Your job contains 1 sequence.
>014791
MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ
AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVI
DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI
LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD
QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE
DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE
ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLLLRFLFKSLPLRHSMMLIHV
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014791
(418 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2146945 - symbol:KNAT3 "KNOTTED1-like homeobox... 1122 1.9e-121 2
TAIR|locus:2184911 - symbol:KNAT4 "KNOTTED1-like homeobox... 998 8.2e-110 3
TAIR|locus:2116632 - symbol:KNAT5 "KNOTTED1-like homeobox... 862 1.6e-93 3
TAIR|locus:2015554 - symbol:KNAT7 "KNOTTED-like homeobox ... 739 3.6e-73 1
TAIR|locus:2027089 - symbol:STM "SHOOT MERISTEMLESS" spec... 135 1.2e-15 2
TAIR|locus:2128828 - symbol:KNAT1 "KNOTTED-like from Arab... 131 1.6e-14 2
TAIR|locus:2026810 - symbol:KNAT2 "KNOTTED-like from Arab... 124 3.5e-13 2
UNIPROTKB|P46609 - symbol:OSH1 "Homeobox protein knotted-... 150 5.4e-08 1
>TAIR|locus:2146945 [details] [associations]
symbol:KNAT3 "KNOTTED1-like homeobox gene 3" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009722 "detection of
cytokinin stimulus" evidence=IEP] [GO:0071345 "cellular response to
cytokine stimulus" evidence=IDA] [GO:0048513 "organ development"
evidence=RCA] [GO:0009416 "response to light stimulus"
evidence=IEP] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 Pfam:PF03789 Pfam:PF03790 Pfam:PF03791
Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51213
SMART:SM00389 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009416 EMBL:AC006259
GO:GO:0071345 HOGENOM:HOG000272741 EMBL:X92392 EMBL:AY086091
EMBL:AY120762 EMBL:BT000139 IPI:IPI00547240 RefSeq:NP_197904.1
UniGene:At.5376 ProteinModelPortal:P48000 SMR:P48000 IntAct:P48000
STRING:P48000 PRIDE:P48000 EnsemblPlants:AT5G25220.1 GeneID:832593
KEGG:ath:AT5G25220 GeneFarm:4056 TAIR:At5g25220 eggNOG:NOG326768
InParanoid:P48000 OMA:GENKNDG PhylomeDB:P48000
ProtClustDB:CLSN2686534 Genevestigator:P48000 GO:GO:0009722
Uniprot:P48000
Length = 431
Score = 1122 (400.0 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 237/351 (67%), Positives = 252/351 (71%)
Query: 44 ETTAPNWLNSALLRSXXXXXXXXHFSDTNFLNLRXXXXXXXXXXXXXX-XXXXXXQTPNQ 102
E PNWLN+ALLRS ++ NFLNL NQ
Sbjct: 41 EAPPPNWLNTALLRSSD--------NNNNFLNLHTATANTTTASSSDSPSSAAAAAAANQ 92
Query: 103 WLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLXXXXXXXXXXXXXXXXXXGVVVE 162
WLSR SSS L RN+++ + + D I AD G
Sbjct: 93 WLSR-SSSFLQRNNNN---NASIVGDGIDDVTGGADTMIQGEMKTGGGENKNDGGGA--- 145
Query: 163 SGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSK 222
+ ADGVV+WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+K
Sbjct: 146 TAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAK 205
Query: 223 YSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS 281
YSALGA QGLV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS
Sbjct: 206 YSALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS 265
Query: 282 LTGVSPGEGTGATMSXXXXXXXXXXANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE 341
LTGVSPGEG GATMS AN+FDG L D +GFGPLIPTESERSLMERVRQE
Sbjct: 266 LTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQE 322
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 323 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
Score = 93 (37.8 bits), Expect = 1.9e-121, Sum P(2) = 1.9e-121
Identities = 16/19 (84%), Positives = 17/19 (89%)
Query: 1 MAFHHNHLSQDLPLHHFTD 19
MAFHHNHLSQDL +HFTD
Sbjct: 1 MAFHHNHLSQDLSFNHFTD 19
>TAIR|locus:2184911 [details] [associations]
symbol:KNAT4 "KNOTTED1-like homeobox gene 4" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA;NAS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0048513
"organ development" evidence=RCA] [GO:0009416 "response to light
stimulus" evidence=IEP] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 Pfam:PF03789 Pfam:PF03790 Pfam:PF03791
Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071 PROSITE:PS51213
SMART:SM00389 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009416 eggNOG:NOG302919
EMBL:AL391222 HOGENOM:HOG000272741 ProtClustDB:CLSN2686534
EMBL:X92393 EMBL:AK118296 IPI:IPI00548042 PIR:T51795
RefSeq:NP_196667.2 UniGene:At.5377 ProteinModelPortal:P48001
SMR:P48001 IntAct:P48001 STRING:P48001 PRIDE:P48001
EnsemblPlants:AT5G11060.1 GeneID:830973 KEGG:ath:AT5G11060
GeneFarm:4055 TAIR:At5g11060 InParanoid:P48001 OMA:GGEESMI
PhylomeDB:P48001 Genevestigator:P48001 Uniprot:P48001
Length = 393
Score = 998 (356.4 bits), Expect = 8.2e-110, Sum P(3) = 8.2e-110
Identities = 195/223 (87%), Positives = 203/223 (91%)
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L A Q
Sbjct: 118 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQ 177
Query: 231 GLVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
GL+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGE
Sbjct: 178 GLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE 237
Query: 290 GTGATMSXXXXXXXXXXANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMS A+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQG
Sbjct: 238 GTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQG 294
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 295 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
Score = 76 (31.8 bits), Expect = 8.2e-110, Sum P(3) = 8.2e-110
Identities = 25/79 (31%), Positives = 32/79 (40%)
Query: 69 SDTNFLNLRXXXXXXXXXXXXXXXXXXXXQTPNQWLSRTSSSLLHRNHS---------DV 119
SD NFLNL NQWLSR+SS L N + DV
Sbjct: 43 SDNNFLNLHTAASAAATSSDSPSSAAA-----NQWLSRSSSFLQRGNTANNNNNETSGDV 97
Query: 120 IDDVTPANDSIIAAVESAD 138
I+DV +S+I + A+
Sbjct: 98 IEDVPGGEESMIGEKKEAE 116
Score = 45 (20.9 bits), Expect = 8.2e-110, Sum P(3) = 8.2e-110
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 1 MAFHHNHLSQDLPLHHFTD 19
MAFH+NH + HFTD
Sbjct: 1 MAFHNNHFN------HFTD 13
>TAIR|locus:2116632 [details] [associations]
symbol:KNAT5 "KNOTTED1-like homeobox gene 5" species:3702
"Arabidopsis thaliana" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009727 "detection of ethylene stimulus" evidence=IEP]
[GO:0071369 "cellular response to ethylene stimulus" evidence=IDA]
[GO:0048513 "organ development" evidence=RCA] InterPro:IPR001356
InterPro:IPR005539 InterPro:IPR005540 InterPro:IPR005541
InterPro:IPR008422 InterPro:IPR009057 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009727 EMBL:AL021636
EMBL:AL161580 GO:GO:0071369 HOGENOM:HOG000272741 EMBL:AF306661
EMBL:D43962 EMBL:BT026033 EMBL:X92394 IPI:IPI00534782 PIR:T04641
RefSeq:NP_194932.1 UniGene:At.20704 ProteinModelPortal:P48002
SMR:P48002 IntAct:P48002 STRING:P48002 PRIDE:P48002
EnsemblPlants:AT4G32040.1 GeneID:829335 KEGG:ath:AT4G32040
GeneFarm:4051 TAIR:At4g32040 eggNOG:NOG289289 InParanoid:P48002
OMA:NQVESEV PhylomeDB:P48002 ProtClustDB:CLSN2916152
Genevestigator:P48002 GermOnline:AT4G32040 Uniprot:P48002
Length = 383
Score = 862 (308.5 bits), Expect = 1.6e-93, Sum P(3) = 1.6e-93
Identities = 166/231 (71%), Positives = 189/231 (81%)
Query: 164 GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKY 223
G G +W++A YKA IL HP+YEQLL+AHVACLR+ATPVDQ+PRIDAQL+Q V +KY
Sbjct: 106 GVVGGEDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKY 165
Query: 224 SALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
S LG +V D+KELD FM+HYV+LLCSFKEQLQ HV VHAMEA+ ACWEIEQSLQSLT
Sbjct: 166 STLG----VVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLT 221
Query: 284 GVSPGEGTGATMSXXXXXXXXXX-ANLFDGSLEGPDT-MGFGPLIPTESERSLMERVRQE 341
GVSP E G TMS N+FDGSL+G D MGFGPL+PTE ERSLMERV++E
Sbjct: 222 GVSPSESNGKTMSDDEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKE 281
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LKHELKQG+KEKIVDIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPT
Sbjct: 282 LKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
Score = 60 (26.2 bits), Expect = 1.6e-93, Sum P(3) = 1.6e-93
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 1 MAFHHNHL---SQDLPLHHFTD 19
M+F+ +HL +DLPL HFTD
Sbjct: 1 MSFNSSHLLPPQEDLPLRHFTD 22
Score = 42 (19.8 bits), Expect = 1.6e-93, Sum P(3) = 1.6e-93
Identities = 20/81 (24%), Positives = 28/81 (34%)
Query: 67 HFSDT------NFLNLRXXXXXXXXXXX--XXXXXXXXXQTPNQWLS-RTSSSLLHRNHS 117
HFS+T +FLNL T +WLS + S
Sbjct: 32 HFSETPSLVTASFLNLPTTLTTADSDLAPPHRNGDNSVADTNPRWLSFHSEMQNTGEVRS 91
Query: 118 DVIDDVTPANDSIIAAVESAD 138
+VID V ++I+ V D
Sbjct: 92 EVIDGVNADGETILGVVGGED 112
>TAIR|locus:2015554 [details] [associations]
symbol:KNAT7 "KNOTTED-like homeobox of Arabidopsis
thaliana 7" species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010089 "xylem
development" evidence=RCA;IMP] [GO:2000652 "regulation of secondary
cell wall biogenesis" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0007155 "cell adhesion" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045010 "actin nucleation"
evidence=RCA] [GO:0045492 "xylan biosynthetic process"
evidence=RCA] [GO:0048513 "organ development" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR001356 InterPro:IPR005539 InterPro:IPR005540
InterPro:IPR005541 InterPro:IPR008422 InterPro:IPR009057
Pfam:PF03789 Pfam:PF03790 Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027
PROSITE:PS50071 PROSITE:PS51213 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045892 EMBL:AC011000
GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0010089 HSSP:P55347 HOGENOM:HOG000272741 EMBL:AF308451
EMBL:AK118326 EMBL:BT026059 EMBL:AY084398 IPI:IPI00520539
PIR:A96655 RefSeq:NP_564805.1 UniGene:At.70104
ProteinModelPortal:Q9FPQ8 SMR:Q9FPQ8 IntAct:Q9FPQ8 STRING:Q9FPQ8
EnsemblPlants:AT1G62990.1 GeneID:842602 KEGG:ath:AT1G62990
GeneFarm:4000 TAIR:At1g62990 eggNOG:NOG273107 InParanoid:Q9FPQ8
OMA:HLPLIDA PhylomeDB:Q9FPQ8 ProtClustDB:CLSN2689003
Genevestigator:Q9FPQ8 GO:GO:2000652 Uniprot:Q9FPQ8
Length = 291
Score = 739 (265.2 bits), Expect = 3.6e-73, P = 3.6e-73
Identities = 148/234 (63%), Positives = 176/234 (75%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG VV QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 14 GGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 73
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 74 RSYASTAVGYH--HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 131
Query: 281 SLTGVSPGEGTGATMSXXXXXXXXXXANLFDGS--LEGPDTMGFGPLIPTESERSLMERV 338
SLTG + GEG+GATMS ++ G G D GFGPL+PTESERSLMERV
Sbjct: 132 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFSGGHDMTGFGPLLPTESERSLMERV 191
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 192 RQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>TAIR|locus:2027089 [details] [associations]
symbol:STM "SHOOT MERISTEMLESS" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0019827 "stem cell maintenance" evidence=TAS] [GO:0009934
"regulation of meristem structural organization" evidence=IMP]
[GO:0009691 "cytokinin biosynthetic process" evidence=TAS]
[GO:0048440 "carpel development" evidence=RCA;IMP] [GO:0007389
"pattern specification process" evidence=RCA] [GO:0009855
"determination of bilateral symmetry" evidence=RCA] [GO:0009886
"post-embryonic morphogenesis" evidence=RCA] [GO:0009887 "organ
morphogenesis" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010051 "xylem and phloem pattern
formation" evidence=RCA] [GO:0010093 "specification of floral organ
identity" evidence=RCA] [GO:0048438 "floral whorl development"
evidence=RCA] [GO:0048439 "flower morphogenesis" evidence=RCA]
[GO:0048481 "ovule development" evidence=RCA] [GO:0048507 "meristem
development" evidence=RCA] [GO:0048513 "organ development"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 EMBL:AC003113 GO:GO:0048440
GO:GO:0019827 GO:GO:0009934 GO:GO:0009691 HOGENOM:HOG000272741
EMBL:U32344 EMBL:AY080857 IPI:IPI00524301 PIR:S68456 PIR:T01446
RefSeq:NP_176426.1 UniGene:At.10801 ProteinModelPortal:Q38874
SMR:Q38874 IntAct:Q38874 STRING:Q38874 EnsemblPlants:AT1G62360.1
GeneID:842534 KEGG:ath:AT1G62360 GeneFarm:3999 TAIR:At1g62360
eggNOG:NOG298346 InParanoid:Q38874 OMA:DHISSTM PhylomeDB:Q38874
ProtClustDB:CLSN2682091 ArrayExpress:Q38874 Genevestigator:Q38874
GermOnline:AT1G62360 Uniprot:Q38874
Length = 382
Score = 135 (52.6 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 35/120 (29%), Positives = 65/120 (54%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGL 232
+A KA+I++HP Y +LL+A+V C ++ P P + A+L ++ + +A G
Sbjct: 118 SASVKAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGC 173
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTG 292
+ +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP +G
Sbjct: 174 LGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSG 229
Score = 130 (50.8 bits), Expect = 1.2e-15, Sum P(2) = 1.2e-15
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 261 RELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>TAIR|locus:2128828 [details] [associations]
symbol:KNAT1 "KNOTTED-like from Arabidopsis thaliana"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045165 "cell fate commitment"
evidence=IMP] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA;IMP] [GO:0007389 "pattern specification process"
evidence=RCA] [GO:0009855 "determination of bilateral symmetry"
evidence=RCA] [GO:0009887 "organ morphogenesis" evidence=RCA]
[GO:0009944 "polarity specification of adaxial/abaxial axis"
evidence=RCA] [GO:0010014 "meristem initiation" evidence=RCA]
[GO:0048438 "floral whorl development" evidence=RCA] [GO:0048439
"flower morphogenesis" evidence=RCA] [GO:0048513 "organ
development" evidence=RCA] [GO:0048519 "negative regulation of
biological process" evidence=RCA] [GO:0001708 "cell fate
specification" evidence=IMP] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0043565 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0010051 EMBL:AL161510
EMBL:U14174 EMBL:AF482994 EMBL:AF482995 EMBL:AC006267 EMBL:AY080834
EMBL:AY113982 IPI:IPI00527947 PIR:D85080 RefSeq:NP_192555.1
UniGene:At.28060 UniGene:At.72028 ProteinModelPortal:P46639
SMR:P46639 IntAct:P46639 STRING:P46639 EnsemblPlants:AT4G08150.1
GeneID:826364 KEGG:ath:AT4G08150 GeneFarm:4017 TAIR:At4g08150
eggNOG:NOG322286 HOGENOM:HOG000272741 InParanoid:P46639 OMA:FMADGMY
PhylomeDB:P46639 ProtClustDB:CLSN2685959 Genevestigator:P46639
GermOnline:AT4G08150 Uniprot:P46639
Length = 398
Score = 131 (51.2 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ELK+ L + Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 278 RELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 332
Score = 124 (48.7 bits), Expect = 1.6e-14, Sum P(2) = 1.6e-14
Identities = 35/106 (33%), Positives = 53/106 (50%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I P D + RI A Q ++ + D
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAA---RQDFEARQQRSTPSVSASSRD 191
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 282
ELDQFM Y +L ++E+L + ++ AME + IE L L
Sbjct: 192 PELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQLSML 233
>TAIR|locus:2026810 [details] [associations]
symbol:KNAT2 "KNOTTED-like from Arabidopsis thaliana 2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM;IEA;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0010094
"specification of carpel identity" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0009723 "response to ethylene
stimulus" evidence=IGI] [GO:0009736 "cytokinin mediated signaling
pathway" evidence=IMP] [GO:0007059 "chromosome segregation"
evidence=RCA] [GO:0007062 "sister chromatid cohesion" evidence=RCA]
[GO:0007129 "synapsis" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0007389 "pattern
specification process" evidence=RCA] [GO:0009062 "fatty acid
catabolic process" evidence=RCA] [GO:0009855 "determination of
bilateral symmetry" evidence=RCA] [GO:0009887 "organ morphogenesis"
evidence=RCA] [GO:0010051 "xylem and phloem pattern formation"
evidence=RCA] [GO:0010332 "response to gamma radiation"
evidence=RCA] [GO:0032204 "regulation of telomere maintenance"
evidence=RCA] [GO:0032504 "multicellular organism reproduction"
evidence=RCA] [GO:0042138 "meiotic DNA double-strand break
formation" evidence=RCA] [GO:0043247 "telomere maintenance in
response to DNA damage" evidence=RCA] [GO:0045132 "meiotic
chromosome segregation" evidence=RCA] [GO:0048438 "floral whorl
development" evidence=RCA] [GO:0048439 "flower morphogenesis"
evidence=RCA] [GO:0048519 "negative regulation of biological
process" evidence=RCA] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0009723 GO:GO:0043565
GO:GO:0003700 EMBL:AC010796 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009736 HOGENOM:HOG000272741 EMBL:U14175 EMBL:X81353
EMBL:X81354 IPI:IPI00542097 PIR:S57818 RefSeq:NP_177208.2
UniGene:At.21162 ProteinModelPortal:P46640 SMR:P46640 IntAct:P46640
STRING:P46640 EnsemblPlants:AT1G70510.1 GeneID:843388
KEGG:ath:AT1G70510 GeneFarm:4001 TAIR:At1g70510 eggNOG:NOG270511
InParanoid:P46640 OMA:MEIACIL PhylomeDB:P46640
ProtClustDB:CLSN2680790 Genevestigator:P46640 GermOnline:AT1G70510
GO:GO:0010094 Uniprot:P46640
Length = 310
Score = 124 (48.7 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 20/53 (37%), Positives = 32/53 (60%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++LK +L + + I ++ E +K++ GKLP + L WW H+KWPYPT
Sbjct: 207 RDLKDQLLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
Score = 115 (45.5 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 40/127 (31%), Positives = 62/127 (48%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHV----VSKYSA 225
N+ + K++I SHPLY +LL ++ C ++ P++ + I ++ + HV V+ S
Sbjct: 63 NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPME-IACILEEIQRENHVYKRDVAPLSC 121
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TG 284
GA D ELD+FM Y +L +K L + EA +IE LQ+L TG
Sbjct: 122 FGA-------DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCTG 170
Query: 285 VSPGEGT 291
P T
Sbjct: 171 --PASAT 175
>UNIPROTKB|P46609 [details] [associations]
symbol:OSH1 "Homeobox protein knotted-1-like 6"
species:39947 "Oryza sativa Japonica Group" [GO:0003677 "DNA
binding" evidence=IMP] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IMP] [GO:0005634
"nucleus" evidence=IGI] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IGI] InterPro:IPR001356 InterPro:IPR005539
InterPro:IPR005540 InterPro:IPR005541 InterPro:IPR008422
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF03789 Pfam:PF03790
Pfam:PF03791 Pfam:PF05920 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51213 SMART:SM00389 GO:GO:0005634 GO:GO:0003677
GO:GO:0043565 GO:GO:0003700 GO:GO:0006351 EMBL:DP000009
EMBL:AP008209 Gene3D:1.10.10.60 SUPFAM:SSF46689 eggNOG:NOG322286
HOGENOM:HOG000272741 EMBL:D16507 EMBL:AC145380
RefSeq:NP_001051139.2 UniGene:Os.151 ProteinModelPortal:P46609
EnsemblPlants:LOC_Os03g51690.1 EnsemblPlants:LOC_Os03g51690.2
GeneID:4333973 KEGG:osa:4333973 Gramene:P46609 OMA:DGHFIND
Uniprot:P46609
Length = 361
Score = 150 (57.9 bits), Expect = 5.4e-08, P = 5.4e-08
Identities = 34/86 (39%), Positives = 46/86 (53%)
Query: 309 LFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAG 368
L GS E D G G TE V QELKH L + Y + +++E+ +K++ G
Sbjct: 213 LSSGSSE-EDQEGSGG--ETELPEIDAHGVDQELKHHLLKKYSGYLSSLKQELSKKKKKG 269
Query: 369 KLPGDTTSVLKSWWQSHSKWPYPTVS 394
KLP D L +WW+ H KWPYP+ S
Sbjct: 270 KLPKDARQQLLNWWELHYKWPYPSES 295
Score = 140 (54.3 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 56/191 (29%), Positives = 95/191 (49%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G T+
Sbjct: 105 KAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTA-VAQDLELRQR-TALGV-LGAATEP 161
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ AME + +E L +L+ +S G +S
Sbjct: 162 -ELDQFMEAYHEMLVKYREELTRPLQ-EAMEFLR---RVETQLNTLS-IS-GRSLRNILS 214
Query: 297 XXXXXXXXXXANLFDGSLEGPDTMGFGPLIPTESERSLMERVR---QELKHEL-KQGYKE 352
+ G E P+ G + E + L+++ LK EL K+ K
Sbjct: 215 SGSSEEDQEGSG---GETELPEIDAHG--VDQELKHHLLKKYSGYLSSLKQELSKKKKKG 269
Query: 353 KIV-DIREEIL 362
K+ D R+++L
Sbjct: 270 KLPKDARQQLL 280
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.131 0.391 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 418 326 0.00087 116 3 11 22 0.40 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 8
No. of states in DFA: 615 (65 KB)
Total size of DFA: 239 KB (2129 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 26.96u 0.08s 27.04t Elapsed: 00:00:01
Total cpu time: 26.96u 0.08s 27.04t Elapsed: 00:00:01
Start: Mon May 20 18:14:27 2013 End: Mon May 20 18:14:28 2013