BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014791
(418 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356507510|ref|XP_003522507.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 411
Score = 513 bits (1322), Expect = e-143, Method: Compositional matrix adjust.
Identities = 274/418 (65%), Positives = 305/418 (72%), Gaps = 80/418 (19%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQ---------QPPSPPQQQHHQHQQSIETTAPNWL 51
MA+HHN Q+LPLHHFTDQQQ Q P S P HQ APNWL
Sbjct: 1 MAYHHN--PQELPLHHFTDQQQHHNQPLVDNSLLSDPASKPASDPHQ-------PAPNWL 51
Query: 52 NSALLRSQQAQQQAAHFSDTN-----------------FLNLRTTANNNNSNNNNTASDS 94
N+ALLR+ H++D N FLNL T+ SDS
Sbjct: 52 NNALLRT--------HYTDNNNNNNVNAANNNTNNGTNFLNLHTST-----------SDS 92
Query: 95 DASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNN 154
QWL+R +L+RNHS+VIDDVT A DS +AA ES DLK
Sbjct: 93 ------GQWLAR---PILNRNHSEVIDDVTGAGDSNMAAAESGDLK-------------- 129
Query: 155 KSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 214
+ VE G+DG++NWQNAR KAEIL+HPLYEQLLSAHVACLRIATPVDQLPRIDAQL
Sbjct: 130 -GDAAAVEGGSDGLMNWQNARLKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLT 188
Query: 215 QSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 274
QSQ+VV+KYSA G Q +V DDKELDQF++HYVLLLCSFKEQLQQHVRVHAMEAVMACWE
Sbjct: 189 QSQNVVAKYSAFG--QAIVGDDKELDQFLSHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 246
Query: 275 IEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSL 334
IEQSLQSLTGVSPGEGTGATMSD++++QVDSDANLFDG+L+GPD+MGFGPLIPTE+ERSL
Sbjct: 247 IEQSLQSLTGVSPGEGTGATMSDEEDEQVDSDANLFDGALDGPDSMGFGPLIPTENERSL 306
Query: 335 MERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
MERVR ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 307 MERVRHELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 364
>gi|449455557|ref|XP_004145519.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
gi|449485171|ref|XP_004157089.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 455
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 298/433 (68%), Positives = 323/433 (74%), Gaps = 65/433 (15%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQ--------------QQP-----PSPPQQQHHQHQQ 41
MA+H NHLSQDLPLH F+D Q Q Q P P P QQ H H
Sbjct: 1 MAYH-NHLSQDLPLH-FSDHHHQNQPLSDSSSLRNILPDQLPAGHTSPDPKSQQPHHHHH 58
Query: 42 SIET--TAPNWLNSALLRSQQAQQQAAHFSDTN----------FLNLRTTANNNNSNNNN 89
TAPNWLN+ALLR+Q +HFS FLNL TTA
Sbjct: 59 HQHPLQTAPNWLNNALLRNQNPH---SHFSTDTATTAAAANTNFLNLHTTA--------- 106
Query: 90 TASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAV------ESADLKNAN 143
SDS S + NQWLSR +LHRNHSDVIDDV A D++I A +S DLKN
Sbjct: 107 --SDSTVSHSSNQWLSRP---ILHRNHSDVIDDVA-AGDAMIGAATAALSHDSGDLKN-- 158
Query: 144 SENMNNASTNNKSEGVVVESGA--DGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIAT 201
+ N+ NKSEG+V+E GA +GV+NWQ+ARYKAEIL+HPLYEQLLSAHVACLRIAT
Sbjct: 159 --DANSGDGLNKSEGMVMEPGAGGEGVLNWQHARYKAEILAHPLYEQLLSAHVACLRIAT 216
Query: 202 PVDQLPRIDAQLAQSQHVVSKYSALG--AGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQ 259
PVDQLPRIDAQLAQSQ+VV+KYSALG A +V DDKELDQFMTHYVLLLCSFKEQLQQ
Sbjct: 217 PVDQLPRIDAQLAQSQNVVAKYSALGHSAPPSMVGDDKELDQFMTHYVLLLCSFKEQLQQ 276
Query: 260 HVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDT 319
HVRVHAMEAVMACW+IEQSLQSLTGVSPGEGTGATMSDDD+DQVDSDAN+FDGSL+GPDT
Sbjct: 277 HVRVHAMEAVMACWDIEQSLQSLTGVSPGEGTGATMSDDDDDQVDSDANVFDGSLDGPDT 336
Query: 320 MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK 379
MGFGPLIPTESERSLMERVRQELKHELK GYKEKIVDIREEILRKRRAGKLPGDTTSVLK
Sbjct: 337 MGFGPLIPTESERSLMERVRQELKHELKSGYKEKIVDIREEILRKRRAGKLPGDTTSVLK 396
Query: 380 SWWQSHSKWPYPT 392
WWQSHSKWPYPT
Sbjct: 397 QWWQSHSKWPYPT 409
>gi|312282373|dbj|BAJ34052.1| unnamed protein product [Thellungiella halophila]
Length = 434
Score = 508 bits (1307), Expect = e-141, Method: Compositional matrix adjust.
Identities = 279/409 (68%), Positives = 306/409 (74%), Gaps = 50/409 (12%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q PP Q Q Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQHQPPPPPPPP---PQQQQQQHFQEAAPPNWLNTALLRS-- 55
Query: 61 AQQQAAHFSDTNFLNL-RTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNH--- 116
D NFLNL TAN + +++ + S A+ NQWLSR+SSS L R
Sbjct: 56 ---------DNNFLNLHTATANTTAAASSSDSPSSAAAAAANQWLSRSSSSFLQRTGSNN 106
Query: 117 -------------SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVES 163
DVIDDVT + +I E +K+ +S+N A+
Sbjct: 107 NNNAAAASGAAVVGDVIDDVTGGAEPMIGGGE---MKSGDSKNDGGAA------------ 151
Query: 164 GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKY 223
A+GVV+WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KY
Sbjct: 152 -AEGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKY 210
Query: 224 SALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
SALGAGQGLV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT
Sbjct: 211 SALGAGQGLVADDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 270
Query: 284 GVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
GVSPGEG GATMSDD+++QV+SDAN+FDG L D +GFGPLIPTESERSLMERVRQELK
Sbjct: 271 GVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELK 327
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 328 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 376
>gi|15238743|ref|NP_197904.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
gi|1346387|sp|P48000.1|KNAT3_ARATH RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=Protein KNAT3
gi|1045042|emb|CAA63130.1| KNAT3 homeobox protein [Arabidopsis thaliana]
gi|4063731|gb|AAC98441.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
gi|332006030|gb|AED93413.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
Length = 431
Score = 504 bits (1298), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/401 (70%), Positives = 310/401 (77%), Gaps = 37/401 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q QPP PP QQ Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQHQPPPPQPPPPPPQQQQHFQ---EAPPPNWLNTALLRSSD 57
Query: 61 AQQQAAHFSDTNFLNL-RTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNH--- 116
++ NFLNL TAN ++++++ S + A+ NQWLSR SSS L RN+
Sbjct: 58 --------NNNNFLNLHTATANTTTASSSDSPSSAAAAAAANQWLSR-SSSFLQRNNNNN 108
Query: 117 ----SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ 172
D IDDVT D++I ++K EN N+ + ADGVV+WQ
Sbjct: 109 ASIVGDGIDDVTGGADTMI----QGEMKTGGGENKNDGGG---------ATAADGVVSWQ 155
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QG 231
NAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSALGA QG
Sbjct: 156 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG 215
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
LV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG
Sbjct: 216 LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGM 275
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QV+SDAN+FDG L D +GFGPLIPTESERSLMERVRQELKHELKQGYK
Sbjct: 276 GATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQGYK 332
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 333 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>gi|79328660|ref|NP_001031938.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
gi|332006031|gb|AED93414.1| homeobox protein knotted-1-like 3 [Arabidopsis thaliana]
Length = 419
Score = 503 bits (1296), Expect = e-140, Method: Compositional matrix adjust.
Identities = 281/401 (70%), Positives = 310/401 (77%), Gaps = 37/401 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q QPP PP QQ Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQHQPPPPQPPPPPPQQQQHFQ---EAPPPNWLNTALLRSSD 57
Query: 61 AQQQAAHFSDTNFLNL-RTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNH--- 116
++ NFLNL TAN ++++++ S + A+ NQWLSR SSS L RN+
Sbjct: 58 --------NNNNFLNLHTATANTTTASSSDSPSSAAAAAAANQWLSR-SSSFLQRNNNNN 108
Query: 117 ----SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ 172
D IDDVT D++I ++K EN N+ + ADGVV+WQ
Sbjct: 109 ASIVGDGIDDVTGGADTMI----QGEMKTGGGENKNDGGG---------ATAADGVVSWQ 155
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QG 231
NAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSALGA QG
Sbjct: 156 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG 215
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
LV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG
Sbjct: 216 LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGM 275
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QV+SDAN+FDG L D +GFGPLIPTESERSLMERVRQELKHELKQGYK
Sbjct: 276 GATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQGYK 332
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 333 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>gi|111038269|gb|ABH03531.1| class II knotted-like homeobox protein [Prunus persica]
gi|215983122|gb|ACJ71731.1| class II knotted-like homeobox transcription factor [Prunus
persica]
Length = 448
Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust.
Identities = 293/418 (70%), Positives = 318/418 (76%), Gaps = 54/418 (12%)
Query: 1 MAFHHNHLSQ-DLPLHHFTDQQQQQ-------QQQPPSPPQQQHHQHQQSIETTAPNWLN 52
MA+H NHLSQ DLPLHHFTDQ QQQ Q P S P + HH Q APNWLN
Sbjct: 1 MAYH-NHLSQQDLPLHHFTDQTQQQHQPFQSDQHDPNSKPTEPHHPFQ-----PAPNWLN 54
Query: 53 SALLRS----------QQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQ 102
+ALLR+ + +NFLNL TA SDS SQ NQ
Sbjct: 55 TALLRNYTNADANNNHNNSPNNNGGGGASNFLNLHVTA-----------SDSTTSQASNQ 103
Query: 103 WLSRTSSSLLHRNHSDVIDDVTP-ANDSIIAAV---ESADLKNANSENMNNASTNNKSEG 158
WLS+ +LHRNHSDVIDDVT A DS+IAA +SADLK +S N +
Sbjct: 104 WLSQPHRPILHRNHSDVIDDVTAIAGDSMIAATISHDSADLKPDSSLNKTD--------- 154
Query: 159 VVVESGADG----VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 214
+VVESG G ++NWQNAR+KAEIL+HPLYE LLSAHVACLRIATPVDQLPRIDAQLA
Sbjct: 155 IVVESGGGGGDGGMINWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLA 214
Query: 215 QSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 274
QSQ+VV+KYSALG G+V DDKELDQFM HYVLLLCSFKEQLQQHVRVHAMEAVMACWE
Sbjct: 215 QSQNVVAKYSALG--HGMVGDDKELDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 272
Query: 275 IEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSL 334
IEQSLQSLTGVSPGEGTGATMSDD++DQVDSDANLFDGS+EG D+MGFGPLIPTESERSL
Sbjct: 273 IEQSLQSLTGVSPGEGTGATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSL 332
Query: 335 MERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
MERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 333 MERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 390
>gi|210160856|gb|ACJ09316.1| KNAT3-like transcription factor [Juglans nigra]
Length = 482
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 300/439 (68%), Positives = 328/439 (74%), Gaps = 61/439 (13%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPP--------------------------QQ 34
MA+H N LSQDLPL HF DQ +Q++ Q P
Sbjct: 1 MAYH-NQLSQDLPLQHFADQSRQREAQNQGLPDNSALRTILPDQLATHSSPSDPSSKPGS 59
Query: 35 QHHQHQQSIETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSN------NN 88
HH H Q TAPNWLNSALLR+Q A ++DT+ ANNNN+ N
Sbjct: 60 NHHHHLQ----TAPNWLNSALLRTQ------AQYNDTSNTTAAGAANNNNNTNSTNFLNL 109
Query: 89 NTASDSDA-SQTPNQWLSRTSSSLLHRNHSDVIDDVT--PANDSIIAAVESAD----LKN 141
+TASDS A SQ+ NQWLSR +LHRNHS+VIDDV A D +IAA S D LKN
Sbjct: 110 HTASDSTAASQSSNQWLSR---PILHRNHSEVIDDVASAAAGDPMIAATMSHDSAENLKN 166
Query: 142 AN-SENMNNASTN-NKSEGVVVESG-----ADGVVNWQNARYKAEILSHPLYEQLLSAHV 194
+ S+N+N S N NKSEG V ADGV+NWQNARYKAEILSHPLYEQLLSAHV
Sbjct: 167 NDGSDNLNITSGNPNKSEGGVGVGVVVESGADGVMNWQNARYKAEILSHPLYEQLLSAHV 226
Query: 195 ACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTDDKELDQFMTHYVLLLCSF 253
CLRIATPVDQLPRIDAQLAQS++VV+KYSALG A +V DDKELDQF+THYVLLLCSF
Sbjct: 227 TCLRIATPVDQLPRIDAQLAQSENVVAKYSALGHATPSMVGDDKELDQFLTHYVLLLCSF 286
Query: 254 KEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGS 313
KEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD++QVDSDANLFDG
Sbjct: 287 KEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDDEQVDSDANLFDGG 346
Query: 314 LEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGD 373
LEGPD+MGFGPLIPTE+ERSLMERVRQELKHELK GYKEKIVDIREEILRKRRAGKLPGD
Sbjct: 347 LEGPDSMGFGPLIPTETERSLMERVRQELKHELKLGYKEKIVDIREEILRKRRAGKLPGD 406
Query: 374 TTSVLKSWWQSHSKWPYPT 392
TTSVLK+WWQSHSKWPYPT
Sbjct: 407 TTSVLKAWWQSHSKWPYPT 425
>gi|21554222|gb|AAM63298.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 431
Score = 501 bits (1291), Expect = e-139, Method: Compositional matrix adjust.
Identities = 280/401 (69%), Positives = 309/401 (77%), Gaps = 37/401 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q QPP PP QQ Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQHQPPPPQPPPPPPQQQQHFQ---EAPPPNWLNTALLRSSD 57
Query: 61 AQQQAAHFSDTNFLNL-RTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNH--- 116
++ NFLNL TAN ++++++ S + A+ NQWLS SSS L RN+
Sbjct: 58 --------NNNNFLNLHTATANTTTASSSDSPSSAAAAAAANQWLS-LSSSFLQRNNNNN 108
Query: 117 ----SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ 172
D IDDVT D++I ++K EN N+ + ADGVV+WQ
Sbjct: 109 ASIVGDGIDDVTGGADTMI----QGEMKTGGGENKNDGGG---------ATAADGVVSWQ 155
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QG 231
NAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSALGA QG
Sbjct: 156 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG 215
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
LV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG
Sbjct: 216 LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGM 275
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QV+SDAN+FDG L D +GFGPLIPTESERSLMERVRQELKHELKQGYK
Sbjct: 276 GATMSDDEDEQVESDANMFDGGL---DVLGFGPLIPTESERSLMERVRQELKHELKQGYK 332
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 333 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 373
>gi|302398821|gb|ADL36705.1| HD domain class transcription factor [Malus x domestica]
Length = 437
Score = 500 bits (1288), Expect = e-139, Method: Compositional matrix adjust.
Identities = 298/418 (71%), Positives = 321/418 (76%), Gaps = 53/418 (12%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQ-------PPSPPQQQHHQHQQSIETTAPNWLNS 53
MA+H NHLSQDLPLHHFTDQ QQQ QQ P S P + HH Q APNWLNS
Sbjct: 1 MAYH-NHLSQDLPLHHFTDQTQQQHQQYQSDQTDPTSKPPEPHHPFQ-----PAPNWLNS 54
Query: 54 ALLR---------SQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWL 104
ALLR + +NFLNL TA SDS ASQ NQWL
Sbjct: 55 ALLRNFTNADTNPTNSNNANNNGGGASNFLNLHVTA-----------SDSAASQASNQWL 103
Query: 105 SRTSSSLLHRNHSDVIDDVTPANDSIIAAV--ESADLKNANSENMNNASTNNKSEGVVVE 162
S++ +LHRNHSDVIDDVT A DS+IAA+ +SADLK S NKSEG VVE
Sbjct: 104 SQSHRPILHRNHSDVIDDVTVAGDSMIAAMSHDSADLKPD--------SNLNKSEGGVVE 155
Query: 163 SGADG--------VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 214
SG G V+NWQNAR+KAEIL+HPLYE LLSAHVACLRIATPVDQLPRIDAQLA
Sbjct: 156 SGIPGGGGGGDGGVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLA 215
Query: 215 QSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 274
SQ+VV+KYSALG G+V DDKELDQFM HYVLLLCSFKEQLQQHVRVHAMEAVMACWE
Sbjct: 216 XSQNVVAKYSALG--NGMVGDDKELDQFMRHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 273
Query: 275 IEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSL 334
IEQSLQSLTGVSPGEGTGATMSDD++DQVDSDANLFDGS+EG D+MGFGPLIPTESERSL
Sbjct: 274 IEQSLQSLTGVSPGEGTGATMSDDEDDQVDSDANLFDGSMEGHDSMGFGPLIPTESERSL 333
Query: 335 MERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
MERVRQELKHELKQGYKEKIVDIREEI+RKRRAGKLPG+TTSVLK+WWQSHSKWPYPT
Sbjct: 334 MERVRQELKHELKQGYKEKIVDIREEIMRKRRAGKLPGNTTSVLKAWWQSHSKWPYPT 391
>gi|336112103|gb|AEI17370.1| knox-like protein 3 [Arabidopsis lyrata]
Length = 441
Score = 497 bits (1280), Expect = e-138, Method: Compositional matrix adjust.
Identities = 279/401 (69%), Positives = 308/401 (76%), Gaps = 39/401 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q QPP PP QQ Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQYQPPPPQPPPPPPQQQQHFQ---EAPPPNWLNTALLRSS- 56
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
+ NFLNL T N + +++ + S A+ NQWLSR SSS L RN++
Sbjct: 57 --------VNNNFLNLHTATANTTTASSSDSPSSAAAAA-NQWLSR-SSSFLQRNNNATA 106
Query: 118 -----DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ 172
D IDDVT +++I D+K+ EN N+ ++GVV +WQ
Sbjct: 107 STVVGDGIDDVTGGAETMI----QGDMKSGGGENKNDGGGAAAADGVV---------SWQ 153
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QG 231
NAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSALGA QG
Sbjct: 154 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG 213
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
LV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG
Sbjct: 214 LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGM 273
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QV+SDANLFDGSL D +GFGPL+PTESERSLMERVRQELKHELKQGYK
Sbjct: 274 GATMSDDEDEQVESDANLFDGSL---DVLGFGPLVPTESERSLMERVRQELKHELKQGYK 330
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 331 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 371
>gi|224143241|ref|XP_002324890.1| predicted protein [Populus trichocarpa]
gi|222866324|gb|EEF03455.1| predicted protein [Populus trichocarpa]
Length = 426
Score = 496 bits (1276), Expect = e-137, Method: Compositional matrix adjust.
Identities = 288/397 (72%), Positives = 314/397 (79%), Gaps = 34/397 (8%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MA+HHN SQDLPLHHFTDQQ + P PNWLN+ALLRSQQ
Sbjct: 1 MAYHHNLSSQDLPLHHFTDQQATENHTAP------------------PNWLNTALLRSQQ 42
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDA-SQTPNQWLSRTSSSLLHRNHSDV 119
QQ H T+ N N + + TA+ SD+ S P QWLSR+SSSLL+RNHSDV
Sbjct: 43 PPQQQTHHHFTDNNNTNNFLNLHTATTTATATTSDSNSHNPVQWLSRSSSSLLNRNHSDV 102
Query: 120 IDDVTPAND-SIIAAV--ESADLKNANSENMNNASTNNKSEGVVVESGA-DGVVNWQNAR 175
IDDV D +II ++ ES++LKN N K EG ++SG + VVNWQNAR
Sbjct: 103 IDDVAAGGDHAIITSISQESSELKNMN-----------KGEGEAMDSGGGESVVNWQNAR 151
Query: 176 YKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD 235
YKA+IL+HPLY+QLLSAHVACLRIATPVDQLPRIDAQLAQSQ VV+KYSALG+ QGLV D
Sbjct: 152 YKADILTHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQQVVTKYSALGSHQGLVPD 211
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
DKELDQFMTHY LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM
Sbjct: 212 DKELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 271
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
SDDDEDQVDSDANLF GSLEG DT+GFGPL+PTESERSLMERVRQELKHELKQGYKEKIV
Sbjct: 272 SDDDEDQVDSDANLFVGSLEGADTLGFGPLVPTESERSLMERVRQELKHELKQGYKEKIV 331
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
DIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 332 DIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 368
>gi|297808523|ref|XP_002872145.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
lyrata]
gi|297317982|gb|EFH48404.1| hypothetical protein ARALYDRAFT_489374 [Arabidopsis lyrata subsp.
lyrata]
Length = 429
Score = 495 bits (1274), Expect = e-137, Method: Compositional matrix adjust.
Identities = 279/401 (69%), Positives = 307/401 (76%), Gaps = 39/401 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNHLSQDL +HFTDQ Q QPP PP QQ Q E PNWLN+ALLRS
Sbjct: 1 MAFHHNHLSQDLSFNHFTDQHQPPPPQPPPPPPQQQQHFQ---EAPPPNWLNTALLRSS- 56
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNH---- 116
+ NFLNL T N + +++ + S A+ NQWLSR SSS L RN+
Sbjct: 57 --------VNNNFLNLHTATANTTTASSSDSPSSAAAAA-NQWLSR-SSSFLQRNNNATA 106
Query: 117 ----SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ 172
D IDDVT +++I D+K+ EN N+ ++GVV +WQ
Sbjct: 107 STVVGDGIDDVTGGAETMI----QGDMKSGGGENKNDGGGAAAADGVV---------SWQ 153
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG-QG 231
NAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSALGA QG
Sbjct: 154 NARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSALGAAAQG 213
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
LV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG
Sbjct: 214 LVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGM 273
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QV+SDANLFDGSL D +GFGPL+PTESERSLMERVRQELKHELKQGYK
Sbjct: 274 GATMSDDEDEQVESDANLFDGSL---DVLGFGPLVPTESERSLMERVRQELKHELKQGYK 330
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 331 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 371
>gi|132424655|gb|ABO33480.1| class II KNOX homeobox transcription factor [Medicago truncatula]
Length = 439
Score = 488 bits (1256), Expect = e-135, Method: Compositional matrix adjust.
Identities = 258/402 (64%), Positives = 298/402 (74%), Gaps = 22/402 (5%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQ------PPSP-PQQQHHQHQQSIETTAPNWLNS 53
MA+ + HLSQ+LP+ HFTDQ P SP P + + T PNWLN+
Sbjct: 1 MAYQNQHLSQELPIQHFTDQTNNNNNNSFRSILPDSPDPNSKPDSDPNNQLQTTPNWLNN 60
Query: 54 ALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNN--NTASDSDASQTPNQWLSRTSSSL 111
A+LR+ + ++ + N ++ N +N N SD QT QWL+R S+
Sbjct: 61 AILRTHYTDNNNNNNNNDDVTNNVNNDSDGNGASNFLNLQQTSDTVQTTGQWLAR---SI 117
Query: 112 LHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNW 171
LHR H +VID+VT A++ E A++KN + ++ KSE VV G G+VNW
Sbjct: 118 LHRQHGEVIDNVTMASE---VEHELANMKN----DGDSDGLGGKSEVAVVGDG--GLVNW 168
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
Q R+KAEI++HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYSA G G
Sbjct: 169 QMGRWKAEIMAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSAFGQNIG 228
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
DDKELD FM+HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT
Sbjct: 229 AGVDDKELDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 288
Query: 292 GATMSDDDEDQVDSDANLFDGSLE-GPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
GATMSDD+++QVDSDANLFDGS + G D MGFGPLIPTE+ERSLMERVRQELKHELK GY
Sbjct: 289 GATMSDDEDEQVDSDANLFDGSFDGGADNMGFGPLIPTENERSLMERVRQELKHELKHGY 348
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 349 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 390
>gi|359475858|ref|XP_002285407.2| PREDICTED: homeobox protein knotted-1-like 3-like [Vitis vinifera]
Length = 415
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 268/413 (64%), Positives = 294/413 (71%), Gaps = 65/413 (15%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQ--------------QQQPPSPPQQQHHQHQQSIETT 46
MAFH N LSQ++ L HFT+Q + Q P + +Q Q T
Sbjct: 1 MAFH-NQLSQEMALQHFTEQHLGENASVLRTILPDHLAQSSPEGAGKAPENQQQPVQLGT 59
Query: 47 APNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSR 106
P WLN A+ QQ+Q +SD NFLN
Sbjct: 60 GPTWLNHAIQLRQQSQ-----YSDNNFLN------------------------------- 83
Query: 107 TSSSLLHRNHSDVI---DDVTPANDSIIAAV---ESADLKNANSENMNNASTNNKSEGVV 160
L RN +DV+ D+V+ NDSIIA ESADL N NS N N N+ + +
Sbjct: 84 ----FLQRNTNDVVAAGDEVS--NDSIIATAMSHESADLANNNSNNSNVKVNNSGNGAEI 137
Query: 161 VESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
ESG D VNWQNAR KAEIL+HPLYEQLLS+HVACLRIATPVDQLPRIDAQLAQSQHVV
Sbjct: 138 AESG-DVAVNWQNARQKAEILAHPLYEQLLSSHVACLRIATPVDQLPRIDAQLAQSQHVV 196
Query: 221 SKYSALGAGQG-LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSL 279
SKYSALG G ++ D+KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSL
Sbjct: 197 SKYSALGHGNSQMLGDEKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSL 256
Query: 280 QSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVR 339
QSLTGVSPGEGTGATMSDD+EDQ+DSDANLFDGSLEG D+MGFGPL+PTESERSLMERVR
Sbjct: 257 QSLTGVSPGEGTGATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVR 316
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 317 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 369
>gi|356515190|ref|XP_003526284.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 400
Score = 483 bits (1244), Expect = e-134, Method: Compositional matrix adjust.
Identities = 264/410 (64%), Positives = 292/410 (71%), Gaps = 75/410 (18%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQ---------QPPSPPQQQHHQHQQSIETTAPNWL 51
MA+H+ QDLPLHHFTDQQQ P S P HQ APNWL
Sbjct: 1 MAYHN---PQDLPLHHFTDQQQHHNHTLPHNSLLSDPASKPASDPHQ-------PAPNWL 50
Query: 52 NSALLRS---------QQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQ 102
N+ALLR+ + TNFLNL T+A SDS Q
Sbjct: 51 NNALLRTDYTHTTTTTTTNTAANNSNNSTNFLNLHTSA-----------SDS------GQ 93
Query: 103 WLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVE 162
W +R +L+RNHS+VIDDV A ES DLK +
Sbjct: 94 WQAR---PILNRNHSEVIDDVAGA------GAESGDLKGETAP----------------- 127
Query: 163 SGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSK 222
DG++NWQNAR KAEIL+HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+K
Sbjct: 128 --VDGLLNWQNARLKAEILTHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAK 185
Query: 223 YSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 282
YSA G Q +V DDKELDQF++HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL
Sbjct: 186 YSAFG--QAIVGDDKELDQFLSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 243
Query: 283 TGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQEL 342
TGVSPGEGTGATMSDD+++QVDSDANLFDG+L+GPD+MGFGPLIPTE+ERSLMERVR EL
Sbjct: 244 TGVSPGEGTGATMSDDEDEQVDSDANLFDGALDGPDSMGFGPLIPTENERSLMERVRHEL 303
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KHELKQGYK+KIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 304 KHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 353
>gi|302398827|gb|ADL36708.1| HD domain class transcription factor [Malus x domestica]
Length = 427
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 287/408 (70%), Positives = 310/408 (75%), Gaps = 43/408 (10%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQ-------PPSPPQQQHHQHQQSIETTAPNWLNS 53
MA+H NHLSQDLPLHHFTDQ Q QQ P S P + HH Q APNWLNS
Sbjct: 1 MAYH-NHLSQDLPLHHFTDQTHHQHQQYQSDQPDPNSKPPEPHHSFQ-----PAPNWLNS 54
Query: 54 ALLR---------SQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWL 104
ALLR + +NFLNL TA SDS ASQ NQWL
Sbjct: 55 ALLRNFTNTDTNPTNSNNANNNGGGVSNFLNLHVTA-----------SDSAASQASNQWL 103
Query: 105 SRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESG 164
S++ +LHRNHSDVIDDVT A DS+IAA S D S ++ S NK+E G
Sbjct: 104 SQSHRPILHRNHSDVIDDVTVAGDSMIAAALSHD-----SADLKPDSILNKNE---GGGG 155
Query: 165 ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS 224
GV+NWQNAR+KAEIL+HPLYE LLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS
Sbjct: 156 DGGVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYS 215
Query: 225 ALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
ALG G+V DDKELDQFM +YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG
Sbjct: 216 ALG--NGMVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 273
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
VSPGEGT ATMSDD++DQVDSDANLFD +EG D+MGFGPLIPTESERSLMERVRQELKH
Sbjct: 274 VSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKH 333
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 334 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381
>gi|255548818|ref|XP_002515465.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223545409|gb|EEF46914.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 456
Score = 481 bits (1238), Expect = e-133, Method: Compositional matrix adjust.
Identities = 302/406 (74%), Positives = 321/406 (79%), Gaps = 40/406 (9%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHN LSQ+LPLHHF DQ QQQQQQ + Q++ + PNWLN+ALLR+QQ
Sbjct: 1 MAFHHN-LSQELPLHHFADQTQQQQQQHQNI--------QETTSASPPNWLNTALLRTQQ 51
Query: 61 AQQQA------AHFSDTN-FLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLH 113
QQQ +HF+DTN FLNL TT+ T SDS ASQ P QWLSR SSS+L+
Sbjct: 52 PQQQQPPPPHHSHFTDTNNFLNLHTTST--------TNSDSTASQNPTQWLSR-SSSILN 102
Query: 114 RNHSDVIDDVTPAND----SIIAAV---ESADLKNANSENMNNASTNNKSEGVVVESGAD 166
RNHSDV+DDVT SIIA ES DLK N+NN S E
Sbjct: 103 RNHSDVMDDVTAVAATAADSIIAGTISQESTDLKT----NINNKSEGGVVESGSGGGEG- 157
Query: 167 GVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
VVNWQNARYKAEILSHPLY+QLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV+KYSAL
Sbjct: 158 -VVNWQNARYKAEILSHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVAKYSAL 216
Query: 227 GAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 286
G QGLV DDKELDQFMTHY LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS
Sbjct: 217 G--QGLVADDKELDQFMTHYFLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 274
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
PGEGTGATMSDDD+DQVDSDANLFD SL+G DTMGFGPLIPTESERSLMERVR ELKHEL
Sbjct: 275 PGEGTGATMSDDDDDQVDSDANLFDPSLDGADTMGFGPLIPTESERSLMERVRHELKHEL 334
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KQGYKEKI DIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 335 KQGYKEKIADIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 380
>gi|3023961|sp|O04136.1|KNAP3_MALDO RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=KNAP3
gi|1946222|emb|CAA96512.1| knotted1-like homeobox protein [Malus x domestica]
Length = 427
Score = 478 bits (1231), Expect = e-132, Method: Compositional matrix adjust.
Identities = 286/408 (70%), Positives = 309/408 (75%), Gaps = 43/408 (10%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQ-------PPSPPQQQHHQHQQSIETTAPNWLNS 53
MA+H NHLSQDLPLHHFTDQ Q QQ P S P + HH Q APNWLNS
Sbjct: 1 MAYH-NHLSQDLPLHHFTDQTHHQHQQYQSDQPDPNSKPPEPHHSFQ-----PAPNWLNS 54
Query: 54 ALLR---------SQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWL 104
ALLR + +NFLNL TA SDS ASQ NQWL
Sbjct: 55 ALLRNFTNTDTNPTNSNNANNNGGGVSNFLNLHVTA-----------SDSAASQASNQWL 103
Query: 105 SRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESG 164
S++ +LHRNHSDV DDVT A DS+IAA S D S ++ S NK+E G
Sbjct: 104 SQSHRPILHRNHSDVNDDVTVAGDSMIAAALSHD-----SADLKPDSILNKNE---GGGG 155
Query: 165 ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS 224
GV+NWQNAR+KAEIL+HPLYE LLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS
Sbjct: 156 DGGVMNWQNARHKAEILAHPLYEPLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYS 215
Query: 225 ALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
ALG G+V DDKELDQFM +YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG
Sbjct: 216 ALG--NGMVGDDKELDQFMRNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 273
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
VSPGEGT ATMSDD++DQVDSDANLFD +EG D+MGFGPLIPTESERSLMERVRQELKH
Sbjct: 274 VSPGEGTSATMSDDEDDQVDSDANLFDEGMEGHDSMGFGPLIPTESERSLMERVRQELKH 333
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 334 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 381
>gi|225463014|ref|XP_002265494.1| PREDICTED: homeobox protein knotted-1-like 3 [Vitis vinifera]
Length = 430
Score = 477 bits (1227), Expect = e-132, Method: Compositional matrix adjust.
Identities = 263/414 (63%), Positives = 304/414 (73%), Gaps = 52/414 (12%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQ-----------------QQQQQQPPSPPQQQHHQHQQSI 43
MAFH N LS D+ L HFTD Q PP H Q
Sbjct: 1 MAFH-NQLSHDMALQHFTDSHLTENTAVLRGILPEQLGQSSSDGAGKPPS--HQQLGGGG 57
Query: 44 ETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQW 103
P WLN+A+LR Q + ++D +FL+L+T N+++T+S + A+ T NQW
Sbjct: 58 GGGGPTWLNNAILRQQ------SQYADGSFLHLQT-------NSDSTSSPATATTTTNQW 104
Query: 104 LSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMN-----NASTNNKSEG 158
LSR+ S++ +N DDV ++ S+IAA+ SADL N N E N N NN +
Sbjct: 105 LSRSMSNVGAQN-----DDVPVSSGSVIAAI-SADL-NGNQEKRNGGNNQNRGDNNGEDM 157
Query: 159 VVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQH 218
+ +SG NW+NARYKA+IL+HPLYEQLLSAHV+CLRIATPVDQLPRIDAQLAQSQ
Sbjct: 158 LDCDSGG----NWENARYKADILAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAQSQG 213
Query: 219 VVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQS 278
VV+KYS L A Q L DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQS
Sbjct: 214 VVTKYSVL-ANQPL--DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQS 270
Query: 279 LQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERV 338
LQSLTGVSPGEGTGATMSDD++DQ DS+ NLFDGSL+GPD+MGFGPL+PTE+ERSLMERV
Sbjct: 271 LQSLTGVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETERSLMERV 330
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 331 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 384
>gi|167178664|gb|ABZ10963.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 408
Score = 465 bits (1196), Expect = e-128, Method: Compositional matrix adjust.
Identities = 257/403 (63%), Positives = 288/403 (71%), Gaps = 52/403 (12%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQ------QQQPPSPPQQQHHQHQQSIET-TAPNWLNS 53
MA+H + +SQ+LPL HF DQQ + QQ P + P Q S + T PNWLN+
Sbjct: 1 MAYH-SQMSQELPLQHFGDQQLAETTSSVMQQMPQASPDASGKQQASSEQNQTGPNWLNN 59
Query: 54 ALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLH 113
A+LR QQ Q S + FLNL ++N N + AS S
Sbjct: 60 AILRHQQNHQYGGDNS-SGFLNLHASSNPNGDRMMSAASMSH------------------ 100
Query: 114 RNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNN---KSEGVVVESGADGVVN 170
ESA+L + + N +S VVV G +G +N
Sbjct: 101 ---------------------ESANLGDGSRVGRNGNGEQELVVESGAVVVAGGVEGAMN 139
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG- 229
WQ+AR KAE+LSHPLYEQLLSAHV+CLRIATPVDQLPRIDAQL+QSQHVVSKYS LG G
Sbjct: 140 WQSARLKAEVLSHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLSQSQHVVSKYSGLGQGN 199
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
QGL+ DDKELDQFMT+YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV+PGE
Sbjct: 200 QGLMGDDKELDQFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVAPGE 259
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMSDD++DQVDSDANL+DG L+G DTMGFGPLIPTESERSLMERVRQELKHELKQG
Sbjct: 260 GTGATMSDDEDDQVDSDANLYDGGLDGLDTMGFGPLIPTESERSLMERVRQELKHELKQG 319
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 320 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 362
>gi|329757149|gb|AEC04754.1| knotted-like homeobox KNOX5 [Fragaria vesca]
Length = 368
Score = 458 bits (1179), Expect = e-126, Method: Compositional matrix adjust.
Identities = 224/260 (86%), Positives = 239/260 (91%), Gaps = 11/260 (4%)
Query: 135 ESADLKNANSENMNNASTNNKSE-GVVVES-GADGVVNWQNARYKAEILSHPLYEQLLSA 192
+SAD+KN +A+ NNKSE GV VES G DGV+NWQNAR+KAEIL+HPLYE LLSA
Sbjct: 4 DSADMKN-------DAALNNKSEGGVAVESGGGDGVMNWQNARHKAEILAHPLYEPLLSA 56
Query: 193 HVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCS 252
HVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS G G+V DDKELDQFM HYVLLLCS
Sbjct: 57 HVACLRIATPVDQLPRIDAQLAQSQNVVAKYS--GMSHGMVGDDKELDQFMRHYVLLLCS 114
Query: 253 FKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDG 312
FKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE+QVDSDANLFDG
Sbjct: 115 FKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEEQVDSDANLFDG 174
Query: 313 SLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPG 372
S++G D+MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPG
Sbjct: 175 SMDGHDSMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPG 234
Query: 373 DTTSVLKSWWQSHSKWPYPT 392
DTTSVLK+WWQSHSKWPYPT
Sbjct: 235 DTTSVLKAWWQSHSKWPYPT 254
>gi|357466089|ref|XP_003603329.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|132424659|gb|ABO33482.1| class II KNOX homeobox transcription factor [Medicago truncatula]
gi|355492377|gb|AES73580.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 371
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/396 (62%), Positives = 286/396 (72%), Gaps = 75/396 (18%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MA+H +QD PLHHFT +QQQP S P HH Q TAPNWLN+ALLR
Sbjct: 1 MAYH----NQDNPLHHFT-----EQQQPTSDP---HHSFQ-----TAPNWLNNALLR--- 40
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVI 120
N + + N ++++ SQ+ QWLSR +LHRNHS+VI
Sbjct: 41 --------------------NLDTNVNATATNNNNGSQSSGQWLSR---PILHRNHSEVI 77
Query: 121 DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI 180
DDVT A + A ES E+ A+GV+NWQ A++K EI
Sbjct: 78 DDVTGAG---MKAEESG------------------------EATAEGVMNWQKAKHKGEI 110
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD--KE 238
++HPLYEQLLSAHV+CLRIATPVDQLPRIDAQLA+SQ+VV+KYSALG QG++ +D K+
Sbjct: 111 MAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQ-QGMLDNDDNKQ 169
Query: 239 LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDD 298
LD FM+HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS+D
Sbjct: 170 LDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSED 229
Query: 299 DEDQVDSDANLFDGSLEGPDTM--GFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+++QVDSD NLFDG L+G D GFGPL+ TE+ERSLMERVR ELKHELKQGYKEKIVD
Sbjct: 230 EDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVD 289
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IREEILRKRRAGKLPGDTTSVLK WWQSHSKWPYPT
Sbjct: 290 IREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPT 325
>gi|357466091|ref|XP_003603330.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355492378|gb|AES73581.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 373
Score = 456 bits (1173), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/396 (62%), Positives = 286/396 (72%), Gaps = 75/396 (18%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MA+H +QD PLHHFT +QQQP S P HH Q TAPNWLN+ALLR
Sbjct: 1 MAYH----NQDNPLHHFT-----EQQQPTSDP---HHSFQ-----TAPNWLNNALLR--- 40
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVI 120
N + + N ++++ SQ+ QWLSR +LHRNHS+VI
Sbjct: 41 --------------------NLDTNVNATATNNNNGSQSSGQWLSR---PILHRNHSEVI 77
Query: 121 DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI 180
DDVT A + A ES E+ A+GV+NWQ A++K EI
Sbjct: 78 DDVTGAG---MKAEESG------------------------EATAEGVMNWQKAKHKGEI 110
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD--KE 238
++HPLYEQLLSAHV+CLRIATPVDQLPRIDAQLA+SQ+VV+KYSALG QG++ +D K+
Sbjct: 111 MAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAESQNVVAKYSALGQ-QGMLDNDDNKQ 169
Query: 239 LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDD 298
LD FM+HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS+D
Sbjct: 170 LDHFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSED 229
Query: 299 DEDQVDSDANLFDGSLEGPDTM--GFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+++QVDSD NLFDG L+G D GFGPL+ TE+ERSLMERVR ELKHELKQGYKEKIVD
Sbjct: 230 EDEQVDSDVNLFDGGLDGSDNSMGGFGPLVLTENERSLMERVRHELKHELKQGYKEKIVD 289
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IREEILRKRRAGKLPGDTTSVLK WWQSHSKWPYPT
Sbjct: 290 IREEILRKRRAGKLPGDTTSVLKDWWQSHSKWPYPT 325
>gi|3116212|dbj|BAA25921.1| NTH23 [Nicotiana tabacum]
Length = 422
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 254/410 (61%), Positives = 298/410 (72%), Gaps = 52/410 (12%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQ------QQQQPPSPPQQQHHQHQQSIETTAPNWLNSA 54
MA++ NH+SQ++ +HHF+D+ +Q S P + HQQ P WLNSA
Sbjct: 1 MAYNPNHMSQEMDMHHFSDENSAVLRSILPEQLAQSSPDVKPLDHQQ-----PPTWLNSA 55
Query: 55 LLRSQQAQQQAAHFSDT-------NFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRT 107
+LR Q +H++ T NFLNL + + ++ + + + WLSR
Sbjct: 56 ILR------QESHYTGTGGRGVGENFLNLHSNSESSAAASQASNQ----------WLSR- 98
Query: 108 SSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKS-----EGVVVE 162
S+L RN + DV +N+S A + +ADLKN + N N+ NN VV
Sbjct: 99 --SILRRN----VSDVQTSNNSS-AVIAAADLKNDDGNNNNDNGNNNAGGQLTDSEVVGG 151
Query: 163 SGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSK 222
G DG++NWQNA YKAEIL+HPL+EQLLSAHVACLRIATPVDQLPRIDAQLAQSQ VV+K
Sbjct: 152 GGTDGILNWQNAGYKAEILAHPLFEQLLSAHVACLRIATPVDQLPRIDAQLAQSQQVVAK 211
Query: 223 YSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 282
YS LG G DDKELDQF+THYVLLLC FKEQLQQHVRVHAMEAVMACWEIEQSLQSL
Sbjct: 212 YSTLGQNIG---DDKELDQFLTHYVLLLCPFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 268
Query: 283 TGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQEL 342
TGVSPGEGTGATMSDD++DQVDS+ANLFDGSL+G D M FG +PTESERSLMERVRQEL
Sbjct: 269 TGVSPGEGTGATMSDDEDDQVDSEANLFDGSLDGHDGMAFG--LPTESERSLMERVRQEL 326
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KH+LKQGYKEK+VDIREEILRKRRAGKLPGDTTSVLK+WWQSH+KWPYPT
Sbjct: 327 KHDLKQGYKEKLVDIREEILRKRRAGKLPGDTTSVLKAWWQSHAKWPYPT 376
>gi|296084578|emb|CBI25599.3| unnamed protein product [Vitis vinifera]
Length = 413
Score = 454 bits (1167), Expect = e-125, Method: Compositional matrix adjust.
Identities = 249/409 (60%), Positives = 284/409 (69%), Gaps = 70/409 (17%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQ-----------------QQQQQQPPSPPQQQHHQHQQSI 43
MAFH N LS D+ L HFTD Q PP H Q
Sbjct: 1 MAFH-NQLSHDMALQHFTDSHLTENTAVLRGILPEQLGQSSSDGAGKPPS--HQQLGGGG 57
Query: 44 ETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQW 103
P WLN+A+LR Q + ++D +FL+L+T N+++T+S + A+ T NQW
Sbjct: 58 GGGGPTWLNNAILRQQ------SQYADGSFLHLQT-------NSDSTSSPATATTTTNQW 104
Query: 104 LSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVES 163
LSR+ S+ N N N NN + + +S
Sbjct: 105 LSRSMSN------------------------------KRNGGNNQNRGDNNGEDMLDCDS 134
Query: 164 GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKY 223
G NW+NARYKA+IL+HPLYEQLLSAHV+CLRIATPVDQLPRIDAQLAQSQ VV+KY
Sbjct: 135 GG----NWENARYKADILAHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAQSQGVVTKY 190
Query: 224 SALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
S L A Q L DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQSLT
Sbjct: 191 SVL-ANQPL--DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLT 247
Query: 284 GVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
GVSPGEGTGATMSDD++DQ DS+ NLFDGSL+GPD+MGFGPL+PTE+ERSLMERVRQELK
Sbjct: 248 GVSPGEGTGATMSDDEDDQADSEINLFDGSLDGPDSMGFGPLVPTETERSLMERVRQELK 307
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
HELKQGYKEKIVDIREEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 308 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 356
>gi|356563910|ref|XP_003550200.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 405
Score = 453 bits (1166), Expect = e-125, Method: Compositional matrix adjust.
Identities = 257/402 (63%), Positives = 282/402 (70%), Gaps = 53/402 (13%)
Query: 1 MAFH--HNHLSQDLP-LHHFTDQQQQQQQQ-------PPSPPQQQHHQHQQSIETTAPNW 50
MA+H HN QDLP LHHF +Q QQ P S P H Q TAPNW
Sbjct: 1 MAYHNHHNLSQQDLPPLHHFPNQSMLPDQQLLPSSPEPNSKPPSDPHPLQ-----TAPNW 55
Query: 51 LNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSS 110
LN ALLR+ TN N+ N +N N + SDA QWL+R +
Sbjct: 56 LNDALLRTHYTDTTNTATVATNS-NVNVKVNGSNFLKLNPGA-SDA-----QWLARPA-- 106
Query: 111 LLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
LHR+ +VIDD A +S+ VE ADLK+ G V+
Sbjct: 107 -LHRHPGEVIDDG--AGESM---VEHADLKD----------------------GGGDAVS 138
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
WQ R K EIL HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KY+ G
Sbjct: 139 WQIGRCKTEILQHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYAVFGHN- 197
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
+V DDKELDQFM+HYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGVSPGEG
Sbjct: 198 NIVADDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEG 257
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TGATMSDD+ DQVDSDANLFD S +G D+MGFGPL+PTESERSLMERVRQELKHELKQGY
Sbjct: 258 TGATMSDDENDQVDSDANLFDCSFDGADSMGFGPLVPTESERSLMERVRQELKHELKQGY 317
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 318 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 359
>gi|449441886|ref|XP_004138713.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 462
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 271/427 (63%), Positives = 309/427 (72%), Gaps = 58/427 (13%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPP------QQQHHQHQQSIETT-------- 46
MAF +HLS+DLPLH+ QQQQ ++P S Q H + + +
Sbjct: 1 MAFR-SHLSRDLPLHYANQSQQQQSERPLSDNTLRSILSDQLTDHSTAADGSKSENPLQS 59
Query: 47 APNWLNSALLRSQ--------QAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQ 98
APNWLN+ALLR+Q + AA +T+FLNL TTA N++
Sbjct: 60 APNWLNTALLRNQTPHSHYSGETTTTAADNVNTDFLNLHTTAPNSSG------------- 106
Query: 99 TPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAV-----ESADLKNANSENMNNASTN 153
QWLSR +LHRN SDVIDDV A D++I A ES DLKN +S +
Sbjct: 107 ---QWLSR---PILHRNQSDVIDDVADAADAMIGATATLSRESDDLKNNSSGGGGDGVN- 159
Query: 154 NKSEGVVVES-------GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQL 206
S+ V VES G + +NWQNA++KAEIL+HPLYEQLLSAHVACLRIATPVDQL
Sbjct: 160 -NSDDVAVESDCNEGARGGEAAMNWQNAQFKAEILAHPLYEQLLSAHVACLRIATPVDQL 218
Query: 207 PRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 265
PRID+QL++SQ+V +KYS+LG G Q +V++ KELDQFMTHYV LLCSFKEQLQQHVRVHA
Sbjct: 219 PRIDSQLSRSQNVAAKYSSLGNGSQSIVSNGKELDQFMTHYVFLLCSFKEQLQQHVRVHA 278
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAV ACWEIEQSLQSLTGVSPG GTGATMSDDDEDQ+DSDA +FDGSLEG DTMGFGPL
Sbjct: 279 MEAVYACWEIEQSLQSLTGVSPGVGTGATMSDDDEDQIDSDA-MFDGSLEGHDTMGFGPL 337
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
IPTESERSLMERVR ELKHELK GYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSH
Sbjct: 338 IPTESERSLMERVRHELKHELKNGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 397
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 398 SKWPYPT 404
>gi|449527309|ref|XP_004170654.1| PREDICTED: homeobox protein knotted-1-like 3-like [Cucumis sativus]
Length = 461
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 271/427 (63%), Positives = 309/427 (72%), Gaps = 58/427 (13%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPP------QQQHHQHQQSIETT-------- 46
MAF +HLS+DLPLH+ QQQQ ++P S Q H + + +
Sbjct: 1 MAFR-SHLSRDLPLHYANQSQQQQSERPLSDNTLRSILSDQLTDHSTAADGSKSENPLQS 59
Query: 47 APNWLNSALLRSQ--------QAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQ 98
APNWLN+ALLR+Q + AA +T+FLNL TTA N++
Sbjct: 60 APNWLNTALLRNQTPHSHYSGETTTTAADNVNTDFLNLHTTAPNSSG------------- 106
Query: 99 TPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAV-----ESADLKNANSENMNNASTN 153
QWLSR +LHRN SDVIDDV A D++I A ES DLKN +S +
Sbjct: 107 ---QWLSR---PILHRNQSDVIDDVADAADAMIGATATLSRESDDLKNNSSGGGGDGVN- 159
Query: 154 NKSEGVVVES-------GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQL 206
S+ V VES G + +NWQNA++KAEIL+HPLYEQLLSAHVACLRIATPVDQL
Sbjct: 160 -NSDDVAVESDCNEGARGGEAAMNWQNAQFKAEILAHPLYEQLLSAHVACLRIATPVDQL 218
Query: 207 PRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 265
PRID+QL++SQ+V +KYS+LG G Q +V++ KELDQFMTHYV LLCSFKEQLQQHVRVHA
Sbjct: 219 PRIDSQLSRSQNVAAKYSSLGNGSQSIVSNGKELDQFMTHYVFLLCSFKEQLQQHVRVHA 278
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAV ACWEIEQSLQSLTGVSPG GTGATMSDDDEDQ+DSDA +FDGSLEG DTMGFGPL
Sbjct: 279 MEAVYACWEIEQSLQSLTGVSPGVGTGATMSDDDEDQIDSDA-MFDGSLEGHDTMGFGPL 337
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
IPTESERSLMERVR ELKHELK GYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSH
Sbjct: 338 IPTESERSLMERVRHELKHELKNGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 397
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 398 SKWPYPT 404
>gi|373938269|dbj|BAL46506.1| Knotted1-like homeobox protein [Diospyros kaki]
Length = 438
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 261/425 (61%), Positives = 292/425 (68%), Gaps = 66/425 (15%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQ-------------QQQQQQPPSPPQQQH----------- 36
MAF NHLSQ++ L HFT Q +Q Q P ++H
Sbjct: 1 MAFP-NHLSQEMALQHFTGQHLGENTSVLRRYLPEQLGQSSPDGAGKEHKEIQRLILESA 59
Query: 37 ------HQHQQSIETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNT 90
H HQ P WLNSA+LR Q Q NFLNL+T
Sbjct: 60 AGKAAEHHHQPQQVGVGPTWLNSAILR-QHGQ---------NFLNLQT------------ 97
Query: 91 ASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAV---ESADLKNANSENM 147
A+D+ SQ NQWLSR+ +H N DV DDV +NDS+IAA ESADL N EN
Sbjct: 98 ATDATTSQASNQWLSRS----IHVN--DVRDDVQVSNDSMIAAGISHESADLNNNKVENG 151
Query: 148 NNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLP 207
+ V G DG++NWQNA+YKAEIL+HPLYEQLLSAHVACLRIATPVDQLP
Sbjct: 152 GGGGGGELAGTDV--GGGDGILNWQNAKYKAEILAHPLYEQLLSAHVACLRIATPVDQLP 209
Query: 208 RIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAME 267
RIDAQLAQSQHVV+KYSALG G + +DKELDQFMTHYVLLLCSFKEQLQQHVRVH ME
Sbjct: 210 RIDAQLAQSQHVVAKYSALG-GPTSIGNDKELDQFMTHYVLLLCSFKEQLQQHVRVHVME 268
Query: 268 AVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIP 327
AVMACWEIEQSLQSLTG+ PGEGTGATMSDDD+DQVDSD NLFD +L+GPD+M FGPLIP
Sbjct: 269 AVMACWEIEQSLQSLTGIPPGEGTGATMSDDDDDQVDSDTNLFDANLDGPDSMNFGPLIP 328
Query: 328 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSK 387
TESERSLMERVRQELKHELK+ + K+ + ILRKRRAGKLPGDTTSVLK+WWQSHSK
Sbjct: 329 TESERSLMERVRQELKHELKRVTRRKLWTL-GRILRKRRAGKLPGDTTSVLKAWWQSHSK 387
Query: 388 WPYPT 392
WPYPT
Sbjct: 388 WPYPT 392
>gi|21539535|gb|AAM53320.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
gi|23197862|gb|AAN15458.1| KNAT3 homeodomain protein [Arabidopsis thaliana]
Length = 306
Score = 444 bits (1143), Expect = e-122, Method: Compositional matrix adjust.
Identities = 214/247 (86%), Positives = 227/247 (91%), Gaps = 5/247 (2%)
Query: 147 MNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQL 206
M NK++G + ADGVV+WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQL
Sbjct: 6 MKTGGGENKNDGGGA-TAADGVVSWQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQL 64
Query: 207 PRIDAQLAQSQHVVSKYSALGAG-QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 265
PRIDAQLAQSQHVV+KYSALGA QGLV DDKELDQFMTHYVLLLCSFKEQLQQHVRVHA
Sbjct: 65 PRIDAQLAQSQHVVAKYSALGAAAQGLVGDDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 124
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVMACWEIEQSLQSLTGVSPGEG GATMSDD+++QV+SDAN+FDG L D +GFGPL
Sbjct: 125 MEAVMACWEIEQSLQSLTGVSPGEGMGATMSDDEDEQVESDANMFDGGL---DVLGFGPL 181
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSH
Sbjct: 182 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 241
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 242 SKWPYPT 248
>gi|9795158|emb|CAC03454.1| HOMEOBOX PROTEIN KNOTTED-1 LIKE 4 (KNAT4) [Arabidopsis thaliana]
Length = 419
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/403 (64%), Positives = 287/403 (71%), Gaps = 77/403 (19%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFH+NH + HFTDQQQ Q PP QQQH Q E+ PNWL LRS
Sbjct: 1 MAFHNNHFN------HFTDQQQHQPPPPPQQQQQQHFQ-----ESAPPNWL----LRS-- 43
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
D NFLNL T ++ T+SDS +S NQWLSR SSS L R ++
Sbjct: 44 ---------DNNFLNLHTA-----ASAAATSSDSPSSAAANQWLSR-SSSFLQRGNTANN 88
Query: 118 -------DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
DVI+DV +S+I + A+
Sbjct: 89 NNNETSGDVIEDVPGGEESMIGEKKEAE-------------------------------R 117
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L A Q
Sbjct: 118 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQ 177
Query: 231 GLVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
GL+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGE
Sbjct: 178 GLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE 237
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMS+D+++QV+SDA+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQG
Sbjct: 238 GTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQG 294
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 295 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>gi|30683467|ref|NP_196667.2| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
gi|73915316|sp|P48001.3|KNAT4_ARATH RecName: Full=Homeobox protein knotted-1-like 4; AltName:
Full=Protein KNAT4
gi|26451634|dbj|BAC42914.1| putative homeobox protein knotted-1 like4 KNAT4 [Arabidopsis
thaliana]
gi|332004247|gb|AED91630.1| homeobox protein knotted-1-like 4 [Arabidopsis thaliana]
Length = 393
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 261/403 (64%), Positives = 287/403 (71%), Gaps = 77/403 (19%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFH+NH + HFTDQQQ Q PP QQQH Q E+ PNWL LRS
Sbjct: 1 MAFHNNHFN------HFTDQQQHQPPPPPQQQQQQHFQ-----ESAPPNWL----LRS-- 43
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
D NFLNL T A+ T+SDS +S NQWLSR SSS L R ++
Sbjct: 44 ---------DNNFLNLHTAASAAA-----TSSDSPSSAAANQWLSR-SSSFLQRGNTANN 88
Query: 118 -------DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
DVI+DV +S+I + A+
Sbjct: 89 NNNETSGDVIEDVPGGEESMIGEKKEAE-------------------------------R 117
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L A Q
Sbjct: 118 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQ 177
Query: 231 GLVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
GL+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGE
Sbjct: 178 GLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE 237
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMS+D+++QV+SDA+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQG
Sbjct: 238 GTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQG 294
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 295 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>gi|336112105|gb|AEI17371.1| Knox-like protein 3 [Capsella rubella]
Length = 391
Score = 442 bits (1138), Expect = e-121, Method: Compositional matrix adjust.
Identities = 257/409 (62%), Positives = 289/409 (70%), Gaps = 77/409 (18%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFH+NH + HFTDQQQQQ PP QQ H E+ PNWL LRS
Sbjct: 1 MAFHNNHFN------HFTDQQQQQPPPPPQQQQQHFH------ESAPPNWL----LRS-- 42
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
D NFLNL+T+ ++ T+SDS +S NQWLSR SSS L R +
Sbjct: 43 ---------DNNFLNLQTS-----ASAAATSSDSPSSAAANQWLSR-SSSFLQRGGAASN 87
Query: 118 ------DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNW 171
DV++DVT +S+I + A+ W
Sbjct: 88 NATGSGDVVEDVTGGEESMIGEKKEAE-------------------------------RW 116
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
QNA++KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L QG
Sbjct: 117 QNAKHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLDTAQG 176
Query: 232 LVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
L+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGEG
Sbjct: 177 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 236
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TGATMS+D+++QV+SDA+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQGY
Sbjct: 237 TGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQGY 293
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
KEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT L+
Sbjct: 294 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPTEDKARLV 342
>gi|312283117|dbj|BAJ34424.1| unnamed protein product [Thellungiella halophila]
Length = 388
Score = 442 bits (1137), Expect = e-121, Method: Compositional matrix adjust.
Identities = 255/403 (63%), Positives = 281/403 (69%), Gaps = 82/403 (20%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHNH + HFTDQQ + PP Q H E+ PNWL LRS
Sbjct: 1 MAFHHNHFN------HFTDQQHEPPPPPPPQQQHFH-------ESAPPNWL----LRS-- 41
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNH---- 116
D NFLNL T A T+SDS +S NQWLSR SSS L R
Sbjct: 42 ---------DNNFLNLHTAAA--------TSSDSPSSAAANQWLSR-SSSFLQRGAASNN 83
Query: 117 -----SDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNW 171
DVIDD+ +S+I + A+ W
Sbjct: 84 NNAASGDVIDDINGGEESMIGEKKEAE-------------------------------RW 112
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL-GAGQ 230
QNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ+Q+VV+KYS+L A Q
Sbjct: 113 QNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQTQNVVAKYSSLEAAAQ 172
Query: 231 GLVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
GL+ D+KELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGE
Sbjct: 173 GLIAGDEKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE 232
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMS+D+++QVDSDA+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQG
Sbjct: 233 GTGATMSEDEDEQVDSDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQG 289
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 290 YKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 332
>gi|1045044|emb|CAA63131.1| KNAT4 homeobox protein [Arabidopsis thaliana]
Length = 393
Score = 441 bits (1133), Expect = e-121, Method: Compositional matrix adjust.
Identities = 259/403 (64%), Positives = 286/403 (70%), Gaps = 77/403 (19%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFH+NH + HFTDQQQ Q PP QQQH Q E+ PNWL LRS
Sbjct: 1 MAFHNNHFN------HFTDQQQHQPPPPPQQQQQQHFQ-----ESAPPNWL----LRS-- 43
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
D NFLNL + + T+SDS +S NQWLSR SSS L R ++
Sbjct: 44 ---------DNNFLNL-----HTAATAAATSSDSPSSAAANQWLSR-SSSFLQRGNTANN 88
Query: 118 -------DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
DVI+DV +S+I + A+
Sbjct: 89 NNNETSGDVIEDVPGGEESMIGEKKEAE-------------------------------R 117
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
WQNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L A Q
Sbjct: 118 WQNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQ 177
Query: 231 GLVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
GL+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGE
Sbjct: 178 GLLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGE 237
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTGATMS+D+++QV+SDA+LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQG
Sbjct: 238 GTGATMSEDEDEQVESDAHLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQG 294
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 295 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 337
>gi|297807137|ref|XP_002871452.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
gi|297317289|gb|EFH47711.1| KNAT4 homeobox protein [Arabidopsis lyrata subsp. lyrata]
Length = 391
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 261/402 (64%), Positives = 285/402 (70%), Gaps = 77/402 (19%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFH+NH + HFTDQQQ Q PP P QQQ QH E+ PNWL LRS
Sbjct: 1 MAFHNNHFN------HFTDQQQHQPSPPPPPSQQQQQQHFH--ESAPPNWL----LRS-- 46
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS--- 117
D NFLNL T A T+SDS +S NQWLSR SSS L R +
Sbjct: 47 ---------DNNFLNLHTAA---------TSSDSPSSAAANQWLSR-SSSFLQRGGTANN 87
Query: 118 ------DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNW 171
DVI+DV +S+I + A+ W
Sbjct: 88 NDETSGDVIEDVAGGEESMIGEKKEAE-------------------------------RW 116
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
QNAR+KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ+VV+KYS L A QG
Sbjct: 117 QNARHKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQNVVAKYSTLEAAQG 176
Query: 232 LVT-DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
L+ DDKELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS TGVSPGEG
Sbjct: 177 LLAGDDKELDHFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSFTGVSPGEG 236
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TGATMS+D+++QV+SDA LFDGSL+G +GFGPL+PTESERSLMERVRQELKHELKQGY
Sbjct: 237 TGATMSEDEDEQVESDAPLFDGSLDG---LGFGPLVPTESERSLMERVRQELKHELKQGY 293
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 294 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 335
>gi|356552494|ref|XP_003544602.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 407
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 259/411 (63%), Positives = 291/411 (70%), Gaps = 69/411 (16%)
Query: 1 MAFHHNHLSQ-DLPLHHFTDQQ--QQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLR 57
MA+H+++LSQ DLPLHHF +Q QQQQ PS P+ + S TAPNWLN ALLR
Sbjct: 1 MAYHNHNLSQQDLPLHHFPNQSILPDQQQQLPSSPEP--NSKPPSDLQTAPNWLNDALLR 58
Query: 58 SQ----------------QAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPN 101
+ A ++ + +NFLNL N ASD+
Sbjct: 59 THYTETTTNDATTNTATVAAAAANSNVNGSNFLNL-----------NPGASDA------- 100
Query: 102 QWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVV 161
QW + LHR+ +VID A DS+ VE ADLK + +A
Sbjct: 101 QWPA------LHRHPGEVID--AGAGDSM---VEHADLKGGGGDGGGDA----------- 138
Query: 162 ESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS 221
VNWQ R+KAEIL HPLYEQLLSAHV+CLRIATPVDQLPRIDAQLAQSQ+VV+
Sbjct: 139 -------VNWQIGRWKAEILQHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVA 191
Query: 222 KYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS 281
KY+A G +V DDKELDQFM+HYVLLLCSFKEQLQQHVRVHAMEAVMACW+IEQSLQS
Sbjct: 192 KYAAFGHN-NIVADDKELDQFMSHYVLLLCSFKEQLQQHVRVHAMEAVMACWDIEQSLQS 250
Query: 282 LTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE 341
LTGVSPGEGTGATMSDD++DQVDSDANLFD S +G D MGFGPL+PTESERSLMERVRQE
Sbjct: 251 LTGVSPGEGTGATMSDDEDDQVDSDANLFDSSFDGADGMGFGPLVPTESERSLMERVRQE 310
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 311 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 361
>gi|168199347|gb|ABZ10964.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 384
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 223/392 (56%), Positives = 263/392 (67%), Gaps = 61/392 (15%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MA+ NH + + L H DQQ + A WLNS ++
Sbjct: 1 MAYQ-NHPAHQMELQHLADQQLTEGSGG-----------GGGSGGGAMTWLNSGVV---- 44
Query: 61 AQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDVI 120
QQ +++ NFL+L+T N+ S+N+ TA+ N+++ HSD
Sbjct: 45 -QQHDNRYTEGNFLHLQT---NSGSSNSPTAA--------NRYMP----------HSDES 82
Query: 121 DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI 180
D+ S + D N+E G VNW+NAR KAE+
Sbjct: 83 DNHKRGGGSRVNDRYGKDEDAGNNEY--------------------GAVNWENARCKAEV 122
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
LSHPLYEQLLSAHV+CLRIATPVDQLPRIDAQL QSQ VV+KY A+G G DDKELD
Sbjct: 123 LSHPLYEQLLSAHVSCLRIATPVDQLPRIDAQLVQSQSVVAKYLAVGPGN---LDDKELD 179
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE 300
QFMT+YVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQ+LTGVSPGEG G TMSDD++
Sbjct: 180 QFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQTLTGVSPGEGNGETMSDDED 239
Query: 301 DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
+ +DSD +LFDGSL+ PD+MGFGPLI T+SERSLMERVRQELKHELK GYK+KIVDIREE
Sbjct: 240 NHMDSDTHLFDGSLDSPDSMGFGPLILTDSERSLMERVRQELKHELKNGYKDKIVDIREE 299
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ILRKRRAGKLPGDTTS LK+WW+SHSKWPYPT
Sbjct: 300 ILRKRRAGKLPGDTTSHLKAWWKSHSKWPYPT 331
>gi|356530621|ref|XP_003533879.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 339
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 184/219 (84%), Positives = 206/219 (94%), Gaps = 1/219 (0%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
A YKA+IL HPLY+QLLSAHV+CLRIATPVDQLPRIDAQL QSQ VV KYS LG G G+V
Sbjct: 64 AEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVDKYSGLGNGNGVV 123
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
DDKELDQFMTHYV+LLC+FKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGVSPGEGTGA
Sbjct: 124 -DDKELDQFMTHYVILLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGA 182
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
TMSD++EDQ +S+ANL++G ++G D++ FGPL+PTE+ERSLMERVRQELKHELKQGYK+K
Sbjct: 183 TMSDNEEDQAESNANLYEGGMDGADSLSFGPLVPTETERSLMERVRQELKHELKQGYKDK 242
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IVDIREEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 243 IVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 281
>gi|224142451|ref|XP_002324571.1| predicted protein [Populus trichocarpa]
gi|222866005|gb|EEF03136.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/242 (78%), Positives = 213/242 (88%), Gaps = 5/242 (2%)
Query: 151 STNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 210
+TNN SE +V+S +D NW+ A+ KAEIL HP YEQLL+AHVACLRIATPVDQL RID
Sbjct: 3 TTNNGSEEELVDSVSD---NWERAKCKAEILGHPFYEQLLAAHVACLRIATPVDQLARID 59
Query: 211 AQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVM 270
QLA+SQ V++KYS +G G V D+KELDQFMTHY LLLCSFK+QLQQHVRVHAMEAVM
Sbjct: 60 TQLARSQDVIAKYSGVGCGH--VVDEKELDQFMTHYALLLCSFKDQLQQHVRVHAMEAVM 117
Query: 271 ACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTES 330
ACWE+EQSLQSLTGVSPGEGTGATMSDD++DQ +SD N DG+L+G DTMGFGPL+PTE+
Sbjct: 118 ACWELEQSLQSLTGVSPGEGTGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTET 177
Query: 331 ERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPY 390
ERSLMERVRQELKHE KQ YKEKIVDIREEILRKRRAGKLPGDTTS LK+WWQ+HSKWPY
Sbjct: 178 ERSLMERVRQELKHEFKQDYKEKIVDIREEILRKRRAGKLPGDTTSHLKAWWQTHSKWPY 237
Query: 391 PT 392
P+
Sbjct: 238 PS 239
>gi|356562896|ref|XP_003549704.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 344
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/217 (85%), Positives = 206/217 (94%), Gaps = 2/217 (0%)
Query: 176 YKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD 235
YKA+IL HPLY+QLLSAHV+CLRIATPVDQLPRIDAQL QSQ VV KYSAL A G+V D
Sbjct: 73 YKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSAL-AHNGVV-D 130
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
+KELDQFMTHYVLLLC+FKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGEGTGATM
Sbjct: 131 EKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEGTGATM 190
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
SDD++DQ +S+ANL++GSL+G +T+GFGPL+PTESERSLMERVR ELKHELKQGYKEKIV
Sbjct: 191 SDDEDDQAESNANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 250
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
DIREEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 251 DIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 287
>gi|356548471|ref|XP_003542625.1| PREDICTED: homeobox protein knotted-1-like 3-like [Glycine max]
Length = 345
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 186/217 (85%), Positives = 206/217 (94%), Gaps = 2/217 (0%)
Query: 176 YKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD 235
YKA+IL HPLY+QLLSAHV+CLRIATPVDQLPRIDAQL QSQ VV KYSAL A G+V D
Sbjct: 74 YKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVEKYSAL-AHNGVV-D 131
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
+KELDQFMTHYVLLLC+FKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVSPGEGTGATM
Sbjct: 132 EKELDQFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSPGEGTGATM 191
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
SDD++DQ +S+ANL++GSL+G +T+GFGPL+PTESERSLMERVR ELKHELKQGYKEKIV
Sbjct: 192 SDDEDDQAESNANLYEGSLDGGETLGFGPLVPTESERSLMERVRHELKHELKQGYKEKIV 251
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
DIREEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 252 DIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 288
>gi|167178668|gb|ABZ10965.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 409
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 183/239 (76%), Positives = 213/239 (89%), Gaps = 3/239 (1%)
Query: 155 KSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 214
K E +++ S GV+NW+NAR+KAEILSHPLY+QLL+AHV+CLRIATPVDQLPRIDAQLA
Sbjct: 115 KEEEMMIVSEYGGVINWENARFKAEILSHPLYDQLLAAHVSCLRIATPVDQLPRIDAQLA 174
Query: 215 QSQHVVSKYSALGAGQGLVTDDKE-LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACW 273
QSQ++ +KY+A A QG DDK+ LDQFMT YVLLL SFK+QLQQHVRVHAMEAVMACW
Sbjct: 175 QSQNLAAKYAA--AVQGSCADDKDQLDQFMTQYVLLLSSFKDQLQQHVRVHAMEAVMACW 232
Query: 274 EIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERS 333
++EQ+LQ+LTGVSPGEGTGATMSDD+ D D + N+FD ++ D+MGFGPL+PT+SERS
Sbjct: 233 DLEQALQNLTGVSPGEGTGATMSDDENDHADGETNMFDSGMDCSDSMGFGPLVPTDSERS 292
Query: 334 LMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LMERVRQELKHELKQGYK+KIVDIREEILRKRRAGKLPGDTTS LK+WW+SHSKWPYPT
Sbjct: 293 LMERVRQELKHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWRSHSKWPYPT 351
>gi|357145509|ref|XP_003573667.1| PREDICTED: homeobox protein knotted-1-like 13-like [Brachypodium
distachyon]
Length = 367
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 192/237 (81%), Positives = 207/237 (87%), Gaps = 4/237 (1%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
E V G VV AR KAE+L+HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS
Sbjct: 81 EVVAAAMGGGMVVEEAEARSKAEVLAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 140
Query: 217 QHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIE 276
Q VV+KYS G G D +ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+E
Sbjct: 141 QGVVAKYSTAG-GLAAGDDTRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELE 199
Query: 277 QSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTM-GFGPLIPTESERSLM 335
Q+LQSLTGVSPGEGTGATMSD ++DQ DS+AN++D SL+GPD+M GFG +PTESERSLM
Sbjct: 200 QNLQSLTGVSPGEGTGATMSDGEDDQADSEANMYDASLDGPDSMGGFG--LPTESERSLM 257
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ERVRQELKHELKQGYKEK+VDIREEILRKRRAGKLPGDTTS LKSWWQSHSKWPYPT
Sbjct: 258 ERVRQELKHELKQGYKEKLVDIREEILRKRRAGKLPGDTTSTLKSWWQSHSKWPYPT 314
>gi|224091647|ref|XP_002309315.1| predicted protein [Populus trichocarpa]
gi|222855291|gb|EEE92838.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/242 (81%), Positives = 220/242 (90%), Gaps = 5/242 (2%)
Query: 151 STNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 210
+TNN SE +++S +D NW+ A+ KAEIL HPLYEQLL+AHVACLRIATPVDQL RID
Sbjct: 3 NTNNGSEEELIDSVSD---NWERAKCKAEILGHPLYEQLLAAHVACLRIATPVDQLARID 59
Query: 211 AQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVM 270
QLAQSQ VV+KYS G G+ V D+KELDQFMTHYV+LLCSFK+QLQQHVRVHAMEAVM
Sbjct: 60 TQLAQSQDVVAKYS--GVGRSHVVDEKELDQFMTHYVILLCSFKDQLQQHVRVHAMEAVM 117
Query: 271 ACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTES 330
ACWE+EQSLQSLTGVSPGEGTGATMSDDD+DQ DSDANL+DG+L+G DTMGFGPL+PTE+
Sbjct: 118 ACWELEQSLQSLTGVSPGEGTGATMSDDDDDQADSDANLYDGNLDGLDTMGFGPLVPTET 177
Query: 331 ERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPY 390
ERSLMERVRQELKHELKQ YKEKIVDIREEILRKRRAGKLPGDTTS+LK+WWQ+HSKWPY
Sbjct: 178 ERSLMERVRQELKHELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQTHSKWPY 237
Query: 391 PT 392
PT
Sbjct: 238 PT 239
>gi|356556581|ref|XP_003546603.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
3-like [Glycine max]
Length = 369
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 183/219 (83%), Positives = 203/219 (92%), Gaps = 2/219 (0%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
A YKA+IL HPLY+QLLSAHV+CLRIATPVDQLPRIDAQL QSQ VV KYS +G G G+V
Sbjct: 95 AEYKADILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQSQRVVDKYSGIGNGNGVV 154
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
DDKELDQFMTHYV+LLC+FKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGVSPGEGTGA
Sbjct: 155 -DDKELDQFMTHYVILLCAFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGA 213
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
TMSDD+EDQ +S+AN S++G D++ FGPL+PTE+ERSLMERVRQELKHELKQGYK+K
Sbjct: 214 TMSDDEEDQAESNANX-SRSMDGADSLSFGPLVPTETERSLMERVRQELKHELKQGYKDK 272
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IVDIREEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 273 IVDIREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 311
>gi|365222902|gb|AEW69803.1| Hop-interacting protein THI041 [Solanum lycopersicum]
Length = 430
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/363 (60%), Positives = 262/363 (72%), Gaps = 19/363 (5%)
Query: 32 PQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNN--N 89
P+ HH ++S P WLN++LLR Q +Q F + + + A NN +
Sbjct: 33 PESPHHDARKS----PPTWLNTSLLRQQHSQ-----FGNASSPSSAAAAAAVAGGNNFLH 83
Query: 90 TASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNN 149
+ + S NQWLS T+++ ND + ++ A K + ++
Sbjct: 84 LQTSNSDSSNSNQWLSPTAAAG-----GGGNGGGGGHNDELSESMNFA--KKMSQQHSGG 136
Query: 150 ASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRI 209
NN + + + +W+ + KA+IL+HPLY+QLLSAHV+CLRIATPVDQLPRI
Sbjct: 137 GEENNNNNNNNNNNNNEEENSWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRI 196
Query: 210 DAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV 269
DAQLAQSQ+VV+KYS LG GQ + DDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAV
Sbjct: 197 DAQLAQSQNVVAKYSVLGQGQPPL-DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAV 255
Query: 270 MACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTE 329
MACWE+EQSLQSLTGV+PGEGTGATMSDDD+DQ DSD N DG +GPD+MGFGPL+PTE
Sbjct: 256 MACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTE 315
Query: 330 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWP 389
SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWP
Sbjct: 316 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWP 375
Query: 390 YPT 392
YPT
Sbjct: 376 YPT 378
>gi|350535567|ref|NP_001233945.1| homeobox protein knotted-1-like LET12 [Solanum lycopersicum]
gi|6016226|sp|O22300.1|LET12_SOLLC RecName: Full=Homeobox protein knotted-1-like LET12
gi|2529703|gb|AAC49918.1| class II knotted-like homeodomain protein [Solanum lycopersicum]
Length = 426
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 220/363 (60%), Positives = 263/363 (72%), Gaps = 19/363 (5%)
Query: 32 PQQQHHQHQQSIETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNN--N 89
P+ HH ++S P WLN++LLR Q +Q F + + + A NN +
Sbjct: 33 PESPHHDARKS----PPTWLNTSLLRQQHSQ-----FGNASSPSSAAAAAAVAGGNNFLH 83
Query: 90 TASDSDASQTPNQWLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNN 149
+ + S NQWLS T+++ + ND + ++ A K + ++
Sbjct: 84 LQTSNSDSSNSNQWLSPTAAAG-----GGSNGGGSGHNDELSESMNFA--KKMSQQHSGG 136
Query: 150 ASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRI 209
NN + + + +W+ + KA+IL+HPLY+QLLSAHV+CLRIATPVDQLPRI
Sbjct: 137 GEENNNNNNNNNNNNNEEENSWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRI 196
Query: 210 DAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV 269
DAQLAQSQ+VV+KYS LG GQ + DDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAV
Sbjct: 197 DAQLAQSQNVVAKYSVLGQGQPPL-DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAV 255
Query: 270 MACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTE 329
MACWE+EQSLQSLTGV+PGEGTGATMSDDD+DQ DSD N DG +GPD+MGFGPL+PTE
Sbjct: 256 MACWELEQSLQSLTGVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTE 315
Query: 330 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWP 389
SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWP
Sbjct: 316 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWP 375
Query: 390 YPT 392
YPT
Sbjct: 376 YPT 378
>gi|4098244|gb|AAD09582.1| homeobox 1 protein, partial [Solanum lycopersicum]
Length = 392
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 217/349 (62%), Positives = 258/349 (73%), Gaps = 15/349 (4%)
Query: 46 TAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRTTANNNNSNNN--NTASDSDASQTPNQW 103
+ P WLN++LLR Q +Q F +++ + A NN + + + S NQW
Sbjct: 5 SPPTWLNTSLLRQQHSQ-----FGNSSSPSSAAAAAAVAGGNNFLHLQTSNSDSSNSNQW 59
Query: 104 LSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVES 163
LS T+++ N ND + ++ A K + ++ NN + +
Sbjct: 60 LSPTAAAGGGGNGGGGGH-----NDELSESMNFA--KKMSQQHSGGGEENNNNNNNNNNN 112
Query: 164 GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKY 223
+ +W+ + KA+IL+HPLY+QLLSAHV+CLRIATPVDQLPRIDAQLAQSQ+VV+KY
Sbjct: 113 NNEEENSWEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKY 172
Query: 224 SALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
S LG GQ + DDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACWE+EQSLQSLT
Sbjct: 173 SVLGQGQPPL-DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLT 231
Query: 284 GVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
GV+PGEGTGATMSDDD+DQ DSD N DG +GPD+MGFGPL+PTESERSLMERVRQELK
Sbjct: 232 GVAPGEGTGATMSDDDDDQADSDTNFLDGGFDGPDSMGFGPLVPTESERSLMERVRQELK 291
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 292 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 340
>gi|15236649|ref|NP_194932.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
gi|12644283|sp|P48002.2|KNAT5_ARATH RecName: Full=Homeobox protein knotted-1-like 5; AltName:
Full=Homeodomain-containing protein 1; AltName:
Full=Protein KNAT5
gi|17224610|gb|AAL37042.1|AF306661_1 homeodomain transcription factor KNAT5 [Arabidopsis thaliana]
gi|2506031|dbj|BAA22602.1| homeodomein containing protein 1 [Arabidopsis thaliana]
gi|3858938|emb|CAA16585.1| homeodomain containing protein 1 [Arabidopsis thaliana]
gi|7270108|emb|CAB79922.1| homeodomain containing protein 1 [Arabidopsis thaliana]
gi|109946421|gb|ABG48389.1| At4g32040 [Arabidopsis thaliana]
gi|332660597|gb|AEE85997.1| homeobox protein knotted-1-like 5 [Arabidopsis thaliana]
Length = 383
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 213/397 (53%), Positives = 259/397 (65%), Gaps = 70/397 (17%)
Query: 1 MAFHHNHL---SQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLR 57
M+F+ +HL +DLPL HFTDQ QQ PP Q+H S+ T +
Sbjct: 1 MSFNSSHLLPPQEDLPLRHFTDQSQQ-------PPPQRHFSETPSLVTAS---------- 43
Query: 58 SQQAQQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHS 117
FLNL TT T +DSD + HRN
Sbjct: 44 ---------------FLNLPTTL---------TTADSDLAPP-------------HRNGD 66
Query: 118 DVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYK 177
+ + D P S + +++ SE ++ N E ++ G G +W++A YK
Sbjct: 67 NSVADTNPRWLSFHSEMQNTG--EVRSEVIDGV--NADGETIL---GVVGGEDWRSASYK 119
Query: 178 AEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDK 237
A IL HP+YEQLL+AHVACLR+ATPVDQ+PRIDAQL+Q V +KYS LG +V D+K
Sbjct: 120 AAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLG----VVVDNK 175
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSD 297
ELD FM+HYV+LLCSFKEQLQ HV VHAMEA+ ACWEIEQSLQSLTGVSP E G TMSD
Sbjct: 176 ELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSESNGKTMSD 235
Query: 298 DDED-QVDSDANLFDGSLEGPDT-MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
D++D QV+S+ N+FDGSL+G D MGFGPL+PTE ERSLMERV++ELKHELKQG+KEKIV
Sbjct: 236 DEDDNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELKQGFKEKIV 295
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
DIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPT
Sbjct: 296 DIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
>gi|168199344|gb|ABZ10962.1| class 1 knox protein [Kalanchoe x houghtonii]
Length = 412
Score = 384 bits (986), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/234 (76%), Positives = 209/234 (89%), Gaps = 4/234 (1%)
Query: 159 VVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQH 218
+V E G GV+NW+ AR+KAEILSHPLYEQLL+AHV+CLRIATPVD+LP+I+AQLAQS +
Sbjct: 124 IVSEYG--GVINWEKARFKAEILSHPLYEQLLAAHVSCLRIATPVDKLPQIEAQLAQSHN 181
Query: 219 VVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQS 278
+V+KY+ A QG DD+ELDQFMT YVLLL SFKEQLQQHVRVHAMEAVMACWE+EQ+
Sbjct: 182 LVAKYA--DAVQGSCVDDEELDQFMTQYVLLLNSFKEQLQQHVRVHAMEAVMACWELEQA 239
Query: 279 LQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERV 338
LQ+LTGVSPGEGTGATMSDD++ + + + N+F+G + D MGFGPL+PT+SERSLMERV
Sbjct: 240 LQNLTGVSPGEGTGATMSDDEDYRAEGELNMFEGGTDCSDNMGFGPLVPTDSERSLMERV 299
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RQELKHELKQGYK+KIVDIREEILRKRRAGKLPGDTTS LK+WW+SHSKWPYPT
Sbjct: 300 RQELKHELKQGYKDKIVDIREEILRKRRAGKLPGDTTSHLKAWWRSHSKWPYPT 353
>gi|163838594|dbj|BAF95776.1| class 2 knotted1-like protein [Nicotiana tabacum]
Length = 391
Score = 382 bits (982), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/222 (85%), Positives = 207/222 (93%), Gaps = 1/222 (0%)
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
W+ + KA+IL+HPLY+QLLSAHV+CLRIATPVDQLPRIDAQLAQSQ+VV+KYS LG GQ
Sbjct: 125 WEREKCKADILNHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLAQSQNVVAKYSVLGQGQ 184
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
L+ DDK+LDQFMTHYVLLL SFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGV+PGEG
Sbjct: 185 PLL-DDKDLDQFMTHYVLLLSSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVAPGEG 243
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TGATMSDDD+DQ DSD N +G +G D+MGFGPL+PTESERSLMERVRQELKHELKQGY
Sbjct: 244 TGATMSDDDDDQADSDTNFLEGGFDGSDSMGFGPLVPTESERSLMERVRQELKHELKQGY 303
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 304 KEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 345
>gi|255565117|ref|XP_002523551.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223537258|gb|EEF38890.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 374
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/229 (83%), Positives = 208/229 (90%), Gaps = 2/229 (0%)
Query: 164 GADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKY 223
G++ NW+ A+ KAEIL HPLYEQLL+AHVACLRIATPVDQL RID QLAQSQ VV+KY
Sbjct: 65 GSEDNNNWERAKSKAEILGHPLYEQLLAAHVACLRIATPVDQLARIDTQLAQSQEVVAKY 124
Query: 224 SALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
S LG GQ V D+KELDQFMTHYVLLLCSFK+QLQQHVRVHAMEAVMACWE+EQSLQSLT
Sbjct: 125 SVLGNGQ--VIDEKELDQFMTHYVLLLCSFKDQLQQHVRVHAMEAVMACWELEQSLQSLT 182
Query: 284 GVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
G S GEGTGATMSDDD+DQ DSDANL+DGSLEG D MGFGPL+PTE+ERSLME VR+ELK
Sbjct: 183 GASLGEGTGATMSDDDDDQADSDANLYDGSLEGLDCMGFGPLVPTETERSLMEHVRKELK 242
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
HELKQ YKEKIVDIREEILRKRRAGKLPGDTTS+LK+WWQSH+KWPYPT
Sbjct: 243 HELKQDYKEKIVDIREEILRKRRAGKLPGDTTSLLKAWWQSHAKWPYPT 291
>gi|297802824|ref|XP_002869296.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
lyrata]
gi|297315132|gb|EFH45555.1| hypothetical protein ARALYDRAFT_328525 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 209/405 (51%), Positives = 256/405 (63%), Gaps = 86/405 (21%)
Query: 1 MAFHHNHL---SQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLR 57
M+F+ +HL +DLPL HF DQ QQ PP Q+H S+ T +
Sbjct: 1 MSFNSSHLLPPQEDLPLRHFADQSQQ-------PPSQRHFSETPSLVTAS---------- 43
Query: 58 SQQAQQQAAHFSDTNFLNLRTTANNNNS-------NNNNTASDSDASQTPNQWLS-RTSS 109
FLNL +T +S N +N+ +D++ +WLS T
Sbjct: 44 ---------------FLNLPSTITTADSDLAPPHRNGDNSVADTNP-----RWLSFHTEM 83
Query: 110 SLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVV 169
S+VID V ++I+ V D
Sbjct: 84 QNTGEVRSEVIDGVNADGETILGVVGGED------------------------------- 112
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
W++A YKA IL HP+YEQLL+AHVACLR+ATPVDQ+PRIDAQL+Q V +KYS LG
Sbjct: 113 -WRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTLG-- 169
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
+V D+KELD FM+HYV+LLCSFKEQLQ HV VHAMEA+ ACWEIEQSLQSLTGVSP E
Sbjct: 170 --VVVDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSLTGVSPSE 227
Query: 290 GTGATMSDDDED-QVDSDANLFDGSLEGPDT-MGFGPLIPTESERSLMERVRQELKHELK 347
G TMS+D++D QV+S+ N++DGSL+G D MGFGPL+PTE ERSLMERV++ELKHELK
Sbjct: 228 SNGKTMSEDEDDNQVESEVNMYDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHELK 287
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
QG+KEKIVDIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPT
Sbjct: 288 QGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 332
>gi|221272018|sp|Q0J6N4.2|KNOSD_ORYSJ RecName: Full=Homeobox protein knotted-1-like 13; AltName:
Full=Homeobox protein OSH45
gi|1805618|dbj|BAA08553.1| OSH45 [Oryza sativa Japonica Group]
Length = 374
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 199/218 (91%), Gaps = 3/218 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KAEIL+HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ VV+KYSAL A
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAA-AGD 165
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D +ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGAT
Sbjct: 166 DGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGAT 225
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSD ++DQ DS+AN++D SL+G D MGFG +PTESERSLMERVRQELKHELKQGYKEK+
Sbjct: 226 MSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKL 283
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+DIREEILRKRRAGKLPGDTTS LK+WWQSH+KWPYPT
Sbjct: 284 IDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 321
>gi|388500714|gb|AFK38423.1| unknown [Medicago truncatula]
Length = 342
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/227 (78%), Positives = 202/227 (88%), Gaps = 5/227 (2%)
Query: 176 YKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD 235
YKAEIL HPLY+QLLSAHV+CLRIATPVDQLPRIDAQL Q+Q V+ KYS++G G D
Sbjct: 70 YKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQAQRVLQKYSSVGIGN---MD 126
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
KELD FMTHYVLLLC+FKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVS GEGTGATM
Sbjct: 127 PKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSSGEGTGATM 186
Query: 296 SDDDEDQVDSDANLFD--GSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
SDD+++Q +S+A L++ SL+G DT+GFGPL+PTE+ERSLMERVR ELKHELKQGYKEK
Sbjct: 187 SDDEDEQAESNARLYNEGSSLDGVDTLGFGPLVPTETERSLMERVRLELKHELKQGYKEK 246
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLLL 400
IVD+REEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT T L+
Sbjct: 247 IVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPTEEDKTRLV 293
>gi|1805617|dbj|BAA08552.1| OSH45 [Oryza sativa Japonica Group]
Length = 375
Score = 376 bits (966), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/218 (83%), Positives = 199/218 (91%), Gaps = 3/218 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KAEIL+HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ VV+KYSAL A
Sbjct: 107 RCKAEILAHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQGVVAKYSALAAAA-AGD 165
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D +ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGAT
Sbjct: 166 DGRELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGAT 225
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSD ++DQ DS+AN++D SL+G D MGFG +PTESERSLMERVRQELKHELKQGYKEK+
Sbjct: 226 MSDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKL 283
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+DIREEILRKRRAGKLPGDTTS LK+WWQSH+KWPYPT
Sbjct: 284 IDIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 321
>gi|357478479|ref|XP_003609525.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355510580|gb|AES91722.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 332
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/219 (80%), Positives = 199/219 (90%), Gaps = 5/219 (2%)
Query: 176 YKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD 235
YKAEIL HPLY+QLLSAHV+CLRIATPVDQLPRIDAQL Q+Q V+ KYS++G G D
Sbjct: 70 YKAEILGHPLYDQLLSAHVSCLRIATPVDQLPRIDAQLQQAQRVLQKYSSVGIGN---MD 126
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
KELD FMTHYVLLLC+FKEQLQQHVRVHAMEAVMACW++EQSLQSLTGVS GEGTGATM
Sbjct: 127 PKELDHFMTHYVLLLCAFKEQLQQHVRVHAMEAVMACWDLEQSLQSLTGVSSGEGTGATM 186
Query: 296 SDDDEDQVDSDANLFD--GSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
SDD+++Q +S+A L++ SL+G DT+GFGPL+PTE+ERSLMERVR ELKHELKQGYKEK
Sbjct: 187 SDDEDEQAESNARLYNEGSSLDGVDTLGFGPLVPTETERSLMERVRLELKHELKQGYKEK 246
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IVD+REEILRKRRAGKLPGDTTS+LK+WWQSHSKWPYPT
Sbjct: 247 IVDVREEILRKRRAGKLPGDTTSLLKAWWQSHSKWPYPT 285
>gi|126644759|gb|ABO26062.1| KNOPE4 [Prunus persica]
Length = 417
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/272 (71%), Positives = 219/272 (80%), Gaps = 12/272 (4%)
Query: 128 DSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ------NARYKAEIL 181
+S + + D+ + S +N S N+ E SG DG + +AR+KA+++
Sbjct: 105 NSFLHDARNDDVVISPSGKSSNCSGRNRRE----ISGYDGEEEEEDELECESARFKADLV 160
Query: 182 SHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA-GQGLVTDDKELD 240
HPLYEQL+SAHV+CLRIATPVDQLPRID QL QSQ VV KYSAL A G V D+KELD
Sbjct: 161 GHPLYEQLVSAHVSCLRIATPVDQLPRIDEQLVQSQRVVDKYSALRANGDVQVMDEKELD 220
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE 300
FMT+YVLLLCSFKEQLQQHVRVHAMEAV+ACWE++QSLQSLTGVS GEGTGATMSDDD+
Sbjct: 221 LFMTNYVLLLCSFKEQLQQHVRVHAMEAVIACWELDQSLQSLTGVSTGEGTGATMSDDDD 280
Query: 301 DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
N +DGSL+GPDTMGFGPL+PTESERSLMERVRQELKHELKQGYKEKIVDIREE
Sbjct: 281 QVDSD-INSYDGSLDGPDTMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREE 339
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 340 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 371
>gi|289655990|gb|ADD14043.1| class 2 KNOTTED-like transcription factor KNOPE4 [Prunus persica]
Length = 358
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/272 (71%), Positives = 219/272 (80%), Gaps = 12/272 (4%)
Query: 128 DSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQ------NARYKAEIL 181
+S + + D+ + S +N S N+ E SG DG + +AR+KA+++
Sbjct: 46 NSFLHDARNDDVVISPSGKSSNCSGRNRRE----ISGYDGEEEEEDELECESARFKADLV 101
Query: 182 SHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA-GQGLVTDDKELD 240
HPLYEQL+SAHV+CLRIATPVDQLPRID QL QSQ VV KYSAL A G V D+KELD
Sbjct: 102 GHPLYEQLVSAHVSCLRIATPVDQLPRIDEQLVQSQRVVDKYSALRANGDVQVMDEKELD 161
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE 300
FMT+YVLLLCSFKEQLQQHVRVHAMEAV+ACWE++QSLQSLTGVS GEGTGATMSDDD+
Sbjct: 162 LFMTNYVLLLCSFKEQLQQHVRVHAMEAVIACWELDQSLQSLTGVSTGEGTGATMSDDDD 221
Query: 301 DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
N +DGSL+GPDTMGFGPL+PTESERSLMERVRQELKHELKQGYKEKIVDIREE
Sbjct: 222 QVDSD-INSYDGSLDGPDTMGFGPLVPTESERSLMERVRQELKHELKQGYKEKIVDIREE 280
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 281 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 312
>gi|312281601|dbj|BAJ33666.1| unnamed protein product [Thellungiella halophila]
Length = 385
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 208/407 (51%), Positives = 253/407 (62%), Gaps = 87/407 (21%)
Query: 1 MAFHHNHL---SQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLR 57
M+F+ +HL +DLPL HF+DQ Q PPQ+
Sbjct: 1 MSFNSSHLLPPQEDLPLRHFSDQSQH-------PPQR----------------------- 30
Query: 58 SQQAQQQAAHFSDT------NFLNLRTTANNNNSNNNNTA---SDSDASQTPNQWLS-RT 107
HFS+T +FLNL +TA +N DS A+ T +WL +T
Sbjct: 31 ---------HFSETPSLLTASFLNLPSTAATTAESNFAPPLRNGDSSAADTTRRWLYFQT 81
Query: 108 SSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADG 167
+V D V NA+ E ++ +
Sbjct: 82 EIQNTGEGRPEVTDGV-----------------NADGETIHGVVGGDGG----------- 113
Query: 168 VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG 227
+W++A YKA IL HP+YEQLL+AHVACLR+ATPVDQ+PRIDAQL+Q V +KYS L
Sbjct: 114 -EDWRSASYKAAILRHPMYEQLLAAHVACLRVATPVDQIPRIDAQLSQLHTVAAKYSTL- 171
Query: 228 AGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP 287
G+V D+KELD FM+HYV+LLCSFKEQLQ HV VHAMEA+ ACWEIEQSLQS+TGVSP
Sbjct: 172 ---GVVEDNKELDHFMSHYVVLLCSFKEQLQHHVCVHAMEAITACWEIEQSLQSITGVSP 228
Query: 288 GEGTGATMSDD-DEDQVDSDANLFDGSLEGPDT-MGFGPLIPTESERSLMERVRQELKHE 345
E G TMSDD D +QV+S+ N+FDGSL+G D MGFGPL+PTE ERSLMERV++ELKHE
Sbjct: 229 SENNGKTMSDDEDGNQVESEVNMFDGSLDGSDCLMGFGPLVPTERERSLMERVKKELKHE 288
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LKQG+KEKI DIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPT
Sbjct: 289 LKQGFKEKIEDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 335
>gi|302398851|gb|ADL36720.1| HD domain class transcription factor [Malus x domestica]
Length = 371
Score = 366 bits (939), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 182/221 (82%), Positives = 197/221 (89%), Gaps = 2/221 (0%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA-GQG 231
+AR+KA+I+ HPLYEQL+SAHV+ LRI TPVDQLPRID +L QSQ VV YSAL A G
Sbjct: 95 SARFKADIVGHPLYEQLVSAHVSSLRIPTPVDQLPRIDEKLLQSQRVVDNYSALRANGDV 154
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
V D+KELD FMT+YVLLLCSFKEQLQQHVRVHAMEAVMACWE++QSLQSLTGVS GEGT
Sbjct: 155 GVMDEKELDLFMTNYVLLLCSFKEQLQQHVRVHAMEAVMACWELDQSLQSLTGVSTGEGT 214
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDDD+ N +DGSL+GPDTMGFGPL+PTESERSLMERVRQELKHELKQGYK
Sbjct: 215 GATMSDDDDQLDSD-INSYDGSLDGPDTMGFGPLVPTESERSLMERVRQELKHELKQGYK 273
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT
Sbjct: 274 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 314
>gi|11463943|dbj|BAB18585.1| CRKNOX3 [Ceratopteris richardii]
Length = 436
Score = 358 bits (920), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/228 (74%), Positives = 200/228 (87%), Gaps = 1/228 (0%)
Query: 166 DGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA 225
D V WQNAR KA+I HPLY+QLL+AHVACLRIATPVDQLPRIDAQ+AQ+ +V+KY+
Sbjct: 163 DSQVLWQNARLKADITMHPLYDQLLAAHVACLRIATPVDQLPRIDAQIAQASQIVAKYAV 222
Query: 226 LGAGQGLVTDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
LG LV ++K ELDQFM HYVLLLC+FKEQLQQHV+VHAMEAVMACWE+EQSL +LTG
Sbjct: 223 LGQNNLLVGEEKDELDQFMAHYVLLLCTFKEQLQQHVKVHAMEAVMACWELEQSLLTLTG 282
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
VSPGEGTGATMSDDD+D +SD +++D + + D+ FGPLIPTE+ER+LMERVRQELK+
Sbjct: 283 VSPGEGTGATMSDDDDDPAESDPSIYDPAFDTHDSGAFGPLIPTETERTLMERVRQELKN 342
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK GYK++IVD+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYPT
Sbjct: 343 ELKNGYKDRIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 390
>gi|302784286|ref|XP_002973915.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300158247|gb|EFJ24870.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 287
Score = 350 bits (898), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 163/224 (72%), Positives = 192/224 (85%), Gaps = 2/224 (0%)
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG- 229
WQ+AR KA++++HPLYEQLLSAH++CLR ATPVDQLP+IDAQLA S V +KYS L A
Sbjct: 18 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILAANE 77
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
QGL D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACWE+EQSL +LTGVSPGE
Sbjct: 78 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGVSPGE 137
Query: 290 GTGATMSDDDEDQ-VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GTGATMS+D++DQ DSD+ +D ++G D GFGPLIPTE+ER+LMERVR ELK ELKQ
Sbjct: 138 GTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHELKIELKQ 197
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
GYK KI D+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYP+
Sbjct: 198 GYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 241
>gi|302771457|ref|XP_002969147.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300163652|gb|EFJ30263.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 287
Score = 348 bits (894), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 162/224 (72%), Positives = 191/224 (85%), Gaps = 2/224 (0%)
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG- 229
WQ+AR KA++++HPLYEQLLSAH++CLR ATPVDQLP+IDAQLA S V +KYS L
Sbjct: 18 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILATNE 77
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
QGL D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACWE+EQSL +LTGVSPGE
Sbjct: 78 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGVSPGE 137
Query: 290 GTGATMSDDDEDQ-VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GTGATMS+D++DQ DSD+ +D ++G D GFGPLIPTE+ER+LMERVR ELK ELKQ
Sbjct: 138 GTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHELKIELKQ 197
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
GYK KI D+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYP+
Sbjct: 198 GYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 241
>gi|294461542|gb|ADE76332.1| unknown [Picea sitchensis]
Length = 354
Score = 347 bits (890), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 181/258 (70%), Positives = 205/258 (79%), Gaps = 3/258 (1%)
Query: 136 SADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVA 195
SAD N+N E +N S + E D WQ+AR KA+I+SHPLY+QLLSAH+
Sbjct: 53 SADAVNSNREPVN--SGGAGRDRDGGEEADDHAALWQSARIKADIVSHPLYDQLLSAHLE 110
Query: 196 CLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKE 255
CLRIATP DQ RIDAQLAQSQHVV+KYS LG LV+D KELDQFMT YVLLLCSFKE
Sbjct: 111 CLRIATPKDQHSRIDAQLAQSQHVVTKYSVLGNDNILVSDKKELDQFMTQYVLLLCSFKE 170
Query: 256 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLE 315
QLQ HV VH MEAV AC +++ SL +LTGVSPGEGTGATMSDD++D DSD +L+DG L+
Sbjct: 171 QLQYHVHVHVMEAVRACIDLQHSLLTLTGVSPGEGTGATMSDDEDDNADSDTDLYDGGLD 230
Query: 316 GP-DTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDT 374
G D +G GPLIPTESERSLMERVRQELK +LKQGY+ KI D+REEILRKRRAGKLPGDT
Sbjct: 231 GGQDMVGLGPLIPTESERSLMERVRQELKVDLKQGYRAKIADVREEILRKRRAGKLPGDT 290
Query: 375 TSVLKSWWQSHSKWPYPT 392
TS LK+WWQSHSKWPYPT
Sbjct: 291 TSRLKAWWQSHSKWPYPT 308
>gi|413954622|gb|AFW87271.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 316
Score = 343 bits (881), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 189/218 (86%), Gaps = 1/218 (0%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A + +A A G +
Sbjct: 42 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPMEAAAAAAAAGGAHS 101
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGAT
Sbjct: 102 GGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGAT 161
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS++N+FDG+ EG D MGFGPL+ TE ERSL+ERVRQELKHELKQGY++K+
Sbjct: 162 MSDDEDNQVDSESNMFDGN-EGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYRDKL 220
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPT
Sbjct: 221 VDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 258
>gi|242060764|ref|XP_002451671.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
gi|241931502|gb|EES04647.1| hypothetical protein SORBIDRAFT_04g005620 [Sorghum bicolor]
Length = 444
Score = 343 bits (879), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 169/226 (74%), Positives = 191/226 (84%), Gaps = 4/226 (1%)
Query: 167 GVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
GVV R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +
Sbjct: 40 GVVG--GEREKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGA 97
Query: 227 GAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 286
A G + ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG S
Sbjct: 98 AAAGGPSGGE-ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGAS 156
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
PGEGTGATMSDD+++QVDS+AN+FDG+ +G D MGFGPLI TE ERSL+ERVRQELK+EL
Sbjct: 157 PGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRQELKNEL 215
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KQGYKEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 216 KQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 261
>gi|413935911|gb|AFW70462.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 310
Score = 340 bits (871), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 188/218 (86%), Gaps = 2/218 (0%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ + A G
Sbjct: 40 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSG 99
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGAT
Sbjct: 100 GE-ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGAT 158
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELK+ELKQGYKEK+
Sbjct: 159 MSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKNELKQGYKEKL 217
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 218 VDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 255
>gi|293334789|ref|NP_001169973.1| putative knotted-like transcription factor family protein [Zea
mays]
gi|224032663|gb|ACN35407.1| unknown [Zea mays]
gi|413935912|gb|AFW70463.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 300
Score = 339 bits (870), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 188/218 (86%), Gaps = 2/218 (0%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ + A G
Sbjct: 40 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSG 99
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGAT
Sbjct: 100 GE-ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGAT 158
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELK+ELKQGYKEK+
Sbjct: 159 MSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKNELKQGYKEKL 217
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 218 VDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 255
>gi|195619568|gb|ACG31614.1| homeobox protein knotted-1-like 3 [Zea mays]
Length = 298
Score = 338 bits (867), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 164/218 (75%), Positives = 187/218 (85%), Gaps = 2/218 (0%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ + A G
Sbjct: 38 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGGPSG 97
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTG T
Sbjct: 98 GE-ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGGT 156
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+AN+FDG+ +G D MGFGPLI TE ERSL+ERVR+ELK+ELKQGYKEK+
Sbjct: 157 MSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGYKEKL 215
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 216 VDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 253
>gi|221272028|sp|Q0E3C3.2|KNOS2_ORYSJ RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=Homeobox protein HOS58
gi|215769326|dbj|BAH01555.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 313
Score = 338 bits (866), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 188/218 (86%), Gaps = 2/218 (0%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA + +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ SA A G
Sbjct: 41 REKAAVAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAASAAAAAGGPSG 100
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGAT
Sbjct: 101 GE-ELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGAT 159
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+
Sbjct: 160 MSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKL 218
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEILRKRRAGKLPGDT S+LK+WWQ+HSKWPYPT
Sbjct: 219 VDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 256
>gi|413926367|gb|AFW66299.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 363
Score = 337 bits (864), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ + A
Sbjct: 98 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAA 157
Query: 235 DD----KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEG
Sbjct: 158 GGPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 217
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TG TMSDD+++QVDS+AN+FDG+ +G D MGFGPLI TE ERSL+ERVR+ELK+ELKQGY
Sbjct: 218 TGGTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGY 276
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 277 KEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 318
>gi|162458143|ref|NP_001105852.1| KNOX family class 2 homeodomain protein [Zea mays]
gi|126153888|emb|CAJ58046.2| KNOX family class 2 homeodomain protein [Zea mays]
Length = 304
Score = 336 bits (862), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ + A
Sbjct: 39 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAA 98
Query: 235 DD----KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEG
Sbjct: 99 GGPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 158
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TG TMSDD+++QVDS+AN+FDG+ +G D MGFGPLI TE ERSL+ERVR+ELK+ELKQGY
Sbjct: 159 TGGTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGY 217
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 218 KEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 259
>gi|218198650|gb|EEC81077.1| hypothetical protein OsI_23897 [Oryza sativa Indica Group]
Length = 323
Score = 335 bits (860), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/221 (73%), Positives = 188/221 (85%), Gaps = 4/221 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +A A
Sbjct: 46 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGG 105
Query: 235 DD---KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEG+
Sbjct: 106 APSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGS 165
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QVDS++N+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELKHELKQGY+
Sbjct: 166 GATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYR 224
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EK+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPT
Sbjct: 225 EKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>gi|413926368|gb|AFW66300.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 328
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 163/222 (73%), Positives = 186/222 (83%), Gaps = 5/222 (2%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ + A
Sbjct: 38 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAAAGAAAAGAAAA 97
Query: 235 DD----KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEG
Sbjct: 98 GGPSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEG 157
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
TG TMSDD+++QVDS+AN+FDG+ +G D MGFGPLI TE ERSL+ERVR+ELK+ELKQGY
Sbjct: 158 TGGTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLILTEGERSLVERVRKELKNELKQGY 216
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 217 KEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 258
>gi|302784284|ref|XP_002973914.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
gi|300158246|gb|EFJ24869.1| hypothetical protein SELMODRAFT_173857 [Selaginella moellendorffii]
Length = 363
Score = 334 bits (857), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 160/230 (69%), Positives = 189/230 (82%), Gaps = 8/230 (3%)
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG- 229
WQ+AR KA++++HPLYEQLLSAH++CLR ATPVDQLP+IDAQLA S V +KYS L A
Sbjct: 88 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILAANE 147
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV---- 285
QGL D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACWE+EQSL +LTG
Sbjct: 148 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGKHNFT 207
Query: 286 --SPGEGTGATMSDDDEDQ-VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQEL 342
S EGTGATMS+D++DQ DSD+ +D ++G D GFGPLIPTE+ER+LMERVR EL
Sbjct: 208 SRSKREGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHEL 267
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K ELKQGYK KI D+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYP+
Sbjct: 268 KIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 317
>gi|302771459|ref|XP_002969148.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
gi|300163653|gb|EFJ30264.1| hypothetical protein SELMODRAFT_451277 [Selaginella moellendorffii]
Length = 293
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 159/230 (69%), Positives = 188/230 (81%), Gaps = 8/230 (3%)
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG- 229
WQ+AR KA++++HPLYEQLLSAH++CLR ATPVDQLP+IDAQLA S V +KYS L
Sbjct: 18 WQSARLKADLVTHPLYEQLLSAHISCLRTATPVDQLPKIDAQLAHSSQVAAKYSILATNE 77
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV---- 285
QGL D E+++FM HYV LL SFK+QLQQHVRVHAMEAV+ACWE+EQSL +LTG
Sbjct: 78 QGLSKDKDEVNEFMAHYVTLLRSFKDQLQQHVRVHAMEAVVACWELEQSLFTLTGKHNFT 137
Query: 286 --SPGEGTGATMSDDDEDQ-VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQEL 342
S EGTGATMS+D++DQ DSD+ +D ++G D GFGPLIPTE+ER+LMERVR EL
Sbjct: 138 SRSKREGTGATMSEDEDDQQADSDSGYYDAGMDGHDFTGFGPLIPTETERTLMERVRHEL 197
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K ELKQGYK KI D+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYP+
Sbjct: 198 KIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKTWWHAHSKWPYPS 247
>gi|357138416|ref|XP_003570788.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
distachyon]
Length = 304
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 161/218 (73%), Positives = 182/218 (83%), Gaps = 4/218 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A + + +
Sbjct: 45 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLVAAAGSAG---GPS 101
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGAT
Sbjct: 102 GGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGAT 161
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+ NLFDG+ +G D MGFGPLI TE ERSL+ERVR ELK ELKQGYKEK+
Sbjct: 162 MSDDEDNQVDSETNLFDGN-DGSDGMGFGPLILTEGERSLIERVRHELKSELKQGYKEKL 220
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEI+RKRRAGKLPGDT + LK+WWQ+HSKWPYPT
Sbjct: 221 VDIREEIMRKRRAGKLPGDTAATLKAWWQAHSKWPYPT 258
>gi|357123228|ref|XP_003563314.1| PREDICTED: homeobox protein knotted-1-like 2-like [Brachypodium
distachyon]
Length = 317
Score = 334 bits (856), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 184/218 (84%), Gaps = 6/218 (2%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA + +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A A G
Sbjct: 48 REKAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPAPVPPAAAHSGG--- 104
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGAT
Sbjct: 105 --EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGAT 162
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++ +D+++N+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELKHELKQGY+EK+
Sbjct: 163 MSDDEDNPIDTESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKL 221
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+DIREEILRKRRAGKLPGDT S LK+WWQ+H+KWPYPT
Sbjct: 222 IDIREEILRKRRAGKLPGDTASTLKAWWQAHAKWPYPT 259
>gi|221272019|sp|Q94LW4.2|KNOSB_ORYSJ RecName: Full=Homeobox protein knotted-1-like 11; AltName:
Full=Homeobox protein HOS59
gi|215768803|dbj|BAH01032.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 332 bits (852), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 187/221 (84%), Gaps = 4/221 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +A A
Sbjct: 46 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGG 105
Query: 235 DD---KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SP EG+
Sbjct: 106 APSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGS 165
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QVDS++N+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELKHELKQGY+
Sbjct: 166 GATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYR 224
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EK+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPT
Sbjct: 225 EKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>gi|115469202|ref|NP_001058200.1| Os06g0646600 [Oryza sativa Japonica Group]
gi|14149139|dbj|BAB55659.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|51535417|dbj|BAD37316.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|51535639|dbj|BAD37613.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|113596240|dbj|BAF20114.1| Os06g0646600 [Oryza sativa Japonica Group]
Length = 317
Score = 332 bits (850), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 162/221 (73%), Positives = 187/221 (84%), Gaps = 4/221 (1%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA I +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +A A
Sbjct: 46 REKAAIAAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARPPPLAAATAAAAAAAAGG 105
Query: 235 DD---KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SP EG+
Sbjct: 106 APSGGEELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGS 165
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+++QVDS++N+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELKHELKQGY+
Sbjct: 166 GATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYR 224
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EK+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPT
Sbjct: 225 EKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 265
>gi|296082096|emb|CBI21101.3| unnamed protein product [Vitis vinifera]
Length = 219
Score = 330 bits (847), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 151/161 (93%), Positives = 159/161 (98%)
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
++ D+KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT
Sbjct: 1 MLGDEKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 60
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD+EDQ+DSDANLFDGSLEG D+MGFGPL+PTESERSLMERVRQELKHELKQGYK
Sbjct: 61 GATMSDDEEDQIDSDANLFDGSLEGADSMGFGPLVPTESERSLMERVRQELKHELKQGYK 120
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
EKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSHSKWPYPT
Sbjct: 121 EKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSHSKWPYPT 161
>gi|356514089|ref|XP_003525739.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 293
Score = 324 bits (831), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 153/216 (70%), Positives = 180/216 (83%), Gaps = 1/216 (0%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KAEI +HPLYEQLLSAHV+CLR+ATP+DQLP ID QL+QS H++ Y++ + D
Sbjct: 29 KAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDGQLSQSHHLLRSYASHHSHSLSPHDR 88
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD FM Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEGTGATMS
Sbjct: 89 QELDNFMAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIESTLQALTGVSLGEGTGATMS 148
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD ED + D +L S EG D MGFGPL+PTESERSLMERVRQELK ELKQG+K +I D
Sbjct: 149 DD-EDDLQMDGSLDQSSAEGHDLMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIED 207
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+REEILRKRRAGKLPGDTTSVLK+WWQ H+KWPYPT
Sbjct: 208 VREEILRKRRAGKLPGDTTSVLKAWWQQHAKWPYPT 243
>gi|326534150|dbj|BAJ89425.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 297
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/216 (72%), Positives = 182/216 (84%), Gaps = 9/216 (4%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA + +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +G
Sbjct: 45 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARAPPPMPPASALSG------G 98
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGATMS
Sbjct: 99 EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMS 158
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD+++ VDS++N+FDG+ + D MGFG L TE ERSL+ERVRQELKHELKQGY+EK+VD
Sbjct: 159 DDEDNPVDSESNMFDGN-DVSDGMGFGML--TEGERSLVERVRQELKHELKQGYREKLVD 215
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IREEILRKRRAGKLPGDT S LK+WWQ+H+KWPYPT
Sbjct: 216 IREEILRKRRAGKLPGDTASTLKAWWQAHAKWPYPT 251
>gi|33333542|gb|AAQ11887.1| knotted 7 [Hordeum vulgare]
Length = 340
Score = 323 bits (828), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 157/216 (72%), Positives = 182/216 (84%), Gaps = 9/216 (4%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA + +HPLYE+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +G
Sbjct: 46 KAAVEAHPLYERLLEAHVACLRVATPVDQLPRIDAQIAARAPPPMPPASALSG------G 99
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGATMS
Sbjct: 100 EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMS 159
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD+++ VDS++N+FDG+ + D MGFG L TE ERSL+ERVRQELKHELKQGY+EK+VD
Sbjct: 160 DDEDNPVDSESNMFDGN-DVSDGMGFGML--TEGERSLVERVRQELKHELKQGYREKLVD 216
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IREEILRKRRAGKLPGDT S LK+WWQ+H+KWPYPT
Sbjct: 217 IREEILRKRRAGKLPGDTASTLKAWWQAHAKWPYPT 252
>gi|58011289|gb|AAW62519.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 363
Score = 321 bits (823), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 159/246 (64%), Positives = 194/246 (78%), Gaps = 12/246 (4%)
Query: 153 NNKSE-GVVVESG--ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRI 209
++K+E G+ V SG + Q+A+ KA+I++HPLYEQLL AHV+CLRIATPVDQL +I
Sbjct: 76 DDKAEHGLGVGSGDMVEECARMQSAKLKADIVTHPLYEQLLEAHVSCLRIATPVDQLGKI 135
Query: 210 DAQLAQSQHVVSKYSALGAGQGLVTDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEA 268
D Q+AQ +++KY L Q L + K ELDQFM HYV+LL SFK+QLQ HVRVHA EA
Sbjct: 136 DGQIAQCHQLIAKYYILANHQLLCGNSKDELDQFMAHYVMLLRSFKDQLQHHVRVHAKEA 195
Query: 269 VMACWEIEQSLQSLTGVSPGEGTGATMSDDD--EDQVDSDANLFDGSLEGPDTMGFGPLI 326
VMACWE+EQSL LTGVSPGEG+GATMSDD+ E + +++L+ D +GFGPLI
Sbjct: 196 VMACWELEQSLLGLTGVSPGEGSGATMSDDETTEQEQQCESDLWQ------DNLGFGPLI 249
Query: 327 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHS 386
PTE+ER+LMERVRQELKHELK GY+ +IVD+R EILRKRRAGKLPGDTTSVLK+WW +HS
Sbjct: 250 PTETERTLMERVRQELKHELKHGYRARIVDVRXEILRKRRAGKLPGDTTSVLKAWWHAHS 309
Query: 387 KWPYPT 392
KWPYPT
Sbjct: 310 KWPYPT 315
>gi|168040482|ref|XP_001772723.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
gi|162675948|gb|EDQ62437.1| KNOX class 2 protein MKN1-3 [Physcomitrella patens subsp. patens]
Length = 533
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/395 (45%), Positives = 234/395 (59%), Gaps = 49/395 (12%)
Query: 40 QQSIETTAPNWLNSALLRSQ-QAQQQAAHFSDTNFLNLRTTANNNNSNNNNT------AS 92
+ I WLNSALLR Q QA + + + D N + + + + A
Sbjct: 99 EDGIVKNGRTWLNSALLREQNQASEDRSGYGDHNAAERWCPVCSASGSQSCMCGMPMHAG 158
Query: 93 DSDASQTPNQ-----WLSRTSSSLL---HRNHSDVIDDVTPANDSIIAAVESADLKNANS 144
DS PNQ WLS +++L HR +V D A V K A
Sbjct: 159 DSSTISFPNQSTYTHWLSMQGANMLASQHRTGGEV--DAKAAG----FTVSPQSTKMATE 212
Query: 145 ENMNNASTNNKSEGVVVE-------------------------SGADGVVNWQNARYKAE 179
N++ A + + + GA + W+ AR K
Sbjct: 213 LNLSPAGHGRDNHALFTDPRHSVAQGGSRYAEDYERTEHQTDWEGATQKMEWEQARDKFL 272
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDK-- 237
I++HPLY LL+AH +CLR+ TPVDQLP I+AQL Q++HV SKYS L +T+D+
Sbjct: 273 IVAHPLYPDLLNAHASCLRVGTPVDQLPHIEAQLTQARHVTSKYSVLHPDHLEITEDEKT 332
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSD 297
ELDQFM Y++LLCSFK+ LQQHV EA+M+CWE+EQ+L +LTGVS GE TGATMS+
Sbjct: 333 ELDQFMAQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTGVSAGESTGATMSE 392
Query: 298 DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI 357
+DED DSD +D ++ D+ GFGPL+PTESER+LMERVRQELK+ELKQGY+ +IVD+
Sbjct: 393 EDED-YDSDYGAYDAHMDPQDSGGFGPLVPTESERTLMERVRQELKYELKQGYRARIVDV 451
Query: 358 REEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
REEILRKRRAGKLP TT+VLK+WWQ+HSKWPYPT
Sbjct: 452 REEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPT 486
>gi|14348597|gb|AAK61309.1|AF285148_1 class 2 KNOTTED1-like protein MKN1-3 [Physcomitrella patens]
Length = 533
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 181/395 (45%), Positives = 234/395 (59%), Gaps = 49/395 (12%)
Query: 40 QQSIETTAPNWLNSALLRSQ-QAQQQAAHFSDTNFLNLRTTANNNNSNNNNT------AS 92
+ I WLNSALLR Q QA + + + D N + + + + A
Sbjct: 99 EDGIVKNGRTWLNSALLREQNQASEDRSGYGDHNAAERWCPVCSASGSQSCMCGMPMHAG 158
Query: 93 DSDASQTPNQ-----WLSRTSSSLL---HRNHSDVIDDVTPANDSIIAAVESADLKNANS 144
DS PNQ WLS +++L HR +V D A V K A
Sbjct: 159 DSSTISFPNQSTYTHWLSMQGANMLASQHRTGGEV--DAKAAG----FTVSPQSTKMATE 212
Query: 145 ENMNNASTNNKSEGVVVE-------------------------SGADGVVNWQNARYKAE 179
N++ A + + + GA + W+ AR K
Sbjct: 213 LNLSPAGHGRDNHALFTDPRHSVAQGGSRYAEDYERTEHQTDWEGATQKMEWEQARDKFL 272
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDK-- 237
I++HPLY LL+AH +CLR+ TPVDQLP I+AQL Q++HV SKYS L +T+D+
Sbjct: 273 IVAHPLYPDLLNAHASCLRVGTPVDQLPHIEAQLTQARHVTSKYSVLHPDHLEITEDEKT 332
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSD 297
ELDQFM Y++LLCSFK+ LQQHV EA+M+CWE+EQ+L +LTGVS GE TGATMS+
Sbjct: 333 ELDQFMAQYIMLLCSFKDHLQQHVYYDVTEAMMSCWELEQALHNLTGVSAGESTGATMSE 392
Query: 298 DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI 357
+DED DSD +D ++ D+ GFGPL+PTESER+LMERVRQELK+ELKQGY+ +IVD+
Sbjct: 393 EDED-YDSDYGAYDAHMDPQDSGGFGPLVPTESERTLMERVRQELKYELKQGYRARIVDV 451
Query: 358 REEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
REEILRKRRAGKLP TT+VLK+WWQ+HSKWPYPT
Sbjct: 452 REEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPT 486
>gi|363806766|ref|NP_001242278.1| uncharacterized protein LOC100782179 [Glycine max]
gi|255635799|gb|ACU18248.1| unknown [Glycine max]
Length = 292
Score = 319 bits (817), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 179/216 (82%), Gaps = 1/216 (0%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KAEI +HPLYEQLLSAHV+CLR+ATP+DQLP ID QL+QS H++ Y++ + D
Sbjct: 28 KAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDGQLSQSHHLLRSYASHHSHSLSPHDR 87
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD FM Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEGTGATMS
Sbjct: 88 QELDNFMAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIESTLQALTGVSLGEGTGATMS 147
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD ED + + +L S +G D MGFGPL+PTESERSLMERVRQELK ELKQG+K +I D
Sbjct: 148 DD-EDDLQMNGSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQGFKSRIED 206
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+REEILRKRRAGKLPG TTSVLK+WWQ H+KWPYPT
Sbjct: 207 VREEILRKRRAGKLPGATTSVLKAWWQQHAKWPYPT 242
>gi|449452384|ref|XP_004143939.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
gi|449495874|ref|XP_004159970.1| PREDICTED: homeobox protein knotted-1-like 7-like [Cucumis sativus]
Length = 301
Score = 318 bits (815), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 157/237 (66%), Positives = 186/237 (78%), Gaps = 9/237 (3%)
Query: 161 VESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
V +GV N++ KAEI +HPLYEQLLSAHVACLR+ATP+DQLP IDAQL+QS H++
Sbjct: 23 VSVSGEGV---HNSQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPMIDAQLSQSHHIL 79
Query: 221 SKYSA-----LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 275
Y++ A + +ELD F+ Y+++LCSFKEQLQQHVRVHA+EAVMAC EI
Sbjct: 80 RSYASSQQHHQNAHSLTPHERQELDNFLAQYMIVLCSFKEQLQQHVRVHAVEAVMACREI 139
Query: 276 EQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
E +LQ+LTGVS GEGTGATMSDD ED + D +L + D MGFGPL+PTESERSLM
Sbjct: 140 ENTLQALTGVSLGEGTGATMSDD-EDDIPMDFSLDQSGADAHDMMGFGPLLPTESERSLM 198
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPT
Sbjct: 199 ERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 255
>gi|356495645|ref|XP_003516685.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 377
Score = 317 bits (813), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 159/242 (65%), Positives = 187/242 (77%), Gaps = 2/242 (0%)
Query: 152 TNNKSEGVVVESGADGVVNWQNAR-YKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID 210
T K E G G V+ + R KAEI +HPLYEQLL+AHVACLR+ATP+DQLP ID
Sbjct: 91 TKGKEEMQEPSLGLMGEVSGDHHRQLKAEITTHPLYEQLLAAHVACLRVATPIDQLPLID 150
Query: 211 AQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVM 270
AQL+QS H++ Y + +ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVM
Sbjct: 151 AQLSQSHHLLRSYVSHNTHSLSPHHRQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVM 210
Query: 271 ACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTES 330
AC +IE +LQ+LTGVS GEGTGATMSDD ED + D +L S EG D MGFGPL+PTES
Sbjct: 211 ACRDIENALQALTGVSLGEGTGATMSDD-EDDLQMDISLDQSSAEGHDMMGFGPLLPTES 269
Query: 331 ERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPY 390
ERSLMERVRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ H+KWPY
Sbjct: 270 ERSLMERVRQELKIELKQGFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPY 329
Query: 391 PT 392
PT
Sbjct: 330 PT 331
>gi|224058619|ref|XP_002299569.1| predicted protein [Populus trichocarpa]
gi|222846827|gb|EEE84374.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 184/224 (82%), Gaps = 4/224 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
Q+ + KAEI +HPLYEQLLSAHV+CLR+ATP+DQLP IDAQL+QS H++ Y++ G
Sbjct: 25 QSRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQHNQHG 84
Query: 232 LVT---DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
+ ++LD F+ Y+++LC+FK+QLQQHVRVHA+EAVMAC EIE +LQ+LTGV+ G
Sbjct: 85 HSLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLG 144
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EGTGATMSDD ED + D +L S +G D MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 145 EGTGATMSDD-EDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQ 203
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
G+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPT
Sbjct: 204 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPT 247
>gi|118481200|gb|ABK92551.1| unknown [Populus trichocarpa]
Length = 301
Score = 316 bits (810), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 152/224 (67%), Positives = 184/224 (82%), Gaps = 4/224 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
Q+ + KAEI +HPLYEQLLSAHV+CLR+ATP+DQLP IDAQL+QS H++ Y++ G
Sbjct: 33 QSRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQHNQHG 92
Query: 232 LVT---DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
+ ++LD F+ Y+++LC+FK+QLQQHVRVHA+EAVMAC EIE +LQ+LTGV+ G
Sbjct: 93 HSLSPHERQDLDNFLAQYLIILCTFKDQLQQHVRVHAVEAVMACREIETTLQALTGVTLG 152
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EGTGATMSDD ED + D +L S +G D MGFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 153 EGTGATMSDD-EDDLQMDFSLDQSSADGHDMMGFGPLLPTESERSLMERVRQELKIELKQ 211
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
G+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPT
Sbjct: 212 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPT 255
>gi|297840209|ref|XP_002887986.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
lyrata]
gi|297333827|gb|EFH64245.1| hypothetical protein ARALYDRAFT_475053 [Arabidopsis lyrata subsp.
lyrata]
Length = 291
Score = 313 bits (803), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 153/235 (65%), Positives = 186/235 (79%), Gaps = 9/235 (3%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG V QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 14 GGDGDAPAVAEQNRQMKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLI 73
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D+ELD F+ Y+++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 74 RSYASTAVGYS--NHDRELDNFLAQYIMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 131
Query: 281 SLTGVSPGEGTGATMSDDDED-QVD--SDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SLTG + GEG+GATMS+D++D Q+D SD + D S G D GFGPL+PTESERSLMER
Sbjct: 132 SLTGATLGEGSGATMSEDEDDIQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMER 190
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 191 VRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>gi|255537235|ref|XP_002509684.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223549583|gb|EEF51071.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 302
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 180/221 (81%), Gaps = 1/221 (0%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
Q + KAEI +HPLYEQLLSAHV+CLR+ATP+DQLP IDAQL+QS H++ Y++
Sbjct: 37 QTRQLKAEIANHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLIRSYASQHPHPL 96
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ +ELD F+ Y+++LCSFK+QLQQHVRVHA+EAVMAC EIE +L +LTGV+ GEGT
Sbjct: 97 SPHERQELDNFLAQYLIVLCSFKDQLQQHVRVHAVEAVMACREIENTLHALTGVTLGEGT 156
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD ED + D +L +G D MGFGPL+PTESERSLMERVRQELK ELKQG+K
Sbjct: 157 GATMSDD-EDDLQMDFSLDQSGADGHDLMGFGPLLPTESERSLMERVRQELKIELKQGFK 215
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPT
Sbjct: 216 SRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 256
>gi|302398831|gb|ADL36710.1| HD domain class transcription factor [Malus x domestica]
Length = 288
Score = 312 bits (800), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/222 (68%), Positives = 181/222 (81%), Gaps = 3/222 (1%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGL 232
N + KAEI +HPLYEQLLSAHV+CLR+ATP+DQLP IDAQL+QS H++ Y++
Sbjct: 22 NRQLKAEIATHPLYEQLLSAHVSCLRVATPIDQLPLIDAQLSQSHHLLRSYASQPQHAQS 81
Query: 233 VT--DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
V+ + +ELD F+ Y+++LCSFKE LQQHVRVHA+EAVMAC EIE +LQ+LTGVS GE
Sbjct: 82 VSPHERQELDNFLAQYLIVLCSFKEHLQQHVRVHAVEAVMACREIESNLQALTGVSLGEV 141
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+GATMSDD ED + D + S EG D MGFGPL+PTESERSLMERVRQELK ELKQG+
Sbjct: 142 SGATMSDD-EDDMPMDFTMDQSSGEGHDMMGFGPLLPTESERSLMERVRQELKIELKQGF 200
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K +I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPT
Sbjct: 201 KSRIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 242
>gi|302822121|ref|XP_002992720.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
gi|302823880|ref|XP_002993588.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
gi|300138600|gb|EFJ05363.1| hypothetical protein SELMODRAFT_451281 [Selaginella moellendorffii]
gi|300139461|gb|EFJ06201.1| hypothetical protein SELMODRAFT_450988 [Selaginella moellendorffii]
Length = 275
Score = 311 bits (796), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 178/226 (78%), Gaps = 6/226 (2%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGL 232
NA KA+I++HPLYEQLL AHVACLRIATPVDQL RID Q++Q H ++KYS L Q L
Sbjct: 2 NAGLKADIVTHPLYEQLLEAHVACLRIATPVDQLSRIDGQISQCHHAIAKYSILANHQLL 61
Query: 233 VTDDKE-LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGEG 290
KE LD FM HYV+LL SFK+QLQ HVRVHA EAVMACWE+EQSL SLT G +PGEG
Sbjct: 62 CGSSKEELDHFMAHYVMLLKSFKDQLQHHVRVHAKEAVMACWELEQSLISLTAGAAPGEG 121
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGP----DTMGFGPLIPTESERSLMERVRQELKHEL 346
TGATMSDD+++Q D +GFGPLIPTE+ER+LMERVRQELKHEL
Sbjct: 122 TGATMSDDEDEQQQPQQEQQQQQQSDSDYWQDNLGFGPLIPTETERTLMERVRQELKHEL 181
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KQGY+ +IVD+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYPT
Sbjct: 182 KQGYRARIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 227
>gi|18407708|ref|NP_564805.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
gi|75309277|sp|Q9FPQ8.1|KNAT7_ARATH RecName: Full=Homeobox protein knotted-1-like 7; AltName:
Full=Protein IRREGULAR XYLEM 11; AltName: Full=Protein
KNAT7
gi|11878230|gb|AAG40858.1|AF308451_1 homeodomain transcription factor KNAT7 [Arabidopsis thaliana]
gi|109946473|gb|ABG48415.1| At1g62990 [Arabidopsis thaliana]
gi|332195913|gb|AEE34034.1| homeobox protein knotted-1-like 7 [Arabidopsis thaliana]
Length = 291
Score = 310 bits (795), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 153/235 (65%), Positives = 183/235 (77%), Gaps = 9/235 (3%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG VV QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 14 GGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 73
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 74 RSYASTAVG--YHHDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 131
Query: 281 SLTGVSPGEGTGATMSDDDED---QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SLTG + GEG+GATMS+D++D SD + D S G D GFGPL+PTESERSLMER
Sbjct: 132 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMER 190
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 191 VRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 245
>gi|326493406|dbj|BAJ85164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 310 bits (795), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 151/206 (73%), Positives = 174/206 (84%), Gaps = 9/206 (4%)
Query: 187 EQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHY 246
E+LL AHVACLR+ATPVDQLPRIDAQ+A ++ +G +ELD FMTHY
Sbjct: 1 ERLLEAHVACLRVATPVDQLPRIDAQIAARAPPPMPPASALSG------GEELDLFMTHY 54
Query: 247 VLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSD 306
VLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGATMSDD+++ VDS+
Sbjct: 55 VLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPGEGTGATMSDDEDNPVDSE 114
Query: 307 ANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRR 366
+N+FDG+ + D MGFG L TE ERSL+ERVRQELKHELKQGY+EK+VDIREEILRKRR
Sbjct: 115 SNMFDGN-DVSDGMGFGML--TEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRR 171
Query: 367 AGKLPGDTTSVLKSWWQSHSKWPYPT 392
AGKLPGDT S LK+WWQ+H+KWPYPT
Sbjct: 172 AGKLPGDTASTLKAWWQAHAKWPYPT 197
>gi|8493589|gb|AAF75812.1|AC011000_15 Strong similarity to Homeobox Protein HD1 from Brassica napus
gi|1170191, and contains a lactate/malate dehydrogenase
PF|00056 domain [Arabidopsis thaliana]
Length = 283
Score = 310 bits (794), Expect = 8e-82, Method: Compositional matrix adjust.
Identities = 153/235 (65%), Positives = 183/235 (77%), Gaps = 9/235 (3%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG VV QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 6 GGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 65
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 66 RSYASTAVG--YHHDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 123
Query: 281 SLTGVSPGEGTGATMSDDDED---QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SLTG + GEG+GATMS+D++D SD + D S G D GFGPL+PTESERSLMER
Sbjct: 124 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMER 182
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 183 VRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 237
>gi|26451690|dbj|BAC42940.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
Length = 284
Score = 310 bits (794), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 153/235 (65%), Positives = 183/235 (77%), Gaps = 9/235 (3%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG VV QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 7 GGDGDTAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 66
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 67 RSYASTAVGYH--HDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 124
Query: 281 SLTGVSPGEGTGATMSDDDED---QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SLTG + GEG+GATMS+D++D SD + D S G D GFGPL+PTESERSLMER
Sbjct: 125 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMER 183
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 184 VRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 238
>gi|302822119|ref|XP_002992719.1| KNOX transcription factor [Selaginella moellendorffii]
gi|302823878|ref|XP_002993587.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300138599|gb|EFJ05362.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300139460|gb|EFJ06200.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 304
Score = 310 bits (793), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 156/226 (69%), Positives = 178/226 (78%), Gaps = 6/226 (2%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGL 232
NA KA+I++HPLYEQLL AHVACLRIATPVDQL RID Q++Q H ++KYS L Q L
Sbjct: 31 NAGLKADIVTHPLYEQLLEAHVACLRIATPVDQLSRIDGQISQCHHAIAKYSILANHQLL 90
Query: 233 VTDDKE-LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGEG 290
KE LD FM HYV+LL SFK+QLQ HVRVHA EAVMACWE+EQSL SLT G +PGEG
Sbjct: 91 CGSSKEELDHFMAHYVMLLKSFKDQLQHHVRVHAKEAVMACWELEQSLISLTAGAAPGEG 150
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGP----DTMGFGPLIPTESERSLMERVRQELKHEL 346
TGATMSDD+++Q D +GFGPLIPTE+ER+LMERVRQELKHEL
Sbjct: 151 TGATMSDDEDEQQQPQQEQQQQQQSDSDYWQDNLGFGPLIPTETERTLMERVRQELKHEL 210
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KQGY+ +IVD+REEILRKRRAGKLPGDTTSVLK+WW +HSKWPYPT
Sbjct: 211 KQGYRARIVDVREEILRKRRAGKLPGDTTSVLKAWWHAHSKWPYPT 256
>gi|21618231|gb|AAM67281.1| homeodomain-containing protein HD1, putative [Arabidopsis thaliana]
Length = 283
Score = 308 bits (790), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/235 (64%), Positives = 183/235 (77%), Gaps = 9/235 (3%)
Query: 164 GADG---VVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVV 220
G DG VV QN + K EI +HP+YEQLL+AHVACLR+ATP+DQLP I+AQL+QS H++
Sbjct: 6 GGDGDAAVVAEQNRQLKGEIATHPMYEQLLAAHVACLRVATPIDQLPIIEAQLSQSHHLL 65
Query: 221 SKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ 280
Y++ G D ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L
Sbjct: 66 RSYASTAVG--YHHDRHELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLH 123
Query: 281 SLTGVSPGEGTGATMSDDDED---QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SLTG + GEG+GATMS+D++D SD + D S G D GFGPL+PTESE+SLMER
Sbjct: 124 SLTGATLGEGSGATMSEDEDDLPMDFSSDNSGVDFS-GGHDMTGFGPLLPTESEKSLMER 182
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELK ELKQG+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 183 VRQELKLELKQGFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 237
>gi|356539927|ref|XP_003538444.1| PREDICTED: homeobox protein knotted-1-like 7-like [Glycine max]
Length = 279
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 179/221 (80%), Gaps = 3/221 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
Q+ + KAEI +HPLYEQLL+AHVACLR+ATP+DQLP IDAQL+QS H++ Y +
Sbjct: 16 QHRQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYVSHNTLSL 75
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEGT
Sbjct: 76 SPHHRQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGT 135
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD ED + D +L S EG D MGFG +PTESERSLMERVRQELK ELKQG+K
Sbjct: 136 GATMSDD-EDDLQMDFSLDQSSAEGHDMMGFG--LPTESERSLMERVRQELKIELKQGFK 192
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+I D+REEILRKRRAGKLPGDTTSVLK+WWQ H+KWPYPT
Sbjct: 193 SRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 233
>gi|255637935|gb|ACU19284.1| unknown [Glycine max]
Length = 279
Score = 308 bits (788), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 151/221 (68%), Positives = 179/221 (80%), Gaps = 3/221 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
Q+ + KAEI +HPLYEQLL+AHVACLR+ATP+DQLP IDAQL+QS H++ Y +
Sbjct: 16 QHRQLKAEIATHPLYEQLLAAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYVSRNTLSL 75
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ELD F+ Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEGT
Sbjct: 76 SPHHRQELDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGT 135
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GATMSDD ED + D +L S EG D MGFG +PTESERSLMERVRQELK ELKQG+K
Sbjct: 136 GATMSDD-EDDLQMDFSLDQSSAEGHDMMGFG--LPTESERSLMERVRQELKIELKQGFK 192
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
KI D+REEILRKRRAGKLPGDTTSVL++WWQ H+KWPYPT
Sbjct: 193 SKIEDVREEILRKRRAGKLPGDTTSVLENWWQQHAKWPYPT 233
>gi|225426739|ref|XP_002282231.1| PREDICTED: homeobox protein knotted-1-like 7 [Vitis vinifera]
gi|297742619|emb|CBI34768.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 154/224 (68%), Positives = 186/224 (83%), Gaps = 4/224 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA--G 229
Q + K EI++HPLYEQLL+AHVACLR+ATP+DQLP IDAQL QS H++ Y++ G
Sbjct: 23 QQRQLKGEIVTHPLYEQLLAAHVACLRVATPIDQLPLIDAQLTQSHHLLRSYASQQHHHG 82
Query: 230 QGLVTDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
L ++ ELD F++ Y+L+LC+FKEQLQQHVRVHA+EAVMAC EIEQ+LQ+LTGVS G
Sbjct: 83 NSLSPHERQELDNFLSQYLLVLCTFKEQLQQHVRVHAVEAVMACREIEQTLQALTGVSLG 142
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG+GATMSDD+E+ + D +L G +G D MGFGPL+PTESER+LMERVRQELK ELKQ
Sbjct: 143 EGSGATMSDDEEE-MQMDFSLDQGGGDGHDMMGFGPLLPTESERTLMERVRQELKIELKQ 201
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
G+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ HSKWPYPT
Sbjct: 202 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHSKWPYPT 245
>gi|1170191|sp|P46606.1|HD1_BRANA RecName: Full=Homeobox protein HD1
gi|453949|emb|CAA82314.1| homeodomain-containing protein [Brassica napus]
gi|1090522|prf||2019252A homeobox protein
Length = 294
Score = 305 bits (780), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 148/224 (66%), Positives = 181/224 (80%), Gaps = 5/224 (2%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
QN + K EI +HP+Y+QLL+AHVACLR+ATP+DQLP I+AQL+ S H++ Y++ G
Sbjct: 27 QNRQMKGEIATHPMYDQLLAAHVACLRVATPIDQLPIIEAQLSHSHHLLRSYASTAVGFS 86
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D +ELD F+ YV++LCSFKEQLQQHVRVHA+EAVMAC EIE +L SLTG + GEG+
Sbjct: 87 H-HDRQELDNFLAQYVMVLCSFKEQLQQHVRVHAVEAVMACREIENNLHSLTGATLGEGS 145
Query: 292 GATMSDDDED-QVD--SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GATMS+D++D Q+D SD + D S G D GFGPL+PTESERSLMERVRQELK ELKQ
Sbjct: 146 GATMSEDEDDLQMDFSSDNSGVDFS-GGHDMTGFGPLLPTESERSLMERVRQELKLELKQ 204
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
G+K +I D+REEI+RKRRAGKLPGDTT+VLK+WWQ H KWPYPT
Sbjct: 205 GFKSRIEDVREEIMRKRRAGKLPGDTTTVLKNWWQQHCKWPYPT 248
>gi|357481771|ref|XP_003611171.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|355512506|gb|AES94129.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 305
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 181/224 (80%), Gaps = 3/224 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
+N + KAEI +HPLYEQLLSAHVACLR+ATP+DQLP IDAQL+QS H++ Y +
Sbjct: 23 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSL 82
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ++LD F+ Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEG+
Sbjct: 83 SPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGS 142
Query: 292 GATMSDDDEDQVDSDANLFDGS---LEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GATMSDD+++Q+ D L + S D MG GPL+PTESERSLMERVRQELK ELKQ
Sbjct: 143 GATMSDDEDEQLQMDYGLDNQSSGGGGDHDMMGLGPLLPTESERSLMERVRQELKIELKQ 202
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
G+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ H+KWPYPT
Sbjct: 203 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 246
>gi|357481773|ref|XP_003611172.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
gi|132424657|gb|ABO33481.1| class II KNOX homeobox transcription factor [Medicago truncatula]
gi|355512507|gb|AES94130.1| Homeobox protein knotted-1-like protein [Medicago truncatula]
Length = 292
Score = 303 bits (777), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 149/224 (66%), Positives = 181/224 (80%), Gaps = 3/224 (1%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
+N + KAEI +HPLYEQLLSAHVACLR+ATP+DQLP IDAQL+QS H++ Y +
Sbjct: 23 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSL 82
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ++LD F+ Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEG+
Sbjct: 83 SPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGS 142
Query: 292 GATMSDDDEDQVDSDANLFDGS---LEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GATMSDD+++Q+ D L + S D MG GPL+PTESERSLMERVRQELK ELKQ
Sbjct: 143 GATMSDDEDEQLQMDYGLDNQSSGGGGDHDMMGLGPLLPTESERSLMERVRQELKIELKQ 202
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
G+K +I D+REEILRKRRAGKLPGDTTSVLK+WWQ H+KWPYPT
Sbjct: 203 GFKSRIEDVREEILRKRRAGKLPGDTTSVLKNWWQQHAKWPYPT 246
>gi|226532656|ref|NP_001151200.1| LOC100284833 [Zea mays]
gi|195644982|gb|ACG41959.1| homeobox protein HD1 [Zea mays]
Length = 315
Score = 300 bits (767), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 145/217 (66%), Positives = 172/217 (79%), Gaps = 1/217 (0%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A + D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHSPFLXPHDK 113
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+LD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTGV+ EGTGATMS
Sbjct: 114 HDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMS 173
Query: 297 DDDEDQVDS-DANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
++DED+ + L D +G D MGFGPL+PT+SERSLM+RVRQELK ELKQG+K +I
Sbjct: 174 EEDEDEAPMLEVGLVDMGSDGHDMMGFGPLLPTDSERSLMDRVRQELKIELKQGFKSRIE 233
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
D+REEILRKRRAGKLPGDTTS+LK WWQ HSKWPYPT
Sbjct: 234 DVREEILRKRRAGKLPGDTTSILKQWWQQHSKWPYPT 270
>gi|125581054|gb|EAZ21985.1| hypothetical protein OsJ_05640 [Oryza sativa Japonica Group]
Length = 281
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 145/218 (66%), Positives = 164/218 (75%), Gaps = 42/218 (19%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA + +HPLYE+LL AHVACLR+ATP
Sbjct: 41 REKAAVAAHPLYERLLEAHVACLRVATP-------------------------------- 68
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
THYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGAT
Sbjct: 69 ---------THYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGAT 119
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MSDD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+
Sbjct: 120 MSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKL 178
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VDIREEILRKRRAGKLPGDT S+LK+WWQ+HSKWPYPT
Sbjct: 179 VDIREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 216
>gi|350535332|ref|NP_001233933.1| homeobox 2 protein [Solanum lycopersicum]
gi|4098246|gb|AAD00253.1| homeobox 2 protein [Solanum lycopersicum]
Length = 310
Score = 296 bits (757), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 146/220 (66%), Positives = 175/220 (79%), Gaps = 5/220 (2%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT-- 234
K+EI +HPLYEQLLSAHVACLR+ TP+DQLP IDAQL QS +++ Y++ Q +
Sbjct: 46 KSEIATHPLYEQLLSAHVACLRVRTPIDQLPLIDAQLTQSHNLLRSYASSQQQQQQHSLS 105
Query: 235 --DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTG 292
+ +ELD F+ Y+L+LCSFKEQLQQHVRVHA+EAVMAC EIEQ+LQ LTG + GEGTG
Sbjct: 106 HHERQELDNFLAQYLLVLCSFKEQLQQHVRVHAVEAVMACREIEQNLQLLTGATLGEGTG 165
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
ATMSDD ED++ D +L + D MG G +PTESERSLMERVRQELK ELKQG++
Sbjct: 166 ATMSDD-EDELQMDFSLDVSGGDAHDLMGMGFGLPTESERSLMERVRQELKIELKQGFRS 224
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+I D+REEILRKRRAGKLPGDTT+VLK+WWQ HSKWPYPT
Sbjct: 225 RIEDVREEILRKRRAGKLPGDTTTVLKNWWQQHSKWPYPT 264
>gi|218191994|gb|EEC74421.1| hypothetical protein OsI_09790 [Oryza sativa Indica Group]
gi|222624111|gb|EEE58243.1| hypothetical protein OsJ_09228 [Oryza sativa Japonica Group]
Length = 306
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 168/216 (77%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 46 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 105
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS
Sbjct: 106 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 165
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+D+++ D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D
Sbjct: 166 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 225
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 226 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 261
>gi|115450409|ref|NP_001048805.1| Os03g0123500 [Oryza sativa Japonica Group]
gi|113547276|dbj|BAF10719.1| Os03g0123500, partial [Oryza sativa Japonica Group]
Length = 287
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 168/216 (77%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 27 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 86
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS
Sbjct: 87 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 146
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+D+++ D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D
Sbjct: 147 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 206
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 207 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 242
>gi|75306683|sp|Q94LW3.1|KNOS3_ORYSJ RecName: Full=Homeobox protein knotted-1-like 3; AltName:
Full=Homeobox protein HOS66
gi|14149141|dbj|BAB55660.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|108705925|gb|ABF93720.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
gi|108705927|gb|ABF93722.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
Length = 314
Score = 294 bits (752), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 168/216 (77%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 54 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 113
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS
Sbjct: 114 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 173
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+D+++ D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D
Sbjct: 174 EDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIED 233
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 234 VREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 269
>gi|226531836|ref|NP_001150419.1| homeobox protein HD1 [Zea mays]
gi|195639114|gb|ACG39025.1| homeobox protein HD1 [Zea mays]
gi|414864470|tpg|DAA43027.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 310
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 170/216 (78%), Gaps = 1/216 (0%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 51 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 110
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+LD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS
Sbjct: 111 HDLDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMS 170
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+D+++ + L GS +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D
Sbjct: 171 EDEDEAPMLEVGLDMGS-DGHDMMGFGPLMPTDSERSLMERVRQELKMELKQGFKSRIED 229
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+REEILRKRRAGKLPGDTTS+LK WWQ HSKWPYPT
Sbjct: 230 VREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPT 265
>gi|326526697|dbj|BAK00737.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 315
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 142/218 (65%), Positives = 171/218 (78%), Gaps = 2/218 (0%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K E+ HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 53 KGEMAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSNGLLHSYAAHHRPFLSPHDK 112
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG S EGTGATMS
Sbjct: 113 QELDSFLAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGASLEEGTGATMS 172
Query: 297 DDDEDQ--VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+D+++ + +A D S G D MGFGPL+PT++ERSLMERVRQELK ELKQG+K +I
Sbjct: 173 EDEDEGPLMIMEAAPLDMSSNGHDMMGFGPLVPTDTERSLMERVRQELKIELKQGFKSRI 232
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
D+REEILRKRRAGKLPGDTT++LK WWQ H+KWPYPT
Sbjct: 233 GDVREEILRKRRAGKLPGDTTTILKQWWQEHAKWPYPT 270
>gi|168026109|ref|XP_001765575.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
gi|162683213|gb|EDQ69625.1| KNOX class 2 protein MKN6 [Physcomitrella patens subsp. patens]
Length = 518
Score = 292 bits (747), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 184/419 (43%), Positives = 242/419 (57%), Gaps = 41/419 (9%)
Query: 13 PLHHFTDQQQQQQQQPPSPPQQQHHQH---QQSIETTA---PNWLNSALLRSQQAQQQAA 66
PL D+ ++ + + HH+H + +T A P WL+SALLR QQA Q
Sbjct: 54 PLPKIEDEARKGKDHLRDSEDEDHHRHLLENEGSDTRACGPPTWLSSALLR-QQADQSLD 112
Query: 67 HF----SDTNFLNLRTTANNNNSNNNNT---ASDSDASQTPNQ-----WLSRTSSSLLHR 114
S++ +AN S NT A D +A+ NQ WLS + +
Sbjct: 113 GTENCQSESEKWCPVCSANGRQSCVCNTRMHAGDGNATSFLNQNTYTHWLSMQGTGMHGP 172
Query: 115 NHSDVIDDVTPANDSIIAAVESADLKNANSENMNNASTNNK--------SEGVVVESGAD 166
H D+ V+ + A N++ A + S G +G
Sbjct: 173 GHEHRPGPELDGKDNDFG-VDRPQFRMATELNLSAAHGRDGQRFLELHPSLGGARYAGDY 231
Query: 167 GVVNWQNARYKAE---------ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ 217
G +W AR+KAE I++HPLY ++L H ACLR+ TPVDQLP I+AQLAQ+
Sbjct: 232 GRTDWDGARHKAEWEEIRNRALIVNHPLYPEMLMNHAACLRVGTPVDQLPSIEAQLAQAP 291
Query: 218 HVVSKYSALGAGQGLVTDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIE 276
+++ KY AL + D+K ELD+FMT Y LL FK+ LQ HV EA++ CWE+E
Sbjct: 292 NIIEKYRALHDQVDITEDEKVELDRFMTEYTALLGDFKDVLQHHVYTDVAEAMIGCWELE 351
Query: 277 QSLQSLTGVSPGEGTGATMSDDDEDQVDSD---ANLFDGSLEGPDTMGFGPLIPTESERS 333
Q+L +LTGVSPGEG+GATMSD D+DQ +D S++ D+ G+GPL+PTE+ERS
Sbjct: 352 QALHALTGVSPGEGSGATMSDVDDDQDYDSDYAGTAYDQSMDYHDSGGYGPLVPTETERS 411
Query: 334 LMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LMERVRQELKHELKQGY+ KI D+REEILRKRRAGKLP TT+VLK+WWQ+HSKWPYPT
Sbjct: 412 LMERVRQELKHELKQGYRSKIEDVREEILRKRRAGKLPEGTTTVLKAWWQAHSKWPYPT 470
>gi|357114296|ref|XP_003558936.1| PREDICTED: homeobox protein knotted-1-like 3-like [Brachypodium
distachyon]
Length = 260
Score = 290 bits (743), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 141/212 (66%), Positives = 167/212 (78%), Gaps = 2/212 (0%)
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D ++LD F
Sbjct: 4 HPLCEQLVAAHVGCLRVATPIDHLPIIDAQLAQSGGLLHSYAAHHRPFLSPHDKQDLDSF 63
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDED- 301
+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS+D+E+
Sbjct: 64 LAQYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEEEP 123
Query: 302 -QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
+ A D S G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D+REE
Sbjct: 124 QTIMEAAAAMDMSSNGHDMMGFGPLVPTDSERSLMERVRQELKIELKQGFKSRIGDVREE 183
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ILRKRRAGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 184 ILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 215
>gi|115444643|ref|NP_001046101.1| Os02g0182800 [Oryza sativa Japonica Group]
gi|14149137|dbj|BAB55658.1| KNOX family class 2 homeodomain protein [Oryza sativa Japonica
Group]
gi|113535632|dbj|BAF08015.1| Os02g0182800, partial [Oryza sativa Japonica Group]
Length = 212
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/156 (83%), Positives = 146/156 (93%), Gaps = 1/156 (0%)
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+ELD FMTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGATMS
Sbjct: 1 EELDLFMTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMS 60
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVR ELK+ELKQGYKEK+VD
Sbjct: 61 DDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQGYKEKLVD 119
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
IREEILRKRRAGKLPGDT S+LK+WWQ+HSKWPYPT
Sbjct: 120 IREEILRKRRAGKLPGDTASILKAWWQAHSKWPYPT 155
>gi|297608351|ref|NP_001061467.2| Os08g0292900 [Oryza sativa Japonica Group]
gi|255678331|dbj|BAF23381.2| Os08g0292900 [Oryza sativa Japonica Group]
Length = 194
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 128/150 (85%), Positives = 141/150 (94%), Gaps = 2/150 (1%)
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQ 302
MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGATMSD ++DQ
Sbjct: 1 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQ 60
Query: 303 VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL 362
DS+AN++D SL+G D MGFG +PTESERSLMERVRQELKHELKQGYKEK++DIREEIL
Sbjct: 61 ADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLIDIREEIL 118
Query: 363 RKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RKRRAGKLPGDTTS LK+WWQSH+KWPYPT
Sbjct: 119 RKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 148
>gi|218200874|gb|EEC83301.1| hypothetical protein OsI_28664 [Oryza sativa Indica Group]
gi|222640286|gb|EEE68418.1| hypothetical protein OsJ_26781 [Oryza sativa Japonica Group]
Length = 212
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 129/157 (82%), Positives = 144/157 (91%), Gaps = 2/157 (1%)
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
DK ++ THYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SPGEGTGATM
Sbjct: 2 DKYYEEDWTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQNLQSLTGASPGEGTGATM 61
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
SD ++DQ DS+AN++D SL+G D MGFG +PTESERSLMERVRQELKHELKQGYKEK++
Sbjct: 62 SDGEDDQADSEANMYDPSLDGADNMGFG--LPTESERSLMERVRQELKHELKQGYKEKLI 119
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
DIREEILRKRRAGKLPGDTTS LK+WWQSH+KWPYPT
Sbjct: 120 DIREEILRKRRAGKLPGDTTSTLKAWWQSHAKWPYPT 156
>gi|238005954|gb|ACR34012.1| unknown [Zea mays]
Length = 194
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 127/150 (84%), Positives = 142/150 (94%), Gaps = 1/150 (0%)
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQ 302
MTHYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGTGATMSDD+++Q
Sbjct: 1 MTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQ 60
Query: 303 VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL 362
VDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELK+ELKQGYKEK+VDIREEI+
Sbjct: 61 VDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKNELKQGYKEKLVDIREEIM 119
Query: 363 RKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 120 RKRRAGKLPGDTASVLKAWWQAHSKWPYPT 149
>gi|371767700|gb|AEX56205.1| class II KNOX protein [Gymnadenia odoratissima]
Length = 168
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 130/150 (86%), Positives = 140/150 (93%)
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQ 302
M HYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTG+SPGEGTGATMSDDD+DQ
Sbjct: 1 MAHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGISPGEGTGATMSDDDDDQ 60
Query: 303 VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL 362
D + N +DGS +G D+MGFGPLIPTESERSLMERVRQELKHELK GYKEKIVD+REEIL
Sbjct: 61 ADGETNFYDGSFDGSDSMGFGPLIPTESERSLMERVRQELKHELKNGYKEKIVDVREEIL 120
Query: 363 RKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RKRRAGKLP DTTS LK+WWQSH+KWPYPT
Sbjct: 121 RKRRAGKLPVDTTSTLKAWWQSHAKWPYPT 150
>gi|371767702|gb|AEX56206.1| class II KNOX protein [Gymnadenia rhellicani]
Length = 166
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 129/148 (87%), Positives = 139/148 (93%)
Query: 245 HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVD 304
HYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTG+SPGEGTGATMSDDD+DQ D
Sbjct: 1 HYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGISPGEGTGATMSDDDDDQAD 60
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
+ N +DGS +G D+MGFGPLIPTESERSLMERVRQELKHELK GYKEKIVD+REEILRK
Sbjct: 61 GETNFYDGSFDGSDSMGFGPLIPTESERSLMERVRQELKHELKNGYKEKIVDVREEILRK 120
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RRAGKLP DTTS LK+WWQSH+KWPYPT
Sbjct: 121 RRAGKLPVDTTSTLKAWWQSHAKWPYPT 148
>gi|222635984|gb|EEE66116.1| hypothetical protein OsJ_22154 [Oryza sativa Japonica Group]
Length = 256
Score = 271 bits (692), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 123/151 (81%), Positives = 141/151 (93%), Gaps = 1/151 (0%)
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDED 301
+ THYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQ+LQSLTG SP EG+GATMSDD+++
Sbjct: 47 YQTHYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQTLQSLTGASPREGSGATMSDDEDN 106
Query: 302 QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEI 361
QVDS++N+FDG+ +G D MGFGPL+ TE ERSL+ERVRQELKHELKQGY+EK+VDIREEI
Sbjct: 107 QVDSESNMFDGN-DGSDGMGFGPLMLTEGERSLVERVRQELKHELKQGYREKLVDIREEI 165
Query: 362 LRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LRKRRAGKLPGDT S LK+WWQ+HSKWPYPT
Sbjct: 166 LRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 196
>gi|371767704|gb|AEX56207.1| class II KNOX protein [Orchis anthropophora]
gi|371767706|gb|AEX56208.1| class II KNOX protein [Orchis italica]
Length = 166
Score = 268 bits (684), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 133/148 (89%), Positives = 141/148 (95%)
Query: 245 HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVD 304
HYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGVSPGEGTGATMSDDD+DQ D
Sbjct: 1 HYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDDDDQED 60
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
S+ N++DGSL+ DTMGFGPL+PTESERSLMERVR ELKHELKQ YKEKIVDIREEILRK
Sbjct: 61 SETNIYDGSLDVHDTMGFGPLVPTESERSLMERVRHELKHELKQDYKEKIVDIREEILRK 120
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RRAGKLPGDTTS LK+WWQSHSKWPYPT
Sbjct: 121 RRAGKLPGDTTSTLKAWWQSHSKWPYPT 148
>gi|371767697|gb|AEX56204.1| class II KNOX protein, partial [Dactylorhiza viridis]
Length = 166
Score = 266 bits (681), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 132/148 (89%), Positives = 141/148 (95%)
Query: 245 HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVD 304
HYVLLLCSFKEQLQQHVRVHAMEAVMACWE+EQSLQSLTGVSPGEGTGATMSDDD+DQ D
Sbjct: 1 HYVLLLCSFKEQLQQHVRVHAMEAVMACWELEQSLQSLTGVSPGEGTGATMSDDDDDQED 60
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
S+ N++DGSL+ DTMG+GPL+PTESERSLMERVR ELKHELKQ YKEKIVDIREEILRK
Sbjct: 61 SETNIYDGSLDVHDTMGYGPLVPTESERSLMERVRHELKHELKQDYKEKIVDIREEILRK 120
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RRAGKLPGDTTS LK+WWQSHSKWPYPT
Sbjct: 121 RRAGKLPGDTTSTLKAWWQSHSKWPYPT 148
>gi|224092536|ref|XP_002309651.1| predicted protein [Populus trichocarpa]
gi|222855627|gb|EEE93174.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 265 bits (678), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 122/127 (96%), Positives = 126/127 (99%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDS+AN+FDGSLEG DTMGFGPL
Sbjct: 1 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSEANMFDGSLEGVDTMGFGPL 60
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK+WWQSH
Sbjct: 61 VPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKAWWQSH 120
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 121 SKWPYPT 127
>gi|413957111|gb|AFW89760.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 191
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/146 (75%), Positives = 125/146 (85%), Gaps = 1/146 (0%)
Query: 248 LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDS-D 306
+LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTGV+ EGTGATMS++DED+ +
Sbjct: 1 MLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGVTLEEGTGATMSEEDEDEAPMLE 60
Query: 307 ANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRR 366
L D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D+REEILRKRR
Sbjct: 61 VGLVDMGSDGHDMMGFGPLLPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRR 120
Query: 367 AGKLPGDTTSVLKSWWQSHSKWPYPT 392
AGKLPGDTTS+LK WWQ HSKWPYPT
Sbjct: 121 AGKLPGDTTSILKQWWQQHSKWPYPT 146
>gi|28564620|dbj|BAC57787.1| OSH45 [Oryza sativa Japonica Group]
gi|38175509|dbj|BAD01204.1| OSH45 [Oryza sativa Japonica Group]
Length = 181
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 118/127 (92%), Gaps = 2/127 (1%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVMACWE+EQ+LQSLTG SPGEGTGATMSD ++DQ DS+AN++D SL+G D MGFG
Sbjct: 1 MEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG-- 58
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+PTESERSLMERVRQELKHELKQGYKEK++DIREEILRKRRAGKLPGDTTS LK+WWQSH
Sbjct: 59 LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSH 118
Query: 386 SKWPYPT 392
+KWPYPT
Sbjct: 119 AKWPYPT 125
>gi|1805619|dbj|BAA08554.1| OSH45 [Oryza sativa Japonica Group]
Length = 171
Score = 231 bits (589), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 105/127 (82%), Positives = 118/127 (92%), Gaps = 2/127 (1%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVMACWE+EQ+LQSLTG SPGEGTGATMSD ++DQ DS+AN++D SL+G D MGFG
Sbjct: 1 MEAVMACWELEQNLQSLTGASPGEGTGATMSDGEDDQADSEANMYDPSLDGADNMGFG-- 58
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+PTESERSLMERVRQELKHELKQGYKEK++DIREEILRKRRAGKLPGDTTS LK+WWQSH
Sbjct: 59 LPTESERSLMERVRQELKHELKQGYKEKLIDIREEILRKRRAGKLPGDTTSTLKAWWQSH 118
Query: 386 SKWPYPT 392
+KWPYPT
Sbjct: 119 AKWPYPT 125
>gi|414864471|tpg|DAA43028.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 198
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 109/148 (73%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
Query: 245 HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVD 304
Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS+D+++
Sbjct: 7 QYLMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDEAPM 66
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
+ L GS +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D+REEILRK
Sbjct: 67 LEVGLDMGS-DGHDMMGFGPLMPTDSERSLMERVRQELKMELKQGFKSRIEDVREEILRK 125
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RRAGKLPGDTTS+LK WWQ HSKWPYPT
Sbjct: 126 RRAGKLPGDTTSILKQWWQEHSKWPYPT 153
>gi|323388713|gb|ADX60161.1| ORPHAN transcription factor [Zea mays]
Length = 171
Score = 229 bits (584), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 104/127 (81%), Positives = 119/127 (93%), Gaps = 1/127 (0%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVM CWE+EQSLQSLTG SPGEGTGATMSDD+++QVDS+AN+FDG+ +G D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPL 59
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+ TE ERSL+ERVRQELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+H
Sbjct: 60 MLTEGERSLVERVRQELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAH 119
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 120 SKWPYPT 126
>gi|4887620|dbj|BAA77823.1| HOS66 [Oryza sativa Japonica Group]
gi|108705928|gb|ABF93723.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
Length = 196
Score = 228 bits (581), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 123/148 (83%)
Query: 245 HYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVD 304
Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS+D+++
Sbjct: 4 QYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAP 63
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D+REEILRK
Sbjct: 64 MLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRK 123
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RRAGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 124 RRAGKLPGDTTTILKQWWQQHSKWPYPT 151
>gi|85361943|emb|CAJ58045.1| KNOX family class 2 homeodomain protein [Zea mays]
Length = 171
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 118/127 (92%), Gaps = 1/127 (0%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVM CWE+EQSLQSLTG SPGEGTG TMSDD+++QVDS+AN+FDG+ +G D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGGTMSDDEDNQVDSEANMFDGN-DGSDGMGFGPL 59
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
I TE ERSL+ERVR+ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+H
Sbjct: 60 ILTEGERSLVERVRKELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAH 119
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 120 SKWPYPT 126
>gi|14090233|dbj|BAA77821.2| HOS58 [Oryza sativa Japonica Group]
Length = 183
Score = 227 bits (578), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 103/127 (81%), Positives = 118/127 (92%), Gaps = 1/127 (0%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVM CWE+EQSLQSLTG SPGEGTGATMSDD+++QVDS+AN+FDG+ +G D MGFGPL
Sbjct: 1 MEAVMGCWELEQSLQSLTGASPGEGTGATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPL 59
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+ TE ERSL+ERVR ELK+ELKQGYKEK+VDIREEILRKRRAGKLPGDT S+LK+WWQ+H
Sbjct: 60 MLTEGERSLVERVRHELKNELKQGYKEKLVDIREEILRKRRAGKLPGDTASILKAWWQAH 119
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 120 SKWPYPT 126
>gi|108705926|gb|ABF93721.1| Homeobox protein HD1, putative, expressed [Oryza sativa Japonica
Group]
gi|215765705|dbj|BAG87402.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 191
Score = 224 bits (572), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 105/146 (71%), Positives = 122/146 (83%)
Query: 247 VLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSD 306
++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LTG + EGTGATMS+D+++
Sbjct: 1 MMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLTGATLEEGTGATMSEDEDETAPML 60
Query: 307 ANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRR 366
D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I D+REEILRKRR
Sbjct: 61 EGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRIEDVREEILRKRR 120
Query: 367 AGKLPGDTTSVLKSWWQSHSKWPYPT 392
AGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 121 AGKLPGDTTTILKQWWQQHSKWPYPT 146
>gi|371767694|gb|AEX56203.1| class II KNOX protein [Linaria vulgaris]
Length = 171
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/152 (70%), Positives = 127/152 (83%), Gaps = 5/152 (3%)
Query: 246 YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDS 305
Y+L+LCSF+EQLQQHVRVHA+EAV+AC EIE +LQSLTGV+ GEG+GATMSDD+++ +
Sbjct: 2 YMLVLCSFREQLQQHVRVHAVEAVVACREIEHNLQSLTGVALGEGSGATMSDDEDEMMMH 61
Query: 306 DANLF-----DGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
L G + D MGFGPL+PTESERSLM+RVRQELK ELKQG+K +I D+REE
Sbjct: 62 QMELSHLDHQSGPHDAHDLMGFGPLLPTESERSLMDRVRQELKIELKQGFKSRIEDVREE 121
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ILRKRRAGKLPGDTTSVLK+WW+ HSKWPYPT
Sbjct: 122 ILRKRRAGKLPGDTTSVLKNWWEQHSKWPYPT 153
>gi|14090235|dbj|BAA77822.2| HOS59 [Oryza sativa Japonica Group]
Length = 178
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 101/127 (79%), Positives = 118/127 (92%), Gaps = 1/127 (0%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPL 325
MEAVMACWE+EQ+LQSLTG SP EG+GATMSDD+++QVDS++N+FDG+ +G D MGFGPL
Sbjct: 1 MEAVMACWELEQTLQSLTGASPREGSGATMSDDEDNQVDSESNMFDGN-DGSDGMGFGPL 59
Query: 326 IPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+ TE ERSL+ERVRQELKHELKQGY+EK+VDIREEILRKRRAGKLPGDT S LK+WWQ+H
Sbjct: 60 MLTEGERSLVERVRQELKHELKQGYREKLVDIREEILRKRRAGKLPGDTASTLKAWWQAH 119
Query: 386 SKWPYPT 392
SKWPYPT
Sbjct: 120 SKWPYPT 126
>gi|218190193|gb|EEC72620.1| hypothetical protein OsI_06117 [Oryza sativa Indica Group]
Length = 250
Score = 220 bits (561), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 113/177 (63%), Positives = 135/177 (76%), Gaps = 4/177 (2%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R KA + +HPL +LL+A VACLR+ATPV QLPR+D + S + S+ G
Sbjct: 41 REKAAVAAHPLSARLLAAPVACLRVATPVAQLPRLDEADSASARLPSQPPPTTDANGGPL 100
Query: 235 ---DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ L +THYVLLLCSFKEQLQQHVRVHAMEAVM CWE+EQSLQSLTG SPGEGT
Sbjct: 101 RWRGARPLHVVVTHYVLLLCSFKEQLQQHVRVHAMEAVMGCWELEQSLQSLTGASPGEGT 160
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GATMSDD+++QVDS+AN+FDG+ +G D MGFGPL+ TE ERSL+ERVR ELK+ELKQ
Sbjct: 161 GATMSDDEDNQVDSEANMFDGN-DGSDGMGFGPLMLTEGERSLVERVRHELKNELKQ 216
>gi|294460668|gb|ADE75908.1| unknown [Picea sitchensis]
Length = 174
Score = 212 bits (539), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/136 (80%), Positives = 121/136 (88%), Gaps = 1/136 (0%)
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMG-FGP 324
MEAVMACWE+EQSL +LTGVSPGEGTGATMSDD++DQ DSD NLFD L+G D +G FGP
Sbjct: 1 MEAVMACWELEQSLHTLTGVSPGEGTGATMSDDEDDQADSDTNLFDLGLDGQDGVGSFGP 60
Query: 325 LIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQS 384
LIPTE+ERSLMERVRQELKHELKQGY+ +I DIREEILRKRRAGKLPGDTTSVLK+WWQ+
Sbjct: 61 LIPTENERSLMERVRQELKHELKQGYRSRIEDIREEILRKRRAGKLPGDTTSVLKNWWQA 120
Query: 385 HSKWPYPTVSPVTLLL 400
HSKWPYPT T L+
Sbjct: 121 HSKWPYPTEDEKTRLV 136
>gi|224092538|ref|XP_002309652.1| hypothetical protein POPTRDRAFT_654197 [Populus trichocarpa]
gi|222855628|gb|EEE93175.1| hypothetical protein POPTRDRAFT_654197 [Populus trichocarpa]
Length = 227
Score = 207 bits (527), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 142/255 (55%), Positives = 166/255 (65%), Gaps = 40/255 (15%)
Query: 1 MAFHHNHLSQDLPLHHFTDQQQQQQQQPPSPPQQQHHQHQQSIETTAPNWLNSALLRSQQ 60
MAFHHN SQDLPLHHFTDQQ + P PNWLN+ALLRSQQ
Sbjct: 1 MAFHHNLPSQDLPLHHFTDQQATENTTAP------------------PNWLNTALLRSQQ 42
Query: 61 A-QQQAAHFSDTNFLNLRTTANNNNSNNNNTASDSDASQTPNQWLSRTSSSLLHRNHSDV 119
QQ+ H N ++ + + + AS P QWLSR+SSSLL+RNHS V
Sbjct: 43 PPQQRTHHHFTDNNNTNNFLNLHSATPSTTATTSDSASHNPTQWLSRSSSSLLNRNHSTV 102
Query: 120 IDDVTPA----NDSIIAAV--ESADLKNANSENMNNASTNNKSEG-VVVESGADG---VV 169
IDDV+ A + IIA++ ES++LK+ N KSEG +VESG G VV
Sbjct: 103 IDDVSAAAAGGDHPIIASMSQESSELKSMN-----------KSEGETMVESGGGGGEAVV 151
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
NWQNA+ KA+IL+HPLY+QLLSAHVACLRIATPVDQLPRIDAQLAQSQ VV+KYSALG+
Sbjct: 152 NWQNAKCKADILAHPLYDQLLSAHVACLRIATPVDQLPRIDAQLAQSQQVVAKYSALGSH 211
Query: 230 QGLVTDDKELDQFMT 244
QGLV DDKELDQFM
Sbjct: 212 QGLVPDDKELDQFMV 226
>gi|224163293|ref|XP_002338542.1| predicted protein [Populus trichocarpa]
gi|222872740|gb|EEF09871.1| predicted protein [Populus trichocarpa]
Length = 156
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 91/111 (81%), Positives = 102/111 (91%)
Query: 282 LTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE 341
+ GVSPGEGTGATMSDD++DQ +SD N DG+L+G DTMGFGPL+PTE+ERSLMERVRQE
Sbjct: 1 MIGVSPGEGTGATMSDDEDDQAESDTNFNDGNLDGLDTMGFGPLVPTETERSLMERVRQE 60
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LKHE KQ YKEKIVDIREEILRKRRAGKLPGDTTS LK+WWQ+HSKWPYP+
Sbjct: 61 LKHEFKQDYKEKIVDIREEILRKRRAGKLPGDTTSHLKAWWQTHSKWPYPS 111
>gi|388520497|gb|AFK48310.1| unknown [Medicago truncatula]
Length = 160
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/132 (62%), Positives = 108/132 (81%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
+N + KAEI +HPLYEQLLSAHVACLR+ATP+DQLP IDAQL+QS H++ Y +
Sbjct: 22 ENRQLKAEIATHPLYEQLLSAHVACLRVATPIDQLPLIDAQLSQSHHLLRSYISQQTHSL 81
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ++LD F+ Y+++LC+FKEQLQQHVRVHA+EAVMAC +IE +LQ+LTGVS GEG+
Sbjct: 82 SPHDRQQLDNFLAQYLIVLCTFKEQLQQHVRVHAVEAVMACRDIENTLQALTGVSLGEGS 141
Query: 292 GATMSDDDEDQV 303
GATMSDD+++Q+
Sbjct: 142 GATMSDDEDEQL 153
>gi|33333540|gb|AAQ11886.1| knotted 6 [Hordeum vulgare]
Length = 149
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 69/102 (67%), Positives = 84/102 (82%), Gaps = 2/102 (1%)
Query: 293 ATMSDDDEDQ--VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
ATMS+D+++ + +A D S G D MGFGPL+PT++ERSLMERVRQELK ELKQG+
Sbjct: 3 ATMSEDEDEGPLMIMEAAPLDMSSNGHDMMGFGPLVPTDTERSLMERVRQELKIELKQGF 62
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K +I D+REEILRKRRAGKLPGDTT++LK WWQ H+KWPYPT
Sbjct: 63 KSRIGDVREEILRKRRAGKLPGDTTTILKQWWQEHAKWPYPT 104
>gi|25446694|gb|AAN74841.1| Putative homeobox gene [Oryza sativa Japonica Group]
Length = 143
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 67/98 (68%), Positives = 79/98 (80%)
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
MS+D+++ D +G D MGFGPL+PT+SERSLMERVRQELK ELKQG+K +I
Sbjct: 1 MSEDEDETAPMLEGPMDMGSDGHDLMGFGPLMPTDSERSLMERVRQELKIELKQGFKSRI 60
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
D+REEILRKRRAGKLPGDTT++LK WWQ HSKWPYPT
Sbjct: 61 EDVREEILRKRRAGKLPGDTTTILKQWWQQHSKWPYPT 98
>gi|25446693|gb|AAN74840.1| Putative KNOX family class 2 homeodomain protein [Oryza sativa
Japonica Group]
Length = 171
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 68/107 (63%), Positives = 81/107 (75%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A D
Sbjct: 46 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAAHHRPFLSPHDK 105
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
+ELD F+ Y++LLCSF+EQLQQHVRVHA+EAVMAC EIEQSLQ LT
Sbjct: 106 QELDSFLAQYMMLLCSFREQLQQHVRVHAVEAVMACREIEQSLQDLT 152
>gi|356554245|ref|XP_003545459.1| PREDICTED: uncharacterized protein LOC100776775 [Glycine max]
Length = 395
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 278 SLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
S+ L VSPGEGTGATMSDD+++QV SDANLFDG+L+GPD+MGFGPLIPTE+ERSL ER
Sbjct: 21 SVSVLRRVSPGEGTGATMSDDEDEQVGSDANLFDGALDGPDSMGFGPLIPTENERSLTER 80
Query: 338 VRQELKHELKQ 348
VR E+KHELKQ
Sbjct: 81 VRPEVKHELKQ 91
>gi|254749398|dbj|BAH86595.1| class2 knotted-like homeobox [Selaginella uncinata]
Length = 111
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 54/64 (84%), Positives = 59/64 (92%)
Query: 329 ESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKW 388
E+ER+LMERVR ELK ELKQGYK KI D+REEILRKRRAGKLPGDTTSVLKSWW +HSKW
Sbjct: 2 ETERTLMERVRHELKIELKQGYKAKINDVREEILRKRRAGKLPGDTTSVLKSWWHAHSKW 61
Query: 389 PYPT 392
PYP+
Sbjct: 62 PYPS 65
>gi|374255987|gb|AEZ00855.1| putative knotted-like homeodomain protein, partial [Elaeis
guineensis]
Length = 109
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/52 (96%), Positives = 51/52 (98%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS LK+WWQSHSKWPYPT
Sbjct: 1 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSTLKAWWQSHSKWPYPT 52
>gi|6016216|sp|P56660.1|KNOX2_MAIZE RecName: Full=Homeobox protein knotted-1-like 2
Length = 88
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/55 (87%), Positives = 53/55 (96%)
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELKHELKQGY++K+VDIREEILRKRRAGKLPGDT S LK+WWQ+HSKWPYPT
Sbjct: 1 VRQELKHELKQGYRDKLVDIREEILRKRRAGKLPGDTASTLKAWWQAHSKWPYPT 55
>gi|6016222|sp|P56664.1|KNOX6_MAIZE RecName: Full=Homeobox protein knotted-1-like 6
gi|6016223|sp|P56665.1|KNOX7_MAIZE RecName: Full=Homeobox protein knotted-1-like 7
gi|913144|gb|AAB33490.1| KNOX6=class 2 knotted1-like homeobox gene knox6 product
{homeodomain} [maize, Peptide Partial, 85 aa]
gi|913145|gb|AAB33491.1| KNOX7=class 1 knotted1-like homeobox gene knox7 product
{homeodomain} [maize, Peptide Partial, 85 aa]
Length = 85
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/52 (88%), Positives = 51/52 (98%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK+ELKQGYKEK+VDIREEI+RKRRAGKLPGDT SVLK+WWQ+HSKWPYPT
Sbjct: 1 ELKNELKQGYKEKLVDIREEIMRKRRAGKLPGDTASVLKAWWQAHSKWPYPT 52
>gi|1045046|emb|CAA63132.1| KNAT5 homeobox protein [Arabidopsis thaliana]
Length = 104
Score = 105 bits (261), Expect = 5e-20, Method: Composition-based stats.
Identities = 47/53 (88%), Positives = 52/53 (98%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELKHELKQG+KEKIVDIREEI+RKRRAGKLPGDTTSVLK WW++HSKWPYPT
Sbjct: 1 KELKHELKQGFKEKIVDIREEIMRKRRAGKLPGDTTSVLKEWWRTHSKWPYPT 53
>gi|326524884|dbj|BAK04378.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 337
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG-- 231
A KA+I++HPLY LL++++ C ++ P + L R+ A V +K A G G+G
Sbjct: 77 ATIKAKIMAHPLYSPLLASYLDCQKVGAPPEVLERLSA-------VAAKLDA-GHGRGQH 128
Query: 232 -LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELDQFM Y +L ++E+L + ++ EA +E L S+T
Sbjct: 129 EAPRPDPELDQFMEAYCNMLVKYREELARPIQ----EATEFFKSVETQLDSITFTDSTNC 184
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
GA S+DD D S D S E +ELKH+L + Y
Sbjct: 185 EGAGSSEDDLDA--SCVEEIDPSAED-----------------------KELKHQLLRKY 219
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E ++R+ GKLP + L WW+ HSKWPYP+
Sbjct: 220 GGYVGSLRQEFCKRRKKGKLPKEARQKLLHWWELHSKWPYPS 261
>gi|357113910|ref|XP_003558744.1| PREDICTED: homeobox protein knotted-1-like 8-like [Brachypodium
distachyon]
Length = 345
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 104/216 (48%), Gaps = 34/216 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HPLY LL++++ C ++ P D L R+ A A+ ++ + D
Sbjct: 87 KAKIMAHPLYSPLLASYLDCHKVGAPPDVLDRLSAVAAKQLDAAAERRRHREPPRV---D 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + EA +E L S+T S EG G+ S
Sbjct: 144 PELDQFMEAYCNMLAKYREELARPI----WEATEFFRSVETQLDSITADSNCEGAGS--S 197
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+DD D S A D S E +ELKH+L + Y +
Sbjct: 198 EDDLDT--SCAEEIDPSAED-----------------------RELKHQLLRKYGGYVGS 232
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R+E ++R+ GKLP + L WW+ H KWPYP+
Sbjct: 233 LRQEFCKRRKKGKLPKEARQKLLQWWELHCKWPYPS 268
>gi|218775075|dbj|BAH03543.1| homeobox protein [Triticum aestivum]
Length = 337
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGL- 232
A KA+I++HPLY LL++++ C ++ P + L R+ A V +K A G G+G
Sbjct: 77 ATIKAKIMAHPLYSPLLASYLDCQKVGAPPEVLERLSA-------VAAKLDA-GHGRGKH 128
Query: 233 --VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELDQFM Y +L ++E+L + ++ EA +E L S+T
Sbjct: 129 ESPRPDPELDQFMEAYCNMLAKYREELARPIQ----EATEFFKSVETQLDSITFTDSTNC 184
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
GA S+D+ D S D S E +ELKH+L + Y
Sbjct: 185 EGAGSSEDELD--TSCVEEIDPSAED-----------------------KELKHQLLRKY 219
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E ++R+ GKLP + L WW+ HSKWPYP+
Sbjct: 220 GGYVGSLRQEFCKRRKKGKLPKEARQKLLHWWELHSKWPYPS 261
>gi|6016214|sp|P56659.1|KNOX1_MAIZE RecName: Full=Homeobox protein knotted-1-like 1
Length = 88
Score = 99.4 bits (246), Expect = 3e-18, Method: Composition-based stats.
Identities = 46/55 (83%), Positives = 50/55 (90%)
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
VRQELK ELKQG+K +I D+REEILRKRRAGKLPGDTTS+LK WWQ HSKWPYPT
Sbjct: 1 VRQELKLELKQGFKSRIEDVREEILRKRRAGKLPGDTTSILKQWWQEHSKWPYPT 55
>gi|224123968|ref|XP_002330254.1| predicted protein [Populus trichocarpa]
gi|222871710|gb|EEF08841.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 104/219 (47%), Gaps = 30/219 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HP Y L+SAH+ C ++ P + + ++A + + + ++ + +GA D
Sbjct: 67 KTQIANHPRYPDLVSAHLECQKVGAPPEMVSLLEA-IGRGNYKINSFYEIGA-------D 118
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA IE L SL +GT M
Sbjct: 119 PELDEFMESYCEVLRRYKEELSKPFD----EAATFLSSIESQLSSLC-----KGTLTKMF 169
Query: 297 D---DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
D DE S+ L G +E ++ E + + Q LK L + Y
Sbjct: 170 DYGSADEPAGTSEEELSCGEVEASESQ----------ETTGVSSQEQNLKGMLMRKYSAH 219
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ ++R+E L+ R+ GKLP D + L WW H +WPYPT
Sbjct: 220 LSNLRKEFLKNRKKGKLPKDARTTLLDWWNHHYRWPYPT 258
>gi|218193820|gb|EEC76247.1| hypothetical protein OsI_13685 [Oryza sativa Indica Group]
Length = 559
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 112/237 (47%), Gaps = 38/237 (16%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
+G V +GA+ V KAEI+SHP Y LL+A++ C ++ P D L ++ A A
Sbjct: 277 QGQVSPAGAEAAV-------KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQ 329
Query: 217 QHVVSKYSALGAGQGLVTDDKE-LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 275
Q + + DD + LDQFM Y +L ++E+L++ ++ EA +
Sbjct: 330 QLDEADGHPRRLHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPIQ----EAAEFFSRV 385
Query: 276 EQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
E L SL S EGTG++ + D+D +A D S
Sbjct: 386 ETQLDSLA-ESNCEGTGSSEEEQDQDTSCPEAEEIDPS---------------------- 422
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++LKH+L + Y + D+R+E ++ + GKLP + L WW+ H KWPYP+
Sbjct: 423 ---DKQLKHQLLRKYGGSLGDLRQEFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 476
>gi|285804239|gb|ADC35600.1| class I KNOX homeobox transcription factor STM-like 2 [Prunus
persica]
Length = 383
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL++++ C ++ P + + R++ A S + + + +G G + +D
Sbjct: 124 KAKIMAHPHYHRLLASYINCQKVGAPPEVVARLERACA-SAASIGQMMSSSSGSGCLGED 182
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE----GTG 292
LDQFM Y +L ++++L + + EA++ IE ++LT S + G G
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSDSAVCGDG 238
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
+ E++VD + N D P +R ELK +L + Y
Sbjct: 239 LDRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSG 275
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E +++R+ GKLP + L WW H KWPYP+ S
Sbjct: 276 YLGSLKQEFMKERKKGKLPKEARQQLLDWWSRHYKWPYPSES 317
>gi|4589880|dbj|BAA76903.1| homeobox 9 [Nicotiana tabacum]
Length = 322
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 118/254 (46%), Gaps = 29/254 (11%)
Query: 144 SENMNNASTNNKSEGVVVESGADGVVNWQ-----NARYKAEILSHPLYEQLLSAHVACLR 198
S NM+ A + +VV+ N Q +A+I SHPLY +LL ++ C +
Sbjct: 43 SGNMSWACPETSAANLVVDKSGTSSSNLQLEDHPETDIRAKISSHPLYPKLLRTYIDCHK 102
Query: 199 IATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQ 258
+ P D++ + + ++V + + L ++DD ELD FM Y +L FK L+
Sbjct: 103 VGAPSDEI----VDMLDNINIVHE-NDLSRRSNRLSDDSELDAFMETYCDVLAKFKSDLE 157
Query: 259 QHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPD 318
+ EA +IE L +L +P T + +SD+ + + + D S G +
Sbjct: 158 RPFN----EATTFLNDIETQLTNLC-AAPAT-TISNISDEGAAGTEEEEEVADTSGGGGN 211
Query: 319 TMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVL 378
T + M R E+K +L + Y I +++E +K + GKLP + +L
Sbjct: 212 T-------------NDMCRSENEIKDKLMRKYSGYISSLKQEFSKKNKKGKLPREARQIL 258
Query: 379 KSWWQSHSKWPYPT 392
+WW +H KWPYPT
Sbjct: 259 LNWWTTHYKWPYPT 272
>gi|188528488|emb|CAD58394.2| putative knotted-1-like protein [Helianthus tuberosus]
Length = 348
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 42/236 (17%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA------- 225
N+ KA+I+SHP Y +LLSA++ C +I P + + R++ S V++ S+
Sbjct: 74 NSNVKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRAS--VMAAMSSRSGSDGA 131
Query: 226 ------LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSL 279
G +V D LDQFM Y +L ++++L + + EA++ +E
Sbjct: 132 GTSGGGAGMSSSIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRMESQF 187
Query: 280 QSLTGVSPGEGTGATMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLME 336
+++T + G G D + E+++D D N G + P +R
Sbjct: 188 KAITFSNSDSGCGEGGMDRNGSSEEELDVDMN------------NNGMVDPQAEDR---- 231
Query: 337 RVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 232 ----ELKGQLLRKYSGYLGSLKQEFMKKRKEGKLPKEARQQLLDWWTRHYKWPYPS 283
>gi|85543290|gb|ABC71525.1| KNOTTED1 homeodomain protein [Sorghum bicolor]
Length = 348
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 120/255 (47%), Gaps = 32/255 (12%)
Query: 139 LKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLR 198
L+ AN ++ +A N K++G E + KA+I+SHP Y LL+A++ C +
Sbjct: 65 LQLANGGSLLDACVNVKAKG---EPSSSSPYAGDLEAIKAKIISHPHYYSLLAAYLECKK 121
Query: 199 IATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQL 257
+ P P + A+L A +Q + ++ +G G T+ ELDQFM Y +L FKE+L
Sbjct: 122 VGAP----PDVSARLTAMAQELEARQRTALSGLGAATEP-ELDQFMEAYHEMLVKFKEEL 176
Query: 258 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGP 317
+ ++ EA+ +E L SL+ + +EDQ S G E P
Sbjct: 177 TRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSG-----GETELP 227
Query: 318 DTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSV 377
+ G V QELKH L + Y + +++E+ +K + GKLP +
Sbjct: 228 EVDVHG--------------VDQELKHHLLKKYSGYLSSLKQELSKKMKKGKLPREARQQ 273
Query: 378 LKSWWQSHSKWPYPT 392
SWW H KWPYP+
Sbjct: 274 HLSWWDLHYKWPYPS 288
>gi|358249166|ref|NP_001239748.1| uncharacterized protein LOC100803095 [Glycine max]
gi|255639822|gb|ACU20204.1| unknown [Glycine max]
Length = 311
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 99/216 (45%), Gaps = 22/216 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HPLY LLSA++ C ++ P +L + ++ + H ++ +G G
Sbjct: 60 KIQIANHPLYPDLLSAYIECQKVGAP-PELACLLEEIGRESHRMNARREIGEG------- 111
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD FM + +L +KE+L + EA + ++E L +L + + +
Sbjct: 112 PELDHFMETFCQVLHRYKEELSRPFN----EATLFLGDMESQLSNLCNETLTKSSDNNNR 167
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D+ S+ L G +E + P++ Q LK L + Y
Sbjct: 168 SDEVASGASEEELSCGEMEAFEDNVSSVTCPSD----------QRLKEMLLRKYSGHFSG 217
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R+E L++R+ GKLP D L WW +H +WPYPT
Sbjct: 218 LRKEFLKRRKKGKLPKDARMALMGWWNTHHRWPYPT 253
>gi|222625875|gb|EEE60007.1| hypothetical protein OsJ_12748 [Oryza sativa Japonica Group]
Length = 341
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 50/237 (21%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
+G V +GA+ V KAEI+SHP Y LL+A++ C ++ P D L ++ A A
Sbjct: 71 QGQVSPAGAEAAV-------KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQ 123
Query: 217 QHVVSKYSALGAGQGLVTDDKE-LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 275
Q + + DD + LDQFM Y +L ++E+L++ + +EA +
Sbjct: 124 QLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRV 179
Query: 276 EQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
E L SL S EGTG++ +E+Q SD
Sbjct: 180 ETQLDSLA-ESNCEGTGSS----EEEQDPSD----------------------------- 205
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++LKH+L + Y + D+R+ ++ + GKLP + L WW+ H KWPYP+
Sbjct: 206 ----KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 258
>gi|115455613|ref|NP_001051407.1| Os03g0771500 [Oryza sativa Japonica Group]
gi|122246824|sp|Q10ED2.1|KNOS8_ORYSJ RecName: Full=Homeobox protein knotted-1-like 8; AltName:
Full=Homeobox protein OSH43
gi|5103727|dbj|BAA79225.1| knotted1-type homeobox protein OSH43 [Oryza sativa]
gi|108711297|gb|ABF99092.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113549878|dbj|BAF13321.1| Os03g0771500 [Oryza sativa Japonica Group]
Length = 341
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 109/237 (45%), Gaps = 50/237 (21%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
+G V +GA+ V KAEI+SHP Y LL+A++ C ++ P D L ++ A A
Sbjct: 71 QGQVSPAGAEAAV-------KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQ 123
Query: 217 QHVVSKYSALGAGQGLVTDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 275
Q + + DD +LDQFM Y +L ++E+L++ + +EA +
Sbjct: 124 QLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRV 179
Query: 276 EQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
E L SL S EGTG++ +E+Q SD
Sbjct: 180 ETQLDSLA-ESNCEGTGSS----EEEQDPSD----------------------------- 205
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++LKH+L + Y + D+R+ ++ + GKLP + L WW+ H KWPYP+
Sbjct: 206 ----KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 258
>gi|224122928|ref|XP_002318951.1| predicted protein [Populus trichocarpa]
gi|222857327|gb|EEE94874.1| predicted protein [Populus trichocarpa]
Length = 258
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 102/222 (45%), Gaps = 36/222 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HP Y L+SA+V C ++ P + + ++ + + + ++ +GA D
Sbjct: 13 KTQIANHPRYPDLVSAYVECRKVGAPPEMVSLLE-DIGRCSYQINTCYEIGA-------D 64
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA IE L SL +GT +
Sbjct: 65 PELDEFMESYCEVLHRYKEELSKPFD----EATTFLSSIESQLSSLC-----KGTLTKIF 115
Query: 297 D---DDEDQVDSDANLFDGSLEG---PDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
D DE S+ L G +E P ++GF Q LK L Y
Sbjct: 116 DYGSADEPAWTSEEELSCGEVEASEIPGSLGF-------------HSSDQNLKGVLLSKY 162
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E L++R+ GKLP D ++L WW H +WPYPT
Sbjct: 163 SGHLSSLRKEFLKQRKKGKLPKDAKTLLLDWWNHHYRWPYPT 204
>gi|54042995|gb|AAV28488.1| homeodomain protein ARBORKNOX1 [Populus tremula x Populus alba]
Length = 361
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A S S A G + +D
Sbjct: 110 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACA------SAASMAPANTGCIGED 163
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G G G
Sbjct: 164 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTVSSPISGCGDGND 219
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E++VD + N D E QELK +L + Y +
Sbjct: 220 RNVSSEEEVDVNNNFIDPQAE-----------------------DQELKGQLLRRYSGYL 256
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 257 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 296
>gi|55276120|gb|AAV49801.1| homeobox transcription factor KN2 [Populus trichocarpa x Populus
deltoides]
Length = 373
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A + + A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------ANTGCIGED 175
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G G G
Sbjct: 176 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPISGCGDGND 231
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E++VD + N D E QELK +L + Y +
Sbjct: 232 RNVSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRRYSGYL 268
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 269 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 308
>gi|300676315|gb|ADK26527.1| HERMIT-like protein 1 [Petunia x hybrida]
Length = 322
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 104/220 (47%), Gaps = 29/220 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
+A I SHPLY +LL +++ C ++ P + + +D + Q V K S +TDD
Sbjct: 78 RANISSHPLYPKLLRSYIDCQKVGAPSEIVNMLD-NIVQENDVYKKSST---ALNRLTDD 133
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L FK L + EA + IE L +L ++ T S
Sbjct: 134 PELDEFMETYCEVLAKFKSDLARPFN----EATIFLNNIETQLSNL-WINAAPTTSNITS 188
Query: 297 DD--DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQ-ELKHELKQGYKEK 353
D+ E + ++D DG E++ + + R+ E+K +L + Y
Sbjct: 189 DELGAEPEEENDITGADG----------------EADEKINDMCRESEIKDKLMRKYSGY 232
Query: 354 IVDIREEILRKR-RAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I +++E+ K + GKLP + +L +WW H KWPYPT
Sbjct: 233 IRSLKQEVCNKNNKKGKLPKEARQILLNWWTCHYKWPYPT 272
>gi|345649241|gb|AEO14151.1| STM1 protein [Eschscholzia californica subsp. californica]
Length = 362
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 31/218 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
+A+I++HP Y +LL+++V C ++ P P + A+L ++ + G+G G + +D
Sbjct: 111 RAKIMAHPYYTRLLASYVNCQKVGAP----PEVVAKLEEANATGEAMARTGSGTGCIGED 166
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + EA+M IE ++LT G +
Sbjct: 167 PALDQFMEAYCEMLTKYQQELTKPFE----EAMMFLSRIECQFKALTVSDSVGGEAVNRN 222
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
++ +D++ N D P +R ELK +L + Y +
Sbjct: 223 GSSDEDIDANDNYID---------------PQAEDR--------ELKGQLLRKYSGYLGS 259
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E L+KR+ GKLP + L WW H KWPYP+ S
Sbjct: 260 LKQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 297
>gi|224115894|ref|XP_002317151.1| predicted protein [Populus trichocarpa]
gi|222860216|gb|EEE97763.1| predicted protein [Populus trichocarpa]
Length = 310
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A + + A G + +D
Sbjct: 59 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------ANTGCIGED 112
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G G G
Sbjct: 113 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPISGCGDGND 168
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E++VD + N D E QELK +L + Y +
Sbjct: 169 RNVSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRRYSGYL 205
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 206 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 245
>gi|85543302|gb|ABC71531.1| KNOTTED1-like homeodomain protein [Leersia virginica]
Length = 360
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G G T+
Sbjct: 111 KAKIISHPHYSSLLAAYLDCQKVGAPPEVAARL-AAVAQDLELRQR-TALG-GLGAATE- 166
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L +L+ +
Sbjct: 167 PELDQFMEAYQEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSSG 222
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L Y +
Sbjct: 223 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLNKYSGYLSS 263
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ G+LP D L SWW+ H KWPYP+ S
Sbjct: 264 LKQELSKKKKKGELPKDARQQLLSWWELHCKWPYPSES 301
>gi|242033395|ref|XP_002464092.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
gi|241917946|gb|EER91090.1| hypothetical protein SORBIDRAFT_01g012200 [Sorghum bicolor]
Length = 334
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 98/216 (45%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHPLY LL A + C ++ P + + R+ A LA + S Q D
Sbjct: 65 KAKIMSHPLYPALLRAFIDCRKVGAPPETVGRLSA-LADEVEMNSDDR-----QEQRPAD 118
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++++L + ++ EA +E + S + G G S
Sbjct: 119 PELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFRSMEAQIDSFSLDDNGYEEGGGSS 174
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D+DE + G L G +P +E +ELK L Y +
Sbjct: 175 DEDEQET--------GDLGG---------LPVPAETGSPSGEDKELKSRLLNKYSGYLSS 217
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ E+ RK++ GKLP D L WWQ H +WPYP+
Sbjct: 218 LWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 253
>gi|85543298|gb|ABC71529.1| KNOTTED1 homeodomain protein [Chasmanthium latifolium]
Length = 334
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTD 235
KA+I+SHP Y LL+A++ C ++ P P + A+L A +Q + ++ G G T+
Sbjct: 85 KAKIISHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTAFGGLGNATE 140
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 141 -PELDQFMEAYHEMLVKFREELTRPLQ----EALEFMRRVESQLNSLSISGRSLRNILSS 195
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 196 GSSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLS 236
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ G LP + L SWW H KWPYP+
Sbjct: 237 SLKQELSKKKKKGTLPKEARQQLLSWWDLHYKWPYPS 273
>gi|255554765|ref|XP_002518420.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223542265|gb|EEF43807.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 353
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 109/224 (48%), Gaps = 37/224 (16%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGL 232
A KA+I++HP Y +LL+A++ C ++ P + + R++ A + + +G AG
Sbjct: 99 ASVKAKIMAHPHYHRLLAAYINCQKVGAPPEVVTRLEEACASA-------ATMGQAGTSC 151
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--G 290
+ +D LDQFM Y +L ++++L + + EA++ +E ++LT SP G
Sbjct: 152 IGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLQRVECQFKALTVASPNSALG 207
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+ + E++VD + N D E QELK +L + Y
Sbjct: 208 EASDRNGSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRRY 244
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 245 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 288
>gi|356504010|ref|XP_003520792.1| PREDICTED: homeobox protein knotted-1-like 1-like [Glycine max]
Length = 307
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 121/270 (44%), Gaps = 41/270 (15%)
Query: 135 ESADLKNANSENMNNASTNNKS--------EGVVVESGADGVVNWQNARYKAEILSHPLY 186
E + NA + M ST N + V ES +D + K +I +HPLY
Sbjct: 17 EVVRVGNATTSEMRVGSTANCCYLQLEAPQQNNVTESSSD----MSDRMIKIQIANHPLY 72
Query: 187 EQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHY 246
LLSA++ C ++ P +L + ++ + H ++ + G ELD FM +
Sbjct: 73 PDLLSAYIECQKVGAP-PELACLLEEIGRESHRMNARREIVEG-------PELDHFMETF 124
Query: 247 VLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSD 306
+L +KE+L + EA + ++E L +L G T ++ +++ D+V S
Sbjct: 125 CEVLHRYKEELSRPFN----EATLFLGDMESQLSNLCN---GTLTKSSDNNNRSDEVASG 177
Query: 307 AN---LFDGSLEG-PDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL 362
A+ L G +E D + P++ Q LK L + Y +R+E L
Sbjct: 178 ASEEELSCGEMEAFEDHVSSSVTCPSD----------QRLKEMLLRKYSGHFSGLRKEFL 227
Query: 363 RKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++R+ GKLP D L WW +H +WPYPT
Sbjct: 228 KRRKKGKLPKDARIALMDWWNTHHRWPYPT 257
>gi|50872441|gb|AAT85041.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
gi|108711298|gb|ABF99093.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215741530|dbj|BAG98025.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 336
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 107/237 (45%), Gaps = 55/237 (23%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
+G V +GA+ V KAEI+SHP Y LL+A++ C ++ P D L ++ A A
Sbjct: 71 QGQVSPAGAEAAV-------KAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQ 123
Query: 217 QHVVSKYSALGAGQGLVTDDK-ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEI 275
Q + + DD +LDQFM Y +L ++E+L++ + +EA +
Sbjct: 124 QLDEADGHPRRRHEPQRDDDPDQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSRV 179
Query: 276 EQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
E L SL GTG++ +E+Q SD
Sbjct: 180 ETQLDSLA------GTGSS----EEEQDPSD----------------------------- 200
Query: 336 ERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++LKH+L + Y + D+R+ ++ + GKLP + L WW+ H KWPYP+
Sbjct: 201 ----KQLKHQLLRKYGGSLGDLRQVFSKRTKKGKLPKEARQKLLHWWELHYKWPYPS 253
>gi|149389446|gb|ABR26246.1| transcription factor STM1 [Euphorbia esula]
Length = 376
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 126/283 (44%), Gaps = 47/283 (16%)
Query: 126 ANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARY--------- 176
+++S+ + S N N NN ST S ++++ + N A Y
Sbjct: 61 SSNSLFLPLPSPHPPNQEHHNRNNTSTTGGSSSMIIDDHNNTNSNSNTACYFMDTNTSTT 120
Query: 177 ---KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
KA+I++HP Y +LL+A++ C ++ P P I A+L ++ S + +G +
Sbjct: 121 ASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEA--CASAATMGPSGTSCL 174
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
+D LDQFM Y +L ++++L + + EA++ +E ++LT SP
Sbjct: 175 GEDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESHFKALTVSSPHSACAE 230
Query: 294 T--MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
+ E++VD + N D E ELK +L + Y
Sbjct: 231 ANDRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYS 267
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +R+E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 268 GHLCSLRKEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 310
>gi|110340603|gb|ABG67974.1| STM protein [Kalanchoe daigremontiana]
Length = 249
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 101/217 (46%), Gaps = 36/217 (16%)
Query: 181 LSHPLYEQLLSAHVACLRIATP---VDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDK 237
+SHP Y +L++A+V C ++ P V++L R A L S++ G G + +D
Sbjct: 1 MSHPHYHRLVAAYVNCQKVGAPPEVVEKLERACAGL----------SSITTGSGRLGEDP 50
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSD 297
LDQFM Y +L ++ +L + + EA+ IE ++LT S + S
Sbjct: 51 GLDQFMEAYCEMLTKYELELSKPFK----EAMAFLSRIESQFKALTLSSSSDSPAYGQSS 106
Query: 298 DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI 357
D D D ++ + LI ++E +ELK +L + Y +
Sbjct: 107 DGNGSSDEDVDVHND------------LIDPQAED-------RELKGQLLRKYSGYPGSL 147
Query: 358 REEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
++E +++R+ GKLP + L WW H KWPYP+ S
Sbjct: 148 KQEFMKRRKKGKLPKEARQQLLDWWTRHYKWPYPSES 184
>gi|118482378|gb|ABK93112.1| unknown [Populus trichocarpa]
Length = 285
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 107/220 (48%), Gaps = 35/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A + + A G + +D
Sbjct: 34 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------ANTGCIGED 87
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G G G
Sbjct: 88 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRVECQFKALTLSSPISGCGDGND 143
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E++VD + N D E QELK +L + Y +
Sbjct: 144 RNVSSEEEVDVNNNFIDPQAED-----------------------QELKGQLLRRYSGYL 180
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 181 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 220
>gi|388512137|gb|AFK44130.1| unknown [Lotus japonicus]
Length = 299
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 107/219 (48%), Gaps = 31/219 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++I SHPLY L+SA++ C ++ P + P ++ ++A+ H S G G+ + DD
Sbjct: 57 KSQIASHPLYPNLVSAYIECQKVGAPTELAPFLE-EIARENHNSSN----GFGRE-IGDD 110
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y C ++ QQ + EA + +IE L L +GT S
Sbjct: 111 PELDEFMESY----CEVLQRYQQELFKPFNEATLFLCDIESQLSELC-----KGTLTMPS 161
Query: 297 DD---DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
D+ DE S+ L G +E + G M + QELK L + Y
Sbjct: 162 DNNRSDEAAGTSEDELSCGKVEAVEYSG-------------MRQGDQELKEMLLRKYGGY 208
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 209 LSSLRKEFLKKRKKGKLPKDARKTLTDWWNTHYRWPYPT 247
>gi|194703086|gb|ACF85627.1| unknown [Zea mays]
gi|414871974|tpg|DAA50531.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 352
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 126/294 (42%), Gaps = 39/294 (13%)
Query: 102 QWLSRTSSSLLHRNHSDVIDDVTP---ANDSIIAAVESADLKNANSENMNNASTNNKSEG 158
+WL+R L TP A D AA S+ A + + A+ ++ S
Sbjct: 16 RWLARMEKQLPALTGGSKAATTTPFYLALDHRAAATSSSPPAEAPTLPPSAAAVSDPSRQ 75
Query: 159 VVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQH 218
+ G++ + KA+I+SHPLY LL A + C ++ P++ + R+ A LA
Sbjct: 76 SNSDRGSEII--------KAKIMSHPLYPALLRAFIDCRKVGAPLEIVGRLSA-LADDVE 126
Query: 219 VVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQS 278
S Q D ELDQFM Y +L ++++L + ++ EA +E
Sbjct: 127 TNSD-----GRQEEQPADPELDQFMEIYCHMLVRYRQELTRPIQ----EADEFFKSMEAQ 177
Query: 279 LQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERV 338
+ S + G G SD+DE + T+ G L E+ E
Sbjct: 178 IDSFSLDDNGYEEGGGSSDEDEQE----------------TVDLGGLPVPETGSPSGEG- 220
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK+ L Y + + E+ RK++ GKLP D L WWQ H +WPYP+
Sbjct: 221 -KELKNHLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 273
>gi|149389448|gb|ABR26247.1| transcription factor STM4 [Euphorbia esula]
Length = 370
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 124/281 (44%), Gaps = 47/281 (16%)
Query: 128 DSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARY----------- 176
+S+ + S N N NN ST S ++++ + N A Y
Sbjct: 57 NSLFLPLPSPHPPNQEHHNRNNTSTTGGSSSMILDDHNNTNSNSNTACYFMDTNTSTTAS 116
Query: 177 -KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD 235
KA+I++HP Y +LL+A++ C ++ P P I A+L ++ S + +G + +
Sbjct: 117 VKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEA--CASAATMGPSGTSCLGE 170
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT- 294
D LDQFM Y +L ++++L + + EA++ +E ++LT SP
Sbjct: 171 DPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALTVSSPHSACAEAN 226
Query: 295 -MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+ E++VD + N D E ELK +L + Y
Sbjct: 227 DRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYSGH 263
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +R+E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 264 LCSLRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 304
>gi|3426304|gb|AAC32262.1| Knox class 1 protein [Pisum sativum]
gi|3462612|gb|AAC33008.1| knotted1-like class I homeodomain protein [Pisum sativum]
Length = 371
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 36/223 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL A++ C ++ P + + R++ A + + G G + +D
Sbjct: 115 KAKIMAHPHYHRLLEAYINCQKVGAPSEVVTRLEEACASA----VRMGGDAVGSGCIGED 170
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + ++ EA++ IE ++LT S +
Sbjct: 171 PALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTVSSSSDNIACNEG 226
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
D +EDQVD N+ D P +R ELK +L + Y
Sbjct: 227 GDRNGSSEEDQVDLYNNMID---------------PQAEDR--------ELKGQLLRKYS 263
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 264 GYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 306
>gi|55416167|gb|AAV50045.1| homeobox protein [Saccharum hybrid cultivar Pindar]
Length = 315
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 104/221 (47%), Gaps = 33/221 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P P++ + L + V + S AG G + D
Sbjct: 41 KAQIASHPRYPSLLSAYIECRKVGAP----PQVASLL---EEVSRERSPGAAGAGEIGVD 93
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA I+ L +L AT S
Sbjct: 94 PELDEFMDSYCRVLVRYKEELSRPFD----EAASFLSSIQAQLSNLCSAGSSPAATATHS 149
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
DD +++Q D ++ P I E L + ELK L + Y
Sbjct: 150 DDMMGSSEDEQCSGDTDV--------------PDIGQEHSSRLAD---HELKEMLLKKYS 192
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D +VL WW +H +WPYPT
Sbjct: 193 GCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 233
>gi|164454387|dbj|BAF96740.1| knotted-like homeobox transcription factor MKN4 [Physcomitrella
patens]
Length = 495
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 21/232 (9%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRID---AQLAQSQHVVSKYSALGAGQGLVTDD 236
I+ HPLY +L+ AH++ +I P L ++D + + Q+ S ++ L + D
Sbjct: 224 IVDHPLYPELVVAHISIFKIGAPKGLLIKLDEMEKKFQRFQYGESSWNVLHVTK--FGQD 281
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LD FM Y+ LL F+E L+ A ++E +P
Sbjct: 282 PSLDFFMRSYIDLLTKFREDLENPYNKFAQYKDKVTKDLEDLCGHYIETTP--------- 332
Query: 297 DDDEDQVDSDANLFDGS--LEGPDTMGFGPLIPT-ESERSLM---ERVRQELKHELKQGY 350
D+ED SD D S L + +G L+ T + + S++ + +ELK L+ Y
Sbjct: 333 -DEEDNFGSDIGTKDMSQDLNDLEILGEENLMYTADIDESIVIDPDAADEELKKMLRLKY 391
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLLLRF 402
+ I ++ E R R+ GKLP + +LK W+ HS WPYP+ L R
Sbjct: 392 GKHIAGLKAEFNRVRKKGKLPTNARQILKDWFSRHSYWPYPSEMEKAYLQRL 443
>gi|14456343|gb|AAK62559.1|AF284817_1 class 1 KNOTTED1-like protein MKN4 [Physcomitrella patens]
Length = 488
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 104/232 (44%), Gaps = 21/232 (9%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRID---AQLAQSQHVVSKYSALGAGQGLVTDD 236
I+ HPLY +L+ AH++ +I P L ++D + + Q+ S ++ L + D
Sbjct: 217 IVDHPLYPELVVAHISIFKIGAPKGLLIKLDEMEKKFQRFQYGESSWNVLHVTK--FGQD 274
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LD FM Y+ LL F+E L+ A ++E +P
Sbjct: 275 PSLDFFMRSYIDLLTKFREDLENPYNKFAQYKDKVTKDLEDLCGHYIETTP--------- 325
Query: 297 DDDEDQVDSDANLFDGS--LEGPDTMGFGPLIPT-ESERSLM---ERVRQELKHELKQGY 350
D+ED SD D S L + +G L+ T + + S++ + +ELK L+ Y
Sbjct: 326 -DEEDNFGSDIGTKDMSQDLNDLEILGEENLMYTADIDESIVIDPDAADEELKKMLRLKY 384
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLLLRF 402
+ I ++ E R R+ GKLP + +LK W+ HS WPYP+ L R
Sbjct: 385 GKHIAGLKAEFNRVRKKGKLPTNARQILKDWFSRHSYWPYPSEMEKAYLQRL 436
>gi|290796115|gb|ADD64787.1| SHOOT MERISTEMLESS [Brassica napus]
Length = 382
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 133/289 (46%), Gaps = 45/289 (15%)
Query: 113 HRNHSDVI--DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
H HS ++ +TP + V S+ ++ + + N+++E + A G+
Sbjct: 61 HHQHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQNELL-----AGGLNP 115
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
+A KA+I+ HP Y +LL +V C ++ P P + A+L ++ + +A
Sbjct: 116 CSSASVKAKIMGHPHYHRLLLTYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPT 171
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--- 287
G + +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP
Sbjct: 172 GSLGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSF 227
Query: 288 -GEGTGATMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
G G A +++ E++VD + D P +R ELK
Sbjct: 228 SGYGEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELK 264
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+L + Y + +++E ++KR+ G+LP + L WW H KWPYP+
Sbjct: 265 GQLLRKYSGYLGSLKQEFMKKRKKGELPKEARQQLLDWWSRHYKWPYPS 313
>gi|242052735|ref|XP_002455513.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
gi|241927488|gb|EES00633.1| hypothetical protein SORBIDRAFT_03g012480 [Sorghum bicolor]
Length = 294
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 103/221 (46%), Gaps = 32/221 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P P++ + L + + GAG G + D
Sbjct: 39 KAQIASHPRYPSLLSAYIECRKVGAP----PQVASLLEEVSR--DRERRPGAGAGEIGVD 92
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA I+ L +L AT S
Sbjct: 93 PELDEFMDSYCRVLVRYKEELSRPFD----EAASFLSSIQAQLSNLCSAGSSPAATATHS 148
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
DD +++Q D ++ P I E L + ELK L + Y
Sbjct: 149 DDMMGSSEDEQCSGDTDV--------------PDIGQEHSSRLAD---HELKEMLLKKYS 191
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D +VL WW +H +WPYPT
Sbjct: 192 GCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 232
>gi|258958638|gb|ACV88386.1| class I knox protein [Fragaria x ananassa]
Length = 330
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 98/217 (45%), Gaps = 20/217 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HP Y L+SA++ C ++ P P I + L + + S + + D
Sbjct: 65 KTQIANHPRYPDLVSAYIDCQKVGAP----PEIKSLLEEVGRLSFPTSTC---RSEIGAD 117
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L ++KE+L + V EA IE L L +GT +
Sbjct: 118 PELDEFMDTYCGVLHTYKEELSKPVD----EATTFLNNIELQLSDLC-----KGTFQKNN 168
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTES-ERSLMERVRQELKHELKQGYKEKIV 355
D + V GS E +G + E + S +ELK L Y +
Sbjct: 169 CDLQAAVPLPDEAVGGSEE---EFSYGEMEAAEGQDTSAFRACDRELKDMLLHKYSGYLG 225
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++++ L+ R+ GKLP D S L WW +H +WPYPT
Sbjct: 226 KLKKDFLKSRKKGKLPKDARSALMDWWNTHYRWPYPT 262
>gi|165855683|gb|ABY67935.1| shoot meristemless STM3 [Euphorbia esula]
Length = 297
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 118/262 (45%), Gaps = 49/262 (18%)
Query: 146 NMNNASTNNKSEGVVVESGADGVVNWQNARY------------KAEILSHPLYEQLLSAH 193
N NN ST S ++++ + N A Y KA+I++HP Y +LL+A+
Sbjct: 70 NRNNTSTTGGSSSMILDDHNNTNSNSNTACYFMDTNTSTTASVKAKIMAHPHYHRLLAAY 129
Query: 194 VACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTDDKELDQFMTHYVLLLCS 252
+ C ++ P P I A+L + + + +G +G + +D LDQFM Y +L
Sbjct: 130 INCQKVGAP----PEIAARL---EEACASAATMGPSGTSCLGEDPALDQFMEAYCEMLTK 182
Query: 253 FKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT--MSDDDEDQVDSDANLF 310
++++L + + EA++ +E ++LT SP + E++VD + N
Sbjct: 183 YEQELFKPFK----EAMLFLQRVESQFKALTVSSPHSACAEANDRNGSSEEEVDVNNNFI 238
Query: 311 DGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKL 370
D E ELK +L + Y + +R+E ++KR+ GKL
Sbjct: 239 DPQAED-----------------------HELKGQLLRKYSGHLCSLRQEFMKKRKKGKL 275
Query: 371 PGDTTSVLKSWWQSHSKWPYPT 392
P + L WW H KWPYP+
Sbjct: 276 PKEARQQLLDWWSRHYKWPYPS 297
>gi|300174946|dbj|BAJ10708.1| shoot meristemless ortholog [Cladopus doianus]
Length = 352
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 121/247 (48%), Gaps = 32/247 (12%)
Query: 149 NASTNNKSEGVV-VESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLP 207
NA+ N+ G VE+ +N KA+I+SHP Y +LL A+V C +I P P
Sbjct: 72 NATANSTGAGCFFVENNVHEGIN-TTCSIKAKIMSHPHYNRLLLAYVNCQKIGAP----P 126
Query: 208 RIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAME 267
+ A+L +++ V+ +ALG + D LDQFM Y +L ++++L + ++ E
Sbjct: 127 EVVARLEEAR--VAAAAALGPSDSCLGQDPALDQFMEAYCEMLTKYEQELSKPLK----E 180
Query: 268 AVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIP 327
A++ +E ++LT SP G + +E SD EG G I
Sbjct: 181 AMVFLQRVEYQFKALTVSSPNSGYSG---EANERNASSDE-------EGD---GNNVFID 227
Query: 328 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSK 387
++E QELK +L + Y + +++E ++KR+ GKLP + L WW H K
Sbjct: 228 PQAED-------QELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYK 280
Query: 388 WPYPTVS 394
WPYP+ S
Sbjct: 281 WPYPSES 287
>gi|413933450|gb|AFW68001.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 328
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 104/232 (44%), Gaps = 59/232 (25%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHPLY +L A + C ++ P + +V + SAL + +DD
Sbjct: 60 KAKIMSHPLYPAVLRAFIDCRKVGAPPE--------------IVGRLSALADDVEMNSDD 105
Query: 237 K---------ELDQFMTHYVLLLCSFKEQLQQHVR-----VHAMEAVMACWEIEQSLQSL 282
K ELDQFM Y +L ++++L + ++ +MEA + + SL
Sbjct: 106 KQEQRRAADPELDQFMEIYCHMLVRYRQELTRPIQEADEFFRSMEAQIDAF-------SL 158
Query: 283 TGVSPGEGTGATMSDDDEDQVDSDA--NLFDGSLEGPDTMGFGPLIPTESERSLMERVRQ 340
+ EG G++ +D+++ VD L GS G D
Sbjct: 159 LDDNGYEGCGSS-DEDEQEAVDLGGLSVLETGSPSGEDN--------------------- 196
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK+ L Y + ++ E+ RK++ GKLP D L WWQ H +WPYP+
Sbjct: 197 ELKNRLLNKYSGYLSNLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 248
>gi|225450589|ref|XP_002277931.1| PREDICTED: homeobox protein knotted-1-like 1 [Vitis vinifera]
gi|147820996|emb|CAN77695.1| hypothetical protein VITISV_015614 [Vitis vinifera]
gi|296089776|emb|CBI39595.3| unnamed protein product [Vitis vinifera]
Length = 310
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 116/239 (48%), Gaps = 31/239 (12%)
Query: 155 KSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 214
+ E V E+G ++ K++I++HP Y L+SA++ C ++ P + ++
Sbjct: 37 RFESVETEAGMSDLI-------KSQIVNHPRYPNLVSAYIECRKVGAPPEMASLLEEIGR 89
Query: 215 QSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 274
+SQ + S+ +GA D ELD+FM Y +L +KE+L + EA +
Sbjct: 90 ESQPMNSRSGEIGA-------DPELDEFMESYCEVLHRYKEELSKPFD----EATSFLSD 138
Query: 275 IEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSL 334
IE L +L + GT + D E S+ L G E +ES+ SL
Sbjct: 139 IESQLSNLCKGALTAGTSGSYYSD-EAAGTSEEELSCGEAE-----------VSESQESL 186
Query: 335 MER-VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
R QELK L + Y + +R+E L+KR+ GKLP D ++L WW +H +WPYPT
Sbjct: 187 GARPGDQELKEMLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTMLLEWWNTHYRWPYPT 245
>gi|218193821|gb|EEC76248.1| hypothetical protein OsI_13687 [Oryza sativa Indica Group]
Length = 357
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 104/225 (46%), Gaps = 37/225 (16%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS----KYSALGA 228
A KAEI+SHP LL+A++ C ++ P D L ++ A A Q + +
Sbjct: 78 EAAMKAEIMSHPQCSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEP 137
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
+ D +LDQFM Y +L ++E+L++ + +EA +E L S+ S
Sbjct: 138 RRDDDVPDHQLDQFMDAYCSMLTRYREELERPI----LEAAEFFSMVETQLDSIA-ESNC 192
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EGTG+ S++++D +A D S ++LKH+L
Sbjct: 193 EGTGS--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLM 225
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH-SKWPYPT 392
Y + D+R+E ++ + GKLP + L WW+ H KWPYP+
Sbjct: 226 KYGGSLGDLRQEFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPS 270
>gi|20977642|gb|AAM28231.1| knotted-1-like protein 1 [Helianthus annuus]
Length = 362
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 109/230 (47%), Gaps = 43/230 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG----- 231
KA+I+SHP Y +LLSA++ C +I P + + R++ S VV+ S+ G G
Sbjct: 95 KAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRAS--VVAAMSSCSGGAGTSDGS 152
Query: 232 ------LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL--- 282
++ D LDQFM Y +L ++++L + + EA++ IE +++
Sbjct: 153 GGGMNMIIGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISIS 208
Query: 283 TGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQEL 342
T S G G + E++VD + NL D P +R EL
Sbjct: 209 TSDSAGGEGGMDKNGSSEEEVDVNNNLID---------------PQAEDR--------EL 245
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 246 KGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 295
>gi|165855677|gb|ABY67934.1| shoot meristemless STM2 [Euphorbia esula]
Length = 264
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
A KA+I++HP Y +LL+A++ C ++ P P I A+L ++ S + +G +
Sbjct: 10 ASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARLEEA--CASAATMGPSGTSCL 63
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
+D LDQFM Y +L ++++L + + EA++ +E ++LT SP
Sbjct: 64 GEDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALTVSSPHSACAE 119
Query: 294 T--MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
+ E++VD + N D E ELK +L + Y
Sbjct: 120 ANDRNGSSEEEVDVNNNFIDPQAED-----------------------HELKGQLLRKYS 156
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +R+E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 157 GHLCSLRQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 199
>gi|168011803|ref|XP_001758592.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
gi|162690202|gb|EDQ76570.1| KNOX class 1 protein MKN2 [Physcomitrella patens subsp. patens]
Length = 445
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 35/234 (14%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATP------VDQLPRIDAQLAQSQHVVSKYSA 225
Q+ +A I+ HP Y +++ AHV +I P +D+L + + H S
Sbjct: 178 QDLELRAAIIDHPFYPEMVLAHVRVFKIGAPRRLRRKLDELAKKFQRFQDCDHT----SK 233
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV 285
+G+ D ELD FM YV +L F E L++ +E+
Sbjct: 234 IGS-------DPELDHFMRSYVGVLTKFAEDLEEPFNKFIQFTDNTSKALEEICGHYVDT 286
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFD-GSLEGPDTMGFGP---LIPTESERSLM---ERV 338
+P DED D + G+ EG D G + P + + S++
Sbjct: 287 TP-----------DEDNCGFDIGPLEYGAQEGDDLDTLGDENVMYPLDIDESVIVDPMAS 335
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++K L++ Y I +++ E R R+ GKLP ++LK W+ HS WPYP+
Sbjct: 336 DEDIKKALRKKYGRHIGELKAEFNRVRKKGKLPTSARTILKDWFNRHSHWPYPS 389
>gi|225444460|ref|XP_002271944.1| PREDICTED: homeobox protein SBH1-like [Vitis vinifera]
Length = 361
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 104/220 (47%), Gaps = 35/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A +V G + +D
Sbjct: 109 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASEAAMVR------TGTSCIGED 162
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + + EA++ +E ++LT S G G
Sbjct: 163 PALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALTVSSSDSAGGEGLD 218
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E++VD + N D P +R ELK +L + Y +
Sbjct: 219 RNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSGYL 255
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 256 SSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 295
>gi|284468451|gb|ADB90285.1| KNOX [Fragaria vesca]
Length = 330
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 98/227 (43%), Gaps = 40/227 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HP Y L+SA++ C ++ P P I + L + + S + G D
Sbjct: 65 KTQIANHPRYPDLVSAYIDCQKVGAP----PEIKSLLEEVGRLSFPTSTCRSEIGA---D 117
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L ++KE+L + V EA IE L L +GT +
Sbjct: 118 PELDEFMDTYCGVLHTYKEELSKPVD----EATTFLNNIELQLSGLC-----KGTFQKNN 168
Query: 297 DD--------DEDQVDSDANLFDGSLE---GPDTMGFGPLIPTESERSLMERVRQELKHE 345
D DE S+ G +E G DT F +ELK
Sbjct: 169 CDLQAAVPLPDEAVGSSEEEFSYGEMEAAEGQDTSAF-------------RACDRELKDM 215
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L Y + ++++ L+ R+ GKLP D S L WW +H +WPYPT
Sbjct: 216 LLHKYSGYLGKLKKDFLKSRKKGKLPKDARSALMDWWNTHYRWPYPT 262
>gi|31745219|gb|AAP68879.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
Group]
Length = 353
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 108/232 (46%), Gaps = 42/232 (18%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS----KYSALGA 228
A KAEI+SHP Y LL+A++ C ++ P D L ++ A A Q + +
Sbjct: 78 EAAMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEP 137
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
+ D +LDQFM Y +L ++E+L++ + +EA E ++SL S
Sbjct: 138 RRDDDVPDHQLDQFMDAYCSMLTRYREELERPI----LEAA----EFFSLIRSLVN-SNC 188
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EGTG+ S++++D +A D S ++LKH+L
Sbjct: 189 EGTGS--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLM 221
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH-SKWPYPT-VSPVTL 398
Y + D+R+ ++ + GKLP + L WW+ H KWPYP+ V +TL
Sbjct: 222 KYGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTL 273
>gi|132424651|gb|ABO33478.1| class I KNOX homeobox transcription factor [Medicago truncatula]
Length = 374
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++I++HP Y +LL A++ C ++ P + + R++ A + G G + +D
Sbjct: 118 KSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACA----TAVRMGGDAVGSGCLGED 173
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + ++ EA++ IE ++LT S + +
Sbjct: 174 PALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTVSSSSDNIACSEG 229
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
D +ED VD N+ D P +R ELK +L + Y
Sbjct: 230 GDRNGSSEEDHVDLYNNMID---------------PQAEDR--------ELKGQLLRKYS 266
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 267 GYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 309
>gi|11037020|gb|AAG27464.1|AF308454_1 knotted class I homeodomain KNOX [Medicago truncatula]
Length = 381
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 105/223 (47%), Gaps = 36/223 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++I++HP Y +LL A++ C ++ P + + R++ A + G G + +D
Sbjct: 125 KSKIMAHPHYHRLLEAYINCQKVGAPSEVVARLEEACA----TAVRMGGDAVGSGCLGED 180
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + ++ EA++ IE ++LT S + +
Sbjct: 181 PALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRIEVQFKNLTVSSSSDNIACSEG 236
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
D +ED VD N+ D P +R ELK +L + Y
Sbjct: 237 GDRNGSSEEDHVDLYNNMID---------------PQAEDR--------ELKGQLLRKYS 273
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 274 GYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 316
>gi|300174956|dbj|BAJ10713.1| shoot meristemless ortholog [Weddellina squamulosa]
Length = 356
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 120/252 (47%), Gaps = 38/252 (15%)
Query: 149 NASTNNKSEG-VVVESGADGVVNWQN--ARYKAEILSHPLYEQLLSAHVACLRIATPVDQ 205
NAS+N+ G +++G D +N N KA+I+SHP Y +LLSA+V C ++ P
Sbjct: 72 NASSNSTPGGWFFMDAGTDEGINVANPLCSIKAKIMSHPHYTRLLSAYVNCQKVGAP--- 128
Query: 206 LPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 265
P + + + +ALG G + D LDQFM Y +L ++++L + ++
Sbjct: 129 -PEV-VARLEEARAAAAAAALGPAGGCIGQDPALDQFMEAYCEMLTKYEQELSKPLK--- 183
Query: 266 MEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD---EDQVDSDANLFDGSLEGPDTMGF 322
EA++ +E ++LT SP G ++ + E++ D + D
Sbjct: 184 -EAMLFLQRVEFQFKALTLSSPCSGYSGEANERNASSEEEGDGNNVFID----------- 231
Query: 323 GPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWW 382
P +R ELK +L + Y + +++E ++KR+ GKLP + L WW
Sbjct: 232 ----PQAEDR--------ELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 279
Query: 383 QSHSKWPYPTVS 394
H KWPYP+ S
Sbjct: 280 SRHYKWPYPSES 291
>gi|357115393|ref|XP_003559473.1| PREDICTED: homeobox protein KNOX3-like [Brachypodium distachyon]
Length = 429
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP+Y LL+A++ CL++ P P + +++ + G G +
Sbjct: 174 KAKIISHPIYPSLLAAYLDCLKVGAP----PEVSERMSAVARDLELRQRAGLGGLAAATE 229
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ +
Sbjct: 230 PELDQFMEAYSEMLVKYREELTRPLQ----EAMEFLRRVESQLNSLSINGRSLRNILSSG 285
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 286 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 326
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S
Sbjct: 327 LKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPYPSES 364
>gi|164454385|dbj|BAF96739.1| knotted1-like homeobox transcription factor MKN2 [Physcomitrella
patens]
Length = 410
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 99/230 (43%), Gaps = 27/230 (11%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID--AQLAQSQHVVSKYSALGAG 229
Q+ +A I+ HP Y +++ AHV +I P ++D A+ Q S +G+
Sbjct: 143 QDLELRAAIIDHPFYPEMVLAHVRVFKIGAPRRLRRKLDELAKKFQRFQDCDHTSKIGS- 201
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
D ELD FM YV +L F E L++ +E+ +P
Sbjct: 202 ------DPELDHFMRSYVGVLTKFAEDLEEPFNKFIQFTDNTSKALEEICGHYVDTTP-- 253
Query: 290 GTGATMSDDDEDQVDSDANLFD-GSLEGPDTMGFGP---LIPTESERSLM---ERVRQEL 342
DED D + G+ EG D G + P + + S++ +++
Sbjct: 254 ---------DEDNCGFDIGPLEYGAQEGDDLDTLGDENVMYPLDIDESVIVDPMASDEDI 304
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K L++ Y I +++ E R R+ GKLP ++LK W+ HS WPYP+
Sbjct: 305 KKALRKKYGRHIGELKAEFNRVRKKGKLPTSARTILKDWFNRHSHWPYPS 354
>gi|27413549|gb|AAO11694.1| Knotted-1-like homeobox protein H1 [Nicotiana tabacum]
Length = 343
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 114/227 (50%), Gaps = 29/227 (12%)
Query: 169 VNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA 228
N + K++I++HP Y +LLSA+V C +I P + + R++ A S + + S
Sbjct: 80 ANCSSTSIKSKIMAHPHYPRLLSAYVNCQKIGAPPEVVARLEEVCATSA-TIGRNSG--- 135
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
G++ +D LDQFM Y +L ++++L + + EA++ IE ++LT S
Sbjct: 136 --GIIGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLTSSS 189
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTM-GFGPLIPTESERSLMERVRQELKHELK 347
E A + +D + N GS E D GF I ++E QELK +L
Sbjct: 190 ESVAAL-----GEAIDRNGN---GSSEEVDVNNGF---IDLQAED-------QELKGQLL 231
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 232 RKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 278
>gi|4589449|dbj|BAA76750.1| KN1-type homeobox protein [Nicotiana tabacum]
Length = 327
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 114/253 (45%), Gaps = 35/253 (13%)
Query: 147 MNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQL 206
+NN+S +N E +E + KA+I +HPLY LLSA++ C ++ P ++
Sbjct: 37 INNSSVDNNLEKASLE---------MSDLIKAQIANHPLYPNLLSAYLQCRKVGAP-QEM 86
Query: 207 PRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAM 266
I ++++ H++S G D ELD FM Y +L +KE+L +
Sbjct: 87 ASILEEISKENHLISSGHNTEIGT-----DPELDDFMESYCAVLLKYKEELSKPFD---- 137
Query: 267 EAVMACWEIEQSLQSLTGVSPGEGTGATMSDD-------DEDQVDSDANLFDGSLEGPDT 319
EA IE L SL + T T S + DE SD +L G +E D+
Sbjct: 138 EATTFLNNIESQLSSLCKENLTTTTTTTTSFNSNNNYLSDEAGGTSDEDLCCGEMEAADS 197
Query: 320 MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK 379
P ELK L + Y + +R+E L+KR+ GKLP D + L
Sbjct: 198 TQESPA---------NREGDNELKETLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTALL 248
Query: 380 SWWQSHSKWPYPT 392
WW +H +WPYPT
Sbjct: 249 EWWNTHYRWPYPT 261
>gi|147800378|emb|CAN64264.1| hypothetical protein VITISV_033719 [Vitis vinifera]
Length = 359
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 43/256 (16%)
Query: 147 MNNASTNNKSEGVVVESGADGVV----NWQNARYKAEILSHPLYEQLLSAHVACLRIATP 202
M S N+ + G G++ + + KA+I++HP Y +LL+A+V C ++ P
Sbjct: 74 MPQGSCNHNNSGCYFMEGSNSNTTNNHDCTSCSMKAKIMAHPHYPRLLAAYVNCQKVGAP 133
Query: 203 VDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHV 261
+ + R++ A + A+G + V +D LDQFM Y +L ++++L +
Sbjct: 134 PEVVARLEEACASEE-------AMGRSATSCVGEDPALDQFMEAYCEMLTKYEQELTKPF 186
Query: 262 RVHAMEAVMACWEIEQSLQSLTGVSPGE---GTGATMSDDDEDQVDSDANLFDGSLEGPD 318
+ EA++ IE ++LT V+P + G+ A E++VD + D
Sbjct: 187 K----EAMLFLSRIECQFKALT-VAPSDSVCGSYAGRVGSSEEEVDGNDTCID------- 234
Query: 319 TMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVL 378
P +R ELK +L + Y + +++E L+K++ GKLP + L
Sbjct: 235 --------PQAEDR--------ELKGQLLRKYSGYLGSLKQEFLKKKKKGKLPKEARQQL 278
Query: 379 KSWWQSHSKWPYPTVS 394
WW H KWPYP+ S
Sbjct: 279 LDWWSRHYKWPYPSES 294
>gi|359485634|ref|XP_002273805.2| PREDICTED: homeobox protein SBH1-like, partial [Vitis vinifera]
Length = 358
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/256 (26%), Positives = 120/256 (46%), Gaps = 43/256 (16%)
Query: 147 MNNASTNNKSEGVVVESGADGVV----NWQNARYKAEILSHPLYEQLLSAHVACLRIATP 202
M S N+ + G G++ + + KA+I++HP Y +LL+A+V C ++ P
Sbjct: 73 MPQGSCNHNNSGCYFMEGSNSNTTNNHDCTSCSMKAKIMAHPHYPRLLAAYVNCQKVGAP 132
Query: 203 VDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHV 261
+ + R++ A + A+G + V +D LDQFM Y +L ++++L +
Sbjct: 133 PEVVARLEEACASEE-------AMGRSATSCVGEDPALDQFMEAYCEMLTKYEQELTKPF 185
Query: 262 RVHAMEAVMACWEIEQSLQSLTGVSPGE---GTGATMSDDDEDQVDSDANLFDGSLEGPD 318
+ EA++ IE ++LT V+P + G+ A E++VD + D
Sbjct: 186 K----EAMLFLSRIECQFKALT-VAPSDSVCGSYAGRVGSSEEEVDGNDTCID------- 233
Query: 319 TMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVL 378
P +R ELK +L + Y + +++E L+K++ GKLP + L
Sbjct: 234 --------PQAEDR--------ELKGQLLRKYSGYLGSLKQEFLKKKKKGKLPKEARQQL 277
Query: 379 KSWWQSHSKWPYPTVS 394
WW H KWPYP+ S
Sbjct: 278 LDWWSRHYKWPYPSES 293
>gi|55669501|gb|AAV54618.1| homeobox transcription factor KN1 [Pinus taeda]
Length = 434
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 106/216 (49%), Gaps = 22/216 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++IL+HP Y LL A++ C +I P + + R+DA + Q + ++G D
Sbjct: 175 KSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREHQDPQRRTVSIGM-------D 227
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L + E+L + + EA++ +IE SL G+GT S
Sbjct: 228 PELDQFMEAYCEILTKYHEELAKPFK----EAMLFLKKIETQFNSL-----GKGTIRISS 278
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D+D+ GS E + G E + +E +ELK+ L + Y +
Sbjct: 279 PADDDEKTEGG----GSSEEVEDGSGGETDFQEVDHHAVED--RELKNHLLRKYCGYLSS 332
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 333 LKQEFMKKKKKGKLPKDARQKLLDWWSLHDKWPYPS 368
>gi|168051647|ref|XP_001778265.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
gi|162670362|gb|EDQ56932.1| KNOX class 1 protein MKN5 [Physcomitrella patens subsp. patens]
Length = 428
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 104/240 (43%), Gaps = 27/240 (11%)
Query: 162 ESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATP---VDQLPRIDAQLAQSQH 218
E DG+ + Q +A I+ HP Y +++ AHV +I P +++L + + Q Q+
Sbjct: 151 EEVPDGLESEQVPELRAAIIDHPFYPEMVLAHVRVFKIGAPRRLINKLDDLTRKFQQYQN 210
Query: 219 VVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQS 278
L G D LD FM YV +L F E L++ + +
Sbjct: 211 C----DTLKIGT-----DPALDHFMRSYVDMLTKFAEDLEEPFNKFMQFK-------DST 254
Query: 279 LQSLTGVSPGEGTGATMSDDDEDQVDSDANLF------DGSLEGPDTMGFGPLIPTESER 332
++L G+ G T +DD + D + D L + + + PL ES
Sbjct: 255 TKALEGIC-GHYVETTPDEDDNNGFDIGPMEYGAQASDDLYLPADENLMY-PLDIDESVV 312
Query: 333 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+E+K L++ Y I +++ E R R+ GKLP S+LK W+ HS WPYP+
Sbjct: 313 VDPMASDEEIKKALRKKYGRHIGELKAEFNRVRKKGKLPSSARSILKDWFNRHSYWPYPS 372
>gi|413950087|gb|AFW82736.1| liguleless4 [Zea mays]
Length = 277
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 104/218 (47%), Gaps = 26/218 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + + + A + G V D
Sbjct: 54 KAQIAGHPRYPSLLSAYIECRKVGAP----PEVATLL---EEIGRERCAAASAGGEVGLD 106
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA + L SL G + A++S
Sbjct: 107 PELDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCGAA------ASLS 156
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D+ V S D + G DT P S R L +R ELK L + Y +
Sbjct: 157 DE---MVGSSEE--DEACSGGDTEATEPGQQEHSSR-LADR---ELKEMLLKKYSGCLSR 207
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+R E L+KR+ GKLP D S L WW +H +WPYPTV+
Sbjct: 208 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPTVT 245
>gi|6942300|gb|AAF32399.1|AF224499_1 KNOTTED-1-like homeobox protein b [Triticum aestivum]
gi|6942302|gb|AAF32400.1|AF224500_1 KNOTTED-1-like homeobox protein d [Triticum aestivum]
gi|57157675|dbj|BAD83802.1| KN1 homeobox protein [Triticum aestivum]
gi|57157677|dbj|BAD83803.1| KN1 homeobox protein [Triticum aestivum]
Length = 363
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + L R+ A +AQ + + +ALG+ G T+
Sbjct: 108 KAKIISHPHYSSLLAAYLDCQKVGAPPEVLARLTA-VAQDLELRQR-TALGS-LGTATE- 163
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ +
Sbjct: 164 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLSISGRSLRNILSSG 219
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 220 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 260
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S
Sbjct: 261 LKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPYPSES 298
>gi|371767724|gb|AEX56217.1| knotted-like 2 protein [Dactylorhiza fuchsii]
Length = 327
Score = 82.0 bits (201), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 101/249 (40%), Gaps = 36/249 (14%)
Query: 159 VVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ-SQ 217
V +G GV + KA+I HP Y LLSA++ C ++ P P + L + +
Sbjct: 36 VAPAAGCGGVATDCSDLIKAKIARHPRYPSLLSAYIDCRKVGAP----PEVALLLEEIAT 91
Query: 218 HVVSKYSALGAGQGL-VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIE 276
++ Y G + D ELD+ M Y +L +K++L + EA IE
Sbjct: 92 ERIADYGVNECGSAAEIPADPELDKLMDSYCRVLAWYKDELSKPFE----EAASFLSSIE 147
Query: 277 QSLQSLTG-------------VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFG 323
+SL SPG T S + D D + D
Sbjct: 148 TQFRSLCKPSAVSAISSSSAASSPGAVTSPLPSHEALGSSDEDPSYGDDD---------- 197
Query: 324 PLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQ 383
P+E S ELK L++ Y + +++E L+ + GK+P D S L WW
Sbjct: 198 ---PSEIYDSSSRVPENELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWN 254
Query: 384 SHSKWPYPT 392
SH +WPYPT
Sbjct: 255 SHYQWPYPT 263
>gi|160420030|dbj|BAF93478.1| class-I knotted1-like homeobox protein IBKN1 [Ipomoea batatas]
Length = 322
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 38/222 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTD 235
KA+I++HP Y +LL+A++ C +I P P + A+L + + +A+G AG + +
Sbjct: 70 KAKIMAHPHYHRLLAAYLNCQKIGAP----PEVVARL---EEACASMAAMGRAGGTCLGE 122
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D LDQFM Y +L ++++L + + EA++ IE ++LT E GA
Sbjct: 123 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIESQFKALTIPCSSESAGADA 178
Query: 296 SDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
D + E++VD D +E +ELK +L + Y
Sbjct: 179 MDRNVSSEEEVDVTTGFIDPQVED-----------------------RELKGQLLRKYSG 215
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 216 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 257
>gi|18389212|gb|AAL67665.1| invaginata [Antirrhinum majus]
Length = 351
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 37/225 (16%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ-G 231
N KA+I++HP Y +LL+A++ C +I P P + +L ++ + + +G
Sbjct: 95 NDSVKAKIMAHPYYHKLLAAYINCQKIGAP----PEVAVKLEEA---CASAATMGRNSVS 147
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
+ +D LDQFM Y +L ++++L + R EA++ IE ++LT S
Sbjct: 148 RIGEDPALDQFMEAYCEMLSKYEQELSKPFR----EAMLFLSRIECQFKALTLSSSDSAC 203
Query: 292 GATMS--DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
G M E+++D D +L D P +R ELK +L +
Sbjct: 204 GEAMDRHGSSEEEIDVDNSLID---------------PQAEDR--------ELKGQLLRK 240
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 241 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 285
>gi|6942297|gb|AAF32398.1|AF224498_1 KNOTTED-1-like homeobox protein a [Triticum aestivum]
gi|57157673|dbj|BAD83801.1| KN1 homeobox protein [Triticum aestivum]
Length = 362
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/218 (33%), Positives = 111/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + L R+ A +AQ + + +ALG+ G T+
Sbjct: 107 KAKIISHPHYSSLLAAYLDCQKVGAPPEVLARLTA-VAQDLELRQR-TALGS-FGTATE- 162
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ +
Sbjct: 163 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLSISGRSLRNILSSG 218
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 219 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 259
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S
Sbjct: 260 LKQELSKKKKKGKLPKDARQQLLSWWEMHYKWPYPSES 297
>gi|300676311|gb|ADK26525.1| HERMIT/STM protein [Petunia x hybrida]
Length = 347
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG-LVTD 235
KA+I++HP Y +LL+A++ C +I P + + R++ A S H+ G G ++ +
Sbjct: 86 KAKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEELCATSAHMGRNGGGGGGGGNNVIGE 145
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D LDQFM Y +L ++++L + + EA++ IE ++LT S E A
Sbjct: 146 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLASTSESVAAFG 201
Query: 296 SDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
D E++VD + +L D P +R ELK +L + Y
Sbjct: 202 EAMDRNGSSEEEVDVNNSLVD---------------PQAEDR--------ELKGQLLRKY 238
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 239 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 282
>gi|22074785|gb|AAM47027.1| shootmeristemless-like [Petunia x hybrida]
Length = 347
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 109/224 (48%), Gaps = 33/224 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG-LVTD 235
KA+I++HP Y +LL+A++ C +I P + + R++ A S H+ G G ++ +
Sbjct: 86 KAKIMAHPHYPRLLAAYINCQKIGAPPEVVARLEEVCATSAHMGRNGGGGGGGGNNVIGE 145
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D LDQFM Y +L ++++L + + EA++ IE ++LT S E A
Sbjct: 146 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLASTSESVAAFG 201
Query: 296 SDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
D E++VD + +L D P +R ELK +L + Y
Sbjct: 202 EAMDRNGSSEEEVDVNNSLVD---------------PQAEDR--------ELKGQLLRKY 238
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 239 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 282
>gi|58011285|gb|AAW62517.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 460
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 107/219 (48%), Gaps = 27/219 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA-LGAGQGLVTD 235
+A I+SHP Y +L+ AH+ C ++A + + +ID + + +A LGA
Sbjct: 217 RAAIVSHPHYPELVVAHMNCHKVAASPEVVSQIDEIIQNFKDFQPPVAASLGA------- 269
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
+ ELDQFM Y +L + ++ VR EAV C +++Q Q +T S T
Sbjct: 270 NPELDQFMVAYYSMLL----KCEKEVRKTFKEAVAFCKKLDQQFQVITNGSASSVTSVE- 324
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
SDD + DS + G+ E E M + + ELK +L + Y I
Sbjct: 325 SDDRNEAYDSSEDEDSGA-------------EVEIEVDPMAKDK-ELKEQLMRKYSGYIS 370
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
++ E L+K++ GKLP D+ +L +WW H KWPYP+ S
Sbjct: 371 SLKHEFLKKKKKGKLPKDSRQILLNWWSVHYKWPYPSES 409
>gi|357131920|ref|XP_003567581.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
distachyon]
Length = 290
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 99/216 (45%), Gaps = 26/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P P + + L + AG G + D
Sbjct: 39 KAQIASHPRYPTLLSAYIECRKVGAP----PEVASLLEEIGRERR------AGAGAIGVD 88
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA I+ L +L S G AT +
Sbjct: 89 PELDEFMESYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNL--CSGGSSPAATAT 142
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DE SD G +G D I E + + ELK L + Y +
Sbjct: 143 HSDEMVGSSDDEQCSGETDGLD-------IGQEHSSRIAD---HELKEMLLKKYSGCLSR 192
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D + L WW +H +WPYPT
Sbjct: 193 LRSEFLKKRKKGKLPKDARTALMDWWNTHYRWPYPT 228
>gi|242033113|ref|XP_002463951.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
gi|241917805|gb|EER90949.1| hypothetical protein SORBIDRAFT_01g009460 [Sorghum bicolor]
Length = 372
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 108/228 (47%), Gaps = 38/228 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT-D 235
KA+I+SHP Y +LL+A + C ++ P P ++A + + G T
Sbjct: 86 KAKIVSHPRYHRLLAAFLDCHKVGCP----PEAAEEIAAAAREREAWQRAAVGDAHNTRP 141
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG----- 290
D ELDQFM Y LL ++KE+L + +R EA +E L S+T P G
Sbjct: 142 DPELDQFMESYSELLVAWKEELTRPLR----EAKEFLTTVELQLNSITNTGPPMGALISS 197
Query: 291 ------TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
TG MSDDD+++ G +E +G P +ELK
Sbjct: 198 AAAEDNTGLDMSDDDQEEGS-------GGMEAEAALGIDPCSDD-----------KELKK 239
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+L + Y + ++R+E+ +KR+ GKLP + L SWW+ H +WPYP+
Sbjct: 240 QLLRKYSGCLGNLRKELCKKRKKGKLPKEARQKLLSWWELHYRWPYPS 287
>gi|351734506|ref|NP_001237352.1| KNT1 [Glycine max]
gi|114150002|gb|ABI51619.1| KNT1 [Glycine max]
Length = 362
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 104/221 (47%), Gaps = 36/221 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P + + R++ A + + + G + +D
Sbjct: 110 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVGRLEEACASAAVI------MAGGTASIGED 163
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + + EA++ IE +SLT S + T +
Sbjct: 164 PALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLQRIECQFKSLTISSSLDTTACNEA 219
Query: 297 DD---DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
D + VD N+ D E QELK +L + Y+
Sbjct: 220 IDRNGPSEDVDVQTNIIDPQAED-----------------------QELKGQLLRKYRGY 256
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E +KR+ GKLP + L WW H KWPYP+ S
Sbjct: 257 LGSLKQEFTKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 297
>gi|242033115|ref|XP_002463952.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
gi|241917806|gb|EER90950.1| hypothetical protein SORBIDRAFT_01g009480 [Sorghum bicolor]
Length = 360
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 122/255 (47%), Gaps = 32/255 (12%)
Query: 139 LKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLR 198
L+ AN ++ +A N K++G E + KA+I+SHP Y LL+A++ C +
Sbjct: 72 LQLANGGSLLDACVNVKAKG---EPSSSSPYAGDLEAIKAKIISHPHYYSLLAAYLECKK 128
Query: 199 IATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQL 257
+ P P + A+L A +Q + ++ +G G T+ ELDQFM Y +L FKE+L
Sbjct: 129 VGAP----PDVSARLTAMAQELEARQRTALSGLGAATE-PELDQFMEAYHEMLVKFKEEL 183
Query: 258 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGP 317
+ ++ EA+ +E L SL+ + +EDQ S G E P
Sbjct: 184 TRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSGSSEEDQEGSG-----GETELP 234
Query: 318 DTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSV 377
+ G V QELKH L + Y + +++E+ +K++ GKLP +
Sbjct: 235 EVDVHG--------------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKEARQQ 280
Query: 378 LKSWWQSHSKWPYPT 392
L SWW H KWPYP+
Sbjct: 281 LLSWWDLHYKWPYPS 295
>gi|33333544|gb|AAQ11888.1| knotted 1 [Nicotiana tabacum]
Length = 327
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 114/253 (45%), Gaps = 35/253 (13%)
Query: 147 MNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQL 206
+NN+S +N E +E + KA+I +HPLY LLSA++ C ++ TP ++
Sbjct: 37 INNSSVDNNLEKASLE---------MSDLIKAQIANHPLYPNLLSAYLQCRKVGTP-QEM 86
Query: 207 PRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAM 266
I ++++ H++S G D ELD FM Y +L +KE+L +
Sbjct: 87 ASILEEISKENHLISSCHNTEIGT-----DPELDDFMESYCAVLLKYKEELSKPFD---- 137
Query: 267 EAVMACWEIEQSLQSLTGVSPGEGTGATMSDD-------DEDQVDSDANLFDGSLEGPDT 319
EA IE L SL + T T S + DE SD +L +E D+
Sbjct: 138 EATTFLNNIESQLSSLCKENLTTTTTTTTSFNSNNNYLSDEAGGTSDEDLGCREMEAVDS 197
Query: 320 MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK 379
P ELK L + Y + +R+E L+KR+ GKLP D + L
Sbjct: 198 TQESPA---------NREGDNELKETLMRKYSGYLSSLRKEFLKKRKKGKLPKDARTALL 248
Query: 380 SWWQSHSKWPYPT 392
WW +H +WPYPT
Sbjct: 249 DWWNTHYRWPYPT 261
>gi|449453537|ref|XP_004144513.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 350
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 35/218 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HPL+ +LL+A+V C ++ P P + A+L Q+ V + S AG G +D
Sbjct: 99 KAKIMAHPLFPRLLTAYVNCQKVGAP----PEVVARLEQACAVATG-SCRAAGHG---ND 150
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + + EA++ IE L++ S G
Sbjct: 151 PALDQFMEAYCEMLTKYEQELTKPFK----EAMLFFSRIESQLKAEAVSSDGFELVGQNE 206
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
E +VD + N D E +ELK +L + Y +
Sbjct: 207 CSKEIEVDMNENYIDPQAE-----------------------VKELKGQLLRKYSGYLGS 243
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E L+K++ GKLP + L WW H KWPYP+ S
Sbjct: 244 LKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSES 281
>gi|28195122|gb|AAO33774.1| knotted protein TKN4 [Solanum lycopersicum]
Length = 335
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATP------VDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
KA+I +HPLY LLSA++ C ++ P +D++ + + ++ S+H S +GA
Sbjct: 77 KAQIANHPLYPNLLSAYLQCRKVGAPQEMTSILDEISKENNLISSSRHS----SEIGA-- 130
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELD+FM Y +L +KE+ + EA IE L SL +
Sbjct: 131 -----DPELDEFMESYCAVLVKYKEEFSKPFD----EATSFLSNIESQLSSLCKDNLITS 181
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
T DE SD +L +E D+ P E ELK L + Y
Sbjct: 182 TSFNNYISDEAGGSSDEDLGCEEMEAADSQE----SPANCEGD------NELKEMLMRKY 231
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E L+KR+ GKLP + VL WW++H +WPYPT
Sbjct: 232 SGYLSSLRKEFLKKRKKGKLPKEARIVLLDWWKNHYRWPYPT 273
>gi|357134921|ref|XP_003569063.1| PREDICTED: homeobox protein knotted-1-like 1-like [Brachypodium
distachyon]
Length = 300
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 101/220 (45%), Gaps = 31/220 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I +HP Y LLSA++ C ++ P D ++ S+ Y A GAG+ + D
Sbjct: 43 KAQIAAHPRYPSLLSAYIECRKVGAPPDVAVLLEEM---SRERRPGYEAAGAGE--IGLD 97
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + + EA + L +L G G AT
Sbjct: 98 PELDEFMEAYCRVLWRYKEELSRPLD----EAASFLATVRTQLSNLCG----GGARATFH 149
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ----GYKE 352
D+ F GS E G G SE + E + HELK+ Y
Sbjct: 150 SDE----------FVGSSEDEPCSGDG----DASEAGMQEHTSRLADHELKEMLLKKYSG 195
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 196 CLSRLRSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPT 235
>gi|449434394|ref|XP_004134981.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
gi|449518023|ref|XP_004166043.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 340
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 107/222 (48%), Gaps = 35/222 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ S+ G G + +D
Sbjct: 85 KAKIMAHPHYHRLLAAYVNCRKVGAP----PEVVARLEEACASAVTMSSGNNGGGCIGED 140
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS----PGEGTG 292
LDQFM Y +L ++++L + R +A++ I+ ++L+ S P G
Sbjct: 141 PALDQFMEAYCEMLTKYEQELSKPFR----DAMLFLQRIDSQFKALSISSSHLPPACGEA 196
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
+ E++VD + + D P +R ELK +L + Y
Sbjct: 197 FDRNGSSEEEVDINGHSID---------------PQAEDR--------ELKGQLLRKYSG 233
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 234 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 275
>gi|449508861|ref|XP_004163429.1| PREDICTED: homeobox protein SBH1-like [Cucumis sativus]
Length = 346
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 104/218 (47%), Gaps = 35/218 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HPL+ +LL+A+V C ++ P P + A+L Q+ V + S AG G +D
Sbjct: 99 KAKIMAHPLFPRLLTAYVNCQKVGAP----PEVVARLEQACAVATG-SCRAAGHG---ND 150
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + + EA++ IE L++ S G
Sbjct: 151 PALDQFMEAYCEMLTKYEQELTKPFK----EAMLFFSRIESQLKAEAVSSDGFELVGQNE 206
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
E +VD + N D E +ELK +L + Y +
Sbjct: 207 CSKEIEVDMNENYIDPQAE-----------------------VKELKGQLLRKYSGYLGS 243
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E L+K++ GKLP + L WW H KWPYP+ S
Sbjct: 244 LKQEFLKKKKNGKLPKEARQQLLDWWSRHYKWPYPSES 281
>gi|31323451|gb|AAP47027.1|AF375968_1 knotted homeodomain protein 4, partial [Solanum lycopersicum]
Length = 338
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 104/222 (46%), Gaps = 31/222 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATP------VDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
KA+I +HPLY LLSA++ C ++ P +D++ + + ++ S+H S +GA
Sbjct: 80 KAQIANHPLYPNLLSAYLQCRKVGAPQEMTSILDEISKENNLISSSRHS----SEIGA-- 133
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELD+FM Y +L +KE+ + EA IE L SL +
Sbjct: 134 -----DPELDEFMESYCAVLVKYKEEFSKPFD----EATSFLSNIESQLSSLCKDNLITS 184
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
T DE SD +L +E D+ P E ELK L + Y
Sbjct: 185 TSFNNYISDEAGGSSDEDLGCEEMEAADSQE----SPANCEGD------NELKEMLMRKY 234
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E L+KR+ GKLP + VL WW++H +WPYPT
Sbjct: 235 SGYLSSLRKEFLKKRKKGKLPKEARIVLLDWWKNHYRWPYPT 276
>gi|188531742|gb|ACD62901.1| STM-like protein [Ipomoea nil]
Length = 326
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 38/222 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTD 235
KA+I++HP Y +LL+A++ C +I P P + A+L + + +A+G G + +
Sbjct: 74 KAKIMAHPHYHRLLAAYLNCQKIGAP----PEVVARL---EEACASMAAMGRTGGSCLGE 126
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D LDQFM Y +L ++++L + + EA++ IE ++LT E GA
Sbjct: 127 DPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIESQFKALTLPCSSESAGADA 182
Query: 296 SDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
D + E++VD D +E +ELK +L + Y
Sbjct: 183 MDRNVSSEEEVDVTTGFIDPQVE-----------------------DRELKGQLLRKYSG 219
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 220 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 261
>gi|162463933|ref|NP_001105084.1| liguleless4 [Zea mays]
gi|30348863|gb|AAP31409.1|AF457118_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
gi|195607142|gb|ACG25401.1| homeotic protein knotted-1 [Zea mays]
gi|238009140|gb|ACR35605.1| unknown [Zea mays]
gi|408690288|gb|AFU81604.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|413950086|gb|AFW82735.1| liguleless4 [Zea mays]
Length = 307
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 101/218 (46%), Gaps = 30/218 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + + + A + G V D
Sbjct: 54 KAQIAGHPRYPSLLSAYIECRKVGAP----PEVATLL---EEIGRERCAAASAGGEVGLD 106
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA + L SL G + A++S
Sbjct: 107 PELDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCGAA------ASLS 156
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERS--LMERVRQELKHELKQGYKEKI 354
D+ + D G E + P + E S L +R ELK L + Y +
Sbjct: 157 DEMVGSSEEDEACSGGDTEATE--------PGQQEHSSRLADR---ELKEMLLKKYSGCL 205
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 206 SRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 243
>gi|85816364|gb|ABC84491.1| knotted-like transcription factor [Prunus persica]
gi|88853988|gb|ABD52723.1| KNOPE1 [Prunus persica]
Length = 389
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 112/231 (48%), Gaps = 35/231 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C R+ P + + R+ A A+ + + S++ + + + D
Sbjct: 126 KAKIIAHPQYSNLLEAYMDCQRVGAPSEVVARLTA--ARQEFEARQRSSVASRE--ASKD 181
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG--------VSPG 288
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 182 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNAPPLRIFSPS 237
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
E + +E+Q +S G E P+ + P +R ELK+ L +
Sbjct: 238 EDKCEGLGSSEEEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLLK 278
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
Y + +++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 279 KYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 329
>gi|195637536|gb|ACG38236.1| homeobox protein OSH1 [Zea mays]
Length = 255
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P + + L + VS+ AG G + D
Sbjct: 2 KAQIASHPRYPSLLSAYIECRKVGAH----PHVTSLLEE----VSRERRPDAGAGEIGVD 53
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA I+ L L AT S
Sbjct: 54 PELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDLCSGGSSPAATATHS 109
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
DD +++Q D ++ D E +G ELK L + Y
Sbjct: 110 DDMMGSSEDEQCSGDTDVPDMGQEHSSHLG-----------------DHELKEMLLKKYS 152
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D +VL WW +H +WPYPT
Sbjct: 153 GCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 193
>gi|85543300|gb|ABC71530.1| KNOTTED1 homeodomain protein [Lithachne humilis]
Length = 350
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/216 (31%), Positives = 106/216 (49%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A LAQ + + S G G +
Sbjct: 102 KAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTA-LAQDLELRQRTSLSGLG---AATE 157
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ AME + +E L SL+ +
Sbjct: 158 PELDQFMEAYHEMLMKYREELTRPLQ-EAMEFLR---RVESQLNSLSISGRPLRNILSSG 213
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH+L + Y +
Sbjct: 214 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHQLLRKYSGYLSS 254
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP D L +WW H KWPYP+
Sbjct: 255 LKQELSKKKKKGKLPKDARQQLLNWWDMHYKWPYPS 290
>gi|3024086|sp|Q43484.1|KNOX3_HORVU RecName: Full=Homeobox protein KNOX3; AltName: Full=Hooded protein
gi|793847|emb|CAA58503.1| Knox3 [Hordeum vulgare]
Length = 364
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/218 (32%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G G T+
Sbjct: 109 KAKIISHPHYSSLLAAYLDCQKVGAPPEVSARLTA-VAQDLELRQR-TALG-GLGTATE- 164
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ +
Sbjct: 165 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLSISGRSLRNILSTG 220
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 221 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 261
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP + L SWW+ H KWPYP+ S
Sbjct: 262 LKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSES 299
>gi|162459056|ref|NP_001105508.1| liguleless3 [Zea mays]
gi|4240539|gb|AAD13611.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
gi|323388555|gb|ADX60082.1| Homeobox HB transcription factor CDS [Zea mays]
gi|414877207|tpg|DAA54338.1| TPA: liguleless3 [Zea mays]
Length = 295
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/221 (31%), Positives = 100/221 (45%), Gaps = 34/221 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P + + L + VS+ AG G + D
Sbjct: 42 KAQIASHPRYPSLLSAYIECRKVGAH----PHVTSLLEE----VSRERRPDAGAGEIGVD 93
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA I+ L L AT S
Sbjct: 94 PELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDLCSGGSSPAATATHS 149
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
DD +++Q D ++ D E +G ELK L + Y
Sbjct: 150 DDMMGSSEDEQCSGDTDVPDMGQEHSSHLG-----------------DHELKEMLLKKYS 192
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D +VL WW +H +WPYPT
Sbjct: 193 GCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 233
>gi|414872575|tpg|DAA51132.1| TPA: knotted1 [Zea mays]
Length = 343
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P P + A+L + V G +
Sbjct: 89 KAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTALGGLAAATE 144
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 145 PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSG 200
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 201 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSS 241
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L SWW H KWPYP+
Sbjct: 242 LKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 277
>gi|300174952|dbj|BAJ10711.1| shoot meristemless ortholog [Polypleurum stylosum]
Length = 352
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 115/252 (45%), Gaps = 42/252 (16%)
Query: 149 NASTNNKSEGVV-VESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLP 207
NA+ N+ G V++ +N KA+I+SHP Y +LLSA+V C +I P + +
Sbjct: 72 NATANSTGAGCFFVDNDVHEGIN-TTCSIKAKIMSHPHYNRLLSAYVNCQKIGAPPEVV- 129
Query: 208 RIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAME 267
+ + +ALG G + D LDQFM Y +L ++++L + ++ E
Sbjct: 130 -----ARLEEARAAAAAALGPSDGCLGQDPALDQFMEAYCEMLTKYEQELSKPLK----E 180
Query: 268 AVMACWEIEQSLQSLTGVSP-----GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGF 322
A++ +E ++LT SP GEG S D+E D + D E
Sbjct: 181 AMVFLQRVEYQFKALTVSSPNSGYSGEGNERNASSDEEG--DGNNVFIDPQAE------- 231
Query: 323 GPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWW 382
QELK +L + Y + +++E ++KR+ GKLP + L WW
Sbjct: 232 ----------------DQELKGQLLRRYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWW 275
Query: 383 QSHSKWPYPTVS 394
H KWPYP+ S
Sbjct: 276 NRHYKWPYPSES 287
>gi|6016217|sp|O04135.1|KNAP2_MALDO RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=KNAP2
gi|1946220|emb|CAA96511.1| kn1-like protein [Malus x domestica]
Length = 397
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C R+ P D + R+ Q ++ + G + + D
Sbjct: 133 KAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVA---RQEFEARQRSSGTSRE-TSKD 188
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---------VSP 287
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 189 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNNAPPLRIFSP 244
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
E + +E+Q +S G E P+ + P +R ELK+ L
Sbjct: 245 SEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLL 285
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ Y + +++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 286 RKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 337
>gi|60100884|gb|AAK61308.2|AF285147_1 class 1 KNOTTED1-like protein MKN2 [Physcomitrella patens]
Length = 384
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 98/230 (42%), Gaps = 27/230 (11%)
Query: 172 QNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRID--AQLAQSQHVVSKYSALGAG 229
Q+ +A I+ HP Y +++ AHV +I P ++D A+ Q S +G+
Sbjct: 87 QDLELRAAIIDHPFYPEMVLAHVRVFKIGAPGRLRRKLDELAKKFQRFQXXDHTSKIGS- 145
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
D ELD F YV +L F E L++ +E+ +P
Sbjct: 146 ------DPELDHFXRSYVGVLTKFAEDLEEPFNKFIQFTDNTSKALEEICGHYVDTTP-- 197
Query: 290 GTGATMSDDDEDQVDSDANLFD-GSLEGPDTMGFGP---LIPTESERSLM---ERVRQEL 342
DED D + G+ EG D G + P + + S++ +++
Sbjct: 198 ---------DEDNCGFDIGPLEYGAQEGDDLDTLGDENVMYPLDIDESVIVDPMASDEDI 248
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
K L++ Y I +++ E R R+ GKLP ++LK W+ HS WPYP+
Sbjct: 249 KKALRKKYGRHIGELKAEFNRVRKKGKLPTSARTILKDWFNRHSHWPYPS 298
>gi|302398857|gb|ADL36723.1| HD domain class transcription factor [Malus x domestica]
Length = 397
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C R+ P D + R+ Q ++ + G + + D
Sbjct: 133 KAKIIAHPQYSNLLEAYMDCQRVGAPSDVVARLSVA---RQEFEARQRSSGTSRE-TSKD 188
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---------VSP 287
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 189 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNNAPPLRIFSP 244
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
E + +E+Q +S G E P+ + P +R ELK+ L
Sbjct: 245 SEDKCEGIGSSEEEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLL 285
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ Y + +++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 286 RKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 337
>gi|86611375|gb|ABD14371.1| homeodomain protein Kn1 [Prunus dulcis]
Length = 384
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL++++ C ++ P + + R++ A S + + + +G G + +D
Sbjct: 125 KAKIMAHPHYHRLLASYINCQKVGAPPEVVARLEEACA-SAASIGQMMSSSSGSGCLGED 183
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE----GTG 292
LDQFM Y +L ++++L + + EA++ IE ++LT S + G G
Sbjct: 184 PALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSDSAVCGDG 239
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
+ E++VD + N D P +R ELK +L + Y
Sbjct: 240 LDRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSG 276
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 277 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 318
>gi|194690304|gb|ACF79236.1| unknown [Zea mays]
Length = 359
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P P + A+L + V G +
Sbjct: 105 KAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTALGGLAAATE 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 161 PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L SWW H KWPYP+
Sbjct: 258 LKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>gi|289655988|gb|ADD14042.1| class 1 KNOTTED-like transcription factor STM-like2 [Prunus
persica]
Length = 383
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 32/222 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL++++ C ++ P + + R++ A S + + + +G G + +D
Sbjct: 124 KAKIMAHPHYHRLLASYINCQKVGAPPEVVARLEEACA-SAASIGQMMSSSSGSGCLGED 182
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE----GTG 292
LDQFM Y +L ++++L + + EA++ IE ++LT S + G G
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPFK----EAMIFLQRIESQFKALTLSSSSDSAVCGDG 238
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
+ E++VD + N D P +R ELK +L + Y
Sbjct: 239 LDRNGSSEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSG 275
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 276 YLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 317
>gi|162458085|ref|NP_001105436.1| homeotic protein knotted-1 [Zea mays]
gi|123183|sp|P24345.1|KN1_MAIZE RecName: Full=Homeotic protein knotted-1
gi|22351|emb|CAA43605.1| Kn1 [Zea mays]
gi|30267712|gb|AAP21616.1| KNOTTED1 [Zea mays]
gi|32351475|gb|AAP76321.1| homeobox transcription factor KNOTTED1 [Zea mays]
gi|195624480|gb|ACG34070.1| homeobox protein OSH1 [Zea mays]
gi|414872576|tpg|DAA51133.1| TPA: knotted1 [Zea mays]
gi|227607|prf||1707304A Knotted-1 gene
Length = 359
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P P + A+L + V G +
Sbjct: 105 KAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTALGGLAAATE 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 161 PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L SWW H KWPYP+
Sbjct: 258 LKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>gi|195642508|gb|ACG40722.1| homeobox protein OSH1 [Zea mays]
Length = 359
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P P + A+L + V G +
Sbjct: 105 KAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTALGGLAAATE 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 161 PELDQFMEAYHEILVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L SWW H KWPYP+
Sbjct: 258 LKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 293
>gi|164454389|dbj|BAF96741.1| knotted-like homeobox transcription factor MKN5 [Physcomitrella
patens]
Length = 404
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 27/235 (11%)
Query: 167 GVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATP---VDQLPRIDAQLAQSQHVVSKY 223
G+ + Q +A I+ HP Y +++ AHV +I P +++L + + Q Q+
Sbjct: 132 GLESEQVPELRAAIIDHPFYPEMVLAHVRVFKIGAPRRLINKLDDLTRKFQQYQNC---- 187
Query: 224 SALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
L G D LD FM YV +L F E L++ + + ++L
Sbjct: 188 DTLKIGT-----DPALDHFMRSYVDMLTKFAEDLEEPFNKFMQFK-------DSTTKALE 235
Query: 284 GVSPGEGTGATMSDDDEDQVDSDANLF------DGSLEGPDTMGFGPLIPTESERSLMER 337
G+ G T +DD + D + D L + + + PL ES
Sbjct: 236 GIC-GHYVETTPDEDDNNGFDIGPMEYGAQASDDLYLPADENLMY-PLDIDESVVVDPMA 293
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+E+K L++ Y I +++ E R R+ GKLP S+LK W+ HS WPYP+
Sbjct: 294 SDEEIKKALRKKYGRHIGELKAEFNRVRKKGKLPSSARSILKDWFNRHSYWPYPS 348
>gi|340764132|gb|AEK69290.1| INVAGINATA-like protein [Linaria vulgaris]
Length = 346
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 39/223 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG--LVT 234
KA+I++HP Y +LL++ V C +I P + R+ + S +++G G G +
Sbjct: 92 KAKIMAHPHYHKLLASFVNCQKIGAPAEVTARL-------EEACSSAASIGRGHGTSCIG 144
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGEGTGA 293
+D LDQFM Y +L +++ L + R EA++ +E ++LT S G
Sbjct: 145 EDPALDQFMEAYCEMLTKYEQGLSKPFR----EAMLFLSRMECQFKALTVSSSDNSACGD 200
Query: 294 TMS--DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
M E++ D + N D P +R ELK +L + Y
Sbjct: 201 AMDRQGSSEEEADMNNNFID---------------PQAEDR--------ELKGQLLRKYS 237
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 238 GYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 280
>gi|8778590|gb|AAF79598.1|AC007945_18 F28C11.2 [Arabidopsis thaliana]
Length = 344
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 97/220 (44%), Gaps = 14/220 (6%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y +LL A++ C ++ P P I L + Q Y D
Sbjct: 83 KAKIACHPSYPRLLQAYIDCQKVGAP----PEIACLLEEIQRESDVYKQEVVPSSCFGAD 138
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +K L + EA +IE L++L TGV G M
Sbjct: 139 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSGGM 194
Query: 296 SDDDEDQVD---SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
S + + ++ N DG + + + G E R E ++LK L + +
Sbjct: 195 SPHGDKTISPLLTNDNGEDGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGS 252
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 253 RISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 292
>gi|255540617|ref|XP_002511373.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223550488|gb|EEF51975.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 328
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 104/216 (48%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
+A+I +HPLY +LL A++ C ++ P + +D ++ Q + + S + + G D
Sbjct: 88 RAKIAAHPLYPKLLQAYIDCQKVGAPPEMAYMLD-EIRQESDLSKRPSTITSCLGA---D 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K L + EA +IE L +L T +
Sbjct: 144 PELDEFMETYCDILVKYKSDLSRPFN----EATTFLNDIEAQLNTLCNT-----TTSRTH 194
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DE SD ++ G LE D++ R+ ER ELK +L Q Y I
Sbjct: 195 VSDEAVGSSDEDISGGELEAQDSV-----------RANEER---ELKDKLLQKYSGYIST 240
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E +K++ GKLP + +L +WW H KWPYPT
Sbjct: 241 LKQEFSKKKKKGKLPKEARQILLNWWNIHYKWPYPT 276
>gi|18389214|gb|AAL67666.1| hirzina [Antirrhinum majus]
Length = 353
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 107/226 (47%), Gaps = 37/226 (16%)
Query: 169 VNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA 228
N + KA+I++HP Y +LL+A+V C +I P P + ++L ++ ++++ +
Sbjct: 100 TNCDESSLKAKIMAHPHYHRLLAAYVNCHKIGAP----PEVVSRLEEAAAAMARHGTISV 155
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
G +D LDQ M Y +L ++++L + + EA++ IE ++LT VS
Sbjct: 156 G-----EDPGLDQLMEAYSEMLSKYEQELSKPFK----EAMLFLSRIESQFKALT-VSAA 205
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
G + E+++D + + D E ELK +L +
Sbjct: 206 RGEAMFRNGSSEEEIDVNNSFIDPQAED-----------------------IELKGQLLR 242
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 243 KYSGYLGSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 288
>gi|388556558|ref|NP_001253999.1| homeobox protein knotted-1-like 2-like [Glycine max]
gi|302135385|gb|ADK94035.1| KNOX-like DNA-binding protein [Glycine max]
Length = 385
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 34/223 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +L A++ C +I P + + R+ A A+ + + S++G+ + + D
Sbjct: 127 KAKIIAHPQYSNVLEAYMDCQKIGAPPEVVARMAA--AKQEFEARQRSSVGSRE--TSKD 182
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG-----VSPGEGT 291
ELDQFM Y +L ++E+L + ++ EA+ IE L L S +
Sbjct: 183 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLCNGPVRIFSDDKCE 238
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GA S++D+D + L P I +E +ELK+ L + Y
Sbjct: 239 GAGSSEEDQDNSGGETEL--------------PEIDPRAED-------RELKNHLLKKYS 277
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E+ +K++ GKLP D L +WW+ H KWPYP+ S
Sbjct: 278 GYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSES 320
>gi|85543292|gb|ABC71526.1| KNOTTED1 homeodomain protein [Panicum miliaceum]
Length = 334
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTD 235
KA+I+SHP Y LL+A++ C ++ P P + A+L A +Q + ++ G G T+
Sbjct: 97 KAKIISHPHYHSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATE 152
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 153 -PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLSISGRSLRNILSS 207
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 208 GSSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKMYSGYLS 248
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L WW H KWPYP+
Sbjct: 249 SLKQELSKKKKKGKLPKEARQQLLGWWDLHYKWPYPS 285
>gi|66865821|gb|AAY57559.1| knotted 1 [Zea mays]
Length = 211
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 100/216 (46%), Gaps = 27/216 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P P + A+L + V G +
Sbjct: 8 KAKIISHPHYYSLLTAYLECNKVGAP----PEVSARLTEIAQEVEARQRTALGGLAAATE 63
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ +
Sbjct: 64 PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSG 119
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 120 SSEEDQEGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSS 160
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L SWW H KWPYP+
Sbjct: 161 LKQELSKKKKKGKLPKEARQQLLSWWDQHYKWPYPS 196
>gi|4099826|gb|AAD00691.1| homeobox transcription factor SKN1 [Picea mariana]
Length = 433
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 109/226 (48%), Gaps = 24/226 (10%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 286
G D ELDQFM Y +L + E+L + + EA+ +IE SL
Sbjct: 224 GM-------DPELDQFMEAYCEILTKYHEELAKPFK----EAMTFLMKIEAQFNSL---- 268
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
G+GT +S E+ ++ GS E + G E + +E +ELK L
Sbjct: 269 -GKGT-IRISPPAENDEKTEGG---GSSEEVEDGSGGETDFQEVDHHAVED--RELKDHL 321
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 322 LRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWSLHDKWPYPS 367
>gi|329757147|gb|AEC04753.1| knotted-like homeobox KNOX4 [Fragaria vesca]
Length = 348
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 113/260 (43%), Gaps = 18/260 (6%)
Query: 148 NNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLP 207
+N+ST + V V G + A+I SHPLY LL A++ C ++ P P
Sbjct: 58 SNSSTVSDCVSVAVAGNQRGGEEVSCTDFNAKIASHPLYPNLLQAYIDCQKVGAP----P 113
Query: 208 RIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAME 267
+ L + + + S G + D ELD+FM Y +L +K L + E
Sbjct: 114 ELAHILEKIRRESDQLSRRTVGSTCMGVDPELDEFMETYCGILLKYKSDLTKPFN----E 169
Query: 268 AVMACWEIEQSLQSLTGVSPGEGTGATMSDDD-EDQVDSDANLFDGSLEGP-------DT 319
A+ +E L +L G + +G D + + FD + P +
Sbjct: 170 AITFLNSMETQLNNLAGANTTKGVLMQTRDSRISGMMKLNYWCFDHEDDAPPGNSSDYED 229
Query: 320 MGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK 379
M G + +S+ V ELK +L + Y I +++E +K++ GKLP D +L
Sbjct: 230 MSGGEIDVQDSDHQ-QRNVNHELKDKLLRKYSGYISTLKQEFSQKKKKGKLPKDAKQILA 288
Query: 380 SWWQSHSKWPYPT-VSPVTL 398
WW H KWPYPT V +TL
Sbjct: 289 DWWNLHYKWPYPTEVDKMTL 308
>gi|297813269|ref|XP_002874518.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
lyrata]
gi|297320355|gb|EFH50777.1| hypothetical protein ARALYDRAFT_489727 [Arabidopsis lyrata subsp.
lyrata]
Length = 395
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/228 (30%), Positives = 108/228 (47%), Gaps = 39/228 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL----AQSQHVVSKYSALGAGQGL 232
KA+I++HP Y LL A++ C +I P + + RI A A+ Q SA
Sbjct: 131 KAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDRITAARQDFEARQQRPTPSVSA------- 183
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV------S 286
+ D ELDQFM Y +L ++E+L + ++ AME + IE L L +
Sbjct: 184 SSRDPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQLSMLCQSPIHILNN 239
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
P +G M DE+Q N G E P+ + P +R ELK+ L
Sbjct: 240 PADGKSEGMGSSDEEQ----ENTSGGETELPE------IDPRAEDR--------ELKNHL 281
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 282 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 329
>gi|6016215|sp|O04134.1|KNAP1_MALDO RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=KNAP1
gi|1946218|emb|CAA96510.1| kn1-like protein [Malus x domestica]
Length = 398
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 109/232 (46%), Gaps = 36/232 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y L+ A++ C R+ P D +PR+ Q ++ + G + + D
Sbjct: 134 KAKIIAHPQYSNLVEAYMDCQRVGAPSDVVPRLSVA---RQEFEARQRSSGTSRE-TSKD 189
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---------VSP 287
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 190 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNNAPPLRIFSP 245
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
E + +++Q +S G E P+ + P +R ELK+ L
Sbjct: 246 SEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLL 286
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+ S L
Sbjct: 287 RKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVAL 338
>gi|160420034|dbj|BAF93480.1| class-I knotted1-like homeobox protein IBKN3 [Ipomoea batatas]
Length = 266
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 33/222 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C ++ P + + R+ A + Q + + LG G+ + + D
Sbjct: 5 KAKIIAHPQYSNLLEAYMDCQKVGAPPEVVARL-AAVRQEFEARQRAAGLG-GRDISSKD 62
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV------SPGEG 290
ELDQFM Y +L ++E+L + ++ EA+ IE L L+ S +
Sbjct: 63 PELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMRRIESQLNMLSNAPVRVFTSDDKC 118
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
G S+DD+D + L P I +E +ELK+ L + Y
Sbjct: 119 EGVGSSEDDQDNSGGETEL--------------PEIDPRAED-------RELKNHLLRKY 157
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E+ +K++ GKLP + L +WW+ H KWPYP+
Sbjct: 158 SGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 199
>gi|351723761|ref|NP_001238058.1| homeobox protein SBH1 [Glycine max]
gi|1170312|sp|P46608.1|HSBH1_SOYBN RecName: Full=Homeobox protein SBH1
gi|485406|gb|AAA20882.1| SBH1 [Glycine max]
Length = 379
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 32/220 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P + + R++ A + + +A AG + +D
Sbjct: 125 KAKIMAHPHYHRLLAAYVNCQKVGAPPEVVARLEEACASAATMAGGDAA--AGSSCIGED 182
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
LDQFM Y +L ++++L + ++ EA++ IE ++LT S G
Sbjct: 183 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSSDFASNEGGD 238
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E+ VD N+ D P +R +LK +L + Y +
Sbjct: 239 RNGSSEEDVDLH-NMID---------------PQAEDR--------DLKGQLLRKYSGYL 274
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 275 GSLKQEFMKKRKKGKLPKEARQQLLEWWNRHYKWPYPSES 314
>gi|326525409|dbj|BAK07974.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 364
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 111/220 (50%), Gaps = 31/220 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G G T+
Sbjct: 109 KAKIISHPHYSSLLAAYLDCQKVGAPPEVSARLTA-VAQDLELRQR-TALG-GLGTATE- 164
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT--GVSPGEGTGAT 294
ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ G S
Sbjct: 165 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLSISGRSLRNILSTG 220
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
S++D++ + L + G D QELKH L + Y +
Sbjct: 221 SSEEDQEGSGGETELAEIDAHGVD---------------------QELKHHLLKKYSGYL 259
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP + L SWW+ H KWPYP+ S
Sbjct: 260 SSLKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSES 299
>gi|285804237|gb|ADC35599.1| class I KNOX homeobox transcription factor STM-like 1 [Prunus
persica]
Length = 329
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 34/222 (15%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R +A+I++HPL+ +LL+++V+C ++ P + + R++ + + H S+ + LG G
Sbjct: 69 RMEAKIMAHPLFPRLLASYVSCQKVGAPPEVVARLEQACSAAVHN-SEAACLGGGD---- 123
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT----GVSPGEG 290
D LDQFM Y +L ++E+L + + EA++ +I+ LQ+LT S G
Sbjct: 124 PDPALDQFMEAYCEMLTKYEEELTKPFK----EAMLFLSKIDSQLQALTVHSSSDSASSG 179
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
++VD+ TM + P +R ELK +L + Y
Sbjct: 180 DNIVGRSGSPEEVDA-------------TMNESCIDPRAEDR--------ELKAKLLRKY 218
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E ++K++ GKLP + L WW H KWPYP+
Sbjct: 219 TGYLGSLKQEFMKKKKNGKLPKEARHQLLDWWSRHYKWPYPS 260
>gi|85543304|gb|ABC71532.1| KNOTTED1-like homeodomain protein [Pharus lappulaceus]
Length = 336
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 109/220 (49%), Gaps = 31/220 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS--KYSALGAGQGLVT 234
KA+I+SHP Y LL+A++ C ++ P P + +L H + + +ALG G G
Sbjct: 86 KAKIISHPHYSSLLAAYLDCQKVGAP----PEVATRLTAVAHELEARQRTALG-GLGAAM 140
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELDQFM Y +L ++E+L + ++ EA+ ++E L SL+ +
Sbjct: 141 E-PELDQFMEAYHEMLVKYREELARPLQ----EAMEFLRKVELQLNSLSISGRSLRNILS 195
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+EDQ S G E P+ G V QELKH+L + Y +
Sbjct: 196 SGSSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHQLLKKYSGYL 236
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP D L +WW+ H KWPYP+ S
Sbjct: 237 STLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSES 276
>gi|3046821|dbj|BAA25546.1| NTH15 [Nicotiana tabacum]
Length = 342
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 102/219 (46%), Gaps = 38/219 (17%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LLSA+V C +I P + + R++ A S + + S G++ +D LD
Sbjct: 92 MAHPHYPRLLSAYVNCQKIGAPPEVVARLEEVCATSA-TIGRNSG-----GIIGEDPALD 145
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD- 299
QFM Y +L ++++L + + EA++ IE ++LT S E A D
Sbjct: 146 QFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALTLTSSSESVAALGEAIDR 201
Query: 300 ----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
E++VD + D E QELK +L + Y +
Sbjct: 202 NGSSEEEVDVNNGFIDPQAED-----------------------QELKGQLLRKYSGYLG 238
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 239 SLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 277
>gi|300174940|dbj|BAJ10705.1| shoot meristemless ortholog [Hydrobryum japonicum]
Length = 351
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 105/216 (48%), Gaps = 30/216 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHPLY +LLSA+V C ++ P + + + + +ALG + D
Sbjct: 100 KAKIMSHPLYNRLLSAYVNCQKVGAPPEVV------ARLEEARAAAAAALGPSDACLGQD 153
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G
Sbjct: 154 PALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVEYQFKALTVSSPNSGYSG--- 206
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+ +E SD EG G I ++E QELK +L + Y +
Sbjct: 207 EANERNASSDE-------EGD---GNNVFIDPQAED-------QELKGQLLRRYSGYLGS 249
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 250 LKQEFMKKRKKGKLPKEARQQLLDWWNRHYKWPYPS 285
>gi|5103725|dbj|BAA79224.1| knotted1-type homeobox protein OSH6 [Oryza sativa]
Length = 301
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 32/222 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + A L + + G G G + D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEV-ASLLKEIGRERRAGGGGGGAGQIGVD 98
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +KE+L + EA I+ L +L +G + T AT
Sbjct: 99 PELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATH 154
Query: 296 SDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
SD+ DEDQ + ++ D I E L + ELK L + Y
Sbjct: 155 SDEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKY 197
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 198 SGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239
>gi|3327275|dbj|BAA31701.1| PKn3 [Ipomoea nil]
Length = 358
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 115/253 (45%), Gaps = 34/253 (13%)
Query: 142 ANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIAT 201
++++N N+ N+K G VE +D V KA+I SHPLY L+SA++ C ++A
Sbjct: 73 SSNDNYYNSDENSKGGGGGVEMMSDVV--------KAQIASHPLYPNLVSAYIQCRKVAA 124
Query: 202 PVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHV 261
P P + A L + V + G D ELD+FM Y +L +KE+L +
Sbjct: 125 P----PEMAALLEELSKVTQPITTAEIGA-----DPELDEFMESYCEVLYKYKEELSKPF 175
Query: 262 RVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMG 321
EA IE L +L + + + DE S+ +L G +E
Sbjct: 176 D----EAKTFLSSIESQLSNLCKDTFPTTSFNSYHSGDEAGGTSEEDLSCGEVE------ 225
Query: 322 FGPLIPTESERSLMERVR--QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLK 379
ES+ L Q++K L + Y + +R+E L+KR+ GKLP D L
Sbjct: 226 -----VAESQEHLNNNSEGDQQIKEMLMRKYSGYLSSLRKEFLKKRKKGKLPKDARVALL 280
Query: 380 SWWQSHSKWPYPT 392
WW SH +WPY T
Sbjct: 281 DWWNSHYRWPYTT 293
>gi|449447321|ref|XP_004141417.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 335
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 123/251 (49%), Gaps = 33/251 (13%)
Query: 146 NMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQ 205
N+NN ++ +GVV+++ KA+IL+HP Y LL A++ C ++ P
Sbjct: 38 NVNNFHLQQGTDFTSCRPEQNGVVDFEAI--KAKILAHPQYSSLLEAYMECQKVGAPPQV 95
Query: 206 LPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHA 265
+ R+ A A+ + + S++ +G+ + D ELDQFM Y +L ++E+L + ++
Sbjct: 96 VERLVA--ARQEFEARQRSSMVSGETI--KDPELDQFMEAYYDMLVKYREELSRPIQ--- 148
Query: 266 MEAVMACWEIEQSLQSLTG----VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMG 321
EA+ IE L SL + + M +E+Q +S G E P+
Sbjct: 149 -EAMDFMRRIESQLTSLCNGPVRIFNSDDKCDGMGSSEEEQENSG-----GETELPE--- 199
Query: 322 FGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSW 381
+ P +R ELK+ L + Y + +++E+ +K++ GKLP + L +W
Sbjct: 200 ---IDPRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNW 248
Query: 382 WQSHSKWPYPT 392
W+ H KWPYP+
Sbjct: 249 WELHYKWPYPS 259
>gi|357441887|ref|XP_003591221.1| Homeobox transcription factor KN2 [Medicago truncatula]
gi|355480269|gb|AES61472.1| Homeobox transcription factor KN2 [Medicago truncatula]
Length = 268
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 35/243 (14%)
Query: 154 NKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL 213
N+S+ + ++ D ++ K +I +HPLY LLSA + C ++ P +L + ++
Sbjct: 4 NRSDLIRLDMTTDRII-------KNQIATHPLYPNLLSAFLECQKVGAPT-ELASLLEEI 55
Query: 214 AQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACW 273
+ H + + +G DD +LD FM Y +L +KE+L + + EA +
Sbjct: 56 GRESHPNNAFREIG-------DDPDLDHFMESYCEVLHRYKEELSKPLN----EATLFLC 104
Query: 274 EIEQSLQSLTGVSPGEGTGATMSD----DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTE 329
IE L L +GT SD D E S+ + G +E + G L T
Sbjct: 105 NIESQLNELC-----KGTQTMSSDYNRSDHEAAGTSEDEMSCGKVEAVEG-GHDELCGTS 158
Query: 330 SERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWP 389
+ELK L + Y + ++R+E L+KR+ GKLP D L WW H +WP
Sbjct: 159 CPGD------KELKEMLLRKYGGYLSNLRQEFLKKRKKGKLPKDARKALMDWWNVHYRWP 212
Query: 390 YPT 392
YPT
Sbjct: 213 YPT 215
>gi|115436138|ref|NP_001042827.1| Os01g0302500 [Oryza sativa Japonica Group]
gi|75171952|sp|Q9FP29.1|KNOS1_ORYSJ RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=Homeobox protein HOS16; AltName: Full=Homeobox
protein OSH6
gi|11967917|dbj|BAB19772.1| putative knotted1-type homeobox protein [Oryza sativa Japonica
Group]
gi|21104563|dbj|BAB93157.1| knotted1-type homeobox protein OSH6 [Oryza sativa Japonica Group]
gi|113532358|dbj|BAF04741.1| Os01g0302500 [Oryza sativa Japonica Group]
Length = 301
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 103/222 (46%), Gaps = 32/222 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + A L + + G G G + D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEV-ASLLKEIGRERRAGGGGGGAGQIGVD 98
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +KE+L + EA I+ L +L +G + T AT
Sbjct: 99 PELDEFMEAYCRVLVRYKEELSRPFD----EAASFLSSIQTQLSNLCSGATSPPATTATH 154
Query: 296 SDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
SD+ DEDQ + ++ D I E L + ELK L + Y
Sbjct: 155 SDEMVGSSDEDQCSGETDMLD--------------IGQEQSSRLAD---HELKEMLLKKY 197
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 198 SGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 239
>gi|211926930|dbj|BAG82674.1| KN1-type homeobox transcription factor [Triticum aestivum]
Length = 306
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 98/217 (45%), Gaps = 24/217 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ-SQHVVSKYSALGAGQGLVTD 235
KA+I HP Y LLSA++ C ++ P P + A L + Q A AG+ +
Sbjct: 48 KAQIAGHPRYPSLLSAYIECRKVGAP----PEVAALLEEIGQPERRGGGATAAGE--IGL 101
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D ELD+FM Y LL +KE+L + + EA I L +L G GT AT
Sbjct: 102 DPELDEFMEAYCRLLSRYKEELSRPLD----EAASFLTTIRSQLTNLCG----GGTTATS 153
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
DE S+ G +G D + S R ELK L + Y +
Sbjct: 154 PHSDEMVGSSEDEPCSGDADGSDAG-----MQEHSSR----LADHELKEMLLKKYSGCLS 204
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 205 RLRSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPT 241
>gi|15236418|ref|NP_192555.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
gi|1170676|sp|P46639.1|KNAT1_ARATH RecName: Full=Homeobox protein knotted-1-like 1; AltName:
Full=Protein BREVIPEDICELLUS; AltName: Full=Protein
KNAT1
gi|4689449|gb|AAD27897.1|AC006267_2 KNAT1 homeobox-like protein [Arabidopsis thaliana]
gi|606950|gb|AAA67881.1| knotted-like homeobox protein [Arabidopsis thaliana]
gi|7267455|emb|CAB81151.1| KNAT1 homeobox-like protein [Arabidopsis thaliana]
gi|19424027|gb|AAL87309.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
gi|21280867|gb|AAM45030.1| putative KNAT1 homeobox protein [Arabidopsis thaliana]
gi|332657197|gb|AEE82597.1| homeobox protein knotted-1-like 1 [Arabidopsis thaliana]
Length = 398
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 40/228 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL----AQSQHVVSKYSALGAGQGL 232
KA+I++HP Y LL A++ C +I P D + RI A A+ Q SA
Sbjct: 135 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSA------- 187
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP----- 287
+ D ELDQFM Y +L ++E+L + ++ AME + IE L S+ SP
Sbjct: 188 SSRDPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQL-SMLCQSPIHILN 242
Query: 288 -GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
+G M DE+Q ++ G E P+ + P +R ELK+ L
Sbjct: 243 NPDGKSDNMGSSDEEQENNSG----GETELPE------IDPRAEDR--------ELKNHL 284
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 285 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 332
>gi|300676309|gb|ADK26524.1| HERMIT-like protein 3 [Petunia x hybrida]
Length = 331
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 104/224 (46%), Gaps = 28/224 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQH--VVSKYSALGAGQGLVT 234
KA+I +HPLY L+SA++ C ++ P ++ I ++++ H + S +S++ G
Sbjct: 61 KAQIANHPLYPNLVSAYLQCRKVGAP-HEMASILEEISKENHQPISSCHSSIEIGT---- 115
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT------GVSPG 288
D ELD+FM Y +L +KE+L + EA IE L +L +
Sbjct: 116 -DPELDEFMESYCAVLLKYKEELSKPFD----EATTFLNNIESQLTNLCKDNLITSTTTS 170
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
DE SD ++ G +E D G P E ELK L +
Sbjct: 171 SFNSNNYLSGDEAGGTSDEDICCGEMEATD----GQESPANREG------ENELKEMLMR 220
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +R++ L+KR+ GKLP D + L WW +H +WPYPT
Sbjct: 221 KYSGYLSSLRKDFLKKRKKGKLPKDARTALLDWWNTHYRWPYPT 264
>gi|300174964|dbj|BAJ10717.1| shoot meristemless ortholog [Terniopsis minor]
Length = 379
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 109/218 (50%), Gaps = 29/218 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y +LL+A+V C ++ P P + A+L +++ + A G + D
Sbjct: 126 KAKIMSHPHYTRLLAAYVNCQKVGAP----PEVVARLEEARAAAAMGPAGVVGSSCIGLD 181
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + ++ EA++ +E +SLT SP +G
Sbjct: 182 PALDQFMEAYCEMLIKYEQELSKPLK----EAMLFLQRVEYQFKSLTVSSPNSDSG---- 233
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DAN + S E +T G I ++E ELK +L + Y +
Sbjct: 234 ---------DANDRNASSEE-ETEGNNMFIDPQAED-------HELKGQLLRRYSGYLGS 276
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 277 LKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 314
>gi|20977646|gb|AAM28232.1| knotted-1-like protein 2 [Helianthus annuus]
Length = 358
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 115/242 (47%), Gaps = 41/242 (16%)
Query: 168 VVNWQNA--RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA 225
+VN+ N KA+I+SHP Y LL A++ C ++ P + + R+ A + ++ + +
Sbjct: 75 MVNFHNEDEALKAKIISHPHYSNLLQAYMDCQKVGAPPEVVGRLTA--VRQEYEARQRAN 132
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-- 283
LG + D ELDQFM Y +L +KE+L + ++ EA+ IE L +LT
Sbjct: 133 LGCRENY--KDPELDQFMEAYYDMLIKYKEELTRPIQ----EAMEFMRRIESQLSTLTIS 186
Query: 284 -----------GVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESER 332
+SP E + DE+Q ++ G E + P +R
Sbjct: 187 SSSSSSPAGRIFISPDESKCEVIGSSDEEQENTSG----GETE------VAEIDPRAEDR 236
Query: 333 SLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK+ L + Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 237 --------ELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 288
Query: 393 VS 394
S
Sbjct: 289 ES 290
>gi|194695204|gb|ACF81686.1| unknown [Zea mays]
gi|408690268|gb|AFU81594.1| HB-type transcription factor, partial [Zea mays subsp. mays]
gi|414873087|tpg|DAA51644.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 364
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 122/266 (45%), Gaps = 44/266 (16%)
Query: 130 IIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQL 189
++A SA +A+ + A+ + V+ AD + KA I+SHP Y L
Sbjct: 64 LLADPSSAAQHSASHRTKDMATVQGEMSSPAVDGDADAI--------KARIMSHPQYSAL 115
Query: 190 LSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT---DDKELDQFMTHY 246
L+A++ C ++ P D R+ A A ++ ++ + +G T DD ELDQFM Y
Sbjct: 116 LAAYLDCQKVGAPPDVSDRLSAMAAA--NLDAQPGPISRRRGPTTTRADDPELDQFMEAY 173
Query: 247 VLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSD 306
+L F E++ + ++ EA +E+ L G+T+SD + + S
Sbjct: 174 CNMLVKFHEEMARPIQ----EATEFFNSMERQL------------GSTISDSNCEVAGSS 217
Query: 307 ANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRR 366
+ D S P E + ++ ELKH+L + Y + +R+E ++++
Sbjct: 218 EDEQDASW------------PEEIDPCAEDK---ELKHQLLRKYGGYLGGLRQEFSKRKK 262
Query: 367 AGKLPGDTTSVLKSWWQSHSKWPYPT 392
GKLP + L WW+ H KWPYP+
Sbjct: 263 KGKLPKEARQKLLHWWELHYKWPYPS 288
>gi|449526764|ref|XP_004170383.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 369
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 117/231 (50%), Gaps = 33/231 (14%)
Query: 166 DGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA 225
+GVV+++ KA+IL+HP Y LL A++ C ++ P + R+ A A+ + + S+
Sbjct: 101 NGVVDFEAI--KAKILAHPQYSSLLEAYMECQKVGAPPQVVERLVA--ARQEFEARQRSS 156
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG- 284
+ +G+ + D ELDQFM Y +L ++E+L + ++ EA+ IE L SL
Sbjct: 157 MVSGETI--KDPELDQFMEAYYDMLVKYREELSRPIQ----EAMDFMRRIESQLTSLCNG 210
Query: 285 ---VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE 341
+ + M +E+Q +S G E P+ + P +R E
Sbjct: 211 PVRIFNSDDKCDGMGSSEEEQENSG-----GETELPE------IDPRAEDR--------E 251
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LK+ L + Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+
Sbjct: 252 LKNHLLRKYSGYLSSLKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 302
>gi|2522484|gb|AAB81079.1| knotted class 1 homeodomain protein [Hordeum vulgare subsp.
vulgare]
Length = 364
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/218 (32%), Positives = 110/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP + LL+A++ C ++ P + R+ A +AQ + + +ALG G G T+
Sbjct: 109 KAKIISHPHHSSLLAAYLDCQKVGAPPEVSARLTA-VAQDLELRQR-TALG-GLGTATE- 164
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L SL+ +
Sbjct: 165 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNSLSISVRSLRNILSTG 220
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 221 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 261
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP + L SWW+ H KWPYP+ S
Sbjct: 262 LKQELSKKKKKGKLPKEARQQLLSWWEMHYKWPYPSES 299
>gi|363807946|ref|NP_001242710.1| uncharacterized protein LOC100805837 [Glycine max]
gi|255642659|gb|ACU21614.1| unknown [Glycine max]
Length = 350
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 31/220 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P + + R++ A S ++ +A AG + +D
Sbjct: 95 KAKIMAHPHYRRLLAAYVNCQKVGAPPEVVARLEEACA-SAATMAGDAAAAAGSSCIGED 153
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT--GAT 294
LDQFM Y +L ++++L + ++ EA++ IE ++LT S GA
Sbjct: 154 PALDQFMEAYCEMLTKYEQELSKPLK----EAMLFLQRIECQFKNLTISSTDFACNEGAE 209
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E+ VD N+ D P +R ELK +L + Y +
Sbjct: 210 RNGSSEEDVDLH-NMID---------------PQAEDR--------ELKGQLLRKYSGYL 245
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 246 GSLKQEFMKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 285
>gi|226529576|ref|NP_001149876.1| KNOX1 domain containing protein [Zea mays]
gi|195635197|gb|ACG37067.1| KNOX1 domain containing protein [Zea mays]
Length = 360
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 28/223 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT-- 234
KA+I+SHP Y +LL+A + C ++ P + I +A+ + + A G V
Sbjct: 76 KAKIVSHPSYHRLLAAFLDCHKVGCPPEAAEEI-XXVAREREAWQR-----AASGDVAHT 129
Query: 235 -DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGT 291
D ELDQFM Y LL ++KE+L + +R EA +E L S+T P G
Sbjct: 130 RPDPELDQFMESYCELLVTWKEELTRPLR----EAEEFLTTVEAQLNSITNTGPTMGAFI 185
Query: 292 GATMSDDDEDQVD-SDANLFDGS-LEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
+ + D VD SD +GS +E +G P +ELK +L +
Sbjct: 186 SSAAAADKTGVVDMSDDEQEEGSGMEAEVALGIDPCSDD-----------KELKKQLLRK 234
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + ++R+E+ +KR+ KLP + L SWW+ H +WPYP+
Sbjct: 235 YSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPS 277
>gi|57116570|gb|AAW33773.1| STM1 protein [Streptocarpus dunnii]
Length = 356
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 116/248 (46%), Gaps = 42/248 (16%)
Query: 153 NNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQ 212
+N S G G DGV K++I++HP Y +LL+A+V C +I P + + +++
Sbjct: 80 SNTSTGYYFMEG-DGVAG--GGSVKSKIMAHPHYPRLLAAYVNCQKIGAPPEVVAKLEEA 136
Query: 213 LAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMAC 272
A + + + + V +D LDQFM Y +L ++++L + + EA++
Sbjct: 137 CASTITIGGRNE-----RSCVGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFL 187
Query: 273 WEIEQSLQSLTGVSPGEGTGAT------MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLI 326
IE ++LT +S +GA + E++ D + + D
Sbjct: 188 SRIECQFKALT-LSHSSDSGACGEAVMERNGSSEEEFDVNNSFID--------------- 231
Query: 327 PTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHS 386
P +R ELK +L + Y + ++++E ++KR+ GKLP + L WW H
Sbjct: 232 PQAEDR--------ELKGQLLRRYSGYLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHY 283
Query: 387 KWPYPTVS 394
KWPYP+ S
Sbjct: 284 KWPYPSES 291
>gi|33333531|gb|AAQ11882.1| knotted 1 [Hordeum vulgare]
Length = 349
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 101/227 (44%), Gaps = 45/227 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I++HP Y LL A++ C ++ P D L R+ A + +K A G+ D
Sbjct: 89 KTKIMAHPQYTALLVAYLDCQKVGAPPDVLERLTA-------MAAKLDAHTPGRLHEARD 141
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG-------- 288
ELDQFM Y +L ++E+L + + EA+ +E L S+TG G
Sbjct: 142 PELDQFMEAYCNMLAKYREELTRPIE----EAMEFLKRVEAQLDSITGGGHGSAPLSLAA 197
Query: 289 ---EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
EG G++ D D +++ D E D LK++
Sbjct: 198 GKYEGVGSSEDDMDASGRENEPPEIDPRAEDKD-----------------------LKYQ 234
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 235 LLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 281
>gi|289655986|gb|ADD14041.1| class 1 KNOTTED-like transcription factor STM-like1 [Prunus
persica]
Length = 329
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 110/222 (49%), Gaps = 34/222 (15%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R +A+I++HPL+ +LL+++V+C ++ P + + R++ + + H S+ + LG G
Sbjct: 69 RMEAKIMAHPLFPRLLASYVSCQKVGAPPEVVARLEQACSAAVHN-SEAACLGGGD---- 123
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT----GVSPGEG 290
D LD+FM Y +L ++E+L + + EA++ +I+ LQ+LT S G
Sbjct: 124 PDPALDKFMEAYCEMLTKYEEELTKPFK----EAMLFLSKIDSQLQALTVHSSSDSASSG 179
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
++VD+ TM + P +R ELK +L + Y
Sbjct: 180 DNIVGRSGSPEEVDA-------------TMNESCIDPRAEDR--------ELKAKLLRKY 218
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E ++K++ GKLP + L WW H KWPYP+
Sbjct: 219 TGYLGSLKQEFMKKKKNGKLPKEARHQLLDWWSRHYKWPYPS 260
>gi|19908859|gb|AAM03026.1|AF482994_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
Length = 400
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 40/228 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL----AQSQHVVSKYSALGAGQGL 232
KA+I++HP Y LL A++ C +I P D + RI A A+ Q SA
Sbjct: 137 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSA------- 189
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP----- 287
+ D ELDQFM Y +L ++E+L + ++ AME + IE L S+ SP
Sbjct: 190 SSRDPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQL-SMLCQSPIHILN 244
Query: 288 -GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
+G M DE+Q ++ G E P+ + P +R ELK+ L
Sbjct: 245 NPDGKSDNMGSSDEEQENNSG----GETELPE------IDPRAEDR--------ELKNHL 286
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 287 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 334
>gi|540536|dbj|BAA03959.1| homeobox protein [Oryza sativa Japonica Group]
Length = 361
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G T+
Sbjct: 105 KAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTA-VAQDLELRQR-TALGV-LGAATE- 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L +L+ +
Sbjct: 161 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP D L +WW+ H KWPYP+ S
Sbjct: 258 LKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSES 295
>gi|19908861|gb|AAM03027.1|AF482995_1 homeodomain protein KNAT1/BP [Arabidopsis thaliana]
Length = 400
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 40/228 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL----AQSQHVVSKYSALGAGQGL 232
KA+I++HP Y LL A++ C +I P D + RI A A+ Q SA
Sbjct: 137 KAKIIAHPHYSTLLQAYLDCQKIGAPPDVVDRITAARQDFEARQQRSTPSVSA------- 189
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP----- 287
+ D ELDQFM Y +L ++E+L + ++ AME + IE L S+ SP
Sbjct: 190 SSRDPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQL-SMLCQSPIHILN 244
Query: 288 -GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
+G M DE+Q ++ G E P+ + P +R ELK+ L
Sbjct: 245 NPDGKSDNMGSSDEEQENNSG----GETELPE------IDPRAEDR--------ELKNHL 286
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 287 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 334
>gi|371767716|gb|AEX56213.1| knotted-like 3 protein, partial [Dactylorhiza fuchsii]
Length = 287
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 111/220 (50%), Gaps = 23/220 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS--KYSALGAGQGLVT 234
KA+I+SHP Y LL+A++ C ++ P P + A+L+ + H + + +ALG +G
Sbjct: 69 KAKIISHPQYPALLTAYMDCQKVGAP----PEVIARLSAAAHELEGRQLAALGCRRG-SP 123
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D ELDQFM Y +L +KEQL + V+ EA+ +IE L SLT G T A
Sbjct: 124 ADPELDQFMEAYCNMLVKYKEQLTRPVQ----EAMDFLRKIESQLNSLTY---GTTTAAP 176
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG--YKE 352
D D S E D G E+E + ++ ++ + +L Y
Sbjct: 177 FLSS-ADLADEKCEGVVSSEEDQDAGG------AEAEVAELDPRAEDKELKLHLLKKYSG 229
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E+ +K++ GKLP D L +WW+ H KWPYP+
Sbjct: 230 YLSSLRQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 269
>gi|984046|emb|CAA57122.1| ATK1 [Arabidopsis thaliana]
gi|984048|emb|CAA57121.1| ATK1 [Arabidopsis thaliana]
Length = 311
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHV----VSKYSA 225
N+ + K++I SHPLY +LL ++ C ++ P+ ++ I ++ + HV V+ S
Sbjct: 63 NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC 121
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV 285
GA D ELD+FM Y +L +K L + EA +IE LQ+L
Sbjct: 122 FGA-------DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT- 169
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
G + +SDD V SD L + D +S++ +R +LK +
Sbjct: 170 --GPASATALSDDG--AVSSDEELREDDDIAAD----------DSQQRSNDR---DLKDQ 212
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + + I ++ E +K++ GKLP + L WW H+KWPYPT
Sbjct: 213 LLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
>gi|42563111|ref|NP_177208.2| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
gi|21431769|sp|P46640.3|KNAT2_ARATH RecName: Full=Homeobox protein knotted-1-like 2; AltName:
Full=Protein ATK1; AltName: Full=Protein KNAT2
gi|606952|gb|AAA67882.1| knotted-like homeobox protein [Arabidopsis thaliana]
gi|332196952|gb|AEE35073.1| homeobox protein knotted-1-like 2 [Arabidopsis thaliana]
Length = 310
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 34/227 (14%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHV----VSKYSA 225
N+ + K++I SHPLY +LL ++ C ++ P+ ++ I ++ + HV V+ S
Sbjct: 63 NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC 121
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV 285
GA D ELD+FM Y +L +K L + EA +IE LQ+L
Sbjct: 122 FGA-------DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT- 169
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
G + +SDD V SD L + D +S++ +R +LK +
Sbjct: 170 --GPASATALSDDG--AVSSDEELREDDDIAAD----------DSQQRSNDR---DLKDQ 212
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + + I ++ E +K++ GKLP + L WW H+KWPYPT
Sbjct: 213 LLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 259
>gi|108885278|sp|P46609.2|KNOS6_ORYSJ RecName: Full=Homeobox protein knotted-1-like 6; AltName:
Full=Homeobox protein OSH1; AltName: Full=Homeobox
protein knotted-1-like 1; Short=Oskn1
gi|478420|pir||JQ2379 homeobox 1 protein OSH1 - rice
gi|41469276|gb|AAS07158.1| homeobox 1 protein OSH1 [Oryza sativa Japonica Group]
gi|108710856|gb|ABF98651.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
gi|108710857|gb|ABF98652.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
gi|284431774|gb|ADB84628.1| homeobox protein [Oryza sativa Japonica Group]
Length = 361
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 109/218 (50%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ C ++ P + R+ A +AQ + + +ALG G T+
Sbjct: 105 KAKIISHPHYSSLLAAYLDCQKVGAPPEVAARLTA-VAQDLELRQR-TALGV-LGAATE- 160
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ +E L +L+ +
Sbjct: 161 PELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSSG 216
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 217 SSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLSS 257
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP D L +WW+ H KWPYP+ S
Sbjct: 258 LKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSES 295
>gi|255568864|ref|XP_002525403.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223535366|gb|EEF37041.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 337
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 99/218 (45%), Gaps = 31/218 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA-LGAGQGLVTD 235
KA+I SHP Y +LL A++ C ++ P P I L + + Y GA V
Sbjct: 97 KAKIASHPSYPRLLHAYIDCQKVGAP----PEIAGLLDEIRRENDMYKGDGGAASTCVGA 152
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D ELD+FM Y +L +K L++ EA +IE L++L TGA++
Sbjct: 153 DPELDEFMETYCDVLLKYKSDLEKPFD----EATTFLNKIEMQLRNLC-------TGASV 201
Query: 296 SD-DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
S DE SD L G LE + P+ +R L +R L + + I
Sbjct: 202 STLSDEGAPSSDEELSGGELEAQEAQ------PSSKDRDLKDR--------LFRRFGSHI 247
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 248 STLKLEFSKKKKKGKLPKEARQTLLEWWNVHYKWPYPT 285
>gi|345649237|gb|AEO14149.1| KNAT1 protein [Eschscholzia californica subsp. californica]
Length = 405
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 115/226 (50%), Gaps = 41/226 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS--QHVVSKYSALGAGQGLVT 234
KA+I++HP Y LL A++ C ++ P P + + L Q+ + V + S++ G LV+
Sbjct: 144 KAKIIAHPQYFNLLDAYMDCQKVGAP----PEVVSWLTQARQEFVERQKSSVNCGDKLVS 199
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP------- 287
D ELDQFM Y +L ++E+L + ++ EA+ +IE L +L P
Sbjct: 200 ADPELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMRKIEAQLNTLCINGPIRVFTDE 255
Query: 288 -GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
EG G++ +EDQ +S G E P+ + P +R ELK+ L
Sbjct: 256 KCEGAGSS----EEDQENSA-----GETELPE------IDPRAEDR--------ELKNHL 292
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E+ +K++ GKLP D L +WW+ H KWPYP+
Sbjct: 293 LKKYSGYLSSLKKELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 338
>gi|195627526|gb|ACG35593.1| homeotic protein knotted-1 [Zea mays]
Length = 298
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P ++ + ++ + + +A AG +V D
Sbjct: 47 KAQIAGHPRYPSLLSAYIDCRKVGAP-SEVATLLEEIGRE-----RCAAASAGGEVVGMD 100
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y LL +KE+L + EA + L SL G + S
Sbjct: 101 PELDEFMETYCRLLERYKEELSRPFD----EAASFLSSVRTQLSSLCGGAASLSDEMVES 156
Query: 297 DDDED-QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+DE D+DA G E L +R ELK L + Y +
Sbjct: 157 SEDEPCSGDTDATTDPGQ---------------EHSSRLADR---ELKEMLLKKYSGCLS 198
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 199 RLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 235
>gi|302398825|gb|ADL36707.1| HD domain class transcription factor [Malus x domestica]
Length = 398
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 36/232 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y L+ A++ C R P D +PR+ Q ++ + G + + D
Sbjct: 134 KAKIIAHPQYSNLVEAYMDCQRGGAPSDVVPRLSVA---RQEFEARQRSSGTSRE-TSKD 189
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---------VSP 287
ELDQFM Y +L ++E+L + ++ EA+ IE L L SP
Sbjct: 190 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLGNNNNAPPLRIFSP 245
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
E + +++Q +S G E P+ + P +R ELK+ L
Sbjct: 246 SEDKCEGIGSSEDEQENSG-----GETEVPE------IDPRAEDR--------ELKNHLL 286
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+ S L
Sbjct: 287 RKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSESEKVAL 338
>gi|285804235|gb|ADC35598.1| class I KNOX homeobox transcription factor KNOPE6 [Prunus persica]
gi|289655984|gb|ADD14040.1| class 1 KNOTTED-like transcription factor KNOPE6 [Prunus persica]
Length = 334
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 100/219 (45%), Gaps = 28/219 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HP + L+ A++ C ++ P++ ++ S H +S S +GA D
Sbjct: 75 KTQIANHPRFPDLVDAYLECQKVGAPLEMKSLLEEIGRVSHHPMSTCSEIGA-------D 127
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGEGTGATM 295
ELD+FM Y +L +KE+L + EA I+ L+ L G P
Sbjct: 128 PELDEFMESYCEVLRGYKEELSKPFD----EATNFLTNIQSQLRKLCKGTFP-------- 175
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVR--QELKHELKQGYKEK 353
+ D N +G + G + ES+ + R +ELK L Y
Sbjct: 176 ------KTSWDCNSDEGVGSSEEEFSCGEVEAAESQETAAARAGGDRELKDMLLHKYSGY 229
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ ++R+E L+KR+ GKLP D + L WW +H +WPYPT
Sbjct: 230 LTNLRKEFLKKRKKGKLPKDARTALLDWWTTHYRWPYPT 268
>gi|239616354|gb|ACR83812.1| brevipedicellus [Brassica napus]
Length = 358
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 109/223 (48%), Gaps = 29/223 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I P + + +I A +Q ++ A ++ D
Sbjct: 94 KAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKI---TAATQEFEARQQRPTASVTALSRD 150
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG-----VSPGEGT 291
ELDQFM Y +L ++E+L + + AME + IE + L ++ +G
Sbjct: 151 PELDQFMEAYCDMLVKYREELTRPIE-EAMEYIR---RIESQISMLCQGPIHILNNPDGK 206
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
M DE+Q D N G E P+ + P +R ELK+ L + Y
Sbjct: 207 SEGMESSDEEQ---DNNNSGGEAELPE------IDPRAEDR--------ELKNHLLKKYS 249
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 250 GYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 292
>gi|26023939|gb|AAN77691.1|AF483278_1 KNOTTED1-like homeodomain protein 3 [Picea abies]
Length = 433
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 108/226 (47%), Gaps = 24/226 (10%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 286
G D ELDQFM Y +L + E+L + + EA+ +IE SL
Sbjct: 224 GM-------DPELDQFMEAYCEILTKYHEELAKPFK----EAMTFLMKIEAQFNSL---- 268
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
G+GT +S E+ ++ GS E + G E + +E +ELK L
Sbjct: 269 -GKGT-IRISPPAENDKKTEGG---GSSEEVEDGSGGETDFQEVDHHAVED--RELKDHL 321
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E ++K++ GKLP D L WW H KW YP+
Sbjct: 322 LRRYSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWSLHDKWSYPS 367
>gi|162464096|ref|NP_001105085.1| knotted related homeobox5 [Zea mays]
gi|30348865|gb|AAP31410.1|AF457119_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
gi|194708132|gb|ACF88150.1| unknown [Zea mays]
gi|413942049|gb|AFW74698.1| putative knotted-like transcription factor family protein [Zea
mays]
Length = 298
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P ++ + ++ + + +A AG +V D
Sbjct: 47 KAQIAGHPRYPSLLSAYIDCRKVGAP-SEVATLLEEIGRE-----RCAAASAGGEVVGMD 100
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y LL +KE+L + EA + L SL G + S
Sbjct: 101 PELDEFMETYCRLLERYKEELSRPFD----EAASFLSSVRTQLSSLCGGAASLSDEMVES 156
Query: 297 DDDED-QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+DE D+DA G E L +R ELK L + Y +
Sbjct: 157 SEDEPCSGDTDATTDPGQ---------------EHSSRLADR---ELKEMLLKKYSGCLS 198
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 199 RLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 235
>gi|340764130|gb|AEK69289.1| HIRZINA-like protein [Linaria vulgaris]
Length = 367
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 105/230 (45%), Gaps = 38/230 (16%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
N + KA+I+SHP Y +LL+A+V C +I P + + R++ A + S G
Sbjct: 101 NADDCSLKAKIMSHPHYHRLLAAYVNCQKIGAPDEVVERLEEAAAMCR------SHGLQG 154
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP-- 287
V +D LDQFM Y +L ++++L + ++ EA++ IE +++ P
Sbjct: 155 SICVGEDPSLDQFMEAYSEMLTKYEQELSKPLK----EAMLFFSRIESQFKAIALSHPSP 210
Query: 288 ---GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
G + E+++D + ++ D E ELK
Sbjct: 211 AATARGEALYRNGSSEEEIDVNNSMIDPQAED-----------------------VELKG 247
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+L + Y + +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 248 QLFRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 297
>gi|85543294|gb|ABC71527.1| KNOTTED1 homeodomain protein [Cenchrus americanus]
Length = 321
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 106/217 (48%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTD 235
KA+I+ HP Y LL+A++ C ++ P P + A+L A +Q + ++ G G T+
Sbjct: 101 KAKIIFHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATE 156
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
ELDQFM Y +L F+E+ + ++ AME + +E L SL+ +
Sbjct: 157 P-ELDQFMEAYHEMLVKFREEPTRPLQ-EAMEFMR---RVESQLNSLSISGRSLRNILSS 211
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 212 GSSEEDQEGSG-----GETEIPEIDAHG--------------VDQELKHHLLRKYSGYLS 252
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP + L WW++H KWPYP+
Sbjct: 253 SLKQELSKKKKKGKLPKEARQQLLGWWEAHYKWPYPS 289
>gi|297741767|emb|CBI32996.3| unnamed protein product [Vitis vinifera]
Length = 249
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 103/216 (47%), Gaps = 35/216 (16%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LL+A+ C ++ P P + A+L ++ S+ + + G + +D LD
Sbjct: 1 MAHPHYHRLLAAYANCQKVGAP----PEVVARLEEA--CASEAAMVRTGTSCIGEDPALD 54
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGATMSDD 298
QFM Y +L ++++L + + EA++ +E ++LT S G G +
Sbjct: 55 QFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALTVSSSDSAGGEGLDRNGS 110
Query: 299 DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIR 358
E++VD + N D P +R ELK +L + Y + ++
Sbjct: 111 SEEEVDVNNNFID---------------PQAEDR--------ELKGQLLRKYSGYLSSLK 147
Query: 359 EEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 148 QEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 183
>gi|195638046|gb|ACG38491.1| homeobox protein rough sheath 1 [Zea mays]
Length = 363
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 112/239 (46%), Gaps = 40/239 (16%)
Query: 157 EGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS 216
+G + ADG + KA I+SHP Y LL+A++ C ++ P D R+ A A +
Sbjct: 86 QGEMSSPAADGDAD----AIKARIMSHPQYSALLAAYLNCQKVGAPPDVSDRLSAMAAAN 141
Query: 217 QHVVSKYSALGAGQGLVT---DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACW 273
+ ++ + +G T DD ELDQFM Y +L F E++ + ++ EA
Sbjct: 142 --LDAQPGPISRRRGPTTTRADDPELDQFMEAYCNMLVKFHEEMARPIQ----EATEFFN 195
Query: 274 EIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERS 333
+E+ L G+T+SD + + S + D S P E +
Sbjct: 196 SMERQL------------GSTISDSNCEVAGSSEDEQDAS------------CPEEIDPC 231
Query: 334 LMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ ELKH+L + Y + +R+E ++++ GKLP + L WW+ H KWPYP+
Sbjct: 232 AEDK---ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>gi|25386225|pir||A96729 homeotic protein (ATK1), 26548-32058 [imported] - Arabidopsis
thaliana
gi|12325041|gb|AAG52468.1|AC010796_7 homeotic protein (ATK1); 26548-32058 [Arabidopsis thaliana]
Length = 311
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 33/227 (14%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHV----VSKYSA 225
N+ + K++I SHPLY +LL ++ C ++ P+ ++ I ++ + HV V+ S
Sbjct: 63 NFSLSVIKSKIASHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQRENHVYKRDVAPLSC 121
Query: 226 LGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV 285
GA D ELD+FM Y +L +K L + EA +IE LQ+L
Sbjct: 122 FGA-------DPELDEFMETYCDILVKYKTDLARPFD----EATTFINKIEMQLQNLCT- 169
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
G + +S DD V SD L + D +S++ +R +LK +
Sbjct: 170 --GPASATALSADD-GAVSSDEELREDDDIAAD----------DSQQRSNDR---DLKDQ 213
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + + I ++ E +K++ GKLP + L WW H+KWPYPT
Sbjct: 214 LLRKFGSHISSLKLEFSKKKKKGKLPREARQALLDWWNVHNKWPYPT 260
>gi|295149268|gb|ADF81047.1| KNOTTED-like homebox protein 2 [Cocos nucifera]
Length = 317
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 105/217 (48%), Gaps = 23/217 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y L+SA++ C ++ P P + + L + +Y++ G G + D
Sbjct: 58 KAQIASHPRYPSLVSAYIECRKVGAP----PEMASLLEEIGR--RRYTSAG---GEIGAD 108
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGEGTGATM 295
ELD+FM Y +L +KE+L + EA IE L +L G + T
Sbjct: 109 PELDEFMESYCRVLQRYKEELSKPFD----EAASFLNSIEVQLSNLCKGCTTSSSTTTAT 164
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+ D+V GS E + + G + +ES+ S ELK L + Y +
Sbjct: 165 GNSPSDEVV-------GSSE--EELSCGDVDASESQESGSRLADHELKEMLLKKYSGYLS 215
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++R+E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 216 NLRKEFLKKRKKGKLPKDARLTLLDWWHAHYRWPYPT 252
>gi|242089383|ref|XP_002440524.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
gi|241945809|gb|EES18954.1| hypothetical protein SORBIDRAFT_09g002520 [Sorghum bicolor]
Length = 303
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 98/216 (45%), Gaps = 29/216 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + + + A + G V D
Sbjct: 53 KAQIAGHPRYPSLLSAYIECRKVGAP----PEVATLL---EEIGRERCAAASAGGEVGLD 105
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA + L SL G A++S
Sbjct: 106 PELDEFMEAYCRVLERYKEELSRPFD----EAASFLSSVRTQLSSLCG------GAASLS 155
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D E S+ G E D + E L +R ELK L + Y +
Sbjct: 156 D--EMVGSSEDEPCSGDTEATD-------LGQEHSSRLADR---ELKEMLLKKYSGCLSR 203
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 204 LRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 239
>gi|239819334|gb|ACS28249.1| BREVIPEDICELLUS [Brassica rapa]
Length = 383
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 108/223 (48%), Gaps = 29/223 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I P + + +I A Q ++ A ++ D
Sbjct: 119 KAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKI---TAARQEFEARQQRPTASVTALSRD 175
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG-----VSPGEGT 291
ELDQFM Y +L ++E+L + + AME + IE + L ++ +G
Sbjct: 176 PELDQFMEAYCDMLVKYREELTRPIE-EAMEYIR---RIESQISMLCQGPIHILNNPDGK 231
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
M DE+Q D N G E P+ + P +R ELK+ L + Y
Sbjct: 232 SEGMESSDEEQ---DNNNSGGEAELPE------IDPRAEDR--------ELKNHLLKKYS 274
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 275 GYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 317
>gi|356577702|ref|XP_003556963.1| PREDICTED: homeobox protein knotted-1-like 2-like, partial [Glycine
max]
Length = 323
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 111/223 (49%), Gaps = 34/223 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I + + R+ A A+ + + S++G+ + + D
Sbjct: 65 KAKIIAHPQYSNLLEAYMDCQKIGATPEVVARMVA--AKQEFEARQRSSVGSRE--TSKD 120
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG-----VSPGEGT 291
ELDQFM Y +L ++E+L + ++ EA+ IE L L +S +
Sbjct: 121 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLCNGPVRILSDDKCE 176
Query: 292 GATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
GA S++D+D + L P I +E +ELK+ L + Y
Sbjct: 177 GAGSSEEDQDNSGGETEL--------------PEIDPRAED-------RELKNHLLRKYS 215
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E+ +K++ GKLP D L +WW+ H KWPYP+ S
Sbjct: 216 GYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPSES 258
>gi|132424653|gb|ABO33479.1| class I KNOX homeobox transcription factor [Medicago truncatula]
Length = 288
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 23/218 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I P P + A+L S+ + D
Sbjct: 29 KAKIIAHPQYSSLLQAYMDCQKIGAP----PEVVARLVASRQEFEARQRSSVNSRETSKD 84
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ IE L +L G
Sbjct: 85 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNTLCN-----GPLRIFP 135
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD + V S D G +T + P +R ELK+ L + Y +
Sbjct: 136 DDKNEGVGSSEE--DQENSGGETDQLPEIDPRAEDR--------ELKNHLLKKYSGYLSS 185
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 186 LKQELSKKKKKGKLPKEARQKLLNWWELHYKWPYPSES 223
>gi|187606722|emb|CAQ51275.1| putative knotted1-like protein [Helianthus annuus]
Length = 346
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 107/234 (45%), Gaps = 39/234 (16%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS-----------QHVVS 221
N+ KA+I+SHP Y +LLSA++ C +I P + + R++ S +
Sbjct: 73 NSNVKAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRSSLMAAMSSRSGSDGAGT 132
Query: 222 KYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS 281
G +V D LDQFM Y +L ++++L + + EA++ +E ++
Sbjct: 133 SGGGAGMSSTIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRMESQFKA 188
Query: 282 LTGVSPGEGTGATMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERV 338
+T + G G D + E+++D D M G + P +R
Sbjct: 189 ITFSNSDSGCGEGGMDRNGSSEEELDVD-------------MNNGMVDPQAEDR------ 229
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 230 --ELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 281
>gi|160420032|dbj|BAF93479.1| class-I knotted1-like homeobox protein IBKN2 [Ipomoea batatas]
Length = 382
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 37/238 (15%)
Query: 162 ESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS 221
ES D ++ +A KA+I++HP Y LL A+V C ++ P + R+ A Q +
Sbjct: 108 ESAGDNSLSEGDA-MKAKIIAHPQYSNLLEAYVDCQKVGAPPEMAARLSAA---RQELEG 163
Query: 222 KYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS 281
K A G + D ELDQFM Y +L ++++L + + EA+ IE L
Sbjct: 164 KQRASFIGSRDSSKDPELDQFMEAYYDMLMKYRDELTRPFQ----EAMEFMRRIESQLNM 219
Query: 282 LTGV------SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLM 335
L+ S + G S++D+D + L R +
Sbjct: 220 LSDGPVRIFNSDDKCEGVGSSEEDQDNSGGETEL----------------------REID 257
Query: 336 ERVR-QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
RV+ +ELK+ L + Y + +++E+ +K++ GKLP D L SWW+ H KWPYP+
Sbjct: 258 PRVQDRELKNHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPS 315
>gi|187606720|emb|CAQ51274.1| putative knotted1-like protein [Helianthus tuberosus]
Length = 361
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 38/227 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRID--------AQLAQSQHVVSKYSALGA 228
KA+I+SHP Y +LLSA++ C +I P + + R++ A ++ G
Sbjct: 95 KAKIMSHPHYPRLLSAYLNCQKIGAPPEVVERLEEACRASVVAAMSSRSGGAGTSDGGGG 154
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL---TGV 285
++ D LDQFM Y +L ++++L + + EA++ IE +++ T
Sbjct: 155 MNMIIGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISISTSD 210
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
S G G + E++VD + NL D P +R ELK +
Sbjct: 211 SAGGEGGMDKNGSSEEEVDVNNNLID---------------PQAEDR--------ELKGQ 247
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 248 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 294
>gi|55669503|gb|AAV54619.1| homeobox transcription factor KN2 [Pinus taeda]
Length = 429
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 109/217 (50%), Gaps = 23/217 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++IL+HP Y LL A++ C +I P + R+DA L+ S+L G D
Sbjct: 169 KSKILAHPQYPNLLGAYIDCQKIGAPPEVASRLDA-LSHEYENQQHRSSLSIGM-----D 222
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT-GATM 295
ELDQFM Y +L + E+L + + EA+ +IE L SL G+GT +
Sbjct: 223 PELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLNSL-----GKGTIRISP 273
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
S +++++ + A+ S E D G G E + +E +ELK L + Y +
Sbjct: 274 SAENDEKTEGGAS----SEEVEDGSG-GETDFQEVDHHAVED--RELKDHLLRKYSGYLS 326
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 327 SLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPS 363
>gi|356497567|ref|XP_003517631.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 309
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 100/224 (44%), Gaps = 43/224 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD-----QLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA+I SHP Y +LL A++ C ++ P + + R + L +S VVS + GA
Sbjct: 69 KAKIASHPQYSRLLQAYIDCQKVGAPPEIARLLEEIRRENDLCKSD-VVSSSTCFGA--- 124
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TG--VSPG 288
D ELD+FM Y +L +K L + EA +IE L L TG VS
Sbjct: 125 ----DPELDEFMETYCDMLVKYKSDLARPFE----EATTFLNKIEMQLSHLCTGASVSNV 176
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
G SD+D D DA DG L+G D +ELK L +
Sbjct: 177 SDDGGVSSDEDLSTGDGDAQ--DGQLKGED---------------------RELKDRLLR 213
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 214 KFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPT 257
>gi|26023937|gb|AAN77690.1|AF483277_1 KNOTTED1-like homeodomain protein 2, partial [Picea abies]
Length = 383
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 140/314 (44%), Gaps = 48/314 (15%)
Query: 87 NNNTASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANS 144
S S + P Q+ + R R +++ VTP S+ + A + + +
Sbjct: 46 KTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFVVTPLVTSLPPQQQEARMVTSLA 105
Query: 145 ENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVD 204
+M+++ + E AD + KA+I++H Y +L++A++ C ++ P D
Sbjct: 106 VDMDSSCSCKPIE-------ADAM--------KAKIIAHVHYPRLVAAYIDCQKVGAPPD 150
Query: 205 QLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVH 264
+ +D +L+Q H + + G D ELDQFM Y + ++E+L + +
Sbjct: 151 VVSELD-ELSQKCHAQQCVATISIGA-----DPELDQFMEAYCEMFIKYQEELTKPFK-- 202
Query: 265 AMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMG--- 321
EA+ +IE L +LT +GT T S D D+ A S E D G
Sbjct: 203 --EAMAFLKKIENQLGALT-----KGTIRTSSLDQGDERGDGA----ASSEEEDGSGGEV 251
Query: 322 -FGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKS 380
F + P +R ELK +L + Y + +++E L+K++ GKLP + L
Sbjct: 252 EFHEVDPHAEDR--------ELKDQLLRKYSGYLSSLKQEFLKKKKKGKLPKEARQKLLD 303
Query: 381 WWQSHSKWPYPTVS 394
WW + KWPYP+ S
Sbjct: 304 WWTRNYKWPYPSES 317
>gi|270610244|gb|ACZ92179.1| shootmeristemless [Cichorium intybus x Cichorium endivia]
Length = 361
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 38/227 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRID------AQLAQSQHVVSKYSALGAGQ 230
KA+I+SHP Y +LLSA++ C ++ P + + R++ A S S S G
Sbjct: 97 KAKIMSHPHYPRLLSAYLNCQKVGAPPEVVERLEEACRASVMAAMSGRSGSGGSGGGMST 156
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
+V D LDQFM Y +L ++++L + + EA++ IE ++++ + G
Sbjct: 157 SIVGQDPALDQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAISFSASDSG 212
Query: 291 TGATMSD----DDED-QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
G D +ED VD + N+ D P ER ELK +
Sbjct: 213 CGDGGMDRNGSSEEDLDVDVNNNMVD---------------PQAEER--------ELKGQ 249
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 250 LLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 296
>gi|300676313|gb|ADK26526.1| KNOTTED1-like protein [Petunia x hybrida]
Length = 357
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 106/223 (47%), Gaps = 22/223 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+IL+HP LL A++ C ++ P + + R+ + L Q + + S G V D
Sbjct: 96 KAKILAHPQCSSLLDAYMDCQKVGAPPEVMARL-STLRQEFEMRQRASLTGKD---VAKD 151
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + ++ EA+ IE L L G G +
Sbjct: 152 PELDQFMEAYYDMLVKYREELTRPLQ----EAMDFMRTIETQLNML-------GNGPVRA 200
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+ ED + S E D G +P R+ +ELK+ L + Y +
Sbjct: 201 FNSED---NKCEGVGSSEEDQDNSGGETELPEIDPRA----EDRELKNHLLKKYSGYLSS 253
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 254 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 296
>gi|297838847|ref|XP_002887305.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
lyrata]
gi|297333146|gb|EFH63564.1| hypothetical protein ARALYDRAFT_476175 [Arabidopsis lyrata subsp.
lyrata]
Length = 310
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 105/223 (47%), Gaps = 26/223 (11%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
N+ + K++I HPLY +LL ++ C ++ P+ ++ I ++ Q HV + A +
Sbjct: 62 NFSLSVIKSKIACHPLYPRLLQTYIDCQKVGAPM-EIACILEEIQQENHVYKRDVAPLSC 120
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
G DD ELD+FM Y +L +K L + EA +IE LQ+L G
Sbjct: 121 FG---DDPELDEFMETYCDILVKYKTDLARPFD----EAATFINKIEMQLQNLCT---GP 170
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
+ +SDD + SD L + + +S++ +R +LK +L +
Sbjct: 171 ASATALSDDG--ALSSDEELREDD----------HVTAQDSQQRSNDR---DLKDQLLRK 215
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 216 FGSHISSLKLEFSKKKKKGKLPREARQALFDWWNVHYKWPYPT 258
>gi|380746847|gb|AFE48354.1| KNOTTED-like 1-3a homeodomain protein, partial [Cuscuta pentagona]
Length = 272
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 104/225 (46%), Gaps = 39/225 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL A++ C ++ P D R+ A Q + + LG G D
Sbjct: 10 KAKIISHPHYSNLLEAYMECQKVGAPPDVAARLSAA-RQDFESRQRATLLGGGH---EKD 65
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV---------SP 287
ELD+FM Y +L ++E+L + ++ EA+ IE L L+
Sbjct: 66 PELDRFMEAYYDMLVKYREELTRPLQ----EAMEFMRRIESQLNMLSNAPVRVFNHSDEK 121
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G++ D D N G E P+ + P +R ELK+ L
Sbjct: 122 CEGVGSSEEDQD--------NNSPGETELPE------IDPRAEDR--------ELKNHLL 159
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 160 RKYSGYLSSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 204
>gi|345649239|gb|AEO14150.1| KNAT2/6 protein [Eschscholzia californica subsp. californica]
Length = 355
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 102/219 (46%), Gaps = 26/219 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD---QLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
KA+I SHP Y LL A++ C ++ P++ L I + S+ V + LG
Sbjct: 108 KAKIASHPRYPILLDAYIDCQKVGAPMEIACLLDEIRQENDTSKRTVVSTTCLG------ 161
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
DD ELD FM Y +L +K L + EA +I+ L +L +
Sbjct: 162 -DDPELDNFMETYCDILVRYKSDLSRPFN----EATTFLNKIQMQLSNLCNNKSSSNRIS 216
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+ S + D++ GS E D + G + E + L +R E+K +L + Y
Sbjct: 217 SASAANSDEIV-------GSSE--DDLSGGEIEVQEVQPRLEDR---EMKDKLLRKYSGY 264
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I +++E +K++ GKLP D +L WW H+KWPYPT
Sbjct: 265 ISSLKQEFSKKKKKGKLPKDARQILFDWWNVHNKWPYPT 303
>gi|297739199|emb|CBI28850.3| unnamed protein product [Vitis vinifera]
Length = 248
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 105/218 (48%), Gaps = 39/218 (17%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTDDKEL 239
++HP Y +LL+A+V C ++ P + + R++ A + A+G + V +D L
Sbjct: 1 MAHPHYPRLLAAYVNCQKVGAPPEVVARLEEACASEE-------AMGRSATSCVGEDPAL 53
Query: 240 DQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE---GTGATMS 296
DQFM Y +L ++++L + + EA++ IE ++LT V+P + G+ A
Sbjct: 54 DQFMEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQFKALT-VAPSDSVCGSYAGRV 108
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
E++VD + D P +R ELK +L + Y +
Sbjct: 109 GSSEEEVDGNDTCID---------------PQAEDR--------ELKGQLLRKYSGYLGS 145
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E L+K++ GKLP + L WW H KWPYP+ S
Sbjct: 146 LKQEFLKKKKKGKLPKEARQQLLDWWSRHYKWPYPSES 183
>gi|383212083|dbj|BAM08928.1| class I knotted1-like homeobox protein [Asparagus asparagoides]
Length = 341
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 165 ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS 224
A +V+ + KA+I+SHP Y LL A++ C ++ P + R+ +A+ + +
Sbjct: 65 ARRLVSTDDETIKAKIVSHPQYSALLGAYMDCQKVGAPPELAARLSV-IAREIEAQQQAA 123
Query: 225 ALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
A + + D ELDQFM Y +L ++E+L + ++ EA+ +E L S+T
Sbjct: 124 AASCRRDASSTDPELDQFMEAYCNMLVKYREELTRPLQ----EAMDFLRRVESQLNSIT- 178
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
GAT S D+ + +G P I +E +ELKH
Sbjct: 179 ------NGATASIFSTDEKCEGVGSSEEDQDGSGGEAEHPEIDPRAED-------KELKH 225
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +R E+ +K++ GKLP + L +WW+ H KWPYP+
Sbjct: 226 HLLKKYSGYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 273
>gi|239819336|gb|ACS28250.1| BREVIPEDICELLUS [Brassica oleracea]
Length = 380
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 108/226 (47%), Gaps = 35/226 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I P + + +I A Q ++ A ++ D
Sbjct: 116 KAKIIAHPHYSTLLHAYLDCQKIGAPPEVVDKI---TAARQEFEARQQRPTASVTALSRD 172
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV--------MACWEIEQSLQSLTGVSPG 288
ELDQFM Y +L ++E+L + + AME + M C Q + G
Sbjct: 173 PELDQFMEAYCDMLVKYREELTRPIE-EAMEYIRRIESQISMLC----QGPIHILNNPDG 227
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
+ G SD+++D +S G E P+ + P +R ELK+ L +
Sbjct: 228 KSEGIESSDEEQDNNNSG-----GEAELPE------IDPRAEDR--------ELKNHLLK 268
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 269 KYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 314
>gi|380746851|gb|AFE48356.1| liguleless-like homeodomain protein [Cuscuta pentagona]
Length = 350
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 102/228 (44%), Gaps = 38/228 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I +HPLY L+SA++ C ++A P P+I L + + A + D
Sbjct: 90 KAQIANHPLYPNLVSAYIQCTKVAAP----PQISTLLEEISQHPPAAATTTATADEIAGD 145
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV----------- 285
ELDQFM Y + +KE+L + EA IE L SL
Sbjct: 146 PELDQFMESYCEAMYKYKEELSKPFD----EAKAFLSSIESQLSSLCKDSSSQTSFNSSF 201
Query: 286 -SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
S EG G + ++E++ S + G +G D ER ++K
Sbjct: 202 HSCDEGGGGGDTSEEEEEYASHGEVEVGD-DGDD-----------------ERQWAQIKE 243
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + ++R++ L+KR+ GKLP D VL WW SH +WPYPT
Sbjct: 244 MLMRKYSGYLSNLRKDFLKKRKKGKLPKDARLVLLQWWDSHYRWPYPT 291
>gi|57116572|gb|AAW33774.1| STM1 protein [Streptocarpus rexii]
Length = 358
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 108/224 (48%), Gaps = 39/224 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++I++HP Y +LL+A+V C +I P + + +++ A + + + + V +D
Sbjct: 103 KSKIMAHPHYPRLLAAYVNCQKIGAPPEVVAKLEEACASTITIGGRNE-----RSCVGED 157
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT-- 294
LDQFM Y +L ++++L + + EA++ IE ++LT +S +GA
Sbjct: 158 PALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIECQFKALT-LSHSSDSGACGE 212
Query: 295 ----MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+ E++ D + + D P +R ELK +L + Y
Sbjct: 213 AVLERNGSSEEEFDVNNSFID---------------PQAEDR--------ELKGQLLRRY 249
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ ++++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 250 SGYLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 293
>gi|224133590|ref|XP_002321612.1| predicted protein [Populus trichocarpa]
gi|222868608|gb|EEF05739.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 98/222 (44%), Gaps = 45/222 (20%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATP------VDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
+A+I SHPLY +LL A++ C ++ P +D++ + +S + V+ S LGA
Sbjct: 41 RAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLDEIREENDVSKRSDNTVA--SCLGA-- 96
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELD+FM Y +L +K L + EA +IE +L G
Sbjct: 97 -----DPELDEFMETYCDILMKYKADLSRPFD----EATAFLNDIEAQFNTLCN-----G 142
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
T+ DED DA + D + D +ELK +L Y
Sbjct: 143 ASRTVGSSDEDASGGDAEVQDCTRANED---------------------RELKDKLLCKY 181
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I ++ E +K++ GKLP + VL +WW H KWPYPT
Sbjct: 182 SGYISTLKHEFSKKKKKGKLPKEAREVLLNWWTVHYKWPYPT 223
>gi|255542896|ref|XP_002512511.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223548472|gb|EEF49963.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 327
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I HP Y L+SA++ C ++ P P + + L + YS G G + D
Sbjct: 69 KTQIAHHPRYPDLVSAYIECQKVGAP----PEMTSLLEEIGR--ENYSIKGC-SGEMGAD 121
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA +IE L +L G T
Sbjct: 122 PELDEFMESYCEVLHRYKEELSKPFD----EATTFFSDIESQLSNLC---KGTLTKTFHY 174
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER-VRQELKHELKQGYKEKIV 355
DE S+ + G +E +ES S R V +LK L + Y +
Sbjct: 175 GSDEAVGTSEEEISCGEIEA-----------SESRESCGSRPVDPDLKGMLLRKYSGYLS 223
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++R+E L+KR+ GKLP D +L WW +H +WPYPT
Sbjct: 224 NLRKEFLKKRKKGKLPKDARMILLDWWNNHYRWPYPT 260
>gi|42570557|ref|NP_850951.2| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
gi|75146711|sp|Q84JS6.1|KNAT6_ARATH RecName: Full=Homeobox protein knotted-1-like 6; AltName:
Full=Protein KNAT6
gi|27754596|gb|AAO22744.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
gi|28393913|gb|AAO42364.1| putative homeodomain transcription factor KNAT6 [Arabidopsis
thaliana]
gi|332192260|gb|AEE30381.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
Length = 327
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 28/217 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y +LL A++ C ++ P P I L + Q Y D
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKVGAP----PEIACLLEEIQRESDVYKQEVVPSSCFGAD 141
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +K L + EA +IE L++L TGV G
Sbjct: 142 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSE-- 195
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
DG + + + G E R E ++LK L + + +I
Sbjct: 196 ---------------DGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGSRIS 238
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 275
>gi|9295701|gb|AAF87007.1|AC005292_16 F26F24.25 [Arabidopsis thaliana]
gi|15991300|dbj|BAB69678.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
Length = 324
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 28/217 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y +LL A++ C ++ P P I L + Q Y D
Sbjct: 83 KAKIACHPSYPRLLQAYIDCQKVGAP----PEIACLLEEIQRESDVYKQEVVPSSCFGAD 138
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGATM 295
ELD+FM Y +L +K L + EA +IE L++L TGV G
Sbjct: 139 PELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSE-- 192
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
DG + + + G E R E ++LK L + + +I
Sbjct: 193 ---------------DGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGSRIS 235
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 236 TLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 272
>gi|33333546|gb|AAQ11889.1| knotted 2 [Nicotiana tabacum]
Length = 341
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 107/223 (47%), Gaps = 23/223 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP LL A++ C ++ P + + R+ A + Q V + S+ V+ D
Sbjct: 81 KAKIIAHPQCSNLLDAYMDCQKVGAPPEVVARLSA-VRQEFEVRQRDSSTDRD---VSKD 136
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + EA+ +IE L L G G
Sbjct: 137 PELDQFMEAYYDMLVKYREELTRPLH----EAMDFMRKIETQLNML-------GNGPVRI 185
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+ ED+ + S E D G IP R+ +ELK+ L + Y +
Sbjct: 186 FNSEDKCEG----VGSSEEEQDNSGGETEIPEIDPRA----EDRELKNHLLRKYSGYLSS 237
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 238 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 280
>gi|224118100|ref|XP_002331558.1| predicted protein [Populus trichocarpa]
gi|222873782|gb|EEF10913.1| predicted protein [Populus trichocarpa]
Length = 369
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 107/221 (48%), Gaps = 37/221 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGLVTD 235
KA+I++HP Y +LL+A+ C ++ P + + R++ A + +++G A + +
Sbjct: 118 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASA-------ASMGPANTDGIGE 170
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGA 293
D LDQFM Y +L ++++L + ++ EA++ +E ++LT SP G G
Sbjct: 171 DPALDQFMEAYCEMLTKYEQELSKPLK----EAMVFLQRVECQFRALTLSSPNSAWGEGN 226
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+ E+++D + D E QELK +L + Y
Sbjct: 227 DRNASSEEELDVNNKFIDPQAE-----------------------DQELKGQLLRKYSGY 263
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 264 LGSLKKEFMKKRKKGKLPKEARQQLLDWWSRHHKWPYPSES 304
>gi|3928843|gb|AAC84001.1| homeobox protein [Picea abies]
Length = 434
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG----VSPGE 289
D ELDQFM Y +L + E+L + + EA+ +IE L SL+ +SP
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLNSLSKGTIRISP-- 278
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
+ +D+ + S + DGS D E + +E +ELK L +
Sbjct: 279 ---SAENDEKTEGGASSEEVEDGSGGETDFQ--------EVDHHAVED--RELKDHLLRK 325
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 326 YSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPS 368
>gi|145346212|ref|XP_001417587.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577814|gb|ABO95880.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 244
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 99/220 (45%), Gaps = 24/220 (10%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD--DK 237
+ +HP+Y +L+ A+ C +I D L +D + + V + + G D +
Sbjct: 12 VRAHPMYPRLVEAYYECRQIGAEGDVLEALDRERDAMLYSVQVMNEDASSSGGAHDVPQR 71
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAM--EAVMACWEIEQSLQSLTG--VSPGEGTGA 293
+LD+FM L S+ ++L HA+ +A C E+E + + V + G
Sbjct: 72 DLDRFMRECTHELESYVKEL------HALYEDAKSCCRELETRARKVRSDVVKSADIRG- 124
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMG-FGPLIPTESERSLMERVRQELKHELKQGYKE 352
+ +S + E G F ++ +R E + L+ LK+ Y
Sbjct: 125 -------EAAESKRRAPATAAEHAAASGDFDQILSNSQQRRDHE---ERLREALKRKYAS 174
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I+ ++ E +RKR+ GKLP +T VLK+WW + WPYPT
Sbjct: 175 SIMTLKSEFMRKRKKGKLPDQSTEVLKNWWSENIVWPYPT 214
>gi|4099828|gb|AAD00692.1| homeobox transcription factor SKN2 [Picea mariana]
Length = 442
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 182 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 234
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG----VSPGE 289
D ELDQFM Y +L + E+L + + EA+ +IE L SL+ +SP
Sbjct: 235 --DPELDQFMEAYCEMLTKYHEELTKPFK----EAMSFLKKIEAQLNSLSKGTIRISP-- 286
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
+ +D+ + S + DGS D E + +E +ELK L +
Sbjct: 287 ---SAENDEKTEGGASSEEVEDGSGGETDFQ--------EVDHHAVED--RELKDHLLRK 333
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++K++ GKLP D L WW H KWPYP+
Sbjct: 334 YSGYLSSLKQEFMKKKKKGKLPKDARQKLLDWWTVHYKWPYPS 376
>gi|242037977|ref|XP_002466383.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
gi|241920237|gb|EER93381.1| hypothetical protein SORBIDRAFT_01g006790 [Sorghum bicolor]
Length = 349
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 46/223 (20%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG----- 231
KA+I+SHP Y LL+A++ C ++ P D R+ A A+ LGA G
Sbjct: 92 KAKIMSHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAK----------LGAQPGPSRWR 141
Query: 232 --LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
D ELDQFM Y +L F+E++ + ++ EA +E+ LQ L +S
Sbjct: 142 EPTTRPDPELDQFMEAYCNMLVKFQEEMARPIQ----EATEFFKSVERQLQ-LGSISDSS 196
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
S +DE ++ D E +ELKH+L +
Sbjct: 197 NCEVAGSSEDEQDASCPEDI-DPCAED-----------------------KELKHQLLRK 232
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +R+E ++++ GKLP + L WW+ H KWPYP+
Sbjct: 233 YGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 275
>gi|326910891|gb|AEA11233.1| knotted-like homebox protein [Elaeis guineensis]
Length = 318
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 106/216 (49%), Gaps = 20/216 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I +HP Y L++A++ C ++ P P + + L + +Y++ G G+ + D
Sbjct: 61 KAQIANHPRYPSLVAAYIECRKVGAP----PEMASLLEEIGR--ERYTSAGCGE--IGAD 112
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA IE L +L +G T S
Sbjct: 113 PELDEFMESYCRVLQRYKEELSKPFN----EAASFLNSIEMQLSNLC-----KGR-TTSS 162
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+S ++ GS E + + G + +E + S ELK L + Y + +
Sbjct: 163 STTGGTGNSPSDEMVGSSE--EELSCGDVDASECQESGSRLADHELKEMLLKKYSGYLSN 220
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R+E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 221 LRKEFLKKRKKGKLPKDARLTLLDWWHTHYRWPYPT 256
>gi|383212085|dbj|BAM08929.1| class I knotted1-like homeobox protein [Asparagus officinalis]
Length = 343
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/228 (28%), Positives = 108/228 (47%), Gaps = 19/228 (8%)
Query: 165 ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS 224
A +V+ + KA+I+SHP Y LL A++ C ++ P + R+ +A+ + +
Sbjct: 67 ARRLVSTDDETIKAKIVSHPQYSTLLGAYMDCQKVGAPPELAARLSV-IAREIEAQQQAA 125
Query: 225 ALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
A + + D ELDQFM Y +L ++E+L + ++ EA+ +E L S+T
Sbjct: 126 AASCRRDASSADPELDQFMEAYCNMLVKYREELTRPLQ----EAMDFLRRVESQLNSIT- 180
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
GAT S D+ + +G P I +E +ELKH
Sbjct: 181 ------NGATASIFSTDEKCEGVASSEEDQDGSGGEAEHPEIDPRAED-------KELKH 227
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +R E+ +K++ GKLP + L +WW+ H KWPYP+
Sbjct: 228 HLLKKYSGYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYKWPYPS 275
>gi|168831394|gb|ACA34978.1| KNOX1 [Streptocarpus rexii]
Length = 358
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 33/224 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAG-QGLVT 234
KA+I++HP Y LL A++ C R+ P P + A+L A Q ++ A GA + V+
Sbjct: 97 KAKIIAHPQYSNLLEAYLDCQRVGAP----PEVVARLTAVRQEFEARQRAGGAADRDHVS 152
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG----VSPGEG 290
D ELDQFM Y +L ++E+L + ++ EA+ IE L +T +S E
Sbjct: 153 KDPELDQFMEAYYDMLVKYREELSRPLQ----EAMEFMRRIESQLNMITNCPVRISNPEE 208
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+ +EDQ +S G E + P +R ELK+ L + Y
Sbjct: 209 KCEGIVSSEEDQENSA-----GETE------LAEIDPRAEDR--------ELKNHLLRKY 249
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E+ +K++ GKLP D L SWW+ H KWPYP+ S
Sbjct: 250 SGYLSSLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSES 293
>gi|308803302|ref|XP_003078964.1| knotted class 1 homeodomain protein liguleless3 (ISS) [Ostreococcus
tauri]
gi|116057417|emb|CAL51844.1| knotted class 1 homeodomain protein liguleless3 (ISS) [Ostreococcus
tauri]
Length = 345
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 101/231 (43%), Gaps = 28/231 (12%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQ---LPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
I +HP+Y +L+ A+ C +I D L R + S V+S+ + + L
Sbjct: 73 IRAHPMYARLVEAYYECRKIGAHGDAAVALEREKDAMLYSVQVMSEEAYESSAMALDVAS 132
Query: 237 KELDQFM---TH----YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
+LD+FM TH YV L S E ++ + A ++ S G +
Sbjct: 133 CDLDEFMRDCTHELETYVKELHSLYEDAKRCCKSLENRAHKVKTDVVHVDSSRRGEAAES 192
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
A ++D+ + V D F ++ +E +R E + L+ +LK+
Sbjct: 193 KRHAPATEDELEAVSDD---------------FDQILASEHQRRNHE---ERLRQDLKRK 234
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLLL 400
Y I ++ E +RKR+ GKLP +T +LK WW + WPYP+ +L+
Sbjct: 235 YASSITMLKTEFMRKRKKGKLPDTSTDILKKWWSDNIVWPYPSEDDKQVLI 285
>gi|222625535|gb|EEE59667.1| hypothetical protein OsJ_12069 [Oryza sativa Japonica Group]
Length = 353
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS---ALGAGQ 230
A KA+I+SHPLY LL A V C ++ P + + R+ + + V +YS L A Q
Sbjct: 69 AMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTD--VPQYSGDRCLPAQQ 126
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELDQFM Y +L + ++L + I+++ + G+
Sbjct: 127 PAA--DPELDQFMETYCYMLTRYGQELAR--------------PIQEAEEFFRGI----- 165
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
E+Q+DS A D S + D + G +P +S V + L Y
Sbjct: 166 ---------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKY 214
Query: 351 KEKIVDIREEILRKRR--AGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + EI K++ G LP D L WW H +WPYP+
Sbjct: 215 SGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 258
>gi|56236458|gb|AAV84585.1| knotted-like homeobox protein [Populus tomentosa]
Length = 368
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 108/225 (48%), Gaps = 41/225 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS-QHVVSKYSALGAGQGLVTD 235
KA+I++HP Y LL A++ C ++ P P + A+LA + Q S+ + + +
Sbjct: 109 KAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRD-NSK 163
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV--------MACWEIEQSLQSLTGVSP 287
D ELDQFM Y +L ++E+L + ++ AM+ + M C L+
Sbjct: 164 DPELDQFMEAYCDMLVKYREELTRPIQ-EAMDFMRRIETQLNMIC---HGPLRIFNSDDK 219
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G+ S+DD+D + L P I +E +ELK+ L
Sbjct: 220 SEGVGS--SEDDQDNSGGETEL--------------PEIDPRAED-------RELKNHLL 256
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 257 RKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|388517925|gb|AFK47024.1| unknown [Medicago truncatula]
Length = 316
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 97/226 (42%), Gaps = 44/226 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD-----QLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA+I SHP Y +LL A++ C ++ P + + R + + + VVS + GA
Sbjct: 73 KAKIASHPYYPRLLQAYIDCQKVGAPPEIASLLEEIRRENDMCKRDVVVS--TCFGA--- 127
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ELD+FM Y +L +K L + EA +IE L L +
Sbjct: 128 ----DPELDEFMESYCDMLVKYKSDLTRPFD----EATTFLNKIETQLSHLCTGGAAAAS 179
Query: 292 GATMSDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
T SDD DED D ++ DG +G D +ELK L
Sbjct: 180 LPTASDDGGASSDEDLSTGDGDVQDGQSKGED---------------------RELKDRL 218
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 219 LRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPT 264
>gi|429326570|gb|AFZ78625.1| knotted-like protein [Populus tomentosa]
Length = 368
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C ++ P P + A+LA ++ + D
Sbjct: 109 KAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRDNSKD 164
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV--------MACWEIEQSLQSLTGVSPG 288
ELDQFM Y +L ++E+L + ++ AM+ + M C L+
Sbjct: 165 PELDQFMEAYYDMLVKYREELTRPIQ-EAMDFMRRIETQLNMIC---HGPLRIFNSDDKS 220
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG G+ S+DD+D + L P I +E +ELK+ L +
Sbjct: 221 EGVGS--SEDDQDNSGGETEL--------------PEIDPRAED-------RELKNHLLR 257
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 258 KYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|357485791|ref|XP_003613183.1| Knotted-1 homeobox protein [Medicago truncatula]
gi|355514518|gb|AES96141.1| Knotted-1 homeobox protein [Medicago truncatula]
Length = 316
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 96/226 (42%), Gaps = 44/226 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD-----QLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA+I SHP Y +LL A++ C ++ P + + R + + + VVS + GA
Sbjct: 73 KAKIASHPYYPRLLQAYIDCQKVGAPPEIASLLEEIRRENDMCKRDVVVS--TCFGA--- 127
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ELD+FM Y +L +K L + EA +IE L L +
Sbjct: 128 ----DPELDEFMESYCDMLVKYKSDLTRPFD----EATTFLNKIETQLSHLCTGGAAAAS 179
Query: 292 GATMSDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
T SDD DED D ++ DG G D +ELK L
Sbjct: 180 LPTASDDGGASSDEDLSTGDGDVQDGQSRGED---------------------RELKDRL 218
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 219 LRKFGSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPT 264
>gi|7581979|emb|CAB88029.1| knotted1-like homeobox protein [Dendrobium grex Madame Thong-In]
Length = 286
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 98/216 (45%), Gaps = 24/216 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I SHP Y LL A++ C ++ P P I + L + + + L + ++ D
Sbjct: 42 KARIASHPRYPHLLEAYIDCQKVGAP----PDIASLLEEIRRENAGGERLASSSVILGSD 97
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L ++ L++ EA +E L L + G +S
Sbjct: 98 PELDEFMEMYCDVLVKYRRDLERPFD----EATAFLNTMEVQLSDLCKPTCRAALGPYVS 153
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D E SD L G E P+ S ++ ++LK +L + Y +
Sbjct: 154 D--EAVGSSDEELSGGEGEAPE--------------SHLKGEERDLKEKLLRKYSGYLSS 197
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E +K++ GKLP + +L WW +H KWPYPT
Sbjct: 198 LKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPT 233
>gi|75226461|sp|Q75LX9.1|KNOS5_ORYSJ RecName: Full=Putative homeobox protein knotted-1-like 5
gi|40538948|gb|AAR87205.1| putative KNOX class homeodomain protein [Oryza sativa Japonica
Group]
Length = 337
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 39/224 (17%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA---LGAGQ 230
A KA+I+SHPLY LL A V C ++ P + + R+ + + V +YS L A Q
Sbjct: 69 AMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTD--VPQYSGDRCLPAQQ 126
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELDQFM Y +L + ++L + ++ E E+ + +
Sbjct: 127 --PAADPELDQFMETYCYMLTRYGQELARPIQ-----------EAEEFFRGI-------- 165
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
E+Q+DS A D S + D + G +P +S V + L Y
Sbjct: 166 ---------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKY 214
Query: 351 KEKIVDIREEILRKRR--AGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + EI K++ G LP D L WW H +WPYP+
Sbjct: 215 SGYLNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 258
>gi|356501985|ref|XP_003519803.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 308
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 99/224 (44%), Gaps = 43/224 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ-----SQHVVSKYSALGAGQG 231
KA+I SHP Y +LL A++ C ++ P ++ R+ ++ + VS + GA
Sbjct: 68 KAKIASHPHYPRLLQAYIECQKVGAPP-EIARLLEEIRRENDPCKSDAVSSSTCFGA--- 123
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TG--VSPG 288
D ELD+FM Y +L +K L + EA +IE L L TG VS
Sbjct: 124 ----DPELDEFMEAYCDMLVKYKSDLARPFD----EATTFLNKIEMQLSHLCTGASVSNV 175
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
G SD+D D DA DG L+G D +ELK L +
Sbjct: 176 SDDGGVSSDEDLSTGDGDAQ--DGQLKGED---------------------RELKDRLLR 212
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 213 KFGSHIGTLKLEFSKKKKKGKLPKEARQALLQWWNVHYKWPYPT 256
>gi|98962493|gb|ABF59514.1| shoot meristemless [Cardamine hirsuta]
Length = 383
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 38/223 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ +A G + +D
Sbjct: 123 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAVAAAASMGPTGCLGED 178
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGAT 294
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G T
Sbjct: 179 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 234
Query: 295 MSDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
D + E++VD + D P +R ELK +L +
Sbjct: 235 AMDRNNNGSSEEEVDMNNEFID---------------PQAEDR--------ELKGQLLRK 271
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 272 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 314
>gi|55669505|gb|AAV54620.1| homeobox transcription factor KN3 [Pinus taeda]
Length = 470
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 108/224 (48%), Gaps = 35/224 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRID--AQLAQSQHVVSKYSALGAGQGLVT 234
+A+I++H Y +L++A++ C ++ P + + +D + Q+QH V S V
Sbjct: 210 RAKIIAHVHYPRLVAAYIDCQKVGAPPEVVLELDDLSHKCQTQHCVPTIS--------VG 261
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D ELDQFM Y + ++E+L + + EA+ +IE L +LT +GT T
Sbjct: 262 ADPELDQFMEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGTLT-----KGTIRT 312
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMG----FGPLIPTESERSLMERVRQELKHELKQGY 350
S D D+ A S E D G F + P +R ELK +L + Y
Sbjct: 313 SSLDQGDERGDGA----ASSEEEDGSGGEVEFHEVDPHAEDR--------ELKDQLLRKY 360
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E L+K++ GKLP + L WW + KWPYP+ S
Sbjct: 361 SGYLSSLKQEFLKKKKKGKLPKEARQKLLDWWTRNYKWPYPSES 404
>gi|4589882|dbj|BAA76904.1| homeobox 20 [Nicotiana tabacum]
Length = 356
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 110/223 (49%), Gaps = 33/223 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP LL A++ C ++ P + + R+ A + Q V + S+ V+ D
Sbjct: 106 KAKIIAHPQCSNLLDAYMDCQKVGAPPEVVARLSA-VRQEFEVRQRDSSTDRD---VSKD 161
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + EA+ +IE L L EG G++
Sbjct: 162 PELDQFMEAYYDMLVKYREELTRPLH----EAMDFMRKIETQLNMLEDKC--EGVGSS-- 213
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+E+Q +S G E P+ + P +R ELK+ L + Y +
Sbjct: 214 --EEEQDNSG-----GETEIPE------IDPRAEDR--------ELKNHLLRKYSGYLSS 252
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 253 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 295
>gi|114432128|gb|ABI74672.1| class I KNOX-like 1 protein [Elaeis guineensis]
Length = 352
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 108/231 (46%), Gaps = 35/231 (15%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
++ N+ KA+I++HP Y +LLSA+V C ++ P + + R++ A S + S+ AG
Sbjct: 82 DYDNSVIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEACATSLMMGRASSSSAAG 141
Query: 230 QGLVT----DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV 285
G +D LDQFM Y +L ++++L + + EA++ I+ +SL+
Sbjct: 142 DGGSGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIDAQFKSLSLS 197
Query: 286 SPGE----GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE 341
+P G + E++ + N D E +E
Sbjct: 198 TPPPPQVYGEQLERNGSSEEEFGASENYVDPQAED-----------------------RE 234
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LK +L + Y + +++E L+KR+ GKLP + L WW H KWPYP+
Sbjct: 235 LKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQLLDWWNRHYKWPYPS 285
>gi|33333548|gb|AAQ11890.1| knotted 3 [Nicotiana tabacum]
Length = 340
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP LL A++ C ++ P + + R+ A + Q V + S+ + D
Sbjct: 80 KAKIIAHPQCSNLLDAYMDCQKVGAPPEVVARLSA-VRQEFEVRQRDSSTDRN---IAKD 135
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + EA+ +IE L L G G
Sbjct: 136 PELDQFMEAYYDMLVKYREELTRPLH----EAMDFMRKIETQLNML-------GNGPVRI 184
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+ ED + + S E D G IP R+ +ELK+ L + Y +
Sbjct: 185 FNSEDNCEGVGS----SEEEQDNSGGETEIPQIDPRA----EDRELKNHLLRKYSGYLSS 236
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 237 LKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 279
>gi|22023962|gb|AAM89270.1|AF527947_1 homeodomain protein BOSTM-1 [Brassica oleracea]
Length = 380
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 134/289 (46%), Gaps = 45/289 (15%)
Query: 113 HRNHSDVI--DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVN 170
H HS ++ +TP + V S+ ++ + + N+++E + A G+
Sbjct: 61 HHQHSSLLFLQSLTPPSQEAKNKVRSSCSPSSGAPAYSFMEINHQNELL-----AGGLNP 115
Query: 171 WQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
+A KA+I+ HP Y +LL A+V C ++ P P + A+L ++ + +A
Sbjct: 116 CSSASVKAKIMGHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPT 171
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--- 287
G + +D LDQFM Y +L ++++L + + EA++ +E +SL+ SP
Sbjct: 172 GSLGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSPF 227
Query: 288 -GEGTGATMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
G G A +++ E++VD + D P +R ELK
Sbjct: 228 SGYGEAAIERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELK 264
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 265 GQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|224063413|ref|XP_002301134.1| predicted protein [Populus trichocarpa]
gi|222842860|gb|EEE80407.1| predicted protein [Populus trichocarpa]
gi|225626279|gb|ACN97189.1| KNOX transcription factor [Populus trichocarpa]
Length = 368
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 108/225 (48%), Gaps = 41/225 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQS-QHVVSKYSALGAGQGLVTD 235
KA+I++HP Y L+ A++ C ++ P P + A+LA + Q S+ + + +
Sbjct: 109 KAKIIAHPQYSNLMEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRD-NSK 163
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV--------MACWEIEQSLQSLTGVSP 287
D ELDQFM Y +L ++E+L + ++ AM+ + M C L+
Sbjct: 164 DPELDQFMEAYYDMLVKYREELTRPIQ-EAMDFMRRIETQLNMIC---HGPLRIFNSDDK 219
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G+ S+DD+D + L P I +E +ELK+ L
Sbjct: 220 SEGVGS--SEDDQDNSGGETEL--------------PEIDPRAED-------RELKNHLL 256
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 257 RKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|55276122|gb|AAV49802.1| homeobox transcription factor KN3 [Populus trichocarpa x Populus
deltoides]
Length = 368
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 104/224 (46%), Gaps = 39/224 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y L+ A++ C ++ P P + A+LA ++ + D
Sbjct: 109 KAKIIAHPQYSNLMEAYMDCQKVGAP----PEVVARLAAARQEFESRQRSFITSRDNSKD 164
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV--------MACWEIEQSLQSLTGVSPG 288
ELDQFM Y +L ++E+L + ++ AM+ + M C L+
Sbjct: 165 PELDQFMEAYYDMLVKYREELTRPIQ-EAMDFMRRIETQLNMIC---HGPLRIFNSDDKS 220
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG G+ S+DD+D + L P I +E +ELK+ L +
Sbjct: 221 EGVGS--SEDDQDNSGGETEL--------------PEIDPRAED-------RELKNHLLR 257
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 258 KYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 301
>gi|145280672|gb|AAT72917.2| class 1 knox [Dendrobium nobile]
Length = 287
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 98/219 (44%), Gaps = 30/219 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD---QLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
KA I SHP Y LL A++ C ++ P D L I + A + V S LG+
Sbjct: 42 KARIASHPRYPHLLEAYIDCQKVGAPPDIASLLEDIRRENAGGERVASSSVILGS----- 96
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
D ELD+FM Y +L ++ L++ EA +E L L + G
Sbjct: 97 --DPELDEFMEMYCDVLVKYRRDLERPFD----EATAFLNTMEVQLSDLCKPTCRPALGP 150
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+SD E SD L G E P+ S ++ ++LK +L + Y
Sbjct: 151 YVSD--EAVGSSDEELSGGEGEAPE--------------SHLKGEERDLKEKLLRKYSGY 194
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E +K++ GKLP + +L WW +H KWPYPT
Sbjct: 195 LSSLKQEFSKKKKKGKLPKEARQILFEWWTAHYKWPYPT 233
>gi|15220767|ref|NP_176426.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
gi|20141647|sp|Q38874.2|STM_ARATH RecName: Full=Homeobox protein SHOOT MERISTEMLESS
gi|332195837|gb|AEE33958.1| homeobox protein SHOOT MERISTEMLESS [Arabidopsis thaliana]
Length = 382
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 38/223 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGAT 294
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G T
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 295 MSDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
D + E++VD + D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|307335622|gb|ADN43388.1| KNOX1 [Agave tequilana]
Length = 357
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 113/245 (46%), Gaps = 39/245 (15%)
Query: 159 VVVESGADGVVNWQN-ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQ 217
SG+ +V+ + A KA+I+SHP Y LL A++ C ++ + R+ A +A+
Sbjct: 71 AAASSGSRSIVSTDDEAIIKAKIISHPHYSALLGAYMDCQKVGASPEVAARLSA-VAREI 129
Query: 218 HVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQ 277
+ S +D ELDQFM Y +L ++E+L + ++ EA+ +E
Sbjct: 130 EARQQASMSCRRDASSAEDPELDQFMEAYCNMLVKYREELTRPLQ----EAMNFFRGVES 185
Query: 278 SLQSLTGVSPG----------EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIP 327
L SLT + EG G + +EDQ DS G E P+ + P
Sbjct: 186 QLNSLTNGATASIFSAADEKCEGVGFS----EEDQDDSG-----GEAEHPE------IDP 230
Query: 328 TESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSK 387
++ ELK L + Y + +R E+ +K++ GKLP + L +WW+ H K
Sbjct: 231 RAEDK--------ELKRHLLKKYSRYLSSLRHELSKKKKKGKLPKEARQKLLNWWELHYK 282
Query: 388 WPYPT 392
WPYP+
Sbjct: 283 WPYPS 287
>gi|449454010|ref|XP_004144749.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
gi|449490809|ref|XP_004158713.1| PREDICTED: homeobox protein knotted-1-like 1-like [Cucumis sativus]
Length = 321
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I++HPLY +L+SA++ C ++ P Q+ + ++ + H LGA D
Sbjct: 61 KTQIVNHPLYPKLVSAYIECQKVGAP-PQVASLLEEIGRENHPSRSSIELGA-------D 112
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
+LD FM Y +L +K +L + EA M IE L +L +G+ MS
Sbjct: 113 PQLDNFMESYCEVLHQYKNELSKPFD----EATMFLTNIELELSNLC-----KGSFTMMS 163
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D D G+ E + +P E + + Q+LK L + Y +
Sbjct: 164 DSRSAMNDE----VSGTPEEEPSSYEEVEMPRNHEPFCIRKTNQDLKEMLLKKYSGYLSS 219
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E L+KR+ KLP D L WW +H KWPYPT
Sbjct: 220 LKKEFLKKRKKEKLPKDARMALLDWWNTHYKWPYPT 255
>gi|1167916|gb|AAC49148.1| class I knotted-like homeodomain containing protein; Method:
conceptual translation supplied by author [Arabidopsis
thaliana]
gi|1586022|prf||2202329A homeo domain protein
Length = 382
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 38/223 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGAT 294
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G T
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 233
Query: 295 MSDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
D + E++VD + D P +R ELK +L +
Sbjct: 234 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 270
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|94982884|gb|ABF50222.1| knox-like protein [Solanum tuberosum]
Length = 322
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 103/222 (46%), Gaps = 31/222 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKY---SALGAGQGLV 233
KA+I +HPLY LLSA++ C ++ P + I +++ +++S S +GA
Sbjct: 69 KAQIANHPLYPNLLSAYLQCRKVGAP-QGMTSILEEISNENNLISSSCHSSEIGA----- 122
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
D ELD+FM Y +L +KE+ + EA I+ L SL + T
Sbjct: 123 --DPELDKFMESYCAVLVKYKEEPSKPFD----EATSFLNNIKSQLSSLCKDNLITSTSF 176
Query: 294 TMSDD---DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+++ DE S+ +L +E D+ + ELK L + Y
Sbjct: 177 NSNNNYISDEAGGTSEEDLGCEEMEAADSPAY-------------REGDNELKEMLMRKY 223
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E L+KR+ GKLP + VL WW +H +WPYPT
Sbjct: 224 SGYLSSLRKEFLKKRKKGKLPKEARIVLLDWWNTHYRWPYPT 265
>gi|85543296|gb|ABC71528.1| KNOTTED1 homeodomain protein [Setaria italica]
Length = 344
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 33/219 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTD 235
+A+I+SHP Y LL+A++ C ++ P P + A+L A +Q + ++ G G T+
Sbjct: 95 RAKIISHPHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALGGLGAATE 150
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT--GVSPGEGTGA 293
ELDQFM Y +L F+E+L + ++ EA+ +E L SL+ G S +
Sbjct: 151 -PELDQFMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSS 205
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
S++D++ + + + G D QELKH L + Y
Sbjct: 206 GSSEEDQEGSGGETEIPEVDAHGED---------------------QELKHHLLKKYSGY 244
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E+ +K++ GKLP + L SW H KWPYP+
Sbjct: 245 LSSLKQELSKKKKKGKLPKEARQHLLSWRDLHYKWPYPS 283
>gi|115461893|ref|NP_001054546.1| Os05g0129700 [Oryza sativa Japonica Group]
gi|75139800|sp|Q7GDL5.1|KNOSA_ORYSJ RecName: Full=Homeobox protein knotted-1-like 10; AltName:
Full=Homeobox protein HOS9; AltName: Full=Homeobox
protein OSH71; AltName: Full=Homeobox protein
knotted-1-like 2; Short=Oskn2
gi|221272025|sp|A2Y007.2|KNOSA_ORYSI RecName: Full=Homeobox protein knotted-1-like 10; AltName:
Full=Homeobox protein HOS9; AltName: Full=Homeobox
protein OSH71; AltName: Full=Homeobox protein
knotted-1-like 2; Short=Oskn2
gi|2935573|gb|AAC32817.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
gi|4887610|dbj|BAA77818.1| HOS9 [Oryza sativa Japonica Group]
gi|5103729|dbj|BAA79226.1| knotted1-type homeobox protein OSH71 [Oryza sativa]
gi|51854371|gb|AAU10751.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
gi|113578097|dbj|BAF16460.1| Os05g0129700 [Oryza sativa Japonica Group]
gi|215767229|dbj|BAG99457.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196023|gb|EEC78450.1| hypothetical protein OsI_18312 [Oryza sativa Indica Group]
Length = 311
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 95/218 (43%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + G + D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--GEGTGAT 294
ELD+FM Y +L +KE+L + EA I L SL G +P + +
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAPPPTDNSDEM 167
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ +++ DA+ D FG E L + ELK L + Y +
Sbjct: 168 VGSSEDEPCSGDADAAD----------FG----QEHSSRLAD---HELKEMLLKKYSGCL 210
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 211 SRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 248
>gi|19424064|gb|AAL87330.1| putative homeobox protein [Arabidopsis thaliana]
Length = 326
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 108/223 (48%), Gaps = 38/223 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 66 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 121
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGAT 294
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G T
Sbjct: 122 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 177
Query: 295 MSDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
D + E++VD + D P +R ELK +L +
Sbjct: 178 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 214
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 215 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 257
>gi|356535016|ref|XP_003536045.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 2
[Glycine max]
Length = 293
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 108/220 (49%), Gaps = 35/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++I +HPLY L+SA++ C ++ P +L + ++A+ + +G DD
Sbjct: 52 KSQIATHPLYPNLVSAYIECRKVGAP-PELASLLEEIARESYPTDALREIG-------DD 103
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K++L + EA + IE L +L G T A +S
Sbjct: 104 PELDEFMESYCEVLHRYKQELSKPFN----EATLFLCSIESQLSNLC---KGTLTIAFLS 156
Query: 297 DD----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
D+ ED++ + ++EG ++ G P QELK L + Y
Sbjct: 157 DEAAGTSEDELSWEKV---EAVEGHESSGPRP-------------GDQELKEMLLRKYGG 200
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E L+KR+ GKLP D VL WW +H +WPYPT
Sbjct: 201 YLSSLKKEFLKKRKKGKLPKDARMVLMDWWNTHYRWPYPT 240
>gi|218193477|gb|EEC75904.1| hypothetical protein OsI_12972 [Oryza sativa Indica Group]
Length = 337
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 95/217 (43%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHPLY LL A + C ++ P + + R+ A + G + D
Sbjct: 63 KAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDMHLQGQ-----SSD 117
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y+ +L S++++L + ++ EA +E + S T G G +
Sbjct: 118 PELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGSEGGNSSE 173
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFG-PLIPTESERSLMERVRQELKHELKQGYKEKIV 355
D+ E G D G P I + +ELK L Y +
Sbjct: 174 DEQE-------------AGGGDMASAGLPEITSPCAED------KELKSHLLNKYSGYLS 214
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ E+ +K++ GKLP D L WWQ H +WPYP+
Sbjct: 215 SLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPS 251
>gi|144905100|dbj|BAF56426.1| SHOOTMERISTEMLESS-like protein [Ruscus aculeatus]
Length = 321
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 35/231 (15%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
++ N KA+I+SHP Y +LLSA++ C ++ P + + R++ A S ++ +A +
Sbjct: 37 DYDNNILKAKIMSHPHYPKLLSAYINCQKVGAPPEVVARLEE--ACSSSLMIGRAASSSS 94
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
V D LDQFM Y +L ++++L + + EA+M I+ +SL+ S
Sbjct: 95 SSAVGGDPALDQFMEAYCEMLTKYEQELSKPFK----EAMMFLSRIDAQFKSLSLSSSSP 150
Query: 290 GTGATMSDD------DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELK 343
T +++ D E+ VD N D P +R ELK
Sbjct: 151 PTTNSLNQDLERNNSSEEDVDVSENYVD---------------PQAEDR--------ELK 187
Query: 344 HELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+L + Y + +++E L+KR+ GKLP + L WW H KWPYP+ S
Sbjct: 188 GQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 238
>gi|75138249|sp|Q75LX7.1|KNOS4_ORYSJ RecName: Full=Homeobox protein knotted-1-like 4; AltName:
Full=Homeobox protein OSH10
gi|40538935|gb|AAR87192.1| putative KNOTTED-1-like homeobox protein [Oryza sativa Japonica
Group]
gi|222625532|gb|EEE59664.1| hypothetical protein OsJ_12066 [Oryza sativa Japonica Group]
Length = 337
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 98/218 (44%), Gaps = 31/218 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ-SQHVVSKYSALGAGQGLVTD 235
KA+I+SHPLY LL A + C ++ P + + R+ A + +Y GQ +
Sbjct: 63 KAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYLQ---GQ---SS 116
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D ELD+FM Y+ +L S++++L + ++ EA +E + S T G G +
Sbjct: 117 DPELDEFMETYIDMLVSYRQELTRPIQ----EADQFFRNMEAQIDSFTLDDNGSEGGNSS 172
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFG-PLIPTESERSLMERVRQELKHELKQGYKEKI 354
D+ E G D G P I + +ELK L Y +
Sbjct: 173 EDEQE-------------AGGGDMASAGLPEITSPCAED------KELKSHLLNKYSGYL 213
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ E+ +K++ GKLP D L WWQ H +WPYP+
Sbjct: 214 SSLWRELSKKKKKGKLPRDARQKLLHWWQLHYRWPYPS 251
>gi|357111616|ref|XP_003557608.1| PREDICTED: homeobox protein knotted-1-like 12-like [Brachypodium
distachyon]
Length = 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 103/216 (47%), Gaps = 31/216 (14%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y LL+A++ C ++ P + + ++ A A+ G D ELD
Sbjct: 94 VAHPQYSALLAAYLDCQKVGAPPEVMEKLTAMAAKLP---------SPGHHEQRGDPELD 144
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS---D 297
QFM Y +L ++E+L + + EA+ +E L S+TG G G+ A +S D
Sbjct: 145 QFMEAYCNMLAKYREELTRPIE----EAMEFLKRVEAQLDSITGAGHG-GSSARLSLLAD 199
Query: 298 DDEDQVDSDANLFDGS-LEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
+ V S + D S E P P I +E +ELK++L + Y +
Sbjct: 200 GKSEGVGSSEDDMDVSGREDP------PEIDPRAED-------KELKYQLLKKYSGYLSS 246
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 247 LRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 282
>gi|371767708|gb|AEX56209.1| knotted-like 4 protein [Dactylorhiza fuchsii]
Length = 279
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 96/219 (43%), Gaps = 36/219 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD---QLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
KA I SHP Y LL A++ C ++ P D L I + A + + LGA
Sbjct: 41 KARIASHPRYPHLLEAYIDCQKVGAPPDIASVLDEIRREKAADKRGAAPNLILGA----- 95
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
D ELD+FM Y +L ++ L Q EA IE L L A
Sbjct: 96 --DPELDEFMEMYCDVLVKYRRDLAQPFD----EATAFLNTIEIQLSDLCK------PAA 143
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+SD E S+ L G +E P+ L + ER +LK +L + Y
Sbjct: 144 FISD--EAVGSSEEELSGGEVEVPE------LHSKDEER--------DLKEKLLRKYSGY 187
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E +K+R GKLP + +L WW +H KWPYPT
Sbjct: 188 LSSLKKEFSKKKRKGKLPREARQLLLDWWTAHYKWPYPT 226
>gi|3327271|dbj|BAA31699.1| PKn2 [Ipomoea nil]
Length = 322
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 43/222 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLR------IATPVDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
KA+I SHP Y +LL A++ C + IAT +D++ R D +L + + S LGA
Sbjct: 84 KAKIASHPCYPKLLHAYIDCQKVGAPPEIATVLDEIRREDDELRKRGGGGAVSSCLGA-- 141
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELD+FM Y +L +K L + EA IE L +L +
Sbjct: 142 -----DPELDEFMETYYDMLVKYKSDLSKPFH----EATTFLNTIETQLSNLCK----DE 188
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+GA SD+++ ++D + S+ + ++LK+ L + Y
Sbjct: 189 SGAVSSDEEDSGGETDIQ----------------------QESITKTEERQLKNTLLRKY 226
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 227 GSHLSSLKLEFSKKKKKGKLPKEARQTLLDWWSDHYKWPYPT 268
>gi|57116574|gb|AAW33775.1| STM1 protein [Streptocarpus saxorum]
Length = 353
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 43/226 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG--QGLVT 234
K++I++HP Y +LL+A+V+C +I P P + A+L + V + ++ G + V
Sbjct: 98 KSKIIAHPHYPRLLAAYVSCQKIGAP----PEVVAKL---EEVCASATSTGCRNERSCVG 150
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+D LDQFM Y +L ++++L + + +A++ E ++LT +S +GA
Sbjct: 151 EDPALDQFMEAYCGMLTKYEQELSKPFK----DAMLFFSRFECQFKALT-LSHSADSGAC 205
Query: 295 ------MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
+ E++ D + + D E ELK +L +
Sbjct: 206 DEAVLEQNGSSEEEFDVNNSFIDPQAE-----------------------DHELKGQLLR 242
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
Y + ++++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 243 KYSGYLGNLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 288
>gi|356554470|ref|XP_003545569.1| PREDICTED: homeobox protein SBH1-like isoform 2 [Glycine max]
Length = 330
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 33/220 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL-GAGQGLVTD 235
+ +I++HPL+ +LLS+++ CL++ P P + A L +S ++A G G + +
Sbjct: 79 RDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESCAKCESFNASSGRTGGSIGE 134
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D LDQFM Y +L ++++L + + EA++ IE L++L S A+
Sbjct: 135 DPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQLKALAVSSDFACNKASQ 190
Query: 296 SD-DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
S+ +++VD N D E +ELK +L + Y +
Sbjct: 191 SETSSQNEVDVHENNLDSQAED-----------------------RELKVQLLRKYSGYL 227
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E L+K++ GKLP + L WW H KWPYP+ S
Sbjct: 228 GSLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSES 267
>gi|356554468|ref|XP_003545568.1| PREDICTED: homeobox protein SBH1-like isoform 1 [Glycine max]
Length = 325
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 107/219 (48%), Gaps = 36/219 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL-GAGQGLVTD 235
+ +I++HPL+ +LLS+++ CL++ P P + A L +S ++A G G + +
Sbjct: 79 RDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEESCAKCESFNASSGRTGGSIGE 134
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D LDQFM Y +L ++++L + + EA++ IE L++L VS G T
Sbjct: 135 DPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQLKAL-AVSSDFGQSETS 189
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
S +++VD N D E +ELK +L + Y +
Sbjct: 190 S---QNEVDVHENNLDSQAED-----------------------RELKVQLLRKYSGYLG 223
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E L+K++ GKLP + L WW H KWPYP+ S
Sbjct: 224 SLKKEFLKKKKNGKLPKEARQQLLDWWNRHYKWPYPSES 262
>gi|225458942|ref|XP_002285521.1| PREDICTED: homeobox protein knotted-1-like 2 [Vitis vinifera]
Length = 370
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 39/224 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C ++ P P + +LA + + D
Sbjct: 111 KAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVERLAAVRQEFESRQRSSVTCRDASKD 166
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL--------TGVSPG 288
ELDQFM Y +L ++E+L + ++ EA IE L L T
Sbjct: 167 PELDQFMEAYYDMLVKYREELTRPLQ----EATDFMRRIESQLNMLSNGPVRIFTSDEKC 222
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG G++ +EDQ +S G E P+ + P +R ELK+ L +
Sbjct: 223 EGVGSS----EEDQDNSG-----GETELPE------IDPRAEDR--------ELKNHLLR 259
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E+ +K++ GKLP D L +WW+ H KWPYP+
Sbjct: 260 KYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 303
>gi|242042433|ref|XP_002468611.1| hypothetical protein SORBIDRAFT_01g048970 [Sorghum bicolor]
gi|241922465|gb|EER95609.1| hypothetical protein SORBIDRAFT_01g048970 [Sorghum bicolor]
Length = 145
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSA 225
K EI HPL EQL++AHV CLR+ATP+D LP IDAQLAQS ++ Y+A
Sbjct: 64 KGEIAVHPLCEQLVAAHVGCLRVATPIDHLPLIDAQLAQSSGLLHSYAA 112
>gi|165928771|gb|ABY74432.1| knotted-like homeobox protein [Kalanchoe x houghtonii]
Length = 386
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/220 (29%), Positives = 106/220 (48%), Gaps = 22/220 (10%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGL 232
A KA+I+SHP LL A++ C ++ P P++ AQL A + + + +
Sbjct: 117 AAIKAKIMSHPQCSNLLEAYMDCQKVGAP----PQVVAQLVAAREEFEKQQGSSSSSGKD 172
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTG 292
++ D ELDQFM Y +L ++E+L + ++ EA+ IE L +L G SP
Sbjct: 173 ISRDPELDQFMEAYYHMLLKYREELTRPLQ----EAMDFMRRIESQL-NLLGASPIRAYN 227
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
+ DE D + + G +T + P +R ELK L + Y
Sbjct: 228 PS----DEKSSDGVGSSEEEGDNGGETDQLPKIDPRAEDR--------ELKLHLMKKYSG 275
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E+ +KR+ GKLP + L +WW+ H KWPYP+
Sbjct: 276 YLSSLKQELSKKRKKGKLPKEARQKLLAWWELHYKWPYPS 315
>gi|218193479|gb|EEC75906.1| hypothetical protein OsI_12975 [Oryza sativa Indica Group]
Length = 336
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 32/221 (14%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLV 233
A KA+I+SHPLY LL A V C ++ P + + R+ + + + S
Sbjct: 67 AMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTDELESYSGDRWQPAQQP 126
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
D ELDQFM Y +L + ++L + ++ E E+ + +
Sbjct: 127 AADPELDQFMETYCYMLTRYGQELARPIQ-----------EAEEFFRGI----------- 164
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
E+Q+DS A D S + D + G +P +S V + L Y
Sbjct: 165 ------EEQIDSLALDEDVSYDYEDEVAGG--LPEKSAAFGENEVTTTTRRHLMNKYSGY 216
Query: 354 IVDIREEILRKRR--AGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + EI K++ G LP D L WW H +WPYP+
Sbjct: 217 LNSLWTEISNKKKNSTGHLPRDARHKLLQWWHLHYRWPYPS 257
>gi|350537947|ref|NP_001233807.1| homeotic protein knotted-1 [Solanum lycopersicum]
gi|3023974|sp|Q41330.1|KN1_SOLLC RecName: Full=Homeotic protein knotted-1; Short=TKN1
gi|1256575|gb|AAC49251.1| Knotted 1 (TKn1) [Solanum lycopersicum]
gi|1588258|prf||2208273A Knotted-1 gene
Length = 355
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 108/232 (46%), Gaps = 41/232 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP LL A++ C ++ P P + A+L+ + V+ D
Sbjct: 95 KAKIIAHPQCSNLLDAYMDCQKVGAP----PEVAARLSAVRQEFEARQRRSLTDRDVSKD 150
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--------- 287
ELDQFM Y +L ++E+L + ++ EA+ +IE L L G +P
Sbjct: 151 PELDQFMEAYYDMLVKYREELTRPLQ----EAMEFMQKIEAQLNML-GNAPVRIFNSEDK 205
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G+ S++D+D + L P I +E +ELK+ L
Sbjct: 206 CEGVGS--SEEDQDNSGGETEL--------------PEIDPRAED-------RELKNHLL 242
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ Y + +++E+ +K++ GKLP D L +WW+ H KWPYP+ S L
Sbjct: 243 RKYSGYLSSLKQELSKKKKKGKLPKDARQKLITWWELHYKWPYPSESEKVAL 294
>gi|224110918|ref|XP_002315682.1| predicted protein [Populus trichocarpa]
gi|222864722|gb|EEF01853.1| predicted protein [Populus trichocarpa]
Length = 309
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 106/227 (46%), Gaps = 43/227 (18%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATP------VDQLPRIDAQLAQSQHVVSKYSAL 226
+A KA+I SHP Y +LL A++ C ++ P +D++ R + Q VS Y
Sbjct: 66 SALIKAKIASHPCYPRLLEAYIDCQKVGAPPGIACFLDEIRRENDLF--KQDAVSTY--W 121
Query: 227 GAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 286
GA D ELD+FM Y LL +K L++ EA +IE L++L
Sbjct: 122 GA-------DPELDEFMETYCDLLVKYKSDLERPFD----EATTFLNKIEMQLRNLC--- 167
Query: 287 PGEGTGATM-SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
TGA++ S DE SD L G L+ + P+ +R ELK +
Sbjct: 168 ----TGASIRSISDEGAPSSDEELSGGELDMHEAQ------PSGEDR--------ELKDK 209
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + + I ++ E +K++ GKLP + L WW +H KWPYPT
Sbjct: 210 LLRRFGSHIGTLKLEFSKKKKKGKLPKEARQTLLGWWDAHYKWPYPT 256
>gi|380746841|gb|AFE48351.1| KNOTTED-like 1-1 homeodomain protein [Cuscuta pentagona]
Length = 390
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 39/228 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL A + C ++ P P + A+L ++ G + D
Sbjct: 106 KAKIVSHPHYFNLLEAFIDCQKVGAP----PEVVARLTTARQEAEGKQRASFGSIDFSKD 161
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQ-----SLTGVSPGEG- 290
ELDQFM Y L +E+L++ AME + IE L L + EG
Sbjct: 162 PELDQFMGAYCETLVKCREELERPF-AEAMEFMR---RIESQLNLLCDAPLRSIFNSEGD 217
Query: 291 ----TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
G S++D+D +A + D + P +R ELK+ L
Sbjct: 218 EKYCEGVGSSEEDQDNSGGEAEVRD-------------MDPRAQDR--------ELKNHL 256
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+ S
Sbjct: 257 LRKYSGYLSGLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPSES 304
>gi|162461591|ref|NP_001105331.1| homeobox protein rough sheath 1 [Zea mays]
gi|3024577|sp|Q41853.1|RSH1_MAIZE RecName: Full=Homeobox protein rough sheath 1
gi|1008879|gb|AAA86287.1| RS1 [Zea mays]
Length = 351
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 103/212 (48%), Gaps = 23/212 (10%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y LL+A++ C ++ P D L R+ A + +K A AG+ D ELD
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDASAAGRH-EPRDPELD 146
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE 300
QFM Y +L ++E+L + + AME + +E L ++G +++D
Sbjct: 147 QFMEAYCNMLVKYREELTRPID-EAMEFLK---RVEAQLDCISGGGGSSSARLSLADGKS 202
Query: 301 DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
+ V S + D + D P I +E +ELK++L + Y + +R+E
Sbjct: 203 EGVGSSEDDMDPNGRENDP----PEIDPRAED-------KELKYQLLKKYSGYLSSLRQE 251
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+K++ GKLP + L WW+ H KWPYP+
Sbjct: 252 FSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 283
>gi|302142140|emb|CBI19343.3| unnamed protein product [Vitis vinifera]
Length = 341
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 103/224 (45%), Gaps = 39/224 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C ++ P P + +LA + + D
Sbjct: 82 KAKIIAHPQYSNLLEAYMDCQKVGAP----PEVVERLAAVRQEFESRQRSSVTCRDASKD 137
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL--------TGVSPG 288
ELDQFM Y +L ++E+L + ++ EA IE L L T
Sbjct: 138 PELDQFMEAYYDMLVKYREELTRPLQ----EATDFMRRIESQLNMLSNGPVRIFTSDEKC 193
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG G++ +EDQ +S G E P+ + P +R ELK+ L +
Sbjct: 194 EGVGSS----EEDQDNSG-----GETELPE------IDPRAEDR--------ELKNHLLR 230
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E+ +K++ GKLP D L +WW+ H KWPYP+
Sbjct: 231 KYSGYLSSLKQELSKKKKKGKLPKDARQKLLNWWELHYKWPYPS 274
>gi|20139943|sp|Q9M6D9.1|STM_BRAOL RecName: Full=Homeobox protein SHOOT MERISTEMLESS
gi|7340350|gb|AAF23753.2|AF193813_1 shoot meristemless [Brassica oleracea]
Length = 383
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 108/222 (48%), Gaps = 37/222 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 124 KAKIMAHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAAASMGPTGSLGED 179
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP---GEGTGA 293
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G A
Sbjct: 180 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSLSSPSSLGYGEAA 235
Query: 294 TMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
+++ E++VD + D P +R ELK +L + Y
Sbjct: 236 IERNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRKY 272
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 273 SGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 314
>gi|290796117|gb|ADD64788.1| SHOOT MERISTEMLESS [Brassica rapa]
Length = 382
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 38/235 (16%)
Query: 165 ADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS 224
A G+ +A KA+I+ HP Y +LL A+V C ++ P P + A+L ++ + +
Sbjct: 110 AGGLNPCSSASVKAKIMGHPHYHRLLLAYVNCQKVGAP----PEVQARLEETCSSAAAAA 165
Query: 225 ALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG 284
A G + +D LDQFM Y +L ++++L + + EA++ +E +SL+
Sbjct: 166 ASMGPTGSLGEDPGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQHVECQFKSLSL 221
Query: 285 VSP----GEGTGATMSDDD---EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
SP G G A +++ E++VD + D E
Sbjct: 222 SSPSSFSGYGEAAIERNNNGSSEEEVDMNNEFVDPQAE---------------------- 259
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK +L + Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 260 -DWELKGQLLRKYSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 313
>gi|297837183|ref|XP_002886473.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
lyrata]
gi|297332314|gb|EFH62732.1| hypothetical protein ARALYDRAFT_338146 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 107/223 (47%), Gaps = 38/223 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + +L ++ + +A G + +D
Sbjct: 72 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVVRLEEACSSAAAAAASMGPTGCLGED 127
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE--GTGAT 294
LDQFM Y +L ++++L + + EA++ +E +SL+ SP G G T
Sbjct: 128 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSGYGET 183
Query: 295 MSDDD-----EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
D + E++VD + D P +R ELK +L +
Sbjct: 184 AIDRNNNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRK 220
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 221 YSGYLGSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 263
>gi|242042882|ref|XP_002459312.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
gi|241922689|gb|EER95833.1| hypothetical protein SORBIDRAFT_02g002200 [Sorghum bicolor]
Length = 356
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 44/227 (19%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P D L R+ A + +K A G+ D
Sbjct: 95 KAKIVAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDARPPGRH-EPRD 146
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSL-----------QSLTGV 285
ELDQFM Y +L ++E+L + + EA+ +E L + +
Sbjct: 147 PELDQFMEAYCNMLVKYREELTRPID----EAMEFLKRVEAQLDSISGGGGSSSSARLSL 202
Query: 286 SPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHE 345
+ G+ G S+DD D G P P I +E +ELK++
Sbjct: 203 TDGKSEGVGSSEDDMDP--------SGRENDP------PEIDPRAED-------KELKYQ 241
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 242 LLKKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 288
>gi|66865825|gb|AAY57561.1| liguleless 3 [Zea mays]
Length = 216
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 96/217 (44%), Gaps = 34/217 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P + + L + VS+ AG G + D
Sbjct: 29 KAQIASHPRYPSLLSAYIECRKVGAH----PHVTSLLEE----VSRERRPDAGAGEIGVD 80
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +KE+L + EA I+ L L AT S
Sbjct: 81 PELDEFMDAYCRVLVRYKEELTRPFD----EAASFLSSIQAQLSDLCSGGSSPAATATHS 136
Query: 297 DD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYK 351
DD +++Q D ++ D E +G ELK L + Y
Sbjct: 137 DDMMGSSEDEQCSGDTDVPDMGQEHSSHLG-----------------DHELKEMLLKKYS 179
Query: 352 EKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKW 388
+ +R E L+KR+ GKLP D +VL WW +H +W
Sbjct: 180 GCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRW 216
>gi|110294442|gb|ABG66654.1| BREVIPEDICELLUS [Cardamine hirsuta]
Length = 396
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 109/225 (48%), Gaps = 34/225 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA--QLAQSQHVVSKYSALGAGQGLVT 234
KA+I++HP Y LL A++ C +I P + + +I A Q ++ + S S + +
Sbjct: 133 KAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDKITAARQEFEAHQLRSTPSVTESSR---- 188
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG-----VSPGE 289
D ELDQFM Y +L ++E+L + ++ AME + IE L L ++ +
Sbjct: 189 -DPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQLSMLCQGPIHILNNPD 243
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
G M DE+Q ++ G E + P +R ELK+ L +
Sbjct: 244 GKSEGMVSSDEEQENNSG----GETE------LAEIDPRAEDR--------ELKNHLLKK 285
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
Y + +++E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 286 YSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 330
>gi|225456981|ref|XP_002282076.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
gi|297733756|emb|CBI15003.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 94/217 (43%), Gaps = 31/217 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
+A+I +HPLY +LL A++ C ++ P P + A L + S+ A + D
Sbjct: 81 RAKIATHPLYPKLLHAYIECQKVGAP----PEV-AYLLEEIRRGSELCRRNAVSTCLGAD 135
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K L + EA IE L +L GA+ S
Sbjct: 136 PELDEFMETYCDILVKYKSDLARPFD----EATAFLNNIETQLNTLC-------NGASRS 184
Query: 297 D-DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
DE S+ +L G +E + L QELK +L + Y I
Sbjct: 185 YVSDEAAGSSEEDLSGGEVE--------------VQECLQTTENQELKDKLLRKYSGYIS 230
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E + ++ GKLP + L WW H KWPYPT
Sbjct: 231 TLKHEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPT 267
>gi|449529644|ref|XP_004171808.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
2-like [Cucumis sativus]
Length = 397
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 36/224 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSK-YSALGAGQGLVTD 235
KA+ILSH L+ +L A + C + P P + A+L + + S++ +G +
Sbjct: 133 KAKILSHSLFSNILQAFLDCQNVGAP----PEVAAKLTSVREEFERQRSSMATAEG-SSI 187
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS-------PG 288
D ELDQFM Y +L ++E+L++ ++ EAV IE L +L S
Sbjct: 188 DPELDQFMEAYYGMLVKYREELRRPIQ----EAVDFMHRIESQLNTLCNGSFQILPSGKS 243
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG G++ ++ E + + + + ++ P ER ELK+ L +
Sbjct: 244 EGMGSSTEEEAEKGGEEEREIEEDQID-----------PRAEER--------ELKNHLXK 284
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E+ +K++ GKLP D L WW+ H+KWPYP+
Sbjct: 285 KYSGYLSSLKQELSKKKKKGKLPKDARQQLLRWWELHNKWPYPS 328
>gi|7940290|gb|AAF70849.1|AC003113_16 F2401.9 [Arabidopsis thaliana]
Length = 377
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 107/218 (49%), Gaps = 33/218 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+V C ++ P P + A+L ++ + +A G + +D
Sbjct: 122 KAKIMAHPHYHRLLAAYVNCQKVGAP----PEVVARLEEACSSAAAAAASMGPTGCLGED 177
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
LDQFM Y +L ++++L + + EA++ +E +SL+ SP + +
Sbjct: 178 PGLDQFMEAYCEMLVKYEQELSKPFK----EAMVFLQRVECQFKSLSLSSPSSFSAIDRN 233
Query: 297 DD--DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
++ E++VD + D P +R ELK +L + Y +
Sbjct: 234 NNGSSEEEVDMNNEFVD---------------PQAEDR--------ELKGQLLRKYSGYL 270
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 271 GSLKQEFMKKRKKGKLPKEARQQLLDWWSRHYKWPYPS 308
>gi|371767734|gb|AEX56222.1| knotted-like 1 protein [Dactylorhiza fuchsii]
Length = 298
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAG 229
++ KA+I+SHP Y +LL ++ ++ P + + R++ A S A G
Sbjct: 38 GYETTLLKAKIMSHPQYPRLLPTYINLHKVGAPPEVVARLEEACASSLISCGPGGAASGG 97
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPG 288
+ D LDQFM Y +L ++++L + + EA++ I+ +SL+ P
Sbjct: 98 E-----DPALDQFMEAYCEMLAKYEQELSKPFK----EAMLFLSRIDAQFKSLSLSFPPA 148
Query: 289 EGTGATMSDDD--EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
A + ED +D N D P +R ELK +L
Sbjct: 149 PQVCADFEKNGSSEDDIDLRDNYVD---------------PEAGDR--------ELKGQL 185
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ Y + +++E L+KR+ GKLP + L WW H KWPYP+ S
Sbjct: 186 LRKYSGYLGSLKQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 233
>gi|295149266|gb|ADF81046.1| KNOTTED-like homebox protein 1 [Cocos nucifera]
Length = 333
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 110/234 (47%), Gaps = 35/234 (14%)
Query: 167 GVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
G ++ ++ KA+I++HP Y +LLSA+V C ++ P + + R++ A S + S+
Sbjct: 60 GGEDYDDSIIKAKIMAHPQYPRLLSAYVNCHKVGAPPEVVARLEEACATSLMMGRASSSA 119
Query: 227 GAGQGLVT----DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 282
AG G +D LDQFM Y +L ++++L + + EA++ I+ +SL
Sbjct: 120 AAGDGGSGGGGGEDPALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRIDAQFKSL 175
Query: 283 TGVSPGE----GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERV 338
+ +P G + E++ + + D P +R
Sbjct: 176 SLSTPPPPQVYGEQLERNGSSEEEFGASGSYVD---------------PQAEDR------ 214
Query: 339 RQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK +L + Y + +++E L+KR+ GKLP + L WW H KWPYP+
Sbjct: 215 --ELKGQLLRKYSGYLSSLKQEFLKKRKKGKLPKEARQQLLDWWNRHYKWPYPS 266
>gi|356535014|ref|XP_003536044.1| PREDICTED: homeobox protein knotted-1-like 1-like isoform 1
[Glycine max]
Length = 296
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 103/217 (47%), Gaps = 26/217 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++I +HPLY L+SA++ C ++ P +L + ++A+ + +G DD
Sbjct: 52 KSQIATHPLYPNLVSAYIECRKVGAP-PELASLLEEIARESYPTDALREIG-------DD 103
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K++L + EA + IE L +L G
Sbjct: 104 PELDEFMESYCEVLHRYKQELSKPFN----EATLFLCSIESQLSNLC-------KGTLTM 152
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVR-QELKHELKQGYKEKIV 355
D + D A G+ E D + + + E S R QELK L + Y +
Sbjct: 153 PLDNNHSDEAA----GTSE--DELSWEKVEAVEGHESSGPRPGDQELKEMLLRKYGGYLS 206
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E L+KR+ GKLP D VL WW +H +WPYPT
Sbjct: 207 SLKKEFLKKRKKGKLPKDARMVLMDWWNTHYRWPYPT 243
>gi|449440664|ref|XP_004138104.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
gi|449477432|ref|XP_004155021.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 308
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/238 (24%), Positives = 102/238 (42%), Gaps = 41/238 (17%)
Query: 155 KSEGVVVESGADGVVNWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLA 214
K+ + E + GV+ +A+I SHPLY +L+ A + C +++ P ++ +I Q
Sbjct: 65 KTACAISEEESAGVI-------RAKIASHPLYPKLVDAFLNCQKVSAP-PEVAKILDQYN 116
Query: 215 QSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE 274
+ ++ ++ + G D ELD+FM + LL ++ L Q + EA
Sbjct: 117 RGNNIGNENPGVSTCLG---TDPELDEFMEIFCELLAKYELDLYQPLE----EASAFLKN 169
Query: 275 IEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSL 334
+E+ L L E T D+E + D + G + G
Sbjct: 170 MERQLNLLC-----EDTTRGYVSDNEAASEEDISA-RGEVAGNKD--------------- 208
Query: 335 MERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y I +++E + ++ LP + +L +WW HS+WPYPT
Sbjct: 209 -----GELKERLLRKYGGHISSLKQEFSKTKKKEGLPKEAKQILLNWWNFHSQWPYPT 261
>gi|117644096|emb|CAL49292.1| putative shoot meristemless ortholog 1 [Silene latifolia]
Length = 271
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 107/230 (46%), Gaps = 48/230 (20%)
Query: 179 EILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKE 238
+I++HP Y +L+SA V C ++ P P + A+L +++ ++ G G G + +D
Sbjct: 1 KIMAHPHYPRLISAFVNCQKVGAP----PEVVARLEEAE-AMAMNQGGGGGGGYIGEDPG 55
Query: 239 LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS--------------LTG 284
LDQFM Y +L ++++L + + EA++ +I+ ++ + G
Sbjct: 56 LDQFMEAYSEMLTKYEQELSKPFK----EAMLFLSKIDCQXKALTLSSSLDSPSSDLVPG 111
Query: 285 VSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
GTG S ED++D + N D S E +ELK
Sbjct: 112 AHDDAGTGRNGSS--EDEIDVNNNFIDPSAED-----------------------RELKG 146
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+L + Y + +R+E L+KR+ GKLP + L WW H KWPYP+ S
Sbjct: 147 QLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 196
>gi|290782316|gb|ADD62366.1| KNOX6 variant a [Medicago truncatula]
Length = 298
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 147 MNNASTNNKSEGVVVESGADGVVNWQN----------ARYKAEILSHPLYEQLLSAHVAC 196
M N TN K + + + GV N N + +I++HPL+ +LLS+++ C
Sbjct: 7 MMNMETNRKFFSFPLSNNSSGVQNHHNYTQHQNNTNNNTCRDKIMAHPLFPRLLSSYLNC 66
Query: 197 LRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQ 256
L++ P + + ++ A+ + + G+ + +D LDQFM Y +L ++++
Sbjct: 67 LKVGAPPEVVASLEESCAKCEILNGSSGRTGSSSSCIGEDPGLDQFMEAYCEMLIKYEQE 126
Query: 257 LQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEG 316
L + + EA++ IE L+++ VS G + +E +D N D + +G
Sbjct: 127 LTKPFK----EAMLFLSRIESQLKAV-AVSTDFGQSEFAASQNE--IDVHENNLDTT-QG 178
Query: 317 PDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 376
D QELK +L + Y + +++E L+K++ GKLP +
Sbjct: 179 ED---------------------QELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQ 217
Query: 377 VLKSWWQSHSKWPYPTVS 394
L WW H KWPYP+ S
Sbjct: 218 QLLDWWSRHYKWPYPSES 235
>gi|15991302|dbj|BAB69679.1| homeodomain transcription factor KNAT6 [Arabidopsis thaliana]
Length = 326
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 30/219 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLR--IATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
KA+I HP Y +LL A++ C + + P P I L + Q Y
Sbjct: 83 KAKIACHPSYPRLLQAYIDCQKKQVGAP----PEIACLLEEIQRESDVYKQEVVPSSCFG 138
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGA 293
D ELD+FM Y +L +K L + EA +IE L++L TGV G
Sbjct: 139 ADPELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSE 194
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
DG + + + G E R E ++LK L + + +
Sbjct: 195 -----------------DGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGSR 235
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 236 ISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 274
>gi|449467124|ref|XP_004151275.1| PREDICTED: homeobox protein knotted-1-like 2-like [Cucumis sativus]
Length = 397
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 108/224 (48%), Gaps = 36/224 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSK-YSALGAGQGLVTD 235
KA+ILSH L+ +L A + C + P P + A+L + + S++ +G +
Sbjct: 133 KAKILSHSLFSNILQAFLDCQNVGAP----PEVAAKLTSVREEFERQRSSMATAEG-SSI 187
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS-------PG 288
D ELDQFM Y +L ++E+L++ ++ EAV IE L +L S
Sbjct: 188 DPELDQFMEAYYGMLVKYREELRRPIQ----EAVDFMHRIESQLNTLCNGSFQILPSGKS 243
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
EG G++ ++ E + + + + ++ P ER ELK+ L +
Sbjct: 244 EGMGSSTEEEAEKGGEEEREIEEDQID-----------PRAEER--------ELKNHLLK 284
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +++E+ +K++ GKLP D L WW+ H+KWPYP+
Sbjct: 285 KYSGYLSSLKQELSKKKKKGKLPKDARQQLLRWWELHNKWPYPS 328
>gi|145336056|ref|NP_173752.3| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
gi|332192259|gb|AEE30380.1| homeobox protein knotted-1-like 6 [Arabidopsis thaliana]
Length = 329
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 30/219 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLR--IATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
KA+I HP Y +LL A++ C + + P P I L + Q Y
Sbjct: 86 KAKIACHPSYPRLLQAYIDCQKKQVGAP----PEIACLLEEIQRESDVYKQEVVPSSCFG 141
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGA 293
D ELD+FM Y +L +K L + EA +IE L++L TGV G
Sbjct: 142 ADPELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVSE 197
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
DG + + + G E R E ++LK L + + +
Sbjct: 198 -----------------DGVISSDEELSGGDHEVAEDGRQRCED--RDLKDRLLRKFGSR 238
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 ISTLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 277
>gi|4589884|dbj|BAA76905.1| homeobox 22 [Nicotiana tabacum]
Length = 319
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 95/216 (43%), Gaps = 37/216 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+++SHP Y + + A++ C ++ P P I A + + + + A + D
Sbjct: 89 KAKVVSHPFYPKFVRAYIDCQKVGAP----PEI-ATVLEEIRQQNDFRKPNATSICIGAD 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K L + EA +IE L +L
Sbjct: 144 PELDEFMETYCDILVKYKSDLSRPFD----EATTFLSKIELQLSNLCK------------ 187
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D+ V SD L G +EG D S+RS ELK L + + +
Sbjct: 188 --DDGGVSSDEELSCGEVEGQDA----------SQRS----EDNELKDRLLRKFGSHLST 231
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + +L +WW H +WPYPT
Sbjct: 232 LKLEFSKKKKKGKLPKEARQMLLAWWNDHYRWPYPT 267
>gi|117644098|emb|CAL49293.1| shoot meristemless ortholog 2 [Silene latifolia]
Length = 276
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/232 (27%), Positives = 104/232 (44%), Gaps = 48/232 (20%)
Query: 179 EILSHPLYEQLLSAHVACLRIATPVDQLPRID----AQLAQSQHVVSKYSALGAGQGLVT 234
+I++HP Y +LLSA V C ++ P + + R++ A S G ++
Sbjct: 1 KIMAHPHYPRLLSAFVNCQKVGAPAEVVARLEEAEAAMTVSQGSRSGSGSGSGGQGYIIG 60
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT----------G 284
+ LDQFM Y +L ++++L + + EA++ IE ++LT G
Sbjct: 61 EXPALDQFMEAYSEMLTKYEQELTKPFK----EAMLFLSRIESQFKTLTLSSSSDSPSSG 116
Query: 285 VSP--GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQEL 342
+ GE G++ E+ +D + NL D +E +EL
Sbjct: 117 ICGDIGERNGSS-----EEDIDVNNNLIDPCVED-----------------------REL 148
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
K +L + Y + +R+E L+KR+ GKLP + L WW H KWPYP+ S
Sbjct: 149 KGQLLRKYSGYLGSLRQEFLKKRKKGKLPKEARQQLLDWWSRHYKWPYPSES 200
>gi|357493287|ref|XP_003616932.1| Homeobox protein [Medicago truncatula]
gi|132424661|gb|ABO33483.1| class I KNOX homeobox transcription factor [Medicago truncatula]
gi|355518267|gb|AES99890.1| Homeobox protein [Medicago truncatula]
Length = 312
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 119/258 (46%), Gaps = 39/258 (15%)
Query: 147 MNNASTNNKSEGVVVESGADGVVNWQN----------ARYKAEILSHPLYEQLLSAHVAC 196
M N TN K + + + GV N N + +I++HPL+ +LLS+++ C
Sbjct: 21 MMNMETNRKFFSFPLSNNSSGVQNHHNYTQHQNNTNNNTCRDKIMAHPLFPRLLSSYLNC 80
Query: 197 LRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQ 256
L++ P + + ++ A+ + + G+ + +D LDQFM Y +L ++++
Sbjct: 81 LKVGAPPEVVASLEESCAKCEILNGSSGRTGSSSSCIGEDPGLDQFMEAYCEMLIKYEQE 140
Query: 257 LQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEG 316
L + + EA++ IE L++ V+ G + ++++D N D + +G
Sbjct: 141 LTKPFK----EAMLFLSRIESQLKA---VAVSTDFGQSEFAASQNEIDVHENNLDTT-QG 192
Query: 317 PDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTS 376
D QELK +L + Y + +++E L+K++ GKLP +
Sbjct: 193 ED---------------------QELKVQLLRKYSGYLGSLKKEFLKKKKNGKLPKEARQ 231
Query: 377 VLKSWWQSHSKWPYPTVS 394
L WW H KWPYP+ S
Sbjct: 232 QLLDWWSRHYKWPYPSES 249
>gi|194688564|gb|ACF78366.1| unknown [Zea mays]
gi|414883466|tpg|DAA59480.1| TPA: rough sheath1 [Zea mays]
Length = 351
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 23/212 (10%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y LL+A++ C ++ P D L R+ A + +K A G+ D ELD
Sbjct: 95 VAHPQYSALLAAYLDCQKVGAPPDVLERLTA-------MAAKLDARPPGRH-EPRDPELD 146
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDE 300
QFM Y +L ++E+L + + AME + +E L ++G +++D
Sbjct: 147 QFMEAYCNMLVKYREELTRPID-EAMEFLK---RVEAQLDCISGGGGSSSARLSLADGKS 202
Query: 301 DQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREE 360
+ V S + D + D P I +E +ELK++L + Y + +R+E
Sbjct: 203 EGVGSSEDDMDPNGRENDP----PEIDPRAED-------KELKYQLLKKYSGYLSSLRQE 251
Query: 361 ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+K++ GKLP + L WW+ H KWPYP+
Sbjct: 252 FSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 283
>gi|224102455|ref|XP_002312684.1| predicted protein [Populus trichocarpa]
gi|222852504|gb|EEE90051.1| predicted protein [Populus trichocarpa]
Length = 337
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 110/231 (47%), Gaps = 30/231 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y +LL A++ C ++ P Q+ R ++ + + K+ A+ G D
Sbjct: 70 KAKIASHPSYPRLLEAYIDCQKVGAP-PQIARFLDEIRRENDLF-KHDAVSTYWGA---D 124
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQ---------SLQSLTGVS- 286
ELD+FM Y LL +K L++ EA +IE S++S++G S
Sbjct: 125 PELDEFMETYCDLLVKYKSDLERPFD----EATTFLNKIEMQFRNICTAASIRSVSGQSL 180
Query: 287 -----PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE 341
PG+ + + + + + N DG+ D + G + E++ S +R E
Sbjct: 181 SLSLFPGKDP---LGSELLNNISRNHNGSDGAPSSDDELSGGEMDMHEAQPSGEDR---E 234
Query: 342 LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
LK +L + + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 235 LKDKLLRRFGGHIGTLKREFSKKKKKGKLPKEARQTLLGWWNVHYKWPYPT 285
>gi|307335624|gb|ADN43389.1| KNOX2 [Agave tequilana]
Length = 291
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 99/223 (44%), Gaps = 13/223 (5%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I SHP Y LL A++ C ++ P + +D + + VV+K +A A G D
Sbjct: 37 KARIASHPRYPLLLQAYIDCQKVGAPPEIACLLDEITSSNGAVVNKRTAAAAFSGRFGSD 96
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD FM Y +L ++ L + + EA IE L L+ P + +
Sbjct: 97 PELDDFMERYCDVLMKYRSDLARSID----EATHFLNTIETQLSDLSNNKPPPPSRRSSP 152
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
++ A D + G +T E + ++ +LK +L + Y +
Sbjct: 153 LISSLLDEAAAGSSDEEVSGGET---------EVQEFHLKGESGDLKEKLLRKYSGYLSS 203
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
++ E +K++ GKLP + +L WW +H KWPYPT T L
Sbjct: 204 LKREFSKKKKKGKLPKEARQMLLEWWTAHYKWPYPTEGDKTAL 246
>gi|226508000|ref|NP_001149651.1| homeobox protein rough sheath 1 [Zea mays]
gi|32351469|gb|AAP76320.1| homeobox transcription factor GNARLY1 [Zea mays]
gi|195628960|gb|ACG36242.1| homeobox protein rough sheath 1 [Zea mays]
gi|414592152|tpg|DAA42723.1| TPA: gnarley1 [Zea mays]
Length = 360
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 106/225 (47%), Gaps = 39/225 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P D L R+ A + +K A G+ D
Sbjct: 95 KAKIVAHPQYSALLAAYLDCQKVGAPPDLLERLTA-------MAAKLDARPPGRH-GPRD 146
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHV--------RVHA-MEAVMACWEIEQSLQSLTGVSP 287
ELDQFM Y +L ++E+L + + RV A ++++ + SL
Sbjct: 147 PELDQFMEAYCNMLVKYREELTRPIDEAMEFLKRVEAQLDSIAGGGSSSSARLSLADGKS 206
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G++ DDD D G P P I +E +ELK++L
Sbjct: 207 SEGAGSS-EDDDMDP--------SGRENEP------PEIDPRAED-------KELKYQLL 244
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 245 KKYSGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 289
>gi|11463941|dbj|BAB18584.1| CRKNOX2 [Ceratopteris richardii]
Length = 430
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 111/242 (45%), Gaps = 45/242 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
+ +I+SHP Y +L+ A+V C +I P D ++ + Q + S S + + D
Sbjct: 132 RTKIVSHPSYPRLVMAYVNCYKIGAPEDAALILEEVSRKYQEIRSSSSEV------IGAD 185
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE-IEQSLQSLTGVS-----PGEG 290
ELD FM Y +L + E+L H + MA ++ IE L +++ S GE
Sbjct: 186 PELDNFMELYCNVLQRYHEEL-----THPYKEAMAFFKKIELQLDAISKGSLSLSQSGET 240
Query: 291 -------------TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMER 337
TGA S +DE + + ++ G ++ D M PL
Sbjct: 241 KTEANSDSAWHGQTGAAPSIEDEPE---EGDMSSGEVDFHDEM-IDPLAED--------- 287
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVT 397
Q+LK +L + Y I +++E L+K++ GKLP + +L WW H KWPYP+ + T
Sbjct: 288 --QKLKEQLLRKYSGYIFKLKQEFLKKKKKGKLPREARQMLLDWWTQHYKWPYPSEAEKT 345
Query: 398 LL 399
L
Sbjct: 346 AL 347
>gi|300676307|gb|ADK26523.1| HERMIT-like protein 2 [Petunia x hybrida]
Length = 332
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 98/216 (45%), Gaps = 37/216 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y +LL A++ C ++ P + + ++ Q+ +++ G D
Sbjct: 102 KAKIISHPYYPKLLDAYIDCQKVGAPSEMINILEEMRQQNDFRKPNATSICIGA-----D 156
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K L + EA IE LQ LT + +G+ ++
Sbjct: 157 PELDEFMETYCDILVKYKSDLSRPFN----EATTFLNNIE--LQ-LTNLCKDDGSLSS-- 207
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DE+ +A + D S+ D ELK L + + +
Sbjct: 208 --DEEFSCGEAEVQDASMRSEDN---------------------ELKDRLLRKFGSHLST 244
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + +L +WW H +WPYPT
Sbjct: 245 LKLEFSKKKKKGKLPKEARQMLLAWWNDHYRWPYPT 280
>gi|60476412|gb|AAX21345.1| homeobox knotted-1-like protein KNOX1 [Lotus japonicus]
Length = 181
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 36/207 (17%)
Query: 188 QLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYV 247
+LL+A+V+C ++ P P + A+L ++ + G G + +D LDQFM Y
Sbjct: 2 RLLAAYVSCQKVGAP----PEVVARLEEACGSAVGMAGDAVGSGSIGEDPALDQFMEAYC 57
Query: 248 LLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG---VSPGEGTGATMSDDDEDQVD 304
+L ++++L + ++ EA++ IE ++LT V EGT DED
Sbjct: 58 EMLTKYEQELSKPLK----EAMLFLQRIEFQFKNLTASSDVGCNEGTERNTGSSDED--- 110
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
A+L++ +I ++E +ELK +L + Y + ++E ++K
Sbjct: 111 --ADLYN-------------MIDPQAED-------RELKGQLLRKYSGYLGSSKQEFMKK 148
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYP 391
R+ GKLP + WW H KWPYP
Sbjct: 149 RKKGKLPKEARQQFLEWWSRHYKWPYP 175
>gi|345649243|gb|AEO14152.1| STM2 protein [Eschscholzia californica subsp. californica]
Length = 385
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 106/226 (46%), Gaps = 35/226 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTD 235
+A+I++HP Y +LL+A++ C ++ P + + R+D L A + S G G L+ +
Sbjct: 116 RAKIMAHPHYPRLLAAYINCHKVGAPPEVVKRLDEILSADKVNRSRSSSTGGGGGVLLGE 175
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-------TGVSPG 288
D LDQFM Y +L +++QL + ++ EA++ + L+ L P
Sbjct: 176 DPSLDQFMEAYSEMLIKYEQQLTKPLQ----EAMLFLSSLHSQLKXLDTPLTNSPPPPPH 231
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
+G S D E +++ N D P +R ELK +L +
Sbjct: 232 SSSGQNGSSDGEIDANNNDNYID---------------PQAEDR--------ELKLQLLR 268
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
Y + +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 269 KYSGCLGSLKQEFMKKRKKGKLPKEAREQLLDWWSRHYKWPYPSES 314
>gi|356506913|ref|XP_003522218.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 1
[Glycine max]
Length = 361
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/227 (29%), Positives = 98/227 (43%), Gaps = 31/227 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+ HP Y LL ++ C ++ P P + A+ A + D
Sbjct: 102 KAKIIDHPHYSNLLQVYMDCQKVGAP----PEVAARFATVKENFEARQRSLVRSMETCKD 157
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + EA IE L +L GT S
Sbjct: 158 PELDQFMEAYYDMLVKYREELTRPIE----EAKDFMQRIESQLNTLCN-----GTVRIFS 208
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQ----ELKHELKQGYKE 352
DD + + S S E D G E L+E Q ELK L + Y
Sbjct: 209 DDKWENIGS------SSEEDKDNSG--------RETELIEIDPQAEDRELKSHLLKKYSG 254
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ +++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 255 YLGTLKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 301
>gi|189046914|dbj|BAG34610.1| class-I knotted1-like homeobox protein IBKN4 [Ipomoea batatas]
Length = 314
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 46/224 (20%)
Query: 177 KAEILSHPLYEQLLSAHVACLR------IATPVDQLPRIDAQLAQ--SQHVVSKYSALGA 228
KA+I SHP Y +LL A++ C + IAT +D++ R D +L + + S LGA
Sbjct: 75 KAKIASHPCYPKLLHAYIDCQKVGAPPEIATVLDEIRREDDELRKRGGGGGGAVSSCLGA 134
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
D ELD+FM Y +L +K L + EA IE L +L G
Sbjct: 135 -------DPELDEFMETYYDMLVKYKSDLSRPFH----EATTFLNTIETQLSNLCKDESG 183
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
GA S D+ED T+ + S+ + ++LK+ L +
Sbjct: 184 ---GA--SSDEEDSGGE----------------------TDIQESITKTEERQLKNTLLR 216
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 217 KYGSHLSSLKLEFSKKKKKGKLPKEARQTLLDWWSDHYKWPYPT 260
>gi|297850804|ref|XP_002893283.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
lyrata]
gi|297339125|gb|EFH69542.1| hypothetical protein ARALYDRAFT_472599 [Arabidopsis lyrata subsp.
lyrata]
Length = 329
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 30/219 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLR--IATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
K +I HP Y +LL A++ C + + P P I L + Q Y
Sbjct: 86 KTKIACHPSYPRLLQAYIDCQKKQVGAP----PEIACLLEEIQRESDVYKQEVVPSYCFG 141
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL-TGVSPGEGTGA 293
D ELD+FM Y +L +K L + EA +IE L++L TGV G
Sbjct: 142 ADPELDEFMETYCDILVKYKSDLARPFD----EATCFLNKIEMQLRNLCTGVESARGVS- 196
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
++ + SD L G E + + ++ +R +LK L + + +
Sbjct: 197 -----EDGAISSDEELSGGDHE----------LAEDGKQRCEDR---DLKDRLLRKFGSR 238
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 239 ISSLKLEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 277
>gi|5802260|gb|AAD51632.1|AF170172_1 KNOX1 homeodomain protein [Acetabularia acetabulum]
Length = 382
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 93/221 (42%), Gaps = 38/221 (17%)
Query: 179 EILSHPLYEQLLSAHVACLRIATPVDQLP-----RIDAQLAQSQHVVSKYSALGAGQGLV 233
+++ HPLY L+ A + C ++ +D+ R + L +Y G L
Sbjct: 59 QVIMHPLYPDLVKAIMDCRKVGG-MDESRHHIQIRTEQVLEDLHRKREQYQITGRMPAL- 116
Query: 234 TDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA 293
D ELDQF+ Y+ +L +L R M +I + + P +
Sbjct: 117 --DPELDQFLRQYIQVLDELHAELLNINREADNILHMFTTQIAEVINM-----PMDPRSM 169
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+ Q + D F+ I E E+ ++ LKQ Y+++
Sbjct: 170 HARNAFNAQSNIDMTWFE--------------IRNEQEQRVL----------LKQKYRQE 205
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
++ ++EE ++++ GKLP + VLKSWW+ H WPYPT S
Sbjct: 206 LLALKEEFSKRKKRGKLPTHSIEVLKSWWKEHIAWPYPTDS 246
>gi|63168778|gb|AAY34562.1| shoot meristemless-like protein [Eschscholzia californica subsp.
californica]
Length = 233
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 31/197 (15%)
Query: 198 RIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQL 257
R+ P P + A+L ++ + G+G G + +D LDQFM Y +L ++++L
Sbjct: 3 RVGAP----PEVVAKLEEANATGEAMARTGSGTGCIGEDPALDQFMEAYCEMLTKYQQEL 58
Query: 258 QQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGP 317
+ EA+M IE ++LT G + ++ +D++ N D
Sbjct: 59 TKPFE----EAMMFLSRIECQFKALTVSDSVGGEAVNRNGSSDEDIDANDNYID------ 108
Query: 318 DTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSV 377
P +R ELK +L + Y + +++E L+KR+ GKLP +
Sbjct: 109 ---------PQAEDR--------ELKGQLLRKYSGYLGSLKQEFLKKRKKGKLPKEARQQ 151
Query: 378 LKSWWQSHSKWPYPTVS 394
L WW H KWPYP+ S
Sbjct: 152 LLDWWSRHYKWPYPSES 168
>gi|169160088|gb|ACA49545.1| class 1 KNOX protein, partial [Corytoplectus speciosus]
Length = 245
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 101/208 (48%), Gaps = 33/208 (15%)
Query: 192 AHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLL 250
A++ C R+ P P + A+L A Q S+ A AG+ V+ D ELDQFM Y +L
Sbjct: 1 AYLDCQRVGAP----PEVVARLTAIRQEFESRQRAESAGRD-VSKDPELDQFMEAYCEML 55
Query: 251 CSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG----VSPGEGTGATMSDDDEDQVDSD 306
++E+L + ++ AME + IE L +T + E + +EDQ +S
Sbjct: 56 VKYREELTRPLQ-EAMEFMR---RIETQLNMITNGPVRIFTSEEKCEGVGSSEEDQDNSG 111
Query: 307 ANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRR 366
G E PD + P +R ELK+ L + Y + +++E+ +K++
Sbjct: 112 -----GETELPD------IDPRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKK 152
Query: 367 AGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
GKLP D L SWW+ H KWPYP+ S
Sbjct: 153 KGKLPKDARQKLLSWWELHYKWPYPSES 180
>gi|225425603|ref|XP_002263313.1| PREDICTED: homeobox protein knotted-1-like 6 [Vitis vinifera]
gi|297739081|emb|CBI28570.3| unnamed protein product [Vitis vinifera]
Length = 318
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 95/218 (43%), Gaps = 34/218 (15%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL--AQSQHVVSKYSALGAGQGLVT 234
KA+I SHP Y +LL A++ C ++ P P I L + ++ V K A+ G
Sbjct: 81 KAKIASHPCYPRLLEAYIDCQKVGAP----PEIACLLDEIRRENDVCKRDAVSTCLGA-- 134
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D ELD+FM Y +L +K L + EA +IE L +L +
Sbjct: 135 -DPELDEFMETYCDMLEKYKSDLARPFD----EATTFLNKIEMQLGNLCN------DASI 183
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
S DE V SD + F G E + G QELK L + + +I
Sbjct: 184 RSLPDEAVVSSDED-FSGGEEVQEAQPRGE--------------DQELKERLLRRFGGRI 228
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 229 SSLKLEFSKKKKKGKLPKEARQTLLEWWNLHYKWPYPT 266
>gi|66865829|gb|AAY57562.1| knotted 1-type homeobox protein 8 [Zea mays]
Length = 194
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 101/214 (47%), Gaps = 36/214 (16%)
Query: 182 SHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT---DDKE 238
+HP Y LL+A++ C ++ P D R+ A A ++ ++ + +G T DD E
Sbjct: 1 AHPQYSALLAAYLDCQKVGAPPDVSDRLSAMAAA--NLDAQPGPISRRRGPTTTRADDPE 58
Query: 239 LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDD 298
LDQFM Y +L F E++ + ++ EA +E+ L G+T+SD
Sbjct: 59 LDQFMEAYCNMLVKFHEEMARPIQ----EATEFFNSMERQL------------GSTISDS 102
Query: 299 DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIR 358
+ + S + D S P E + ++ ELKH+L + Y + +R
Sbjct: 103 NCEVAGSSEDEQDAS------------CPEEIDPCAEDK---ELKHQLLRKYGGYLGGLR 147
Query: 359 EEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+E ++++ GKLP + L WW+ H KWPYP+
Sbjct: 148 QEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 181
>gi|297722585|ref|NP_001173656.1| Os03g0772100 [Oryza sativa Japonica Group]
gi|108711301|gb|ABF99096.1| KNOX1 domain containing protein [Oryza sativa Japonica Group]
gi|255674932|dbj|BAH92384.1| Os03g0772100 [Oryza sativa Japonica Group]
Length = 385
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 47/225 (20%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS----KYSALGAG 229
A KAEI+SHP Y LL+A++ C ++ P D L ++ A A Q + +
Sbjct: 79 AAMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPR 138
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
+ D +LDQFM V+ A A + Q L S+ S E
Sbjct: 139 RDDDVPDHQLDQFMH-------------ADEVQGGAGAADPGSRGVLQ-LDSIAD-SNCE 183
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTG+ S++++D +A D S ++LKH+L
Sbjct: 184 GTGS--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMK 216
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH-SKWPYPTV 393
Y + D+R+ ++ + GKLP + L WW+ H KWPYP+V
Sbjct: 217 YGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSV 261
>gi|147810349|emb|CAN60889.1| hypothetical protein VITISV_041259 [Vitis vinifera]
Length = 328
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 95/217 (43%), Gaps = 22/217 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
+A+I +HPLY +LL A++ C ++ P P + A L + S+ A + D
Sbjct: 81 RAKIATHPLYPKLLHAYIECQKVGAP----PEV-AYLLEEIRRGSELCRRXAVSTCLGAD 135
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE-GTGATM 295
ELD+FM Y +L +K L + A + M ++ + L + V P T
Sbjct: 136 PELDEFMETYCDILVKYKSDLARPFD-EATASYMIAYK-KHDLLAHVKVKPAHVSREKTH 193
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
++E S+ +L G +E + L QELK +L + Y I
Sbjct: 194 MKNNEAAGSSEEDLSGGEVE--------------VQECLQTTENQELKDKLLRKYSGYIS 239
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E + ++ GKLP + L WW H KWPYPT
Sbjct: 240 TLKHEFSKTKKKGKLPKEARQALLDWWNIHYKWPYPT 276
>gi|255084752|ref|XP_002504807.1| knox-like protein [Micromonas sp. RCC299]
gi|226520076|gb|ACO66065.1| knox-like protein [Micromonas sp. RCC299]
Length = 470
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 106/246 (43%), Gaps = 27/246 (10%)
Query: 167 GVVNWQNARYKAEILSHPLYEQLLSAHVACLRI---ATPVDQLPRIDAQLAQSQHVVSKY 223
GV++ + +A + ++P Y +LL A+ AC R+ AT L R QL + VS
Sbjct: 164 GVLDDERGAMRAAVRANPRYPKLLDAYFACRRVGADATSKASLARRRRQLLREATEVSCG 223
Query: 224 SALGAGQGLVTD-DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWE-------- 274
+ A V ELD+FM + L ++ E+L E AC E
Sbjct: 224 TMRAALDACVRRYGAELDEFMDNVTDELTAYAEELGACFD----EVDAACREAEARVAAT 279
Query: 275 -------IEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIP 327
+ S ++ VS + + E + DSD GS E +
Sbjct: 280 AAKKLNALNVSAKTSRPVSTAAKKSVKVEPNAERESDSDTG---GSDEDEASAWVRRRRR 336
Query: 328 TESERSLMERVRQE-LKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHS 386
++ S + R++ L+ LK+ Y I+ +++E L+K + GKLP T LK WW ++
Sbjct: 337 KAAKESKIPDTREDDLRKSLKRKYASSILALKDEFLKKTKKGKLPSSATKTLKEWWLANL 396
Query: 387 KWPYPT 392
WPYP+
Sbjct: 397 LWPYPS 402
>gi|4887608|dbj|BAA77817.1| HOS3 [Oryza sativa Japonica Group]
Length = 355
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 92 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRHDARD- 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT-- 294
ELDQFM Y +L ++E+L + + AME + +E L ++ G + G G G+
Sbjct: 144 PELDQFMEAYCNMLAKYREELTRPID-EAMEFLK---RVESQLDTIAGGAHGGGAGSARL 199
Query: 295 -MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
++D + V S + D S + P I +E +ELK +L + Y
Sbjct: 200 LLADGKSECVGSSEDDMDPSGRENEP----PEIDPRAED-------KELKFQLLKKYSGY 248
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 249 LSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>gi|115470439|ref|NP_001058818.1| Os07g0129700 [Oryza sativa Japonica Group]
gi|75099746|sp|O80416.1|KNOSC_ORYSJ RecName: Full=Homeobox protein knotted-1-like 12; AltName:
Full=Homeobox protein HOS3; AltName: Full=Homeobox
protein OSH15; AltName: Full=Homeobox protein
knotted-1-like 3; Short=Oskn3
gi|221272020|sp|O65034.2|KNOSC_ORYSI RecName: Full=Homeobox protein knotted-1-like 12; AltName:
Full=Homeobox protein HOS3; AltName: Full=Homeobox
protein OSH15; AltName: Full=Homeobox protein
knotted-1-like 3; Short=Oskn3
gi|3327240|dbj|BAA31688.1| OSH15 [Oryza sativa Japonica Group]
gi|34395067|dbj|BAC84729.1| homeobox gene [Oryza sativa Japonica Group]
gi|113610354|dbj|BAF20732.1| Os07g0129700 [Oryza sativa Japonica Group]
gi|218199032|gb|EEC81459.1| hypothetical protein OsI_24763 [Oryza sativa Indica Group]
gi|222636372|gb|EEE66504.1| hypothetical protein OsJ_22961 [Oryza sativa Japonica Group]
gi|284431778|gb|ADB84630.1| homeobox protein [Oryza sativa Japonica Group]
Length = 355
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 108/219 (49%), Gaps = 26/219 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 92 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT-- 294
ELDQFM Y +L ++E+L + + AME + +E L ++ G + G G G+
Sbjct: 144 PELDQFMEAYCNMLAKYREELTRPID-EAMEFLK---RVESQLDTIAGGAHGGGAGSARL 199
Query: 295 -MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
++D + V S + D S + P I +E +ELK +L + Y
Sbjct: 200 LLADGKSECVGSSEDDMDPSGRENEP----PEIDPRAED-------KELKFQLLKKYSGY 248
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 249 LSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 287
>gi|449516639|ref|XP_004165354.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
6-like [Cucumis sativus]
Length = 324
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/217 (29%), Positives = 97/217 (44%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y +LL A++ C ++ P P I A L + S A + D
Sbjct: 83 KAKISSHPTYPRLLDAYIDCQKVGAP----PEI-AHLLEGIRQESDLCNRHAVTTCLGVD 137
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA-TM 295
ELD+FM Y +L +K L++ EA +IE L +L GA +
Sbjct: 138 PELDEFMETYCDMLVKYKSDLKRPFD----EATTFLNKIELQLSNLC-------NGAFSR 186
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
S D+ V SD L G +E ++ E++ R +LK +L + + I
Sbjct: 187 SLSDDGAVSSDEELSGGEME---------VVEAEAQTKGENR---DLKDKLLRRFGSHIS 234
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E + ++ GKLP + L WW H KWPYPT
Sbjct: 235 TLKLEFSKXKKKGKLPKEARQTLFEWWNVHYKWPYPT 271
>gi|60476416|gb|AAX21347.1| homeobox knotted-1-like protein KNOX3 [Lotus japonicus]
Length = 227
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 40/224 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD-----QLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA+I+SHP Y +LL A++ C ++ P + + R + L + V +++ A
Sbjct: 2 KAKIVSHPQYPRLLQAYIECQKVGAPPEIARLLEEIRRENDLCKRDVVSTRFGA------ 55
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ELD+FM Y +L +K L + EA +IE L +L T
Sbjct: 56 ----DPELDEFMESYCDMLVKYKSDLARPFD----EASNFLNKIEMQLSNLC-------T 100
Query: 292 GATM-SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
GA++ + DE V SD G + D G + E +ELK L + +
Sbjct: 101 GASVPTLSDEGGVSSDEEFSTGDGDAQD----GQQLRGED---------RELKDRLLRKF 147
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
I ++ E +K++ GKLP + L WW H KWPYPT S
Sbjct: 148 GSHIGTLKLEFSKKKKKGKLPKEARQTLLQWWNVHYKWPYPTES 191
>gi|449435396|ref|XP_004135481.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
Length = 316
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/217 (30%), Positives = 98/217 (45%), Gaps = 29/217 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y +LL A++ C ++ P P I A L + S A + D
Sbjct: 83 KAKISSHPTYPRLLDAYIDCQKVGAP----PEI-AHLLEGIRQESDLCNRHAVTTCLGVD 137
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGA-TM 295
ELD+FM Y +L +K L++ EA +IE L +L GA +
Sbjct: 138 PELDEFMETYCDMLVKYKSDLKRPFD----EATTFLNKIELQLSNLC-------NGAFSR 186
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
S D+ V SD L G +E ++ E++ R +LK +L + + I
Sbjct: 187 SLSDDGAVSSDEELSGGEME---------VVEAEAQTKGENR---DLKDKLLRRFGSHIS 234
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 235 TLKLEFSKKKKKGKLPKEARQTLFEWWNVHYKWPYPT 271
>gi|11463937|dbj|BAB18582.1| CRKNOX1 [Ceratopteris richardii]
Length = 512
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 27/226 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD- 235
+++I+SHP Y +L+ A+V C +I P P + L + + KY + + T
Sbjct: 214 RSKIMSHPTYPRLVMAYVNCHKIGAP----PEVATSL---EEISKKYQSFRSSSPAPTGA 266
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
D ELD FM Y +L + ++L Q + EA+ +IE L +L+ +GT +
Sbjct: 267 DPELDNFMETYCNVLQKYHDELMQPYK----EAMTFFRKIELQLNALS-----KGT-VRL 316
Query: 296 SDDDEDQVDSDAN-----LFDGSLEGPDTMGFGPLIPTESE--RSLMERVR--QELKHEL 346
+D+ D++ N L G G + G + E + +++ + Q++K +L
Sbjct: 317 CHTGDDKADANCNSGQHGLISGGSSGEEDAEEGDVSCGEVDFHEEMIDPLADDQKVKEQL 376
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y I +++E L+K++ GKLP + L WW H KWPYP+
Sbjct: 377 LRKYSGYIYKLKQEFLKKKKKGKLPKNAREKLLDWWNQHYKWPYPS 422
>gi|356506915|ref|XP_003522219.1| PREDICTED: homeobox protein knotted-1-like 2-like isoform 2
[Glycine max]
Length = 353
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 98/223 (43%), Gaps = 31/223 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+ HP Y LL ++ C ++ P P + A+ A + D
Sbjct: 102 KAKIIDHPHYSNLLQVYMDCQKVGAP----PEVAARFATVKENFEARQRSLVRSMETCKD 157
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM Y +L ++E+L + + EA IE L +L + E G++ S
Sbjct: 158 PELDQFMEAYYDMLVKYREELTRPIE----EAKDFMQRIESQLNTLCNGT-WENIGSS-S 211
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
++D+D + L + + D +ELK L + Y +
Sbjct: 212 EEDKDNSGRETELIEIDPQAED---------------------RELKSHLLKKYSGYLGT 250
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 251 LKKELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 293
>gi|350535485|ref|NP_001233941.1| homeobox protein knotted-1-like LET6 [Solanum lycopersicum]
gi|6016221|sp|O22299.1|LET6_SOLLC RecName: Full=Homeobox protein knotted-1-like LET6
gi|2529701|gb|AAC49917.1| class I knotted-like homeodomain protein [Solanum lycopersicum]
Length = 355
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 106/222 (47%), Gaps = 40/222 (18%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LL+A++ C +I P + + R++ A S + S+ G G + +D LD
Sbjct: 101 MAHPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGI--IGEDPALD 158
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--------GEGTG 292
QFM Y +L ++++L + + EA++ IE ++LT ++P GE
Sbjct: 159 QFMEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMD 213
Query: 293 ATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKE 352
S D+E VD + + D P +R ELK +L + Y
Sbjct: 214 RNGSSDEE--VDVNNSFID---------------PQAEDR--------ELKGQLLRKYSG 248
Query: 353 KIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 249 YLGSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSES 290
>gi|356567652|ref|XP_003552031.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 1
[Glycine max]
Length = 320
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 95/223 (42%), Gaps = 46/223 (20%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD-----QLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA+I SHP Y +LL A++ C ++ P + + R + + Q VVS + +GA
Sbjct: 85 KAKIASHPHYPRLLQAYIECQKVGAPPELTCLLEEIRRENDVRQRDVVVS--TCVGA--- 139
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT--GVSPGE 289
D ELD+FM Y +L +K L + EA +IE L L GVS
Sbjct: 140 ----DPELDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDLCSRGVS--- 188
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
G S++ D D DG L D +ELK L +
Sbjct: 189 NDGGVSSEEGFSAGDGDPQ--DGQLRSED---------------------RELKDRLLRR 225
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + ++ E +K++ GKLP D L WW H KWPYPT
Sbjct: 226 FGSHVGSLKLEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPT 268
>gi|303283021|ref|XP_003060802.1| knox-like protein [Micromonas pusilla CCMP1545]
gi|226458273|gb|EEH55571.1| knox-like protein [Micromonas pusilla CCMP1545]
Length = 338
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+L+ LK+ Y I +R+E LRKR+ GKLP D T LK WW + WPYP+
Sbjct: 220 DLRKSLKRKYATSISSLRDEFLRKRKKGKLPTDATEALKKWWSDNVVWPYPS 271
>gi|221272024|sp|Q10EC6.2|KNOS9_ORYSJ RecName: Full=Homeobox protein knotted-1-like 9
gi|222625876|gb|EEE60008.1| hypothetical protein OsJ_12750 [Oryza sativa Japonica Group]
Length = 347
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 98/231 (42%), Gaps = 48/231 (20%)
Query: 174 ARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVS----KYSALGAG 229
A KAEI+SHP Y LL+A++ C ++ P D L ++ A A Q + +
Sbjct: 79 AAMKAEIMSHPQYSALLAAYLGCKKVGAPPDVLTKLTAVPAAQQQLDAADGHPRRRHEPR 138
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
+ D +LDQFM V+ A A + Q L S+ S E
Sbjct: 139 RDDDVPDHQLDQFMH-------------ADEVQGGAGAADPGSRGVLQ-LDSIAD-SNCE 183
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
GTG+ S++++D +A D S ++LKH+L
Sbjct: 184 GTGS--SEEEQDTSCPEAEEIDPS-------------------------DKQLKHQLLMK 216
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH-SKWPYPT-VSPVTL 398
Y + D+R+ ++ + GKLP + L WW+ H KWPYP+ V +TL
Sbjct: 217 YGGSLGDLRQAFSKRTKKGKLPKEARLKLLHWWELHYDKWPYPSEVEKMTL 267
>gi|1814234|gb|AAB41849.1| POTH1 [Solanum tuberosum]
Length = 345
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 94/216 (43%), Gaps = 40/216 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y +LL+A++ C ++ P + ++ Q+ +++ G D
Sbjct: 117 KAKIVSHPYYPKLLNAYIDCQKVGAPAGIVNLLEEIRQQTDFRKPNATSICIGA-----D 171
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K L + EA +IE L +L + G S
Sbjct: 172 PELDEFMETYCDILLKYKSDLSRPFD----EATTFLNKIEMQLGNLC-----KDDGGVSS 222
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D++ ++DA+ M ELK L + + +
Sbjct: 223 DEELSCGEADAS--------------------------MRSEDNELKDRLLRKFGSHLSS 256
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + +L +WW H +WPYPT
Sbjct: 257 LKLEFSKKKKKGKLPKEARQMLLAWWDDHFRWPYPT 292
>gi|2935575|gb|AAC32818.1| KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 357
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 29/222 (13%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 91 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 142
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT-- 294
ELDQFM Y +L ++E+L + + AME + +E L ++ G G G
Sbjct: 143 PELDQFMEAYCNMLAKYREELTRPID-EAMEFLK---RVESQLDTIAGGGHGGSGGGAGS 198
Query: 295 ----MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
++D + V S + D S + P I +E +ELK +L + Y
Sbjct: 199 ARLLLADGKSECVGSSEDDMDPSGRENEP----PEIDPRAED-------KELKFQLLKKY 247
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E +K++ GKLP + L WW+ H KWPYP+
Sbjct: 248 SGYLSSLRQEFSKKKKKGKLPKEARQKLLHWWELHYKWPYPS 289
>gi|127709419|gb|ABO28750.1| knotted1-like homeobox transcription factor [Prunus persica]
gi|289655992|gb|ADD14044.1| class 1 KNOTTED-like transcription factor KNOPE2 [Prunus persica]
Length = 351
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 95/228 (41%), Gaps = 37/228 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG----- 231
KA+I SHP Y +L+ A++ C ++ P + +D +S K G+
Sbjct: 97 KAKIASHPTYPRLIHAYIECQKVGAPPEIASFLDEIRRESDFYNYKQQQRGSCNSNSSMS 156
Query: 232 --LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE 289
+ D ELD+FM Y +L +K L + EA +IE L +L S
Sbjct: 157 STYLGADPELDEFMETYCEMLVKYKSDLSRPFD----EATTFLNKIELQLSNLCTSSANA 212
Query: 290 GTGATMSDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
+ T+SD+ DED + + +G G D ++LK
Sbjct: 213 SSIRTLSDEGGASSDEDFSGGEIEVQEGQQRGDD---------------------RDLKD 251
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + + I ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 252 RLMRRFGSHIGTLKLEFSKKKKKGKLPKEARQTLFDWWSVHYKWPYPT 299
>gi|336112107|gb|AEI17372.1| Knox-like protein 1 [Arabidopsis lyrata]
Length = 388
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 101/219 (46%), Gaps = 39/219 (17%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL----AQSQHVVSKYSALGAGQGL 232
KA+I++HP Y LL A++ C +I P + + RI A A+ Q SA
Sbjct: 131 KAKIIAHPHYSTLLQAYLDCQKIGAPPEVVDRITAARQDFEARQQRPTPSVSA------- 183
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV------S 286
+ D ELDQFM Y +L ++E+L + ++ AME + IE L L +
Sbjct: 184 SSRDPELDQFMEAYCDMLVKYREELTRPIQ-EAMEFIR---RIESQLIMLCQSPIHILNN 239
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
P +G M DE+Q N G E P+ + P +R ELK+ L
Sbjct: 240 PADGKSEGMGSSDEEQ----ENTSGGETELPE------IDPRAEDR--------ELKNHL 281
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSH 385
+ Y + +++E+ +K++ GKLP + L +WW+ H
Sbjct: 282 LKKYSGYLSSLKQELSKKKKKGKLPKEARQKLLTWWELH 320
>gi|356526781|ref|XP_003531995.1| PREDICTED: homeobox protein knotted-1-like 6-like [Glycine max]
Length = 317
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ--SQHVVSKYSALGAGQGLVT 234
KA+I SHP Y +LL A++ C ++ P P I L + ++ V K + + V
Sbjct: 78 KAKIASHPHYPRLLQAYIDCQKVGAP----PEIACLLEEIRRENDVCKRDVVVST--CVE 131
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
D ELD+FM Y +L +K L + EA +IE L L S + T
Sbjct: 132 ADPELDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDLCSGS----SLLT 183
Query: 295 MSDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
+SDD +E D + DG L D +ELK L +
Sbjct: 184 LSDDGGVSSEEGFSAGDGDPQDGQLRSED---------------------RELKDRLLRK 222
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ I ++ E +K++ GKLP D L WW H KWPYPT
Sbjct: 223 FGSHIGYLKLEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPT 265
>gi|356567654|ref|XP_003552032.1| PREDICTED: homeobox protein knotted-1-like 6-like isoform 2
[Glycine max]
Length = 324
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 96/226 (42%), Gaps = 48/226 (21%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVD-----QLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA+I SHP Y +LL A++ C ++ P + + R + + Q VVS + +GA
Sbjct: 85 KAKIASHPHYPRLLQAYIECQKVGAPPELTCLLEEIRRENDVRQRDVVVS--TCVGA--- 139
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGT 291
D ELD+FM Y +L +K L + EA +IE L L S +
Sbjct: 140 ----DPELDEFMETYCDMLVKYKSDLTRPFD----EATTFLNKIETQLTDLCSRS----S 187
Query: 292 GATMSDD-----DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
T+ DD +E D + DG L D +ELK L
Sbjct: 188 LPTLYDDGGVSSEEGFSAGDGDPQDGQLRSED---------------------RELKDRL 226
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + + ++ E +K++ GKLP D L WW H KWPYPT
Sbjct: 227 LRRFGSHVGSLKLEFSKKKKRGKLPKDARQTLLQWWNIHYKWPYPT 272
>gi|73918025|gb|AAZ93629.1| class 1 Knotted 1-like protein [Eschscholzia californica]
Length = 227
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 41/214 (19%)
Query: 189 LLSAHVACLRIATPVDQLPRIDAQLAQS--QHVVSKYSALGAGQGLVTDDKELDQFMTHY 246
LL A++ C ++ P P + + L Q+ + V + S++ G LV+ D ELDQFM Y
Sbjct: 3 LLQAYIDCQKVGAP----PEVVSWLTQARQEFVERQKSSVNCGDKLVSADPELDQFMEAY 58
Query: 247 VLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--------GEGTGATMSDD 298
+L ++E+L ++ AME + +IE L +L P EG G++
Sbjct: 59 YDMLVKYREELTGPLQ-EAMEFMR---KIEAQLNTLCINGPIRVFTDEKCEGAGSS---- 110
Query: 299 DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIR 358
+E Q +S G E P+ + P +R ELK+ L + Y + ++
Sbjct: 111 EEGQENSA-----GETELPE------IDPRAEDR--------ELKNHLLKKYSGYLSSLK 151
Query: 359 EEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+E+ +K++ GKLP D L +WW+SH KWPYP+
Sbjct: 152 KELSKKKKKGKLPKDARQKLLNWWESHYKWPYPS 185
>gi|55669507|gb|AAV54621.1| homeobox transcription factor KN4 [Picea mariana]
Length = 438
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 100/218 (45%), Gaps = 28/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I HP Y QLL+A++ C +I P + + +D +++Q + + + G D
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATMDIGV-----D 242
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGEGTGATM 295
ELDQFM Y +L + +L + + EA ++E L L+ G +G
Sbjct: 243 PELDQFMEAYCQMLIKYHLELSKPFK----EARTFLNKMETQLNCLSKGAIRSFPSG--Y 296
Query: 296 SDDDEDQVDSDANLFD-GSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
D+ ED S F G +E + + P +R ELK +L + Y
Sbjct: 297 CDEREDGGGSSEEEFSCGEIEVHE------VDPRAEDR--------ELKDQLLRKYSGYF 342
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E L+K++ GKLP + L WW H KWPYP+
Sbjct: 343 SSLKQEFLKKKKKGKLPKEARQKLLEWWNVHYKWPYPS 380
>gi|224121810|ref|XP_002318678.1| predicted protein [Populus trichocarpa]
gi|222859351|gb|EEE96898.1| predicted protein [Populus trichocarpa]
Length = 266
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 24/223 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATP------VDQLPRIDAQLAQSQHVVSKYSALGAGQ 230
+A+I SHPLY +LL A++ C ++ P +D++ ++ S V+ S LGA
Sbjct: 12 RAKIASHPLYPKLLEAYIDCQKVGAPPEMAYLLDEIRLVNDVSKGSNDTVA--SCLGA-- 67
Query: 231 GLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-GVSPGE 289
D ELD+FM Y +L +K L + EA +IE +L G S +
Sbjct: 68 -----DPELDEFMETYCDVLMKYKADLSRPFD----EATTFLNDIEAQFNTLCNGPSRSQ 118
Query: 290 GTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQG 349
G +S + S + D G G +S R +R ELK +L +
Sbjct: 119 VYGLPLSLSLSILLLSMLSNEAAGSSDEDASG-GEAGMQDSTRINEDR---ELKDKLLRK 174
Query: 350 YKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y I ++ ++++ GKLP + +L +WW H+KWPYPT
Sbjct: 175 YSGYISTLKHAFSKQKKKGKLPKEARQILLNWWNIHNKWPYPT 217
>gi|3327269|dbj|BAA31698.1| PKn1 [Ipomoea nil]
Length = 333
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 93/216 (43%), Gaps = 35/216 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y +LL A++ C ++ P P I + L + + + DD
Sbjct: 101 KAKIASHPSYPKLLEAYIDCQKVGAP----PEIASFLDEIRRENDLFKHDSRVSTCFGDD 156
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD FM Y +L +K L + EA +IE L +L +S
Sbjct: 157 PELDIFMETYCDILVKYKSDLSRPFD----EAKTFLNKIETQLSNLCKDD------GVVS 206
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
DD++ +A D +++G D +ELK L Q Y I
Sbjct: 207 SDDDEYSGGEAEEQDSAVKGED---------------------RELKSRLLQKYGGHISS 245
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP D +L WW+ H +WPYPT
Sbjct: 246 LKLEFSKKKKKGKLPKDARQILLEWWKGHYRWPYPT 281
>gi|4098240|gb|AAD00251.1| knotted 2 protein [Solanum lycopersicum]
Length = 354
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 104/220 (47%), Gaps = 40/220 (18%)
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
+P Y +LL+A++ C +I P + + R++ A S + S+ G G + +D LDQF
Sbjct: 102 NPHYHRLLTAYLNCQKIGAPPEVVARLEEICATSATMGRSSSSSGGGI--IGEDPALDQF 159
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP--------GEGTGAT 294
M Y +L ++++L + + EA++ IE ++LT ++P GE
Sbjct: 160 MEAYCEMLTKYEQELSKPFK----EAMVFLSRIECQFKALT-LAPNSSHESALGEAMDRN 214
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
S D+E VD + + D P +R ELK +L + Y +
Sbjct: 215 GSSDEE--VDVNNSFID---------------PQAEDR--------ELKGQLLRKYSGYL 249
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 250 GSLKQEFMKKRKKGKLPKEARQQLVDWWLRHIKWPYPSES 289
>gi|449450628|ref|XP_004143064.1| PREDICTED: homeobox protein knotted-1-like 6-like [Cucumis sativus]
Length = 319
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 95/224 (42%), Gaps = 45/224 (20%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQL--------AQSQHVVSKYSALGA 228
KA+I+SHP Y +LL A++ C ++ P P + L +Q Q+ +S + GA
Sbjct: 79 KAKIVSHPTYPRLLHAYIDCQKVGAP----PEVACLLEEIRRENDSQEQNGIS--TCFGA 132
Query: 229 GQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPG 288
D ELD+FM Y +L +K L + EA I+ L +L
Sbjct: 133 -------DPELDEFMEAYCDMLVKYKSDLSRPFH----EAFSFLNNIQLQLCNLGA---- 177
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
+T + +ED + SD L G E D M + LK L
Sbjct: 178 --PASTSTPSNEDAMSSDDELNCGERELQDGQ--------------MRLEDKGLKDMLLS 221
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ I ++ E +K++ GKLP + VL WW H KWPYPT
Sbjct: 222 RFGGHIGTLKLEFSKKKKKGKLPKEGRKVLLEWWDVHYKWPYPT 265
>gi|329757145|gb|AEC04752.1| knotted-like homeobox KNOX3 [Fragaria vesca]
Length = 360
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 48/228 (21%)
Query: 175 RYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT 234
R K +++SHPL+ +LL+++V C ++ P + + R++ A S + SA
Sbjct: 92 RMKTKVMSHPLFPRLLASYVNCQKVGAPAEVVARLEDAAAASISSSAALSAACEES---E 148
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP------- 287
D ELDQFM Y +L + E+L + EA++ +I L++L+ VSP
Sbjct: 149 PDPELDQFMEAYCEMLTKYHEELTKPFH----EAMLGLSKINSQLKALS-VSPSYSASTG 203
Query: 288 ---GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKH 344
G+G + + +E+ +D A +D ++
Sbjct: 204 DLVGQGGSSEEAGVNENCIDPRAKDWD------------------------------IRA 233
Query: 345 ELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+L Q Y + + +E+ +K++ GKLP + L+ WW + WPYP+
Sbjct: 234 KLLQKYGGSLGSLSQELKKKKKNGKLPKEARVQLQEWWSRNYTWPYPS 281
>gi|357115636|ref|XP_003559594.1| PREDICTED: homeobox protein knotted-1-like 4-like [Brachypodium
distachyon]
Length = 313
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 96/225 (42%), Gaps = 49/225 (21%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTD- 235
KA+I+SHPLY LL + + C ++ P Q VV + AL AG+ L +D
Sbjct: 53 KAKIMSHPLYPALLRSFIECQKVGAP--------------QEVVGRLCAL-AGE-LESDC 96
Query: 236 --------DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP 287
D ELD+FM Y +L +K++L + ++ EA +IE + S T
Sbjct: 97 GDQRQDSLDAELDEFMETYCHVLVRYKQELTRPIQ----EADQFFRDIEAQMDSFTLDD- 151
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
D + + +A DG P I ++ ELK L
Sbjct: 152 ---NSGGGDDGSSEDDEQEAGHADGL----------PEITSQCAED------NELKSHLL 192
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + + ++ +K++ GKLP D L WWQ H +WPYP+
Sbjct: 193 SKYSGYLTSLWRDLSKKKKKGKLPRDARQKLLHWWQLHYRWPYPS 237
>gi|33333535|gb|AAQ11884.1| knotted 4 [Hordeum vulgare]
Length = 136
Score = 58.2 bits (139), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 35/53 (66%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELKH+L + Y + +R+E ++R+ GKLP + L WW+ HSKWPYP+
Sbjct: 24 KELKHQLLRKYGGYVGSLRQEFCKRRKKGKLPKEARQKLLHWWELHSKWPYPS 76
>gi|161105475|gb|ABR26245.2| transcription factor STM1 [Euphorbia esula]
Length = 217
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 82/171 (47%), Gaps = 24/171 (14%)
Query: 126 ANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARY--------- 176
+++S+ + S N N NN ST S ++++ + N A Y
Sbjct: 58 SSNSLFLPLPSPHPPNQEHHNRNNTSTTGGSSSMILDDHNNTNSNSNTACYFMDTNTSTT 117
Query: 177 ---KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG-AGQGL 232
KA+I++HP Y +LL+A++ C ++ P P I A+L + + + +G +G
Sbjct: 118 ASVKAKIMAHPHYHRLLAAYINCQKVGAP----PEIAARL---EEACASAATMGPSGTSC 170
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
+ +D LDQFM Y +L ++++L + + EA++ +E ++LT
Sbjct: 171 LGEDPALDQFMEAYCEMLTKYEQELFKPFK----EAMLFLQRVESQFKALT 217
>gi|73918027|gb|AAZ93630.1| transcription factor Knat6 [Eschscholzia californica]
Length = 228
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 189 LLSAHVACLRIATPVD---QLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTH 245
LL A++ C ++ P++ L I + S+ V + LG DD ELD FM
Sbjct: 3 LLQAYIDCQKVGAPMEIACLLDEIRQENDTSKRTVVSTTCLG-------DDPELDNFMET 55
Query: 246 YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDS 305
Y +L +K L + EA +I+ L +L ++ S + D++
Sbjct: 56 YCDILVRYKSDLSRPFN----EATTFLNKIQMQLSNLCNNKSSSNRISSASAANSDEIV- 110
Query: 306 DANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKR 365
GS E D + G + E + L +R E+K +L + Y I +++E +K+
Sbjct: 111 ------GSSE--DDLSGGEIEVQEVQPRLEDR---EMKDKLLRKYSGYISSLKQEFSKKK 159
Query: 366 RAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ GKLP D +L WW H+KWPYPT
Sbjct: 160 KKGKLPKDARQILFDWWNVHNKWPYPT 186
>gi|302791343|ref|XP_002977438.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300154808|gb|EFJ21442.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 313
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKEL 239
I HP Y++LL AH+ C ++ D ++D + + + + +++G D EL
Sbjct: 75 ISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRKREFESAVKTSIGV-------DPEL 127
Query: 240 DQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD 299
DQFM Y +L +++ +L++ + EA+ C + E L S+ VS S ++
Sbjct: 128 DQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVS---NIDVLSSAEN 179
Query: 300 EDQVDSDANLFDGSLEGPDTMGFGP----LIPTESERSLMERVRQELKHELKQGYKEKIV 355
ED ++ ++ +E ++ G G L P ++ ELK L + Y I
Sbjct: 180 EDASET----YEDFMEEAESGGIGEVDTDLDPLAGDK--------ELKKVLMKRYGGYIK 227
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYP 391
+ +E L+K++ GKLP ++ L WW H PYP
Sbjct: 228 GLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 263
>gi|371767748|gb|AEX56229.1| knotted-like 1 protein [Orchis italica]
Length = 134
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 43/151 (28%), Positives = 70/151 (46%), Gaps = 22/151 (14%)
Query: 243 MTHYVLLLCSFKEQLQQHVRVHA-----MEAVMACWEIEQSLQSLTGVSPGEGTGATMSD 297
M Y +L ++E++ + V+ A E+ ++C +S+ S + + E GA SD
Sbjct: 1 MEVYCGILVKYREEIARPVKEAAEFLREAESQLSCIVGGRSICSFSSTADDEKCGAAYSD 60
Query: 298 DDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDI 357
E G L P++ G T E + R ELK++L + Y I +
Sbjct: 61 SQE-----------GLLLDPNSAG-----ETVMEDKIWAEDR-ELKNQLLRKYNGYIGTL 103
Query: 358 REEILRKRRAGKLPGDTTSVLKSWWQSHSKW 388
R E+ +KR+ GKLP + L WW+ H+KW
Sbjct: 104 RRELSKKRKMGKLPKEARQKLLGWWEFHNKW 134
>gi|147798326|emb|CAN74528.1| hypothetical protein VITISV_031345 [Vitis vinifera]
Length = 214
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A +V G + +D
Sbjct: 93 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASEAAMVR------TGTSCIGED 146
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
LDQFM Y +L ++++L + + EA++ +E ++LT S G
Sbjct: 147 PALDQFMEAYCEMLTKYEQELSKPFK----EAMLFLSRVECQFKALTVSSSDSG 196
>gi|302786494|ref|XP_002975018.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300157177|gb|EFJ23803.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 312
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKEL 239
I HP Y++LL AH+ C ++ D ++D + + + + +++G D EL
Sbjct: 74 ISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRKREFESAVKTSIGV-------DPEL 126
Query: 240 DQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD 299
DQFM Y +L +++ +L++ + EA+ C + E L S+ VS S ++
Sbjct: 127 DQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVS---NIDVLSSAEN 178
Query: 300 EDQVDSDANLFDGSLEGPDTMGFGP----LIPTESERSLMERVRQELKHELKQGYKEKIV 355
ED ++ ++ +E ++ G G L P ++ ELK L + Y I
Sbjct: 179 EDASET----YEDFMEEAESGGIGEVDTDLDPLAGDK--------ELKKVLMKRYGGYIK 226
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYP 391
+ +E L+K++ GKLP ++ L WW H PYP
Sbjct: 227 GLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 262
>gi|302786492|ref|XP_002975017.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
gi|300157176|gb|EFJ23802.1| hypothetical protein SELMODRAFT_415291 [Selaginella moellendorffii]
Length = 336
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 102/229 (44%), Gaps = 33/229 (14%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKEL 239
I HP Y++LL AH+ C ++ D ++D + + + + +++G D EL
Sbjct: 74 ISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRKREFESAVKTSIGV-------DPEL 126
Query: 240 DQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD 299
DQFM Y +L +++ +L++ + EA+ C + E L S+ VS + +S
Sbjct: 127 DQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQL-SVIAVSNID----VLSSGR 177
Query: 300 EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVR-----------------QEL 342
E QV +A +F+ + G +E+ ME +EL
Sbjct: 178 ETQVPCNAKVFNPDEQIFTETGAENEDASETYEDFMEEAESGGIGEVDTDLDPLAGDKEL 237
Query: 343 KHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYP 391
K L + Y I + +E L+K++ GKLP ++ L WW H PYP
Sbjct: 238 KKVLMKRYGGYIKGLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 286
>gi|380746849|gb|AFE48355.1| shootmeristemless-like homeodomain protein, partial [Cuscuta
pentagona]
Length = 210
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 31/161 (19%)
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT----GVSPGEGTGA 293
ELDQFM Y +L ++++L + + EA++ IE L+SL+ SPGEG
Sbjct: 2 ELDQFMEAYCEMLSKYEQELSKPFK----EAMLFLSRIESQLKSLSLPSSFDSPGEGVER 57
Query: 294 TMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEK 353
+S ++E ++ + D +E +ELK +L + Y
Sbjct: 58 NVSSEEEVDHNNAGSFIDPQVED-----------------------RELKGQLLRKYSGY 94
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+ +++E ++KR+ GKLP + L WW H KWPYP+ S
Sbjct: 95 LGSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPSES 135
>gi|168831390|gb|ACA34976.1| KNOX1, partial [Streptocarpus glandulosissimus]
Length = 220
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 93/210 (44%), Gaps = 36/210 (17%)
Query: 192 AHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGL-VTDDKELDQFMTHYVLLL 250
A++ C ++ P P + A+L +H G V+ D ELDQFM Y +L
Sbjct: 1 AYLDCQKVGAP----PEVVARLTAIRHEFEARQRAGGAAARDVSKDPELDQFMEAYYDML 56
Query: 251 CSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV------SPGEGTGATMSDDDEDQVD 304
++E+L + ++ AME + IE L +T S + G S++D++
Sbjct: 57 VKYREELSRPLQ-EAMEFMR---RIESQLNMITNCPVRILNSEEKCEGVVSSEEDQENSG 112
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
+ L + D +ELK+ L + Y + +++E+ +K
Sbjct: 113 GETELAEIDPRAED---------------------KELKNHLLRKYSGYLSSLKQELSKK 151
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
++ GKLP D L SWW+ H KWPYP+ S
Sbjct: 152 KKKGKLPKDARQKLLSWWELHYKWPYPSES 181
>gi|329757143|gb|AEC04751.1| knotted-like homeobox KNOX2 [Fragaria vesca]
Length = 432
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 57/106 (53%), Gaps = 7/106 (6%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C R+ P + + R+ A Q V++ + + + + D
Sbjct: 117 KAKIIAHPHYSNLLQAYMDCQRVGAPSEVVARLS---AARQEFVARQRSSVSSRDASSKD 173
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSL 282
ELDQFM Y +L ++E+L + ++ EA+ +IE L L
Sbjct: 174 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMKKIETQLNML 215
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLL 399
+ELK+ L + Y + +++E+ +K++ GKLP D L SWW+ H KWPYP+ S L
Sbjct: 312 RELKNHLLRKYSGYLSSLKQELSKKKKKGKLPKDARQKLLSWWELHYKWPYPSESEKVAL 371
>gi|167859843|gb|ACA04875.1| KNOTTED1-like homeodomain protein 2 [Picea abies]
Length = 319
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 109/247 (44%), Gaps = 40/247 (16%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 40 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 99
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 100 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 144
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 145 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 198
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT-----------GVSPGEGT 291
M Y + ++E+L + + EA+ +IE L +LT G G+G
Sbjct: 199 MEAYCEMFIKYQEELTKPFK----EAMAFLKKIENQLGALTKGTIRTSSLDQGYERGDGA 254
Query: 292 GATMSDD 298
++ +D
Sbjct: 255 ASSEEED 261
>gi|371767730|gb|AEX56220.1| knotted-like 2 protein [Gymnadenia odoratissima]
Length = 162
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 93 ELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 144
>gi|371767720|gb|AEX56215.1| knotted-like 3 protein [Gymnadenia conopsea]
Length = 142
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 73 ELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 124
>gi|371767692|gb|AEX56202.1| knotted-like 5 protein [Gymnadenia conopsea]
Length = 162
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L++ Y + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 93 ELKEMLRKKYSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 144
>gi|11181645|gb|AAG32676.1| homeobox protein [Physcomitrella patens]
Length = 30
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ GKLP TT+VLK+WWQ+HSKWPYPT
Sbjct: 3 KKKGKLPEGTTTVLKAWWQAHSKWPYPT 30
>gi|302791345|ref|XP_002977439.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
gi|300154809|gb|EFJ21443.1| hypothetical protein SELMODRAFT_451276 [Selaginella moellendorffii]
Length = 307
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 99/216 (45%), Gaps = 25/216 (11%)
Query: 180 ILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKEL 239
I HP Y++LL AH+ C ++ D ++D + + + + +++G D EL
Sbjct: 63 ISGHPQYKELLRAHMNCYKVGASADLAAQMDELVRKREFESAVKTSIGV-------DPEL 115
Query: 240 DQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDD 299
DQFM Y +L +++ +L++ + EA+ C + E L + + +
Sbjct: 116 DQFMVAYCNVLNAYEIELRRTFK----EAIEFCKKQEHQLSVIARKIIIIASSGSSRSSA 171
Query: 300 EDQVDSDANLFDGSLEGPDTMGFGP----LIPTESERSLMERVRQELKHELKQGYKEKIV 355
E++ S+ ++ +E ++ G G L P ++ ELK L + Y I
Sbjct: 172 ENEDASET--YEDFMEEAESGGIGEVDTDLDPLAGDK--------ELKKVLMKRYGGYIK 221
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYP 391
+ +E L+K++ GKLP ++ L WW H PYP
Sbjct: 222 GLTQEYLKKKKKGKLPKESRQQLLDWWSQHQDHPYP 257
>gi|58011287|gb|AAW62518.1| KNOTTED1-like protein [Selaginella kraussiana]
Length = 315
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 94/218 (43%), Gaps = 27/218 (12%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRID--AQLAQSQHVVSKYSALGAGQGLVT 234
KA I HP Y +L+ AH++ ++ ++ I+ ++ Q S ++ +GA
Sbjct: 70 KAAISGHPQYLELIKAHMSIKKVGASSQKVAEINEVIRMHQDSQPSSVHTNIGA------ 123
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGAT 294
+ ELDQFM Y +L ++ QL + A+ C + EQ L+ VS +
Sbjct: 124 -NPELDQFMVAYCDVLNMYENQLNKAF----TGAIEYCKQQEQELKL---VSVSDEPIDA 175
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+S + D D + D PLI +E+K L + Y +
Sbjct: 176 LSSVELDDDVEDDEEAESDDVAADGGDIDPLIGD-----------KEIKRALMKKYGGYL 224
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +E L+K++ KLP T L+ WW H + PYP+
Sbjct: 225 GGLTQEYLKKKKKSKLPSAATKTLRDWWFQHLEHPYPS 262
>gi|108710858|gb|ABF98653.1| Homeobox protein OSH1, putative, expressed [Oryza sativa Japonica
Group]
Length = 242
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 94/200 (47%), Gaps = 27/200 (13%)
Query: 195 ACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFK 254
L++ P + R+ A +AQ + + +ALG G T+ ELDQFM Y +L ++
Sbjct: 4 GGLQVGAPPEVAARLTA-VAQDLELRQR-TALGV-LGAATE-PELDQFMEAYHEMLVKYR 59
Query: 255 EQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSL 314
E+L + ++ EA+ +E L +L+ + +EDQ S G
Sbjct: 60 EELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSSGSSEEDQEGSG-----GET 110
Query: 315 EGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDT 374
E P+ G V QELKH L + Y + +++E+ +K++ GKLP D
Sbjct: 111 ELPEIDAHG--------------VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDA 156
Query: 375 TSVLKSWWQSHSKWPYPTVS 394
L +WW+ H KWPYP+ S
Sbjct: 157 RQQLLNWWELHYKWPYPSES 176
>gi|82911902|gb|ABB95090.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911910|gb|ABB95094.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911916|gb|ABB95097.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911950|gb|ABB95114.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911964|gb|ABB95121.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912010|gb|ABB95144.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912026|gb|ABB95152.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912028|gb|ABB95153.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912046|gb|ABB95162.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912066|gb|ABB95172.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912070|gb|ABB95174.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912078|gb|ABB95178.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912132|gb|ABB95205.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912138|gb|ABB95208.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912206|gb|ABB95242.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912216|gb|ABB95247.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912224|gb|ABB95251.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912240|gb|ABB95259.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912266|gb|ABB95272.1| homeobox transcription factor KN3 [Picea glauca]
Length = 285
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 29/199 (14%)
Query: 65 AAHFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVI 120
A HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 110 AGHFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPS 169
Query: 121 DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI 180
VTP S+ + A + + + +M+++ + E AD + KA+I
Sbjct: 170 FVVTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKI 214
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRID--AQLAQSQHVVSKYSALGAGQGLVTDDKE 238
++H Y +L++A++ C ++ P D + +D +Q +Q V+ S +GA D E
Sbjct: 215 IAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATIS-IGA-------DPE 266
Query: 239 LDQFMTHYVLLLCSFKEQL 257
LDQFM Y + ++E+L
Sbjct: 267 LDQFMEAYCEMFIKYQEEL 285
>gi|82912058|gb|ABB95168.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912074|gb|ABB95176.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912236|gb|ABB95257.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 92/199 (46%), Gaps = 29/199 (14%)
Query: 65 AAHFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVI 120
A HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 109 AGHFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPS 168
Query: 121 DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI 180
VTP S+ + A + + + +M+++ + E AD + KA+I
Sbjct: 169 FVVTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKI 213
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRID--AQLAQSQHVVSKYSALGAGQGLVTDDKE 238
++H Y +L++A++ C ++ P D + +D +Q +Q V+ S +GA D E
Sbjct: 214 IAHVHYPRLVAAYIDCQKVGAPPDVVSELDELSQKCHAQQCVATIS-IGA-------DPE 265
Query: 239 LDQFMTHYVLLLCSFKEQL 257
LDQFM Y + ++E+L
Sbjct: 266 LDQFMEAYCEMFIKYQEEL 284
>gi|82912052|gb|ABB95165.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 90/197 (45%), Gaps = 25/197 (12%)
Query: 65 AAHFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVI 120
A HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 109 AGHFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPS 168
Query: 121 DDVTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEI 180
VTP S+ + A + + + +M+++ + E AD + KA+I
Sbjct: 169 FVVTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKI 213
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELD
Sbjct: 214 IAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELD 267
Query: 241 QFMTHYVLLLCSFKEQL 257
QFM Y + ++E+L
Sbjct: 268 QFMEAYCEMFIKYQEEL 284
>gi|82912192|gb|ABB95235.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912198|gb|ABB95238.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+N+ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDNSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|350535222|ref|NP_001233927.1| knotted 3 protein [Solanum lycopersicum]
gi|4098242|gb|AAD00252.1| knotted 3 protein [Solanum lycopersicum]
Length = 320
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 84/216 (38%), Gaps = 40/216 (18%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+ILSHP Y +LL+A++ C ++ P + ++ Q+ + L G D
Sbjct: 91 KAKILSHPYYPKLLNAYIDCQKVGAPASIVNLLEEIRQQNDFRKPNATCLCIGA-----D 145
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELD+FM Y +L +K L + EA IE L +L E
Sbjct: 146 PELDEFMETYCDILLKYKSDLSRPFD----EATTFLNNIEMQLGNLCKDDDEEEEEELSC 201
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVD 356
D + S+ ELK L + + +
Sbjct: 202 GD-------------------------------ASSSMRRSEDNELKDRLLRKFGSHLSS 230
Query: 357 IREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
++ E +K++ GKLP + +L +WW H +WPY T
Sbjct: 231 LKLEFSKKKKKGKLPKEAREMLLAWWYDHFRWPYST 266
>gi|60476414|gb|AAX21346.1| homeobox knotted-1-like protein KNOX2 [Lotus japonicus]
Length = 243
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 24/199 (12%)
Query: 196 CLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKE 255
C +I P P + A+L ++ + D ELDQFM Y +L ++E
Sbjct: 3 CQKIGAP----PEVVARLVAARQEFEARRRSSVSSRENSKDPELDQFMEAYYDMLVKYRE 58
Query: 256 QLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANLFDGSLE 315
+L + ++ EA+ IE L L G +DD + V S S E
Sbjct: 59 ELTRPIQ----EAMGFMRRIETQLNMLCS-----GPVRIFNDDKCEGVGS-------SEE 102
Query: 316 GPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTT 375
D G +P R+ +ELK L + Y + +++E+ K++ GKLP D
Sbjct: 103 DQDNSGGETELPEIDPRA----EDRELKTHLLKKYSGYLSSLKQELSEKKKKGKLPKDAR 158
Query: 376 SVLKSWWQSHSKWPYPTVS 394
L +WW+ H KWPYP+ S
Sbjct: 159 QKLLNWWELHYKWPYPSES 177
>gi|15667619|dbj|BAB68310.1| transcription factor OSH3 [Oryza sativa Indica Group]
Length = 365
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS------LTGVSPGEG 290
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESK 188
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
G SDDDE + S + +E + G + P +++L K L + Y
Sbjct: 189 AGLDSSDDDEHEDGSGMEM----MEAAEDEDLGIIDPRSDDKAL--------KRHLLRKY 236
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E+ +KR+ GKLP + L +WW+ H +WPYP+
Sbjct: 237 SGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPS 278
>gi|82911252|gb|ABB94771.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911452|gb|ABB94871.1| homeobox transcription factor KN2 [Picea glauca]
Length = 247
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+IL+HP Y LL A++ C +I P + + R+DA + ++ ++G D
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTNEYENQHRTTVSIGM-------D 226
Query: 237 KELDQFMTHYVLLLCSFKEQL 257
ELDQFM Y +L + E+L
Sbjct: 227 PELDQFMEAYCEMLTKYHEEL 247
>gi|356499245|ref|XP_003518452.1| PREDICTED: homeobox protein SHOOT MERISTEMLESS-like [Glycine max]
Length = 261
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 62/112 (55%), Gaps = 16/112 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGA-----GQG 231
+ +I++HPL+ +LLS+++ CL++ P P + A L +S +KY + A G G
Sbjct: 69 RDKIMAHPLFPRLLSSYLNCLKVGAP----PEVVASLEES---YAKYESFNASSGRIGGG 121
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
+ +D LDQFM Y +L ++++L + + EA++ IE L++L
Sbjct: 122 SIGEDPALDQFMEAYCEMLIKYEQELTKPFK----EAMLFFSRIECQLKALA 169
>gi|148536339|gb|ABQ85722.1| shoot meristemless-like protein, partial [Populus nigra]
Length = 93
Score = 51.2 bits (121), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A + + A G + +D
Sbjct: 16 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------ANTGCIGED 69
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
LDQFM Y +L ++++L +
Sbjct: 70 PALDQFMEAYCEMLTKYEQELSK 92
>gi|218193684|gb|EEC76111.1| hypothetical protein OsI_13373 [Oryza sativa Indica Group]
Length = 357
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
+ ELDQFM Y +L ++E+L + ++ EA+ +E L +L+ +
Sbjct: 136 EPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSS 191
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 192 GSSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLS 232
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP D L +WW+ H KWPYP+
Sbjct: 233 SLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPS 269
>gi|222625719|gb|EEE59851.1| hypothetical protein OsJ_12427 [Oryza sativa Japonica Group]
Length = 355
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 74/157 (47%), Gaps = 23/157 (14%)
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATM 295
+ ELDQFM Y +L ++E+L + ++ EA+ +E L +L+ +
Sbjct: 134 EPELDQFMEAYHEMLVKYREELTRPLQ----EAMEFLRRVETQLNTLSISGRSLRNILSS 189
Query: 296 SDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
+EDQ S G E P+ G V QELKH L + Y +
Sbjct: 190 GSSEEDQEGSG-----GETELPEIDAHG--------------VDQELKHHLLKKYSGYLS 230
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E+ +K++ GKLP D L +WW+ H KWPYP+
Sbjct: 231 SLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPS 267
>gi|148536335|gb|ABQ85720.1| shoot meristemless-like protein, partial [Populus deltoides]
gi|148536337|gb|ABQ85721.1| shoot meristemless-like protein, partial [Populus maximowiczii]
gi|148536341|gb|ABQ85723.1| shoot meristemless-like protein, partial [Populus trichocarpa]
Length = 92
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A + + A G + +D
Sbjct: 15 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------ANTGCIGED 68
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
LDQFM Y +L ++++L +
Sbjct: 69 PALDQFMEAYCEMLTKYEQELSK 91
>gi|3462614|gb|AAC33009.1| knotted I class homeodomain protein [Pisum sativum]
Length = 251
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL A++ C +I P + + R+ A+ + + S++ + + + D
Sbjct: 117 KAKIIAHPQYSSLLQAYMDCQKIGAPPEAVARMVE--ARQEFEARQRSSVNSRES--SKD 172
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTG----VSP---GE 289
ELDQFM Y +L ++E+L + ++ EA+ IE L L + P E
Sbjct: 173 PELDQFMEAYYDMLVKYREELTRPIQ----EAMDFMRRIETQLNMLCNGPLRIFPDDKNE 228
Query: 290 GTGATMSDDDEDQVDSD 306
G G++ + + ++D
Sbjct: 229 GVGSSEEEQENSGGETD 245
>gi|371767712|gb|AEX56211.1| knotted-like 4 protein [Dactylorhiza incarnata]
Length = 138
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L++ + + +++E L+ + GK+P D S L WW SH +WPYPT
Sbjct: 69 ELKEMLRKKHSGYLSSLKKEFLKTTKKGKIPRDARSTLLVWWNSHYQWPYPT 120
>gi|82908152|gb|ABB93265.1| homeobox transcription factor KN2 [Picea abies]
gi|82908154|gb|ABB93266.1| homeobox transcription factor KN2 [Picea abies]
gi|82908156|gb|ABB93267.1| homeobox transcription factor KN2 [Picea abies]
gi|82908158|gb|ABB93268.1| homeobox transcription factor KN2 [Picea abies]
gi|82908160|gb|ABB93269.1| homeobox transcription factor KN2 [Picea abies]
gi|82908164|gb|ABB93271.1| homeobox transcription factor KN2 [Picea abies]
gi|82908166|gb|ABB93272.1| homeobox transcription factor KN2 [Picea abies]
gi|82908168|gb|ABB93273.1| homeobox transcription factor KN2 [Picea abies]
gi|82908172|gb|ABB93275.1| homeobox transcription factor KN2 [Picea abies]
gi|82908176|gb|ABB93277.1| homeobox transcription factor KN2 [Picea abies]
gi|82908178|gb|ABB93278.1| homeobox transcription factor KN2 [Picea abies]
gi|82908186|gb|ABB93282.1| homeobox transcription factor KN2 [Picea abies]
gi|82908188|gb|ABB93283.1| homeobox transcription factor KN2 [Picea abies]
gi|82908192|gb|ABB93285.1| homeobox transcription factor KN2 [Picea abies]
gi|82908194|gb|ABB93286.1| homeobox transcription factor KN2 [Picea abies]
gi|82908200|gb|ABB93289.1| homeobox transcription factor KN2 [Picea abies]
gi|82908202|gb|ABB93290.1| homeobox transcription factor KN2 [Picea abies]
gi|82908208|gb|ABB93293.1| homeobox transcription factor KN2 [Picea abies]
gi|82908210|gb|ABB93294.1| homeobox transcription factor KN2 [Picea abies]
gi|82908214|gb|ABB93296.1| homeobox transcription factor KN2 [Picea abies]
gi|82908222|gb|ABB93300.1| homeobox transcription factor KN2 [Picea abies]
gi|82908230|gb|ABB93304.1| homeobox transcription factor KN2 [Picea abies]
gi|82908234|gb|ABB93306.1| homeobox transcription factor KN2 [Picea abies]
gi|82908236|gb|ABB93307.1| homeobox transcription factor KN2 [Picea abies]
gi|82908238|gb|ABB93308.1| homeobox transcription factor KN2 [Picea abies]
gi|82908240|gb|ABB93309.1| homeobox transcription factor KN2 [Picea abies]
gi|82908242|gb|ABB93310.1| homeobox transcription factor KN2 [Picea abies]
gi|82911152|gb|ABB94721.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911156|gb|ABB94723.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911166|gb|ABB94728.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911172|gb|ABB94731.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911174|gb|ABB94732.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911182|gb|ABB94736.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911186|gb|ABB94738.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911192|gb|ABB94741.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911194|gb|ABB94742.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911220|gb|ABB94755.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911234|gb|ABB94762.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911240|gb|ABB94765.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911242|gb|ABB94766.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911244|gb|ABB94767.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911248|gb|ABB94769.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911250|gb|ABB94770.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911254|gb|ABB94772.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911256|gb|ABB94773.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911258|gb|ABB94774.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911264|gb|ABB94777.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911266|gb|ABB94778.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911276|gb|ABB94783.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911280|gb|ABB94785.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911284|gb|ABB94787.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911296|gb|ABB94793.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911298|gb|ABB94794.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911300|gb|ABB94795.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911302|gb|ABB94796.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911306|gb|ABB94798.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911312|gb|ABB94801.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911324|gb|ABB94807.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911326|gb|ABB94808.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911340|gb|ABB94815.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911342|gb|ABB94816.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911352|gb|ABB94821.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911354|gb|ABB94822.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911358|gb|ABB94824.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911362|gb|ABB94826.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911372|gb|ABB94831.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911380|gb|ABB94835.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911412|gb|ABB94851.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911414|gb|ABB94852.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911428|gb|ABB94859.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911430|gb|ABB94860.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911440|gb|ABB94865.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911454|gb|ABB94872.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911466|gb|ABB94878.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911470|gb|ABB94880.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911474|gb|ABB94882.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911476|gb|ABB94883.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911482|gb|ABB94886.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911484|gb|ABB94887.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911488|gb|ABB94889.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911492|gb|ABB94891.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911502|gb|ABB94896.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTNEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82911392|gb|ABB94841.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTNEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82911136|gb|ABB94713.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTNEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82908162|gb|ABB93270.1| homeobox transcription factor KN2 [Picea abies]
gi|82908170|gb|ABB93274.1| homeobox transcription factor KN2 [Picea abies]
gi|82908184|gb|ABB93281.1| homeobox transcription factor KN2 [Picea abies]
gi|82908224|gb|ABB93301.1| homeobox transcription factor KN2 [Picea abies]
gi|82908226|gb|ABB93302.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALSNEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82908336|gb|ABB93357.1| homeobox transcription factor KN3 [Picea abies]
gi|82908338|gb|ABB93358.1| homeobox transcription factor KN3 [Picea abies]
gi|82908342|gb|ABB93360.1| homeobox transcription factor KN3 [Picea abies]
gi|82908344|gb|ABB93361.1| homeobox transcription factor KN3 [Picea abies]
gi|82908346|gb|ABB93362.1| homeobox transcription factor KN3 [Picea abies]
gi|82908348|gb|ABB93363.1| homeobox transcription factor KN3 [Picea abies]
gi|82908350|gb|ABB93364.1| homeobox transcription factor KN3 [Picea abies]
gi|82908352|gb|ABB93365.1| homeobox transcription factor KN3 [Picea abies]
gi|82908354|gb|ABB93366.1| homeobox transcription factor KN3 [Picea abies]
gi|82908356|gb|ABB93367.1| homeobox transcription factor KN3 [Picea abies]
gi|82908360|gb|ABB93369.1| homeobox transcription factor KN3 [Picea abies]
gi|82908362|gb|ABB93370.1| homeobox transcription factor KN3 [Picea abies]
gi|82908364|gb|ABB93371.1| homeobox transcription factor KN3 [Picea abies]
gi|82908366|gb|ABB93372.1| homeobox transcription factor KN3 [Picea abies]
gi|82908368|gb|ABB93373.1| homeobox transcription factor KN3 [Picea abies]
gi|82908370|gb|ABB93374.1| homeobox transcription factor KN3 [Picea abies]
gi|82908372|gb|ABB93375.1| homeobox transcription factor KN3 [Picea abies]
gi|82908374|gb|ABB93376.1| homeobox transcription factor KN3 [Picea abies]
gi|82908376|gb|ABB93377.1| homeobox transcription factor KN3 [Picea abies]
gi|82908378|gb|ABB93378.1| homeobox transcription factor KN3 [Picea abies]
gi|82908380|gb|ABB93379.1| homeobox transcription factor KN3 [Picea abies]
gi|82908382|gb|ABB93380.1| homeobox transcription factor KN3 [Picea abies]
gi|82908384|gb|ABB93381.1| homeobox transcription factor KN3 [Picea abies]
gi|82908386|gb|ABB93382.1| homeobox transcription factor KN3 [Picea abies]
gi|82908388|gb|ABB93383.1| homeobox transcription factor KN3 [Picea abies]
gi|82908390|gb|ABB93384.1| homeobox transcription factor KN3 [Picea abies]
gi|82908394|gb|ABB93386.1| homeobox transcription factor KN3 [Picea abies]
gi|82908396|gb|ABB93387.1| homeobox transcription factor KN3 [Picea abies]
gi|82908398|gb|ABB93388.1| homeobox transcription factor KN3 [Picea abies]
gi|82908400|gb|ABB93389.1| homeobox transcription factor KN3 [Picea abies]
gi|82908402|gb|ABB93390.1| homeobox transcription factor KN3 [Picea abies]
gi|82908404|gb|ABB93391.1| homeobox transcription factor KN3 [Picea abies]
gi|82908406|gb|ABB93392.1| homeobox transcription factor KN3 [Picea abies]
gi|82908408|gb|ABB93393.1| homeobox transcription factor KN3 [Picea abies]
gi|82908410|gb|ABB93394.1| homeobox transcription factor KN3 [Picea abies]
gi|82908412|gb|ABB93395.1| homeobox transcription factor KN3 [Picea abies]
gi|82908416|gb|ABB93397.1| homeobox transcription factor KN3 [Picea abies]
gi|82908418|gb|ABB93398.1| homeobox transcription factor KN3 [Picea abies]
gi|82908420|gb|ABB93399.1| homeobox transcription factor KN3 [Picea abies]
gi|82908422|gb|ABB93400.1| homeobox transcription factor KN3 [Picea abies]
gi|82908424|gb|ABB93401.1| homeobox transcription factor KN3 [Picea abies]
gi|82908426|gb|ABB93402.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|82911468|gb|ABB94879.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82911202|gb|ABB94746.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|55669485|gb|AAV54610.1| homeobox transcription factor KN2 [Picea glauca]
gi|82908174|gb|ABB93276.1| homeobox transcription factor KN2 [Picea abies]
gi|82908182|gb|ABB93280.1| homeobox transcription factor KN2 [Picea abies]
gi|82908190|gb|ABB93284.1| homeobox transcription factor KN2 [Picea abies]
gi|82908196|gb|ABB93287.1| homeobox transcription factor KN2 [Picea abies]
gi|82908198|gb|ABB93288.1| homeobox transcription factor KN2 [Picea abies]
gi|82908204|gb|ABB93291.1| homeobox transcription factor KN2 [Picea abies]
gi|82908206|gb|ABB93292.1| homeobox transcription factor KN2 [Picea abies]
gi|82908212|gb|ABB93295.1| homeobox transcription factor KN2 [Picea abies]
gi|82908218|gb|ABB93298.1| homeobox transcription factor KN2 [Picea abies]
gi|82908220|gb|ABB93299.1| homeobox transcription factor KN2 [Picea abies]
gi|82908228|gb|ABB93303.1| homeobox transcription factor KN2 [Picea abies]
gi|82908232|gb|ABB93305.1| homeobox transcription factor KN2 [Picea abies]
gi|82909158|gb|ABB93749.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909160|gb|ABB93750.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909162|gb|ABB93751.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909164|gb|ABB93752.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909166|gb|ABB93753.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909168|gb|ABB93754.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909170|gb|ABB93755.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909172|gb|ABB93756.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909174|gb|ABB93757.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909176|gb|ABB93758.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909180|gb|ABB93760.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909182|gb|ABB93761.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909184|gb|ABB93762.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909186|gb|ABB93763.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909188|gb|ABB93764.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909190|gb|ABB93765.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909192|gb|ABB93766.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909194|gb|ABB93767.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909196|gb|ABB93768.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909198|gb|ABB93769.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909200|gb|ABB93770.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909202|gb|ABB93771.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909204|gb|ABB93772.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909206|gb|ABB93773.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909208|gb|ABB93774.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909210|gb|ABB93775.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909212|gb|ABB93776.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909214|gb|ABB93777.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909216|gb|ABB93778.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909218|gb|ABB93779.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909220|gb|ABB93780.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909224|gb|ABB93782.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909226|gb|ABB93783.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909228|gb|ABB93784.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909230|gb|ABB93785.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909232|gb|ABB93786.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909234|gb|ABB93787.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909236|gb|ABB93788.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909238|gb|ABB93789.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909240|gb|ABB93790.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909242|gb|ABB93791.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909244|gb|ABB93792.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909246|gb|ABB93793.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909248|gb|ABB93794.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909250|gb|ABB93795.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909252|gb|ABB93796.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909254|gb|ABB93797.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909256|gb|ABB93798.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909258|gb|ABB93799.1| homeobox transcription factor KN2 [Picea mariana]
gi|82909260|gb|ABB93800.1| homeobox transcription factor KN2 [Picea mariana]
gi|82911120|gb|ABB94705.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911122|gb|ABB94706.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911124|gb|ABB94707.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911126|gb|ABB94708.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911128|gb|ABB94709.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911130|gb|ABB94710.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911132|gb|ABB94711.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911134|gb|ABB94712.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911138|gb|ABB94714.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911140|gb|ABB94715.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911142|gb|ABB94716.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911144|gb|ABB94717.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911146|gb|ABB94718.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911148|gb|ABB94719.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911150|gb|ABB94720.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911154|gb|ABB94722.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911158|gb|ABB94724.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911160|gb|ABB94725.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911162|gb|ABB94726.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911164|gb|ABB94727.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911168|gb|ABB94729.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911170|gb|ABB94730.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911176|gb|ABB94733.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911180|gb|ABB94735.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911184|gb|ABB94737.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911188|gb|ABB94739.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911190|gb|ABB94740.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911196|gb|ABB94743.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911198|gb|ABB94744.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911200|gb|ABB94745.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911204|gb|ABB94747.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911206|gb|ABB94748.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911208|gb|ABB94749.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911210|gb|ABB94750.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911212|gb|ABB94751.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911214|gb|ABB94752.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911216|gb|ABB94753.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911218|gb|ABB94754.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911222|gb|ABB94756.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911224|gb|ABB94757.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911226|gb|ABB94758.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911228|gb|ABB94759.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911230|gb|ABB94760.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911232|gb|ABB94761.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911236|gb|ABB94763.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911238|gb|ABB94764.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911246|gb|ABB94768.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911260|gb|ABB94775.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911262|gb|ABB94776.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911268|gb|ABB94779.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911270|gb|ABB94780.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911272|gb|ABB94781.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911274|gb|ABB94782.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911278|gb|ABB94784.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911282|gb|ABB94786.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911286|gb|ABB94788.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911288|gb|ABB94789.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911290|gb|ABB94790.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911292|gb|ABB94791.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911294|gb|ABB94792.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911304|gb|ABB94797.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911308|gb|ABB94799.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911310|gb|ABB94800.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911314|gb|ABB94802.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911316|gb|ABB94803.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911318|gb|ABB94804.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911320|gb|ABB94805.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911322|gb|ABB94806.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911328|gb|ABB94809.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911330|gb|ABB94810.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911332|gb|ABB94811.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911336|gb|ABB94813.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911338|gb|ABB94814.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911344|gb|ABB94817.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911346|gb|ABB94818.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911348|gb|ABB94819.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911356|gb|ABB94823.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911360|gb|ABB94825.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911364|gb|ABB94827.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911366|gb|ABB94828.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911368|gb|ABB94829.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911370|gb|ABB94830.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911374|gb|ABB94832.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911376|gb|ABB94833.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911382|gb|ABB94836.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911384|gb|ABB94837.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911386|gb|ABB94838.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911388|gb|ABB94839.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911390|gb|ABB94840.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911394|gb|ABB94842.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911396|gb|ABB94843.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911398|gb|ABB94844.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911400|gb|ABB94845.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911402|gb|ABB94846.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911404|gb|ABB94847.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911406|gb|ABB94848.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911408|gb|ABB94849.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911410|gb|ABB94850.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911418|gb|ABB94854.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911420|gb|ABB94855.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911422|gb|ABB94856.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911424|gb|ABB94857.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911426|gb|ABB94858.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911432|gb|ABB94861.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911434|gb|ABB94862.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911436|gb|ABB94863.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911438|gb|ABB94864.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911442|gb|ABB94866.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911444|gb|ABB94867.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911446|gb|ABB94868.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911450|gb|ABB94870.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911456|gb|ABB94873.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911458|gb|ABB94874.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911460|gb|ABB94875.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911462|gb|ABB94876.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911464|gb|ABB94877.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911472|gb|ABB94881.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911478|gb|ABB94884.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911480|gb|ABB94885.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911486|gb|ABB94888.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911490|gb|ABB94890.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911494|gb|ABB94892.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911498|gb|ABB94894.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911500|gb|ABB94895.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82908392|gb|ABB93385.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|82908414|gb|ABB93396.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|82911178|gb|ABB94734.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911378|gb|ABB94834.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911496|gb|ABB94893.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82909178|gb|ABB93759.1| homeobox transcription factor KN2 [Picea mariana]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82911990|gb|ABB95134.1| homeobox transcription factor KN3 [Picea glauca]
Length = 285
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 112 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 171
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 172 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 216
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 217 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 270
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 271 MEAYCEMFIKYQEEL 285
>gi|55669489|gb|AAV54612.1| homeobox transcription factor KN3 [Picea glauca]
gi|55669491|gb|AAV54613.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909366|gb|ABB93853.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909368|gb|ABB93854.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909370|gb|ABB93855.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909372|gb|ABB93856.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909374|gb|ABB93857.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909376|gb|ABB93858.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909378|gb|ABB93859.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909380|gb|ABB93860.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909384|gb|ABB93862.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909386|gb|ABB93863.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909388|gb|ABB93864.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909390|gb|ABB93865.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909394|gb|ABB93867.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909396|gb|ABB93868.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909398|gb|ABB93869.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909400|gb|ABB93870.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909402|gb|ABB93871.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909404|gb|ABB93872.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909408|gb|ABB93874.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909410|gb|ABB93875.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909412|gb|ABB93876.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909414|gb|ABB93877.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909416|gb|ABB93878.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909420|gb|ABB93880.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909422|gb|ABB93881.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909424|gb|ABB93882.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909426|gb|ABB93883.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909428|gb|ABB93884.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909430|gb|ABB93885.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909432|gb|ABB93886.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909434|gb|ABB93887.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909436|gb|ABB93888.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909438|gb|ABB93889.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909440|gb|ABB93890.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909442|gb|ABB93891.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909444|gb|ABB93892.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909446|gb|ABB93893.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909448|gb|ABB93894.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909450|gb|ABB93895.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909452|gb|ABB93896.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909454|gb|ABB93897.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909456|gb|ABB93898.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909458|gb|ABB93899.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909460|gb|ABB93900.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909462|gb|ABB93901.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909464|gb|ABB93902.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909466|gb|ABB93903.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909468|gb|ABB93904.1| homeobox transcription factor KN3 [Picea mariana]
gi|82911900|gb|ABB95089.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911904|gb|ABB95091.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911906|gb|ABB95092.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911908|gb|ABB95093.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911912|gb|ABB95095.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911914|gb|ABB95096.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911918|gb|ABB95098.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911920|gb|ABB95099.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911922|gb|ABB95100.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911924|gb|ABB95101.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911926|gb|ABB95102.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911928|gb|ABB95103.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911930|gb|ABB95104.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911932|gb|ABB95105.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911934|gb|ABB95106.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911936|gb|ABB95107.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911938|gb|ABB95108.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911940|gb|ABB95109.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911942|gb|ABB95110.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911944|gb|ABB95111.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911946|gb|ABB95112.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911948|gb|ABB95113.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911952|gb|ABB95115.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911954|gb|ABB95116.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911956|gb|ABB95117.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911958|gb|ABB95118.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911960|gb|ABB95119.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911962|gb|ABB95120.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911966|gb|ABB95122.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911968|gb|ABB95123.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911970|gb|ABB95124.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911972|gb|ABB95125.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911974|gb|ABB95126.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911978|gb|ABB95128.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911980|gb|ABB95129.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911982|gb|ABB95130.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911984|gb|ABB95131.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911986|gb|ABB95132.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911988|gb|ABB95133.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911992|gb|ABB95135.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911994|gb|ABB95136.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911996|gb|ABB95137.1| homeobox transcription factor KN3 [Picea glauca]
gi|82911998|gb|ABB95138.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912000|gb|ABB95139.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912002|gb|ABB95140.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912004|gb|ABB95141.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912006|gb|ABB95142.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912008|gb|ABB95143.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912012|gb|ABB95145.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912014|gb|ABB95146.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912018|gb|ABB95148.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912020|gb|ABB95149.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912022|gb|ABB95150.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912024|gb|ABB95151.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912030|gb|ABB95154.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912032|gb|ABB95155.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912034|gb|ABB95156.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912036|gb|ABB95157.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912038|gb|ABB95158.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912040|gb|ABB95159.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912042|gb|ABB95160.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912044|gb|ABB95161.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912048|gb|ABB95163.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912050|gb|ABB95164.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912054|gb|ABB95166.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912062|gb|ABB95170.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912064|gb|ABB95171.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912068|gb|ABB95173.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912072|gb|ABB95175.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912076|gb|ABB95177.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912080|gb|ABB95179.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912082|gb|ABB95180.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912084|gb|ABB95181.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912086|gb|ABB95182.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912088|gb|ABB95183.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912090|gb|ABB95184.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912092|gb|ABB95185.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912094|gb|ABB95186.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912096|gb|ABB95187.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912098|gb|ABB95188.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912100|gb|ABB95189.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912102|gb|ABB95190.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912104|gb|ABB95191.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912106|gb|ABB95192.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912108|gb|ABB95193.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912110|gb|ABB95194.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912112|gb|ABB95195.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912114|gb|ABB95196.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912116|gb|ABB95197.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912118|gb|ABB95198.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912120|gb|ABB95199.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912122|gb|ABB95200.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912124|gb|ABB95201.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912126|gb|ABB95202.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912128|gb|ABB95203.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912130|gb|ABB95204.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912134|gb|ABB95206.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912136|gb|ABB95207.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912140|gb|ABB95209.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912142|gb|ABB95210.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912144|gb|ABB95211.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912146|gb|ABB95212.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912148|gb|ABB95213.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912150|gb|ABB95214.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912152|gb|ABB95215.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912154|gb|ABB95216.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912156|gb|ABB95217.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912158|gb|ABB95218.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912160|gb|ABB95219.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912162|gb|ABB95220.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912164|gb|ABB95221.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912166|gb|ABB95222.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912168|gb|ABB95223.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912170|gb|ABB95224.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912172|gb|ABB95225.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912174|gb|ABB95226.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912176|gb|ABB95227.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912178|gb|ABB95228.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912180|gb|ABB95229.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912182|gb|ABB95230.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912184|gb|ABB95231.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912186|gb|ABB95232.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912188|gb|ABB95233.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912190|gb|ABB95234.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912194|gb|ABB95236.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912196|gb|ABB95237.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912200|gb|ABB95239.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912202|gb|ABB95240.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912204|gb|ABB95241.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912208|gb|ABB95243.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912210|gb|ABB95244.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912212|gb|ABB95245.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912214|gb|ABB95246.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912218|gb|ABB95248.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912220|gb|ABB95249.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912222|gb|ABB95250.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912226|gb|ABB95252.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912228|gb|ABB95253.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912230|gb|ABB95254.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912232|gb|ABB95255.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912234|gb|ABB95256.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912238|gb|ABB95258.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912242|gb|ABB95260.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912244|gb|ABB95261.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912246|gb|ABB95262.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912248|gb|ABB95263.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912250|gb|ABB95264.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912252|gb|ABB95265.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912254|gb|ABB95266.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912256|gb|ABB95267.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912258|gb|ABB95268.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912260|gb|ABB95269.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912262|gb|ABB95270.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912264|gb|ABB95271.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912268|gb|ABB95273.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912270|gb|ABB95274.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912272|gb|ABB95275.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912274|gb|ABB95276.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912276|gb|ABB95277.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912278|gb|ABB95278.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912280|gb|ABB95279.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912282|gb|ABB95280.1| homeobox transcription factor KN3 [Picea glauca]
Length = 284
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|82908180|gb|ABB93279.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|414872579|tpg|DAA51136.1| TPA: knotted homeobox3 [Zea mays]
Length = 193
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVT-D 235
KA+I+SHP Y +LL+A + C ++ P P ++A + AG T
Sbjct: 76 KAKIVSHPSYHRLLAAFLDCHKVGCP----PEAAEEIAAVAREREAWQRAAAGDVAHTRP 131
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEG 290
D ELDQFM Y LL ++KE+L + +R EA +E L S+T P G
Sbjct: 132 DPELDQFMESYCELLVTWKEELTRPLR----EAEEFLTTVEAQLNSITNTGPTMG 182
>gi|30348874|gb|AAP31413.1|AF457124_1 knotted1-like homeodomain protein liguleless3 [Zea mays]
Length = 115
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P + + L + VS+ AG G + D
Sbjct: 42 KAQIASHPRYPSLLSAYIECRKVGAH----PHVTSLLEE----VSRERRPDAGAGEIGVD 93
Query: 237 KELDQFMTHYVLLLCSFKEQL 257
ELD+FM Y +L +KE+L
Sbjct: 94 PELDEFMDAYCRVLVRYKEEL 114
>gi|19387168|gb|AAL87120.1| knotted class 1 homeodomain protein liguleless3 [Zea mays]
Length = 120
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I SHP Y LLSA++ C ++ P + + L + VS+ AG G + D
Sbjct: 42 KAQIASHPRYPSLLSAYIECRKVGAH----PHVTSLLEE----VSRERRPDAGAGEIGVD 93
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELD+FM Y +L +KE+L +
Sbjct: 94 PELDEFMDAYCRVLVRYKEELTR 116
>gi|82909382|gb|ABB93861.1| homeobox transcription factor KN3 [Picea mariana]
gi|82909418|gb|ABB93879.1| homeobox transcription factor KN3 [Picea mariana]
Length = 284
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTVVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|82911976|gb|ABB95127.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912056|gb|ABB95167.1| homeobox transcription factor KN3 [Picea glauca]
gi|82912060|gb|ABB95169.1| homeobox transcription factor KN3 [Picea glauca]
Length = 282
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 109 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 168
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 169 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 213
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 214 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 267
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 268 MEAYCEMFIKYQEEL 282
>gi|82909406|gb|ABB93873.1| homeobox transcription factor KN3 [Picea mariana]
gi|82912016|gb|ABB95147.1| homeobox transcription factor KN3 [Picea glauca]
Length = 286
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 113 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGTGVPGQFELIRRKEEGRCARAYAEPSFV 172
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 173 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 217
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 218 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 271
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 272 MEAYCEMFIKYQEEL 286
>gi|55669483|gb|AAV54609.1| homeobox transcription factor KN2 [Pinus strobus]
Length = 244
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++IL+HP Y LL A++ C +I P + R+DA L + S L G D
Sbjct: 170 KSKILAHPQYPSLLGAYIDCQKIGAPPEVAARLDA-LTREYENQQHRSTLSIGM-----D 223
Query: 237 KELDQFMTHYVLLLCSFKEQL 257
ELDQFM Y +L + E+L
Sbjct: 224 PELDQFMEAYCEMLTKYHEEL 244
>gi|82911350|gb|ABB94820.1| homeobox transcription factor KN2 [Picea glauca]
gi|82911448|gb|ABB94869.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA++L+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKVLAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|168058967|ref|XP_001781477.1| KNOX class 1 protein, MKN4 [Physcomitrella patens subsp. patens]
gi|162667114|gb|EDQ53752.1| KNOX class 1 protein, MKN4 [Physcomitrella patens subsp. patens]
Length = 614
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 86/231 (37%), Gaps = 42/231 (18%)
Query: 182 SHPLYEQLLSAHVACLRIATPVDQLPRID---AQLAQSQHVVSKYSALGAGQGLVTDDKE 238
S+P +E H RI P L ++D + + Q+ S ++ L + D
Sbjct: 366 SYPDHEISFVFH----RIGAPKGLLIKLDEMEKKFQRFQYGESSWNVLHVTK--FGQDPS 419
Query: 239 LDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDD 298
LD FM Y+ LL F+E L+ A ++E +P D
Sbjct: 420 LDFFMRSYIDLLTKFREDLENPYNKFAQYKDKVTKDLEDLCGHYIETTP----------D 469
Query: 299 DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV--- 355
+ED SD D S + D G E +LM E IV
Sbjct: 470 EEDNFGSDIGTKDMSQDLNDLEILG-------EENLM----------YTADIDESIVIDP 512
Query: 356 DIREEILRKR---RAGKLPGDTTSVLKSWWQSHSKWPYPTVSPVTLLLRFL 403
D +E L+K + GKLP + +LK W+ HS WPYP+ L R
Sbjct: 513 DAADEELKKMLRLKYGKLPTNARQILKDWFSRHSYWPYPSEMEKAYLQRLC 563
>gi|412988463|emb|CCO17799.1| predicted protein [Bathycoccus prasinos]
Length = 529
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 65/166 (39%), Gaps = 25/166 (15%)
Query: 238 ELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGV-------SP--- 287
EL+ FM H C + Q+ + E AC + ++ LT + SP
Sbjct: 303 ELNAFMEHS----CENARKFQKELTAIYDETDRACESFDAKMKELTLLESNNSKNSPNTI 358
Query: 288 -GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
TGA + +++ DG D F L + + +++L
Sbjct: 359 GATATGAASKKRKQGAEEAEKETVDGQDSDEDDRSF----------QLSMKSDEAFRNQL 408
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
YK+ I + EE L K+ GKLP + VLK +W WPYPT
Sbjct: 409 LAKYKDDIPALEEEWLNKKPKGKLPKEALIVLKQFWNKKICWPYPT 454
>gi|82911416|gb|ABB94853.1| homeobox transcription factor KN2 [Picea glauca]
Length = 248
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYSEMLTKYHEEL 248
>gi|82908358|gb|ABB93368.1| homeobox transcription factor KN3 [Picea abies]
Length = 284
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 89/195 (45%), Gaps = 25/195 (12%)
Query: 67 HFSDTNFLNLRTTANNNNSNNNNT--ASDSDASQTPNQW--LSRTSSSLLHRNHSDVIDD 122
HF F+ + ++++ ++ T S S + P Q+ + R R +++
Sbjct: 111 HFVMEQFIPEQAVISDSSISSVKTEVCSGSGGNGVPGQFELIRRKEEGRCARAYAEPSFV 170
Query: 123 VTPANDSIIAAVESADLKNANSENMNNASTNNKSEGVVVESGADGVVNWQNARYKAEILS 182
VTP S+ + A + + + +M+++ + E AD + KA+I++
Sbjct: 171 VTPLVTSLPPQQQEARMVTSLAVDMDSSCSCKPIE-------ADAM--------KAKIIA 215
Query: 183 HPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQF 242
H Y +L++A++ C ++ P D + +D +L+Q H + + G D ELDQF
Sbjct: 216 HVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----DPELDQF 269
Query: 243 MTHYVLLLCSFKEQL 257
M Y + ++E+L
Sbjct: 270 MEAYCEMFIKYQEEL 284
>gi|212723636|ref|NP_001131690.1| uncharacterized protein LOC100193050 [Zea mays]
gi|194692252|gb|ACF80210.1| unknown [Zea mays]
gi|414871975|tpg|DAA50532.1| TPA: putative knotted-like transcription factor family protein [Zea
mays]
Length = 207
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK+ L Y + + E+ RK++ GKLP D L WWQ H +WPYP+
Sbjct: 76 KELKNHLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 128
>gi|82910442|gb|ABB94373.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910478|gb|ABB94391.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910510|gb|ABB94407.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910564|gb|ABB94434.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910566|gb|ABB94435.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910708|gb|ABB94506.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82907970|gb|ABB93174.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|55669481|gb|AAV54608.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910338|gb|ABB94321.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910340|gb|ABB94322.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910348|gb|ABB94326.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910362|gb|ABB94333.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910364|gb|ABB94334.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910406|gb|ABB94355.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910440|gb|ABB94372.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910456|gb|ABB94380.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910508|gb|ABB94406.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910512|gb|ABB94408.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910518|gb|ABB94411.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910530|gb|ABB94417.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910580|gb|ABB94442.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910646|gb|ABB94475.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910654|gb|ABB94479.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82910690|gb|ABB94497.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910720|gb|ABB94512.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|255537924|ref|XP_002510027.1| homeobox protein knotted-1, putative [Ricinus communis]
gi|223550728|gb|EEF52214.1| homeobox protein knotted-1, putative [Ricinus communis]
Length = 259
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 39/203 (19%)
Query: 198 RIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSFKEQL 257
R+ P + + R+ A A+ + + S++ + L D ELDQFM Y +L ++E+L
Sbjct: 21 RVGAPPEVVARLVA--ARQEFESKQRSSVNSRDNL--KDPELDQFMEAYCDMLMKYREEL 76
Query: 258 QQHVRVHAMEAV--------MACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQVDSDANL 309
+ ++ AM+ + M C L+ EG G++ +EDQ +S
Sbjct: 77 TRPIQ-EAMDFMRRIETQLNMIC---NGPLRIFNSDEKSEGVGSS----EEDQDNSG--- 125
Query: 310 FDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK 369
G E P+ + P +R ELK+ L + Y + +++E+ +K++ GK
Sbjct: 126 --GETELPE------IDPRAEDR--------ELKNHLLRKYSGYLSSLKQELSKKKKKGK 169
Query: 370 LPGDTTSVLKSWWQSHSKWPYPT 392
LP + L SWW+ H KWPYP+
Sbjct: 170 LPKEARQKLLSWWELHYKWPYPS 192
>gi|82907968|gb|ABB93173.1| homeobox transcription factor KN1 [Picea abies]
gi|82907972|gb|ABB93175.1| homeobox transcription factor KN1 [Picea abies]
gi|82907974|gb|ABB93176.1| homeobox transcription factor KN1 [Picea abies]
gi|82907976|gb|ABB93177.1| homeobox transcription factor KN1 [Picea abies]
gi|82907978|gb|ABB93178.1| homeobox transcription factor KN1 [Picea abies]
gi|82907980|gb|ABB93179.1| homeobox transcription factor KN1 [Picea abies]
gi|82907982|gb|ABB93180.1| homeobox transcription factor KN1 [Picea abies]
gi|82907984|gb|ABB93181.1| homeobox transcription factor KN1 [Picea abies]
gi|82907988|gb|ABB93183.1| homeobox transcription factor KN1 [Picea abies]
gi|82907990|gb|ABB93184.1| homeobox transcription factor KN1 [Picea abies]
gi|82907992|gb|ABB93185.1| homeobox transcription factor KN1 [Picea abies]
gi|82907994|gb|ABB93186.1| homeobox transcription factor KN1 [Picea abies]
gi|82907996|gb|ABB93187.1| homeobox transcription factor KN1 [Picea abies]
gi|82907998|gb|ABB93188.1| homeobox transcription factor KN1 [Picea abies]
gi|82908000|gb|ABB93189.1| homeobox transcription factor KN1 [Picea abies]
gi|82908002|gb|ABB93190.1| homeobox transcription factor KN1 [Picea abies]
gi|82908004|gb|ABB93191.1| homeobox transcription factor KN1 [Picea abies]
gi|82908006|gb|ABB93192.1| homeobox transcription factor KN1 [Picea abies]
gi|82908008|gb|ABB93193.1| homeobox transcription factor KN1 [Picea abies]
gi|82908010|gb|ABB93194.1| homeobox transcription factor KN1 [Picea abies]
gi|82908012|gb|ABB93195.1| homeobox transcription factor KN1 [Picea abies]
gi|82908016|gb|ABB93197.1| homeobox transcription factor KN1 [Picea abies]
gi|82908018|gb|ABB93198.1| homeobox transcription factor KN1 [Picea abies]
gi|82908020|gb|ABB93199.1| homeobox transcription factor KN1 [Picea abies]
gi|82908022|gb|ABB93200.1| homeobox transcription factor KN1 [Picea abies]
gi|82908024|gb|ABB93201.1| homeobox transcription factor KN1 [Picea abies]
gi|82908026|gb|ABB93202.1| homeobox transcription factor KN1 [Picea abies]
gi|82908028|gb|ABB93203.1| homeobox transcription factor KN1 [Picea abies]
gi|82908030|gb|ABB93204.1| homeobox transcription factor KN1 [Picea abies]
gi|82908032|gb|ABB93205.1| homeobox transcription factor KN1 [Picea abies]
gi|82908036|gb|ABB93207.1| homeobox transcription factor KN1 [Picea abies]
gi|82908038|gb|ABB93208.1| homeobox transcription factor KN1 [Picea abies]
gi|82908040|gb|ABB93209.1| homeobox transcription factor KN1 [Picea abies]
gi|82908042|gb|ABB93210.1| homeobox transcription factor KN1 [Picea abies]
gi|82908044|gb|ABB93211.1| homeobox transcription factor KN1 [Picea abies]
gi|82908046|gb|ABB93212.1| homeobox transcription factor KN1 [Picea abies]
gi|82908048|gb|ABB93213.1| homeobox transcription factor KN1 [Picea abies]
gi|82908050|gb|ABB93214.1| homeobox transcription factor KN1 [Picea abies]
gi|82908052|gb|ABB93215.1| homeobox transcription factor KN1 [Picea abies]
gi|82908054|gb|ABB93216.1| homeobox transcription factor KN1 [Picea abies]
gi|82908056|gb|ABB93217.1| homeobox transcription factor KN1 [Picea abies]
gi|82908058|gb|ABB93218.1| homeobox transcription factor KN1 [Picea abies]
gi|82910342|gb|ABB94323.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910344|gb|ABB94324.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910346|gb|ABB94325.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910350|gb|ABB94327.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910352|gb|ABB94328.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910354|gb|ABB94329.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910356|gb|ABB94330.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910366|gb|ABB94335.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910368|gb|ABB94336.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910370|gb|ABB94337.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910372|gb|ABB94338.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910374|gb|ABB94339.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910376|gb|ABB94340.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910380|gb|ABB94342.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910382|gb|ABB94343.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910384|gb|ABB94344.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910386|gb|ABB94345.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910388|gb|ABB94346.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910390|gb|ABB94347.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910392|gb|ABB94348.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910394|gb|ABB94349.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910396|gb|ABB94350.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910398|gb|ABB94351.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910400|gb|ABB94352.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910402|gb|ABB94353.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910404|gb|ABB94354.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910408|gb|ABB94356.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910410|gb|ABB94357.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910412|gb|ABB94358.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910414|gb|ABB94359.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910416|gb|ABB94360.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910418|gb|ABB94361.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910420|gb|ABB94362.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910422|gb|ABB94363.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910424|gb|ABB94364.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910426|gb|ABB94365.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910428|gb|ABB94366.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910430|gb|ABB94367.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910432|gb|ABB94368.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910434|gb|ABB94369.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910436|gb|ABB94370.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910438|gb|ABB94371.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910444|gb|ABB94374.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910446|gb|ABB94375.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910448|gb|ABB94376.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910450|gb|ABB94377.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910452|gb|ABB94378.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910454|gb|ABB94379.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910458|gb|ABB94381.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910462|gb|ABB94383.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910464|gb|ABB94384.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910466|gb|ABB94385.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910468|gb|ABB94386.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910470|gb|ABB94387.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910472|gb|ABB94388.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910474|gb|ABB94389.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910480|gb|ABB94392.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910482|gb|ABB94393.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910484|gb|ABB94394.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910486|gb|ABB94395.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910488|gb|ABB94396.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910490|gb|ABB94397.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910492|gb|ABB94398.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910494|gb|ABB94399.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910496|gb|ABB94400.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910498|gb|ABB94401.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910500|gb|ABB94402.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910502|gb|ABB94403.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910504|gb|ABB94404.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910506|gb|ABB94405.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910514|gb|ABB94409.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910516|gb|ABB94410.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910520|gb|ABB94412.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910522|gb|ABB94413.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910524|gb|ABB94414.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910526|gb|ABB94415.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910528|gb|ABB94416.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910532|gb|ABB94418.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910536|gb|ABB94420.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910538|gb|ABB94421.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910540|gb|ABB94422.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910542|gb|ABB94423.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910544|gb|ABB94424.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910546|gb|ABB94425.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910548|gb|ABB94426.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910550|gb|ABB94427.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910552|gb|ABB94428.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910554|gb|ABB94429.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910556|gb|ABB94430.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910558|gb|ABB94431.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910560|gb|ABB94432.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910562|gb|ABB94433.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910568|gb|ABB94436.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910570|gb|ABB94437.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910572|gb|ABB94438.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910574|gb|ABB94439.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910576|gb|ABB94440.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910578|gb|ABB94441.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910582|gb|ABB94443.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910584|gb|ABB94444.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910586|gb|ABB94445.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910590|gb|ABB94447.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910592|gb|ABB94448.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910594|gb|ABB94449.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910596|gb|ABB94450.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910598|gb|ABB94451.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910600|gb|ABB94452.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910602|gb|ABB94453.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910604|gb|ABB94454.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910606|gb|ABB94455.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910608|gb|ABB94456.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910610|gb|ABB94457.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910612|gb|ABB94458.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910614|gb|ABB94459.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910616|gb|ABB94460.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910618|gb|ABB94461.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910620|gb|ABB94462.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910626|gb|ABB94465.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910628|gb|ABB94466.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910630|gb|ABB94467.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910632|gb|ABB94468.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910634|gb|ABB94469.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910636|gb|ABB94470.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910638|gb|ABB94471.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910640|gb|ABB94472.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910642|gb|ABB94473.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910644|gb|ABB94474.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910648|gb|ABB94476.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910650|gb|ABB94477.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910652|gb|ABB94478.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910656|gb|ABB94480.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910660|gb|ABB94482.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910662|gb|ABB94483.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910664|gb|ABB94484.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910666|gb|ABB94485.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910668|gb|ABB94486.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910670|gb|ABB94487.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910672|gb|ABB94488.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910676|gb|ABB94490.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910680|gb|ABB94492.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910682|gb|ABB94493.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910684|gb|ABB94494.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910688|gb|ABB94496.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910692|gb|ABB94498.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910694|gb|ABB94499.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910696|gb|ABB94500.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910698|gb|ABB94501.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910700|gb|ABB94502.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910702|gb|ABB94503.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910704|gb|ABB94504.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910706|gb|ABB94505.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910710|gb|ABB94507.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910712|gb|ABB94508.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910714|gb|ABB94509.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910716|gb|ABB94510.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910718|gb|ABB94511.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82910358|gb|ABB94331.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910588|gb|ABB94446.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|30348869|gb|AAP31411.1|AF457122_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
Length = 150
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 46/83 (55%), Gaps = 6/83 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P ++ + ++ + + +A AG +V D
Sbjct: 47 KAQIAGHPRYPSLLSAYIDCRKVGAP-SEVATLLEEIGR-----ERCAAASAGGEVVGMD 100
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELD+FM Y LL +KE+L +
Sbjct: 101 PELDEFMETYCRLLERYKEELSR 123
>gi|82910360|gb|ABB94332.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910686|gb|ABB94495.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|28564574|dbj|BAC57683.1| KNOX class homeodomain protein [Oryza sativa Japonica Group]
Length = 412
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 50/93 (53%), Gaps = 9/93 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 92 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV 269
ELDQFM Y +L ++E+L + + AME +
Sbjct: 144 PELDQFMEAYCNMLAKYREELTRPID-EAMEFL 175
>gi|82910624|gb|ABB94464.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910658|gb|ABB94481.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910678|gb|ABB94491.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|413916170|gb|AFW56102.1| hypothetical protein ZEAMMB73_314479 [Zea mays]
Length = 182
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 56/107 (52%), Gaps = 8/107 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHP Y LL+A++ ++ P P + A+L + V + G T +
Sbjct: 42 KAKIISHPHYYSLLAAYLEYNKVGAP----PEVSARLTEIAQEVETRQHMALGGLAATTE 97
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
ELDQFM Y +L F+E+L + ++ AME + +E L SL+
Sbjct: 98 PELDQFMEAYHEMLVKFREELTRPLQ-EAMEFMR---RVESQLNSLS 140
>gi|82908034|gb|ABB93206.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 170 NWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG 227
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++G
Sbjct: 165 NVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSIG 224
Query: 228 AGQGLVTDDKELDQFMTHYV 247
D ELDQFM Y
Sbjct: 225 M-------DPELDQFMEAYC 237
>gi|82910378|gb|ABB94341.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82907986|gb|ABB93182.1| homeobox transcription factor KN1 [Picea abies]
gi|82908014|gb|ABB93196.1| homeobox transcription factor KN1 [Picea abies]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82910534|gb|ABB94419.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910622|gb|ABB94463.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910674|gb|ABB94489.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82910460|gb|ABB94382.1| homeobox transcription factor KN1 [Picea glauca]
gi|82910476|gb|ABB94390.1| homeobox transcription factor KN1 [Picea glauca]
Length = 238
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|20530671|gb|AAM27189.1|AF457120_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
Length = 156
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 7/83 (8%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + + + A + G V D
Sbjct: 54 KAQIAGHPRYPSLLSAYIECRKVGAP----PEVATLL---EEIGRERCAAASAGGEVGLD 106
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELD+FM Y +L +KE+L +
Sbjct: 107 PELDEFMEAYCRVLERYKEELSR 129
>gi|255636180|gb|ACU18432.1| unknown [Glycine max]
Length = 196
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 12/107 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I +HPLY L+SA++ C ++ P +L + ++A+ H +G +D
Sbjct: 63 KTQIATHPLYPNLVSAYIECRKVGAP-PELASLLEEIARESHPTDALREIG-------ND 114
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
ELD+FM Y +L +K+ L + EA + IE L +L
Sbjct: 115 PELDEFMESYCEVLHRYKQGLSKPFN----EATLFLCSIESQLSNLC 157
>gi|82909222|gb|ABB93781.1| homeobox transcription factor KN2 [Picea mariana]
Length = 248
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 43/84 (51%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA++L+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKMLAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|108710345|gb|ABF98140.1| Homeobox protein KNOX3, putative [Oryza sativa Japonica Group]
gi|357640296|gb|AET87097.1| fused compound leaf 1 [Oryza sativa]
Length = 166
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 7/87 (8%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQ-SQHVVSKYSALGAGQGLVTD 235
KA+I+SHPLY LL A + C ++ P + + R+ A + +Y GQ +
Sbjct: 63 KAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSALAGELDSRAEDRYL---QGQ---SS 116
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVR 262
D ELD+FM Y+ +L S++++L + ++
Sbjct: 117 DPELDEFMETYIDMLVSYRQELTRPIQ 143
>gi|254749396|dbj|BAH86594.1| class1 knotted-like homeobox [Selaginella uncinata]
Length = 302
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 88/225 (39%), Gaps = 26/225 (11%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K+ I+ HP Y +L+ AH+ C RI V A + + + +
Sbjct: 40 KSAIILHPQYRELVRAHLNCKRIIEAVQDSGETSADSIIGELIHKHLLKFKPAKSSTVGN 99
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
ELDQFM YV +L ++ E L + A+ C E+EQ L + +SPG
Sbjct: 100 PELDQFMVAYVNVLNAWGEDLSKTF----YGAIECCREMEQEL---SNISPGT-HDILPP 151
Query: 297 DDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVR---------QELKHELK 347
DDED + S+EG L V +ELK L
Sbjct: 152 PDDEDYM---------SMEGVLEYMENSLTGGGGRGGEGSEVEFEIDPFAGDKELKEMLM 202
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ I + E L+K++ GKLP + L WW H PYPT
Sbjct: 203 CKFGGFIKGLNREQLQKKKKGKLPKEARDKLFQWWSEHLDHPYPT 247
>gi|82909008|gb|ABB93674.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82908216|gb|ABB93297.1| homeobox transcription factor KN2 [Picea abies]
Length = 248
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 12/84 (14%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+D + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDVLTNEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTHYVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMEAYCEMLTKYHEEL 248
>gi|82908950|gb|ABB93645.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82908952|gb|ABB93646.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908956|gb|ABB93648.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908960|gb|ABB93650.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908964|gb|ABB93652.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908966|gb|ABB93653.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908968|gb|ABB93654.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908970|gb|ABB93655.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908972|gb|ABB93656.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908974|gb|ABB93657.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908978|gb|ABB93659.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908980|gb|ABB93660.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908992|gb|ABB93666.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908994|gb|ABB93667.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909000|gb|ABB93670.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909004|gb|ABB93672.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909006|gb|ABB93673.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909014|gb|ABB93677.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909016|gb|ABB93678.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909018|gb|ABB93679.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909022|gb|ABB93681.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909024|gb|ABB93682.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909028|gb|ABB93684.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909030|gb|ABB93685.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909032|gb|ABB93686.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909046|gb|ABB93693.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82909020|gb|ABB93680.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 170 NWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG 227
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++G
Sbjct: 165 NVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIG 224
Query: 228 AGQGLVTDDKELDQFMTHYV 247
D ELDQFM Y
Sbjct: 225 M-------DPELDQFMEAYC 237
>gi|55669479|gb|AAV54607.1| homeobox transcription factor KN1 [Pinus strobus]
Length = 240
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 7/71 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K++IL+HP Y LL A++ C +I P + + R+DA + Q + +++G D
Sbjct: 176 KSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTREHQDQQRRTASIGM-------D 228
Query: 237 KELDQFMTHYV 247
ELDQFM Y
Sbjct: 229 PELDQFMEAYC 239
>gi|82908976|gb|ABB93658.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908998|gb|ABB93669.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909052|gb|ABB93696.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 42/80 (52%), Gaps = 9/80 (11%)
Query: 170 NWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG 227
N N Y K++IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++G
Sbjct: 165 NVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSIG 224
Query: 228 AGQGLVTDDKELDQFMTHYV 247
D ELDQFM Y
Sbjct: 225 M-------DPELDQFMEAYC 237
>gi|82908954|gb|ABB93647.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908958|gb|ABB93649.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908962|gb|ABB93651.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908984|gb|ABB93662.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908986|gb|ABB93663.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908988|gb|ABB93664.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908990|gb|ABB93665.1| homeobox transcription factor KN1 [Picea mariana]
gi|82908996|gb|ABB93668.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909002|gb|ABB93671.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909010|gb|ABB93675.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909012|gb|ABB93676.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909034|gb|ABB93687.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909036|gb|ABB93688.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909038|gb|ABB93689.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909040|gb|ABB93690.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909042|gb|ABB93691.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909044|gb|ABB93692.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909048|gb|ABB93694.1| homeobox transcription factor KN1 [Picea mariana]
gi|82909050|gb|ABB93695.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K+ IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSRILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|82908982|gb|ABB93661.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 169 VNWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSAL 226
N N Y K+ IL+HP Y LL A++ C +I P + + R+DA + Q+ + ++
Sbjct: 164 FNVDNEEYAIKSRILAHPQYPSLLGAYIDCQKIGAPPEAVARLDALTHEYQNQQRRTVSI 223
Query: 227 GAGQGLVTDDKELDQFMTHYV 247
G D ELDQFM Y
Sbjct: 224 GM-------DPELDQFMEAYC 237
>gi|302819516|ref|XP_002991428.1| hypothetical protein SELMODRAFT_448401 [Selaginella moellendorffii]
gi|300140821|gb|EFJ07540.1| hypothetical protein SELMODRAFT_448401 [Selaginella moellendorffii]
Length = 412
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 101/219 (46%), Gaps = 19/219 (8%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I++H Y LL++ + ++ P D++ ++D Q +++ A+ G +
Sbjct: 160 KASIVAHAHYPDLLASLLNIQKVGAPPDRVAKLDEA---GQLLLNLRPAVVTSVGA---N 213
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMA-CWEIEQSLQSLTGVSPGEGTGAT- 294
ELD FM Y ++ F+++ + +E MA C L ++ S + T
Sbjct: 214 PELDDFMVAYCAIMKEFEDEFRN-----VLEGAMAFCKTKTDQLGAIAAASVHMNSVVTS 268
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE-LKHELKQGYKEK 353
+SD + + + G E + + +E + + E LK L Q Y
Sbjct: 269 VSDHPVESEEPETTTTGGGAEIEEDIS-----SSEVGNEVDPLAKDENLKEYLAQRYGAY 323
Query: 354 IVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
I +++E L+K++ GKLP +T L WW++H KWPYP+
Sbjct: 324 IKGLKQEFLKKKKKGKLPKHSTEKLYEWWEAHIKWPYPS 362
>gi|108710348|gb|ABF98143.1| Homeobox protein OSH1, putative [Oryza sativa Japonica Group]
gi|125545214|gb|EAY91353.1| hypothetical protein OsI_12973 [Oryza sativa Indica Group]
gi|357640298|gb|AET87098.1| fused compound leaf 2 [Oryza sativa]
Length = 194
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 7/93 (7%)
Query: 173 NARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYS---ALGAG 229
A KA+I+SHPLY LL A V C ++ P + + R+ + + V +YS L A
Sbjct: 68 EAMIKAKIMSHPLYPSLLRAFVDCKKVGAPPEVVGRLSSLAVVTD--VPQYSGDRCLPAQ 125
Query: 230 QGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVR 262
Q D ELDQFM Y +L + ++L + ++
Sbjct: 126 Q--PAADPELDQFMETYCYMLTRYGQELARPIQ 156
>gi|148536333|gb|ABQ85719.1| shoot meristemless-like protein, partial [Populus balsamifera]
Length = 89
Score = 48.5 bits (114), Expect = 0.006, Method: Composition-based stats.
Identities = 23/81 (28%), Positives = 44/81 (54%), Gaps = 6/81 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y +LL+A+ C ++ P + + R++ A + + G + +D
Sbjct: 14 KAKIMAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------TNTGCIGED 67
Query: 237 KELDQFMTHYVLLLCSFKEQL 257
LDQFM Y +L ++++L
Sbjct: 68 PALDQFMEAYCEMLTKYEQEL 88
>gi|40218227|gb|AAR83015.1| putative Kn1-like homeobox protein [Populus tremula x Populus alba]
Length = 186
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 35/165 (21%)
Query: 236 DKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAV--------MACWEIEQSLQSLTGVSP 287
D ELDQFM Y +L ++E+L + ++ AM+ + M C L+
Sbjct: 1 DPELDQFMGAYYDMLVKYREELTRPIQ-EAMDFMRRIETQLNMIC---HGPLRIFNSDDK 56
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
EG G+ S+DD+D + L P I +E +ELK+ L
Sbjct: 57 SEGVGS--SEDDQDNSGGETEL--------------PEIDPRAED-------RELKNHLL 93
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + +++E+ +K++ GKLP + L SWW+ H KWPYP+
Sbjct: 94 RKYSGYLGSLKQELSKKKKKGKLPKEARQKLLSWWELHYKWPYPS 138
>gi|13021921|gb|AAK11581.1|AF323786_1 KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 204
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 9/91 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 91 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 142
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAME 267
ELDQFM Y +L ++E+L + + AME
Sbjct: 143 PELDQFMEAYCNMLAKYREELTRPID-EAME 172
>gi|75164699|sp|Q948L5.1|KNOS7_ORYSJ RecName: Full=Homeobox protein knotted-1-like 7; AltName:
Full=Homeobox protein HOS13; AltName: Full=Homeobox
protein OSH3
gi|15667617|dbj|BAB68309.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|41469271|gb|AAS07153.1| knotted1-type homeobox protein [Oryza sativa Japonica Group]
gi|108710860|gb|ABF98655.1| KNOX1 domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 365
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS------LTGVSPGEG 290
ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 133 PELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISESK 188
Query: 291 TGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGY 350
G SDDDE + S + +E + G + P +++L K L + Y
Sbjct: 189 AGLDSSDDDEHEDGSGMEM----MEAAEDEDLGIIDPRSDDKAL--------KRHLLRKY 236
Query: 351 KEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ +R+E+ +KR+ GKLP + L +WW+ H +WP P+
Sbjct: 237 SGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPNPS 278
>gi|357640306|gb|AET87102.1| fused compound leaf 1 [Zea mays]
Length = 163
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I+SHPLY +L A + C ++ P +V + SAL + +DD
Sbjct: 60 KAKIMSHPLYPAVLRAFIDCRKVGAP--------------PEIVGRLSALADDVEMNSDD 105
Query: 237 K---------ELDQFMTHYVLLLCSFKEQLQQHV 261
K ELDQFM Y +L ++++L + +
Sbjct: 106 KQEQRRAADPELDQFMEIYCHMLVRYRQELTRPI 139
>gi|357115634|ref|XP_003559593.1| PREDICTED: LOW QUALITY PROTEIN: homeobox protein knotted-1-like
4-like [Brachypodium distachyon]
Length = 314
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 58/225 (25%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRI----DAQLAQSQHVVSKYSALGAGQGL 232
KA+I+SHPLY LL A + C ++ P + + R+ D + S V+ + +
Sbjct: 70 KAKIMSHPLYPALLRAFIDCQKVGAPPEVVGRLSSLADDLKSNSDDVLEQPA-------- 121
Query: 233 VTDDKELDQFMTHYVLLLCSFKEQLQQHVR-----VHAMEAVMACWEIEQSLQSLTGVSP 287
D ELDQFM Y ++L + ++L + ++ MEA ++ +
Sbjct: 122 ---DPELDQFMETYCVMLVRYSQELTRQIQEADHFFRNMEAHISTSAL------------ 166
Query: 288 GEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELK 347
G+ S +DE ++ G + G +P ++ ELK +
Sbjct: 167 GDNCEGEASTEDEQEI--------GDVGG---------LPVQAA---------ELKDQFL 200
Query: 348 QGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ + + ++ +K+ GKLP L+ WW+ + + PYP+
Sbjct: 201 NKHNGYLSSLWRKLSKKKTKGKLPSGARQKLQQWWRLNWRSPYPS 245
>gi|290996216|ref|XP_002680678.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
gi|284094300|gb|EFC47934.1| homeobox protein PKNOX1-like protein [Naegleria gruberi]
Length = 739
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 342 LKHELKQGYKEKIVDIREE-ILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
+K LK Y KI+ +E ++R +R G LP T+VLKSW SH PYPT S
Sbjct: 559 MKQLLKDKYLTKILSTQENTLMRSKRRGNLPRHATNVLKSWLYSHFLHPYPTES 612
>gi|116783734|gb|ABK23067.1| unknown [Picea sitchensis]
Length = 241
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 93/203 (45%), Gaps = 35/203 (17%)
Query: 197 LRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLVTDDKELDQFMTHYVLLLCSF 253
++I P + + R+DA + QH + ++G D ELDQFM Y +L +
Sbjct: 1 MQIGAPPEVVARLDALTNEYENQQHRTT--VSIGM-------DPELDQFMEAYCEMLTKY 51
Query: 254 KEQLQQHVRVHAMEAVMACWEIEQSLQSLTG----VSPGEGTGATMSDDDEDQVDSDANL 309
E+L + + EA+ +IE L SL+ +SP + +D+ + S +
Sbjct: 52 HEELTKPFK----EAMSFLKKIEAQLNSLSKGTIRISP-----SAENDEKTEGGASSEEV 102
Query: 310 FDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRAGK 369
DGS G E + +E +ELK L + Y + +++E ++K++ GK
Sbjct: 103 EDGS--------GGETDFQEVDHHAVED--RELKDHLLRKYSGYLSSLKQEFMKKKKKGK 152
Query: 370 LPGDTTSVLKSWWQSHSKWPYPT 392
LP D L WW H KWPYP+
Sbjct: 153 LPKDARQKLLDWWTVHYKWPYPS 175
>gi|82908340|gb|ABB93359.1| homeobox transcription factor KN3 [Picea abies]
Length = 285
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++H Y +L++A++ C ++ P D + +D +L+Q H + + G D
Sbjct: 211 KAKIIAHVHYPRLVAAYIDCQKVGAPPDVVSELD-ELSQKCHAQQCVATISIGA-----D 264
Query: 237 KELDQFMTHYVLLLCSFKEQL 257
ELDQFM Y + ++E+L
Sbjct: 265 PELDQFMEAYCEMFIKYQEEL 285
>gi|82909026|gb|ABB93683.1| homeobox transcription factor KN1 [Picea mariana]
Length = 238
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 9/80 (11%)
Query: 170 NWQNARY--KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALG 227
N N Y K++IL+HP Y LL A++ C +I P + + R+D + Q+ + ++G
Sbjct: 165 NVDNEEYAIKSKILAHPQYPSLLGAYIDCQKIGAPPEAVARLDVLTHEYQNQQRRTVSIG 224
Query: 228 AGQGLVTDDKELDQFMTHYV 247
D ELDQFM Y
Sbjct: 225 M-------DPELDQFMEAYC 237
>gi|281200802|gb|EFA75019.1| putative homeobox transcription factor [Polysphondylium pallidum
PN500]
Length = 565
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 24/30 (80%)
Query: 363 RKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+KR+ GKLPG++TS+LKSW H+ PYPT
Sbjct: 480 KKRKRGKLPGESTSILKSWLFEHNMHPYPT 509
>gi|6016225|sp|P56667.1|KNX10_MAIZE RecName: Full=Homeobox protein knotted-1-like 10
gi|913143|gb|AAB33489.1| KNOX10=class 1 knotted1-like homeobox gene knox10 product
{homeodomain} [maize, Peptide Partial, 88 aa]
Length = 88
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+LK+ L Y + + E+ RK++ GKLP D L WWQ H +WPYP+
Sbjct: 4 DLKNRLLNKYSGYLSSLWRELSRKKKKGKLPRDARQKLLHWWQLHYRWPYPS 55
>gi|156257413|gb|ABU63127.1| transcription factor STM [Washingtonia robusta]
Length = 147
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 170 NWQNARYKAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHV--VSKYSALG 227
++ N+ KA+I++HP Y +LLSA+V C ++ P++ + R++ A S + S +A G
Sbjct: 66 DYDNSVIKAKIMAHPQYPRLLSAYVNCQKVGAPLEVVARLEEACASSFMIGQASSSAAAG 125
Query: 228 AGQGLVTDDKELDQFMTHYV 247
G +D LDQFM Y
Sbjct: 126 XGGSGGGEDPALDQFMEAYC 145
>gi|82911334|gb|ABB94812.1| homeobox transcription factor KN2 [Picea glauca]
Length = 250
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDA---QLAQSQHVVSKYSALGAGQGLV 233
KA+IL+HP Y LL A++ C +I P + + R+DA + QH + +
Sbjct: 174 KAKILAHPQYPSLLGAYIDCQKIGAPPEVVARLDALTHEYENQQHRTTVSIGM------- 226
Query: 234 TDDKELDQFMTH--YVLLLCSFKEQL 257
D ELDQFM Y +L + E+L
Sbjct: 227 --DPELDQFMVKEAYCEMLTKYHEEL 250
>gi|388493974|gb|AFK35053.1| unknown [Lotus japonicus]
Length = 183
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 65/145 (44%), Gaps = 21/145 (14%)
Query: 251 CSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDD---DEDQVDSDA 307
C ++ QQ + EA + +IE L L +GT SD+ DE S+
Sbjct: 5 CEVLQRCQQELFKPFNEATLFLCDIESQLSELC-----KGTLTMPSDNNRSDEAAGTSED 59
Query: 308 NLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRKRRA 367
L G +E + G M + QELK L + Y + +R+E L+KR+
Sbjct: 60 ELSCGKVEAVEYSG-------------MRQGDQELKEMLLRKYGGYLSSLRKEFLKKRKK 106
Query: 368 GKLPGDTTSVLKSWWQSHSKWPYPT 392
GKLP D L WW +H +WPYPT
Sbjct: 107 GKLPKDARKTLTDWWNTHYRWPYPT 131
>gi|357529158|gb|AET80767.1| shoot meristemless, partial [Distictis buccinatoria]
gi|357529164|gb|AET80769.1| shoot meristemless, partial [Dolichandra unguis-cati]
Length = 156
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LL+A++ C +I P + + R++ +L + + + S G G+V +D LD
Sbjct: 92 MAHPHYPRLLAAYLNCQKIGAPPEVVARLE-ELCATSATMGRNS---GGGGIVGEDPALD 147
Query: 241 QFMTHYV 247
QFM Y
Sbjct: 148 QFMEAYC 154
>gi|393705671|gb|AFN17081.1| knotted1, partial [Panicum virgatum]
Length = 109
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 8/102 (7%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQLA-QSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C + PV P + A+LA +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLECQKERPPVGAPPEVSARLAAMTQELEARQRTALG-GLGAATEP-ELDQ 58
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 59 FMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 96
>gi|13021918|gb|AAK11580.1|AF323785_1 KNOX class homeodomain protein [Oryza sativa Indica Group]
Length = 164
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 48/111 (43%), Gaps = 8/111 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + L + G + D
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRKVGAP----PEVTTLLEEIGREGRGGGGGATAGGEIGLD 111
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP 287
ELD+FM Y +L +KE+L + EA I L SL G +P
Sbjct: 112 PELDEFMETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAP 158
>gi|357640304|gb|AET87101.1| fused compound leaf 1 [Lotus japonicus]
Length = 150
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K I SHPLYE L+ AH+ CL++ + ++D +L + Q K + + + +
Sbjct: 28 KRRISSHPLYELLVEAHLDCLKVG----DISKLDRELKKEQ----KQAIMKKQNSGMFNH 79
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELD FM Y L L KE +++
Sbjct: 80 SELDLFMEAYCLALNKLKEAIEE 102
>gi|429345811|gb|AFZ84586.1| shoot meristemless-like protein, partial [Populus laurifolia]
Length = 72
Score = 45.1 bits (105), Expect = 0.062, Method: Composition-based stats.
Identities = 21/77 (27%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LL+A+ C ++ P + + R++ A + + A G + +D LD
Sbjct: 1 MAHPHYHRLLAAYANCQKVGAPPEVVARLEEACASAASIAP------ANTGCIGEDPALD 54
Query: 241 QFMTHYVLLLCSFKEQL 257
QFM Y +L ++++L
Sbjct: 55 QFMEAYCEMLTKYEQEL 71
>gi|3327273|dbj|BAA31700.1| short product from PKn2 alternative splicing [Ipomoea nil]
Length = 237
Score = 44.7 bits (104), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 30/166 (18%)
Query: 227 GAGQGLVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVS 286
GA + D ELD+FM Y +L +K L + EA IE L +L
Sbjct: 48 GAVSSCLGADPELDEFMETYYDMLVKYKSDLSKPFH----EATTFLNTIETQLSNLCK-- 101
Query: 287 PGEGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHEL 346
+ +GA SD+++ ++D + S+ + ++LK+ L
Sbjct: 102 --DESGAVSSDEEDSGGETDIQ----------------------QESITKTEERQLKNTL 137
Query: 347 KQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ Y + ++ E +K++ GKLP + L WW H KWPYPT
Sbjct: 138 LRKYGSHLSSLKLEFSKKKKKGKLPKEARQTLLDWWSDHYKWPYPT 183
>gi|62530887|gb|AAX85665.1| transcription factor DANDEKNOX1 [Taraxacum officinale]
Length = 175
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 31/158 (19%)
Query: 240 DQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP-----GEGTGAT 294
DQFM Y +L ++++L + + EA++ IE ++++ SP GEG G
Sbjct: 1 DQFMEAYCEMLIKYEQELSKPFK----EAMLFLSRIESQFKAIS-FSPSDSGCGEG-GMD 54
Query: 295 MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKI 354
+ E+ +D D N L+ ++E S ELK +L + Y +
Sbjct: 55 RNGSSEEDLDVDVNN-------------NNLVDPQAEES-------ELKGQLLRKYSGYL 94
Query: 355 VDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+++E ++KR+ GKLP + L WW H KWPYP+
Sbjct: 95 GSLKQEFMKKRKKGKLPKEARQQLLDWWTRHYKWPYPS 132
>gi|302819518|ref|XP_002991429.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300140822|gb|EFJ07541.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 417
Score = 44.7 bits (104), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 177 KAEILSHPLYEQLLSA-----HVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA I++H Y LL++ V ++ P D++ ++D Q +++ A+ G
Sbjct: 160 KASIVAHAHYPDLLASLLNIQKVLLAQVGAPPDRVAKLDEA---GQLLLNLRPAVVTSVG 216
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMA-CWEIEQSLQSLTGVSPGEG 290
+ ELD FM Y ++ F+++ + +E MA C L ++ S
Sbjct: 217 A---NPELDDFMVAYCAIMKEFEDEFRN-----VLEGAMAFCKTKTDQLGAIAAASVHMN 268
Query: 291 TGAT-MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE-LKHELKQ 348
+ T +SD + + + G E + + +E + + E LK L Q
Sbjct: 269 SVVTSVSDHPVESEEPETTTTGGGAEIEEDIS-----SSEVGNEVDPLAKDENLKEYLAQ 323
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y I +++E L+K++ GKLP +T L WW++H KWPYP+
Sbjct: 324 RYGAYIKGLKQEFLKKKKKGKLPKHSTEKLYEWWEAHIKWPYPS 367
>gi|302813278|ref|XP_002988325.1| KNOX transcription factor [Selaginella moellendorffii]
gi|300144057|gb|EFJ10744.1| KNOX transcription factor [Selaginella moellendorffii]
Length = 413
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 101/224 (45%), Gaps = 24/224 (10%)
Query: 177 KAEILSHPLYEQLLSA-----HVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQG 231
KA I++H Y LL++ V ++ P D++ ++D Q +++ A+ G
Sbjct: 156 KASIVAHAHYPDLLASLLNIQKVLLAQVGAPPDRVAKLDEA---GQLLLNLRPAVVTSVG 212
Query: 232 LVTDDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMA-CWEIEQSLQSLTGVSPGEG 290
+ ELD FM Y ++ F+++ + +E MA C L ++ S
Sbjct: 213 A---NPELDDFMVAYCAIMKEFEDEFRN-----VLEGAMAFCKTKTDQLGAIAAASIHMN 264
Query: 291 TGAT-MSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQE-LKHELKQ 348
+ T +SD + + + G E + + +E + + E LK L Q
Sbjct: 265 SVVTSVSDHPVESEEPETTTTGGGAEIEEDIS-----SSEVGNEVDPLAKDENLKEYLAQ 319
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y I +++E L+K++ GKLP +T L WW++H KWPYP+
Sbjct: 320 RYGAYIKGLKQEFLKKKKKGKLPKHSTEKLYEWWEAHIKWPYPS 363
>gi|393705569|gb|AFN17030.1| knotted1, partial [Panicum racemosum]
gi|393705575|gb|AFN17033.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C ++ P P + A+L A +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALG-GLGAATEP-ELDQ 54
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L FKE+L + ++ EA+ +E L SL+
Sbjct: 55 FMEAYHEMLVKFKEELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|119507932|dbj|BAF42340.1| KNOX class 1 homeodomain protein [Oryza sativa Japonica Group]
Length = 201
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 10/91 (10%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I++HP Y LL+A++ C ++ P + L R+ A +K A G+ D
Sbjct: 92 KAKIMAHPQYSALLAAYLDCQKVGAPPEVLERLTA-------TAAKLDARPPGRH-DARD 143
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAME 267
ELDQFM Y +L ++E+L + + AME
Sbjct: 144 PELDQFMA-YCNMLAKYREELTRPID-EAME 172
>gi|393705529|gb|AFN17010.1| knotted1, partial [Panicum gouinii]
gi|393705551|gb|AFN17021.1| knotted1, partial [Panicum pedersenii]
gi|393705589|gb|AFN17040.1| knotted1, partial [Panicum stramineum]
Length = 105
Score = 44.3 bits (103), Expect = 0.11, Method: Composition-based stats.
Identities = 33/101 (32%), Positives = 54/101 (53%), Gaps = 10/101 (9%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSKYSALGAGQGLVTDDKELDQF 242
P Y LL+A++ C ++ P P + A+L A +Q + ++ A G G T+ ELDQF
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRAALGGLGAATE-PELDQF 55
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
M Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 56 MEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|356574087|ref|XP_003555183.1| PREDICTED: RNA polymerase II-associated protein 3-like [Glycine
max]
Length = 507
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 34/53 (64%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
QELK L + Y + +R+E L+KR+ GKLP D +L WW +H +WPYPT
Sbjct: 402 QELKEMLLRKYGGYLSSLRKEFLKKRKKGKLPKDARMILMDWWNTHYRWPYPT 454
>gi|393705557|gb|AFN17024.1| knotted1, partial [Panicum racemosum]
gi|393705561|gb|AFN17026.1| knotted1, partial [Panicum racemosum]
Length = 107
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 12/103 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQLA-QSQHVVSK-YSALGAGQGLVTD-DKELD 240
P Y LL+A++ C ++ P P + A+LA +Q + ++ +ALG G G T+ + ELD
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALG-GLGAATEPEPELD 55
Query: 241 QFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
QFM Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 56 QFMEAYHEMLVKFREELTRPLQ----EAMEFMQRVESQLSSLS 94
>gi|393705559|gb|AFN17025.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 12/102 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C ++ P P + A+L A +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLQCQKVGAP----PEVSARLTAMAQELEARQRTALG-GLGAATEP-ELDQ 54
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L FKE+L + ++ EA +E L SL+
Sbjct: 55 FMEAYHEMLVKFKEELTRPLQ----EATEFMRRVESQLSSLS 92
>gi|357529161|gb|AET80768.1| shoot meristemless, partial [Bignonia callistegioides]
Length = 156
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 181 LSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDDKELD 240
++HP Y +LL+A++ C + P + + R++ +L + + + S G G+V +D LD
Sbjct: 92 MAHPHYPRLLAAYLNCQKTGAPPEVVARLE-ELCATSATMGRNS---GGGGIVGEDPALD 147
Query: 241 QFMTHYV 247
QFM Y
Sbjct: 148 QFMEAYC 154
>gi|125570066|gb|EAZ11581.1| hypothetical protein OsJ_01445 [Oryza sativa Japonica Group]
Length = 169
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + A L + + G G G + D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEV-ASLLKEIGRERRAGGGGGGAGQIGVD 98
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELD+FM Y +L +KE+L +
Sbjct: 99 PELDEFMEAYCRVLVRYKEELSR 121
>gi|393705567|gb|AFN17029.1| knotted1, partial [Panicum racemosum]
Length = 105
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQLA-QSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C ++ P P + A+LA +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALG-GLGAATEP-ELDQ 54
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L F+E+L + ++ EA+ ++E L SL+
Sbjct: 55 FMEAYHEMLVKFREELTRPLQ----EAMEFMQKVESQLSSLS 92
>gi|82908530|gb|ABB93454.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I SHP Y QLL+A++ C +I P + + +D +++Q + + + G D
Sbjct: 189 KTKIASHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATMDIGV-----D 242
Query: 237 KELDQFMTHYVLLLCSF 253
ELDQFM Y +L +
Sbjct: 243 PELDQFMEAYCQMLIKY 259
>gi|125525555|gb|EAY73669.1| hypothetical protein OsI_01553 [Oryza sativa Indica Group]
Length = 169
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C ++ P P + A L + + G G G + D
Sbjct: 44 KAQIAGHPRYPTLLSAYIECRKVGAP----PEV-ASLLEEIGRERRAGGGGGGAGQIGVD 98
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELD+FM Y +L +KE+L +
Sbjct: 99 PELDEFMEAYCRVLVRYKEELSR 121
>gi|393705751|gb|AFN17121.1| knotted1, partial [Panicum virgatum]
Length = 105
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C ++ P P + A+L A +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQQLEARQRTALG-GLGAATEP-ELDQ 54
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 55 FMEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLSSLS 92
>gi|393705627|gb|AFN17059.1| knotted1, partial [Urochloa plantaginea]
Length = 105
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQL-AQSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C ++ P P + A+L A +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLTAMAQELEARQRTALG-GLGSATEP-ELDQ 54
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L F+E+L + ++ EA+ ++E L SL+
Sbjct: 55 FMEAYHEMLVKFREELTRPLQ----EAMEFMRKVESQLNSLS 92
>gi|393705571|gb|AFN17031.1| knotted1, partial [Panicum racemosum]
gi|393705577|gb|AFN17034.1| knotted1, partial [Panicum racemosum]
gi|393705629|gb|AFN17060.1| knotted1, partial [Panicum urvilleanum]
gi|393705633|gb|AFN17062.1| knotted1, partial [Panicum urvilleanum]
Length = 105
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQLA-QSQHVVSK-YSALGAGQGLVTDDKELDQ 241
P Y LL+A++ C ++ P P + A+LA +Q + ++ +ALG G G T+ ELDQ
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALG-GLGAATEP-ELDQ 54
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLT 283
FM Y +L F+E+L + ++ EA+ +E L SL+
Sbjct: 55 FMEAYHEMLVKFREELTRPLQ----EAMEFMQRVESQLSSLS 92
>gi|89953327|gb|ABD83273.1| Fgenesh protein 1 [Beta vulgaris]
Length = 158
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 299 DEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIR 358
DE V SD + G ++ D L P + ER +LK +L + + I ++
Sbjct: 9 DEGVVSSDEDYSGGEIDVQD------LQPKDEER--------DLKDQLLRRFGSHISSLK 54
Query: 359 EEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
E +K++ GKLP + +L WW +H KWPYPT++
Sbjct: 55 LEFSKKKKKGKLPREARQMLFEWWNAHYKWPYPTLA 90
>gi|222630076|gb|EEE62208.1| hypothetical protein OsJ_16995 [Oryza sativa Japonica Group]
Length = 263
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 80/217 (36%), Gaps = 73/217 (33%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA+I HP Y LLSA++ C +
Sbjct: 56 KAQIAGHPSYPSLLSAYIECRK-------------------------------------- 77
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMS 296
Y +L +KE+L + EA I L SL G +P +
Sbjct: 78 -------ETYCRVLERYKEELTRPFD----EAASFLTGIHTQLASLCGGAP------PPT 120
Query: 297 DDDEDQ-VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIV 355
D+ ED+ DA+ D FG E L + ELK L + Y +
Sbjct: 121 DNSEDEPCSGDADAAD----------FG----QEHSSRLAD---HELKEMLLKKYSGCLS 163
Query: 356 DIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 164 RLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 200
>gi|55669497|gb|AAV54616.1| homeobox transcription factor KN4 [Picea abies]
Length = 260
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I HP Y QLL+A++ C +I P + + +D +++Q + + + G D
Sbjct: 176 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATMDIGV-----D 229
Query: 237 KELDQFMTHYVLLLCSFKEQLQQHVR 262
ELDQFM Y +L + +L + +
Sbjct: 230 PELDQFMEAYCQMLIKYHLELSKPFK 255
>gi|414872574|tpg|DAA51131.1| TPA: knotted1 [Zea mays]
Length = 193
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 23/150 (15%)
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDEDQ 302
M Y +L F+E+L + ++ EA+ +E L SL+ + +EDQ
Sbjct: 1 MEAYHEMLVKFREELTRPLQ----EAMEFMRRVESQLNSLSISGRSLRNILSSGSSEEDQ 56
Query: 303 VDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEIL 362
S G E P+ G V QELKH L + Y + +++E+
Sbjct: 57 EGSG-----GETELPEVDAHG--------------VDQELKHHLLKKYSGYLSSLKQELS 97
Query: 363 RKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+K++ GKLP + L SWW H KWPYP+
Sbjct: 98 KKKKKGKLPKEARQQLLSWWDQHYKWPYPS 127
>gi|297601619|ref|NP_001051139.2| Os03g0727000 [Oryza sativa Japonica Group]
gi|255674861|dbj|BAF13053.2| Os03g0727000 [Oryza sativa Japonica Group]
Length = 195
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%)
Query: 338 VRQELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
V QELKH L + Y + +++E+ +K++ GKLP D L +WW+ H KWPYP+ S
Sbjct: 73 VDQELKHHLLKKYSGYLSSLKQELSKKKKKGKLPKDARQQLLNWWELHYKWPYPSES 129
>gi|6016227|sp|P56668.1|KNX11_MAIZE RecName: Full=Homeobox protein knotted-1-like 11
Length = 88
Score = 42.4 bits (98), Expect = 0.46, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 3 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 55
>gi|6016228|sp|P56669.1|HLG3_MAIZE RecName: Full=Homeobox protein liguleless 3
Length = 85
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y + +R E L+KR+ GKLP D +VL WW +H +WPYPT
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 52
>gi|4887614|dbj|BAA77820.1| HOS16 [Oryza sativa Japonica Group]
Length = 138
Score = 42.0 bits (97), Expect = 0.51, Method: Composition-based stats.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 24 HELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 76
>gi|82908562|gb|ABB93470.1| homeobox transcription factor KN4 [Picea abies]
gi|82912803|gb|ABB95536.1| homeobox transcription factor KN4 [Picea glauca]
gi|82912819|gb|ABB95544.1| homeobox transcription factor KN4 [Picea glauca]
gi|82913015|gb|ABB95642.1| homeobox transcription factor KN4 [Picea glauca]
Length = 260
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
K +I HP Y QLL+A++ C +I P + + +D +++Q + + + G D
Sbjct: 189 KTKIACHPHYPQLLAAYMDCQKIGAPPEVVTVLD-EISQENQLGRHLATMDIGV-----D 242
Query: 237 KELDQFMTHYVLLLCSF 253
ELDQFM Y +L +
Sbjct: 243 PELDQFMEAYCQMLIKY 259
>gi|30348875|gb|AAP31414.1|AF457125_1 knotted1-like homeodomain protein liguleless3 [Zea mays]
Length = 146
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 33/52 (63%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y + +R E L+KR+ GKLP D +VL WW +H +WPYPT
Sbjct: 33 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARTVLLEWWNTHYRWPYPT 84
>gi|6016220|sp|P56663.1|KNOX5_MAIZE RecName: Full=Homeobox protein knotted-1-like 5
Length = 85
Score = 42.0 bits (97), Expect = 0.60, Method: Composition-based stats.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 1 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 52
>gi|30348870|gb|AAP31412.1|AF457123_1 knotted1-like homeodomain protein liguleless4b [Zea mays]
Length = 148
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 33 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 85
>gi|20530672|gb|AAM27190.1|AF457121_1 knotted1-like homeodomain protein liguleless4a [Zea mays]
Length = 151
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 35 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYRWPYPT 87
>gi|393705717|gb|AFN17104.1| knotted1, partial [Panicum amarum var. amarulum]
Length = 105
Score = 41.2 bits (95), Expect = 0.85, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 184 PLYEQLLSAHVACLRIATPVDQLPRIDAQLA-QSQHVVSKYSALGAGQGLVTDDKELDQF 242
P Y LL+A++ C ++ P P + A+LA +Q + ++ G G T+ ELDQF
Sbjct: 1 PHYYSLLAAYLECQKVGAP----PEVSARLAAMTQELEARQRTALGGLGAATE-PELDQF 55
Query: 243 MTHYVLLLCSFKEQLQQHVRVHAME 267
M Y +L F+E+L + ++ AME
Sbjct: 56 MEAYHEMLVKFREELTRPLQ-EAME 79
>gi|125570067|gb|EAZ11582.1| hypothetical protein OsJ_01446 [Oryza sativa Japonica Group]
Length = 144
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 31 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 82
>gi|15667545|dbj|BAB68273.1| transcription factor OSH3 [Oryza meridionalis]
Length = 159
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + DD
Sbjct: 69 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASHMPPAPDD 127
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 128 PELDQFMEDYCKLLVECKEELSR 150
>gi|398257710|gb|AFO71866.1| STM-like protein 2, partial [Capnoides sempervirens]
Length = 145
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 31/150 (20%)
Query: 249 LLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGE----GTGATMSDDDEDQVD 304
+L ++++L + + EA++ IE ++LT SP + G + ++ VD
Sbjct: 1 MLSKYEQELTKPFK----EAMLFLSRIEAQFKALTVTSPSDNSACGEAVNQNGSSDEDVD 56
Query: 305 SDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEILRK 364
+ N D P +R ELK +L + Y + +++E L+K
Sbjct: 57 ASENYID---------------PQAEDR--------ELKGQLLRKYSGYLGSLKQEFLKK 93
Query: 365 RRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
R+ GKLP + L WW H KWPYP+ S
Sbjct: 94 RKKGKLPKEARQQLLDWWSRHYKWPYPSES 123
>gi|242057169|ref|XP_002457730.1| hypothetical protein SORBIDRAFT_03g012497 [Sorghum bicolor]
gi|241929705|gb|EES02850.1| hypothetical protein SORBIDRAFT_03g012497 [Sorghum bicolor]
Length = 79
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK L + Y + +R E L+KR+ GKLP D S L WW +H WPYPT
Sbjct: 27 RELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALMDWWNTHYCWPYPT 79
>gi|67594817|ref|XP_665898.1| SNF2 domain/helicase domain/RING finger domain-containing protein
[Cryptosporidium hominis TU502]
gi|54656765|gb|EAL35669.1| SNF2 domain/helicase domain/RING finger domain-containing protein
[Cryptosporidium hominis]
Length = 1792
Score = 40.4 bits (93), Expect = 1.6, Method: Composition-based stats.
Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 11/108 (10%)
Query: 44 ETTAPNWLNSALLRSQQAQQQAAHFSDTNFLNLRT-TANNNNSNNNNTASDSDASQTPNQ 102
ETT N NS S A A+ TN L + TAN+N +N+N + S++ S T N
Sbjct: 215 ETTNSNTANSETTNSNTANSNTANSETTNSNTLNSNTANSNTANSNTSNSNTANSNTANS 274
Query: 103 WLSRTSSSLLHRNHSDVIDDVTPANDSIIAAVESADLKNANSENMNNA 150
S +S++ +S+ ++ T +++ N+N+ N N A
Sbjct: 275 NTSNSSTANSETTNSNTLNSNTA----------NSNTANSNTSNSNTA 312
>gi|218193686|gb|EEC76113.1| hypothetical protein OsI_13376 [Oryza sativa Indica Group]
Length = 347
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 235 DDKELDQFMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQS------LTGVSPG 288
+D ELDQFM Y LL KE+L + ++ EA +E L S LT +
Sbjct: 113 EDPELDQFMEDYCKLLVECKEELSRPLQ----EAEEFLRTVESELNSINSGPPLTALISE 168
Query: 289 EGTGATMSDDDEDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQ 348
G SDDDE + S + +E + G + P +++L K L +
Sbjct: 169 SKAGLDSSDDDEHEDGSGMEM----MEAAEDEDLGIIDPRSDDKAL--------KRHLLR 216
Query: 349 GYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
Y + +R+E+ +KR+ GKLP + L +WW+ H +WPYP+
Sbjct: 217 KYSGYLGGLRKELSKKRKKGKLPKEARQKLLTWWELHYRWPYPS 260
>gi|50846082|gb|AAT84993.1| shoot meristemless-like protein [Chelidonium majus]
Length = 159
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 73/153 (47%), Gaps = 24/153 (15%)
Query: 242 FMTHYVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSPGEGTGATMSDDDED 301
FM Y +L ++++L + + EA++ IE ++LT S + G D
Sbjct: 1 FMEAYCEMLTKYEQELTKPFK----EAMLFLSRIECQFKALTVSSSSDSVG-------HD 49
Query: 302 QVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIREEI 361
VD + + D +E D I ++E +RV LK +L + Y + +++E
Sbjct: 50 AVDRNGSS-DEDVEASDNY-----IDPQAE----DRV---LKGQLLRKYSGYLGSLKQEF 96
Query: 362 LRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
L+KR+ GKLP + L WW H KWPYP+ S
Sbjct: 97 LKKRKKGKLPKEARQQLLEWWSRHYKWPYPSES 129
>gi|326497911|dbj|BAJ94818.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 31/52 (59%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELK L + Y + +R E L+KR+ GKLP D L WW +H +WPYPT
Sbjct: 36 ELKEMLLKKYSGCLSRLRSEFLKKRKKGKLPKDARLALMDWWNTHYRWPYPT 87
>gi|66865827|gb|AAY57563.1| knotted 1-type homeobox protein 8 [Zea mays]
Length = 137
Score = 39.3 bits (90), Expect = 4.0, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELKH+L + Y + +R+E ++++ GKLP + L WW+ H KWPYP+
Sbjct: 9 KELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 61
>gi|15667543|dbj|BAB68272.1| transcription factor OSH3 [Oryza glaberrima]
gi|15667547|dbj|BAB68274.1| transcription factor OSH3 [Oryza barthii]
Length = 161
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 71 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 129
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 130 PELDQFMEDYCKLLVECKEELSR 152
>gi|15667549|dbj|BAB68275.1| transcription factor OSH3 [Oryza glumipatula]
Length = 161
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 71 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 129
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 130 PELDQFMEDYCKLLVECKEELSR 152
>gi|15667575|dbj|BAB68288.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667597|dbj|BAB68299.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667607|dbj|BAB68304.1| transcription factor OSH3 [Oryza rufipogon]
gi|15667611|dbj|BAB68306.1| transcription factor OSH3 [Oryza rufipogon]
gi|15667613|dbj|BAB68307.1| transcription factor OSH3 [Oryza rufipogon]
Length = 161
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 71 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 129
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 130 PELDQFMEDYCKLLVECKEELSR 152
>gi|378926271|gb|AFC67275.1| KNAT1/BP transcription factor splice variant [Arabidopsis thaliana]
Length = 214
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 74/155 (47%), Gaps = 29/155 (18%)
Query: 246 YVLLLCSFKEQLQQHVRVHAMEAVMACWEIEQSLQSLTGVSP------GEGTGATMSDDD 299
Y +L ++E+L + ++ AME + IE L S+ SP +G M D
Sbjct: 17 YCDMLVKYREELTRPIQ-EAMEFIR---RIESQL-SMLCQSPIHILNNPDGKSDNMGSSD 71
Query: 300 EDQVDSDANLFDGSLEGPDTMGFGPLIPTESERSLMERVRQELKHELKQGYKEKIVDIRE 359
E+Q ++ G E P+ + P +R ELK+ L + Y + +++
Sbjct: 72 EEQENNSG----GETELPE------IDPRAEDR--------ELKNHLLKKYSGYLSSLKQ 113
Query: 360 EILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPTVS 394
E+ +K++ GKLP + L +WW+ H KWPYP+ S
Sbjct: 114 ELSKKKKKGKLPKEARQKLLTWWELHYKWPYPSES 148
>gi|384500890|gb|EIE91381.1| hypothetical protein RO3G_16092 [Rhizopus delemar RA 99-880]
Length = 207
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 366 RAGKLPGDTTSVLKSWWQSHSKWPYPT 392
R G LP D T+VLK W + H K PYPT
Sbjct: 113 RRGNLPKDVTAVLKGWLKDHLKHPYPT 139
>gi|15667609|dbj|BAB68305.1| transcription factor OSH3 [Oryza rufipogon]
Length = 164
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPTPED 132
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 133 PELDQFMEDYCKLLVECKEELSR 155
>gi|218188058|gb|EEC70485.1| hypothetical protein OsI_01554 [Oryza sativa Indica Group]
Length = 110
Score = 38.5 bits (88), Expect = 6.7, Method: Composition-based stats.
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 346 LKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
L + Y + +R E L+KR+ GKLP D S L WW +H +WPYPT
Sbjct: 2 LLKKYSGCLSRLRSEFLKKRKKGKLPKDARSALLEWWNTHYRWPYPT 48
>gi|15667589|dbj|BAB68295.1| transcription factor OSH3 [Oryza sativa Indica Group]
Length = 164
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAETA-EEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 133 PELDQFMEDYCKLLVECKEELSR 155
>gi|15667551|dbj|BAB68276.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667553|dbj|BAB68277.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667555|dbj|BAB68278.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667557|dbj|BAB68279.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667559|dbj|BAB68280.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667561|dbj|BAB68281.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667563|dbj|BAB68282.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667565|dbj|BAB68283.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667567|dbj|BAB68284.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667569|dbj|BAB68285.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667571|dbj|BAB68286.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667573|dbj|BAB68287.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667577|dbj|BAB68289.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667579|dbj|BAB68290.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667581|dbj|BAB68291.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667583|dbj|BAB68292.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667585|dbj|BAB68293.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667587|dbj|BAB68294.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667591|dbj|BAB68296.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667593|dbj|BAB68297.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667595|dbj|BAB68298.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667599|dbj|BAB68300.1| transcription factor OSH3 [Oryza sativa Indica Group]
gi|15667601|dbj|BAB68301.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667603|dbj|BAB68302.1| transcription factor OSH3 [Oryza sativa Japonica Group]
gi|15667605|dbj|BAB68303.1| transcription factor OSH3 [Oryza rufipogon]
Length = 164
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 74 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 132
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 133 PELDQFMEDYCKLLVECKEELSR 155
>gi|15667541|dbj|BAB68271.1| transcription factor OSH3 [Oryza rufipogon]
Length = 163
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 1/83 (1%)
Query: 177 KAEILSHPLYEQLLSAHVACLRIATPVDQLPRIDAQLAQSQHVVSKYSALGAGQGLVTDD 236
KA I+SHP Y +LL+A + C ++ P + A A+ + + +A + +D
Sbjct: 73 KARIVSHPRYHRLLAAFLDCHKVGCPAEAA-EEIAAAARVREARQRAAAAASRMPPAPED 131
Query: 237 KELDQFMTHYVLLLCSFKEQLQQ 259
ELDQFM Y LL KE+L +
Sbjct: 132 PELDQFMEDYCKLLVECKEELSR 154
>gi|6016218|sp|P56661.1|KNOX3_MAIZE RecName: Full=Homeobox protein knotted-1-like 3
Length = 88
Score = 38.1 bits (87), Expect = 8.2, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 340 QELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
+ELK +L + Y + ++R+E+ +KR+ KLP + L SWW+ H +WPYP+
Sbjct: 3 KELKKQLLRKYSGCLGNLRKELCKKRKKDKLPKEARQKLLSWWELHYRWPYPS 55
>gi|371767738|gb|AEX56224.1| knotted-like 1 protein [Dactylorhiza incarnata]
Length = 148
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 15/57 (26%)
Query: 351 KEKIVDIREEILRKRRA---------------GKLPGDTTSVLKSWWQSHSKWPYPT 392
K++ D++E++LRK GKLP + VL WW +H KWPYPT
Sbjct: 74 KDEERDLKEKLLRKYSGYLSSLKKEFSKKKKKGKLPREARQVLLDWWTAHYKWPYPT 130
>gi|6016224|sp|P56666.1|KNOX8_MAIZE RecName: Full=Homeobox protein knotted-1-like 8
Length = 85
Score = 37.7 bits (86), Expect = 9.5, Method: Composition-based stats.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 341 ELKHELKQGYKEKIVDIREEILRKRRAGKLPGDTTSVLKSWWQSHSKWPYPT 392
ELKH+L + Y + +R+E ++++ GKLP + L WW+ H KWPYP+
Sbjct: 1 ELKHQLLRKYGGYLGGLRQEFSKRKKKGKLPKEARQKLLHWWELHYKWPYPS 52
>gi|371767726|gb|AEX56218.1| knotted-like 2 protein [Dactylorhiza incarnata]
Length = 143
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 15/57 (26%)
Query: 351 KEKIVDIREEILRKRRA---------------GKLPGDTTSVLKSWWQSHSKWPYPT 392
K++ D++E++LRK GKLP + VL WW +H KWPYPT
Sbjct: 69 KDEERDLKEKLLRKYSGYLSSLKKEFSKKKKKGKLPREARQVLLDWWTAHYKWPYPT 125
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.313 0.126 0.368
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,731,563,359
Number of Sequences: 23463169
Number of extensions: 287960950
Number of successful extensions: 2651809
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2727
Number of HSP's successfully gapped in prelim test: 7030
Number of HSP's that attempted gapping in prelim test: 2258540
Number of HSP's gapped (non-prelim): 250728
length of query: 418
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 273
effective length of database: 8,957,035,862
effective search space: 2445270790326
effective search space used: 2445270790326
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)