~ 153 (324)
T 1y8t_A 75 TAPFTVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNT 153 (324)
T ss_dssp EECEEEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CC
T ss_pred EEEEEEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccc
Confidence 99999999999999999999875 4689999987777899999999999999888889999998776543211 01 23
Q ss_pred cccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCC-------CCCCCccceeecccchhhhhhhhhcccccccccCe
Q 014786 264 IQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPS-------GASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI 336 (418)
Q Consensus 264 ~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~-------~~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv 336 (418)
...++++++.+++|+|||||+|.+|+||||+++..... +...+++|+||++.+++++++|+++|++.++|||+
T Consensus 154 ~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi 233 (324)
T 1y8t_A 154 VLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 233 (324)
T ss_dssp CEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCE
T ss_pred cCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccce
Confidence 45789999999999999999999999999999876542 23468999999999999999999999999999999
Q ss_pred eeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEE
Q 014786 337 KFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 337 ~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.+.... ...|++|.+|.+++||+++||+. ||+|++|||++|.++.|+.+++...++|++++|+|
T Consensus 234 ~~~~~~-----~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v 297 (324)
T 1y8t_A 234 QVTNDK-----DTLGAKIVEVVAGGAAANAGVPK-----------GVVVTKVDDRPINSADALVAAVRSKAPGATVALTF 297 (324)
T ss_dssp EEESCS-----SSSSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEE
T ss_pred Eeeecc-----CCCceEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEE
Confidence 987532 12799999999999999999999 99999999999999999999998878899999987
Q ss_pred E
Q 014786 417 F 417 (418)
Q Consensus 417 ~ 417 (418)
+
T Consensus 298 ~ 298 (324)
T 1y8t_A 298 Q 298 (324)
T ss_dssp E
T ss_pred E
Confidence 5
No 9
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=3.9e-46 Score=368.56 Aligned_cols=278 Identities=32% Similarity=0.535 Sum_probs=224.3
Q ss_pred hhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEE
Q 014786 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (418)
....++++++.||||+|..... ++|.. .+...+.||||+|+++||||||+||+.+...+.|++.+|+.++++++.+
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~--~~~~~--~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~ 90 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDR--HPFLG--REVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAV 90 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEE--ETTTT--EEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEec--CccCC--CccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEE
Confidence 4567899999999999987542 11211 1122478999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccC
Q 014786 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (418)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 275 (418)
|+.+||||||++.+ ..+++++|+++..++.|++|+++|||.+...+++.|+|+...+.............++++++.++
T Consensus 91 d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~ 169 (325)
T 1lcy_A 91 DPVADIATLRIQTK-EPLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAID 169 (325)
T ss_dssp ETTTTEEEEECCCS-SCCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESSCCS
T ss_pred CCCCCEEEEEEcCC-CCCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcCCCC
Confidence 99999999999875 36889999877778999999999999998889999999877654222111122356899999999
Q ss_pred CCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc------ccccccccCeeecc--chhhhhh
Q 014786 276 PGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF------GKVTRPILGIKFAP--DQSVEQL 347 (418)
Q Consensus 276 ~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~------g~v~~~~lGv~~~~--~~~~~~~ 347 (418)
+|+|||||+|.+|+||||+++... .+++|+||++.++++++++.++ +++.++|||+.+.+ ...++.+
T Consensus 170 ~G~SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~~~~~ 244 (325)
T 1lcy_A 170 FGNAGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAEL 244 (325)
T ss_dssp TTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHHHHHH
T ss_pred CCCccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHHHHhh
Confidence 999999999999999999998753 4699999999999999998775 46789999999875 3345555
Q ss_pred Cc---------cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 348 GV---------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 348 ~~---------~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
++ .|++|.+|.+++||+++||++ ||+|++|||++|.+..|+.+++.. +++++|+|+
T Consensus 245 ~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GDvI~~ing~~v~~~~~l~~~l~~---~~~v~l~v~ 309 (325)
T 1lcy_A 245 QLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQNAEDVYEAVRT---QSQLAVQIR 309 (325)
T ss_dssp TTSCTTSCCCSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHHTT---CSSEEEEEE
T ss_pred CccccccccCCCCeEEEEeCcCChHHHCCCCC-----------CCEEEEECCEEcCCHHHHHHHHhC---CCeEEEEEE
Confidence 54 599999999999999999999 999999999999999999999975 567777663
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.2e-45 Score=366.02 Aligned_cols=282 Identities=32% Similarity=0.551 Sum_probs=161.7
Q ss_pred CCccchhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEE
Q 014786 111 LQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDA 190 (418)
Q Consensus 111 ~~~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a 190 (418)
.........++++++.||||+|...... .|. ..+...+.||||+|+++||||||+||+.+...+.|.+.+++.+++
T Consensus 9 ~~~~~~~~~~~~~~~~~sVV~I~~~~~~--~~~--~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a 84 (332)
T 3num_A 9 LRHKYNFIADVVEKIAPAVVHIELFRKL--PFS--KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEA 84 (332)
T ss_dssp HHHHHCHHHHHHHHHGGGEEEEEEEEEC--TTS--SCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEE
T ss_pred cccccchHHHHHHHhcCcEEEEEEEecc--ccC--CCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEE
Confidence 3445567789999999999999985422 111 112235789999999999999999999999999999999999999
Q ss_pred EEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEE
Q 014786 191 KIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQT 270 (418)
Q Consensus 191 ~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~ 270 (418)
+++..|+.+|||||+++.+ ..++++.++++..+..|+.|+++|||++...+.+.|+++...+.............++++
T Consensus 85 ~~~~~d~~~DlAlL~l~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~ 163 (332)
T 3num_A 85 KIKDVDEKADIALIKIDHQ-GKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQT 163 (332)
T ss_dssp EEEEEETTTTEEEEEECCS-SCCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEE
T ss_pred EEEEecCCCCeEEEEEcCC-CCCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEE
Confidence 9999999999999999875 358888998877899999999999999988899999998776643322222233467899
Q ss_pred ccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh---c--ccccccccCeeeccc--hh
Q 014786 271 DAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK---F--GKVTRPILGIKFAPD--QS 343 (418)
Q Consensus 271 ~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~---~--g~v~~~~lGv~~~~~--~~ 343 (418)
++.+++|+|||||+|.+|+||||+++... .+++|+||++.++++++++.+ . +.+.++|||+.+.+. ..
T Consensus 164 d~~i~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~ 238 (332)
T 3num_A 164 DAIINYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSK 238 (332)
T ss_dssp SSCCCTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC-------------------------
T ss_pred ECCcCCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHH
Confidence 99999999999999999999999998753 479999999999999999864 2 345799999998752 12
Q ss_pred hhhh-----C----ccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEE
Q 014786 344 VEQL-----G----VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSC 414 (418)
Q Consensus 344 ~~~~-----~----~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l 414 (418)
++.+ + ..|++|.+|.+++||+++||++ ||+|++|||++|.++.|+.+++.. |++++|
T Consensus 239 ~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l 304 (332)
T 3num_A 239 AKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKE-----------NDVIISINGQSVVSANDVSDVIKR---ESTLNM 304 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhhhhccccCCCCCceEEEEeccCCChHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhC---CCeEEE
Confidence 2222 1 1699999999999999999999 999999999999999999988864 677777
Q ss_pred EE
Q 014786 415 FT 416 (418)
Q Consensus 415 ~v 416 (418)
+|
T Consensus 305 ~v 306 (332)
T 3num_A 305 VV 306 (332)
T ss_dssp --
T ss_pred EE
Confidence 65
No 11
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=1.1e-38 Score=301.90 Aligned_cols=220 Identities=40% Similarity=0.673 Sum_probs=172.3
Q ss_pred hhHHHHHHHcCCceEEEEeeecccC--------cccccc-------ccCC-CeEEEEEEEcCCcEEEecccccCCCCeEE
Q 014786 116 LATVRLFQENTPSVVNITNLAARQD--------AFTLDV-------LEVP-QGSGSGFVWDSKGHVVTNYHVIRGASDIR 179 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~--------~~~~~~-------~~~~-~~~GSGfiI~~~G~ILT~aHvv~~~~~i~ 179 (418)
.+..++++++.||||.|.+...... +|.... .... .+.||||+|+++||||||+||+.+...+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~ 83 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNIT 83 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCE
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEE
Confidence 3577899999999999998754321 110000 0112 57899999998899999999999999999
Q ss_pred EEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccC
Q 014786 180 VTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA 259 (418)
Q Consensus 180 V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~ 259 (418)
|.+.|++.++++++.+|+.+||||||++.+...+++++|+++..+++|++|+++|||.+...+++.|+|+...+......
T Consensus 84 V~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~ 163 (239)
T 1l1j_A 84 VTMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPD 163 (239)
T ss_dssp EECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTT
T ss_pred EEECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEeccccccccCC
Confidence 99999999999999999999999999987534689999988777899999999999999888999999998877633211
Q ss_pred CCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcccccccccCe
Q 014786 260 TGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPILGI 336 (418)
Q Consensus 260 ~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv 336 (418)
....+..++++|+.+++|+|||||+|.+|+||||+++... .++..+++|+||++.+++++++|+++|++.|+|||+
T Consensus 164 ~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~~~~~~~~l~~~g~v~r~~lGv 239 (239)
T 1l1j_A 164 GSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINTVKKFLDTILTQKKVEKAYLGV 239 (239)
T ss_dssp SSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred CccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHHHHHHHHHHHHCCCCccceeCc
Confidence 1112457899999999999999999999999999998765 344568999999999999999999999999999996
No 12
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.1e-37 Score=296.04 Aligned_cols=213 Identities=40% Similarity=0.651 Sum_probs=163.9
Q ss_pred hHHHHHHHcCCceEEEEeeecccC----------cccc---cc-ccCCCeEEEEEEEcCC-cEEEecccccCCCCeEEEE
Q 014786 117 ATVRLFQENTPSVVNITNLAARQD----------AFTL---DV-LEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (418)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~----------~~~~---~~-~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V~ 181 (418)
+..++++++.||||.|.+...... +|.. +. .....+.||||||+++ ||||||+||++++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~ 93 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEEE
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEE
Confidence 467899999999999988764431 1110 00 0112578999999988 9999999999999999999
Q ss_pred eCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCC
Q 014786 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (418)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~ 261 (418)
+.|++.++++++..|+.+||||||++.+ ..+++++++++..+++|++|+++|||++...+++.|+|+...+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~-~~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~---~~ 169 (245)
T 3sti_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNP-SKLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (245)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSC-CSCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSS---CC
T ss_pred ECCCCEEEEEEEEecCCCCEEEEEeccC-CCCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 9999999999999999999999999764 4689999988888999999999999999999999999998766411 11
Q ss_pred CCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcccccccc
Q 014786 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVTRPI 333 (418)
Q Consensus 262 ~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~ 333 (418)
..+.+++++|+.+++|+|||||||.+|+||||+++.....++..+++||||++.+++++++|+++|++.++|
T Consensus 170 ~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~~~~ 241 (245)
T 3sti_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEILEHH 241 (245)
T ss_dssp TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC---
T ss_pred CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCCCcc
Confidence 234567999999999999999999999999999998877666789999999999999999999999987765
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=1.1e-35 Score=280.97 Aligned_cols=213 Identities=37% Similarity=0.554 Sum_probs=178.2
Q ss_pred chhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEE
Q 014786 115 ELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVG 194 (418)
Q Consensus 115 ~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~ 194 (418)
..+..++++++.+|||+|......... .......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++.
T Consensus 19 ~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv~ 95 (237)
T 3lgi_A 19 PASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVG 95 (237)
T ss_dssp CCBCHHHHHHHGGGEEEEEEECCTTTC---TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEEE
T ss_pred CcCHHHHHHHhCCcEEEEEEEecccCc---ccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEEE
Confidence 345678899999999999987544321 01112357899999999899999999999999999999999999999999
Q ss_pred EcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEcccc
Q 014786 195 FDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 274 (418)
Q Consensus 195 ~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i 274 (418)
.|+.+||||||++.+. .+++++++++..+..|+.|+++|||++.....+.|+|+...+.... ......++++++.+
T Consensus 96 ~d~~~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d~~i 171 (237)
T 3lgi_A 96 SDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTDASI 171 (237)
T ss_dssp EETTTTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCC---TTSCSCCEEECSCC
T ss_pred EcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEeccccccc---CCCcCCEEEEcCcc
Confidence 9999999999998753 4888999877789999999999999998889999999877664322 12335678999999
Q ss_pred CCCCCCCceeCCCceEEEEEeeeeCCCC---CCCCccceeecccchhhhhhhhhccccccccc
Q 014786 275 NPGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDTVNGIVDQLVKFGKVTRPIL 334 (418)
Q Consensus 275 ~~G~SGGPl~n~~G~VVGI~s~~~~~~~---~~~~~~~aIp~~~i~~~l~~l~~~g~v~~~~l 334 (418)
++|+|||||+|.+|+||||+++.+.... ...+++|+||++.+++++++|+++|+..++|+
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~~~~~ 234 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRHHH 234 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCCC---
T ss_pred CCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCCCchh
Confidence 9999999999999999999998776532 46689999999999999999999999987764
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=4e-34 Score=269.41 Aligned_cols=204 Identities=36% Similarity=0.575 Sum_probs=165.7
Q ss_pred CccchhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEE
Q 014786 112 QTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK 191 (418)
Q Consensus 112 ~~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~ 191 (418)
........++++++.+|||+|...... +|.. .....+.||||+|+++||||||+||+.+...+.|.+.+++.++++
T Consensus 27 ~~~~~~~~~~~~~~~~sVV~I~~~~~~--~~~~--~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~ 102 (231)
T 3tjo_A 27 RHKYNFIADVVEKIAPAVVHIELFRKL--PFSK--REVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAK 102 (231)
T ss_dssp HHHSCHHHHHHHHHGGGEEEEEEEEEC--TTSS--CEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEE
T ss_pred cchhhHHHHHHHHhcCcEEEEEEEecc--ccCC--CccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEE
Confidence 334456788999999999999986532 1111 112247899999999899999999999999999999999999999
Q ss_pred EEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEc
Q 014786 192 IVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTD 271 (418)
Q Consensus 192 vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~ 271 (418)
++..|+.+|||||+++.+ ..++++.++++..+..|+.|+++|||++...+.+.|+++...+.............+++++
T Consensus 103 v~~~d~~~DlAlL~l~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d 181 (231)
T 3tjo_A 103 IKDVDEKADIALIKIDHQ-GKLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTD 181 (231)
T ss_dssp EEEEETTTTEEEEECCCS-SCCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEES
T ss_pred EEEecCCCCEEEEEecCC-CCCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEc
Confidence 999999999999999865 3688899987778999999999999999888899999987766433222222334678999
Q ss_pred cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 ~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
+.+++|+|||||+|.+|+||||+++... .+++||||++.++++++++++
T Consensus 182 a~i~~G~SGGPLv~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 182 AIINYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp SCCCTTTTTSEEECTTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHHT
T ss_pred CCcCCCCchhHeecCCCeEEEEEeEEec-----CCeEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999999999998753 479999999999999999875
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.98 E-value=8.1e-31 Score=247.42 Aligned_cols=198 Identities=28% Similarity=0.423 Sum_probs=162.0
Q ss_pred hhHHHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEE
Q 014786 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (418)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (418)
....++++++.+|||+|........ ..+.||||+|+ +||||||+||+.+...+.|.+.+ +.+.++++.+
T Consensus 31 ~~~~~~~~~~~~svV~I~~~~~~~~---------~~~~GsG~iI~-~~~VlTaaH~v~~~~~~~V~~~~-~~~~~~~v~~ 99 (237)
T 3k6y_A 31 LVNNPVVAATEPSVVKIRSLAPRCQ---------KVLEGTGFVIS-PDRVMTNAHVVAGSNNVTVYAGD-KPFEATVVSY 99 (237)
T ss_dssp GGGCHHHHHHGGGEEEEEEEEGGGT---------EEEEEEEEEEE-TTEEEECGGGTTTCSEEEEEETT-EEEECEEEEE
T ss_pred cccHHHHHHhcCCEEEEEEEecCCC---------cceeEEEEEEE-CCEEEECHHHcCCCceEEEEECC-cEEEEEEEEE
Confidence 3446789999999999998653221 25689999999 67999999999999999999988 4899999999
Q ss_pred cCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccC--CCC-CcccEEEEcc
Q 014786 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAA--TGR-PIQDVIQTDA 272 (418)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~--~~~-~~~~~i~~~~ 272 (418)
|+.+||||||++. ..++++.|+ +..+..|+.++++|||++.......|.++...+...... .+. ....++++++
T Consensus 100 ~~~~DiAll~l~~--~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (237)
T 3k6y_A 100 DPSVDVAILAVPH--LPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA 176 (237)
T ss_dssp ETTTTEEEEECTT--CCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES
T ss_pred cCCCCEEEEEeCC--CCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecC
Confidence 9999999999985 468889997 567899999999999999888888888876554332211 111 3346789999
Q ss_pred ccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhccccc
Q 014786 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGKVT 330 (418)
Q Consensus 273 ~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~v~ 330 (418)
.+++|+|||||+|.+|+||||+++.... ..+++|+||++.++++++++.....+.
T Consensus 177 ~~~~GdSGGPLv~~~G~vvGI~s~~~~~---~~~~~~aip~~~v~~~l~~~~~~~~v~ 231 (237)
T 3k6y_A 177 DVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGEVAGQLAKIGATQPVG 231 (237)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEECSS---STTEEEEEEHHHHHGGGGGTTCCSCCC
T ss_pred ccCCCccHHHEECCCCEEEEEEEeeccC---CCcEEEEEEHHHHHHHHHHccCCCCCC
Confidence 9999999999999999999999987542 347999999999999999996555553
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.91 E-value=2e-23 Score=185.72 Aligned_cols=137 Identities=21% Similarity=0.333 Sum_probs=105.0
Q ss_pred CCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCE
Q 014786 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQK 229 (418)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~ 229 (418)
..+.||||+| +||||||+|||+++..++|++ |++.++++++ .|+..||||||++.....+++++++++.. .+.
T Consensus 19 ~~~~GSGfii--~g~IlTn~HVV~~~~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~~---~~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS--GNDIVTAAHVVGNNTFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNPD---YSC 91 (163)
T ss_dssp TTEEEEEEEE--TTEEEEEHHHHTTCSEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSCC---TTE
T ss_pred CceeEEEEEE--CCEEEecHHHhCCCceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCCC---CCE
Confidence 3679999999 589999999999999999999 9999999999 89999999999987544455566765432 489
Q ss_pred EEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccc
Q 014786 230 VYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGF 309 (418)
Q Consensus 230 V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~ 309 (418)
|+++|||.+. . .++...... ..+.+.+++++++|+|||||||.+|+||||++.... ..+ ||
T Consensus 92 v~~~G~p~~~---~---~~s~~~~~~--------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g----~~g-g~ 152 (163)
T 2w5e_A 92 VTVMAYVNED---L---VVSTAAAMV--------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTG----YTG-GA 152 (163)
T ss_dssp EEEEEEETTE---E---EEEEEEEEE--------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEET----TEE-EE
T ss_pred EEEEEeCCCC---E---EEEEeccEE--------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCcc----ccc-CE
Confidence 9999999652 1 111111110 124567789999999999999999999999986532 233 66
Q ss_pred eee
Q 014786 310 SIP 312 (418)
Q Consensus 310 aIp 312 (418)
+|.
T Consensus 153 ai~ 155 (163)
T 2w5e_A 153 VII 155 (163)
T ss_dssp EEC
T ss_pred EEe
Confidence 664
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.88 E-value=1.5e-22 Score=187.32 Aligned_cols=179 Identities=23% Similarity=0.415 Sum_probs=132.1
Q ss_pred CCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCC---eEEEEe----CCCcEEEEE-EEEEcC
Q 014786 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYDAK-IVGFDQ 197 (418)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~----~dg~~~~a~-vv~~d~ 197 (418)
.+++|+|... ..-+|... .....|+||+|++ +||||||||+.+.. .+.|.. .+++.+.++ ++.+|+
T Consensus 2 ~~~~~~i~~~--~~~P~~v~---~~~~~c~G~lI~~-~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~ 75 (210)
T 2as9_A 2 EKNVTQVKDT--NNFPYNGV---VSFKDATGFVIGK-NTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPG 75 (210)
T ss_dssp CCCEEECSCT--TSTTGGGE---EECSSCEEEEEET-TEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSS
T ss_pred CCceEEeecC--CcCCeEEE---EEeeeEEEEEEeC-CEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCC
Confidence 3467777442 22233321 1135799999997 69999999997643 566654 467788884 778889
Q ss_pred CCCeEEEEecCCC-----------CCCcccccCCCCCCCCCCEEEEEeCCCCCCCc----eeEeEEeeeeeeecccCCCC
Q 014786 198 DKDVAVLRIDAPK-----------DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGR 262 (418)
Q Consensus 198 ~~DlAlLkv~~~~-----------~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~----~~~G~Vs~~~~~~~~~~~~~ 262 (418)
..|||||+++.+. ..++++.+. ..+..|+.++++|||.+.... ...|+++...
T Consensus 76 ~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~---------- 143 (210)
T 2as9_A 76 DEDISVMNIEEQAVERGPKGFNFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK---------- 143 (210)
T ss_dssp SSSCEEEEECSEEEEEETTEEEGGGSCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE----------
T ss_pred CCcEEEEEecCccccccccccccccccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc----------
Confidence 9999999998631 135677774 467899999999999865443 3566665431
Q ss_pred CcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 263 PIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 263 ~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...+++++.+++|+|||||+|.+|+||||++++..+.+ .+..+|++|.+.++++++...+
T Consensus 144 --~~~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~-~~~~~~~~~~~~i~~f~~~~~~ 203 (210)
T 2as9_A 144 --DNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIG-SEYNGAVYFTPQIKDFIQKHIE 203 (210)
T ss_dssp --TTEEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTT-CSSEEEEECCHHHHHHHHTTCC
T ss_pred --CCeEEEcCccCCCCccCcEECCCCeEEEEEecccccCC-ccccccEEEcHHHHHHHHHhhh
Confidence 24678899999999999999989999999998876443 4567899999999999987654
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.86 E-value=1.5e-21 Score=184.24 Aligned_cols=161 Identities=26% Similarity=0.440 Sum_probs=118.8
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCe--EEEEeCCC-------------cEEEEEEEEEcC---CCCeEEEEecCCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASD--IRVTFADQ-------------SAYDAKIVGFDQ---DKDVAVLRIDAPKD- 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~--i~V~~~dg-------------~~~~a~vv~~d~---~~DlAlLkv~~~~~- 211 (418)
...|+||+|++ +||||||||+.+... +.|.+.+| ..+.++.+..|+ .+|||||+++.+..
T Consensus 54 ~~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~ 132 (242)
T 1agj_A 54 QTSATGVLIGK-NTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNG 132 (242)
T ss_dssp TEEEEEEECSS-SEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CccEEEEEEeC-CEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcc
Confidence 45899999986 599999999976543 34444332 347788888887 88999999987631
Q ss_pred -----CCcccccCCCCCCCCCCEEEEEeCCCCCCCc-eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeC
Q 014786 212 -----KLRPIPIGVSADLLVGQKVYAIGNPFGLDHT-LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (418)
Q Consensus 212 -----~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~-~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n 285 (418)
.++++.|.+...+..|+.++++|||.+.... .....+... . ....+++++.+++|+|||||+|
T Consensus 133 ~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~-----~------~~~~~~~~~~~c~GdSGGPl~~ 201 (242)
T 1agj_A 133 VSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELT-----T------LSRGLRYYGFTVPGNSGSGIFN 201 (242)
T ss_dssp CCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEEC-----C------GGGSEEEECCCCGGGTTCEEEC
T ss_pred ccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEe-----c------CCceEEEeCCcCCCCCchHhcc
Confidence 3788888766668899999999999875532 222222110 0 1234677889999999999999
Q ss_pred CCceEEEEEeeeeCCCCCCCCccceeecc-cchhhhhhh
Q 014786 286 SSGSLIGINTAIYSPSGASSGVGFSIPVD-TVNGIVDQL 323 (418)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~~~aIp~~-~i~~~l~~l 323 (418)
.+|+||||++++........+.+|++|+. .+++++++.
T Consensus 202 ~~g~lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 202 SNGELVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp TTSEEEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred cCCEEEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 89999999999865433445789999996 777777764
No 19
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.83 E-value=1.5e-20 Score=172.12 Aligned_cols=155 Identities=25% Similarity=0.396 Sum_probs=110.5
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCe----EEEEe----CCCcEEEE-EEEEEcCCCCeEEEEecCCC-------CCCcc
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASD----IRVTF----ADQSAYDA-KIVGFDQDKDVAVLRIDAPK-------DKLRP 215 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~----~dg~~~~a-~vv~~d~~~DlAlLkv~~~~-------~~~~~ 215 (418)
..|+||+|++ +||||||||+.+... +.+.. .+++.+.+ +++.+|+.+||||||++.+. +.+++
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~p 100 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSY 100 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCC
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccccccc
Confidence 4699999996 599999999975433 55543 46677877 47788889999999998741 13566
Q ss_pred cccCCCCCCCCCCEEEEEeCCCCCCCc----eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEE
Q 014786 216 IPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLI 291 (418)
Q Consensus 216 ~~l~~~~~~~~G~~V~~vG~p~g~~~~----~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VV 291 (418)
+.|. ..+..|+.++++|||++.... .+.|+++... ..++++++.+++|+|||||+|.+|+||
T Consensus 101 i~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g~lv 166 (200)
T 2w7s_A 101 TKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDAYAQPGNSGSPVLNSKHELI 166 (200)
T ss_dssp CCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECSCCCTTCTTCEEECTTSCEE
T ss_pred eecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcceeCCCCccCeEECcCCEEE
Confidence 6664 357889999999999864332 3556665421 245788899999999999999899999
Q ss_pred EEEeeeeCCCCCCCCcccee-ecccchhhhhhh
Q 014786 292 GINTAIYSPSGASSGVGFSI-PVDTVNGIVDQL 323 (418)
Q Consensus 292 GI~s~~~~~~~~~~~~~~aI-p~~~i~~~l~~l 323 (418)
||++++.... ....+|++ ....+++++++.
T Consensus 167 GI~s~g~~~~--~~~~~~~v~~~~~~~~wI~~~ 197 (200)
T 2w7s_A 167 GILYAGSGKD--ESEKNFGVYFTPQLKEFIQNN 197 (200)
T ss_dssp EEEEEEC------CCCEEEEECCHHHHHHHHHT
T ss_pred EEEeccccCC--CCccceeeecHHHHHHHHHhh
Confidence 9999875431 12344555 335556666553
No 20
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.83 E-value=6.9e-20 Score=168.08 Aligned_cols=158 Identities=19% Similarity=0.215 Sum_probs=122.5
Q ss_pred EEEEEEEcCC--cEEEecccccCCCCeEEEEeCCCcEEEEEEEEEc-CCCCeEEEEecCCCCCCcc-------cccCCCC
Q 014786 153 SGSGFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRP-------IPIGVSA 222 (418)
Q Consensus 153 ~GSGfiI~~~--G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~-------~~l~~~~ 222 (418)
.-+||+++++ +|||||+||+++...+. .|+ .+.++++..| +..|+||||++.+....+. +++....
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~~~-~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNATAR---IGG-AVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEE---ETT-EEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CCcCEEEecCCeeEEEECcccCCCCCEEE---eCC-cEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 4479999753 68999999999888776 454 8889999999 9999999999874211222 2345566
Q ss_pred CCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeee-CCC
Q 014786 223 DLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY-SPS 301 (418)
Q Consensus 223 ~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~-~~~ 301 (418)
.+++|+.|..+|+|.+ .+.|+|+.+.+.... .. ..+.+++++++.+++|+|||||+|.+|++|||+++.. ...
T Consensus 93 ~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~-~~-g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~ 166 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG----YQCGTITAKNVTANY-AE-GAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSN 166 (198)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-TT-EEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTT
T ss_pred cCCCCCeEEEeecCcc----eEEEEEEeeeeEEEe-CC-CeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccC
Confidence 7999999999999876 689999998876542 11 1245789999999999999999999999999999873 221
Q ss_pred -C-----CCCCccceeecccchhhh
Q 014786 302 -G-----ASSGVGFSIPVDTVNGIV 320 (418)
Q Consensus 302 -~-----~~~~~~~aIp~~~i~~~l 320 (418)
+ ..++++|++|++.+++.+
T Consensus 167 ~~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 167 GNNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp SBSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CCccccccCCceEEEEEHHHHHHHC
Confidence 1 234799999998876554
No 21
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.81 E-value=5.8e-19 Score=169.90 Aligned_cols=158 Identities=20% Similarity=0.315 Sum_probs=114.7
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCe----EEEEeC--------CCcEEEEEEEEEcCCCCeEEEEecCCC------CC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASD----IRVTFA--------DQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~~--------dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (418)
...|+||+|+++ ||||||||+.+... +.|++. +++....+++..+..+||||||++.+. ..
T Consensus 33 ~~~C~G~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (274)
T 2o8l_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (274)
T ss_dssp EEEEEEEEEETT-EEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTS
T ss_pred CEEEEEEEEECC-EEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCcccccccccc
Confidence 357999999975 99999999976543 777642 344445667777788999999998752 35
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCce
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~ 289 (418)
++++.|.....+..|+.++++|||.+.... ...|.+.... ..+++.++.+++|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (274)
T 2o8l_A 112 VKPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (274)
T ss_dssp SCCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESCCCCTTCTTCEEECTTSC
T ss_pred cccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------CCeEEeCcccCCCCchhheeccCCe
Confidence 788888765567889999999999765432 2344443221 2467888999999999999998999
Q ss_pred EEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 290 LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 290 VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||++++.... .+.++++. ..++.++++.++
T Consensus 180 lvGIvS~G~~~~---~~~~~~~~-~~~~~wI~~~i~ 211 (274)
T 2o8l_A 180 VIGIHWGGVPNE---FNGAVFIN-ENVRNFLKQNIE 211 (274)
T ss_dssp EEEEEEEEETTT---EEEEEECC-HHHHHHHHHHCT
T ss_pred EEEEEeCcccCC---CCceEEec-HHHHHHHHHHHh
Confidence 999999986432 23455553 455666666554
No 22
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.80 E-value=1.1e-18 Score=167.50 Aligned_cols=158 Identities=20% Similarity=0.310 Sum_probs=114.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCC----eEEEEeC--------CCcEEEEEEEEEcCCCCeEEEEecCCC------CC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTFA--------DQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~----~i~V~~~--------dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (418)
...|+||+|+++ ||||||||+.+.. .+.|++. +++....+++..+..+||||||++.+. ..
T Consensus 33 ~~~CgG~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (268)
T 1wcz_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (268)
T ss_dssp EEEEEEEECSSS-EEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHH
T ss_pred CEEEEEEEEECC-EEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCcccccccccc
Confidence 358999999875 9999999997643 3777643 344445667777788999999998753 23
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCCC---ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCce
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH---TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~~---~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~ 289 (418)
+.++.|.....+..|+.++++|||.+... ....|.++... ..+++.++.+++|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (268)
T 1wcz_A 112 VKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (268)
T ss_dssp SCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESBCCCTTCTTCEEECTTSC
T ss_pred cceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC------------CCeEEEecccCCCCccCeEEccCCE
Confidence 67788876556788999999999976432 22344444221 2467889999999999999998999
Q ss_pred EEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 290 LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 290 VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||++++... + .+.++++. ..++.++++.++
T Consensus 180 lvGIvS~G~~~-~--~~~~~~~~-~~~~~wI~~~i~ 211 (268)
T 1wcz_A 180 VIGIHWGGVPN-E--FNGAVFIN-ENVRNFLKQNIE 211 (268)
T ss_dssp EEEEEEEEETT-T--EEEEEECC-HHHHHHHHHHCT
T ss_pred EEEEEeCCccC-C--cceeEEcC-HHHHHHHHHHHH
Confidence 99999988642 1 23456664 556677766554
No 23
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.80 E-value=5.2e-19 Score=161.77 Aligned_cols=157 Identities=23% Similarity=0.418 Sum_probs=109.3
Q ss_pred eEEEEEEEcCCcEEEecccccCCCC---eEEEEe----CCCcEEE-EEEEEEcCCCCeEEEEecCCC-----------CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYD-AKIVGFDQDKDVAVLRIDAPK-----------DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~----~dg~~~~-a~vv~~d~~~DlAlLkv~~~~-----------~~ 212 (418)
+.|+||+|+++ ||||||||+.+.. .+.+.. .++..+. .+++.++..+|||||+++.+. ..
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~ 100 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDN 100 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEEHHHH
T ss_pred eeEEEEEEECC-EEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccccccccccccc
Confidence 47999999976 9999999998754 455532 3456666 567777788999999998531 12
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCCC----ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCc
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSG 288 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~~----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G 288 (418)
++++.+.. .+..|+.++++|||.+... ....|.++... ...++.++.+++|+|||||+|.+|
T Consensus 101 v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g 166 (204)
T 2vid_A 101 VTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSAHTESGNSGSPVLNSNN 166 (204)
T ss_dssp CCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECCCCCGGGTTCEEECTTS
T ss_pred ccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEecccCCCCccCcEECCCC
Confidence 46666753 5788999999999976543 23445554321 246788899999999999999999
Q ss_pred eEEEEEeeeeCCCCCCCCcccee-ecccchhhhhhhh
Q 014786 289 SLIGINTAIYSPSGASSGVGFSI-PVDTVNGIVDQLV 324 (418)
Q Consensus 289 ~VVGI~s~~~~~~~~~~~~~~aI-p~~~i~~~l~~l~ 324 (418)
+||||++++.... .....+|.+ +...+++++++.+
T Consensus 167 ~lvGI~s~g~~~~-~~~~~~~~~~~~~~~~~wI~~~~ 202 (204)
T 2vid_A 167 ELVGIHFASDVKN-DDNRNAYGVYFTPEIKKFIAENI 202 (204)
T ss_dssp CEEEEEEEECC----CCCCEEEECCCHHHHHHHHHHS
T ss_pred eEEEEEecCccCC-CcccccceeEeCHHHHHHHHhhc
Confidence 9999999875311 122345544 2355666666543
No 24
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.79 E-value=1.6e-19 Score=171.02 Aligned_cols=144 Identities=24% Similarity=0.350 Sum_probs=106.3
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCC----eEEEEeCC------------CcEEEEEEEEEcC---CCCeEEEEecCCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTFAD------------QSAYDAKIVGFDQ---DKDVAVLRIDAPKD 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~----~i~V~~~d------------g~~~~a~vv~~d~---~~DlAlLkv~~~~~ 211 (418)
...|+||+|+++ ||||||||+.+.. .+.+.... ...+.++.+..|+ .+|||||+++.+..
T Consensus 47 ~~~c~G~lI~~~-~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~ 125 (246)
T 1qtf_A 47 STLATGVLIGKN-TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEK 125 (246)
T ss_dssp TEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTT
T ss_pred CceEEEEEEECC-EEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcc
Confidence 468999999974 9999999997654 36655432 1368888888888 89999999987531
Q ss_pred ------CCcccccCCCCCCCCCCEEEEEeCCCCCCCce-eEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCcee
Q 014786 212 ------KLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL-TTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLL 284 (418)
Q Consensus 212 ------~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~-~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~ 284 (418)
.++++.|.+...+..|+.++++|||.+..... ....+ .... .+++++.+++|+|||||+
T Consensus 126 ~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~-------~~~~-------~~~~~~~~~~GdSGGPlv 191 (246)
T 1qtf_A 126 GESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQI-------EMFN-------DSQYFGYTEVGNSGSGIF 191 (246)
T ss_dssp SCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEE-------EESS-------SSBEESCCCGGGTTCEEE
T ss_pred ccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeee-------eecC-------cEEEeCCCCCCCchhheE
Confidence 37788887666688999999999998865421 11111 1000 123456789999999999
Q ss_pred CCCceEEEEEeeeeCCCCCCCCccceeecccch
Q 014786 285 DSSGSLIGINTAIYSPSGASSGVGFSIPVDTVN 317 (418)
Q Consensus 285 n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~ 317 (418)
|.+|+||||++++.. ++++|++.+.
T Consensus 192 ~~~g~lvGI~s~g~~--------~~~ipi~~~~ 216 (246)
T 1qtf_A 192 NLKGELIGIHSGKGG--------QHNLPIGVFF 216 (246)
T ss_dssp CTTCCEEEEEEEEET--------TTTEEEEEET
T ss_pred CCCCEEEEEEecccc--------Cccccchhhh
Confidence 999999999998742 5788876554
No 25
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.78 E-value=3.3e-18 Score=155.52 Aligned_cols=159 Identities=18% Similarity=0.261 Sum_probs=117.1
Q ss_pred eEE-EEEEEcCC--cEEEecccccCCCCeEEEEeCCCcEEEEEEEEEc-CCCCeEEEEecCCCCCCcccc--------cC
Q 014786 152 GSG-SGFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRPIP--------IG 219 (418)
Q Consensus 152 ~~G-SGfiI~~~--G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~~~--------l~ 219 (418)
..| +||+++++ +|||||+||+++...+. ..++....+++...+ +..|+||||++.+....+.+. +.
T Consensus 12 ~~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~~~i~ 89 (187)
T 1hpg_A 12 SRCSAAFNVTKGGARYFVTAGHCTNISANWS--ASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDIS 89 (187)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEEE--SSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSSSCEEECC
T ss_pred CcCcceEEEEECCeeEEEECcccCCCCCeEE--eCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecCCceeeec
Confidence 345 59999875 49999999999887654 456654556666555 788999999987432223332 33
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeC
Q 014786 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (418)
Q Consensus 220 ~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~ 299 (418)
.+..+++|+.|+++|+|.+ .+.|+|+.+.+.... . .....+++++++.+++|+|||||++. +++|||+++...
T Consensus 90 ~~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~-~-~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~ 162 (187)
T 1hpg_A 90 SAANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNY-G-DGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSG 162 (187)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-T-TEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESC
T ss_pred cccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEe-C-CCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCC
Confidence 4567899999999999865 688999988876532 1 12245789999999999999999986 599999998753
Q ss_pred CCCCCCCccceeecccchhhh
Q 014786 300 PSGASSGVGFSIPVDTVNGIV 320 (418)
Q Consensus 300 ~~~~~~~~~~aIp~~~i~~~l 320 (418)
.+ ...+.+|++|++.+++.+
T Consensus 163 ~~-~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 163 CS-GTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp CB-TTBCCCEEEEHHHHHHHH
T ss_pred CC-CCCCceEEEEHHHHHHHc
Confidence 22 235789999997766544
No 26
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.76 E-value=2.9e-18 Score=155.19 Aligned_cols=163 Identities=24% Similarity=0.346 Sum_probs=116.0
Q ss_pred CeEEE-EEEEcC--CcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEc-CCCCeEEEEecC-CC---CCCcccccCCCC
Q 014786 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDA-PK---DKLRPIPIGVSA 222 (418)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~-~~---~~~~~~~l~~~~ 222 (418)
...|| ||++.. ++|||||+||+.+...+.+...++..+ +++...+ +.+||||||++. +. ..++++.+....
T Consensus 11 ~~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~~~~~~-g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 11 TGRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTVL-GTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp SCEEECCEEEEETTEEEEEECHHHHTTCSEEESSTTSCSEE-EEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCcEEecCCCceEe-EEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 34676 999964 369999999999988887765544443 5556667 889999999987 32 123556665445
Q ss_pred CCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCC
Q 014786 223 DLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSG 302 (418)
Q Consensus 223 ~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~ 302 (418)
.+..|+.++++||+.+ .+.+.+..+..... +..+..+...++.+..+++|+|||||++.+ +++||+++....+
T Consensus 90 ~~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~-~~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~- 162 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG----THSGSVTALNATVN-YGGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNC- 162 (185)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CSTTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEET-
T ss_pred cCCCCCEEEEecCCCc----eeEeEEEEEEEEEE-cCCCCEEeceEEecccCCCCCccceEEECC-EEEEEEEecCCCC-
Confidence 6788999999999753 45677776655432 111111234667777889999999999865 9999999875422
Q ss_pred CCCCccceeecccchhhhh
Q 014786 303 ASSGVGFSIPVDTVNGIVD 321 (418)
Q Consensus 303 ~~~~~~~aIp~~~i~~~l~ 321 (418)
.....+++.|++.++++++
T Consensus 163 ~~~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 163 SSGGTTFFQPVTEALSAYG 181 (185)
T ss_dssp TTEEEEEEEEHHHHHHHHT
T ss_pred CCCCcEEEEEHHHHHHhhC
Confidence 2346788999988877764
No 27
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.76 E-value=6.6e-18 Score=153.65 Aligned_cols=155 Identities=18% Similarity=0.244 Sum_probs=117.2
Q ss_pred eEEEEEEEc-CCc--EEEecccccCCCCeEEEEeCCCcEEEEEEEEEc-CCCCeEEEEecCCCCCCcc---------ccc
Q 014786 152 GSGSGFVWD-SKG--HVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRP---------IPI 218 (418)
Q Consensus 152 ~~GSGfiI~-~~G--~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~---------~~l 218 (418)
...+||++. ++| |||||+||+++...+ ...| +.++++..| +..|+||||++.+....+. +++
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 456899995 478 999999999766654 3455 889999999 9999999999864311221 246
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeee
Q 014786 219 GVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (418)
Q Consensus 219 ~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~ 298 (418)
..+..+++|+.|..+|+|.+ .+.|+|+.+.+.... .. ..+.++++++..+.+|+|||||+ .+|+++||+++..
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~-~~-~~~~~~~~~~~~~~~GDSGgpl~-~~~~~vGi~s~~~ 161 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSY-PQ-GTVHSLTRTSVCAEPGDSGGSFI-SGTQAQGVTSGGS 161 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-TT-EEEEEEEEESCCCCTTCTTCEEE-ETTEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEe-CC-CcEeeeEeeeeecCCCCccceEE-ECCEEEEEEeccC
Confidence 66677999999999999976 578999988876532 11 12346788888889999999999 4889999999875
Q ss_pred CCCCCCCCccceeecccchhh
Q 014786 299 SPSGASSGVGFSIPVDTVNGI 319 (418)
Q Consensus 299 ~~~~~~~~~~~aIp~~~i~~~ 319 (418)
..+ ...+++|++|++.+.+.
T Consensus 162 ~~~-~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 162 GNC-RTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp EET-TTEEEEEEEESHHHHHH
T ss_pred CCC-CCCCceEEEEHHHHHHH
Confidence 322 23467999998766554
No 28
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.75 E-value=2.4e-18 Score=148.12 Aligned_cols=101 Identities=37% Similarity=0.603 Sum_probs=92.0
Q ss_pred CCccceeecccchhhhhhhhhcccccccccCeeeccc-----hhhhhhCc-----cCcEEEecCCCChhhhcCccccccc
Q 014786 305 SGVGFSIPVDTVNGIVDQLVKFGKVTRPILGIKFAPD-----QSVEQLGV-----SGVLVLDAPPNGPAGKAGLLSTKRD 374 (418)
Q Consensus 305 ~~~~~aIp~~~i~~~l~~l~~~g~v~~~~lGv~~~~~-----~~~~~~~~-----~G~~V~~v~~~~pa~~aGl~~~~~~ 374 (418)
+|+|||||++.+++++++|+++|++.|+|||+.+++. ..++.+|+ .|++|.+|.++|||+ +||++
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~---- 76 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVTRPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEK---- 76 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSSCCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCS----
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEeeeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCC----
Confidence 5799999999999999999999999999999998752 34566775 589999999999999 99999
Q ss_pred cCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 375 AYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 375 ~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
||+|++|||++|.++.|+.+++...++|++++++|+
T Consensus 77 -------GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~ 112 (134)
T 2l97_A 77 -------YDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYY 112 (134)
T ss_dssp -------SCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEE
T ss_pred -------CCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 999999999999999999999998888999999874
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.71 E-value=6.1e-17 Score=147.37 Aligned_cols=151 Identities=22% Similarity=0.339 Sum_probs=112.4
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEc-CCCCeEEEEecCCCCCCc--------ccccCCCCC
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIGVSAD 223 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~~~l~~~~~ 223 (418)
.-+||+++. +||||+||+++.+.+. ..| ++++..| +..|+||||++.+....+ ++++..+..
T Consensus 17 CT~Gf~~~~--~ilTa~Hc~~~~~~v~--~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~ 87 (189)
T 2ea3_A 17 CSIGFAVNG--GFITAGHCGRTGATTA--NPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTA 87 (189)
T ss_dssp EECCEEETT--EEEECGGGCCTTCEEE--TTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCC
T ss_pred CccCEEccC--eEEEchhcCCCCCEEE--eCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcC
Confidence 447999964 9999999999877654 444 6788888 899999999987431112 234666667
Q ss_pred CCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCC
Q 014786 224 LLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (418)
Q Consensus 224 ~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~ 303 (418)
+++|+.|..+|++.+ .+.|+|+.+.+.... .. ..+.++++++..+.+|+|||||++ +|+++||+++....+ .
T Consensus 88 ~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~-~~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c-~ 159 (189)
T 2ea3_A 88 APVGSAVCRSGSTTG----WHCGTITALNSSVTY-PE-GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNC-R 159 (189)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEE-TT-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEET-T
T ss_pred CCCCCEEEEEEeCCc----cEEEEEEecceEEEe-CC-ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCC-C
Confidence 899999999999876 578999888776531 11 123457888888999999999995 889999999875322 2
Q ss_pred CCCccceeecccchhhh
Q 014786 304 SSGVGFSIPVDTVNGIV 320 (418)
Q Consensus 304 ~~~~~~aIp~~~i~~~l 320 (418)
..+.+|++|++.+++.+
T Consensus 160 ~~~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 160 TGGTTFFQPVNPILQAY 176 (189)
T ss_dssp TEEEEEEEEHHHHHHHH
T ss_pred CCCcEEEEEHHHHHHHC
Confidence 34689999987665443
No 30
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.70 E-value=3.4e-17 Score=148.62 Aligned_cols=153 Identities=19% Similarity=0.287 Sum_probs=113.3
Q ss_pred EE-EEEEEcC--CcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEc-CCCCeEEEEecCCCCCCc--------ccccCC
Q 014786 153 SG-SGFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIGV 220 (418)
Q Consensus 153 ~G-SGfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~~~l~~ 220 (418)
.| +||++.+ ++|||||+||+++.+.+.+ +.++++..| +..|+||||++.+....+ ++++..
T Consensus 15 ~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~ 87 (186)
T 2pfe_A 15 RCSIGFSVRQGSQTGFATAGHCGSTGTRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTG 87 (186)
T ss_dssp EEECCEEEEETTEEEEEECGGGCCTTCEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECCB
T ss_pred cEEeeEEEEcCCeeEEEEChhhCCCCCEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecCC
Confidence 44 6999964 3699999999998877764 567888887 899999999987431122 223555
Q ss_pred CCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCC
Q 014786 221 SADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSP 300 (418)
Q Consensus 221 ~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~ 300 (418)
+..+++|++|..+|++.+ .+.|+|+.+.+..... ...+.++++++..+.+|+|||||++ +|+++||+++....
T Consensus 88 ~~~~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~--~~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~ 160 (186)
T 2pfe_A 88 SQEAATGSSVCRSGATTG----WRCGTIQSKNQTVRYA--EGTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGD 160 (186)
T ss_dssp CCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET--TEEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEE
T ss_pred CCCCCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeC--CceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCC
Confidence 667899999999999876 6789998888764321 1124467788888889999999995 88999999987532
Q ss_pred CCCCCCccceeecccchhhh
Q 014786 301 SGASSGVGFSIPVDTVNGIV 320 (418)
Q Consensus 301 ~~~~~~~~~aIp~~~i~~~l 320 (418)
+ ...+.+|++|++.+.+.+
T Consensus 161 c-~~~~~~~~~pi~~~l~~~ 179 (186)
T 2pfe_A 161 C-RSGGITFFQPINPLLSYF 179 (186)
T ss_dssp T-TTEEEEEEEEHHHHHHHH
T ss_pred C-CCCCcEEEEEHHHHHHHC
Confidence 2 234578999977665443
No 31
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.68 E-value=6.1e-17 Score=146.05 Aligned_cols=155 Identities=23% Similarity=0.352 Sum_probs=104.5
Q ss_pred CeEEE-EEEEcC--CcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCC---CCccc-----ccC
Q 014786 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKD---KLRPI-----PIG 219 (418)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~---~~~~~-----~l~ 219 (418)
.+.|| ||+|+. ++|||||+||+.+...+.+-..++ ...+.+|+||||++.+.. .+.++ .+.
T Consensus 11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~~~--------~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 11 GSRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTRTG--------TSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp TEEEECCEEEEETTEEEEEECHHHHTTCSEETTEEEEE--------EECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCceeecceeC--------CcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 34677 999974 359999999998766543222211 233678999999987421 12221 222
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeC
Q 014786 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (418)
Q Consensus 220 ~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~ 299 (418)
....+.+|+.++++|++.+ .+.|.+..+...... ..+..+.+.++++..+++|+|||||++.+ +++||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~-~~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNY-GSSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEC-GGGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEEC-CCCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 3456889999999998754 456778776655421 11111345677888888999999999865 99999998764
Q ss_pred CCCCCCCccceeecccchhhh
Q 014786 300 PSGASSGVGFSIPVDTVNGIV 320 (418)
Q Consensus 300 ~~~~~~~~~~aIp~~~i~~~l 320 (418)
.+. ..+.++++|++.+++++
T Consensus 157 ~~~-~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 157 NCR-TGGTTFYQPVTEALSAY 176 (181)
T ss_dssp ETT-TEEEEEEEEHHHHHHHH
T ss_pred CCc-CCCceEEEEHHHHHHhc
Confidence 332 24578899887766554
No 32
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.68 E-value=1.8e-16 Score=140.44 Aligned_cols=116 Identities=19% Similarity=0.313 Sum_probs=92.4
Q ss_pred CCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEe---cCCCCCCcccccCCCCCCCC
Q 014786 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRI---DAPKDKLRPIPIGVSADLLV 226 (418)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv---~~~~~~~~~~~l~~~~~~~~ 226 (418)
+.+.||||+|+.+|++||++||+.+.....|+. +|.++. +.+++..|+|++++ +.+ ..+|+++++. +++
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~-~G~~~~---Vgf~~~~DlA~l~v~~~~~~-g~~P~l~las---p~v 84 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI-GDAMLT---LTFKKNGDFAEAVTTQSELP-GNWPQLHFAQ---PTT 84 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE-TTEEEE---EECEEETTEEEEEECTTTSC-SCCCBCCBCC---CCS
T ss_pred cCCccceEEECCCeEEEEeeeEEccCceEEEEE-CCEEEE---eecccCCcEEEEEeeccCCC-CCCcccccCC---Ccc
Confidence 468999999999999999999999999999999 998887 67779999999999 444 4577888843 688
Q ss_pred CCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeee
Q 014786 227 GQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 227 G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~ 297 (418)
|+.-+. .+.|.+.++.- ....++++ .||+||||++|.+ +||||+++.
T Consensus 85 G~a~~~----------~~tG~~~~l~g----------~~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~s 131 (198)
T 1mbm_A 85 GPASWC----------TATGDEEGLLS----------GEVCLAWT---TSGDSGSAVVQGD-AVVGVHTGS 131 (198)
T ss_dssp EEEEEE----------ETTEEEEEEEC----------SSCEECCC---CGGGTTCEEEETT-EEEEEEEEE
T ss_pred cceEEe----------eccccEEEEec----------CCceeEcC---CCCCCCCccccCC-eEEEEEecc
Confidence 883332 44566655431 13566666 7999999999988 999999983
No 33
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.55 E-value=6.4e-15 Score=132.57 Aligned_cols=117 Identities=24% Similarity=0.296 Sum_probs=81.0
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEE
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKV 230 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V 230 (418)
.+.|+||.++.+++||||+|||.+.+. +...++.+|.+ .+|+..|+|++++......+|.++++... ..|...
T Consensus 29 ~GsGt~F~i~g~~~VvTA~HVVg~~~~--vVt~~g~r~~~---~f~~~~D~All~i~~~~g~~P~lKlA~~~--~~G~a~ 101 (213)
T 3fan_A 29 MGSGGVFTIDGKIKCVTAAHVLTGNSA--RVSGVGFNQML---DFDVKGDFAIADCPNWQGVAPKAQFCEDG--WTGRAY 101 (213)
T ss_dssp EEEEEEEEETTEEEEEEEGGGSBTTEE--EEEETTEEEEE---ECEEETTEEEEECTTCCSCCCBCCBCCTT--CCEEEE
T ss_pred CCceEEEEECCcEEEEEeccEeCCCCE--EEecCCcEEEE---EecCCCcEEEEEccCcCCCCCcceeeeee--ccCceE
Confidence 578999999877899999999998888 44456766643 67899999999997544578888887322 223332
Q ss_pred EEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeee
Q 014786 231 YAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 231 ~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~ 297 (418)
+..-+ ....|.+.. ...+.++ ++|||||||+|.+|+||||+++.
T Consensus 102 ~~~~~------gv~~G~i~~--------------~~al~~T---~pGdSGsPVvn~dG~VIGVHt~s 145 (213)
T 3fan_A 102 WLTSS------GVEPGVIGN--------------GFAFCFT---ACGDSGSPVITEAGELVGVHTGS 145 (213)
T ss_dssp EEETT------EEEEEEEET--------------TEEEESS---CCCSTTCEEEETTSCEEEEEEC-
T ss_pred EEEcc------Ccccccccc--------------CCEEEec---CCCCCCCccCCCCCcEEEEEecc
Confidence 32221 122233320 0122222 68999999999999999999975
No 34
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.51 E-value=1.3e-12 Score=121.11 Aligned_cols=169 Identities=18% Similarity=0.241 Sum_probs=108.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCC--CeEEEEeCC------CcEEEEEEEEEcCC-----CCeEEEEecCCC---CCCcc
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD------QSAYDAKIVGFDQD-----KDVAVLRIDAPK---DKLRP 215 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d------g~~~~a~vv~~d~~-----~DlAlLkv~~~~---~~~~~ 215 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|++.. +..+..+-+..+++ +|||||+++.+. ....+
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~p 102 (224)
T 1pq7_A 24 PWCGGSLLNAN-TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGY 102 (224)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCC
T ss_pred eEEEEEEecCC-EEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccc
Confidence 47999999987 999999999853 457777642 34566666666664 599999998754 23567
Q ss_pred cccCC-CCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-----cccCCCCCCC
Q 014786 216 IPIGV-SADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINPGNSGG 281 (418)
Q Consensus 216 ~~l~~-~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~i~~G~SGG 281 (418)
+.|.. ...+..|+.+++.||..... .......+.-+....+. +........++... ...+.|+|||
T Consensus 103 icL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 182 (224)
T 1pq7_A 103 ARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGG 182 (224)
T ss_dssp CCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTC
T ss_pred eecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCc
Confidence 77753 23467899999999874321 12233333222221111 11011223445442 3578999999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhh
Q 014786 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQ 322 (418)
Q Consensus 282 Pl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~ 322 (418)
||+..+|.++||++++.. ++.....+....+...++++++
T Consensus 183 PL~~~~g~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 183 PIVDSSNTLIGAVSWGNG-CARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp EEECTTCCEEEEEEECSS-SSCTTCCEEEEETTTSHHHHHH
T ss_pred ceECcCCeEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHh
Confidence 999878999999998743 2222334556667777777765
No 35
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.46 E-value=3.6e-12 Score=119.11 Aligned_cols=172 Identities=17% Similarity=0.230 Sum_probs=106.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeC-------CCcEEEEEEEEEcC------------------CCCeEEEE
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-------DQSAYDAKIVGFDQ------------------DKDVAVLR 205 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~-------dg~~~~a~vv~~d~------------------~~DlAlLk 205 (418)
...|+|.+|+++ +|||+|||+.+...+.+-.. .++.+..+-+..++ .+|||||+
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 101 (237)
T 2zch_P 23 RAVCGGVLVHPQ-WVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLR 101 (237)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEE
T ss_pred CeEEEEEEecCC-EEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEE
Confidence 457999999987 99999999987554333211 13345555444443 56999999
Q ss_pred ecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc----
Q 014786 206 IDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD---- 271 (418)
Q Consensus 206 v~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~---- 271 (418)
++.+. ....++.|... ....|+.+++.||..... .......+.-+....+.. ........++...
T Consensus 102 L~~~~~~~~~v~pi~Lp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~ 180 (237)
T 2zch_P 102 LSEPAELTDAVKVMDLPTQ-EPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTG 180 (237)
T ss_dssp ESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECTTC
T ss_pred eCCCCccCCcEeeeECCCC-CCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCCCC
Confidence 98753 24567777543 467899999999875321 122222222222111110 0111122344432
Q ss_pred -cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 -AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 -~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+. ++.++||++++...++.....+....+...++++++.++
T Consensus 181 ~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 181 GKSTCSGDSGGPLVC-NGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp SCBCCTTCTTCEEES-SSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcccCCCccCeEEE-CCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 35789999999995 679999999875333333345666777778888877654
No 36
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.46 E-value=3.2e-12 Score=118.87 Aligned_cols=171 Identities=19% Similarity=0.189 Sum_probs=106.4
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+...+.|.+.. ...+..+-+..++ .+|||||+++.+. .
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~ 101 (226)
T 1azz_A 23 MYFCGGSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTA 101 (226)
T ss_dssp TEEEEEEEEETT-EEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCS
T ss_pred cEEEEEEEecCC-EEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCC
Confidence 457999999987 999999999988888888742 1233443334443 4699999998764 2
Q ss_pred CCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccCCCCCcccEEEEc----cccCCCCCCC
Q 014786 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQTD----AAINPGNSGG 281 (418)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~----~~i~~G~SGG 281 (418)
...++.|.... ...|+.+++.||..... .......+.-+....+....+.....++... ...|.|+|||
T Consensus 102 ~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGg 180 (226)
T 1azz_A 102 AIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGG 180 (226)
T ss_dssp SSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTC
T ss_pred CcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCc
Confidence 46677775443 47899999999874322 1122222221111111100011122344432 3578999999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 282 Pl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
||+ .+|.++||++++..........+....+...++++++.+
T Consensus 181 PL~-~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 181 PLN-YNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp EEE-ETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred ceE-ECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 999 578999999988632222233455666777777777654
No 37
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.46 E-value=6.7e-12 Score=116.47 Aligned_cols=171 Identities=20% Similarity=0.294 Sum_probs=105.0
Q ss_pred eEEEEEEEcCCcEEEecccccCCCC--eEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~--~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (418)
..|+|.+|+++ +|||+|||+.+.. .+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~ 102 (228)
T 2xw9_A 24 HLCGGVLVAEQ-WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLG 102 (228)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCB
T ss_pred eEEEEEEEeCC-EEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 47999999987 9999999997543 67777642 2345555555554 3599999998754
Q ss_pred CCCcccccCCC-CCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccCC---CCCcccEEEEc---cccCCCC
Q 014786 211 DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT---GRPIQDVIQTD---AAINPGN 278 (418)
Q Consensus 211 ~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~---~~~~~~~i~~~---~~i~~G~ 278 (418)
....++.|... ..+..|+.+++.||..... .......+.-+....+.... +.....++... ...+.|+
T Consensus 103 ~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 182 (228)
T 2xw9_A 103 PAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGD 182 (228)
T ss_dssp TTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTTC
T ss_pred CCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCCC
Confidence 23556666543 3467899999999864321 12222222222211111111 11122344432 4578899
Q ss_pred CCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 279 SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
|||||+. +|.++||+++....++.....+....+...++++++.+
T Consensus 183 sGgPL~~-~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 183 AGGPLVC-GGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp TTCEEEE-TTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred CcccEEE-CCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 9999996 67999999987533332234556677777777777654
No 38
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.46 E-value=8.2e-12 Score=115.32 Aligned_cols=163 Identities=19% Similarity=0.226 Sum_probs=100.9
Q ss_pred eEEEEEEEcCCcEEEecccccCCCC--eEEEEeCC---------CcEEEEEEEEEc------CCCCeEEEEecCCC---C
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFAD---------QSAYDAKIVGFD------QDKDVAVLRIDAPK---D 211 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~--~i~V~~~d---------g~~~~a~vv~~d------~~~DlAlLkv~~~~---~ 211 (418)
..|+|.+|+++ +|||+|||+.+.. .+.|.+.. ...+..+.+..+ ..+|||||+++.+. .
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~~ 105 (221)
T 1fuj_A 27 HFCGGTLIHPS-FVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSA 105 (221)
T ss_dssp CCEEEEEEETT-EEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCS
T ss_pred EEEEEEEecCC-EEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccCC
Confidence 46999999987 9999999998643 57777642 233444433332 34699999998764 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCCCCCCC-----ceeEeEEeeeeeeecccCCCCCcccEEEE-----ccccCCCCCC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNSG 280 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~SG 280 (418)
...++.|.... .+..|+.+++.||...... ......+.-+ .. ... ..++.. ....+.|+||
T Consensus 106 ~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~-----~C~--~~~~Ca~~~~~~~~~C~GDSG 177 (221)
T 1fuj_A 106 SVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TF-----FCR--PHNICTFVPRRKAGICFGDSG 177 (221)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CT-----TCC--TTEEEEECSSSSCBCCTTCTT
T ss_pred cceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-ee-----ecC--CceeeeccCCCCCCCCCCCCC
Confidence 45677775443 3568999999998643221 1222222111 10 000 113332 2457899999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
|||+. +|.++||+++....++.....+....+...++++++.+
T Consensus 178 gPL~~-~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 178 GPLIC-DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp CEEEE-TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CeeEE-CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 99996 78999999984311222223455666777777776643
No 39
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.46 E-value=3.7e-12 Score=119.00 Aligned_cols=169 Identities=18% Similarity=0.199 Sum_probs=103.5
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (418)
..|+|.+|+++ +|||+|||+. ..+.|.+.. ++.+..+-+..++ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1gvz_A 24 FQCGGVLVHPQ-WVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEE
T ss_pred eEEEeEEeeCC-EEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEE
Confidence 47999999987 9999999997 344555432 2344455455443 6799999
Q ss_pred EecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCC-CC-----ceeEeEEeeeeeeecccCC-CCCcccEEEEc---
Q 014786 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGL-DH-----TLTTGVISGLRREISSAAT-GRPIQDVIQTD--- 271 (418)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~-~~-----~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~~--- 271 (418)
+++.+. ....++.|... ....|+.++++||.... .. ......+.-+....+.... ......++...
T Consensus 101 ~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 179 (237)
T 1gvz_A 101 RLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRD 179 (237)
T ss_dssp EESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSS
T ss_pred EeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCC
Confidence 998764 24567777644 46789999999987532 11 1111222211111111100 01112344432
Q ss_pred --cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 --AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+. +|.++||++++...++.....+....+...++++++.++
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 180 DSGSICLGDSGGALIC-DGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp TTCEECGGGTTCEEEE-TTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred CCCccCCCCccCcEee-CCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 24688999999995 789999999875333222334556677777777777554
No 40
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.45 E-value=4.4e-12 Score=118.22 Aligned_cols=172 Identities=19% Similarity=0.226 Sum_probs=104.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC--------cEEEEEEEEEcC-------CCCeEEEEecCCC---CCC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKL 213 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg--------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~ 213 (418)
..|+|.+|+++ +|||+|||+.+...+.+-..+. +.+..+-+..++ .+|||||+++.+. ..+
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v 101 (231)
T 2aiq_A 23 SLCGGTLINQE-WVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHI 101 (231)
T ss_dssp EEEEEEECSSS-EEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTB
T ss_pred CeEEEEEEeCC-EEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcE
Confidence 47999999986 9999999998744333322211 223333333333 4599999998764 235
Q ss_pred cccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccCCCCCcccEEEEc-----cccCCCCCCCc
Q 014786 214 RPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQTD-----AAINPGNSGGP 282 (418)
Q Consensus 214 ~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SGGP 282 (418)
.++.|... ....|+.++++||..... .......+.-+...............++... ...+.|+||||
T Consensus 102 ~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 180 (231)
T 2aiq_A 102 APLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSGGP 180 (231)
T ss_dssp CCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCTTCE
T ss_pred EeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcCCCc
Confidence 67777544 356799999999874321 1222223322222111110111122344432 35789999999
Q ss_pred eeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 283 LLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 283 l~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
|+. +|+++||++++...++.....+....+...++++++.++.
T Consensus 181 L~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 181 LIC-NGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp EEE-TTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred EEE-CCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 996 6899999998743333333456667778888888876654
No 41
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.45 E-value=7.5e-12 Score=116.01 Aligned_cols=165 Identities=15% Similarity=0.204 Sum_probs=102.9
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC--CeEEEEeCCC----------cEEEEEEEEEc------CCCCeEEEEecCCC--
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ----------SAYDAKIVGFD------QDKDVAVLRIDAPK-- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg----------~~~~a~vv~~d------~~~DlAlLkv~~~~-- 210 (418)
...|+|.+|+++ +|||+|||+.+. ..+.|.+... ..+..+-+..+ ..+|||||+++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~ 101 (225)
T 1a7s_A 23 RHFCGGALIHAR-FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANL 101 (225)
T ss_dssp EEEEEEEEEETT-EEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCC
T ss_pred CcEEEEEEeeCC-EEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccC
Confidence 347999999987 999999999763 4577776431 23444433332 34699999998764
Q ss_pred -CCCcccccCCCC-CCCCCCEEEEEeCCCCCCC-----ceeEeEEeeeeeeecccCCCCCcccEEEE-----ccccCCCC
Q 014786 211 -DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGN 278 (418)
Q Consensus 211 -~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~ 278 (418)
....++.|.... .+..|+.+++.||...... ......+.-+..... . ..++.. ....|.|+
T Consensus 102 ~~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C-----~--~~~~Ca~~~~~~~~~C~GD 174 (225)
T 1a7s_A 102 TSSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQC-----R--PNNVCTGVLTRRGGICNGD 174 (225)
T ss_dssp BTTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGS-----C--TTEEEEECSSSSCBCCTTC
T ss_pred CCceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHh-----c--cCceEEeccCCCCCcccCC
Confidence 235666665433 3468999999998754221 122222221111111 0 133433 23578999
Q ss_pred CCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 279 SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
|||||+.. |.++||++++...++.. .+....+...++++++.++.
T Consensus 175 SGgPl~~~-g~l~Gi~S~g~~~C~~~--p~vyt~V~~~~~WI~~~~~~ 219 (225)
T 1a7s_A 175 GGTPLVCE-GLAHGVASFSLGPCGRG--PDFFTRVALFRDWIDGVLNN 219 (225)
T ss_dssp TTCEEEET-TEEEEEEEEECSSTTSS--CEEEEEGGGGHHHHHHHHHS
T ss_pred CcchheeC-CEEEEEEEEccCCcCCC--CcEEEEhHHhHHHHHHHhcC
Confidence 99999964 79999999874333322 56677778888888877654
No 42
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.45 E-value=7.7e-12 Score=116.00 Aligned_cols=167 Identities=19% Similarity=0.167 Sum_probs=103.3
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcCC-------CCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+.+ .+.|++.. .+.+.++-+..+++ +|||||+++.+. ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (224)
T 1cgh_A 27 SRCGGFLVRED-FVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRN 103 (224)
T ss_dssp CEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCc
Confidence 57999999987 99999999986 45555532 23455555555543 599999998764 24
Q ss_pred CcccccCCCC-CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCCC-CCcccEEEEc-----cccCCCCCCC
Q 014786 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAINPGNSGG 281 (418)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~~-----~~i~~G~SGG 281 (418)
..|+.|.... .+..|+.+++.||..... .......+.-+....+....+ .....++... ...|.|+|||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (224)
T 1cgh_A 104 VNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGG 183 (224)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTC
T ss_pred eEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCcc
Confidence 5677775433 357899999999874321 122233332222111110001 1112245442 3578899999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 282 Pl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||+. +|.++||++++. . .....+....+...++++++.++
T Consensus 184 PL~~-~~~l~Gi~S~g~-~--~~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 184 PLLC-NNVAHGIVSYGK-S--SGVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp EEEE-TTEEEEEEEECC-T--TCCSCEEEEEGGGGHHHHHHHHH
T ss_pred ceEE-ccEEEEEEEEEC-C--CCCCCeEEEEHHHhHHHHHHHhh
Confidence 9996 679999999875 1 12234555666777777766543
No 43
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.44 E-value=6.1e-12 Score=117.02 Aligned_cols=171 Identities=19% Similarity=0.237 Sum_probs=107.3
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC---------cEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.....+.|++.+. ..+..+.+..++ .+|||||+++.+. .
T Consensus 24 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (228)
T 1fxy_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (228)
T ss_dssp CEEEEEEECSSS-EEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CeeEEEEEeeCC-EEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCC
Confidence 357999999986 9999999998766677776421 234455454443 3599999998764 2
Q ss_pred CCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCC
Q 014786 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNS 279 (418)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~S 279 (418)
...|+.|... ....|+.+++.||..... .......+.-+....+.. ..+.....++... ...|.|+|
T Consensus 103 ~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 181 (228)
T 1fxy_A 103 NVAPASLPTA-PPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDS 181 (228)
T ss_dssp TBCCCCCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCT
T ss_pred ceeccCCCCC-CCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCcc
Confidence 4567777543 467899999999864321 122223332222211110 0111123445442 35789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||+. +++++||++++.. ++.....+...-+...++++++.++
T Consensus 182 GgPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 182 GGPVVC-NGQLQGVVSWGDG-CAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp TCEEEE-TTEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ccceEE-CCEEEEEEEECCC-CCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 999995 6799999998743 2222334556667777777776553
No 44
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.44 E-value=3.6e-12 Score=118.29 Aligned_cols=167 Identities=20% Similarity=0.259 Sum_probs=102.0
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC----------CCCeEEEEecCCC--
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ----------DKDVAVLRIDAPK-- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~----------~~DlAlLkv~~~~-- 210 (418)
..|+|.+|+++ +|||+|||+.. .+.|++.. ++.+..+-+..++ .+|||||+++.+.
T Consensus 24 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~ 100 (225)
T 1npm_A 24 LICGGVLVGDR-WVLTAAHCKKQ--KYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANL 100 (225)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCC
T ss_pred eEEEEEEECCC-EEEEhHHcCCC--CceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccC
Confidence 47999999987 99999999963 34555532 2344454444443 2499999998754
Q ss_pred -CCCcccccCCCCCCCCCCEEEEEeCCCCC------CCceeEeEEeeeeeeeccc-CCCCCcccEEEE----ccccCCCC
Q 014786 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGL------DHTLTTGVISGLRREISSA-ATGRPIQDVIQT----DAAINPGN 278 (418)
Q Consensus 211 -~~~~~~~l~~~~~~~~G~~V~~vG~p~g~------~~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~----~~~i~~G~ 278 (418)
....|+.|... .+..|+.++++||.... ........+.-+....+.. ..+.....++.. ....|.|+
T Consensus 101 ~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GD 179 (225)
T 1npm_A 101 GDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGD 179 (225)
T ss_dssp SSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTC
T ss_pred CCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCCC
Confidence 24677777644 46789999999987431 1122333332222211110 111112344444 24678999
Q ss_pred CCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhh
Q 014786 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (418)
Q Consensus 279 SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l 323 (418)
|||||+. +|+++||++++...++.....+...-+...++++++.
T Consensus 180 SGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (225)
T 1npm_A 180 SGGPLVC-DGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKT 223 (225)
T ss_dssp TTCEEEE-TTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHH
T ss_pred CCchheE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 9999995 6899999998743333223344555556666666553
No 45
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.44 E-value=6e-12 Score=117.58 Aligned_cols=169 Identities=19% Similarity=0.186 Sum_probs=104.3
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (418)
..|+|.+|+++ +|||+|||+.+ .+.|.+.. ++.+..+-+..++ .+|||||
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1ao5_A 24 HICGGVLLDRN-WVLTAAHCYVD--QYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECTTCCCS--SCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEE
T ss_pred eEEEEEEeeCC-EEEECHHHCCC--CCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEEE
Confidence 47999999987 99999999963 44555532 1223344333332 6799999
Q ss_pred EecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc---
Q 014786 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD--- 271 (418)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~--- 271 (418)
+++.+. ....|+.|... .+..|+.+++.||..... .......+.-+....+.. ........++...
T Consensus 101 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 179 (237)
T 1ao5_A 101 RLSKPADITDVVKPIALPTK-EPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMG 179 (237)
T ss_dssp EESSCCCCCSSSCCCCCCCS-CCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTT
T ss_pred EeCCccccCCceeCCCcCCC-CCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccCC
Confidence 998764 24567777643 467899999999864321 122222332222111110 0111123344442
Q ss_pred --cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 --AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+. +|.++||++++...++.....+....+...++++++.++
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 180 GGKDTCRDDSGGPLIC-DGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCcceEEE-CCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 35789999999996 789999999874333333334556677777788776554
No 46
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.44 E-value=1.7e-11 Score=114.68 Aligned_cols=171 Identities=16% Similarity=0.213 Sum_probs=105.1
Q ss_pred CeEEEEEEEcCCcEEEecccccCC---CCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (418)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 25 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~ 103 (240)
T 1mza_A 25 HHVCGGVLIDPQ-WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAK 103 (240)
T ss_dssp EEEEEEEEEETT-EEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCC
T ss_pred ceEEEEEEecCC-EEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCcc
Confidence 347999999987 99999999864 4567777642 1344555444443 4699999998754
Q ss_pred --CCCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecc---cCCC--CCcccEEEEc-----c
Q 014786 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS---AATG--RPIQDVIQTD-----A 272 (418)
Q Consensus 211 --~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~---~~~~--~~~~~~i~~~-----~ 272 (418)
....++.|.....+..|+.+++.||..... .......+.-+....+. ...+ .....++... .
T Consensus 104 ~~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~ 183 (240)
T 1mza_A 104 LNKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQK 183 (240)
T ss_dssp CBTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCC
T ss_pred cCCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCC
Confidence 245677776534577899999999864321 12333333322222121 1111 1123444442 3
Q ss_pred ccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeeccc-chhhhhhhh
Q 014786 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT-VNGIVDQLV 324 (418)
Q Consensus 273 ~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~-i~~~l~~l~ 324 (418)
..|.|+|||||+. +|.++||++++.. ++.....+....+.. .++++++.+
T Consensus 184 ~~C~GDSGGPL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~v~~~y~~WI~~~~ 234 (240)
T 1mza_A 184 DSCKGDAGGPLIC-KGVFHAIVSGGHE-CGVATKPGIYTLLTKKYQTWIKSNL 234 (240)
T ss_dssp CCCTTCTTCEEEE-TTEEEEEECSSCC-SSCTTCCEEEEECCHHHHHHHHHHT
T ss_pred ccCCCCCCCeeEE-CCEEEEEEEECCC-CCCCCCCcEEEeChHHHHHHHHHhc
Confidence 5789999999996 6899999998753 222223344445555 666666654
No 47
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.44 E-value=8.3e-12 Score=115.22 Aligned_cols=164 Identities=15% Similarity=0.220 Sum_probs=101.5
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC--CeEEEEeCCC---------cEEEEEEEEEc------CCCCeEEEEecCCC---
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ---------SAYDAKIVGFD------QDKDVAVLRIDAPK--- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg---------~~~~a~vv~~d------~~~DlAlLkv~~~~--- 210 (418)
...|+|.+|+++ +|||+|||+.+. ..+.|.+... +.+..+-+..+ ..+|||||+++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 101 (218)
T 2z7f_E 23 GHFCGATLIAPN-FVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATIN 101 (218)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCS
T ss_pred CcEEEEEEccCC-EEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCC
Confidence 347999999987 999999999864 3467776431 33444433332 34699999998754
Q ss_pred CCCcccccCCCC-CCCCCCEEEEEeCCCCCCC-----ceeEeEEeeeeeeecccCCCCCcccEEEE-----ccccCCCCC
Q 014786 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (418)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----~~~i~~G~S 279 (418)
....|+.|.... .+..|+.++++||...... ......+.-+ .... .. .++.. ....+.|+|
T Consensus 102 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C-----~~--~~~Ca~~~~~~~~~C~GDS 173 (218)
T 2z7f_E 102 ANVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLC-----RR--SNVCTLVRGRQAGVCFGDS 173 (218)
T ss_dssp SSCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTC-----CT--TSEEEECTTSCCBCCTTCT
T ss_pred CceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHc-----Cc--ceeeeccCCCCCeeCCCcC
Confidence 245677775443 3568999999998743221 1222222211 1100 11 12322 245789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
||||+. +|.++||+++....++.....+....+...++++++.+
T Consensus 174 GgPl~~-~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 174 GSPLVC-NGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp TCEEEE-TTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCceEE-ccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 999995 67999999984222332223455666777777776643
No 48
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.44 E-value=1e-11 Score=115.22 Aligned_cols=169 Identities=20% Similarity=0.259 Sum_probs=105.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+... +.|.+.. ++.+..+-+..++ .+|||||+++.+. ..
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~ 100 (223)
T 1lo6_A 24 LLCGGVLIHPL-WVLTAAHCKKPN--LQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSEL 100 (223)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTT--CEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred EEEEeEEecCC-EEEECccCCCCC--eEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCc
Confidence 57999999987 999999999743 4454421 2344554444443 4699999998764 24
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCCCCc
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNSGGP 282 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~SGGP 282 (418)
..|+.|... ....|+.++++||..... .......+.-+....+.. ..+.....++... ...+.|+||||
T Consensus 101 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgP 179 (223)
T 1lo6_A 101 IQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGP 179 (223)
T ss_dssp BCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCE
T ss_pred eeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCc
Confidence 567777543 357899999999864321 122222332222211111 1111223445442 35789999999
Q ss_pred eeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 283 LLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 283 l~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|+. +|+++||++++...++.....+...-+...++++++.++
T Consensus 180 L~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 1lo6_A 180 LVC-GDHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTIQ 221 (223)
T ss_dssp EEE-TTEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHHC
T ss_pred EEe-CCEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 996 679999999874333333345566777777788777553
No 49
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.43 E-value=1.9e-11 Score=114.61 Aligned_cols=173 Identities=20% Similarity=0.203 Sum_probs=107.3
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------C--CCeEEEEecCCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------D--KDVAVLRIDAPK--- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~--~DlAlLkv~~~~--- 210 (418)
..|+|.+|+++ +|||+|||+.....+.|.+.. +..+..+-+..++ . +|||||+++.+.
T Consensus 28 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1bru_P 28 HTCGGTLVDQS-WVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLT 106 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCC
T ss_pred eEEEeEEeeCC-EEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 47999999987 999999999865677787742 2345555444543 2 799999998764
Q ss_pred CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccC--CC-CCcccEEEEc----cccCCC
Q 014786 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD----AAINPG 277 (418)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~~----~~i~~G 277 (418)
..+.++.|.... .+..|+.+++.||..... .......+.-+....+... .+ .....++... ...|.|
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (241)
T 1bru_P 107 DKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNG 186 (241)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTT
T ss_pred CccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCC
Confidence 245666665433 356799999999864321 1223333322222211110 01 1122445443 357899
Q ss_pred CCCCceeCC--Cc--eEEEEEeeeeC-CCCCCCCccceeecccchhhhhhhhh
Q 014786 278 NSGGPLLDS--SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 278 ~SGGPl~n~--~G--~VVGI~s~~~~-~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
+|||||+.. +| .++||++++.. .++.....+...-+...++++++.++
T Consensus 187 DSGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 187 DSGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999999953 56 79999998753 22222334556667777777776554
No 50
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.43 E-value=7.5e-12 Score=116.79 Aligned_cols=169 Identities=18% Similarity=0.218 Sum_probs=105.5
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (418)
..|+|.+|+++ +|||+|||+. ..+.|.+.. +..+..+-+..++ .+|||||
T Consensus 22 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 98 (235)
T 1ton_A 22 YLCGGVLIDPS-WVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLL 98 (235)
T ss_dssp SEEEEEEEETT-EEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEE
T ss_pred CeEEEEEecCC-EEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEE
Confidence 37999999986 9999999996 344555532 2233444343332 3599999
Q ss_pred EecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccC-CCCCcccEEEEc---
Q 014786 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQTD--- 271 (418)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~~--- 271 (418)
+++.+. ..+.++.|... .+..|+.+++.||..... .......+.-+....+... .......++...
T Consensus 99 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 177 (235)
T 1ton_A 99 HLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEME 177 (235)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTT
T ss_pred EcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCC
Confidence 998753 24667777644 467899999999875321 1223333332222211111 111123445442
Q ss_pred --cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 --AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+. +|.++||++++...++.....+...-+...++++++.++
T Consensus 178 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 178 GGKDTCAGDSGGPLIC-DGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCCCccccEE-CCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 35789999999996 789999999874433333345666777778888877654
No 51
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.43 E-value=9.8e-12 Score=115.14 Aligned_cols=168 Identities=19% Similarity=0.230 Sum_probs=106.0
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. ++.+..+-+..++ .+|||||+++.+. ..
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~ 102 (222)
T 1eq9_A 24 HRCGASILDNN-NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDL 102 (222)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCc
Confidence 47999999986 999999999763 467777642 3455665555554 3699999998764 24
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc-cCCCCCcccEEEEc----cccCCCCCCCc
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS-AATGRPIQDVIQTD----AAINPGNSGGP 282 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~-~~~~~~~~~~i~~~----~~i~~G~SGGP 282 (418)
..|+.|........|+.+++.||..... .......+.-+...... ...+ ....++... ...+.|+||||
T Consensus 103 v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C~GDSGgP 181 (222)
T 1eq9_A 103 VQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGACHGDSGGP 181 (222)
T ss_dssp BCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCCTTCTTCE
T ss_pred eEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeeeeCCccce
Confidence 5677776544446799999999874321 12222222222211111 0011 122344432 35789999999
Q ss_pred eeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 283 LLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 283 l~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
|+. +|.++||++++.. ++. ...+....+...++++++.+
T Consensus 182 L~~-~~~l~GI~S~g~~-C~~-~~p~vyt~V~~~~~WI~~~~ 220 (222)
T 1eq9_A 182 LVA-NGAQIGIVSFGSP-CAL-GEPDVYTRVSSFVSWINANL 220 (222)
T ss_dssp EEE-TTEEEEEEEECST-TTS-SSCEEEEEGGGGHHHHHHTS
T ss_pred EEE-CCEEEEEEEECCC-cCC-CCCCEEEEHHHHHHHHHHHh
Confidence 996 6899999998743 222 33455666777777776644
No 52
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.43 E-value=1.3e-11 Score=114.87 Aligned_cols=174 Identities=18% Similarity=0.165 Sum_probs=106.2
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC------Cc--EEEEEEEEEc-------CCCCeEEEEecCCC---CC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QS--AYDAKIVGFD-------QDKDVAVLRIDAPK---DK 212 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~--~~~a~vv~~d-------~~~DlAlLkv~~~~---~~ 212 (418)
...|+|.+|+++ ||||+|||+.....+.+-..+ .. .+..+.+..+ ..+|||||+++.+. ..
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 103 (238)
T 4e7n_A 25 TLFCGGTLINQE-WVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKH 103 (238)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTT
T ss_pred CEEEEEEEecCC-EEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCc
Confidence 457999999986 999999999765444433221 11 1222233222 24699999998754 23
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccCC----CCCcccEEEE-----ccccCCC
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT----GRPIQDVIQT-----DAAINPG 277 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~~----~~~~~~~i~~-----~~~i~~G 277 (418)
+.++.|... ....|+.+++.||..... .......+.-+......... ......++.. ....|.|
T Consensus 104 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~G 182 (238)
T 4e7n_A 104 IAPFSLPSS-PPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKG 182 (238)
T ss_dssp BCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTT
T ss_pred eeeeeCCCC-CCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCC
Confidence 566777543 466799999999874321 12222333322222221110 0112234443 2457889
Q ss_pred CCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcc
Q 014786 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (418)
Q Consensus 278 ~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g 327 (418)
+|||||+. +++++||++++...++.....+....+...++++++.++..
T Consensus 183 DSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 231 (238)
T 4e7n_A 183 DSGGPLIC-NGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAGN 231 (238)
T ss_dssp CTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTTC
T ss_pred CCCcceEE-CCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhcC
Confidence 99999995 67899999987654443344566777788888888876643
No 53
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.43 E-value=2.7e-11 Score=112.16 Aligned_cols=168 Identities=17% Similarity=0.131 Sum_probs=102.4
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC---------cEEEEEEEEEcCC-------CCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQD-------KDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~~-------~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.. .+.|.+... +.+..+-+..+++ +|||||+++.+. .
T Consensus 27 ~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~ 103 (226)
T 4ag1_A 27 SKFCGGFLIRRN-FVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTL 103 (226)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCS
T ss_pred ccEEEEEEEeCC-EEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCC
Confidence 357999999987 99999999954 556665321 2345555555554 599999998753 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccCCCCCcccEEEEc-----cccCCCCCC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATGRPIQDVIQTD-----AAINPGNSG 280 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~-----~~i~~G~SG 280 (418)
...++.+.... .+..|+.+++.||..... .......+.-+....+..........++... ...+.|+||
T Consensus 104 ~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 183 (226)
T 4ag1_A 104 AVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFDHNLQLCVGNPRKTKSAFKGDSG 183 (226)
T ss_dssp SSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred ceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcCccceEeeccCCCCCcCccCCCC
Confidence 34566664332 356899999999864321 1223333332222222211111123344432 357889999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|||+. ++.++||++++..... ..+....+...++++++.++
T Consensus 184 gPl~~-~~~l~Gi~S~g~~c~~---~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 184 GPLLC-AGVAQGIVSYGRSDAK---PPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CEEEE-TTEEEEEEEECBTTCC---SCEEEEEHHHHHHHHHHHHH
T ss_pred CceEE-cCEEEEEEEECCCCCC---CCCEEEEhHHHHHHHHHHHh
Confidence 99995 7799999998754221 14555666667777776554
No 54
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.43 E-value=1.4e-11 Score=114.51 Aligned_cols=174 Identities=17% Similarity=0.172 Sum_probs=105.5
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC-------CcE-EEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSA-YDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d-------g~~-~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
...|+|.+|+++ +|||+|||+.....+.+-..+ ... ...+.+..++ .+|||||+++.+. ..
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~ 101 (234)
T 3s69_A 23 GFFCSGTLINEE-WVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEH 101 (234)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTT
T ss_pred CeEEeEEEeeCC-EEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCc
Confidence 457999999987 999999999755444332221 111 2223333232 4699999998753 34
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecc--cCCCCCcccEEEE-----ccccCCCCC
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINPGNS 279 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~~G~S 279 (418)
..++.|... ....|+.+++.||..... .......+.-+...... +........++.. ....+.|+|
T Consensus 102 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 180 (234)
T 3s69_A 102 IVPLSLPSS-PPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDS 180 (234)
T ss_dssp BCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCT
T ss_pred ceeeecCCC-CCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCC
Confidence 566777543 456799999999874321 12222222222221111 1101112234433 345788999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcc
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g 327 (418)
||||+. +++++||++++...++.....+....+...++++++.++..
T Consensus 181 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~~ 227 (234)
T 3s69_A 181 GGPLIC-NGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAGN 227 (234)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred ccceEE-cCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcCC
Confidence 999995 67899999987654443334566777888888888876643
No 55
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.42 E-value=1e-11 Score=115.11 Aligned_cols=168 Identities=18% Similarity=0.208 Sum_probs=104.9
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+. ..+.|++.. ++.+.++-+..++ .+|||||+++.+. ..
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 99 (223)
T 3mfj_A 23 HFCGGSLINSQ-WVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSR 99 (223)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEecCC-EEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCc
Confidence 47999999987 9999999995 445555532 2344555444554 4699999998754 24
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCCC
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNSG 280 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~SG 280 (418)
+.++.|... ....|+.+++.||..... .......+.-+....... ........++... ...+.|+||
T Consensus 100 v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 178 (223)
T 3mfj_A 100 VASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSG 178 (223)
T ss_dssp BCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTT
T ss_pred EeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcc
Confidence 667777644 357899999999874421 122222332222211110 1111223455442 357899999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|||+. +|+++||++++.. ++.....+....+...++++++.++
T Consensus 179 gPL~~-~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 179 GPVVC-SGKLQGIVSWGSG-CAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp CEEEE-TTEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred cceEE-CCEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 99996 7899999998743 2222334556677777777776543
No 56
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.42 E-value=1.5e-11 Score=114.35 Aligned_cols=170 Identities=16% Similarity=0.186 Sum_probs=105.1
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC----------CcEEEEEEEEEcC-------CCCeEEEEecCCC---
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (418)
...|+|.+|+++ +|||+|||+.+. +.|++.. ++.+..+-+..++ .+|||||+++.+.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~ 100 (227)
T 2psx_A 24 QLYCGAVLVHPQ-WLLTAAHCRKKV--FRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPT 100 (227)
T ss_dssp EEEEEEEEEETT-EEEECGGGCCSS--CEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCC
T ss_pred CceEEEEEEcCC-EEEEhHHcCCCC--cEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCC
Confidence 347999999986 999999999753 3444421 2234444444443 4599999998753
Q ss_pred CCCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc----cccCCCCC
Q 014786 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD----AAINPGNS 279 (418)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~----~~i~~G~S 279 (418)
..+.++.|.. ..+..|+.++++||..... .......+.-+....... ........++... ...|.|+|
T Consensus 101 ~~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDS 179 (227)
T 2psx_A 101 KDVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDS 179 (227)
T ss_dssp SSSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCT
T ss_pred CceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCC
Confidence 2466777764 4577899999999874322 122222232222111110 0111123344442 35789999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||+. ++.++||++++...++.....+....+...++++++.++
T Consensus 180 GgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 180 GGPVVC-NGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred Ccceee-CCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999995 579999999874333323345666777778888877654
No 57
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.42 E-value=1.1e-11 Score=115.57 Aligned_cols=170 Identities=18% Similarity=0.209 Sum_probs=105.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC---------CCCeEEEEecCCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (418)
..|+|.+|+++ +|||+|||+.+...+.|.+.. .+.+.++-+..++ .+|||||+++.+.
T Consensus 28 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~ 106 (236)
T 1elt_A 28 HTCGGSLIRQG-WVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLN 106 (236)
T ss_dssp EEEEEEEEETT-EEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCS
T ss_pred eEEEEEEEeCC-EEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccC
Confidence 47999999987 999999999887788888743 2334555454443 5699999998753
Q ss_pred CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccC--CC-CCcccEEEEc---cccCCCC
Q 014786 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINPGN 278 (418)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~~---~~i~~G~ 278 (418)
....++.|.... .+..|+.++++||..... .......+.-+....+... .+ .....++... ...|.|+
T Consensus 107 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 186 (236)
T 1elt_A 107 SAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGD 186 (236)
T ss_dssp SSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTC
T ss_pred CcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCC
Confidence 235666675443 356799999999875321 1222222222221111110 01 1122344432 4568999
Q ss_pred CCCceeCC-Cc--eEEEEEeeeeC-CCCCCCCccceeecccchhhhhh
Q 014786 279 SGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQ 322 (418)
Q Consensus 279 SGGPl~n~-~G--~VVGI~s~~~~-~~~~~~~~~~aIp~~~i~~~l~~ 322 (418)
|||||+.. +| .++||+++... .++.....+....+...++++++
T Consensus 187 SGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 187 SGGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp TTCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred CCCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 99999964 56 79999998642 33322334555666666666654
No 58
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.42 E-value=1.5e-11 Score=114.28 Aligned_cols=167 Identities=17% Similarity=0.151 Sum_probs=103.0
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+..++ .+|||||+++.+. ..
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1iau_A 27 KRCGGFLIRDD-FVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRA 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEEcCC-EEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCc
Confidence 47999999987 99999999975 45565532 2345555555554 3599999998754 23
Q ss_pred CcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-----cccCCCCC
Q 014786 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINPGNS 279 (418)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~i~~G~S 279 (418)
..|+.|.... .+..|+.+++.||..... .......+.-+....+. +........++... ...+.|+|
T Consensus 104 v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 183 (227)
T 1iau_A 104 VQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred eecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCC
Confidence 5667675433 357899999999874321 12222233222211111 10001111244442 35788999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||+. +|.++||++++ .+.....+....+....+++++.++
T Consensus 184 GgPL~~-~~~l~Gi~S~g---c~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 184 GGPLVC-NKVAQGIVSYG---RNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp TSEEEE-TTEEEEEEEEE---CTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred CchheE-eeEEEEEEeEe---cCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 999996 67999999987 2222234556677777777776553
No 59
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.42 E-value=1.8e-11 Score=113.85 Aligned_cols=172 Identities=17% Similarity=0.187 Sum_probs=105.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC--------CcEE--EEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD--------QSAY--DAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d--------g~~~--~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
..|+|.+|+++ ||||+|||+... +.|.+.. .... ....+..++ .+|||||+++.+. .
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~ 102 (234)
T 3s9c_A 26 IHCAGALINRE-WVLTAAHCDRRN--IRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYST 102 (234)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTT--EEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBT
T ss_pred EEEeeEEeeCC-EEEEchhhcCCC--ceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCC
Confidence 46999999987 999999999754 4444421 1111 222222232 3599999998754 3
Q ss_pred CCcccccCCCCCCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCC--CCCcccEEEE-----ccccCCCCCC
Q 014786 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT--GRPIQDVIQT-----DAAINPGNSG 280 (418)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~--~~~~~~~i~~-----~~~i~~G~SG 280 (418)
...++.|... ....|+.+++.||..... .......+.-+......... ......++.. ....|.|+||
T Consensus 103 ~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 181 (234)
T 3s9c_A 103 HIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSG 181 (234)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTT
T ss_pred cccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCC
Confidence 4667777543 456699999999864321 12222233222222221111 1112234443 2457889999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhccc
Q 014786 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFGK 328 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g~ 328 (418)
|||+. +++++||++++...++.....+....+...++++++.++..+
T Consensus 182 gPl~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~~ 228 (234)
T 3s9c_A 182 GPLIC-NGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGNR 228 (234)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTCS
T ss_pred CeEEE-eCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCCC
Confidence 99995 678999999876544433345667778888888888776543
No 60
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.42 E-value=7.5e-12 Score=116.16 Aligned_cols=172 Identities=17% Similarity=0.194 Sum_probs=107.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCC--CCeEEEEeCC------CcEEEEEEEEEc------CCCCeEEEEecCCCC----C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFAD------QSAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~d------g~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (418)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. +..+..+-+..+ ..+|||||+++.+.. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~ 101 (235)
T 3h7t_A 23 KPFCGGSILTAN-FVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKT 101 (235)
T ss_dssp SCCEEEEESSSS-EEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred CceEeEEEeeCC-EEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcc
Confidence 346999999987 99999999964 3467777643 233444433332 346999999987642 4
Q ss_pred CcccccCCCC-CCCCCCEEEEEeCCCCC------CCceeEeEEeeeeeeecccC-CC-----CCcccEEEE-----cccc
Q 014786 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGL------DHTLTTGVISGLRREISSAA-TG-----RPIQDVIQT-----DAAI 274 (418)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~------~~~~~~G~Vs~~~~~~~~~~-~~-----~~~~~~i~~-----~~~i 274 (418)
..++.|.... .+..|+.+++.||.... ........+.-+....+... .. .....++.. ....
T Consensus 102 v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 181 (235)
T 3h7t_A 102 TKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYI 181 (235)
T ss_dssp CCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBC
T ss_pred ccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcc
Confidence 5667775432 26789999999986432 11233333322222111100 00 012344444 3457
Q ss_pred CCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 275 NPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 275 ~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
+.|+|||||+. +|+++||++++.. ++. ...+....+....+++++.++.
T Consensus 182 C~GDsGgPl~~-~~~l~Gi~S~g~~-C~~-~~p~vyt~v~~~~~WI~~~i~~ 230 (235)
T 3h7t_A 182 GYGDAGDPAVQ-NGTLVGVASYISS-MPS-EFPSVFLRVGYYVLDIKDIISG 230 (235)
T ss_dssp CTTCTTCEEEE-TTEEEEEECCCTT-CCT-TSCEEEEEGGGGHHHHHHHHTT
T ss_pred ccCCCCCceee-CCeEEEEEEecCC-CCC-CCCceEEEHHHHHHHHHHHHhC
Confidence 88999999996 7899999998744 222 3455667777888888776653
No 61
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.41 E-value=9.2e-12 Score=115.48 Aligned_cols=169 Identities=18% Similarity=0.220 Sum_probs=104.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC----------CcEEEEEEEEEcC-------CCCeEEEEecCCC---
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (418)
...|+|.+|+++ +|||+|||+.+. +.|.+.. .+.+.++.+..++ .+|||||+++.+.
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~ 99 (223)
T 2bdg_A 23 ELFCSGVLVHPQ-WVLSAAHCFQNS--YTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSES 99 (223)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSS--EEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEhHHhCCCC--eEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCC
Confidence 457999999987 999999999753 4444421 2335555444554 4599999998753
Q ss_pred CCCcccccCCCCCCCCCCEEEEEeCCCCCCC----ceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCCC
Q 014786 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNSG 280 (418)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~----~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~SG 280 (418)
....++.|... .+..|+.+++.||...... ......+.-+....+.. ........++... ...+.|+||
T Consensus 100 ~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 178 (223)
T 2bdg_A 100 DTIRSISIASQ-CPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 178 (223)
T ss_dssp SSCCCCCBCSS-CCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTT
T ss_pred CceecccCCCC-CCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCC
Confidence 24567777543 4678999999998754321 22222232222111110 0111123445442 357899999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
|||+. +|.++||++++...++.....+...-+...++++++.+
T Consensus 179 gPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 179 GPLIC-NGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp CEEEE-TTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred chheE-ccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 99995 67999999987533333334455666677777776654
No 62
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.41 E-value=1.1e-11 Score=116.13 Aligned_cols=173 Identities=16% Similarity=0.204 Sum_probs=107.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC---------CCCeEEEEecCCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (418)
..|+|.+|+++ +|||+|||+.+...+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 28 ~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (240)
T 1gvk_B 28 HTCGGTLIRQN-WVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLN 106 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCB
T ss_pred ceEEEEEeeCC-EEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccC
Confidence 47999999987 999999999887778887743 2334555444443 5699999998754
Q ss_pred CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccC--CC-CCcccEEEEc----cccCCC
Q 014786 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD----AAINPG 277 (418)
Q Consensus 211 ~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~~----~~i~~G 277 (418)
....++.|.... .+..|+.+++.||..... .......+.-+....+... .+ .....++... ...|.|
T Consensus 107 ~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (240)
T 1gvk_B 107 SYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQG 186 (240)
T ss_dssp TTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTT
T ss_pred CCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCC
Confidence 235566665433 356799999999864321 1222222221221111110 01 1122345443 356899
Q ss_pred CCCCceeCC-Cc--eEEEEEeeeeC-CCCCCCCccceeecccchhhhhhhhh
Q 014786 278 NSGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 278 ~SGGPl~n~-~G--~VVGI~s~~~~-~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
+|||||+.. +| .++||+++... .++.....+...-+....+++++.++
T Consensus 187 DSGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 187 DSGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 999999853 56 89999998742 23222334556667777777776553
No 63
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.41 E-value=7.7e-12 Score=116.08 Aligned_cols=168 Identities=14% Similarity=0.157 Sum_probs=104.4
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCC-------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CCCcc
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD-------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLRP 215 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d-------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~~ 215 (418)
.|+|.+|+++ +|||+|||+. ..+.|++.. ++.+..+-+..++ .+|||||+++.+. ....+
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~p 101 (224)
T 2qxi_A 25 HCGGVLVNER-WVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKK 101 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCC
T ss_pred EEEEEEecCC-EEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceee
Confidence 7999999987 9999999995 456676642 2334444444444 3699999998764 24667
Q ss_pred cccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCCCCce
Q 014786 216 IPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNSGGPL 283 (418)
Q Consensus 216 ~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~SGGPl 283 (418)
+.|... ....|+.++++||..... .......+.-+....+.. ........++... ...+.|+|||||
T Consensus 102 icL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL 180 (224)
T 2qxi_A 102 VRLPSR-CEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPL 180 (224)
T ss_dssp CCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEE
T ss_pred EECCCC-CCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccE
Confidence 777544 356899999999875421 122222222221111110 0001112344432 357899999999
Q ss_pred eCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 284 LDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 284 ~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
+. +|+++||++++...++.....+...-+...++++++.++
T Consensus 181 ~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 181 VC-RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp EE-TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred EE-CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 96 789999999873333322334556777777788777554
No 64
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.41 E-value=1.3e-11 Score=114.30 Aligned_cols=168 Identities=17% Similarity=0.225 Sum_probs=104.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+.+ .+.|++.. ++.+..+-+..++ .+|||||+++.+. ..
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 99 (222)
T 1hj8_A 23 HFCGGSLVNEN-WVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTY 99 (222)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSS
T ss_pred cEEEeEEecCC-EEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCc
Confidence 47999999987 99999999974 34455422 2345555555554 4699999998764 24
Q ss_pred CcccccCCCCCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCCCC
Q 014786 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNSGG 281 (418)
Q Consensus 213 ~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~SGG 281 (418)
..|+.|... .+..|+.+++.||..... .......+.-+....... ..+.....++... ...+.|+|||
T Consensus 100 v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 178 (222)
T 1hj8_A 100 VQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGG 178 (222)
T ss_dssp CCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTC
T ss_pred eeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCccc
Confidence 567777543 467899999999875422 122223332222111110 0111123445442 3578999999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 282 Pl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||+. +|+++||++++.. ++.....+...-+...++++++.++
T Consensus 179 PL~~-~~~l~Gi~S~g~~-C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 179 PVVC-NGELQGVVSWGYG-CAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp EEEE-TTEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ceEE-CCEEEEEEeecCC-CCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 9996 6899999998743 2222344566677777777776543
No 65
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.40 E-value=1.7e-11 Score=114.50 Aligned_cols=169 Identities=17% Similarity=0.213 Sum_probs=103.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (418)
..|+|.+|+++ +|||+|||+.+ .+.|.+.. .+.+..+-+..++ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (238)
T 1spj_A 24 FQCGGILVHRQ-WVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLL 100 (238)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEE
T ss_pred eeEEEEEecCC-EEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEE
Confidence 47999999987 99999999975 34555432 2234444444332 3599999
Q ss_pred EecCCCC----CCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc-CCCCCcccEEEEc--
Q 014786 205 RIDAPKD----KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-- 271 (418)
Q Consensus 205 kv~~~~~----~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-- 271 (418)
+++.+.. ...++.|... ....|+.++++||..... .......+.-+....+.. ........++...
T Consensus 101 ~L~~~~~~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 179 (238)
T 1spj_A 101 RLTEPADTITDAVKVVELPTE-EPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHL 179 (238)
T ss_dssp EESSCCCCSSTTCCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECT
T ss_pred EECccccccCCceeeccCCCC-CCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeCC
Confidence 9987542 3566777543 456799999999864321 122222332222211110 0111123344432
Q ss_pred ---cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 ---AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+. ++.++||++++...++.....+...-+...++++++.++
T Consensus 180 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 235 (238)
T 1spj_A 180 EGGKDTCVGDSGGPLMC-DGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA 235 (238)
T ss_dssp TCSSBCCTTCTTCEEEE-TTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCCCCCCCCcEEE-cCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 35789999999995 689999999874434333344566677777788777654
No 66
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.40 E-value=6.3e-11 Score=110.87 Aligned_cols=174 Identities=13% Similarity=0.154 Sum_probs=108.0
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC--CeEEEEeCC-----------CcEEEEEEEEEcC-CCCeEEEEecCCC---CCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD-----------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKL 213 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d-----------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~ 213 (418)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+.+++ .+|||||+++.+. ..+
T Consensus 22 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v 100 (240)
T 1si5_H 22 KHICGGSLIKES-WVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFV 100 (240)
T ss_dssp SEEEEEEEEETT-EEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSC
T ss_pred CeEEEEEEeeCC-EEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCce
Confidence 457999999987 999999999764 467777642 1234444444554 6899999998753 245
Q ss_pred cccccCCC-CCCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCC-CC--CcccEEEE-----ccccCCCCCC
Q 014786 214 RPIPIGVS-ADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT-GR--PIQDVIQT-----DAAINPGNSG 280 (418)
Q Consensus 214 ~~~~l~~~-~~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~-~~--~~~~~i~~-----~~~i~~G~SG 280 (418)
.++.|... ..+..|+.++++||..... .......+.-+....+.... +. ....++.. ....|.|+||
T Consensus 101 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 180 (240)
T 1si5_H 101 STIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYG 180 (240)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTT
T ss_pred eccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCC
Confidence 66767543 3466899999999864322 12333333222222111110 00 11234443 2457889999
Q ss_pred CceeCCCc---eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 281 GPLLDSSG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 281 GPl~n~~G---~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
|||+..++ .++||++++.. ++.....+....+...++++++.++.
T Consensus 181 gPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~~ 228 (240)
T 1si5_H 181 GPLVCEQHKMRMVLGVIVPGRG-CAIPNRPGIFVRVAYYAKWIHKIILT 228 (240)
T ss_dssp CEEEEECSSSEEEEEEECSCSC-SSCTTCCEEEEEGGGGHHHHHHHHSS
T ss_pred CcEEEEECCcEEEEEEEEECCC-CCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence 99996433 79999998743 22223456667777888888876654
No 67
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.40 E-value=3.4e-11 Score=112.94 Aligned_cols=174 Identities=16% Similarity=0.186 Sum_probs=107.2
Q ss_pred eEEEEEEEcCCcEEEecccccCCCC-eEEEEeCC------CcEEEEEEEEEc--------CCCCeEEEEecCCC---CCC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGAS-DIRVTFAD------QSAYDAKIVGFD--------QDKDVAVLRIDAPK---DKL 213 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~-~i~V~~~d------g~~~~a~vv~~d--------~~~DlAlLkv~~~~---~~~ 213 (418)
..|+|.+|+++ +|||+|||+.+.. .+.|.+.. +..+..+-+..+ ..+|||||+++.+. ...
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v 102 (240)
T 2zgc_A 24 HLCGGVLVHPK-WVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTI 102 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSC
T ss_pred eEEEEEEEcCC-EEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCce
Confidence 47999999987 9999999998653 57777643 234555444443 34699999998754 245
Q ss_pred cccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeeccc---CCCCCcccEEEEc-----cccCCCCC
Q 014786 214 RPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-----AAINPGNS 279 (418)
Q Consensus 214 ~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~-----~~i~~G~S 279 (418)
.++.|.... .+..|+.+++.||..... .......+.-+....+.. ........++... ...|.|+|
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 182 (240)
T 2zgc_A 103 RPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDS 182 (240)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCT
T ss_pred eeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCc
Confidence 667675433 357899999999864321 122222222222211111 1111123444432 35789999
Q ss_pred CCceeCCC-ceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 280 GGPLLDSS-GSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 280 GGPl~n~~-G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
||||+..+ ..++||++++...++.....+....+...++++++.++.
T Consensus 183 GgPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~~ 230 (240)
T 2zgc_A 183 GGPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTGR 230 (240)
T ss_dssp TCEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHCC
T ss_pred cCeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHhh
Confidence 99999632 389999998743333223345667777788888776543
No 68
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.40 E-value=4e-11 Score=111.79 Aligned_cols=171 Identities=16% Similarity=0.144 Sum_probs=103.7
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+ ....|.+.. .+.+..+-+..++ .+|||||+++.+. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 100 (234)
T 1orf_A 23 KTICAGALIAKD-WVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINK 100 (234)
T ss_dssp SCEEEEEEEETT-EEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred ceEEEEEEeeCC-EEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCC
Confidence 357999999987 99999999975 345565532 1344555455443 4699999998753 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCC--C-CcccEEEEc-----cccC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATG--R-PIQDVIQTD-----AAIN 275 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~--~-~~~~~i~~~-----~~i~ 275 (418)
...++.|.... .+..|+.+++.||..... .......+.-+....+. ...+ . ....++... ...|
T Consensus 101 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 180 (234)
T 1orf_A 101 YVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSC 180 (234)
T ss_dssp SSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCC
T ss_pred CeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCC
Confidence 35666665433 357899999999864321 12333333322222221 0001 0 001444442 3578
Q ss_pred CCCCCCceeCCCceEEEEEeeeeC-CCCCCCCccceeecc-cchhhhhhhh
Q 014786 276 PGNSGGPLLDSSGSLIGINTAIYS-PSGASSGVGFSIPVD-TVNGIVDQLV 324 (418)
Q Consensus 276 ~G~SGGPl~n~~G~VVGI~s~~~~-~~~~~~~~~~aIp~~-~i~~~l~~l~ 324 (418)
.|+|||||+. +|.++||++++.. .++.....+...-+. ...+++++.+
T Consensus 181 ~GDSGgPL~~-~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~ 230 (234)
T 1orf_A 181 NGDSGSPLLC-EGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230 (234)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred CCCCCCeEEE-CCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHH
Confidence 9999999996 6899999998752 233223345555566 5666766644
No 69
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.40 E-value=3e-11 Score=111.55 Aligned_cols=182 Identities=16% Similarity=0.165 Sum_probs=107.9
Q ss_pred CCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEc
Q 014786 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFD 196 (418)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d 196 (418)
-|-+|.|......+ ....|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+..+
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~h 78 (224)
T 3rp2_A 12 RPYMAHLDIVTEKG----------LRVICGGFLISRQ-FVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIH 78 (224)
T ss_dssp CTTEEEEEEECTTS----------CEEEEEEEESSSS-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCCC----------cEEEEEeEEeeCC-EEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEEC
Confidence 45677776532111 1347999999987 99999999854 55565532 234555555555
Q ss_pred CC-------CCeEEEEecCCC---CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccCC
Q 014786 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT 260 (418)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~ 260 (418)
+. +|||||+++.+. ....++.|.... .+..|+.+++.||..... .......+.-+....+....
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (224)
T 3rp2_A 79 ESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYR 158 (224)
T ss_dssp TTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTT
T ss_pred CCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhcccc
Confidence 43 599999998754 234566665332 357899999999863211 11222222222222121111
Q ss_pred CCCcccEEEEc-----cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 261 GRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 261 ~~~~~~~i~~~-----~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
.......+... ...+.|+|||||+. ++.++||++++..... ..+....+...++++++.+
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~c~~---~p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 159 YYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHPDAK---PPAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp CCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCTTCC---SCEEEEEHHHHHHHHHHHH
T ss_pred ccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCCCCC---CCcEEEEHHHhHHHHHHHh
Confidence 11122344432 35678999999995 6799999998754221 1445566666666666543
No 70
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.39 E-value=2.2e-11 Score=112.48 Aligned_cols=169 Identities=17% Similarity=0.199 Sum_probs=105.3
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+. +.|++.. .+.+.++-+..++ .+|||||+++.+. .
T Consensus 22 ~~~C~GtLI~~~-~VLTAAhC~~~~--~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~ 98 (223)
T 4i8h_A 22 YHFCGGSLINSQ-WVVSAAHCYKSG--IQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNS 98 (223)
T ss_dssp SEEEEEEECSSS-EEEECGGGCCSS--CEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEEcCC-EEEecHHhCCCC--cEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCC
Confidence 346999999986 999999999854 3444421 2334555555554 4699999998753 2
Q ss_pred CCcccccCCCCCCCCCCEEEEEeCCCCCCC------ceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCC
Q 014786 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLDH------TLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNS 279 (418)
Q Consensus 212 ~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~------~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~S 279 (418)
...++.|... ....|+.+++.||...... ......+.-+....... ........++... ...+.|+|
T Consensus 99 ~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 177 (223)
T 4i8h_A 99 RVASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDS 177 (223)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCT
T ss_pred ceeceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCC
Confidence 4667777544 3678999999998643221 12222222222111111 1111223444442 35788999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||+. +++++||++++.. ++.....+....+...++++++.++
T Consensus 178 GgPl~~-~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 178 GGPVVC-SGKLQGIVSWGSG-CAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp TCEEEE-TTEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcEEE-CCEEEEEEEcCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 999995 6799999998754 2223334566777777888877654
No 71
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.39 E-value=4.6e-11 Score=111.93 Aligned_cols=171 Identities=19% Similarity=0.223 Sum_probs=106.5
Q ss_pred CeEEEEEEEcCCcEEEecccccCC----------------CCeEEEEeCC---------CcEEEEEEEEEcCC-------
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG----------------ASDIRVTFAD---------QSAYDAKIVGFDQD------- 198 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----------------~~~i~V~~~d---------g~~~~a~vv~~d~~------- 198 (418)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. ++.+..+-+..++.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 102 (251)
T 3gov_B 24 QPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 102 (251)
T ss_dssp CEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTB
T ss_pred CeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCC
Confidence 457999999987 99999999954 2457777643 23455555555554
Q ss_pred CCeEEEEecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCC----CCCcccE
Q 014786 199 KDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT----GRPIQDV 267 (418)
Q Consensus 199 ~DlAlLkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~----~~~~~~~ 267 (418)
+|||||+++.+. ....|+.|... ....|+.+++.||..... .......+.-+....+.... ......+
T Consensus 103 ~DIAll~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (251)
T 3gov_B 103 NDVALVELLESPVLNAFVMPICLPEG-PQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDM 181 (251)
T ss_dssp TCCEEEEESSCCCCSSSCCCCBCCSS-CCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTE
T ss_pred CCEEEEEeCCcccCCCceEEeECCCC-CCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCc
Confidence 599999998753 34567777544 357899999999864322 12222222222211111000 1112344
Q ss_pred EEEc-----cccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 268 IQTD-----AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 268 i~~~-----~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
+... ...|.|+|||||+.. +| .++||++++.. ++.....+....+...++++++.+
T Consensus 182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~ 247 (251)
T 3gov_B 182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDD-CGKKDRYGVYSYIHHNKDWIQRVT 247 (251)
T ss_dssp EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCSSCCEEEEETTTTHHHHHHHH
T ss_pred EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCC-CCCCCCCEEEEEHHHhHHHHHHHh
Confidence 5442 457899999999853 34 69999998743 332333566677788888887754
No 72
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.39 E-value=1.6e-11 Score=114.78 Aligned_cols=170 Identities=15% Similarity=0.194 Sum_probs=102.8
Q ss_pred eEEEEEEEcCCcEEEecccccCC--CCeEEEEeCC--------CcEEEEEEEEEcCC---------CCeEEEEecCCC--
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFAD--------QSAYDAKIVGFDQD---------KDVAVLRIDAPK-- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~d--------g~~~~a~vv~~d~~---------~DlAlLkv~~~~-- 210 (418)
..|+|.+|+++ +|||+|||+.+ ...+.|.+.. ++.+..+-+..+++ +|||||+++.+.
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (241)
T 1m9u_A 27 HSCGASLLSST-SALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISL 105 (241)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCC
T ss_pred eeeEEEEEeCC-EEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCcccc
Confidence 57999999986 99999999986 4567777632 33455665555544 399999998764
Q ss_pred -CCCcccccCCC-CCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCC-CC--CcccEEEEc-----cc
Q 014786 211 -DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT-GR--PIQDVIQTD-----AA 273 (418)
Q Consensus 211 -~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~-~~--~~~~~i~~~-----~~ 273 (418)
....++.|... .....|+.+++.||..... .......+.-+....+. +.. .. ....++... ..
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 185 (241)
T 1m9u_A 106 GGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTG 185 (241)
T ss_dssp CSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCB
T ss_pred CCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCe
Confidence 24567777544 2233799999999864322 12333333222221111 100 11 223445442 35
Q ss_pred cCCCCCCCceeCCCc--eEEEEEee--ee-CCCCCCCCccceeecccchhhhhh
Q 014786 274 INPGNSGGPLLDSSG--SLIGINTA--IY-SPSGASSGVGFSIPVDTVNGIVDQ 322 (418)
Q Consensus 274 i~~G~SGGPl~n~~G--~VVGI~s~--~~-~~~~~~~~~~~aIp~~~i~~~l~~ 322 (418)
.|.|+|||||+..+| .++||+++ .. ..++.....+...-+....+++++
T Consensus 186 ~C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 186 ACNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp CCTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred eecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 789999999996545 89999998 32 112222234455556666666654
No 73
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.39 E-value=1.3e-12 Score=120.32 Aligned_cols=159 Identities=18% Similarity=0.177 Sum_probs=96.2
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC--CeE----EEEeCC------CcEEEEEEEEEc--------CCCCeEEEEecCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDI----RVTFAD------QSAYDAKIVGFD--------QDKDVAVLRIDAPK 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i----~V~~~d------g~~~~a~vv~~d--------~~~DlAlLkv~~~~ 210 (418)
...|+|++|+++ +|||+|||+.+. ..+ .|.+.. +..+.++-+..+ ..+|||||+++.+.
T Consensus 29 ~~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPN-KILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI 107 (215)
T ss_dssp SCEEEEEEEETT-EEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSCH
T ss_pred CceEEEEEEeCC-EEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCCC
Confidence 357999999987 999999999653 334 666532 223455544443 34599999998742
Q ss_pred -CCCcccccCCCCCCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeC
Q 014786 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (418)
Q Consensus 211 -~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n 285 (418)
....++.|... ....|+.++++||+.... .......+..+... .+.....+...+.|+|||||+.
T Consensus 108 ~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~---------~c~~~~~~~~~C~GDSGgPl~~ 177 (215)
T 1p3c_A 108 GNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTRE---------DTNLAYYTIDTFSGNSGSAMLD 177 (215)
T ss_dssp HHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEE---------CSSEEEECCCCCTTCTTCEEEC
T ss_pred cccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcc---------cchheeeccccCCCCCCCeeEc
Confidence 12556667543 357899999999973211 11111111111111 1122223667899999999998
Q ss_pred CCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhh
Q 014786 286 SSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (418)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l 323 (418)
.+|.++||++++.... ...+....+....+++++.
T Consensus 178 ~~g~lvGi~S~g~~c~---~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 178 QNQQIVGVHNAGYSNG---TINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TTSCEEEECCEEEGGG---TEEEEEBCCHHHHHHHHHH
T ss_pred cCCeEEEEEecccCCC---ccCceeEechHHHHHHHHH
Confidence 7899999999875421 1222233344445555543
No 74
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.38 E-value=9e-12 Score=116.68 Aligned_cols=169 Identities=18% Similarity=0.204 Sum_probs=98.6
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC------------------CCCeEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (418)
..|+|.+|+++ +|||+|||+.+. +.|.+.. +..+.++-+..++ .+|||||
T Consensus 27 ~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 103 (240)
T 1sgf_A 27 YQCGGVLLDRN-WVLTAAHCYNDK--YQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLL 103 (240)
T ss_dssp CCEEEEECSSS-EEEECGGGCCSC--CEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEE
T ss_pred eEEEEEEecCC-EEEECHHhCCCC--ceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEEE
Confidence 46999999986 999999999753 3444321 2334444333332 4699999
Q ss_pred EecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCCC------ceeEeEEeeeeeeecccCC-CCCcccEEEEc---
Q 014786 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH------TLTTGVISGLRREISSAAT-GRPIQDVIQTD--- 271 (418)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~------~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~~--- 271 (418)
+++.+. ..+.|+.|... ....|+.+++.||...... ......+.-+....+.... ......++...
T Consensus 104 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 182 (240)
T 1sgf_A 104 RLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMD 182 (240)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEECS
T ss_pred EeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccCC
Confidence 998754 24667777644 4678999999998643211 1111122211111111111 11122344432
Q ss_pred --cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 --AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+. +|.++||++++...++.....+....+...++++++.++
T Consensus 183 ~~~~~C~GDSGgPL~~-~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 183 GGSYTCEHDSGGPLIC-DGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp SSEEECCCCTTCEEEE-TTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred CCCCCCCCCCcCcEEE-ccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 24789999999996 789999999874433333345566777778888877654
No 75
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.38 E-value=3.4e-11 Score=112.40 Aligned_cols=173 Identities=13% Similarity=0.122 Sum_probs=106.2
Q ss_pred CeEEEEEEEcCCcEEEecccccCC----CCeEEEEeCC-----------CcEEEEEEEEEcC-CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-----------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d-----------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. .+.+..+-+..++ .+|||||+++.+. .
T Consensus 21 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~ 99 (234)
T 2asu_B 21 QHFCGGSLVKEQ-WILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQ 99 (234)
T ss_dssp CEEEEEEEEETT-EEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSS
T ss_pred CEEEEEEEEeCC-EEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCC
Confidence 457999999987 99999999964 3456676632 1234444444554 5799999998753 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCCCCCC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINPGNSG 280 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~G~SG 280 (418)
.+.++.|.... .+..|+.++++||..... .......+.-+....+.. ........++... ...|.|+||
T Consensus 100 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 179 (234)
T 2asu_B 100 RVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYG 179 (234)
T ss_dssp SSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTT
T ss_pred cEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCC
Confidence 45677775433 356899999999864322 223333332222211111 1111123444442 357889999
Q ss_pred CceeCCC-c--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 281 GPLLDSS-G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 281 GPl~n~~-G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|||+..+ | .++||++++.. ++.....+....+...++++++.++
T Consensus 180 gPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 226 (234)
T 2asu_B 180 GPLACFTHNSWVLEGIIIPNRV-CARSRWPAVFTRVSVFVDWIHKVMR 226 (234)
T ss_dssp CEEEEEETTEEEEEEEECCCSS-SSCTTCCEEEEEGGGSHHHHHHHC-
T ss_pred CceEEEECCeEEEEEEEEcCCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 9999643 3 79999998743 2222345566777777888877654
No 76
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.38 E-value=3.3e-11 Score=111.97 Aligned_cols=172 Identities=17% Similarity=0.150 Sum_probs=104.5
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC------cEEEEEEEEEcC-------CCCeEEEEecCCC---CCCc
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLR 214 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~ 214 (418)
...|+|.+|+++ +|||+|||+.+...+.|.+... ..+..+-+..++ .+|||||+++ +. ....
T Consensus 27 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~ 104 (230)
T 2hlc_A 27 RVWCGGSLIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQ 104 (230)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECS-CCCCCSSCC
T ss_pred CEEEEEEEeeCC-EEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEec-CCCcCCcEe
Confidence 357999999987 9999999999877777877532 234444344443 4699999998 43 3466
Q ss_pred ccccCCCC---CCCCCCEEEEEeCCCCCCC--ceeEeEEeeeeeeecccCCC--CCcccEEEEc----cccCCCCCCCce
Q 014786 215 PIPIGVSA---DLLVGQKVYAIGNPFGLDH--TLTTGVISGLRREISSAATG--RPIQDVIQTD----AAINPGNSGGPL 283 (418)
Q Consensus 215 ~~~l~~~~---~~~~G~~V~~vG~p~g~~~--~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~~----~~i~~G~SGGPl 283 (418)
|+.|.... ....|+.+++.||...... ......+.-+....+..... .....++... ...+.|+|||||
T Consensus 105 picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl 184 (230)
T 2hlc_A 105 PIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPF 184 (230)
T ss_dssp CCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEE
T ss_pred eeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCee
Confidence 77775433 2457899999998754322 22222222222211111111 1223344432 357899999999
Q ss_pred eCC-CceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 284 LDS-SGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 284 ~n~-~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
+.. ++.++||+++...........+....+....+++++.+
T Consensus 185 ~~~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 185 VLSDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp EEGGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHH
T ss_pred EECcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhh
Confidence 853 45899999986521112233444566667777776644
No 77
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.37 E-value=6.8e-11 Score=109.37 Aligned_cols=167 Identities=19% Similarity=0.188 Sum_probs=102.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcCC-------CCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+.. .+.|.+.. ++.+..+-+..+++ +|||||+++.+. ..
T Consensus 28 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (227)
T 3fzz_A 28 MFCGGFLVRDK-FVLTAAHCKGR--SMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRA 104 (227)
T ss_dssp EEEEEEEEETT-EEEECTTCCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEEeCC-EEEECcccCCC--CcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCc
Confidence 47999999987 99999999853 45555532 23455555555554 599999998754 23
Q ss_pred CcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-----cccCCCCC
Q 014786 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINPGNS 279 (418)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~i~~G~S 279 (418)
..++.|.... .+..|+.+++.||..... .......+.-+....+. +........++... ...+.|+|
T Consensus 105 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDs 184 (227)
T 3fzz_A 105 VRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDS 184 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTT
T ss_pred ccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCC
Confidence 5666665432 357899999999864221 12233333222221111 11111122344432 34678999
Q ss_pred CCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 280 GGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||||+. ++.++||++++... +. ..+....+...++++++.++
T Consensus 185 GgPl~~-~~~l~Gi~S~g~~c-~~--~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 185 GGPLVC-KRAAAGIVSYGQTD-GS--APQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp TCEEEE-TTEEEEEEEECCTT-CS--SSEEEEEGGGTHHHHHHHHT
T ss_pred ccceEE-ecCCcEEEEECCCC-CC--CCeEEEEhHHhHHHHHHHHh
Confidence 999995 57999999987542 21 24556667777777776554
No 78
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.37 E-value=6e-11 Score=110.18 Aligned_cols=167 Identities=19% Similarity=0.158 Sum_probs=101.3
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (418)
..|+|.+|+++ +|||+|||+.+ .+.|++.. .+.+..+-+..++ .+|||||+++.+. ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1euf_A 27 HICGGFLVRED-FVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDK 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCC-EEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCc
Confidence 47999999987 99999999975 45565532 2344555444544 4599999998753 24
Q ss_pred CcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccCC-CCCcccEEEEc-----cccCCCCCC
Q 014786 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINPGNSG 280 (418)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~~-----~~i~~G~SG 280 (418)
..|+.|.... .+..|+.+++.||..... .......+.-+....+.... ......++... ...+.|+||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsG 183 (227)
T 1euf_A 104 VSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSG 183 (227)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCC
Confidence 5667775432 357899999999864321 12222223222221111111 11122345442 223489999
Q ss_pred CceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 281 GPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|||+. +|.++||++++. +.....+...-+...++++++.++
T Consensus 184 gPL~~-~~~l~Gi~S~gc---~~~~~p~vyt~V~~y~~WI~~~~~ 224 (227)
T 1euf_A 184 GPLVC-NGVAQGIVSYGR---NDGTTPDVYTRISSFLSWIHSTMR 224 (227)
T ss_dssp CEEEE-TTEEEEEEEECC---TTCCSCEEEEEGGGTHHHHHHHTC
T ss_pred CceEE-CCEEEEEEEEeC---CCCCCCeEEEEHHHhHHHHHHHHh
Confidence 99995 689999999872 222234555666777777766543
No 79
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.37 E-value=6.5e-11 Score=110.72 Aligned_cols=171 Identities=17% Similarity=0.196 Sum_probs=104.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcCC---------CCeEEEEecCC-
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAP- 209 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~- 209 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. +..+.++-+..+++ +|||||+++.+
T Consensus 29 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 29 YVCGGSLISPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred eEEEEEEEeCC-EEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 47999999987 999999999753 346676642 23455555555443 59999999865
Q ss_pred ------CCCCcccccCCC-CCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccC--C-CCCcccEEEEc--
Q 014786 210 ------KDKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQTD-- 271 (418)
Q Consensus 210 ------~~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~-~~~~~~~i~~~-- 271 (418)
.....++.|... ..+..|+.+++.||..... .......+.-+....+... . ......++...
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 134566666543 3467799999999874322 1223333322222211110 0 11122344432
Q ss_pred ---cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
...|.|+|||||+.. +| .++||++++.. ++.....+....+...++++++.+
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~ 245 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHT 245 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGCHHHHHHHT
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHh
Confidence 357899999999954 34 59999998743 222334456667777777777654
No 80
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.36 E-value=3e-11 Score=113.86 Aligned_cols=174 Identities=19% Similarity=0.245 Sum_probs=106.4
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+...+.|++.. +..+.++-+..++ .+|||||+++.+. .
T Consensus 24 ~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (250)
T 1aut_C 24 KLACGAVLIHPS-WVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQ 102 (250)
T ss_dssp CEEEEEEEEETT-EEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred ceEEEEEEeeCC-EEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 357999999987 999999999887777777743 2234555455554 3699999998754 2
Q ss_pred CCcccccCCCC-----CCCCCCEEEEEeCCCCCCC----------ceeEeEEeeeeeeeccc-CCCCCcccEEEEc----
Q 014786 212 KLRPIPIGVSA-----DLLVGQKVYAIGNPFGLDH----------TLTTGVISGLRREISSA-ATGRPIQDVIQTD---- 271 (418)
Q Consensus 212 ~~~~~~l~~~~-----~~~~G~~V~~vG~p~g~~~----------~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~---- 271 (418)
...|+.|.... ....|+.+++.||...... ......+.-+....+.. ........++...
T Consensus 103 ~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~ 182 (250)
T 1aut_C 103 TIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGD 182 (250)
T ss_dssp TBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTC
T ss_pred ceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCC
Confidence 34566664321 1357999999998743221 12222222111111110 0111123445442
Q ss_pred -cccCCCCCCCceeCC-Cce--EEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 272 -AAINPGNSGGPLLDS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 272 -~~i~~G~SGGPl~n~-~G~--VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
...|.|+|||||+.. +|+ ++||++++.. ++.....+...-+...++++++.++.
T Consensus 183 ~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 240 (250)
T 1aut_C 183 RQDACEGDSGGPMVASFHGTWFLVGLVSWGEG-CGLLHNYGVYTKVSRYLDWIHGHIRD 240 (250)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEECGGGTHHHHHHHHC-
T ss_pred CCCCCCCCCchheEEEECCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHhhc
Confidence 357899999999963 564 9999998743 22223345566777777777776543
No 81
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.36 E-value=5.6e-11 Score=110.84 Aligned_cols=170 Identities=15% Similarity=0.177 Sum_probs=103.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCC--------CeEEEEeCC----------CcEEEEEEEEEcC-------CCCeEEEEe
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA--------SDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRI 206 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--------~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv 206 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+.++-+..++ .+|||||++
T Consensus 25 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L 103 (241)
T 3ncl_A 25 HICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLEL 103 (241)
T ss_dssp EEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred eEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 47999999987 999999999653 346666531 2345555555554 469999999
Q ss_pred cCCC---CCCcccccCCC-CCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccC-CCCCcccEEEE-----c
Q 014786 207 DAPK---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA-TGRPIQDVIQT-----D 271 (418)
Q Consensus 207 ~~~~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~-----~ 271 (418)
+.+. ....++.|... ..+..|+.+++.||..... .......+.-+....+... .......++.. .
T Consensus 104 ~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 183 (241)
T 3ncl_A 104 EKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGG 183 (241)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCS
T ss_pred CCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCCCC
Confidence 8753 24566666543 2356799999999864321 1222323322222111111 11112234443 2
Q ss_pred cccCCCCCCCceeC--CCce--EEEEEeeeeCCCCCCCCccceeecccchhhhhhh
Q 014786 272 AAINPGNSGGPLLD--SSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (418)
Q Consensus 272 ~~i~~G~SGGPl~n--~~G~--VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l 323 (418)
...|.|+|||||+. .+|+ ++||++++.. ++.....+....+...++++++.
T Consensus 184 ~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~-c~~~~~p~vyt~v~~y~~WI~~~ 238 (241)
T 3ncl_A 184 VDSCQGDSGGPLSSVEADGRIFQAGVVSWGDG-CAQRNKPGVYTRLPLFRDWIKEN 238 (241)
T ss_dssp SBCCTTCTTCEEEEECTTSCEEEEEEEEECSS-SSCTTCCEEEEESGGGHHHHHHH
T ss_pred CccCCCcCCCCEEEEcCCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHH
Confidence 35789999999983 3565 8999998743 22223345566667777777664
No 82
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.36 E-value=3.3e-11 Score=112.26 Aligned_cols=174 Identities=16% Similarity=0.170 Sum_probs=106.2
Q ss_pred CeEEEEEEEcCCcEEEecccccCC----CCeEEEEeCCC-------cEEEEEEEEEcC--------CCCeEEEEecCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~- 210 (418)
...|+|.+|+++ +|||+|||+.+ ...+.|.+... ..+..+.+..++ .+|||||+++.+.
T Consensus 21 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~ 99 (242)
T 3tvj_B 21 GTTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVV 99 (242)
T ss_dssp SEEEEEEEETTT-EEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCC
T ss_pred CCcEEEEEecCC-EEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCccc
Confidence 347999999987 99999999954 44566766432 234444444442 4699999998754
Q ss_pred --CCCcccccCCCC---CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeeccc--C-----CCCCcccEEEEc---
Q 014786 211 --DKLRPIPIGVSA---DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA--A-----TGRPIQDVIQTD--- 271 (418)
Q Consensus 211 --~~~~~~~l~~~~---~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~--~-----~~~~~~~~i~~~--- 271 (418)
..+.++.|.... .+..|+.+++.||..... .......+.-+....+.. . .......++...
T Consensus 100 ~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~ 179 (242)
T 3tvj_B 100 INSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLES 179 (242)
T ss_dssp CBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTT
T ss_pred cCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCC
Confidence 346677775443 267899999999864322 122222222222111110 0 001223445442
Q ss_pred --cccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 --AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+.. +| .++||++++...++.....+....+...++++++.++
T Consensus 180 ~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 240 (242)
T 3tvj_B 180 GGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 240 (242)
T ss_dssp CCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 457899999999852 33 4999999874444333334566777777788777553
No 83
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.36 E-value=6.6e-11 Score=110.75 Aligned_cols=172 Identities=19% Similarity=0.229 Sum_probs=104.9
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC--
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK-- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-- 210 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+.
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (241)
T 2any_A 27 HLCGGSLIGHQ-WVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEY 105 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCC
T ss_pred eEEEEEEecCC-EEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccC
Confidence 47999999987 999999999764 446666532 2234445444543 4699999998754
Q ss_pred -CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccCC-C-CCcccEEEEc-----cccCC
Q 014786 211 -DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-G-RPIQDVIQTD-----AAINP 276 (418)
Q Consensus 211 -~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~-~~~~~~i~~~-----~~i~~ 276 (418)
....|+.|.... ....|+.++++||..... .......+.-+....+.... . .....++... ...|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (241)
T 2any_A 106 TEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACK 185 (241)
T ss_dssp BTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCT
T ss_pred CCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCC
Confidence 235566665432 356799999999874322 12222223222222111111 1 1123445442 35789
Q ss_pred CCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 277 GNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 277 G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|+|||||+.. +| .++||++++.. ++.....+...-+...++++++.++
T Consensus 186 GDsGgPl~~~~~~~~~l~GI~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 186 GDSGGPLVCKHNGMWRLVGITSWGEG-CARREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCCcEEEEECCEEEEEEEEEecCC-CCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 9999999964 45 69999998753 2222334556677777788777654
No 84
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.35 E-value=9.3e-11 Score=110.53 Aligned_cols=172 Identities=16% Similarity=0.169 Sum_probs=105.0
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC----------cEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ----------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg----------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
..|+|.+|+++ +|||+|||+.+...+.|.+... ..+..+-+..++ .+|||||+++.+. .
T Consensus 41 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 119 (251)
T 1pyt_D 41 HTCGGTLITPN-HVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGD 119 (251)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCS
T ss_pred eEEEeEEecCC-EEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCC
Confidence 47999999987 9999999999887888877421 234455455543 3599999998753 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCCCCCCC-----ceeEeEEeeeeeeecccC---CCCCcccEEEEc----cccCCCC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAA---TGRPIQDVIQTD----AAINPGN 278 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~~----~~i~~G~ 278 (418)
.+.++.|.... .+..|+.+++.||...... ......+.-+........ .......++... ...|.|+
T Consensus 120 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 199 (251)
T 1pyt_D 120 TIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGD 199 (251)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSC
T ss_pred CeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCC
Confidence 35666675433 3567899999998643211 122222221221111110 011123445442 3578999
Q ss_pred CCCceeCC-Cc--eEEEEEeeeeC-CCCCCCCccceeecccchhhhhhhh
Q 014786 279 SGGPLLDS-SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 279 SGGPl~n~-~G--~VVGI~s~~~~-~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
|||||+.. +| .++||++++.. .++.....+...-+....+++++.+
T Consensus 200 SGgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~ 249 (251)
T 1pyt_D 200 SGGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQKL 249 (251)
T ss_dssp TTCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHHT
T ss_pred CCCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 99999954 45 69999998752 2332233455566666777776643
No 85
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.35 E-value=1.5e-10 Score=107.62 Aligned_cols=170 Identities=12% Similarity=0.184 Sum_probs=103.4
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC-----CcEEEEEEEEEcC-------CCCeEEEEecCCC---CCC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-----QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKL 213 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-----g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~ 213 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. +..+..+-+..++ .+|||||+++.+. ..+
T Consensus 24 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 102 (232)
T 2oq5_A 24 HRCGATLINAT-WLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAV 102 (232)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSS
T ss_pred eeEEEEEEcCC-EEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCce
Confidence 57999999987 999999999763 356776632 2344555455543 4599999998764 235
Q ss_pred cccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeeccc---CCCCCcccEEEEc-----cccCCCCC
Q 014786 214 RPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-----AAINPGNS 279 (418)
Q Consensus 214 ~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~-----~~i~~G~S 279 (418)
.++.|.... .+..|+.+++.||..... .......+.-+....+.. ........++... ...|.|+|
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 182 (232)
T 2oq5_A 103 HRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDS 182 (232)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCT
T ss_pred eEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCC
Confidence 667665432 356799999999864321 123333333222221211 0111123445442 35789999
Q ss_pred CCceeCCC--c--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhh
Q 014786 280 GGPLLDSS--G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (418)
Q Consensus 280 GGPl~n~~--G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l 323 (418)
||||+..+ | .++||++++.. ++.....+...-+...++++++.
T Consensus 183 GgPL~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~ 229 (232)
T 2oq5_A 183 GGPLVSSDARDIWYLAGIVSWGDE-CAKPNKPGVYTRVTALRDWITSK 229 (232)
T ss_dssp TCEEEEECTTSCEEEEEEEEECSS-SSBTTBCEEEEETGGGHHHHHHH
T ss_pred CCcEEEECCCCCEEEEEEEEeCCC-CCCCCCCeEEEEhHHhHHHHHHH
Confidence 99999533 3 69999998743 22222345556666667776654
No 86
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.35 E-value=9.2e-11 Score=110.14 Aligned_cols=173 Identities=17% Similarity=0.213 Sum_probs=106.9
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEc--------CCCCeEEEEecCC--
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFD--------QDKDVAVLRIDAP-- 209 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d--------~~~DlAlLkv~~~-- 209 (418)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..+ ..+|||||+++.+
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~ 101 (248)
T 2r0l_A 23 SFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGD 101 (248)
T ss_dssp EEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSSS
T ss_pred ceEEEEEEcCC-EEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCccc
Confidence 47999999987 999999999764 467777643 223444444333 2469999999875
Q ss_pred --C---CCCcccccCCC-CCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccC--CC-CCcccEEEEc---
Q 014786 210 --K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD--- 271 (418)
Q Consensus 210 --~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~~--- 271 (418)
. ..+.++.|... ..+..|+.+++.||..... .......+.-+....+... .+ .....++...
T Consensus 102 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 181 (248)
T 2r0l_A 102 RCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFD 181 (248)
T ss_dssp CSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSS
T ss_pred ccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCCC
Confidence 1 23566767543 3466899999999864321 1233333332222211110 01 1123445442
Q ss_pred --cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 272 --AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
...|.|+|||||+.. +| .++||++++.. ++.....+....+...++++++.++.
T Consensus 182 ~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 240 (248)
T 2r0l_A 182 CKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIRP 240 (248)
T ss_dssp SCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHHC-
T ss_pred CCCcCCCCccCCeEEEEECCcEEEEEEEEeCCC-CCCCCCCcEEEEHHHHHHHHHHHhcC
Confidence 357899999999964 45 59999998743 22223455667777778888776543
No 87
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.35 E-value=1e-10 Score=111.94 Aligned_cols=170 Identities=18% Similarity=0.224 Sum_probs=101.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCC------CeEEEEeCC--------------------CcEEEEEEEEEcC--------
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA------SDIRVTFAD--------------------QSAYDAKIVGFDQ-------- 197 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~------~~i~V~~~d--------------------g~~~~a~vv~~d~-------- 197 (418)
..|.|.+|+++ ||||+|||+.+. ..+.|++.. ...+..+-+..++
T Consensus 51 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 51 FACGGSLINNR-YIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEECSSS-EEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred eeEEEEEEeCC-EEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 47999999986 999999999762 345666532 1233344344432
Q ss_pred -CCCeEEEEecCCC---CCCcccccCCCC-CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCCC----CCc
Q 014786 198 -DKDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----RPI 264 (418)
Q Consensus 198 -~~DlAlLkv~~~~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~----~~~ 264 (418)
.+|||||+++.+. ..+.|+.|.... .+..|+.++++||..... .......+.-+....+..... ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 4699999998753 245677775443 367899999999864322 122222222222221111100 112
Q ss_pred ccEEEEc----cccCCCCCCCceeCC--Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhh
Q 014786 265 QDVIQTD----AAINPGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQL 323 (418)
Q Consensus 265 ~~~i~~~----~~i~~G~SGGPl~n~--~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l 323 (418)
..++... ...|.|+|||||+.. +| .++||++++.. ++....-+...-+...++++++.
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~ 275 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGAT-CGTEGWPGIYTKVGKYRDWIEGN 275 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCB-CSTTCBCEEEEEGGGGHHHHHTT
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCC-CCCCCCCcEEeEHHHHHHHHHHh
Confidence 2345442 357899999999954 34 59999998743 22222245556666666766654
No 88
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.34 E-value=2.3e-11 Score=112.59 Aligned_cols=169 Identities=15% Similarity=0.222 Sum_probs=103.0
Q ss_pred EEEEEEEcCCcEEEecccccCC--CCeEEEEeCCC--------cEEEEEEEEEc------CCCCeEEEEecCCCC----C
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFADQ--------SAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~dg--------~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (418)
.|+|.+|+++ +|||+|||+.+ ...+.|.+... ..+..+.+..+ ..+|||||+++.+.. .
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~ 105 (228)
T 3h7o_A 27 TCGGAILSQW-FVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLK 105 (228)
T ss_dssp EEEEEESSSS-EEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred EeeeEEeeCC-EEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCcccccccc
Confidence 7999999986 99999999964 34566665321 12223322222 246999999987642 4
Q ss_pred CcccccCCCC-CCCCCCEEEEEeCCCCCCC-----ceeEeEEeeeeeeecc--cCCCCCcccEEEEc---cccCCCCCCC
Q 014786 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISS--AATGRPIQDVIQTD---AAINPGNSGG 281 (418)
Q Consensus 213 ~~~~~l~~~~-~~~~G~~V~~vG~p~g~~~-----~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~---~~i~~G~SGG 281 (418)
..++.|.... .+..|+.+++.||...... ......+.-+....+. +........++... ...+.|+|||
T Consensus 106 v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGg 185 (228)
T 3h7o_A 106 SKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGD 185 (228)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTC
T ss_pred cccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCC
Confidence 5677775443 2678999999998754221 2233333222221111 10001112334332 4578899999
Q ss_pred ceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 282 PLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 282 Pl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||+. +++++||+++... ++ ....+...-+...++++++.++
T Consensus 186 Pl~~-~~~l~Gi~S~g~~-c~-~~~p~vyt~v~~~~~WI~~~i~ 226 (228)
T 3h7o_A 186 PTVQ-QDTLVGVAAYFPK-RP-EGAPEVFTKVGSYVSWIQDIIK 226 (228)
T ss_dssp EEEE-TTEEEEEECCCTT-CC-TTCCEEEEEGGGTHHHHHHHHT
T ss_pred ccee-cCeEEEEEeecCc-CC-CCCCcEEEEHHHHHHHHHHHhh
Confidence 9996 7789999998643 22 2345566777777888877654
No 89
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.33 E-value=4.7e-11 Score=111.33 Aligned_cols=171 Identities=20% Similarity=0.209 Sum_probs=104.4
Q ss_pred eEEEEEEEcCCcEEEecccccCCC--CeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~ 104 (238)
T 1ym0_A 26 HFCGGSIINDR-WVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFD 104 (238)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCcccc
Confidence 47999999987 999999999764 567777642 2345555455543 4699999998754
Q ss_pred CCCcccccCCCCCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-------cccC
Q 014786 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AATGRPIQDVIQTD-------AAIN 275 (418)
Q Consensus 211 ~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-------~~i~ 275 (418)
..+.|+.|........++.+++.||..... .......+.-+....+. +........++... ...|
T Consensus 105 ~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C 184 (238)
T 1ym0_A 105 INVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSC 184 (238)
T ss_dssp SSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCC
T ss_pred CcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCccC
Confidence 245667775443323789999999864322 12222233222211111 11001123444432 4678
Q ss_pred CCCCCCceeCC--Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 276 PGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 276 ~G~SGGPl~n~--~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
.|+|||||+.. +| .++||++++.. ++ ....+....+...++++++.++
T Consensus 185 ~GDsGgPL~~~~~~~~~~l~Gi~S~g~~-C~-~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 185 QGDSGGPLSVKDGSGIFSLVGIVSWGIG-CA-SGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp TTTTTCEEEEECTTCCEEEEEEEEECSS-SS-SSSCEEEEEHHHHHHHHHHHHH
T ss_pred CCccCCeeEEECCCCCEEEEEEEeECCC-CC-CCCCcEEEEHHHhHHHHHHHhc
Confidence 99999999864 34 69999998743 22 2334555666666677766544
No 90
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.33 E-value=6.1e-11 Score=109.54 Aligned_cols=169 Identities=15% Similarity=0.174 Sum_probs=102.0
Q ss_pred EEEEEEEcCCcEEEecccccCCC---CeEEEEeCC-------CcEEEEEEEEEcCC-------CCeEEEEecCCCCCCcc
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-------QSAYDAKIVGFDQD-------KDVAVLRIDAPKDKLRP 215 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~~~~~~~~ 215 (418)
.|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+..+++ +|||||+++.+. .+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v-~~~~ 98 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI-NQPT 98 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC-CSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC-CCCc
Confidence 4999999987 999999999864 345666532 23455554555543 599999999875 4677
Q ss_pred cccCCCCCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-----cccCCCCCCCce
Q 014786 216 IPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINPGNSGGPL 283 (418)
Q Consensus 216 ~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~i~~G~SGGPl 283 (418)
+.+.... ...++.++++||..... .......+.-+....+. +........++... ...+.|+|||||
T Consensus 99 i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl 177 (224)
T 3beu_A 99 LKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPM 177 (224)
T ss_dssp CEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred ccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence 7776443 34566899999864322 12223333222221111 11011223444442 357899999999
Q ss_pred eCCC--c--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 284 LDSS--G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 284 ~n~~--G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
+..+ | .++||++++.. ++.....+....+....+++++.++
T Consensus 178 ~~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~ 222 (224)
T 3beu_A 178 FRKDNADEWVQVGIVSWGEG-CARKGKYGVYTEVSTFASAIASAAR 222 (224)
T ss_dssp EEECTTSCEEEEEEEEEESS-SSCTTCCEEEEEHHHHHHHHHHHHT
T ss_pred EEecCCCCEEEEEEeccCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 9543 3 69999998753 2222334555666666677666543
No 91
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.33 E-value=6.5e-11 Score=110.65 Aligned_cols=172 Identities=18% Similarity=0.210 Sum_probs=103.9
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (418)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. ++.+..+-+..++ .+|||||+++.+.
T Consensus 26 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 104 (238)
T 3bg8_A 26 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 104 (238)
T ss_dssp EEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCC
T ss_pred cEEEEEEEeeCC-EEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCccc
Confidence 357999999987 999999999764 457776531 3345555555554 3699999998754
Q ss_pred --CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCCCCcccEEEE-----ccccC
Q 014786 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAIN 275 (418)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----~~~i~ 275 (418)
....|+.|.... ....++.+++.||..... .......+.-+....+. +........++.. ....|
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C 184 (238)
T 3bg8_A 105 YTDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 184 (238)
T ss_dssp CBTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCC
T ss_pred cCCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcC
Confidence 245666665432 356788999999864321 12222222211111111 1110112344444 23578
Q ss_pred CCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 276 ~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
.|+|||||+.. +| .++||++++.. ++.....+...-+....+++++.+
T Consensus 185 ~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~ 235 (238)
T 3bg8_A 185 KGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEKT 235 (238)
T ss_dssp TTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCCcceEEEECCeEEEEEEEEECCC-CCCCCCCcEEEeHHHHHHHHHHHH
Confidence 99999999964 44 59999998743 222233455666677777776654
No 92
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.33 E-value=1.3e-10 Score=110.80 Aligned_cols=172 Identities=17% Similarity=0.193 Sum_probs=104.6
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcCC---------CCeEEEEecCC-
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQD---------KDVAVLRIDAP- 209 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~~---------~DlAlLkv~~~- 209 (418)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. +..+.++-+..+++ +|||||+++.+
T Consensus 52 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 130 (276)
T 2jde_A 52 YVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130 (276)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTT
T ss_pred eeeeeEEeeCC-EEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCcc
Confidence 47999999987 999999999753 356676642 22455554544432 59999999865
Q ss_pred ------CCCCcccccCCC-CCCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc---CCCCCcccEEEEc--
Q 014786 210 ------KDKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-- 271 (418)
Q Consensus 210 ------~~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~-- 271 (418)
...+.++.|... ..+..|+.+++.||..... .......+.-+....+.. ........++...
T Consensus 131 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 210 (276)
T 2jde_A 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 210 (276)
T ss_dssp SCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECT
T ss_pred ccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCC
Confidence 134566666543 3467799999999874322 122333332222221111 0011122344432
Q ss_pred ---cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+.. +| .++||++++.. ++.....+....+....+++++.++
T Consensus 211 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 269 (276)
T 2jde_A 211 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPWIRSHTK 269 (276)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHTC-
T ss_pred CCCCcccccccCcceEEEeCCcEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 457899999999953 44 49999998743 2223344566677777787776543
No 93
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.32 E-value=8.4e-11 Score=110.97 Aligned_cols=173 Identities=19% Similarity=0.208 Sum_probs=105.5
Q ss_pred CeEEEEEEEcCCcEEEecccccCC---CCeEEEEeCC---------CcEEEEEEEEEcCC-------CCeEEEEecCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD---------QSAYDAKIVGFDQD-------KDVAVLRIDAPK- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~d---------g~~~~a~vv~~d~~-------~DlAlLkv~~~~- 210 (418)
...|+|.+|+++ +|||+|||+.+ ...+.|.+.. ...+..+-+..++. +|||||+++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (261)
T 3gyl_B 23 VHVCGGSLVSEQ-WVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPIT 101 (261)
T ss_dssp EEEEEEEECSSS-EEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCC
T ss_pred ceEEEEEEEcCC-EEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCcc
Confidence 357999999987 99999999963 2456777642 12445555555543 499999998754
Q ss_pred --CCCcccccCCC-CCCCCCCEEEEEeCCCCCC-------CceeEeEEeeeeeeecc--cC-------CCCCcccEEEEc
Q 014786 211 --DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISS--AA-------TGRPIQDVIQTD 271 (418)
Q Consensus 211 --~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-------~~~~~G~Vs~~~~~~~~--~~-------~~~~~~~~i~~~ 271 (418)
..+.++.|... ..+..|+.+++.||..... .......+.-+....+. +. .......++...
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~ 181 (261)
T 3gyl_B 102 FSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAG 181 (261)
T ss_dssp CBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEES
T ss_pred CCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeC
Confidence 24566666433 3356799999999874321 12222222222211111 00 011123445442
Q ss_pred -----cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 -----AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 -----~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+.. +| .++||++++.. ++.....+....+...++++++.++
T Consensus 182 ~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~-c~~~~~p~vyt~v~~~~~WI~~~i~ 242 (261)
T 3gyl_B 182 YVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDA-CGARNRPGVYTLASSYASWIQSKVT 242 (261)
T ss_dssp CSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCC-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCC-CCCCCCCCEEEEHHHhHHHHHHHHh
Confidence 357899999999964 45 59999998743 2223345566777777788777654
No 94
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.32 E-value=1.3e-10 Score=108.59 Aligned_cols=167 Identities=17% Similarity=0.226 Sum_probs=102.2
Q ss_pred EEEEEEEcCCcEEEecccccCCC-----CeEEEEeCC-------C--cEEEEEEEEEcC-------CCCeEEEEecCCC-
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGA-----SDIRVTFAD-------Q--SAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~-----~~i~V~~~d-------g--~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (418)
.|+|.+|+++ +|||+|||+.+. ..+.|.+.. + +.+.++-+..++ .+|||||+++.+.
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 107 (237)
T 2f91_A 29 FCGASIYNEN-YAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLT 107 (237)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred eEEEEEeeCC-EEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCcc
Confidence 4999999987 999999999753 457777632 2 345555555554 4699999998764
Q ss_pred --CCCcccccCCCCCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-----cccCC
Q 014786 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AAINP 276 (418)
Q Consensus 211 --~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~i~~ 276 (418)
....|+.|.... ...++.+++.||..... .......+.-+....+. +........++... ...|.
T Consensus 108 ~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 186 (237)
T 2f91_A 108 FNDNVAPIALPEQG-HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186 (237)
T ss_dssp CBTTBCCCBCCCTT-CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCT
T ss_pred cCCceeeccCCCCC-CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCC
Confidence 246677776443 46789999999864321 12223233222211111 11011123445442 35789
Q ss_pred CCCCCceeCCCc---eEEEEEeeeeCCCCCCCCccceeecccchhhhhh
Q 014786 277 GNSGGPLLDSSG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQ 322 (418)
Q Consensus 277 G~SGGPl~n~~G---~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~ 322 (418)
|+|||||+..++ .++||++++.. ++.....+...-+...++++++
T Consensus 187 GDSGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~~~~WI~~ 234 (237)
T 2f91_A 187 GDSGGPLAASDTGSTYLAGIVSWGYG-CARPGYPGVYTEVSYHVDWIKA 234 (237)
T ss_dssp TCTTCEEEECTTSSCEEEEEEEEESS-SSCTTCCEEEEEGGGSHHHHHH
T ss_pred CcCCCCeEEecCCCEEEEEEEEecCC-CCCCCCCcEEEEHHHhHHHHHH
Confidence 999999996432 79999998743 2222234455666666666665
No 95
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.31 E-value=2.5e-10 Score=107.32 Aligned_cols=171 Identities=15% Similarity=0.187 Sum_probs=104.1
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAP--- 209 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~--- 209 (418)
..|+|.+|+++ +|||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+
T Consensus 30 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 30 FLCGGILISSC-WILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEECSSS-EEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred EEEEEEEEeCC-EEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 47999999986 999999999753 457777642 2345555455543 469999999876
Q ss_pred -C---CCCcccccCCCC-CCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccC---CCCCcccEEEEc----
Q 014786 210 -K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA---TGRPIQDVIQTD---- 271 (418)
Q Consensus 210 -~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~~---- 271 (418)
. ..+.++.|.... .+..++.+++.||..... .......+.-+....+... .......++...
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 2 235666665432 356789999999864321 1223333322222211110 011122344432
Q ss_pred -------cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 272 -------AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 272 -------~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
...|.|+|||||+.. +| .++||++++.. ++....-+...-+...++++++.+
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~ 250 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLG-CGQKDVPGVYTKVTNYLDWIRDNM 250 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCC-CCCCCCCeEEEEHHHHHHHHHHhc
Confidence 457899999999954 45 69999998753 222223455666677777776643
No 96
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.31 E-value=1.5e-10 Score=111.16 Aligned_cols=173 Identities=17% Similarity=0.218 Sum_probs=106.9
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEc--------CCCCeEEEEecCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFD--------QDKDVAVLRIDAP- 209 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d--------~~~DlAlLkv~~~- 209 (418)
...|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..+ ..+|||||+++.+
T Consensus 57 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~ 135 (283)
T 1yc0_A 57 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 135 (283)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBT
T ss_pred CcEEEEEEeeCC-EEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCc
Confidence 357999999987 999999999764 467777743 123444444333 2459999999875
Q ss_pred ---C---CCCcccccCCC-CCCCCCCEEEEEeCCCCC------CCceeEeEEeeeeeeeccc--CCC-CCcccEEEEc--
Q 014786 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGL------DHTLTTGVISGLRREISSA--ATG-RPIQDVIQTD-- 271 (418)
Q Consensus 210 ---~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~------~~~~~~G~Vs~~~~~~~~~--~~~-~~~~~~i~~~-- 271 (418)
. ..+.++.|... ..+..|+.+++.||.... ........+.-+....+.. ..+ .....++...
T Consensus 136 ~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~ 215 (283)
T 1yc0_A 136 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 215 (283)
T ss_dssp TBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCC
Confidence 1 24566666543 346689999999986432 1223333333222222211 011 1122445442
Q ss_pred ---cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+.. +| .++||++++.. ++.....+....+....+++++.++
T Consensus 216 ~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 274 (283)
T 1yc0_A 216 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGDG-CGRLHKPGVYTRVANYVDWINDRIR 274 (283)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECST-TTCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred CCCCccCCCCCCCceEEEECCcEEEEEEEEECCC-CCCCCCCeEEEEhhhHHHHHHHHhc
Confidence 357899999999964 45 59999998753 2222345566677777788877654
No 97
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.31 E-value=5.9e-11 Score=111.09 Aligned_cols=174 Identities=18% Similarity=0.205 Sum_probs=107.2
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+...+.|++.+ ...+..+.+..++ .+|||||+++.+. .
T Consensus 24 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (241)
T 2jkh_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (241)
T ss_dssp CEEEEEEECSSS-EEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEeeCC-EEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCC
Confidence 457999999986 999999999887777787743 1234555555554 3599999998764 2
Q ss_pred CCcccccCCCC----CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeeccc-CCCCCcccEEEEc-----cccCC
Q 014786 212 KLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA-ATGRPIQDVIQTD-----AAINP 276 (418)
Q Consensus 212 ~~~~~~l~~~~----~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~~-----~~i~~ 276 (418)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.. ........++... ...|.
T Consensus 103 ~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (241)
T 2jkh_A 103 NVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQ 182 (241)
T ss_dssp TBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCT
T ss_pred CEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCc
Confidence 35666665322 145789999999864321 122222222222111110 0111123344432 35789
Q ss_pred CCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 277 GNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 277 G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
|+|||||+.. +| .++||++++.. ++.....+....+...++++++.++.
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 234 (241)
T 2jkh_A 183 GDSGGPHVTRFKDTYFVTGIVSWGEG-CARKGKYGIYTKVTAFLKWIDRSMKT 234 (241)
T ss_dssp TTTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHTC-
T ss_pred CcCCCeeEEEECCEEEEEEEEEECCC-CCCCCCceEEEEhHHHHHHHHHHhcc
Confidence 9999999964 45 59999998743 22223345667777788888776543
No 98
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.30 E-value=2.9e-10 Score=106.84 Aligned_cols=173 Identities=16% Similarity=0.242 Sum_probs=104.7
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCCC---------cEEEEEEEEEcC-CCCeEEEEecCCC---CCCc
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (418)
...|+|.+|+++ +|||+|||+.+. ..+.|.+... +.+...-+..++ .+|||||+++.+. ..+.
T Consensus 41 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~ 119 (247)
T 1ddj_A 41 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 119 (247)
T ss_dssp CEEEEEEEEETT-EEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEeeCC-EEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEE
Confidence 357999999987 999999999764 3566766321 233444344444 5799999998763 2456
Q ss_pred ccccCCCC-CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeeccc---CCCCCcccEEEEc-----cccCCCCCCC
Q 014786 215 PIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-----AAINPGNSGG 281 (418)
Q Consensus 215 ~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~-----~~i~~G~SGG 281 (418)
|+.|.... .+..|+.+++.||..... .......+.-+....... ........++... ...+.|+|||
T Consensus 120 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 199 (247)
T 1ddj_A 120 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGG 199 (247)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcC
Confidence 66665432 356789999999874322 122222232222221111 0111223445442 3578999999
Q ss_pred ceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 282 PLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 282 Pl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||+.. +| .++||++++.. ++.....+...-+...++++++.++
T Consensus 200 PL~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 200 PLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEEEECSSSEEEEEEECGGGC-CBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred cEEEEECCcEEEEEEEEECCC-CCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 99853 33 59999998743 2222334556667777788777654
No 99
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.30 E-value=1.4e-10 Score=109.08 Aligned_cols=172 Identities=18% Similarity=0.185 Sum_probs=102.7
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|+|.+|+++ +|||+|||+.+. ...|.+.. .+.+..+-+..++ .+|||||+++.+. .
T Consensus 39 ~~~CgGtLI~~~-~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 116 (245)
T 1t8o_A 39 FHFCGGSLINEN-WVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 116 (245)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCC
Confidence 357999999987 999999999763 33454421 2334555444443 4599999998764 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeecccC-CCCCcccEEEE---ccccCCCCCC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQT---DAAINPGNSG 280 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~---~~~i~~G~SG 280 (418)
...++.|.... .+..|+.+++.||..... .......+.-+....+... .......++.. ....+.|+||
T Consensus 117 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~C~GDSG 196 (245)
T 1t8o_A 117 TVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSG 196 (245)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECSSCBCCTTCTT
T ss_pred ceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCceEEccCCCCccCcccCc
Confidence 45666665432 366899999999864321 1222222222221111100 00111233433 2357899999
Q ss_pred CceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 281 GPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 281 GPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|||+.. +| .++||++++... ......+....+...++++++.++
T Consensus 197 gPL~~~~~~~~~l~GI~S~g~~c-~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 197 GPLVCKKNGAWTLVGIVSWGSST-CSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp CEEEEEETTEEEEEEEEEECCTT-CCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred CCEEEEECCEEEEEEEEEeCCCC-CCCCCCEEEEEHHHHHHHHHHHHc
Confidence 999964 34 799999987532 222334556667777777776543
No 100
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.30 E-value=2.1e-11 Score=114.04 Aligned_cols=173 Identities=17% Similarity=0.191 Sum_probs=103.6
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC--cE---------EEEEEEEEcC-------C--CCeEEEEecCCC-
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--SA---------YDAKIVGFDQ-------D--KDVAVLRIDAPK- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg--~~---------~~a~vv~~d~-------~--~DlAlLkv~~~~- 210 (418)
..|+|.+|+++ +|||+|||+.+...+.|.+... .. +.++-+..++ . +|||||+++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~ 104 (240)
T 1fon_A 26 HTCGGSLIAPD-WVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ 104 (240)
T ss_dssp EEECCEEEETT-EEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC
T ss_pred eEEEEEEeeCC-EEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCccc
Confidence 47999999987 9999999998877777776321 11 1111122332 3 799999998764
Q ss_pred --CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccC--CC-CCcccEEEEc---cccCC
Q 014786 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINP 276 (418)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~~---~~i~~ 276 (418)
..+.++.|.... .+..|+.+++.||..... .......+.-+....+... .+ .....++... ...|.
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~ 184 (240)
T 1fon_A 105 LGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCN 184 (240)
T ss_dssp CTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTT
T ss_pred cCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccC
Confidence 245667775443 366789999999864321 1222222222221111110 01 1112344432 45789
Q ss_pred CCCCCceeCC--Cc--eEEEEEeeeeC-CCCCCCCccceeecccchhhhhhhhh
Q 014786 277 GNSGGPLLDS--SG--SLIGINTAIYS-PSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 277 G~SGGPl~n~--~G--~VVGI~s~~~~-~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
|+|||||+.. +| .++||+++... .++.....+....+....+++++.++
T Consensus 185 GDsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 185 GDSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp SCTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 9999999853 56 89999998642 22222344556677777777776554
No 101
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.29 E-value=1.8e-10 Score=107.12 Aligned_cols=172 Identities=16% Similarity=0.187 Sum_probs=102.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC----CeEEEEeCC----------CcEEEEEEEEEcCC-------CCeEEEEecCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAP 209 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~----~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~ 209 (418)
...|+|.+|+++ +|||+|||+.+. ..+.|.+.. ...+..+-+..+++ +|||||+++.+
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~ 101 (235)
T 4dgj_A 23 RLLCGASLVSSD-WLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFK 101 (235)
T ss_dssp EEEEEEEECSSS-EEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSC
T ss_pred CeEEEEEEeeCC-EEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCc
Confidence 357999999987 999999999643 346666531 12234444555543 59999999875
Q ss_pred C---CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCCCCCcccEEEEc-----cc
Q 014786 210 K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQTD-----AA 273 (418)
Q Consensus 210 ~---~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~~-----~~ 273 (418)
. ....++.|.... .+..|+.+++.||..... .......+.-+....+. +........++... ..
T Consensus 102 ~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~ 181 (235)
T 4dgj_A 102 VNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGID 181 (235)
T ss_dssp CCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCB
T ss_pred cccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCc
Confidence 3 235677775433 356899999999863211 12222222222221111 10001123445442 35
Q ss_pred cCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 274 INPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 274 i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
.|.|+|||||+.. +| .++||++++.. ++.....+....+...++++++.+
T Consensus 182 ~C~GDsGgPl~~~~~~~~~l~Gi~S~g~~-c~~~~~p~vyt~V~~~~~WI~~~i 234 (235)
T 4dgj_A 182 SCQGDSGGPLMCQENNRWFLAGVTSFGYE-CALPNRPGVYARVSRFTEWIQSFL 234 (235)
T ss_dssp CCTTCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGTHHHHHTTC
T ss_pred cCCCCCCCeEEEEECCcEEEEEEEEEcCC-CCCCCCCEEEeeHHHHHHHHHHHh
Confidence 7899999999964 34 39999998743 222233455666677777776643
No 102
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.27 E-value=1.5e-10 Score=108.81 Aligned_cols=172 Identities=17% Similarity=0.225 Sum_probs=101.3
Q ss_pred eEEEEEEEcCCcEEEecccccC--------CCCeEEEEeCCC----------cEEEEEEEEEcC--------CCCeEEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVLR 205 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~--------~~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlLk 205 (418)
..|+|.+|+++ +|||+|||+. ....+.|.+... +....+-+..++ .+|||||+
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~ 104 (259)
T 3rm2_H 26 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 104 (259)
T ss_dssp EEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred eEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEE
Confidence 47999999986 9999999994 234566766421 122244344433 34999999
Q ss_pred ecCCC---CCCcccccCCCCC----CCCCCEEEEEeCCCCCC-----------CceeEeEEeeeeeeecccCCC-CCccc
Q 014786 206 IDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAATG-RPIQD 266 (418)
Q Consensus 206 v~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g~~-----------~~~~~G~Vs~~~~~~~~~~~~-~~~~~ 266 (418)
++.+. ....|+.|..... +..|..+.+.||..... .......+.-+....+..... .....
T Consensus 105 L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 184 (259)
T 3rm2_H 105 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 184 (259)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred eCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCCc
Confidence 98754 2355666643221 35799999999874321 112222222222111111111 11234
Q ss_pred EEEEc--------cccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 267 VIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 267 ~i~~~--------~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
++... ...|.|+|||||+.. +| .++||++++.. ++.....+...-+...++++++.++
T Consensus 185 ~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 185 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 255 (259)
T ss_dssp EEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred eEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHH
Confidence 45442 267899999999853 23 69999998743 2222334566677777787777654
No 103
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.26 E-value=2.8e-11 Score=109.65 Aligned_cols=160 Identities=16% Similarity=0.113 Sum_probs=101.1
Q ss_pred CceEEEEeeecccCccccccccCCCeEEEEEEEcCCc--EEEecccccCCCCeEEEEeCCCcEEE-----EEEEEEcCCC
Q 014786 127 PSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKG--HVVTNYHVIRGASDIRVTFADQSAYD-----AKIVGFDQDK 199 (418)
Q Consensus 127 ~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G--~ILT~aHvv~~~~~i~V~~~dg~~~~-----a~vv~~d~~~ 199 (418)
.+||.|...+ +-.|.|+.|..+| ++|||+||+.+.........+++.++ ......|+..
T Consensus 16 ~svv~l~~~d--------------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k~g~~ip~~~~~~~~~~~d~~~ 81 (191)
T 1zyo_A 16 ASLVAIKSGP--------------TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKML 81 (191)
T ss_dssp SSEEEEEETT--------------EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEETTEEEECCSCEEEEEECCTTT
T ss_pred CeEEEEEeCC--------------eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecCCCCEEEcccceeeEccCCCCC
Confidence 4588887621 3378888886544 89999999987532122233554433 4444557789
Q ss_pred CeEEEEecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCC
Q 014786 200 DVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (418)
Q Consensus 200 DlAlLkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~ 276 (418)
|+||+++.... .....+.+. ....++.|.++|++.........|+.. .. .....+++++...+
T Consensus 82 D~all~vp~~~~s~lg~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~----~~-------~~~~~~~~~~~T~~ 147 (191)
T 1zyo_A 82 DFAIVRVPTHVWSKLGVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSS----TS-------EFTWKLTHTCPTAA 147 (191)
T ss_dssp CEEEEECCHHHHHHHTCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEE----EC-------SSTTEEEECCCCCT
T ss_pred cEEEEEcCCChhhhcCcceeEee---cCCCCccEEEEeecCCCCEeeccccee----ec-------cCCcEEEEEcCCCC
Confidence 99999997532 123344442 234689999999876444323333211 10 11356889999999
Q ss_pred CCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhh
Q 014786 277 GNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGI 319 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~ 319 (418)
|.||+|+||.+ .||||+..... ....+.++-+..++.+
T Consensus 148 G~SGsP~~ng~-~IVGvh~G~~~----~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 148 GWSGTPLYSSR-GVVGMHVGFEE----IGKLNRGVNMFYVANY 185 (191)
T ss_dssp TCTTCEEECSS-CEEEEEEEEEE----TTTEEEEECHHHHHHH
T ss_pred CCCCCcEEcCC-eEEEEEeCccc----CCceeeeeehHHHhhh
Confidence 99999999975 78999987532 2346667666666554
No 104
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.26 E-value=1.1e-10 Score=109.14 Aligned_cols=170 Identities=17% Similarity=0.207 Sum_probs=101.6
Q ss_pred eEEEEEEEcCCcEEEecccccCC-------CCeEEEEeCCC--------cEEEEEEEEEcC----------CCCeEEEEe
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQ--------SAYDAKIVGFDQ----------DKDVAVLRI 206 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~-------~~~i~V~~~dg--------~~~~a~vv~~d~----------~~DlAlLkv 206 (418)
..|+|.+|+++ +|||+|||+.+ ...+.|.+... ..+..+-+..++ .+|||||++
T Consensus 22 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 100 (242)
T 2qy0_B 22 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 100 (242)
T ss_dssp SEEEEEEETTT-EEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEE
T ss_pred CCEEEEEEeCC-EEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEE
Confidence 46999999987 99999999963 23456666432 123444444443 349999999
Q ss_pred cCCC---CCCcccccCCCCC-CCCCCEEEEEeCCCCCC---CceeEeEEeeeeeeeccc--C----CCCCcccEEEEc--
Q 014786 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA--A----TGRPIQDVIQTD-- 271 (418)
Q Consensus 207 ~~~~---~~~~~~~l~~~~~-~~~G~~V~~vG~p~g~~---~~~~~G~Vs~~~~~~~~~--~----~~~~~~~~i~~~-- 271 (418)
+.+. ..+.|+.|..... +..|+.+++.||..... .......+.-+....+.. . .......++...
T Consensus 101 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 180 (242)
T 2qy0_B 101 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 180 (242)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCC
Confidence 8764 2456777754432 46799999999864332 122222232222111110 0 001123445442
Q ss_pred ---cccCCCCCCCceeCCC---c--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 ---AAINPGNSGGPLLDSS---G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~~---G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...|.|+|||||+..+ + .++||++++.. ++. +.+...-+....+++++.++
T Consensus 181 ~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~-C~~--~~~vyt~V~~y~~WI~~~~~ 239 (242)
T 2qy0_B 181 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CSR--GYGFYTKVLNYVDWIKKEME 239 (242)
T ss_dssp TCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSS--SCEEEEEGGGGHHHHHHHTT
T ss_pred CCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCC-cCC--CCcEEEEHHHHHHHHHHHhh
Confidence 3578999999998532 2 59999998753 221 34566777777777777554
No 105
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.26 E-value=8.3e-10 Score=106.52 Aligned_cols=173 Identities=17% Similarity=0.200 Sum_probs=104.2
Q ss_pred eEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC--------------CcEEEEEEEEEcC-------CCCeEEEEec
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD--------------QSAYDAKIVGFDQ-------DKDVAVLRID 207 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d--------------g~~~~a~vv~~d~-------~~DlAlLkv~ 207 (418)
..|.|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++
T Consensus 30 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~ 108 (290)
T 1fiw_A 30 HVCGGSLLNSQ-WLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKIT 108 (290)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEE
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 47999999987 999999999754 346666532 1234444444443 3599999998
Q ss_pred CCC---CCCcccccCCCC--CCCCCCEEEEEeCCCCCC------CceeEeEEeeeeeeeccc---CCCCCcccEEEEc--
Q 014786 208 APK---DKLRPIPIGVSA--DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-- 271 (418)
Q Consensus 208 ~~~---~~~~~~~l~~~~--~~~~G~~V~~vG~p~g~~------~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~-- 271 (418)
.+. ..+.++.|.... ....|+.+++.||..... .......+.-+....+.. ........++...
T Consensus 109 ~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~ 188 (290)
T 1fiw_A 109 PPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYP 188 (290)
T ss_dssp SCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECT
T ss_pred CccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecC
Confidence 754 235666665332 245689999999874321 123333333222222211 1111223445442
Q ss_pred ---cccCCCCCCCceeCCC---c--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 272 ---AAINPGNSGGPLLDSS---G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~~---G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
...|.|+|||||+..+ | .++||++++.. ++....-+...-+...++++++.++.
T Consensus 189 ~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~~ 250 (290)
T 1fiw_A 189 EGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVG-CARAKRPGVYTSTWSYLNWIASKIGS 250 (290)
T ss_dssp TCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSS-SSBTTBCEEEEESGGGHHHHHHHHCH
T ss_pred CCCCeeCCCCCchheEEEECCCCCEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHhCc
Confidence 3578999999999532 3 59999998743 22222345556677777888776543
No 106
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.25 E-value=2.3e-10 Score=107.83 Aligned_cols=174 Identities=17% Similarity=0.179 Sum_probs=105.5
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCC---eEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (418)
...|+|.+|+++ ||||+|||+.+.. .+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (254)
T 2bz6_H 23 AQLCGGTLINTI-WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVV 101 (254)
T ss_dssp EEEEEEEECSSS-EEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCC
T ss_pred CcEEEEEEecCC-EEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCccc
Confidence 347999999986 9999999998754 37777642 2334454444443 3599999998753
Q ss_pred --CCCcccccCCCC----CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecc--cCC----CCCcccEEEEc--
Q 014786 211 --DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AAT----GRPIQDVIQTD-- 271 (418)
Q Consensus 211 --~~~~~~~l~~~~----~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~----~~~~~~~i~~~-- 271 (418)
..+.++.|.... .+..|+.+++.||..... .......+.-+....+. +.. ......++...
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 181 (254)
T 2bz6_H 102 LTDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYS 181 (254)
T ss_dssp CBTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCS
T ss_pred cCCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCC
Confidence 245666664322 245689999999864321 12222222222211111 000 01123445442
Q ss_pred ---cccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 272 ---~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
...|.|+|||||+.. +| .++||++++.. ++.....+....+...++++++.++.
T Consensus 182 ~~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~~~ 241 (254)
T 2bz6_H 182 DGSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQG-CATVGHFGVYTRVSQYIEWLQKLMRS 241 (254)
T ss_dssp SSSCBCCGGGTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHHTS
T ss_pred CCCCccccccCCCceEEeECCEEEEEEEEEECCC-CCCCCCCeEEEEHHHHHHHHHHHHhc
Confidence 357899999999964 45 59999998743 22223345667777788888776653
No 107
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.25 E-value=2e-10 Score=107.65 Aligned_cols=172 Identities=15% Similarity=0.188 Sum_probs=103.3
Q ss_pred eEEEEEEEcCCcEEEecccccCC----CCeEEEEeCC------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
..|+|.+|+++ +|||+|||+.. ...+.|.+.+ ++.+..+-+..++ .+|||||+++.+. .
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 105 (245)
T 2f9n_A 27 HFCGGSLIHPQ-WVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISS 105 (245)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCC
Confidence 47999999987 99999999953 2457777643 2334455455554 3599999998763 2
Q ss_pred CCcccccCCC-CCCCCCCEEEEEeCCCCCCC-------ceeEeEEeeeeeeecc--cCC--------CCCcccEEEE---
Q 014786 212 KLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH-------TLTTGVISGLRREISS--AAT--------GRPIQDVIQT--- 270 (418)
Q Consensus 212 ~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~~-------~~~~G~Vs~~~~~~~~--~~~--------~~~~~~~i~~--- 270 (418)
.+.++.|... ..+..|+.++++||...... ......+.-+....+. +.. ......++..
T Consensus 106 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~ 185 (245)
T 2f9n_A 106 RVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNS 185 (245)
T ss_dssp SSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCS
T ss_pred CccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecCC
Confidence 4566666543 24668999999998643211 1222222111111110 000 0111234443
Q ss_pred ccccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 271 DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 271 ~~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
....|.|+|||||+.. +| .++||++++.. ++.....+...-+...++++++.++
T Consensus 186 ~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~-C~~~~~p~vyt~V~~y~~WI~~~~~ 242 (245)
T 2f9n_A 186 QRDSCQGDSGGPLVCKVNGTWLQAGVVSWGEG-CAQPNRPGIYTRVTYYLDWIHHYVP 242 (245)
T ss_dssp SSBCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHHHHHHSC
T ss_pred CCCcCCCCCCCceEEEECCEEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 2357899999999964 56 59999998743 2222334556667777777776543
No 108
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.25 E-value=1.1e-10 Score=108.71 Aligned_cols=171 Identities=19% Similarity=0.183 Sum_probs=102.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC---------CCCeEEEEecCCC---
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (418)
..|+|.+|+++ +|||+|||+.+...+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 24 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~ 102 (235)
T 2wph_S 24 AFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLN 102 (235)
T ss_dssp TCEEEEEEETT-EEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCCB
T ss_pred eeEEEEEEeCC-EEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcCC
Confidence 47999999987 999999999887777777642 1234444444432 3599999998764
Q ss_pred CCCcccccCCCCC---CCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccCC-CCCcccEEEEc-----cccCC
Q 014786 211 DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINP 276 (418)
Q Consensus 211 ~~~~~~~l~~~~~---~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~~-----~~i~~ 276 (418)
....|+.|..... +..++.+++.||..... .......+.-+....+.... ......++... ...|.
T Consensus 103 ~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (235)
T 2wph_S 103 SYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQ 182 (235)
T ss_dssp TTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCCT
T ss_pred CCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccCC
Confidence 2355666643221 23578899999864321 12222222222221111111 11123445442 35789
Q ss_pred CCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 277 GNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 277 G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
|+|||||+.. +| .++||++++.. ++.....+....+...++++++.+
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~~-C~~~~~p~vyt~V~~~~~WI~~~~ 232 (235)
T 2wph_S 183 GDSGGPHVTEVEGTSFLTGIISWGEE-CAMKGKYGIYTKVSRYVNWIKEKT 232 (235)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSS-SSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCCCCceEEeECCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHH
Confidence 9999999953 45 59999998743 222333456667777777777654
No 109
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.23 E-value=6.8e-10 Score=110.98 Aligned_cols=173 Identities=16% Similarity=0.195 Sum_probs=105.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCC----CCeEEEEeCC-------CcEEEEEEEEEcC-------------CCCeEEEEe
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-------QSAYDAKIVGFDQ-------------DKDVAVLRI 206 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d-------g~~~~a~vv~~d~-------------~~DlAlLkv 206 (418)
...+.|.+|+++ ||||+|||+.+ ...+.|.+.. +..+.++-+..++ .+|||||++
T Consensus 140 ~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL 218 (372)
T 1z8g_A 140 AHLCGGSLLSGD-WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218 (372)
T ss_dssp EEEEEEEESSSS-EEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEE
T ss_pred ceEEEEEEecCC-EEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEE
Confidence 357999999987 99999999942 2456776642 2244555444443 349999999
Q ss_pred cCCC---CCCcccccCCC-CCCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeeccc---CCCCCcccEEEEc---
Q 014786 207 DAPK---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD--- 271 (418)
Q Consensus 207 ~~~~---~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~--- 271 (418)
+.+. ..+.|+.|... ..+..|+.+++.||..... .......+.-+....... ........++...
T Consensus 219 ~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~ 298 (372)
T 1z8g_A 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPE 298 (372)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTT
T ss_pred CCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCC
Confidence 8753 24567777543 2456799999999864321 122333332222221111 1111223455542
Q ss_pred --cccCCCCCCCceeCCC-----c--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 --AAINPGNSGGPLLDSS-----G--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 --~~i~~G~SGGPl~n~~-----G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...+.|+|||||+..+ | .++||++++.. .+.....+...-+....+++++.++
T Consensus 299 ~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 360 (372)
T 1z8g_A 299 GGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTG-CALAQKPGVYTKVSDFREWIFQAIK 360 (372)
T ss_dssp CSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSS-SSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 3578999999999542 3 69999998753 2222334566777777788777654
No 110
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.22 E-value=1.2e-11 Score=102.49 Aligned_cols=77 Identities=25% Similarity=0.438 Sum_probs=61.7
Q ss_pred ccccccccCeeecc--chhhhhhCc---------cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC
Q 014786 327 GKVTRPILGIKFAP--DQSVEQLGV---------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 395 (418)
Q Consensus 327 g~v~~~~lGv~~~~--~~~~~~~~~---------~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~ 395 (418)
|++.|+|||+.+++ ...++.+++ .|++|.+|.++|||+++||++ ||+|++|||++|.+
T Consensus 1 G~v~r~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (113)
T 2pzd_A 1 GSHMRRYIGVMMLTLSPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRP-----------GDVILAIGEQMVQN 69 (113)
T ss_dssp ----CEECCEEEEECCHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CcccccEeEEEEEeCCHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCC
Confidence 57889999999886 333445543 799999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEE
Q 014786 396 GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 396 ~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
..++.+++.. |+.+.++|.
T Consensus 70 ~~~~~~~l~~---~~~v~l~v~ 88 (113)
T 2pzd_A 70 AEDVYEAVRT---QSQLAVQIR 88 (113)
T ss_dssp HHHHHHHHHH---CSSEEEEEE
T ss_pred HHHHHHHHhC---CCeEEEEEE
Confidence 9999999875 566777653
No 111
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.20 E-value=5.2e-10 Score=107.72 Aligned_cols=173 Identities=17% Similarity=0.214 Sum_probs=102.8
Q ss_pred CeEEEEEEEcCCcEEEecccccCC--------CCeEEEEeCCC----------cEEEEEEEEEcC--------CCCeEEE
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG--------ASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVL 204 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~--------~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlL 204 (418)
...|.|.+|+++ ||||+|||+.+ ...+.|++... +.+.++-+..++ .+|||||
T Consensus 55 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl 133 (289)
T 2bdy_A 55 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 133 (289)
T ss_dssp EEEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEE
T ss_pred CEEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEE
Confidence 357999999986 99999999942 34577776421 223344344432 3599999
Q ss_pred EecCCC---CCCcccccCCCCC----CCCCCEEEEEeCCCCCC-----------CceeEeEEeeeeeeecccCC-CCCcc
Q 014786 205 RIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAAT-GRPIQ 265 (418)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g~~-----------~~~~~G~Vs~~~~~~~~~~~-~~~~~ 265 (418)
+++.+. ..+.|+.|..... +..|..+++.||..... .......+.-+....+.... .....
T Consensus 134 ~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~~ 213 (289)
T 2bdy_A 134 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 213 (289)
T ss_dssp EESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCCC
Confidence 998764 2356666654321 46799999999864221 11222222211111111111 11123
Q ss_pred cEEEEc--------cccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 266 DVIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 266 ~~i~~~--------~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
.++... ...|.|+|||||+.. +| .++||++++.. ++.....+...-+...++++++.++
T Consensus 214 ~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~-C~~~~~p~vyt~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 214 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 285 (289)
T ss_dssp TEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSS-SSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred CEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 455542 357899999999853 34 59999998743 2222334566777777888877554
No 112
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.20 E-value=2.5e-10 Score=113.11 Aligned_cols=172 Identities=13% Similarity=0.149 Sum_probs=105.7
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCC-----------eEEEEeCCCcEEEEEEEEEcCC---CCeEEEEecCCC---CCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGAS-----------DIRVTFADQSAYDAKIVGFDQD---KDVAVLRIDAPK---DKL 213 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~-----------~i~V~~~dg~~~~a~vv~~d~~---~DlAlLkv~~~~---~~~ 213 (418)
...+.|.+|+++ ||||||||+.... ...+...+.+.+..+-+..+++ +|||||+++.+. ..+
T Consensus 125 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~v 203 (347)
T 4f4o_C 125 NLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNERV 203 (347)
T ss_dssp CCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCTTTCCCEEEEESSCCCCSSSC
T ss_pred CEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCCCCCCEEEEEECCCccCCCce
Confidence 457999999986 9999999996422 2344445556666666667664 599999998753 356
Q ss_pred cccccCCCCCCCCCCEEEEEeCCCCCCC----ceeEeEEeeeeeeecc--cC----------------CCCCcccEEEE-
Q 014786 214 RPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISS--AA----------------TGRPIQDVIQT- 270 (418)
Q Consensus 214 ~~~~l~~~~~~~~G~~V~~vG~p~g~~~----~~~~G~Vs~~~~~~~~--~~----------------~~~~~~~~i~~- 270 (418)
.|+.|...+....|...++.||...... ......+.-+...... +. .......++..
T Consensus 204 ~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCAG 283 (347)
T 4f4o_C 204 MPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCAG 283 (347)
T ss_dssp CCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEEC
T ss_pred eeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEec
Confidence 7777766666788999999998643221 2222222222211110 00 00011234443
Q ss_pred ----ccccCCCCCCCceeC---CCce--EEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 271 ----DAAINPGNSGGPLLD---SSGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 271 ----~~~i~~G~SGGPl~n---~~G~--VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
....+.|+|||||+- .+|+ ++||+|++..- + ....+...-+....+++++.+.
T Consensus 284 ~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C-~-~~~pgVYTrVs~y~~WI~~~i~ 345 (347)
T 4f4o_C 284 LSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSC-R-TAEYGVYVRVTSILDWIQTTIA 345 (347)
T ss_dssp CCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCT-T-TSSCEEEEEHHHHHHHHHHHHT
T ss_pred CCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCC-C-CCCCeEEEEHHHHHHHHHHHHH
Confidence 234688999999973 2443 99999987432 2 2234555566666777776554
No 113
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.20 E-value=1.9e-10 Score=110.56 Aligned_cols=186 Identities=16% Similarity=0.082 Sum_probs=111.6
Q ss_pred cCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC------CcEEEEEEEEEcC-
Q 014786 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQ- 197 (418)
Q Consensus 125 ~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~~~~a~vv~~d~- 197 (418)
--|-.|.|... .....++|.+|+++ ||||+|||+.+...+.|.+.. ++.+.++-+..++
T Consensus 63 ~~Pw~v~l~~~-------------~~~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~ 128 (283)
T 3f1s_B 63 DLPWQVKLTNS-------------EGKDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMR 128 (283)
T ss_dssp CCTTEEEEECT-------------TSCEEEEEEEEETT-EEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTT
T ss_pred ccCCEEEEEec-------------CCCeeeccEEecCC-EEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCC
Confidence 35667777531 12457999999987 999999999888788888752 3345555555554
Q ss_pred ------CCCeEEEEecCCC---CCCcccccCCCC----CCCCCCEEEEEeCCCCCC---CceeEeEEeeeeeeeccc-CC
Q 014786 198 ------DKDVAVLRIDAPK---DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-AT 260 (418)
Q Consensus 198 ------~~DlAlLkv~~~~---~~~~~~~l~~~~----~~~~G~~V~~vG~p~g~~---~~~~~G~Vs~~~~~~~~~-~~ 260 (418)
.+|||||+++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....... ..
T Consensus 129 y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~ 208 (283)
T 3f1s_B 129 YDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLN 208 (283)
T ss_dssp CBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHT
T ss_pred CCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhc
Confidence 4599999998754 245667675432 357799999999864111 112222222111111110 00
Q ss_pred CCCcccEEEEc--cccCCCCCCCceeCC-Cce--EEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 261 GRPIQDVIQTD--AAINPGNSGGPLLDS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 261 ~~~~~~~i~~~--~~i~~G~SGGPl~n~-~G~--VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
......++... .....|+|||||+.. +|+ ++||+++.. .......+...-+....+++++.++.
T Consensus 209 ~~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~--c~~~~~p~vyt~V~~y~~WI~~~~~~ 277 (283)
T 3f1s_B 209 VTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIMNA 277 (283)
T ss_dssp SCCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCS--GGGCSSEEEEEEGGGGHHHHHHHHTC
T ss_pred CCCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCC--CCCCCcceEEEEhHHhHHHHHHHhhc
Confidence 11122344332 223468999999963 555 999998742 22223344666777777787776553
No 114
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.19 E-value=7.8e-10 Score=111.50 Aligned_cols=172 Identities=16% Similarity=0.175 Sum_probs=104.5
Q ss_pred EEEEEEEcCCcEEEecccccCC----CCeEEEEeCCC-------cEEEEEEEEEcC--------CCCeEEEEecCCC---
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK--- 210 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~--- 210 (418)
.+.|.+|+++ ||||+|||+.+ ...+.|++..- ..+.++-+..++ .+|||||+++.+.
T Consensus 184 ~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~ 262 (403)
T 1zjk_A 184 TAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVIN 262 (403)
T ss_dssp CEEEEEETTT-EEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCB
T ss_pred ceEEEEecCC-EEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCC
Confidence 5999999987 99999999965 45677776431 234444444442 4699999998764
Q ss_pred CCCcccccCCCCC---CCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecc--cCC-----CCCcccEEEEc-----
Q 014786 211 DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AAT-----GRPIQDVIQTD----- 271 (418)
Q Consensus 211 ~~~~~~~l~~~~~---~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~--~~~-----~~~~~~~i~~~----- 271 (418)
..+.|+.|..... +..|+.+++.||..... .......+.-+...... +.. ......++...
T Consensus 263 ~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~ 342 (403)
T 1zjk_A 263 SNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGG 342 (403)
T ss_dssp TTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCC
T ss_pred CceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCC
Confidence 3466777754332 56799999999875322 12222233222221111 100 01223455442
Q ss_pred cccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 272 AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 272 ~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
...+.|+|||||+-. +| .++||++++....+.....+...-+....+++++.++
T Consensus 343 ~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 401 (403)
T 1zjk_A 343 KDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 401 (403)
T ss_dssp TTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHHT
T ss_pred CCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 457899999999853 34 5999999873333322334666777777777776553
No 115
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.16 E-value=2.9e-09 Score=101.25 Aligned_cols=189 Identities=16% Similarity=0.174 Sum_probs=106.6
Q ss_pred CCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEE
Q 014786 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIV 193 (418)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv 193 (418)
-|-.|.|........ ....|.|.||+++ ||||+|||+.+. ..+.|.... +..+..+.+
T Consensus 35 ~Pw~v~l~~~~~~~~---------~~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 35 QPWFAAIYRRHRGGS---------VTYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp STTEEEEEEECSSSC---------EEEEEEEEEEETT-EEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCcEEEEEEecCCCc---------ceeEEEEEEeeCC-EEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 466777765322211 1247999999987 999999999753 335555421 234555545
Q ss_pred EEcC---------CCCeEEEEecCCC-------CCCcccccCCC-CCCCCCCEEEEEeCCCCCCC------ceeEeEEee
Q 014786 194 GFDQ---------DKDVAVLRIDAPK-------DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH------TLTTGVISG 250 (418)
Q Consensus 194 ~~d~---------~~DlAlLkv~~~~-------~~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~~------~~~~G~Vs~ 250 (418)
..++ ..|||||+++.+. ....++.|... ..+..|+.+.+.||.+.... ......+.-
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i 184 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeE
Confidence 4443 3599999997532 23455655432 34677899999998754221 111112211
Q ss_pred eeeeecccC---CCCCcccEEEE-----ccccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhh
Q 014786 251 LRREISSAA---TGRPIQDVIQT-----DAAINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGI 319 (418)
Q Consensus 251 ~~~~~~~~~---~~~~~~~~i~~-----~~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~ 319 (418)
+........ ........+.. ....|.|+|||||+-. +| .++||+|++.. ++....-+...-+...+++
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyt~V~~y~~W 263 (276)
T 2vnt_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRG-CALKDKPGVYTRVSHFLPW 263 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSS-SSBTTBCEEEEEGGGGHHH
T ss_pred ecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCC-CCCCCCCEEEEEHHHHHHH
Confidence 111111110 01111122322 2346889999999853 34 49999998743 2222233455666777777
Q ss_pred hhhhhh
Q 014786 320 VDQLVK 325 (418)
Q Consensus 320 l~~l~~ 325 (418)
+++.++
T Consensus 264 I~~~~~ 269 (276)
T 2vnt_A 264 IRSHTK 269 (276)
T ss_dssp HHHHHS
T ss_pred HHHHhh
Confidence 777654
No 116
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.16 E-value=3e-11 Score=100.00 Aligned_cols=77 Identities=27% Similarity=0.488 Sum_probs=64.1
Q ss_pred ccccccccCeeecc--chhhhhhC---------ccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC
Q 014786 327 GKVTRPILGIKFAP--DQSVEQLG---------VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN 395 (418)
Q Consensus 327 g~v~~~~lGv~~~~--~~~~~~~~---------~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~ 395 (418)
|++.|+|||+.+++ ...++.++ ..|++|.+|.+++||+++||++ ||+|++|||++|.+
T Consensus 1 G~v~~~~lGi~~~~l~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~ 69 (112)
T 2p3w_A 1 GSHMKRFIGIRMRTITPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQD-----------GDIIVKVNGRPLVD 69 (112)
T ss_dssp CCCCEEECCEEEEECCHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCS
T ss_pred CCcccceeeEEEecCCHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCC
Confidence 57889999999886 23344443 2699999999999999999999 99999999999999
Q ss_pred HHHHHHHHhcCCCCCEEEEEEE
Q 014786 396 GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 396 ~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+.++.+++. +|++++++|.
T Consensus 70 ~~~~~~~l~---~g~~v~l~v~ 88 (112)
T 2p3w_A 70 SSELQEAVL---TESPLLLEVR 88 (112)
T ss_dssp HHHHHHHHH---HCSSEEEEEE
T ss_pred HHHHHHHHh---CCCeEEEEEE
Confidence 999999884 4677777653
No 117
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.15 E-value=5.9e-10 Score=112.31 Aligned_cols=175 Identities=18% Similarity=0.191 Sum_probs=106.8
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC----CeEEEEeCCC-----------cEEEEEEEEEcC-------CCCeEEEEecC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFADQ-----------SAYDAKIVGFDQ-------DKDVAVLRIDA 208 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~----~~i~V~~~dg-----------~~~~a~vv~~d~-------~~DlAlLkv~~ 208 (418)
...|.|.+|+++ ||||+|||+.+. ..+.|++..- ..+.++-+..++ .+|||||+++.
T Consensus 161 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~ 239 (394)
T 2b9l_A 161 QLVCGGSLIAPS-VVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDR 239 (394)
T ss_dssp SEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred ceEeeEEEEeCC-EEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecC
Confidence 457999999987 999999999753 4577877431 234455445554 35999999987
Q ss_pred CC---CCCcccccCCCCCCCCCCEEEEEeCCCCCC-------CceeEeEEeeeeeeecc--cC---CC---CCcccEEEE
Q 014786 209 PK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISS--AA---TG---RPIQDVIQT 270 (418)
Q Consensus 209 ~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~-------~~~~~G~Vs~~~~~~~~--~~---~~---~~~~~~i~~ 270 (418)
+. ..+.++.|........++.+++.||..... .......+.-+...... +. .+ .....++..
T Consensus 240 pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCA 319 (394)
T 2b9l_A 240 PLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCA 319 (394)
T ss_dssp CCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEE
T ss_pred ccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEe
Confidence 53 346677776544445678899999864321 12222233222221111 00 00 111234443
Q ss_pred c----cccCCCCCCCceeCC----Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhcc
Q 014786 271 D----AAINPGNSGGPLLDS----SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKFG 327 (418)
Q Consensus 271 ~----~~i~~G~SGGPl~n~----~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~g 327 (418)
. ...+.|+|||||+-. +| .++||++++.. .+....-+...-+...++++++.++..
T Consensus 320 g~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYT~V~~y~~WI~~~i~~~ 385 (394)
T 2b9l_A 320 GGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIG-CGDENVPGVYANVAHFRNWIDQEMQAK 385 (394)
T ss_dssp CCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTC-CCBSSSCEEEEEGGGGHHHHHHHHHHT
T ss_pred eCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCC-CCCCCCCeEEEEHHHhHHHHHHHHHhc
Confidence 2 457899999999852 24 59999998753 332233456667777788887766543
No 118
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.15 E-value=3e-10 Score=105.23 Aligned_cols=137 Identities=18% Similarity=0.192 Sum_probs=80.4
Q ss_pred eEEEEEEEc---CCcEEEecccccCCC------CeEEEEeC--CC----cEEEEEEEEEc--------CCCCeEEEEecC
Q 014786 152 GSGSGFVWD---SKGHVVTNYHVIRGA------SDIRVTFA--DQ----SAYDAKIVGFD--------QDKDVAVLRIDA 208 (418)
Q Consensus 152 ~~GSGfiI~---~~G~ILT~aHvv~~~------~~i~V~~~--dg----~~~~a~vv~~d--------~~~DlAlLkv~~ 208 (418)
..|+|.+|+ ++ +|||||||+.+. ..+.+... +. ..+.++-+..+ ..+||||||++.
T Consensus 21 ~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~~ 99 (218)
T 3cp7_A 21 FVCSANIVASANQS-TVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLET 99 (218)
T ss_dssp EEEEEEEBCCTTSC-EEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEECC
T ss_pred eEEEEEEEecCCCC-EEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEeC
Confidence 479999998 76 999999999653 24555542 11 13444433332 356999999988
Q ss_pred C--C---CCCc-ccccCCCCCCCCCCEEEEEeCCCCCC--C-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCC
Q 014786 209 P--K---DKLR-PIPIGVSADLLVGQKVYAIGNPFGLD--H-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (418)
Q Consensus 209 ~--~---~~~~-~~~l~~~~~~~~G~~V~~vG~p~g~~--~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 279 (418)
+ . +... ++.+... ...|+.+.+.||+.... . ..... ........ .. ...+...|+.+.|+|
T Consensus 100 ~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~l~~C----~~~~~~~~-~~---~~~~~~~Ca~~~GDS 169 (218)
T 3cp7_A 100 KGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQELHSC----HGTATNDP-MG---SSTQGIPCNMTGGSS 169 (218)
T ss_dssp BTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSSCEEE----EEECEECT-TS---SSCEEEECCCCTTCT
T ss_pred CCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCceeeEe----eeeEEcCC-CC---CceEEecCCCCCCCc
Confidence 6 1 1122 4555432 24689999999986432 1 11100 00000000 00 111122344568999
Q ss_pred CCceeCC---CceEEEEEeeeeC
Q 014786 280 GGPLLDS---SGSLIGINTAIYS 299 (418)
Q Consensus 280 GGPl~n~---~G~VVGI~s~~~~ 299 (418)
||||+.. .++++||+|++..
T Consensus 170 GGPlv~~~~g~~~lvGIvS~G~g 192 (218)
T 3cp7_A 170 GGPWFLGNGTGGAQNSTNSYGYT 192 (218)
T ss_dssp TCEEEESSSSSSCEEEECCEEET
T ss_pred CCeeEEccCCCeEEEEEEccccC
Confidence 9999964 3789999998753
No 119
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.14 E-value=8.6e-10 Score=107.56 Aligned_cols=171 Identities=15% Similarity=0.072 Sum_probs=103.0
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC------CcEEEEEEEEEcC-------CCCeEEEEecCCC---CCCc
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLR 214 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~ 214 (418)
...++|.+|+++ ||||+|||+.+...+.|++.. +..+.++-+..++ .+|||||+++.+. ..+.
T Consensus 117 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~ 195 (317)
T 3h5c_B 117 KDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGL 195 (317)
T ss_dssp CEEEEEEEEETT-EEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCC
T ss_pred ceeeeeEEeeCC-EEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCcc
Confidence 457999999987 999999999877777887742 2345555555554 3599999998754 2456
Q ss_pred ccccCCCC----CCCCCCEEEEEeCCCCCC---CceeEeEEeeeeeeeccc-CCCCCcccEEEE--ccccCCCCCCCcee
Q 014786 215 PIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-ATGRPIQDVIQT--DAAINPGNSGGPLL 284 (418)
Q Consensus 215 ~~~l~~~~----~~~~G~~V~~vG~p~g~~---~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~~--~~~i~~G~SGGPl~ 284 (418)
|+.|.... .+..|+.+++.||..... .......+.-+....... ........++-. ......|+|||||+
T Consensus 196 picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDsGgPl~ 275 (317)
T 3h5c_B 196 PVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVT 275 (317)
T ss_dssp CCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEECSCCCCCCCTTCEEE
T ss_pred ceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECCCCCCCcCCCCCCCEE
Confidence 67675432 366799999999864211 112222222111111100 001111233333 22345789999999
Q ss_pred CC-Cce--EEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 285 DS-SGS--LIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 285 n~-~G~--VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
.. +|+ ++||+++.. .......+....+....+++++.+
T Consensus 276 ~~~~~~~~l~Gi~S~g~--~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 276 REHRGSWFLTGVLGSQP--VGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp EEETTEEEEEEEECCCC--SSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred EecCCEEEEEEEEEECC--CCCCCcceEEEEhHHhHHHHHHHh
Confidence 64 555 999998752 222223445566677777776643
No 120
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.12 E-value=1.8e-09 Score=106.05 Aligned_cols=169 Identities=17% Similarity=0.210 Sum_probs=99.3
Q ss_pred eEEEEEEEcCCcEEEecccccCC-------CCeEEEEeCCCc--------EEEEEEEEEcC----------CCCeEEEEe
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQS--------AYDAKIVGFDQ----------DKDVAVLRI 206 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~-------~~~i~V~~~dg~--------~~~a~vv~~d~----------~~DlAlLkv 206 (418)
..|.|.+|+++ ||||+|||+.. ...+.|.+.... .+..+-+..++ .+|||||++
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L 189 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEE
Confidence 36999999987 99999999973 234556664321 23334333332 359999999
Q ss_pred cCCC---CCCcccccCCCCC-CCCCCEEEEEeCCCCCC---CceeEeEEeeeeeeeccc--C----CCCCcccEEEE---
Q 014786 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA--A----TGRPIQDVIQT--- 270 (418)
Q Consensus 207 ~~~~---~~~~~~~l~~~~~-~~~G~~V~~vG~p~g~~---~~~~~G~Vs~~~~~~~~~--~----~~~~~~~~i~~--- 270 (418)
+.+. ..+.|+.|..... +..|..+++.||..... .......+.-+....... . .......++..
T Consensus 190 ~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~ 269 (329)
T 1md8_A 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 269 (329)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecC
Confidence 8764 2456777754432 46789999999864322 122222222222111110 0 00112244544
Q ss_pred --ccccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 271 --~~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
....+.|+|||||+-. ++ .++||++++.. ++ .+.+...-+....+++++.+
T Consensus 270 ~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~-C~--~~~gvyT~V~~y~~WI~~~i 327 (329)
T 1md8_A 270 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CS--RGYGFYTKVLNYVDWIKKEM 327 (329)
T ss_dssp TCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSS-SS--SSCEEEEEGGGTHHHHHHHH
T ss_pred CCCCcCCCCccccceEEEECCCCcEEEEEEEEECCC-cC--CCCcEEEEHHHHHHHHHHHH
Confidence 2357899999999852 33 49999998753 22 13456666777777776654
No 121
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.11 E-value=3.5e-10 Score=108.13 Aligned_cols=148 Identities=14% Similarity=0.126 Sum_probs=83.4
Q ss_pred HHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCC-----cEEEecccccCCC----CeEEEEeCCC--------
Q 014786 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSK-----GHVVTNYHVIRGA----SDIRVTFADQ-------- 185 (418)
Q Consensus 123 ~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~-----G~ILT~aHvv~~~----~~i~V~~~dg-------- 185 (418)
+..+++|++|... ....|+|++|+++ .||||||||+.+. ..++|.+..+
T Consensus 19 ~~~~~aV~rl~~~--------------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~ 84 (268)
T 1arb_A 19 RDIIRAVGAYSKS--------------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPN 84 (268)
T ss_dssp TTGGGGEEEEEET--------------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTT
T ss_pred HHhhceEEEEEeC--------------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCcccccc
Confidence 3567889998641 1357999999972 4999999999752 2455554210
Q ss_pred -------------cE-EEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCce--------
Q 014786 186 -------------SA-YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL-------- 243 (418)
Q Consensus 186 -------------~~-~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~~-------- 243 (418)
+. ....+.+....+||||||++.+. + .+..+++.||........
T Consensus 85 ~~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v---~-----------~~~~~~vsGWG~t~~~~~~~~~~~~~ 150 (268)
T 1arb_A 85 TPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA---N-----------PAFNLFWAGWDRRDQNYPGAIAIHHP 150 (268)
T ss_dssp SGGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC---C-----------GGGCCEEBCEECCSCCCSCEEEEECG
T ss_pred ccccccccCCcceEEeccceEecCCCCCceEEEEecCCC---C-----------CCCceEEeCcCccCCCCCcceeeccC
Confidence 11 22334445577899999998742 1 123345555532111100
Q ss_pred --eEeEEeeeeee--ecccCCCCCcccEEEEc-----cccCCCCCCCceeCCCceEEEEEeeeeC
Q 014786 244 --TTGVISGLRRE--ISSAATGRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYS 299 (418)
Q Consensus 244 --~~G~Vs~~~~~--~~~~~~~~~~~~~i~~~-----~~i~~G~SGGPl~n~~G~VVGI~s~~~~ 299 (418)
..-+++..... ...+ .......++... ...+.|+|||||++.+++++||++++..
T Consensus 151 ~~~l~~i~~~~~~~~~~~~-~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~~ 214 (268)
T 1arb_A 151 NVAEKRISNSTSPTSFVAW-GGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGPS 214 (268)
T ss_dssp GGCSCEEEEECSCCEEECT-TSSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECSC
T ss_pred CcccEEEEeeccccccccc-cccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecCc
Confidence 00011100000 0011 011112344432 2478999999999878899999998743
No 122
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.10 E-value=4.2e-09 Score=106.57 Aligned_cols=174 Identities=15% Similarity=0.159 Sum_probs=103.7
Q ss_pred eEEEEEEEcCCcEEEecccccCCC--CeEEEEeCCC---------------------cEEEEEEEEEcC-------CCCe
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ---------------------SAYDAKIVGFDQ-------DKDV 201 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg---------------------~~~~a~vv~~d~-------~~Dl 201 (418)
..+.|.+|+++ ||||+|||+.+. ..+.|++.+- ..+..+-+..++ .+||
T Consensus 146 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDI 224 (408)
T 2xxl_A 146 FLCGGAMISER-YILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224 (408)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCC
T ss_pred EEEEEEEEECC-EEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccce
Confidence 47999999987 999999999764 4577776421 123344344443 3599
Q ss_pred EEEEecCCC---CCCcccccCCCCC----CCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeeccc-CCCCCcccEEE
Q 014786 202 AVLRIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA-ATGRPIQDVIQ 269 (418)
Q Consensus 202 AlLkv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~-~~~~~~~~~i~ 269 (418)
|||+++.+. ..+.|+.|..... ...|+.+++.||..... .......+.-+....... ........++.
T Consensus 225 ALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~iC 304 (408)
T 2xxl_A 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAVPLSQLC 304 (408)
T ss_dssp EEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTSCCCTTEEE
T ss_pred EEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhcccCCCceEe
Confidence 999998754 2456777754322 56789999999864322 122222222222111110 00001113444
Q ss_pred Ec----cccCCCCCCCce------eCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 270 TD----AAINPGNSGGPL------LDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 270 ~~----~~i~~G~SGGPl------~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
.. ...+.|+||||| +.. +| .++||++++....+....-+...-+....+++++.++.
T Consensus 305 Ag~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVYTrVs~y~~WI~~~i~~ 374 (408)
T 2xxl_A 305 VGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLYTNVGEYVQWITDTMAS 374 (408)
T ss_dssp ECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEEEEGGGGHHHHHHHHHH
T ss_pred ecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHHhh
Confidence 32 356789999999 542 34 68999998743343333345666777778888776553
No 123
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.09 E-value=2.7e-09 Score=104.80 Aligned_cols=169 Identities=16% Similarity=0.155 Sum_probs=99.6
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCCC-------cEEEE---EEEEEc--------------CCCCeEEEEecC
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-------SAYDA---KIVGFD--------------QDKDVAVLRIDA 208 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-------~~~~a---~vv~~d--------------~~~DlAlLkv~~ 208 (418)
.|.|.+|+++ ||||+|||+.+.....|.+... ..+.. +-+..+ ..+|||||+++.
T Consensus 104 ~CgGsLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~ 182 (333)
T 1elv_A 104 WAGGALINEY-WVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 182 (333)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESS
T ss_pred ceeEEEecCC-EEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCC
Confidence 6999999987 9999999998765445554321 12222 333332 236999999987
Q ss_pred CC---CCCcccccCCCC---CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeecccCCC----------CCcccEE
Q 014786 209 PK---DKLRPIPIGVSA---DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----------RPIQDVI 268 (418)
Q Consensus 209 ~~---~~~~~~~l~~~~---~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~----------~~~~~~i 268 (418)
+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+.......... .....++
T Consensus 183 ~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 262 (333)
T 1elv_A 183 PVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMI 262 (333)
T ss_dssp CCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEE
T ss_pred CCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeE
Confidence 64 245666665432 245799999999864322 122222222222111110000 1112344
Q ss_pred EE----ccccCCCCCCCceeCC---Cc---eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhhc
Q 014786 269 QT----DAAINPGNSGGPLLDS---SG---SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVKF 326 (418)
Q Consensus 269 ~~----~~~i~~G~SGGPl~n~---~G---~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~~ 326 (418)
.. ....+.|+|||||+-. ++ .++||++++.. ++ . .+...-+....+++++.++.
T Consensus 263 Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~-C~-~--~~vyt~V~~y~~WI~~~~~~ 326 (333)
T 1elv_A 263 CAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQ-CG-T--YGLYTRVKNYVDWIMKTMQE 326 (333)
T ss_dssp EEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSS-TT-S--EEEEEEGGGGHHHHHHHHHH
T ss_pred CccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCC-CC-C--CcEEeEHHHHHHHHHHHHhc
Confidence 43 2357899999999853 23 49999998743 22 1 46666777777888776543
No 124
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=99.09 E-value=1.8e-10 Score=99.33 Aligned_cols=84 Identities=25% Similarity=0.354 Sum_probs=69.6
Q ss_pred hhhhcccccccccCeeeccc---h-hhhhhC----ccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEe
Q 014786 322 QLVKFGKVTRPILGIKFAPD---Q-SVEQLG----VSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (418)
Q Consensus 322 ~l~~~g~v~~~~lGv~~~~~---~-~~~~~~----~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v 393 (418)
++.+.+++.++++|+.+... + ..+.++ ..|++|.+|.+++||+++||++ ||+|++|||++|
T Consensus 28 ~l~~~~~~~~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v 96 (139)
T 2vz5_A 28 EIHKLRQGENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDM 96 (139)
T ss_dssp EEECEEETTEEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC
T ss_pred EEEEcCCCCcccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEEc
Confidence 45667888899999998531 1 112333 2799999999999999999999 999999999999
Q ss_pred C--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 394 S--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 394 ~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
. +..++.+++.. .+|++++|+|.
T Consensus 97 ~~~~~~~~~~~l~~-~~g~~v~l~v~ 121 (139)
T 2vz5_A 97 TMVTHDQARKRLTK-RSEEVVRLLVT 121 (139)
T ss_dssp TTCCHHHHHHHHCC-TTCSEEEEEEE
T ss_pred CCCCHHHHHHHHHh-CCCCEEEEEEE
Confidence 9 58999999987 68999999874
No 125
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=99.09 E-value=8.1e-11 Score=98.18 Aligned_cols=82 Identities=22% Similarity=0.276 Sum_probs=68.5
Q ss_pred hhhccccccccc----CeeeccchhhhhhCc-------cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCE
Q 014786 323 LVKFGKVTRPIL----GIKFAPDQSVEQLGV-------SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGK 391 (418)
Q Consensus 323 l~~~g~v~~~~l----Gv~~~~~~~~~~~~~-------~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~ 391 (418)
++++|++.|+|+ |+.+.... ..+|+ .|++|.+|.+++||+++||++ ||+|++|||+
T Consensus 6 ~~~~g~v~r~~l~~~~~v~l~~~~--~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~vng~ 72 (117)
T 1uit_A 6 SGGERRKDRPYVEEPRHVKVQKGS--EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEY-----------GDQLLEFNGI 72 (117)
T ss_dssp CCCCCCSCCCCSCCCEEEEEECSS--CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCT-----------TCEECEETTE
T ss_pred ccccCccccccCCCCEEEEEEeCC--CCccEEEEccCCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCE
Confidence 467889999999 88876532 22332 689999999999999999999 9999999999
Q ss_pred EeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 392 KVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 392 ~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+|.++.++...+...++|++++|+|.
T Consensus 73 ~v~~~~~~~~~~~~~~~g~~v~l~v~ 98 (117)
T 1uit_A 73 NLRSATEQQARLIIGQQCDTITILAQ 98 (117)
T ss_dssp ETTTCCHHHHHHHTTSCCSEEEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCeEEEEEE
Confidence 99999888887766678999999874
No 126
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.08 E-value=8.5e-11 Score=96.31 Aligned_cols=89 Identities=16% Similarity=0.148 Sum_probs=76.2
Q ss_pred ccchhhhhhhhhcccccccccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEe
Q 014786 314 DTVNGIVDQLVKFGKVTRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV 393 (418)
Q Consensus 314 ~~i~~~l~~l~~~g~v~~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v 393 (418)
+.++++.++++++++..+.|+|+...... ..+.|+.|....+.+||+++||++ ||+|++|||++|
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~g~~~~~~~----~~~~G~~V~~~~pas~A~~aGl~~-----------GDvI~~ing~~v 69 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEIFQYVRLSQVKRD----DKVLGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDL 69 (105)
T ss_dssp HHHHHHHHHHHHSGGGHHHHEEEEEEEET----TEEEEEEEEECSCTHHHHHHTCCT-----------TCEEEEETTEET
T ss_pred HHHHHHHHHHHHCHHHHHhhceeEEEecC----CcEEEEEEecCCCCCHHHHcCCCC-----------CCEEEEECCEEC
Confidence 56788899999999999999998764321 113688898888889999999999 999999999999
Q ss_pred CCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 394 SNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 394 ~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.++.|+.+++...++|++++++|.
T Consensus 70 ~~~~d~~~~~~~~~~g~~v~l~v~ 93 (105)
T 2i4s_A 70 TDPNVMNTLFQSMNEMTEMSLTVE 93 (105)
T ss_dssp TSTTHHHHHHHHHTTCSEEEEEEE
T ss_pred CCHHHHHHHHHhcCCCCeEEEEEE
Confidence 999999999987778999998874
No 127
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.05 E-value=1.1e-09 Score=111.38 Aligned_cols=173 Identities=16% Similarity=0.208 Sum_probs=102.8
Q ss_pred CeEEEEEEEcCCcEEEecccccC--------CCCeEEEEeCCC----------cEEEEEEEEEcC--------CCCeEEE
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVL 204 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~--------~~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlL 204 (418)
...|.|.||+++ ||||||||+. ....+.|++... +.+.++-+..++ .+|||||
T Consensus 190 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~~nDIALL 268 (424)
T 3nxp_A 190 ELLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALM 268 (424)
T ss_dssp EEEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEEEECTTCBTTTTSBTCCEEE
T ss_pred CccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEEEeCCCCCCCCCCcCCeEEE
Confidence 357999999986 9999999984 234577776421 123344344443 3599999
Q ss_pred EecCCC---CCCcccccCCCCC----CCCCCEEEEEeCCCC---------C--CCceeEeEEeeeeeeecccC-CCCCcc
Q 014786 205 RIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFG---------L--DHTLTTGVISGLRREISSAA-TGRPIQ 265 (418)
Q Consensus 205 kv~~~~---~~~~~~~l~~~~~----~~~G~~V~~vG~p~g---------~--~~~~~~G~Vs~~~~~~~~~~-~~~~~~ 265 (418)
+++.+. ..+.++.|..... +..|..+++.||... . ........+.-+........ ......
T Consensus 269 kL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~i~~ 348 (424)
T 3nxp_A 269 KLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITD 348 (424)
T ss_dssp EESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEEEEBCCHHHHHHTCSSCCCT
T ss_pred EecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEEeeEEcHHHhhhhccCcCCC
Confidence 998753 2456666643221 346899999998631 0 12223333322222111111 111223
Q ss_pred cEEEEc--------cccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 266 DVIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 266 ~~i~~~--------~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
.++... ...+.|+|||||+-. +| .++||++++.. ++.....+...-+....+++++.++
T Consensus 349 ~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~-C~~~~~pgVyT~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 349 NMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEG-CDRDGKYGFYTHVFRLKKWIQKVID 420 (424)
T ss_dssp TEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSC-TTTCCSCEEEEECTTCHHHHHHHHH
T ss_pred CeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCC-CCCCCCCEEEEEHHHHHHHHHHHHH
Confidence 455542 257899999999853 34 59999998743 3323345666777778888777554
No 128
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=99.05 E-value=1.7e-10 Score=91.43 Aligned_cols=69 Identities=16% Similarity=0.196 Sum_probs=60.4
Q ss_pred ccccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCC
Q 014786 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~ 408 (418)
.+++|+.+.... .|++|.+|.+++||+++||++ ||+|++|||++| .+..++.+++...++
T Consensus 16 ~~~lG~~~~~~~-------~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 77 (90)
T 2eaq_A 16 SLDFGFTIKWDI-------PGIFVASVEAGSPAEFSQLQV-----------DDEIIAINNTKFSYNDSKEWEEAMAKAQE 77 (90)
T ss_dssp SSCCSEEEEEET-------TEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECCTTCHHHHHHHHHHHHH
T ss_pred CCcccEEEEecC-------CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhcCC
Confidence 457888775432 689999999999999999999 999999999999 899999999987667
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+++.++|.
T Consensus 78 g~~v~l~v~ 86 (90)
T 2eaq_A 78 TGHLVMDVR 86 (90)
T ss_dssp HTEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999874
No 129
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.05 E-value=4.7e-09 Score=105.53 Aligned_cols=170 Identities=17% Similarity=0.203 Sum_probs=98.3
Q ss_pred eEEEEEEEcCCcEEEecccccCCC-------CeEEEEeCCC--------cEEEEEEEEEcC----------CCCeEEEEe
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA-------SDIRVTFADQ--------SAYDAKIVGFDQ----------DKDVAVLRI 206 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~-------~~i~V~~~dg--------~~~~a~vv~~d~----------~~DlAlLkv 206 (418)
+.|.|.+|+++ ||||||||+.+. ..+.|.+... ..+..+-+..++ .+|||||++
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 257 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 257 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEE
T ss_pred CCeEEEEeCCC-EEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEEE
Confidence 46999999987 999999999753 2356666432 123344333332 359999999
Q ss_pred cCCC---CCCcccccCCCCC-CCCCCEEEEEeCCCCCC---CceeEeEEeeeeeeecccCC------CCCcccEEEE---
Q 014786 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAAT------GRPIQDVIQT--- 270 (418)
Q Consensus 207 ~~~~---~~~~~~~l~~~~~-~~~G~~V~~vG~p~g~~---~~~~~G~Vs~~~~~~~~~~~------~~~~~~~i~~--- 270 (418)
+.+. ..+.|+.|..... +..|..+++.||..... .......+.-+......... ......++..
T Consensus 258 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~ 337 (399)
T 1gpz_A 258 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 337 (399)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECG
T ss_pred CCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccC
Confidence 8764 2466777754432 45789999999864321 12222222222211111000 0011234443
Q ss_pred --ccccCCCCCCCceeCC---Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 271 --~~~i~~G~SGGPl~n~---~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
....+.|+|||||+-. ++ .++||++++.. .+ .+.+...-+....+++++.++
T Consensus 338 ~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~-C~--~~~~vyt~V~~y~~WI~~~~~ 396 (399)
T 1gpz_A 338 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIG-CS--RGYGFYTKVLNYVDWIKKEME 396 (399)
T ss_dssp GGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTT-TT--TTEEEEEEGGGGHHHHHHHTC
T ss_pred CCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCC-cC--CCCeEEEEhHHhHHHHHHHhc
Confidence 2357899999999842 34 59999998753 22 134566667777777776554
No 130
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=98.99 E-value=1.7e-08 Score=109.80 Aligned_cols=173 Identities=16% Similarity=0.239 Sum_probs=104.2
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcC-CCCeEEEEecCCC---CCCc
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (418)
...+.|.||+++ +|||||||+.+. ..+.|.+.. .+.+...-+..++ ..|||||+++.+. ..+.
T Consensus 585 ~~~CGGSLIs~~-wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V~ 663 (791)
T 4dur_A 585 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 663 (791)
T ss_dssp CEEEEEEEEETT-EEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEEeCC-EEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCcee
Confidence 457999999987 999999999753 356666642 1234444444444 4799999998753 3456
Q ss_pred ccccCCCC-CCCCCCEEEEEeCCCCCC----CceeEeEEeeeeeeeccc---CCCCCcccEEEEc-----cccCCCCCCC
Q 014786 215 PIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-----AAINPGNSGG 281 (418)
Q Consensus 215 ~~~l~~~~-~~~~G~~V~~vG~p~g~~----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~~-----~~i~~G~SGG 281 (418)
++.|.... .+..|..+++.||..... .......+.-+....... ..+.....++... ...+.|+|||
T Consensus 664 PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGG 743 (791)
T 4dur_A 664 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGG 743 (791)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCccc
Confidence 66665432 356789999999864321 122222222222211111 1112223444432 3567899999
Q ss_pred ceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 282 PLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 282 Pl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
||+-. +| .|+||++++.. .+....-+...-+....++|++.++
T Consensus 744 PLv~~~~~~~~LvGIvS~G~g-C~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 744 PLVCFEKDKYILQGVTSWGLG-CARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp EEEEEETTEEEEEEECCTTTC-CBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred ceEEEeCCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 99953 23 49999998643 2222334566777777888877654
No 131
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.94 E-value=5.2e-09 Score=107.88 Aligned_cols=178 Identities=17% Similarity=0.184 Sum_probs=100.0
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCCC-cEEEEEEEEEcC----------------CCCeEEEEecCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ-SAYDAKIVGFDQ----------------DKDVAVLRIDAPK 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg-~~~~a~vv~~d~----------------~~DlAlLkv~~~~ 210 (418)
...|.|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+-+..++ .+|||||+++.+.
T Consensus 241 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v 319 (497)
T 1rrk_A 241 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 319 (497)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCC
T ss_pred CceeEEEEecCC-EEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCC
Confidence 457999999987 999999999753 4678888652 445555444432 3599999998764
Q ss_pred ---CCCcccccCCCC------CCCCCCEEEEEeCCCCC------------CCceeEeEEeeee---eeecc--------c
Q 014786 211 ---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGL------------DHTLTTGVISGLR---REISS--------A 258 (418)
Q Consensus 211 ---~~~~~~~l~~~~------~~~~G~~V~~vG~p~g~------------~~~~~~G~Vs~~~---~~~~~--------~ 258 (418)
..+.|+.|.... .+..|..+++.||.... ........+.-+. ...+. +
T Consensus 320 ~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 399 (497)
T 1rrk_A 320 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 399 (497)
T ss_dssp CCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccc
Confidence 245677775432 23455555444432110 1112222221111 00110 0
Q ss_pred C-----CCCCcccEEEEc-------cccCCCCCCCceeCC-Cc--eEEEEEeeeeC-CCC------CCCCc--cceeecc
Q 014786 259 A-----TGRPIQDVIQTD-------AAINPGNSGGPLLDS-SG--SLIGINTAIYS-PSG------ASSGV--GFSIPVD 314 (418)
Q Consensus 259 ~-----~~~~~~~~i~~~-------~~i~~G~SGGPl~n~-~G--~VVGI~s~~~~-~~~------~~~~~--~~aIp~~ 314 (418)
. .......++... ...|.|+|||||+.. +| .++||+|++.. .++ ...++ +...-+.
T Consensus 400 ~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~ 479 (497)
T 1rrk_A 400 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 479 (497)
T ss_dssp TTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGG
T ss_pred cccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHH
Confidence 0 001123455543 247899999999954 34 39999999863 232 11111 1445567
Q ss_pred cchhhhhhhhhcccc
Q 014786 315 TVNGIVDQLVKFGKV 329 (418)
Q Consensus 315 ~i~~~l~~l~~~g~v 329 (418)
...+|+++.++...+
T Consensus 480 ~~~~WI~~~~~~~~~ 494 (497)
T 1rrk_A 480 QVLPWLKEKLQDEDL 494 (497)
T ss_dssp GGHHHHHHHTTTSSC
T ss_pred HHHHHHHHHhCcccc
Confidence 778888776655433
No 132
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.92 E-value=1.4e-08 Score=108.23 Aligned_cols=172 Identities=19% Similarity=0.221 Sum_probs=94.6
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC-
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (418)
...+.|.||+++ ||||+|||+.+. ..+.|.+.. +..+.++-+..++ .+|||||+++.+.
T Consensus 413 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~ 491 (625)
T 2f83_A 413 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 491 (625)
T ss_dssp EEEEEEEECSSS-EEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCC
T ss_pred cEEEEEEEECCC-EEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCccc
Confidence 357999999986 999999999753 346676532 2235555555554 3599999998754
Q ss_pred --CCCcccccCCCC-CCCCCCEEEEEeCCCCCC-----CceeEeEEeeeeeeecccC-CC-CCcccEEE-----EccccC
Q 014786 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA-TG-RPIQDVIQ-----TDAAIN 275 (418)
Q Consensus 211 --~~~~~~~l~~~~-~~~~G~~V~~vG~p~g~~-----~~~~~G~Vs~~~~~~~~~~-~~-~~~~~~i~-----~~~~i~ 275 (418)
..+.|+.|.... ....++.+++.||..... .......+.-+........ .+ .....++. -....+
T Consensus 492 ~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C 571 (625)
T 2f83_A 492 YTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 571 (625)
T ss_dssp CBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------
T ss_pred CCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCC
Confidence 245666665432 245688899999864321 1112222211111111000 00 01111221 124568
Q ss_pred CCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 276 PGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 276 ~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
.|+|||||+-. +| .++||++++.. .+.....+...-+....+++++.+
T Consensus 572 ~GDSGGPLv~~~~~~~~lvGIvS~G~~-C~~~~~P~vyT~V~~y~~WI~~~~ 622 (625)
T 2f83_A 572 KGDSGGPLSCKHNEVWHLVGITSWGEG-CAQRERPGVYTNVVEYVDWILEKT 622 (625)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEECCC-----CCCCEEEEGGGGHHHHHHTC
T ss_pred CCCcccceEEEECCeEEEEEEEEeCCC-CCCCCCCeEEEEHHHHHHHHHHHH
Confidence 89999999853 45 59999998743 222223455566666777776543
No 133
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=98.92 E-value=4.5e-09 Score=113.70 Aligned_cols=176 Identities=19% Similarity=0.203 Sum_probs=99.9
Q ss_pred CeEEEEEEEcCCcEEEecccccCC---CCeEEEEeC-CCcEEEEEEEEEcC----------------CCCeEEEEecCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFA-DQSAYDAKIVGFDQ----------------DKDVAVLRIDAPK 210 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~-dg~~~~a~vv~~d~----------------~~DlAlLkv~~~~ 210 (418)
...|.|.+|+++ ||||+|||+.+ ...+.|.+. ..+.+.++-+..++ .+|||||+++.+.
T Consensus 483 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv 561 (741)
T 3hrz_D 483 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 561 (741)
T ss_dssp ---EEEEECSSS-EEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCC
T ss_pred CCEEEEEEecCC-EEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcC
Confidence 457999999987 99999999974 456788876 33455555555543 3599999998754
Q ss_pred ---CCCcccccCCCC------CCCCCCEEEEEeCCCCCCCc------------eeEeEEeeee---eeecc--------c
Q 014786 211 ---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGLDHT------------LTTGVISGLR---REISS--------A 258 (418)
Q Consensus 211 ---~~~~~~~l~~~~------~~~~G~~V~~vG~p~g~~~~------------~~~G~Vs~~~---~~~~~--------~ 258 (418)
..+.++.|.... .+..|..+.+.||..-.... .....+.-.. +.... +
T Consensus 562 ~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 641 (741)
T 3hrz_D 562 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 641 (741)
T ss_dssp CCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEeecCcccchhhhhhhhcccc
Confidence 245666664221 14556666666653221111 1111111111 00000 0
Q ss_pred C-----CCCCcccEEEE-------ccccCCCCCCCceeCC-Cce--EEEEEeeeeC-CCCC---CCCc-----cceeecc
Q 014786 259 A-----TGRPIQDVIQT-------DAAINPGNSGGPLLDS-SGS--LIGINTAIYS-PSGA---SSGV-----GFSIPVD 314 (418)
Q Consensus 259 ~-----~~~~~~~~i~~-------~~~i~~G~SGGPl~n~-~G~--VVGI~s~~~~-~~~~---~~~~-----~~aIp~~ 314 (418)
. .......++.. +...+.|+|||||+.. +|+ ++||+|++.. .++. .... ++..-+.
T Consensus 642 ~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~~~~~~~p~~~~~~vyt~V~ 721 (741)
T 3hrz_D 642 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLF 721 (741)
T ss_dssp TTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC------CCCTTCEEEEEEGG
T ss_pred ccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCCcccccCCCCCccceEEEhH
Confidence 0 00112345544 2347889999999964 333 9999999862 2222 1222 5667788
Q ss_pred cchhhhhhhhhcc
Q 014786 315 TVNGIVDQLVKFG 327 (418)
Q Consensus 315 ~i~~~l~~l~~~g 327 (418)
..++|+++.++..
T Consensus 722 ~~~~WI~~~i~~~ 734 (741)
T 3hrz_D 722 QVLPWLKEKLQDE 734 (741)
T ss_dssp GSHHHHHHHTTTS
T ss_pred HhHHHHHHHhcCC
Confidence 8888988877654
No 134
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.92 E-value=1.6e-09 Score=88.14 Aligned_cols=77 Identities=25% Similarity=0.333 Sum_probs=61.3
Q ss_pred ccccccCeeecc---chhhh-hh----CccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHH
Q 014786 329 VTRPILGIKFAP---DQSVE-QL----GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSD 398 (418)
Q Consensus 329 v~~~~lGv~~~~---~~~~~-~~----~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~d 398 (418)
-.+++||+.+.. ....+ .+ ...|++|.+|.++|||+++||++ ||+|++|||++|.+ +++
T Consensus 16 ~~~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~ 84 (104)
T 3sfj_A 16 GENLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQI-----------GDKIMQVNGWDMTMVTHDQ 84 (104)
T ss_dssp TTEEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHH
T ss_pred CCCCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHH
Confidence 346789999872 11111 12 13799999999999999999999 99999999999976 459
Q ss_pred HHHHHhcCCCCCEEEEEEE
Q 014786 399 LYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 399 l~~~l~~~~~g~~v~l~v~ 417 (418)
+.+.+.. .+|+++.++|+
T Consensus 85 ~~~~l~~-~~g~~v~l~v~ 102 (104)
T 3sfj_A 85 ARKRLTK-RSEEVVRLLVT 102 (104)
T ss_dssp HHHHHTC-TTCSEEEEEEE
T ss_pred HHHHHHh-CCCCEEEEEEE
Confidence 9999876 67999999875
No 135
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.91 E-value=1.9e-09 Score=86.42 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=59.7
Q ss_pred ccccCeeeccchhhhhh--CccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCC
Q 014786 331 RPILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~--~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~ 408 (418)
..+||+.+........+ ...|++|.+|.+++||+++||++ ||+|++|||++|.+..++...+....+
T Consensus 13 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~ 81 (97)
T 2w4f_A 13 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGA 81 (97)
T ss_dssp TTBSSEEEEECTTSCCSBTTBCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS
T ss_pred CCceeEEEECCccCCcccCCCCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhCC
Confidence 57888887642211111 22799999999999999999999 999999999999999887665554458
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++++++|.
T Consensus 82 g~~v~l~v~ 90 (97)
T 2w4f_A 82 GTAVQMRVW 90 (97)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999875
No 136
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.90 E-value=7.9e-10 Score=88.22 Aligned_cols=56 Identities=27% Similarity=0.336 Sum_probs=52.5
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||++ ||++ ||+|++|||++|.++.|+.+++...++|++++|+|+
T Consensus 1 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~ 56 (91)
T 2kjp_A 1 NGIYASSVVENMPAKG-KIEV-----------GDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIE 56 (91)
T ss_dssp CCSSCCCCCCSSCCSS-CCCS-----------SCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEE
T ss_pred CceEEEEECCCChHHH-cCCC-----------CCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEE
Confidence 4889999999999999 9999 999999999999999999999998888999999875
No 137
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.89 E-value=1.8e-08 Score=106.03 Aligned_cols=171 Identities=15% Similarity=0.122 Sum_probs=86.5
Q ss_pred eEEEEEEEcCCcEEEecccccCCC--CeEEEEeCC----------CcEEEEEEEEEcC-------CCCeEEEEecCCCC-
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPKD- 211 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~~- 211 (418)
..+.|.||+++ ||||||||+.+. ..+.|.+.. ...+.++-+..++ .+|||||+++.+..
T Consensus 345 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~~ 423 (565)
T 2xrc_A 345 ITCGGIYIGGC-WILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGNK 423 (565)
T ss_dssp CCCCCEEEETT-EEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSSS
T ss_pred eeeeEEEEeCC-EEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeecccccc
Confidence 46899999987 999999999754 345665431 1234444444544 35999999987531
Q ss_pred ------CCcccccCCC-CCCCCCCEEEEEeCCCCCCC----ceeEeEEeeeeeeecccCCCCCc-ccEEEEc-----ccc
Q 014786 212 ------KLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPI-QDVIQTD-----AAI 274 (418)
Q Consensus 212 ------~~~~~~l~~~-~~~~~G~~V~~vG~p~g~~~----~~~~G~Vs~~~~~~~~~~~~~~~-~~~i~~~-----~~i 274 (418)
...|+.|... ..+..|+.+++.||...... ......+.-+.. -......... ..++-.. ...
T Consensus 424 ~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~-C~~~~~~~~~~~~~iCAg~~~g~~d~ 502 (565)
T 2xrc_A 424 KDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISN-CSKFYGNRFYEKEMECAGTYDGSIDA 502 (565)
T ss_dssp SCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSC-THHHHTTSCCTTTEEEEEEC------
T ss_pred ccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHH-hHHhhccCcCCCceEEeCCCCCCCcc
Confidence 2345555432 23567999999998643221 112222211110 0000001111 1244332 356
Q ss_pred CCCCCCCceeCC--Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 275 NPGNSGGPLLDS--SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 275 ~~G~SGGPl~n~--~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
+.|+|||||+-. +| .++||+|++.. .+.....+...-+....+++++.++
T Consensus 503 C~GDSGGPLv~~~~~~~~~lvGIvS~G~~-C~~~~~PgVYTrVs~y~~WI~~~i~ 556 (565)
T 2xrc_A 503 CKGDSGGPLVCMDANNVTYVWGVVSWGEN-CGKPEFPGVYTKVANYFDWISYHVG 556 (565)
T ss_dssp ----CCCEEEEECTTCCEEEEEEECC-------CCCCEEEEEGGGGHHHHHHHC-
T ss_pred CCCccccceEEEeCCCcEEEEEEEeeCCC-CCCCCCCEEEEEHHHHHHHHHHHhc
Confidence 789999999843 45 38999998753 2222234556667777777776543
No 138
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.87 E-value=3.8e-09 Score=85.57 Aligned_cols=56 Identities=29% Similarity=0.454 Sum_probs=52.7
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||++ ||++ ||+|++|||++|.++.|+.+++...++|++++++|.
T Consensus 7 ~Gv~V~~V~~~spA~~-GL~~-----------GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 62 (100)
T 3i18_A 7 DGVYVMSVKDDVPAAD-VLHA-----------GDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYK 62 (100)
T ss_dssp CCEEEEEECTTSGGGG-TCCT-----------TCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEE
T ss_pred CCEEEEEeCCCCchHH-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 7999999999999996 9999 999999999999999999999998888999999874
No 139
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.87 E-value=4e-09 Score=85.54 Aligned_cols=75 Identities=23% Similarity=0.385 Sum_probs=56.7
Q ss_pred cccccCeeeccch--hhhhhCc---cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHH
Q 014786 330 TRPILGIKFAPDQ--SVEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYR 401 (418)
Q Consensus 330 ~~~~lGv~~~~~~--~~~~~~~---~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~ 401 (418)
.++++|+.+.... ..+.++. .|++|.+|.++|||+++| |++ ||+|++|||++|.+ ..++.+
T Consensus 14 ~~~~lG~~~~~~~~~~~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~ 82 (103)
T 2fcf_A 14 PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVE 82 (103)
T ss_dssp C-CCCCEEEECCCC-------------EEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHH
T ss_pred CCCceeEEEEccCCCCcccccCCCCCCEEEEEeCCCCcHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHH
Confidence 3578999886521 1222222 699999999999999999 999 99999999999999 999999
Q ss_pred HHhcCCCCCEEEEEEE
Q 014786 402 ILDQCKVGDEVSCFTF 417 (418)
Q Consensus 402 ~l~~~~~g~~v~l~v~ 417 (418)
++... ++++.++|.
T Consensus 83 ~l~~~--~~~v~l~v~ 96 (103)
T 2fcf_A 83 AIRKA--GNPVVFMVQ 96 (103)
T ss_dssp HHHTC--CSSEEEEEE
T ss_pred HHHhC--CCcEEEEEE
Confidence 99865 448888774
No 140
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.86 E-value=4.8e-09 Score=83.17 Aligned_cols=69 Identities=19% Similarity=0.292 Sum_probs=57.4
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHH--HHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~--dl~~~l~~~~~g 409 (418)
..+|+.+...... ..|++|.+|.++|||+++||++ ||+|++|||++|.+.. ++.+++.. +|
T Consensus 13 ~~~G~~l~~~~~~----~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g 75 (91)
T 2pkt_A 13 GPWGFRLVGGKDF----EQPLAISRVTPGSKAALANLCI-----------GDVITAIDGENTSNMTHLEAQNRIKG--CT 75 (91)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CS
T ss_pred CCCCEEEEccCCC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 4567776542211 1589999999999999999999 9999999999999998 88888876 79
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|.
T Consensus 76 ~~v~l~v~ 83 (91)
T 2pkt_A 76 DNLTLTVA 83 (91)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999875
No 141
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.85 E-value=2.6e-09 Score=84.27 Aligned_cols=57 Identities=18% Similarity=0.167 Sum_probs=52.6
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|+.|..+.+++||+++||++ ||+|++|||++|.++.|+.+++...++|++++++|.
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~ 75 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQD-----------GDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVE 75 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCT-----------TCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEE
T ss_pred EEEEEEeCCCCCHHHHCCCCC-----------CCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 688999999999999999999 999999999999999999999987778999998874
No 142
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.84 E-value=2.4e-09 Score=86.59 Aligned_cols=69 Identities=25% Similarity=0.359 Sum_probs=56.1
Q ss_pred ccccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 014786 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~ 408 (418)
.+|||+.+..... ++ .|++|.+|.+++||+++||++ ||+|++|||++|.+. .++.+.+. .
T Consensus 21 ~~~lG~~~~~~~~---~~-~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~---~ 82 (100)
T 2eeh_A 21 AGRLGFSVRGGSE---HG-LGIFVSKVEEGSSAERAGLCV-----------GDKITEVNGLSLESTTMGSAVKVLT---S 82 (100)
T ss_dssp SSSCSEEEECCTT---TT-CCEEEEEECTTSHHHHHTCCS-----------SCEEEEETTEECSSCCHHHHHHHHH---S
T ss_pred CCCccEEEEcccc---CC-CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHhhc---C
Confidence 4789999876421 12 699999999999999999999 999999999999996 55555554 3
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++++|+|+
T Consensus 83 ~~~v~l~v~ 91 (100)
T 2eeh_A 83 SSRLHMMVR 91 (100)
T ss_dssp CSSEEEEEE
T ss_pred CCEEEEEEE
Confidence 788988874
No 143
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.84 E-value=3.6e-09 Score=93.53 Aligned_cols=69 Identities=20% Similarity=0.330 Sum_probs=60.3
Q ss_pred cccccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHH-HHHHHhcCCC
Q 014786 330 TRPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD-LYRILDQCKV 408 (418)
Q Consensus 330 ~~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~d-l~~~l~~~~~ 408 (418)
.++|||+.+.... .|++|.+|.+++||+++||+. ||+|++|||++|.++.+ +...+.+..+
T Consensus 14 ~~~~lG~~~~~~~-------~g~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~~ 75 (166)
T 1w9e_A 14 QDGKIGLRLKSID-------NGIFVQLVQANSPASLVGLRF-----------GDQVLQINGENCAGWSSDKAHKVLKQAF 75 (166)
T ss_dssp TTSCCSEEEEEET-------TEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHCC
T ss_pred CCCcEeEEEEeCC-------CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcCC
Confidence 4789999998743 789999999999999999999 99999999999999987 7666655567
Q ss_pred CCEEEEEE
Q 014786 409 GDEVSCFT 416 (418)
Q Consensus 409 g~~v~l~v 416 (418)
|++++++|
T Consensus 76 ~~~v~l~v 83 (166)
T 1w9e_A 76 GEKITMTI 83 (166)
T ss_dssp SSEEEEEE
T ss_pred CCEEEEEE
Confidence 88988876
No 144
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.83 E-value=8.1e-09 Score=80.71 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=52.4
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.+++...++|++++++|.
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 84 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELC 84 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEE
Confidence 679999999999999999 999 9999999999999 56899999988878999999874
No 145
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.83 E-value=8e-09 Score=87.13 Aligned_cols=69 Identities=28% Similarity=0.400 Sum_probs=59.3
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
..+|+.+..... .|++|.+|.+++||+++||++ ||+|++|||++|.++ +++.+++...++|
T Consensus 39 ~~lG~~l~~~~~------~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g 101 (124)
T 3tsv_A 39 DSVGLRLAGGND------VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKG 101 (124)
T ss_dssp SCCCEEEEECTT------SCEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECSSCCHHHHHHHHHHSCTT
T ss_pred CceeEEEecCCC------CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCC
Confidence 456776643211 689999999999999999999 999999999999999 8999999887889
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++++|+|.
T Consensus 102 ~~v~l~v~ 109 (124)
T 3tsv_A 102 EEVTILAQ 109 (124)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 99999874
No 146
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.83 E-value=5.3e-09 Score=83.19 Aligned_cols=67 Identities=27% Similarity=0.400 Sum_probs=58.5
Q ss_pred ccccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe-CCHHHHHHHHhcCCC
Q 014786 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV-SNGSDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v-~~~~dl~~~l~~~~~ 408 (418)
..+||+.+.... .|++|.+|.+++||+++| |++ ||+|++|||++| .+++|+.+++.. .
T Consensus 17 ~~~lG~~i~~~~-------~~v~V~~V~~~spA~~ag~L~~-----------GD~I~~ing~~v~~~~~~~~~~l~~--~ 76 (91)
T 2e7k_A 17 GEHLGVTFRVEG-------GELVIARILHGGMVAQQGLLHV-----------GDIIKEVNGQPVGSDPRALQELLRN--A 76 (91)
T ss_dssp TCCCCEEEEESS-------SSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCHHHHHHHHHT--C
T ss_pred CCcEeEEEEecC-------CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCHHHHHHHHHc--C
Confidence 468899987632 689999999999999987 999 999999999999 999999999986 3
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
++++.++|+
T Consensus 77 ~~~v~l~v~ 85 (91)
T 2e7k_A 77 SGSVILKIL 85 (91)
T ss_dssp CSSBCEEEE
T ss_pred CCeEEEEEE
Confidence 778888775
No 147
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.82 E-value=6.5e-09 Score=83.37 Aligned_cols=73 Identities=23% Similarity=0.398 Sum_probs=58.8
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+............|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++.. +
T Consensus 14 ~~lG~~i~~~~~~~~~~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~ 80 (97)
T 2jil_A 14 NTFGFVIRGGAHDDRNKSRPVVITSVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--C 80 (97)
T ss_dssp TBCSEEEEEECCSCC--CEEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--S
T ss_pred CccCEEEeCcccCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 467777754211111122689999999999999999 999 99999999999999 9999999987 7
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+++.|+|.
T Consensus 81 g~~v~l~v~ 89 (97)
T 2jil_A 81 GQEAALLIE 89 (97)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999874
No 148
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.82 E-value=6.9e-09 Score=84.12 Aligned_cols=73 Identities=18% Similarity=0.196 Sum_probs=60.4
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhh-cCccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~-aGl~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~ 408 (418)
.+||+.+...... ....|++|.+|.+++||++ +||++ ||+|++|||++| .+.+|+.++|...++
T Consensus 21 ~~lG~~i~~~~~~--~~~~~~~V~~V~~~spA~~~ggl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~~~ 87 (101)
T 2yt7_A 21 EGLGVALVESGWG--SLLPTAVIANLLHGGPAERSGALSI-----------GDRLTAINGTSLVGLPLAACQAAVRETKS 87 (101)
T ss_dssp CCCCEEEEECCCS--SSSCCEEEEEECTTSTTGGGSSCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHHTTT
T ss_pred CccCEEEEeCCCC--CCccCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 4788887642111 1225799999999999999 67999 999999999999 899999999998778
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++|+|+|+
T Consensus 88 g~~v~l~v~ 96 (101)
T 2yt7_A 88 QTSVTLSIV 96 (101)
T ss_dssp SSEEEEEEC
T ss_pred CCeEEEEEE
Confidence 999999874
No 149
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.82 E-value=8.9e-09 Score=80.89 Aligned_cols=69 Identities=19% Similarity=0.282 Sum_probs=57.2
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
..+|+.+...... ..|++|.+|.+++||+++||++ ||+|++|||++|.+ .+++.+++...+
T Consensus 12 ~~lG~~l~~~~~~----~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~-- 74 (87)
T 2pa1_A 12 APWGFRITGGRDF----HTPIMVTKVAERGKAKDADLRP-----------GDIIVAINGESAEGMLHAEAQSKIRQSP-- 74 (87)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECSSSHHHHTTCCT-----------TCEEEEETTEESTTCCHHHHHHHHHTCC--
T ss_pred CccCEEEecccCC----CCCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCC--
Confidence 4577777542211 1589999999999999999999 99999999999999 799999998764
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|.
T Consensus 75 ~~v~l~v~ 82 (87)
T 2pa1_A 75 SPLRLQLD 82 (87)
T ss_dssp SSEEEEEE
T ss_pred CeEEEEEE
Confidence 78888774
No 150
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.81 E-value=6.8e-09 Score=82.80 Aligned_cols=56 Identities=39% Similarity=0.484 Sum_probs=48.9
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+..++ +++...++|++++|+|+
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v~l~v~ 84 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKE-----------GDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLL 84 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCS-----------SCEEEEETTEECSSSCHH-HHHHHHTSSSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHH-HHHHhhcCCCEEEEEEE
Confidence 589999999999999999999 999999999999998665 45554457999999885
No 151
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.81 E-value=3.8e-09 Score=84.65 Aligned_cols=56 Identities=27% Similarity=0.482 Sum_probs=52.6
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||++ ||++ ||+|++|||++|.++.++.+++...++|++++++|+
T Consensus 5 ~Gv~V~~V~~~spA~~-GL~~-----------GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~ 60 (94)
T 2kl1_A 5 KGVYVMSVLPNMPAAG-RLEA-----------GDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFI 60 (94)
T ss_dssp CCEECCCCCTTSTTBT-TBCT-----------TCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEE
T ss_pred CcEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEE
Confidence 6899999999999999 9999 999999999999999999999998888999999874
No 152
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.80 E-value=7e-09 Score=82.25 Aligned_cols=67 Identities=25% Similarity=0.418 Sum_probs=56.0
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~ 410 (418)
.+|+.+.... +..|++|.+|.++|||+++||++ ||+|++|||++|. +.+++.+++... |+
T Consensus 15 ~~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~ 76 (91)
T 2vsp_A 15 GYGFHLNAIR-----GLPGSFIKEVQKGGPADLAGLED-----------EDVIIEVNGVNVLDEPYEKVVDRIQSS--GK 76 (91)
T ss_dssp BTSCCCBCCT-----TCSCCBC-CCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--CS
T ss_pred cccEEEEecc-----CCCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 4666664321 12688999999999999999999 9999999999999 999999999875 99
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
+++|+|.
T Consensus 77 ~v~l~v~ 83 (91)
T 2vsp_A 77 NVTLLVC 83 (91)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
No 153
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=4.7e-09 Score=88.40 Aligned_cols=73 Identities=23% Similarity=0.337 Sum_probs=61.1
Q ss_pred ccccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCC
Q 014786 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVG 409 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g 409 (418)
..+||+.+...... ....|++|.+|.+++||+++| |++ ||+|++|||++|.+..++.++|.. .+|
T Consensus 31 ~~~lG~~~~~~~~~--~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~l~~-~~g 96 (124)
T 1wh1_A 31 QDKLGLTVCYRTDD--EDDIGIYISEIDPNSIAAKDGRIRE-----------GDRIIQINGIEVQNREEAVALLTS-EEN 96 (124)
T ss_dssp TCCCCEEEECCCCC--SSCCCEEEEEECSSSHHHHTCCCCT-----------TCEEEEESSCBCCSHHHHHHHHTC-SSC
T ss_pred CCcccEEEEecCCC--CCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCHHHHHHHHHh-CCC
Confidence 35689988753211 113799999999999999999 999 999999999999999999999987 568
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++|.|+|.
T Consensus 97 ~~v~l~v~ 104 (124)
T 1wh1_A 97 KNFSLLIA 104 (124)
T ss_dssp CSCCEEEE
T ss_pred CEEEEEEE
Confidence 88888874
No 154
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.79 E-value=9.1e-09 Score=86.65 Aligned_cols=75 Identities=23% Similarity=0.407 Sum_probs=58.8
Q ss_pred cccccCeeeccch--hhhhhC---ccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHH
Q 014786 330 TRPILGIKFAPDQ--SVEQLG---VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYR 401 (418)
Q Consensus 330 ~~~~lGv~~~~~~--~~~~~~---~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~ 401 (418)
.++++|+.+.... ..+.++ ..|++|.+|.++|||+++| |++ ||+|++|||++|.+ ..++.+
T Consensus 34 ~~~~lGi~v~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~ 102 (123)
T 2iwq_A 34 PSKSLGISIVGGRGMGSRLSNGEVMRGIFIKHVLEDSPAGKNGTLKP-----------GDRIVEVDGMDLRDASHEQAVE 102 (123)
T ss_dssp TTSCCSEEEEECC---------CCCCSEEEEEECSSSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHH
T ss_pred CCCCccEEEEeccCccccccccCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHH
Confidence 3578999886421 122222 2699999999999999999 999 99999999999998 899999
Q ss_pred HHhcCCCCCEEEEEEE
Q 014786 402 ILDQCKVGDEVSCFTF 417 (418)
Q Consensus 402 ~l~~~~~g~~v~l~v~ 417 (418)
++... +++++|+|.
T Consensus 103 ~l~~~--~~~v~l~v~ 116 (123)
T 2iwq_A 103 AIRKA--GNPVVFMVQ 116 (123)
T ss_dssp HHHHC--CSSEEEEEE
T ss_pred HHHcC--CCeEEEEEE
Confidence 99864 558888764
No 155
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.79 E-value=7.4e-09 Score=85.12 Aligned_cols=76 Identities=22% Similarity=0.330 Sum_probs=57.0
Q ss_pred ccccCeeeccchhhhhh--CccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCC
Q 014786 331 RPILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~--~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~ 408 (418)
..+||+.+........+ ...|++|.+|.+++||+++||++ ||+|++|||++|.+..++.......++
T Consensus 25 ~~glG~~i~~g~~~~~~~~~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~ 93 (110)
T 1x5q_A 25 TGGLGISIAGGKGSTPYKGDDEGIFISRVSEEGPAARAGVRV-----------GDKLLEVNGVALQGAEHHEAVEALRGA 93 (110)
T ss_dssp SSSCSEEEEECTTSCCSSTTCCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHSC
T ss_pred CCeeeEEEEccccCCccccCCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHhhCC
Confidence 46777777532111111 22799999999999999999999 999999999999997665544433347
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++|+|+|.
T Consensus 94 g~~v~l~v~ 102 (110)
T 1x5q_A 94 GTAVQMRVW 102 (110)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999875
No 156
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.78 E-value=1.1e-08 Score=82.11 Aligned_cols=54 Identities=15% Similarity=0.119 Sum_probs=49.9
Q ss_pred EEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 353 ~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+|.+|.++|||+++||++ ||+|++|||++|.++.|+.+.+.....++.+.++|.
T Consensus 5 ~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~ 58 (95)
T 3id1_A 5 VVGEIAANSIAAEAQIAP-----------GTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVA 58 (95)
T ss_dssp BEEEECTTSHHHHTTCCT-----------TCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEE
T ss_pred EEEeeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 688999999999999999 999999999999999999999988777789988874
No 157
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.77 E-value=1.4e-08 Score=105.05 Aligned_cols=174 Identities=18% Similarity=0.186 Sum_probs=93.3
Q ss_pred CeEEEEEEEcCCcEEEecccccCCC---CeEEEEeCC-----CcEEEEEEEEEcC----------------CCCeEEEEe
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-----QSAYDAKIVGFDQ----------------DKDVAVLRI 206 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-----g~~~~a~vv~~d~----------------~~DlAlLkv 206 (418)
...|.|.+|+++ ||||+|||+.+. ..+.|++.+ ++.+.++-+..++ .+|||||++
T Consensus 246 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L 324 (509)
T 2odp_A 246 QETCRGALISDQ-WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLKL 324 (509)
T ss_dssp --CEEEEECSSS-EEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEEE
T ss_pred CcEEEEEEEcCC-EEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccccCCCeEEEEE
Confidence 457999999987 999999999753 456677643 2345555444442 369999999
Q ss_pred cCCC---CCCcccccCCCC------CCCCCCEEEEEeCCCCCCCc------------eeEeEEeeeeeeecc--------
Q 014786 207 DAPK---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGLDHT------------LTTGVISGLRREISS-------- 257 (418)
Q Consensus 207 ~~~~---~~~~~~~l~~~~------~~~~G~~V~~vG~p~g~~~~------------~~~G~Vs~~~~~~~~-------- 257 (418)
+.+. ..+.|+.|.... ....|..+.+.||..-.... ....++..+....+.
T Consensus 325 ~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~~ 404 (509)
T 2odp_A 325 AQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEKT 404 (509)
T ss_dssp SSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCTT
T ss_pred CCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHHHhhcccc
Confidence 8764 245666665322 12446655555543111111 111111100111110
Q ss_pred -cC-----CCCCcccEEEEc----cccCCCCCCCceeCCC-c--eEEEEEeeeeC-CCCC-----------CCCc----c
Q 014786 258 -AA-----TGRPIQDVIQTD----AAINPGNSGGPLLDSS-G--SLIGINTAIYS-PSGA-----------SSGV----G 308 (418)
Q Consensus 258 -~~-----~~~~~~~~i~~~----~~i~~G~SGGPl~n~~-G--~VVGI~s~~~~-~~~~-----------~~~~----~ 308 (418)
+. .......++... ...|.|+|||||+..+ | .++||+|++.. .++. ..+. +
T Consensus 405 ~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~~~~Pg~~y~~~ 484 (509)
T 2odp_A 405 MFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKRAPRSKVPPPRD 484 (509)
T ss_dssp TCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCCCCTTCSSCCCE
T ss_pred cccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCcccccccccCcccCCCCCCc
Confidence 00 001123455543 3578899999999642 3 49999999863 2321 1111 3
Q ss_pred ceeecccchhhhhhhhh
Q 014786 309 FSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 309 ~aIp~~~i~~~l~~l~~ 325 (418)
+..-+....+|+++.++
T Consensus 485 vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 485 FHINLFRMQPWLRQHLG 501 (509)
T ss_dssp EEEEGGGCHHHHHHHHT
T ss_pred eeeeHHHHhHHHHHHhC
Confidence 45566777788877654
No 158
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.77 E-value=1.3e-08 Score=80.38 Aligned_cols=67 Identities=24% Similarity=0.403 Sum_probs=56.6
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~ 410 (418)
.+|+.+..... ..|++|.+|.+++||+++||++ ||+|++|||++|.+. .++.+++... |+
T Consensus 16 g~G~~~~~~~~-----~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~ 77 (90)
T 2he4_A 16 GYGFNLHSDKS-----RPGQYIRSVDPGSPAARSGLRA-----------QDRLIEVNGQNVEGLRHAEVVASIKAR--ED 77 (90)
T ss_dssp BCCEEEEECSS-----SSSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTSCHHHHHHHHTTS--SS
T ss_pred CccEEEEccCC-----CCCEEEEEECCCChHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 46666654221 2689999999999999999999 999999999999999 8999999864 89
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.++|+
T Consensus 78 ~v~l~v~ 84 (90)
T 2he4_A 78 EARLLVV 84 (90)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9999875
No 159
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.76 E-value=2.1e-08 Score=78.84 Aligned_cols=68 Identities=13% Similarity=0.227 Sum_probs=55.0
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~ 410 (418)
.+|+.+...... ..|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+.+... |+
T Consensus 14 ~~G~~l~~g~~~----~~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~~--g~ 76 (88)
T 2uzc_A 14 PWGFRLQGGKDF----NMPLTISSLKDGGKAAQANVRI-----------GDVVLSIDGINAQGMTHLEAQNKIKGC--TG 76 (88)
T ss_dssp CCCEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTC--CS
T ss_pred cccEEEECcCCC----CCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CC
Confidence 467766532111 1578999999999999999999 999999999999998 7888877653 89
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.++|.
T Consensus 77 ~v~l~v~ 83 (88)
T 2uzc_A 77 SLNMTLQ 83 (88)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 9998874
No 160
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=9.1e-09 Score=87.06 Aligned_cols=57 Identities=19% Similarity=0.339 Sum_probs=53.0
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++| |++ ||+|++|||++|. ++.|+.++|...++|++|+|+|+
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~ 108 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQP-----------GDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAY 108 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCT-----------TCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEE
T ss_pred CcEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEE
Confidence 467899999999999999 999 9999999999995 89999999998889999999885
No 161
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.75 E-value=1.9e-08 Score=77.48 Aligned_cols=61 Identities=18% Similarity=0.387 Sum_probs=52.2
Q ss_pred hhhhCc---cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 344 VEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 344 ~~~~~~---~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+.+|+ .|++|.+|.+++||+++| |++ ||+|++|||+++. +..++.+++... ++++.++|.
T Consensus 12 ~~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 78 (81)
T 2rcz_A 12 NEEYGLRLASHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQ 78 (81)
T ss_dssp TCCCCEEEEEEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEEEE
T ss_pred CCCCCEEEeCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEEEE
Confidence 344554 689999999999999999 999 9999999999999 999999999864 348888774
No 162
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.75 E-value=1.2e-08 Score=82.37 Aligned_cols=67 Identities=22% Similarity=0.302 Sum_probs=56.2
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..||+.+..... .|++|.+|.+++||+++| |++ ||+|++|||++|.+ ++|+.+++...
T Consensus 24 ~~lG~~l~~~~~------~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~~-- 84 (97)
T 2ejy_A 24 EPMGICLKLNEK------QSCTVARILHGGMIHRQGSLHV-----------GDEILEINGTNVTNHSVDQLQKAMKET-- 84 (97)
T ss_dssp SCCSEEEEECTT------CCEEEEEECSSSHHHHHTCCCT-----------TCEEEEETTBCCCSSCSHHHHHHHHHC--
T ss_pred CCeeEEEEeCCC------CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--
Confidence 356777654211 589999999999999999 999 99999999999996 89999999864
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
+++++|+|.
T Consensus 85 ~~~v~L~V~ 93 (97)
T 2ejy_A 85 KGMISLKVI 93 (97)
T ss_dssp CEEEEEEEE
T ss_pred CCeEEEEEE
Confidence 678888875
No 163
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.75 E-value=1.2e-08 Score=85.60 Aligned_cols=57 Identities=21% Similarity=0.299 Sum_probs=52.8
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++| |++ ||+|++|||++|.+ .+|+.++++..++|++++|+|.
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 104 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIE 104 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCT-----------TCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEE
T ss_pred CCcEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEE
Confidence 568999999999999999 999 99999999999988 9999999998777999999874
No 164
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.74 E-value=3.5e-07 Score=84.55 Aligned_cols=162 Identities=14% Similarity=0.254 Sum_probs=107.8
Q ss_pred HcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCC-CeEEEEeCCCcEEEEE-----EEEEcC
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFDQ 197 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~-~~i~V~~~dg~~~~a~-----vv~~d~ 197 (418)
.+...|+.++....+. ...--|+..+ .||+|++|.++.. ..++|+...|.- ... -+..-+
T Consensus 13 ~ia~~iC~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~rnng~L~I~s~hG~f-~v~nt~~lki~~i~ 78 (241)
T 3mmg_A 13 PISACVCLLENSSDGH-----------SERLFGIGFG--PYIIANQHLFRRNNGELTIKTMHGEF-AVANSTQLQMKPVE 78 (241)
T ss_dssp HHHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGSSTTCEEEEEETTEEE-EEEEGGGSCEEECT
T ss_pred hhhheEEEEEEEeCCC-----------EEEEEEEeEC--CEEEEChhhcccCCCeEEEEECCceE-EccCCCceeeEEeC
Confidence 3456688887654322 1234577775 4999999999865 468888877743 222 245567
Q ss_pred CCCeEEEEecCCCCCCcccccC-CCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCC
Q 014786 198 DKDVAVLRIDAPKDKLRPIPIG-VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (418)
Q Consensus 198 ~~DlAlLkv~~~~~~~~~~~l~-~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~ 276 (418)
..||.++|+.. ++||.+-. .-..+..||+|+++|..+.... ....|+........ ....+.........
T Consensus 79 g~DiiiIrmPk---DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~--~~s~vSesS~i~p~-----~~~~fWkHwIsT~~ 148 (241)
T 3mmg_A 79 GRDIIVIKMAK---DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKS--VSSLVSESSHIVHK-----EDTSFWQHWITTKD 148 (241)
T ss_dssp BSSCEEEECCT---TSCCCCSCCCBCCCCTTCCEEEEEEEECSSC--EEEEEEEEECCEEC-----TTSSEEEECBCCCT
T ss_pred CccEEEEeCCC---CCCCcchhcccCCCCCCCeEEEEEeecccCC--ccEEECCcceeEEc-----CCCCEEEEEcCCCC
Confidence 88999999965 35655532 2356899999999997554332 12234432222111 11357788889999
Q ss_pred CCCCCceeCC-CceEEEEEeeeeCCCCCCCCccceeec
Q 014786 277 GNSGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 277 G~SGGPl~n~-~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
|+-|+|+++. +|.+|||++..... ...+|+.|+
T Consensus 149 G~CGlPlVs~~Dg~IVGiHsl~~~~----~~~N~F~~f 182 (241)
T 3mmg_A 149 GQAGSPLVSIIDGNILGIHSLTHTT----NGSNYFVEF 182 (241)
T ss_dssp TCTTCEEEETTTCCEEEEEEEEETT----TCCEEEEEC
T ss_pred CcCCCeEEEcCCCcEEEEEecccCC----CCcEEEEcC
Confidence 9999999995 99999999987543 335777776
No 165
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.74 E-value=1.8e-08 Score=80.62 Aligned_cols=70 Identities=24% Similarity=0.379 Sum_probs=56.9
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~ 410 (418)
.+|+.+...... -+..|++|.+|.+++||+++||++ ||+|++|||++|.+ ..++.+++... |+
T Consensus 15 ~~G~~l~~~~~~--~~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~ 79 (96)
T 2v90_A 15 GFGFLLREEKGL--DGRPGQFLWEVDPGLPAKKAGMQA-----------GDRLVAVAGESVEGLGHEETVSRIQGQ--GS 79 (96)
T ss_dssp BSCEEEEEEECT--TSCEEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHTT--TT
T ss_pred cccEEEEeccCC--CCCCCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 466666542100 112589999999999999999999 99999999999999 79999999873 99
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.|+|.
T Consensus 80 ~v~l~v~ 86 (96)
T 2v90_A 80 CVSLTVV 86 (96)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999875
No 166
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.73 E-value=1.4e-08 Score=81.61 Aligned_cols=67 Identities=21% Similarity=0.316 Sum_probs=56.6
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~ 410 (418)
.+|+.+.... +..|++|.+|.++|||+++||++ ||+|++|||++|.+ ..++.+++... +|+
T Consensus 21 g~G~~~~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 83 (98)
T 2jxo_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDE 83 (98)
T ss_dssp CCCEEEECCC-----SSSCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-TTE
T ss_pred cccEEEEecC-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCc
Confidence 4677665422 12589999999999999999999 99999999999999 99999999876 788
Q ss_pred EEEEEE
Q 014786 411 EVSCFT 416 (418)
Q Consensus 411 ~v~l~v 416 (418)
.+.++|
T Consensus 84 ~~~l~v 89 (98)
T 2jxo_A 84 TKLLVV 89 (98)
T ss_dssp EEEEEC
T ss_pred EEEEEE
Confidence 887765
No 167
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.73 E-value=1.7e-08 Score=79.72 Aligned_cols=55 Identities=25% Similarity=0.428 Sum_probs=49.3
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |+. ||+|++|||+++ .+.+++.++++.. ++++.+++.
T Consensus 21 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~--~~~v~L~v~ 78 (88)
T 3e17_A 21 SQIFVKEMTRTGLATKDGNLHE-----------GDIILKINGTVTENMSLTDARKLIEKS--RGKLQLVVL 78 (88)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEe
Confidence 589999999999999999 999 999999999999 7889999999874 558888763
No 168
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.73 E-value=8.8e-09 Score=83.74 Aligned_cols=69 Identities=14% Similarity=0.231 Sum_probs=57.7
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
.++|+.+...... + .+++|.+|.+++||+++||++ ||+|++|||++|.+ ..++.+++... |
T Consensus 15 ~~lG~~l~~g~~~---~-~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g 77 (103)
T 1v5l_A 15 APWGFRLSGGIDF---N-QPLVITRITPGSKAAAANLCP-----------GDVILAIDGFGTESMTHADAQDRIKAA--S 77 (103)
T ss_dssp SCCSBCCEEETTT---T-EEEECSCBCTTSTTGGGTCCT-----------TCBEEEETTEECSSCCHHHHHHHHTTC--C
T ss_pred CCcCEEEeccccC---C-CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 5677777532211 1 478999999999999999999 99999999999999 99999999875 8
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.|+|.
T Consensus 78 ~~v~l~v~ 85 (103)
T 1v5l_A 78 YQLCLKID 85 (103)
T ss_dssp SEEECEEC
T ss_pred CeEEEEEE
Confidence 99998874
No 169
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.72 E-value=2e-08 Score=81.79 Aligned_cols=68 Identities=25% Similarity=0.370 Sum_probs=57.7
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
.++|+.+..... ...|++|.+|.+++||+++||++ ||+|++|||++|.+ ..++.+++.. |
T Consensus 27 ~~lG~~~~~~~~----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~---~ 88 (104)
T 1wi2_A 27 AQLGFNIRGGKA----SQLGIFISKVIPDSDAHRAGLQE-----------GDQVLAVNDVDFQDIEHSKAVEILKT---A 88 (104)
T ss_dssp CCCSEEEECCSS----SCCCCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH---S
T ss_pred CCccEEEEcccC----CCCCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC---C
Confidence 678888865321 11689999999999999999999 99999999999999 8999999986 7
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.|+|.
T Consensus 89 ~~v~l~v~ 96 (104)
T 1wi2_A 89 REISMRVR 96 (104)
T ss_dssp SSEEEEEE
T ss_pred CEEEEEEE
Confidence 78888874
No 170
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.72 E-value=3.1e-08 Score=83.23 Aligned_cols=57 Identities=25% Similarity=0.441 Sum_probs=53.0
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.++|...+.|++|+|+|.
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 103 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMET-----------GDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLC 103 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEE
Confidence 689999999999999999 999 9999999999999 67899999998878999999874
No 171
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.71 E-value=3.1e-08 Score=83.04 Aligned_cols=73 Identities=26% Similarity=0.391 Sum_probs=58.5
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
.+|+.+..... ...+..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++...++|
T Consensus 42 ~lG~~l~~~~~-~~~g~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g 109 (121)
T 2kom_A 42 GLGFSITSRDV-TIGGSAPIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLVGKSQEEVVSLLRSTKME 109 (121)
T ss_dssp CCCEEEECCCC-SSSSSCCEEEEEECTTSHHHHHTCCCS-----------SSEEEEETTEECTTSCHHHHHHHHHHCCSS
T ss_pred cEeEEEEeccC-CcCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHhcCCCC
Confidence 35666654221 11123689999999999999999 999 99999999999998 58999999877779
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++|+|+|.
T Consensus 110 ~~v~l~v~ 117 (121)
T 2kom_A 110 GTVSLLVF 117 (121)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 99999874
No 172
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.71 E-value=1.3e-08 Score=82.26 Aligned_cols=56 Identities=27% Similarity=0.217 Sum_probs=50.4
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcC-CCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQC-KVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~-~~g~~v~l~v 416 (418)
.+.+|.+|.++|||++|||++ ||+|++|||++|. +++|+.+.+.+. +.|+.+.|.|
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~-----------GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV 97 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQV-----------GRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLV 97 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEE
Confidence 578899999999999999999 9999999999984 999999999874 5688888876
No 173
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.71 E-value=2.8e-08 Score=78.62 Aligned_cols=60 Identities=18% Similarity=0.406 Sum_probs=51.7
Q ss_pred hhhCc---cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 345 EQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 345 ~~~~~---~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+.+|+ .|++|.+|.+++||+++| |++ ||+|++|||+++. ++.++.+++... ++.+.++|.
T Consensus 15 ~~~g~~~~~gv~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 80 (92)
T 3cyy_A 15 EEYGLRLASHIFVKEISQDSLAARDGNIQE-----------GDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQ 80 (92)
T ss_dssp SCCCEEEEEEEEEEEECTTCHHHHSCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT--TTEEEEEEE
T ss_pred CCCCEEEeCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEEEE
Confidence 34454 689999999999999999 999 9999999999999 999999999863 458887764
No 174
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=1.4e-08 Score=82.46 Aligned_cols=71 Identities=17% Similarity=0.230 Sum_probs=57.8
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+..... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++...++
T Consensus 20 ~g~G~~i~~g~~----~~~~~~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 84 (103)
T 1uep_A 20 SGFGFRILGGDE----PGQPILIGAVIAMGSADRDGRLHP-----------GDELVYVDGIPVAGKTHRYVIDLMHHAAR 84 (103)
T ss_dssp SSCCEEECCCCS----TTSCCBEEEECTTSTTGGGTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHH
T ss_pred CccCEEEeeecC----CCCCeEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 347777754211 01689999999999999999 999 99999999999965 7899999987656
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++|+|+|.
T Consensus 85 g~~v~l~v~ 93 (103)
T 1uep_A 85 NGQVNLTVR 93 (103)
T ss_dssp HTEEEEEEE
T ss_pred CCcEEEEEE
Confidence 899999874
No 175
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.70 E-value=4.3e-08 Score=77.27 Aligned_cols=69 Identities=17% Similarity=0.291 Sum_probs=54.2
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
..+|+.+...... ..|++|.+|.+++||+++||++ ||+|++|||++|.+ ..++...+.. .|
T Consensus 13 ~~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g 75 (89)
T 2q3g_A 13 APWGFRLQGGKDF----NVPLSISRLTPGGKAAQAGVAV-----------GDWVLSIDGENAGSLTHIEAQNKIRA--CG 75 (89)
T ss_dssp SCCCEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHT--CT
T ss_pred CcccEEEECcCCC----CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 3467776432111 1588999999999999999999 99999999999994 5788777765 38
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|.
T Consensus 76 ~~v~l~v~ 83 (89)
T 2q3g_A 76 ERLSLGLS 83 (89)
T ss_dssp TEEEEEEE
T ss_pred CEEEEEEE
Confidence 88888874
No 176
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.69 E-value=3.4e-08 Score=78.72 Aligned_cols=67 Identities=25% Similarity=0.462 Sum_probs=54.5
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~ 410 (418)
.+|+.+..... ..|++|..|.+++||+++||++ ||+|++|||++|.++ .++.+++.. .++
T Consensus 17 ~~G~~l~~~~~-----~~~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~ 78 (95)
T 3r68_A 17 GYGFYLRAGPE-----QKGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGD 78 (95)
T ss_dssp BCSCEEEEC-------CCSEEEECCCTTSHHHHHTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--TTT
T ss_pred cccEEEEecCC-----CCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCC
Confidence 46777654221 1589999999999999999999 999999999999999 899999986 466
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.+.++
T Consensus 79 ~~~~~~~ 85 (95)
T 3r68_A 79 QTTLLVL 85 (95)
T ss_dssp EEEEEEE
T ss_pred eEEEEEE
Confidence 7776654
No 177
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.69 E-value=1.3e-08 Score=81.27 Aligned_cols=69 Identities=20% Similarity=0.264 Sum_probs=55.9
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
..+|+.+..... ...|++|.+|.+++||+++||++ ||+|++|||++|.+. .++.+++....
T Consensus 16 ~~lG~~l~~g~~----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~-- 78 (94)
T 1vb7_A 16 APWGFRISGGRD----FHTPIIVTKVTERGKAEAADLRP-----------GDIIVAINGQSAENMLHAEAQSKIRQSA-- 78 (94)
T ss_dssp SCCSBCCEEETT----TTEEEECCCBCTTSSHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTCC--
T ss_pred CCccEEEecccC----CCCCeEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCC--
Confidence 456776654211 11589999999999999999999 999999999999998 89999998653
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|.
T Consensus 79 ~~v~l~v~ 86 (94)
T 1vb7_A 79 SPLRLQLD 86 (94)
T ss_dssp SSEEEEEE
T ss_pred CcEEEEEE
Confidence 78888774
No 178
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.69 E-value=2.8e-08 Score=81.31 Aligned_cols=73 Identities=23% Similarity=0.346 Sum_probs=57.3
Q ss_pred cccCeeeccchhhhhh-CccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVEQL-GVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~-~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~ 407 (418)
..||+.+......... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++..
T Consensus 25 ~~lG~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 91 (108)
T 2jre_A 25 SSLGISISGMRDQSTTGEATGIYVKSLIPGSAAALDGRIEP-----------NDKILRVDDVNVQGMAQSDVVEVLRN-- 91 (108)
T ss_dssp SCCSEEEECCCCCSCSSCCCCCEEEEECTTSHHHHHSSCCS-----------SEEEEEETTEECTTSCHHHHHHHHHH--
T ss_pred CCcCEEEEcccCCCCCCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 4567776542111111 22699999999999999999 999 99999999999998 6888888876
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|+++.|+|.
T Consensus 92 ~g~~v~l~v~ 101 (108)
T 2jre_A 92 AGNPVRLLLI 101 (108)
T ss_dssp HCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 6889998874
No 179
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.69 E-value=2.1e-08 Score=80.48 Aligned_cols=65 Identities=25% Similarity=0.336 Sum_probs=50.5
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCHH--HHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~~--dl~~~l~~~~~g 409 (418)
-+|+.+.... .|++|.+|.+++||+++| |++ ||+|++|||++|.+.. +....+. ..+
T Consensus 21 glG~~~~~~~-------~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~~~--~~~ 80 (96)
T 2qkv_A 21 ELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVSYALFK--GAN 80 (96)
T ss_dssp CCCEEEEECS-------SSEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCS
T ss_pred CccEEEEeCC-------CcEEEEEeCCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--cCC
Confidence 4677654421 689999999999999999 999 9999999999998743 3334443 357
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|.
T Consensus 81 ~~v~l~v~ 88 (96)
T 2qkv_A 81 GKVSMEVT 88 (96)
T ss_dssp SEEEEEEE
T ss_pred CcEEEEEE
Confidence 78988874
No 180
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.68 E-value=2.6e-08 Score=80.14 Aligned_cols=55 Identities=35% Similarity=0.459 Sum_probs=50.3
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||+. ||+|++|||++|. +..++..++. ++|++++++|.
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~--~~g~~v~l~v~ 90 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRA-----------GDLITHINGESVLGLVHMDVVELLL--KSGNKISLRTT 90 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--cCCCEEEEEEE
Confidence 478999999999999999999 9999999999999 7889999887 47999999874
No 181
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.68 E-value=2.6e-08 Score=79.91 Aligned_cols=55 Identities=27% Similarity=0.447 Sum_probs=50.7
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++..++.. +|+++.|+|+
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 94 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKV-----------GDRILSLNGKDVRNSTEQAVIDLIKE--ADFKIELEIQ 94 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEE
Confidence 689999999999999999 999 999999999999997 788888876 7999999875
No 182
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.67 E-value=3.7e-08 Score=78.88 Aligned_cols=55 Identities=31% Similarity=0.421 Sum_probs=50.3
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ .+|+.+++... ++++.|+|+
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 93 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTP-----------GDTIASVNGLNVEGIRHREIVDIIKAS--GNVLRLETL 93 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEEE
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEE
Confidence 689999999999999999999 99999999999999 59999999875 568998875
No 183
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.67 E-value=3.9e-08 Score=78.14 Aligned_cols=53 Identities=25% Similarity=0.396 Sum_probs=48.6
Q ss_pred CcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 351 G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
| +|.+|.+++||+++||+. ||+|++|||++| .+..++.+++.. .|++++++|+
T Consensus 33 G-~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 87 (90)
T 1y7n_A 33 G-IICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATPHEKIVHILSN--AVGEIHMKTM 87 (90)
T ss_dssp T-EEEEECTTSHHHHHTCCS-----------SCEEEEETTEECTTSCHHHHHHHHHH--CCEEEEEEEE
T ss_pred C-EEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 5 899999999999999999 999999999999 579999999985 4899999885
No 184
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.67 E-value=2.6e-08 Score=81.19 Aligned_cols=55 Identities=29% Similarity=0.500 Sum_probs=50.1
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.++. ++.+++.. .|+++.++|.
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 82 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVL 82 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH--TTTEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEE
Confidence 689999999999999999999 9999999999999987 88888873 6889999875
No 185
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.67 E-value=3.1e-08 Score=82.24 Aligned_cols=72 Identities=24% Similarity=0.292 Sum_probs=57.4
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC---CHHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS---NGSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~---~~~dl~~~l~~~~ 407 (418)
..+|+.+...... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.+++..
T Consensus 32 ~~lG~~i~~~~~~-~~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~-- 97 (117)
T 2o2t_A 32 GGLGFSVVGLRSE-NRGELGIFVQEIQEGSVAHRDGRLKE-----------TDQILAINGQALDQTITHQQAISILQK-- 97 (117)
T ss_dssp SCSSCCEEEEECC-C--CEEEEECCCCTTSHHHHHCCCCT-----------TCEEEEETTEECCTTSCHHHHHHHHHH--
T ss_pred CCCCEEEeecccC-CCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--
Confidence 4567776542110 1112689999999999999999 999 9999999999999 88999999876
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|++++|+|.
T Consensus 98 ~~~~v~l~v~ 107 (117)
T 2o2t_A 98 AKDTVQLVIA 107 (117)
T ss_dssp CCSEEEEEEE
T ss_pred CCCEEEEEEE
Confidence 5899999874
No 186
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.66 E-value=2.5e-08 Score=83.03 Aligned_cols=79 Identities=22% Similarity=0.313 Sum_probs=59.9
Q ss_pred cccccccccCeeeccchhhh-hhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHH
Q 014786 326 FGKVTRPILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYR 401 (418)
Q Consensus 326 ~g~v~~~~lGv~~~~~~~~~-~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~ 401 (418)
.++.....+|+.+....... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..
T Consensus 24 ~~~~~~~glG~~i~g~~~~~~~~~~~g~~V~~v~~~s~A~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~ 92 (117)
T 1ujd_A 24 DHTVSGNGLGIRIVGGKEIPGHSGEIGAYIAKILPGGSAEQTGKLME-----------GMQVLEWNGIPLTSKTYEEVQS 92 (117)
T ss_dssp SSCSSCCSCSEEEEEEEECSSSSSCEEEEEEEECTTCHHHHHSSCCT-----------TCEEEEETTEECTTCCHHHHHH
T ss_pred ccCCCCCcccEEEeCCCCCCcccCCcCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEcCCCCHHHHHH
Confidence 33444567888876422110 0112589999999999999999 999 99999999999977 578888
Q ss_pred HHhcCCCCCEEEEEEE
Q 014786 402 ILDQCKVGDEVSCFTF 417 (418)
Q Consensus 402 ~l~~~~~g~~v~l~v~ 417 (418)
++.. .+++|+|+|.
T Consensus 93 ~l~~--~~~~v~l~v~ 106 (117)
T 1ujd_A 93 IISQ--QSGEAEICVR 106 (117)
T ss_dssp HHSC--CSSCEEEEEE
T ss_pred HHhc--CCCEEEEEEE
Confidence 8875 6888998874
No 187
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.66 E-value=7e-08 Score=77.35 Aligned_cols=68 Identities=21% Similarity=0.327 Sum_probs=55.3
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
.+|+.+..... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++. ..|
T Consensus 17 ~lG~~i~~~~~----~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~--~~g 79 (97)
T 1n7e_A 17 PLGITISGTEE----PFDPIIISSLTKGGLAERTGAIHI-----------GDRILAINSSSLKGKPLSEAIHLLQ--MAG 79 (97)
T ss_dssp CCCEEEECCSS----TTSCCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TCC
T ss_pred CcCEEEEcccC----CCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCC
Confidence 46777654221 11689999999999999999 999 99999999999975 688888887 479
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.|+|.
T Consensus 80 ~~v~l~v~ 87 (97)
T 1n7e_A 80 ETVTLKIK 87 (97)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999874
No 188
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.65 E-value=5.4e-08 Score=79.95 Aligned_cols=74 Identities=26% Similarity=0.393 Sum_probs=58.8
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+...... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++...++
T Consensus 22 ~glG~~~~~~~~~-~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 89 (111)
T 2koj_A 22 EGLGFSITSRDVT-IGGSAPIYVKNILPRGAAIQDGRLKA-----------GDRLIEVNGVDLAGKSQEEVVSLLRSTKM 89 (111)
T ss_dssp TBTCEEEEECSCS-SSSSSCEEEEEECSSSHHHHHCSSCT-----------TCEEEEETTEECTTSCHHHHHHHHHHCCC
T ss_pred CccCEEEEeccCC-CCCCcCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 3567776542210 1122689999999999999999 999 99999999999966 5899999988777
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++|.|+|.
T Consensus 90 g~~v~l~v~ 98 (111)
T 2koj_A 90 EGTVSLLVF 98 (111)
T ss_dssp SSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999874
No 189
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.65 E-value=5.3e-08 Score=77.99 Aligned_cols=67 Identities=24% Similarity=0.340 Sum_probs=52.6
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
..+|+.+..... -+..|++|.+|.+++||+++||+. ||+|++|||++|.+ ++++.+++.+
T Consensus 20 ~~~Gf~v~~~~~---~~~~g~~V~~V~~~spA~~aGL~~-----------GD~Il~vng~~v~~~~~~~l~~~l~~---- 81 (94)
T 3kzd_A 20 DTYGFSLSSVEE---DGIRRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ---- 81 (94)
T ss_dssp -CCSEEEEEECS---SSSCEEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHS----
T ss_pred CCcCEEEEecCC---CCcCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC----
Confidence 457777654211 123689999999999999999999 99999999999995 6899998874
Q ss_pred CEEEEEE
Q 014786 410 DEVSCFT 416 (418)
Q Consensus 410 ~~v~l~v 416 (418)
..++++|
T Consensus 82 ~~l~ltV 88 (94)
T 3kzd_A 82 PSLGLLV 88 (94)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 3566665
No 190
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.65 E-value=2.1e-08 Score=79.13 Aligned_cols=70 Identities=21% Similarity=0.264 Sum_probs=56.0
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~g 409 (418)
.+|+.+...... ..+++|.+|.+++||+++| |++ ||+|++|||++| .+..++.+++.....+
T Consensus 14 g~G~~~~~g~~~----~~~~~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~~~~ 78 (90)
T 2q9v_A 14 GFGFRILGGNEP----GEPIYIGHIVPLGAADTDGRLRS-----------GDELISVDGTPVIGKSHQLVVQLMQQAAKQ 78 (90)
T ss_dssp BCCEEEEECSST----TSCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHHHHH
T ss_pred ccCEEEEccccC----CCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCC
Confidence 467766532110 1578999999999999999 999 999999999999 6688999999876656
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++++++|.
T Consensus 79 ~~v~l~v~ 86 (90)
T 2q9v_A 79 GHVNLTVR 86 (90)
T ss_dssp TEEEEEEE
T ss_pred CeEEEEEE
Confidence 78988874
No 191
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.65 E-value=8.8e-08 Score=76.37 Aligned_cols=73 Identities=23% Similarity=0.307 Sum_probs=56.0
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~ 408 (418)
..+|+.+........-...|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++...+.. .
T Consensus 15 ~~lG~~i~~~~~~~~~~~~~~~V~~v~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (97)
T 2iwn_A 15 QGLGITIAGYIGDKKLEPSGIFVKSITKSSAVEHDGRIQI-----------GDQIIAVDGTNLQGFTNQQAVEVLRH--T 81 (97)
T ss_dssp TBSCEEEECCCCC----CCCCEEEEECTTCHHHHHCCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--C
T ss_pred CCCcEEEEccCCCCCCCCCCEEEEEeCCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 468888765321111123799999999999999999 999 999999999999965 566666654 7
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+++.|+|.
T Consensus 82 ~~~v~l~v~ 90 (97)
T 2iwn_A 82 GQTVLLTLM 90 (97)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 899999874
No 192
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.64 E-value=6e-08 Score=79.83 Aligned_cols=69 Identities=22% Similarity=0.301 Sum_probs=58.3
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCc-cccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl-~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+.... +..|++|.+|.+++||+++|| +. ||+|++|||+++.+ ..|+.+++.. .+
T Consensus 13 ~glG~~~~~~~-----~~~~~~V~~v~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 75 (112)
T 1qau_A 13 GGLGFLVKERV-----SKPPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IA 75 (112)
T ss_dssp TBTSEEEEECS-----SSSCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTSCHHHHHHHHHH-SC
T ss_pred CceeEEEEecC-----CCCCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 45788776432 126899999999999999998 99 99999999999999 9999999987 46
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+.+.++|.
T Consensus 76 g~~v~l~v~ 84 (112)
T 1qau_A 76 SETHVVLIL 84 (112)
T ss_dssp SSSEEEEEE
T ss_pred CCcEEEEEE
Confidence 888888764
No 193
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.64 E-value=2.1e-08 Score=82.20 Aligned_cols=55 Identities=24% Similarity=0.237 Sum_probs=45.1
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCHHH--HHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~~d--l~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+..+ ....+. ..+++++++|.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~ 82 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFK--GANGKVSMEVT 82 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCT-----------TCEEEEESSCBCSSSCHHHHHHHHH--SCBSCEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEE
Confidence 689999999999999999 999 99999999999987543 334443 35677888774
No 194
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.64 E-value=5.7e-08 Score=75.72 Aligned_cols=68 Identities=12% Similarity=0.199 Sum_probs=53.1
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~ 410 (418)
.+|+.+...... ..|++|.+|.+++||+++||++ ||+|++|||+++.++ .++...+.. .++
T Consensus 12 ~~G~~l~gg~~~----~~~v~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~ 74 (85)
T 1rgw_A 12 PWGFRLQGGKDF----NMPLTISRITPGSKAAQSQLSQ-----------GDLVVAIDGVNTDTMTHLEAQNKIKS--ASY 74 (85)
T ss_dssp CCCEEECCCGGG----TSCCBEEEECTTSHHHHSSCCC-----------CSBEEEETTEECTTCCHHHHHHHHTT--CSS
T ss_pred ccCEEEEeccCC----CCCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHc--CCC
Confidence 467776532111 1589999999999999999999 999999999999998 677766654 467
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.++|.
T Consensus 75 ~v~l~v~ 81 (85)
T 1rgw_A 75 NLSLTLQ 81 (85)
T ss_dssp CEEEEEE
T ss_pred eEEEEEE
Confidence 7888774
No 195
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.64 E-value=4.4e-08 Score=79.93 Aligned_cols=56 Identities=21% Similarity=0.321 Sum_probs=50.6
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+ +||++ ||+|++|||++|.++.++...+...++|++++++|.
T Consensus 39 ~gv~V~~V~~~spA~-agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~ 94 (107)
T 2h2b_A 39 TSIVISDVLKGGPAE-GQLQE-----------NDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIR 94 (107)
T ss_dssp CCEEEEEECTTSTTB-TTBCT-----------TCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEE
T ss_pred CCEEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEE
Confidence 699999999999999 99999 999999999999999888877665578999999874
No 196
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.64 E-value=7.6e-08 Score=75.93 Aligned_cols=67 Identities=21% Similarity=0.346 Sum_probs=56.3
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhh-cCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~-aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~ 408 (418)
..+|+.+.... ..+++|.+|.+++||++ +||++ ||+|++|||+++. +++++.+++...+
T Consensus 13 ~~lG~~i~~~~------~~~~~I~~V~~gspA~~~agL~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~~- 74 (88)
T 1kwa_A 13 EPMGITLKMNE------LNHCIVARIMHGGMIHRQGTLHV-----------GDEIREINGISVANQTVEQLQKMLREMR- 74 (88)
T ss_dssp SCCCEEEECSC------GGGEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEEGGGSCHHHHHHHHHHCC-
T ss_pred CceeEEEEeCC------CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhcCC-
Confidence 45788776521 15789999999999999 89999 9999999999999 9999999998763
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
+ ++.++|.
T Consensus 75 ~-~v~l~v~ 82 (88)
T 1kwa_A 75 G-SITFKIV 82 (88)
T ss_dssp E-EEEEEEE
T ss_pred C-cEEEEEE
Confidence 5 8888774
No 197
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.64 E-value=3.6e-08 Score=77.97 Aligned_cols=55 Identities=22% Similarity=0.335 Sum_probs=46.7
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHH--HHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~d--l~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.++.+ ....+. +.|+++.++|.
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~ 88 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKP-----------YDRLLQVNHVRTRDFDCCLVVPLIA--ESGNKLDLVIS 88 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHH--TSTTEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCCCEEEEEEE
Confidence 689999999999999999999 99999999999999754 334444 35889988874
No 198
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.63 E-value=6.8e-08 Score=75.92 Aligned_cols=67 Identities=27% Similarity=0.362 Sum_probs=53.4
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~ 410 (418)
.+|+.+..... -.|++|..+ +++||+ +||++ ||+|++|||++|.++ .++.+.+...++|+
T Consensus 15 g~G~~~~~~~~-----~~~~~v~~v-~~spA~-aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~ 76 (88)
T 3bpu_A 15 GFGFTIADSPG-----GGGQRVKQI-VDSPRS-RGLKE-----------GDLIVEVNKKNVQALTHNQVVDMLVESPKGS 76 (88)
T ss_dssp BSSCEEEECTT-----SSSEEEEEC-CC--CC-TTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHTSCTTC
T ss_pred ceeEEEEecCC-----CCcEEEEEe-cCChhH-hCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhCCCCC
Confidence 46777653211 158888887 999999 99999 999999999999997 89999998777899
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.++|.
T Consensus 77 ~v~l~v~ 83 (88)
T 3bpu_A 77 EVTLLVQ 83 (88)
T ss_dssp EEEEEEE
T ss_pred EEEEEEE
Confidence 9999874
No 199
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.63 E-value=7.4e-08 Score=81.34 Aligned_cols=55 Identities=33% Similarity=0.441 Sum_probs=51.8
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.|++|.+|.+++||+++ |+. ||+|++|||++|.++.|+.+++...++|++++++|
T Consensus 25 ~gv~V~~V~~~spA~~a-L~~-----------GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V 79 (125)
T 2hga_A 25 DGVQIDSVVPGSPASKV-LTP-----------GLVIESINGMPTSNLTTYSAALKTISVGEVINITT 79 (125)
T ss_dssp CCEEEEEECSSSGGGGT-SCT-----------TCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE
T ss_pred CceEEEEECCCChHHHh-cCC-----------CCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE
Confidence 79999999999999999 999 99999999999999999999998777899998876
No 200
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.63 E-value=1.9e-08 Score=81.27 Aligned_cols=70 Identities=23% Similarity=0.245 Sum_probs=55.0
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCE
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDE 411 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~ 411 (418)
..+|+.+..... .-.|++|.+|.+++||+++||++ ||+|++|||++|.++.+ .+++...+.+++
T Consensus 21 ~~lG~~~~~~~~----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~-~~~~~~~~~~~~ 84 (101)
T 1uez_A 21 EGLGFSIRGGSE----HGVGIYVSLVEPGSLAEKEGLRV-----------GDQILRVNDKSLARVTH-AEAVKALKGSKK 84 (101)
T ss_dssp TCSSEEEEECTT----TTCCEEEEEECTTSHHHHHTCCS-----------SCCEEEETTEECSSCCH-HHHHHHSSSSSS
T ss_pred CcccEEEeCCCC----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCcCH-HHHHHhhcCCCe
Confidence 456777654221 11689999999999999999999 99999999999999988 446665567788
Q ss_pred EEEEEE
Q 014786 412 VSCFTF 417 (418)
Q Consensus 412 v~l~v~ 417 (418)
+.|+|+
T Consensus 85 v~l~v~ 90 (101)
T 1uez_A 85 LVLSVY 90 (101)
T ss_dssp CCEEEC
T ss_pred EEEEEE
Confidence 877763
No 201
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.62 E-value=3.3e-08 Score=78.16 Aligned_cols=54 Identities=22% Similarity=0.338 Sum_probs=48.9
Q ss_pred cEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 352 VLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 352 ~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
++|.+|.+++||+++||+. ||+|++|||++|.++.|+.+.+... +|++++++|.
T Consensus 6 ~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~ 59 (91)
T 2zpm_A 6 PVLENVQPNSAASXAGLQA-----------GDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALEIE 59 (91)
T ss_dssp CBCSEECTTSHHHHTTCCT-----------TCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEEEE
T ss_pred eEEEEECCCChHHhcCCCC-----------CCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEEEE
Confidence 4688899999999999999 9999999999999999999999875 7888888764
No 202
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.62 E-value=2.9e-08 Score=84.00 Aligned_cols=73 Identities=25% Similarity=0.383 Sum_probs=58.3
Q ss_pred cccCeeeccchhhhhhC-ccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVEQLG-VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~-~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~ 407 (418)
..||+.+........++ ..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++..
T Consensus 27 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~-- 93 (129)
T 2dmz_A 27 QSLGIRIVGYVGTSHTGEASGIYVKSVIPGSAAYHNGHIQV-----------NDKIVAVDGVNIQGFANHDVVEVLRN-- 93 (129)
T ss_dssp CCCCEEEEEECCCSSSCCCCEEEEEEECTTSHHHHHTCCCS-----------SCBEEEETTBCCTTCCHHHHHHHHHH--
T ss_pred CCcCEEEEeecCCcccCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 45666665421111112 2789999999999999999 999 99999999999999 8999999987
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|+.+.|+|.
T Consensus 94 ~~~~v~l~v~ 103 (129)
T 2dmz_A 94 AGQVVHLTLV 103 (129)
T ss_dssp CCSSEEEEEE
T ss_pred CCCeEEEEEE
Confidence 7899998874
No 203
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.62 E-value=9.2e-08 Score=76.38 Aligned_cols=55 Identities=25% Similarity=0.395 Sum_probs=49.6
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.+++.. .|++++++|.
T Consensus 33 ~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 90 (96)
T 1d5g_A 33 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLE 90 (96)
T ss_dssp SCCEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHS--CCSEEEEEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 699999999999999999 999 9999999999999 56888888875 5899998874
No 204
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.62 E-value=6.4e-08 Score=79.36 Aligned_cols=55 Identities=24% Similarity=0.317 Sum_probs=50.2
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+++.. .|+++.++|+
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 101 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVV 101 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEE
Confidence 589999999999999999999 999999999999999 899988876 3888888875
No 205
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.62 E-value=5.2e-08 Score=81.36 Aligned_cols=73 Identities=30% Similarity=0.333 Sum_probs=56.7
Q ss_pred cccCeeeccchhhh-hhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCHH--HHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~-~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~~--dl~~~l~~~~ 407 (418)
..+|+.+....... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.+.. ++..++..
T Consensus 28 ~~lG~~i~~~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~-- 94 (120)
T 2eno_A 28 SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN-- 94 (120)
T ss_dssp SSCSEEEECCTTTCSSSSCCSEEEEEECSSSHHHHSCCSCT-----------TCEEEEETTEECCSCCHHHHHHHHHH--
T ss_pred CCCCEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 57788876522110 1123799999999999999999 999 9999999999999954 77777765
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|++|+|+|.
T Consensus 95 ~g~~v~l~v~ 104 (120)
T 2eno_A 95 AGYAVSLRVQ 104 (120)
T ss_dssp HCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 3889998874
No 206
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.61 E-value=9.8e-08 Score=79.16 Aligned_cols=70 Identities=21% Similarity=0.403 Sum_probs=56.9
Q ss_pred ccccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCC
Q 014786 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCK 407 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~ 407 (418)
.+.+|+.+...... ..|++|.+|.+++||+++| |++ ||+|++|||++| .+..++.+++...
T Consensus 35 ~~~lG~~l~~~~~~----~~~~~V~~V~~gspA~~aG~L~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~~~- 98 (114)
T 2gzv_A 35 QNLIGISIGGGAQY----CPCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQEV- 98 (114)
T ss_dssp TSCCSEEEEECCC------CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC-
T ss_pred CCcEeEEEEeCCCC----CCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 46788887642211 1589999999999999999 999 999999999999 8999999999764
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
++.+.++|.
T Consensus 99 -~~~v~l~v~ 107 (114)
T 2gzv_A 99 -KGEVTIHYN 107 (114)
T ss_dssp -CSEEEEEEE
T ss_pred -CCeEEEEEE
Confidence 456888774
No 207
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.61 E-value=8.3e-08 Score=79.34 Aligned_cols=65 Identities=20% Similarity=0.400 Sum_probs=54.4
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCc-cccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl-~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g 409 (418)
.+|+.+.... .|++|.+|.+++||+++|| ++ ||+|++|||++|. +..++.+++... +
T Consensus 38 ~lG~~i~~~~-------~gv~V~~V~~~spA~~aGll~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~ 97 (113)
T 1va8_A 38 PLGATVRNEM-------DSVIISRIVKGGAAEKSGLLHE-----------GDEVLEINGIEIRGKDVNEVFDLLSDM--H 97 (113)
T ss_dssp CCCEEEEECS-------SSEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--C
T ss_pred ceeEEEEeCC-------CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--C
Confidence 4676664432 6899999999999999999 98 9999999999999 678999999764 4
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.|+|+
T Consensus 98 ~~v~l~v~ 105 (113)
T 1va8_A 98 GTLTFVLI 105 (113)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 68888775
No 208
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.61 E-value=5.1e-08 Score=80.66 Aligned_cols=55 Identities=29% Similarity=0.505 Sum_probs=50.4
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+. .++.+.+.. .|++++|+|+
T Consensus 38 ~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 94 (114)
T 2edz_A 38 DGHLIRVIEEGSPAEKAGLLD-----------GDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVL 94 (114)
T ss_dssp CSCEEECCCTTCTTGGGTCCT-----------TCEEEEESSSBCSSSCHHHHHHHHHH--TCSEEEEEEE
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEE
Confidence 689999999999999999999 999999999999985 888888875 4999999875
No 209
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.60 E-value=8.4e-08 Score=79.03 Aligned_cols=56 Identities=25% Similarity=0.230 Sum_probs=49.1
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++||+. ||+|++|||++|. +.+|+.+++... .+++++++|+
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~-----------GD~Il~VnG~~v~~~~~~dv~~~i~~~-~~~~v~l~V~ 101 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGARE-----------GDYIVSIQLVDCKWLTLSEVMKLLKSF-GEDEIEMKVV 101 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-TTSCEEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEE
Confidence 578999999999999999999 9999999999999 669999988753 4556888875
No 210
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=1e-07 Score=75.48 Aligned_cols=55 Identities=25% Similarity=0.347 Sum_probs=48.2
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||+. ||+|++|||++|.+ ..++.+++.. .++++.++|+
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 80 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVW 80 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 578999999999999999999 99999999999995 5788888875 4678888774
No 211
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.60 E-value=6.5e-08 Score=82.25 Aligned_cols=74 Identities=20% Similarity=0.300 Sum_probs=59.0
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..||+.+...... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++...++
T Consensus 48 ~~lG~~i~gg~~~-~~~~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~~~ 115 (131)
T 1wfg_A 48 AMLGLKVVGGKMT-ESGRLCAFITKVKKGSLADTVGHLRP-----------GDEVLEWNGRLLQGATFEEVYNIILESKP 115 (131)
T ss_dssp TTTTEEEEEEEEC-SSSCEEEEEEEECTTSHHHHTSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHTSS
T ss_pred CCCCEEEecCccC-CCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCC
Confidence 4567666431100 0122589999999999999999 999 99999999999976 5899999998888
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++|+|+|.
T Consensus 116 g~~v~l~v~ 124 (131)
T 1wfg_A 116 EPQVELVVS 124 (131)
T ss_dssp SSEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999875
No 212
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.59 E-value=6e-08 Score=80.21 Aligned_cols=54 Identities=26% Similarity=0.353 Sum_probs=49.9
Q ss_pred CcEEEecCCCChhhh-cCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 351 GVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 351 G~~V~~v~~~~pa~~-aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+++|.+|.+++||++ +||++ ||+|++|||++|.+ ..++.+++.. .|+.+.|+|.
T Consensus 44 ~~~V~~V~~~spA~~~agL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 100 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKV-----------GDRILAVNGQSIINMPHADIVKLIKD--AGLSVTLRII 100 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCT-----------TCBEEEETTBCTTTSCHHHHHHHHHH--TTTEEEEEEC
T ss_pred CeEEEEECCCChHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 679999999999999 99999 99999999999999 5999999986 7999999874
No 213
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.59 E-value=1.2e-07 Score=75.29 Aligned_cols=67 Identities=24% Similarity=0.395 Sum_probs=54.9
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~g 409 (418)
-||+.+.... .-.+++|.+|.+++||+++| |++ ||+|++|||++| .+.+++.+++... +
T Consensus 16 ~lG~~i~~~~-----~~~~~~V~~v~~gspA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~ 77 (93)
T 3o46_A 16 PLGATIKKDE-----QTGAIIVARIMRGGAADRSGLIHV-----------GDELREVNGIPVEDKRPEEIIQILAQS--Q 77 (93)
T ss_dssp CCCEEEEECT-----TTCCEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEESTTSCHHHHHHHHHHC--C
T ss_pred CccEEEEecC-----CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--C
Confidence 4666664421 11688999999999999999 999 999999999999 8899999999764 3
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|+
T Consensus 78 ~~v~l~v~ 85 (93)
T 3o46_A 78 GAITFKII 85 (93)
T ss_dssp EEEEEEEE
T ss_pred CeEEEEEE
Confidence 48888875
No 214
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.58 E-value=4.8e-08 Score=77.96 Aligned_cols=67 Identities=30% Similarity=0.452 Sum_probs=52.4
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
.+|+.+..... ..|++|.+|.++|||+++| |++ ||+|++|||++|.+. .+....+.. .|
T Consensus 17 ~lG~~~~~~~~-----~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g 78 (95)
T 2vwr_A 17 QLGIKLVRRTD-----EPGVFILDLLEGGLAAQDGRLSS-----------NDRVLAINGHDLKYGTPELAAQIIQA--SG 78 (95)
T ss_dssp CCCEEEEECSS-----SCSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CC
T ss_pred cccEEEEeccC-----CCCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 46766643211 1689999999999999999 999 999999999999875 455555543 58
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++++++|.
T Consensus 79 ~~v~l~v~ 86 (95)
T 2vwr_A 79 ERVNLTIA 86 (95)
T ss_dssp SEEEEEEE
T ss_pred CEEEEEEE
Confidence 99999874
No 215
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.58 E-value=6.7e-08 Score=78.19 Aligned_cols=67 Identities=25% Similarity=0.457 Sum_probs=55.2
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~ 410 (418)
.+|+.+.... ...|++|.+|.+++||+++||++ ||+|++|||++|.+. .++.+.+.. .|+
T Consensus 18 g~G~~l~~~~-----~~~g~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~ 79 (102)
T 2d90_A 18 GYGFYLRAGP-----EQKGQIIKDIEPGSPAEAAGLKN-----------NDLVVAVNGKSVEALDHDGVVEMIRK--GGD 79 (102)
T ss_dssp SSSCEEEECS-----SSSSEEEECCCTTSTTTTTTCCT-----------TCEEEEESSCBCTTSCHHHHHHHHHH--STT
T ss_pred CccEEEEeec-----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCC
Confidence 4677665421 12689999999999999999999 999999999999984 788888876 488
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.++|+
T Consensus 80 ~v~l~v~ 86 (102)
T 2d90_A 80 QTTLLVL 86 (102)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 9998874
No 216
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.58 E-value=6.7e-08 Score=87.60 Aligned_cols=75 Identities=19% Similarity=0.225 Sum_probs=60.6
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~ 408 (418)
.-+|+.+.........+..|++|.+|.+++||+++| |+. ||+|++|||++|. ++.++.+++...++
T Consensus 18 ~glG~~i~~~~~~~~~~~~~~~V~~v~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~ 86 (196)
T 1p1d_A 18 TGFGIQLQGSVFATETLSSPPLISYIEADSPAERCGVLQI-----------GDRVMAINGIPTEDSTFEEANQLLRDSSI 86 (196)
T ss_dssp TBCCCEEEECSSCSSSCSCSEEEEECCTTSHHHHTSCCCS-----------SCCEEEETTBCSTTSCHHHHHHHHHTCCS
T ss_pred CccCEEEeCCcCCCCCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 456666654321111233689999999999999999 999 9999999999999 67999999998888
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++++++|.
T Consensus 87 g~~v~l~v~ 95 (196)
T 1p1d_A 87 TSKVTLEIE 95 (196)
T ss_dssp SSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 999999874
No 217
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.58 E-value=4.2e-08 Score=83.02 Aligned_cols=72 Identities=21% Similarity=0.275 Sum_probs=56.1
Q ss_pred ccCeeeccc--hhhhhhCc---cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHh
Q 014786 333 ILGIKFAPD--QSVEQLGV---SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILD 404 (418)
Q Consensus 333 ~lGv~~~~~--~~~~~~~~---~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~ 404 (418)
.||+.+... ..++.+++ .|++|.+|.+++||+++| |++ ||+|++|||++| .+..++.+++.
T Consensus 43 ~lG~~i~~~~~~~~~~~g~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~ 111 (128)
T 1nf3_C 43 PLGFYIRDGSSVRVTPHGLEKVPGIFISRLVPGGLAQSTGLLAV-----------NDEVLEVNGIEVSGKSLDQVTDMMI 111 (128)
T ss_dssp CCCEEEEEEEEEEEETTEEEEEEEEEEEEECTTCHHHHHTCCCT-----------TCEEEEETTEESTTCCHHHHHHHHH
T ss_pred CccEEEEccccccccccccCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH
Confidence 456665532 11233332 689999999999999999 898 999999999999 77899999997
Q ss_pred cCCCCCEEEEEEE
Q 014786 405 QCKVGDEVSCFTF 417 (418)
Q Consensus 405 ~~~~g~~v~l~v~ 417 (418)
. .++.|.|+|+
T Consensus 112 ~--~~~~v~l~v~ 122 (128)
T 1nf3_C 112 A--NSRNLIITVR 122 (128)
T ss_dssp H--TTTSEEEEEE
T ss_pred c--CCCeEEEEEE
Confidence 4 4667888874
No 218
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.57 E-value=9.4e-08 Score=75.42 Aligned_cols=69 Identities=26% Similarity=0.285 Sum_probs=52.9
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+...... ..|++|.+|.+++||+++ ||++ ||+|++|||++|.+ ..++...+.. .
T Consensus 16 ~~lG~~i~~~~~~----~~g~~V~~V~~~spA~~aggl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~ 78 (90)
T 1qav_A 16 GGLGISIKGGREN----KMPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKK--T 78 (90)
T ss_dssp TCCCEEEEEEGGG----TEEEEEEEECTTSHHHHTTCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--C
T ss_pred CCcCEEEEcccCC----CCCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 4566666532111 158999999999999999 9999 99999999999986 4566666654 4
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++++++|.
T Consensus 79 ~~~v~l~v~ 87 (90)
T 1qav_A 79 GKEVVLEVK 87 (90)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 888988874
No 219
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.57 E-value=8.7e-08 Score=81.15 Aligned_cols=57 Identities=25% Similarity=0.345 Sum_probs=52.2
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |+. ||+|++|||++|.+ ..++.+++...++|++|+|+|.
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 102 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMET-----------GDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELC 102 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEE
Confidence 578999999999999999 999 99999999999985 6799999998877999999874
No 220
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.57 E-value=9.5e-08 Score=79.54 Aligned_cols=69 Identities=28% Similarity=0.365 Sum_probs=54.1
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCE
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDE 411 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~ 411 (418)
.+|+.+..... -.|++|.+|.+++||+++| |++ ||+|++|||++|.++.+.........+|++
T Consensus 26 glG~~l~~~~~-----~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~~~~ 89 (119)
T 1tp5_A 26 GLGFNIVGGED-----GEGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKNAGQT 89 (119)
T ss_dssp CCCEEEEECGG-----GCCEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHTSCSE
T ss_pred CccEEEecCCC-----CCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCe
Confidence 36777754321 1689999999999999999 999 999999999999998655444333347899
Q ss_pred EEEEEE
Q 014786 412 VSCFTF 417 (418)
Q Consensus 412 v~l~v~ 417 (418)
+.++|.
T Consensus 90 v~l~v~ 95 (119)
T 1tp5_A 90 VTIIAQ 95 (119)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 998874
No 221
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.56 E-value=6.2e-08 Score=75.29 Aligned_cols=55 Identities=20% Similarity=0.286 Sum_probs=48.4
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+.+.. .+++++++|.
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 79 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRA-----------GDQILAVNEINVKKASHEDVVKLIGK--CSGVLHMVIA 79 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCT-----------TCEEEEETTEECSSCCHHHHHHHHTT--CSSCEEEEEE
T ss_pred CCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEE
Confidence 478999999999999999999 999999999999999 888888864 3677888774
No 222
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.56 E-value=1.1e-07 Score=75.77 Aligned_cols=55 Identities=16% Similarity=0.198 Sum_probs=47.7
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++||++ ||+|++|||++|.++ .++...+.. .|+++.++|.
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 88 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCP-----------GDLIQAINGESTELMTHLEAQNRIKG--CHDHLTLSVS 88 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCT-----------TCEEEEETTEETTTCCHHHHHHHHHT--CCSCEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 578999999999999999999 999999999999985 566666654 6888888874
No 223
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.55 E-value=1.4e-07 Score=76.21 Aligned_cols=73 Identities=25% Similarity=0.253 Sum_probs=56.4
Q ss_pred cccCeeeccchhhh-hhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~-~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~ 407 (418)
..+|+.+....... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++..
T Consensus 15 ~glG~~i~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~-- 81 (102)
T 2i1n_A 15 SGLGFSIAGGIDNPHVPDDPGIFITKIIPGGAAAMDGRLGV-----------NDCVLRVNEVDVSEVVHSRAVEALKE-- 81 (102)
T ss_dssp TBTSEEEEECTTSCSSTTCCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHH--
T ss_pred CcCCEEEEcccCCCCcCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 35777775421110 0123699999999999999999 999 99999999999987 6777777765
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|+++.|+|.
T Consensus 82 ~g~~v~l~v~ 91 (102)
T 2i1n_A 82 AGPVVRLVVR 91 (102)
T ss_dssp SCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 5899999874
No 224
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.54 E-value=3.6e-08 Score=83.37 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=58.8
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcC--
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC-- 406 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~-- 406 (418)
..||+.+.........+..|++|.+|.+++||+++| |++ ||+|++|||+++.+ ..++.++|...
T Consensus 37 ~glG~~i~~~~~~~~~~~~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 105 (127)
T 1wg6_A 37 AGLGVSLKGNKSRETGTDLGIFIKSIIHGGAAFKDGRLRM-----------NDQLIAVNGETLLGKSNHEAMETLRRSMS 105 (127)
T ss_dssp TCCCCEEEEEEETTTTEEEEEEEEECCSSSSTHHHHTSCS-----------CCBEEEETTEESTTSCHHHHHHHHHHHHH
T ss_pred CccCeEEecccCCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhc
Confidence 567777764321111112589999999999999999 999 99999999999988 55888888865
Q ss_pred ---CCCCEEEEEEE
Q 014786 407 ---KVGDEVSCFTF 417 (418)
Q Consensus 407 ---~~g~~v~l~v~ 417 (418)
++|++|+|+|+
T Consensus 106 ~~g~~~~~v~l~v~ 119 (127)
T 1wg6_A 106 MEGNIRGMIQLVIL 119 (127)
T ss_dssp HHHHHTCEEEEEEE
T ss_pred cccCCCCEEEEEEE
Confidence 46899999885
No 225
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.54 E-value=4.3e-08 Score=90.07 Aligned_cols=57 Identities=30% Similarity=0.462 Sum_probs=52.7
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCC-cEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILG-DIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~G-DiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||++|||++ | |+|++|||++|.++.++...+....+|++++++|+
T Consensus 16 ~G~~V~~V~~~SpA~~AGL~~-----------G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~ 73 (209)
T 3rle_A 16 EGYHVLRVQENSPGHRAGLEP-----------FFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIY 73 (209)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEE
T ss_pred CEEEEEEECCCCHHHHCCCCc-----------CCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEE
Confidence 799999999999999999999 9 99999999999999998877776678999999875
No 226
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.54 E-value=2.7e-07 Score=76.06 Aligned_cols=68 Identities=25% Similarity=0.385 Sum_probs=54.0
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
.+|+.+...... ..|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++...+.. .|
T Consensus 36 glG~~l~~~~~~----~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g 98 (112)
T 2r4h_A 36 GFGFSLRGGREY----NMDLYVLRLAEDGPAERSGKMRI-----------GDEILEINGETTKNMKHSRAIELIKN--GG 98 (112)
T ss_dssp BTSEEEEECGGG----TCCEEEEEECTTSHHHHTTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TT
T ss_pred ccCEEEeccccC----CCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 477776532111 1689999999999999999 999 999999999999774 677777764 58
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++++|+|.
T Consensus 99 ~~v~l~v~ 106 (112)
T 2r4h_A 99 RRVRLFLK 106 (112)
T ss_dssp TEEEEEEE
T ss_pred CeEEEEEE
Confidence 89998874
No 227
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.54 E-value=1.2e-07 Score=77.18 Aligned_cols=72 Identities=24% Similarity=0.222 Sum_probs=53.8
Q ss_pred ccCeeeccchh-hhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 333 ILGIKFAPDQS-VEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 333 ~lGv~~~~~~~-~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
.+|+.+..... ....+-.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++...+.. .
T Consensus 15 glG~~i~gg~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (105)
T 2awx_A 15 GLGFSIAGGVGNQHIPGDNSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNSVSLEEVTHEEAVTALKN--T 81 (105)
T ss_dssp BSSEEEEECBTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHS--C
T ss_pred CCCEEEeCccCCCCCCCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 56777653211 011122699999999999999999 999 99999999999976 4566666654 4
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+.+.|+|.
T Consensus 82 ~~~v~l~v~ 90 (105)
T 2awx_A 82 SDFVYLKVA 90 (105)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 889998874
No 228
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.54 E-value=4.1e-08 Score=82.03 Aligned_cols=55 Identities=18% Similarity=0.267 Sum_probs=51.2
Q ss_pred cCcEEEecCC--CChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPP--NGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~--~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+ ++||+++||++ ||+|++|||++|.++ .|+.+++... |+++.|+|.
T Consensus 44 ~gv~V~~V~~~~~spA~~aGL~~-----------GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~v~ 102 (118)
T 2yub_A 44 TTVQVKEVNRMHISPNNRNAIHP-----------GDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLLIE 102 (118)
T ss_dssp CEEEEEECCTTTSCTTHHHHCCT-----------TCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEEEE
T ss_pred CcEEEEEecCCCCChHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEEEE
Confidence 7999999999 99999999999 999999999999999 9999999875 888888874
No 229
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.54 E-value=9.8e-07 Score=74.53 Aligned_cols=84 Identities=14% Similarity=0.151 Sum_probs=58.9
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCC---------CcEEEEEEEEEcC-------CCCeEEEEecCCC---C
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (418)
...|.|.+|+++ +|||+|||+.+ ..+.|.+.. ++.+..+-+..++ .+|||||+++.+. .
T Consensus 24 ~~~CgGsLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (131)
T 1yph_C 24 FHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 101 (131)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CEEEEEEEeeCC-EEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCC
Confidence 357999999987 99999999976 444555431 2334455444443 4699999998764 2
Q ss_pred CCcccccCCCC-CCCCCCEEEEEeCC
Q 014786 212 KLRPIPIGVSA-DLLVGQKVYAIGNP 236 (418)
Q Consensus 212 ~~~~~~l~~~~-~~~~G~~V~~vG~p 236 (418)
...|+.|.... .+..|+.+++.||.
T Consensus 102 ~v~picLp~~~~~~~~g~~~~v~GWG 127 (131)
T 1yph_C 102 TVSAVCLPSASDDFAAGTTCVTTGWG 127 (131)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESC
T ss_pred cCcceECCCcccCCCCCCEEEEEcCC
Confidence 46677776443 35689999999985
No 230
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=1e-07 Score=77.53 Aligned_cols=72 Identities=25% Similarity=0.382 Sum_probs=56.6
Q ss_pred ccCeeeccchhhh--hhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 014786 333 ILGIKFAPDQSVE--QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (418)
Q Consensus 333 ~lGv~~~~~~~~~--~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~ 407 (418)
.+|+.+....... ..+-.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++...
T Consensus 19 glG~~l~~g~~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~- 86 (105)
T 1wha_A 19 GLGFSIAGGKGSTPYRAGDAGIFVSRIAEGGAAHRAGTLQV-----------GDRVLSINGVDVTEARHDHAVSLLTAA- 86 (105)
T ss_dssp CCSCEEECCTTSCCSSTTCCSCEEEECCTTSSHHHHSSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHTSC-
T ss_pred ccCEEEEeccCCCcccCCCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC-
Confidence 3777765422110 0123699999999999999999 999 99999999999988 78888888753
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
|+.++|+|.
T Consensus 87 -g~~v~l~v~ 95 (105)
T 1wha_A 87 -SPTIALLLE 95 (105)
T ss_dssp -CSCEEEEEE
T ss_pred -CCeEEEEEE
Confidence 888988874
No 231
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.53 E-value=1.4e-07 Score=76.83 Aligned_cols=55 Identities=25% Similarity=0.319 Sum_probs=49.8
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
++++|.+|.+++||+++||+. ||+|++|||++|. +..++.+++.. .|+++.|+|.
T Consensus 43 p~~~V~~v~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 99 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRK-----------GDRILEVNGVNVEGATHKQVVDLIRA--GEKELILTVL 99 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEE
Confidence 566799999999999999999 9999999999999 78999999985 5899999875
No 232
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.53 E-value=1.1e-07 Score=77.88 Aligned_cols=72 Identities=22% Similarity=0.359 Sum_probs=56.1
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcC--
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC-- 406 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~-- 406 (418)
..||+.+..... ..+..|++|.+|.+++||+++| |++ ||+|++|||+++.+ .+++.+++...
T Consensus 17 ~~lG~~i~g~~~--~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~ 83 (108)
T 3cbz_A 17 NFLGISIVGQSN--ERGDGGIYIGSIMKGGAVAADGRIEP-----------GDMLLQVNDMNFENMSNDDAVRVLRDIVH 83 (108)
T ss_dssp CCCCEEEEEECS--STTCCEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEETTSCCHHHHHHHHHHHHT
T ss_pred CccCEEEEcCcC--CCCCCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccc
Confidence 346666654211 1123789999999999999999 999 99999999999999 89999999865
Q ss_pred CCCCEEEEEEE
Q 014786 407 KVGDEVSCFTF 417 (418)
Q Consensus 407 ~~g~~v~l~v~ 417 (418)
+. +.|+|+|.
T Consensus 84 ~~-~~v~l~v~ 93 (108)
T 3cbz_A 84 KP-GPIVLTVA 93 (108)
T ss_dssp SS-SCEEEEEE
T ss_pred CC-CeEEEEEE
Confidence 33 45888774
No 233
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=2.2e-07 Score=74.48 Aligned_cols=55 Identities=31% Similarity=0.501 Sum_probs=48.8
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+ +|+++||++ ||+|++|||++|.+. .++.++|+..++|+++.|+|.
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~ 88 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCE-----------GDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIH 88 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCS-----------SCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEE
T ss_pred CCEEEEEEec--ccccCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEE
Confidence 4789999988 378999999 999999999999875 899999998777999999874
No 234
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.53 E-value=1.9e-07 Score=77.77 Aligned_cols=73 Identities=23% Similarity=0.214 Sum_probs=57.0
Q ss_pred cccCeeeccchhhh-hhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~-~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~ 407 (418)
..+|+.+....... ..+-.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.+++..
T Consensus 35 ~glG~~i~gg~~~~~~~~~~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~-- 101 (117)
T 2byg_A 35 KGLGFSIAGGVGNQHIPGDNSIYVTKIIDGGAAQKDGRLQV-----------GDRLLMVNNYSLEEVTHEEAVAILKN-- 101 (117)
T ss_dssp TBSSEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--
T ss_pred CCcCEEEEcccCCCCccCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--
Confidence 35677765321100 1122689999999999999999 999 9999999999999 77888888875
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|++|+|+|.
T Consensus 102 ~g~~v~l~v~ 111 (117)
T 2byg_A 102 TSEVVYLKVG 111 (117)
T ss_dssp CCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 4899999874
No 235
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.52 E-value=1.4e-07 Score=79.50 Aligned_cols=68 Identities=21% Similarity=0.289 Sum_probs=56.7
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~ 410 (418)
.+|+.+.... +..|++|.+|.+++||+++||+. ||+|++|||++|.+ ..++.+++... +|+
T Consensus 21 g~G~~l~~~~-----~~~gv~V~~V~~~spA~~aGl~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~ 83 (128)
T 2kjd_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG-GDE 83 (128)
T ss_dssp SCCEEEEECS-----SSCSEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTT-CSE
T ss_pred cccEEEEecC-----CCCCEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCC
Confidence 3666654322 11589999999999999999999 99999999999999 99999999876 788
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
.+.++|.
T Consensus 84 ~~~l~v~ 90 (128)
T 2kjd_A 84 TKLLVVD 90 (128)
T ss_dssp EEEEEEC
T ss_pred EEEEEEE
Confidence 8888763
No 236
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.52 E-value=1.1e-07 Score=78.01 Aligned_cols=71 Identities=24% Similarity=0.372 Sum_probs=53.8
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
.+|+.+...... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++...+.. .|
T Consensus 20 glG~~l~~g~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 85 (110)
T 1um1_A 20 GLGMGLIDGMHT-HLGAPGLYIQTLLPGSPAAADGRLSL-----------GDRILEVNGSSLLGLGYLRAVDLIRH--GG 85 (110)
T ss_dssp CCCEEEEETTTS-TTCCSSEEEEEECTTSHHHHHSCCCT-----------TCEEEEESSCBCSSCCHHHHHHHHHT--CC
T ss_pred ccCEEEeCCcCC-CCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 466665432111 1123799999999999999999 999 99999999999975 5666666654 48
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.|+|.
T Consensus 86 ~~v~l~v~ 93 (110)
T 1um1_A 86 KKMRFLVA 93 (110)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 99999874
No 237
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.52 E-value=1.3e-07 Score=77.70 Aligned_cols=66 Identities=29% Similarity=0.490 Sum_probs=54.9
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g 409 (418)
.+|+.+..... .|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++.. .|
T Consensus 27 ~lG~~l~~~~~------~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~--~g 87 (111)
T 2dlu_A 27 GLGFGIVGGKT------SGVVVRTIVPGGLADRDGRLQT-----------GDHILKIGGTNVQGMTSEQVAQVLRN--CG 87 (111)
T ss_dssp CCCEEEECCSS------SSBEEEEECTTSSHHHHTCCCS-----------SCEEEEESSCCCTTSCHHHHHHHHHH--HC
T ss_pred ccCEEEeccCC------CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CC
Confidence 57777754221 589999999999999999 999 99999999999994 5888888875 48
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.|+|.
T Consensus 88 ~~v~l~v~ 95 (111)
T 2dlu_A 88 NSVRMLVA 95 (111)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 89988874
No 238
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.51 E-value=1.1e-07 Score=78.43 Aligned_cols=56 Identities=29% Similarity=0.352 Sum_probs=50.5
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++||+. ||+|++|||++|. +++|+.+++... .++++.|+|+
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~-----------GD~Il~InG~~v~~~~~~d~~~~i~~~-~~~~v~l~V~ 93 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKE-----------GDYIVSIQGVDCKWLTVSEVMKLLKSF-GGEEVEMKVV 93 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCT-----------TCEEEEETTEECSSCCHHHHHHHHHHT-TTSEECEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEE
Confidence 478999999999999999999 9999999999999 999999999865 4778888875
No 239
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=1.3e-07 Score=78.58 Aligned_cols=54 Identities=19% Similarity=0.327 Sum_probs=49.7
Q ss_pred CcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 351 GVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 351 G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+++|.+|.+++||+++| |++ ||+|++|||++| .+.+++.+++.. .|+.|+|+|.
T Consensus 43 ~~~V~~V~~~spA~~aG~l~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 99 (117)
T 1v62_A 43 VITIDRIKPASVVDRSGALHP-----------GDHILSIDGTSMEHCSLLEATKLLAS--ISEKVRLEIL 99 (117)
T ss_dssp EEEEEECCTTSHHHHHTCCCT-----------TCBEEEETTEETTSCCHHHHHHHHHS--CSSEEEEEEC
T ss_pred CEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEE
Confidence 49999999999999999 999 999999999999 779999999984 6999999874
No 240
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.51 E-value=7.5e-08 Score=78.23 Aligned_cols=54 Identities=22% Similarity=0.372 Sum_probs=49.4
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|. +..++.+++... +++++|+|
T Consensus 48 ~~~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v 103 (104)
T 2z17_A 48 MFTLICKIQEDSPAHCAGLQA-----------GDVLANINGVSTEGFTYKQVVDLIRSS--GNLLTIET 103 (104)
T ss_dssp CCEEEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCHHHHHHHHHHT--TTEEEEEC
T ss_pred CCeEEEEECCCChHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEE
Confidence 689999999999999999999 9999999999999 889999999876 44888876
No 241
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.51 E-value=1.5e-07 Score=76.26 Aligned_cols=71 Identities=20% Similarity=0.340 Sum_probs=55.2
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+...... .+-.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++...+.. .
T Consensus 22 ~g~G~~l~~~~~~--~~~~~v~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 86 (104)
T 2djt_A 22 AGFGLTLGGGRDV--AGDTPLAVRGLLKDGPAQRCGRLEV-----------GDLVLHINGESTQGLTHAQAVERIRA--G 86 (104)
T ss_dssp SSCCEEEECCEET--TEECCCEEEEECTTCHHHHHCSCCT-----------TCBEEEETTEECTTCCHHHHHHHHHH--T
T ss_pred CCccEEEEeccCC--CCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 3566666542110 112689999999999999999 999 99999999999988 5677777765 5
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+++.|+|.
T Consensus 87 g~~v~l~v~ 95 (104)
T 2djt_A 87 GPQLHLVIR 95 (104)
T ss_dssp CSEEEEEEC
T ss_pred CCeEEEEEE
Confidence 899999874
No 242
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.51 E-value=2.1e-07 Score=77.69 Aligned_cols=55 Identities=20% Similarity=0.448 Sum_probs=50.3
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||+++. +..++.+++.. .+++|+|+|.
T Consensus 53 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~v~ 110 (118)
T 3b76_A 53 LPIYVISVEPGGVISRDGRIKT-----------GDILLNVDGVELTEVSRSEAVALLKR--TSSSIVLKAL 110 (118)
T ss_dssp CCEEEEEECTTSHHHHHCSSCT-----------TCEEEEETTEEGGGSCHHHHHHHHHS--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 689999999999999999 999 9999999999999 88899999985 4788998874
No 243
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.50 E-value=9.3e-08 Score=80.59 Aligned_cols=69 Identities=22% Similarity=0.301 Sum_probs=58.1
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcCc-cccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGL-LSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl-~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+.... +..|++|.+|.+++||+++|| ++ ||+|++|||++|.+ ..++.+++.. .+
T Consensus 20 ~glG~~~~~~~-----~~~~~~V~~V~~~spA~~aGll~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~-~~ 82 (127)
T 1b8q_A 20 GGLGFLVKERV-----SKPPVIISDLIRGGAAEQSGLIQA-----------GDIILAVNDRPLVDLSYDSALEVLRG-IA 82 (127)
T ss_dssp SCCSCCEEECT-----TSSCEEECCCSSSSSHHHHSSCCT-----------TTCCCEETTEECSSSCHHHHHHHHHS-CC
T ss_pred CcEeEEEEecC-----CCCCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh-CC
Confidence 46777765432 125899999999999999999 99 99999999999999 9999999986 47
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+.+.++|.
T Consensus 83 g~~v~l~v~ 91 (127)
T 1b8q_A 83 SETHVVLIL 91 (127)
T ss_dssp SSCEEEEEE
T ss_pred CCeEEEEEE
Confidence 889988874
No 244
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.50 E-value=1.1e-07 Score=75.28 Aligned_cols=68 Identities=29% Similarity=0.344 Sum_probs=54.0
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~ 408 (418)
..+|+.+.... +..|++|.+|.+++||+++| |++ ||+|++|||+++.+. .++...+.. .
T Consensus 16 ~~lG~~~~~~~-----~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 77 (92)
T 2qg1_A 16 KGLGLSIVGKR-----NDTGVFVSDIVKGGIADADGRLMQ-----------GDQILMVNGEDVRNATQEAVAALLKC--S 77 (92)
T ss_dssp SCCSEEEECCS-----SSCSCEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--C
T ss_pred CcccEEEEecc-----CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 35677765421 12699999999999999999 999 999999999999874 666666654 5
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++++++|.
T Consensus 78 ~~~v~l~v~ 86 (92)
T 2qg1_A 78 LGTVTLEVG 86 (92)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 888998874
No 245
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=1.2e-07 Score=79.98 Aligned_cols=69 Identities=23% Similarity=0.291 Sum_probs=53.6
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEE
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 412 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v 412 (418)
.+|+.+.... .++ .|++|.+|.+++||+++||++ ||+|++|||++|.+..+ .+++...+.++.+
T Consensus 33 ~lG~~~~~~~---~~~-~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~-~~~~~~~~~~~~v 96 (128)
T 1uf1_A 33 SLGLTIRGGA---EYG-LGIYITGVDPGSEAEGSGLKV-----------GDQILEVNGRSFLNILH-DEAVRLLKSSRHL 96 (128)
T ss_dssp CCCEEEECCT---TTT-CCCEEEEECTTCHHHHHTCCT-----------TCEEEEETTEECSSCCH-HHHHHHHTTCSEE
T ss_pred ccCEEEECcc---cCC-CCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCH-HHHHHHHhcCCeE
Confidence 4576665421 112 589999999999999999999 99999999999999766 5555544557888
Q ss_pred EEEEE
Q 014786 413 SCFTF 417 (418)
Q Consensus 413 ~l~v~ 417 (418)
.|+|.
T Consensus 97 ~l~v~ 101 (128)
T 1uf1_A 97 ILTVK 101 (128)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 88874
No 246
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.49 E-value=9.5e-08 Score=78.03 Aligned_cols=55 Identities=20% Similarity=0.263 Sum_probs=48.1
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++.. .|+++.|+|.
T Consensus 40 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 97 (107)
T 1wf8_A 40 LGIFVKTVTEGGAAQRDGRIQV-----------NDQIVEVDGISLVGVTQNFAATVLRN--TKGNVRFVIG 97 (107)
T ss_dssp EEEEEEEECTTCHHHHHCSSCT-----------TCBEEEETTEECBSCCHHHHHHHHHH--CCSEEEEEEE
T ss_pred CCEEEEEeCCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEE
Confidence 799999999999999999 999 99999999999986 5566667765 4899999874
No 247
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.49 E-value=1.5e-07 Score=76.22 Aligned_cols=67 Identities=28% Similarity=0.397 Sum_probs=51.6
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
-+|+.+..... -.|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++...+.. .|
T Consensus 23 glG~~~~~~~~-----~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~ 84 (104)
T 3i4w_A 23 GLGFNIVGGEX-----GEGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKN--AG 84 (104)
T ss_dssp BTSEEEEECC------CCCEEEEEECTTSHHHHHCCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHT--SC
T ss_pred ccCEEEECCCC-----CCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 36766654221 1589999999999999999 999 999999999999654 455555544 68
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+++.++|.
T Consensus 85 ~~v~l~v~ 92 (104)
T 3i4w_A 85 QTVTIIAQ 92 (104)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 89988874
No 248
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.48 E-value=2.4e-07 Score=74.63 Aligned_cols=73 Identities=30% Similarity=0.343 Sum_probs=55.4
Q ss_pred cccCeeeccchhhh-hhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVE-QLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~-~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~ 407 (418)
..+|+.+....... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|.++ .++..++..
T Consensus 18 ~~lG~~l~~g~~~~~~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~-- 84 (101)
T 2jik_A 18 SGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQE-----------GDKILSVNGQDLKNLLHQDAVDLFRN-- 84 (101)
T ss_dssp TCCCEEEEECTTSCSBTTBCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHT--
T ss_pred CCCCEEEeccccCCCccCCCCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--
Confidence 45677765421110 0122699999999999999999 999 999999999999885 677777764
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|+++.++|.
T Consensus 85 ~g~~v~l~v~ 94 (101)
T 2jik_A 85 AGYAVSLRVQ 94 (101)
T ss_dssp CCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 4888988874
No 249
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.48 E-value=2.6e-07 Score=73.23 Aligned_cols=55 Identities=27% Similarity=0.364 Sum_probs=47.5
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+.+... +++++++|.
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~--~~~v~l~v~ 87 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKR-----------GDQLLSVNGVSVEGEQHEKAVELLKAA--QGSVKLVVR 87 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCT-----------TCBEEEETTEECTTSCHHHHHHHHHHC--CSEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEE
Confidence 689999999999999996 999 99999999999995 57888888653 568888764
No 250
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.48 E-value=4.3e-07 Score=71.04 Aligned_cols=55 Identities=29% Similarity=0.449 Sum_probs=47.4
Q ss_pred cCcEEEecCCCChhhh-cCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~-aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||++ +||++ ||+|++|||+++. +..++...+.. .++++.++|.
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 85 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVV 85 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCT-----------TEEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 5789999999999999 79999 9999999999995 45788888864 5778888774
No 251
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.48 E-value=3.2e-07 Score=73.45 Aligned_cols=70 Identities=23% Similarity=0.356 Sum_probs=54.1
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+..... ....|++|.+|.+++||+++| |++ ||+|++|||+++.+ ..++...+.. .
T Consensus 15 ~~lG~~l~~~~~---~~~~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 78 (98)
T 2opg_A 15 TGLGLSIVGGSD---TLLGAIIIHEVYEEGAACKDGRLWA-----------GDQILEVNGIDLRKATHDEAINVLRQ--T 78 (98)
T ss_dssp TBTCEEEEECTT---STTCSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--C
T ss_pred CcccEEEecCCC---CCCCCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 356777653221 112589999999999999999 999 99999999999988 4577777764 3
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
++++.++|.
T Consensus 79 ~~~v~l~v~ 87 (98)
T 2opg_A 79 PQRVRLTLY 87 (98)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 588888874
No 252
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.48 E-value=1.2e-05 Score=73.79 Aligned_cols=174 Identities=15% Similarity=0.232 Sum_probs=111.0
Q ss_pred HHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCC-CeEEEEeCCCcEEEEE-----EEEEc
Q 014786 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFD 196 (418)
Q Consensus 123 ~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~-~~i~V~~~dg~~~~a~-----vv~~d 196 (418)
..+...|+.++...... ...--|+... .||+|++|.++.. ..++|+...|. |... -+..-
T Consensus 20 n~Ia~~ic~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~~nnG~L~I~s~hG~-f~v~nt~~lki~~i 85 (229)
T 1lvm_A 20 NPISSTICHLTNESDGH-----------TTSLYGIGFG--PFIITNKHLFRRNNGTLLVQSLHGV-FKVKNTTTLQQHLI 85 (229)
T ss_dssp HHHHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGGCCSSEEEEEETTEE-EEESCGGGSEEEEC
T ss_pred ChhheEEEEEEeccCCc-----------eEEEEEEeEC--CEEEeChhhhccCCCcEEEEeCCCe-EEeCCCCceeeEEe
Confidence 34556788888753222 1233466675 3999999999865 67888876663 2211 23445
Q ss_pred CCCCeEEEEecCCCCCCcccccC-CCCCCCCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccC
Q 014786 197 QDKDVAVLRIDAPKDKLRPIPIG-VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (418)
Q Consensus 197 ~~~DlAlLkv~~~~~~~~~~~l~-~~~~~~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~ 275 (418)
+..||.++|+..+ +||.+-. .-..++.||+|.++|.-+.... ....|+......... ...+-.......
T Consensus 86 ~g~DiiiIrmPkD---fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~--~~s~vSesS~i~p~~-----~~~fWkHwIsT~ 155 (229)
T 1lvm_A 86 DGRDMIIIRMPKD---FPPFPQKLKFREPQREERICLVTTNFQTKS--MSSMVSDTSCTFPSS-----DGIFWKHWIQTK 155 (229)
T ss_dssp TTSSCEEEECCTT---SCCCCSCCCBCCCCTTCEEEEEEEECSSSS--CEEEECCCEECEEET-----TTTEEEECBCCC
T ss_pred CCccEEEEeCCCc---CCCcccccccCCCCCCCeEEEEEeEeecCC--ccEEECCcceeEecC-----CCCEeEEEeeCC
Confidence 7889999999763 5555422 2356899999999997554332 122343322221111 134566677888
Q ss_pred CCCCCCceeCC-CceEEEEEeeeeCCCCCCCCccceeeccc-chhhhhhhh
Q 014786 276 PGNSGGPLLDS-SGSLIGINTAIYSPSGASSGVGFSIPVDT-VNGIVDQLV 324 (418)
Q Consensus 276 ~G~SGGPl~n~-~G~VVGI~s~~~~~~~~~~~~~~aIp~~~-i~~~l~~l~ 324 (418)
.|+=|.|+++. +|++|||++..... ...+|+.|+.. +.++++...
T Consensus 156 ~G~CGlPlVs~~Dg~IVGiHsl~~~~----~~~NyF~~f~~~f~~~L~~~~ 202 (229)
T 1lvm_A 156 DGQCGSPLVSTRDGFIVGIHSASNFT----NTNNYFTSVPKNFMELLTNQE 202 (229)
T ss_dssp TTCTTCEEEETTTCCEEEEEEEEETT----SCSEEEEECCTTHHHHHHCGG
T ss_pred CCcCCCcEEECCCCcEEEEEcccccC----CCeEEEeCCCHHHHHHHhccc
Confidence 99999999994 99999999987543 33678877733 336665543
No 253
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.47 E-value=1.9e-07 Score=74.15 Aligned_cols=55 Identities=22% Similarity=0.265 Sum_probs=47.6
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++...+.. .++++.++|.
T Consensus 33 ~gv~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 90 (94)
T 2fe5_A 33 NSIYITKIIEGGAAQKDGRLQI-----------GDRLLAVNNTNLQDVRHEEAVASLKN--TSDMVYLKVA 90 (94)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHT--CCSEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 699999999999999999 999 999999999999884 677777764 3568888874
No 254
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.47 E-value=1.6e-07 Score=74.81 Aligned_cols=54 Identities=30% Similarity=0.433 Sum_probs=46.5
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||++ ||++ ||+|++|||++|.+. .++...+. +.|++++|+|.
T Consensus 35 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~~~~v~l~v~ 90 (95)
T 1mfg_A 35 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIV 90 (95)
T ss_dssp CCEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCBHHHHHHHHH--HCCSEEEEEEE
T ss_pred CCEEEEEECCCCchhh-CCCC-----------CCEEEEECCEEcCCCCHHHHHHHhh--cCCCeEEEEEE
Confidence 6999999999999999 9999 999999999999884 45555555 46899999874
No 255
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.47 E-value=1.9e-07 Score=75.39 Aligned_cols=55 Identities=27% Similarity=0.416 Sum_probs=47.9
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ ..++.+++... +++++|+|.
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 92 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQ-----------LDTVLQLNERPVEHWKCVELAHEIRSC--PSEIILLVW 92 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCS-----------SCEEEEETTEECTTCCHHHHHHHHHHC--SSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEE
Confidence 578999999999999999999 99999999999994 68999888763 566888774
No 256
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=1.9e-07 Score=77.70 Aligned_cols=71 Identities=24% Similarity=0.325 Sum_probs=54.8
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g 409 (418)
.+|+.+...... ..+-.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.+++... +
T Consensus 37 glGf~l~~g~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~--~ 102 (117)
T 2fne_A 37 GLGFSIVGGYGS-PHGDLPIYVKTVFAKGAASEDGRLKR-----------GDQIIAVNGQSLEGVTHEEAVAILKRT--K 102 (117)
T ss_dssp BTSEEEEEEEEE-TTEEEEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHC--C
T ss_pred cccEEEecccCC-CCCCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--C
Confidence 467776542110 0112689999999999999999 999 9999999999999 788888888753 4
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++|+|+|.
T Consensus 103 ~~v~l~v~ 110 (117)
T 2fne_A 103 GTVTLMVL 110 (117)
T ss_dssp SSEEEEEE
T ss_pred CeEEEEEE
Confidence 56888774
No 257
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.46 E-value=1.8e-07 Score=76.52 Aligned_cols=56 Identities=27% Similarity=0.277 Sum_probs=49.6
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.++++.. ++++|+|+|.
T Consensus 44 ~g~~V~~v~~~spA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~ 102 (108)
T 2d92_A 44 SVIVIRSLVADGVAERSGGLLP-----------GDRLVSVNEYCLDNTSLAEAVEILKAV-PPGLVHLGIC 102 (108)
T ss_dssp EEEEEEEECTTCHHHHHTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHHS-CSEEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEE
Confidence 689999999999999999 999 99999999999965 78999999875 3568888874
No 258
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.46 E-value=1.8e-07 Score=79.03 Aligned_cols=72 Identities=21% Similarity=0.267 Sum_probs=57.5
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC---CHHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS---NGSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~---~~~dl~~~l~~~~ 407 (418)
..+|+.+...... ..+..|++|.+|.+++||+++| |++ ||+|++|||++|. +..++.+++..
T Consensus 37 ~~lG~~i~g~~~~-~~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~~l~~-- 102 (128)
T 2db5_A 37 GGLGFSVVALRSQ-NLGKVDIFVKDVQPGSVADRDQRLKE-----------NDQILAINHTPLDQNISHQQAIALLQQ-- 102 (128)
T ss_dssp SCCCCEEEEEECS-SSSCEEEEEECCCTTSHHHHTCCCCS-----------SCBEEEESSCBCSTTSCHHHHHHHHHH--
T ss_pred CccCEEEecccCC-CCCCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCCHHHHHHHHHc--
Confidence 3577776532110 1122589999999999999999 999 9999999999998 88999999976
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|+.|+|+|.
T Consensus 103 ~~~~v~l~v~ 112 (128)
T 2db5_A 103 TTGSLRLIVA 112 (128)
T ss_dssp CCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 5889999874
No 259
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.46 E-value=1.8e-07 Score=98.97 Aligned_cols=56 Identities=30% Similarity=0.448 Sum_probs=52.1
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||++|||++ ||+|++|||++| +..++.+++...++|++|+|+|.
T Consensus 496 ~gv~V~~V~~~spA~~AGL~~-----------GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~ 551 (597)
T 4fgm_A 496 QGLDVLNVYHDESAYHAGLSA-----------GDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAF 551 (597)
T ss_dssp TEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEE
T ss_pred CeEEEEEeCCCChHHHCCCCC-----------CCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEE
Confidence 479999999999999999999 999999999999 58899999998889999999874
No 260
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.46 E-value=3.7e-07 Score=72.06 Aligned_cols=66 Identities=27% Similarity=0.430 Sum_probs=51.1
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~ 410 (418)
.+|+.+.... +-.|++|.+|.++|||+++||++ ||+|++|||++|.+ ..++.+.+... ++
T Consensus 15 g~G~~~~~~~-----~~~g~~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--~~ 76 (91)
T 1g9o_A 15 GYGFHLHGEK-----GKLGQYIRLVEPGSPAEKAGLLA-----------GDRLVEVNGENVEKETHQQVVSRIRAA--LN 76 (91)
T ss_dssp BCCEEEEECT-----TCSSEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTC--SS
T ss_pred cccEEEEecC-----CCCCEEEEEECCCCHHHHCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CC
Confidence 4677665422 11689999999999999999999 99999999999998 67888888763 34
Q ss_pred EEEEEE
Q 014786 411 EVSCFT 416 (418)
Q Consensus 411 ~v~l~v 416 (418)
++.+.+
T Consensus 77 ~~~~~~ 82 (91)
T 1g9o_A 77 AVRLLV 82 (91)
T ss_dssp EEEEEE
T ss_pred cEEEEE
Confidence 444433
No 261
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.45 E-value=2.1e-07 Score=75.98 Aligned_cols=55 Identities=25% Similarity=0.395 Sum_probs=49.6
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++..++.. .|+++.|+|.
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 99 (108)
T 1q7x_A 42 GGIYVKAVIPQGAAESDGRIHK-----------GDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLE 99 (108)
T ss_dssp CCCBEEEECTTSTHHHHTCCCS-----------SCEEEEETTEECBSCTTSHHHHHHHH--TTSEEEEEEE
T ss_pred CCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 799999999999999999 999 9999999999999 66788888876 4899999874
No 262
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.45 E-value=3e-07 Score=74.81 Aligned_cols=55 Identities=22% Similarity=0.328 Sum_probs=48.3
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++.. .|+++.++|.
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 95 (106)
T 3axa_A 38 LGIYVKSVVKGGAADVDGRLAA-----------GDQLLSVDGRSLVGLSQERAAELMTR--TSSVVTLEVA 95 (106)
T ss_dssp EEEEEEEEBTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 689999999999999999 999 99999999999985 5667777754 6899999874
No 263
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.45 E-value=1.7e-07 Score=75.90 Aligned_cols=55 Identities=13% Similarity=0.156 Sum_probs=47.1
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++||++ ||+|++|||++|.++ .++...+.. .|+++.++|.
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 85 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRI-----------GDVVLSIDGISAQGMTHLEAQNKIKA--CTGSLNMTLQ 85 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--CSSEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 468999999999999999999 999999999999987 566666654 3888888773
No 264
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.44 E-value=2.3e-07 Score=75.71 Aligned_cols=55 Identities=24% Similarity=0.248 Sum_probs=47.5
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++.. .|++++++|.
T Consensus 32 ~gv~V~~V~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 89 (106)
T 4amh_A 32 NSIYVTKIIEGGAAHKDGKLQI-----------GDKLLAVNNVALEEVTHEEAVTALKN--TSDFVYLKVA 89 (106)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCCHHHHHHHHHS--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEE
Confidence 689999999999999999 999 99999999999965 5677777754 4778888774
No 265
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.44 E-value=2.7e-07 Score=82.87 Aligned_cols=74 Identities=20% Similarity=0.218 Sum_probs=56.8
Q ss_pred ccCeeeccchhhhh-hCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQ-LGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~-~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~ 410 (418)
.+|+.+........ .+..|++|.+|.+++||+++| |++ ||+|++|||+++.++.++.........|+
T Consensus 17 ~lG~~i~~g~~~~~~~~~~g~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~~g~ 85 (196)
T 3gsl_A 17 GLGFSIAGGTDNPHIGDDPSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALKEAGS 85 (196)
T ss_dssp BSSEEEECCTTSCTTSSCCCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHTSCS
T ss_pred CCCEEEEcccCCcccCCCCCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 37777765321111 123799999999999999999 999 99999999999999876665544445689
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
.++++|.
T Consensus 86 ~v~l~v~ 92 (196)
T 3gsl_A 86 IVRLYVM 92 (196)
T ss_dssp EEEEEEE
T ss_pred cEEEEEE
Confidence 9998874
No 266
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.43 E-value=3.2e-07 Score=78.05 Aligned_cols=55 Identities=24% Similarity=0.328 Sum_probs=49.2
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||+. ||+|++|||++|.+ ..++...++. .|+++.|+|+
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 121 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRM-----------GDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVV 121 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCT-----------TCEEEEESSSBCTTSCHHHHHHHHHH--TTTEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEE
Confidence 589999999999999999999 99999999999995 6788888875 5889998875
No 267
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.43 E-value=8.7e-08 Score=80.77 Aligned_cols=55 Identities=27% Similarity=0.410 Sum_probs=50.6
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|. +..++.++|... |++|.|+|.
T Consensus 61 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~v~ 117 (126)
T 2yuy_A 61 DTIFVKQVKEGGPAFEAGLCT-----------GDRIIKVNGESVIGKTYSQVIALIQNS--DTTLELSVM 117 (126)
T ss_dssp CCCCBCCCCSSSHHHHHTCCS-----------SCCCCEETTEECSSCCHHHHHHHHHTC--TTEEEEECC
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcC--CCEEEEEEE
Confidence 689999999999999999999 9999999999998 899999999863 999998863
No 268
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.43 E-value=2.1e-06 Score=74.46 Aligned_cols=127 Identities=17% Similarity=0.241 Sum_probs=75.8
Q ss_pred CCCCeEEEEecCCC---CCCcccccCCCCCCCCCCEEEEEeCCCCCC--------CceeEeEEeeeeeeeccc-CCCCCc
Q 014786 197 QDKDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD--------HTLTTGVISGLRREISSA-ATGRPI 264 (418)
Q Consensus 197 ~~~DlAlLkv~~~~---~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~--------~~~~~G~Vs~~~~~~~~~-~~~~~~ 264 (418)
..+||||||++.+. ..+.++.|.... ...|+.+++.||..... .......+.-+....+.. ......
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~-~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 84 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQE-PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVT 84 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSC-CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCC-CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCC
Confidence 36799999998764 246777776543 46799999999864321 122222332222211111 011112
Q ss_pred ccEEEEc-----cccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeecccchhhhhhhhh
Q 014786 265 QDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLVK 325 (418)
Q Consensus 265 ~~~i~~~-----~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~~ 325 (418)
..++... ...+.|+|||||+. +|+++||++++...++.....+...-+...++++++.++
T Consensus 85 ~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 85 ESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 3445442 35789999999996 589999999873333322334556667777777776543
No 269
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.41 E-value=3.6e-07 Score=75.54 Aligned_cols=70 Identities=23% Similarity=0.396 Sum_probs=54.8
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+..... ....|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++.+++...
T Consensus 28 ~glG~~l~~~~~---~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~-- 91 (116)
T 2dm8_A 28 SGLGLSIVGGKD---TPLNAIVIHEVYEEGAAARDGRLWA-----------GDQILEVNGVDLRNSSHEEAITALRQT-- 91 (116)
T ss_dssp SCCCCCCBCCTT---SSCSSEECCCCCSSSHHHHHTCCCT-----------TCEEEEETTEECSSSCHHHHHHHHHTC--
T ss_pred CcccEEEeCCCC---CCcCCEEEEEECCCChHHhCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 456776653211 112589999999999999999 999 99999999999988 67888888653
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
+++|.|+|.
T Consensus 92 ~~~v~l~v~ 100 (116)
T 2dm8_A 92 PQKVRLVVY 100 (116)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 588888874
No 270
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.41 E-value=6.3e-07 Score=72.67 Aligned_cols=55 Identities=29% Similarity=0.452 Sum_probs=47.7
Q ss_pred cCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++ ||++ ||+|++|||++|.+ ..++..++... +++++|+|+
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~ 92 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQQ--RGEIEFEVV 92 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCS-----------SEEEEEETTEESTTSCHHHHHHHHHHC--CSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEE
Confidence 47899999999999995 9999 99999999999965 77888888763 568888874
No 271
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.40 E-value=2.4e-07 Score=76.90 Aligned_cols=66 Identities=24% Similarity=0.336 Sum_probs=52.4
Q ss_pred cCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCE
Q 014786 334 LGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDE 411 (418)
Q Consensus 334 lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~ 411 (418)
+|+.+..... .+..|++|.+|.+++||+++||++ ||+|++|||++|.+ +.++.+++.. +.
T Consensus 31 ~G~~v~~~~~---~~~~gv~V~~V~~~spA~~aGL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~----~~ 92 (114)
T 2d8i_A 31 YGFSLSSVEE---DGIRRLYVNSVKETGLASKKGLKA-----------GDEILEINNRAADALNSSMLKDFLSQ----PS 92 (114)
T ss_dssp CCCEEEEEEE---TTEEEEEEEECCTTSSHHHHTCCT-----------TCCEEEESSCBGGGCCHHHHHHHHTS----SE
T ss_pred cCEEEEecCc---CCcCCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhC----Cc
Confidence 5777764211 133689999999999999999999 99999999999998 4688888863 37
Q ss_pred EEEEEE
Q 014786 412 VSCFTF 417 (418)
Q Consensus 412 v~l~v~ 417 (418)
+.|+|.
T Consensus 93 v~l~v~ 98 (114)
T 2d8i_A 93 LGLLVR 98 (114)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777763
No 272
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.40 E-value=4.6e-07 Score=70.62 Aligned_cols=52 Identities=25% Similarity=0.345 Sum_probs=45.7
Q ss_pred EEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 353 ~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|.++.+++||+++||++ ||+|++|||+.+... +++.++|+ ..|++|+|+|+
T Consensus 26 ~I~~v~~gspA~~aGl~~-----------GD~Il~VNG~~v~~~~~~evv~llr--~~g~~V~L~v~ 79 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLKDSQIADILS--TSGTVVTITIM 79 (82)
T ss_dssp EEEEECTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEE
T ss_pred EEEEecCCCHHHHcCCCC-----------CCEEEEECCEEcCCCCHHHHHHHHh--cCCCEEEEEEE
Confidence 478999999999999999 999999999999654 67888887 47999999885
No 273
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.39 E-value=2e-07 Score=75.36 Aligned_cols=68 Identities=21% Similarity=0.313 Sum_probs=53.3
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
.+|+.+..... ...|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++...+. +.|
T Consensus 23 g~G~~~~~~~~----~~~~~~V~~V~~~spA~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g 85 (103)
T 1wfv_A 23 GFGFSIRGGRE----YKMDLYVLRLAEDGPAIRNGRMRV-----------GDQIIEINGESTRDMTHARAIELIK--SGG 85 (103)
T ss_dssp SSSBCCEEETT----TTEEEECCCBCTTSHHHHHCSSCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HHC
T ss_pred cCCEEEecccc----CCCCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHH--cCC
Confidence 36776653221 01489999999999999999 999 999999999999984 67777776 368
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
++++|+|.
T Consensus 86 ~~v~l~v~ 93 (103)
T 1wfv_A 86 RRVRLLLK 93 (103)
T ss_dssp SEECEEEE
T ss_pred CeEEEEEE
Confidence 89988874
No 274
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=4e-07 Score=74.02 Aligned_cols=55 Identities=29% Similarity=0.512 Sum_probs=47.4
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+ ..++...+.. .|+++.++|+
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 88 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLA-----------DDHLIEVNGENVEDASHEEVVEKVKK--SGSRVMFLLV 88 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCS-----------SEEEEEETTEECTTCCHHHHHHHHHH--HCSEEEEEEC
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEE
Confidence 689999999999999999999 99999999999985 4677777764 3788888764
No 275
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.36 E-value=3.7e-07 Score=74.96 Aligned_cols=72 Identities=21% Similarity=0.198 Sum_probs=57.0
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC--
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK-- 407 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~-- 407 (418)
-+|+.+...... ..-.+++|.+|.+++||+++| |++ ||+|++|||+++.+ .+++.++|+...
T Consensus 26 glG~~i~gg~~~--~~~~~~~V~~v~~~s~A~~aG~l~~-----------GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r 92 (109)
T 1wi4_A 26 GLGLKILGGINR--NEGPLVYIHEVIPGGDCYKDGRLKP-----------GDQLVSINKESMIGVSFEEAKSIITRAKLR 92 (109)
T ss_dssp CCCEEEEECSSS--SSCSSEEEEEECTTSHHHHHCSCCT-----------TCBEEEETTSCCTTCCHHHHHHHHHHSCCS
T ss_pred ccCEEEEeccCC--CCCCCEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHccccC
Confidence 467776532110 011479999999999999999 999 99999999999998 789999998664
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|++++|++.
T Consensus 93 ~~~~~~l~v~ 102 (109)
T 1wi4_A 93 SESPWEIAFI 102 (109)
T ss_dssp SSSCEEEEEE
T ss_pred CCceEEEEEE
Confidence 5889998875
No 276
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.35 E-value=3.3e-07 Score=74.80 Aligned_cols=55 Identities=25% Similarity=0.408 Sum_probs=47.5
Q ss_pred cCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++ ||++ ||+|++|||++|.+ ..++..++.. .++++.|+|+
T Consensus 41 ~gv~V~~V~~~spA~~aggL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 98 (107)
T 1uhp_A 41 EGIFVSKIVDSGPAAKEGGLQI-----------HDRIIEVNGRDLSRATHDQAVEAFKT--AKEPIVVQVL 98 (107)
T ss_dssp CCCEEEEECSSSHHHHTTCCCS-----------SCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEE
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEE
Confidence 79999999999999999 9999 99999999999976 4566667764 5788888874
No 277
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.35 E-value=1.5e-07 Score=77.37 Aligned_cols=54 Identities=26% Similarity=0.526 Sum_probs=48.9
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++..++.. .|+++.|+|
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v 100 (111)
T 1uju_A 44 EGIFISKVSPTGAAGRDGRLRV-----------GLRLLEVNQQSLLGLTHGEAVQLLRS--VGDTLTVLV 100 (111)
T ss_dssp CCCEEEEECTTSHHHHHSSCCT-----------TCBCCBBSSCBCTTSCHHHHHHHHSS--CSSEEEECC
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEE
Confidence 689999999999999999 999 9999999999999 67888888865 688998876
No 278
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.34 E-value=1.8e-07 Score=77.09 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=47.5
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++.. .|+.+.++|.
T Consensus 35 ~g~~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 92 (113)
T 2g5m_B 35 LGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIG 92 (113)
T ss_dssp EEEEEEECCTTSHHHHHTCSCT-----------TCBEEEETTEECSSCCHHHHHHHHHH--SCSSCEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEE
Confidence 699999999999999999 999 99999999999986 5566666665 4888888774
No 279
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.34 E-value=9.6e-07 Score=79.82 Aligned_cols=54 Identities=24% Similarity=0.377 Sum_probs=49.5
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||+++||++ ||+|++|||++|.+ ..++.+.+.. |+.+.++|.
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~l~~---~~~v~l~v~ 165 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQV-----------GDEIVRINGYSISSCTHEEVINLIRT---EKTVSIKVR 165 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHTS---SSEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHcC---CCeEEEEEE
Confidence 589999999999999999999 99999999999999 8899888865 889998874
No 280
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.34 E-value=3.9e-07 Score=73.48 Aligned_cols=55 Identities=13% Similarity=0.169 Sum_probs=46.8
Q ss_pred cCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCCH-HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSNG-SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~~-~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++ ||++ ||+|++|||++|.+. .++...+.. .++.++|+|.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~-----------GD~I~~ing~~v~~~~~~~~~~~~~--~~~~v~l~v~ 91 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRT-----------GDELVNINGTPLYGSRQEALILIKG--SFRILKLIVR 91 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCT-----------TCEEEEETTEECCSCSHHHHHHHHT--CCSSCEEEEE
T ss_pred CCeEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEEccchHHHHHHHHHh--CCCeEEEEEE
Confidence 47899999999999999 9999 999999999999985 566666664 3778888764
No 281
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.34 E-value=3.2e-07 Score=74.30 Aligned_cols=54 Identities=30% Similarity=0.452 Sum_probs=46.8
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||++ ||++ ||+|++|||++|.+ ..++...+. +.|++++|+|.
T Consensus 43 ~gv~V~~V~~~spA~~-gL~~-----------GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~ 98 (103)
T 1n7t_A 43 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIV 98 (103)
T ss_dssp CSEECCCBSSSSTTSS-SCCT-----------TCEEEEETTEECSSCCHHHHHHHHH--HCCSEEEEEEE
T ss_pred CCEEEEEECCCCchHH-CCCC-----------CCEEEEECCEECCCCCHHHHHHHhh--cCCCeEEEEEE
Confidence 6999999999999999 9999 99999999999988 456666665 36899999874
No 282
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.33 E-value=8.9e-07 Score=79.42 Aligned_cols=55 Identities=27% Similarity=0.254 Sum_probs=50.1
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ +.++.++++. .++.+.|+|.
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 187 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQI-----------GDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVA 187 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECSSCBHHHHHHHHHS--CCEEEEEEEE
T ss_pred CCEEEEEECCCChHHhcCCCCC-----------CCEEEEECCCcCCCCCHHHHHHHHHc--CCCeEEEEEe
Confidence 689999999999999999 999 99999999999999 8999999975 4788888764
No 283
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=98.32 E-value=1.1e-06 Score=73.83 Aligned_cols=69 Identities=23% Similarity=0.404 Sum_probs=54.4
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~ 408 (418)
..+|+.+..... ...|++|.+|.+++||+++| |+. ||+|++|||++|. +..++.+++.. .
T Consensus 31 ~~lG~~i~gg~~----~~~~~~V~~v~~gspA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~--~ 93 (125)
T 3hpk_A 31 NLIGISIGGGAQ----YCPCLYIVQVFDNTPAALDGTVAA-----------GDEITGVNGRSIKGKTKVEVAKMIQE--V 93 (125)
T ss_dssp SCCCEEEEECSS----CCSSEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--S
T ss_pred CCcCEEEeccCC----CCCCEEEEEeCCCCHHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 456776643211 11688999999999999999 999 9999999999998 67889999886 3
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
+++|+++|.
T Consensus 94 ~~~v~l~v~ 102 (125)
T 3hpk_A 94 KGEVTIHYN 102 (125)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 556888763
No 284
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.31 E-value=3.7e-07 Score=83.77 Aligned_cols=72 Identities=19% Similarity=0.374 Sum_probs=60.3
Q ss_pred ccccCeeeccc--hhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCC
Q 014786 331 RPILGIKFAPD--QSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~--~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~ 408 (418)
+.++|+.+.+. ..++. .|++|.+|.++|||+++||++ .||+|++|||+ |.+.+|+.+++... +
T Consensus 94 ~~~lGi~~~~~~~~~~~~---~Gv~V~~V~~~spA~~aGl~~----------~GD~I~~ing~-v~~~~~l~~~l~~~-~ 158 (209)
T 3rle_A 94 QGLLGVSIRFCSFDGANE---NVWHVLEVESNSPAALAGLRP----------HSDYIIGADTV-MNESEDLFSLIETH-E 158 (209)
T ss_dssp SSSSCEEEEEEECTTGGG---SCEEEEEECTTSHHHHHTCCT----------TTEEEEEESSC-CCSSSCHHHHHHHT-T
T ss_pred cCccceEEeecChhHccc---cceEEEEeCCCChHHHCCCCC----------CCCEEEECCCE-eCCHHHHHHHHHhC-C
Confidence 57899988742 11222 799999999999999999986 16999999998 99999999999987 8
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+++.++|+
T Consensus 159 g~~v~l~v~ 167 (209)
T 3rle_A 159 AKPLKLYVY 167 (209)
T ss_dssp TSCEEEEEE
T ss_pred CCeEEEEEE
Confidence 999998875
No 285
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=98.31 E-value=8.8e-07 Score=72.11 Aligned_cols=57 Identities=19% Similarity=0.293 Sum_probs=47.6
Q ss_pred cCcEEEecCCCChhhhcC--ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC--CCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG--LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV--GDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG--l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~--g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.++ .++...+..... +..+.|+|.
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~-----------GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~ 105 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVR 105 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEE
T ss_pred CCeEEEEECCCCchHHcCCccCC-----------CCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEE
Confidence 478999999999999999 999 999999999999965 567777765432 458888874
No 286
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.31 E-value=1e-06 Score=79.78 Aligned_cols=55 Identities=29% Similarity=0.501 Sum_probs=51.6
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +.+++.+++.. .|+.+.|+|.
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l~~-----------GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 192 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTIKP-----------GDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEATLLIE 192 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--TCSEEEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 689999999999999999 999 9999999999999 99999999986 7899999874
No 287
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=98.31 E-value=1.1e-06 Score=78.16 Aligned_cols=73 Identities=19% Similarity=0.249 Sum_probs=56.2
Q ss_pred cccCeeeccchhhhhh--CccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcC
Q 014786 332 PILGIKFAPDQSVEQL--GVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQC 406 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~--~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~ 406 (418)
.-||+.+......... +..|++|.+|.+++||+++| |++ ||+|++|||++| .+..++..+|+.
T Consensus 91 ~glG~~i~g~~~g~~~~~~~~gi~V~~V~~gspA~~aG~L~~-----------GD~Il~VNG~~v~~~~~~~~~~~l~~- 158 (170)
T 3egg_C 91 EGLGISIIGMGAGADMGLEKLGIFVKTVTEGGAAHRDGRIQV-----------NDLLVEVDGTSLVGVTQSFAASVLRN- 158 (170)
T ss_dssp TBSSEEEEEECSSSSCCSSSBEEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECTTBCHHHHHHHHHH-
T ss_pred CeEeEEEEecccCCccccCCCCEEEEEECCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc-
Confidence 3477776541111111 22689999999999999999 999 999999999999 556788888876
Q ss_pred CCCCEEEEEEE
Q 014786 407 KVGDEVSCFTF 417 (418)
Q Consensus 407 ~~g~~v~l~v~ 417 (418)
.|++|+|+|.
T Consensus 159 -~g~~v~L~V~ 168 (170)
T 3egg_C 159 -TKGRVRFMIG 168 (170)
T ss_dssp -CCSEEEEEEE
T ss_pred -CCCEEEEEEE
Confidence 5889999874
No 288
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.31 E-value=4.8e-07 Score=75.32 Aligned_cols=71 Identities=24% Similarity=0.302 Sum_probs=55.3
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC--
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK-- 407 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~-- 407 (418)
-+|+.+...... ....++|.+|.+++||+++ ||++ ||.|++|||+++.+ .+++.+.|....
T Consensus 29 glG~~i~gg~~~---~~~~i~I~~V~~gspA~~aggL~~-----------GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~ 94 (118)
T 1v6b_A 29 SLDLALEGGVDS---PVGKVVVSAVYEGGAAERHGGVVK-----------GDEIMAINGKIVTDYTLAEAEAALQKAWNQ 94 (118)
T ss_dssp CCCCEEEEBTTS---SSCSEEEEECCTTSHHHHHCSSCT-----------TCEEEEESSCBCTTCBHHHHHHHHHHHHHH
T ss_pred ccCEEEEcccCC---CCCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhhhc
Confidence 567766432110 1134899999999999999 9999 99999999999998 678888887542
Q ss_pred CCCEEEEEEE
Q 014786 408 VGDEVSCFTF 417 (418)
Q Consensus 408 ~g~~v~l~v~ 417 (418)
.|++|+|+|+
T Consensus 95 ~g~~v~l~v~ 104 (118)
T 1v6b_A 95 GGDWIDLVVA 104 (118)
T ss_dssp TCSEEEEEEE
T ss_pred CCCeEEEEEE
Confidence 3899999885
No 289
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=98.30 E-value=1.1e-06 Score=88.17 Aligned_cols=68 Identities=28% Similarity=0.410 Sum_probs=59.1
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~ 410 (418)
.||+.+.... ..|++|.+|.++|||+++||++ ||+|++|||++|.+ .+++...+...++|+
T Consensus 20 ~lG~~i~gg~------~~gi~V~~V~~gspA~~aGL~~-----------GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~ 82 (391)
T 3tsz_A 20 SVGLRLAGGN------DVGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGE 82 (391)
T ss_dssp SCCEEEEEET------TTEEEEEEECTTCHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTS
T ss_pred ceeEEEEecC------CCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhhcCCC
Confidence 4787775422 1689999999999999999999 99999999999987 899999998777899
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
+++|+|.
T Consensus 83 ~v~l~v~ 89 (391)
T 3tsz_A 83 EVTILAQ 89 (391)
T ss_dssp EEEEEEE
T ss_pred eEEEEEe
Confidence 9999874
No 290
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.30 E-value=1.1e-06 Score=79.59 Aligned_cols=71 Identities=24% Similarity=0.306 Sum_probs=58.5
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..+|+.+......+ ...|++|.+|.+++||+++| |++ ||+|++|||++|.+ .+++.+++...
T Consensus 119 ~~lG~~~~~~~~~~--~~~gv~V~~V~~~s~A~~aG~l~~-----------GD~I~~vng~~v~~~~~~~~~~~l~~~-- 183 (196)
T 1p1d_A 119 VELGITISSPSSRK--PGDPLVISDIKKGSVAHRTGTLEL-----------GDKLLAIDNIRLDSCSMEDAVQILQQC-- 183 (196)
T ss_dssp CCCCCEEECSCSSS--TTCCCEEEECCSSSHHHHTSCCCT-----------TCEEEEETTEEGGGCCHHHHHHHHHHC--
T ss_pred CCcCEEEECCCCCC--CCCCEEEEEECCCCcHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC--
Confidence 34677776532111 12689999999999999999 999 99999999999999 99999999875
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|+.+.|+|.
T Consensus 184 ~~~v~l~v~ 192 (196)
T 1p1d_A 184 EDLVKLKIR 192 (196)
T ss_dssp TTCEEEEEE
T ss_pred CCEEEEEEE
Confidence 889998874
No 291
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.29 E-value=4.2e-07 Score=75.35 Aligned_cols=55 Identities=27% Similarity=0.477 Sum_probs=47.8
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++..++.. .|+++.|+|.
T Consensus 50 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 107 (117)
T 2ehr_A 50 KGIFIKQVLEDSPAGKTNALKT-----------GDKILEVSGVDLQNASHSEAVEAIKN--AGNPVVFIVQ 107 (117)
T ss_dssp CSEEEEEECSSSTTTSSCSCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHT--SCSSEEEEEC
T ss_pred CCEEEEEeCCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 699999999999999999 999 99999999999977 5567777764 5888888774
No 292
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.29 E-value=3.6e-07 Score=76.68 Aligned_cols=70 Identities=20% Similarity=0.346 Sum_probs=53.2
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~ 408 (418)
..||+.+..... ....|++|.+|.+++||+++| |++ ||+|++|||++|.+ ..++...+.. .
T Consensus 36 ~glG~~l~~~~~---~~~~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~Ing~~v~~~~~~~~~~~~~~--~ 99 (124)
T 2daz_A 36 NGLGLSLAGNKD---RSRMSIFVVGINPEGPAAADGRMRI-----------GDELLEINNQILYGRSHQNASAIIKT--A 99 (124)
T ss_dssp SCCCEEEECBSS---TTSCCEEEEEECTTSHHHHHTCCCT-----------TCEECEESSCBCTTSCHHHHHHHHHH--S
T ss_pred CccCEEEeccCC---CCcCCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--C
Confidence 457777654211 112589999999999999999 999 99999999999976 5566566654 3
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
++++.|+|.
T Consensus 100 ~~~v~l~v~ 108 (124)
T 2daz_A 100 PSKVKLVFI 108 (124)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEE
Confidence 678888874
No 293
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.29 E-value=5.6e-07 Score=75.23 Aligned_cols=55 Identities=16% Similarity=0.293 Sum_probs=47.6
Q ss_pred cCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++ ||++ ||+|++|||++|.+ ..++..++.. .+++|+|+|.
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 110 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRV-----------GDRIVTICGTSTEGMTHTQAVNLLKN--ASGSIEMQVV 110 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCT-----------TCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 58999999999999999 9999 99999999999987 4667777765 3778888875
No 294
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.28 E-value=4.5e-07 Score=72.62 Aligned_cols=54 Identities=22% Similarity=0.281 Sum_probs=46.3
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+ +||++ ||+|++|||++|.+ ..++...+.. +|++++++|+
T Consensus 31 ~~~~V~~V~~~spA~-agL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~ 86 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFP-----------GDQILQMNNEPAEDLSWERAVDILRE--AEDSLSITVV 86 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCT-----------TCBEEEESSCBSTTCCHHHHHHHHHH--CSSCEEEEEE
T ss_pred CCeEEEEECCCCchh-hCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 578999999999996 99999 99999999999987 5566666655 6899999875
No 295
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.27 E-value=5e-07 Score=75.16 Aligned_cols=71 Identities=17% Similarity=0.248 Sum_probs=53.5
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhc--CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA--GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCK 407 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~a--Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~ 407 (418)
..+|+.+...... ..|++|.+|.+++||+++ ||++ ||+|++|||++|.+ ..++..++....
T Consensus 27 ~~~G~~l~gg~~~----~~~v~V~~V~~~spA~~a~gGL~~-----------GD~Il~ing~~v~~~~~~~~~~~~~~~~ 91 (119)
T 2cs5_A 27 GRFGFNVKGGYDQ----KMPVIVSRVAPGTPADLCVPRLNE-----------GDQVVLINGRDIAEHTHDQVVLFIKASC 91 (119)
T ss_dssp SCCSEEEEEEGGG----TEEEEEEEECSSSTTTSSSSCCCT-----------TCEEEEETTBCTTSSCHHHHHHHHHHHH
T ss_pred CCcCEEEecccCC----CCCeEEEEECCCCHHHHhhcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcc
Confidence 4577776542211 157999999999999999 9999 99999999999987 467777776542
Q ss_pred C--CCEEEEEEE
Q 014786 408 V--GDEVSCFTF 417 (418)
Q Consensus 408 ~--g~~v~l~v~ 417 (418)
. ++++.|+|.
T Consensus 92 ~~~~~~v~l~v~ 103 (119)
T 2cs5_A 92 ERHSGELMLLVR 103 (119)
T ss_dssp HCCSSCEEEEEE
T ss_pred ccCCCEEEEEEE
Confidence 1 357888764
No 296
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.26 E-value=7.1e-07 Score=73.57 Aligned_cols=67 Identities=22% Similarity=0.324 Sum_probs=51.1
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHH--HHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~d--l~~~l~~~~~g~ 410 (418)
-+|+.+..... ...|++|.+|.+++||+++||++ ||+|++|||++|.++.+ +...+.. ++
T Consensus 28 ~lG~~l~~~~~----~~~gv~V~~V~~~s~A~~aGL~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~---~~ 89 (114)
T 1x5n_A 28 GLGCSISSGPI----QKPGIFISHVKPGSLSAEVGLEI-----------GDQIVEVNGVDFSNLDHKEAVNVLKS---SR 89 (114)
T ss_dssp CCCEEEEECCS----SSCSEEEEEECTTSTTTTTTCCT-----------TCEEEEETTEETTSCCTTHHHHHHHH---CS
T ss_pred ceeEEEeecCC----CCCCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHhc---CC
Confidence 46777654211 11689999999999999999999 99999999999999854 6666654 34
Q ss_pred EEEEEEE
Q 014786 411 EVSCFTF 417 (418)
Q Consensus 411 ~v~l~v~ 417 (418)
++.++|+
T Consensus 90 ~v~l~v~ 96 (114)
T 1x5n_A 90 SLTISIV 96 (114)
T ss_dssp SEEEEEC
T ss_pred eEEEEEE
Confidence 6777663
No 297
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.26 E-value=5.1e-07 Score=74.91 Aligned_cols=54 Identities=24% Similarity=0.326 Sum_probs=46.7
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+ +||++ ||+|++|||++|.+. .++..++.. .|+++.|+|.
T Consensus 46 ~gv~V~~V~~~spA~-~gL~~-----------GD~I~~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~ 101 (117)
T 2csj_A 46 TSIVISDVLPGGPAD-GLLQE-----------NDRVVMVNGTPMEDVLHSFAVQQLRK--SGKIAAIVVK 101 (117)
T ss_dssp CBCEEEEECTTSSHH-HHBCT-----------TCEEEEESSCBCBTCCHHHHHHHHHH--SCSEEEEEEE
T ss_pred CCEEEEEECCCCccc-ccCCC-----------CCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEE
Confidence 689999999999997 99999 999999999999885 556666665 5889999874
No 298
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.25 E-value=8.5e-07 Score=73.74 Aligned_cols=55 Identities=27% Similarity=0.383 Sum_probs=46.1
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|. +..++..++... .+..+.+++
T Consensus 42 ~gv~V~~V~~~spA~~aG~L~~-----------GD~Il~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v 99 (119)
T 1x6d_A 42 KVITVHRVFPNGLASQEGTIQK-----------GNEVLSINGKSLKGTTHHDALAILRQA-REPRQAVIV 99 (119)
T ss_dssp SSCEEEEECSSSHHHHHTSSCT-----------TCBCCEETTEECSSCCHHHHHHHHHHT-TSSSEEEEE
T ss_pred CCEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEE
Confidence 689999999999999999 999 9999999999999 577888888754 344444544
No 299
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.22 E-value=3.9e-06 Score=69.34 Aligned_cols=54 Identities=28% Similarity=0.322 Sum_probs=46.9
Q ss_pred CcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 351 G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
|..|.++.+ |++.+||++ ||+|++|||++|.+. +|+.++|...+.|++|.|+|.
T Consensus 35 g~~V~~I~~--~~~~aGL~~-----------GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~ 90 (113)
T 3soe_A 35 GQKVKMILD--SQWCQGLQK-----------GDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLIL 90 (113)
T ss_dssp EEEEEEESC--GGGSTTCCT-----------TCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEE
T ss_pred CcEEEEecC--hHHhCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEE
Confidence 456777776 688899999 999999999999965 699999998888999999884
No 300
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.22 E-value=2.6e-06 Score=77.15 Aligned_cols=69 Identities=23% Similarity=0.284 Sum_probs=54.8
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~ 408 (418)
..||+.+...... ..|++|.+|.+++||+++ ||+. ||+|++|||++|.++ .++..++.. .
T Consensus 19 ~~lG~~i~~~~~~----~~~~~V~~v~~~spA~~aggl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~ 81 (200)
T 2qt5_A 19 TTLGLTVSGGIDK----DGKPRVSNLRQGGIAARSDQLDV-----------GDYIKAVNGINLAKFRHDEIISLLKN--V 81 (200)
T ss_dssp CCCCEEEECCTTS----SSCSEEEEECTTSHHHHTTSCCT-----------TCEEEEETTEECTTSCHHHHHHHHHT--C
T ss_pred CCCCEEEecccCC----CCCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--C
Confidence 4566666432110 157899999999999999 9999 999999999999999 888877754 4
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++++++|.
T Consensus 82 g~~v~l~v~ 90 (200)
T 2qt5_A 82 GERVVLEVE 90 (200)
T ss_dssp CSEEEEEEE
T ss_pred CCeEEEEEe
Confidence 888888874
No 301
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=7.1e-07 Score=73.29 Aligned_cols=55 Identities=33% Similarity=0.454 Sum_probs=47.8
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+. .++..++.. .++++.++|.
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 96 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRR-----------GDRILSVNGVNLRNATHEQAAAALKR--AGQSVTIVAQ 96 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCT-----------TCEEEEESSCBCTTCCHHHHHHHHHS--CCSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEE
Confidence 689999999999999999 999 999999999999987 566666653 6889998874
No 302
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.19 E-value=2.3e-06 Score=77.72 Aligned_cols=65 Identities=25% Similarity=0.338 Sum_probs=52.9
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVG 409 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g 409 (418)
.+|+.+.... .|++|.+|.+++||+++| |++ ||+|++|||++|.++ .++..++.. .+
T Consensus 126 ~lG~~~~~~~-------~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~VNg~~v~~~~~~~~~~~l~~--~~ 185 (206)
T 3r0h_A 126 ELGLSLSPNE-------IGCTIADLIQGQYPEIDSKLQR-----------GDIITKFNGDALEGLPFQVCYALFKG--AN 185 (206)
T ss_dssp CCCEEEEECS-------SCEEEEEECTTSCHHHHHHCCT-----------TCEEEEETTEECTTCCHHHHHHHHHT--CC
T ss_pred ccCeEEEcCC-------ceEEEEEECCCChHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CC
Confidence 3566665322 689999999999999999 999 999999999999965 777888865 46
Q ss_pred CEEEEEEE
Q 014786 410 DEVSCFTF 417 (418)
Q Consensus 410 ~~v~l~v~ 417 (418)
+.+.|+|.
T Consensus 186 ~~v~L~V~ 193 (206)
T 3r0h_A 186 GKVSMEVT 193 (206)
T ss_dssp SEEEEEEE
T ss_pred CeEEEEEE
Confidence 78888764
No 303
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.19 E-value=2.7e-06 Score=69.05 Aligned_cols=57 Identities=23% Similarity=0.317 Sum_probs=48.7
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcC---CCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQC---KVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~---~~g~~v~l~v~ 417 (418)
.+.+|.+|.+++||+++| |++ ||.|++|||+++.+ ++++.++|... ..++.+++.|.
T Consensus 32 ~~~~I~~v~~~s~A~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~ 94 (103)
T 1ufx_A 32 PLPRIVTIQRGGSAHNCGQLKV-----------GHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVT 94 (103)
T ss_dssp SSCEEEEECTTSHHHHHCSSCT-----------TCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEEC
T ss_pred CcEEEEEeCCCChHHHCCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEE
Confidence 456899999999999999 999 99999999999976 88888888753 45888888763
No 304
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=98.16 E-value=2.7e-06 Score=87.04 Aligned_cols=57 Identities=30% Similarity=0.413 Sum_probs=53.7
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||+++||++ ||+|++|||++|.+ .+++..+|...++|++|+|+|.
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~ 81 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEE-----------GDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQ 81 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCT-----------TEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEE
Confidence 689999999999999999999 99999999999988 8999999998889999999874
No 305
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.45 E-value=2.6e-07 Score=76.41 Aligned_cols=55 Identities=29% Similarity=0.459 Sum_probs=46.8
Q ss_pred cCcEEEecCCCChhhh-cCccccccccCCCccCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~-aGl~~~~~~~~~~l~~GDiIl~ing~~v--~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.++|||++ +||++ ||+|++|||++| .+..++.+++.. .+++++|+|+
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~-----------GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v~l~V~ 110 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHV-----------GDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVV 110 (112)
Confidence 5789999999999999 99999 999999999999 447788887764 4666888764
No 306
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.12 E-value=2.5e-06 Score=76.85 Aligned_cols=54 Identities=30% Similarity=0.431 Sum_probs=45.0
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~--dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||++ ||++ ||+|++|||++|.+.. ++...+.. .++.|.|+|+
T Consensus 24 ~g~~V~~v~~~spA~~-gl~~-----------GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~ 79 (195)
T 2qbw_A 24 DGIFVTRVQPEGPASK-LLQP-----------GDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIV 79 (195)
T ss_dssp CSEEEEEECTTSTTTT-TCCT-----------TCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEE
T ss_pred CCEEEEEECCCChHHh-CCCC-----------CCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEE
Confidence 7999999999999999 9999 9999999999999865 44455543 4668888764
No 307
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.11 E-value=2.6e-06 Score=72.11 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=49.3
Q ss_pred cCcEEEecCCCChhhhc-CccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKA-GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~a-Gl~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.+|.+++||+++ ||++ ||+|++|||+++.+ .+++.+++... .+..|.++|.
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~ 115 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQP-----------GDEILQLGGTAMQGLTRFEAWNIIKAL-PDGPVTIVIR 115 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCT-----------TCCEEECSSCBGGGSCHHHHHHHHHTS-CSSEEEEEEE
T ss_pred CCEEEEEECCCCHHHHcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEE
Confidence 57999999999999999 9999 99999999999998 58888888764 4778888763
No 308
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.10 E-value=6.7e-06 Score=82.41 Aligned_cols=71 Identities=30% Similarity=0.443 Sum_probs=57.9
Q ss_pred ccccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 014786 331 RPILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (418)
Q Consensus 331 ~~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~ 408 (418)
+..+|+.+.... ..-.|++|.+|.+++||+++||++ ||+|++|||++|.++ .++.+.+. .++
T Consensus 84 ~~giG~~~~~~~----~~~~~~~V~~v~~~spA~~aGl~~-----------GD~I~~Ing~~v~~~~~~~~~~~l~-~~~ 147 (388)
T 1fc6_A 84 VTGVGLEITYDG----GSGKDVVVLTPAPGGPAEKAGARA-----------GDVIVTVDGTAVKGMSLYDVSDLLQ-GEA 147 (388)
T ss_dssp CBBCSEEEEECT----TCSSCEEEEEECTTSHHHHTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHC-BST
T ss_pred eEEEEEEEEEee----cCCCcEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHh-cCC
Confidence 456788776431 011689999999999999999999 999999999999996 78888886 467
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|++|+|+|.
T Consensus 148 g~~v~l~v~ 156 (388)
T 1fc6_A 148 DSQVEVVLH 156 (388)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999998874
No 309
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=98.06 E-value=5e-06 Score=75.42 Aligned_cols=72 Identities=15% Similarity=0.262 Sum_probs=52.3
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC----HHHHHHHHhcC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN----GSDLYRILDQC 406 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~----~~dl~~~l~~~ 406 (418)
.-||+.+...... ..+ .|++|.+|.+++||+++| |+. ||+|++|||++|.+ ..++..++...
T Consensus 29 ~~lG~~i~~g~~~-~~~-~g~~V~~V~~~spA~~aG~L~~-----------GD~Il~vng~~v~~~~~~~~~~~~~~~~~ 95 (206)
T 3r0h_A 29 KPMGVIVCGGKNN-HVT-TGCVITHVYPEGQVAADKRLKI-----------FDHICDINGTPIHVGSMTTLKVHQLFHTT 95 (206)
T ss_dssp SCCCEEEECCSSS-SCC-SCEEEEEECTTSHHHHHCCCCT-----------TCEEEEETTEECCGGGSCHHHHHHHHHSC
T ss_pred CCcCEEEecccCC-CCC-CCeEEEEECCCChHHhcCCCCC-----------CCEEEEECCEEcCCCccCHHHHHHHHHhc
Confidence 4566666432110 111 689999999999999998 999 99999999999999 66666666542
Q ss_pred CCCCEEEEEEE
Q 014786 407 KVGDEVSCFTF 417 (418)
Q Consensus 407 ~~g~~v~l~v~ 417 (418)
.+.+++++|+
T Consensus 96 -~~~~v~l~v~ 105 (206)
T 3r0h_A 96 -YEKAVTLTVF 105 (206)
T ss_dssp -CSSEEEEEEE
T ss_pred -CCCceEEEEE
Confidence 3333887764
No 310
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=98.05 E-value=1.4e-05 Score=63.75 Aligned_cols=69 Identities=20% Similarity=0.290 Sum_probs=55.9
Q ss_pred cccCeeeccchhhhhhCccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCC
Q 014786 332 PILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKV 408 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~ 408 (418)
..||+.+... +....+|.++.++++|++.| |++ ||.|++|||+.+..+ .++.++|++.+.
T Consensus 16 ~~LG~tI~~~------g~g~~~I~rI~~gg~a~r~g~L~v-----------GD~I~~VNG~~v~g~~h~evv~lLk~~~~ 78 (95)
T 3gge_A 16 DSLGLTITDN------GVGYAFIKRIKDGGVIDSVKTICV-----------GDHIESINGENIVGWRHYDVAKKLKELKK 78 (95)
T ss_dssp SCCCEEEECS------SSSCCEEEEECTTSHHHHCTTCCT-----------TCEEEEETTEECTTCCHHHHHHHHHHSCT
T ss_pred CCceEEEEcC------CCCcEEEEEEcCCChHHhcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhCCC
Confidence 4667776532 11457899999999999876 455 999999999999775 699999999999
Q ss_pred CCEEEEEEE
Q 014786 409 GDEVSCFTF 417 (418)
Q Consensus 409 g~~v~l~v~ 417 (418)
|.+++|++.
T Consensus 79 g~~~~L~lv 87 (95)
T 3gge_A 79 EELFTMKLI 87 (95)
T ss_dssp TCEEEEEEE
T ss_pred CCEEEEEEE
Confidence 999999864
No 311
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=98.04 E-value=2e-06 Score=79.28 Aligned_cols=66 Identities=26% Similarity=0.409 Sum_probs=54.4
Q ss_pred ccCeeeccchhhhhhCccCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCC
Q 014786 333 ILGIKFAPDQSVEQLGVSGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGD 410 (418)
Q Consensus 333 ~lGv~~~~~~~~~~~~~~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~ 410 (418)
.+|+.+.... +..|++|..|.+++||+++||+. ||+|++|||++|. ++.++.+++... |+
T Consensus 21 glG~~l~~~~-----~~~gv~V~~V~~gSpA~~aGL~~-----------GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~ 82 (216)
T 2krg_A 21 GYGFNLHSDK-----SKPGQFIRSVDPDSPAEASGLRA-----------QDRIVEVNGVCMEGKQHGDVVSAIRAG--GD 82 (216)
T ss_dssp SSCEEECCCS-----SSCSCBEEEECTTSHHHHHTCCT-----------TCBCCEETTEECTTCCTHHHHHHHHHH--CS
T ss_pred CceEEEEecC-----CCCCeEEEEeCCCChHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHhc--CC
Confidence 4666664322 12589999999999999999999 9999999999999 999999999865 88
Q ss_pred EE-EEEE
Q 014786 411 EV-SCFT 416 (418)
Q Consensus 411 ~v-~l~v 416 (418)
+| .++|
T Consensus 83 ~v~~l~V 89 (216)
T 2krg_A 83 ETKLLVV 89 (216)
T ss_dssp EEEEEEC
T ss_pred eEEEEEE
Confidence 88 6654
No 312
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.00 E-value=5.2e-06 Score=84.87 Aligned_cols=55 Identities=33% Similarity=0.404 Sum_probs=50.2
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+++|+.++++. .++.+.|+|.
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~-----------GD~I~~Vng~~v~~~~~~~~~l~~--~~~~v~l~v~ 440 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRP-----------GDIIISANKKPVTDVKSLQTIAQE--KKKELLVQVL 440 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCT-----------TCEEEEETTEECCSHHHHHHHTTS--SCSCEEEEEE
T ss_pred CceEEEEECCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHhc--CCCeEEEEEE
Confidence 589999999999999999999 999999999999999999999986 5777877663
No 313
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.95 E-value=1.1e-05 Score=82.01 Aligned_cols=55 Identities=22% Similarity=0.363 Sum_probs=49.0
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+++|+.++++.. ++.+.|+|.
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~-----------GD~I~~vng~~v~~~~~~~~~l~~~--~~~v~l~v~ 417 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQK-----------DDVIIGVNRDRVNSIAEMRKVLAAK--PAIIALQIV 417 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHhC--CCeEEEEEE
Confidence 589999999999999999999 9999999999999999999999873 337777653
No 314
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.92 E-value=8e-06 Score=77.47 Aligned_cols=55 Identities=27% Similarity=0.329 Sum_probs=48.1
Q ss_pred cCcEEEecCCCChhhh-cCccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGK-AGLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~-aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||++ +||++ ||+|++|||++|.+. .++..++... |++|+|+|.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~-----------GD~Il~VNG~~v~~~t~~e~v~~l~~~--g~~V~L~V~ 160 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFV-----------GDAILSVNGEDLSSATHDEAVQALKKT--GKEVVLEVK 160 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCS-----------SCEEEEESSCBCTTSCHHHHHHHHHHC--CSCCCEEEE
T ss_pred CCEEEEEECCCCHHHHhCCCCC-----------CCEEEEECCEECCCcCHHHHHHHHhcC--CCeEEEEEE
Confidence 5899999999999999 79999 999999999999985 6777777763 778888774
No 315
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.81 E-value=1.1e-05 Score=80.89 Aligned_cols=71 Identities=27% Similarity=0.386 Sum_probs=57.0
Q ss_pred cccCeeeccchhhhhhC--ccCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcC
Q 014786 332 PILGIKFAPDQSVEQLG--VSGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQC 406 (418)
Q Consensus 332 ~~lGv~~~~~~~~~~~~--~~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~ 406 (418)
..||+.+.... .| ..|++|.+|.+++||+++| |++ ||+|++|||+++.++ .++.+++...
T Consensus 216 e~lG~~i~~~~----~g~~~~g~~V~~V~~gspA~~aG~L~~-----------GD~Il~VnG~~v~~~~~~~~~~~l~~~ 280 (388)
T 3suz_A 216 EILGVVVVESG----WGSILPTVILANMMNGGPAARSGKLSI-----------GDQIMSINGTSLVGLPLATCQGIIKGL 280 (388)
T ss_dssp CCCCCCCBCC-------CCSCCCBCCCCCCSSHHHHTCCCCT-----------TCEEEEETTEECSSCCSTTHHHHTTTC
T ss_pred CceeEEEEecC----CCCcCCCEEEEeeCCCCHHHHcCCCCC-----------CCEEEEECCEEccCCCHHHHHHHHHhc
Confidence 35666665421 12 2578999999999999999 999 999999999999988 7888999887
Q ss_pred CCCCEEEEEEE
Q 014786 407 KVGDEVSCFTF 417 (418)
Q Consensus 407 ~~g~~v~l~v~ 417 (418)
+.+++++++|.
T Consensus 281 ~~~~~v~l~v~ 291 (388)
T 3suz_A 281 KNQTQVKLNIV 291 (388)
T ss_dssp TTCSCEEEEEE
T ss_pred cCCCccccccc
Confidence 77888888763
No 316
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.71 E-value=1.4e-05 Score=80.35 Aligned_cols=53 Identities=23% Similarity=0.344 Sum_probs=46.3
Q ss_pred CcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 351 GVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 351 G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.++|..|.++|||++|||+. ||+|++|||++|.+++ +.+++.. +|++|+|+|+
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~-----------GD~I~~InG~~v~~~~-~~~~l~~--~g~~v~l~v~ 143 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQR-----------GHWIMMMNGDYITKKV-ESELLQG--STRQLQIGVY 143 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCT-----------TCEEEEETTBCBCTTT-GGGGTSC--SCEEEEEEEE
T ss_pred eEEEEEeCCCChHHHcCCCC-----------CCEEEEECCEEccchh-HHHHhhC--CCCEEEEEEE
Confidence 37899999999999999999 9999999999999985 6666654 7999998874
No 317
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.69 E-value=0.0079 Score=53.61 Aligned_cols=159 Identities=15% Similarity=0.195 Sum_probs=96.2
Q ss_pred HcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEE--EEc---CC
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV--GFD---QD 198 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv--~~d---~~ 198 (418)
-+++.++.|++. .+.-||+-|..+ ..|-..|.-. .+.+.| ||+.++..-. -.| ..
T Consensus 14 l~~~N~~~vtt~---------------~g~ft~LgI~dr-~~vvP~Ha~~-~~~i~i---~g~~~~v~d~~~L~~~~g~~ 73 (187)
T 3qzr_A 14 LLRRNVRQVQTD---------------QGHFTMLGVRDR-LAVLPRHSQP-GKTIWI---EHKLVNVLDAVELVDEQGVN 73 (187)
T ss_dssp HHHHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEECCCTTCCC
T ss_pred HHHcCeEEEEEC---------------CCeEEEEEEeee-EEEEeCCCCC-CCEEEE---CCEEEEeeeeEEEECCCCCE
Confidence 345568888873 334588888654 8999999943 344433 6776654211 112 24
Q ss_pred CCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCC
Q 014786 199 KDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (418)
Q Consensus 199 ~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G 277 (418)
.||++++++... +++-+.---.++...-..+..+-+...... ....|.+...... . ..+......+.++++..+|
T Consensus 74 ~Elt~v~l~~~~-kfRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-n--lsg~~t~r~l~Y~~pTk~G 149 (187)
T 3qzr_A 74 LALTLITLDTNE-KFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-N--LSGKPTHRTMMYNFPTKAG 149 (187)
T ss_dssp CSEEEEEECSSC-CBCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-E--ETTEEEEEEEEESSCCCTT
T ss_pred EEEEEEEcCCCc-cccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-e--CCCCccccEEEECCCCCCC
Confidence 699999998643 344443111122222224455544433323 3344655543322 1 1233456789999999999
Q ss_pred CCCCceeCCCceEEEEEeeeeCCCCCCCCccceeec
Q 014786 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 278 ~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
+=||+|+. .|+++||+.++ +...||+.++
T Consensus 150 ~CGgvl~~-~gkIiGIHvaG------nG~~G~~a~L 178 (187)
T 3qzr_A 150 QCGGVVTS-VGKIIGIHIGG------NGRQGFCAGL 178 (187)
T ss_dssp CTTCEEEE-TTEEEEEEEEE------CSSCEEEEEC
T ss_pred ccCCeEEe-cCcEEEEEECC------CCCcEEEEEe
Confidence 99999995 89999999986 3356777654
No 318
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.65 E-value=0.00076 Score=61.77 Aligned_cols=173 Identities=14% Similarity=0.127 Sum_probs=97.1
Q ss_pred HHHHHHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCC---eE--EEEeCCCcEEEEE--
Q 014786 119 VRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DI--RVTFADQSAYDAK-- 191 (418)
Q Consensus 119 ~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---~i--~V~~~dg~~~~a~-- 191 (418)
.++...+.+-.|+|.....++.. ...++|..|..+ +.|...|...... .+ .+.. +|+.|...
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~~~~---------~~~~t~LgI~~r-~~lvP~H~~~~~~~~~~~~~~i~i-~g~~~~~~~~ 71 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKNGSV---------RWVMNALGVKDD-WLLVPSHAYKFEKDYEMMEFYFNR-GGTYYSISAG 71 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETTSCC---------EEEEEEEEEEBT-EEEEEGGGTTTSTTGGGEEEEEEE-TTEEEEEEGG
T ss_pred eeehhhhhccEEEEEEeCCCCCc---------ceEEEEEEEcCC-EEEEecccCcccccccccceEEEE-CCEEEeeccc
Confidence 34556677778888875433221 246899999765 9999999975322 22 2333 66666543
Q ss_pred ---EEEEc-CCCCeEEEEecCCCCCCcccc--cCCCCC-CCCCC-EEEEEeCCCCCCCceeEe------EEeeeeeeecc
Q 014786 192 ---IVGFD-QDKDVAVLRIDAPKDKLRPIP--IGVSAD-LLVGQ-KVYAIGNPFGLDHTLTTG------VISGLRREISS 257 (418)
Q Consensus 192 ---vv~~d-~~~DlAlLkv~~~~~~~~~~~--l~~~~~-~~~G~-~V~~vG~p~g~~~~~~~G------~Vs~~~~~~~~ 257 (418)
+...| ...||++++++.. .+++.+. +.+..+ ...++ .+.+++...+.+.....+ .++. .. .
T Consensus 72 ~v~~~~~d~~~~Dl~lv~Lp~~-~~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~-~~-i-- 146 (212)
T 2hal_A 72 NVVIQSLDVGFQDVVLMKVPTI-PKFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATY-VH-K-- 146 (212)
T ss_dssp GSEEECSSSSCCSEEEEECTTS-CCBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEE-EE-E--
T ss_pred cceeEeccCCCceEEEEECCCC-CccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeE-EE-e--
Confidence 33333 4679999999763 2333332 111111 22333 233332111111111111 0110 00 0
Q ss_pred cCCCCCcc----cEEEEccccCCCCCCCceeCC----CceEEEEEeeeeCCCCCCCCccceeec
Q 014786 258 AATGRPIQ----DVIQTDAAINPGNSGGPLLDS----SGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 258 ~~~~~~~~----~~i~~~~~i~~G~SGGPl~n~----~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
...+.... ..+.++++..+|+=|||++.. .|+++||+.++. .+.|||.++
T Consensus 147 ~~~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~------g~~G~a~~l 204 (212)
T 2hal_A 147 KNDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG------NSILVAKLV 204 (212)
T ss_dssp CTTSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE------TTEEEEEEC
T ss_pred cCCCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC------CCcEEEEee
Confidence 11222233 678899999999999999974 799999999873 346788764
No 319
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.64 E-value=0.011 Score=52.86 Aligned_cols=145 Identities=16% Similarity=0.227 Sum_probs=83.6
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEE--EEEEcC---CCCeEEEEecCCCCCCcccc--cCCCCCC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP--IGVSADL 224 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~~--l~~~~~~ 224 (418)
+.-||..|-.+ ++|.+.|...+ +++.| +|+.++.. ....|. ..||++++++... .++-+. +.+.. .
T Consensus 23 G~ft~LgI~dr-~~lvP~Ha~~~-~ti~i---~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~-kFRDIr~~~~~~~-~ 95 (190)
T 3zve_A 23 GEFTMLGVHDR-VAVIPTHASVG-ETIYI---NDVETKVLDACALRDLTDTNLEITIVKLDRNQ-KFRDIRHFLPRYE-D 95 (190)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEECCSS-CBCCCGGGSCSSC-C
T ss_pred EEEEEEEEeCC-EEEEecCCCCC-cEEEE---CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCc-ccCchHHhccccC-C
Confidence 45578888755 99999997643 33332 45443321 112233 3499999998643 344332 22211 2
Q ss_pred CCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCC
Q 014786 225 LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (418)
Q Consensus 225 ~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~ 304 (418)
...+.+.++-.+....-....|.+....... ..+......+.++++..+|+=||||+ .+|+++||+.++ +
T Consensus 96 ~~~~~~l~i~s~~~~~~~~~v~~v~~~~~i~---l~g~~~~~~~~Y~~pT~~G~CG~~li-~~gkI~GiHvaG------~ 165 (190)
T 3zve_A 96 DYNDAVLSVHTSKFPNMYIPVGQVTNYGFLN---LGGTPTHRILMYNFPTRAGQCGGVVT-TTGKVIGIHVGG------N 165 (190)
T ss_dssp CEEEEEEEECSSSCSSEEEEEEEEEEEEEEE---ETTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEE------C
T ss_pred CCCCeEEEEECCCCcceEEecccceEeceee---cCCCeeeeeEEEecCCCCCccCCeEE-ECCCEEEEEECc------C
Confidence 2234444443332222233444544333221 12344567889999999999999999 578999999987 2
Q ss_pred CCccceeec
Q 014786 305 SGVGFSIPV 313 (418)
Q Consensus 305 ~~~~~aIp~ 313 (418)
...||+.++
T Consensus 166 G~~g~~~~l 174 (190)
T 3zve_A 166 GAQGFAAML 174 (190)
T ss_dssp SSCEEEEEC
T ss_pred CCceEehhh
Confidence 346777543
No 320
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.61 E-value=0.0098 Score=53.14 Aligned_cols=147 Identities=15% Similarity=0.207 Sum_probs=86.0
Q ss_pred CeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEE--EEEEcCC---CCeEEEEecCCCCCCcccccCCCCCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQD---KDVAVLRIDAPKDKLRPIPIGVSADLL 225 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~~---~DlAlLkv~~~~~~~~~~~l~~~~~~~ 225 (418)
.+.-||.-|-.+ +.|-..|... .+++.| +|+.++.. ....+.+ .||++++++... .++-+.---.+...
T Consensus 29 ~G~ft~LgI~d~-~~viP~Ha~p-~~~i~i---~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~-kFRDIr~fi~~~~~ 102 (190)
T 4dcd_A 29 KGEFTMLGVHDN-VAILPTHASP-GESIVI---DGKEVEILDAKALEDQAGTNLEITIITLKRNE-KFRDIRPHIPTQIT 102 (190)
T ss_dssp TEEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEEEECTTCCEEEEEEEEESSSC-CBCCCGGGSCSSCC
T ss_pred CeEEEEEEEECc-EEEEeCCCCC-CcEEEE---CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCc-cccchhHhccccCC
Confidence 345678888754 9999999533 344443 56655432 1223433 499999998753 34444310111222
Q ss_pred CCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCC
Q 014786 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (418)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~ 304 (418)
....+..+=+-...+. ....|.+........ .+.....++.++++..+|+=||||+ .+|+++||+.++ +
T Consensus 103 ~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~l---sg~~t~r~l~Y~~pT~~G~CGg~l~-~~gkIlGIHvaG------~ 172 (190)
T 4dcd_A 103 ETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNL---GGRQTARTLMYNFPTRAGQCGGVIT-CTGKVIGMHVGG------N 172 (190)
T ss_dssp CEEEEEEEECSSSSTTEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEE------C
T ss_pred CCCceEEEEecCCCccEEEEeeeeEEeccccC---CCCcccceEEEccCCCCCccCCEEE-eCCCEEEEEECC------C
Confidence 3344444333223333 233444443332211 3445568899999999999999999 578999999987 2
Q ss_pred CCccceeec
Q 014786 305 SGVGFSIPV 313 (418)
Q Consensus 305 ~~~~~aIp~ 313 (418)
+..||+.+.
T Consensus 173 G~~G~aa~L 181 (190)
T 4dcd_A 173 GSHGFAAAL 181 (190)
T ss_dssp SSCEEEEEC
T ss_pred CCceEeeeh
Confidence 346676543
No 321
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.59 E-value=0.0071 Score=53.90 Aligned_cols=159 Identities=15% Similarity=0.200 Sum_probs=94.7
Q ss_pred HcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEE--EEEEcCC---
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQD--- 198 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~~--- 198 (418)
-+++.++.|++. .+.-||.-|-.+ ..|-..|.-. .+.+.| ||+.++.. ..-.|.+
T Consensus 12 l~k~N~~~vtT~---------------~G~ft~LgI~dr-~~vvPtHa~~-~~~i~i---~G~~~~v~d~~~L~~~~g~~ 71 (191)
T 3q3y_A 12 MMKRNASTVKTE---------------YGEFTMLGIYDR-WAVLPRHAKP-GPTILM---NDQEVGVLDAKELVDKDGTN 71 (191)
T ss_dssp HHHHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCC-CSEEEE---TTEEEEEEEEEEEECTTCCE
T ss_pred HHHcCeEEEEEC---------------CCcEEEEEEece-EEEEECCCCC-CCEEEE---CCEEEEeeeEEEEEcCCCCE
Confidence 345668888872 334578888644 8899999933 344433 67776642 1122333
Q ss_pred CCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCC
Q 014786 199 KDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (418)
Q Consensus 199 ~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G 277 (418)
.||++|+++... +++-+.---.+..........+-+....+. .+..|.+...... .. .+.....++.++++...|
T Consensus 72 lElt~v~l~~~~-kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-nl--sg~~t~r~l~Y~~pTk~G 147 (191)
T 3q3y_A 72 LELTLLKLNRNE-KFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL-NL--GGTPTKRMLVYNFPTRAG 147 (191)
T ss_dssp EEEEEEEEECSS-CBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-EE--TTEEEEEEEEEESCCCTT
T ss_pred EEEEEEECCCCc-cccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceE-eC--CCCcccCEEEecCCCCCC
Confidence 499999998653 344443111122333333344444333332 3444655543221 11 233446789999999999
Q ss_pred CCCCceeCCCceEEEEEeeeeCCCCCCCCccceeec
Q 014786 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 278 ~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
+=||+|+. .|+++||++++ +...||+.++
T Consensus 148 ~CGgvL~~-~gkIiGIHvgG------nG~~Gfaa~L 176 (191)
T 3q3y_A 148 QCGGVLMS-TGKVLGIHVGG------NGHQGFSAAL 176 (191)
T ss_dssp CTTCEEEE-TTEEEEEEEEE------ETTEEEEEEC
T ss_pred ccCCEEEe-CCCEEEEEECC------CCcceEEeeh
Confidence 99999995 78999999986 3456777544
No 322
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.49 E-value=9.3e-05 Score=64.86 Aligned_cols=54 Identities=20% Similarity=0.188 Sum_probs=43.7
Q ss_pred EEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 353 LVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 353 ~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
+|.++.+++||+++||+. ||+|++|||++|.++..-.-.+.-.+.|+.+.+++.
T Consensus 110 ~v~~v~~~s~a~~aGl~~-----------GD~I~~ing~~v~~~~~~~v~~~v~r~g~~~~l~v~ 163 (166)
T 1w9e_A 110 KITSIVKDSSAARNGLLT-----------EHNICEINGQNVIGLKDSQIADILSTSGTVVTITIM 163 (166)
T ss_dssp EEEEECTTSHHHHTTCCS-----------SEEEEEETTEECTTCCHHHHHHHHHHSCSEEEEEEE
T ss_pred EEEEEccCCHHHHcCCCC-----------CCEEEEECCEECCCCChHHHHHHHhhCCCEEEEEEE
Confidence 899999999999999999 999999999999987543333333346888887763
No 323
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.46 E-value=0.00012 Score=79.05 Aligned_cols=55 Identities=25% Similarity=0.357 Sum_probs=47.1
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~~--~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |+. ||+|++|||++|.++ .++..++.. .|++|+|+|.
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~-----------GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~ 146 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRV-----------NDSILFVNEVDVREVTHSAAVEALKE--AGSIVRLYVM 146 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCC-----------CCEEEEECCEECCCCCHHHHHHHhhc--cccccceEEE
Confidence 789999999999999999 999 999999999999988 455555643 5888888774
No 324
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.41 E-value=2.2e-05 Score=80.19 Aligned_cols=54 Identities=30% Similarity=0.437 Sum_probs=0.0
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.|++|.+|.+++||+++||++ ||+|++|||++|.+.+|+.+++... ++ .+.|+|
T Consensus 383 ~gv~V~~V~~gspA~~aGL~~-----------GDiI~~vng~~v~~~~~l~~~l~~~-~~-~v~l~v 436 (448)
T 1ky9_A 383 QGVVVNNVKTGTPAAQIGLKK-----------GDVIIGANQQAVKNIAELRKVLDSK-PS-VLALNI 436 (448)
T ss_dssp -------------------------------------------------------------------
T ss_pred CeEEEEEecCCCHHHHcCCCC-----------CCEEEEECCEECCCHHHHHHHHHcC-CC-eEEEEE
Confidence 589999999999999999999 9999999999999999999999764 33 666654
No 325
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=97.39 E-value=0.01 Score=52.75 Aligned_cols=142 Identities=21% Similarity=0.315 Sum_probs=84.7
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEE--EEEEEcC---CCCeEEEEecCCCCCCcccc--cCCCCCCC
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDA--KIVGFDQ---DKDVAVLRIDAPKDKLRPIP--IGVSADLL 225 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a--~vv~~d~---~~DlAlLkv~~~~~~~~~~~--l~~~~~~~ 225 (418)
.-||.-|..+ +.|...|...+. .+ .+ +|+.++. ...-.|. ..||++++++... +++-+. +.+.....
T Consensus 24 ~~t~LgI~d~-~~vvP~Ha~~~~-~i--~i-~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~-kfRDIrkfi~~~~~~~ 97 (182)
T 2b0f_A 24 EFTGLGIHDR-VCVIPTHAQPGD-DV--LV-NGQKIRVKDKYKLVDPENINLELTVLTLDRNE-KFRDIRGFISEDLEGV 97 (182)
T ss_dssp EEEEEEEEBT-EEEEESTTCCCS-EE--EE-TTEEEEEEEEEEEEETTTEEEEEEEEEECCSS-CBCCGGGTBCSSCCCS
T ss_pred cEEEEEEeee-EEEEecCCCCcc-EE--EE-CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcc-cccchHHhcCCCCCCC
Confidence 3478888755 999999997653 33 22 5654321 2222232 4699999997643 343332 22221112
Q ss_pred CCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCC
Q 014786 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (418)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~ 304 (418)
+.+.++- -.+.+. .+..|.+...... . ..+.....++.++++..+|+=||||+. +|+++||+.++ .
T Consensus 98 --~~~lv~n-~~~~p~~~~~vg~~~~~g~i-~--l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG------~ 164 (182)
T 2b0f_A 98 --DATLVVH-SNNFTNTILEVGPVTMAGLI-N--LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGG------N 164 (182)
T ss_dssp --EEEEEEE-SSSCEEEEEEEEEEEEEEEE-E--ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEE------E
T ss_pred --ceEEEEE-cCCCceEEEEecceEEeceE-c--CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCC------C
Confidence 4444443 223222 2345555433322 1 123445678899999999999999994 88999999986 3
Q ss_pred CCccceeec
Q 014786 305 SGVGFSIPV 313 (418)
Q Consensus 305 ~~~~~aIp~ 313 (418)
...||+.++
T Consensus 165 G~~Gfaa~l 173 (182)
T 2b0f_A 165 GRQGFSAQL 173 (182)
T ss_dssp TTEEEEEEC
T ss_pred CCceEehhh
Confidence 457777654
No 326
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=97.38 E-value=0.00022 Score=76.98 Aligned_cols=55 Identities=31% Similarity=0.432 Sum_probs=49.2
Q ss_pred cCcEEEecCCCChhhhcC-ccccccccCCCccCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAG-LLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aG-l~~~~~~~~~~l~~GDiIl~ing~~v~~--~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.|++|.+|.+++||+++| |++ ||+|++|||++|.+ .+++.++|.. .|++|.|+|.
T Consensus 331 ~gv~V~~V~~gs~A~~aG~L~~-----------GD~Il~VNg~~v~~~~~~e~~~~l~~--~~~~v~L~v~ 388 (721)
T 2xkx_A 331 EGIFISFILAGGPADLSGELRK-----------GDQILSVNGVDLRNASHEQAAIALKN--AGQTVTIIAQ 388 (721)
T ss_pred CCeEEEEeCCCChHHhcCCCcc-----------CCEEEEECCEECCCCCHHHHHHHHHh--cCCeEEEEEE
Confidence 689999999999999999 999 99999999999988 7899999975 3778888763
No 327
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.36 E-value=0.02 Score=50.86 Aligned_cols=143 Identities=19% Similarity=0.217 Sum_probs=84.8
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEE--EEEEcC---CCCeEEEEecCCCCCCcccc--cCCCCCCC
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP--IGVSADLL 225 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~~--l~~~~~~~ 225 (418)
.-++.-|..+ ..|-..|...+. .+.+ +|+.++.. ...+|+ ..||++++++... +++-+. +.+ ...
T Consensus 24 ~~t~Lgi~~~-~~lvP~Ha~~~~-~i~i---~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~-kfrDi~kfip~--~~~ 95 (180)
T 1cqq_A 24 KFTGLGVYDR-FVVVPTHADPGK-EIQV---DGITTKVIDSYDLYNKNGIKLEITVLKLDRNE-KFRDIRRYIPN--NED 95 (180)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEEEEEEECTTSCEEEEEEEEECSSC-CBCCGGGGSCS--SCC
T ss_pred cEEEEEEeeE-EEEEccCcCccc-EEEE---CCEEEEeccceEEEcCCCCeEEEEEEEcCCcc-ccCccHhhcCC--CcC
Confidence 3577777655 899999998874 3322 55554433 333453 3499999997643 344433 211 121
Q ss_pred CCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCC
Q 014786 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (418)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~ 304 (418)
.....+.+-+-..... .+..|.+...... .. .+......+.++++..+|+=||+|+ .+|+++||+.++ .
T Consensus 96 ~~~~~~l~~n~~~~~~~~v~~g~~~~~g~i-~~--~g~~~~r~l~Y~~pT~~G~CGsvl~-~~gkIiGIHvAG------~ 165 (180)
T 1cqq_A 96 DYPNCNLALLANQPEPTIINVGDVVSYGNI-LL--SGNQTARMLKYSYPTKSGYCGGVLY-KIGQVLGIHVGG------N 165 (180)
T ss_dssp CEEEEEEEECTTSSSCEEEEEEEEEECCCE-EE--TTEEECSEEEECCCCCTTCTTCEEE-ETTEEEEEEEEE------C
T ss_pred CCCceEEEEEcCCCceEEEEccceeeeeeE-ec--CCcEeccEEEecCCCCCCcCCCeEE-ECCCEEEEEECC------C
Confidence 1122333333322233 2444544332221 11 2344567899999999999999999 467999999987 2
Q ss_pred CCccceeec
Q 014786 305 SGVGFSIPV 313 (418)
Q Consensus 305 ~~~~~aIp~ 313 (418)
+..||+.++
T Consensus 166 G~~G~aa~l 174 (180)
T 1cqq_A 166 GRDGFSAML 174 (180)
T ss_dssp SSCEEEEEC
T ss_pred CCcEEEeee
Confidence 357777654
No 328
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.35 E-value=0.00029 Score=73.20 Aligned_cols=54 Identities=17% Similarity=0.153 Sum_probs=49.3
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCF 415 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~ 415 (418)
+||+|.+|.+++++..+|++. ||+|++|||++|+|..||.+++++.+ ++.+.+.
T Consensus 415 ~gVvvs~V~~~s~a~~~g~~~-----------gdiI~~vNg~~V~s~~~l~~~l~~~k-~~~l~~~ 468 (539)
T 4fln_A 415 QIVILSQVLANEVNIGYEDMN-----------NQQVLKFNGIPIRNIHHLAHLIDMCK-DKYLVFE 468 (539)
T ss_dssp CCEEEEEECCCGGGTTCSSCC-----------SEEEEEETTEECCSHHHHHHHHHTCC-SSEEEEE
T ss_pred eEEEEEEecCCchhhhcCCCC-----------CCEEEeECCEEcCCHHHHHHHHHHcC-CCeEEEE
Confidence 689999999999999999999 99999999999999999999999875 6666664
No 329
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.12 E-value=0.00053 Score=76.57 Aligned_cols=57 Identities=26% Similarity=0.416 Sum_probs=48.9
Q ss_pred cCcEEEecCCC--------ChhhhcCccccccccCCCccCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEE
Q 014786 350 SGVLVLDAPPN--------GPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVSCFTF 417 (418)
Q Consensus 350 ~G~~V~~v~~~--------~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~ 417 (418)
.+++|.++.++ +||+++|++ |+ ||+|++|||++|.+..++.+.+.. ++|++|+|+|.
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~---------l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l~v~ 812 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGID---------PT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARIRLS 812 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCC---------CT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEEEEE
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCC---------cC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEEEEE
Confidence 57889999987 999999943 24 999999999999999999888875 67999998874
No 330
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.80 E-value=0.00019 Score=71.77 Aligned_cols=54 Identities=20% Similarity=0.279 Sum_probs=0.0
Q ss_pred cCcEEEecCCCChhhhcCccccccccCCCccCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEE
Q 014786 350 SGVLVLDAPPNGPAGKAGLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVSCFT 416 (418)
Q Consensus 350 ~G~~V~~v~~~~pa~~aGl~~~~~~~~~~l~~GDiIl~ing~~v~--~~~dl~~~l~~~~~g~~v~l~v 416 (418)
.+.+|.+|.+++||+++||++ ||+|++|||++|. +.+++.+++.. .++.+.++|
T Consensus 315 ~~g~I~~V~~gs~A~~aGL~~-----------GD~Il~VNg~~v~~~s~~~~~~~l~~--~~~~v~L~V 370 (388)
T 3suz_A 315 QNGIICSLMRGGIAERGGVRV-----------GHRIIEINGQSVVATAHEKIVQALSN--SVGEIHMKT 370 (388)
T ss_dssp ---------------------------------------------------------------------
T ss_pred ecCEEEEeecCCHHHHcCCCC-----------CCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEE
Confidence 344889999999999999999 9999999999997 45788888865 467777766
No 331
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=96.71 E-value=0.0057 Score=55.74 Aligned_cols=159 Identities=16% Similarity=0.243 Sum_probs=88.8
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEE---EEEE----EEcCC---CCeEEEEecCCCCCCcccccCCCC
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYD---AKIV----GFDQD---KDVAVLRIDAPKDKLRPIPIGVSA 222 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~---a~vv----~~d~~---~DlAlLkv~~~~~~~~~~~l~~~~ 222 (418)
+-+|..|-.+ +.|...|...+... .+.+ +++.+. ..+. ..|.+ .||++++++... .++-+.--..+
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~~~-~i~i-~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~-kfrdi~k~f~~ 106 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEKYD-KIML-DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGN-KVRDITKHFRD 106 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSCCS-EEEE-TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSC-CBCCCGGGBCS
T ss_pred EEEEeeEcCC-EEEEEcccCCCCCc-EEEE-cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCc-ccCchhhhccc
Confidence 4466667544 89999999876322 3333 344432 2222 23433 699999997642 33333211122
Q ss_pred CC--CCCCEEEEEeCCCCCCCceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeC---CCceEEEEEeee
Q 014786 223 DL--LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD---SSGSLIGINTAI 297 (418)
Q Consensus 223 ~~--~~G~~V~~vG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n---~~G~VVGI~s~~ 297 (418)
++ ..++.+..+-++.........|.+........ ...+.....++.++++..+|+=||+|+- .+|+++||+.++
T Consensus 107 ~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~-~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG 185 (209)
T 2bhg_A 107 TARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVV-SMDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAG 185 (209)
T ss_dssp SCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCCeEEEEeccCccCceeeeeeEEEccceee-ecCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEcc
Confidence 22 34555766666553323333454433322121 1123345678999999999999999964 378999999987
Q ss_pred eCCCCCCCCccceeecccchhhhhhhh
Q 014786 298 YSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 298 ~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
..+.||+-+ ..++.++.++
T Consensus 186 ------~g~~G~aa~--l~r~~~~~~~ 204 (209)
T 2bhg_A 186 ------GNGVGYCSC--VSRSMLQKMK 204 (209)
T ss_dssp ------ETTEEEEEE--CCHHHHHHHH
T ss_pred ------CCCceEEEE--cCHHHHHHHH
Confidence 234566644 3344444443
No 332
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=96.63 E-value=0.0045 Score=46.99 Aligned_cols=24 Identities=21% Similarity=0.163 Sum_probs=20.7
Q ss_pred eEEEEEEEcCCcEEEecccccCCCC
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGAS 176 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~ 176 (418)
..|.|.+|+++ +|||+|||+.+..
T Consensus 24 ~~CgGslIs~~-~VLTAAHC~~~~~ 47 (80)
T 2pka_A 24 FQCGGVLVNPK-WVLTAAHCKNDNY 47 (80)
T ss_dssp EEEEEEEEETT-EEEECGGGCCSCC
T ss_pred eEEEEEEEcCC-EEEECHHHCCCCc
Confidence 47999999987 9999999997643
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=96.13 E-value=0.24 Score=52.59 Aligned_cols=143 Identities=16% Similarity=0.227 Sum_probs=80.0
Q ss_pred EEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEE--EEEEcC---CCCeEEEEecCCCCCCcccc--cCCCCCCC
Q 014786 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP--IGVSADLL 225 (418)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~~~--l~~~~~~~ 225 (418)
.-+|..|..+ .+|+..|...+. .+.+ +|..+... ...+|. ..||+++++.... .++.+. +.+. ..
T Consensus 24 ~~~~l~i~~~-~~l~p~H~~~~~-~~~i---~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~-~frdi~~~~~~~--~~ 95 (644)
T 2ijd_1 24 EFTMLGVHDN-VAILPTHASPGE-SIVI---DGKEVAILAAKALADQAGTNLEITIITLKRNE-KFRDIRPHIPTQ--IT 95 (644)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-EEEE---TTEEEEEEECCEEECTTSCEEEEEEEEECSSC-CBCCCGGGSCSS--CC
T ss_pred EEEEEEEece-EEEEccccCCCc-eEEE---CCEEEEeccceeEEcCCCCceeEEEEECCCCC-CcCChHHhccCC--cc
Confidence 3466777655 899999988653 3332 34333211 223444 3599999997532 343332 2111 11
Q ss_pred CCCEEEEEeCCCCCCC-ceeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCC
Q 014786 226 VGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (418)
Q Consensus 226 ~G~~V~~vG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~ 304 (418)
......++-...+... .+..|.+..... .. ..+......+.++.+..+|+=|+|++. +|+||||++++.
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~~~~g~-~~--~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG~------ 165 (644)
T 2ijd_1 96 ETNDGVLIVNTSKYPNMYVPVGAVTEQGY-LN--LGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGGN------ 165 (644)
T ss_dssp CEEEEEEEECSSSSTTEEEEEEEEEEEEE-EC--CTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEEC------
T ss_pred CCCceEEEEcCCCCceEEEEeeeeeeccc-ee--cCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcCC------
Confidence 2222322222222222 233455543222 11 223445678899999999999999985 799999999872
Q ss_pred CCccceeec
Q 014786 305 SGVGFSIPV 313 (418)
Q Consensus 305 ~~~~~aIp~ 313 (418)
...||+.++
T Consensus 166 g~~g~a~~l 174 (644)
T 2ijd_1 166 GSHGFAAAL 174 (644)
T ss_dssp SSCEEEEEC
T ss_pred CCceEEEEc
Confidence 235666554
No 334
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=94.21 E-value=0.035 Score=43.72 Aligned_cols=51 Identities=31% Similarity=0.411 Sum_probs=32.2
Q ss_pred ccCCCCCCCceeCC-Cc--eEEEEEeeeeCCCCCCCCccceeecccchhhhhhhh
Q 014786 273 AINPGNSGGPLLDS-SG--SLIGINTAIYSPSGASSGVGFSIPVDTVNGIVDQLV 324 (418)
Q Consensus 273 ~i~~G~SGGPl~n~-~G--~VVGI~s~~~~~~~~~~~~~~aIp~~~i~~~l~~l~ 324 (418)
..+.|+|||||+-. +| .++||++++.... .....+...-+....+++++.+
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~-~~~~p~vyt~V~~y~~WI~~~~ 94 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTC-STSTPGVYARVTALVNWVQQTL 94 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECCTTC-CTTSEEEEEEHHHHHHHHHHHH
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCC-CCCCCeEEEEHHHhHHHHHHHH
Confidence 46889999999853 22 7999999875322 1222344455555566665543
No 335
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=93.81 E-value=0.14 Score=56.43 Aligned_cols=80 Identities=16% Similarity=0.207 Sum_probs=50.5
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCCC-cEEEEEEEEE-cCCCCeEEEEecCCCCCCcccccCCCC-------
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-SAYDAKIVGF-DQDKDVAVLRIDAPKDKLRPIPIGVSA------- 222 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-~~~~a~vv~~-d~~~DlAlLkv~~~~~~~~~~~l~~~~------- 222 (418)
..|.+.+|+++ ||+|.+|...- . .|.+.++ ..|+. +..- .+..|+++.|++.......|+.+....
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~gy-~--~v~fG~~~n~Y~i-V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~g~~~~~y~ 130 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGGY-T--NVSFGDGENRYNI-VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQGAVAGAYL 130 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCSC-C--EECCTTSCCCEEE-EECCBCSSSSCBCCEESSCCCSSCCCCBCSSCSCTTGGG
T ss_pred CCceEEEEcCc-EEEEeeecCCC-c--eEEeCCCcceEEE-EeeCCCCCCCeeeeecccccccccceeeccccCcccccc
Confidence 45888899987 99999996432 2 4555554 35654 2222 234599999998765455555553321
Q ss_pred CCCCCCEEEEEeCC
Q 014786 223 DLLVGQKVYAIGNP 236 (418)
Q Consensus 223 ~~~~G~~V~~vG~p 236 (418)
+.+.....+-+|..
T Consensus 131 d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 131 DKERYPVFYRLGSG 144 (1048)
T ss_dssp CTTTCCCEEEEECS
T ss_pred ccccCceEEEECCc
Confidence 14556667777754
No 336
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=92.56 E-value=0.23 Score=43.62 Aligned_cols=132 Identities=20% Similarity=0.243 Sum_probs=74.6
Q ss_pred HcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEE
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (418)
.+.+-|-+|....--+. ...|-|+.- +|-.=|-.||-+++.- . .+++.+ ...+-|-..|+
T Consensus 21 ~l~dGVYRI~~~gl~G~----------~Q~GVGv~k--~GVFHTMWHVTrGa~l---~-~~g~~l--~P~WasV~~Dl-- 80 (198)
T 3e90_B 21 DTTTGVYRIMTRGLLGS----------YQAGAGVMV--EGVFHTLWHTTKGAAL---M-SGEGRL--DPYWGSVKEDR-- 80 (198)
T ss_dssp CCCSEEEEEEEEETTEE----------EEEEEEEEE--TTEEEECHHHHTTCCE---E-ETTEEE--CEEEEETTTTE--
T ss_pred cCCCceEEEEecccccc----------ceeeeEEee--CCEEEeeeeecCcceE---E-ECCcEe--cceeehheece--
Confidence 55778889977432211 235666665 5889999999988542 1 233332 22344556665
Q ss_pred EEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCC
Q 014786 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (418)
Q Consensus 204 Lkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 280 (418)
+..-.+ -+|. ..-.-.++|.++-++-+.... ...|++.-. . .++-.+.....+|.||
T Consensus 81 isYGG~------WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~--------~----g~iGaV~lD~p~GTSG 140 (198)
T 3e90_B 81 LCYGGP------WKLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTP--------E----GEIGAVTLDFPTGTSG 140 (198)
T ss_dssp EEESSS------CCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET--------T----EEEEEECCCCCTTCTT
T ss_pred eecCCc------ccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC--------C----CeEEEEECCCCCCCCC
Confidence 334332 1121 122223677777777664432 223332210 0 1233344455689999
Q ss_pred CceeCCCceEEEEEe
Q 014786 281 GPLLDSSGSLIGINT 295 (418)
Q Consensus 281 GPl~n~~G~VVGI~s 295 (418)
+|++|.+|+|||+.-
T Consensus 141 SPIin~~G~VVGLYG 155 (198)
T 3e90_B 141 SPIVDKNGDVIGLYG 155 (198)
T ss_dssp CEEECTTCCEEEECC
T ss_pred CceecCCCcEEEEec
Confidence 999999999999954
No 337
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=92.51 E-value=0.2 Score=43.72 Aligned_cols=133 Identities=21% Similarity=0.302 Sum_probs=72.5
Q ss_pred HHcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeE
Q 014786 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVA 202 (418)
Q Consensus 123 ~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlA 202 (418)
.++.+-|-+|....--+. ...|-|+.- +|-.=|-.||-+++.- ..+++.+ ....-|-..|++
T Consensus 16 ~~l~dGvYRI~~~gl~G~----------~Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~l--~P~wa~V~~Dli 77 (185)
T 2fom_B 16 AELEDGAYRIKQKGILGY----------SQIGAGVYK--EGTFHTMWHVTRGAVL----MHKGKRI--EPSWADVKKDLI 77 (185)
T ss_dssp --CCSEEEEEEEEETTEE----------EEEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEE--CEEEEETTTTEE
T ss_pred ccCCCcEEEEEecccccc----------ceeeeEEee--CCEEEeeeeecCcceE----EECCcEe--cceeehheecee
Confidence 357888999876432211 235677665 5889999999988542 1234332 222445556653
Q ss_pred EEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCC
Q 014786 203 VLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (418)
Q Consensus 203 lLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~S 279 (418)
..-.+ . +|. ..-.-+++|.++-++-+.... ...|+.. ...+ +.-.+...+.+|.|
T Consensus 78 --sYGG~---W---kL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~--------~~~G----eigaI~lD~p~GTS 135 (185)
T 2fom_B 78 --SYGGG---W---KLE--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFK--------TNTG----TIGAVSLDFSPGTS 135 (185)
T ss_dssp --EESSS---C---CCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEE--------CSSC----EEEEECCCSCGGGT
T ss_pred --ecCCc---c---cCc--cccCCCceEEEEEECCCCceEEEEcCCceee--------cCCC----eEEEEECCCCCCCC
Confidence 34332 1 121 112234666666665554321 1222221 0111 23334445668999
Q ss_pred CCceeCCCceEEEEEe
Q 014786 280 GGPLLDSSGSLIGINT 295 (418)
Q Consensus 280 GGPl~n~~G~VVGI~s 295 (418)
|+|++|.+|+|||+.-
T Consensus 136 GSPIin~~G~vvGLYG 151 (185)
T 2fom_B 136 GSPIVDKKGKVVGLYG 151 (185)
T ss_dssp TCEEECTTSCEEEETT
T ss_pred CCceEccCCcEEEEec
Confidence 9999999999999954
No 338
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=92.50 E-value=0.29 Score=42.84 Aligned_cols=132 Identities=22% Similarity=0.289 Sum_probs=74.0
Q ss_pred HcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEE
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (418)
.+.+-|-+|....--. ....|-|+.- +|-.=|-.||-+++.- . .+++.+ ....-|-..|++
T Consensus 26 ~~~dGVYRI~~~gl~G----------~~Q~GVGv~k--~GVFHTMWHVTrGa~l---~-~~g~~l--~P~wasV~~Dli- 86 (191)
T 3u1j_B 26 ELEEGVYRIKQQGIFG----------KTQVGVGVQK--EGVFHTMWHVTRGAVL---T-HNGKRL--EPNWASVKKDLI- 86 (191)
T ss_dssp CCCSEEEEEEEEETTE----------EEEEEEEEEE--TTEEEEEHHHHTTCCE---E-ETTEEE--CEEEEETTTTEE-
T ss_pred cCCCceEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE---E-ECCcEe--cceeecceecee-
Confidence 5677889998743221 1235666665 5889999999988542 1 233332 223445566653
Q ss_pred EEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCC
Q 014786 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (418)
Q Consensus 204 Lkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 280 (418)
..-.+ -+|. ..=.-.++|.++-++-+.... ...|++. . .. .++-.+.....+|.||
T Consensus 87 -sYGG~------WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~-------~-~~----g~iGaV~lD~p~GTSG 145 (191)
T 3u1j_B 87 -SYGGG------WRLS--AQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQ-------T-TT----GEIGAIALDFKPGTSG 145 (191)
T ss_dssp -EESSS------CCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEE-------C-SS----CEEEEECCCCCTTCTT
T ss_pred -ecCCc------ccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEE-------c-CC----CeEEEEECCCCCCCCC
Confidence 34332 1121 111223667777776554432 2223221 0 01 1233444455689999
Q ss_pred CceeCCCceEEEEEe
Q 014786 281 GPLLDSSGSLIGINT 295 (418)
Q Consensus 281 GPl~n~~G~VVGI~s 295 (418)
+|++|.+|+|||+.-
T Consensus 146 SPIin~~G~VVGLYG 160 (191)
T 3u1j_B 146 SPIINREGKVVGLYG 160 (191)
T ss_dssp CEEECTTSCEEEECC
T ss_pred CceecCCCcEEEEec
Confidence 999999999999954
No 339
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=92.30 E-value=0.19 Score=43.35 Aligned_cols=114 Identities=19% Similarity=0.253 Sum_probs=62.8
Q ss_pred eEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEE
Q 014786 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVY 231 (418)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~ 231 (418)
..|-|+.- +|-.=|-.||-+++.- ..+++.+ ....-|-..|++ ..-.+ . +|. ..-.-+++|.
T Consensus 20 Q~GVGv~~--~GVFHTmWHVTrGa~l----~~~g~~~--~P~wa~V~~Dli--sYGG~---W---kL~--~kW~g~~eVq 81 (172)
T 2fp7_B 20 QAGAGVMV--EGVFHTLWHTTKGAAL----MSGEGRL--DPYWGSVKEDRL--CYGGP---W---KLQ--HKWNGHDEVQ 81 (172)
T ss_dssp EEEEEEEE--TTEEEEEHHHHTTCCE----EETTEEE--CEEEEETTTTEE--EESSS---C---CCC--CCCCSSSCEE
T ss_pred eeeeEEee--CCEEEeeeeecCCceE----EECCcEe--cceeehheecee--ecCCc---c---ccC--cccCCCceEE
Confidence 36777766 5889999999988542 1234332 222445556653 33332 1 121 1223346666
Q ss_pred EEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCceeCCCceEEEEEe
Q 014786 232 AIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINT 295 (418)
Q Consensus 232 ~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s 295 (418)
++-++.+.... ...|+..-. . .+.-.+.....+|.||+|++|.+|+|||+.-
T Consensus 82 l~a~~Pgk~~~n~qt~Pg~f~~~--------~----GeigaI~lD~p~GtSGSPIin~~G~vVGLYG 136 (172)
T 2fp7_B 82 MIVVEPGKNVKNVQTKPGVFKTP--------E----GEIGAVTLDYPTGTSGSPIVDKNGDVIGLYG 136 (172)
T ss_dssp EEECCTTSCCEEEEECCEEEEET--------T----EEEEEECCCCCGGGTTCEEECTTSCEEEESC
T ss_pred EEEECCCCceEEEEccCceEecC--------C----CeEEEEECCCCCCCCCCceEccCCcEEEEec
Confidence 66665554321 122222100 0 1233334456689999999999999999954
No 340
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=92.26 E-value=0.21 Score=43.53 Aligned_cols=134 Identities=18% Similarity=0.213 Sum_probs=74.0
Q ss_pred HcCCceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEE
Q 014786 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (418)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (418)
++.+-|-+|....--+ ....|-|+.- +|-.=|-.||-+++.- ..+++.+ ....-|-..|++
T Consensus 16 ~l~dGvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~L----~~~g~~l--~P~wasV~~Dli- 76 (185)
T 2ggv_B 16 DTTTGVYRIMTRGLLG----------SYQAGAGVMV--EGVFHTLWATTKGAAL----MSGEGRL--DPYWGSVKEDRL- 76 (185)
T ss_dssp CCCSEEEEEEEECSSS----------EEEEEEEEEE--TTEEEECHHHHTTCCE----EETTEEE--CEEEEETTTTEE-
T ss_pred cCCCcEEEEEeccccc----------cceeeeEEee--CCEEEeeeeecCcceE----EECCcEe--cceeehhhccee-
Confidence 3567788887643211 1235677665 5889999999988542 1234332 222445556653
Q ss_pred EEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCC
Q 014786 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (418)
Q Consensus 204 Lkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SG 280 (418)
..-.+ . +|. ..-.-+++|.++-++-+.... ...|+..- .. .+.-.+...+.+|.||
T Consensus 77 -sYGG~---W---kL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~--------~~----GeigAI~lD~p~GTSG 135 (185)
T 2ggv_B 77 -CYGGP---W---QLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKT--------PE----GEIGAVTLDFPTGTSG 135 (185)
T ss_dssp -EESSS---C---CCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEE--------TT----EEEEEECCCCCGGGTT
T ss_pred -ecCCc---c---cCc--cccCCCceEEEEEECCCCceEEEEccCceEec--------CC----CeEEEEECCCCCCCCC
Confidence 33332 1 121 123335666666665554321 12222210 01 1233344456689999
Q ss_pred CceeCCCceEEEEEeee
Q 014786 281 GPLLDSSGSLIGINTAI 297 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~ 297 (418)
+|++|.+|+|||+.--+
T Consensus 136 SPIin~~G~vvGLYGNG 152 (185)
T 2ggv_B 136 SPIVDKNGDVIGLYGNG 152 (185)
T ss_dssp CEEECTTSCEEEEEEEE
T ss_pred CceEcCCCcEEEEecce
Confidence 99999999999997644
No 341
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=91.70 E-value=0.32 Score=43.94 Aligned_cols=128 Identities=19% Similarity=0.264 Sum_probs=70.2
Q ss_pred ceEEEEeeecccCccccccccCCCeEEEEEEEcCCcEEEecccccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEec
Q 014786 128 SVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (418)
Q Consensus 128 SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (418)
-|-+|....--+ ....|-|+.- +|-.=|-.||-+++.- . .+++.+ ....-|-..|+ +..-
T Consensus 71 GvYRI~~~gl~G----------~~Q~GVGv~~--~GVFHTmWHVTrGa~l---~-~~g~~~--~P~wa~V~~Dl--isYG 130 (236)
T 3lkw_A 71 GIYRILQRGLLG----------RSQVGVGVFQ--EGVFHTMWHVTRGAVL---M-YQGKRL--EPSWASVKKDL--ISYG 130 (236)
T ss_dssp EEEEEEEEETTE----------EEEEEEEEEE--TTEEEECHHHHTTCCE---E-ETTEEE--CEEEEETTTTE--EEES
T ss_pred cEEEEEeccccc----------cceeeeEEee--CCEEEEeeeecCcceE---E-ECCcEe--cceeehheece--eecC
Confidence 677776643211 1235666665 5889999999988542 1 233332 22244555665 3343
Q ss_pred CCCCCCcccccCCCCCCCCCCEEEEEeCCCCCCCc---eeEeEEeeeeeeecccCCCCCcccEEEEccccCCCCCCCcee
Q 014786 208 APKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLL 284 (418)
Q Consensus 208 ~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~~~~i~~G~SGGPl~ 284 (418)
.+ -.|. ..=.-.++|.++-++.+.... ...|+..-. . .+.-.+.....+|.||+|++
T Consensus 131 G~------WkL~--~~W~g~~eVqv~A~~Pg~~~~~~qt~PG~~~~~--------~----g~igav~lD~p~GTSGSPIi 190 (236)
T 3lkw_A 131 GG------WRFQ--GSWNAGEEVQVIAVEPGKNPKNVQTAPGTFKTP--------E----GEVGAIALDFKPGTAGSPIV 190 (236)
T ss_dssp SS------CCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEET--------T----EEEEEECCCCCTTCTTCEEE
T ss_pred CC------ccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC--------C----CeEEEEECCCCCCCCCCcee
Confidence 32 1121 111223667777776654432 223332210 1 12333444556899999999
Q ss_pred CCCceEEEEEe
Q 014786 285 DSSGSLIGINT 295 (418)
Q Consensus 285 n~~G~VVGI~s 295 (418)
|.+|+|||+.-
T Consensus 191 n~~G~VvGLYG 201 (236)
T 3lkw_A 191 NREGKIVGLYG 201 (236)
T ss_dssp CTTSCEEEESC
T ss_pred cCCCcEEEEec
Confidence 99999999954
No 342
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=91.29 E-value=0.69 Score=39.21 Aligned_cols=135 Identities=16% Similarity=0.208 Sum_probs=72.2
Q ss_pred CeEEEEEEEcCCcEEEecccccC-CCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCC-CCCcccccCCCCCCCCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQ 228 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~~l~~~~~~~~G~ 228 (418)
-+.|-||-|+.. ..+|+-||+. +.+++. |. +...+..+..-+++.+++..+. .++....|... ...|+
T Consensus 14 fgsgwgfwVS~~-~fiTaTHV~p~~~~eif-----G~--p~~~i~v~~~GEf~~~rfp~~~rpdvsgmiLEeg--~peGt 83 (185)
T 4ash_A 14 FGTGWGFWVSGH-VFITAKHVAPPKGTEIF-----GR--KPGDFTVTSSGDFLKYYFTSAVRPDIPAMVLENG--CQEGV 83 (185)
T ss_dssp ETTEEEEESSSS-EEEEEGGGSCCTTCCBT-----TB--CTTSEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTC
T ss_pred ccCceEEEEccc-EEEEEEeecCCCchhhc-----CC--ccceEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCc
Confidence 357899999986 9999999994 444321 10 1111233445588888887643 23455555322 33377
Q ss_pred EEEEE-eCCCCCC--CceeEeEEeeeeeeecccCCCCCcccEEE-------EccccCCCCCCCceeCCCc---eEEEEEe
Q 014786 229 KVYAI-GNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQ-------TDAAINPGNSGGPLLDSSG---SLIGINT 295 (418)
Q Consensus 229 ~V~~v-G~p~g~~--~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~-------~~~~i~~G~SGGPl~n~~G---~VVGI~s 295 (418)
-+.+. -.+.+.. ..+.-|.+....-.-.. . .....++. .|-...||+-|.|-+-..| -|+||++
T Consensus 84 V~svlikR~sgeliPlavRmgt~as~kIqGk~-v--~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHt 160 (185)
T 4ash_A 84 VASVLVKRASGEMLALAVRMGSQAAIKIGSAV-V--HGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHV 160 (185)
T ss_dssp EEEEEEECTTCCEEEEEEEEEEEEEEEETTEE-E--EEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCcceeEEEecceeeeEEeeeE-e--cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEE
Confidence 65553 3333321 12333333322111000 0 00112222 2445679999999986544 4999999
Q ss_pred eee
Q 014786 296 AIY 298 (418)
Q Consensus 296 ~~~ 298 (418)
+..
T Consensus 161 Aat 163 (185)
T 4ash_A 161 AAT 163 (185)
T ss_dssp EEC
T ss_pred eec
Confidence 864
No 343
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=90.13 E-value=0.35 Score=39.91 Aligned_cols=41 Identities=24% Similarity=0.399 Sum_probs=29.7
Q ss_pred EEEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeec
Q 014786 268 IQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 268 i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
..-...-.+|+||-|++|..|+||+|+-.+. +++..-++++
T Consensus 97 tip~G~g~~GdSGrpI~Dn~GrVVaIVlGGa-----~eg~rtaLSV 137 (157)
T 1ep5_B 97 TVPKGVGAKGDSGRPILDNQGRVVAIVLGGV-----NEGSRTALSV 137 (157)
T ss_dssp EEETTCCCTTCTTCEEECTTSCEEEEEEEEE-----EETTEEEEEE
T ss_pred EeccCCCCCCCCCCccCcCCCcEEEEEecCC-----CCCCceeEEE
Confidence 3344556799999999999999999997663 3444445433
No 344
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=89.76 E-value=0.45 Score=38.81 Aligned_cols=31 Identities=29% Similarity=0.487 Sum_probs=25.2
Q ss_pred EEEccccCCCCCCCceeCCCceEEEEEeeee
Q 014786 268 IQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (418)
Q Consensus 268 i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~ 298 (418)
..-...-.+|+||-|++|..|+||+|+-.+.
T Consensus 90 tvp~G~g~~GdSGrpI~Dn~GrVVaIVlGG~ 120 (149)
T 1vcp_A 90 TIPTGAGKPGDSGRPIFDNKGRVVAIVLGGA 120 (149)
T ss_dssp EEETTSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred EecccCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 3344456799999999999999999998764
No 345
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=89.58 E-value=0.46 Score=39.22 Aligned_cols=29 Identities=38% Similarity=0.595 Sum_probs=24.5
Q ss_pred EccccCCCCCCCceeCCCceEEEEEeeee
Q 014786 270 TDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (418)
Q Consensus 270 ~~~~i~~G~SGGPl~n~~G~VVGI~s~~~ 298 (418)
-.....+|+||-|++|..|+||+|+-.+.
T Consensus 100 p~g~g~~GdSGrPi~Dn~GrVVaIVlGG~ 128 (158)
T 4agk_A 100 PTGAGGPGDSGRPILDNSGKVVAIVLGGA 128 (158)
T ss_dssp ETTSSCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred ecccCCCCCCCCccccCCCCEEEEEecCC
Confidence 34456789999999999999999998764
No 346
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=89.13 E-value=0.45 Score=42.76 Aligned_cols=39 Identities=26% Similarity=0.517 Sum_probs=29.0
Q ss_pred EccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeec
Q 014786 270 TDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 270 ~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
-...-.+|+||-|++|..|+||+|+-.+. ++|-..|+++
T Consensus 196 p~G~G~~GDSGRpI~DN~GrVVaIVLGGa-----nEG~RTaLSV 234 (253)
T 2yew_A 196 PTGSGKPGDSGRPIFDNTGKVVAIVLGGA-----NEGARTALSV 234 (253)
T ss_dssp ETTSCCSSCTTCEEECSSCBEEEEEEEEE-----ECSSEEEEEE
T ss_pred ccCCCCCCCCCCccccCCCcEEEEEecCC-----CcCCceeEEE
Confidence 34455689999999999999999998764 3444455543
No 347
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=88.82 E-value=0.56 Score=38.83 Aligned_cols=30 Identities=23% Similarity=0.402 Sum_probs=24.7
Q ss_pred EEccccCCCCCCCceeCCCceEEEEEeeee
Q 014786 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (418)
Q Consensus 269 ~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~ 298 (418)
.-...-.+|+||-|++|..|+||+|+-.+.
T Consensus 100 vp~GvG~~GDSGRpI~DN~GrVVaivlgg~ 129 (161)
T 1svp_A 100 IPRGVGGRGDAGRPIMDNSGRVVAIVLGGA 129 (161)
T ss_dssp EETTSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred ecccCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 334455789999999999999999998764
No 348
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=87.62 E-value=0.56 Score=42.51 Aligned_cols=40 Identities=25% Similarity=0.410 Sum_probs=29.2
Q ss_pred EEccccCCCCCCCceeCCCceEEEEEeeeeCCCCCCCCccceeec
Q 014786 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (418)
Q Consensus 269 ~~~~~i~~G~SGGPl~n~~G~VVGI~s~~~~~~~~~~~~~~aIp~ 313 (418)
.-...-.+|+||-|++|..|+||+|+-.+. ++|-..|+++
T Consensus 205 vp~G~G~~GDSGRpI~DN~GrVVaIVLGGa-----neG~RTaLSV 244 (264)
T 1kxf_A 205 IPRGVGGRGDSGRPIMDNSGRVVAIVLGGA-----DEGTRTALSV 244 (264)
T ss_dssp EETTSCCTTCTTCEEECTTSCEEEEEEEEE-----EETTEEEEEE
T ss_pred ecccCCCCCCCCCccccCCCcEEEEEecCC-----CcCCceeEEE
Confidence 334455689999999999999999998763 3444455443
No 349
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=86.64 E-value=2.4 Score=36.11 Aligned_cols=136 Identities=18% Similarity=0.268 Sum_probs=71.2
Q ss_pred CeEEEEEEEcCCcEEEecccccC-CCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCC-CCCcccccCCCCCCCCCC
Q 014786 151 QGSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQ 228 (418)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~~l~~~~~~~~G~ 228 (418)
-+.|-||-|++. ..+|+-||+. +.+++. | .+...+.++..-+++.+++..+. .++.-+.|... ...|+
T Consensus 25 fgsgwgfwVS~~-~fIT~tHV~p~~~~e~f-----G--~p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEeg--~peGt 94 (194)
T 2fyq_A 25 FGSGWGFWVSPT-VFITTTHVVPTGVKEFF-----G--EPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEG--CPEGT 94 (194)
T ss_dssp ETTEEEEESSSS-EEEEEGGGSCSSCSEET-----T--EEGGGEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTC
T ss_pred ccCceeEEEccc-EEEEEeeecCCCChhhc-----C--ceeeeEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCc
Confidence 357889999986 9999999994 444432 1 11112234445578888887643 23444455322 33366
Q ss_pred EEEEE-eCCCCCC--CceeEeEEeeeeeeecccCCCCCcccEEE-------EccccCCCCCCCceeCCCc---eEEEEEe
Q 014786 229 KVYAI-GNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQ-------TDAAINPGNSGGPLLDSSG---SLIGINT 295 (418)
Q Consensus 229 ~V~~v-G~p~g~~--~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~-------~~~~i~~G~SGGPl~n~~G---~VVGI~s 295 (418)
-+.++ -.+.+.. ..+..|.+....-.-... .....++. .|-...||+-|.|-+-..| -|+||++
T Consensus 95 V~silikR~sgellPlaVRmgt~as~kIqGk~v---~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~ 171 (194)
T 2fyq_A 95 VCSVLIKRDSGELLPLAVRMGAIASMRIQGRLV---HGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHA 171 (194)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEEEEEEETTEEE---EEEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEE
T ss_pred EEEEEEecCCCCcceEEEEecceeeeEEeeeEe---cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEE
Confidence 55443 3443322 134444443222110000 00112222 2334568999999986544 4999999
Q ss_pred eeeC
Q 014786 296 AIYS 299 (418)
Q Consensus 296 ~~~~ 299 (418)
+...
T Consensus 172 Aatr 175 (194)
T 2fyq_A 172 AATK 175 (194)
T ss_dssp EECS
T ss_pred eecc
Confidence 7643
No 350
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=73.93 E-value=1.3 Score=38.77 Aligned_cols=26 Identities=35% Similarity=0.600 Sum_probs=21.9
Q ss_pred ccCCCCCCCceeCCCceEEEEEeeee
Q 014786 273 AINPGNSGGPLLDSSGSLIGINTAIY 298 (418)
Q Consensus 273 ~i~~G~SGGPl~n~~G~VVGI~s~~~ 298 (418)
....|.||||++...|.+|||-.+..
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav 179 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAV 179 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEE
T ss_pred eeccCCCCCceecCCCCEEEEEEEEE
Confidence 34579999999999999999986544
No 351
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=57.19 E-value=38 Score=23.78 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=33.6
Q ss_pred cCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCC
Q 014786 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (418)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (418)
+...+++.++..||.-|.++++.++...+-++++++..
T Consensus 4 f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred cccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 44567888999999999999999999999999999874
No 352
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=49.15 E-value=55 Score=23.92 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=29.5
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+++.++|...++.+=....
T Consensus 15 k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 468899999999999999999999999887755
No 353
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=47.24 E-value=63 Score=23.34 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=32.8
Q ss_pred cCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCC
Q 014786 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (418)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (418)
+...+.+..+..||.-|+|+|+.++....-+++++...
T Consensus 14 f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 14 FEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp SCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 34456788888999999999999999999999999863
No 354
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=45.74 E-value=35 Score=24.83 Aligned_cols=33 Identities=15% Similarity=0.412 Sum_probs=29.4
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+++.++|...++.+=....
T Consensus 15 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 578999999999999999999999998877754
No 355
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=45.71 E-value=39 Score=24.70 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=29.5
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+++.++|...++.+=.+..
T Consensus 15 ~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 15 SPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 578999999999999999999999998877754
No 356
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=44.39 E-value=38 Score=25.16 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=29.7
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+++.++|...++.+=....
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 568999999999999999999999999887765
No 357
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=43.47 E-value=36 Score=25.85 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=29.3
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+.+.++|...++.|=....
T Consensus 15 k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 568999999999999999999999998877654
No 358
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=41.86 E-value=45 Score=24.87 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=29.5
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+++.++|...++.|=....
T Consensus 26 ~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 478999999999999999999999998877754
No 359
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=40.51 E-value=53 Score=23.99 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.5
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|+.|.+++.++|...++.+=.+..
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 468899999999999999999999999887754
No 360
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=40.30 E-value=13 Score=32.85 Aligned_cols=23 Identities=39% Similarity=0.697 Sum_probs=20.0
Q ss_pred CCCCCCCceeCCCceEEEEEeee
Q 014786 275 NPGNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 275 ~~G~SGGPl~n~~G~VVGI~s~~ 297 (418)
..|.||+||+.+.|++|||....
T Consensus 146 ykGssgaPllCe~gh~vGly~~~ 168 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAA 168 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEE
T ss_pred EeCCCCCceeccCCceeeEEEEE
Confidence 56889999999999999987653
No 361
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=40.01 E-value=69 Score=24.40 Aligned_cols=32 Identities=16% Similarity=0.399 Sum_probs=28.0
Q ss_pred CeEEEEeCCCcEEEEEEEEEcC-CCCeEEEEec
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQ-DKDVAVLRID 207 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~-~~DlAlLkv~ 207 (418)
.++.|.+.||+.|.+.+..+|+ ...+.|+...
T Consensus 18 KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 18 KEVRVTASEKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEEcCCCEEEEEEEEECCCceEEEEeecc
Confidence 5789999999999999999995 5699999873
No 362
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=38.89 E-value=56 Score=24.65 Aligned_cols=33 Identities=12% Similarity=0.182 Sum_probs=29.2
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|+.|.+++.++|...++.|=.+..
T Consensus 17 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 49 (86)
T 3s6n_F 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEE 49 (86)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCeEEEEEEEEEcCceEEEEeeEEE
Confidence 578999999999999999999999998877653
No 363
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=38.82 E-value=13 Score=31.12 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=19.2
Q ss_pred CCCCCCceeCCCceEEEEEeee
Q 014786 276 PGNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 276 ~G~SGGPl~n~~G~VVGI~s~~ 297 (418)
.+.++-|++|.+|+++|+++..
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGG
T ss_pred cCCeEEEEEcCCccEEEEEEHH
Confidence 5788999999999999999853
No 364
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=38.62 E-value=43 Score=24.42 Aligned_cols=33 Identities=12% Similarity=0.263 Sum_probs=28.6
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+++.++|...++.+=....
T Consensus 15 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 4emk_B 15 KKVLIRLSSGVDYKGILSCLDGYMNLALERTEE 47 (75)
T ss_dssp SEEEEECTTSCEEEEEEEEECTTCEEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCcceEEEccEEE
Confidence 578899999999999999999999888776643
No 365
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=37.70 E-value=60 Score=23.71 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.2
Q ss_pred CeEEEEeCCC-cEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+| +.+.+++.++|...++.+=.+..
T Consensus 16 ~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 5688999999 99999999999999998877754
No 366
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=37.30 E-value=57 Score=25.01 Aligned_cols=33 Identities=6% Similarity=0.232 Sum_probs=29.4
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|+.|.+.+.++|...++.|=....
T Consensus 20 ~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 20 EIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 578999999999999999999999998877754
No 367
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=37.07 E-value=43 Score=24.87 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=29.3
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+.+.++|...++.|=....
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 478999999999999999999999998877754
No 368
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=36.45 E-value=59 Score=25.98 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=29.4
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+.+.++|...+|.|=....
T Consensus 34 k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 578899999999999999999999998877654
No 369
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=36.24 E-value=57 Score=25.15 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=29.0
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|+.|.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 478999999999999999999999998876654
No 370
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=34.98 E-value=51 Score=25.42 Aligned_cols=33 Identities=6% Similarity=0.166 Sum_probs=29.3
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||+.+.+.+.++|...++.|=....
T Consensus 21 k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 21 ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp SEEEEEEGGGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCCCcEEEcCEEE
Confidence 578999999999999999999999998877654
No 371
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=34.73 E-value=70 Score=25.71 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=41.0
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCCCCCCCCEEEEEeCCCC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~~~~~G~~V~~vG~p~g 238 (418)
..+.|.+.+|..|.+++..+|...++.|=.+......-....++ .-+--|+.|..+.-|..
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 57889999999999999999999999887775421111122222 11334666776666644
No 372
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=34.24 E-value=58 Score=27.84 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=24.4
Q ss_pred cEEEEccccCCCCCCCceeCCCceEEEEEeee
Q 014786 266 DVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 266 ~~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~ 297 (418)
.++.-..+..||+=||.|... .-||||++++
T Consensus 113 ~vl~~~G~~epGDCGG~L~C~-HGviGivTaG 143 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILRCE-HGVIGLVTMG 143 (166)
T ss_dssp SEEEEECSSSCCCCBSEEECS-SSEEEEEEEE
T ss_pred cEEEEecCCCCCCCCceeeeC-CCceEEEecC
Confidence 344455678899999999964 4599999986
No 373
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=33.53 E-value=64 Score=25.86 Aligned_cols=34 Identities=6% Similarity=0.261 Sum_probs=30.4
Q ss_pred CCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 175 ASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 175 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 3678999999999999999999999999887764
No 374
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=32.98 E-value=62 Score=27.01 Aligned_cols=30 Identities=37% Similarity=0.584 Sum_probs=23.8
Q ss_pred EEEEccccCCCCCCCceeCCCceEEEEEeee
Q 014786 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 267 ~i~~~~~i~~G~SGGPl~n~~G~VVGI~s~~ 297 (418)
++.-..+..||+=||.|.- +.-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~C-~HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLLC-KHGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceeee-CCCceEEEecC
Confidence 4444567889999999995 45699999986
No 375
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=32.37 E-value=77 Score=24.96 Aligned_cols=33 Identities=9% Similarity=0.216 Sum_probs=29.3
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|+.|.+++.++|...++.|=.+..
T Consensus 27 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~e 59 (105)
T 4emh_A 27 RPILVELKNGETFNGHLENCDNYMNLTLREVIR 59 (105)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEcCCceEEEEEEEE
Confidence 568999999999999999999999998877753
No 376
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=31.80 E-value=50 Score=29.96 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=28.4
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.||++|.+++..+|...+|.|=.+++
T Consensus 15 KrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CeEEEEECCCcEEEEEEEEEcccccEEecCEEE
Confidence 468899999999999999999999888766544
No 377
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=31.13 E-value=21 Score=29.71 Aligned_cols=22 Identities=9% Similarity=0.154 Sum_probs=18.7
Q ss_pred CCCCCCCceeCCCceEEEEEee
Q 014786 275 NPGNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 275 ~~G~SGGPl~n~~G~VVGI~s~ 296 (418)
..|.|+=|++|.+|+++|+++.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 4689999999999999999875
No 378
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=29.76 E-value=24 Score=29.28 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.3
Q ss_pred CceeCCCceEEEEEee
Q 014786 281 GPLLDSSGSLIGINTA 296 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~ 296 (418)
-|++|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 5899999999999885
No 379
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=29.48 E-value=63 Score=23.97 Aligned_cols=36 Identities=17% Similarity=0.348 Sum_probs=30.2
Q ss_pred CCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCC
Q 014786 174 GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (418)
Q Consensus 174 ~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (418)
..+++.++..||.-|.++++.++...+-++++++..
T Consensus 29 eGeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 29 EGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TTCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred cCCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 345666777899999999999999999999999874
No 380
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=29.26 E-value=78 Score=24.26 Aligned_cols=34 Identities=12% Similarity=0.206 Sum_probs=29.7
Q ss_pred CCeEEEEeCCC-cEEEEEEEEEcCCCCeEEEEecC
Q 014786 175 ASDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 175 ~~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
...+.|.+.+| +.|.+++.++|...++.|=.+..
T Consensus 31 ~k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 36789999999 99999999999999998877654
No 381
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=29.17 E-value=25 Score=27.56 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44457899999999999885
No 382
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=28.10 E-value=27 Score=27.88 Aligned_cols=21 Identities=24% Similarity=0.294 Sum_probs=16.7
Q ss_pred CCCCCceeCCCceEEEEEeee
Q 014786 277 GNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~~ 297 (418)
+..--|++|.+|+++||++..
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~~ 119 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTIE 119 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEeCCCCEEEEEEHH
Confidence 344578999999999999853
No 383
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=27.94 E-value=28 Score=27.27 Aligned_cols=19 Identities=32% Similarity=0.382 Sum_probs=15.4
Q ss_pred CCCCceeCCCceEEEEEee
Q 014786 278 NSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 278 ~SGGPl~n~~G~VVGI~s~ 296 (418)
...-|++|.+|+++|+++.
T Consensus 99 ~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 99 CSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SSEEEEECTTCBEEEEEEH
T ss_pred CcEEEEECCCCCEEEEEEH
Confidence 3346899999999999875
No 384
>2e5p_A Protein PHF1, PHD finger protein 1; tudor domain, PHF1 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.41 E-value=1.7e+02 Score=21.01 Aligned_cols=37 Identities=16% Similarity=0.324 Sum_probs=32.2
Q ss_pred CCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCC
Q 014786 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (418)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (418)
...+++..+..||.-|.+++..++....-++++++..
T Consensus 11 ~eGqdVLarWsDGlfYlGtV~kV~~~~~~ClV~FeD~ 47 (68)
T 2e5p_A 11 WEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 47 (68)
T ss_dssp CTTCEEEEECTTSSEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCEEEEEecCCcEEEeEEEEEecCCcEEEEEEccC
Confidence 3456778889999999999999999999999999864
No 385
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=27.39 E-value=28 Score=27.54 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=16.1
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 34457889999999999885
No 386
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=27.14 E-value=29 Score=27.34 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 44557889999999999875
No 387
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=26.60 E-value=29 Score=27.38 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=15.2
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44457889989999999875
No 388
>2xk0_A Polycomb protein PCL; transcription, aromatic CAGE; NMR {Drosophila melanogaster}
Probab=25.70 E-value=1.5e+02 Score=21.53 Aligned_cols=38 Identities=24% Similarity=0.306 Sum_probs=30.1
Q ss_pred cccCCCCeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecCC
Q 014786 170 HVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (418)
Q Consensus 170 Hvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (418)
+.+...+++.++..||.-|-++++ |...+=++++++..
T Consensus 14 ~~~~~geDVL~rw~DG~fYLGtIV--d~~~~~ClV~FeD~ 51 (69)
T 2xk0_A 14 VTYALQEDVFIKCNDGRFYLGTII--DQTSDQYLIRFDDQ 51 (69)
T ss_dssp CCCCTTCEEEEECTTSCEEEEEEE--EECSSCEEEEETTC
T ss_pred cccccCCeEEEEecCCCEEEEEEE--ecCCceEEEEecCC
Confidence 445566778889999999999994 55678899999874
No 389
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=24.93 E-value=90 Score=24.59 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=29.4
Q ss_pred EEEEEEEEcCCCCeEEEEecCCCCCCcccccCCCC-CCCCCCEEEE-EeC
Q 014786 188 YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSA-DLLVGQKVYA-IGN 235 (418)
Q Consensus 188 ~~a~vv~~d~~~DlAlLkv~~~~~~~~~~~l~~~~-~~~~G~~V~~-vG~ 235 (418)
++++++..+...++|++.+... ...+.+.--. ++++||+|++ +||
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv---~reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGV---RRDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTE---EEEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCE---EEEEEEEeecCCCCCCCEEEEeech
Confidence 5788888875558999988652 2223332222 4788999887 565
No 390
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=24.65 E-value=36 Score=26.16 Aligned_cols=20 Identities=35% Similarity=0.556 Sum_probs=16.2
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+.+--|++|.+|+++|+++.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 44557899988999999875
No 391
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=24.20 E-value=40 Score=27.01 Aligned_cols=18 Identities=39% Similarity=0.783 Sum_probs=14.8
Q ss_pred CceeCCCceEEEEEeeee
Q 014786 281 GPLLDSSGSLIGINTAIY 298 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~~ 298 (418)
.|++|.+|++||+++.++
T Consensus 106 ~PV~~~~g~viGvv~vg~ 123 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGY 123 (131)
T ss_dssp EEEECTTCCEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEE
Confidence 478887899999998664
No 392
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=23.94 E-value=33 Score=27.95 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 115 ~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 115 RVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp TCSCEEEECTTSCEEEEECH
T ss_pred CCcEEEEEeCCCCEEEEeeH
Confidence 44457899999999999875
No 393
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=23.93 E-value=35 Score=27.49 Aligned_cols=20 Identities=20% Similarity=0.157 Sum_probs=16.2
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44456899999999999875
No 394
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=23.87 E-value=35 Score=27.99 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.0
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEECCCCCEEEEEEH
Confidence 34456899999999999875
No 395
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=23.54 E-value=70 Score=25.77 Aligned_cols=32 Identities=16% Similarity=0.362 Sum_probs=27.8
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEec
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (418)
..+.|.+.||+.+.+++.++|...++.|=.+.
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceEE
Confidence 46899999999999999999999998876554
No 396
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=23.42 E-value=1.3e+02 Score=24.63 Aligned_cols=33 Identities=9% Similarity=0.340 Sum_probs=29.9
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|+.+.+++.++|...++.|=....
T Consensus 11 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E 43 (130)
T 1m5q_A 11 REVQVVLSNGEVYKGVLHAVDNQLNIVLANASN 43 (130)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEC
T ss_pred CeEEEEECCCcEEEEEEEEEcccceeEEeeEEE
Confidence 568899999999999999999999999888765
No 397
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=22.86 E-value=2e+02 Score=20.06 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=26.7
Q ss_pred CCeEEEEe-CCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 175 ASDIRVTF-ADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 175 ~~~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
.+.+...+ .||+.|.|++...+.+.+-+.+.+..
T Consensus 12 Gd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 12 GDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 44566676 59999999999999877778777764
No 398
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=22.85 E-value=39 Score=27.13 Aligned_cols=16 Identities=25% Similarity=0.198 Sum_probs=14.1
Q ss_pred CceeCCCceEEEEEee
Q 014786 281 GPLLDSSGSLIGINTA 296 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~ 296 (418)
-|++|.+|+++||++.
T Consensus 119 l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTR 134 (150)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEECCCCcEEEEEEH
Confidence 6889989999999875
No 399
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=22.41 E-value=41 Score=26.57 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=15.9
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+...-|++|.+|+++||++.
T Consensus 113 ~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 113 RVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCCEEEEEEH
Confidence 34457899989999999875
No 400
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=22.33 E-value=39 Score=29.51 Aligned_cols=20 Identities=35% Similarity=0.493 Sum_probs=16.5
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--||+|.+|+++||++.
T Consensus 146 ~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 146 REIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEEcCCCeEEEEEEH
Confidence 44557999999999999875
No 401
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=22.11 E-value=1.7e+02 Score=23.74 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.6
Q ss_pred CeEEEEeCCCcEEEEEEEEEcCCCCeEEEEecC
Q 014786 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (418)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (418)
..+.|.+.+|..|.+++..+|...++.|-.+..
T Consensus 16 k~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~e 48 (126)
T 2y9a_D 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (126)
T ss_dssp CEEEEEESSCCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEcCceEEEEeeEEE
Confidence 468899999999999999999999999887764
No 402
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=21.55 E-value=44 Score=26.64 Aligned_cols=20 Identities=40% Similarity=0.567 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+.+--|++|.+|+++||++.
T Consensus 115 ~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 115 KYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp SCCEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCcEEEEEEH
Confidence 44556899989999999875
No 403
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=21.39 E-value=43 Score=26.15 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=15.9
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+...-|++|.+|+++|+++.
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEECCCCeEEEEEEH
Confidence 34456899989999999875
No 404
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=21.29 E-value=44 Score=27.08 Aligned_cols=14 Identities=43% Similarity=0.771 Sum_probs=0.0
Q ss_pred ceeCCCceEEEEEe
Q 014786 282 PLLDSSGSLIGINT 295 (418)
Q Consensus 282 Pl~n~~G~VVGI~s 295 (418)
|++|.+|+++||++
T Consensus 119 pVvd~~g~~~Giit 132 (156)
T 3ctu_A 119 PVVDAEGIFQGIIT 132 (156)
T ss_dssp EEECTTSBEEEEEE
T ss_pred EEEcCCCeEEEEEE
No 405
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=20.59 E-value=46 Score=26.43 Aligned_cols=21 Identities=14% Similarity=0.265 Sum_probs=16.3
Q ss_pred CCCCCceeCCCceEEEEEeee
Q 014786 277 GNSGGPLLDSSGSLIGINTAI 297 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~~ 297 (418)
+..--|++|.+|+++|+++..
T Consensus 100 ~~~~l~Vvd~~g~~~Giit~~ 120 (141)
T 2rih_A 100 NIRHVVVVNKNGELVGVLSIR 120 (141)
T ss_dssp TCSEEEEECTTSCEEEEEEHH
T ss_pred CCeEEEEEcCCCcEEEEEEHH
Confidence 344568899899999998853
No 406
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=20.57 E-value=46 Score=27.52 Aligned_cols=21 Identities=38% Similarity=0.509 Sum_probs=17.1
Q ss_pred CCCCCCceeCCCceEEEEEee
Q 014786 276 PGNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 276 ~G~SGGPl~n~~G~VVGI~s~ 296 (418)
.+..--|++|.+|+++||++.
T Consensus 127 ~~~~~lpVvd~~g~~vGiit~ 147 (180)
T 3sl7_A 127 TKFRRLPVVDADGKLIGILTR 147 (180)
T ss_dssp STTCEEEEECTTCBEEEEEEH
T ss_pred cCCCEEEEECCCCeEEEEEEH
Confidence 455567899999999999875
No 407
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=20.52 E-value=45 Score=27.84 Aligned_cols=20 Identities=30% Similarity=0.355 Sum_probs=16.4
Q ss_pred CCCCCceeCCCceEEEEEee
Q 014786 277 GNSGGPLLDSSGSLIGINTA 296 (418)
Q Consensus 277 G~SGGPl~n~~G~VVGI~s~ 296 (418)
+..--|++|.+|+++||++.
T Consensus 136 ~~~~~pVvd~~g~lvGiit~ 155 (172)
T 3lhh_A 136 GSQMVFVVDEYGDLKGLVTL 155 (172)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEeeH
Confidence 44567899999999999885
No 408
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=20.30 E-value=53 Score=26.75 Aligned_cols=17 Identities=24% Similarity=0.374 Sum_probs=13.8
Q ss_pred CceeCCCceEEEEEeee
Q 014786 281 GPLLDSSGSLIGINTAI 297 (418)
Q Consensus 281 GPl~n~~G~VVGI~s~~ 297 (418)
.|+.|.+|++||+++.+
T Consensus 111 ~PV~~~~g~viGvv~vg 127 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIG 127 (142)
T ss_dssp EEEECTTSCEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEe
Confidence 47887789999998864
No 409
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=20.11 E-value=48 Score=26.78 Aligned_cols=14 Identities=21% Similarity=0.389 Sum_probs=0.0
Q ss_pred ceeCCCceEEEEEe
Q 014786 282 PLLDSSGSLIGINT 295 (418)
Q Consensus 282 Pl~n~~G~VVGI~s 295 (418)
|++|.+|+++||++
T Consensus 128 pVvd~~g~~vGiit 141 (152)
T 2uv4_A 128 VVVDENDVVKGIVS 141 (152)
T ss_dssp EEECTTSBEEEEEE
T ss_pred EEECCCCeEEEEEE
Done!