BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014792
(418 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RBD9|TBCE_PONAB Tubulin-specific chaperone E OS=Pongo abelii GN=TBCE PE=2 SV=1
Length = 527
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 117/414 (28%), Positives = 197/414 (47%), Gaps = 58/414 (14%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQKS 69
+GQRV + TV++ G V +G WLGV+WD GKHDGS G YFQ +
Sbjct: 10 IGQRVEVNGEH---ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFQCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPGANIGTI--VTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G G N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEGCPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
N+S N + +TG L ++++LVLN TG+ W +V P LEEL+L N+I
Sbjct: 185 NVSENKLKFPSGSVLTG--TLSALKVLVLNQTGITWAEVLRCAMGCPGLEELYLESNNIF 242
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ +++P+
Sbjct: 243 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDIGISSLHFPD-- 296
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMI 363
+ C +S + Y ++ +N I
Sbjct: 297 -------------------AGIGC----------KTSLFPSLKYLVV--------NDNQI 319
Query: 364 EDLASIDSLDSFPKLMDIRLSENPVSDPGR-GGISRFAIIARLGKIKILNGSEV 416
+ + LD P L + NP++ + +R IIA +G++K LN E+
Sbjct: 320 SQWSFFNELDKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEI 373
>sp|Q5FVQ9|TBCE_RAT Tubulin-specific chaperone E OS=Rattus norvegicus GN=Tbce PE=2 SV=1
Length = 524
Score = 145 bits (367), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 116/412 (28%), Positives = 190/412 (46%), Gaps = 57/412 (13%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQKS 69
+G+RV + TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSFVR + ++ G AL+ RY +++++ L +K V + +G + I K S
Sbjct: 67 GSFVRPNIVNFGEDFLTALKKRYVLTDGPDDDEKSCSLKVGSKQV--QTIGFEHITKKQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ L +L VS G I N++ +DL+ NLLS W ++ EQL L L
Sbjct: 125 QLRSLQDISLWKCAVSCAGERGRIAEACPNIRVVDLSKNLLSTWDEVILIAEQLKDLEAL 184
Query: 188 NLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
+LS N + S T +++ LVLN TG+ W +V S P L+EL+L N IS
Sbjct: 185 DLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLQELYLKSNGIS- 243
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDT 304
+S V NL+LL+L N + S++ + + LE L L+ L+ I++P+ +
Sbjct: 244 ---ISERPVNALQNLRLLDLSSNPSIDESQLCLIAYLPRLEHLLLSDIGLSSIHFPDAE- 299
Query: 305 IHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIE 364
+ C +S + Y ++ +N I
Sbjct: 300 --------------------IGC----------KTSMFPALTYLIV--------NDNQIS 321
Query: 365 DLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
+ + I+ LD L + + NP++ +G + IIA++G++K LN ++
Sbjct: 322 EWSFINELDKLQSLQALSCARNPLT---KGDKAEEIIIAKIGQLKTLNRCQI 370
>sp|Q15813|TBCE_HUMAN Tubulin-specific chaperone E OS=Homo sapiens GN=TBCE PE=1 SV=1
Length = 527
Score = 144 bits (364), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 196/414 (47%), Gaps = 58/414 (14%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQKS 69
+G+RV + TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVEVNGEH---ATVRFAGVVPPVAGPWLGVEWDNPERGKHDGSHEGTVYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R + ++ G A++ RY E EE+ + +++ NK V E +G D I + S
Sbjct: 67 GSFIRPNKVNFGTDFLTAIKNRYVLEDGPEEDRKEQIVTIGNKPV--ETIGFDSIMKQQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L VS G + N++++DL+ NLLS W ++ +QL L VL
Sbjct: 125 QLSKLQEVSLRNCAVSCAGEKGGVAEACPNIRKVDLSKNLLSSWDEVIHIADQLRHLEVL 184
Query: 188 NLSNNLMS----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSIS 243
N+S N + +TG L +++LVLN TG+ W +V P LEEL+L N+I
Sbjct: 185 NVSENKLKFPSGSVLTG--TLSVLKVLVLNQTGITWAEVLRCVAGCPGLEELYLESNNIF 242
Query: 244 EITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNND 303
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ +++P+
Sbjct: 243 -ISERPTDVLQ---TVKLLDLSSNQLIDENQLYLIAHLPRLEQLILSDTGISSLHFPD-- 296
Query: 304 TIHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMI 363
+ C +S + Y ++ +N I
Sbjct: 297 -------------------AGIGC----------KTSMFPSLKYLVV--------NDNQI 319
Query: 364 EDLASIDSLDSFPKLMDIRLSENPVSDPGR-GGISRFAIIARLGKIKILNGSEV 416
+ + L+ P L + NP++ + +R IIA +G++K LN E+
Sbjct: 320 SQWSFFNELEKLPSLRALSCLRNPLTKEDKEAETARLLIIASIGQLKTLNKCEI 373
>sp|Q5U508|TBCE_XENLA Tubulin-specific chaperone E OS=Xenopus laevis GN=tbce PE=2 SV=1
Length = 522
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/419 (28%), Positives = 192/419 (45%), Gaps = 64/419 (15%)
Query: 11 LGQRVHSANDARRI------GTVKYVGEVQGYSGTWLGVDWD-YGNGKHDGSINGVRYFQ 63
+ V S + RRI TV+YVG V G WLGV+WD + GKH+G+ G +YF
Sbjct: 1 MNANVPSDANCRRIICDGEYATVRYVGNVPPTPGLWLGVEWDNHLRGKHNGTHEGTKYFT 60
Query: 64 AKSQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDK 123
GSF+R+ + G+ ALR RY K E++E V+ ++ELVG +
Sbjct: 61 CSHPTGGSFIRLKKANFGVDFLAALRKRY---GLKSEQNEELVIGKK----TVELVGFES 113
Query: 124 IQDKFSKFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQL 181
IQ++ SK +L +L VS+ G I N+ DL+ NL S W+ + QL
Sbjct: 114 IQEEQSKLNKLKDVSLRECAVSNAGEKGQICHSCPNIMTADLSKNLFSSWESLAHISSQL 173
Query: 182 PALAVLNLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLM 238
L L+LS N + S + ++++L LN TG+ W ++ PALEELHL+
Sbjct: 174 ENLTSLDLSENKLNPSSNPSSLATSFCNLKVLSLNRTGMKWNEILQCASMWPALEELHLV 233
Query: 239 GNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIY 298
N IS + P V NL +L++ +N I + +++ + + L+Q+ ++ N ++ I
Sbjct: 234 SNDISLL---EQP-VNNLQNLTILDISNNKIVDGNQLHTIAFLPRLKQVIVSNNIISSIS 289
Query: 299 YPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHAS 358
+P+ D H T+ +S SL +
Sbjct: 290 FPDVDFGH-------------------------------TAMFISLT--------SLAVN 310
Query: 359 GNNMIEDLASIDSLDSFPKLMDIRLSENPVSDPGRGGIS-RFAIIARLGKIKILNGSEV 416
GNN I + I+ L L + NP+ D + + R IIA++ +K LN +E+
Sbjct: 311 GNN-ISEWCVINELHKLLHLESLNCHGNPLMDLDKNPETVRQLIIAKIENLKFLNKTEI 368
>sp|Q5U378|TBCE_DANRE Tubulin-specific chaperone E OS=Danio rerio GN=tbce PE=2 SV=2
Length = 521
Score = 138 bits (347), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 121/415 (29%), Positives = 197/415 (47%), Gaps = 60/415 (14%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQKS 69
+G+RV D R GTV+YVG V +G WLGV+WD+ GKHDGS +GVRYF +
Sbjct: 7 VGRRV--CCDGER-GTVRYVGPVPPTAGVWLGVEWDHPERGKHDGSHDGVRYFTCRHPTG 63
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSFVR S G+ AL+ RY E + +EM + S ++ +VG + ++ K S
Sbjct: 64 GSFVRPQKASFGVDYVTALKQRYEVEIEEVTAEEMKISSK-----TVVMVGFENVKKKQS 118
Query: 130 KFEELTSAALPYLGVSSPGA--NIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ LT L VS+PG I ++ LDL+GNLLS W+ + A EQL +L L
Sbjct: 119 -VKNLTEVGLRRCEVSAPGPENEIRNTTPFVQSLDLSGNLLSSWEVLAAITEQLDSLQEL 177
Query: 188 NLSNN---LMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
+LS+N + S + +R+L +N + W QV +EEL+L N+I+E
Sbjct: 178 HLSHNRLSISSAPSSLSSAFSHLRVLSINSCALTWTQVLHCAPMWQQVEELYLADNNITE 237
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDT 304
+ ++Q L +L+L +N IA+ +L++ + LE+L L+ +L+ I + +
Sbjct: 238 LLRPEH-VLQA---LTVLDLSNNQIAQ-ETVLEISHLPRLERLNLSSTSLSEIKFSD--- 289
Query: 305 IHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIE 364
+P + L A +N I
Sbjct: 290 -------------------------------VPAGKKTT-----LFPALKELLLDDNNIS 313
Query: 365 DLASIDSLDSFPKLMDIRLSENPVSDPGRG-GISRFAIIARLGKIKILNGSEVNS 418
+ ++ L+ P L+ + NP+ + +R +IARLG++++L+ ++ S
Sbjct: 314 EWRVVNELEKLPSLVYLSCRRNPLLHKEKNLETARQIMIARLGQLELLDMRQILS 368
>sp|Q8CIV8|TBCE_MOUSE Tubulin-specific chaperone E OS=Mus musculus GN=Tbce PE=1 SV=1
Length = 524
Score = 137 bits (345), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/412 (27%), Positives = 187/412 (45%), Gaps = 57/412 (13%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQKS 69
+G+RV + TV++ G V +G WLGV+WD GKHDGS G YF+ +
Sbjct: 10 IGRRVEVNGE---YATVRFCGAVPPVAGLWLGVEWDNPERGKHDGSHEGTMYFKCRHPTG 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSFVR ++ G AL+ RY E ++++ L +K V + +G + I K S
Sbjct: 67 GSFVRPSKVNFGDDFLTALKKRYVLEDGPDDDENSCSLKVGSKQV--QTIGFEHITKKQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ L +L VS G I N++ ++L+ NLLS W ++ EQL L L
Sbjct: 125 QLRALQDISLWNCAVSHAGEQGRIAEACPNIRVVNLSKNLLSTWDEVVLIAEQLKDLEAL 184
Query: 188 NLSNNLM---SKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISE 244
+LS N + S T +++ LVLN TG+ W +V S P LEEL+L N+IS
Sbjct: 185 DLSENKLQFPSDSPTLTRTFSTLKTLVLNKTGITWTEVLHCAPSWPVLEELYLKSNNIS- 243
Query: 245 ITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDT 304
+S V ++LL+L N + S++ + + LE L L+ L+ I++P+ +
Sbjct: 244 ---ISERPVNVLQKMRLLDLSSNPSIDESQLSLIADLPRLEHLVLSDIGLSSIHFPDAE- 299
Query: 305 IHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIE 364
+ C +S + Y ++ +N I
Sbjct: 300 --------------------IGC----------KTSMFPALKYLIV--------NDNQIS 321
Query: 365 DLASIDSLDSFPKLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEV 416
+ + I+ LD L + + NP+S + + IIA++ +++ LN ++
Sbjct: 322 EWSFINELDKLQSLQALSCTRNPLS---KADKAEEIIIAKIAQLRTLNRCQI 370
>sp|Q32KS0|TBCE_BOVIN Tubulin-specific chaperone E OS=Bos taurus GN=TBCE PE=2 SV=1
Length = 528
Score = 136 bits (342), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 113/415 (27%), Positives = 199/415 (47%), Gaps = 59/415 (14%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYG-NGKHDGSINGVRYFQAKSQKS 69
+G+RV + TV++ G V +G WLGV+WD GKHDGS G YF+ + +
Sbjct: 10 IGRRVEVNGEH---ATVRFSGLVPPVAGLWLGVEWDNPERGKHDGSHEGTVYFKCRHPTA 66
Query: 70 GSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIELVGKDKIQDKFS 129
GSF+R H ++ G+ A++ RY E +EE+ ++ NK V E +G D + + S
Sbjct: 67 GSFIRPHKVNFGVDFLTAIKNRYVLEDEPKEEETEQIVIIGNKPV--ETIGFDSVIKQQS 124
Query: 130 KFEELTSAALPYLGVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVL 187
+ +L +L V+ G I N++ +DL+ NLLS W+++ +QL L VL
Sbjct: 125 QLSKLQDVSLRNCAVNGAGDKGEIAKACPNIRSIDLSKNLLSSWEEVIDIADQLKHLEVL 184
Query: 188 NLSNNLMS-----KEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSI 242
NLS N ++ TG ++++LVLN TGV W +V P LE+L+L N+I
Sbjct: 185 NLSENKLTSPSSSPSPTG--TFPTLKVLVLNRTGVTWAEVLRCASGWPVLEKLYLESNNI 242
Query: 243 SEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRIYYPNN 302
I+ + ++Q ++LL+L N + + +++ + + LEQL L+ ++ I++P+
Sbjct: 243 I-ISERPTDVLQ---TVKLLDLSSNQLIDENQLFLIAYLPRLEQLILSDIGISSIHFPD- 297
Query: 303 DTIHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNM 362
+ C +S + Y ++ +N
Sbjct: 298 --------------------AGIGC----------KTSMFPSLQYLVL--------NDNQ 319
Query: 363 IEDLASIDSLDSFPKLMDIRLSENPVSDPGRGG-ISRFAIIARLGKIKILNGSEV 416
I + ++ LD L + + NP+++ + +R IIAR+G+++ LN +
Sbjct: 320 IAQWSFMNELDKLQSLHALSCTRNPLTEGSKDAQTTRQFIIARIGQLRTLNKCAI 374
>sp|Q55CN0|TBCE_DICDI Tubulin-specific chaperone E OS=Dictyostelium discoideum GN=tbce
PE=3 SV=1
Length = 525
Score = 106 bits (264), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 109/427 (25%), Positives = 185/427 (43%), Gaps = 80/427 (18%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDY-GNGKHDGSINGVRYFQAK 65
E + +G+RV D +GT++Y G+V G+ G W G++WD GKH G++ G +YF+
Sbjct: 11 EYFYIGERVKG--DDGSVGTIRYQGKVDGFEGNWYGIEWDDPKRGKHQGTVKGKQYFKCI 68
Query: 66 SQKSGSFVRVHNLSPGISLPEALRVRYRGESSKEEEDEMYVLSASNK-HVSIELVGKDKI 124
++ SGSF++ L G + +++ ++ + + D++YV S + I+++G ++
Sbjct: 69 NKGSGSFMKYEKLIKGETFMKSISDKFHQKI--DNYDDLYVDSTKEDIKIQIQMIGMNQT 126
Query: 125 QDKFSKFEELTSAALPYLGVSSPGAN--IGTIVTNLKELDLTGNLLSDWKDIGAFGEQLP 182
++ KF T + YL +S + I NL EL+L+ LL+ W I +QLP
Sbjct: 127 RENQKKFIAQTLLSASYLPISEIDESPLIYNNFKNLIELNLSNCLLNSWTQIVKLLKQLP 186
Query: 183 ALAVLNLSNNLMS-------KEV-------TGLPQLKSIRILVLNCTGVNWMQV-EILKH 227
L L+L NN +S KEV + ++++N NW V I K+
Sbjct: 187 NLNRLHLCNNRLSFNIDEFKKEVNSNNEYGNSIDDCNVKDLILVNSNLSNWSIVSSICKY 246
Query: 228 SLPALEELHLMGNSISEITPVSS--------------PIVQG---------FDNLQLLNL 264
+E + L NSI I S IV+ F L+ L+L
Sbjct: 247 LFKNIESICLSSNSIENINLFKSILNNDNENENENENEIVEQQQQQQPQYLFPTLKSLDL 306
Query: 265 EDNCIAEWSEIL-KLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQ 323
+N I +++IL L + L +L LN N + I + ++ ++S+ F+
Sbjct: 307 ANNNIKSFNDILSSLGNLPQLTELNLNNNQITDIEFN-----GDVDDGNKSNNGKTNQFK 361
Query: 324 NLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFPKLMDIRL 383
NL + L N+K I D +D LD L ++
Sbjct: 362 NLKRIYLSNNK----------------------------INDWKYLDKLDELQSLDELSF 393
Query: 384 SENPVSD 390
NP+ D
Sbjct: 394 RNNPIVD 400
>sp|Q5PQJ7|TBCEL_RAT Tubulin-specific chaperone cofactor E-like protein OS=Rattus
norvegicus GN=Tbcel PE=2 SV=1
Length = 424
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 126/281 (44%), Gaps = 52/281 (18%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEV-- 198
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N +S V
Sbjct: 59 GITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSNPLSLSVLE 118
Query: 199 -TGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
T +R LVLN + +W V + LP LEEL L N + VS P V
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHTILQELPDLEELFLCLN---DYETVSCPSV-CCH 174
Query: 258 NLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHE 316
+L+LL++ DN + EW+EI KL SL+ L L N++N I P D++ L
Sbjct: 175 SLKLLHITDNNLQEWTEIRKLGVMFPSLDTLVLANNHVNAIEEP-ADSLARL-------- 225
Query: 317 ESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFP 376
F NL + SLH SG ED ID L+SFP
Sbjct: 226 -----FPNL-------------------------RSISLHKSGLQSWED---IDKLNSFP 252
Query: 377 KLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVN 417
KL ++RL P+ P R ++ARL + LNGS V
Sbjct: 253 KLEEVRLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVVT 293
>sp|Q5QJ74|TBCEL_HUMAN Tubulin-specific chaperone cofactor E-like protein OS=Homo sapiens
GN=TBCEL PE=2 SV=2
Length = 424
Score = 100 bits (248), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 127/281 (45%), Gaps = 52/281 (18%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSN---NLMSKE 197
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+ NL E
Sbjct: 59 GITCAGDEKEIAAFCAHVSELDLSDNKLEDWHEVSKIVSNVPQLEFLNLSSNPLNLSVLE 118
Query: 198 VTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
T +R LVLN + +W V ++ LP LEEL L N + VS P +
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHMILQELPDLEELFLCLN---DYETVSCPSI-CCH 174
Query: 258 NLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHE 316
+L+LL++ DN + +W+EI KL SL+ L L N+LN I P +D++ L
Sbjct: 175 SLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEP-DDSLARL-------- 225
Query: 317 ESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFP 376
F NL + SLH SG ED ID L+SFP
Sbjct: 226 -----FPNL-------------------------RSISLHKSGLQSWED---IDKLNSFP 252
Query: 377 KLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVN 417
KL ++RL P+ P R +IARL + LNGS V
Sbjct: 253 KLEEVRLLGIPLLQPYTTEERRKLVIARLPSVSKLNGSVVT 293
>sp|Q8C5W3|TBCEL_MOUSE Tubulin-specific chaperone cofactor E-like protein OS=Mus musculus
GN=Tbcel PE=1 SV=1
Length = 424
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 126/281 (44%), Gaps = 52/281 (18%)
Query: 143 GVSSPG--ANIGTIVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEV-- 198
G++ G I ++ ELDL+ N L DW ++ +P L LNLS+N +S V
Sbjct: 59 GITCAGDEREIAAFCAHVSELDLSDNKLQDWHEVSKIVSNVPQLEFLNLSSNPLSLSVLE 118
Query: 199 -TGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFD 257
T +R LVLN + +W V + LP LEEL L N + VS P V
Sbjct: 119 RTCAGSFSGVRKLVLNNSKASWETVHTILQELPELEELFLCLN---DYETVSCPSV-CCH 174
Query: 258 NLQLLNLEDNCIAEWSEILKL-CQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHE 316
+L+LL++ DN + +W+EI KL SL+ L L N+LN I P D++ L
Sbjct: 175 SLKLLHITDNNLQDWTEIRKLGVMFPSLDTLVLANNHLNAIEEP-ADSLARL-------- 225
Query: 317 ESYLPFQNLCCLLLGNSKKLPTSSHVSFVVYFLIFAFSLHASGNNMIEDLASIDSLDSFP 376
F NL + SLH SG ED ID L+SFP
Sbjct: 226 -----FPNL-------------------------RSISLHKSGLQSWED---IDKLNSFP 252
Query: 377 KLMDIRLSENPVSDPGRGGISRFAIIARLGKIKILNGSEVN 417
KL ++RL P+ P R ++ARL + LNGS V
Sbjct: 253 KLEEVRLLGIPLLQPYTTEERRKLVVARLPSVSKLNGSVVT 293
>sp|P39937|PAC2_YEAST Protein PAC2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=PAC2 PE=1 SV=1
Length = 518
Score = 81.3 bits (199), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/435 (25%), Positives = 193/435 (44%), Gaps = 98/435 (22%)
Query: 8 SYKLGQRVHSANDARRIG----TVKYVGEVQGY-SGTWLGVDWD-YGNGKHDGSINGVRY 61
+Y++G R+ +IG T+K++G ++ + S GV+WD + GKH G+I+ + Y
Sbjct: 2 TYEIGDRL-------KIGGYFCTIKFIGVIKPWPSVKAYGVEWDDHSRGKHSGTIDDIHY 54
Query: 62 FQAKSQKSGSFVRVHNL-SPG---ISLPEALRVRYRGESSKEEEDEMYVLSASNKHVSIE 117
F + SGSF++ + SPG I+ EAL +Y G S+ + LS NK V E
Sbjct: 55 FDVQIPNSGSFLKESKIKSPGVRRITFYEALSEKYGGSSNNIND-----LSIGNKRV--E 107
Query: 118 LVGKDKIQDKFSKFEELTSAALPYLGVSSPGANIGTI------VTNLKELDLTGNLLSDW 171
+G D++ + +++L AL V+ N + N+K+LDL+ NL ++
Sbjct: 108 GLGFDELNARNKNYKKLRKIALRDSDVAILFQNQDELNRVIQNCVNVKDLDLSLNLFTNI 167
Query: 172 KDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKS-----IRILVLNCTGVNWMQVEILK 226
+ F E L L LN+S N K ++G LK I+ L L+ G+++ + L
Sbjct: 168 NSLCEFIEPLKNLESLNISQN---KLLSGWDNLKEYDLSHIKTLRLSSCGLSYKHIGKLL 224
Query: 227 HSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQ 286
S L+ L L N++ +S +Q F+N E C +LE+
Sbjct: 225 KSFRTLKMLDLSYNNL------TSAGIQNFEN------EIPC--------------TLEE 258
Query: 287 LYLNKNNLNRI-YYPNNDTIHELVSAHESHEESYLPFQNLCCLLLGNSKKLPTSSHVSFV 345
L ++ NNL +P N T+ L ++ + +S
Sbjct: 259 LNISGNNLISFPLFPKNLTLKGLNVSN---------------------------NQISRA 291
Query: 346 VYFLIFAFSLHASGNNMIEDLASIDSLD-SFPKLMDIRLSENPVSDPG-----RGGISRF 399
I++ +N ++ + ID L+ +FP L +I LS N + G + +
Sbjct: 292 PSIAIYSVESLDITDNKFKERSLIDDLNKTFPSLKNIHLSGNEFNYNGNYINVEEQATFY 351
Query: 400 AIIARLGKIKILNGS 414
++AR ++ +LNGS
Sbjct: 352 EVLARFDRVMVLNGS 366
>sp|Q5U243|CLIP3_XENLA CAP-Gly domain-containing linker protein 3 OS=Xenopus laevis
GN=clip3 PE=2 SV=1
Length = 534
Score = 59.3 bits (142), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
KLG R+ DA + GT+++ G + SG W+GV+ D +GK+DGS+ G+RYF K
Sbjct: 285 KLGDRI--LLDAEKAGTLRFCGTTEFASGQWVGVELDEPDGKNDGSVGGIRYFICPP-KQ 341
Query: 70 GSFVRVHNLSPG--------ISLPEALRV---RYRGESSKEEE 101
G F V +S S P RV R G+ KE++
Sbjct: 342 GIFAPVSKISKAPDQPPSSVTSTPRTPRVDFSRVTGKGRKEKK 384
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 21 ARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFV 73
++ G V++ G+ G W G++ + GKHDGS+ GVRYF S K+G F
Sbjct: 413 GQKQGIVRFYGKTDFAPGYWFGIELEKPTGKHDGSVFGVRYFTC-SAKNGVFA 464
>sp|Q8C0R9|LRRD1_MOUSE Leucine-rich repeat and death domain-containing protein 1 OS=Mus
musculus GN=Lrrd1 PE=2 SV=2
Length = 853
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 85/166 (51%), Gaps = 18/166 (10%)
Query: 139 LPYLGVSSPGANIGTIV-------TNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSN 191
L YL S G N+ T + NL+ L+L N L+ + F LP L LNL+
Sbjct: 250 LRYLETLSLGKNMLTYIPDSLSSLKNLRILNLEYNQLTIFSKSLCF---LPKLNSLNLTG 306
Query: 192 NLMSKEVTGLPQLKSIRILVLNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSP 251
N++ + +LK++ L+++ + ++ VEI + LP ++ELHL N + I SP
Sbjct: 307 NMIGSLPKEVRELKNLESLLMDHNKLTFLAVEIFQ--LPKIKELHLADNKLEAI----SP 360
Query: 252 IVQGFDNLQLLNLEDNCIAEWSEILKLCQIRSLEQLYLNKNNLNRI 297
++ F L+LLNL+ N + + K+ +LE L L+ NN+ +
Sbjct: 361 KIENFKELRLLNLDKNLLQSIPK--KISHCVNLESLSLSDNNIEEL 404
>sp|Q5R686|CLIP3_PONAB CAP-Gly domain-containing linker protein 3 OS=Pongo abelii GN=CLIP3
PE=2 SV=1
Length = 547
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLPEA 87
G F V +S + P +
Sbjct: 352 GLFASVSKISKAVDAPPS 369
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 22 RRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
++ G V++ G+ G W G++ D GKHDGS+ GVRYF
Sbjct: 427 QKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYF 467
>sp|Q96DZ5|CLIP3_HUMAN CAP-Gly domain-containing linker protein 3 OS=Homo sapiens GN=CLIP3
PE=1 SV=3
Length = 547
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLPEA 87
G F V +S + P +
Sbjct: 352 GLFASVSKISKAVDAPPS 369
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 22 RRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYF 62
++ G V++ G+ G W G++ D GKHDGS+ GVRYF
Sbjct: 427 QKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYF 467
>sp|B9EHT4|CLIP3_MOUSE CAP-Gly domain-containing linker protein 3 OS=Mus musculus GN=Clip3
PE=1 SV=1
Length = 547
Score = 57.4 bits (137), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG RV D ++ GT+++ G + SG W+GV+ D GK+DGS+ GVRYF K
Sbjct: 295 RLGDRV--LLDGQKTGTLRFCGTTEFASGQWVGVELDEPEGKNDGSVGGVRYFICPP-KQ 351
Query: 70 GSFVRVHNLSPGISLPEA 87
G F V +S + P +
Sbjct: 352 GLFASVSKVSKAVDAPPS 369
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 22 RRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFV 73
++ G V++ G+ G W G++ D GKHDGS+ GVRYF + + G F
Sbjct: 427 QKQGIVRFYGKTDFAPGYWYGIELDQPTGKHDGSVFGVRYFTC-APRHGVFA 477
>sp|Q54Z01|TBCB_DICDI Tubulin-specific chaperone B OS=Dictyostelium discoideum GN=tbcb
PE=3 SV=1
Length = 270
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 10 KLGQRVHSANDA-----RRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQA 64
K+G R +D R+G V+YVG V+ SG W+GV+ D GK+DGS+ G +YFQ
Sbjct: 188 KVGDRCKVISDDPTNYDERLGKVQYVGTVEFSSGVWIGVELDLPLGKNDGSVKGKQYFQC 247
Query: 65 KSQKSGSFVRVHNL 78
S K G F + N+
Sbjct: 248 -SPKYGCFAKPKNV 260
>sp|Q9VJE5|CL190_DROME Restin homolog OS=Drosophila melanogaster GN=CLIP-190 PE=1 SV=1
Length = 1690
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 23 RIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLS 79
R G ++Y+GE Q G W GV+ D +GK+DG+++ +RYF+ K K G FV + +S
Sbjct: 252 RPGILRYLGETQFAPGNWCGVELDEPSGKNDGTVDDIRYFECKP-KYGVFVPIAKVS 307
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 4 CNPESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQ 63
N E + +GQRV R G + ++G+ +G W GV D NGK+DG ++G RYFQ
Sbjct: 118 ANTEQFIIGQRVWLG--GTRPGQIAFIGDTHFAAGEWAGVVLDEPNGKNDGCVSGKRYFQ 175
Query: 64 AKSQKSGSFVRVHNLS 79
+ K G F R+ L+
Sbjct: 176 CEP-KRGIFSRLTRLT 190
>sp|Q01397|DYNA_NEUCR Dynactin, 150 kDa isoform OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=ro-3 PE=3 SV=3
Length = 1367
Score = 55.8 bits (133), Expect = 5e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
+GQ++ A+ + R V+YVGE GTW+G++ D +GK+DGS+ G RYF + G
Sbjct: 8 VGQKIELADGSGRTAFVRYVGETAFAPGTWVGIELDEPSGKNDGSVQGERYFNCE-MGYG 66
Query: 71 SFVR 74
FVR
Sbjct: 67 MFVR 70
>sp|Q99426|TBCB_HUMAN Tubulin-folding cofactor B OS=Homo sapiens GN=TBCB PE=1 SV=2
Length = 244
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 15 VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVR 74
V +A + R GTV YVG G W+GV +D GK+DGS+NG RYF+ ++ K G+FV+
Sbjct: 167 VRAAGQSPRRGTVMYVGLTDFKPGYWIGVRYDEPLGKNDGSVNGKRYFECQA-KYGAFVK 225
Query: 75 VHNLSPGISLPE 86
++ G PE
Sbjct: 226 PAVVTVG-DFPE 236
>sp|Q9D1E6|TBCB_MOUSE Tubulin-folding cofactor B OS=Mus musculus GN=Tbcb PE=1 SV=2
Length = 244
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 44/72 (61%), Gaps = 2/72 (2%)
Query: 15 VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVR 74
V + + + R GTV YVG G W+GV +D GK+DGS+NG RYF+ ++ K G+FV+
Sbjct: 167 VRAPDHSLRRGTVMYVGLTDFKPGYWVGVRYDEPLGKNDGSVNGKRYFECQA-KYGAFVK 225
Query: 75 VHNLSPGISLPE 86
++ G PE
Sbjct: 226 PSAVTVG-DFPE 236
>sp|P33420|NIP80_YEAST Protein NIP100 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=NIP100 PE=1 SV=2
Length = 868
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGS 71
G VK++GE Q G W G++ D GK+DGS NG+RYF +K+ S
Sbjct: 28 GRVKFIGETQFAKGIWYGIELDKPLGKNDGSANGIRYFDIDLKKANS 74
>sp|Q5E951|TBCB_BOVIN Tubulin-folding cofactor B OS=Bos taurus GN=TBCB PE=2 SV=1
Length = 244
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 15 VHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVR 74
V + R GTV YVG G W+G+ +D GK+DGS+NG RYF+ ++ K G+FV+
Sbjct: 167 VRTPGQPPRRGTVMYVGLTDFKPGYWIGIRYDEPLGKNDGSVNGKRYFECQA-KYGAFVK 225
Query: 75 VHNLSPGISLPE 86
++ G PE
Sbjct: 226 PSVVTVG-DFPE 236
>sp|O42667|SSM4_SCHPO Microtubule-associated protein ssm4 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=ssm4 PE=1 SV=1
Length = 670
Score = 53.9 bits (128), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 24 IGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGIS 83
+G V++ G SG WLGV+ G GK+DGS+ G RYF + K G FVR + S +
Sbjct: 16 LGIVRFAGSTDFESGIWLGVELLNGKGKNDGSVKGKRYFSCEKGK-GIFVRACS-SNVMK 73
Query: 84 LPEALRVRYRG 94
P ++ R +G
Sbjct: 74 RPSVVKSRKKG 84
>sp|Q20728|TBCB_CAEEL Tubulin-specific chaperone B OS=Caenorhabditis elegans GN=F53F4.3
PE=1 SV=1
Length = 229
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 21 ARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSP 80
ARR G V YVG + G W+GV +D GK+DGS+ GVRYF K G FVR ++
Sbjct: 161 ARR-GEVAYVGATKFKEGVWVGVKYDEPVGKNDGSVAGVRYFDC-DPKYGGFVRPVDVKV 218
Query: 81 GISLPE 86
G PE
Sbjct: 219 G-DFPE 223
>sp|Q10235|ALP11_SCHPO Cell polarity protein alp11 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=alp11 PE=1 SV=1
Length = 234
Score = 52.8 bits (125), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 23 RIGTVKYVGEVQGYSGT--WLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSP 80
R GT++Y+G V + W+GV++D GK+DG+++G RYF AK+ K GSF+R +
Sbjct: 164 RYGTIRYIGLVPEINNDNLWVGVEFDEPVGKNDGTVSGKRYFNAKN-KHGSFLRSSEVEV 222
Query: 81 GISLPEAL 88
G PE +
Sbjct: 223 GDFPPEDI 230
>sp|Q9Z0H8|CLIP2_MOUSE CAP-Gly domain-containing linker protein 2 OS=Mus musculus GN=Clip2
PE=1 SV=2
Length = 1047
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 23 RIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNL 78
+ G V+YVGE G W GV+ D GK+DG++ G RYFQ K G F +H +
Sbjct: 232 KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFGLFAPIHKV 286
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLS 79
G V+Y+GE Q G W GV D GK+DG++ GVRYF+ + + G F R L+
Sbjct: 94 GVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQ-GIFTRPSKLT 147
>sp|O55156|CLIP2_RAT CAP-Gly domain-containing linker protein 2 OS=Rattus norvegicus
GN=Clip2 PE=1 SV=1
Length = 1046
Score = 52.4 bits (124), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 23 RIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNL 78
+ G V+YVGE G W GV+ D GK+DG++ G RYFQ K G F +H +
Sbjct: 232 KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFGLFAPIHKV 286
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLS 79
G V+Y+GE Q G W GV D GK+DG++ G+RYF+ + + G F R L+
Sbjct: 94 GVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGLRYFECPALQ-GIFTRPSKLT 147
>sp|P35458|DCTN1_CHICK Dynactin subunit 1 OS=Gallus gallus GN=DCTN1 PE=2 SV=2
Length = 1224
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV R GTV YVG +G W+GV D GK+DG++ G +YF + +
Sbjct: 29 KVGSRVEVIGKGHR-GTVAYVGATLXATGKWVGVILDEAKGKNDGTVQGRKYFTCE-ENH 86
Query: 70 GSFVR 74
G FVR
Sbjct: 87 GIFVR 91
>sp|Q6PCJ1|DCTN1_XENLA Dynactin subunit 1 OS=Xenopus laevis GN=dctn1 PE=2 SV=1
Length = 1232
Score = 52.4 bits (124), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV R GTV YVG +G W+GV D GK+DG++ G RYF + +
Sbjct: 11 KVGSRVEVIGKGYR-GTVAYVGATLFATGKWVGVILDDSKGKNDGTVQGRRYFTCE-ENH 68
Query: 70 GSFVR 74
G FVR
Sbjct: 69 GIFVR 73
>sp|Q9UDT6|CLIP2_HUMAN CAP-Gly domain-containing linker protein 2 OS=Homo sapiens GN=CLIP2
PE=1 SV=1
Length = 1046
Score = 52.0 bits (123), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 23 RIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNL 78
+ G V+YVGE G W GV+ D GK+DG++ G RYFQ K G F +H +
Sbjct: 231 KTGVVRYVGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCPP-KFGLFAPIHKV 285
Score = 48.5 bits (114), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLS 79
G V+Y+GE Q G W GV D GK+DG++ GVRYF+ + + G F R L+
Sbjct: 93 GVVQYLGETQFAPGQWAGVVLDDPVGKNDGAVGGVRYFECPALQ-GIFTRPSKLT 146
>sp|Q9NQT8|KI13B_HUMAN Kinesin-like protein KIF13B OS=Homo sapiens GN=KIF13B PE=1 SV=1
Length = 1826
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 11/80 (13%)
Query: 21 ARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQ-----------AKSQKS 69
A + G V+YVG GTW+GV+ D +GK+DGSI G +YF+ ++ +++
Sbjct: 1711 AHKTGVVRYVGPADFQEGTWVGVELDLPSGKNDGSIGGKQYFRCNPGYGLLVRPSRVRRA 1770
Query: 70 GSFVRVHNLSPGISLPEALR 89
VR + + PEA R
Sbjct: 1771 TGPVRRRSTGLRLGAPEARR 1790
>sp|Q66HD5|CLIP4_RAT CAP-Gly domain-containing linker protein 4 OS=Rattus norvegicus
GN=Clip4 PE=2 SV=1
Length = 599
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 8 SYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQ 67
+ +LG+RV +R+GT+K+ G G W G++ + +GK+DGS+ GV+YF S
Sbjct: 484 ALRLGERVLVV--GQRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSC-SP 540
Query: 68 KSGSFV---RVHNLS 79
+ G F RV LS
Sbjct: 541 RYGIFAPPSRVQRLS 555
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
KLG RV A +++GT+++ G + SG W G++ D GK++GS+ V+YF+ + K
Sbjct: 284 KLGDRVVIA--GQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKC-APKY 340
Query: 70 GSFVRVHNLS 79
G F + ++
Sbjct: 341 GIFAPLSKIT 350
>sp|Q8CI96|CLIP4_MOUSE CAP-Gly domain-containing linker protein 4 OS=Mus musculus GN=Clip4
PE=1 SV=1
Length = 704
Score = 49.3 bits (116), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 6/72 (8%)
Query: 11 LGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSG 70
LG+RV +R+GT+K+ G G W G++ + +GK+DGS+ GV+YF S + G
Sbjct: 486 LGERVLVV--GQRVGTIKFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSC-SPRYG 542
Query: 71 SFV---RVHNLS 79
F RV LS
Sbjct: 543 IFAPPSRVQRLS 554
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
KLG RV A +++GT+++ G + SG W G++ D GK++GS+ V+YF+ + K
Sbjct: 284 KLGDRVVIA--GQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGRVQYFKC-APKY 340
Query: 70 GSFVRVHNLS 79
G F + +S
Sbjct: 341 GIFAPLSKIS 350
Score = 45.8 bits (107), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 37/80 (46%), Gaps = 13/80 (16%)
Query: 24 IGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGIS 83
+ TV+YVG SG WLG++ GK+DG++ RYF K G VR
Sbjct: 636 MATVRYVGPTDFASGIWLGLELRSAKGKNDGAVGDKRYFTCKPNY-GVLVRPS------- 687
Query: 84 LPEALRVRYRGESSKEEEDE 103
RV YRG S + DE
Sbjct: 688 -----RVTYRGISGSKLIDE 702
>sp|O42184|CLIP1_CHICK CAP-Gly domain-containing linker protein 1 OS=Gallus gallus
GN=CLIP1 PE=2 SV=1
Length = 1433
Score = 49.3 bits (116), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 57 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 114
Query: 67 QKSGSFVRVHNLS 79
+ G F R LS
Sbjct: 115 LR-GIFTRPSKLS 126
Score = 47.8 bits (112), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + +
Sbjct: 216 KIGDRVLVG--GTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-RY 272
Query: 70 GSFVRVHNLS 79
G F VH ++
Sbjct: 273 GLFAPVHKVT 282
>sp|Q922J3|CLIP1_MOUSE CAP-Gly domain-containing linker protein 1 OS=Mus musculus GN=Clip1
PE=1 SV=1
Length = 1391
Score = 49.3 bits (116), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
Score = 48.5 bits (114), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 212 KVGDRVLVG--GTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 268
Query: 70 GSFVRVHNLS 79
G F VH ++
Sbjct: 269 GLFAPVHKVT 278
>sp|P30622|CLIP1_HUMAN CAP-Gly domain-containing linker protein 1 OS=Homo sapiens GN=CLIP1
PE=1 SV=2
Length = 1438
Score = 49.3 bits (116), Expect = 6e-05, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 7 ESYKLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKS 66
+ +++G+RV + + G ++++GE Q G W G+ D GK+DGS+ GVRYFQ +
Sbjct: 56 DDFRVGERVWV--NGNKPGFIQFLGETQFAPGQWAGIVLDEPIGKNDGSVAGVRYFQCEP 113
Query: 67 QKSGSFVRVHNLS 79
K G F R L+
Sbjct: 114 LK-GIFTRPSKLT 125
Score = 48.9 bits (115), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
K+G RV + G V+++GE G W GV+ D GK+DG++ G RYFQ + K
Sbjct: 213 KIGDRVLVG--GTKAGVVRFLGETDFAKGEWCGVELDEPLGKNDGAVAGTRYFQCQP-KY 269
Query: 70 GSFVRVHNLS 79
G F VH ++
Sbjct: 270 GLFAPVHKVT 279
>sp|Q8N3C7|CLIP4_HUMAN CAP-Gly domain-containing linker protein 4 OS=Homo sapiens GN=CLIP4
PE=1 SV=1
Length = 705
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 3/70 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
KLG RV A +++GT+++ G + SG W G++ D GK++GS+ V+YF+ + K
Sbjct: 284 KLGDRVVIA--GQKVGTLRFCGTTEFASGQWAGIELDEPEGKNNGSVGKVQYFKC-APKY 340
Query: 70 GSFVRVHNLS 79
G F + +S
Sbjct: 341 GIFAPLSKIS 350
Score = 48.1 bits (113), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 38/80 (47%), Gaps = 13/80 (16%)
Query: 24 IGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLSPGIS 83
+GTV+YVG SG WLG++ GK+DGS+ RYF K G VR
Sbjct: 637 MGTVRYVGPTDFASGIWLGLELRSAKGKNDGSVGDKRYFTCKPNH-GVLVRPS------- 688
Query: 84 LPEALRVRYRGESSKEEEDE 103
RV YRG + + DE
Sbjct: 689 -----RVTYRGINGSKLVDE 703
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
+LG+RV +R+GT+++ G G W G++ + +GK+DGS+ GV+YF S +
Sbjct: 486 RLGERVLVV--GQRLGTIRFFGTTNFAPGYWYGIELEKPHGKNDGSVGGVQYFSC-SPRY 542
Query: 70 GSFV 73
G F
Sbjct: 543 GIFA 546
>sp|P11709|BIK1_YEAST Nuclear fusion protein BIK1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=BIK1 PE=1 SV=1
Length = 440
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 25 GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSFVRVHNLS 79
G +KYVG V +G + GVD GK+DGS G +YFQ + +SG F+++ ++
Sbjct: 20 GQLKYVGPVDTKAGMFAGVDLLANIGKNDGSFMGKKYFQTEYPQSGLFIQLQKVA 74
>sp|O08788|DCTN1_MOUSE Dynactin subunit 1 OS=Mus musculus GN=Dctn1 PE=1 SV=3
Length = 1281
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 28 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 85
Query: 70 GSFVR 74
G FVR
Sbjct: 86 GIFVR 90
>sp|Q14203|DCTN1_HUMAN Dynactin subunit 1 OS=Homo sapiens GN=DCTN1 PE=1 SV=3
Length = 1278
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 28 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 85
Query: 70 GSFVR 74
G FVR
Sbjct: 86 GIFVR 90
>sp|P28023|DCTN1_RAT Dynactin subunit 1 OS=Rattus norvegicus GN=Dctn1 PE=2 SV=2
Length = 1280
Score = 47.4 bits (111), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 10 KLGQRVHSANDARRIGTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKS 69
++G RV R GTV YVG +G W+GV D GK+DG++ G +YF +
Sbjct: 28 RVGSRVEVIGKGHR-GTVAYVGATLFATGKWVGVILDEAKGKNDGTVQGRKYFTC-DEGH 85
Query: 70 GSFVR 74
G FVR
Sbjct: 86 GIFVR 90
>sp|P53904|TBCB_YEAST Tubulin-specific chaperone B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ALF1 PE=1 SV=1
Length = 254
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 43/90 (47%), Gaps = 11/90 (12%)
Query: 14 RVHSANDARRIGTVKYVGEVQ-GYSGTWLGVDWDYGNGKHDGSINGVRYFQAKSQKSGSF 72
RV A R ++YVG + GTW GV++ GK+DG INGV F + GSF
Sbjct: 164 RVTVDGSAPREAILRYVGPLPLDVMGTWCGVEFPEAAGKNDGRINGVTLFGPVAPGHGSF 223
Query: 73 VRVHNLSPGISLPEALRVRYRGESSKEEED 102
VR P A+ + + E S E ED
Sbjct: 224 VR----------PRAVEILSKDEESAEVED 243
>sp|Q9D9Q0|LRC69_MOUSE Leucine-rich repeat-containing protein 69 OS=Mus musculus GN=Lrrc69
PE=2 SV=1
Length = 347
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 14/143 (9%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVLNCTG 216
N K L L G ++ + + E+LP L L+L NN +SK P+L+++ L L G
Sbjct: 15 NTKILTLNGKRITK---MPSTLEKLPNLKTLDLQNNSISKVC---PELRTLTQLTLLNLG 68
Query: 217 VNWMQ--VEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAEWSE 274
N +Q E +K+ L +L+ LHL GN I I P + G L +LNL DN + +
Sbjct: 69 NNHLQEVPEEIKY-LTSLKNLHLFGNRICRIAP---GVFNGLHRLIMLNLNDNRLTSLPQ 124
Query: 275 ILKLCQIRSLEQLYLNKNNLNRI 297
++ ++RSL L LN+NNL I
Sbjct: 125 --EIGRLRSLTYLSLNRNNLTVI 145
>sp|P0DJM0|INLA_LISMO Internalin-A OS=Listeria monocytogenes serovar 1/2a (strain ATCC
BAA-679 / EGD-e) GN=inlA PE=1 SV=1
Length = 800
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK--EVTGLPQLKSIRILV 211
I+TNL EL L GN L KDIG L L L+L+NN +S ++GL +L +++
Sbjct: 249 ILTNLDELSLNGNQL---KDIGTLAS-LTNLTDLDLANNQISNLAPLSGLTKLTELKL-- 302
Query: 212 LNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE 271
G N + L AL L L N + +I+P+S+ NL L L N I++
Sbjct: 303 ----GANQISNISPLAGLTALTNLELNENQLEDISPISN-----LKNLTYLTLYFNNISD 353
Query: 272 WSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLC 326
S + L + L++L+ N ++ + N T +SA + P NL
Sbjct: 354 ISPVSSLTK---LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
>sp|Q723K6|INLA_LISMF Internalin-A OS=Listeria monocytogenes serotype 4b (strain F2365)
GN=inlA PE=3 SV=1
Length = 800
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK--EVTGLPQLKSIRILV 211
I+TNL EL L GN L KDIG L L L+L+NN +S ++GL +L +++
Sbjct: 249 ILTNLDELSLNGNQL---KDIGTLAS-LTNLTDLDLANNQISNLAPLSGLTKLTELKL-- 302
Query: 212 LNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE 271
G N + L AL L L N + +I+P+S+ NL L L N I++
Sbjct: 303 ----GANQISNISPLAGLTALTNLELNENQLEDISPISN-----LKNLTYLTLYFNNISD 353
Query: 272 WSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLC 326
S + L + L++L+ N ++ + N T +SA + P NL
Sbjct: 354 ISPVSSLTK---LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
>sp|G2K3G6|INLA_LISM4 Internalin-A OS=Listeria monocytogenes serotype 1/2a (strain
10403S) GN=inlA PE=3 SV=1
Length = 800
Score = 46.6 bits (109), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 81/175 (46%), Gaps = 20/175 (11%)
Query: 154 IVTNLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSK--EVTGLPQLKSIRILV 211
I+TNL EL L GN L KDIG L L L+L+NN +S ++GL +L +++
Sbjct: 249 ILTNLDELSLNGNQL---KDIGTLAS-LTNLTDLDLANNQISNLAPLSGLTKLTELKL-- 302
Query: 212 LNCTGVNWMQVEILKHSLPALEELHLMGNSISEITPVSSPIVQGFDNLQLLNLEDNCIAE 271
G N + L AL L L N + +I+P+S+ NL L L N I++
Sbjct: 303 ----GANQISNISPLAGLTALTNLELNENQLEDISPISN-----LKNLTYLTLYFNNISD 353
Query: 272 WSEILKLCQIRSLEQLYLNKNNLNRIYYPNNDTIHELVSAHESHEESYLPFQNLC 326
S + L + L++L+ N ++ + N T +SA + P NL
Sbjct: 354 ISPVSSLTK---LQRLFFYNNKVSDVSSLANLTNINWLSAGHNQISDLTPLANLT 405
>sp|Q9D5S7|LRGUK_MOUSE Leucine-rich repeat and guanylate kinase domain-containing protein
OS=Mus musculus GN=Lrguk PE=2 SV=1
Length = 820
Score = 46.2 bits (108), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 22/134 (16%)
Query: 157 NLKELDLTGNLLSDWKDIGAFGEQLPALAVLNLSNNLMSKEVTGLPQLKSIRILVL---- 212
NLK++D + NL+S+ D+ A+ L L L NN + +E+TGL S+ L L
Sbjct: 194 NLKKVDFSSNLISEMYDLSAYH----TLTQLILDNNEI-EEITGLENCISLTHLSLAGNK 248
Query: 213 --NCTGVNWMQVEILK------HSLPALEELHLMGNSISEITPVSSPIVQGFDN---LQL 261
G+ + +++L ++ LEEL + N +SS +QG +N L++
Sbjct: 249 ITTIKGLGTLPIKVLSLSNNMIETITGLEELKALQNLDLSHNQISS--LQGLENHDLLEV 306
Query: 262 LNLEDNCIAEWSEI 275
+NLEDN I E SEI
Sbjct: 307 INLEDNKIKELSEI 320
>sp|P34531|YM92_CAEEL Uncharacterized protein M01A8.2 OS=Caenorhabditis elegans
GN=M01A8.2 PE=4 SV=4
Length = 937
Score = 46.2 bits (108), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 8/60 (13%)
Query: 13 QRVHSANDARRI--------GTVKYVGEVQGYSGTWLGVDWDYGNGKHDGSINGVRYFQA 64
Q V +A+D R+ G ++YVG + G G + G++ NGKHDG+ GV YF A
Sbjct: 13 QEVVTAHDIGRLVDVVNVGKGFLRYVGPIHGKDGMFCGIELLEPNGKHDGTFQGVSYFIA 72
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.134 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 161,461,019
Number of Sequences: 539616
Number of extensions: 7031463
Number of successful extensions: 18532
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 66
Number of HSP's successfully gapped in prelim test: 401
Number of HSP's that attempted gapping in prelim test: 17825
Number of HSP's gapped (non-prelim): 936
length of query: 418
length of database: 191,569,459
effective HSP length: 120
effective length of query: 298
effective length of database: 126,815,539
effective search space: 37791030622
effective search space used: 37791030622
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 63 (28.9 bits)