Your job contains 1 sequence.
>014792
MNDCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVR
YFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVG
KDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ
LPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN
SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP
NNDTIHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGN
NMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVNS
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014792
(418 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2825339 - symbol:PFI "AT1G71440" species:3702 ... 1038 1.0e-124 2
FB|FBgn0033055 - symbol:tbce "tubulin-specific chaperone ... 393 1.7e-36 1
UNIPROTKB|Q32KS0 - symbol:TBCE "Tubulin-specific chaperon... 381 3.1e-35 1
ZFIN|ZDB-GENE-051030-120 - symbol:tbce "tubulin folding c... 381 3.1e-35 1
UNIPROTKB|Q5RBD9 - symbol:TBCE "Tubulin-specific chaperon... 381 3.1e-35 1
UNIPROTKB|F1NVX8 - symbol:TBCE "Uncharacterized protein" ... 379 5.1e-35 1
UNIPROTKB|Q15813 - symbol:TBCE "Tubulin-specific chaperon... 373 2.2e-34 1
UNIPROTKB|Q5U508 - symbol:tbce "Tubulin-specific chaperon... 370 4.6e-34 1
RGD|1305533 - symbol:Tbce "tubulin folding cofactor E" sp... 361 4.2e-33 1
MGI|MGI:1917680 - symbol:Tbce "tubulin-specific chaperone... 355 2.2e-32 1
UNIPROTKB|B7Z3P1 - symbol:TBCE "cDNA FLJ59210, highly sim... 337 5.2e-30 1
DICTYBASE|DDB_G0269990 - symbol:tbcE "tubulin binding cof... 252 2.3e-23 2
WB|WBGene00019503 - symbol:K07H8.1 species:6239 "Caenorha... 271 2.7e-21 1
UNIPROTKB|G4NCM1 - symbol:MGG_00378 "Tubulin-specific cha... 271 5.3e-21 1
SGD|S000000809 - symbol:PAC2 "Microtubule effector requir... 217 6.1e-15 1
MGI|MGI:1925543 - symbol:Tbcel "tubulin folding cofactor ... 211 1.7e-14 1
UNIPROTKB|Q5QJ74 - symbol:TBCEL "Tubulin-specific chapero... 211 1.7e-14 1
RGD|1308880 - symbol:Tbcel "tubulin folding cofactor E-li... 210 2.3e-14 1
CGD|CAL0005987 - symbol:orf19.2921 species:5476 "Candida ... 209 4.6e-14 1
ASPGD|ASPL0000026995 - symbol:AN5531 species:162425 "Emer... 187 2.0e-11 1
UNIPROTKB|F1RGX1 - symbol:TBCE "Uncharacterized protein" ... 158 8.1e-11 1
MGI|MGI:1920564 - symbol:Lrrc69 "leucine rich repeat cont... 158 1.1e-08 1
ZFIN|ZDB-GENE-030131-9296 - symbol:tbcb "tubulin folding ... 150 2.5e-08 1
MGI|MGI:3045299 - symbol:Lrrd1 "leucine rich repeats and ... 155 1.1e-07 1
UNIPROTKB|P25147 - symbol:inlB "Internalin B" species:169... 148 4.3e-07 1
UNIPROTKB|Q99426 - symbol:TBCB "Tubulin-folding cofactor ... 139 5.2e-07 1
DICTYBASE|DDB_G0277983 - symbol:tbcB "tubulin folding cof... 140 5.9e-07 1
UNIPROTKB|Q15435 - symbol:PPP1R7 "Protein phosphatase 1 r... 140 1.3e-06 1
UNIPROTKB|E1BAL0 - symbol:CLIP3 "Uncharacterized protein"... 141 2.0e-06 1
UNIPROTKB|Q96DZ5 - symbol:CLIP3 "CAP-Gly domain-containin... 141 2.0e-06 1
UNIPROTKB|Q5R686 - symbol:CLIP3 "CAP-Gly domain-containin... 141 2.0e-06 1
MGI|MGI:1923936 - symbol:Clip3 "CAP-GLY domain containing... 140 2.6e-06 1
RGD|1306245 - symbol:Clip3 "CAP-GLY domain containing lin... 140 2.6e-06 1
MGI|MGI:1913661 - symbol:Tbcb "tubulin folding cofactor B... 133 2.7e-06 1
RGD|1308169 - symbol:Ppp1r7 "protein phosphatase 1, regul... 136 3.5e-06 1
UNIPROTKB|D2HFU1 - symbol:PANDA_009788 "Putative uncharac... 138 3.8e-06 1
POMBASE|SPAC13D6.05 - symbol:alp11 "tubulin specific chap... 131 3.9e-06 1
UNIPROTKB|Q3T0W4 - symbol:PPP1R7 "Protein phosphatase 1 r... 135 4.6e-06 1
UNIPROTKB|Q8HXL4 - symbol:CKAP1 "Uncharacterized protein"... 131 4.6e-06 1
UNIPROTKB|C9JJD0 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.8e-06 1
UNIPROTKB|C9JJN7 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.8e-06 1
UNIPROTKB|C9JTE5 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.8e-06 1
UNIPROTKB|C9JZA4 - symbol:DCTN1 "Dynactin subunit 1" spec... 114 4.8e-06 1
ZFIN|ZDB-GENE-070117-2205 - symbol:dctn1a "dynactin 1a" s... 119 5.3e-06 2
MGI|MGI:1913635 - symbol:Ppp1r7 "protein phosphatase 1, r... 134 5.9e-06 1
UNIPROTKB|Q5E951 - symbol:TBCB "Tubulin-folding cofactor ... 130 6.0e-06 1
MGI|MGI:2674939 - symbol:Podn "podocan" species:10090 "Mu... 137 6.6e-06 1
UNIPROTKB|Q724E1 - symbol:inlE "Internalin E" species:265... 135 8.1e-06 1
WB|WBGene00011345 - symbol:dma-1 species:6239 "Caenorhabd... 135 1.1e-05 1
UNIPROTKB|Q96JA1 - symbol:LRIG1 "Leucine-rich repeats and... 136 1.8e-05 1
UNIPROTKB|O42184 - symbol:CLIP1 "CAP-Gly domain-containin... 123 2.3e-05 2
ZFIN|ZDB-GENE-040426-1719 - symbol:tbcela "tubulin foldin... 130 2.4e-05 1
FB|FBgn0036494 - symbol:Toll-6 "Toll-6" species:7227 "Dro... 135 3.4e-05 1
UNIPROTKB|C9J1B7 - symbol:DCTN1 "Dynactin subunit 1" spec... 106 3.5e-05 1
RGD|1309991 - symbol:Podn "podocan" species:10116 "Rattus... 130 4.2e-05 1
UNIPROTKB|Q6QI48 - symbol:Scp2 "LRRGT00160" species:10116... 130 4.2e-05 1
FB|FBgn0019968 - symbol:Khc-73 "Kinesin-73" species:7227 ... 135 4.5e-05 1
UNIPROTKB|I3LGS7 - symbol:CLIP3 "Uncharacterized protein"... 128 5.6e-05 1
CGD|CAL0006089 - symbol:orf19.6170 species:5476 "Candida ... 123 6.4e-05 1
UNIPROTKB|Q723K6 - symbol:inlA "Internalin-A" species:265... 129 7.2e-05 1
FB|FBgn0038504 - symbol:Sur-8 "Sur-8" species:7227 "Droso... 127 8.8e-05 1
SGD|S000006095 - symbol:NIP100 "Large subunit of the dyna... 128 0.00010 1
UNIPROTKB|Q81YT0 - symbol:BAS0520 "Putative internalin" s... 129 0.00010 1
TIGR_CMR|BA_0552 - symbol:BA_0552 "internalin, putative" ... 129 0.00010 1
TAIR|locus:2076224 - symbol:EMB2804 "AT3G10220" species:3... 119 0.00011 1
UNIPROTKB|I3LEB7 - symbol:PODN "Uncharacterized protein" ... 126 0.00011 1
UNIPROTKB|Q96M69 - symbol:LRGUK "Leucine-rich repeat and ... 127 0.00012 1
UNIPROTKB|F5H270 - symbol:CLIP1 "CAP-Gly domain-containin... 101 0.00012 1
WB|WBGene00011637 - symbol:T09A5.9 species:6239 "Caenorha... 121 0.00014 1
CGD|CAL0005838 - symbol:NIP100 species:5476 "Candida albi... 127 0.00014 1
UNIPROTKB|Q5A6R8 - symbol:NIP100 "Putative uncharacterize... 127 0.00014 1
RGD|1309965 - symbol:Tbcb "tubulin folding cofactor B" sp... 118 0.00015 1
POMBASE|SPAC27D7.13c - symbol:ssm4 "dynactin microtubule-... 125 0.00016 1
MGI|MGI:1921604 - symbol:Lrguk "leucine-rich repeats and ... 126 0.00016 1
UNIPROTKB|J9P0I9 - symbol:CLIP2 "Uncharacterized protein"... 125 0.00017 1
ZFIN|ZDB-GENE-040718-372 - symbol:lrrc57 "leucine rich re... 116 0.00023 1
FB|FBgn0020503 - symbol:CLIP-190 "Cytoplasmic linker prot... 134 0.00024 2
ZFIN|ZDB-GENE-051113-288 - symbol:ppp1r7 "protein phospha... 119 0.00025 1
UNIPROTKB|Q9UDT6 - symbol:CLIP2 "CAP-Gly domain-containin... 125 0.00027 1
ZFIN|ZDB-GENE-040426-1130 - symbol:chad "chondroadherin" ... 119 0.00028 1
UNIPROTKB|E1BQI8 - symbol:CLIP2 "Uncharacterized protein"... 125 0.00029 2
DICTYBASE|DDB_G0268578 - symbol:gefV "leucine-rich repeat... 121 0.00031 2
MGI|MGI:109347 - symbol:Lum "lumican" species:10090 "Mus ... 118 0.00032 1
UNIPROTKB|E1BHH6 - symbol:PODN "Uncharacterized protein" ... 122 0.00033 1
WB|WBGene00022789 - symbol:lron-2 species:6239 "Caenorhab... 121 0.00035 1
UNIPROTKB|E1BGH3 - symbol:CLIP2 "Uncharacterized protein"... 125 0.00037 2
RGD|67404 - symbol:Clip1 "CAP-GLY domain containing linke... 124 0.00046 1
UNIPROTKB|F1MAH8 - symbol:Clip1 "Protein Clip1" species:1... 124 0.00046 1
UNIPROTKB|E2QWB0 - symbol:CLIP1 "Uncharacterized protein"... 124 0.00048 2
UNIPROTKB|E2QWD0 - symbol:CLIP1 "Uncharacterized protein"... 124 0.00048 2
UNIPROTKB|Q6UXM1 - symbol:LRIG3 "Leucine-rich repeats and... 123 0.00049 1
GENEDB_PFALCIPARUM|MAL8P1.46 - symbol:MAL8P1.46 "outer ar... 78 0.00053 2
UNIPROTKB|Q8IB59 - symbol:MAL8P1.46 "Outer arm dynein lig... 78 0.00053 2
UNIPROTKB|Q05443 - symbol:LUM "Lumican" species:9913 "Bos... 116 0.00054 1
UNIPROTKB|P35458 - symbol:DCTN1 "Dynactin subunit 1" spec... 123 0.00054 1
MGI|MGI:1919100 - symbol:Clip4 "CAP-GLY domain containing... 120 0.00059 1
UNIPROTKB|F1Q140 - symbol:PODN "Uncharacterized protein" ... 119 0.00060 1
ZFIN|ZDB-GENE-061103-397 - symbol:zgc:153913 "zgc:153913"... 118 0.00060 1
SGD|S000005092 - symbol:ALF1 "Alpha-tubulin folding prote... 113 0.00062 1
MGI|MGI:1928401 - symbol:Clip1 "CAP-GLY domain containing... 123 0.00063 1
WARNING: Descriptions of 12 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2825339 [details] [associations]
symbol:PFI "AT1G71440" species:3702 "Arabidopsis
thaliana" [GO:0009793 "embryo development ending in seed dormancy"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IGI] [GO:0007021
"tubulin complex assembly" evidence=ISS] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009507
GO:GO:0009793 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 HSSP:Q20728
EMBL:BT002403 EMBL:BT008888 EMBL:AK118835 IPI:IPI00529655
RefSeq:NP_565017.1 UniGene:At.35185 UniGene:At.48359
ProteinModelPortal:Q8GRL7 SMR:Q8GRL7 STRING:Q8GRL7 PaxDb:Q8GRL7
PRIDE:Q8GRL7 DNASU:843485 EnsemblPlants:AT1G71440.1 GeneID:843485
KEGG:ath:AT1G71440 TAIR:At1g71440 HOGENOM:HOG000241155
InParanoid:Q8GRL7 OMA:EMYVLSA PhylomeDB:Q8GRL7
ProtClustDB:CLSN2689143 ArrayExpress:Q8GRL7 Genevestigator:Q8GRL7
Uniprot:Q8GRL7
Length = 531
Score = 1038 (370.5 bits), Expect = 1.0e-124, Sum P(2) = 1.0e-124
Identities = 208/328 (63%), Positives = 259/328 (78%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQAK 65
ES+ +GQRVHS ND+RR+GTVKYVG+V+GYSGTW+GVDWD G+GKH+GS+NGV YF +
Sbjct: 8 ESFIIGQRVHSLNDSRRVGTVKYVGDVEGYSGTWIGVDWDQDGDGKHNGSVNGVFYFNGR 67
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQ 125
SQ S SFVR NLS GI+L +AL +RYR S+K+EEDEMYVLSA N+ VSI+L+G DKIQ
Sbjct: 68 SQSSASFVRSQNLSRGITLLQALELRYRTISTKDEEDEMYVLSAGNRRVSIQLLGGDKIQ 127
Query: 126 DKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPA 183
DK S+FEELTSA+L YLGVSS G +++G+I+ NLK LDLTGNL+SDW++IGA EQLPA
Sbjct: 128 DKLSRFEELTSASLSYLGVSSLGVSSDLGSILPNLKLLDLTGNLISDWEEIGALCEQLPA 187
Query: 184 LAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
L LNLS N +S ++ LPQLK+IR+LVLN +G++W QVEIL+ SLP +EELHLMGN IS
Sbjct: 188 LTTLNLSCNSLSSDIKSLPQLKNIRVLVLNNSGLSWTQVEILRRSLPGIEELHLMGNMIS 247
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
IT SS Q F++L+LLNL+DNCI++WSE+LKL Q+ LEQLYLNKN L+RI+ N
Sbjct: 248 TITSTSSSDDQAFNSLRLLNLDDNCISDWSEVLKLSQLPCLEQLYLNKNKLSRIFQSVNG 307
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLG 331
T ES E+ PF +L CLLLG
Sbjct: 308 T--------ESSEKGSDPFPSLSCLLLG 327
Score = 208 (78.3 bits), Expect = 1.0e-124, Sum P(2) = 1.0e-124
Identities = 38/60 (63%), Positives = 51/60 (85%)
Query: 359 GNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVNS 418
G N I DLAS+D+L+ FP+L+DIRLSENP+SDP RGG+ RF ++ARL K+++LNGSEV +
Sbjct: 327 GANNIGDLASVDALNGFPQLVDIRLSENPISDPVRGGVPRFVLVARLTKVQVLNGSEVRA 386
>FB|FBgn0033055 [details] [associations]
symbol:tbce "tubulin-specific chaperone E" species:7227
"Drosophila melanogaster" [GO:0007021 "tubulin complex assembly"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0046785
"microtubule polymerization" evidence=IGI;IMP] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000938 Pfam:PF01302 EMBL:AE013599 GO:GO:0005737
GO:GO:0022008 GO:GO:0007274 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0008582 GO:GO:0046785
RefSeq:NP_995747.1 ProteinModelPortal:A1Z6J4 SMR:A1Z6J4
STRING:A1Z6J4 PaxDb:A1Z6J4 PRIDE:A1Z6J4 GeneID:35532 UCSC:CG7861-RA
FlyBase:FBgn0033055 eggNOG:KOG3207 InParanoid:A1Z6J4
OrthoDB:EOG4T4B9T PhylomeDB:A1Z6J4 NextBio:793888 Bgee:A1Z6J4
Uniprot:A1Z6J4
Length = 542
Score = 393 (143.4 bits), Expect = 1.7e-36, P = 1.7e-36
Identities = 101/308 (32%), Positives = 167/308 (54%)
Query: 9 YKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQ 67
Y LG R+ ++ GTV+YVGEV G+ G+WLG++WD G GKH+G ++G RYFQ ++
Sbjct: 12 YPLGTRIKIGDN---YGTVRYVGEVSGHMGSWLGIEWDDGLRGKHNGIVDGKRYFQTQTP 68
Query: 68 KSGSFVRVHNLSPGISLPEALRVRYRG-ESSKEEEDEMYVLSASNKHVSIELVGKDKIQD 126
GSF+R + P +L +A R RY +SS +E + AS + E+VG DKI
Sbjct: 69 TGGSFIRPGKVGPCATLEDAARERYLNYDSSNVDESLIREAQASLQASLFEVVGMDKIAR 128
Query: 127 KFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
K SKFE+L ++ V++ G +T+L L+++ L+ +W+ + + +QLP+L
Sbjct: 129 KQSKFEQLEEVSVDQTPVNAAGYL--KELTHLTTLNVSHTLIWNWEIVASIAQQLPSLTN 186
Query: 187 LNLSNNLM----SKEVTGL-PQLKSI-RILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
LNLS+N + S ++T L P + + RI + +C +W V P + L L N
Sbjct: 187 LNLSSNRLVLPTSSQITELEPSFRQLKRINLRSCGFSDWKDVMHTALLWPNILSLGLQEN 246
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP 300
S+ ++ V + F L L+L I ++ ++ KL + +L L + +N + I P
Sbjct: 247 SLGQLAEVDRTKI--FKQLHELDLHRTNIMDFDQVTKLGNLTTLRLLNIMENGIEEIKLP 304
Query: 301 NNDTIHEL 308
+ D+ +L
Sbjct: 305 DCDSQEKL 312
>UNIPROTKB|Q32KS0 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9913
"Bos taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=IEA] [GO:0048589 "developmental
growth" evidence=IEA] [GO:0014889 "muscle atrophy" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008344
"adult locomotory behavior" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] Reactome:REACT_17065
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450 Pfam:PF01302
GO:GO:0005829 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 Reactome:REACT_103209 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875
Pfam:PF12799 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:BT026156
EMBL:BC109955 IPI:IPI00713122 RefSeq:NP_001033121.1 UniGene:Bt.3254
ProteinModelPortal:Q32KS0 SMR:Q32KS0 STRING:Q32KS0 PRIDE:Q32KS0
Ensembl:ENSBTAT00000018249 GeneID:505066 KEGG:bta:505066 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 InParanoid:Q32KS0
OMA:CLRNPLT OrthoDB:EOG41NTKV NextBio:20866964 Uniprot:Q32KS0
Length = 528
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 101/298 (33%), Positives = 161/298 (54%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV N TV++ G V +G WLGV+WD GKHDGS G YF+ + +
Sbjct: 10 IGRRVE-VNGEH--ATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESS-KEEEDEMYVLSASNKHVSIELVGKDKIQDKF 128
GSF+R H ++ G+ A++ RY E KEEE E V+ NK V E +G D + +
Sbjct: 67 GSFIRPHKVNFGVDFLTAIKNRYVLEDEPKEEETEQIVI-IGNKPV--ETIGFDSVIKQQ 123
Query: 129 SKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
S+ +L +L V+ G I N++ +DL+ NLLS W+++ +QL L V
Sbjct: 124 SQLSKLQDVSLRNCAVNGAGDKGEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEV 183
Query: 187 LNLSNN-LMSKEVTGLPQ--LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
LNLS N L S + P ++++LVLN TGV W +V P LE+L+L N+I
Sbjct: 184 LNLSENKLTSPSSSPSPTGTFPTLKVLVLNRTGVTWAEVLRCASGWPVLEKLYLESNNII 243
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPN 301
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ I++P+
Sbjct: 244 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLFLIAYLPRLEQLILSDIGISSIHFPD 297
Score = 123 (48.4 bits), Expect = 0.00019, P = 0.00019
Identities = 60/225 (26%), Positives = 106/225 (47%)
Query: 202 PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQG-FDNLQ 260
P ++SI L N +W +V + L LE L+L N ++ +P SSP G F L+
Sbjct: 153 PNIRSID-LSKNLLS-SWEEVIDIADQLKHLEVLNLSENKLT--SPSSSPSPTGTFPTLK 208
Query: 261 LLNLEDNCIAEWSEILKLCQ-IRSLEQLYLNKNNLNRIYYPNN--DTIHEL-VSAHESHE 316
+L L + W+E+L+ LE+LYL NN+ P + T+ L +S+++ +
Sbjct: 209 VLVLNRTGVT-WAEVLRCASGWPVLEKLYLESNNIIISERPTDVLQTVKLLDLSSNQLID 267
Query: 317 ES------YLP-FQNLCCLLLG-NSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLAS 368
E+ YLP + L +G +S P + F + + +N I +
Sbjct: 268 ENQLFLIAYLPRLEQLILSDIGISSIHFPDAGIGCKTSMFPSLQYLV--LNDNQIAQWSF 325
Query: 369 IDSLDSFPKLMDIRLSENPVSDPGRGG-ISRFAIIARLGKIKILN 412
++ LD L + + NP+++ + +R IIAR+G+++ LN
Sbjct: 326 MNELDKLQSLHALSCTRNPLTEGSKDAQTTRQFIIARIGQLRTLN 370
Score = 118 (46.6 bits), Expect = 0.00066, P = 0.00066
Identities = 54/177 (30%), Positives = 87/177 (49%)
Query: 124 IQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPA 183
I D+ E L + SS + GT T LK L L ++ W ++ P
Sbjct: 174 IADQLKHLEVLNLSENKLTSPSSSPSPTGTFPT-LKVLVLNRTGVT-WAEVLRCASGWPV 231
Query: 184 LAVLNL-SNNLM-SKEVTGLPQLKSIRILVLNCTG-VNWMQVEILKHSLPALEELHLMGN 240
L L L SNN++ S+ T + L+++++L L+ ++ Q+ ++ + LP LE+L L
Sbjct: 232 LEKLYLESNNIIISERPTDV--LQTVKLLDLSSNQLIDENQLFLIAY-LPRLEQLILSDI 288
Query: 241 SISEITPVSSPI---VQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNL 294
IS I + I F +LQ L L DN IA+WS + +L +++SL L +N L
Sbjct: 289 GISSIHFPDAGIGCKTSMFPSLQYLVLNDNQIAQWSFMNELDKLQSLHALSCTRNPL 345
>ZFIN|ZDB-GENE-051030-120 [details] [associations]
symbol:tbce "tubulin folding cofactor E"
species:7955 "Danio rerio" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 Pfam:PF01302
ZFIN:ZDB-GENE-051030-120 GO:GO:0005737 GO:GO:0005856
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
EMBL:BC085669 IPI:IPI00507049 RefSeq:NP_001035078.2
UniGene:Dr.84734 ProteinModelPortal:Q5U378 SMR:Q5U378 STRING:Q5U378
Ensembl:ENSDART00000065585 Ensembl:ENSDART00000127915 GeneID:664760
KEGG:dre:664760 InParanoid:Q5U378 NextBio:20902338
ArrayExpress:Q5U378 Bgee:Q5U378 Uniprot:Q5U378
Length = 521
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 125/382 (32%), Positives = 199/382 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV D R GTV+YVG V +G WLGV+WD+ GKHDGS +GVRYF +
Sbjct: 7 VGRRV--CCDGER-GTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRHPTG 63
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSFVR S G+ AL+ RY E + +EM + S+K ++ +VG + ++ K S
Sbjct: 64 GSFVRPQKASFGVDYVTALKQRYEVEIEEVTAEEMKI---SSK--TVVMVGFENVKKKQS 118
Query: 130 KFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ LT L VS+PG I ++ LDL+GNLLS W+ + A EQL +L L
Sbjct: 119 -VKNLTEVGLRRCEVSAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQEL 177
Query: 188 NLSNNLMSKEVTGLPQ-LKS----IRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
+LS+N +S ++ P L S +R+L +N + W QV +EEL+L N+I
Sbjct: 178 HLSHNRLS--ISSAPSSLSSAFSHLRVLSINSCALTWTQVLHCAPMWQQVEELYLADNNI 235
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN 302
+E+ ++Q L +L+L +N IA+ +L++ + LE+L L+ +L+ I + ++
Sbjct: 236 TELLRPEH-VLQA---LTVLDLSNNQIAQ-ETVLEISHLPRLERLNLSSTSLSEIKF-SD 289
Query: 303 DTIHELVSAHESHEESYLPFQNLCCLLLGNS-KKLPTSSHVSFVVYFLIFAF-SLHASGN 360
+ + + +E L N+ + N +KLP+ ++S L+ +L +
Sbjct: 290 VPAGKKTTLFPALKELLLDDNNISEWRVVNELEKLPSLVYLSCRRNPLLHKEKNLETARQ 349
Query: 361 NMIEDLASIDSLDSFPKLMDIR 382
MI L ++ LD L D R
Sbjct: 350 IMIARLGQLELLDMRQILSDER 371
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 52/212 (24%), Positives = 103/212 (48%)
Query: 218 NWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK 277
+W + + L +L+ELHL N +S I+ S + F +L++L++ ++C W+++L
Sbjct: 160 SWEVLAAITEQLDSLQELHLSHNRLS-ISSAPSSLSSAFSHLRVLSI-NSCALTWTQVLH 217
Query: 278 LCQI-RSLEQLYLNKNNLNRIYYPNND----TIHELVSAHESHEESYLPFQNLCCLLLGN 332
+ + +E+LYL NN+ + P + T+ +L S ++ +E+ L +L L N
Sbjct: 218 CAPMWQQVEELYLADNNITELLRPEHVLQALTVLDL-SNNQIAQETVLEISHLPRLERLN 276
Query: 333 SKKLPTS----SHVSFVVYFLIF-AFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSENP 387
S S V +F A +N I + ++ L+ P L+ + NP
Sbjct: 277 LSSTSLSEIKFSDVPAGKKTTLFPALKELLLDDNNISEWRVVNELEKLPSLVYLSCRRNP 336
Query: 388 VSDPGRG-GISRFAIIARLGKIKILNGSEVNS 418
+ + +R +IARLG++++L+ ++ S
Sbjct: 337 LLHKEKNLETARQIMIARLGQLELLDMRQILS 368
>UNIPROTKB|Q5RBD9 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9601
"Pongo abelii" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:CR858712 RefSeq:NP_001125526.1
UniGene:Pab.19173 ProteinModelPortal:Q5RBD9 SMR:Q5RBD9 PRIDE:Q5RBD9
GeneID:100172438 KEGG:pon:100172438 InParanoid:Q5RBD9
Uniprot:Q5RBD9
Length = 527
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 98/298 (32%), Positives = 160/298 (53%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+GQRV N TV++ G V +G WLGV+WD GKHDGS G YFQ +
Sbjct: 10 IGQRVE-VNGEH--ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPGANIGTI--VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G G N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEGCPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
N+S N + +TG L ++++LVLN TG+ W +V P LEEL+L N+I
Sbjct: 185 NVSENKLKFPSGSVLTGT--LSALKVLVLNQTGITWAEVLRCAMGCPGLEELYLESNNIF 242
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPN 301
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ +++P+
Sbjct: 243 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDIGISSLHFPD 296
>UNIPROTKB|F1NVX8 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 Pfam:PF01302 GO:GO:0000226 GO:GO:0048589
Gene3D:2.30.30.190 InterPro:IPR019955 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 PROSITE:PS50053
GeneTree:ENSGT00530000063405 GO:GO:0007023 OMA:CLRNPLT
EMBL:AADN02051948 EMBL:AADN02051947 IPI:IPI00583476
Ensembl:ENSGALT00000022606 Uniprot:F1NVX8
Length = 526
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 91/297 (30%), Positives = 156/297 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
LG+RV + GTV+YVG V +G WLGV+WD GKHDG+ G +YF+ + +
Sbjct: 7 LGRRVLCGTE---YGTVRYVGSVSPTAGVWLGVEWDDPQRGKHDGTYEGKQYFKCRHPRG 63
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + + G+ A++ RY G + K++ + ++E VG+D I+ K S
Sbjct: 64 GSFIRPNKANFGVDFLTAVKGRY-GLNEKQDAQNGIENTCVFGKKTVEFVGRDSIEKKQS 122
Query: 130 KFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ L ++ VS G I N++ +DL+ NL++ W + Q+P L L
Sbjct: 123 QLHRLVHISVHECAVSHAGQKEEISGTCPNIRHIDLSKNLVAYWDTVIDIASQVPNLETL 182
Query: 188 NLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
++S N M S ++ + L LN TG+ W +V + P LEEL+L N+I+
Sbjct: 183 DISGNKMKFSSTSISASSAFPKLTTLALNQTGITWTEVLLCAPGWPVLEELYLTSNNITA 242
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPN 301
+ + ++Q L+LL+L +N + + S++ + + LEQL L N ++ +++P+
Sbjct: 243 LERPDN-VLQ---TLKLLDLSNNLLLDGSQLHLIGHLPRLEQLILTNNGISSVHFPD 295
Score = 150 (57.9 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 64/236 (27%), Positives = 104/236 (44%)
Query: 196 KEVTGL-PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQ 254
+E++G P ++ I L N W V + +P LE L + GN + + + S
Sbjct: 144 EEISGTCPNIRHID-LSKNLVAY-WDTVIDIASQVPNLETLDISGNKM-KFSSTSISASS 200
Query: 255 GFDNLQLLNLEDNCIAEWSEILKLCQIR--SLEQLYLNKNNLNRIYYPNN--DTI----- 305
F L L L I W+E+L LC LE+LYL NN+ + P+N T+
Sbjct: 201 AFPKLTTLALNQTGIT-WTEVL-LCAPGWPVLEELYLTSNNITALERPDNVLQTLKLLDL 258
Query: 306 --HELVSAHESHEESYLP-FQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLH-ASGNN 361
+ L+ + H +LP + L +L N F +F H A +N
Sbjct: 259 SNNLLLDGSQLHLIGHLPRLEQL--ILTNNGISSVHFPDAEFGCKTKMFPSLKHLAINDN 316
Query: 362 MIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGIS-RFAIIARLGKIKILNGSEV 416
I +SI+ LD P L + NP+ D + + R IIA++ ++++LN S++
Sbjct: 317 KISQWSSINELDKLPSLQVLECRNNPLMDTEKNPETLRQLIIAKISQLEVLNKSQI 372
Score = 119 (46.9 bits), Expect = 0.00051, P = 0.00051
Identities = 72/285 (25%), Positives = 125/285 (43%)
Query: 47 YG-NGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISLPEAL---RVRYRGESSKEEED 102
YG N K D NG+ +K+ FV ++ S L V S +++
Sbjct: 86 YGLNEKQDAQ-NGIENTCVFGKKTVEFVGRDSIEKKQSQLHRLVHISVHECAVSHAGQKE 144
Query: 103 EMYVLSASNKHVSIE--LVGK-DKIQDKFSKFEELTSAALP--YLGVSSPGANIGTIVTN 157
E+ + +H+ + LV D + D S+ L + + + SS + +
Sbjct: 145 EISGTCPNIRHIDLSKNLVAYWDTVIDIASQVPNLETLDISGNKMKFSSTSISASSAFPK 204
Query: 158 LKELDLTGNLLSDWKDIGAFGEQLPALAVLNL-SNNLMSKEVTGLPQLKSIRILVL-NCT 215
L L L ++ W ++ P L L L SNN+ + E L+++++L L N
Sbjct: 205 LTTLALNQTGIT-WTEVLLCAPGWPVLEELYLTSNNITALERPD-NVLQTLKLLDLSNNL 262
Query: 216 GVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPI---VQGFDNLQLLNLEDNCIAEW 272
++ Q+ ++ H LP LE+L L N IS + + + F +L+ L + DN I++W
Sbjct: 263 LLDGSQLHLIGH-LPRLEQLILTNNGISSVHFPDAEFGCKTKMFPSLKHLAINDNKISQW 321
Query: 273 SEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE 317
S I +L ++ SL+ L N L N +T+ +L+ A S E
Sbjct: 322 SSINELDKLPSLQVLECRNNPLMDTE-KNPETLRQLIIAKISQLE 365
>UNIPROTKB|Q15813 [details] [associations]
symbol:TBCE "Tubulin-specific chaperone E" species:9606
"Homo sapiens" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0014889
"muscle atrophy" evidence=IEA] [GO:0048589 "developmental growth"
evidence=IEA] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006457 "protein folding" evidence=TAS] [GO:0007023
"post-chaperonin tubulin folding pathway" evidence=IDA] [GO:0051087
"chaperone binding" evidence=TAS] [GO:0005874 "microtubule"
evidence=TAS] [GO:0044267 "cellular protein metabolic process"
evidence=TAS] [GO:0051084 "'de novo' posttranslational protein
folding" evidence=TAS] Reactome:REACT_17015 InterPro:IPR000938
Pfam:PF01302 GO:GO:0005737 GO:GO:0000226 GO:GO:0008344
GO:GO:0009791 GO:GO:0051084 GO:GO:0048589 GO:GO:0051087
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 GO:GO:0014889
GO:GO:0048936 GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513
HOVERGEN:HBG084170 OrthoDB:EOG41NTKV EMBL:U61232 EMBL:BT007086
EMBL:AL357556 EMBL:AL672237 EMBL:BC008654 IPI:IPI00018402
RefSeq:NP_001072983.1 RefSeq:NP_003184.1 UniGene:Hs.740537
ProteinModelPortal:Q15813 SMR:Q15813 STRING:Q15813
PhosphoSite:Q15813 DMDM:74762146 PaxDb:Q15813 PeptideAtlas:Q15813
PRIDE:Q15813 DNASU:6905 Ensembl:ENST00000366601
Ensembl:ENST00000406207 GeneID:6905 KEGG:hsa:6905 UCSC:uc001hwz.1
GeneCards:GC01P235530 HGNC:HGNC:11582 HPA:HPA026552 HPA:HPA026557
HPA:HPA026559 MIM:241410 MIM:244460 MIM:604934 neXtProt:NX_Q15813
Orphanet:93324 Orphanet:2323 PharmGKB:PA36346 InParanoid:Q15813
PhylomeDB:Q15813 GenomeRNAi:6905 NextBio:27001 ArrayExpress:Q15813
Bgee:Q15813 CleanEx:HS_TBCE Genevestigator:Q15813
GermOnline:ENSG00000116957 Uniprot:Q15813
Length = 527
Score = 373 (136.4 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 95/298 (31%), Positives = 159/298 (53%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV N TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVE-VNGEH--ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G + N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
N+S N + +TG L +++LVLN TG+ W +V P LEEL+L N+I
Sbjct: 185 NVSENKLKFPSGSVLTGT--LSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNNIF 242
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPN 301
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ +++P+
Sbjct: 243 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPD 296
>UNIPROTKB|Q5U508 [details] [associations]
symbol:tbce "Tubulin-specific chaperone E" species:8355
"Xenopus laevis" [GO:0007023 "post-chaperonin tubulin folding
pathway" evidence=ISS] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0005856 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007023
CTD:6905 HOVERGEN:HBG084170 EMBL:BC084879 RefSeq:NP_001088530.1
UniGene:Xl.18306 ProteinModelPortal:Q5U508 SMR:Q5U508 PRIDE:Q5U508
GeneID:495403 KEGG:xla:495403 Xenbase:XB-GENE-865843 Uniprot:Q5U508
Length = 522
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 96/288 (33%), Positives = 151/288 (52%)
Query: 26 TVKYVGEVQGYSGTWLGVDWD-YGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISL 84
TV+YVG V G WLGV+WD + GKH+G+ G +YF GSF+R+ + G+
Sbjct: 22 TVRYVGNVPPTPGLWLGVEWDNHLRGKHNGTHEGTKYFTCSHPTGGSFIRLKKANFGVDF 81
Query: 85 PEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGV 144
ALR RY K E++E V+ ++ELVG + IQ++ SK +L +L V
Sbjct: 82 LAALRKRY---GLKSEQNEELVIGKK----TVELVGFESIQEEQSKLNKLKDVSLRECAV 134
Query: 145 SSPGANIGTIV---TNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLM--SKEVT 199
S+ G G I N+ DL+ NL S W+ + QL L L+LS N + S +
Sbjct: 135 SNAGEK-GQICHSCPNIMTADLSKNLFSSWESLAHISSQLENLTSLDLSENKLNPSSNPS 193
Query: 200 GLP-QLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDN 258
L ++++L LN TG+ W ++ PALEELHL+ N IS + P V N
Sbjct: 194 SLATSFCNLKVLSLNRTGMKWNEILQCASMWPALEELHLVSNDISLL---EQP-VNNLQN 249
Query: 259 LQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIH 306
L +L++ +N I + +++ + + L+Q+ ++ N ++ I +P+ D H
Sbjct: 250 LTILDISNNKIVDGNQLHTIAFLPRLKQVIVSNNIISSISFPDVDFGH 297
Score = 137 (53.3 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 58/209 (27%), Positives = 103/209 (49%)
Query: 223 EILKHSLPALEELHLMGNSISEITPVSSP--IVQGFDNLQLLNLEDNCIAEWSEILKLCQ 280
E L H LE L + S +++ P S+P + F NL++L+L + +W+EIL+
Sbjct: 164 ESLAHISSQLENLTSLDLSENKLNPSSNPSSLATSFCNLKVLSLNRTGM-KWNEILQCAS 222
Query: 281 I-RSLEQLYLNKNNLNRIYYPNND----TI-----HELVSAHESHEESYLPFQNLCCLLL 330
+ +LE+L+L N+++ + P N+ TI +++V ++ H ++LP L +++
Sbjct: 223 MWPALEELHLVSNDISLLEQPVNNLQNLTILDISNNKIVDGNQLHTIAFLP--RLKQVIV 280
Query: 331 GNSKKLPTS-SHVSFV-VYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSENPV 388
N+ S V F I SL +GNN I + I+ L L + NP+
Sbjct: 281 SNNIISSISFPDVDFGHTAMFISLTSLAVNGNN-ISEWCVINELHKLLHLESLNCHGNPL 339
Query: 389 SDPGRGGIS-RFAIIARLGKIKILNGSEV 416
D + + R IIA++ +K LN +E+
Sbjct: 340 MDLDKNPETVRQLIIAKIENLKFLNKTEI 368
Score = 127 (49.8 bits), Expect = 6.6e-05, P = 6.6e-05
Identities = 57/188 (30%), Positives = 91/188 (48%)
Query: 129 SKFEELTSAALPY--LGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
S+ E LTS L L SS +++ T NLK L L + W +I PAL
Sbjct: 171 SQLENLTSLDLSENKLNPSSNPSSLATSFCNLKVLSLNRTGMK-WNEILQCASMWPALEE 229
Query: 187 LNLSNNLMSKEVTGLPQLKSIRIL-VLNCTGVNWMQVEILKHSLPALEELHLMGNSISEI 245
L+L +N +S + L+++ IL + N V+ Q+ + LP L+++ + N IS I
Sbjct: 230 LHLVSNDISLLEQPVNNLQNLTILDISNNKIVDGNQLHTIAF-LPRLKQVIVSNNIISSI 288
Query: 246 T-P-VSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
+ P V F +L L + N I+EW I +L ++ LE L + N L + N +
Sbjct: 289 SFPDVDFGHTAMFISLTSLAVNGNNISEWCVINELHKLLHLESLNCHGNPLMDLD-KNPE 347
Query: 304 TIHELVSA 311
T+ +L+ A
Sbjct: 348 TVRQLIIA 355
>RGD|1305533 [details] [associations]
symbol:Tbce "tubulin folding cofactor E" species:10116 "Rattus
norvegicus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IEA;ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=ISO;ISS] [GO:0007409 "axonogenesis" evidence=ISO]
[GO:0008150 "biological_process" evidence=ND] [GO:0008344 "adult
locomotory behavior" evidence=IEA;ISO] [GO:0009791 "post-embryonic
development" evidence=IEA;ISO] [GO:0014889 "muscle atrophy"
evidence=IEA;ISO] [GO:0048589 "developmental growth"
evidence=IEA;ISO] [GO:0048936 "peripheral nervous system neuron
axonogenesis" evidence=IEA;ISO] InterPro:IPR000938 Pfam:PF01302
RGD:1305533 GO:GO:0005737 GO:GO:0000226 GO:GO:0005856 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706
GO:GO:0014889 GO:GO:0048936 GeneTree:ENSGT00530000063405
GO:GO:0007023 CTD:6905 HOGENOM:HOG000154513 HOVERGEN:HBG084170
OMA:CLRNPLT OrthoDB:EOG41NTKV EMBL:BC089833 IPI:IPI00364903
RefSeq:NP_001012161.1 UniGene:Rn.3547 ProteinModelPortal:Q5FVQ9
SMR:Q5FVQ9 STRING:Q5FVQ9 PhosphoSite:Q5FVQ9 PRIDE:Q5FVQ9
Ensembl:ENSRNOT00000040743 GeneID:361255 KEGG:rno:361255
UCSC:RGD:1305533 InParanoid:Q5FVQ9 NextBio:675707
Genevestigator:Q5FVQ9 GermOnline:ENSRNOG00000029667 Uniprot:Q5FVQ9
Length = 524
Score = 361 (132.1 bits), Expect = 4.2e-33, P = 4.2e-33
Identities = 100/307 (32%), Positives = 153/307 (49%)
Query: 1 MNDCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGV 59
M+D P +G+RV + TV++ G V +G WLGV+WD GKHDGS G
Sbjct: 1 MSDILPLDV-IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGT 56
Query: 60 RYFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELV 119
YF+ + GSFVR + ++ G AL+ RY +++++ L +K V + +
Sbjct: 57 MYFKCRHPTGGSFVRPNIVNFGEDFLTALKKRYVLTDGPDDDEKSCSLKVGSKQV--QTI 114
Query: 120 GKDKIQDKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAF 177
G + I K S+ L +L VS G I N++ +DL+ NLLS W ++
Sbjct: 115 GFEHITKKQSQLRSLQDISLWKCAVSCAGERGRIAEACPNIRVVDLSKNLLSTWDEVILI 174
Query: 178 GEQLPALAVLNLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEE 234
EQL L L+LS N + S T +++ LVLN TG+ W +V S P L+E
Sbjct: 175 AEQLKDLEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLQE 234
Query: 235 LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNL 294
L+L N IS +S V NL+LL+L N + S++ + + LE L L+ L
Sbjct: 235 LYLKSNGIS----ISERPVNALQNLRLLDLSSNPSIDESQLCLIAYLPRLEHLLLSDIGL 290
Query: 295 NRIYYPN 301
+ I++P+
Sbjct: 291 SSIHFPD 297
Score = 124 (48.7 bits), Expect = 0.00014, P = 0.00014
Identities = 58/225 (25%), Positives = 105/225 (46%)
Query: 206 SIRILVLNCTGVN-WMQVEILKHSLPALEELHLMGNSISEITPVSSP-IVQGFDNLQLLN 263
+IR++ L+ ++ W +V ++ L LE L L N + P SP + + F L+ L
Sbjct: 154 NIRVVDLSKNLLSTWDEVILIAEQLKDLEALDLSENKLQ--FPSDSPTLTRTFSTLKTLV 211
Query: 264 LEDNCIAEWSEILKLCQIRS-LEQLYLNKNNLNRIYYPNN--DTIHEL-VSAHESHEES- 318
L I W+E+L L++LYL N ++ P N + L +S++ S +ES
Sbjct: 212 LNKTGIT-WTEVLHCAPSWPVLQELYLKSNGISISERPVNALQNLRLLDLSSNPSIDESQ 270
Query: 319 -----YLP-FQNLCCLLLG-NSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDS 371
YLP ++L +G +S P + F + + +N I + + I+
Sbjct: 271 LCLIAYLPRLEHLLLSDIGLSSIHFPDAEIGCKTSMFPALTYLI--VNDNQISEWSFINE 328
Query: 372 LDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
LD L + + NP++ +G + IIA++G++K LN ++
Sbjct: 329 LDKLQSLQALSCARNPLT---KGDKAEEIIIAKIGQLKTLNRCQI 370
>MGI|MGI:1917680 [details] [associations]
symbol:Tbce "tubulin-specific chaperone E" species:10090
"Mus musculus" [GO:0000226 "microtubule cytoskeleton organization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006457 "protein folding"
evidence=TAS] [GO:0007021 "tubulin complex assembly" evidence=TAS]
[GO:0007023 "post-chaperonin tubulin folding pathway" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0008344 "adult
locomotory behavior" evidence=IMP] [GO:0009791 "post-embryonic
development" evidence=IMP] [GO:0014889 "muscle atrophy"
evidence=IMP] [GO:0048589 "developmental growth" evidence=IMP]
[GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IMP] [GO:0051082 "unfolded protein binding" evidence=TAS]
InterPro:IPR000938 MGI:MGI:1917680 Pfam:PF01302 GO:GO:0005737
GO:GO:0000226 GO:GO:0005856 GO:GO:0051082 GO:GO:0008344
GO:GO:0009791 GO:GO:0048589 GO:GO:0007021 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 CTD:6905
HOGENOM:HOG000154513 HOVERGEN:HBG084170 OMA:CLRNPLT
OrthoDB:EOG41NTKV EMBL:AY082332 EMBL:AK167383 EMBL:BC050206
IPI:IPI00229931 RefSeq:NP_848027.1 UniGene:Mm.260209 PDB:1WJN
PDBsum:1WJN ProteinModelPortal:Q8CIV8 SMR:Q8CIV8 STRING:Q8CIV8
PhosphoSite:Q8CIV8 PaxDb:Q8CIV8 PRIDE:Q8CIV8
Ensembl:ENSMUST00000039894 GeneID:70430 KEGG:mmu:70430
UCSC:uc007pmq.1 InParanoid:Q8CIV8 EvolutionaryTrace:Q8CIV8
NextBio:331607 Bgee:Q8CIV8 CleanEx:MM_TBCE Genevestigator:Q8CIV8
GermOnline:ENSMUSG00000039233 Uniprot:Q8CIV8
Length = 524
Score = 355 (130.0 bits), Expect = 2.2e-32, P = 2.2e-32
Identities = 99/307 (32%), Positives = 152/307 (49%)
Query: 1 MNDCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGV 59
M+D P +G+RV + TV++ G V +G WLGV+WD GKHDGS G
Sbjct: 1 MSDILPLDV-IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGT 56
Query: 60 RYFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELV 119
YF+ + GSFVR ++ G AL+ RY E ++++ L +K V + +
Sbjct: 57 MYFKCRHPTGGSFVRPSKVNFGDDFLTALKKRYVLEDGPDDDENSCSLKVGSKQV--QTI 114
Query: 120 GKDKIQDKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAF 177
G + I K S+ L +L VS G I N++ ++L+ NLLS W ++
Sbjct: 115 GFEHITKKQSQLRALQDISLWNCAVSHAGEQGRIAEACPNIRVVNLSKNLLSTWDEVVLI 174
Query: 178 GEQLPALAVLNLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEE 234
EQL L L+LS N + S T +++ LVLN TG+ W +V S P LEE
Sbjct: 175 AEQLKDLEALDLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLEE 234
Query: 235 LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNL 294
L+L N+IS +S V ++LL+L N + S++ + + LE L L+ L
Sbjct: 235 LYLKSNNIS----ISERPVNVLQKMRLLDLSSNPSIDESQLSLIADLPRLEHLVLSDIGL 290
Query: 295 NRIYYPN 301
+ I++P+
Sbjct: 291 SSIHFPD 297
>UNIPROTKB|B7Z3P1 [details] [associations]
symbol:TBCE "cDNA FLJ59210, highly similar to
Tubulin-specific chaperone E" species:9606 "Homo sapiens"
[GO:0003735 "structural constituent of ribosome" evidence=IEA]
[GO:0005840 "ribosome" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] InterPro:IPR000938 InterPro:IPR001931 Pfam:PF01249
Pfam:PF01302 GO:GO:0006412 GO:GO:0005840 GO:GO:0003735
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 HOVERGEN:HBG084170 OMA:CLRNPLT EMBL:AL357556
EMBL:AL672237 UniGene:Hs.740537 HGNC:HGNC:11582 EMBL:AK296185
IPI:IPI00922443 SMR:B7Z3P1 STRING:B7Z3P1 Ensembl:ENST00000543662
UCSC:uc010pxr.1 Uniprot:B7Z3P1
Length = 578
Score = 337 (123.7 bits), Expect = 5.2e-30, P = 5.2e-30
Identities = 116/433 (26%), Positives = 200/433 (46%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKS 69
+G+RV N TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVE-VNGEH--ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G + N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEIL----KHSLPALEELH-LM 238
N+S N + +TG L +++LVLN TG+ W + +H L ++ +
Sbjct: 185 NVSENKLKFPSGSVLTGT--LSVLKVLVLNQTGITWAEAHAQCGGSRHGLDMQKDASKFV 242
Query: 239 GNSISEITPVSSPIVQGFDNLQL-LNLED--NCIAEWSEILKLCQIRSLEQLYLNKNNLN 295
+ + S+ I+ D+ + +N+ C+A C LE+LYL NN+
Sbjct: 243 DLCVLQKCSTSNCIISAKDHTSMRMNVAKVLRCVAG-------CP--GLEELYLESNNIF 293
Query: 296 RIYYPNN--DTI-------HELVSAHESHEESYLP-FQNLCCLLLG-NSKKLPTSSHVSF 344
P + T+ ++L+ ++ + ++LP + L G +S P +
Sbjct: 294 ISERPTDVLQTVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPDAGIGCK 353
Query: 345 VVYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGG-ISRFAIIA 403
F + + +N I + + L+ P L + NP++ + +R IIA
Sbjct: 354 TSMFPSLKYLV--VNDNQISQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIA 411
Query: 404 RLGKIKILNGSEV 416
+G++K LN E+
Sbjct: 412 SIGQLKTLNKCEI 424
>DICTYBASE|DDB_G0269990 [details] [associations]
symbol:tbcE "tubulin binding cofactor E"
species:44689 "Dictyostelium discoideum" [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
dictyBase:DDB_G0269990 Pfam:PF01302 GO:GO:0005737 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005856 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799 RefSeq:XP_646451.1
HSSP:Q8CI96 ProteinModelPortal:Q55CN0 EnsemblProtists:DDB0266639
GeneID:8617411 KEGG:ddi:DDB_G0269990 OMA:LVWETGE Uniprot:Q55CN0
Length = 525
Score = 252 (93.8 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 60/193 (31%), Positives = 105/193 (54%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQAK 65
E + +G+RV D +GT++Y G+V G+ G W G++WD GKH G++ G +YF+
Sbjct: 11 EYFYIGERVKG--DDGSVGTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFKCI 68
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNK-HVSIELVGKDKI 124
++ SGSF++ L G + +++ ++ + + D++YV S + I+++G ++
Sbjct: 69 NKGSGSFMKYEKLIKGETFMKSISDKFHQKI--DNYDDLYVDSTKEDIKIQIQMIGMNQT 126
Query: 125 QDKFSKFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLP 182
++ KF T + YL +S + I NL EL+L+ LL+ W I +QLP
Sbjct: 127 RENQKKFIAQTLLSASYLPISEIDESPLIYNNFKNLIELNLSNCLLNSWTQIVKLLKQLP 186
Query: 183 ALAVLNLSNNLMS 195
L L+L NN +S
Sbjct: 187 NLNRLHLCNNRLS 199
Score = 81 (33.6 bits), Expect = 2.3e-23, Sum P(2) = 2.3e-23
Identities = 31/103 (30%), Positives = 50/103 (48%)
Query: 202 PQLKSIRILVLNCTGVNWMQVEILKH--SLPALEELHLMGNSISEITPVSSPIVQG---- 255
P LKS+ + N N +IL +LP L EL+L N I++I + + G
Sbjct: 299 PTLKSLDLANNNIKSFN----DILSSLGNLPQLTELNLNNNQITDIE-FNGDVDDGNKSN 353
Query: 256 ------FDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKN 292
F NL+ + L +N I +W + KL +++SL++L N
Sbjct: 354 NGKTNQFKNLKRIYLSNNKINDWKYLDKLDELQSLDELSFRNN 396
Score = 56 (24.8 bits), Expect = 9.4e-21, Sum P(2) = 9.4e-21
Identities = 11/31 (35%), Positives = 15/31 (48%)
Query: 360 NNMIEDLASIDSLDSFPKLMDIRLSENPVSD 390
NN I D +D LD L ++ NP+ D
Sbjct: 370 NNKINDWKYLDKLDELQSLDELSFRNNPIVD 400
>WB|WBGene00019503 [details] [associations]
symbol:K07H8.1 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0008340 GO:GO:0009792
GO:GO:0071688 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00530000063405 OMA:CLRNPLT EMBL:FO081300 PIR:T16278
PIR:T33025 RefSeq:NP_501395.1 ProteinModelPortal:Q20068 SMR:Q20068
STRING:Q20068 PaxDb:Q20068 EnsemblMetazoa:K07H8.1 GeneID:177624
KEGG:cel:CELE_K07H8.1 UCSC:K07H8.1 CTD:177624 WormBase:K07H8.1
HOGENOM:HOG000016489 InParanoid:Q20068 NextBio:897660
Uniprot:Q20068
Length = 493
Score = 271 (100.5 bits), Expect = 2.7e-21, P = 2.7e-21
Identities = 87/271 (32%), Positives = 131/271 (48%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGY-SGTWLGVDWDYGN-GKHDGSINGVRYFQAKSQ 67
++GQRV + + TV+Y+GEV GY S W+G++WD GKHDG + G RYFQ +
Sbjct: 2 EIGQRVRINFE---VATVRYIGEVDGYGSQRWVGLEWDDPTRGKHDGIVRGKRYFQTRHP 58
Query: 68 KSGSFVRVHNLSPG-ISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQD 126
GS ++ H + P L ++ RY E S E E E L+ SNK IEL+G D+
Sbjct: 59 NGGSLMK-HEIVPKPTDLLFEIKDRYIEEESVETEIE---LAQSNK--KIELIGMDQTAA 112
Query: 127 KFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAV 186
K S E+L + L V P ++ +EL+L GNLL WK + E P +
Sbjct: 113 KQSNIEKLINIVLDNRSVGFPPSSDSPQFILCRELNLYGNLLYKWKTVRQILEYFPRIQE 172
Query: 187 LNLSNNLMS--------KEVTGLPQL--KSIRILVLNCTGVNWMQVEILKHSLPALEELH 236
LNL N M E G + S + LV++ ++ ++ + P+ ++
Sbjct: 173 LNLRRNRMQCFNEEEDDDESEGDDHVYSDSCKKLVISECNLSENSIDSILLRFPSTSDVV 232
Query: 237 LMGNSISEITPVSSPIVQGFDNLQLLNLEDN 267
GN ++ + VS + L L+LEDN
Sbjct: 233 AFGNDLTRFS-VSEAVSS---RLTSLDLEDN 259
>UNIPROTKB|G4NCM1 [details] [associations]
symbol:MGG_00378 "Tubulin-specific chaperone E"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR001611 InterPro:IPR000938 PROSITE:PS51450
Pfam:PF01302 EMBL:CM001235 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
RefSeq:XP_003718699.1 ProteinModelPortal:G4NCM1
EnsemblFungi:MGG_00378T0 GeneID:2674874 KEGG:mgr:MGG_00378
Uniprot:G4NCM1
Length = 616
Score = 271 (100.5 bits), Expect = 5.3e-21, P = 5.3e-21
Identities = 96/310 (30%), Positives = 153/310 (49%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQ--A 64
++++GQR+ S + A + T++++G+V G SGTWLGV+WD GKHDG GVRYF +
Sbjct: 4 THQVGQRL-SFDGA--LCTIRFIGDVAGTSGTWLGVEWDDPSRGKHDGCHKGVRYFACLS 60
Query: 65 KSQKSGSFVRVHNLS-PGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDK 123
+S + SFVR S P S EA+R +Y E + + S K V+ E VG DK
Sbjct: 61 RSPTAASFVRPTRPSDPPRSFIEAVRDKYADEPVGDAASRPKEIVISGK-VAEE-VGFDK 118
Query: 124 IQDKFSKFEELT-----SAALPYLGVSSP----GANIGTIVT--NLKELDLTGNLLSDWK 172
I+ + ++ ELT A + + VSSP GA+ T + ELD++ NL+SD
Sbjct: 119 IRRRMAQLHELTIIIVDGARISF--VSSPDGSSGADCSVKETCPRIVELDISRNLISDMS 176
Query: 173 DIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGV----NWMQVEILKHS 228
+ QL L L L+ N + PQL S + ++ N T + + E +
Sbjct: 177 TVVDICSQLSDLRNLRLNGNRFWNVLDKSPQLASAKDVLGNITELAIDETLLSWEEICQI 236
Query: 229 LPALEELHLMGNSISEITPVSSPIVQGFD-NLQLLNLEDNCIAEWSEILKLCQIRSLEQL 287
L + +++++ + +P +L L+LE N S++ L + SL L
Sbjct: 237 TSWFGSLQNLSCDLNQLSSIPAPFPATMSQSLTTLSLEFNEFGSLSDLAPLATLSSLRNL 296
Query: 288 YLNKNNLNRI 297
L NN++ +
Sbjct: 297 ILKGNNISTV 306
>SGD|S000000809 [details] [associations]
symbol:PAC2 "Microtubule effector required for tubulin
heterodimer formation" species:4932 "Saccharomyces cerevisiae"
[GO:0006457 "protein folding" evidence=IGI;ISS] [GO:0007021
"tubulin complex assembly" evidence=IGI] [GO:0072668 "tubulin
complex biogenesis" evidence=IMP] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0043014 "alpha-tubulin binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR000938 SGD:S000000809 Pfam:PF01302
GO:GO:0005737 GO:GO:0006457 EMBL:BK006939 EMBL:U18778 GO:GO:0005874
GO:GO:0007021 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:U16814 PIR:S50465 RefSeq:NP_010922.1 ProteinModelPortal:P39937
SMR:P39937 DIP:DIP-2342N IntAct:P39937 MINT:MINT-475566
STRING:P39937 PaxDb:P39937 EnsemblFungi:YER007W GeneID:856724
KEGG:sce:YER007W CYGD:YER007w GeneTree:ENSGT00530000063405
OMA:AYGVEWD NextBio:982823 Genevestigator:P39937 GermOnline:YER007W
Uniprot:P39937
Length = 518
Score = 217 (81.4 bits), Expect = 6.1e-15, P = 6.1e-15
Identities = 84/308 (27%), Positives = 149/308 (48%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGY-SGTWLGVDWD-YGNGKHDGSINGVRYFQAK 65
+Y++G R+ T+K++G ++ + S GV+WD + GKH G+I+ + YF +
Sbjct: 2 TYEIGDRLKIGG---YFCTIKFIGVIKPWPSVKAYGVEWDDHSRGKHSGTIDDIHYFDVQ 58
Query: 66 SQKSGSFVRVHNL-SPG---ISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGK 121
SGSF++ + SPG I+ EAL +Y G S+ + LS NK V E +G
Sbjct: 59 IPNSGSFLKESKIKSPGVRRITFYEALSEKYGGSSNNIND-----LSIGNKRV--EGLGF 111
Query: 122 DKIQDKFSKFEELTSAALPYLGVSSPGAN---IGTIV---TNLKELDLTGNLLSDWKDIG 175
D++ + +++L AL V+ N + ++ N+K+LDL+ NL ++ +
Sbjct: 112 DELNARNKNYKKLRKIALRDSDVAILFQNQDELNRVIQNCVNVKDLDLSLNLFTNINSLC 171
Query: 176 AFGEQLPALAVLNLSNNLMSKEVTGLPQ--LKSIRILVLNCTGVNWMQVEILKHSLPALE 233
F E L L LN+S N + L + L I+ L L+ G+++ + L S L+
Sbjct: 172 EFIEPLKNLESLNISQNKLLSGWDNLKEYDLSHIKTLRLSSCGLSYKHIGKLLKSFRTLK 231
Query: 234 ELHLMGNSISEITPVSSPIVQGFDN-----LQLLNLEDNCIAEWSEILKLCQIRSLEQLY 288
L L N+++ S +Q F+N L+ LN+ N + + K ++ L
Sbjct: 232 MLDLSYNNLT------SAGIQNFENEIPCTLEELNISGNNLISFPLFPKNLTLKGLN--- 282
Query: 289 LNKNNLNR 296
++ N ++R
Sbjct: 283 VSNNQISR 290
>MGI|MGI:1925543 [details] [associations]
symbol:Tbcel "tubulin folding cofactor E-like" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] MGI:MGI:1925543
Prosite:PS00299 GO:GO:0005829 GO:GO:0005856 PROSITE:PS50053
eggNOG:NOG245706 Reactome:REACT_24972 GeneTree:ENSGT00530000063405
CTD:219899 HOGENOM:HOG000004866 HOVERGEN:HBG082881 OMA:GLHSWED
OrthoDB:EOG476K06 EMBL:AK052261 EMBL:AK077017 EMBL:BC139386
EMBL:BC139387 IPI:IPI00226110 IPI:IPI00226608 RefSeq:NP_766626.1
UniGene:Mm.34483 ProteinModelPortal:Q8C5W3 SMR:Q8C5W3
PhosphoSite:Q8C5W3 PaxDb:Q8C5W3 PRIDE:Q8C5W3
Ensembl:ENSMUST00000066148 Ensembl:ENSMUST00000066179
Ensembl:ENSMUST00000125995 Ensembl:ENSMUST00000128959
Ensembl:ENSMUST00000138506 GeneID:272589 KEGG:mmu:272589
UCSC:uc009paw.1 InParanoid:Q8C5W3 NextBio:393606 Bgee:Q8C5W3
CleanEx:MM_TBCEL Genevestigator:Q8C5W3
GermOnline:ENSMUSG00000037287 Uniprot:Q8C5W3
Length = 424
Score = 211 (79.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 64/189 (33%), Positives = 96/189 (50%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEV-- 198
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N +S V
Sbjct: 59 GITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSNPLSLSVLE 118
Query: 199 -TGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
T +R LVLN + +W V + LP LEEL L +++ VS P V
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHTILQELPELEELFLC---LNDYETVSCPSVC-CH 174
Query: 258 NLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHEL------VS 310
+L+LL++ DN + +W+EI KL SL+ L L N+LN I P D++ L +S
Sbjct: 175 SLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPA-DSLARLFPNLRSIS 233
Query: 311 AHESHEESY 319
H+S +S+
Sbjct: 234 LHKSGLQSW 242
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 58/211 (27%), Positives = 98/211 (46%)
Query: 218 NWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK 277
+W +V + ++P LE L+L N +S ++ + F ++ L L +N A W +
Sbjct: 88 DWHEVSKIVSNVPQLEFLNLSSNPLS-LSVLERTCAGSFSGVRKLVL-NNSKASWETVHT 145
Query: 278 LCQ-IRSLEQLYLNKNNLNRIYYPNNDTIHELVSAH--ESHEESY-------LPFQNLCC 327
+ Q + LE+L+L N+ + P+ H L H +++ + + + F +L
Sbjct: 146 ILQELPELEELFLCLNDYETVSCPSV-CCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDT 204
Query: 328 LLLGNSKKLPTSSHVSFVVYFL--IFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSE 385
L+L N+ + + + SLH SG ED ID L+SFPKL ++RL
Sbjct: 205 LVLANNHLNAIEEPADSLARLFPNLRSISLHKSGLQSWED---IDKLNSFPKLEEVRLLG 261
Query: 386 NPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
P+ P R ++ARL + LNGS V
Sbjct: 262 IPLLQPYTTEERRKLVVARLPSVSKLNGSVV 292
Score = 118 (46.6 bits), Expect = 0.00047, P = 0.00047
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 107 LSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGN 166
L +N S E V I + + EEL Y VS P +LK L +T N
Sbjct: 131 LVLNNSKASWETV--HTILQELPELEELFLCLNDYETVSCPSV----CCHSLKLLHITDN 184
Query: 167 LLSDWKDIGAFGEQLPALAVLNLSNNLMS---KEVTGLPQL-KSIRILVLNCTGV-NWMQ 221
L DW +I G P+L L L+NN ++ + L +L ++R + L+ +G+ +W
Sbjct: 185 NLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPADSLARLFPNLRSISLHKSGLQSWED 244
Query: 222 VEILKHSLPALEELHLMG 239
++ L +S P LEE+ L+G
Sbjct: 245 IDKL-NSFPKLEEVRLLG 261
>UNIPROTKB|Q5QJ74 [details] [associations]
symbol:TBCEL "Tubulin-specific chaperone cofactor E-like
protein" species:9606 "Homo sapiens" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
Prosite:PS00299 GO:GO:0005737 EMBL:CH471065 GO:GO:0005856
InterPro:IPR019955 PROSITE:PS50053 eggNOG:NOG245706 EMBL:AY398644
EMBL:AK295673 EMBL:BC120988 IPI:IPI00166956 RefSeq:NP_001123519.1
RefSeq:NP_689928.3 UniGene:Hs.504136 ProteinModelPortal:Q5QJ74
SMR:Q5QJ74 STRING:Q5QJ74 PhosphoSite:Q5QJ74 DMDM:215273924
PRIDE:Q5QJ74 Ensembl:ENST00000422003 Ensembl:ENST00000529397
GeneID:219899 KEGG:hsa:219899 UCSC:uc001pxo.3 CTD:219899
GeneCards:GC11P120894 H-InvDB:HIX0010204 HGNC:HGNC:28115
HPA:HPA038593 MIM:610451 neXtProt:NX_Q5QJ74 PharmGKB:PA162405374
HOGENOM:HOG000004866 HOVERGEN:HBG082881 InParanoid:Q5QJ74
OMA:GLHSWED OrthoDB:EOG476K06 ChiTaRS:TBCEL GenomeRNAi:219899
NextBio:90838 ArrayExpress:Q5QJ74 Bgee:Q5QJ74 CleanEx:HS_TBCEL
Genevestigator:Q5QJ74 GermOnline:ENSG00000154114 Uniprot:Q5QJ74
Length = 424
Score = 211 (79.3 bits), Expect = 1.7e-14, P = 1.7e-14
Identities = 62/189 (32%), Positives = 98/189 (51%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEV-- 198
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N ++ V
Sbjct: 59 GITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLE 118
Query: 199 -TGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
T +R LVLN + +W V ++ LP LEEL L +++ VS P +
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLC---LNDYETVSCPSIC-CH 174
Query: 258 NLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHEL------VS 310
+L+LL++ DN + +W+EI KL SL+ L L N+LN I P+ D++ L +S
Sbjct: 175 SLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEPD-DSLARLFPNLRSIS 233
Query: 311 AHESHEESY 319
H+S +S+
Sbjct: 234 LHKSGLQSW 242
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 55/211 (26%), Positives = 100/211 (47%)
Query: 218 NWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK 277
+W +V + ++P LE L+L N ++ ++ + F ++ L L +N A W +
Sbjct: 88 DWHEVSKIVSNVPQLEFLNLSSNPLN-LSVLERTCAGSFSGVRKLVL-NNSKASWETVHM 145
Query: 278 LCQ-IRSLEQLYLNKNNLNRIYYPNNDTIHELVSAH--ESHEESYLPFQNLCCLLLGNSK 334
+ Q + LE+L+L N+ + P+ H L H +++ + + + L +
Sbjct: 146 ILQELPDLEELFLCLNDYETVSCPSI-CCHSLKLLHITDNNLQDWTEIRKLGVMFPSLDT 204
Query: 335 KLPTSSHVSFV---------VYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSE 385
+ ++H++ + ++ + + SLH SG ED ID L+SFPKL ++RL
Sbjct: 205 LVLANNHLNAIEEPDDSLARLFPNLRSISLHKSGLQSWED---IDKLNSFPKLEEVRLLG 261
Query: 386 NPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
P+ P R +IARL + LNGS V
Sbjct: 262 IPLLQPYTTEERRKLVIARLPSVSKLNGSVV 292
>RGD|1308880 [details] [associations]
symbol:Tbcel "tubulin folding cofactor E-like" species:10116
"Rattus norvegicus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] RGD:1308880
Prosite:PS00299 GO:GO:0005737 GO:GO:0005856 InterPro:IPR019955
PROSITE:PS50053 eggNOG:NOG245706 GeneTree:ENSGT00530000063405
CTD:219899 HOGENOM:HOG000004866 HOVERGEN:HBG082881
OrthoDB:EOG476K06 EMBL:BC087163 IPI:IPI00778732
RefSeq:NP_001014111.1 UniGene:Rn.214544 ProteinModelPortal:Q5PQJ7
Ensembl:ENSRNOT00000059951 GeneID:315591 KEGG:rno:315591
UCSC:RGD:1308880 InParanoid:Q5PQJ7 NextBio:669456
Genevestigator:Q5PQJ7 GermOnline:ENSRNOG00000032364 Uniprot:Q5PQJ7
Length = 424
Score = 210 (79.0 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 64/189 (33%), Positives = 96/189 (50%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEV-- 198
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N +S V
Sbjct: 59 GITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSNPLSLSVLE 118
Query: 199 -TGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
T +R LVLN + +W V + LP LEEL L +++ VS P V
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHTILQELPDLEELFLC---LNDYETVSCPSVC-CH 174
Query: 258 NLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHEL------VS 310
+L+LL++ DN + EW+EI KL SL+ L L N++N I P D++ L +S
Sbjct: 175 SLKLLHITDNNLQEWTEIRKLGVMFPSLDTLVLANNHVNAIEEPA-DSLARLFPNLRSIS 233
Query: 311 AHESHEESY 319
H+S +S+
Sbjct: 234 LHKSGLQSW 242
Score = 153 (58.9 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 56/211 (26%), Positives = 100/211 (47%)
Query: 218 NWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK 277
+W +V + ++P LE L+L N +S ++ + F ++ L L +N A W +
Sbjct: 88 DWHEVSKIVSNVPQLEFLNLSSNPLS-LSVLERTCAGSFSGVRKLVL-NNSKASWETVHT 145
Query: 278 LCQ-IRSLEQLYLNKNNLNRIYYPNNDTIHELVSAH--ESHEESYLPFQNLCCLLLGNSK 334
+ Q + LE+L+L N+ + P+ H L H +++ + + + L +
Sbjct: 146 ILQELPDLEELFLCLNDYETVSCPSV-CCHSLKLLHITDNNLQEWTEIRKLGVMFPSLDT 204
Query: 335 KLPTSSHVSFV---------VYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSE 385
+ ++HV+ + ++ + + SLH SG ED ID L+SFPKL ++RL
Sbjct: 205 LVLANNHVNAIEEPADSLARLFPNLRSISLHKSGLQSWED---IDKLNSFPKLEEVRLLG 261
Query: 386 NPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
P+ P R ++ARL + LNGS V
Sbjct: 262 IPLLQPYTTEERRKLVVARLPSVSKLNGSVV 292
>CGD|CAL0005987 [details] [associations]
symbol:orf19.2921 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR000938
PROSITE:PS51450 CGD:CAL0005987 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 eggNOG:NOG245706
InterPro:IPR025875 Pfam:PF12799 EMBL:AACQ01000084
RefSeq:XP_715575.1 ProteinModelPortal:Q5A198 STRING:Q5A198
GeneID:3642819 KEGG:cal:CaO19.2921 Uniprot:Q5A198
Length = 502
Score = 209 (78.6 bits), Expect = 4.6e-14, P = 4.6e-14
Identities = 78/301 (25%), Positives = 140/301 (46%)
Query: 9 YKLGQRVHSANDARRIGTVKYVGE--VQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQAK 65
Y L RV + ++ +GT++Y+G V G + LG++WD GK++G +NG++YF K
Sbjct: 5 YSLNDRVSTIDNY--LGTIRYIGNLPVWGTNTVALGIEWDDPSRGKNNGDLNGIQYFTPK 62
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQ 125
SG+F++ N S +++ + E+ + E + + K ++E +G DK+
Sbjct: 63 VTGSGTFIKSSNRSLNHIRKSFVQIIH--ENYLDTEYKTKNIQFGIK--TVEELGWDKLN 118
Query: 126 DKFSKFEELTSAALPYLGVS-----SPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ 180
S L S L Y ++ + + + NL L+L+ NL +D +I +
Sbjct: 119 KFHSNLRNLDSLTLDYCLINIAYHDNEDKQLFDELVNLTNLELSCNLFTDVNEICKIIDN 178
Query: 181 LPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
+P+L LN++ N S+ I L L+ T ++ +E L P L+EL++ GN
Sbjct: 179 IPSLTSLNINGNRFSQFSQEQRTHNGIVSLKLSSTMMSTSMLEKLIKKFPNLKELYISGN 238
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYP 300
+ + + L +L+L N + E IL L +L YL+ + + P
Sbjct: 239 NYCNADIENMNLNMP---LTILDLSYNRL-EHMPILPLVSALNLSHNYLSLQIIKGTF-P 293
Query: 301 N 301
N
Sbjct: 294 N 294
>ASPGD|ASPL0000026995 [details] [associations]
symbol:AN5531 species:162425 "Emericella nidulans"
[GO:0006457 "protein folding" evidence=IEA] [GO:0007021 "tubulin
complex assembly" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] InterPro:IPR000938 Pfam:PF01302
EMBL:BN001305 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 eggNOG:NOG245706 OrthoDB:EOG4WWVTT
EMBL:AACD01000094 RefSeq:XP_663135.1 ProteinModelPortal:Q5B1P9
EnsemblFungi:CADANIAT00003551 GeneID:2871821 KEGG:ani:AN5531.2
HOGENOM:HOG000191667 Uniprot:Q5B1P9
Length = 606
Score = 187 (70.9 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 81/259 (31%), Positives = 124/259 (47%)
Query: 26 TVKYVGEVQGYSGTWLGVDWDYGN-GKHDGSINGVRYFQA--KSQKSGSFVRVHNL--SP 80
T++YVG+V G SG WLGV+WD GKH G NGVRYF+ +GSFVR SP
Sbjct: 26 TIRYVGKVDGTSGEWLGVEWDDPTRGKHSGQHNGVRYFRCLRNHPTAGSFVRPSRPADSP 85
Query: 81 GISLPEALRVRYRG--ESSKEEE---DEMYVLSASNKHVSIELVGKDKIQDKFSKFEELT 135
S EA+R +Y E S+E + D + K E VG DKI+ + ++ EEL
Sbjct: 86 R-SFLEAVREKYASDFEQSRERQARPDAEFEEPIRFKSKIAEEVGFDKIRKQLAELEELK 144
Query: 136 SAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMS 195
L G V L + + + + + G P + L+LS N+++
Sbjct: 145 IVLLD-----------GLRVAGLLAQEASREQVEEAR--GQIERTCPKIVELDLSWNMLT 191
Query: 196 K--EVTGLPQ-LKSIRILVLNCTGVNWMQVEI-LKHSLPALEELHLMGNSISEITPVSSP 251
K +V+ + + L+ + +L LN G + VE L+ ++ELHL +++ +S
Sbjct: 192 KWRDVSDICRPLRRLSLLKLN--GNRFEPVEEGLRFD--GIKELHL-DDTLLPWEQISRV 246
Query: 252 IVQGFDNLQLLNLEDNCIA 270
Q F +L L+ N I+
Sbjct: 247 AAQ-FPSLTWLSASANQIS 264
Score = 150 (57.9 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 57/195 (29%), Positives = 92/195 (47%)
Query: 117 ELVGKDKIQDKFSKFEELTSAALPYL---GVSSPGAN----------IGTIVTNLKELDL 163
E VG DKI+ + ++ EEL L L G+ + A+ I + ELDL
Sbjct: 126 EEVGFDKIRKQLAELEELKIVLLDGLRVAGLLAQEASREQVEEARGQIERTCPKIVELDL 185
Query: 164 TGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVE 223
+ N+L+ W+D+ L L++L L+ N GL + I+ L L+ T + W Q+
Sbjct: 186 SWNMLTKWRDVSDICRPLRRLSLLKLNGNRFEPVEEGL-RFDGIKELHLDDTLLPWEQIS 244
Query: 224 ILKHSLPALEELHLMGNSISEI-TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIR 282
+ P+L L N IS + TP+S+ I+ L L++N I S I L ++
Sbjct: 245 RVAAQFPSLTWLSASANQISMVRTPISNTIIT-------LILDNNEIGSLSSIRALTSLQ 297
Query: 283 SLEQLYLNKNNLNRI 297
+LE L L N ++ +
Sbjct: 298 NLEHLSLRGNCIDAV 312
>UNIPROTKB|F1RGX1 [details] [associations]
symbol:TBCE "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048936 "peripheral nervous system neuron axonogenesis"
evidence=IEA] [GO:0048589 "developmental growth" evidence=IEA]
[GO:0014889 "muscle atrophy" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0008344 "adult
locomotory behavior" evidence=IEA] [GO:0007023 "post-chaperonin
tubulin folding pathway" evidence=IEA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0000226 GO:GO:0008344 GO:GO:0009791
GO:GO:0048589 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0014889 GO:GO:0048936
GeneTree:ENSGT00530000063405 GO:GO:0007023 EMBL:CU468332
Ensembl:ENSSSCT00000011118 OMA:KLPSILY Uniprot:F1RGX1
Length = 102
Score = 158 (60.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 34/88 (38%), Positives = 49/88 (55%)
Query: 38 GTWLGVDWDYGN-GKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISLPEALRVRYRGES 96
G WLGV+WD GKHDGS G YF+ + GSF+R + ++ G+ A++ RY E
Sbjct: 12 GLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTGGSFIRPNKVNFGVDFLTAIKNRYVLED 71
Query: 97 SKEEEDEMYVLSASNKHVSIELVGKDKI 124
EEE++ + NK V E +G D +
Sbjct: 72 EPEEEEKEQTVIIGNKPV--ETIGFDSV 97
>MGI|MGI:1920564 [details] [associations]
symbol:Lrrc69 "leucine rich repeat containing 69"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1920564 eggNOG:COG4886
InterPro:IPR025875 Pfam:PF12799 HSSP:P21793 EMBL:AK006601
EMBL:AK161371 EMBL:AL772236 IPI:IPI00113010 RefSeq:NP_082775.1
UniGene:Mm.52613 ProteinModelPortal:Q9D9Q0 SMR:Q9D9Q0
PhosphoSite:Q9D9Q0 PRIDE:Q9D9Q0 Ensembl:ENSMUST00000023917
Ensembl:ENSMUST00000108276 GeneID:73314 KEGG:mmu:73314
UCSC:uc008sba.1 CTD:100130742 GeneTree:ENSGT00700000104535
HOGENOM:HOG000007755 HOVERGEN:HBG108103 InParanoid:Q9D9Q0
OMA:NTWLECV OrthoDB:EOG447FVC NextBio:337931 Bgee:Q9D9Q0
Genevestigator:Q9D9Q0 Uniprot:Q9D9Q0
Length = 347
Score = 158 (60.7 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 63/192 (32%), Positives = 97/192 (50%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
N K L L G ++ + + E+LP L L+L NN +SK P+L+++ L L G
Sbjct: 15 NTKILTLNGKRITK---MPSTLEKLPNLKTLDLQNNSISKVC---PELRTLTQLTLLNLG 68
Query: 217 VNWMQV--EILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
N +Q E +K+ L +L+ LHL GN I I P + G L +LNL DN + +
Sbjct: 69 NNHLQEVPEEIKY-LTSLKNLHLFGNRICRIAP---GVFNGLHRLIMLNLNDNRLTSLPQ 124
Query: 275 ILKLCQIRSLEQLYLNKNNLNRIYYPNN-DTIHELVSAHESHEES-YLP-----FQNLCC 327
++ ++RSL L LN+NNL I P ++ L H ++ + Y+P +NL
Sbjct: 125 --EIGRLRSLTYLSLNRNNLTVI--PKELCSLEHLSELHLNYNQIVYIPEEIKFLKNLQQ 180
Query: 328 LLL--GNSKKLP 337
L L N ++LP
Sbjct: 181 LFLVRNNIEELP 192
>ZFIN|ZDB-GENE-030131-9296 [details] [associations]
symbol:tbcb "tubulin folding cofactor B"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-030131-9296
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 CTD:1155 HOVERGEN:HBG003239 HSSP:Q20728
EMBL:BC044438 IPI:IPI00481671 RefSeq:NP_997940.1 UniGene:Dr.860
ProteinModelPortal:Q803K6 SMR:Q803K6 STRING:Q803K6 PRIDE:Q803K6
GeneID:337350 KEGG:dre:337350 InParanoid:Q803K6 NextBio:20812190
ArrayExpress:Q803K6 Bgee:Q803K6 Uniprot:Q803K6
Length = 246
Score = 150 (57.9 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 7 ESYKLGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQA 64
E+ +G R V A +IGTV YVG G W+GV +D GKHDGS+NG RYF+
Sbjct: 159 EAIAVGNRCKVQVPGQATKIGTVMYVGTADFKPGYWVGVKYDEPLGKHDGSVNGKRYFEC 218
Query: 65 KSQKSGSFVRVHNLSPGISLPE 86
+ K G+FV+ ++ G PE
Sbjct: 219 EP-KYGAFVKPLTVTVG-DFPE 238
>MGI|MGI:3045299 [details] [associations]
symbol:Lrrd1 "leucine rich repeats and death domain
containing 1" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS50017 PROSITE:PS51450
MGI:MGI:3045299 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 HSSP:P25147 UniGene:Mm.482273
GeneTree:ENSGT00700000104287 CTD:401387 HOVERGEN:HBG108705
OrthoDB:EOG4K6G5V EMBL:AK029981 EMBL:BC141026 EMBL:BC145170
IPI:IPI00223958 RefSeq:NP_766467.2 ProteinModelPortal:Q8C0R9
SMR:Q8C0R9 PhosphoSite:Q8C0R9 PRIDE:Q8C0R9
Ensembl:ENSMUST00000044039 GeneID:242838 KEGG:mmu:242838
HOGENOM:HOG000060227 InParanoid:B2RU96 OMA:HTIACYL NextBio:385582
Bgee:Q8C0R9 CleanEx:MM_4932412H11RIK Genevestigator:Q8C0R9
Uniprot:Q8C0R9
Length = 853
Score = 155 (59.6 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 64/231 (27%), Positives = 115/231 (49%)
Query: 86 EALRVRYRGESSKEEEDEMY----VLSASNKHVSI---ELVGKDKIQDKF---SKFEELT 135
E L ++ G SS E +++ +L+AS +S EL+ + ++ + + L
Sbjct: 185 EILSLQENGLSSIPLEIQLFHNLKILNASYNEISQIPKELLQLENMRQLLLNSNHIDTLP 244
Query: 136 SAA--LPYLGVSSPGANIGTIV----TNLKELDLTGNLLSDWKDIGAFGEQL---PALAV 186
S L YL S G N+ T + ++LK L + NL ++ + F + L P L
Sbjct: 245 SGLEHLRYLETLSLGKNMLTYIPDSLSSLKNLRIL-NL--EYNQLTIFSKSLCFLPKLNS 301
Query: 187 LNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEIT 246
LNL+ N++ + +LK++ L+++ + ++ VEI + LP ++ELHL N + I
Sbjct: 302 LNLTGNMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQ--LPKIKELHLADNKLEAI- 358
Query: 247 PVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
SP ++ F L+LLNL+ N + + + C +LE L L+ NN+ +
Sbjct: 359 ---SPKIENFKELRLLNLDKNLLQSIPKKISHCV--NLESLSLSDNNIEEL 404
>UNIPROTKB|P25147 [details] [associations]
symbol:inlB "Internalin B" species:169963 "Listeria
monocytogenes EGD-e" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
GenomeReviews:AL591824_GR Gene3D:2.60.40.1220 InterPro:IPR014755
InterPro:IPR013378 InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191
TIGRFAMs:TIGR02543 EMBL:M67471 EMBL:AJ012346 EMBL:AL591975
PIR:AC1129 PIR:C39930 RefSeq:NP_463963.1 PDB:1D0B PDB:1H6T PDB:1M9S
PDB:1OTM PDB:1OTN PDB:1OTO PDB:2UZX PDB:2UZY PDB:2WQU PDB:2WQV
PDB:2WQW PDB:2WQX PDB:2Y5P PDB:2Y5Q PDB:4AW4 PDBsum:1D0B
PDBsum:1H6T PDBsum:1M9S PDBsum:1OTM PDBsum:1OTN PDBsum:1OTO
PDBsum:2UZX PDBsum:2UZY PDBsum:2WQU PDBsum:2WQV PDBsum:2WQW
PDBsum:2WQX PDBsum:2Y5P PDBsum:2Y5Q PDBsum:4AW4
ProteinModelPortal:P25147 SMR:P25147 IntAct:P25147 GeneID:986892
KEGG:lmo:lmo0434 PATRIC:20309923 GenoList:LMO0434 KO:K13731
OMA:KYCLISG ProtClustDB:CLSK2393592 EvolutionaryTrace:P25147
InterPro:IPR025987 Pfam:PF13457 Uniprot:P25147
Length = 630
Score = 148 (57.2 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 49/139 (35%), Positives = 75/139 (53%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
N+ +L L GN L+D K + L L L L N + K+++ L LK ++ L L G
Sbjct: 99 NVTKLFLNGNKLTDIKPLA----NLKNLGWLFLDENKV-KDLSSLKDLKKLKSLSLEHNG 153
Query: 217 VNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEIL 276
++ + L H LP LE L+L N I++IT +S L L+LEDN I S+I+
Sbjct: 154 IS--DINGLVH-LPQLESLYLGNNKITDITVLSR-----LTKLDTLSLEDNQI---SDIV 202
Query: 277 KLCQIRSLEQLYLNKNNLN 295
L + L+ LYL+KN+++
Sbjct: 203 PLAGLTKLQNLYLSKNHIS 221
>UNIPROTKB|Q99426 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9606 "Homo
sapiens" [GO:0005874 "microtubule" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0015630 "microtubule
cytoskeleton" evidence=TAS] [GO:0051084 "'de novo'
posttranslational protein folding" evidence=TAS] [GO:0044267
"cellular protein metabolic process" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_17015 InterPro:IPR000938 Pfam:PF01302
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 GO:GO:0015630
GO:GO:0051084 eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 EMBL:AD001527 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AF013488 EMBL:BT007424
EMBL:BC005969 EMBL:BC052812 EMBL:D49738 IPI:IPI00293126
RefSeq:NP_001272.2 UniGene:Hs.31053 ProteinModelPortal:Q99426
SMR:Q99426 IntAct:Q99426 MINT:MINT-2855745 STRING:Q99426
PhosphoSite:Q99426 DMDM:3023518 OGP:Q99426 PaxDb:Q99426
PeptideAtlas:Q99426 PRIDE:Q99426 DNASU:1155 Ensembl:ENST00000221855
GeneID:1155 KEGG:hsa:1155 UCSC:uc002odg.1 GeneCards:GC19P036605
HGNC:HGNC:1989 HPA:HPA041428 HPA:HPA041722 MIM:601303
neXtProt:NX_Q99426 PharmGKB:PA162405357 InParanoid:Q99426
PhylomeDB:Q99426 ChiTaRS:TBCB GenomeRNAi:1155 NextBio:4796
ArrayExpress:Q99426 Bgee:Q99426 CleanEx:HS_TBCB
Genevestigator:Q99426 GermOnline:ENSG00000105254 Uniprot:Q99426
Length = 244
Score = 139 (54.0 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 34/81 (41%), Positives = 48/81 (59%)
Query: 8 SYKLGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAK 65
S +G R V +A + R GTV YVG G W+GV +D GK+DGS+NG RYF+ +
Sbjct: 158 SIPVGSRCEVRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQ 217
Query: 66 SQKSGSFVRVHNLSPGISLPE 86
+ K G+FV+ ++ G PE
Sbjct: 218 A-KYGAFVKPAVVTVG-DFPE 236
>DICTYBASE|DDB_G0277983 [details] [associations]
symbol:tbcB "tubulin folding cofactor B"
species:44689 "Dictyostelium discoideum" [GO:0005874 "microtubule"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR000938 dictyBase:DDB_G0277983
Pfam:PF01302 GO:GO:0005737 GenomeReviews:CM000152_GR
EMBL:AAFI02000023 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
OMA:GKHDGMV RefSeq:XP_642051.1 HSSP:Q20728
ProteinModelPortal:Q54Z01 EnsemblProtists:DDB0266632 GeneID:8621263
KEGG:ddi:DDB_G0277983 Uniprot:Q54Z01
Length = 270
Score = 140 (54.3 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 19 NDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNL 78
N R+G V+YVG V+ SG W+GV+ D GK+DGS+ G +YFQ S K G F + N+
Sbjct: 202 NYDERLGKVQYVGTVEFSSGVWIGVELDLPLGKNDGSVKGKQYFQC-SPKYGCFAKPKNV 260
Query: 79 SPGISLPE 86
G PE
Sbjct: 261 LVG-DYPE 267
>UNIPROTKB|Q15435 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0030234 "enzyme
regulator activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=TAS] [GO:0008599 "protein phosphatase type 1 regulator
activity" evidence=TAS] [GO:0050790 "regulation of catalytic
activity" evidence=NAS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005634 GO:GO:0005737 EMBL:CH471063 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GO:GO:0008599 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:Z50749 EMBL:AF067136
EMBL:AF067130 EMBL:AF067132 EMBL:AF067133 EMBL:AF067134
EMBL:AF067135 EMBL:AF067131 EMBL:BT007296 EMBL:BT020134
EMBL:AK294043 EMBL:BC000910 EMBL:BC012397 EMBL:BC013001
IPI:IPI00033600 IPI:IPI00395771 IPI:IPI00759705 IPI:IPI00759816
PIR:S68209 RefSeq:NP_002703.1 UniGene:Hs.36587
ProteinModelPortal:Q15435 SMR:Q15435 DIP:DIP-1005N IntAct:Q15435
STRING:Q15435 PhosphoSite:Q15435 DMDM:74762145
REPRODUCTION-2DPAGE:IPI00033600 PaxDb:Q15435 PRIDE:Q15435
DNASU:5510 Ensembl:ENST00000234038 Ensembl:ENST00000272983
Ensembl:ENST00000401987 Ensembl:ENST00000406106
Ensembl:ENST00000407025 GeneID:5510 KEGG:hsa:5510 UCSC:uc002was.3
UCSC:uc002wat.1 UCSC:uc002wau.1 GeneCards:GC02P242088
HGNC:HGNC:9295 HPA:HPA034501 MIM:602877 neXtProt:NX_Q15435
PharmGKB:PA33658 InParanoid:Q15435 PhylomeDB:Q15435 ChiTaRS:PPP1R7
GenomeRNAi:5510 NextBio:21312 ArrayExpress:Q15435 Bgee:Q15435
CleanEx:HS_PPP1R7 Genevestigator:Q15435 GermOnline:ENSG00000115685
Uniprot:Q15435
Length = 360
Score = 140 (54.3 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 54/178 (30%), Positives = 91/178 (51%)
Query: 124 IQDKFSKFEELTSA-ALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K SK E L++ L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 172 VNNKISKIENLSNLHQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 228
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L+++ L L +
Sbjct: 229 --LTNLTVLSMQSNRLTK-IEGLQNLVNLRELYLSHNGIE--VIEGLENN-NKLTMLDIA 282
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I +S LQ + DN + WS++ +L RSLE +YL +N L +
Sbjct: 283 SNRIKKIENISH-----LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335
>UNIPROTKB|E1BAL0 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0045121 "membrane raft" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0090004 "positive regulation of establishment of protein
localization to plasma membrane" evidence=ISS] [GO:0045444 "fat
cell differentiation" evidence=ISS] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0072321
"chaperone-mediated protein transport" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0031901 "early endosome membrane" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=ISS] [GO:0044091 "membrane
biogenesis" evidence=ISS] [GO:0031115 "negative regulation of
microtubule polymerization" evidence=ISS] InterPro:IPR002110
InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248 Pfam:PF01302
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:DAAA02046954 IPI:IPI00686311 RefSeq:NP_001192827.1
UniGene:Bt.56647 PRIDE:E1BAL0 Ensembl:ENSBTAT00000026221
GeneID:522965 KEGG:bta:522965 NextBio:20873637 Uniprot:E1BAL0
Length = 547
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKISKAVDAP 367
>UNIPROTKB|Q96DZ5 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9606 "Homo sapiens" [GO:0005795 "Golgi stack" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IMP;IDA]
[GO:0005886 "plasma membrane" evidence=IDA;IMP] [GO:0008017
"microtubule binding" evidence=IMP;IDA] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=IMP] [GO:0035594
"ganglioside binding" evidence=IDA] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0055038 "recycling endosome
membrane" evidence=IDA] [GO:0044091 "membrane biogenesis"
evidence=IMP] [GO:0045121 "membrane raft" evidence=IDA] [GO:0043065
"positive regulation of apoptotic process" evidence=IMP]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0001934 "positive regulation of protein
phosphorylation" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=IMP] [GO:0072321 "chaperone-mediated protein transport"
evidence=IMP] [GO:0005802 "trans-Golgi network" evidence=ISS]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
Pfam:PF01302 GO:GO:0005886 GO:GO:0031901 GO:GO:0032588
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 EMBL:AJ427922 EMBL:AK094738
EMBL:AK289509 EMBL:BC013116 EMBL:BC014486 EMBL:AL117468
IPI:IPI00103362 PIR:T17253 RefSeq:NP_001186499.1 RefSeq:NP_056341.1
UniGene:Hs.466539 PDB:2CP0 PDBsum:2CP0 ProteinModelPortal:Q96DZ5
SMR:Q96DZ5 STRING:Q96DZ5 PhosphoSite:Q96DZ5 DMDM:116241302
PaxDb:Q96DZ5 PRIDE:Q96DZ5 Ensembl:ENST00000360535 GeneID:25999
KEGG:hsa:25999 UCSC:uc002ocz.2 CTD:25999 GeneCards:GC19M036505
H-InvDB:HIX0040341 HGNC:HGNC:24314 HPA:HPA041429 MIM:607382
neXtProt:NX_Q96DZ5 PharmGKB:PA162382439 HOGENOM:HOG000007206
HOVERGEN:HBG057079 InParanoid:Q96DZ5 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ PhylomeDB:Q96DZ5 EvolutionaryTrace:Q96DZ5
GenomeRNAi:25999 NextBio:47718 ArrayExpress:Q96DZ5 Bgee:Q96DZ5
CleanEx:HS_CLIP3 Genevestigator:Q96DZ5 GermOnline:ENSG00000105270
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
Uniprot:Q96DZ5
Length = 547
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKISKAVDAP 367
>UNIPROTKB|Q5R686 [details] [associations]
symbol:CLIP3 "CAP-Gly domain-containing linker protein 3"
species:9601 "Pongo abelii" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=ISS] [GO:0005802 "trans-Golgi
network" evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0010828
"positive regulation of glucose transport" evidence=ISS]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=ISS]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=ISS] [GO:0031901 "early endosome membrane" evidence=ISS]
[GO:0032588 "trans-Golgi network membrane" evidence=ISS]
[GO:0035594 "ganglioside binding" evidence=ISS] [GO:0043065
"positive regulation of apoptotic process" evidence=ISS]
[GO:0044091 "membrane biogenesis" evidence=ISS] [GO:0045121
"membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0008017
GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115
GO:GO:0010828 GO:GO:0055038 CTD:25999 HOVERGEN:HBG057079 KO:K10423
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CR860608 RefSeq:NP_001126592.1 UniGene:Pab.1232
ProteinModelPortal:Q5R686 SMR:Q5R686 GeneID:100173588
KEGG:pon:100173588 InParanoid:Q5R686 Uniprot:Q5R686
Length = 547
Score = 141 (54.7 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKISKAVDAP 367
>MGI|MGI:1923936 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10090 "Mus musculus" [GO:0001934 "positive regulation of
protein phosphorylation" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0010828 "positive regulation of glucose transport"
evidence=IMP] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISO] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISO] [GO:0031901 "early endosome membrane"
evidence=ISO] [GO:0032588 "trans-Golgi network membrane"
evidence=ISO] [GO:0035594 "ganglioside binding" evidence=ISO]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISO] [GO:0044091 "membrane biogenesis" evidence=ISO]
[GO:0045121 "membrane raft" evidence=ISO] [GO:0045807 "positive
regulation of endocytosis" evidence=ISO] [GO:0055038 "recycling
endosome membrane" evidence=ISO] [GO:0072321 "chaperone-mediated
protein transport" evidence=ISO] [GO:0090004 "positive regulation
of establishment of protein localization to plasma membrane"
evidence=IDA] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 MGI:MGI:1923936 Pfam:PF01302 GO:GO:0005886
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0005795
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828 GO:GO:0055038
EMBL:CH466593 GeneTree:ENSGT00700000104055 CTD:25999
HOGENOM:HOG000007206 HOVERGEN:HBG057079 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 EMBL:AC149067 EMBL:BC056173 EMBL:BC138413
EMBL:AK005167 IPI:IPI00265407 RefSeq:NP_001074583.1
UniGene:Mm.159258 PDB:1WHH PDBsum:1WHH ProteinModelPortal:B9EHT4
SMR:B9EHT4 PRIDE:B9EHT4 Ensembl:ENSMUST00000014065 GeneID:76686
KEGG:mmu:76686 UCSC:uc009gea.1 ChiTaRS:CLIP3
EvolutionaryTrace:Q9DB67 NextBio:345627 Bgee:B9EHT4
Genevestigator:B9EHT4 Uniprot:B9EHT4
Length = 547
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKVSKAVDAP 367
>RGD|1306245 [details] [associations]
symbol:Clip3 "CAP-GLY domain containing linker protein 3"
species:10116 "Rattus norvegicus" [GO:0001934 "positive regulation
of protein phosphorylation" evidence=ISO;ISS] [GO:0005802
"trans-Golgi network" evidence=ISO;ISS] [GO:0005886 "plasma
membrane" evidence=ISO;ISS] [GO:0008017 "microtubule binding"
evidence=ISO;ISS] [GO:0010828 "positive regulation of glucose
transport" evidence=ISO;ISS] [GO:0018230 "peptidyl-L-cysteine
S-palmitoylation" evidence=ISO;ISS] [GO:0031115 "negative
regulation of microtubule polymerization" evidence=ISO;ISS]
[GO:0031901 "early endosome membrane" evidence=ISO;ISS] [GO:0032588
"trans-Golgi network membrane" evidence=ISO;ISS] [GO:0035594
"ganglioside binding" evidence=ISO;ISS] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO;ISS] [GO:0044091
"membrane biogenesis" evidence=ISO;ISS] [GO:0045121 "membrane raft"
evidence=ISO;ISS] [GO:0045444 "fat cell differentiation"
evidence=ISS] [GO:0045807 "positive regulation of endocytosis"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISO;ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISO;ISS] InterPro:IPR002110 InterPro:IPR000938
PROSITE:PS50088 SMART:SM00248 Pfam:PF01302 RGD:1306245
GO:GO:0005886 GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0045121 GO:GO:0043065 GO:GO:0045807 GO:GO:0001934
GO:GO:0008017 GO:GO:0090004 GO:GO:0045444 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0031115 GO:GO:0010828 GO:GO:0055038 EMBL:CH473979
GeneTree:ENSGT00700000104055 CTD:25999 KO:K10423 OMA:DNVGAKK
OrthoDB:EOG4Z36DJ GO:GO:0035594 GO:GO:0072321 GO:GO:0044091
GO:GO:0018230 IPI:IPI00367085 RefSeq:NP_001100971.1
RefSeq:XP_003748868.1 UniGene:Rn.136605 SMR:D4A507
Ensembl:ENSRNOT00000028247 GeneID:100911911 GeneID:308493
KEGG:rno:100911911 KEGG:rno:308493 UCSC:RGD:1306245 NextBio:659004
Uniprot:D4A507
Length = 547
Score = 140 (54.3 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 352 GLFASVSKVSKAVDAP 367
>MGI|MGI:1913661 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10090 "Mus
musculus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
InterPro:IPR000938 MGI:MGI:1913661 Pfam:PF01302 GO:GO:0005634
GO:GO:0005737 GO:GO:0007399 GO:GO:0030154 eggNOG:COG5244
HOGENOM:HOG000209180 GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:1155 HOVERGEN:HBG003239
OMA:GKHDGMV OrthoDB:EOG44XJHQ EMBL:AK002316 EMBL:AK003655
EMBL:AK010438 EMBL:BC010684 IPI:IPI00315948 RefSeq:NP_079824.2
UniGene:Mm.27947 PDB:1V6E PDB:1WHG PDBsum:1V6E PDBsum:1WHG
ProteinModelPortal:Q9D1E6 SMR:Q9D1E6 STRING:Q9D1E6
PhosphoSite:Q9D1E6 PaxDb:Q9D1E6 PRIDE:Q9D1E6
Ensembl:ENSMUST00000006254 GeneID:66411 KEGG:mmu:66411
UCSC:uc009gds.2 InParanoid:Q9D1E6 EvolutionaryTrace:Q9D1E6
NextBio:321613 Bgee:Q9D1E6 CleanEx:MM_TBCB Genevestigator:Q9D1E6
GermOnline:ENSMUSG00000006095 Uniprot:Q9D1E6
Length = 244
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 32/78 (41%), Positives = 47/78 (60%)
Query: 11 LGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+G R V + + + R GTV YVG G W+GV +D GK+DGS+NG RYF+ ++ K
Sbjct: 161 VGSRCEVRAPDHSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSVNGKRYFECQA-K 219
Query: 69 SGSFVRVHNLSPGISLPE 86
G+FV+ ++ G PE
Sbjct: 220 YGAFVKPSAVTVG-DFPE 236
>RGD|1308169 [details] [associations]
symbol:Ppp1r7 "protein phosphatase 1, regulatory subunit 7"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 RGD:1308169
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161 OMA:PQYRRKI
OrthoDB:EOG4894MX EMBL:BC088868 IPI:IPI00358083
RefSeq:NP_001009825.1 UniGene:Rn.19437 ProteinModelPortal:Q5HZV9
IntAct:Q5HZV9 STRING:Q5HZV9 PhosphoSite:Q5HZV9 PRIDE:Q5HZV9
Ensembl:ENSRNOT00000022854 GeneID:301618 KEGG:rno:301618
UCSC:RGD:1308169 InParanoid:Q5HZV9 NextBio:649024
Genevestigator:Q5HZV9 GermOnline:ENSRNOG00000016974 Uniprot:Q5HZV9
Length = 360
Score = 136 (52.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 53/178 (29%), Positives = 90/178 (50%)
Query: 124 IQDKFSKFEEL-TSAALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K +K E + T L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 172 VNNKINKIENISTLQQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 228
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L+++ L L +
Sbjct: 229 --LSNLTVLSMQSNRLTK-IEGLQNLVNLRELYLSHNGIE--VIEGLENN-NKLTMLDIA 282
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I +S LQ + DN + WS++ +L RSLE +YL +N L +
Sbjct: 283 SNRIKKIENISH-----LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 335
>UNIPROTKB|D2HFU1 [details] [associations]
symbol:PANDA_009788 "Putative uncharacterized protein"
species:9646 "Ailuropoda melanoleuca" [GO:0001934 "positive
regulation of protein phosphorylation" evidence=ISS] [GO:0005802
"trans-Golgi network" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0010828 "positive regulation of glucose transport"
evidence=ISS] [GO:0018230 "peptidyl-L-cysteine S-palmitoylation"
evidence=ISS] [GO:0031115 "negative regulation of microtubule
polymerization" evidence=ISS] [GO:0031901 "early endosome membrane"
evidence=ISS] [GO:0032588 "trans-Golgi network membrane"
evidence=ISS] [GO:0035594 "ganglioside binding" evidence=ISS]
[GO:0043065 "positive regulation of apoptotic process"
evidence=ISS] [GO:0044091 "membrane biogenesis" evidence=ISS]
[GO:0045121 "membrane raft" evidence=ISS] [GO:0045444 "fat cell
differentiation" evidence=ISS] [GO:0045807 "positive regulation of
endocytosis" evidence=ISS] [GO:0055038 "recycling endosome
membrane" evidence=ISS] [GO:0072321 "chaperone-mediated protein
transport" evidence=ISS] [GO:0090004 "positive regulation of
establishment of protein localization to plasma membrane"
evidence=ISS] InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088
SMART:SM00248 Pfam:PF01302 GO:GO:0005886 GO:GO:0031901
GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796
SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121 GO:GO:0043065
GO:GO:0045807 GO:GO:0001934 GO:GO:0008017 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 HOGENOM:HOG000007206 GO:GO:0035594 GO:GO:0072321
GO:GO:0044091 GO:GO:0018230 EMBL:GL192794 Uniprot:D2HFU1
Length = 504
Score = 138 (53.6 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 30/76 (39%), Positives = 43/76 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 294 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 350
Query: 70 GSFVRVHNLSPGISLP 85
G F V +S + P
Sbjct: 351 GLFASVSKISKVVDAP 366
>POMBASE|SPAC13D6.05 [details] [associations]
symbol:alp11 "tubulin specific chaperone cofactor B"
species:4896 "Schizosaccharomyces pombe" [GO:0000226 "microtubule
cytoskeleton organization" evidence=IC] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005874 "microtubule" evidence=IEA] [GO:0006457
"protein folding" evidence=TAS] [GO:0007021 "tubulin complex
assembly" evidence=ISO] [GO:0043014 "alpha-tubulin binding"
evidence=IPI] [GO:0072668 "tubulin complex biogenesis"
evidence=ISO] InterPro:IPR000938 InterPro:IPR000626 SMART:SM00213
PomBase:SPAC13D6.05 Pfam:PF01302 GO:GO:0005829 GO:GO:0005634
GO:GO:0006457 GO:GO:0000226 EMBL:CU329670 GenomeReviews:CU329670_GR
EMBL:AB008750 PIR:T43283 RefSeq:NP_593683.2
ProteinModelPortal:Q10235 STRING:Q10235 EnsemblFungi:SPAC13D6.05.1
GeneID:2542814 KEGG:spo:SPAC13D6.05 eggNOG:COG5244
HOGENOM:HOG000209180 OMA:WVGIEFD OrthoDB:EOG42593D NextBio:20803856
GO:GO:0005874 GO:GO:0007021 Gene3D:2.30.30.190 InterPro:IPR019955
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
PROSITE:PS50053 Uniprot:Q10235
Length = 234
Score = 131 (51.2 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 31/78 (39%), Positives = 47/78 (60%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGT--WLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
L R +A + R GT++Y+G V + W+GV++D GK+DG+++G RYF AK+ K
Sbjct: 154 LNSRCCAAGE--RYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKN-K 210
Query: 69 SGSFVRVHNLSPGISLPE 86
GSF+R + G PE
Sbjct: 211 HGSFLRSSEVEVGDFPPE 228
>UNIPROTKB|Q3T0W4 [details] [associations]
symbol:PPP1R7 "Protein phosphatase 1 regulatory subunit 7"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 EMBL:BC102228 IPI:IPI00685276
RefSeq:NP_001029410.1 UniGene:Bt.48815 ProteinModelPortal:Q3T0W4
STRING:Q3T0W4 PRIDE:Q3T0W4 Ensembl:ENSBTAT00000001045 GeneID:505297
KEGG:bta:505297 CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161
InParanoid:Q3T0W4 OMA:PQYRRKI OrthoDB:EOG4894MX NextBio:20867069
Uniprot:Q3T0W4
Length = 360
Score = 135 (52.6 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 55/178 (30%), Positives = 90/178 (50%)
Query: 124 IQDKFSKFEELTSA-ALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K +K E ++S L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 172 VNNKINKIENISSLHQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 228
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L ++ L L +
Sbjct: 229 --LTNLTVLSMQSNRLTK-IEGLQSLVNLRELYLSHNGIE--VIEGLDNN-NKLTMLDIA 282
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I VS LQ + DN + WS++ +L RSLE +YL +N L R
Sbjct: 283 SNRIKKIENVSH-----LTELQEFWMNDNLLDCWSDLDELKGARSLETVYLERNPLQR 335
>UNIPROTKB|Q8HXL4 [details] [associations]
symbol:CKAP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 GO:GO:0005634 GO:GO:0005737 eggNOG:COG5244
HOGENOM:HOG000209180 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 EMBL:AJ410870 CTD:1155
HOVERGEN:HBG003239 OMA:GKHDGMV OrthoDB:EOG44XJHQ HSSP:Q20728
EMBL:CU694686 RefSeq:NP_001192332.1 UniGene:Ssc.3245 SMR:Q8HXL4
STRING:Q8HXL4 Ensembl:ENSSSCT00000003232 GeneID:100522808
KEGG:ssc:100522808 Uniprot:Q8HXL4
Length = 244
Score = 131 (51.2 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 32/78 (41%), Positives = 45/78 (57%)
Query: 11 LGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+G R V + R GTV YVG G W+GV +D GK+DGS+NG RYF+ ++ K
Sbjct: 161 VGSRCEVRAPGQPPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQA-K 219
Query: 69 SGSFVRVHNLSPGISLPE 86
G+FV+ ++ G PE
Sbjct: 220 YGAFVKPSVVTVG-DFPE 236
>UNIPROTKB|C9JJD0 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00873712 ProteinModelPortal:C9JJD0 SMR:C9JJD0 STRING:C9JJD0
Ensembl:ENST00000454119 HOGENOM:HOG000213789 ArrayExpress:C9JJD0
Bgee:C9JJD0 Uniprot:C9JJD0
Length = 121
Score = 114 (45.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JJN7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00465112 ProteinModelPortal:C9JJN7 SMR:C9JJN7 STRING:C9JJN7
PRIDE:C9JJN7 Ensembl:ENST00000437375 ArrayExpress:C9JJN7
Bgee:C9JJN7 Uniprot:C9JJN7
Length = 87
Score = 114 (45.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JTE5 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JTE5 SMR:C9JTE5 STRING:C9JTE5
Ensembl:ENST00000421392 ArrayExpress:C9JTE5 Bgee:C9JTE5
Uniprot:C9JTE5
Length = 76
Score = 114 (45.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>UNIPROTKB|C9JZA4 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916359 ProteinModelPortal:C9JZA4 SMR:C9JZA4
Ensembl:ENST00000413111 Bgee:C9JZA4 Uniprot:C9JZA4
Length = 76
Score = 114 (45.2 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 26/65 (40%), Positives = 35/65 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>ZFIN|ZDB-GENE-070117-2205 [details] [associations]
symbol:dctn1a "dynactin 1a" species:7955 "Danio
rerio" [GO:0045176 "apical protein localization" evidence=IMP]
[GO:0040023 "establishment of nucleus localization" evidence=IMP]
[GO:0060042 "retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0048663 "neuron fate commitment" evidence=IMP] [GO:0010842
"retina layer formation" evidence=IGI;IMP] [GO:0060219 "camera-type
eye photoreceptor cell differentiation" evidence=IGI]
InterPro:IPR000938 Pfam:PF01302 ZFIN:ZDB-GENE-070117-2205
GO:GO:0010842 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0040023 GO:GO:0048663
GO:GO:0045176 GeneTree:ENSGT00700000104055 InterPro:IPR022157
Pfam:PF12455 GO:GO:0060219 EMBL:CR926130 EMBL:CT030017
IPI:IPI00960481 Ensembl:ENSDART00000015410 Uniprot:E7F1E0
Length = 1226
Score = 119 (46.9 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G V +R GTV Y+G SG W+GV D GK+DG++ G RYF + +
Sbjct: 11 KVGSVVEVIGKGQR-GTVAYIGATLFASGKWVGVILDEAKGKNDGTVQGKRYFTCE-ENH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
Score = 71 (30.1 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 31/126 (24%), Positives = 59/126 (46%)
Query: 159 KELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRIL-VLNCTGV 217
++ DLTG L GA GEQL + L S L+ + SI I+ V G+
Sbjct: 583 EKFDLTGGSLERAGLRGAAGEQLSFASGLVYSLTLLQATLHKYELYVSISIIHVYKRMGM 642
Query: 218 NWMQVEILKHSLPALEELHLMGNSISE---ITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
+ ++ + + SL L +L L + + E + P++ + Q ++ L + ++C + ++
Sbjct: 643 LYSEMCVHERSLDFLIDL-LHKDQLDETVQVEPLTKAVFQHLYSVHLCDQPEDCTVQLAD 701
Query: 275 ILKLCQ 280
+K Q
Sbjct: 702 HIKFTQ 707
>MGI|MGI:1913635 [details] [associations]
symbol:Ppp1r7 "protein phosphatase 1, regulatory (inhibitor)
subunit 7" species:10090 "Mus musculus" [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1913635
GO:GO:0005634 eggNOG:COG4886 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
CTD:5510 HOGENOM:HOG000211189 HOVERGEN:HBG082161 OMA:PQYRRKI
OrthoDB:EOG4894MX EMBL:AF067129 EMBL:AF222867 EMBL:AK009870
EMBL:AK145136 EMBL:AK162517 EMBL:BC013524 IPI:IPI00129319
RefSeq:NP_075689.1 UniGene:Mm.88704 ProteinModelPortal:Q3UM45
SMR:Q3UM45 STRING:Q3UM45 REPRODUCTION-2DPAGE:Q3UM45 PaxDb:Q3UM45
PRIDE:Q3UM45 Ensembl:ENSMUST00000027494 GeneID:66385 KEGG:mmu:66385
UCSC:uc007cdv.1 InParanoid:Q3UM45 NextBio:321517 Bgee:Q3UM45
Genevestigator:Q3UM45 GermOnline:ENSMUSG00000026275 Uniprot:Q3UM45
Length = 361
Score = 134 (52.2 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 52/178 (29%), Positives = 91/178 (51%)
Query: 124 IQDKFSKFEELTSA-ALPYLGVSSPGA----NIGTIVTNLKELDLTGNLLSDWKDIGAFG 178
+ +K +K E +++ L L + S NI T+ TNL+ L L N ++ +++ A
Sbjct: 173 VNNKINKIENISNLHQLQMLELGSNRIRAIENIDTL-TNLESLFLGKNKITKLQNLDA-- 229
Query: 179 EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L VL++ +N ++K + GL L ++R L L+ G+ +E L+++ L L +
Sbjct: 230 --LTNLTVLSVQSNRLAK-IEGLQSLVNLRELYLSNNGIE--VIEGLENN-NKLTMLDIA 283
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNR 296
N I +I +S LQ + DN + WS++ +L RSLE +YL +N L +
Sbjct: 284 SNRIKKIENISH-----LTELQEFWMNDNLLESWSDLDELKGARSLETVYLERNPLQK 336
>UNIPROTKB|Q5E951 [details] [associations]
symbol:TBCB "Tubulin-folding cofactor B" species:9913 "Bos
taurus" [GO:0007023 "post-chaperonin tubulin folding pathway"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
Reactome:REACT_17065 InterPro:IPR000938 Pfam:PF01302 GO:GO:0005829
GO:GO:0005634 GO:GO:0007399 GO:GO:0030154 Reactome:REACT_103209
eggNOG:COG5244 HOGENOM:HOG000209180 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 GO:GO:0007023
EMBL:BT021069 EMBL:BC102571 IPI:IPI00697178 RefSeq:NP_001014939.1
UniGene:Bt.55460 ProteinModelPortal:Q5E951 SMR:Q5E951 STRING:Q5E951
PRIDE:Q5E951 Ensembl:ENSBTAT00000019973 GeneID:530447
KEGG:bta:530447 CTD:1155 HOVERGEN:HBG003239 InParanoid:Q5E951
OMA:GKHDGMV OrthoDB:EOG44XJHQ NextBio:20875260 Uniprot:Q5E951
Length = 244
Score = 130 (50.8 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 31/78 (39%), Positives = 45/78 (57%)
Query: 11 LGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+G R V + R GTV YVG G W+G+ +D GK+DGS+NG RYF+ ++ K
Sbjct: 161 VGSRCEVRTPGQPPRRGTVMYVGLTDFKPGYWIGIRYDEPLGKNDGSVNGKRYFECQA-K 219
Query: 69 SGSFVRVHNLSPGISLPE 86
G+FV+ ++ G PE
Sbjct: 220 YGAFVKPSVVTVG-DFPE 236
>MGI|MGI:2674939 [details] [associations]
symbol:Podn "podocan" species:10090 "Mus musculus"
[GO:0005518 "collagen binding" evidence=ISO] [GO:0005576
"extracellular region" evidence=IEA] [GO:0005578 "proteinaceous
extracellular matrix" evidence=IEA] [GO:0005615 "extracellular
space" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0030336 "negative regulation of cell migration"
evidence=ISO] Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450
MGI:MGI:2674939 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
GO:GO:0005578 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0030336 InterPro:IPR000372 SMART:SM00013 EMBL:AL611936
EMBL:CH466527 GeneTree:ENSGT00600000084286 HSSP:P07359 CTD:127435
HOVERGEN:HBG059195 OMA:SGNRLHT OrthoDB:EOG42V8FX EMBL:AY313606
EMBL:AK034987 EMBL:BC094340 IPI:IPI00222916 IPI:IPI00807737
RefSeq:NP_766462.2 UniGene:Mm.74710 ProteinModelPortal:Q7TQ62
SMR:Q7TQ62 PhosphoSite:Q7TQ62 PRIDE:Q7TQ62
Ensembl:ENSMUST00000044248 Ensembl:ENSMUST00000106708
Ensembl:ENSMUST00000106709 GeneID:242608 KEGG:mmu:242608
UCSC:uc008uaq.1 UCSC:uc012did.1 HOGENOM:HOG000231119
InParanoid:A2A8F3 NextBio:385450 Bgee:Q7TQ62 CleanEx:MM_PODN
Genevestigator:Q7TQ62 GermOnline:ENSMUSG00000028600 Uniprot:Q7TQ62
Length = 611
Score = 137 (53.3 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 75/251 (29%), Positives = 120/251 (47%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LTS L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 143 FEHLTS--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 197
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 198 YLHNNKLAD--AGLPDHMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 251
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 252 EKIPPGA---FSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 308
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHA 357
P + + H +A +S E L P +NL LLL +S +L L ++H
Sbjct: 309 PRSLVLLHLEKNAIQSVEADVLTPIRNLEYLLL-HSNQLQAKGIHPLAFQGLKKLHTVHL 367
Query: 358 SGNNMIEDLAS 368
NN +E + S
Sbjct: 368 Y-NNALERVPS 377
>UNIPROTKB|Q724E1 [details] [associations]
symbol:inlE "Internalin E" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0009405 eggNOG:COG4886
InterPro:IPR014756 SUPFAM:SSF81296 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030260 InterPro:IPR025875
Pfam:PF12799 InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR013378
InterPro:IPR012569 Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543
HOGENOM:HOG000011905 RefSeq:YP_012893.1 ProteinModelPortal:Q724E1
SMR:Q724E1 STRING:Q724E1 GeneID:2799899 KEGG:lmf:LMOf2365_0283
PATRIC:20321779 OMA:FTENEEP ProtClustDB:CLSK491300 Uniprot:Q724E1
Length = 499
Score = 135 (52.6 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 68/244 (27%), Positives = 115/244 (47%)
Query: 82 ISLPEALRVRYR-GESSKEEEDEMYVLSASNKHVSIELVGKDKIQ---DKFSKFEELTSA 137
++L L + + G SSKE + + + + V D ++ +K +E+T
Sbjct: 12 VTLAAVLAITFWVGMSSKEVQAAVIEQPTPINEIFTDPVVADNVKTLLEKADVTDEVTQT 71
Query: 138 ALPYLG-VSSPGANIGTI-----VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSN 191
L + +S+ A I TI +TNL EL+LT N ++D + L + L LS
Sbjct: 72 DLDSITQLSAKSAGITTIEGMQYLTNLSELELTDNQITDVSPLA----NLTKITELGLSG 127
Query: 192 NLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSS- 250
N + K+V+ L LKS+++L L T + V L L L+EL+L N I++I+P+++
Sbjct: 128 NPL-KDVSALAGLKSLKMLHLIYTDIT--DVTSLA-GLTNLQELNLDINQITDISPLAAL 183
Query: 251 -----------------PIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
PI L +LN E NC + S+I L + SL ++YL +N
Sbjct: 184 SNLQTLSLGYTQVSDLTPIAN-LSKLTILNAE-NC--KVSDISPLASLSSLTEVYLRENQ 239
Query: 294 LNRI 297
++ +
Sbjct: 240 ISDV 243
>WB|WBGene00011345 [details] [associations]
symbol:dma-1 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016358
"dendrite development" evidence=IMP] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
HSSP:Q9BZR6 GeneTree:ENSGT00700000104286 EMBL:Z75713 PIR:T24315
RefSeq:NP_492253.1 ProteinModelPortal:Q22075 SMR:Q22075
STRING:Q22075 PaxDb:Q22075 EnsemblMetazoa:T01G9.3 GeneID:187968
KEGG:cel:CELE_T01G9.3 UCSC:T01G9.3 CTD:187968 WormBase:T01G9.3
HOGENOM:HOG000017308 InParanoid:Q22075 OMA:LTMANTH NextBio:937126
Uniprot:Q22075
Length = 603
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 42/131 (32%), Positives = 74/131 (56%)
Query: 180 QLPALAVLNL-SNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
+LP+L VL+L SNN+ ++ + +R+L L+ +N + + + L AL L L
Sbjct: 109 RLPSLEVLDLHSNNIEHATMSNFGGMPKLRVLDLSSNHLNILPTGVFTY-LRALRSLSLS 167
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRI 297
N+IS++ S+ +++G ++L++L L+ N I I +L + L++LYLN NL+ I
Sbjct: 168 NNTISDL---STNLLRGLNSLRVLRLDRNPIPI-EHINELFTDVSQLDELYLNHCNLSSI 223
Query: 298 YYPNNDTIHEL 308
Y D I +L
Sbjct: 224 YSLALDRIPQL 234
>UNIPROTKB|Q96JA1 [details] [associations]
symbol:LRIG1 "Leucine-rich repeats and immunoglobulin-like
domains protein 1" species:9606 "Homo sapiens" [GO:0016021
"integral to membrane" evidence=IEA] InterPro:IPR001611
InterPro:IPR007110 PROSITE:PS50835 PROSITE:PS51450 GO:GO:0016021
Gene3D:2.60.40.10 InterPro:IPR013783 InterPro:IPR003599
SMART:SM00409 InterPro:IPR003598 SMART:SM00408 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372 SMART:SM00013
CleanEx:HS_LIG1 Pfam:PF01463 EMBL:AF381545 EMBL:AB050468
EMBL:BC071561 EMBL:BC014276 EMBL:AL117666 IPI:IPI00000775
IPI:IPI00470372 PIR:T17346 RefSeq:NP_056356.2 UniGene:Hs.518055
ProteinModelPortal:Q96JA1 SMR:Q96JA1 IntAct:Q96JA1 STRING:Q96JA1
PhosphoSite:Q96JA1 DMDM:143811415 PaxDb:Q96JA1 PRIDE:Q96JA1
Ensembl:ENST00000273261 Ensembl:ENST00000383703 GeneID:26018
KEGG:hsa:26018 UCSC:uc003dmw.3 UCSC:uc010hoa.3 CTD:26018
GeneCards:GC03M066511 H-InvDB:HIX0003431 HGNC:HGNC:17360 MIM:608868
neXtProt:NX_Q96JA1 PharmGKB:PA38450 HOGENOM:HOG000113380
HOVERGEN:HBG052353 InParanoid:Q96JA1 OMA:ESNGVCP OrthoDB:EOG48PMJN
PhylomeDB:Q96JA1 ChiTaRS:LRIG1 GenomeRNAi:26018 NextBio:47784
Bgee:Q96JA1 CleanEx:HS_LRIG1 Genevestigator:Q96JA1
GermOnline:ENSG00000144749 Uniprot:Q96JA1
Length = 1093
Score = 136 (52.9 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 63/234 (26%), Positives = 112/234 (47%)
Query: 158 LKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGV 217
+KEL+L GN + ++GAF +L L LS N +T LP +++ ++ L +
Sbjct: 165 IKELNLAGNRIGTL-ELGAFDGLSRSLLTLRLSKN----RITQLP-VRAFKLPRLTQLDL 218
Query: 218 NWMQVEILK----HSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWS 273
N ++ +++ L +LE L L N+IS++T + G + +L+LE N + E +
Sbjct: 219 NRNRIRLIEGLTFQGLNSLEVLKLQRNNISKLTDGA---FWGLSKMHVLHLEYNSLVEVN 275
Query: 274 EILKLCQIRSLEQLYLNKNNLNRIY---YPNNDTIHELVSAHES----HEESYLPFQNLC 326
L + +L QL+L+ N++ RI+ + +HELV + + EES +L
Sbjct: 276 SG-SLYGLTALHQLHLSNNSIARIHRKGWSFCQKLHELVLSFNNLTRLDEESLAELSSLS 334
Query: 327 CLLLGNSKKLPTSSHVSFVVYFLIFAFSL-HASGNNMIEDLA-SIDSLDSFPKL 378
L L ++ + + +F + L H + IED + + LDS KL
Sbjct: 335 VLRLSHNS-ISHIAEGAFKGLRSLRVLDLDHNEISGTIEDTSGAFSGLDSLSKL 387
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 57 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 114
Query: 67 QKSGSFVRVHNLS 79
+ G F R LS
Sbjct: 115 LR-GIFTRPSKLS 126
Score = 121 (47.7 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 28/76 (36%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + +
Sbjct: 216 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-RY 272
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 273 GLFAPVHKVTK-IGFP 287
Score = 62 (26.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 53/225 (23%), Positives = 97/225 (43%)
Query: 86 EALRVRYRGESSKEE-EDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGV 144
E ++ + ESS+E E+ LSASN+ + E + ++ K + S + L
Sbjct: 559 EMSSLKEKFESSEEALRKEIKTLSASNERMGKE---NESLKTKLDHANKENSDVIE-LWK 614
Query: 145 SSPGANIGTIVTNLKELDLTGNLLSDWKDIGA----FGEQLPALAVLNLS-----NNLMS 195
S + I + ++EL ++ N K +GA F E + + L +NL
Sbjct: 615 SKLESAIASHQQAMEELKVSFN-----KGVGAQTAEFAELKTQMEKVKLDYENEMSNLKL 669
Query: 196 KEVTGLPQ-LKSIRIL---VLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEITPVS 249
K+ Q LK I L +L T +E LK L ++E+ HL M ++++++
Sbjct: 670 KQENEKSQHLKEIEALKAKLLEVTEEKEQTLENLKAKLESVEDQHLVEMEDTLNKLQEAE 729
Query: 250 SPIVQGFDNLQL-LNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
+ + D LQ N + I ++ ++ + + L+ L K N
Sbjct: 730 IKVKE-LDVLQAKCNEQTKLIGSLTQQIRASEEKLLDLAALQKAN 773
>ZFIN|ZDB-GENE-040426-1719 [details] [associations]
symbol:tbcela "tubulin folding cofactor E-like a"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000626 SMART:SM00213
ZFIN:ZDB-GENE-040426-1719 InterPro:IPR019955 PROSITE:PS50053
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00530000063405
EMBL:BX548078 IPI:IPI00851429 Ensembl:ENSDART00000124092
Ensembl:ENSDART00000135770 Uniprot:F1QNT3
Length = 448
Score = 130 (50.8 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 53/229 (23%), Positives = 108/229 (47%)
Query: 82 ISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIEL-VGKDKIQDKFSKFEELTSAA-- 138
++LP L + G S ++ E+ A HV +EL + +K+QD + + ++ S
Sbjct: 71 LNLPSVLVLNGCGISHAGDQGEIAAFCA---HV-VELDLSHNKLQD-WHEISKIVSNVPN 125
Query: 139 LPYLGVSSPGANIGTI-------VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLS- 190
L +L +SS + + ++++ L +S W + F +++P L L L
Sbjct: 126 LEFLNLSSNQLSDAVLDPDCAKAFSSIRRFVLNNTQVS-WDTVHTFTQEMPELEELFLCL 184
Query: 191 NNLMSKEVTGLPQLKSIRILVLNCTGVN-WMQVEILKHSLPALEELHLMGNSISEITPVS 249
N + + +P ++R+L + ++ W +V + PAL+ L + N+++ I
Sbjct: 185 NEYTTVTLAAMP-CPTLRLLHITDNNLHEWNEVRKIGSMFPALDTLVMANNNLNSIQESG 243
Query: 250 SPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIY 298
+ + F NL+ +NL ++ + W +I KL + LE++ L L + Y
Sbjct: 244 EILHRLFPNLRSINLHNSGLNRWEDIEKLTFLPKLEEVRLQGIPLLQTY 292
Score = 123 (48.4 bits), Expect = 0.00014, P = 0.00014
Identities = 52/210 (24%), Positives = 93/210 (44%)
Query: 218 NWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK 277
+W ++ + ++P LE L+L N +S+ + + F +++ L +N W +
Sbjct: 112 DWHEISKIVSNVPNLEFLNLSSNQLSDAV-LDPDCAKAFSSIRRFVL-NNTQVSWDTVHT 169
Query: 278 LCQ-IRSLEQLYLNKNNLNRIYY-----PNNDTIHELVS-AHESHEESYLP--FQNLCCL 328
Q + LE+L+L N + P +H + HE +E + F L L
Sbjct: 170 FTQEMPELEELFLCLNEYTTVTLAAMPCPTLRLLHITDNNLHEWNEVRKIGSMFPALDTL 229
Query: 329 LLGNSK--KLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSEN 386
++ N+ + S + ++ + + +LH SG N ED I+ L PKL ++RL
Sbjct: 230 VMANNNLNSIQESGEILHRLFPNLRSINLHNSGLNRWED---IEKLTFLPKLEEVRLQGI 286
Query: 387 PVSDPGRGGISRFAIIARLGKIKILNGSEV 416
P+ R +IA+L + LNGS V
Sbjct: 287 PLLQTYTSTERRSLMIAQLPSVTSLNGSVV 316
>FB|FBgn0036494 [details] [associations]
symbol:Toll-6 "Toll-6" species:7227 "Drosophila melanogaster"
[GO:0004888 "transmembrane signaling receptor activity"
evidence=ISS;NAS] [GO:0005886 "plasma membrane" evidence=NAS]
[GO:0016021 "integral to membrane" evidence=ISS] [GO:0006952
"defense response" evidence=NAS] [GO:0007165 "signal transduction"
evidence=IEA;ISS] Pfam:PF00560 InterPro:IPR000157
InterPro:IPR001611 Pfam:PF01582 PROSITE:PS50104 PROSITE:PS51450
SMART:SM00255 GO:GO:0016021 InterPro:IPR003591 SMART:SM00369
GO:GO:0045087 GO:GO:0005622 InterPro:IPR000372 SMART:SM00013
GO:GO:0004888 SUPFAM:SSF52200 HSSP:O60603 FlyBase:FBgn0036494
EMBL:AF247766 ProteinModelPortal:Q9NBK9 STRING:Q9NBK9 PRIDE:Q9NBK9
InParanoid:Q9NBK9 ArrayExpress:Q9NBK9 Bgee:Q9NBK9 Uniprot:Q9NBK9
Length = 1514
Score = 135 (52.6 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 75/296 (25%), Positives = 132/296 (44%)
Query: 103 EMYVLSAS-NKHVSIELVG-KDKIQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKE 160
E+ L+ S N+ + +G +D+ Q+ + E TS SS + +L+
Sbjct: 225 ELSALNMSENRLQDVNELGFRDRSQEPTNGSTESTSTTESAKKSSSSSTSCSL---DLEY 281
Query: 161 LDLTGNLLSDWKDIGAFG-EQLPALAVLNLSNNLMSKEVT-GLPQLKSIRILVLNCTGVN 218
LD++ N D+ + A G L L VL+++NN +S L LK+++IL L+ +
Sbjct: 282 LDVSHN---DFVVLPANGFGTLRRLRVLSVNNNGISMIADKALSGLKNLQILNLSSNKIV 338
Query: 219 WMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE-WSEILK 277
+ E+ ++E++L NSIS + P + D LQ L+L N I W +
Sbjct: 339 ALPTELFAEQAKIIQEVYLQNNSISVLNP---QLFSNLDQLQALDLSMNQITSTWIDKNT 395
Query: 278 LCQIRSLEQLYLNKNNLNRI---YYPNNDTIHELVSAHESHE----ESYLPFQNLCCLLL 330
+ L L L+ N L ++ + + T+ L H E +++ P NL LLL
Sbjct: 396 FVGLIRLVLLNLSHNKLTKLEPEIFSDLYTLQILNLRHNQLENIAADTFAPMNNLHTLLL 455
Query: 331 GNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSEN 386
++K ++ +Y L SL + NN + + D+ + L D+ L+ N
Sbjct: 456 SHNKLKYLDAYALNGLYVL----SLLSLDNNALIGVHP-DAFRNCSALQDLNLNGN 506
>UNIPROTKB|C9J1B7 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9606 "Homo
sapiens" [GO:0031252 "cell leading edge" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0031252 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005868 EMBL:AC005041 HGNC:HGNC:2711 ChiTaRS:DCTN1
IPI:IPI00916125 ProteinModelPortal:C9J1B7 SMR:C9J1B7 STRING:C9J1B7
Ensembl:ENST00000440727 ArrayExpress:C9J1B7 Bgee:C9J1B7
Uniprot:C9J1B7
Length = 64
Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF
Sbjct: 11 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYF 62
>RGD|1309991 [details] [associations]
symbol:Podn "podocan" species:10116 "Rattus norvegicus"
[GO:0032934 "sterol binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003033 Pfam:PF02036 PROSITE:PS51450
RGD:1309991 RGD:3642 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0030336 GO:GO:0032934
SUPFAM:SSF55718 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 EMBL:AY539911 IPI:IPI00421405 SMR:Q6QI48
IntAct:Q6QI48 STRING:Q6QI48 Ensembl:ENSRNOT00000015466
InParanoid:Q6QI48 Genevestigator:Q6QI48 Uniprot:Q6QI48
Length = 643
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 73/251 (29%), Positives = 119/251 (47%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LTS L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 173 FEHLTS--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 227
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 228 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 281
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 282 EKIPPGA---FSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 338
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHA 357
P + + H + +S + L P +NL LLL +S +L L ++H
Sbjct: 339 PRSLVLLHLEKNVIQSVDADVLTPIRNLEYLLL-HSNQLQAKGIHPLAFQGLKRLHTVHL 397
Query: 358 SGNNMIEDLAS 368
NN +E + S
Sbjct: 398 Y-NNALERVPS 407
>UNIPROTKB|Q6QI48 [details] [associations]
symbol:Scp2 "LRRGT00160" species:10116 "Rattus norvegicus"
[GO:0032934 "sterol binding" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003033 Pfam:PF02036 PROSITE:PS51450
RGD:1309991 RGD:3642 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0030336 GO:GO:0032934
SUPFAM:SSF55718 HOVERGEN:HBG059195 OrthoDB:EOG42V8FX
HOGENOM:HOG000231119 EMBL:AY539911 IPI:IPI00421405 SMR:Q6QI48
IntAct:Q6QI48 STRING:Q6QI48 Ensembl:ENSRNOT00000015466
InParanoid:Q6QI48 Genevestigator:Q6QI48 Uniprot:Q6QI48
Length = 643
Score = 130 (50.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 73/251 (29%), Positives = 119/251 (47%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LTS L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 173 FEHLTS--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 227
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 228 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 281
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 282 EKIPPGA---FSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 338
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHA 357
P + + H + +S + L P +NL LLL +S +L L ++H
Sbjct: 339 PRSLVLLHLEKNVIQSVDADVLTPIRNLEYLLL-HSNQLQAKGIHPLAFQGLKRLHTVHL 397
Query: 358 SGNNMIEDLAS 368
NN +E + S
Sbjct: 398 Y-NNALERVPS 407
>FB|FBgn0019968 [details] [associations]
symbol:Khc-73 "Kinesin-73" species:7227 "Drosophila
melanogaster" [GO:0003777 "microtubule motor activity"
evidence=ISS;IDA] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0005871 "kinesin complex" evidence=ISS] [GO:0007018
"microtubule-based movement" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000235 "astral microtubule"
evidence=IDA] [GO:0051294 "establishment of spindle orientation"
evidence=IMP] [GO:0050803 "regulation of synapse structure and
activity" evidence=IMP] [GO:0035371 "microtubule plus end"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
InterPro:IPR000253 InterPro:IPR000938 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00498
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
SMART:SM00240 Pfam:PF01302 EMBL:AE013599 GO:GO:0005524
GO:GO:0005871 GO:GO:0042803 GeneTree:ENSGT00700000104150
GO:GO:0050803 Gene3D:2.60.200.20 SUPFAM:SSF49879 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005769 GO:GO:0003777 GO:GO:0035371
GO:GO:0007018 Gene3D:3.40.850.10 GO:GO:0051294 KO:K10392
OMA:SKNGQPA InterPro:IPR022140 InterPro:IPR022164 Pfam:PF12473
Pfam:PF12423 RefSeq:NP_609201.3 RefSeq:NP_788356.1 UniGene:Dm.350
SMR:A1ZA18 IntAct:A1ZA18 STRING:A1ZA18 EnsemblMetazoa:FBtr0087357
GeneID:36718 KEGG:dme:Dmel_CG8183 UCSC:CG8183-RA CTD:36718
FlyBase:FBgn0019968 InParanoid:A1ZA18 OrthoDB:EOG48W9GT
GenomeRNAi:36718 NextBio:800035 Uniprot:A1ZA18
Length = 1921
Score = 135 (52.6 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGISL 84
G +++VG + G W+GV+ D GK+DGS+ GV+YFQ K K G FVR L
Sbjct: 1820 GVIRFVGTTEFQPGAWIGVELDTPTGKNDGSVKGVQYFQCKP-KHGMFVRSDKLMLD-KR 1877
Query: 85 PEALRVRYRGESSKEEEDEM 104
+A+R E S EM
Sbjct: 1878 GKAMRAYKAAEKSNSISKEM 1897
>UNIPROTKB|I3LGS7 [details] [associations]
symbol:CLIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090004 "positive regulation of establishment of
protein localization to plasma membrane" evidence=IEA] [GO:0072321
"chaperone-mediated protein transport" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0045807 "positive
regulation of endocytosis" evidence=IEA] [GO:0045444 "fat cell
differentiation" evidence=IEA] [GO:0045121 "membrane raft"
evidence=IEA] [GO:0044091 "membrane biogenesis" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035594 "ganglioside binding" evidence=IEA]
[GO:0032588 "trans-Golgi network membrane" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0031115
"negative regulation of microtubule polymerization" evidence=IEA]
[GO:0018230 "peptidyl-L-cysteine S-palmitoylation" evidence=IEA]
[GO:0010828 "positive regulation of glucose transport"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0001934 "positive
regulation of protein phosphorylation" evidence=IEA]
InterPro:IPR002110 InterPro:IPR000938 SMART:SM00248 Pfam:PF01302
GO:GO:0031901 GO:GO:0032588 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 GO:GO:0045121
GO:GO:0043065 GO:GO:0045807 GO:GO:0001934 GO:GO:0090004
GO:GO:0045444 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0031115 GO:GO:0010828
GO:GO:0055038 GeneTree:ENSGT00700000104055 OMA:DNVGAKK
GO:GO:0035594 GO:GO:0072321 GO:GO:0044091 GO:GO:0018230
EMBL:CU694686 Ensembl:ENSSSCT00000022327 Uniprot:I3LGS7
Length = 551
Score = 128 (50.1 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG + S + + GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K G
Sbjct: 299 LGDKGLSQSQ-KTTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQG 356
Query: 71 SFVRVHNLSPGISLP 85
F V +S + P
Sbjct: 357 LFASVSKISKAVDAP 371
>CGD|CAL0006089 [details] [associations]
symbol:orf19.6170 species:5476 "Candida albicans" [GO:0035371
"microtubule plus end" evidence=IEA] [GO:0005816 "spindle pole
body" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0051285 "cell cortex of cell tip" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0000778 "condensed nuclear
chromosome kinetochore" evidence=IEA] [GO:0005876 "spindle
microtubule" evidence=IEA] [GO:0030437 "ascospore formation"
evidence=IEA] [GO:0051519 "activation of bipolar cell growth"
evidence=IEA] [GO:0000022 "mitotic spindle elongation"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0046785 "microtubule polymerization"
evidence=IEA] [GO:0000742 "karyogamy involved in conjugation with
cellular fusion" evidence=IEA] [GO:0000743 "nuclear migration
involved in conjugation with cellular fusion" evidence=IEA]
[GO:0031115 "negative regulation of microtubule polymerization"
evidence=IEA] [GO:0010570 "regulation of filamentous growth"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
InterPro:IPR000938 CGD:CAL0006089 Pfam:PF01302 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
eggNOG:NOG254865 InterPro:IPR009053 SUPFAM:SSF46579
EMBL:AACQ01000225 RefSeq:XP_710927.1 GeneID:3647457
KEGG:cal:CaO19.6170 Uniprot:Q59MK2
Length = 292
Score = 123 (48.4 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 29/81 (35%), Positives = 51/81 (62%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGN-----GKHDGSINGVRYFQAK 65
+G +V + A G ++YVG++QG GT+ GV+ G GK+ GS++G++YFQ +
Sbjct: 5 IGTKV-AIPGASGAGIIRYVGQIQGKIGTFAGVEL-LGTLATTRGKNSGSVDGIQYFQVE 62
Query: 66 SQKSGSFV---RVHNLSPGIS 83
KSG F+ R+ +++PG++
Sbjct: 63 IPKSGLFLPYERLKSVNPGLA 83
>UNIPROTKB|Q723K6 [details] [associations]
symbol:inlA "Internalin-A" species:265669 "Listeria
monocytogenes serotype 4b str. F2365" [GO:0003674
"molecular_function" evidence=ND] [GO:0009405 "pathogenesis"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00746 GO:GO:0005618
GO:GO:0005576 GO:GO:0009405 eggNOG:COG4886 InterPro:IPR014756
SUPFAM:SSF81296 EMBL:AE017262 GenomeReviews:AE017262_GR
GO:GO:0030260 InterPro:IPR025875 Pfam:PF12799 InterPro:IPR019948
InterPro:IPR019931 TIGRFAMs:TIGR01167 PROSITE:PS50847 EMBL:U25445
RefSeq:YP_013078.1 ProteinModelPortal:Q723K6 STRING:Q723K6
GeneID:2798475 KEGG:lmf:LMOf2365_0471 PATRIC:20322143 KO:K13730
OMA:NLTNINW ProtClustDB:CLSK225140 Gene3D:2.60.40.1220
InterPro:IPR014755 InterPro:IPR013378 InterPro:IPR012569
Pfam:PF09479 Pfam:PF08191 TIGRFAMs:TIGR02543 Uniprot:Q723K6
Length = 800
Score = 129 (50.5 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 58/196 (29%), Positives = 92/196 (46%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK--EVTGLPQLKSIRILV 211
I+TNL EL L GN L KDIG L L L+L+NN +S ++GL +L +++
Sbjct: 249 ILTNLDELSLNGNQL---KDIGTLAS-LTNLTDLDLANNQISNLAPLSGLTKLTELKL-- 302
Query: 212 LNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE 271
G N + L AL L L N + +I+P+S+ NL L L N I++
Sbjct: 303 ----GANQISNISPLAGLTALTNLELNENQLEDISPISN-----LKNLTYLTLYFNNISD 353
Query: 272 WSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLL-L 330
S + L + L++L+ N ++ + N T +SA + P NL + L
Sbjct: 354 ISPVSSLTK---LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLTRITQL 410
Query: 331 GNSKKLPTSSHVSFVV 346
G + + T+ V++ V
Sbjct: 411 GLNDQEWTNPPVNYKV 426
>FB|FBgn0038504 [details] [associations]
symbol:Sur-8 "Sur-8" species:7227 "Drosophila melanogaster"
[GO:0017016 "Ras GTPase binding" evidence=ISS] [GO:0000164 "protein
phosphatase type 1 complex" evidence=IEA] [GO:0046579 "positive
regulation of Ras protein signal transduction" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 InterPro:IPR027036 PROSITE:PS51450
EMBL:AE014297 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00600000084236
OMA:LPHGIGN PANTHER:PTHR23155:SF38 ChiTaRS:SHOC2 EMBL:AY128499
EMBL:BT003235 RefSeq:NP_650620.3 RefSeq:NP_732231.2
UniGene:Dm.13957 ProteinModelPortal:Q9VEK6 SMR:Q9VEK6 STRING:Q9VEK6
PaxDb:Q9VEK6 PRIDE:Q9VEK6 EnsemblMetazoa:FBtr0083447
EnsemblMetazoa:FBtr0083448 EnsemblMetazoa:FBtr0333933 GeneID:42093
KEGG:dme:Dmel_CG5407 UCSC:CG5407-RA CTD:42093 FlyBase:FBgn0038504
InParanoid:Q8MQM0 OrthoDB:EOG4C867K PhylomeDB:Q9VEK6
GenomeRNAi:42093 NextBio:827133 Bgee:Q9VEK6 Uniprot:Q9VEK6
Length = 641
Score = 127 (49.8 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 53/172 (30%), Positives = 85/172 (49%)
Query: 122 DKIQ-DKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQ 180
DKI FS+ + LT + +++ +IGT V N+ EL+L N L D
Sbjct: 428 DKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWV-NMVELNLATNALQKLPDDIM---N 483
Query: 181 LPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGN 240
L L +L LSNN++ K + L+ +RIL L N ++E+L H + L EL +
Sbjct: 484 LQNLEILILSNNMLKKIPNTIGNLRKLRILDLE---EN--RIEVLPHEIGLLHELQRLIL 538
Query: 241 SISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKN 292
++IT + I NL L++ +N + E ++ + SLE LY+N+N
Sbjct: 539 QTNQITMLPRSIGH-LGNLTHLSVSENNLQFLPE--EIGSLESLENLYINQN 587
>SGD|S000006095 [details] [associations]
symbol:NIP100 "Large subunit of the dynactin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0000235 "astral
microtubule" evidence=IDA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0000922 "spindle pole" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005816
"spindle pole body" evidence=IDA] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0008017 "microtubule
binding" evidence=ISS] [GO:0005869 "dynactin complex" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0003774 "motor
activity" evidence=IEA] [GO:0030286 "dynein complex" evidence=IEA]
InterPro:IPR000938 SGD:S000006095 Pfam:PF01302 GO:GO:0000132
GO:GO:0005737 EMBL:BK006949 GO:GO:0005869 GO:GO:0008017
GO:GO:0000922 eggNOG:COG5244 GO:GO:0005874 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0030286 GO:GO:0003774 EMBL:X72227 EMBL:Z73530 PIR:S65186
RefSeq:NP_015151.1 ProteinModelPortal:P33420 SMR:P33420
DIP:DIP-1473N IntAct:P33420 MINT:MINT-389199 STRING:P33420
PRIDE:P33420 EnsemblFungi:YPL174C GeneID:855929 KEGG:sce:YPL174C
CYGD:YPL174c GeneTree:ENSGT00700000104543 OMA:TIAHESA
OrthoDB:EOG4ZGSMC NextBio:980666 Genevestigator:P33420
GermOnline:YPL174C Uniprot:P33420
Length = 868
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 62/254 (24%), Positives = 120/254 (47%)
Query: 3 DCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
D N + L V N+ + G VK++GE Q G W G++ D GK+DGS NG+RYF
Sbjct: 9 DTNMQKISLQDTV-LVNEMK--GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYF 65
Query: 63 QAKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIE-LVGK 121
+K+ S + L + L+ Y K ++DE +L+ + +I+ L K
Sbjct: 66 DIDLKKANSNGGYYGL---FCKKDTLQF-Y-----KPDDDEHSLLNGNAAQETIKNLQVK 116
Query: 122 -DKIQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWK-DIGAFGE 179
+ + K +K + + + L V N +++ + LD L+ + K + G
Sbjct: 117 CESLASKLNKIK-IENHELK-TSVEKLSTNETVLLSKISRLD---KLVKELKVENGNMKT 171
Query: 180 QLPALA-VLNLSNNLMSKEVTGLPQLKSIRIL--VLNCTGVNW-----MQVEILKHSLPA 231
L +L+ S+++M+ ++ L+ +L +L+ T +++ +Q ++L+ +
Sbjct: 172 HLDNFNHLLDASDSVMAPDLDKGTLLERSHLLQGLLDQTKLSYDKAMKVQEDLLEENTQL 231
Query: 232 LEELHLMGNSISEI 245
LEE ++ IS++
Sbjct: 232 LEENAVLSKKISDL 245
>UNIPROTKB|Q81YT0 [details] [associations]
symbol:BAS0520 "Putative internalin" species:1392 "Bacillus
anthracis" [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 121 KDKIQDKFSKFEELTSAA-LPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGE 179
K+ I D FS E +T+ L V+ A + + NLK +DL+ N + D K + + +
Sbjct: 559 KEGITD-FSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLED 617
Query: 180 ------------------QLPALAVLNLSNN-LMSKEVTGLPQLKSIRILVLNCTGVNWM 220
++ L L+LSNN L + + G+ QL+++ L++N +N +
Sbjct: 618 LEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINNL 677
Query: 221 QVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQ 280
EI K S L +L +M N + +I+P++S NLQ LNL DN I + S + +
Sbjct: 678 D-EISKVS--KLNKLEMMSNKVRDISPLAS-----LKNLQWLNLSDNKIQDISTLSSMLD 729
Query: 281 IRSLE 285
+ SL+
Sbjct: 730 LLSLK 734
>TIGR_CMR|BA_0552 [details] [associations]
symbol:BA_0552 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0003674 "molecular_function"
evidence=ND] [GO:0009405 "pathogenesis" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF05031 EMBL:AE016879
EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
HSSP:P25147 InterPro:IPR019931 TIGRFAMs:TIGR01167
Gene3D:2.60.40.1220 InterPro:IPR014755 InterPro:IPR006635
PROSITE:PS50978 RefSeq:NP_843087.1 RefSeq:YP_017174.1
RefSeq:YP_026798.1 ProteinModelPortal:Q81YT0
EnsemblBacteria:EBBACT00000010697 EnsemblBacteria:EBBACT00000017841
EnsemblBacteria:EBBACT00000022856 GeneID:1087882 GeneID:2817231
GeneID:2849896 KEGG:ban:BA_0552 KEGG:bar:GBAA_0552 KEGG:bat:BAS0520
HOGENOM:HOG000083246 OMA:GLEYMTN ProtClustDB:CLSK915856
BioCyc:BANT260799:GJAJ-580-MONOMER
BioCyc:BANT261594:GJ7F-607-MONOMER Uniprot:Q81YT0
Length = 1070
Score = 129 (50.5 bits), Expect = 0.00010, P = 0.00010
Identities = 54/185 (29%), Positives = 91/185 (49%)
Query: 121 KDKIQDKFSKFEELTSAA-LPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGE 179
K+ I D FS E +T+ L V+ A + + NLK +DL+ N + D K + + +
Sbjct: 559 KEGITD-FSGLEFMTNVEELTLQNVNMKNAEFISSLRNLKSVDLSYNQIEDIKPLHSLED 617
Query: 180 ------------------QLPALAVLNLSNN-LMSKEVTGLPQLKSIRILVLNCTGVNWM 220
++ L L+LSNN L + + G+ QL+++ L++N +N +
Sbjct: 618 LEKLNVSDNGIKNVPELFKMQKLKTLDLSNNKLDNAALDGIHQLENLDALLVNNNEINNL 677
Query: 221 QVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQ 280
EI K S L +L +M N + +I+P++S NLQ LNL DN I + S + +
Sbjct: 678 D-EISKVS--KLNKLEMMSNKVRDISPLAS-----LKNLQWLNLSDNKIQDISTLSSMLD 729
Query: 281 IRSLE 285
+ SL+
Sbjct: 730 LLSLK 734
>TAIR|locus:2076224 [details] [associations]
symbol:EMB2804 "AT3G10220" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
"cytoplasm" evidence=ISM;IDA] [GO:0007021 "tubulin complex
assembly" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0009524 "phragmoplast" evidence=IDA] [GO:0009790 "embryo
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005634
EMBL:CP002686 GO:GO:0051301 GO:GO:0009790 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS50245 GO:GO:0009524
UniGene:At.1532 UniGene:At.71154 UniGene:At.71830 OMA:GKHDGMV
EMBL:AK176183 EMBL:AK176266 IPI:IPI00518736 RefSeq:NP_187633.2
PDB:2KJ6 PDBsum:2KJ6 ProteinModelPortal:Q67Z52 SMR:Q67Z52
STRING:Q67Z52 PRIDE:Q67Z52 EnsemblPlants:AT3G10220.1 GeneID:820184
KEGG:ath:AT3G10220 TAIR:At3g10220 InParanoid:Q67Z52
PhylomeDB:Q67Z52 ProtClustDB:CLSN2690532 EvolutionaryTrace:Q67Z52
Genevestigator:Q67Z52 Uniprot:Q67Z52
Length = 243
Score = 119 (46.9 bits), Expect = 0.00011, P = 0.00011
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYS-GTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
K+G R +R G VKYVG + G W+G+ +D GKHDG + G R+F+ +
Sbjct: 160 KVGDRCQVEPGEKR-GMVKYVGRAESLGPGYWVGIQYDEPLGKHDGMVKGTRFFECP-RL 217
Query: 69 SGSFVRVHNLSPGISLPE 86
G VR + G PE
Sbjct: 218 QGGMVRPDKVKVG-DYPE 234
>UNIPROTKB|I3LEB7 [details] [associations]
symbol:PODN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] [GO:0032934 "sterol binding"
evidence=IEA] Pfam:PF00560 InterPro:IPR001611 InterPro:IPR003033
Pfam:PF02036 PROSITE:PS51450 GO:GO:0005737 GO:GO:0008285
GO:GO:0005615 InterPro:IPR003591 SMART:SM00369 GO:GO:0030336
GO:GO:0032934 SUPFAM:SSF55718 GeneTree:ENSGT00600000084286
OMA:SGNRLHT EMBL:CU633966 EMBL:CU457407 Ensembl:ENSSSCT00000023638
Uniprot:I3LEB7
Length = 642
Score = 126 (49.4 bits), Expect = 0.00011, P = 0.00011
Identities = 54/176 (30%), Positives = 89/176 (50%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LT+ L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 172 FEHLTN--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 226
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 227 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 280
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRI 297
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 281 EKIPP---GVFSELSNLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRV 333
>UNIPROTKB|Q96M69 [details] [associations]
symbol:LRGUK "Leucine-rich repeat and guanylate kinase
domain-containing protein" species:9606 "Homo sapiens" [GO:0005524
"ATP binding" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] InterPro:IPR001611 InterPro:IPR008144
InterPro:IPR008145 Pfam:PF00625 PROSITE:PS50052 PROSITE:PS51450
SMART:SM00072 GO:GO:0005524 eggNOG:COG4886 GO:GO:0016301
EMBL:CH236950 EMBL:CH471070 InterPro:IPR025875 Pfam:PF12799
PROSITE:PS00856 EMBL:AK057348 EMBL:BC104897 EMBL:BC104899
IPI:IPI00065364 RefSeq:NP_653249.1 UniGene:Hs.149774 HSSP:Q64520
ProteinModelPortal:Q96M69 SMR:Q96M69 PhosphoSite:Q96M69
DMDM:74732316 PaxDb:Q96M69 PRIDE:Q96M69 DNASU:136332
Ensembl:ENST00000285928 GeneID:136332 KEGG:hsa:136332
UCSC:uc003vrm.1 CTD:136332 GeneCards:GC07P133812 HGNC:HGNC:21964
HPA:HPA021275 HPA:HPA024584 HPA:HPA029505 HPA:HPA029506
neXtProt:NX_Q96M69 PharmGKB:PA162394330 HOGENOM:HOG000113379
HOVERGEN:HBG108326 InParanoid:Q96M69 OMA:IDISILC OrthoDB:EOG4RFKRX
PhylomeDB:Q96M69 GenomeRNAi:136332 NextBio:83586 Bgee:Q96M69
CleanEx:HS_LRGUK Genevestigator:Q96M69 Uniprot:Q96M69
Length = 825
Score = 127 (49.8 bits), Expect = 0.00012, P = 0.00012
Identities = 54/193 (27%), Positives = 95/193 (49%)
Query: 123 KIQDKFSKFEELTSAA-LPYL-GVSSPGANIGTIVT-----NLKELDLTGNLLSDWKDIG 175
K+ +K E+L+ + +PYL +++ N+ T NLK+ D + N +S+ D+
Sbjct: 153 KLDLSANKIEDLSCVSCMPYLLELNASQNNLTTFFNFKPPKNLKKADFSHNQISEICDLS 212
Query: 176 AF---------GEQLPALAVLNLSNNLM-----SKEVTGLPQLKSIRILVLNCTGVNWMQ 221
A+ G ++ ++ L + NNL+ + ++T + L + I +L C N Q
Sbjct: 213 AYHALTKLILDGNEIEEISGLEMCNNLIHLSLANNKITTINGLNKLPIKIL-CLSNN--Q 269
Query: 222 VEILK--HSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLC 279
+E++ L AL+ L L N IS + + + D L+++NLEDN IAE EI +
Sbjct: 270 IEMITGLEDLKALQNLDLSHNQISSLQGL-----ENHDLLEVINLEDNKIAELREIEYIK 324
Query: 280 QIRSLEQLYLNKN 292
+ L L L +N
Sbjct: 325 NLPILRVLNLLEN 337
>UNIPROTKB|F5H270 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0035371 "microtubule plus end" evidence=IEA] InterPro:IPR000938
Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS50245 GO:GO:0005881 HGNC:HGNC:10461 ChiTaRS:CLIP1
EMBL:AC048338 EMBL:AC127002 EMBL:AC079406 EMBL:AC093016
IPI:IPI01010481 ProteinModelPortal:F5H270 SMR:F5H270
Ensembl:ENST00000535290 ArrayExpress:F5H270 Bgee:F5H270
Uniprot:F5H270
Length = 108
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRY 61
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRY
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRY 108
>WB|WBGene00011637 [details] [associations]
symbol:T09A5.9 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0009792 GO:GO:0006898 eggNOG:COG4886 GO:GO:0040011
GO:GO:0040035 EMBL:Z36753 InterPro:IPR003603 SMART:SM00446
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097777
HOGENOM:HOG000211189 PIR:T24722 RefSeq:NP_495653.1
ProteinModelPortal:P45969 SMR:P45969 STRING:P45969 PaxDb:P45969
EnsemblMetazoa:T09A5.9.1 EnsemblMetazoa:T09A5.9.2 GeneID:174266
KEGG:cel:CELE_T09A5.9 UCSC:T09A5.9.2 CTD:174266 WormBase:T09A5.9
InParanoid:P45969 OMA:LPNEIEQ NextBio:883295 Uniprot:P45969
Length = 326
Score = 121 (47.7 bits), Expect = 0.00014, P = 0.00014
Identities = 59/200 (29%), Positives = 97/200 (48%)
Query: 107 LSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVS--SPGANIGTIVTNLKELDLT 164
L K ++ LV +KI+ K E LT L LG + NIG +V NL EL +
Sbjct: 121 LDKLTKLETLYLVS-NKIE-KIENLEALTQLKLLELGDNRIKKIENIGHLV-NLDELFIG 177
Query: 165 GNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEI 224
N + + + E L L+VL+L N + K + + QL +++ L L+ G+ +I
Sbjct: 178 KNKIRQLEGV----ETLQKLSVLSLPGNRIVK-IENVEQLNNLKELYLSDQGLQ----DI 228
Query: 225 LKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSL 284
H + L L L+ + +EI S V+ ++L DN + +SEI +L +++ L
Sbjct: 229 --HGVEPLTNLLLLDVANNEIKTFSG--VERLESLNDFWANDNKVESFSEIEQLSKLKGL 284
Query: 285 EQLYLNKNNLNRIYYPNNDT 304
+ +YL +N Y+ NDT
Sbjct: 285 QTVYLERNPF---YF--NDT 299
>CGD|CAL0005838 [details] [associations]
symbol:NIP100 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0000132 "establishment of
mitotic spindle orientation" evidence=IMP] [GO:0005869 "dynactin
complex" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
[GO:0005816 "spindle pole body" evidence=IEA] [GO:0000235 "astral
microtubule" evidence=IEA] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQ 67
S+++GQ V ND IG++KY+G + G W G++ GK++GS+ GV+YF K
Sbjct: 2 SFEIGQSVVVKND---IGSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKED 58
Query: 68 KSGSF 72
+G +
Sbjct: 59 DNGFY 63
>UNIPROTKB|Q5A6R8 [details] [associations]
symbol:NIP100 "Putative uncharacterized protein NIP100"
species:237561 "Candida albicans SC5314" [GO:0000132 "establishment
of mitotic spindle orientation" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000938 CGD:CAL0005838
Pfam:PF01302 GO:GO:0000132 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
EMBL:AACQ01000055 EMBL:AACQ01000054 RefSeq:XP_717349.1
RefSeq:XP_717438.1 ProteinModelPortal:Q5A6R8 GeneID:3640863
GeneID:3640970 KEGG:cal:CaO19.486 KEGG:cal:CaO19.8116
Uniprot:Q5A6R8
Length = 895
Score = 127 (49.8 bits), Expect = 0.00014, P = 0.00014
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQ 67
S+++GQ V ND IG++KY+G + G W G++ GK++GS+ GV+YF K
Sbjct: 2 SFEIGQSVVVKND---IGSIKYIGTTKFAPGVWYGIELLQPKGKNNGSVQGVKYFDCKED 58
Query: 68 KSGSF 72
+G +
Sbjct: 59 DNGFY 63
>RGD|1309965 [details] [associations]
symbol:Tbcb "tubulin folding cofactor B" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=ISO]
InterPro:IPR000938 Pfam:PF01302 RGD:1309965 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
HOVERGEN:HBG003239 EMBL:DQ447885 IPI:IPI00364093 UniGene:Rn.9550
ProteinModelPortal:Q1W1V7 SMR:Q1W1V7 STRING:Q1W1V7 PRIDE:Q1W1V7
UCSC:RGD:1309965 InParanoid:Q1W1V7 ArrayExpress:Q1W1V7
Genevestigator:Q1W1V7 Uniprot:Q1W1V7
Length = 244
Score = 118 (46.6 bits), Expect = 0.00015, P = 0.00015
Identities = 29/86 (33%), Positives = 46/86 (53%)
Query: 3 DCNPESYKLGQR--VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVR 60
+ + +G R V + + GTV YVG G W+GV + GK+DGS+NG R
Sbjct: 153 EAQASAISVGSRCEVRAPGQSLHRGTVMYVGLTDFKPGYWVGVRYGEPLGKNDGSVNGKR 212
Query: 61 YFQAKSQKSGSFVRVHNLSPGISLPE 86
YF+ ++ + G+FV+ ++ G PE
Sbjct: 213 YFECQA-RYGAFVKPAAVTVG-DFPE 236
>POMBASE|SPAC27D7.13c [details] [associations]
symbol:ssm4 "dynactin microtubule-binding subunit,
p150-Glued Ssm4" species:4896 "Schizosaccharomyces pombe"
[GO:0000743 "nuclear migration involved in conjugation with
cellular fusion" evidence=IMP] [GO:0000753 "cell morphogenesis
involved in conjugation with cellular fusion" evidence=IGI;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005816 "spindle
pole body" evidence=IDA] [GO:0005869 "dynactin complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule" evidence=IDA]
[GO:0007127 "meiosis I" evidence=IGI] [GO:0007129 "synapsis"
evidence=IMP] [GO:0007131 "reciprocal meiotic recombination"
evidence=IMP] [GO:0008017 "microtubule binding" evidence=ISM]
[GO:0015630 "microtubule cytoskeleton" evidence=IDA] [GO:0030437
"ascospore formation" evidence=IGI] [GO:0030981 "cortical
microtubule cytoskeleton" evidence=IDA] [GO:0030989 "dynein-driven
meiotic oscillatory nuclear movement" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] [GO:0051010
"microtubule plus-end binding" evidence=NAS] InterPro:IPR000938
PomBase:SPAC27D7.13c Pfam:PF01302 EMBL:CU329670 GO:GO:0005816
GO:GO:0034613 GenomeReviews:CU329670_GR GO:GO:0005869 GO:GO:0000753
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0030437 GO:GO:0005881
GO:GO:0051010 GO:GO:0030989 GO:GO:0007131 GO:GO:0000743
GO:GO:0030981 GO:GO:0007129 OrthoDB:EOG4ZGSMC EMBL:AB000269
PIR:T38446 PIR:T38993 RefSeq:NP_594619.1 ProteinModelPortal:O42667
IntAct:O42667 STRING:O42667 EnsemblFungi:SPAC27D7.13c.1
GeneID:2542069 KEGG:spo:SPAC27D7.13c NextBio:20803142
GermOnline:SPAC27D7.13c Uniprot:O42667
Length = 670
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 28/74 (37%), Positives = 41/74 (55%)
Query: 24 IGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGIS 83
+G V++ G SG WLGV+ G GK+DGS+ G RYF + K G FVR + S +
Sbjct: 16 LGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGK-GIFVRACS-SNVMK 73
Query: 84 LPEALRVRYRGESS 97
P ++ R +G +
Sbjct: 74 RPSVVKSRKKGSEN 87
>MGI|MGI:1921604 [details] [associations]
symbol:Lrguk "leucine-rich repeats and guanylate kinase
domain containing" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR008144 InterPro:IPR008145
Pfam:PF00625 PROSITE:PS50052 PROSITE:PS51450 SMART:SM00072
MGI:MGI:1921604 GO:GO:0005524 eggNOG:COG4886 GO:GO:0016301
InterPro:IPR025875 Pfam:PF12799 GeneTree:ENSGT00670000097803
HSSP:Q64520 CTD:136332 HOGENOM:HOG000113379 HOVERGEN:HBG108326
OMA:IDISILC OrthoDB:EOG4RFKRX EMBL:AK014976 IPI:IPI00108378
RefSeq:NP_083162.1 UniGene:Mm.127952 ProteinModelPortal:Q9D5S7
SMR:Q9D5S7 PhosphoSite:Q9D5S7 PRIDE:Q9D5S7
Ensembl:ENSMUST00000070189 GeneID:74354 KEGG:mmu:74354
UCSC:uc009bgv.1 InParanoid:Q9D5S7 NextBio:340521 Bgee:Q9D5S7
Genevestigator:Q9D5S7 Uniprot:Q9D5S7
Length = 820
Score = 126 (49.4 bits), Expect = 0.00016, P = 0.00016
Identities = 56/186 (30%), Positives = 91/186 (48%)
Query: 129 SKFEELTSAA-LPYLGVSSPGAN-IGTIVT-----NLKELDLTGNLLSDWKDIGAFGEQL 181
++ E+L+ + +PYL + N + T NLK++D + NL+S+ D+ A+
Sbjct: 159 NRIEDLSCVSCMPYLLELNASQNKLTTFFNFKPPQNLKKVDFSSNLISEMYDLSAYH--- 215
Query: 182 PALAVLNLSNNLMSKEVTGLPQLKSIRILVL------NCTGVNWMQVEILKHS------L 229
L L L NN + +E+TGL S+ L L G+ + +++L S +
Sbjct: 216 -TLTQLILDNNEI-EEITGLENCISLTHLSLAGNKITTIKGLGTLPIKVLSLSNNMIETI 273
Query: 230 PALEELHLMGNSISEITPVSSPIVQGFDN---LQLLNLEDNCIAEWSEILKLCQIRSLEQ 286
LEEL + N +SS +QG +N L+++NLEDN I E SEI + + L
Sbjct: 274 TGLEELKALQNLDLSHNQISS--LQGLENHDLLEVINLEDNKIKELSEIEYIENLPILRV 331
Query: 287 LYLNKN 292
L L +N
Sbjct: 332 LNLLRN 337
>UNIPROTKB|J9P0I9 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000938
InterPro:IPR004827 SMART:SM00338 Pfam:PF01302 GO:GO:0043565
GO:GO:0003700 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03004228 EMBL:AAEX03004229 EMBL:AAEX03004230
Ensembl:ENSCAFT00000048444 Uniprot:J9P0I9
Length = 702
Score = 125 (49.1 bits), Expect = 0.00017, P = 0.00017
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 223 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 279
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 280 GLFAPIHKV 288
Score = 118 (46.6 bits), Expect = 0.00097, P = 0.00097
Identities = 28/71 (39%), Positives = 41/71 (57%)
Query: 9 YKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQK 68
+ +G+RV N + G V+Y+GE Q G W GV D GK+DG++ GVRYF+ + +
Sbjct: 82 FAVGERVW-VNGVKP-GVVQYLGETQFAPGQWAGVVLDEPVGKNDGAVGGVRYFECPALQ 139
Query: 69 SGSFVRVHNLS 79
G F R L+
Sbjct: 140 -GIFTRPSKLT 149
>ZFIN|ZDB-GENE-040718-372 [details] [associations]
symbol:lrrc57 "leucine rich repeat containing 57"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040718-372
eggNOG:COG4886 InterPro:IPR025875 Pfam:PF12799 HOGENOM:HOG000116557
GeneTree:ENSGT00700000104417 EMBL:BC075955 IPI:IPI00511290
RefSeq:NP_001002627.1 UniGene:Dr.84455 ProteinModelPortal:Q6DHL5
STRING:Q6DHL5 PRIDE:Q6DHL5 Ensembl:ENSDART00000064515
Ensembl:ENSDART00000114270 GeneID:436900 KEGG:dre:436900 CTD:255252
HOVERGEN:HBG054710 InParanoid:Q6DHL5 OMA:ERYTATK OrthoDB:EOG4F1X40
NextBio:20831327 Bgee:Q6DHL5 Uniprot:Q6DHL5
Length = 238
Score = 116 (45.9 bits), Expect = 0.00023, P = 0.00023
Identities = 49/182 (26%), Positives = 89/182 (48%)
Query: 94 GESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGT 153
G+ E +++ L+A+ + V + +++ F+ L S + ++S +IG
Sbjct: 23 GKGLTEFPEDLQKLTANLRTVDLSNNKIEELPAFIGSFQHLKSFTISCNKLTSLPNDIGK 82
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLN 213
+ L+ L L GN L K + + QL +L L+LS N + +GL L+ + +L L+
Sbjct: 83 L-KKLETLILNGNQL---KQLPSSIGQLKSLRTLSLSGNQFKEFPSGLGTLRQLDVLDLS 138
Query: 214 CTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWS 273
+ + E+ + L A+E ++L N IS +T V L++L LE+NC+ E S
Sbjct: 139 KNQIRVVPAEVAE--LQAIE-INLNQNQISSVTQE----VSRTPRLKVLRLEENCL-ELS 190
Query: 274 EI 275
I
Sbjct: 191 SI 192
>FB|FBgn0020503 [details] [associations]
symbol:CLIP-190 "Cytoplasmic linker protein 190" species:7227
"Drosophila melanogaster" [GO:0008017 "microtubule binding"
evidence=ISS;IDA] [GO:0005875 "microtubule associated complex"
evidence=ISS;IDA] [GO:0003779 "actin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0007349 "cellularization" evidence=IMP] [GO:0007017
"microtubule-based process" evidence=ISS] [GO:0045169 "fusome"
evidence=IDA] [GO:0005876 "spindle microtubule" evidence=IDA]
[GO:0051010 "microtubule plus-end binding" evidence=IDA]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0035371 "microtubule
plus end" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
GO:GO:0005794 GO:GO:0005875 GO:GO:0003779 GO:GO:0000776
EMBL:AE014134 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0007017
GO:GO:0051010 GO:GO:0005876 GO:GO:0007349 GO:GO:0045169
EMBL:AF041382 EMBL:AY118896 EMBL:BT011136 PIR:T13030
RefSeq:NP_001162996.1 RefSeq:NP_609835.2 RefSeq:NP_724047.2
RefSeq:NP_724048.1 UniGene:Dm.3487 ProteinModelPortal:Q9VJE5
SMR:Q9VJE5 DIP:DIP-21005N IntAct:Q9VJE5 MINT:MINT-764195
STRING:Q9VJE5 PaxDb:Q9VJE5 PRIDE:Q9VJE5 EnsemblMetazoa:FBtr0080976
EnsemblMetazoa:FBtr0332456 GeneID:35042 KEGG:dme:Dmel_CG5020
CTD:35042 FlyBase:FBgn0020503 GeneTree:ENSGT00700000104055
InParanoid:Q9VJE5 OMA:REEQNKF OrthoDB:EOG40RXWH PhylomeDB:Q9VJE5
ChiTaRS:CLIP-190 GenomeRNAi:35042 NextBio:791511 Bgee:Q9VJE5
GermOnline:CG5020 Uniprot:Q9VJE5
Length = 1690
Score = 134 (52.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 33/90 (36%), Positives = 52/90 (57%)
Query: 11 LGQRVH-SANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+G RV S+ R G ++Y+GE Q G W GV+ D +GK+DG+++ +RYF+ K K
Sbjct: 239 VGDRVIVSSGFGSRPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKP-KY 297
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKE 99
G FV + +S +S P + + R S+E
Sbjct: 298 GVFVPIAKVS--LS-PSSKKTRLSRTGSRE 324
Score = 129 (50.5 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 29/75 (38%), Positives = 42/75 (56%)
Query: 5 NPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQA 64
N E + +GQRV R G + ++G+ +G W GV D NGK+DG ++G RYFQ
Sbjct: 119 NTEQFIIGQRVWLGGT--RPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQC 176
Query: 65 KSQKSGSFVRVHNLS 79
+ K G F R+ L+
Sbjct: 177 EP-KRGIFSRLTRLT 190
Score = 42 (19.8 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 95 ESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFSKFE 132
E + E+ Y L+ + ELV KD+ +KFS E
Sbjct: 514 EEQRLRENVKY-LNEQIATLQSELVSKDEALEKFSLSE 550
Score = 39 (18.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 10/19 (52%), Positives = 12/19 (63%)
Query: 119 VGKDKIQDKFSKFEELTSA 137
V K+KI D SK +L SA
Sbjct: 449 VYKEKIHDLESKITKLVSA 467
>ZFIN|ZDB-GENE-051113-288 [details] [associations]
symbol:ppp1r7 "protein phosphatase 1, regulatory
(inhibitor) subunit 7" species:7955 "Danio rerio" [GO:0008150
"biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
ZFIN:ZDB-GENE-051113-288 GO:GO:0005634 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
GeneTree:ENSGT00670000097777 CTD:5510 HOGENOM:HOG000211189
HOVERGEN:HBG082161 OMA:PQYRRKI OrthoDB:EOG4894MX EMBL:BC108074
IPI:IPI00501923 RefSeq:NP_001032463.1 UniGene:Dr.76971
ProteinModelPortal:Q32PL1 STRING:Q32PL1 Ensembl:ENSDART00000022356
GeneID:560323 KEGG:dre:560323 InParanoid:Q32PL1 NextBio:20883385
Bgee:Q32PL1 Uniprot:Q32PL1
Length = 345
Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
Identities = 70/258 (27%), Positives = 115/258 (44%)
Query: 54 GSINGVRYF-QAK--SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEE----DEMYV 106
G I G+ +AK S + R+ NL +SL E L + Y + K E E+
Sbjct: 74 GKIEGLEVLLKAKTISLRQNLIKRIENLESLVSLRE-LDL-YDNQIRKLENLQALTELEQ 131
Query: 107 LSAS-NKHVSIE-LVGKDKIQDKFSKFEELTSAA----LPYLGVSSPGANIGTIVTNLKE 160
L S N IE L K++ F ++ S A L L + G+N ++ NL
Sbjct: 132 LDVSFNLLRKIEGLDSLTKVKKLFLLHNKIASIANLDHLTSLQMLELGSNRIRVIENLDS 191
Query: 161 LDLTGNLLSDWKDIGAFG--EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVN 218
L +L I + L L VL++ +N ++K + GL L ++R L L+ G+
Sbjct: 192 LSSLESLFLGTNKITQLQNLDGLHNLTVLSIQSNRITK-LEGLQNLVNLRELYLSHNGIE 250
Query: 219 WMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKL 278
M E L+++ L L + N I +I +S +L+ + DN I W+++ +L
Sbjct: 251 VM--EGLENN-KKLSTLDIAANRIKKIENISH-----LTDLKEFWMNDNQIENWADLDEL 302
Query: 279 CQIRSLEQLYLNKNNLNR 296
+ LE +YL +N L +
Sbjct: 303 KNAKGLETVYLERNPLQK 320
>UNIPROTKB|Q9UDT6 [details] [associations]
symbol:CLIP2 "CAP-Gly domain-containing linker protein 2"
species:9606 "Homo sapiens" [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=TAS] InterPro:IPR000938 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881 Orphanet:904
HOGENOM:HOG000092755 HOVERGEN:HBG007123 EMBL:AB006629 EMBL:AC005015
EMBL:AF041059 EMBL:AF041055 EMBL:AF041056 EMBL:AF041057
EMBL:AF041058 IPI:IPI00019642 IPI:IPI00246616 RefSeq:NP_003379.3
RefSeq:NP_115797.1 UniGene:Hs.647018 PDB:2CP2 PDB:2CP3 PDBsum:2CP2
PDBsum:2CP3 ProteinModelPortal:Q9UDT6 SMR:Q9UDT6 IntAct:Q9UDT6
STRING:Q9UDT6 PhosphoSite:Q9UDT6 DMDM:74753268 PaxDb:Q9UDT6
PRIDE:Q9UDT6 DNASU:7461 Ensembl:ENST00000223398
Ensembl:ENST00000361545 Ensembl:ENST00000395060
Ensembl:ENST00000573159 Ensembl:ENST00000575290
Ensembl:ENST00000575893 GeneID:7461 KEGG:hsa:7461 UCSC:uc003uam.3
CTD:7461 GeneCards:GC07P073703 HGNC:HGNC:2586 HPA:CAB020767
HPA:HPA020430 MIM:603432 neXtProt:NX_Q9UDT6 PharmGKB:PA27085
KO:K10422 OMA:HWRAQLE PhylomeDB:Q9UDT6 ChiTaRS:CLIP2
EvolutionaryTrace:Q9UDT6 GenomeRNAi:7461 NextBio:29216
ArrayExpress:Q9UDT6 Bgee:Q9UDT6 CleanEx:HS_CLIP2
Genevestigator:Q9UDT6 GermOnline:ENSG00000106665 Uniprot:Q9UDT6
Length = 1046
Score = 125 (49.1 bits), Expect = 0.00027, P = 0.00027
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 220 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 276
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 277 GLFAPIHKV 285
>ZFIN|ZDB-GENE-040426-1130 [details] [associations]
symbol:chad "chondroadherin" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 ZFIN:ZDB-GENE-040426-1130
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
HSSP:Q9BZR6 CTD:1101 HOGENOM:HOG000013150 HOVERGEN:HBG005324
KO:K06248 OrthoDB:EOG4K9BCM InterPro:IPR026906 Pfam:PF13306
EMBL:BC054898 EMBL:CU468779 IPI:IPI00486284 RefSeq:NP_957357.1
UniGene:Dr.80402 IntAct:Q7SYE5 STRING:Q7SYE5 GeneID:394038
KEGG:dre:394038 InParanoid:Q7SYE5 NextBio:20815000 Uniprot:Q7SYE5
Length = 363
Score = 119 (46.9 bits), Expect = 0.00028, P = 0.00028
Identities = 51/172 (29%), Positives = 84/172 (48%)
Query: 128 FSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
FS+ + L S L + + + L L L+ N +S K GAF E L L L
Sbjct: 75 FSEMKGLISLHLQHCQIRELSGQAFKGLNKLIYLYLSDNEISTIKP-GAF-EDLTELTYL 132
Query: 188 NLSNNLMSKEVTGL--PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEI 245
L N ++ G+ P + ++ IL LN + +Q K + L L++ GN +S I
Sbjct: 133 YLDGNQITSLPKGIFSPMI-NLFILQLNNNKLRELQPGTFKGAKD-LRWLYMSGNELSSI 190
Query: 246 TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
P S V+ NL +L L+ N ++ + +L + ++R +E+L L+KN L+ I
Sbjct: 191 QPGSLDEVE---NLAILTLDQNNLSTYP-LLAMSKLRVVEELNLSKNPLSLI 238
>UNIPROTKB|E1BQI8 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:AADN02026009
IPI:IPI00579643 Ensembl:ENSGALT00000001972 Uniprot:E1BQI8
Length = 1040
Score = 125 (49.1 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 211 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 267
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 268 GLFAPIHKV 276
Score = 46 (21.3 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 88 LRVRYRGESSKEEEDEMYVLSASNKHVSIELVG-KDKIQ 125
L+ +Y ++ K+ + EM L A N+ S E+V K K+Q
Sbjct: 557 LKEKYE-KTLKKYQQEMEKLKAVNEKYSQEIVDLKHKVQ 594
>DICTYBASE|DDB_G0268578 [details] [associations]
symbol:gefV "leucine-rich repeat-containing protein
(LRR)" species:44689 "Dictyostelium discoideum" [GO:0030587
"sorocarp development" evidence=IMP] [GO:0051056 "regulation of
small GTPase mediated signal transduction" evidence=IEA]
[GO:0030036 "actin cytoskeleton organization" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001611 InterPro:IPR000651
InterPro:IPR001895 InterPro:IPR008937 InterPro:IPR010473
InterPro:IPR016024 InterPro:IPR019804 Pfam:PF00617 Pfam:PF00618
Pfam:PF06371 PROSITE:PS00720 PROSITE:PS50009 PROSITE:PS50212
PROSITE:PS51450 SMART:SM00147 SMART:SM00229 dictyBase:DDB_G0268578
GO:GO:0016021 GO:GO:0007264 GenomeReviews:CM000150_GR
SUPFAM:SSF48371 GO:GO:0030036 eggNOG:COG4886 GO:GO:0051056
EMBL:AAFI02000003 GO:GO:0030587 GO:GO:0005622 GO:GO:0005085
InterPro:IPR025875 Pfam:PF12799 Gene3D:1.10.840.10
InterPro:IPR023578 SUPFAM:SSF48366 InterPro:IPR014768
PROSITE:PS51232 PANTHER:PTHR23113 HSSP:Q07889 RefSeq:XP_647595.1
ProteinModelPortal:Q55FD8 STRING:Q55FD8 EnsemblProtists:DDB0231998
GeneID:8616407 KEGG:ddi:DDB_G0268578 InParanoid:Q55FD8 OMA:RIDSISC
Uniprot:Q55FD8
Length = 1982
Score = 121 (47.7 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 51/172 (29%), Positives = 91/172 (52%)
Query: 151 IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRIL 210
IG +T LK LDL+GN ++ + +F L +L LNL +N + L L + L
Sbjct: 184 IGDQLTTLKSLDLSGNTITSLPN--SFSN-LVSLTSLNLKSNKFTCFPPSLCTLDKLVHL 240
Query: 211 VLNCTGVNWMQVEILKHSL-----PALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLE 265
L+C N + V H+L P+LE+L L N + P+ I++ +L++L L+
Sbjct: 241 NLSC---NQILVSPSDHTLGVSLLPSLEKLELQHNRFAHF-PMD--ILE-IVSLRVLKLQ 293
Query: 266 DNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEE 317
DN I + + K+ + +L +L+L++N + ++ P+ TI EL++ + + E
Sbjct: 294 DNDIDKIPD--KIGNLLNLNELFLSENKITQL--PS--TIGELINLRKLYLE 339
Score = 56 (24.8 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 15/53 (28%), Positives = 28/53 (52%)
Query: 321 PFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLD 373
P+ L LL ++PT + V ++ FLI++FS+ ++I L + L+
Sbjct: 1076 PYVPLVALLRNPIIEMPTKTTVFKIINFLIYSFSVLEERFSVICSLLKVGILE 1128
>MGI|MGI:109347 [details] [associations]
symbol:Lum "lumican" species:10090 "Mus musculus" [GO:0005518
"collagen binding" evidence=ISO] [GO:0005576 "extracellular region"
evidence=IEA] [GO:0005578 "proteinaceous extracellular matrix"
evidence=ISO;IDA] [GO:0005583 "fibrillar collagen" evidence=ISO]
[GO:0005615 "extracellular space" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] InterPro:IPR001611 InterPro:IPR027219
PROSITE:PS51450 MGI:MGI:109347 GO:GO:0005615 GO:GO:0005578
GO:GO:0045944 eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GO:GO:0014070 GO:GO:0051216 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0070848 GO:GO:0005583
GeneTree:ENSGT00600000084286 HOGENOM:HOG000234447
HOVERGEN:HBG108061 CTD:4060 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
PANTHER:PTHR24371:SF1 EMBL:S79461 EMBL:AF013262 EMBL:AK014312
EMBL:AK075737 EMBL:AK164774 EMBL:BC005550 IPI:IPI00313900
RefSeq:NP_032550.2 UniGene:Mm.18888 ProteinModelPortal:P51885
SMR:P51885 STRING:P51885 PhosphoSite:P51885 PaxDb:P51885
PRIDE:P51885 Ensembl:ENSMUST00000038160 GeneID:17022 KEGG:mmu:17022
UCSC:uc007gwz.2 InParanoid:P51885 NextBio:291134 Bgee:P51885
CleanEx:MM_LUM Genevestigator:P51885 GermOnline:ENSMUSG00000036446
Uniprot:P51885
Length = 338
Score = 118 (46.6 bits), Expect = 0.00032, P = 0.00032
Identities = 61/218 (27%), Positives = 100/218 (45%)
Query: 118 LVGKDKIQDK-FSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGA 176
L+ KI+ K FSK ++L + Y ++ ++G + +L++L LT N +S +G+
Sbjct: 101 LLENSKIKGKVFSKLKQLKKLHINYNNLTE---SVGPLPKSLQDLQLTNNKISK---LGS 154
Query: 177 FGEQLPALAVLNLSNNLMSKEVTG--LPQLKSIRILVLNCTGVNWMQVEILKHSLP-ALE 233
F + L L + L +N + ++ L LKS+ L L+ + Q+ L LP +L
Sbjct: 155 F-DGLVNLTFIYLQHNQLKEDAVSASLKGLKSLEYLDLS-----FNQMSKLPAGLPTSLL 208
Query: 234 ELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
L+L N IS I P + F LQ L L N +A+ I SL +L L+ N
Sbjct: 209 TLYLDNNKISNI-P--DEYFKRFTGLQYLRLSHNELADSGVPGNSFNISSLLELDLSYNK 265
Query: 294 LNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLG 331
L I N + + + +E + F C +LG
Sbjct: 266 LKSIPTVNENLENYYLEVNELEKFDVKSF----CKILG 299
>UNIPROTKB|E1BHH6 [details] [associations]
symbol:PODN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030336 "negative regulation of cell migration"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
PROSITE:PS51450 GO:GO:0005737 GO:GO:0008285 GO:GO:0005615
InterPro:IPR003591 SMART:SM00369 GO:GO:0030336 InterPro:IPR000372
SMART:SM00013 GeneTree:ENSGT00600000084286 OMA:SGNRLHT
EMBL:DAAA02008856 IPI:IPI00697572 Ensembl:ENSBTAT00000016614
Uniprot:E1BHH6
Length = 661
Score = 122 (48.0 bits), Expect = 0.00033, P = 0.00033
Identities = 54/176 (30%), Positives = 89/176 (50%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LT+ L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 190 FEHLTN--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 244
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N +
Sbjct: 245 YLHNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKL 298
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRI 297
+I P + NL+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 299 EKIPPGA---FSELSNLRELYLQNNHLTDEGLDNETFWKLSSLEYLDLSSNNLSRV 351
>WB|WBGene00022789 [details] [associations]
symbol:lron-2 species:6239 "Caenorhabditis elegans"
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR001611 PROSITE:PS51450 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00700000104056 OMA:AMIKIGQ HSSP:P07359 EMBL:FO081193
PIR:T29972 RefSeq:NP_505402.1 ProteinModelPortal:Q23580 SMR:Q23580
STRING:Q23580 PaxDb:Q23580 EnsemblMetazoa:ZK682.5 GeneID:179309
KEGG:cel:CELE_ZK682.5 UCSC:ZK682.5 CTD:179309 WormBase:ZK682.5
eggNOG:NOG280691 HOGENOM:HOG000021591 InParanoid:Q23580
NextBio:904832 Uniprot:Q23580
Length = 575
Score = 121 (47.7 bits), Expect = 0.00035, P = 0.00035
Identities = 45/152 (29%), Positives = 71/152 (46%)
Query: 149 ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLS-NNLMSKEVTGLPQLKSI 207
AN T L+ L L N L + D G L +L L+L+ NNL TG+P+L+++
Sbjct: 76 ANAFQSFTILR-LVLNRNTLQNIDDQAFNGPLLDSLIELDLNDNNLGQIPQTGIPRLRNL 134
Query: 208 RILVLNCTGVNWMQVEILK--HSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLE 265
R L LN +N + S L +L L GN +++ T + + + LQ L+LE
Sbjct: 135 RKLYLNRNRINQLSSTAFNAFESRDLLLKLELAGNRLTDATLGDATVFRPLTLLQELSLE 194
Query: 266 DNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
N + + Q +L L L N++N +
Sbjct: 195 TNSLTSIPSSALVNQRNTLTNLNLGLNSINEV 226
>UNIPROTKB|E1BGH3 [details] [associations]
symbol:CLIP2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 OMA:HWRAQLE EMBL:DAAA02058193
IPI:IPI00716251 Ensembl:ENSBTAT00000015759 Uniprot:E1BGH3
Length = 1047
Score = 125 (49.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K
Sbjct: 219 RLGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KF 275
Query: 70 GSFVRVHNL 78
G F +H +
Sbjct: 276 GLFAPIHKV 284
Score = 45 (20.9 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 86 EALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDK 127
E L V Y+G++ E + + A K + EL+ + + Q K
Sbjct: 735 EKLDVEYQGQAQAIEFLKEQISLAEKKMLDYELLQRSEAQSK 776
>RGD|67404 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10116 "Rattus norvegicus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0005881
"cytoplasmic microtubule" evidence=ISO] [GO:0008017 "microtubule
binding" evidence=ISO;TAS] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0031116 "positive
regulation of microtubule polymerization" evidence=ISO] [GO:0035371
"microtubule plus end" evidence=ISO] [GO:0051010 "microtubule
plus-end binding" evidence=ISO] [GO:0044354 "macropinosome"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 SMART:SM00343
Pfam:PF01302 RGD:67404 GO:GO:0042803 GO:GO:0008270 GO:GO:0003676
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 HSSP:Q20728
IPI:IPI00201975 RefSeq:NP_113933.2 UniGene:Rn.22069 GeneID:65201
KEGG:rno:65201 NextBio:614156 EMBL:AJ237670
ProteinModelPortal:Q9JK25 SMR:Q9JK25 IntAct:Q9JK25 MINT:MINT-2738141
STRING:Q9JK25 PhosphoSite:Q9JK25 PRIDE:Q9JK25 UCSC:RGD:67404
ArrayExpress:Q9JK25 Genevestigator:Q9JK25 Uniprot:Q9JK25
Length = 1320
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 269 GLFAPVHKVTK-IGFP 283
Score = 123 (48.4 bits), Expect = 0.00059, P = 0.00059
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
>UNIPROTKB|F1MAH8 [details] [associations]
symbol:Clip1 "Protein Clip1" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 RGD:67404
GO:GO:0008270 GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GeneTree:ENSGT00700000104055 CTD:6249 KO:K10421 IPI:IPI00201975
RefSeq:NP_113933.2 UniGene:Rn.22069 PRIDE:F1MAH8
Ensembl:ENSRNOT00000001685 GeneID:65201 KEGG:rno:65201
NextBio:614156 ArrayExpress:F1MAH8 Uniprot:F1MAH8
Length = 1320
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 269 GLFAPVHKVTK-IGFP 283
Score = 123 (48.4 bits), Expect = 0.00059, P = 0.00059
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
>UNIPROTKB|E2QWB0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
CTD:6249 KO:K10421 OMA:MEMSHNQ EMBL:AAEX03014651
RefSeq:XP_003639950.1 Ensembl:ENSCAFT00000012632 GeneID:477461
KEGG:cfa:477461 Uniprot:E2QWB0
Length = 1438
Score = 124 (48.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 213 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 269
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 270 GLFAPVHKVTK-IGFP 284
Score = 124 (48.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLSPGISLPE 86
K G F R L+ + + +
Sbjct: 114 LK-GIFTRPSKLTRKVQVED 132
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 25/134 (18%), Positives = 61/134 (45%)
Query: 188 NLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEI 245
NL N S+ +++++R ++ +E +K L E+ HL M +++S++
Sbjct: 676 NLQNKQDSERSAHTKEIEALRGKLMAVVKEKESSLEAIKAKLDKAEDQHLVEMEDTLSKL 735
Query: 246 TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK--LCQIRSLEQLYLNKNNLNRIYYPNND 303
+ + + L++L + N E ++++ Q+++ E+ L+ + L +
Sbjct: 736 QEAETKVKE----LEVLQAKCN---EQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKS 788
Query: 304 TIHELVSAHESHEE 317
I +L E+ E+
Sbjct: 789 EIKKLRQQLEAAEK 802
>UNIPROTKB|E2QWD0 [details] [associations]
symbol:CLIP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000938
InterPro:IPR001878 SMART:SM00343 Pfam:PF01302 GO:GO:0008270
GO:GO:0003676 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GeneTree:ENSGT00700000104055
EMBL:AAEX03014651 Ensembl:ENSCAFT00000012621 NextBio:20852935
Uniprot:E2QWD0
Length = 1438
Score = 124 (48.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 213 KIGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 269
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 270 GLFAPVHKVTK-IGFP 284
Score = 124 (48.7 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 27/80 (33%), Positives = 46/80 (57%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLSPGISLPE 86
K G F R L+ + + +
Sbjct: 114 LK-GIFTRPSKLTRKVQVED 132
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 25/134 (18%), Positives = 61/134 (45%)
Query: 188 NLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHL--MGNSISEI 245
NL N S+ +++++R ++ +E +K L E+ HL M +++S++
Sbjct: 676 NLQNKQDSERSAHTKEIEALRGKLMAVVKEKESSLEAIKAKLDKAEDQHLVEMEDTLSKL 735
Query: 246 TPVSSPIVQGFDNLQLLNLEDNCIAEWSEILK--LCQIRSLEQLYLNKNNLNRIYYPNND 303
+ + + L++L + N E ++++ Q+++ E+ L+ + L +
Sbjct: 736 QEAETKVKE----LEVLQAKCN---EQTKVIDNFTSQLKATEEKLLDLDALRKASSEGKS 788
Query: 304 TIHELVSAHESHEE 317
I +L E+ E+
Sbjct: 789 EIKKLRQQLEAAEK 802
>UNIPROTKB|Q6UXM1 [details] [associations]
symbol:LRIG3 "Leucine-rich repeats and immunoglobulin-like
domains protein 3" species:9606 "Homo sapiens" [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] InterPro:IPR001611 InterPro:IPR007110 PROSITE:PS50835
PROSITE:PS51450 GO:GO:0016021 Gene3D:2.60.40.10 InterPro:IPR013783
InterPro:IPR003599 SMART:SM00409 InterPro:IPR003598 SMART:SM00408
eggNOG:COG4886 InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369
SMART:SM00082 InterPro:IPR013098 Pfam:PF07679 InterPro:IPR000372
SMART:SM00013 InterPro:IPR025875 Pfam:PF12799 CleanEx:HS_LIG3
HOGENOM:HOG000113380 HOVERGEN:HBG052353 EMBL:AY505340 EMBL:AY358288
EMBL:AY358295 EMBL:AK074921 IPI:IPI00184265 IPI:IPI00640455
RefSeq:NP_001129523.1 RefSeq:NP_700356.2 UniGene:Hs.253736
ProteinModelPortal:Q6UXM1 SMR:Q6UXM1 STRING:Q6UXM1
PhosphoSite:Q6UXM1 DMDM:73621176 PaxDb:Q6UXM1 PRIDE:Q6UXM1
Ensembl:ENST00000320743 Ensembl:ENST00000379141 GeneID:121227
KEGG:hsa:121227 UCSC:uc001sqr.3 UCSC:uc009zqh.3 CTD:121227
GeneCards:GC12M059265 HGNC:HGNC:30991 HPA:HPA010773 MIM:608870
neXtProt:NX_Q6UXM1 PharmGKB:PA134864136 InParanoid:Q6UXM1
OMA:SHHQFVT OrthoDB:EOG4K6G3K PhylomeDB:Q6UXM1 GenomeRNAi:121227
NextBio:80680 ArrayExpress:Q6UXM1 Bgee:Q6UXM1 CleanEx:HS_LRIG3
Genevestigator:Q6UXM1 GermOnline:ENSG00000139263 Uniprot:Q6UXM1
Length = 1119
Score = 123 (48.4 bits), Expect = 0.00049, P = 0.00049
Identities = 46/141 (32%), Positives = 67/141 (47%)
Query: 158 LKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVT-GLPQLKSIRILVLNCTG 216
L ELDLT N LS D G L L L++ NN +S L S++ L L
Sbjct: 313 LSELDLTFNHLSRLDDSSFLG--LSLLNTLHIGNNRVSYIADCAFRGLSSLKTLDLKNNE 370
Query: 217 VNWMQVEILKHSLPALEELH---LMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWS 273
++W +E + + L++L L GN I IT + G D L+ L+L DN I
Sbjct: 371 ISWT-IEDMNGAFSGLDKLRRLILQGNRIRSITKKA---FTGLDALEHLDLSDNAIMSLQ 426
Query: 274 EILKLCQIRSLEQLYLNKNNL 294
Q++ L+QL+LN ++L
Sbjct: 427 GNA-FSQMKKLQQLHLNTSSL 446
>GENEDB_PFALCIPARUM|MAL8P1.46 [details] [associations]
symbol:MAL8P1.46 "outer arm dynein light chain
2" species:5833 "Plasmodium falciparum" [GO:0003774 "motor
activity" evidence=ISS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0003774 HOGENOM:HOG000230603 KO:K10411 EMBL:AL844507
HSSP:Q9XHH2 RefSeq:XP_001349300.1 ProteinModelPortal:Q8IB59
EnsemblProtists:MAL8P1.46:mRNA GeneID:2655387 KEGG:pfa:MAL8P1.46
EuPathDB:PlasmoDB:PF3D7_0822500 OMA:FQYPPIE ProtClustDB:CLSZ2432051
Uniprot:Q8IB59
Length = 199
Score = 78 (32.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 14/57 (24%), Positives = 33/57 (57%)
Query: 360 NNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
+N I+ + ID L++ P+L+++ L NP+ + + I+ +L ++KI++ +
Sbjct: 128 HNKIKSIEEIDKLNTLPELVELGLKGNPIYEGKTNEYMKLLILKKLPQLKIVDNETI 184
Score = 74 (31.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 222 VEILKHSLPALEE---LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKL 278
+E L +S+ LE+ L L N I ++ P+S G N+++L+L NCI +I L
Sbjct: 41 IEKLDNSINTLEKCKRLSLSTNRIEKLIPMS-----GLKNIEILSLGRNCI---KKIQYL 92
Query: 279 CQIR-SLEQLYLNKNNLNRI 297
I +L+QL+L+ N ++++
Sbjct: 93 EDISGTLKQLWLSYNYIDKL 112
>UNIPROTKB|Q8IB59 [details] [associations]
symbol:MAL8P1.46 "Outer arm dynein light chain 2, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0003774 "motor
activity" evidence=ISS] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0003774 HOGENOM:HOG000230603 KO:K10411 EMBL:AL844507
HSSP:Q9XHH2 RefSeq:XP_001349300.1 ProteinModelPortal:Q8IB59
EnsemblProtists:MAL8P1.46:mRNA GeneID:2655387 KEGG:pfa:MAL8P1.46
EuPathDB:PlasmoDB:PF3D7_0822500 OMA:FQYPPIE ProtClustDB:CLSZ2432051
Uniprot:Q8IB59
Length = 199
Score = 78 (32.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 14/57 (24%), Positives = 33/57 (57%)
Query: 360 NNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
+N I+ + ID L++ P+L+++ L NP+ + + I+ +L ++KI++ +
Sbjct: 128 HNKIKSIEEIDKLNTLPELVELGLKGNPIYEGKTNEYMKLLILKKLPQLKIVDNETI 184
Score = 74 (31.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 26/80 (32%), Positives = 46/80 (57%)
Query: 222 VEILKHSLPALEE---LHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKL 278
+E L +S+ LE+ L L N I ++ P+S G N+++L+L NCI +I L
Sbjct: 41 IEKLDNSINTLEKCKRLSLSTNRIEKLIPMS-----GLKNIEILSLGRNCI---KKIQYL 92
Query: 279 CQIR-SLEQLYLNKNNLNRI 297
I +L+QL+L+ N ++++
Sbjct: 93 EDISGTLKQLWLSYNYIDKL 112
>UNIPROTKB|Q05443 [details] [associations]
symbol:LUM "Lumican" species:9913 "Bos taurus" [GO:0005578
"proteinaceous extracellular matrix" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005615 "extracellular space"
evidence=IEA] [GO:0005583 "fibrillar collagen" evidence=IEA]
[GO:0005518 "collagen binding" evidence=IEA] [GO:0030199 "collagen
fibril organization" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] InterPro:IPR001611 InterPro:IPR027219 PROSITE:PS51450
GO:GO:0005615 GO:GO:0005578 GO:GO:0045944 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 Pfam:PF01462
SMART:SM00013 GO:GO:0005583 GeneTree:ENSGT00600000084286
HOGENOM:HOG000234447 HOVERGEN:HBG108061 EMBL:L11063 EMBL:BC102271
IPI:IPI00716158 PIR:A46743 RefSeq:NP_776359.1 UniGene:Bt.2452
ProteinModelPortal:Q05443 STRING:Q05443 PRIDE:Q05443
Ensembl:ENSBTAT00000002279 GeneID:280847 KEGG:bta:280847 CTD:4060
InParanoid:Q05443 KO:K08122 OMA:LHINYNN OrthoDB:EOG4CZBGK
NextBio:20804995 PMAP-CutDB:Q05443 PANTHER:PTHR24371:SF1
Uniprot:Q05443
Length = 342
Score = 116 (45.9 bits), Expect = 0.00054, P = 0.00054
Identities = 60/218 (27%), Positives = 100/218 (45%)
Query: 118 LVGKDKIQDK-FSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGA 176
L+ KI+ K FSK ++L + Y ++ ++G + +L +L LT N +S +G+
Sbjct: 105 LLENSKIKGKVFSKLKQLKKLHINYNNLTE---SVGPLPKSLVDLQLTNNKISK---LGS 158
Query: 177 FGEQLPALAVLNLSNNLMSKEVTG--LPQLKSIRILVLNCTGVNWMQVEILKHSLP-ALE 233
F + L L ++L +N + ++ L LKS+ L L+ + Q+ L LP +L
Sbjct: 159 F-DGLVNLTFIHLQHNQLKEDAVSAALKGLKSLEYLDLS-----FNQMTKLPSGLPVSLL 212
Query: 234 ELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
L+L N IS I P + F LQ L L N +A+ + SL +L L+ N
Sbjct: 213 TLYLDNNKISNI-P--DEYFKRFSALQYLRLSHNELADSGVPGNSFNVSSLLELDLSYNK 269
Query: 294 LNRIYYPNNDTIHELVSAHESHEESYLPFQNLCCLLLG 331
L I N + + + +E + F C +LG
Sbjct: 270 LKSIPTVNENLENYYLEVNELEKFDVKSF----CKILG 303
>UNIPROTKB|P35458 [details] [associations]
symbol:DCTN1 "Dynactin subunit 1" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0030286 "dynein complex"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000938 Pfam:PF01302 GO:GO:0005737 GO:GO:0005874
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0030286 GO:GO:0003774 EMBL:X62773
IPI:IPI00600697 PIR:A41642 RefSeq:NP_001026538.1 UniGene:Gga.48036
ProteinModelPortal:P35458 STRING:P35458 PRIDE:P35458 GeneID:426238
KEGG:gga:426238 CTD:1639 eggNOG:KOG0971 HOVERGEN:HBG004956
KO:K04648 OrthoDB:EOG43TZTR NextBio:20827907 InterPro:IPR022157
Pfam:PF12455 Uniprot:P35458
Length = 1224
Score = 123 (48.4 bits), Expect = 0.00054, P = 0.00054
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 3 DCNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
+ + + K+G RV R GTV YVG +G W+GV D GK+DG++ G +YF
Sbjct: 22 EASSKPLKVGSRVEVIGKGHR-GTVAYVGATLXATGKWVGVILDEAKGKNDGTVQGRKYF 80
Query: 63 QAKSQKSGSFVR 74
+ + G FVR
Sbjct: 81 TCE-ENHGIFVR 91
>MGI|MGI:1919100 [details] [associations]
symbol:Clip4 "CAP-GLY domain containing linker protein
family, member 4" species:10090 "Mus musculus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR002110 InterPro:IPR000938 PROSITE:PS50088 SMART:SM00248
MGI:MGI:1919100 Pfam:PF01302 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GeneTree:ENSGT00700000104055 HOGENOM:HOG000007206
HOVERGEN:HBG057079 KO:K10423 EMBL:AK018895 EMBL:AK075758
EMBL:BC011280 EMBL:BC035226 IPI:IPI00284864 IPI:IPI00378257
IPI:IPI00553520 RefSeq:NP_084455.2 RefSeq:NP_780587.1
UniGene:Mm.196382 PDB:1WHJ PDB:1WHK PDBsum:1WHJ PDBsum:1WHK
ProteinModelPortal:Q8CI96 SMR:Q8CI96 STRING:Q8CI96
PhosphoSite:Q8CI96 PRIDE:Q8CI96 Ensembl:ENSMUST00000024854
GeneID:78785 KEGG:mmu:78785 UCSC:uc008dmw.2 UCSC:uc008dmz.1
UCSC:uc012awx.1 CTD:79745 InParanoid:Q8CI96 OMA:FATQLID
OrthoDB:EOG4V6ZGH EvolutionaryTrace:Q8CI96 NextBio:349496
Bgee:Q8CI96 Genevestigator:Q8CI96 GermOnline:ENSMUSG00000024059
Uniprot:Q8CI96
Length = 704
Score = 120 (47.3 bits), Expect = 0.00059, P = 0.00059
Identities = 28/75 (37%), Positives = 42/75 (56%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG+RV +R+GT+K+ G G W G++ + +GK+DGS+ GV+YF S + G
Sbjct: 486 LGERVLVVG--QRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSC-SPRYG 542
Query: 71 SFV---RVHNLSPGI 82
F RV LS +
Sbjct: 543 IFAPPSRVQRLSDSL 557
>UNIPROTKB|F1Q140 [details] [associations]
symbol:PODN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030336 "negative regulation of cell
migration" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005615 "extracellular space" evidence=IEA] [GO:0005518
"collagen binding" evidence=IEA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 InterPro:IPR003591
SMART:SM00369 GO:GO:0030336 InterPro:IPR000372 SMART:SM00013
GeneTree:ENSGT00600000084286 OMA:SGNRLHT EMBL:AAEX03003830
EMBL:AAEX03003831 Ensembl:ENSCAFT00000030455 Uniprot:F1Q140
Length = 594
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 51/174 (29%), Positives = 84/174 (48%)
Query: 131 FEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIG-AFGEQLPALAVLNL 189
FE LT+ YL + + L +D N L+ K G FG++ P L + L
Sbjct: 182 FEHLTNLNYLYLANNKLTLAPRFLPNTLISVDFAANYLT--KIYGLTFGQK-PNLRSVYL 238
Query: 190 SNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
NN ++ GLP ++ IL+L+ N+++ + KH PAL +LHL N + +
Sbjct: 239 HNNKLAD--AGLPDNMFNGSSNVEILILSS---NFLR-HVPKHLPPALYKLHLKNNKLEK 292
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRI 297
I P + +L+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 293 IPPGA---FSELSHLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRV 343
>ZFIN|ZDB-GENE-061103-397 [details] [associations]
symbol:zgc:153913 "zgc:153913" species:7955 "Danio
rerio" [GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR001611
PROSITE:PS51450 ZFIN:ZDB-GENE-061103-397 eggNOG:COG4886
InterPro:IPR000483 InterPro:IPR003591 SMART:SM00369 SMART:SM00082
InterPro:IPR000372 SMART:SM00013 KO:K13023
GeneTree:ENSGT00700000104286 EMBL:CABZ01111922 EMBL:BC125910
IPI:IPI00613175 RefSeq:NP_001073448.1 UniGene:Dr.152360
Ensembl:ENSDART00000092924 GeneID:559700 KEGG:dre:559700
HOGENOM:HOG000205740 InParanoid:A0JMK3 OMA:CKVDKCS
OrthoDB:EOG4P8FJC NextBio:20883092 Uniprot:A0JMK3
Length = 496
Score = 118 (46.6 bits), Expect = 0.00060, P = 0.00060
Identities = 64/238 (26%), Positives = 107/238 (44%)
Query: 73 VRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELV----G-KDKIQDK 127
V +H L G+ PE + + G +D M L + EL+ G D Q
Sbjct: 11 VLIH-LYCGVCCPEPCQC-FSGSKLVCSDDRMKSLPVNISTQVRELIVVASGIPDLDQQS 68
Query: 128 FSKFEELTSAALPYLG--VSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALA 185
F E L + L +L + S + L+EL+++GN+ DI F L L
Sbjct: 69 FP--ETLRLSKLVFLNGMLKSVSGEAFERLVELRELEISGNICWMSLDIQTFSS-LTNLT 125
Query: 186 VLNLSNNLMSKEVTGL-PQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
L L+NN +S GL L + +L L G++++ + + L L+EL L N IS
Sbjct: 126 RLLLNNNKLSGVDAGLFHSLHQLEMLQLRGNGLSFLSGRLFQR-LHRLQELDLSFNQISS 184
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN 302
+ S+ + Q L++L+L+ N I + + + L++L L ++NL R+ P +
Sbjct: 185 L---STELFQNNSELRVLSLQANKIPNLPDGI-FTHLDHLQELNL-RSNLIRVLTPGS 237
>SGD|S000005092 [details] [associations]
symbol:ALF1 "Alpha-tubulin folding protein" species:4932
"Saccharomyces cerevisiae" [GO:0007023 "post-chaperonin tubulin
folding pathway" evidence=IMP;IPI] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006457 "protein folding"
evidence=IMP;IPI] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IPI] [GO:0043014
"alpha-tubulin binding" evidence=IPI] InterPro:IPR000938
SGD:S000005092 Pfam:PF01302 GO:GO:0005634 GO:GO:0005737
EMBL:BK006947 EMBL:Z46843 HOGENOM:HOG000209180 OrthoDB:EOG42593D
GO:GO:0005874 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 EMBL:X92517
GeneTree:ENSGT00700000104055 EMBL:Z71424 GO:GO:0007023 PIR:S55136
RefSeq:NP_014251.1 ProteinModelPortal:P53904 SMR:P53904
DIP:DIP-901N STRING:P53904 PaxDb:P53904 EnsemblFungi:YNL148C
GeneID:855574 KEGG:sce:YNL148C CYGD:YNL148c eggNOG:NOG249270
OMA:RRGWLRY NextBio:979691 Genevestigator:P53904 GermOnline:YNL148C
Uniprot:P53904
Length = 254
Score = 113 (44.8 bits), Expect = 0.00062, P = 0.00062
Identities = 33/90 (36%), Positives = 43/90 (47%)
Query: 14 RVHSANDARRIGTVKYVGEVQ-GYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSF 72
RV A R ++YVG + GTW GV++ GK+DG INGV F + GSF
Sbjct: 164 RVTVDGSAPREAILRYVGPLPLDVMGTWCGVEFPEAAGKNDGRINGVTLFGPVAPGHGSF 223
Query: 73 VRVHNLSPGISLPEALRVRYRGESSKEEED 102
VR P A+ + + E S E ED
Sbjct: 224 VR----------PRAVEILSKDEESAEVED 243
>MGI|MGI:1928401 [details] [associations]
symbol:Clip1 "CAP-GLY domain containing linker protein 1"
species:10090 "Mus musculus" [GO:0001578 "microtubule bundle
formation" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005874
"microtubule" evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IDA] [GO:0005882 "intermediate filament" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=ISO;IDA] [GO:0008270 "zinc ion binding"
evidence=ISO] [GO:0015630 "microtubule cytoskeleton" evidence=ISO]
[GO:0015631 "tubulin binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0031116 "positive regulation of microtubule
polymerization" evidence=ISO] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] [GO:0035371 "microtubule plus end" evidence=IDA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=ISO] InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158
SMART:SM00343 MGI:MGI:1928401 Pfam:PF01302 GO:GO:0005813
GO:GO:0046872 GO:GO:0006810 GO:GO:0008270 GO:GO:0003676
GO:GO:0030659 GO:GO:0001726 GO:GO:0044354 GO:GO:0008017
GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052
SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GO:GO:0035371 GO:GO:0031116 GeneTree:ENSGT00700000104055 CTD:6249
HOGENOM:HOG000092755 HOVERGEN:HBG007123 KO:K10421 OrthoDB:EOG42Z4PQ
EMBL:AK220172 EMBL:BC007191 IPI:IPI00123063 IPI:IPI00761270
RefSeq:NP_062739.2 UniGene:Mm.241109 UniGene:Mm.441802 PDB:2CP7
PDBsum:2CP7 ProteinModelPortal:Q922J3 SMR:Q922J3 IntAct:Q922J3
STRING:Q922J3 PhosphoSite:Q922J3 PaxDb:Q922J3 PRIDE:Q922J3
Ensembl:ENSMUST00000111564 Ensembl:ENSMUST00000111566 GeneID:56430
KEGG:mmu:56430 UCSC:uc008zoa.1 UCSC:uc008zob.1
EvolutionaryTrace:Q922J3 NextBio:312602 Bgee:Q922J3
CleanEx:MM_CLIP1 Genevestigator:Q922J3
GermOnline:ENSMUSG00000049550 Uniprot:Q922J3
Length = 1391
Score = 123 (48.4 bits), Expect = 0.00063, P = 0.00063
Identities = 27/73 (36%), Positives = 43/73 (58%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
Score = 123 (48.4 bits), Expect = 0.00063, P = 0.00063
Identities = 29/76 (38%), Positives = 41/76 (53%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KVGDRVLVGGT--KAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLSPGISLP 85
G F VH ++ I P
Sbjct: 269 GLFAPVHKVTK-IGFP 283
>MGI|MGI:1925507 [details] [associations]
symbol:Lrrc9 "leucine rich repeat containing 9"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 MGI:MGI:1925507 eggNOG:COG4886
InterPro:IPR003603 SMART:SM00446 InterPro:IPR025875 Pfam:PF12799
HSSP:P09661 GeneTree:ENSGT00670000097777 EMBL:AK019545
EMBL:AK029802 EMBL:AK039037 IPI:IPI00895296 IPI:IPI00970024
RefSeq:NP_001136200.1 RefSeq:NP_001136201.1 RefSeq:NP_084346.2
UniGene:Mm.266280 ProteinModelPortal:Q8CDN9 SMR:Q8CDN9 PRIDE:Q8CDN9
Ensembl:ENSMUST00000162159 GeneID:78257 KEGG:mmu:78257
UCSC:uc007nvm.2 UCSC:uc007nvn.2 CTD:341883 HOGENOM:HOG000113390
HOVERGEN:HBG108106 InParanoid:Q8CDN9 OMA:RIRAFND OrthoDB:EOG41G33B
NextBio:348565 Bgee:Q8CDN9 Genevestigator:Q8CDN9 Uniprot:Q8CDN9
Length = 1456
Score = 123 (48.4 bits), Expect = 0.00066, P = 0.00066
Identities = 62/251 (24%), Positives = 118/251 (47%)
Query: 187 LNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHS-LPALEELHL-------- 237
+NL NN ++ +GL L ++++L LN + + + + L + + L+
Sbjct: 1112 VNLQNNNLTS-FSGLIYLPNVKVLCLNYNHIESIMPRLKPQTHLSSRQLLYQKVPSSGYG 1170
Query: 238 -MGNSISEITPVSS----PIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKN 292
G S V S PI+Q +L++L+L N I + L+L ++R+L+ L+L N
Sbjct: 1171 QQGTSKLNRDSVGSENLPPIMQ---SLEVLHLGYNGICNLVQ-LQLNRLRNLKFLFLQGN 1226
Query: 293 NLNRIYYPNN-DTIHELVSAHES----HEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVY 347
++++ +N + ELV H ++ ++ +L L L ++ S S V
Sbjct: 1227 EISQVEGLDNLIVLQELVVDHNRIRAFNDTAFSKPSSLLMLHLEENRLRELSKLQSLVKL 1286
Query: 348 FLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGK 407
+F G N I+D+ ++ LD P L ++ + NP+ R + R +I RL
Sbjct: 1287 EKLFL------GYNKIQDITELEKLDVIPSLRELTVYGNPIC---RKMVHRHVLIFRLPN 1337
Query: 408 IKILNGSEVNS 418
+++L+G +NS
Sbjct: 1338 LQMLDGIPINS 1348
>FB|FBgn0052055 [details] [associations]
symbol:CG32055 species:7227 "Drosophila melanogaster"
[GO:0016942 "insulin-like growth factor binding protein complex"
evidence=ISS] [GO:0005520 "insulin-like growth factor binding"
evidence=ISS] InterPro:IPR001611 PROSITE:PS51450 EMBL:AE014296
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369
GeneTree:ENSGT00690000101816 HSSP:Q9BZR6 InterPro:IPR026906
Pfam:PF13306 RefSeq:NP_729599.1 UniGene:Dm.27841
ProteinModelPortal:Q9VT89 SMR:Q9VT89 IntAct:Q9VT89 MINT:MINT-901114
EnsemblMetazoa:FBtr0076304 GeneID:39188 KEGG:dme:Dmel_CG32055
UCSC:CG32055-RA FlyBase:FBgn0052055 InParanoid:Q9VT89 OMA:LHSNWLE
OrthoDB:EOG4XD26B PhylomeDB:Q9VT89 GenomeRNAi:39188 NextBio:812398
ArrayExpress:Q9VT89 Bgee:Q9VT89 Uniprot:Q9VT89
Length = 534
Score = 118 (46.6 bits), Expect = 0.00067, P = 0.00067
Identities = 66/240 (27%), Positives = 108/240 (45%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNN-LMSKEVTGLPQLKSIRILVLNCT 215
NL+ LDLT N +++ GE L L++SNN L + L L + L L+
Sbjct: 171 NLRFLDLTTN----YQENITLGENAN-LRFLSISNNNLRDFQWCHLRVLPKLEELHLHSN 225
Query: 216 GVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEI 275
+ + + I ++LP L L++ N++ EI L+LL+ N + +
Sbjct: 226 WLEHLDMGIF-YALPNLRVLNVSNNNLFEIKRTLFMAPGEIAPLELLDYSSNIVKVLDDS 284
Query: 276 LKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAH-ESHEESYLP---FQNLCCL--- 328
+ C+++ L L L N +NRI+ + L + H + ++ S LP F NL L
Sbjct: 285 V-FCRLKKLRTLNLWLNQINRIHPRAFLGLSSLQTLHLQGNKISILPDDVFANLTALEKL 343
Query: 329 --LLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRLSEN 386
N +KL ++ LI+ L S NN I DL + +L S P + ++RL N
Sbjct: 344 DLSKNNIQKLGLRVFGERILRKLIY---LDLS-NNYIADLHPL-ALSSMPFIKELRLRRN 398
>MGI|MGI:2441805 [details] [associations]
symbol:Lgr6 "leucine-rich repeat-containing G
protein-coupled receptor 6" species:10090 "Mus musculus"
[GO:0003674 "molecular_function" evidence=ND] [GO:0004871 "signal
transducer activity" evidence=IEA] [GO:0004930 "G-protein coupled
receptor activity" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007186 "G-protein coupled receptor signaling pathway"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016500 "protein-hormone
receptor activity" evidence=IEA] Pfam:PF00560 InterPro:IPR001611
InterPro:IPR000276 InterPro:IPR002131 Pfam:PF00001 PRINTS:PR00237
PRINTS:PR00373 PROSITE:PS00237 PROSITE:PS50262 PROSITE:PS51450
MGI:MGI:2441805 GO:GO:0016021 GO:GO:0005886 eggNOG:COG4886
InterPro:IPR003591 SMART:SM00369 InterPro:IPR000372 SMART:SM00013
GO:GO:0016500 HSSP:P21809 GeneTree:ENSGT00650000092962
HOVERGEN:HBG031675 HOGENOM:HOG000231829 CTD:59352 KO:K08399
OrthoDB:EOG4SQWW8 EMBL:AK137380 EMBL:BC026896 EMBL:AY255562
IPI:IPI00321212 RefSeq:NP_001028581.1 UniGene:Mm.279594
ProteinModelPortal:Q3UVD5 SMR:Q3UVD5 IntAct:Q3UVD5
PhosphoSite:Q3UVD5 PRIDE:Q3UVD5 Ensembl:ENSMUST00000044828
GeneID:329252 KEGG:mmu:329252 UCSC:uc007csq.1 InParanoid:Q3UVD5
OMA:AYGKAPS NextBio:398648 Bgee:Q3UVD5 Genevestigator:Q3UVD5
Uniprot:Q3UVD5
Length = 967
Score = 121 (47.7 bits), Expect = 0.00068, P = 0.00068
Identities = 80/290 (27%), Positives = 129/290 (44%)
Query: 134 LTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNL 193
+ SA LG+S A++ + L DL+ N L++ + G F L L L LS N
Sbjct: 47 MLSADCSELGLSVVPADLDPLTAYL---DLSMNNLTELQP-GLF-HHLRFLEELRLSGNH 101
Query: 194 MSKEVTG--LPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSP 251
+S + G L S++IL+L + + E L LP+L+ L L N IS + P S
Sbjct: 102 LS-HIPGQAFSGLHSLKILMLQSNQLRGIPAEAL-WELPSLQSLRLDANLIS-LVPERS- 157
Query: 252 IVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI--YYPNNDTIHELV 309
+G +L+ L L+DN + E + L + +L+ + L N++ I Y N T ++
Sbjct: 158 -FEGLSSLRHLWLDDNALTE-IPVRALNNLPALQAMTLALNHIRHIPDYAFQNLTSLVVL 215
Query: 310 SAHES---H--EESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIE 364
H + H S+ NL L L N +L ++ + H NN I+
Sbjct: 216 HLHNNRIQHVGTHSFEGLHNLETLDL-NYNELQEFP-LAIRTLGRLQELGFH---NNNIK 270
Query: 365 DLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGS 414
+ + S P L I +NP+ GR S F +++L + LNG+
Sbjct: 271 AIPEKAFMGS-PLLQTIHFYDNPIQFVGR---SAFQYLSKLHTLS-LNGA 315
>TIGR_CMR|BA_1346 [details] [associations]
symbol:BA_1346 "internalin, putative" species:198094
"Bacillus anthracis str. Ames" [GO:0005102 "receptor binding"
evidence=ISS] [GO:0030260 "entry into host cell" evidence=ISS]
InterPro:IPR001611 PROSITE:PS51450 Pfam:PF00395 EMBL:AE016879
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
InterPro:IPR014756 SUPFAM:SSF81296 InterPro:IPR025875 Pfam:PF12799
KO:K13730 Gene3D:2.60.40.1220 InterPro:IPR014755 HSSP:P25146
InterPro:IPR001119 PROSITE:PS51272 RefSeq:NP_843808.1
RefSeq:YP_027515.1 ProteinModelPortal:Q81TD6 DNASU:1086745
EnsemblBacteria:EBBACT00000011375 EnsemblBacteria:EBBACT00000019330
GeneID:1086745 GeneID:2853061 KEGG:ban:BA_1346 KEGG:bat:BAS1246
HOGENOM:HOG000086132 ProtClustDB:CLSK916194
BioCyc:BANT260799:GJAJ-1320-MONOMER Uniprot:Q81TD6
Length = 542
Score = 118 (46.6 bits), Expect = 0.00068, P = 0.00068
Identities = 51/182 (28%), Positives = 92/182 (50%)
Query: 102 DEMYVLSASNKHVS-----IELVGKDKIQDKFSKFEELTSAA----LPYLGVSSPG-ANI 151
D + L SN ++ IE+ + ++ E++T+ A L YL +++ N+
Sbjct: 62 DHLDSLDLSNNKITNVAPLIEMKNVKSLYLSGNQIEDVTALAKMEQLDYLNLANNKITNV 121
Query: 152 GTI--VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRI 209
+ + N+ L L GN + D K + + LP L L L+ N + K+++G+ Q+K +
Sbjct: 122 APLSALKNVTYLTLAGNQIEDIKPLYS----LP-LTDLVLTRNKV-KDLSGIEQMKQLEE 175
Query: 210 LVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCI 269
L + G N ++ + L++LHL N + +ITP+SS + NLQ L+LE N I
Sbjct: 176 LWI---GKNEIKDVTPLSKMTQLKQLHLPNNELKDITPLSSLV-----NLQKLDLEANYI 227
Query: 270 AE 271
++
Sbjct: 228 SD 229
>UNIPROTKB|Q9HBL6 [details] [associations]
symbol:LRTM1 "Leucine-rich repeat and transmembrane
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016021 "integral to membrane" evidence=IEA] InterPro:IPR001611
PROSITE:PS51450 GO:GO:0016021 InterPro:IPR000483 InterPro:IPR003591
SMART:SM00369 SMART:SM00082 InterPro:IPR000372 SMART:SM00013
HSSP:Q9BZR6 eggNOG:KOG0619 EMBL:AF225421 EMBL:BC040732
EMBL:BC074741 IPI:IPI00010227 IPI:IPI00478406 RefSeq:NP_065729.1
UniGene:Hs.591668 ProteinModelPortal:Q9HBL6 SMR:Q9HBL6
STRING:Q9HBL6 DMDM:74761612 PRIDE:Q9HBL6 Ensembl:ENST00000273286
Ensembl:ENST00000493075 GeneID:57408 KEGG:hsa:57408 UCSC:uc003dhl.3
CTD:57408 GeneCards:GC03M054928 H-InvDB:HIX0003383 HGNC:HGNC:25023
HPA:HPA013839 neXtProt:NX_Q9HBL6 PharmGKB:PA142671499
HOGENOM:HOG000290674 HOVERGEN:HBG067803 InParanoid:Q9HBL6
OMA:CLMMLAA OrthoDB:EOG42JNS0 PhylomeDB:Q9HBL6 GenomeRNAi:57408
NextBio:63528 Bgee:Q9HBL6 CleanEx:HS_LRTM1 Genevestigator:Q9HBL6
Uniprot:Q9HBL6
Length = 345
Score = 115 (45.5 bits), Expect = 0.00071, P = 0.00071
Identities = 44/121 (36%), Positives = 66/121 (54%)
Query: 176 AFGEQLPALAVLNLSNNLMSKEVTG-LPQLKSIRILVLNCTGVNWMQVEI-LKHSLPALE 233
AF +P L LNLSNN +S G L+ ++ VLN T + + +E L HSLP L
Sbjct: 69 AF-RSVPWLMTLNLSNNSLSNLAPGAFHGLQHLQ--VLNLTQNSLLSLESRLFHSLPQLR 125
Query: 234 ELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNN 293
EL L N+IS + P S + + ++NL +L ++ N + + L L + S+ L L K+N
Sbjct: 126 ELDLSSNNISHL-PTS--LGETWENLTILAVQQNQLQQLDRAL-LESMPSVRLLLL-KDN 180
Query: 294 L 294
L
Sbjct: 181 L 181
>UNIPROTKB|A4D1F6 [details] [associations]
symbol:LRRD1 "Leucine-rich repeat and death
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0007165 "signal transduction" evidence=IEA] Pfam:PF00560
InterPro:IPR000488 InterPro:IPR001611 PROSITE:PS50017
PROSITE:PS51450 GO:GO:0007165 eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 EMBL:CH236949 Gene3D:1.10.533.10 InterPro:IPR011029
EMBL:AC000120 InterPro:IPR025875 Pfam:PF12799 EMBL:BC026112
EMBL:BC144674 EMBL:BC144678 IPI:IPI00887636 IPI:IPI00935774
RefSeq:NP_001155000.1 UniGene:Hs.671729 ProteinModelPortal:A4D1F6
SMR:A4D1F6 PhosphoSite:A4D1F6 PRIDE:A4D1F6 Ensembl:ENST00000343318
Ensembl:ENST00000430130 Ensembl:ENST00000458448 GeneID:401387
KEGG:hsa:401387 UCSC:uc011khp.1 CTD:401387 GeneCards:GC07M091743
HGNC:HGNC:34300 neXtProt:NX_A4D1F6 HOVERGEN:HBG108705
InParanoid:A4D1F6 OMA:CNKFETF OrthoDB:EOG4K6G5V GenomeRNAi:401387
NextBio:106780 ArrayExpress:A4D1F6 Bgee:A4D1F6
Genevestigator:A4D1F6 Uniprot:A4D1F6
Length = 860
Score = 120 (47.3 bits), Expect = 0.00076, P = 0.00076
Identities = 63/246 (25%), Positives = 113/246 (45%)
Query: 86 EALRVRYRGESSKEEEDEMY----VLSASNKHVS-----IELVGKDKIQDKFSKFEELTS 136
E L ++ G SS E ++ +L+ S+ H+S I +G + ++ + E
Sbjct: 191 EILSLQENGLSSLPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFP 250
Query: 137 AALPYLG---VSSPGAN-IGTIVTNLKELDLTGNLLSDWKDIGAFGEQL---PALAVLNL 189
+ L LG + S G N + I L L L ++ + F + L P L L+L
Sbjct: 251 SDLECLGNLEILSLGKNKLRHIPDTLPSLKTLRVLNLEYNQLTTFPKALCFLPKLISLDL 310
Query: 190 SNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVS 249
+ NL+S + +LK++ L+++ + ++ VEI + L ++EL L N + I
Sbjct: 311 TGNLISSLPKEIRELKNLETLLMDHNKLTFLAVEIFQ--LLKIKELQLADNKLEVI---- 364
Query: 250 SPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELV 309
S ++ F L++L L+ N + E + C + LE L L+ N L + P IH+L
Sbjct: 365 SHKIENFRELRILILDKNLLKNIPEKISCCAM--LECLSLSDNKLTEL--PKY--IHKLN 418
Query: 310 SAHESH 315
+ + H
Sbjct: 419 NLRKLH 424
>UNIPROTKB|Q90944 [details] [associations]
symbol:EPYC "Epiphycan" species:9031 "Gallus gallus"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
Pfam:PF00560 InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005578
InterPro:IPR000372 Pfam:PF01462 SMART:SM00013
GeneTree:ENSGT00700000104006 CTD:1833 HOGENOM:HOG000273909
HOVERGEN:HBG006850 KO:K08127 OMA:CDDHELD OrthoDB:EOG4RV2S6
InterPro:IPR027217 PANTHER:PTHR24371:SF4 EMBL:D10485
IPI:IPI00586684 PIR:A41781 RefSeq:NP_001004382.1 UniGene:Gga.3583
ProteinModelPortal:Q90944 Ensembl:ENSGALT00000018390 GeneID:417890
KEGG:gga:417890 eggNOG:NOG314832 InParanoid:Q90944 NextBio:20821126
Uniprot:Q90944
Length = 316
Score = 114 (45.2 bits), Expect = 0.00078, P = 0.00078
Identities = 44/148 (29%), Positives = 78/148 (52%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNC 214
+ NLK +DLT NL+S+ + AF +LP L L L +N + +++ LP ++ + N
Sbjct: 160 LNNLKRIDLTANLISEIHE-DAF-RRLPQLLELVLRDNRI-RQLPELPSTLTLIDISNNR 216
Query: 215 TGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
G ++ E K L L+ L++ N++ + P+ P ++LQ L+L++N I E E
Sbjct: 217 LGRKGIRNEAFK-DLHELQHLYITDNNLDHV-PLPLP-----ESLQALHLQNNNIQEMHE 269
Query: 275 ILKLCQIR-------SLEQLYLNKNNLN 295
C++R +LE + L+ N +N
Sbjct: 270 DT-FCKMRDFSYVRRALEDIRLDGNPIN 296
>UNIPROTKB|Q7Z5L7 [details] [associations]
symbol:PODN "Podocan" species:9606 "Homo sapiens"
[GO:0005578 "proteinaceous extracellular matrix" evidence=IEA]
[GO:0030336 "negative regulation of cell migration" evidence=IDA]
[GO:0005615 "extracellular space" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005518 "collagen binding"
evidence=IDA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IDA] InterPro:IPR001611 PROSITE:PS51450
GO:GO:0005737 GO:GO:0008285 GO:GO:0005615 GO:GO:0005578
eggNOG:COG4886 InterPro:IPR003591 SMART:SM00369 GO:GO:0030336
GO:GO:0005518 InterPro:IPR000372 SMART:SM00013 EMBL:AL445183
HSSP:P07359 EMBL:AY313607 EMBL:AY358294 EMBL:AK296649 EMBL:AK299375
EMBL:AK304599 EMBL:BC028292 EMBL:BC030608 IPI:IPI00419440
IPI:IPI00645660 IPI:IPI00908607 IPI:IPI00941131
RefSeq:NP_001186009.1 RefSeq:NP_001186010.1 RefSeq:NP_001186011.1
RefSeq:NP_714914.2 UniGene:Hs.586141 UniGene:Hs.740631
ProteinModelPortal:Q7Z5L7 SMR:Q7Z5L7 STRING:Q7Z5L7
PhosphoSite:Q7Z5L7 DMDM:118573110 PRIDE:Q7Z5L7 DNASU:127435
Ensembl:ENST00000312553 Ensembl:ENST00000371500
Ensembl:ENST00000395871 GeneID:127435 KEGG:hsa:127435
UCSC:uc001cuv.3 UCSC:uc001cuw.3 UCSC:uc010ons.2 CTD:127435
GeneCards:GC01P053527 H-InvDB:HIX0199924 HGNC:HGNC:23174
HPA:HPA013892 MIM:608661 neXtProt:NX_Q7Z5L7 PharmGKB:PA134980106
HOVERGEN:HBG059195 InParanoid:Q7Z5L7 OMA:SGNRLHT OrthoDB:EOG42V8FX
ChiTaRS:PODN GenomeRNAi:127435 NextBio:82095 Bgee:Q7Z5L7
CleanEx:HS_PODN Genevestigator:Q7Z5L7 GermOnline:ENSG00000174348
Uniprot:Q7Z5L7
Length = 613
Score = 118 (46.6 bits), Expect = 0.00081, P = 0.00081
Identities = 62/217 (28%), Positives = 109/217 (50%)
Query: 131 FEELTSAALPYLGVSSPGANIGT-IVTN-LKELDLTGNLLSDWKDIG-AFGEQLPALAVL 187
FE LT+ L YL +++ + + N L +D N L+ K G FG++ P L +
Sbjct: 142 FEHLTN--LNYLYLANNKLTLAPRFLPNALISVDFAANYLT--KIYGLTFGQK-PNLRSV 196
Query: 188 NLSNNLMSKEVTGLPQ-----LKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
L NN ++ GLP ++ +L+L+ N+++ + KH PAL +LHL N +
Sbjct: 197 YLHNNKLAD--AGLPDNMFNGSSNVEVLILSS---NFLR-HVPKHLPPALYKLHLKNNKL 250
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIA-EWSEILKLCQIRSLEQLYLNKNNLNRIY--Y 299
+I P + +L+ L L++N + E + ++ SLE L L+ NNL+R+
Sbjct: 251 EKIPPGA---FSELSSLRELYLQNNYLTDEGLDNETFWKLSSLEYLDLSSNNLSRVPAGL 307
Query: 300 PNNDTI-HELVSAHESHEESYL-PFQNLCCLLLGNSK 334
P + + H +A S + + L P ++L LLL +++
Sbjct: 308 PRSLVLLHLEKNAIRSVDANVLTPIRSLEYLLLHSNQ 344
>TAIR|locus:2117617 [details] [associations]
symbol:PIRL4 "plant intracellular ras group-related LRR
4" species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009740
"gibberellic acid mediated signaling pathway" evidence=RCA]
[GO:0010162 "seed dormancy process" evidence=RCA] Pfam:PF00560
InterPro:IPR001611 PROSITE:PS51450 GO:GO:0005886 EMBL:CP002687
GenomeReviews:CT486007_GR eggNOG:COG4886 InterPro:IPR003591
SMART:SM00369 InterPro:IPR025875 Pfam:PF12799 EMBL:AL161587
EMBL:AL117188 HSSP:P07359 HOGENOM:HOG000242894
ProtClustDB:CLSN2683891 EMBL:AY072324 EMBL:AY128730 EMBL:AY849574
IPI:IPI00541009 PIR:T41744 RefSeq:NP_195272.1 UniGene:At.22486
ProteinModelPortal:Q9SVW8 SMR:Q9SVW8 IntAct:Q9SVW8 STRING:Q9SVW8
PaxDb:Q9SVW8 PRIDE:Q9SVW8 EnsemblPlants:AT4G35470.1 GeneID:829699
KEGG:ath:AT4G35470 TAIR:At4g35470 InParanoid:Q9SVW8 OMA:ILSVRYN
PhylomeDB:Q9SVW8 Genevestigator:Q9SVW8 Uniprot:Q9SVW8
Length = 549
Score = 117 (46.2 bits), Expect = 0.00089, P = 0.00089
Identities = 79/275 (28%), Positives = 119/275 (43%)
Query: 124 IQDKFSKFEELTSAALPYLGVSSPGANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPA 183
+ D K LTS L + IG + ++L +LDL N + + + GE L
Sbjct: 238 LPDSLGKLSSLTSLDLSENHIVVLPNTIGGL-SSLTKLDLHSNRIGQLPE--SIGELLN- 293
Query: 184 LAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
L LNL +N +S + +L + L L+C + + I SL +L++L + N I
Sbjct: 294 LVYLNLGSNQLSSLPSAFSRLVRLEELDLSCNNLPILPESI--GSLVSLKKLDVETNDIE 351
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
EI P S + G +L L + N + E + +I +LE L + NN+ ++ +
Sbjct: 352 EI-PYS---IGGCSSLIELRADYNKLKALPEAIG--KITTLEILSVRYNNIRQLPTTMSS 405
Query: 304 --TIHEL-VSAHE--SHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHAS 358
++ EL VS +E S ES L L +GN+ S S + L L S
Sbjct: 406 LASLKELDVSFNELESVPESLCFATTLVKLNIGNNFADMVSLPRS--IGNLEMLEELDIS 463
Query: 359 GNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGR 393
NN I L DS KL R ENP+ P R
Sbjct: 464 -NNQIRVLP--DSFKMLTKLRVFRAQENPLHIPPR 495
>RGD|62019 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA;ISO;IDA] [GO:0007026 "negative regulation of
microtubule depolymerization" evidence=NAS] [GO:0008017 "microtubule
binding" evidence=IDA;TAS] [GO:0030425 "dendrite" evidence=TAS]
[GO:0042599 "lamellar body" evidence=TAS] [GO:0051010 "microtubule
plus-end binding" evidence=IDA] InterPro:IPR000938 Pfam:PF01302
RGD:62019 GO:GO:0005875 GO:GO:0030425 eggNOG:COG5244
Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845
PROSITE:PS50245 GO:GO:0005881 GO:GO:0051010 GO:GO:0007026
GO:GO:0042599 HOGENOM:HOG000092755 HOVERGEN:HBG007123 CTD:7461
KO:K10422 OrthoDB:EOG4X3H0M EMBL:AJ000485 IPI:IPI00195929 PIR:T42734
RefSeq:NP_068837.1 UniGene:Rn.10893 ProteinModelPortal:O55156
SMR:O55156 IntAct:O55156 STRING:O55156 PhosphoSite:O55156
PRIDE:O55156 GeneID:29264 KEGG:rno:29264 UCSC:RGD:62019
InParanoid:O55156 NextBio:608596 ArrayExpress:O55156
Genevestigator:O55156 Uniprot:O55156
Length = 1046
Score = 123 (48.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K G
Sbjct: 222 LGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFG 278
Query: 71 SFVRVHNL 78
F +H +
Sbjct: 279 LFAPIHKV 286
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 86 EALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDK 127
E L V YRG++ E + + A K + E++ + + Q +
Sbjct: 736 EGLDVEYRGQAQAIEFLKEQISLAEKKMLDYEMLQRAEAQSR 777
>MGI|MGI:1313136 [details] [associations]
symbol:Clip2 "CAP-GLY domain containing linker protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=ISO] [GO:0005881 "cytoplasmic microtubule"
evidence=ISO;IDA] [GO:0008017 "microtubule binding" evidence=ISO]
[GO:0051010 "microtubule plus-end binding" evidence=ISO]
InterPro:IPR000938 MGI:MGI:1313136 Pfam:PF01302 GO:GO:0005875
eggNOG:COG5244 Gene3D:2.30.30.190 SMART:SM01052 SUPFAM:SSF74924
PROSITE:PS00845 PROSITE:PS50245 GO:GO:0005881
GeneTree:ENSGT00700000104055 HOGENOM:HOG000092755
HOVERGEN:HBG007123 CTD:7461 KO:K10422 OMA:HWRAQLE EMBL:AJ228863
EMBL:AJ228865 EMBL:AJ228868 EMBL:AJ228869 EMBL:AJ228870
EMBL:AJ228872 EMBL:AJ228876 EMBL:AJ228880 EMBL:AJ228867
EMBL:AJ228875 EMBL:AJ228871 EMBL:AJ228873 EMBL:AJ228877
EMBL:AJ228866 EMBL:AJ228879 EMBL:AJ228878 EMBL:AJ228874
EMBL:AF289667 EMBL:AF289664 EMBL:BC039162 EMBL:BC053048
IPI:IPI00408543 IPI:IPI00467854 PIR:T42720 RefSeq:NP_001034251.1
RefSeq:NP_034120.2 UniGene:Mm.255138 ProteinModelPortal:Q9Z0H8
SMR:Q9Z0H8 IntAct:Q9Z0H8 STRING:Q9Z0H8 PhosphoSite:Q9Z0H8
PaxDb:Q9Z0H8 PRIDE:Q9Z0H8 Ensembl:ENSMUST00000036999
Ensembl:ENSMUST00000100647 GeneID:269713 KEGG:mmu:269713
UCSC:uc008zwi.1 UCSC:uc008zwj.1 InParanoid:Q9Z0H8 OrthoDB:EOG4X3H0M
NextBio:393005 Bgee:Q9Z0H8 CleanEx:MM_CLIP2 Genevestigator:Q9Z0H8
GermOnline:ENSMUSG00000063146 Uniprot:Q9Z0H8
Length = 1047
Score = 123 (48.4 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 28/68 (41%), Positives = 36/68 (52%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG RV + G V+YVGE G W GV+ D GK+DG++ G RYFQ K G
Sbjct: 222 LGDRVLVGGT--KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFG 278
Query: 71 SFVRVHNL 78
F +H +
Sbjct: 279 LFAPIHKV 286
Score = 43 (20.2 bits), Expect = 0.00098, Sum P(2) = 0.00098
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 86 EALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDK 127
E L V YRG++ E + + A K + E++ + + Q +
Sbjct: 737 EGLDVEYRGQAQAIEFLKEQISLAEKKMLDYEMLQRAEAQSR 778
>ZFIN|ZDB-GENE-071126-1 [details] [associations]
symbol:lrrn1 "leucine rich repeat neuronal 1"
species:7955 "Danio rerio" [GO:0016020 "membrane" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] Pfam:PF00560
InterPro:IPR001611 InterPro:IPR003961 InterPro:IPR007110
PROSITE:PS50835 PROSITE:PS50853 PROSITE:PS51450 SMART:SM00060
ZFIN:ZDB-GENE-071126-1 Gene3D:2.60.40.10 InterPro:IPR013783
SUPFAM:SSF49265 InterPro:IPR003598 SMART:SM00408 InterPro:IPR000483
InterPro:IPR003591 SMART:SM00369 SMART:SM00082 InterPro:IPR013098
Pfam:PF07679 InterPro:IPR000372 SMART:SM00013 CTD:57633
GeneTree:ENSGT00690000102097 HOGENOM:HOG000252914
HOVERGEN:HBG052361 OMA:GINNMGE EMBL:CU468905 EMBL:BC155656
IPI:IPI00806642 RefSeq:NP_001124166.1 UniGene:Dr.29133
IntAct:A9JRH0 Ensembl:ENSDART00000084389 GeneID:568527
KEGG:dre:568527 NextBio:20889219 Uniprot:A9JRH0
Length = 717
Score = 118 (46.6 bits), Expect = 0.0010, P = 0.0010
Identities = 48/166 (28%), Positives = 82/166 (49%)
Query: 155 VTNLKELDLTGNLLSDWKDIGAFG-EQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLN 213
+TNL+ L L G L+D G + L +L+ + N L+ T L +L +++ L LN
Sbjct: 215 LTNLRSLVLAGMELTDIPGNAFVGLDNLESLSFYD--NKLVRVPQTALQKLPNLKFLDLN 272
Query: 214 CTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNL-QLLNLEDNCIAEW 272
++ +Q K+ L L+EL + N++ E+ + DNL +L LE ++
Sbjct: 273 KNPIHKIQEGDFKNML-RLKELGI--NNMGELVSIDR---FALDNLPELTKLEATNNPKF 326
Query: 273 SEILKLC--QIRSLEQLYLNKNNLNRIYYPNNDTIHEL--VSAHES 314
S + +L + +LE L LN N LN +Y D++ L +S H +
Sbjct: 327 SYVSRLAFRDLPALESLMLNNNALNSLYQATADSLPNLREISIHSN 372
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.134 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 418 418 0.00082 118 3 11 22 0.43 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 112
No. of states in DFA: 614 (65 KB)
Total size of DFA: 264 KB (2139 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.34u 0.10s 40.44t Elapsed: 00:00:02
Total cpu time: 40.36u 0.10s 40.46t Elapsed: 00:00:02
Start: Mon May 20 18:16:05 2013 End: Mon May 20 18:16:07 2013
WARNINGS ISSUED: 1