Query 014794
Match_columns 418
No_of_seqs 357 out of 2100
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 17:56:46 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014794.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014794hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l0b_A E3 ubiquitin-protein li 99.6 5.1E-16 1.7E-20 126.9 6.3 78 121-201 12-89 (91)
2 1x4j_A Ring finger protein 38; 99.6 7.5E-16 2.6E-20 120.9 3.4 69 130-202 5-73 (75)
3 1iym_A EL5; ring-H2 finger, ub 99.4 4.9E-14 1.7E-18 103.6 4.6 51 150-200 4-54 (55)
4 2ecl_A Ring-box protein 2; RNF 99.4 6.7E-14 2.3E-18 112.0 4.1 53 149-201 13-76 (81)
5 2ep4_A Ring finger protein 24; 99.4 1.3E-13 4.6E-18 107.4 5.5 53 149-202 13-65 (74)
6 2kiz_A E3 ubiquitin-protein li 99.4 1.6E-13 5.5E-18 105.6 5.5 53 149-202 12-64 (69)
7 2ect_A Ring finger protein 126 99.4 2.4E-13 8.3E-18 107.0 6.0 54 149-203 13-66 (78)
8 3dpl_R Ring-box protein 1; ubi 99.3 3.7E-13 1.3E-17 113.6 4.0 67 133-200 19-100 (106)
9 1v87_A Deltex protein 2; ring- 99.3 1E-12 3.4E-17 110.8 5.1 53 150-203 24-96 (114)
10 2ecm_A Ring finger and CHY zin 99.3 2E-12 6.8E-17 94.8 4.6 50 150-200 4-54 (55)
11 4a0k_B E3 ubiquitin-protein li 99.3 5.4E-13 1.9E-17 114.6 -0.0 69 133-201 30-112 (117)
12 2ea6_A Ring finger protein 4; 99.2 3.7E-12 1.3E-16 97.2 4.3 51 149-200 13-67 (69)
13 3ng2_A RNF4, snurf, ring finge 99.2 2.5E-12 8.6E-17 99.0 3.3 53 149-202 8-64 (71)
14 2xeu_A Ring finger protein 4; 99.2 3.6E-12 1.2E-16 95.8 3.0 53 150-203 2-58 (64)
15 2d8s_A Cellular modulator of i 99.2 9.4E-12 3.2E-16 99.8 4.8 53 149-203 13-72 (80)
16 2ecn_A Ring finger protein 141 99.2 6.5E-12 2.2E-16 96.7 2.4 49 149-202 13-61 (70)
17 1chc_A Equine herpes virus-1 r 99.2 2.1E-11 7.1E-16 93.3 4.8 49 149-200 3-51 (68)
18 2djb_A Polycomb group ring fin 99.2 2.4E-11 8.3E-16 94.4 5.0 51 149-202 13-63 (72)
19 2d8t_A Dactylidin, ring finger 99.1 1.9E-11 6.6E-16 94.7 3.6 49 149-201 13-61 (71)
20 2ct2_A Tripartite motif protei 99.1 6.9E-11 2.3E-15 94.4 6.8 53 149-202 13-69 (88)
21 2ysl_A Tripartite motif-contai 99.1 8.7E-11 3E-15 90.9 4.9 50 149-202 18-70 (73)
22 2csy_A Zinc finger protein 183 99.1 9.5E-11 3.2E-15 92.9 4.6 48 149-200 13-60 (81)
23 2yur_A Retinoblastoma-binding 99.1 1.2E-10 4.2E-15 91.0 4.9 48 150-200 14-63 (74)
24 2ct0_A Non-SMC element 1 homol 99.0 1E-10 3.6E-15 92.5 4.3 50 150-202 14-65 (74)
25 2ecy_A TNF receptor-associated 99.0 1.4E-10 4.8E-15 88.4 4.4 50 149-202 13-63 (66)
26 4ayc_A E3 ubiquitin-protein li 99.0 8E-11 2.7E-15 102.9 3.4 48 150-201 52-99 (138)
27 4ap4_A E3 ubiquitin ligase RNF 99.0 1.5E-10 5.2E-15 98.7 4.1 54 149-203 5-62 (133)
28 2ecw_A Tripartite motif-contai 99.0 4.9E-10 1.7E-14 88.4 6.2 49 150-202 18-72 (85)
29 2ecv_A Tripartite motif-contai 99.0 5.1E-10 1.7E-14 88.4 6.3 48 150-201 18-71 (85)
30 1t1h_A Gspef-atpub14, armadill 99.0 3.8E-10 1.3E-14 88.5 4.3 48 150-201 7-55 (78)
31 3lrq_A E3 ubiquitin-protein li 98.9 2.9E-10 9.8E-15 94.1 3.5 48 150-201 21-70 (100)
32 2egp_A Tripartite motif-contai 98.9 2.3E-10 8E-15 89.6 2.8 49 149-201 10-65 (79)
33 1g25_A CDK-activating kinase a 98.9 5.6E-10 1.9E-14 84.8 4.6 52 150-202 2-56 (65)
34 2ysj_A Tripartite motif-contai 98.9 6.3E-10 2.2E-14 83.9 4.7 43 149-195 18-63 (63)
35 4ap4_A E3 ubiquitin ligase RNF 98.9 3.3E-10 1.1E-14 96.5 2.7 54 148-202 69-126 (133)
36 2y43_A E3 ubiquitin-protein li 98.9 5.8E-10 2E-14 91.6 4.0 49 150-201 21-69 (99)
37 2ckl_A Polycomb group ring fin 98.9 6.9E-10 2.4E-14 92.7 3.8 50 150-202 14-63 (108)
38 2ecj_A Tripartite motif-contai 98.9 8.6E-10 2.9E-14 81.3 3.6 43 149-195 13-58 (58)
39 3fl2_A E3 ubiquitin-protein li 98.9 1.2E-09 4.1E-14 93.4 4.1 48 150-201 51-99 (124)
40 3ztg_A E3 ubiquitin-protein li 98.8 2.1E-09 7.3E-14 86.8 4.8 49 149-200 11-61 (92)
41 1jm7_A BRCA1, breast cancer ty 98.8 1.7E-09 5.8E-14 90.2 4.3 48 150-201 20-70 (112)
42 2ckl_B Ubiquitin ligase protei 98.8 3.1E-09 1.1E-13 95.2 6.0 49 150-201 53-102 (165)
43 1z6u_A NP95-like ring finger p 98.8 3.4E-09 1.2E-13 94.2 4.3 49 150-202 77-126 (150)
44 3hct_A TNF receptor-associated 98.7 4.1E-09 1.4E-13 89.5 3.0 48 150-201 17-65 (118)
45 3l11_A E3 ubiquitin-protein li 98.7 2.1E-09 7.1E-14 90.7 0.6 48 150-201 14-62 (115)
46 1rmd_A RAG1; V(D)J recombinati 98.7 5.9E-09 2E-13 88.0 3.4 48 150-201 22-70 (116)
47 2vje_A E3 ubiquitin-protein li 98.7 5.5E-09 1.9E-13 79.8 2.9 47 150-200 7-56 (64)
48 2y1n_A E3 ubiquitin-protein li 98.7 9E-09 3.1E-13 104.6 4.8 48 150-201 331-379 (389)
49 1bor_A Transcription factor PM 98.7 7E-09 2.4E-13 76.9 2.6 48 149-203 4-51 (56)
50 2kr4_A Ubiquitin conjugation f 98.7 1.2E-08 4.1E-13 82.2 4.0 48 150-201 13-60 (85)
51 2kre_A Ubiquitin conjugation f 98.7 1.3E-08 4.4E-13 84.7 4.0 48 150-201 28-75 (100)
52 1wgm_A Ubiquitin conjugation f 98.6 2E-08 6.7E-13 83.2 4.2 48 150-201 21-69 (98)
53 1e4u_A Transcriptional repress 98.6 3.5E-08 1.2E-12 78.5 5.0 53 149-202 9-63 (78)
54 2vje_B MDM4 protein; proto-onc 98.6 1.5E-08 5.2E-13 77.0 2.7 49 150-200 6-55 (63)
55 3k1l_B Fancl; UBC, ring, RWD, 98.6 1.2E-08 4.1E-13 101.8 2.4 53 149-201 306-373 (381)
56 1jm7_B BARD1, BRCA1-associated 98.6 1.5E-08 5.3E-13 85.8 2.5 45 150-200 21-66 (117)
57 3knv_A TNF receptor-associated 98.6 1.7E-08 5.7E-13 88.9 2.7 50 149-202 29-79 (141)
58 4ic3_A E3 ubiquitin-protein li 98.5 3.1E-08 1.1E-12 77.5 2.5 43 150-200 23-66 (74)
59 2c2l_A CHIP, carboxy terminus 98.4 9E-08 3.1E-12 91.1 4.1 48 150-201 207-255 (281)
60 1vyx_A ORF K3, K3RING; zinc-bi 98.4 1.3E-07 4.5E-12 71.6 3.9 48 149-200 4-58 (60)
61 2yu4_A E3 SUMO-protein ligase 98.4 1E-07 3.4E-12 78.0 2.7 48 150-200 6-62 (94)
62 3hcs_A TNF receptor-associated 98.3 1.6E-07 5.6E-12 84.2 3.0 48 150-201 17-65 (170)
63 2ea5_A Cell growth regulator w 98.3 4.1E-07 1.4E-11 70.2 4.5 45 149-201 13-58 (68)
64 1wim_A KIAA0161 protein; ring 98.3 2.2E-07 7.5E-12 75.6 2.9 48 150-198 4-61 (94)
65 2ecg_A Baculoviral IAP repeat- 98.3 2.5E-07 8.7E-12 72.3 2.8 44 150-201 24-68 (75)
66 2f42_A STIP1 homology and U-bo 98.2 5.1E-07 1.7E-11 82.7 3.5 48 150-201 105-153 (179)
67 2yho_A E3 ubiquitin-protein li 98.2 4.6E-07 1.6E-11 72.0 2.0 44 150-201 17-61 (79)
68 3t6p_A Baculoviral IAP repeat- 98.1 1E-06 3.5E-11 88.4 2.5 43 150-200 294-337 (345)
69 2bay_A PRE-mRNA splicing facto 98.0 1.8E-06 6.2E-11 65.4 2.8 48 152-202 4-51 (61)
70 3htk_C E3 SUMO-protein ligase 97.9 3.7E-06 1.3E-10 81.2 2.5 49 150-201 180-232 (267)
71 3nw0_A Non-structural maintena 97.6 4.1E-05 1.4E-09 73.0 5.4 50 150-202 179-230 (238)
72 3vk6_A E3 ubiquitin-protein li 97.6 3.4E-05 1.2E-09 64.0 3.4 45 153-200 3-48 (101)
73 2lri_C Autoimmune regulator; Z 94.6 0.025 8.5E-07 43.3 3.5 49 149-201 10-62 (66)
74 2ko5_A Ring finger protein Z; 92.5 0.13 4.3E-06 42.1 4.4 47 150-201 27-73 (99)
75 2jun_A Midline-1; B-BOX, TRIM, 89.5 0.17 5.8E-06 40.7 2.5 35 150-185 2-36 (101)
76 3o36_A Transcription intermedi 86.2 0.57 1.9E-05 42.1 4.0 46 150-199 3-52 (184)
77 1we9_A PHD finger family prote 85.5 0.29 1E-05 36.5 1.5 49 149-197 4-57 (64)
78 2l5u_A Chromodomain-helicase-D 83.6 0.53 1.8E-05 35.0 2.1 45 149-197 9-57 (61)
79 3u5n_A E3 ubiquitin-protein li 83.2 0.37 1.3E-05 44.3 1.4 47 149-199 5-55 (207)
80 3lqh_A Histone-lysine N-methyl 82.7 0.57 2E-05 42.6 2.4 47 152-198 3-63 (183)
81 1mm2_A MI2-beta; PHD, zinc fin 81.1 0.63 2.2E-05 34.6 1.7 46 149-198 7-56 (61)
82 2k16_A Transcription initiatio 79.0 0.5 1.7E-05 36.3 0.6 50 150-200 17-70 (75)
83 1wil_A KIAA1045 protein; ring 78.8 1.6 5.5E-05 35.0 3.4 34 150-185 14-47 (89)
84 1fp0_A KAP-1 corepressor; PHD 77.8 1.8 6.3E-05 34.8 3.6 46 149-198 23-72 (88)
85 2ysm_A Myeloid/lymphoid or mix 77.0 0.97 3.3E-05 37.2 1.8 47 149-196 5-55 (111)
86 1baz_A ARC repressor; transcri 76.3 1.1 3.7E-05 32.5 1.7 19 290-308 5-23 (53)
87 2yt5_A Metal-response element- 74.9 0.77 2.6E-05 34.3 0.6 49 150-198 5-61 (66)
88 1wev_A Riken cDNA 1110020M19; 74.7 0.67 2.3E-05 37.1 0.2 51 150-200 15-74 (88)
89 1nla_A Transcriptional repress 74.7 1.4 4.9E-05 33.3 2.0 20 290-309 5-24 (64)
90 1wep_A PHF8; structural genomi 74.7 2.3 7.9E-05 33.0 3.3 49 150-199 11-64 (79)
91 3v43_A Histone acetyltransfera 74.6 1.1 3.6E-05 37.3 1.5 45 153-197 63-111 (112)
92 2lv9_A Histone-lysine N-methyl 73.8 1.3 4.3E-05 36.1 1.7 46 150-197 27-75 (98)
93 2yql_A PHD finger protein 21A; 73.5 0.58 2E-05 34.0 -0.4 44 150-197 8-55 (56)
94 2xb1_A Pygopus homolog 2, B-ce 72.8 0.71 2.4E-05 38.1 -0.1 49 151-199 3-62 (105)
95 1f62_A Transcription factor WS 71.7 1.6 5.4E-05 30.9 1.6 44 153-197 2-49 (51)
96 3qoq_A Alginate and motility r 71.0 1.3 4.3E-05 34.2 1.0 20 290-309 17-36 (69)
97 2ro1_A Transcription intermedi 69.8 1.5 5E-05 39.9 1.3 44 151-198 2-49 (189)
98 1xwh_A Autoimmune regulator; P 69.7 0.96 3.3E-05 34.0 0.1 45 149-197 6-54 (66)
99 2lbm_A Transcriptional regulat 69.3 4.4 0.00015 35.3 4.2 45 149-197 61-116 (142)
100 2kgg_A Histone demethylase jar 69.3 2.2 7.7E-05 30.4 2.0 44 153-196 4-52 (52)
101 2ri7_A Nucleosome-remodeling f 68.2 1.1 3.9E-05 39.6 0.2 47 150-197 7-58 (174)
102 2puy_A PHD finger protein 21A; 67.5 1.1 3.9E-05 32.9 0.1 46 150-199 4-53 (60)
103 2vpb_A Hpygo1, pygopus homolog 63.5 4.3 0.00015 30.5 2.6 47 150-196 7-64 (65)
104 2l43_A N-teminal domain from h 63.5 1.9 6.6E-05 34.4 0.7 50 150-199 24-76 (88)
105 3ql9_A Transcriptional regulat 61.9 7.5 0.00026 33.3 4.1 45 149-197 55-110 (129)
106 3shb_A E3 ubiquitin-protein li 60.4 1.8 6.2E-05 33.8 -0.0 44 153-197 28-76 (77)
107 3m62_A Ubiquitin conjugation f 60.3 5.3 0.00018 44.8 3.7 48 150-201 890-938 (968)
108 2e6r_A Jumonji/ARID domain-con 60.0 1.5 5.1E-05 35.3 -0.6 48 150-198 15-66 (92)
109 1wee_A PHD finger family prote 59.5 1.7 5.8E-05 33.1 -0.3 49 150-199 15-67 (72)
110 1wem_A Death associated transc 58.5 3.2 0.00011 31.8 1.1 47 151-199 16-71 (76)
111 1weu_A Inhibitor of growth fam 57.7 7.8 0.00027 31.2 3.3 45 150-199 35-86 (91)
112 3v43_A Histone acetyltransfera 57.0 12 0.00042 30.7 4.6 47 150-196 4-62 (112)
113 2kwj_A Zinc finger protein DPF 56.2 4.7 0.00016 33.4 1.8 45 152-196 2-59 (114)
114 2cu8_A Cysteine-rich protein 2 55.7 9.3 0.00032 28.5 3.3 41 150-201 8-48 (76)
115 2cs3_A Protein C14ORF4, MY039 54.9 14 0.00049 29.2 4.3 40 149-188 13-52 (93)
116 1wen_A Inhibitor of growth fam 54.3 11 0.00036 28.8 3.4 45 150-199 15-66 (71)
117 3i2d_A E3 SUMO-protein ligase 54.1 3.8 0.00013 41.2 1.1 48 151-202 249-301 (371)
118 1wew_A DNA-binding family prot 53.8 3.8 0.00013 31.7 0.8 48 150-199 15-73 (78)
119 2e6s_A E3 ubiquitin-protein li 53.5 3.7 0.00013 32.0 0.7 44 153-197 28-76 (77)
120 4gne_A Histone-lysine N-methyl 53.1 11 0.00039 31.1 3.7 47 149-201 13-65 (107)
121 2ku3_A Bromodomain-containing 52.5 10 0.00036 28.9 3.1 49 149-197 14-65 (71)
122 1weo_A Cellulose synthase, cat 51.3 59 0.002 26.1 7.4 53 150-202 15-71 (93)
123 2dj7_A Actin-binding LIM prote 50.8 12 0.0004 28.6 3.3 40 150-200 14-53 (80)
124 1wyh_A SLIM 2, skeletal muscle 50.6 13 0.00045 27.2 3.4 41 151-201 5-45 (72)
125 2co8_A NEDD9 interacting prote 50.0 13 0.00046 28.3 3.5 41 150-201 14-54 (82)
126 1x4k_A Skeletal muscle LIM-pro 49.1 15 0.0005 26.9 3.5 41 151-201 5-45 (72)
127 1x61_A Thyroid receptor intera 48.9 18 0.00061 26.5 3.9 41 150-200 4-44 (72)
128 1mnt_A MNT repressor; transcri 48.6 7.8 0.00027 30.1 1.9 18 291-308 3-20 (76)
129 1u9p_A PARC; unknown function; 48.3 7.3 0.00025 33.0 1.8 20 290-309 16-35 (120)
130 3o70_A PHD finger protein 13; 48.3 4.9 0.00017 30.4 0.7 46 150-197 18-66 (68)
131 1z60_A TFIIH basal transcripti 48.2 9 0.00031 28.4 2.1 43 152-195 16-58 (59)
132 1g47_A Pinch protein; LIM doma 47.6 17 0.00058 26.9 3.7 42 150-201 10-51 (77)
133 1x4l_A Skeletal muscle LIM-pro 47.5 19 0.00065 26.4 3.9 41 150-200 4-46 (72)
134 2jwa_A Receptor tyrosine-prote 47.5 38 0.0013 23.7 5.0 24 78-101 14-37 (44)
135 1z2q_A LM5-1; membrane protein 47.0 15 0.00051 28.7 3.4 38 148-185 18-55 (84)
136 2klu_A T-cell surface glycopro 46.7 41 0.0014 25.6 5.5 27 80-106 12-38 (70)
137 3asl_A E3 ubiquitin-protein li 46.6 5.2 0.00018 30.4 0.5 44 153-197 20-68 (70)
138 1x63_A Skeletal muscle LIM-pro 45.5 21 0.00073 26.8 4.0 41 151-201 15-55 (82)
139 1x4u_A Zinc finger, FYVE domai 44.9 16 0.00055 28.5 3.2 35 148-182 11-45 (84)
140 2yw8_A RUN and FYVE domain-con 44.9 16 0.00053 28.4 3.1 36 149-184 17-52 (82)
141 3ask_A E3 ubiquitin-protein li 42.8 6.9 0.00024 36.7 0.9 44 153-197 176-224 (226)
142 1a7i_A QCRP2 (LIM1); LIM domai 42.7 11 0.00036 28.6 1.8 41 150-201 6-46 (81)
143 1joc_A EEA1, early endosomal a 42.0 13 0.00046 31.3 2.5 35 150-184 68-102 (125)
144 2ks1_B Epidermal growth factor 41.7 45 0.0015 23.2 4.7 23 79-101 15-37 (44)
145 3t7l_A Zinc finger FYVE domain 41.5 15 0.0005 29.2 2.5 36 150-185 19-54 (90)
146 2d8y_A Eplin protein; LIM doma 40.9 21 0.00071 27.6 3.3 41 150-201 14-54 (91)
147 3f6q_B LIM and senescent cell 40.5 20 0.00069 25.9 3.0 42 150-201 10-51 (72)
148 2l2t_A Receptor tyrosine-prote 40.3 57 0.002 22.7 5.1 17 85-101 20-36 (44)
149 1iml_A CRIP, cysteine rich int 39.6 17 0.0006 27.0 2.6 38 153-201 2-39 (76)
150 1x68_A FHL5 protein; four-and- 39.2 25 0.00086 26.1 3.5 40 151-200 5-46 (76)
151 1zbd_B Rabphilin-3A; G protein 38.2 18 0.00063 31.0 2.8 35 149-183 53-88 (134)
152 2l3k_A Rhombotin-2, linker, LI 38.0 17 0.00058 29.9 2.5 37 153-199 10-46 (123)
153 1wfk_A Zinc finger, FYVE domai 37.8 22 0.00076 28.1 3.0 36 150-185 8-43 (88)
154 2cor_A Pinch protein; LIM doma 37.8 28 0.00096 26.2 3.6 40 150-201 14-53 (79)
155 3kv5_D JMJC domain-containing 37.4 6.8 0.00023 40.7 -0.1 49 150-199 36-89 (488)
156 2d8x_A Protein pinch; LIM doma 36.7 34 0.0012 24.8 3.8 40 150-201 4-43 (70)
157 1dvp_A HRS, hepatocyte growth 36.7 18 0.0006 33.1 2.6 34 151-184 161-194 (220)
158 1y02_A CARP2, FYVE-ring finger 36.4 5.2 0.00018 33.9 -1.0 49 150-198 18-66 (120)
159 3c6w_A P28ING5, inhibitor of g 36.0 10 0.00035 27.8 0.7 43 150-197 8-57 (59)
160 4fo9_A E3 SUMO-protein ligase 35.8 24 0.00081 35.3 3.5 48 151-202 215-267 (360)
161 1vfy_A Phosphatidylinositol-3- 35.6 25 0.00085 26.6 2.9 32 152-183 12-43 (73)
162 3zyq_A Hepatocyte growth facto 35.6 19 0.00064 33.3 2.6 35 151-185 164-198 (226)
163 3mpx_A FYVE, rhogef and PH dom 35.5 7.9 0.00027 38.6 0.0 38 149-186 373-410 (434)
164 2dar_A PDZ and LIM domain prot 35.2 38 0.0013 26.0 4.0 40 150-201 24-63 (90)
165 2l4z_A DNA endonuclease RBBP8, 35.0 21 0.00072 29.6 2.6 39 151-200 61-99 (123)
166 2ysm_A Myeloid/lymphoid or mix 34.9 6.5 0.00022 32.1 -0.6 44 153-197 56-103 (111)
167 2vnf_A ING 4, P29ING4, inhibit 34.2 11 0.00036 27.7 0.5 43 150-197 9-58 (60)
168 1zfo_A LAsp-1; LIM domain, zin 33.9 14 0.00049 23.4 1.1 28 152-182 4-31 (31)
169 1nyp_A Pinch protein; LIM doma 33.1 23 0.00079 25.4 2.3 39 151-201 5-43 (66)
170 1v6g_A Actin binding LIM prote 31.9 41 0.0014 25.1 3.7 38 152-201 16-53 (81)
171 1x64_A Alpha-actinin-2 associa 31.7 43 0.0015 25.6 3.8 40 150-201 24-63 (89)
172 2gmg_A Hypothetical protein PF 31.4 12 0.00041 31.0 0.4 26 172-202 72-97 (105)
173 1x62_A C-terminal LIM domain p 31.0 31 0.001 25.9 2.8 39 150-200 14-52 (79)
174 2ehe_A Four and A half LIM dom 30.2 40 0.0014 25.2 3.3 41 151-201 15-55 (82)
175 2cur_A Skeletal muscle LIM-pro 29.5 51 0.0017 23.7 3.7 39 150-200 4-42 (69)
176 2rsd_A E3 SUMO-protein ligase 29.2 7.4 0.00025 29.2 -1.1 46 151-197 10-64 (68)
177 2egq_A FHL1 protein; LIM domai 29.0 39 0.0014 24.9 3.0 40 151-200 15-57 (77)
178 2d8z_A Four and A half LIM dom 28.9 45 0.0015 24.0 3.3 39 150-200 4-42 (70)
179 2g6q_A Inhibitor of growth pro 28.5 17 0.00057 26.9 0.8 43 150-197 10-59 (62)
180 2kwj_A Zinc finger protein DPF 27.8 8.7 0.0003 31.7 -1.0 46 153-199 60-109 (114)
181 2cpg_A REPA protein, transcrip 27.5 21 0.00072 23.8 1.1 16 293-308 3-18 (45)
182 3j1r_A Archaeal adhesion filam 27.5 1.1E+02 0.0036 19.0 4.1 21 75-95 2-22 (26)
183 2cup_A Skeletal muscle LIM-pro 27.4 60 0.0021 25.1 4.0 40 151-200 5-44 (101)
184 2khu_A Immunoglobulin G-bindin 26.7 19 0.00065 29.5 0.9 26 290-318 68-93 (108)
185 2knc_A Integrin alpha-IIB; tra 26.5 72 0.0025 23.2 3.9 31 76-106 11-42 (54)
186 3kqi_A GRC5, PHD finger protei 26.5 16 0.00054 27.8 0.3 46 153-198 11-61 (75)
187 1x6a_A LIMK-2, LIM domain kina 26.2 38 0.0013 25.3 2.5 38 151-200 15-52 (81)
188 2jmi_A Protein YNG1, ING1 homo 25.7 20 0.00069 28.7 0.8 43 150-197 25-75 (90)
189 3o7a_A PHD finger protein 13 v 25.7 16 0.00055 25.8 0.2 41 156-197 8-51 (52)
190 1wig_A KIAA1808 protein; LIM d 25.3 52 0.0018 24.3 3.1 38 151-200 5-42 (73)
191 1j2o_A FLIN2, fusion of rhombo 23.5 55 0.0019 26.3 3.2 38 152-200 4-41 (114)
192 2dlo_A Thyroid receptor-intera 22.9 66 0.0023 23.9 3.3 39 150-200 14-52 (81)
193 2pv0_B DNA (cytosine-5)-methyl 22.7 59 0.002 32.7 3.8 44 150-197 92-147 (386)
194 2rgt_A Fusion of LIM/homeobox 22.4 45 0.0015 28.8 2.5 27 153-181 67-93 (169)
195 1m3v_A FLIN4, fusion of the LI 22.2 56 0.0019 26.6 3.0 48 151-200 32-80 (122)
196 1x3h_A Leupaxin; paxillin fami 22.0 78 0.0027 23.4 3.6 39 151-201 15-53 (80)
197 2iyb_E Testin, TESS, TES; LIM 21.9 55 0.0019 23.4 2.6 39 152-200 3-43 (65)
198 1rut_X Flinc4, fusion protein 21.7 48 0.0016 29.2 2.6 38 153-200 71-108 (188)
199 2k1a_A Integrin alpha-IIB; sin 21.0 2.1E+02 0.0071 19.6 5.5 19 76-94 9-27 (42)
200 3a1b_A DNA (cytosine-5)-methyl 20.6 59 0.002 28.7 2.9 43 150-196 78-132 (159)
201 2cuq_A Four and A half LIM dom 20.6 69 0.0024 23.7 3.0 38 151-200 15-52 (80)
202 1b8t_A Protein (CRP1); LIM dom 20.5 65 0.0022 28.4 3.3 41 150-201 114-154 (192)
203 2l8s_A Integrin alpha-1; trans 20.5 2.5E+02 0.0085 20.3 5.9 31 76-106 8-39 (54)
204 3kv4_A PHD finger protein 8; e 20.4 22 0.00075 36.5 0.1 48 153-200 6-58 (447)
205 2xjy_A Rhombotin-2; oncoprotei 20.2 52 0.0018 26.8 2.4 11 153-163 68-78 (131)
No 1
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.61 E-value=5.1e-16 Score=126.86 Aligned_cols=78 Identities=29% Similarity=0.691 Sum_probs=67.9
Q ss_pred ccCCCCCHHHHhhCCceeeecccccccCCCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 121 SRNRGLDPSVIESFPIFVYSAVKDLKIGKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 121 sr~rgl~~~~i~~lP~~~y~~~~~~~~~~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|++++.|+.||.+.+..... ......+|+||++.|..++.++.+| |+|.||..||..|+..+.+||+||+.+.
T Consensus 12 ~~~~~~s~~~i~~lp~~~~~~~~~--~~~~~~~C~IC~~~~~~~~~~~~l~-C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~ 88 (91)
T 2l0b_A 12 VANPPASKESIDALPEILVTEDHG--AVGQEMCCPICCSEYVKGDVATELP-CHHYFHKPCVSIWLQKSGTCPVCRCMFP 88 (91)
T ss_dssp SCCCCCCHHHHHTSCEEECCTTCS--SSSSCSEETTTTEECCTTCEEEEET-TTEEEEHHHHHHHHTTTCBCTTTCCBSS
T ss_pred cCCCCCCHHHHHhCCCeeeccccc--ccCCCCCCcccChhhcCCCcEEecC-CCChHHHHHHHHHHHcCCcCcCcCccCC
Confidence 447899999999999998876443 2246778999999999999999998 9999999999999999999999999886
Q ss_pred C
Q 014794 201 P 201 (418)
Q Consensus 201 ~ 201 (418)
.
T Consensus 89 ~ 89 (91)
T 2l0b_A 89 P 89 (91)
T ss_dssp C
T ss_pred C
Confidence 4
No 2
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.57 E-value=7.5e-16 Score=120.89 Aligned_cols=69 Identities=36% Similarity=0.916 Sum_probs=59.2
Q ss_pred HHhhCCceeeecccccccCCCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 130 VIESFPIFVYSAVKDLKIGKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 130 ~i~~lP~~~y~~~~~~~~~~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
.++.+|.+.|..... ..+..+|+||++.|..++.++.+| |+|.||..||..|+..+.+||+||+++.+.
T Consensus 5 ~i~~lp~~~~~~~~~---~~~~~~C~IC~~~~~~~~~~~~l~-C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~~ 73 (75)
T 1x4j_A 5 SSGQLPSYRFNPNNH---QSEQTLCVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRTCPICRADSGPS 73 (75)
T ss_dssp CCSSCCCEEBCSSSC---SSSCCEETTTTEECCBTCEEEEET-TTEEEETTHHHHHHHHCSSCTTTCCCCCCC
T ss_pred hHhhCCcEEecCccc---cCCCCCCeECCcccCCCCeEEEEC-CCCHhHHHHHHHHHHcCCcCcCcCCcCCCC
Confidence 366889888876433 236779999999999999889998 999999999999999999999999988754
No 3
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.45 E-value=4.9e-14 Score=103.60 Aligned_cols=51 Identities=55% Similarity=1.258 Sum_probs=46.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
+..+|+||++.|..++.+..++.|+|.||..||..|+..+.+||+||+++.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 567899999999998888888779999999999999999999999999874
No 4
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=6.7e-14 Score=112.02 Aligned_cols=53 Identities=25% Similarity=0.773 Sum_probs=44.3
Q ss_pred CCCcccccccccccC-----------CCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 149 KGALECAVCLSEFED-----------DETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~-----------~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
.+++.|+||+++|.+ ++.++.++.|+|.||.+||+.||..+.+||+||+++..
T Consensus 13 ~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~ 76 (81)
T 2ecl_A 13 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVV 76 (81)
T ss_dssp CCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCE
T ss_pred CCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcch
Confidence 456789999999864 34466666799999999999999999999999998764
No 5
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.42 E-value=1.3e-13 Score=107.43 Aligned_cols=53 Identities=34% Similarity=0.828 Sum_probs=48.2
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
....+|+||++.|..++.+.++| |+|.||..||..|+..+.+||+||+.+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~-C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICP-CKHAFHRKCLIKWLEVRKVCPLCNMPVLQL 65 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEET-TTEEEEHHHHHHHHHHCSBCTTTCCBCSSC
T ss_pred CCCCCCcCCCcccCCCCcEEEcC-CCCEecHHHHHHHHHcCCcCCCcCcccccc
Confidence 35779999999999988888898 999999999999999999999999988653
No 6
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.41 E-value=1.6e-13 Score=105.57 Aligned_cols=53 Identities=40% Similarity=1.035 Sum_probs=48.1
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
....+|+||++.|..++.++.+| |+|.||..||..|+..+.+||+||..+...
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~-C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLP-CMHLFHQVCVDQWLITNKKCPICRVDIEAQ 64 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECT-TSCEEEHHHHHHHHHHCSBCTTTCSBSCSC
T ss_pred CCCCCCeeCCccccCCCcEEEeC-CCCHHHHHHHHHHHHcCCCCcCcCccccCc
Confidence 46678999999999888888898 999999999999999999999999988754
No 7
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.40 E-value=2.4e-13 Score=107.02 Aligned_cols=54 Identities=46% Similarity=1.059 Sum_probs=48.6
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPES 203 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~~ 203 (418)
....+|+||++.|...+.++.++ |+|.||..||..|+..+.+||+||+.+....
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~-C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLP-CNHLFHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECT-TSCEEETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred CCCCCCeeCCccccCCCCEEEeC-CCCeecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 35779999999999988888898 9999999999999999999999999987543
No 8
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.34 E-value=3.7e-13 Score=113.58 Aligned_cols=67 Identities=28% Similarity=0.526 Sum_probs=53.5
Q ss_pred hCCceeeecccccccCCCCcccccccccccCCC---------------ceEecCCCCccccchhHHHHHhcCCCCCCccc
Q 014794 133 SFPIFVYSAVKDLKIGKGALECAVCLSEFEDDE---------------TLRLLPKCDHVFHPHCIDVWLASHVTCPVCRA 197 (418)
Q Consensus 133 ~lP~~~y~~~~~~~~~~~~~~CaICl~~f~~~~---------------~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~ 197 (418)
.+....++.+.......+++.|+||++.|...- .++.++ |+|.||..||+.||..+.+||+||+
T Consensus 19 r~~ik~~~~v~~w~~d~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~-C~H~FH~~Ci~~Wl~~~~~CP~Cr~ 97 (106)
T 3dpl_R 19 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGV-CNHAFHFHCISRWLKTRQVCPLDNR 97 (106)
T ss_dssp SEEEEEEEEEEEEEESSCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEET-TSCEEEHHHHHHHHTTCSBCSSSCS
T ss_pred ceeEEEEEEeeEeecCCCCCCCccCChhHhCcCchhhccccccCCccceEeecc-cCcEECHHHHHHHHHcCCcCcCCCC
Confidence 344555666666666667889999999998541 255666 9999999999999999999999999
Q ss_pred ccC
Q 014794 198 NLT 200 (418)
Q Consensus 198 ~l~ 200 (418)
++.
T Consensus 98 ~~~ 100 (106)
T 3dpl_R 98 EWE 100 (106)
T ss_dssp BCC
T ss_pred cce
Confidence 864
No 9
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.32 E-value=1e-12 Score=110.75 Aligned_cols=53 Identities=23% Similarity=0.624 Sum_probs=42.6
Q ss_pred CCcccccccccccCCC---------------ceEecCCCCccccchhHHHHHh-----cCCCCCCcccccCCCC
Q 014794 150 GALECAVCLSEFEDDE---------------TLRLLPKCDHVFHPHCIDVWLA-----SHVTCPVCRANLTPES 203 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~---------------~~r~lp~C~H~FH~~CI~~WL~-----~~~tCP~CR~~l~~~~ 203 (418)
.+.+|+||++.|.... .+++++ |+|+||..||..|+. .+.+||+||+.+....
T Consensus 24 ~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~-C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~~ 96 (114)
T 1v87_A 24 PEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTK-CSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEKT 96 (114)
T ss_dssp CSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESS-SCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSCS
T ss_pred CCCcCccCChhhcCcccccccccccccCcccceecCC-CCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCCC
Confidence 4568999999997643 344676 999999999999994 4678999999886543
No 10
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.29 E-value=2e-12 Score=94.78 Aligned_cols=50 Identities=28% Similarity=0.815 Sum_probs=43.4
Q ss_pred CCcccccccccccCCC-ceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDE-TLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~-~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...+|+||++.+.+++ .+..++ |+|.||..||..|+..+.+||+||+.+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 4 GSSGCPICLEDIHTSRVVAHVLP-CGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp CCCSCTTTCCCCCTTTSCEEECT-TSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCcCcccChhhcCCCcCeEecC-CCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 5678999999997644 566777 9999999999999999999999998764
No 11
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.25 E-value=5.4e-13 Score=114.55 Aligned_cols=69 Identities=28% Similarity=0.496 Sum_probs=12.3
Q ss_pred hCCceeeecccccccCCCCcccccccccccCC-------------C-ceEecCCCCccccchhHHHHHhcCCCCCCcccc
Q 014794 133 SFPIFVYSAVKDLKIGKGALECAVCLSEFEDD-------------E-TLRLLPKCDHVFHPHCIDVWLASHVTCPVCRAN 198 (418)
Q Consensus 133 ~lP~~~y~~~~~~~~~~~~~~CaICl~~f~~~-------------~-~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~ 198 (418)
.+...+++.+.....+..++.|+||+++|.+. + ..++++.|+|.||..||+.||..+.+||+||++
T Consensus 30 r~~ikkw~ava~w~wd~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~ 109 (117)
T 4a0k_B 30 RFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNRE 109 (117)
T ss_dssp SEEEEEEEEEEEEEECCCC-------------------------------------------------------------
T ss_pred ceEEEEEEEEEEEeecCCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCe
Confidence 44455666676666777788999999999752 2 122223499999999999999999999999998
Q ss_pred cCC
Q 014794 199 LTP 201 (418)
Q Consensus 199 l~~ 201 (418)
+..
T Consensus 110 ~~~ 112 (117)
T 4a0k_B 110 WEF 112 (117)
T ss_dssp ---
T ss_pred eee
Confidence 653
No 12
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.24 E-value=3.7e-12 Score=97.20 Aligned_cols=51 Identities=27% Similarity=0.768 Sum_probs=43.8
Q ss_pred CCCcccccccccccCC----CceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 149 KGALECAVCLSEFEDD----ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~----~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
.+..+|+||++.|.+. ..+.+++ |+|.||..||..|+..+.+||+||..+.
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 67 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTE-CGHVFCSQCLRDSLKNANTCPTCRKKIN 67 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECS-SSCEEEHHHHHHHHHHCSSCTTTCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCC-CCChhcHHHHHHHHHcCCCCCCCCCccC
Confidence 3677899999999863 3446676 9999999999999999999999999875
No 13
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.24 E-value=2.5e-12 Score=98.97 Aligned_cols=53 Identities=26% Similarity=0.740 Sum_probs=45.2
Q ss_pred CCCcccccccccccCC----CceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDD----ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~----~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
.+..+|+||++.+.+. +....++ |+|.||..||..|+..+.+||+||..+...
T Consensus 8 ~~~~~C~IC~~~~~~~~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (71)
T 3ng2_A 8 SGTVSCPICMDGYSEIVQNGRLIVSTE-CGHVFCSQCLRDSLKNANTCPTCRKKINHK 64 (71)
T ss_dssp TTCCBCTTTCCBHHHHHTTTCCEEECT-TSCEEEHHHHHHHHHHCSBCTTTCCBCCCC
T ss_pred CCCCCCcccChhhhccccccCCeEeCC-CCChHhHHHHHHHHHcCCCCCCCCCccChh
Confidence 3677899999998763 4456776 999999999999999999999999988754
No 14
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.22 E-value=3.6e-12 Score=95.83 Aligned_cols=53 Identities=25% Similarity=0.691 Sum_probs=44.8
Q ss_pred CCcccccccccccCC----CceEecCCCCccccchhHHHHHhcCCCCCCcccccCCCC
Q 014794 150 GALECAVCLSEFEDD----ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPES 203 (418)
Q Consensus 150 ~~~~CaICl~~f~~~----~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~~ 203 (418)
+..+|+||++.+.+. +.+..++ |+|.||..||..|+..+.+||+||..+....
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 58 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTE-CGHVFCSQCLRDSLKNANTCPTCRKKINHKR 58 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEET-TSCEEEHHHHHHHHHHCSBCTTTCCBCTTTC
T ss_pred CCCCCCccChhhhCccccCCCEEeCC-CCCchhHHHHHHHHHcCCCCCCCCccCCccc
Confidence 457899999999763 3456676 9999999999999999999999999887543
No 15
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=9.4e-12 Score=99.83 Aligned_cols=53 Identities=28% Similarity=0.767 Sum_probs=44.7
Q ss_pred CCCcccccccccccCCCceEecCCCC-----ccccchhHHHHHhcC--CCCCCcccccCCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCD-----HVFHPHCIDVWLASH--VTCPVCRANLTPES 203 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~-----H~FH~~CI~~WL~~~--~tCP~CR~~l~~~~ 203 (418)
.++..|.||+++|.+++.+ ++| |+ |.||.+||+.||..+ .+||+||+.+....
T Consensus 13 ~~~~~C~IC~~~~~~~~~l-~~p-C~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~~ 72 (80)
T 2d8s_A 13 SSQDICRICHCEGDDESPL-ITP-CHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMET 72 (80)
T ss_dssp TTSCCCSSSCCCCCSSSCE-ECS-SSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCCC
T ss_pred CCCCCCeEcCccccCCCee-Eec-cccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecCc
Confidence 3567899999999887776 578 86 999999999999875 48999999986543
No 16
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.17 E-value=6.5e-12 Score=96.74 Aligned_cols=49 Identities=39% Similarity=0.967 Sum_probs=43.1
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
.+..+|+||++.+.+ ..+| |+|.||..||..|+..+.+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 61 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILP-CAHSFCQKCIDKWSDRHRNCPICRLQMTGA 61 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEET-TTEEECHHHHHHSSCCCSSCHHHHHCTTCC
T ss_pred CCCCCCeeCCcCccC----cccC-CCCcccHHHHHHHHHCcCcCCCcCCcccCC
Confidence 357799999999877 5677 999999999999999999999999988743
No 17
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.16 E-value=2.1e-11 Score=93.26 Aligned_cols=49 Identities=33% Similarity=0.786 Sum_probs=42.7
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
+...+|+||++.+.+ ....+| |+|.||..||..|+..+.+||+||..+.
T Consensus 3 ~~~~~C~IC~~~~~~--~~~~~~-C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~ 51 (68)
T 1chc_A 3 TVAERCPICLEDPSN--YSMALP-CLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCCCSSCCSCCCS--CEEETT-TTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCCCeeCCccccC--CcEecC-CCCeeHHHHHHHHHhCcCcCcCCChhhH
Confidence 356789999999875 346777 9999999999999999999999999885
No 18
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.15 E-value=2.4e-11 Score=94.36 Aligned_cols=51 Identities=22% Similarity=0.485 Sum_probs=42.9
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
.+...|+||++.+.+ .+.+++ |+|.||..||..|+..+.+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~--p~~~~~-CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (72)
T 2djb_A 13 TPYILCSICKGYLID--ATTITE-CLHTFCKSCIVRHFYYSNRCPKCNIVVHQT 63 (72)
T ss_dssp CGGGSCTTTSSCCSS--CEECSS-SCCEECHHHHHHHHHHCSSCTTTCCCCCSS
T ss_pred CCCCCCCCCChHHHC--cCEECC-CCCHHHHHHHHHHHHcCCcCCCcCcccCcc
Confidence 356789999999886 233346 999999999999999999999999988654
No 19
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=1.9e-11 Score=94.67 Aligned_cols=49 Identities=31% Similarity=0.584 Sum_probs=42.7
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
.+..+|+||++.+.+ ...++ |+|.||..||..|+..+.+||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~---~~~~~-CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 13 LTVPECAICLQTCVH---PVSLP-CKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SSCCBCSSSSSBCSS---EEEET-TTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCCccCCcccCC---CEEcc-CCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 356789999999866 45667 99999999999999999999999998863
No 20
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=6.9e-11 Score=94.44 Aligned_cols=53 Identities=32% Similarity=0.793 Sum_probs=45.4
Q ss_pred CCCcccccccccccCCCc-eEecCCCCccccchhHHHHHhcC---CCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDET-LRLLPKCDHVFHPHCIDVWLASH---VTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~-~r~lp~C~H~FH~~CI~~WL~~~---~tCP~CR~~l~~~ 202 (418)
.+..+|+||++.|.+.+. .+.++ |+|.||..||..|+..+ .+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 69 (88)
T 2ct2_A 13 REVLECPICMESFTEEQLRPKLLH-CGHTICRQCLEKLLASSINGVRCPFCSKITRIT 69 (88)
T ss_dssp CSCCBCTTTCCBCCTTSSCEEECS-SSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCS
T ss_pred cCCCCCccCCccccccCCCeEECC-CCChhhHHHHHHHHHcCCCCcCCCCCCCcccch
Confidence 356789999999998764 66777 99999999999999976 7899999987653
No 21
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=8.7e-11 Score=90.86 Aligned_cols=50 Identities=22% Similarity=0.633 Sum_probs=41.9
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHh---cCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---SHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~~~tCP~CR~~l~~~ 202 (418)
.+...|+||++.+.+ ...++ |+|.||..||..|+. .+..||+||..+...
T Consensus 18 ~~~~~C~IC~~~~~~---~~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~ 70 (73)
T 2ysl_A 18 QEEVICPICLDILQK---PVTID-CGHNFCLKCITQIGETSCGFFKCPLCKTSVRKN 70 (73)
T ss_dssp CCCCBCTTTCSBCSS---EEECT-TCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCC
T ss_pred ccCCEeccCCcccCC---eEEcC-CCChhhHHHHHHHHHcCCCCCCCCCCCCcCCcc
Confidence 367799999999885 55566 999999999999997 456899999988643
No 22
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.06 E-value=9.5e-11 Score=92.91 Aligned_cols=48 Identities=19% Similarity=0.502 Sum_probs=42.1
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
.....|+||++.|.+ ..+++ |+|.||..||..|+....+||+||..+.
T Consensus 13 ~~~~~C~IC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 13 EIPFRCFICRQAFQN---PVVTK-CRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCSBCSSSCSBCCS---EEECT-TSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCcCCCchhcC---eeEcc-CCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 356789999999876 44677 9999999999999999999999999885
No 23
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.05 E-value=1.2e-10 Score=90.99 Aligned_cols=48 Identities=29% Similarity=0.662 Sum_probs=40.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcC--CCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH--VTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~--~tCP~CR~~l~ 200 (418)
+...|+||++.|.+ .+.++.|+|.||..||..|+..+ .+||+||+.+.
T Consensus 14 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 63 (74)
T 2yur_A 14 DELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 63 (74)
T ss_dssp GGGSCSSSCCCCTT---CEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSC
T ss_pred CCCCCcCCChHHhC---CeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCC
Confidence 56789999999986 34465699999999999999875 68999999654
No 24
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.05 E-value=1e-10 Score=92.53 Aligned_cols=50 Identities=22% Similarity=0.549 Sum_probs=42.6
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcC--CCCCCcccccCCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH--VTCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~--~tCP~CR~~l~~~ 202 (418)
...+|+||++.|..++... .|+|.||..||..||+.+ .+||+||+++...
T Consensus 14 ~i~~C~IC~~~i~~g~~C~---~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~ 65 (74)
T 2ct0_A 14 AVKICNICHSLLIQGQSCE---TCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 65 (74)
T ss_dssp SSCBCSSSCCBCSSSEECS---SSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSC
T ss_pred CCCcCcchhhHcccCCccC---CCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCC
Confidence 5678999999999765443 599999999999999987 7999999987643
No 25
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.03 E-value=1.4e-10 Score=88.41 Aligned_cols=50 Identities=20% Similarity=0.559 Sum_probs=41.4
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHh-cCCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-SHVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-~~~tCP~CR~~l~~~ 202 (418)
.+...|+||++.+.+.. .++ |||.||..||..|+. .+.+||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~p~---~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 63 (66)
T 2ecy_A 13 EDKYKCEKCHLVLCSPK---QTE-CGHRFCESCMAALLSSSSPKCTACQESIVKD 63 (66)
T ss_dssp CCCEECTTTCCEESSCC---CCS-SSCCCCHHHHHHHHTTSSCCCTTTCCCCCTT
T ss_pred CcCCCCCCCChHhcCee---ECC-CCCHHHHHHHHHHHHhCcCCCCCCCcCCChh
Confidence 35678999999988643 356 999999999999995 567899999988653
No 26
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.03 E-value=8e-11 Score=102.92 Aligned_cols=48 Identities=31% Similarity=0.915 Sum_probs=42.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
++..|+||++.|.+ .+.+| |||.||..||..|+..+.+||+||.++..
T Consensus 52 ~~~~C~iC~~~~~~---~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 99 (138)
T 4ayc_A 52 NELQCIICSEYFIE---AVTLN-CAHSFCSYCINEWMKRKIECPICRKDIKS 99 (138)
T ss_dssp HHSBCTTTCSBCSS---EEEET-TSCEEEHHHHHHHTTTCSBCTTTCCBCCC
T ss_pred ccCCCcccCcccCC---ceECC-CCCCccHHHHHHHHHcCCcCCCCCCcCCC
Confidence 34579999999976 56677 99999999999999999999999998853
No 27
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.01 E-value=1.5e-10 Score=98.67 Aligned_cols=54 Identities=26% Similarity=0.725 Sum_probs=45.8
Q ss_pred CCCcccccccccccCC----CceEecCCCCccccchhHHHHHhcCCCCCCcccccCCCC
Q 014794 149 KGALECAVCLSEFEDD----ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPES 203 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~----~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~~ 203 (418)
.+..+|+||++.|.+. +.++.++ |||.||..||..|+..+.+||+||+.+....
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTE-CGHVFCSQCLRDSLKNANTCPTCRKKINHKR 62 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEET-TCCEEEHHHHHHHHTTCSBCTTTCCBCTTTC
T ss_pred CCCCCCcccChhhhCccccccCeEecC-CCChhhHHHHHHHHHhCCCCCCCCCcCcccc
Confidence 3677999999999764 4456776 9999999999999999999999999886544
No 28
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.99 E-value=4.9e-10 Score=88.44 Aligned_cols=49 Identities=29% Similarity=0.665 Sum_probs=42.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc------CCCCCCcccccCCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS------HVTCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~------~~tCP~CR~~l~~~ 202 (418)
+...|+||++.+.+. ..++ |+|.||..||..|+.. ...||+||..+...
T Consensus 18 ~~~~C~IC~~~~~~p---~~~~-CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~ 72 (85)
T 2ecw_A 18 EEVTCPICLELLKEP---VSAD-CNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFG 72 (85)
T ss_dssp TTTSCTTTCSCCSSC---EECT-TSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTT
T ss_pred cCCCCcCCChhhCcc---eeCC-CCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHH
Confidence 567899999998763 3677 9999999999999988 67899999988643
No 29
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.99 E-value=5.1e-10 Score=88.37 Aligned_cols=48 Identities=29% Similarity=0.732 Sum_probs=41.6
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc------CCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS------HVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~------~~tCP~CR~~l~~ 201 (418)
+..+|+||++.+.+ ...++ |+|.||..||..|+.. ...||+||..+..
T Consensus 18 ~~~~C~IC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~ 71 (85)
T 2ecv_A 18 EEVTCPICLELLTQ---PLSLD-CGHSFCQACLTANHKKSMLDKGESSCPVCRISYQP 71 (85)
T ss_dssp CCCCCTTTCSCCSS---CBCCS-SSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCS
T ss_pred CCCCCCCCCcccCC---ceeCC-CCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCH
Confidence 56799999999876 34566 9999999999999987 7899999998874
No 30
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=98.96 E-value=3.8e-10 Score=88.53 Aligned_cols=48 Identities=23% Similarity=0.552 Sum_probs=41.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc-CCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~ 201 (418)
+...|+||++.|.+ ...++ |||.||..||..|+.. +.+||+||..+..
T Consensus 7 ~~~~C~IC~~~~~~---Pv~~~-CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~ 55 (78)
T 1t1h_A 7 EYFRCPISLELMKD---PVIVS-TGQTYERSSIQKWLDAGHKTCPKSQETLLH 55 (78)
T ss_dssp SSSSCTTTSCCCSS---EEEET-TTEEEEHHHHHHHHTTTCCBCTTTCCBCSS
T ss_pred ccCCCCCccccccC---CEEcC-CCCeecHHHHHHHHHHCcCCCCCCcCCCCh
Confidence 57789999999876 45567 9999999999999987 7889999998864
No 31
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=98.95 E-value=2.9e-10 Score=94.14 Aligned_cols=48 Identities=33% Similarity=0.827 Sum_probs=41.4
Q ss_pred CCcccccccccccCCCceEe-cCCCCccccchhHHHHHhcC-CCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRL-LPKCDHVFHPHCIDVWLASH-VTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~-lp~C~H~FH~~CI~~WL~~~-~tCP~CR~~l~~ 201 (418)
+...|+||++.|.+ .+. ++ |||.||..||..|+..+ .+||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~-CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (100)
T 3lrq_A 21 EVFRCFICMEKLRD---ARLCPH-CSKLCCFSCIRRWLTEQRAQCPHCRAPLQL 70 (100)
T ss_dssp HHTBCTTTCSBCSS---EEECTT-TCCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCccCCccccC---ccccCC-CCChhhHHHHHHHHHHCcCCCCCCCCcCCH
Confidence 46789999999976 445 66 99999999999999987 699999998853
No 32
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=98.95 E-value=2.3e-10 Score=89.62 Aligned_cols=49 Identities=27% Similarity=0.633 Sum_probs=41.7
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc-------CCCCCCcccccCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-------HVTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-------~~tCP~CR~~l~~ 201 (418)
.+..+|+||++.|.+. +.++ |||.||..||..|+.. ...||+||..+..
T Consensus 10 ~~~~~C~IC~~~~~~p---~~l~-CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~ 65 (79)
T 2egp_A 10 QEEVTCPICLELLTEP---LSLD-CGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSF 65 (79)
T ss_dssp CCCCEETTTTEECSSC---CCCS-SSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCS
T ss_pred ccCCCCcCCCcccCCe---eECC-CCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCH
Confidence 3678999999998763 3467 9999999999999987 6689999998865
No 33
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.94 E-value=5.6e-10 Score=84.77 Aligned_cols=52 Identities=19% Similarity=0.549 Sum_probs=41.5
Q ss_pred CCcccccccc-cccCCCce-EecCCCCccccchhHHHHHhc-CCCCCCcccccCCC
Q 014794 150 GALECAVCLS-EFEDDETL-RLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~-~f~~~~~~-r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~~ 202 (418)
++..|+||++ .+...... .+++ |||.||..||..|+.. ...||+||..+...
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 56 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNV-CGHTLCESCVDLLFVRGAGNCPECGTPLRKS 56 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECT-TCCCEEHHHHHHHHHTTSSSCTTTCCCCSSC
T ss_pred CCCcCCcCCCCccCCCccCeecCC-CCCHhHHHHHHHHHHcCCCcCCCCCCccccc
Confidence 4568999999 77765543 4466 9999999999999765 46799999988654
No 34
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.94 E-value=6.3e-10 Score=83.86 Aligned_cols=43 Identities=26% Similarity=0.688 Sum_probs=36.6
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHh---cCCCCCCc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---SHVTCPVC 195 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~~~tCP~C 195 (418)
.+...|+||++.+.+ .++++ |+|.||..||..|+. .+.+||+|
T Consensus 18 ~~~~~C~IC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 18 QEEVICPICLDILQK---PVTID-CGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCCBCTTTCSBCSS---CEECT-TSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred ccCCCCCcCCchhCC---eEEeC-CCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 367799999999886 44566 999999999999998 45689998
No 35
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.92 E-value=3.3e-10 Score=96.54 Aligned_cols=54 Identities=28% Similarity=0.767 Sum_probs=45.1
Q ss_pred CCCCcccccccccccCC----CceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 148 GKGALECAVCLSEFEDD----ETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 148 ~~~~~~CaICl~~f~~~----~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
..+...|+||++.|.+. .....++ |+|.||..||+.|+..+.+||+||.++...
T Consensus 69 ~~~~~~C~iC~~~~~~~~~~~~~~~~~~-CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 126 (133)
T 4ap4_A 69 GSGTVSCPICMDGYSEIVQNGRLIVSTE-CGHVFCSQCLRDSLKNANTCPTCRKKINHK 126 (133)
T ss_dssp SSSSCBCTTTCCBHHHHHHTTCCEEEET-TSBEEEHHHHHHHHHHCSBCTTTCCBCCGG
T ss_pred CCCCCCCCCCCCccccccccCcceEeCC-CCChhhHHHHHHHHHcCCCCCCCCCcCChh
Confidence 34678899999998763 3345666 999999999999999999999999988654
No 36
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=98.91 E-value=5.8e-10 Score=91.61 Aligned_cols=49 Identities=29% Similarity=0.796 Sum_probs=41.4
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+...|+||++.|.+ ...++.|||.||..||..|+..+.+||+||..+..
T Consensus 21 ~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 69 (99)
T 2y43_A 21 DLLRCGICFEYFNI---AMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTE 69 (99)
T ss_dssp HHTBCTTTCSBCSS---EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred CCCCcccCChhhCC---cCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCCh
Confidence 45689999999886 34442399999999999999999999999998764
No 37
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=98.89 E-value=6.9e-10 Score=92.68 Aligned_cols=50 Identities=28% Similarity=0.665 Sum_probs=42.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
+...|+||++.|.+ .+.+++ |||.||..||..|+..+.+||+||..+...
T Consensus 14 ~~~~C~IC~~~~~~--p~~~~~-CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYFID--ATTIIE-CLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBCSS--EEEETT-TCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHHhC--cCEeCC-CCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 56789999999876 233346 999999999999999999999999988643
No 38
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.88 E-value=8.6e-10 Score=81.31 Aligned_cols=43 Identities=33% Similarity=0.896 Sum_probs=36.0
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHh---cCCCCCCc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---SHVTCPVC 195 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~~~tCP~C 195 (418)
.+...|+||++.+.+. +.++ |+|.||..||..|+. .+.+||+|
T Consensus 13 ~~~~~C~IC~~~~~~p---~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 13 QVEASCSVCLEYLKEP---VIIE-CGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCCBCSSSCCBCSSC---CCCS-SCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred ccCCCCccCCcccCcc---EeCC-CCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 3567999999999874 4466 999999999999954 56789998
No 39
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=98.86 E-value=1.2e-09 Score=93.44 Aligned_cols=48 Identities=25% Similarity=0.575 Sum_probs=40.9
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCC-CCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHV-TCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~-tCP~CR~~l~~ 201 (418)
+...|+||++.|.+ .+.++ |||.||..||..|+..+. +||+||..+..
T Consensus 51 ~~~~C~IC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 99 (124)
T 3fl2_A 51 ETFQCICCQELVFR---PITTV-CQHNVCKDCLDRSFRAQVFSCPACRYDLGR 99 (124)
T ss_dssp HHTBCTTTSSBCSS---EEECT-TSCEEEHHHHHHHHHTTCCBCTTTCCBCCT
T ss_pred cCCCCCcCChHHcC---cEEee-CCCcccHHHHHHHHhHCcCCCCCCCccCCC
Confidence 45689999999986 45667 999999999999998654 89999998864
No 40
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=98.84 E-value=2.1e-09 Score=86.83 Aligned_cols=49 Identities=29% Similarity=0.645 Sum_probs=40.6
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcC--CCCCCcccccC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH--VTCPVCRANLT 200 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~--~tCP~CR~~l~ 200 (418)
.+...|+||++.|.+ .+.++.|||.||..||..|+..+ ..||+||..+.
T Consensus 11 ~~~~~C~IC~~~~~~---p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~ 61 (92)
T 3ztg_A 11 PDELLCLICKDIMTD---AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDV 61 (92)
T ss_dssp CTTTEETTTTEECSS---CEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSC
T ss_pred CcCCCCCCCChhhcC---ceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCC
Confidence 367899999999986 34565599999999999999753 58999998863
No 41
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.84 E-value=1.7e-09 Score=90.20 Aligned_cols=48 Identities=31% Similarity=0.792 Sum_probs=40.1
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCC---CCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHV---TCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~---tCP~CR~~l~~ 201 (418)
+...|+||++.+.+. ..++ |||.||..||..|+..+. +||+||..+..
T Consensus 20 ~~~~C~IC~~~~~~p---~~~~-CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~ 70 (112)
T 1jm7_A 20 KILECPICLELIKEP---VSTK-CDHIFCKFCMLKLLNQKKGPSQCPLCKNDITK 70 (112)
T ss_dssp HHTSCSSSCCCCSSC---CBCT-TSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCT
T ss_pred CCCCCcccChhhcCe---EECC-CCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCH
Confidence 356899999998763 3466 999999999999998754 89999998764
No 42
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=98.83 E-value=3.1e-09 Score=95.16 Aligned_cols=49 Identities=35% Similarity=0.741 Sum_probs=41.2
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc-CCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~ 201 (418)
....|+||++.|.+ .+.+++ |||.||..||..|+.. +.+||+||..+..
T Consensus 53 ~~~~C~IC~~~~~~--p~~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 102 (165)
T 2ckl_B 53 SELMCPICLDMLKN--TMTTKE-CLHRFCADCIITALRSGNKECPTCRKKLVS 102 (165)
T ss_dssp HHHBCTTTSSBCSS--EEEETT-TCCEEEHHHHHHHHHTTCCBCTTTCCBCCS
T ss_pred CCCCCcccChHhhC--cCEeCC-CCChhHHHHHHHHHHhCcCCCCCCCCcCCC
Confidence 45689999999886 344446 9999999999999997 7789999998864
No 43
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=98.77 E-value=3.4e-09 Score=94.23 Aligned_cols=49 Identities=22% Similarity=0.534 Sum_probs=41.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCC-CCCCcccccCCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHV-TCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~-tCP~CR~~l~~~ 202 (418)
+...|+||++.|.+ ...++ |+|.||..||..|+.... +||+||..+...
T Consensus 77 ~~~~C~IC~~~~~~---pv~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 126 (150)
T 1z6u_A 77 QSFMCVCCQELVYQ---PVTTE-CFHNVCKDCLQRSFKAQVFSCPACRHDLGQN 126 (150)
T ss_dssp HHTBCTTTSSBCSS---EEECT-TSCEEEHHHHHHHHHTTCCBCTTTCCBCCTT
T ss_pred cCCEeecCChhhcC---CEEcC-CCCchhHHHHHHHHHhCCCcCCCCCccCCCC
Confidence 45689999999876 45577 999999999999999754 899999988754
No 44
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=98.72 E-value=4.1e-09 Score=89.51 Aligned_cols=48 Identities=29% Similarity=0.580 Sum_probs=41.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCC-CCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHV-TCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~-tCP~CR~~l~~ 201 (418)
+...|+||++.+.+ .+.++ |||.||..||..|+.... +||+||..+..
T Consensus 17 ~~~~C~IC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (118)
T 3hct_A 17 SKYECPICLMALRE---AVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (118)
T ss_dssp GGGBCTTTCSBCSS---EEECT-TSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCcCChhhcC---eEECC-cCChhhHHHHHHHHhhCCCCCCCCCCCcCH
Confidence 56789999999876 35567 999999999999998765 99999998864
No 45
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=98.70 E-value=2.1e-09 Score=90.65 Aligned_cols=48 Identities=23% Similarity=0.734 Sum_probs=40.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc-CCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~ 201 (418)
++..|+||++.+.+ .+.++ |||.||..||..|+.. +.+||+||..+..
T Consensus 14 ~~~~C~iC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 14 SECQCGICMEILVE---PVTLP-CNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHBCTTTCSBCSS---CEECT-TSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCccCCcccCc---eeEcC-CCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 45789999999876 45567 9999999999999977 6789999998853
No 46
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.70 E-value=5.9e-09 Score=87.97 Aligned_cols=48 Identities=29% Similarity=0.599 Sum_probs=41.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc-CCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~ 201 (418)
+...|+||++.+.+ ...++ |||.||..||..|+.. +.+||+||..+..
T Consensus 22 ~~~~C~IC~~~~~~---p~~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 70 (116)
T 1rmd_A 22 KSISCQICEHILAD---PVETS-CKHLFCRICILRCLKVMGSYCPSCRYPCFP 70 (116)
T ss_dssp HHTBCTTTCSBCSS---EEECT-TSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred CCCCCCCCCcHhcC---cEEcC-CCCcccHHHHHHHHhHCcCcCCCCCCCCCH
Confidence 35689999999876 44576 9999999999999997 7799999998764
No 47
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.70 E-value=5.5e-09 Score=79.77 Aligned_cols=47 Identities=19% Similarity=0.459 Sum_probs=39.9
Q ss_pred CCcccccccccccCCCceEec--CCCCcc-ccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLL--PKCDHV-FHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~l--p~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
++.+|.||++.+.+ ..++ | |||. |+..|+..|...+..||+||+++.
T Consensus 7 ~~~~C~IC~~~~~~---~~~~~~p-CgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 7 AIEPCVICQGRPKN---GCIVHGK-TGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGSCCTTTSSSCSC---EEEEETT-EEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CcCCCCcCCCCCCC---EEEECCC-CCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 45689999998765 3444 8 9999 799999999998899999999874
No 48
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.68 E-value=9e-09 Score=104.57 Aligned_cols=48 Identities=25% Similarity=0.771 Sum_probs=41.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHh-cCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-SHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-~~~tCP~CR~~l~~ 201 (418)
...+|+||++.+.+ ...+| |||.||..||..|+. .+.+||+||..+..
T Consensus 331 ~~~~C~ICle~~~~---pv~lp-CGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~ 379 (389)
T 2y1n_A 331 TFQLCKICAENDKD---VKIEP-CGHLMCTSCLTSWQESEGQGCPFCRCEIKG 379 (389)
T ss_dssp SSSBCTTTSSSBCC---EEEET-TCCEECHHHHHHHHHHTCSBCTTTCCBCCE
T ss_pred CCCCCCccCcCCCC---eEEeC-CCChhhHHHHHHHHhcCCCCCCCCCCccCC
Confidence 34689999999865 66777 999999999999999 68899999998864
No 49
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.67 E-value=7e-09 Score=76.92 Aligned_cols=48 Identities=29% Similarity=0.661 Sum_probs=39.9
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPES 203 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~~ 203 (418)
.+...|+||++.|.+ .+.+| |+|.||..||..| ...||+||+.+....
T Consensus 4 ~~~~~C~IC~~~~~~---p~~l~-CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 4 FQFLRCQQCQAEAKC---PKLLP-CLHTLCSGCLEAS---GMQCPICQAPWPLGA 51 (56)
T ss_dssp CCCSSCSSSCSSCBC---CSCST-TSCCSBTTTCSSS---SSSCSSCCSSSSCCS
T ss_pred ccCCCceEeCCccCC---eEEcC-CCCcccHHHHccC---CCCCCcCCcEeecCC
Confidence 467789999999987 35677 9999999999884 678999999887543
No 50
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=98.66 E-value=1.2e-08 Score=82.19 Aligned_cols=48 Identities=23% Similarity=0.155 Sum_probs=43.1
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+||++.|.+ .++++ |||.|+..||..|+..+.+||+|+..+..
T Consensus 13 ~~~~CpI~~~~m~d---PV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 60 (85)
T 2kr4_A 13 DEFRDPLMDTLMTD---PVRLP-SGTVMDRSIILRHLLNSPTDPFNRQMLTE 60 (85)
T ss_dssp TTTBCTTTCSBCSS---EEECT-TSCEEEHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred hheECcccCchhcC---CeECC-CCCEECHHHHHHHHhcCCCCCCCcCCCCh
Confidence 57899999999998 66787 99999999999999999999999987753
No 51
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=98.65 E-value=1.3e-08 Score=84.70 Aligned_cols=48 Identities=21% Similarity=0.171 Sum_probs=43.2
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+||++.|.+ .++++ |||.|+..||..|+..+.+||+|+.++..
T Consensus 28 ~~~~CpI~~~~m~d---PV~~~-cGhtf~r~~I~~~l~~~~~cP~~~~~l~~ 75 (100)
T 2kre_A 28 DEFRDPLMDTLMTD---PVRLP-SGTIMDRSIILRHLLNSPTDPFNRQTLTE 75 (100)
T ss_dssp TTTBCTTTCSBCSS---EEEET-TTEEEEHHHHHHHTTSCSBCSSSCCBCCT
T ss_pred HhhCCcCccCcccC---CeECC-CCCEEchHHHHHHHHcCCCCCCCCCCCCh
Confidence 57899999999998 66777 99999999999999999999999998764
No 52
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=98.62 E-value=2e-08 Score=83.25 Aligned_cols=48 Identities=23% Similarity=0.169 Sum_probs=42.9
Q ss_pred CCcccccccccccCCCceEecCCCC-ccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCD-HVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~-H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+...|+||++.|.+ .++++ || |.|+..||..|+..+.+||+||.++..
T Consensus 21 ~~~~CpI~~~~m~d---PV~~~-cG~htf~r~cI~~~l~~~~~cP~~~~~l~~ 69 (98)
T 1wgm_A 21 DEFLDPIMSTLMCD---PVVLP-SSRVTVDRSTIARHLLSDQTDPFNRSPLTM 69 (98)
T ss_dssp TTTBCTTTCSBCSS---EEECT-TTCCEEEHHHHHHHTTTSCBCTTTCSBCCT
T ss_pred HhcCCcCccccccC---CeECC-CCCeEECHHHHHHHHHhCCCCCCCCCCCCh
Confidence 57789999999998 56677 99 999999999999998999999988763
No 53
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.60 E-value=3.5e-08 Score=78.47 Aligned_cols=53 Identities=21% Similarity=0.492 Sum_probs=41.0
Q ss_pred CCCcccccccccccCCCce-EecCCCCccccchhHHHHHhc-CCCCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETL-RLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~-r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~~ 202 (418)
.++.+|+||++.+...+.. .-++ |||.||..|+..|+.. +..||+||+.+...
T Consensus 9 ~~~~~CpICle~~~~~d~~~~p~~-CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~ 63 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDDINFFPCT-CGYQICRFCWHRIRTDENGLCPACRKPYPED 63 (78)
T ss_dssp CCCCBCTTTCCBCCTTTTTCCSST-TSCCCCHHHHHHHTTSSCSBCTTTCCBCSSC
T ss_pred ccCCcCCccCccCccccccccccC-CCCCcCHHHHHHHHhcCCCCCCCCCCccCCC
Confidence 3667899999998654332 2234 9999999999998754 56899999988754
No 54
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.60 E-value=1.5e-08 Score=77.05 Aligned_cols=49 Identities=18% Similarity=0.428 Sum_probs=39.5
Q ss_pred CCcccccccccccCCCceEecCCCCcc-ccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHV-FHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...+|.||++...+. .+..+| |||. |+..|+..|...+..||+||+++.
T Consensus 6 ~~~~C~IC~~~~~~~-~~~~~p-CgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 6 LLKPCSLCEKRPRDG-NIIHGR-TGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGSBCTTTSSSBSCE-EEEETT-EEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred cCCCCcccCCcCCCe-EEEecC-CCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 456899999986552 122238 9998 999999999988889999999874
No 55
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.59 E-value=1.2e-08 Score=101.76 Aligned_cols=53 Identities=26% Similarity=0.645 Sum_probs=41.2
Q ss_pred CCCcccccccccccCCCce----EecCCCCccccchhHHHHHhcC-----------CCCCCcccccCC
Q 014794 149 KGALECAVCLSEFEDDETL----RLLPKCDHVFHPHCIDVWLASH-----------VTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~----r~lp~C~H~FH~~CI~~WL~~~-----------~tCP~CR~~l~~ 201 (418)
++..+|+||++.+.++..+ -..++|+|.||..||.+||.+. .+||+||+++..
T Consensus 306 e~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 306 NEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred cCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 4677999999999873322 1223699999999999999852 369999998863
No 56
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.58 E-value=1.5e-08 Score=85.78 Aligned_cols=45 Identities=27% Similarity=0.696 Sum_probs=38.7
Q ss_pred CCcccccccccccCCCceEec-CCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLL-PKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~l-p~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
+...|+||++.|.+ .+.+ + |||.||..||..|+. ..||+||..+.
T Consensus 21 ~~~~C~IC~~~~~~---pv~~~~-CgH~fC~~Ci~~~~~--~~CP~Cr~~~~ 66 (117)
T 1jm7_B 21 KLLRCSRCTNILRE---PVCLGG-CEHIFCSNCVSDCIG--TGCPVCYTPAW 66 (117)
T ss_dssp HTTSCSSSCSCCSS---CBCCCS-SSCCBCTTTGGGGTT--TBCSSSCCBCS
T ss_pred hCCCCCCCChHhhC---ccEeCC-CCCHHHHHHHHHHhc--CCCcCCCCcCc
Confidence 46789999999976 3445 6 999999999999987 78999999874
No 57
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.58 E-value=1.7e-08 Score=88.94 Aligned_cols=50 Identities=20% Similarity=0.449 Sum_probs=41.8
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhcCC-CCCCcccccCCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHV-TCPVCRANLTPE 202 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~-tCP~CR~~l~~~ 202 (418)
.+...|+||++.+.+. ..++ |||.||..||..|+.... +||+||.++...
T Consensus 29 ~~~~~C~IC~~~~~~p---v~~~-CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~ 79 (141)
T 3knv_A 29 EAKYLCSACRNVLRRP---FQAQ-CGHRYCSFCLASILSSGPQNCAACVHEGIYE 79 (141)
T ss_dssp CGGGBCTTTCSBCSSE---EECT-TSCEEEHHHHHHHGGGSCEECHHHHHTTCCC
T ss_pred CcCcCCCCCChhhcCc---EECC-CCCccCHHHHHHHHhcCCCCCCCCCCccccc
Confidence 3677999999999874 4566 999999999999998764 899999987543
No 58
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.52 E-value=3.1e-08 Score=77.50 Aligned_cols=43 Identities=23% Similarity=0.686 Sum_probs=37.4
Q ss_pred CCcccccccccccCCCceEecCCCCcc-ccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHV-FHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
+...|+||++.+.+ ...+| |||. ||..|+..| ..||+||..+.
T Consensus 23 ~~~~C~iC~~~~~~---~~~~p-CgH~~~C~~C~~~~----~~CP~Cr~~i~ 66 (74)
T 4ic3_A 23 EEKLCKICMDRNIA---IVFVP-CGHLVTCKQCAEAV----DKCPMCYTVIT 66 (74)
T ss_dssp HHTBCTTTSSSBCC---EEEET-TCCBCCCHHHHTTC----SBCTTTCCBCS
T ss_pred cCCCCCCCCCCCCC---EEEcC-CCChhHHHHhhhcC----ccCCCcCcCcc
Confidence 45689999998776 66778 9999 999999998 88999999875
No 59
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.44 E-value=9e-08 Score=91.14 Aligned_cols=48 Identities=19% Similarity=0.212 Sum_probs=41.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc-CCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~~ 201 (418)
....|+||++.|.+ .+++| |||.||..||..|+.. +.+||+||.++..
T Consensus 207 ~~~~c~i~~~~~~d---Pv~~~-~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~ 255 (281)
T 2c2l_A 207 DYLCGKISFELMRE---PCITP-SGITYDRKDIEEHLQRVGHFNPVTRSPLTQ 255 (281)
T ss_dssp STTBCTTTCSBCSS---EEECS-SCCEEETTHHHHHHHHTCSSCTTTCCCCCG
T ss_pred cccCCcCcCCHhcC---CeECC-CCCEECHHHHHHHHHHCCCCCcCCCCCCch
Confidence 57789999999988 66787 9999999999999986 4459999998853
No 60
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.43 E-value=1.3e-07 Score=71.57 Aligned_cols=48 Identities=21% Similarity=0.634 Sum_probs=37.7
Q ss_pred CCCcccccccccccCCCceEecCCCC--c---cccchhHHHHHhc--CCCCCCcccccC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCD--H---VFHPHCIDVWLAS--HVTCPVCRANLT 200 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~--H---~FH~~CI~~WL~~--~~tCP~CR~~l~ 200 (418)
++...|.||+++. ++.+ ++| |. | .||..||..|+.. +.+||+|+..+.
T Consensus 4 ~~~~~CrIC~~~~--~~~l-~~P-C~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~ 58 (60)
T 1vyx_A 4 EDVPVCWICNEEL--GNER-FRA-CGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58 (60)
T ss_dssp CSCCEETTTTEEC--SCCC-CCS-CCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCC
T ss_pred CCCCEeEEeecCC--CCce-ecC-cCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeee
Confidence 4667899999983 3334 577 65 4 9999999999975 678999998764
No 61
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.40 E-value=1e-07 Score=78.02 Aligned_cols=48 Identities=19% Similarity=0.467 Sum_probs=39.7
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcC------CCCCC--cccc-cC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH------VTCPV--CRAN-LT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~------~tCP~--CR~~-l~ 200 (418)
....|+||++.|.+ .++++.|||.|+..||..|+..+ .+||+ |+.. +.
T Consensus 6 ~~~~CPI~~~~~~d---PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~ 62 (94)
T 2yu4_A 6 SGFTCPITKEEMKK---PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIR 62 (94)
T ss_dssp SCCBCTTTCSBCSS---EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBC
T ss_pred cEeECcCcCchhcC---CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccC
Confidence 56789999999987 55564599999999999999864 48999 9866 43
No 62
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.34 E-value=1.6e-07 Score=84.20 Aligned_cols=48 Identities=29% Similarity=0.589 Sum_probs=41.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcC-CCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH-VTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~-~tCP~CR~~l~~ 201 (418)
+...|+||++.+.+ .+.++ |||.||..||..|+... .+||+||..+..
T Consensus 17 ~~~~C~IC~~~~~~---pv~~~-CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 65 (170)
T 3hcs_A 17 SKYECPICLMALRE---AVQTP-CGHRFCKACIIKSIRDAGHKCPVDNEILLE 65 (170)
T ss_dssp GGGBCTTTCSBCSS---EEECT-TSCEEEHHHHHHHHHHHCSBCTTTCCBCCG
T ss_pred CCCCCCCCChhhcC---cEECC-CCCHHHHHHHHHHHHhCCCCCCCCccCcch
Confidence 56799999999887 34576 99999999999999874 499999998764
No 63
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=4.1e-07 Score=70.24 Aligned_cols=45 Identities=29% Similarity=0.758 Sum_probs=37.8
Q ss_pred CCCcccccccccccCCCceEecCCCCcc-ccchhHHHHHhcCCCCCCcccccCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHV-FHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
.+...|.||++...+ +.++| |+|. |+..|+.. ...||+||..+..
T Consensus 13 ~~~~~C~IC~~~~~~---~v~~p-CgH~~~C~~C~~~----~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVN---WVLLP-CRHTCLCDGCVKY----FQQCPMCRQFVQE 58 (68)
T ss_dssp CCSSCCSSSSSSCCC---CEETT-TTBCCSCTTHHHH----CSSCTTTCCCCCC
T ss_pred CCCCCCCCcCcCCCC---EEEEC-CCChhhhHHHHhc----CCCCCCCCcchhc
Confidence 356789999998665 77888 9999 99999984 5789999998864
No 64
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.32 E-value=2.2e-07 Score=75.62 Aligned_cols=48 Identities=23% Similarity=0.755 Sum_probs=40.4
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc--------CCCCCC--cccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS--------HVTCPV--CRAN 198 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~--------~~tCP~--CR~~ 198 (418)
+..+|+||++++...+.+.+.+ |+|.||..|+..++.. ...||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~-CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQ-CQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETT-TTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCC-CCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 5678999999998877776666 9999999999999874 237999 9986
No 65
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.29 E-value=2.5e-07 Score=72.28 Aligned_cols=44 Identities=23% Similarity=0.646 Sum_probs=36.3
Q ss_pred CCcccccccccccCCCceEecCCCCcc-ccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHV-FHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+..+|+||++.+.+ ...+| |+|. ||..|+.. ...||+||..+..
T Consensus 24 ~~~~C~IC~~~~~~---~~~~p-CgH~~~C~~C~~~----~~~CP~Cr~~i~~ 68 (75)
T 2ecg_A 24 EEKLCKICMDRNIA---IVFVP-CGHLVTCKQCAEA----VDKCPMCYTVITF 68 (75)
T ss_dssp HHHSCSSSCSSCCC---BCCSS-SCCCCBCHHHHHH----CSBCTTTCCBCCC
T ss_pred CCCCCCcCCCCCCC---EEEec-CCCHHHHHHHhhC----CCCCccCCceecC
Confidence 35689999999766 55677 9999 99999964 4789999998854
No 66
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.22 E-value=5.1e-07 Score=82.73 Aligned_cols=48 Identities=19% Similarity=0.198 Sum_probs=41.4
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcC-CCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH-VTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~-~tCP~CR~~l~~ 201 (418)
....|+||++.|.+ .+++| |||.|+..||..|+..+ .+||+|+.++..
T Consensus 105 ~~f~CPI~~elm~D---PV~~~-~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~ 153 (179)
T 2f42_A 105 DYLCGKISFELMRE---PCITP-SGITYDRKDIEEHLQRVGHFDPVTRSPLTQ 153 (179)
T ss_dssp GGGBCTTTCSBCSS---EEECT-TSCEEEHHHHHHHHHHTCSBCTTTCCBCCG
T ss_pred HhhcccCccccCCC---CeECC-CCCEECHHHHHHHHHhCCCCCCCCcCCCCh
Confidence 56789999999997 56677 99999999999999874 479999988753
No 67
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.18 E-value=4.6e-07 Score=71.97 Aligned_cols=44 Identities=32% Similarity=0.717 Sum_probs=37.1
Q ss_pred CCcccccccccccCCCceEecCCCCcc-ccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHV-FHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+...|.||++.+.+ ...+| |||. |+..|+..| ..||+||..+..
T Consensus 17 ~~~~C~IC~~~~~~---~v~~p-CgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 17 EAMLCMVCCEEEIN---STFCP-CGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp HHTBCTTTSSSBCC---EEEET-TCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred CCCEeEEeCcccCc---EEEEC-CCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 34589999998766 67788 9999 999999987 499999998864
No 68
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.07 E-value=1e-06 Score=88.38 Aligned_cols=43 Identities=26% Similarity=0.760 Sum_probs=37.8
Q ss_pred CCcccccccccccCCCceEecCCCCcc-ccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHV-FHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~-FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
+...|+||++.+.+ ...+| |||. ||..|+..| ..||+||..+.
T Consensus 294 ~~~~C~IC~~~~~~---~v~lp-CgH~~fC~~C~~~~----~~CP~CR~~i~ 337 (345)
T 3t6p_A 294 EERTCKVCMDKEVS---VVFIP-CGHLVVCQECAPSL----RKCPICRGIIK 337 (345)
T ss_dssp TTCBCTTTSSSBCC---EEEET-TCCEEECTTTGGGC----SBCTTTCCBCC
T ss_pred CCCCCCccCCcCCc---eEEcC-CCChhHhHHHHhcC----CcCCCCCCCcc
Confidence 56789999999876 66778 9999 999999998 78999999875
No 69
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.05 E-value=1.8e-06 Score=65.38 Aligned_cols=48 Identities=19% Similarity=0.301 Sum_probs=41.1
Q ss_pred cccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
..|+||++.+.+ ..+++.|||+|...||..|+..+.+||+++.++...
T Consensus 4 ~~CpIs~~~m~d---PV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~ 51 (61)
T 2bay_A 4 MLCAISGKVPRR---PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIE 51 (61)
T ss_dssp CCCTTTCSCCSS---EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGG
T ss_pred EEecCCCCCCCC---CEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChh
Confidence 579999999986 455623999999999999999988999999988643
No 70
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=97.89 E-value=3.7e-06 Score=81.16 Aligned_cols=49 Identities=27% Similarity=0.535 Sum_probs=39.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcC--CCCCC--cccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASH--VTCPV--CRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~--~tCP~--CR~~l~~ 201 (418)
....|+||++.|.+. ++... |||.|+..||..|+..+ .+||+ |+..+..
T Consensus 180 ~el~CPIcl~~f~DP--Vts~~-CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~ 232 (267)
T 3htk_C 180 IELTCPITCKPYEAP--LISRK-CNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSM 232 (267)
T ss_dssp CCSBCTTTSSBCSSE--EEESS-SCCEEEHHHHHHHSTTCSCEECSGGGCSCEECG
T ss_pred eeeECcCccCcccCC--eeeCC-CCCcccHHHHHHHHHhCCCCCCCcccccCcCch
Confidence 567899999999773 43344 99999999999999864 47999 9997753
No 71
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.65 E-value=4.1e-05 Score=72.98 Aligned_cols=50 Identities=22% Similarity=0.555 Sum_probs=40.9
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCC--CCCCcccccCCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHV--TCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~--tCP~CR~~l~~~ 202 (418)
...+|+||.+.+..+..+ +.|+|.||..|+..|+..+. .||.|+..+...
T Consensus 179 ~i~~C~iC~~iv~~g~~C---~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~ 230 (238)
T 3nw0_A 179 AVKICNICHSLLIQGQSC---ETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHE 230 (238)
T ss_dssp TCCBCTTTCSBCSSCEEC---SSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSC
T ss_pred CCCcCcchhhHHhCCccc---CccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCC
Confidence 467899999998876433 45999999999999998754 899999987543
No 72
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.59 E-value=3.4e-05 Score=63.95 Aligned_cols=45 Identities=27% Similarity=0.564 Sum_probs=37.5
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc-CCCCCCcccccC
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-HVTCPVCRANLT 200 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-~~tCP~CR~~l~ 200 (418)
-|.+|--.+.. ..|.+| |+|+|+.+|+..|.++ .++||.|+.++.
T Consensus 3 fC~~C~~Pi~i--ygRmIP-CkHvFCydCa~~~~~~~~k~Cp~C~~~V~ 48 (101)
T 3vk6_A 3 FCDKCGLPIKV--YGRMIP-CKHVFCYDCAILHEKKGDKMCPGCSDPVQ 48 (101)
T ss_dssp BCTTTCSBCSE--EEEEET-TCCEEEHHHHHHHHHTTCCBCTTTCCBCS
T ss_pred ecCccCCCeEE--Eeeecc-ccccHHHHHHHHHHhccCCCCcCcCCeee
Confidence 47888766554 578898 9999999999999865 688999999885
No 73
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=94.58 E-value=0.025 Score=43.25 Aligned_cols=49 Identities=24% Similarity=0.470 Sum_probs=36.0
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcccccCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~l~~ 201 (418)
.....|.||.+. ..+..-..|...||..|++..|.. .-.||.|.....+
T Consensus 10 ~~~~~C~vC~~~----~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~~p 62 (66)
T 2lri_C 10 APGARCGVCGDG----TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDVTP 62 (66)
T ss_dssp CTTCCCTTTSCC----TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCCCC
T ss_pred CCCCCcCCCCCC----CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCCcc
Confidence 355679999753 335555579999999999988865 3479999765543
No 74
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=92.54 E-value=0.13 Score=42.10 Aligned_cols=47 Identities=26% Similarity=0.557 Sum_probs=38.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+...|..|+-+.+. ++. ...|.+|..|+...|.....||+|..+|..
T Consensus 27 G~~nCKsCWf~~k~---LV~--C~dHYLCl~CLtlmL~~SdrCpIC~~pLPt 73 (99)
T 2ko5_A 27 GPQFCKSCWFENKG---LVE--CNNHYLCLNCLTLLLSVSNRCPICKMPLPT 73 (99)
T ss_dssp CCCCCCSSCSCCSS---EEE--CSSCEEEHHHHHHTCSSSSEETTTTEECCC
T ss_pred CcccChhhccccCC---eee--ecchhhHHHHHHHHHhhccCCcccCCcCCc
Confidence 66789999988664 433 256999999999999999999999998864
No 75
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=89.49 E-value=0.17 Score=40.73 Aligned_cols=35 Identities=14% Similarity=0.435 Sum_probs=25.7
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHH
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVW 185 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~W 185 (418)
++..|.||++.+.......-++ |+|.|+..|+..+
T Consensus 2 ee~~C~~C~~~~~~~av~~C~~-C~~~~C~~Cl~~~ 36 (101)
T 2jun_A 2 EKVLCQFCDQDPAQDAVKTCVT-CEVSYCDECLKAT 36 (101)
T ss_dssp CCCBCTTCCSSSCCBCCEEETT-TTEEECHHHHHHH
T ss_pred CCCCCcCCCCCCCCCceEECCc-CChHHhHHHCHHH
Confidence 3568999998754333333365 9999999999983
No 76
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=86.15 E-value=0.57 Score=42.10 Aligned_cols=46 Identities=35% Similarity=0.553 Sum_probs=34.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~l 199 (418)
+++.|.+|... ++ +.....|...||..|+.+-+.. .-.||.|+..-
T Consensus 3 ~~~~C~~C~~~---g~-ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 3 NEDWCAVCQNG---GE-LLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp SCSSCTTTCCC---SS-CEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCccccCCCC---Ce-eeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 45679999854 33 5555679999999999887664 34699998644
No 77
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=85.47 E-value=0.29 Score=36.46 Aligned_cols=49 Identities=24% Similarity=0.584 Sum_probs=35.6
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHh-----cCCCCCCccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-----SHVTCPVCRA 197 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-----~~~tCP~CR~ 197 (418)
.+...|+||...+.++...+.-..|..-||..|+..-.. ....||.|+.
T Consensus 4 ~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~ 57 (64)
T 1we9_A 4 GSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSN 57 (64)
T ss_dssp SSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHT
T ss_pred CCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcC
Confidence 356679999998865554555556999999999875432 3567999975
No 78
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=83.59 E-value=0.53 Score=35.01 Aligned_cols=45 Identities=24% Similarity=0.586 Sum_probs=33.2
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
..+..|.||... ..+..-..|...||..|+..-+.. .-.||.|..
T Consensus 9 ~~~~~C~vC~~~----g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 9 DHQDYCEVCQQG----GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp CCCSSCTTTSCC----SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CCCCCCccCCCC----CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 356789999863 345555579999999999986543 346999965
No 79
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=83.17 E-value=0.37 Score=44.25 Aligned_cols=47 Identities=34% Similarity=0.486 Sum_probs=34.9
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRANL 199 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~l 199 (418)
..+..|.+|... ..+.....|...||..|+.+.+.. .-.||.|+..-
T Consensus 5 ~~~~~C~~C~~~----g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 5 PNEDWCAVCQNG----GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp SSCSSBTTTCCC----EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCC----CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 356789999743 335566679999999999887764 34799998643
No 80
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=82.75 E-value=0.57 Score=42.61 Aligned_cols=47 Identities=28% Similarity=0.593 Sum_probs=34.8
Q ss_pred cccccccccccCCCc---eEecCCCCccccchhHHHH------Hh-----cCCCCCCcccc
Q 014794 152 LECAVCLSEFEDDET---LRLLPKCDHVFHPHCIDVW------LA-----SHVTCPVCRAN 198 (418)
Q Consensus 152 ~~CaICl~~f~~~~~---~r~lp~C~H~FH~~CI~~W------L~-----~~~tCP~CR~~ 198 (418)
..|+||...+.+++. .+....|..-||..|+.-= +. ....||.|+..
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~ 63 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTER 63 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCC
Confidence 469999999988763 5555579999999997531 11 16789999864
No 81
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=81.08 E-value=0.63 Score=34.58 Aligned_cols=46 Identities=26% Similarity=0.553 Sum_probs=32.5
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRAN 198 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~ 198 (418)
..+..|.||.+. + .+..-..|...||..|+..-|.. .-.||.|...
T Consensus 7 ~~~~~C~vC~~~---g-~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 7 HHMEFCRVCKDG---G-ELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SSCSSCTTTCCC---S-SCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred CCCCcCCCCCCC---C-CEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 356679999753 2 34444569999999999875543 3469999764
No 82
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=78.96 E-value=0.5 Score=36.28 Aligned_cols=50 Identities=20% Similarity=0.466 Sum_probs=35.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~l~ 200 (418)
+...|.||..... ++....-..|.-.||..|+..-+.. ...||.|+..+.
T Consensus 17 ~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 17 QIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp EEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 4556999987753 4445555579999999999865542 456999987654
No 83
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=78.82 E-value=1.6 Score=34.96 Aligned_cols=34 Identities=24% Similarity=0.535 Sum_probs=23.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHH
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVW 185 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~W 185 (418)
.+..|.||- .+..++.. -...|+-+||..|+.+-
T Consensus 14 ~D~~C~VC~-~~t~~~l~-pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 14 NDEMCDVCE-VWTAESLF-PCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CSCCCTTTC-CCCSSCCS-SCSSSSSCCCHHHHHHH
T ss_pred CCcccCccc-ccccccee-ccccccccccHhhcccc
Confidence 677899995 33333221 11249999999999995
No 84
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=77.81 E-value=1.8 Score=34.76 Aligned_cols=46 Identities=26% Similarity=0.571 Sum_probs=33.6
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRAN 198 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~ 198 (418)
.....|.+|... + .+..-..|.-.||..|+++=|.. .-.||.|...
T Consensus 23 ~n~~~C~vC~~~---g-~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~ 72 (88)
T 1fp0_A 23 DSATICRVCQKP---G-DLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 72 (88)
T ss_dssp SSSSCCSSSCSS---S-CCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCC
T ss_pred CCCCcCcCcCCC---C-CEEECCCCCCceecccCCCCCCCCcCCCcCCccccCC
Confidence 356789999864 3 34455568899999999876654 3469999753
No 85
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=76.99 E-value=0.97 Score=37.22 Aligned_cols=47 Identities=26% Similarity=0.589 Sum_probs=32.5
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCR 196 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR 196 (418)
.+++.|.||.+.-+..+ +..-..|...||..|+...+.. .-.||.|+
T Consensus 5 ~~~~~C~~C~~~g~~~~-ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 5 SSGANCAVCDSPGDLLD-QFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCSCBTTTCCCCCTTT-SEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCcCCCCCCCCcC-CeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 46788999987633222 3344569999999999987642 33577664
No 86
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=76.28 E-value=1.1 Score=32.45 Aligned_cols=19 Identities=26% Similarity=0.431 Sum_probs=16.1
Q ss_pred cccccccccccHHHHHHHH
Q 014794 290 VSVERYTLRFPDEVRKQLM 308 (418)
Q Consensus 290 ~~~eR~TLrlPe~v~~~~~ 308 (418)
+...+||||||++++++|-
T Consensus 5 ~~~~~~~lRlp~eL~~~l~ 23 (53)
T 1baz_A 5 SKMPQVNLRWPREVLDLVR 23 (53)
T ss_dssp CCSCEEEEECCHHHHHHHH
T ss_pred ccCCeeEEECCHHHHHHHH
Confidence 3467899999999998875
No 87
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=74.92 E-value=0.77 Score=34.27 Aligned_cols=49 Identities=18% Similarity=0.507 Sum_probs=35.2
Q ss_pred CCccccccccccc-CCCceEecCCCCccccchhHHHHHh-------cCCCCCCcccc
Q 014794 150 GALECAVCLSEFE-DDETLRLLPKCDHVFHPHCIDVWLA-------SHVTCPVCRAN 198 (418)
Q Consensus 150 ~~~~CaICl~~f~-~~~~~r~lp~C~H~FH~~CI~~WL~-------~~~tCP~CR~~ 198 (418)
++..|.||..... ....+..-..|.-.||..|+..-+. ..-.||.|...
T Consensus 5 ~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~ 61 (66)
T 2yt5_A 5 SSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFA 61 (66)
T ss_dssp CCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHT
T ss_pred CCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCc
Confidence 5678999998653 3345666667999999999886442 24469999654
No 88
>1wev_A Riken cDNA 1110020M19; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, gene regulation; NMR {Mus musculus} SCOP: g.50.1.2
Probab=74.73 E-value=0.67 Score=37.06 Aligned_cols=51 Identities=20% Similarity=0.447 Sum_probs=36.8
Q ss_pred CCcccccccccccC-CCceEecCCCCccccchhHHHHHh--------cCCCCCCcccccC
Q 014794 150 GALECAVCLSEFED-DETLRLLPKCDHVFHPHCIDVWLA--------SHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~-~~~~r~lp~C~H~FH~~CI~~WL~--------~~~tCP~CR~~l~ 200 (418)
....|.||...-.. ...+..-..|...||..|+.+-|. ..-.||.|+....
T Consensus 15 ~~~~C~vC~~~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~~~~~p~g~W~C~~C~~~~~ 74 (88)
T 1wev_A 15 MGLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQMK 74 (88)
T ss_dssp HCCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHHHC
T ss_pred CCCcCCCCCCCCCCCCCceEECCCCCCeEcCccCCCcccccccCCCCCCeeCccccchhh
Confidence 35679999976432 345666668999999999987654 2447999976543
No 89
>1nla_A Transcriptional repressor ARC; 3(10) helix, beta-ribbon, beta-sheet, structural switching; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=74.73 E-value=1.4 Score=33.34 Aligned_cols=20 Identities=20% Similarity=0.368 Sum_probs=16.9
Q ss_pred cccccccccccHHHHHHHHh
Q 014794 290 VSVERYTLRFPDEVRKQLMT 309 (418)
Q Consensus 290 ~~~eR~TLrlPe~v~~~~~~ 309 (418)
.+..+|+||||++++++|..
T Consensus 5 ~~~~~f~lRlp~eLh~~l~~ 24 (64)
T 1nla_A 5 SKMPQFLNRWPREVLDLVRK 24 (64)
T ss_dssp CCCCGGGGSSCHHHHHHHHH
T ss_pred ccCCceEeeCCHHHHHHHHH
Confidence 35689999999999998763
No 90
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=74.65 E-value=2.3 Score=32.98 Aligned_cols=49 Identities=20% Similarity=0.501 Sum_probs=33.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHh-----cCCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-----SHVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-----~~~tCP~CR~~l 199 (418)
+...| ||...+.++...+.-..|..-||..|+..--. ....||.|+...
T Consensus 11 ~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 11 VPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 44556 99888764444444556999999999864322 356799998654
No 91
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=74.64 E-value=1.1 Score=37.27 Aligned_cols=45 Identities=27% Similarity=0.654 Sum_probs=32.2
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
.|.||...-.+++.+..-..|...||..|+++-|.. .-.||.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 688888653344455555679999999999876654 346999974
No 92
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=73.76 E-value=1.3 Score=36.12 Aligned_cols=46 Identities=20% Similarity=0.438 Sum_probs=31.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc---CCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS---HVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~---~~tCP~CR~ 197 (418)
+...| ||-.....+. ++.-..|.-.||..|+..=+.. ...||.|+.
T Consensus 27 d~vrC-iC~~~~~~~~-mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 27 DVTRC-ICGFTHDDGY-MICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp CBCCC-TTSCCSCSSC-EEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CCEEe-ECCCccCCCc-EEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 34557 8987765544 4455579999999998763332 357999963
No 93
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.47 E-value=0.58 Score=34.04 Aligned_cols=44 Identities=30% Similarity=0.657 Sum_probs=31.2
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
.+..|.||... + .+..-..|...||..|+.+-|.. .-.||.|..
T Consensus 8 ~~~~C~vC~~~---g-~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~~ 55 (56)
T 2yql_A 8 HEDFCSVCRKS---G-QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQD 55 (56)
T ss_dssp SCCSCSSSCCS---S-CCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHHC
T ss_pred CCCCCccCCCC---C-eEEEcCCCCcceECccCCCCcCCCCCCceEChhhhC
Confidence 56789999874 3 34455579999999999875543 335888853
No 94
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=72.78 E-value=0.71 Score=38.14 Aligned_cols=49 Identities=27% Similarity=0.577 Sum_probs=35.3
Q ss_pred CcccccccccccCCCceEecC-CCCccccchhHHHHHh----------cCCCCCCccccc
Q 014794 151 ALECAVCLSEFEDDETLRLLP-KCDHVFHPHCIDVWLA----------SHVTCPVCRANL 199 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp-~C~H~FH~~CI~~WL~----------~~~tCP~CR~~l 199 (418)
...|.||...+.++....... .|..-||..|+.-=-. ....||.|+..-
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~~ 62 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKTK 62 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHTT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCcC
Confidence 357999999987665555554 6899999999863210 356799998653
No 95
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=71.66 E-value=1.6 Score=30.87 Aligned_cols=44 Identities=34% Similarity=0.772 Sum_probs=30.3
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
.|.||...-.. +.+..-..|...||..|+++=+.. .-.||.|+.
T Consensus 2 ~C~vC~~~~~~-~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGED-DKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCC-SCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCC-CCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 48899876433 344455579999999999764443 335999964
No 96
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=70.96 E-value=1.3 Score=34.18 Aligned_cols=20 Identities=20% Similarity=0.672 Sum_probs=16.9
Q ss_pred cccccccccccHHHHHHHHh
Q 014794 290 VSVERYTLRFPDEVRKQLMT 309 (418)
Q Consensus 290 ~~~eR~TLrlPe~v~~~~~~ 309 (418)
...++|+||||++++++|-.
T Consensus 17 r~~~kf~LRlP~eL~~~L~~ 36 (69)
T 3qoq_A 17 RTADKFVVRLPEGMREQIAE 36 (69)
T ss_dssp TTSEEEEEECCTTHHHHHHH
T ss_pred ccCCceEEECCHHHHHHHHH
Confidence 34699999999999998763
No 97
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=69.79 E-value=1.5 Score=39.86 Aligned_cols=44 Identities=27% Similarity=0.610 Sum_probs=31.3
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcccc
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRAN 198 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~ 198 (418)
+..|.+|... ++ +.....|...||..|+.+=+.. .-.||.|+..
T Consensus 2 ~~~C~~C~~~---g~-ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP---GD-LVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC---SS-CCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC---Cc-eeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 4579999854 33 4444468999999999865543 3369999764
No 98
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=69.69 E-value=0.96 Score=34.03 Aligned_cols=45 Identities=31% Similarity=0.565 Sum_probs=32.6
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
..+..|.||.+. + .+..-..|...||..|+.+-|.. .-.||.|..
T Consensus 6 ~~~~~C~vC~~~---g-~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~ 54 (66)
T 1xwh_A 6 KNEDECAVCRDG---G-ELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQ 54 (66)
T ss_dssp SCCCSBSSSSCC---S-SCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHH
T ss_pred CCCCCCccCCCC---C-CEEEcCCCChhhcccccCCCcCcCCCCCeECccccC
Confidence 356789999864 3 35555579999999999865543 346999965
No 99
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=69.34 E-value=4.4 Score=35.31 Aligned_cols=45 Identities=22% Similarity=0.424 Sum_probs=33.1
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHh-----------cCCCCCCccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-----------SHVTCPVCRA 197 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-----------~~~tCP~CR~ 197 (418)
..++.|.||.+. -.+.....|...||..||++-+. ..-.||.|+.
T Consensus 61 g~~d~C~vC~~G----G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 61 GMDEQCRWCAEG----GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp SCBCSCSSSCCC----SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCeecccCCC----CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 467889999864 23555557999999999997652 2447999963
No 100
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=69.32 E-value=2.2 Score=30.43 Aligned_cols=44 Identities=23% Similarity=0.432 Sum_probs=30.9
Q ss_pred ccccccccccCCCceEecC-CCCccccchhHHHHH----hcCCCCCCcc
Q 014794 153 ECAVCLSEFEDDETLRLLP-KCDHVFHPHCIDVWL----ASHVTCPVCR 196 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp-~C~H~FH~~CI~~WL----~~~~tCP~CR 196 (418)
.|.+|...+.+++..+.-. .|..-||..|+..-. .....||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 4789988886655555554 588899999976422 2467899885
No 101
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=68.16 E-value=1.1 Score=39.58 Aligned_cols=47 Identities=19% Similarity=0.616 Sum_probs=33.4
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHH-----hcCCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWL-----ASHVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL-----~~~~tCP~CR~ 197 (418)
+...| ||.....++........|...||..|+..-. .....||.|+.
T Consensus 7 ~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 7 TKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 55678 9998865554455555799999999986322 12567999975
No 102
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=67.54 E-value=1.1 Score=32.89 Aligned_cols=46 Identities=28% Similarity=0.654 Sum_probs=32.9
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~l 199 (418)
.+..|.||... + .+..-..|...||..|+.+-+.. .-.||.|....
T Consensus 4 ~~~~C~vC~~~---g-~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~~ 53 (60)
T 2puy_A 4 HEDFCSVCRKS---G-QLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQM 53 (60)
T ss_dssp CCSSCTTTCCC---S-SCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHHH
T ss_pred CCCCCcCCCCC---C-cEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccChh
Confidence 46689999864 3 34455579999999999975543 33699996543
No 103
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=63.52 E-value=4.3 Score=30.55 Aligned_cols=47 Identities=26% Similarity=0.579 Sum_probs=33.3
Q ss_pred CCcccccccccccCCCceEecC-CCCccccchhHHHHHh----------cCCCCCCcc
Q 014794 150 GALECAVCLSEFEDDETLRLLP-KCDHVFHPHCIDVWLA----------SHVTCPVCR 196 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp-~C~H~FH~~CI~~WL~----------~~~tCP~CR 196 (418)
....|.+|...+.+++..+.-. .|.--||..|+.-=-. ....||.|.
T Consensus 7 ~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvglt~~~~~~l~~e~~~~w~C~~C~ 64 (65)
T 2vpb_A 7 PVYPCGICTNEVNDDQDAILCEASCQKWFHRICTGMTETAYGLLTAEASAVWGCDTCM 64 (65)
T ss_dssp --CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHTCCHHHHHHHHHCTTEEECCHHHH
T ss_pred CcCcCccCCCccCCCCCeEecccCccccCchhccCCCHHHHHHhhccCCCcEECcCcc
Confidence 4567999999988777666666 6999999999753221 144688875
No 104
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=63.50 E-value=1.9 Score=34.38 Aligned_cols=50 Identities=16% Similarity=0.446 Sum_probs=35.0
Q ss_pred CCcccccccccc-cCCCceEecCCCCccccchhHHHHHh--cCCCCCCccccc
Q 014794 150 GALECAVCLSEF-EDDETLRLLPKCDHVFHPHCIDVWLA--SHVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f-~~~~~~r~lp~C~H~FH~~CI~~WL~--~~~tCP~CR~~l 199 (418)
++..|.||...- .+.+.+.....|.-.||..|+..-+. ..-.||.|....
T Consensus 24 ~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~ 76 (88)
T 2l43_A 24 EDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSR 76 (88)
T ss_dssp CCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHT
T ss_pred CCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCcc
Confidence 567899998763 23345666667999999999986432 234699997644
No 105
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=61.87 E-value=7.5 Score=33.34 Aligned_cols=45 Identities=22% Similarity=0.425 Sum_probs=32.1
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHH------h-----cCCCCCCccc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWL------A-----SHVTCPVCRA 197 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL------~-----~~~tCP~CR~ 197 (418)
..+..|.||.+. -.+..-..|...||..||..-+ . ..-.|++|+.
T Consensus 55 g~~~~C~vC~dG----G~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 55 GMDEQCRWCAEG----GNLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp SCBSSCTTTCCC----SEEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCcCeecCCC----CeeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 356779999854 3354555799999999999752 1 2357999954
No 106
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=60.38 E-value=1.8 Score=33.80 Aligned_cols=44 Identities=32% Similarity=0.699 Sum_probs=29.5
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc----C-CCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----H-VTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~-~tCP~CR~ 197 (418)
.|.||...-. .+.+..-..|...||..|+++-|.. . -.||.|+.
T Consensus 28 ~C~vC~~~~d-~~~ll~CD~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 28 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp SBTTTCCCSC-GGGEEECTTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred cCCccCCCCC-CcceeEeCCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 4666665432 2345555579999999999976654 2 47999975
No 107
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=60.29 E-value=5.3 Score=44.79 Aligned_cols=48 Identities=21% Similarity=0.205 Sum_probs=41.4
Q ss_pred CCcccccccccccCCCceEecCCCC-ccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCD-HVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~-H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+...|+|-++-+.+ .+++| .| +.|-..+|..||..+.+||+=|.++..
T Consensus 890 ~~F~cPIs~~lM~D---PVilp-sG~~TydR~~I~~wl~~~~tdP~Tr~~L~~ 938 (968)
T 3m62_A 890 DEFLDPLMYTIMKD---PVILP-ASKMNIDRSTIKAHLLSDSTDPFNRMPLKL 938 (968)
T ss_dssp GGGBCTTTCSBCSS---EEECT-TTCCEEEHHHHHHHHTTCCBCTTTCCBCCG
T ss_pred HHhCCcchhhHHhC---CeEcC-CCCEEECHHHHHHHHhcCCCCCCCCCCCCc
Confidence 46679999999988 67787 76 689999999999999999999988863
No 108
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=60.00 E-value=1.5 Score=35.32 Aligned_cols=48 Identities=29% Similarity=0.553 Sum_probs=34.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCcccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRAN 198 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~ 198 (418)
+...|.||...-.. +.+..-..|...||..|+.+=|.. .-.||.|...
T Consensus 15 ~~~~C~vC~~~~~~-~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~~ 66 (92)
T 2e6r_A 15 DSYICQVCSRGDED-DKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCILA 66 (92)
T ss_dssp CCCCCSSSCCSGGG-GGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHHH
T ss_pred CCCCCccCCCcCCC-CCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcCc
Confidence 55679999876432 345555579999999999855443 3359999653
No 109
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=59.52 E-value=1.7 Score=33.12 Aligned_cols=49 Identities=22% Similarity=0.406 Sum_probs=33.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHH----hcCCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWL----ASHVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL----~~~~tCP~CR~~l 199 (418)
....| ||.....+++..+.-..|..-||..|+..-- .....||.|+..-
T Consensus 15 ~~~~C-~C~~~~~~g~~mI~Cd~C~~W~H~~Cvg~~~~~~~~~~~~C~~C~~~~ 67 (72)
T 1wee_A 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIELS 67 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHHC
T ss_pred cceEe-eCCCccCCCCcEEECCCCCCccCCeeeccCccccCCCcEECCCccCCC
Confidence 44568 7988765555455555699999999987532 2355799997643
No 110
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=58.52 E-value=3.2 Score=31.82 Aligned_cols=47 Identities=23% Similarity=0.587 Sum_probs=31.6
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHH---------hcCCCCCCccccc
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWL---------ASHVTCPVCRANL 199 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL---------~~~~tCP~CR~~l 199 (418)
...| ||......+. .+.-..|..-||..|+..-. .....||.|+..-
T Consensus 16 ~~~C-~C~~~~~~~~-MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~~ 71 (76)
T 1wem_A 16 ALYC-ICRQPHNNRF-MICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILS 71 (76)
T ss_dssp CCCS-TTCCCCCSSC-EEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHHS
T ss_pred CCEE-ECCCccCCCC-EEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCcc
Confidence 4456 8988765433 33444699999999985321 2467899997644
No 111
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=57.69 E-value=7.8 Score=31.19 Aligned_cols=45 Identities=24% Similarity=0.529 Sum_probs=28.5
Q ss_pred CCcccccccccccCCCceEecCC--CC-ccccchhHHHHHhc----CCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPK--CD-HVFHPHCIDVWLAS----HVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~--C~-H~FH~~CI~~WL~~----~~tCP~CR~~l 199 (418)
+...| ||..... ++ .+.... |. ..||..|+. |.. +..||.|+..-
T Consensus 35 e~~yC-iC~~~~~-g~-MI~CD~~dC~~~WfH~~CVg--l~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 35 EPTYC-LCHQVSY-GE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCBCS-TTCCBCC-SC-CCCCSCSSCSCCCCCSTTTT--CSSCCCSSCCCTTTCCCC
T ss_pred CCcEE-ECCCCCC-CC-EeEecCCCCCCCCEecccCC--cCcCCCCCEECcCccCcC
Confidence 44556 9987643 33 333334 55 689999998 332 45799997643
No 112
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=56.98 E-value=12 Score=30.65 Aligned_cols=47 Identities=26% Similarity=0.525 Sum_probs=30.9
Q ss_pred CCcccccccccc-----cCCCceEecCCCCccccchhHHHH------H-hcCCCCCCcc
Q 014794 150 GALECAVCLSEF-----EDDETLRLLPKCDHVFHPHCIDVW------L-ASHVTCPVCR 196 (418)
Q Consensus 150 ~~~~CaICl~~f-----~~~~~~r~lp~C~H~FH~~CI~~W------L-~~~~tCP~CR 196 (418)
....|.+|+..- ..++.+..-..|+..||..|+..+ + ...-.||-|+
T Consensus 4 p~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 62 (112)
T 3v43_A 4 PIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECK 62 (112)
T ss_dssp CCSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHTCCHHHHHHHHTSCCCCTTTC
T ss_pred cCccccccCCchhhCcCCCchhceEhhhcCCCCCCchhcCCHHHHHHhhccccccccCC
Confidence 456799998763 123345555569999999999632 2 2245688875
No 113
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=56.15 E-value=4.7 Score=33.44 Aligned_cols=45 Identities=27% Similarity=0.545 Sum_probs=29.7
Q ss_pred ccccccccccc------CCCceEecCCCCccccchhHHHHHh-------cCCCCCCcc
Q 014794 152 LECAVCLSEFE------DDETLRLLPKCDHVFHPHCIDVWLA-------SHVTCPVCR 196 (418)
Q Consensus 152 ~~CaICl~~f~------~~~~~r~lp~C~H~FH~~CI~~WL~-------~~~tCP~CR 196 (418)
..|.||+..-. +++.+..-..|+..||..|+..+.. ..-.||.|+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~~~~~~~~~~~~W~C~~C~ 59 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFTLNMTEAVKTYKWQCIECK 59 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCCHHHHHHHHHTTCCCGGGC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCChhhhhhccCCCccCccccC
Confidence 46999987642 1234555556999999999986532 244677774
No 114
>2cu8_A Cysteine-rich protein 2; CRP2, CRIP2, ESP1 protein, zinc-binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=55.66 E-value=9.3 Score=28.54 Aligned_cols=41 Identities=27% Similarity=0.525 Sum_probs=32.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+.|-+.+..++.+.. -+..||.+| .+|..|...|..
T Consensus 8 ~~~~C~~C~~~I~~~~~v~a---~~~~~H~~C--------F~C~~C~~~L~~ 48 (76)
T 2cu8_A 8 MASKCPKCDKTVYFAEKVSS---LGKDWHKFC--------LKCERCSKTLTP 48 (76)
T ss_dssp CCCBCTTTCCBCCTTTEEEE---TTEEEETTT--------CBCSSSCCBCCT
T ss_pred CCCCCcCCCCEeECCeEEEE---CCeEeeCCC--------CCCCCCCCccCC
Confidence 34689999999987776543 678999988 569999888864
No 115
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=54.93 E-value=14 Score=29.23 Aligned_cols=40 Identities=23% Similarity=0.420 Sum_probs=30.5
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHHhc
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS 188 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~ 188 (418)
.....|.+|.+.+++..-+.--..=.|.||..|-...+++
T Consensus 13 ~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 13 SGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp CCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHh
Confidence 3567899999999886655322234699999999998876
No 116
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=54.25 E-value=11 Score=28.82 Aligned_cols=45 Identities=24% Similarity=0.529 Sum_probs=28.6
Q ss_pred CCcccccccccccCCCceEecCC--CC-ccccchhHHHHHhc----CCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPK--CD-HVFHPHCIDVWLAS----HVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~--C~-H~FH~~CI~~WL~~----~~tCP~CR~~l 199 (418)
+...| ||..... ++ .+.-.. |. ..||..|+. |.. ...||.|+..-
T Consensus 15 ~~~~C-~C~~~~~-g~-MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 15 EPTYC-LCHQVSY-GE-MIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp SCCCS-TTCCCSC-SS-EECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred CCCEE-ECCCCCC-CC-EeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 45567 8987532 33 433334 55 689999998 333 44699997643
No 117
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=54.07 E-value=3.8 Score=41.19 Aligned_cols=48 Identities=21% Similarity=0.522 Sum_probs=29.9
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHh---c--CCCCCCcccccCCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---S--HVTCPVCRANLTPE 202 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~--~~tCP~CR~~l~~~ 202 (418)
...|++-...+.. .++-.. |.|.-|.+ +..||. . ...||+|.+.+...
T Consensus 249 SL~CPlS~~ri~~--PvRg~~-C~HlQCFD-l~sfL~~~~~~~~W~CPIC~k~~~~~ 301 (371)
T 3i2d_A 249 SLQCPISYTRMKY--PSKSIN-CKHLQCFD-ALWFLHSQLQIPTWQCPVCQIDIALE 301 (371)
T ss_dssp ESBCTTTSSBCSS--EEEETT-CCSSCCEE-HHHHHHHHHHSCCCBCTTTCCBCCGG
T ss_pred eecCCCccccccc--cCcCCc-CCCcceEC-HHHHHHHhhcCCceeCCCCCcccCHH
Confidence 3568887777655 356664 99974333 233443 2 45799998877543
No 118
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=53.79 E-value=3.8 Score=31.71 Aligned_cols=48 Identities=23% Similarity=0.465 Sum_probs=31.3
Q ss_pred CCcccccccccccCCCceEecC--CCCccccchhHHHHHh---------cCCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLP--KCDHVFHPHCIDVWLA---------SHVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp--~C~H~FH~~CI~~WL~---------~~~tCP~CR~~l 199 (418)
....| ||-.....+. .+.-- .|..-||..|+.---. .+..||.|+..-
T Consensus 15 ~~~~C-iC~~~~~~g~-MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~~ 73 (78)
T 1wew_A 15 IKVRC-VCGNSLETDS-MIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLTS 73 (78)
T ss_dssp CCCCC-SSCCCCCCSC-EEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHCC
T ss_pred CCEEe-ECCCcCCCCC-EEEECCccCCccccCEEEccccccccccccCCCCEECCCCCccc
Confidence 45567 8988744443 33333 5999999999864221 356799997643
No 119
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.46 E-value=3.7 Score=31.97 Aligned_cols=44 Identities=25% Similarity=0.625 Sum_probs=30.8
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc-----CCCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-----HVTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-----~~tCP~CR~ 197 (418)
.|.||...- ++..+..-..|...||..|+++=|.. .-.||.|..
T Consensus 28 ~C~vC~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 28 SCRVCGGKH-EPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SCSSSCCCC-CSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCcCcCCcC-CCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 788998653 23445555679999999999865543 336888864
No 120
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=53.11 E-value=11 Score=31.07 Aligned_cols=47 Identities=19% Similarity=0.449 Sum_probs=31.7
Q ss_pred CCCcccccccccccCCCceEecC--CCCccccchhHHHHHhc----CCCCCCcccccCC
Q 014794 149 KGALECAVCLSEFEDDETLRLLP--KCDHVFHPHCIDVWLAS----HVTCPVCRANLTP 201 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp--~C~H~FH~~CI~~WL~~----~~tCP~CR~~l~~ 201 (418)
.+++.|.+|.+ .+ .+..-. .|...||..|+. |.. .-.||.|...+-.
T Consensus 13 ~~~~~C~~C~~---~G-~ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~ 65 (107)
T 4gne_A 13 MHEDYCFQCGD---GG-ELVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECS 65 (107)
T ss_dssp SSCSSCTTTCC---CS-EEEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTC
T ss_pred CCCCCCCcCCC---CC-cEeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCC
Confidence 36678999983 23 344443 488999999998 543 3359988765543
No 121
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=52.50 E-value=10 Score=28.88 Aligned_cols=49 Identities=16% Similarity=0.467 Sum_probs=34.2
Q ss_pred CCCcccccccccc-cCCCceEecCCCCccccchhHHHHHh--cCCCCCCccc
Q 014794 149 KGALECAVCLSEF-EDDETLRLLPKCDHVFHPHCIDVWLA--SHVTCPVCRA 197 (418)
Q Consensus 149 ~~~~~CaICl~~f-~~~~~~r~lp~C~H~FH~~CI~~WL~--~~~tCP~CR~ 197 (418)
.+...|.||...- .+++.+..-..|.-.||..|+..-.. ..-.||.|+.
T Consensus 14 ~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 14 DEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 3567899998764 34456666668999999999875321 1345888864
No 122
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=51.29 E-value=59 Score=26.14 Aligned_cols=53 Identities=13% Similarity=0.328 Sum_probs=35.8
Q ss_pred CCcccccccccccC---CCceEecCCCCccccchhHHHHHh-cCCCCCCcccccCCC
Q 014794 150 GALECAVCLSEFED---DETLRLLPKCDHVFHPHCIDVWLA-SHVTCPVCRANLTPE 202 (418)
Q Consensus 150 ~~~~CaICl~~f~~---~~~~r~lp~C~H~FH~~CI~~WL~-~~~tCP~CR~~l~~~ 202 (418)
....|.||-+++-. ++..+-.-.|+--.|..|.+-=.. .++.||-|...+.-.
T Consensus 15 ~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYkr~ 71 (93)
T 1weo_A 15 DGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYKRL 71 (93)
T ss_dssp SSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCCCC
T ss_pred CCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccccc
Confidence 45689999999653 332222224666778888875433 488999999988643
No 123
>2dj7_A Actin-binding LIM protein 3; LIM domain, Zn binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.83 E-value=12 Score=28.60 Aligned_cols=40 Identities=33% Similarity=0.696 Sum_probs=31.4
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+-|-..+.+++.+.. -+..||.+| .+|-.|...|.
T Consensus 14 ~~~~C~~C~~~I~~~~~v~a---~~~~wH~~C--------F~C~~C~~~L~ 53 (80)
T 2dj7_A 14 GPSHCAGCKEEIKHGQSLLA---LDKQWHVSC--------FKCQTCSVILT 53 (80)
T ss_dssp SCSCCTTTCCCCSSSCCEEE---TTEEECTTT--------CBCSSSCCBCS
T ss_pred CCCCCcCcCCeeCCCeEEEE---CCccccccc--------CCcCcCCCCcC
Confidence 45679999999987766544 568899988 56889988775
No 124
>1wyh_A SLIM 2, skeletal muscle LIM-protein 2; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.56 E-value=13 Score=27.20 Aligned_cols=41 Identities=20% Similarity=0.438 Sum_probs=30.5
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
...|+.|-..+.+.+.+.. .-+..||.+| .+|-.|..+|..
T Consensus 5 ~~~C~~C~~~I~~~~~~~~--a~~~~~H~~C--------F~C~~C~~~L~~ 45 (72)
T 1wyh_A 5 SSGCSACGETVMPGSRKLE--YGGQTWHEHC--------FLCSGCEQPLGS 45 (72)
T ss_dssp CCBCSSSCCBCCSSSCEEC--STTCCEETTT--------CBCTTTCCBTTT
T ss_pred CCCCccCCCccccCccEEE--ECccccCccc--------CeECCCCCcCCC
Confidence 4579999999887544432 2678999988 568899887754
No 125
>2co8_A NEDD9 interacting protein with calponin homology and LIM domains; zinc finger protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=50.03 E-value=13 Score=28.33 Aligned_cols=41 Identities=34% Similarity=0.635 Sum_probs=31.7
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+.|-..+...+.+.. -+..||.+| .+|-.|...|..
T Consensus 14 ~~~~C~~C~~~I~~~e~v~a---~~~~wH~~C--------F~C~~C~~~L~~ 54 (82)
T 2co8_A 14 AGDLCALCGEHLYVLERLCV---NGHFFHRSC--------FRCHTCEATLWP 54 (82)
T ss_dssp SSCBCSSSCCBCCTTTBCCB---TTBCCBTTT--------CBCSSSCCBCCT
T ss_pred CCCCCcccCCCcccceEEEE---CCCeeCCCc--------CEEcCCCCCcCC
Confidence 45689999999877666542 578999998 568889887764
No 126
>1x4k_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=49.14 E-value=15 Score=26.91 Aligned_cols=41 Identities=15% Similarity=0.379 Sum_probs=30.5
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
...|+.|-+.+.+.+.+... -+..||.+| .+|-.|...|..
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a--~~~~~H~~C--------F~C~~C~~~L~~ 45 (72)
T 1x4k_A 5 SSGCQECKKTIMPGTRKMEY--KGSSWHETC--------FICHRCQQPIGT 45 (72)
T ss_dssp CCCBSSSCCCCCSSSCEEEE--TTEEEETTT--------TCCSSSCCCCCS
T ss_pred CCCCccCCCcccCCceEEEE--CcCeecccC--------CcccccCCccCC
Confidence 35799999999876544332 578899888 568899887754
No 127
>1x61_A Thyroid receptor interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=48.92 E-value=18 Score=26.49 Aligned_cols=41 Identities=34% Similarity=0.684 Sum_probs=29.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+.|-..+...+..... -+..||.+| .+|-.|...|.
T Consensus 4 ~~~~C~~C~~~I~~~~~~~~a--~~~~~H~~C--------F~C~~C~~~L~ 44 (72)
T 1x61_A 4 GSSGCGGCGEDVVGDGAGVVA--LDRVFHVGC--------FVCSTCRAQLR 44 (72)
T ss_dssp CCCCCSSSCSCCCSSSCCEEC--SSSEECTTT--------CBCSSSCCBCT
T ss_pred CCCCCccCCCccCCCceEEEE--CCCeEcccC--------CcccccCCcCC
Confidence 345799999988865433322 578899988 56889988884
No 128
>1mnt_A MNT repressor; transcription regulation; NMR {Enterobacteria phage P22} SCOP: a.43.1.1
Probab=48.65 E-value=7.8 Score=30.05 Aligned_cols=18 Identities=33% Similarity=0.615 Sum_probs=15.5
Q ss_pred ccccccccccHHHHHHHH
Q 014794 291 SVERYTLRFPDEVRKQLM 308 (418)
Q Consensus 291 ~~eR~TLrlPe~v~~~~~ 308 (418)
+..+||||||++++++|-
T Consensus 3 ~~~~f~lRi~~eLh~~L~ 20 (76)
T 1mnt_A 3 DDPHFNFRMPMEVREKLK 20 (76)
T ss_dssp SSCCCEEECCHHHHHHHH
T ss_pred CCCeeeeeCCHHHHHHHH
Confidence 456899999999999876
No 129
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=48.29 E-value=7.3 Score=33.05 Aligned_cols=20 Identities=25% Similarity=0.400 Sum_probs=16.7
Q ss_pred cccccccccccHHHHHHHHh
Q 014794 290 VSVERYTLRFPDEVRKQLMT 309 (418)
Q Consensus 290 ~~~eR~TLrlPe~v~~~~~~ 309 (418)
.+..+|+||||++++++|..
T Consensus 16 ~~~~kf~LRLP~eLh~~La~ 35 (120)
T 1u9p_A 16 GGGPQFNLRWPREVLDLVRK 35 (120)
T ss_dssp TTCCEEEEECCHHHHHHHHH
T ss_pred CCCCeeEEeCCHHHHHHHHH
Confidence 34579999999999999763
No 130
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=48.28 E-value=4.9 Score=30.42 Aligned_cols=46 Identities=22% Similarity=0.621 Sum_probs=30.7
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHh---cCCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---SHVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~~~tCP~CR~ 197 (418)
+...| ||..... ++..+.-..|..-||..|+..--. ....||.|+.
T Consensus 18 ~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 18 GLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CceEe-ECCCcCC-CCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 55668 9987755 333444446999999999865322 2456888864
No 131
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=48.21 E-value=9 Score=28.44 Aligned_cols=43 Identities=28% Similarity=0.546 Sum_probs=30.8
Q ss_pred cccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCc
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVC 195 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~C 195 (418)
..|--|...|.+.. ...-++|++.|+.+|=.---+.=..||.|
T Consensus 16 ~~C~~C~~~~~~~~-~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQH-VYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSE-EECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCc-cEECCccCcCcccchhHHHHhhccCCcCC
Confidence 46999999986432 34567899999999944433344579988
No 132
>1g47_A Pinch protein; LIM domain, Zn finger, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=47.57 E-value=17 Score=26.93 Aligned_cols=42 Identities=19% Similarity=0.547 Sum_probs=31.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+-|-..+...+.+... -+..||.+| .+|-.|..+|..
T Consensus 10 ~~~~C~~C~~~I~~~~~~~~a--~~~~~H~~C--------F~C~~C~~~L~~ 51 (77)
T 1g47_A 10 ASATCERCKGGFAPAEKIVNS--NGELYHEQC--------FVCAQCFQQFPE 51 (77)
T ss_dssp CCCBCSSSCCBCCSTTTCEEE--TTEEECTTT--------CCCTTTCCCCGG
T ss_pred CCCCchhcCCccCCCceEEEe--CccEecccc--------CeECCCCCCCCC
Confidence 456899999999865554332 577899988 568889887754
No 133
>1x4l_A Skeletal muscle LIM-protein 3; LIM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=47.53 E-value=19 Score=26.38 Aligned_cols=41 Identities=22% Similarity=0.519 Sum_probs=30.1
Q ss_pred CCcccccccccccC--CCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFED--DETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~--~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+-|-..+.. ++.+.. .-+..||.+| .+|-.|...|.
T Consensus 4 ~~~~C~~C~~~I~~~~~~~~~~--a~~~~wH~~C--------F~C~~C~~~L~ 46 (72)
T 1x4l_A 4 GSSGCAGCTNPISGLGGTKYIS--FEERQWHNDC--------FNCKKCSLSLV 46 (72)
T ss_dssp CSCSBTTTTBCCCCSSSCSCEE--CSSCEECTTT--------CBCSSSCCBCT
T ss_pred CCCCCcCCCccccCCCCcceEE--ECCcccCccc--------CEeccCCCcCC
Confidence 34579999999886 333332 2678999988 57899988875
No 134
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=47.46 E-value=38 Score=23.68 Aligned_cols=24 Identities=8% Similarity=0.326 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Q 014794 78 MAIIILVLISTFFIVAMFSIYVRH 101 (418)
Q Consensus 78 ~~iiiivlv~~~fil~~~~i~~r~ 101 (418)
++..++.++.++++.+.+.+|+|+
T Consensus 14 Ia~~vVGvll~vi~~l~~~~~~RR 37 (44)
T 2jwa_A 14 IISAVVGILLVVVLGVVFGILIKR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHhheeh
Confidence 333333344444444444555554
No 135
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=47.05 E-value=15 Score=28.65 Aligned_cols=38 Identities=18% Similarity=0.287 Sum_probs=27.3
Q ss_pred CCCCcccccccccccCCCceEecCCCCccccchhHHHH
Q 014794 148 GKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVW 185 (418)
Q Consensus 148 ~~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~W 185 (418)
+.+...|.+|...|..-..----..||++|+..|....
T Consensus 18 d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~~ 55 (84)
T 1z2q_A 18 DEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRHR 55 (84)
T ss_dssp TTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCCE
T ss_pred CCCCCCCcCcCCccccchhcccccCCCcEEChHHhCCe
Confidence 34667899999999864433333469999999996553
No 136
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=46.74 E-value=41 Score=25.57 Aligned_cols=27 Identities=7% Similarity=0.189 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccCc
Q 014794 80 IIILVLISTFFIVAMFSIYVRHCSDSR 106 (418)
Q Consensus 80 iiiivlv~~~fil~~~~i~~r~c~~~~ 106 (418)
|++..+++++++.++.+++..+|.+++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRr 38 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRR 38 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHH
Confidence 666667777777766666444455444
No 137
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=46.55 E-value=5.2 Score=30.44 Aligned_cols=44 Identities=34% Similarity=0.714 Sum_probs=29.4
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc-----CCCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-----HVTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-----~~tCP~CR~ 197 (418)
.|.||...- ++..+..-..|...||..|+++=|.. .-.||.|+.
T Consensus 20 ~C~~C~~~~-~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 20 ACHLCGGRQ-DPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp SBTTTCCCS-CGGGEEECTTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCcCCCCcC-CCCCEEEcCCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 466776542 23345555579999999999865543 336888864
No 138
>1x63_A Skeletal muscle LIM-protein 1; LIM domain, four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=45.51 E-value=21 Score=26.78 Aligned_cols=41 Identities=20% Similarity=0.508 Sum_probs=31.1
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
...|+.|-..+..++.+... -+..||.+| .+|-.|...|..
T Consensus 15 ~~~C~~C~~~I~~~~~~~~a--~~~~~H~~C--------F~C~~C~~~L~~ 55 (82)
T 1x63_A 15 SPKCKGCFKAIVAGDQNVEY--KGTVWHKDC--------FTCSNCKQVIGT 55 (82)
T ss_dssp SCBCSSSCCBCCSSSCEEEC--SSCEEETTT--------CCCSSSCCCCTT
T ss_pred CCcCccCCcccccCceEEEE--Ccccccccc--------CchhhCCCccCC
Confidence 45899999999876654332 578999888 568899888764
No 139
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=44.90 E-value=16 Score=28.45 Aligned_cols=35 Identities=20% Similarity=0.421 Sum_probs=24.5
Q ss_pred CCCCcccccccccccCCCceEecCCCCccccchhH
Q 014794 148 GKGALECAVCLSEFEDDETLRLLPKCDHVFHPHCI 182 (418)
Q Consensus 148 ~~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI 182 (418)
+.+...|.+|...|..-..----..||.+|+..|.
T Consensus 11 d~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs 45 (84)
T 1x4u_A 11 TNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCC 45 (84)
T ss_dssp CCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTS
T ss_pred CCCCCcCcCcCCccccchhhhhhcCCCcEEChhhc
Confidence 34567899999999754322223359999999883
No 140
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=44.87 E-value=16 Score=28.42 Aligned_cols=36 Identities=25% Similarity=0.513 Sum_probs=26.2
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHH
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDV 184 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~ 184 (418)
++...|.+|...|..-..----..||.+|+..|...
T Consensus 17 ~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 17 DEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred ccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 456689999999986433233346999999999654
No 141
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=42.77 E-value=6.9 Score=36.68 Aligned_cols=44 Identities=32% Similarity=0.699 Sum_probs=27.0
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc-----CCCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS-----HVTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~-----~~tCP~CR~ 197 (418)
.|.+|...-. +..+.....|...||..|+++=|.. .-.||.|..
T Consensus 176 ~C~vC~~~~~-~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 176 ACHLCGGRQD-PDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp SCSSSCCCCC---CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCcCCCCCCC-CCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 5778865422 2344455579999999999965543 236999965
No 142
>1a7i_A QCRP2 (LIM1); LIM domain containing proteins, metal-binding protein, zinc finger; NMR {Coturnix japonica} SCOP: g.39.1.3 g.39.1.3 PDB: 2o10_A
Probab=42.66 E-value=11 Score=28.58 Aligned_cols=41 Identities=32% Similarity=0.660 Sum_probs=30.1
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+.|-..+.+++.+.. -+..||.+| .+|-.|..+|..
T Consensus 6 ~~~~C~~C~~~I~~~~~~~a---~~~~~H~~C--------F~C~~C~~~L~~ 46 (81)
T 1a7i_A 6 GGNKCGACGRTVYHAEEVQC---DGRSFHRCC--------FLCMVCRKNLDS 46 (81)
T ss_dssp --CBCSSSCCBCSSTTEEEE---TTEEEESSS--------EECSSSCCEECS
T ss_pred CCCcCcCcCccccCceeEEe---CCccccccc--------CccCCCCCCCCC
Confidence 34579999999987775433 678999888 458889887754
No 143
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=42.03 E-value=13 Score=31.25 Aligned_cols=35 Identities=17% Similarity=0.417 Sum_probs=25.2
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHH
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDV 184 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~ 184 (418)
....|.+|...|..-..---...||++||..|...
T Consensus 68 ~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 68 EVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred CCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 45689999999986432223346999999999544
No 144
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=41.71 E-value=45 Score=23.21 Aligned_cols=23 Identities=9% Similarity=0.257 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 014794 79 AIIILVLISTFFIVAMFSIYVRH 101 (418)
Q Consensus 79 ~iiiivlv~~~fil~~~~i~~r~ 101 (418)
+.++.-++.++++.+.+.+|+|+
T Consensus 15 ~gVVgGv~~~~ii~~~~~~~~RR 37 (44)
T 2ks1_B 15 TGMVGALLLLLVVALGIGLFMRR 37 (44)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT
T ss_pred eehhHHHHHHHHHHHHHHHHhhh
Confidence 33333344444444455555554
No 145
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=41.55 E-value=15 Score=29.18 Aligned_cols=36 Identities=22% Similarity=0.379 Sum_probs=26.3
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHH
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVW 185 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~W 185 (418)
+...|.+|...|..-..--....||++|+..|...+
T Consensus 19 ~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 19 EAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp GCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred cCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 456799999999764333334469999999997654
No 146
>2d8y_A Eplin protein; LIM domain, epithelial protein LOST in neoplasm, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=40.85 E-value=21 Score=27.62 Aligned_cols=41 Identities=27% Similarity=0.543 Sum_probs=31.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+-|-..+.+.+.+. .-+..||.+| .+|-.|...|..
T Consensus 14 ~~~~C~~C~~~I~~~~~v~---a~~~~~H~~C--------F~C~~C~~~L~~ 54 (91)
T 2d8y_A 14 ARETCVECQKTVYPMERLL---ANQQVFHISC--------FRCSYCNNKLSL 54 (91)
T ss_dssp SSCBCTTTCCBCCTTSEEE---CSSSEEETTT--------CBCTTTCCBCCT
T ss_pred CCCcCccCCCccCCceeEE---ECCCEECCCC--------CeeCCCCCCCCC
Confidence 3568999999998766553 2678999988 568888887754
No 147
>3f6q_B LIM and senescent cell antigen-like-containing domain protein 1; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 2kbx_B 3ixe_B
Probab=40.49 E-value=20 Score=25.88 Aligned_cols=42 Identities=19% Similarity=0.554 Sum_probs=31.6
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+-|-..+...+.+... -+..||..|+ .|-.|...|..
T Consensus 10 ~~~~C~~C~~~i~~~e~~~~~--~~~~~H~~CF--------~C~~C~~~L~~ 51 (72)
T 3f6q_B 10 ASATCERCKGGFAPAEKIVNS--NGELYHEQCF--------VCAQCFQQFPE 51 (72)
T ss_dssp TTCBCTTTCCBCCTTCEEEEE--TTEEEETTTS--------SCTTTCCCCGG
T ss_pred CCccchhcCccccCCceEEEe--CcCeeCcCCC--------cccCCCCCCCC
Confidence 455899999999877755332 5778999885 68889887754
No 148
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=40.33 E-value=57 Score=22.71 Aligned_cols=17 Identities=29% Similarity=0.563 Sum_probs=8.0
Q ss_pred HHHHHHHHHHHHHHHhc
Q 014794 85 LISTFFIVAMFSIYVRH 101 (418)
Q Consensus 85 lv~~~fil~~~~i~~r~ 101 (418)
++.++++.+...+|+|+
T Consensus 20 v~~v~ii~~~~~~~~RR 36 (44)
T 2l2t_A 20 LFILVIVGLTFAVYVRR 36 (44)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhhh
Confidence 44444444444555554
No 149
>1iml_A CRIP, cysteine rich intestinal protein; metal-binding protein, LIM domain protein; NMR {Rattus rattus} SCOP: g.39.1.3 g.39.1.3
Probab=39.56 E-value=17 Score=26.95 Aligned_cols=38 Identities=26% Similarity=0.545 Sum_probs=24.2
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
.|+.|-+.+..++.+.. -+..||.+| .+|..|...|..
T Consensus 2 ~C~~C~~~I~~~~~v~a---~~~~~H~~C--------F~C~~C~~~L~~ 39 (76)
T 1iml_A 2 KCPKCDKEVYFAERVTS---LGKDWHRPC--------LKCEKCGKTLTS 39 (76)
T ss_dssp BCTTTSSBCCGGGEEEE---TTEEEETTT--------CBCTTTCCBCCT
T ss_pred cCCCCCCEEECceEEEE---CCccccCCC--------CCccccCccCCC
Confidence 47777777765554432 466777776 457777776653
No 150
>1x68_A FHL5 protein; four-and-A-half LIM protein 5, zinc finger domain, AN actin- interacting protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=39.25 E-value=25 Score=26.09 Aligned_cols=40 Identities=20% Similarity=0.524 Sum_probs=29.3
Q ss_pred CcccccccccccC--CCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFED--DETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~--~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+.|-..+.+ ...... .-+..||.+| .+|-.|...|.
T Consensus 5 ~~~C~~C~~~I~~~g~~~~~~--a~~~~wH~~C--------F~C~~C~~~L~ 46 (76)
T 1x68_A 5 SSGCVACSKPISGLTGAKFIC--FQDSQWHSEC--------FNCGKCSVSLV 46 (76)
T ss_dssp CCCCTTTCCCCCTTTTCCEEE--ETTEEEEGGG--------CBCTTTCCBCS
T ss_pred CCCCccCCCcccCCCCceeEE--ECCcccCccc--------CChhhCCCcCC
Confidence 4579999999885 333322 2678999988 56889988875
No 151
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=38.18 E-value=18 Score=30.95 Aligned_cols=35 Identities=14% Similarity=0.329 Sum_probs=24.3
Q ss_pred CCCccccccccccc-CCCceEecCCCCccccchhHH
Q 014794 149 KGALECAVCLSEFE-DDETLRLLPKCDHVFHPHCID 183 (418)
Q Consensus 149 ~~~~~CaICl~~f~-~~~~~r~lp~C~H~FH~~CI~ 183 (418)
.+...|++|...|. ....-+....|.|.+|..|=.
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 46778999999983 323334444688888888744
No 152
>2l3k_A Rhombotin-2, linker, LIM domain-binding protein 1; LMO2(LIM2)-LDB1(LID), chimera, fusion protein, oncoprotein; NMR {Mus musculus} PDB: 2l6y_B 2l6z_C
Probab=38.01 E-value=17 Score=29.92 Aligned_cols=37 Identities=27% Similarity=0.604 Sum_probs=26.0
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCccccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANL 199 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l 199 (418)
.|+.|-..+...+.+.. .-+..||..| ..|-.|...|
T Consensus 10 ~C~~C~~~I~~~e~~~~--a~~~~~H~~C--------F~C~~C~~~L 46 (123)
T 2l3k_A 10 LCASCDKRIRAYEMTMR--VKDKVYHLEC--------FKCAACQKHF 46 (123)
T ss_dssp CCSSSSCCCCTTCCCCC--CSSCCCCTTT--------CBCTTTCCBC
T ss_pred cccCCCCeecCCceEEE--ECCccccccc--------CccccCCCCC
Confidence 68899888876554422 2577888888 4577787776
No 153
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=37.78 E-value=22 Score=28.07 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=26.2
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHH
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVW 185 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~W 185 (418)
+...|.+|...|..-..---...||++|+..|....
T Consensus 8 ~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~~ 43 (88)
T 1wfk_A 8 MESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSFS 43 (88)
T ss_dssp CCSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCEE
T ss_pred cCCCCcCcCCcccCccccccCCCCCCEEChhHcCCc
Confidence 456899999999865433333469999999996653
No 154
>2cor_A Pinch protein; LIM domain, particularly interesting NEW Cys- His protein, LIM and senescent cell antigen-like domains 1, structural genomics; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=37.77 E-value=28 Score=26.24 Aligned_cols=40 Identities=25% Similarity=0.595 Sum_probs=29.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+-|-..+. ++.+. .-+..||.+| .+|-.|...|..
T Consensus 14 ~~~~C~~C~~~I~-~~~v~---a~~~~~H~~C--------F~C~~C~~~L~~ 53 (79)
T 2cor_A 14 GKYICQKCHAIID-EQPLI---FKNDPYHPDH--------FNCANCGKELTA 53 (79)
T ss_dssp CCCBCTTTCCBCC-SCCCC---CSSSCCCTTT--------SBCSSSCCBCCT
T ss_pred CCCCCccCCCEec-ceEEE---ECcceeCCCC--------CEeCCCCCccCC
Confidence 4568999999888 33332 2678899888 579999888864
No 155
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=37.35 E-value=6.8 Score=40.67 Aligned_cols=49 Identities=22% Similarity=0.489 Sum_probs=32.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHh-----cCCCCCCccccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-----SHVTCPVCRANL 199 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-----~~~tCP~CR~~l 199 (418)
+...| ||...+..+...+....|.--||..|+.---. ....||.|+...
T Consensus 36 ~~~yC-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 89 (488)
T 3kv5_D 36 PPVYC-VCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYHCPNCAVLH 89 (488)
T ss_dssp CCEET-TTTEECCTTSCEEEBTTTCCEEEHHHHTCCGGGGGGEEEBCCHHHHHHH
T ss_pred CCeEE-eCCCcCCCCCCeEEccCCCCceeeeecCcCcccccCCCEEECCCCcCCc
Confidence 33445 99887754444555556999999999854322 246799998643
No 156
>2d8x_A Protein pinch; LIM domain, pinch protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=36.72 E-value=34 Score=24.79 Aligned_cols=40 Identities=23% Similarity=0.653 Sum_probs=29.4
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+.|-+.+.+ +.+.. -+..||.+| .+|-.|...|..
T Consensus 4 ~~~~C~~C~~~I~~-~~~~a---~~~~~H~~C--------F~C~~C~~~L~~ 43 (70)
T 2d8x_A 4 GSSGCHQCGEFIIG-RVIKA---MNNSWHPEC--------FRCDLCQEVLAD 43 (70)
T ss_dssp CSSBCSSSCCBCCS-CCEEE---TTEEECTTT--------SBCSSSCCBCSS
T ss_pred CCCcCccCCCEecc-eEEEE---CcccccccC--------CEeCCCCCcCCC
Confidence 45679999998874 33332 678999988 468899888764
No 157
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=36.71 E-value=18 Score=33.12 Aligned_cols=34 Identities=24% Similarity=0.447 Sum_probs=24.7
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHH
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDV 184 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~ 184 (418)
+..|.+|...|..-..---...||++||..|...
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCC
Confidence 4689999999975432233346999999999554
No 158
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=36.44 E-value=5.2 Score=33.87 Aligned_cols=49 Identities=16% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRAN 198 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~ 198 (418)
....|..|-..|..-..--....||.+||..|..........|-.|...
T Consensus 18 ~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~~ 66 (120)
T 1y02_A 18 LEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRF 66 (120)
T ss_dssp --CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHHH
T ss_pred ccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHHH
Confidence 4458999999987543222334699999999977665556668888553
No 159
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=36.01 E-value=10 Score=27.79 Aligned_cols=43 Identities=26% Similarity=0.546 Sum_probs=27.4
Q ss_pred CCcccccccccccCCCceEecCC--CC-ccccchhHHHHHhc----CCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPK--CD-HVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~--C~-H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
+...| ||.... .+ ....-.. |. .-||..|+. |.. +..||.|+.
T Consensus 8 e~~yC-~C~~~~-~g-~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 8 EPTYC-LCHQVS-YG-EMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp CCEET-TTTEEC-CS-EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCcEE-ECCCCC-CC-CeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 44456 998763 23 3444445 65 699999998 333 446999864
No 160
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=35.78 E-value=24 Score=35.28 Aligned_cols=48 Identities=23% Similarity=0.452 Sum_probs=29.8
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHh---c--CCCCCCcccccCCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---S--HVTCPVCRANLTPE 202 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~--~~tCP~CR~~l~~~ 202 (418)
...|+|-...+.. .+|-.. |.|.=|.+ +..||. . ...||+|.+.+...
T Consensus 215 SL~CPlS~~ri~~--P~Rg~~-C~HlqCFD-l~sfL~~~~~~~~W~CPiC~k~~~~~ 267 (360)
T 4fo9_A 215 SLMCPLGKMRLTI--PCRAVT-CTHLQCFD-AALYLQMNEKKPTWICPVCDKKAAYE 267 (360)
T ss_dssp ESBCTTTCSBCSS--EEEETT-CCCCCCEE-HHHHHHHHHHSCCCBCTTTCSBCCGG
T ss_pred eeeCCCccceecc--CCcCCC-CCCCccCC-HHHHHHHHhhCCCeECCCCCcccCHH
Confidence 3468887777655 356664 99973322 233333 2 45799999877643
No 161
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=35.61 E-value=25 Score=26.61 Aligned_cols=32 Identities=19% Similarity=0.332 Sum_probs=23.3
Q ss_pred cccccccccccCCCceEecCCCCccccchhHH
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFHPHCID 183 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~ 183 (418)
..|.+|...|..-..----..||.+|+..|..
T Consensus 12 ~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 12 DACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp SBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 48999999987643222333599999999954
No 162
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=35.60 E-value=19 Score=33.29 Aligned_cols=35 Identities=23% Similarity=0.467 Sum_probs=25.6
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHH
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVW 185 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~W 185 (418)
...|.+|...|..-..---...||++||..|-...
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~~ 198 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSKY 198 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCEE
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcCCc
Confidence 45899999999864333334469999999996543
No 163
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=35.48 E-value=7.9 Score=38.60 Aligned_cols=38 Identities=13% Similarity=0.264 Sum_probs=0.0
Q ss_pred CCCcccccccccccCCCceEecCCCCccccchhHHHHH
Q 014794 149 KGALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWL 186 (418)
Q Consensus 149 ~~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL 186 (418)
.....|.+|...|..-..-.....||++||..|...++
T Consensus 373 ~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~ 410 (434)
T 3mpx_A 373 THVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKY 410 (434)
T ss_dssp --------------------------------------
T ss_pred ccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCee
Confidence 34568999999987532222233599999999987664
No 164
>2dar_A PDZ and LIM domain protein 5; enigma homolog protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=35.17 E-value=38 Score=26.00 Aligned_cols=40 Identities=20% Similarity=0.443 Sum_probs=29.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+.|-..+. ++.+. . -+..||.+| ..|-.|...|..
T Consensus 24 ~~~~C~~C~~~I~-~~~v~--a-~~~~~H~~C--------F~C~~C~~~L~~ 63 (90)
T 2dar_A 24 RTPMCAHCNQVIR-GPFLV--A-LGKSWHPEE--------FNCAHCKNTMAY 63 (90)
T ss_dssp CCCBBSSSCCBCC-SCEEE--E-TTEEECTTT--------CBCSSSCCBCSS
T ss_pred CCCCCccCCCEec-ceEEE--E-CCccccccC--------CccCCCCCCCCC
Confidence 4568999999985 33332 2 688999988 578899888863
No 165
>2l4z_A DNA endonuclease RBBP8, LIM domain transcription LMO4; protein-protein interaction, LIM-interaction DOM LMO4, RBBP8/CTIP, LIM-only protein; HET: DNA; NMR {Homo sapiens}
Probab=35.02 E-value=21 Score=29.64 Aligned_cols=39 Identities=31% Similarity=0.612 Sum_probs=30.0
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+-|-..+.....+.. -+..||..| .+|-.|...|.
T Consensus 61 ~~~C~~C~~~I~~~~~v~a---~~~~wH~~C--------F~C~~C~~~L~ 99 (123)
T 2l4z_A 61 WKRCAGCGGKIADRFLLYA---MDSYWHSRC--------LKCSSCQAQLG 99 (123)
T ss_dssp CSBBSSSSSBCCSSSEEEE---TTEEEETTT--------SBCTTTCCBGG
T ss_pred CCcCcCCCCCcCCcEEEEe---CCcEEcccc--------cCcCcCCCccc
Confidence 4579999999886543433 678999988 67999998885
No 166
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=34.93 E-value=6.5 Score=32.11 Aligned_cols=44 Identities=27% Similarity=0.613 Sum_probs=30.0
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
.|.||...-.+ +.+..-..|...||..|+++=|.. .-.||.|..
T Consensus 56 ~C~~C~~~~~~-~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~ 103 (111)
T 2ysm_A 56 VCQNCKQSGED-SKMLVCDTCDKGYHTFCLQPVMKSVPTNGWKCKNCRI 103 (111)
T ss_dssp CCTTTCCCSCC-TTEEECSSSCCEEEGGGSSSCCSSCCSSCCCCHHHHC
T ss_pred cccccCccCCC-CCeeECCCCCcHHhHHhcCCccccCCCCCcCCcCCcC
Confidence 57777665333 345555579999999999875543 346888865
No 167
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=34.19 E-value=11 Score=27.73 Aligned_cols=43 Identities=23% Similarity=0.533 Sum_probs=26.8
Q ss_pred CCcccccccccccCCCceEecCC--CC-ccccchhHHHHHhc----CCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPK--CD-HVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~--C~-H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
+...| ||.... .+ ....-.. |. ..||..|+. |.. ...||.|+.
T Consensus 9 e~~~C-~C~~~~-~g-~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 9 EPTYC-LCHQVS-YG-EMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp CCEET-TTTEEC-CS-EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCEE-ECCCcC-CC-CEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 34456 898763 23 3444444 44 689999998 433 446998864
No 168
>1zfo_A LAsp-1; LIM domain, zinc-finger, metal-binding protein; NMR {Sus scrofa} SCOP: g.39.1.4
Probab=33.88 E-value=14 Score=23.36 Aligned_cols=28 Identities=25% Similarity=0.469 Sum_probs=20.5
Q ss_pred cccccccccccCCCceEecCCCCccccchhH
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFHPHCI 182 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI 182 (418)
..|+.|-..+-..+.+. .-+..||..|+
T Consensus 4 ~~C~~C~k~Vy~~Ek~~---~~g~~~Hk~CF 31 (31)
T 1zfo_A 4 PNCARCGKIVYPTEKVN---CLDKFWHKACF 31 (31)
T ss_dssp CBCSSSCSBCCGGGCCC---SSSSCCCGGGC
T ss_pred CcCCccCCEEecceeEE---ECCeEecccCC
Confidence 46999988877665553 26788999884
No 169
>1nyp_A Pinch protein; LIM domain, protein recognition, cell adhesion; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 PDB: 1u5s_B
Probab=33.08 E-value=23 Score=25.41 Aligned_cols=39 Identities=15% Similarity=0.387 Sum_probs=28.8
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
...|+.|-..+. ++.+ .. -+..||.+| .+|-.|..+|..
T Consensus 5 ~~~C~~C~~~I~-~~~~--~a-~~~~~H~~C--------F~C~~C~~~L~~ 43 (66)
T 1nyp_A 5 VPICGACRRPIE-GRVV--NA-MGKQWHVEH--------FVCAKCEKPFLG 43 (66)
T ss_dssp CCEETTTTEECC-SCEE--CC-TTSBEETTT--------CBCTTTCCBCSS
T ss_pred CCCCcccCCEec-ceEE--EE-CccccccCc--------CEECCCCCCCCC
Confidence 457999999988 4332 32 678999988 568899888753
No 170
>1v6g_A Actin binding LIM protein 2; LIM domain, zinc binding domain, ablim2, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.94 E-value=41 Score=25.12 Aligned_cols=38 Identities=32% Similarity=0.778 Sum_probs=28.4
Q ss_pred cccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
..|+.|-..+.. +.+.. -+..||.+| .+|-.|...|..
T Consensus 16 ~~C~~C~~~I~~-~~v~a---~~~~wH~~C--------F~C~~C~~~L~~ 53 (81)
T 1v6g_A 16 TRCFSCDQFIEG-EVVSA---LGKTYHPDC--------FVCAVCRLPFPP 53 (81)
T ss_dssp CBCTTTCCBCCS-CCEEE---TTEEECTTT--------SSCSSSCCCCCS
T ss_pred CcCccccCEecc-ceEEE---CCceeCccC--------CccccCCCCCCC
Confidence 479999998873 43332 678999988 568899888764
No 171
>1x64_A Alpha-actinin-2 associated LIM protein; LIM domain, PDZ and LIM domain 3, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=31.75 E-value=43 Score=25.62 Aligned_cols=40 Identities=28% Similarity=0.512 Sum_probs=29.8
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
....|+-|-+.+.. +.+ . .-+..||.+| .+|-.|...|..
T Consensus 24 ~~~~C~~C~~~I~~-~~~--~-a~~~~~H~~C--------F~C~~C~~~L~~ 63 (89)
T 1x64_A 24 RMPLCDKCGSGIVG-AVV--K-ARDKYRHPEC--------FVCADCNLNLKQ 63 (89)
T ss_dssp SCCBCTTTCCBCCS-CCE--E-SSSCEECTTT--------CCCSSSCCCTTT
T ss_pred cCCCcccCCCEecc-cEE--E-ECCceECccC--------CEecCCCCCCCC
Confidence 45679999999885 333 2 2678999988 568899888764
No 172
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=31.41 E-value=12 Score=31.01 Aligned_cols=26 Identities=31% Similarity=0.709 Sum_probs=16.9
Q ss_pred CCCccccchhHHHHHhcCCCCCCcccccCCC
Q 014794 172 KCDHVFHPHCIDVWLASHVTCPVCRANLTPE 202 (418)
Q Consensus 172 ~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~~ 202 (418)
+||+.|. .=+.....||.|+..-...
T Consensus 72 ~CG~~F~-----~~~~kPsrCP~CkSe~Ie~ 97 (105)
T 2gmg_A 72 KCGFVFK-----AEINIPSRCPKCKSEWIEE 97 (105)
T ss_dssp TTCCBCC-----CCSSCCSSCSSSCCCCBCC
T ss_pred hCcCeec-----ccCCCCCCCcCCCCCccCC
Confidence 5888881 1123457899999865543
No 173
>1x62_A C-terminal LIM domain protein 1; PDZ and LIM domain protein 1, LIM domain protein CLP-36, contractIle protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=31.03 E-value=31 Score=25.86 Aligned_cols=39 Identities=26% Similarity=0.457 Sum_probs=29.0
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+-|-+.+.. +.+ . .-+..||.+| .+|-.|...|.
T Consensus 14 ~~~~C~~C~~~I~~-~~~--~-a~~~~~H~~C--------F~C~~C~~~L~ 52 (79)
T 1x62_A 14 KLPMCDKCGTGIVG-VFV--K-LRDRHRHPEC--------YVCTDCGTNLK 52 (79)
T ss_dssp CCCCCSSSCCCCCS-SCE--E-CSSCEECTTT--------TSCSSSCCCHH
T ss_pred CCCccccCCCCccC-cEE--E-ECcceeCcCc--------CeeCCCCCCCC
Confidence 45689999998875 333 2 2678999998 46889988774
No 174
>2ehe_A Four and A half LIM domains 3; FHL-3, skeletal muscle LIM- protein 2, SLIM 2, FHL3, SLIM2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.19 E-value=40 Score=25.20 Aligned_cols=41 Identities=29% Similarity=0.531 Sum_probs=29.2
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
...|+.|-..+..++.+.. .-+..||..| ..|-.|..+|..
T Consensus 15 ~~~C~~C~~~I~~~~~~~~--a~~~~~H~~C--------F~C~~C~~~L~~ 55 (82)
T 2ehe_A 15 ANTCAECQQLIGHDSRELF--YEDRHFHEGC--------FRCCRCQRSLAD 55 (82)
T ss_dssp SCBCTTTCCBCCSSCCBCC--CSSCCCBTTT--------SBCTTTCCBCSS
T ss_pred CCcCccCCCccccCcEEEE--eCCccccccC--------CeecCCCCccCC
Confidence 3479999999885443322 2578899888 568899888763
No 175
>2cur_A Skeletal muscle LIM-protein 1; four and A half LIM domains protein 1, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=29.48 E-value=51 Score=23.71 Aligned_cols=39 Identities=23% Similarity=0.641 Sum_probs=28.7
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+-|-..+.. +.+.. -+..||.+| .+|-.|..+|.
T Consensus 4 ~~~~C~~C~~~I~~-~~~~a---~~~~~H~~C--------F~C~~C~~~L~ 42 (69)
T 2cur_A 4 GSSGCVKCNKAITS-GGITY---QDQPWHADC--------FVCVTCSKKLA 42 (69)
T ss_dssp CCCCCSSSCCCCCT-TCEEE---TTEEECTTT--------TBCTTTCCBCT
T ss_pred CcCCCcccCCEeCc-ceEEE---CccccccCc--------CEECCCCCCCC
Confidence 34579999998864 33332 578899888 46889988875
No 176
>2rsd_A E3 SUMO-protein ligase SIZ1; E3 SUMO ligase, plant homeodomain (PHD), histone binding; NMR {Oryza sativa japonica group}
Probab=29.16 E-value=7.4 Score=29.18 Aligned_cols=46 Identities=22% Similarity=0.550 Sum_probs=27.7
Q ss_pred CcccccccccccCCCceEec-CCCCccccchhHHHHH---h-----cCCCCCCccc
Q 014794 151 ALECAVCLSEFEDDETLRLL-PKCDHVFHPHCIDVWL---A-----SHVTCPVCRA 197 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~l-p~C~H~FH~~CI~~WL---~-----~~~tCP~CR~ 197 (418)
...| ||-.....+..+.-- +.|..-||..|+.--- . .+..||.||.
T Consensus 10 ~v~C-~C~~~~~~g~mI~CD~~~C~~W~H~~Cvgi~~~~~~~~~~p~~~~C~~Cr~ 64 (68)
T 2rsd_A 10 KVRC-ICSSTMVNDSMIQCEDQRCQVWQHLNCVLIPDKPGESAEVPPVFYCELCRL 64 (68)
T ss_dssp EECC-TTCCCSCCSCEEECSCTTTCEEEETTTSCCCSSTTSCCCCCSSCCCHHHHH
T ss_pred CEEe-ECCCCcCCCCEEEECCCCCCCeEchhhCCCCcccccccCCCCcEECcCccC
Confidence 3456 897665555433221 1488899999974211 0 1457999974
No 177
>2egq_A FHL1 protein; LIM domain, four and A half LIM domains protein 1, skeletal muscle LIM- protein 1, SLIM 1, structural genomics NPPSFA; NMR {Homo sapiens}
Probab=28.99 E-value=39 Score=24.87 Aligned_cols=40 Identities=25% Similarity=0.564 Sum_probs=29.0
Q ss_pred CcccccccccccC---CCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFED---DETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~---~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+-|-..+.+ ....... -+..||..| .+|-.|...|.
T Consensus 15 ~~~C~~C~~~I~~~g~~~~~~~a--~~~~~H~~C--------F~C~~C~~~L~ 57 (77)
T 2egq_A 15 AKKCAGCKNPITGFGKGSSVVAY--EGQSWHDYC--------FHCKKCSVNLA 57 (77)
T ss_dssp CCCCSSSCCCCCCCSSCCCEEEE--TTEEEETTT--------CBCSSSCCBCT
T ss_pred CccCcccCCcccCCCCCceeEEE--CcceeCccc--------CEehhcCCCCC
Confidence 3579999999885 3333222 578999988 56899988875
No 178
>2d8z_A Four and A half LIM domains 2; skeletal muscle LIM-protein 3, LIM-domain protein DRAL, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=28.89 E-value=45 Score=24.03 Aligned_cols=39 Identities=23% Similarity=0.649 Sum_probs=28.7
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+.|-..+.. +.+ . .-+..||.+| .+|-.|..+|.
T Consensus 4 ~~~~C~~C~~~I~~-~~~--~-a~~~~~H~~C--------F~C~~C~~~L~ 42 (70)
T 2d8z_A 4 GSSGCVQCKKPITT-GGV--T-YREQPWHKEC--------FVCTACRKQLS 42 (70)
T ss_dssp CCCBCSSSCCBCCS-SEE--E-SSSSEEETTT--------SBCSSSCCBCT
T ss_pred CCCCCcccCCeecc-ceE--E-ECccccCCCC--------CccCCCCCcCC
Confidence 34579999999875 333 2 2678999988 56889988875
No 179
>2g6q_A Inhibitor of growth protein 2; protein-peptide complex, gene regulation, apoptosis; HET: M3L; 2.00A {Mus musculus}
Probab=28.50 E-value=17 Score=26.95 Aligned_cols=43 Identities=26% Similarity=0.545 Sum_probs=27.1
Q ss_pred CCcccccccccccCCCceEecCC--CC-ccccchhHHHHHhc----CCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPK--CD-HVFHPHCIDVWLAS----HVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~--C~-H~FH~~CI~~WL~~----~~tCP~CR~ 197 (418)
+...| ||.... .+ ..+.-.. |. .-||..|+. |.. +..||.|+.
T Consensus 10 e~~yC-~C~~~~-~g-~MI~CD~c~C~~~WfH~~Cvg--l~~~p~~~w~Cp~C~~ 59 (62)
T 2g6q_A 10 EPTYC-LCNQVS-YG-EMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRG 59 (62)
T ss_dssp CCEET-TTTEEC-CS-EEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHT
T ss_pred CCcEE-ECCCCC-CC-CeeeeeCCCCCcccEecccCC--cCcCCCCCEECcCccc
Confidence 34556 898753 23 3444444 44 799999998 332 456999964
No 180
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=27.80 E-value=8.7 Score=31.74 Aligned_cols=46 Identities=26% Similarity=0.608 Sum_probs=30.9
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhc----CCCCCCccccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLAS----HVTCPVCRANL 199 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~----~~tCP~CR~~l 199 (418)
.|.||...-.. ..+..-..|...||..|+.+=|.. .-.||.|...+
T Consensus 60 ~C~~C~~~~~~-~~ll~Cd~C~~~yH~~Cl~ppl~~~P~g~W~C~~C~~~~ 109 (114)
T 2kwj_A 60 SCILCGTSEND-DQLLFCDDCDRGYHMYCLNPPVAEPPEGSWSCHLCWELL 109 (114)
T ss_dssp CCTTTTCCTTT-TTEEECSSSCCEEETTTSSSCCSSCCSSCCCCHHHHHHH
T ss_pred ccCcccccCCC-CceEEcCCCCccccccccCCCccCCCCCCeECccccchh
Confidence 57888765333 345555579999999999865443 33588886543
No 181
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=27.50 E-value=21 Score=23.78 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=13.7
Q ss_pred ccccccccHHHHHHHH
Q 014794 293 ERYTLRFPDEVRKQLM 308 (418)
Q Consensus 293 eR~TLrlPe~v~~~~~ 308 (418)
.|+|++||+++..+|-
T Consensus 3 ~ritv~l~~~l~~~Ld 18 (45)
T 2cpg_A 3 KRLTITLSESVLENLE 18 (45)
T ss_dssp EEEEEEEEHHHHHHHH
T ss_pred ceEEEecCHHHHHHHH
Confidence 4899999999987764
No 182
>3j1r_A Archaeal adhesion filament core; helical polymer, flagellar filament, cell adhesion, structur protein; 7.50A {Ignicoccus hospitalis}
Probab=27.45 E-value=1.1e+02 Score=18.96 Aligned_cols=21 Identities=29% Similarity=0.602 Sum_probs=12.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHH
Q 014794 75 DPSMAIIILVLISTFFIVAMF 95 (418)
Q Consensus 75 ~~s~~iiiivlv~~~fil~~~ 95 (418)
+|.++.++++++++.-.+.++
T Consensus 2 spiVA~~lLIviav~aaVlly 22 (26)
T 3j1r_A 2 SPVIATLLLILIAVAAAVLLY 22 (26)
T ss_dssp CHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 456666666666655444443
No 183
>2cup_A Skeletal muscle LIM-protein 1; four and half LIM domains protein 1, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3 g.39.1.3
Probab=27.36 E-value=60 Score=25.14 Aligned_cols=40 Identities=20% Similarity=0.479 Sum_probs=22.3
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+.|-+.+..+..+... -+..||..| .+|-.|..+|.
T Consensus 5 ~~~C~~C~~~I~~~~~~~~a--~~~~~H~~C--------F~C~~C~~~L~ 44 (101)
T 2cup_A 5 SSGCVECRKPIGADSKEVHY--KNRFWHDTC--------FRCAKCLHPLA 44 (101)
T ss_dssp CCBCSSSCCBCCSSSCEEEE--TTEEEETTT--------CCCSSSCCCTT
T ss_pred CCcCcccCCcccCCceEEEE--CccChhhcC--------CcccccCCCCC
Confidence 34677777777542222221 456677666 35666666653
No 184
>2khu_A Immunoglobulin G-binding protein G, DNA polymerase IOTA; UBM, ubiquitin-binding domain, translesion synthesis, TLS, ubiquitin-binding protein; NMR {Streptococcus SP} PDB: 2khw_A 2l0f_B*
Probab=26.69 E-value=19 Score=29.45 Aligned_cols=26 Identities=31% Similarity=0.590 Sum_probs=19.0
Q ss_pred cccccccccccHHHHHHHHhcCCccccce
Q 014794 290 VSVERYTLRFPDEVRKQLMTRGKLKRTAS 318 (418)
Q Consensus 290 ~~~eR~TLrlPe~v~~~~~~~~~l~r~~S 318 (418)
=+.+=| -+||++|.+|||++. +|+.+
T Consensus 68 VDP~VF-yeLP~eVQ~ELla~W--r~~~~ 93 (108)
T 2khu_A 68 IDPQVF-YELPEAVQKELLAEW--KRTGS 93 (108)
T ss_dssp CCHHHH-TTSCHHHHHHHHHHH--HHHC-
T ss_pred CCHHHH-HHccHHHHHHHHHHH--HHhCC
Confidence 355667 899999999999865 44444
No 185
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=26.55 E-value=72 Score=23.16 Aligned_cols=31 Identities=10% Similarity=0.177 Sum_probs=13.8
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHhccccCc
Q 014794 76 PSMAIIILVLISTFFIVAMF-SIYVRHCSDSR 106 (418)
Q Consensus 76 ~s~~iiiivlv~~~fil~~~-~i~~r~c~~~~ 106 (418)
+.|.|++.++.+++++.++. .+|.+.+.+|.
T Consensus 11 p~wiIi~svl~GLllL~li~~~LwK~GFFkR~ 42 (54)
T 2knc_A 11 PIWWVLVGVLGGLLLLTILVLAMWKVGFFKRN 42 (54)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 34555555555544443333 33333444443
No 186
>3kqi_A GRC5, PHD finger protein 2; metal-binding, zinc-finger, histone-binding, NUC protein; HET: M3L; 1.78A {Homo sapiens} SCOP: g.50.1.2
Probab=26.46 E-value=16 Score=27.83 Aligned_cols=46 Identities=22% Similarity=0.465 Sum_probs=30.9
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHh-----cCCCCCCcccc
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-----SHVTCPVCRAN 198 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-----~~~tCP~CR~~ 198 (418)
...||...+..+...+.-..|.--||..|+..--. ....||.|+..
T Consensus 11 ~yCiC~~~~~~~~~MI~Cd~C~~WfH~~Cvg~~~~~~~~~~~~~C~~C~~~ 61 (75)
T 3kqi_A 11 VYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNCEKT 61 (75)
T ss_dssp EETTTTEECCTTSCEEECTTTCCEEEHHHHTCCTTTGGGBSSCCCHHHHHH
T ss_pred eEEECCCcCCCCCCEEEcCCCCCCEecccccccccccCCCCEEECCCCccc
Confidence 34489877654444445556999999999964322 24679999764
No 187
>1x6a_A LIMK-2, LIM domain kinase 2; LIM-kinase 2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=26.19 E-value=38 Score=25.26 Aligned_cols=38 Identities=18% Similarity=0.538 Sum_probs=27.9
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+.|-+.+. ++.+ . .-+..||.+| .+|-.|...|.
T Consensus 15 ~~~C~~C~~~I~-~~~~--~-a~~~~~H~~C--------F~C~~C~~~L~ 52 (81)
T 1x6a_A 15 GEFCHGCSLLMT-GPFM--V-AGEFKYHPEC--------FACMSCKVIIE 52 (81)
T ss_dssp SCBCTTTCCBCC-SCCB--C-CTTCCBCTTS--------CBCTTTCCBCC
T ss_pred CCcCccCCCCcC-ceEE--E-ECCceecccc--------CCccCCCCccC
Confidence 347999999888 3332 2 2678999888 56889988875
No 188
>2jmi_A Protein YNG1, ING1 homolog 1; PHD, histone, recognition, yeast, protein binding; NMR {Saccharomyces cerevisiae} PDB: 2jmj_A*
Probab=25.67 E-value=20 Score=28.67 Aligned_cols=43 Identities=19% Similarity=0.407 Sum_probs=27.1
Q ss_pred CCcccccccccccCCCceEecCCCC---ccccchhHHHHHhc----CCCCCC-ccc
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCD---HVFHPHCIDVWLAS----HVTCPV-CRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~---H~FH~~CI~~WL~~----~~tCP~-CR~ 197 (418)
+...| ||..... ++ .+....|. ..||..|+. |.. ...||. |+.
T Consensus 25 ~~~yC-iC~~~~~-g~-MI~CD~c~C~~eWfH~~CVg--l~~~p~~~W~Cp~cC~~ 75 (90)
T 2jmi_A 25 EEVYC-FCRNVSY-GP-MVACDNPACPFEWFHYGCVG--LKQAPKGKWYCSKDCKE 75 (90)
T ss_dssp CSCCS-TTTCCCS-SS-EECCCSSSCSCSCEETTTSS--CSSCTTSCCCSSHHHHH
T ss_pred CCcEE-EeCCCCC-CC-EEEecCCCCccccCcCccCC--CCcCCCCCccCChhhcc
Confidence 45567 9987532 33 44444554 689999986 332 457999 863
No 189
>3o7a_A PHD finger protein 13 variant; PHF13, zinc finger, PHD domain, nuclear protein, structural structural genomics consortium, SGC, protein binding; HET: M3L; 1.67A {Homo sapiens}
Probab=25.66 E-value=16 Score=25.76 Aligned_cols=41 Identities=20% Similarity=0.545 Sum_probs=26.3
Q ss_pred cccccccCCCceEecCCCCccccchhHHHHHh---cCCCCCCccc
Q 014794 156 VCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA---SHVTCPVCRA 197 (418)
Q Consensus 156 ICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~---~~~tCP~CR~ 197 (418)
||..... +...+.-..|..-||..|+..--. ....||.|+.
T Consensus 8 ~C~~~~~-~~~MI~Cd~C~~W~H~~Cvgi~~~~~~~~~~C~~C~~ 51 (52)
T 3o7a_A 8 FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 51 (52)
T ss_dssp TTCCBCT-TCCEEECTTTCCEEETTTTTCCGGGCCSSCCCHHHHT
T ss_pred EeCCcCC-CCCEEEcCCCCccccccccCCCcccCCCcEECcCCCC
Confidence 6766544 333344446999999999864322 2457888864
No 190
>1wig_A KIAA1808 protein; LIM domain, zinc finger, metal-binding protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=25.33 E-value=52 Score=24.26 Aligned_cols=38 Identities=21% Similarity=0.555 Sum_probs=28.3
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+-|-..+.. +.+ . .-+..||.+| .+|-.|..+|.
T Consensus 5 ~~~C~~C~~~I~~-~~v--~-a~~~~wH~~C--------F~C~~C~~~L~ 42 (73)
T 1wig_A 5 SSGCDSCEKYITG-RVL--E-AGEKHYHPSC--------ALCVRCGQMFA 42 (73)
T ss_dssp CCSCSSSCCCCSS-CCB--C-CSSCCBCTTT--------SCCSSSCCCCC
T ss_pred cCCcccCCCEecC-eeE--E-eCCCCCCCCc--------CEeCCCCCCCC
Confidence 4579999988875 222 2 3678999988 56889988876
No 191
>1j2o_A FLIN2, fusion of rhombotin-2 and LIM domain-binding protein 1; LIM-interaction-domain (LID), metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=23.48 E-value=55 Score=26.33 Aligned_cols=38 Identities=29% Similarity=0.733 Sum_probs=24.8
Q ss_pred cccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
..|+-|-..+.+.+.+.. -+..||.+| .+|-.|..+|.
T Consensus 4 ~~C~~C~~~I~~~~~~~a---~~~~wH~~C--------F~C~~C~~~L~ 41 (114)
T 1j2o_A 4 LTCGGCQQNIGDRYFLKA---IDQYWHEDC--------LSCDLCGCRLG 41 (114)
T ss_dssp BCBSSSCSCBCSSEEEEC---SSSEECTTT--------CCCSSSCSCCC
T ss_pred CCCcCCCCeeCCcEEEEE---CchhHHHhc--------CcccccCCchh
Confidence 468888877765433322 566788777 56777877664
No 192
>2dlo_A Thyroid receptor-interacting protein 6; LIM domain, OPA-interacting protein 1, zyxin related protein 1 (ZRP-1), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=22.93 E-value=66 Score=23.95 Aligned_cols=39 Identities=36% Similarity=0.766 Sum_probs=28.5
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
....|+-|-..+.+ ..+.. -+..||.+| .+|..|...|.
T Consensus 14 ~~~~C~~C~~~I~~-~~~~a---~~~~~H~~C--------F~C~~C~~~L~ 52 (81)
T 2dlo_A 14 TLEKCATCSQPILD-RILRA---MGKAYHPGC--------FTCVVCHRGLD 52 (81)
T ss_dssp SCCBCTTTCCBCCS-CCEEE---TTEEECTTT--------CBCSSSCCBCT
T ss_pred CCCccccCCCeecc-eeEEE---CCccccHHh--------cCcccCCCccC
Confidence 34579999998874 33322 678999888 56999988875
No 193
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=22.75 E-value=59 Score=32.71 Aligned_cols=44 Identities=27% Similarity=0.600 Sum_probs=32.3
Q ss_pred CCcccccccccccCCCceEecC--CCCccccchhHHHHHh----------cCCCCCCccc
Q 014794 150 GALECAVCLSEFEDDETLRLLP--KCDHVFHPHCIDVWLA----------SHVTCPVCRA 197 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp--~C~H~FH~~CI~~WL~----------~~~tCP~CR~ 197 (418)
.+..|.+|-+. ..+.... .|...||..||+.++. ..-.|=+|.-
T Consensus 92 ~~~yCr~C~~G----g~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p 147 (386)
T 2pv0_B 92 YQSYCSICCSG----ETLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLP 147 (386)
T ss_dssp SBCSCTTTCCC----SSCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSS
T ss_pred CcccceEcCCC----CeEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCC
Confidence 56789999864 3354544 6999999999999982 2457888864
No 194
>2rgt_A Fusion of LIM/homeobox protein LHX3, linker, INSU enhancer protein ISL-1; protein-protein complex, LIM domain, Zn finger, activator, D binding; 2.05A {Mus musculus} PDB: 3mmk_A
Probab=22.42 E-value=45 Score=28.81 Aligned_cols=27 Identities=33% Similarity=0.735 Sum_probs=11.7
Q ss_pred ccccccccccCCCceEecCCCCccccchh
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHC 181 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~C 181 (418)
.|+.|-..+...+.+.. .-++.||.+|
T Consensus 67 ~C~~C~~~I~~~~~v~~--a~~~~~H~~C 93 (169)
T 2rgt_A 67 KCAACQLGIPPTQVVRR--AQDFVYHLHC 93 (169)
T ss_dssp BCTTTCCBCCTTSEEEE--ETTEEEEGGG
T ss_pred cccccccccCCCcEEEE--cCCceEeeCC
Confidence 45555544444332211 1345555555
No 195
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=22.18 E-value=56 Score=26.62 Aligned_cols=48 Identities=10% Similarity=0.106 Sum_probs=22.7
Q ss_pred CcccccccccccC-CCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFED-DETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~-~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
-..|..|-..+.+ +..... .=+..||..|...-+.....|-.|...|.
T Consensus 32 CF~C~~C~~~L~~~~~~~~~--~~g~~yC~~cy~~~f~~~~~C~~C~~~I~ 80 (122)
T 1m3v_A 32 CLKCSSCQAQLGDIGTSSYT--KSGMILCRNDYIRLFGNSGAGGSGGHMGS 80 (122)
T ss_dssp HHCCSSSCCCTTTSEECCEE--ETTEEECHHHHHHHHCCCCSSSCSSCCSC
T ss_pred CCCcCCCCCcccccCCeEEE--ECCeeecHHHHHHHcCCCCccccCCCCcC
Confidence 3455555555542 111111 24455555555554433335666666554
No 196
>1x3h_A Leupaxin; paxillin family, protein-protein interaction, LIM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=21.98 E-value=78 Score=23.36 Aligned_cols=39 Identities=26% Similarity=0.638 Sum_probs=28.9
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
...|+.|-..+.+ +.+.. -+..||.+| .+|-.|..+|..
T Consensus 15 ~~~C~~C~~~I~~-~~v~a---~~~~~H~~C--------F~C~~C~~~L~~ 53 (80)
T 1x3h_A 15 SPKCGGCNRPVLE-NYLSA---MDTVWHPEC--------FVCGDCFTSFST 53 (80)
T ss_dssp SCBCTTTCCBCCS-SCEEE---TTEEECTTT--------CBCSSSCCBSCS
T ss_pred CCccccCCCeecc-eeEEE---CCCeEecCc--------CChhhCCCCCCC
Confidence 3579999998886 33332 578899888 568999888864
No 197
>2iyb_E Testin, TESS, TES; LIM domain, SH3-binding, tumour supressor LIM domain EVH1 DO cell motility, phosphorylation, cytoskeleton; 2.35A {Homo sapiens}
Probab=21.86 E-value=55 Score=23.43 Aligned_cols=39 Identities=18% Similarity=0.520 Sum_probs=28.7
Q ss_pred cccccccccccCCCceEecCCCCcccc--chhHHHHHhcCCCCCCcccccC
Q 014794 152 LECAVCLSEFEDDETLRLLPKCDHVFH--PHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 152 ~~CaICl~~f~~~~~~r~lp~C~H~FH--~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
..|+-|-..+..++..... -+..|| .+| .+|-.|..+|.
T Consensus 3 ~~C~~C~~~I~~~~~~v~a--~~~~wH~~~~C--------F~C~~C~~~L~ 43 (65)
T 2iyb_E 3 VVCQGCHNAIDPEVQRVTY--NNFSWHASTEC--------FLCSCCSKCLI 43 (65)
T ss_dssp EECTTTSSEECTTSCEEEE--TTEEEETTTTT--------SBCTTTCCBCT
T ss_pred CCCcCCCCeeccCceEEEE--CCCccCCCCCC--------EECCCCCCcCC
Confidence 3699999998875333222 678999 888 57889988875
No 198
>1rut_X Flinc4, fusion protein of LMO4 protein and LIM domain- binding protein 1; B-tandem zipper, protein binding; 1.30A {Mus musculus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 2dfy_X 2xjz_I 2xjy_B
Probab=21.72 E-value=48 Score=29.20 Aligned_cols=38 Identities=29% Similarity=0.690 Sum_probs=25.0
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
.|+.|-..+...+.+.. .-++.||..| .+|-.|...|.
T Consensus 71 ~C~~C~~~I~~~e~~i~--a~~~~~H~~C--------F~C~~C~~~L~ 108 (188)
T 1rut_X 71 ACSACGQSIPASELVMR--AQGNVYHLKC--------FTCSTCRNRLV 108 (188)
T ss_dssp ECTTTCCEECTTSEEEE--ETTEEECGGG--------CBCTTTCCBCC
T ss_pred ccccCCCccccCcEEEE--cCCCEEeCCC--------CeECCCCCCCC
Confidence 58888777765543322 2577888877 46777777664
No 199
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=20.99 E-value=2.1e+02 Score=19.60 Aligned_cols=19 Identities=16% Similarity=0.293 Sum_probs=9.0
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 014794 76 PSMAIIILVLISTFFIVAM 94 (418)
Q Consensus 76 ~s~~iiiivlv~~~fil~~ 94 (418)
+.+.|++.++.+++++.++
T Consensus 9 p~wiIi~s~l~GLllL~li 27 (42)
T 2k1a_A 9 PIWWVLVGVLGGLLLLTIL 27 (42)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3445555555554444433
No 200
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=20.60 E-value=59 Score=28.72 Aligned_cols=43 Identities=19% Similarity=0.542 Sum_probs=30.6
Q ss_pred CCcccccccccccCCCceEecC--CCCccccchhHHHHHhc----------CCCCCCcc
Q 014794 150 GALECAVCLSEFEDDETLRLLP--KCDHVFHPHCIDVWLAS----------HVTCPVCR 196 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp--~C~H~FH~~CI~~WL~~----------~~tCP~CR 196 (418)
.+..|.||-+. ..+.... .|...|+..||+.++.. .-.|=+|.
T Consensus 78 ~~~yC~wC~~G----g~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~ 132 (159)
T 3a1b_A 78 YQSYCTICCGG----REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCG 132 (159)
T ss_dssp SBSSCTTTSCC----SEEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTC
T ss_pred CcceeeEecCC----CeEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecC
Confidence 56789999853 3455544 58899999999998742 33577774
No 201
>2cuq_A Four and A half LIM domains 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.39.1.3 g.39.1.3
Probab=20.55 E-value=69 Score=23.66 Aligned_cols=38 Identities=26% Similarity=0.631 Sum_probs=28.1
Q ss_pred CcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccC
Q 014794 151 ALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLT 200 (418)
Q Consensus 151 ~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~ 200 (418)
...|+.|-+.+... .+ . .-+..||.+| .+|-.|..+|.
T Consensus 15 ~~~C~~C~~~I~~~-~v--~-a~~~~~H~~C--------F~C~~C~~~L~ 52 (80)
T 2cuq_A 15 APRCARCSKTLTQG-GV--T-YRDQPWHREC--------LVCTGCQTPLA 52 (80)
T ss_dssp SCCCTTTCCCCCSC-CE--E-SSSSEECTTT--------CBCSSSCCBCT
T ss_pred CCcCCCCCCEecCc-EE--E-ECCchhhhhh--------CCcccCCCcCC
Confidence 35799999988753 32 2 2678999888 46889988885
No 202
>1b8t_A Protein (CRP1); LIM domain, muscle differentiation, contractIle; NMR {Gallus gallus} SCOP: g.39.1.3 g.39.1.3 g.39.1.3 g.39.1.3 PDB: 1ibi_A 1qli_A 1cxx_A 1ctl_A 2o13_A
Probab=20.49 E-value=65 Score=28.36 Aligned_cols=41 Identities=22% Similarity=0.499 Sum_probs=31.1
Q ss_pred CCcccccccccccCCCceEecCCCCccccchhHHHHHhcCCCCCCcccccCC
Q 014794 150 GALECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLASHVTCPVCRANLTP 201 (418)
Q Consensus 150 ~~~~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~~~~tCP~CR~~l~~ 201 (418)
+...|+.|-..+.+.+.+.. -+..||.+| .+|-.|...|..
T Consensus 114 ~~~~C~~C~~~I~~~~~v~a---~~~~~H~~C--------F~C~~C~~~L~~ 154 (192)
T 1b8t_A 114 GSDGCPRCGQAVYAAEKVIG---AGKSWHKSC--------FRCAKCGKSLES 154 (192)
T ss_dssp CCEECTTTSCEECSSSCEEE---TTEEECTTT--------CBCTTTCCBCCS
T ss_pred CCCcCCCCCCEecCcEEEec---CCCccchhc--------CCccccCCCCCC
Confidence 34579999999887666643 578899888 568889888754
No 203
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=20.46 E-value=2.5e+02 Score=20.33 Aligned_cols=31 Identities=6% Similarity=0.236 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHHHHHHHHHH-HHHHhccccCc
Q 014794 76 PSMAIIILVLISTFFIVAMF-SIYVRHCSDSR 106 (418)
Q Consensus 76 ~s~~iiiivlv~~~fil~~~-~i~~r~c~~~~ 106 (418)
+.|.|++.++.+++++.++. ..|...+.+|.
T Consensus 8 p~WiIi~svl~GLLLL~Lii~~LwK~GFFKR~ 39 (54)
T 2l8s_A 8 PLWVILLSAFAGLLLLMLLILALWKIGFFKRP 39 (54)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHcCcccCC
Confidence 34555555555554443333 33333444443
No 204
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=20.40 E-value=22 Score=36.49 Aligned_cols=48 Identities=19% Similarity=0.391 Sum_probs=32.5
Q ss_pred ccccccccccCCCceEecCCCCccccchhHHHHHh-----cCCCCCCcccccC
Q 014794 153 ECAVCLSEFEDDETLRLLPKCDHVFHPHCIDVWLA-----SHVTCPVCRANLT 200 (418)
Q Consensus 153 ~CaICl~~f~~~~~~r~lp~C~H~FH~~CI~~WL~-----~~~tCP~CR~~l~ 200 (418)
.++||...+.++...+....|.--||..|+.---. ....||.|+....
T Consensus 6 ~yCiC~~~~d~~~~MIqCD~C~~WfH~~CVgi~~~~~~~~~~y~C~~C~~~~~ 58 (447)
T 3kv4_A 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNCEVLHG 58 (447)
T ss_dssp EETTTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTEEECCCHHHHHHHC
T ss_pred eEEeCCCcCCCCCCeEEcCCCCcccccccCCcCcccccCCCEEECCCCccccC
Confidence 45689887654444445556999999999853211 3568999976543
No 205
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=20.23 E-value=52 Score=26.84 Aligned_cols=11 Identities=27% Similarity=0.582 Sum_probs=4.9
Q ss_pred ccccccccccC
Q 014794 153 ECAVCLSEFED 163 (418)
Q Consensus 153 ~CaICl~~f~~ 163 (418)
.|+.|-..+..
T Consensus 68 ~C~~C~~~I~~ 78 (131)
T 2xjy_A 68 LCASCDKRIRA 78 (131)
T ss_dssp ECTTTCCEECT
T ss_pred ChhhcCCccCc
Confidence 34444444443
Done!