Query 014795
Match_columns 418
No_of_seqs 378 out of 2184
Neff 6.3
Searched_HMMs 46136
Date Fri Mar 29 08:35:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014795.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/014795hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02370 acyl-ACP thioesterase 100.0 1E-120 2E-125 929.8 45.1 418 1-418 1-419 (419)
2 PF12590 Acyl-thio_N: Acyl-ATP 100.0 6E-65 1.3E-69 429.0 9.0 124 1-125 1-129 (129)
3 PF01643 Acyl-ACP_TE: Acyl-ACP 100.0 2.9E-52 6.3E-57 405.7 27.2 259 136-401 1-261 (261)
4 COG3884 FatA Acyl-ACP thioeste 100.0 1.1E-33 2.4E-38 264.1 17.9 241 138-403 3-243 (250)
5 PRK10800 acyl-CoA thioesterase 99.9 4E-26 8.7E-31 198.7 18.5 128 138-272 2-129 (130)
6 TIGR02799 thio_ybgC tol-pal sy 99.9 1.9E-24 4.2E-29 186.0 16.5 124 139-270 1-125 (126)
7 COG0824 FcbC Predicted thioest 99.9 6.9E-24 1.5E-28 187.8 17.9 132 136-275 3-134 (137)
8 TIGR00051 acyl-CoA thioester h 99.9 1.7E-23 3.7E-28 176.9 16.0 117 142-265 1-117 (117)
9 PF13279 4HBT_2: Thioesterase- 99.9 1.6E-20 3.5E-25 160.6 17.3 119 145-272 1-121 (121)
10 PRK07531 bifunctional 3-hydrox 99.8 2E-20 4.3E-25 197.6 18.0 135 136-278 343-477 (495)
11 COG0824 FcbC Predicted thioest 99.8 3.7E-18 8.1E-23 151.2 12.7 107 301-416 6-126 (137)
12 PRK10800 acyl-CoA thioesterase 99.7 1.8E-17 4E-22 144.2 12.8 107 302-416 4-124 (130)
13 cd00586 4HBT 4-hydroxybenzoyl- 99.7 2.2E-16 4.8E-21 129.4 15.2 110 139-255 1-110 (110)
14 TIGR02799 thio_ybgC tol-pal sy 99.7 4.9E-16 1.1E-20 133.6 12.1 105 303-416 3-122 (126)
15 TIGR00051 acyl-CoA thioester h 99.7 1.1E-15 2.3E-20 129.1 12.6 103 304-414 1-117 (117)
16 PF13279 4HBT_2: Thioesterase- 99.6 2E-15 4.2E-20 129.1 10.9 99 307-415 1-115 (121)
17 PRK07531 bifunctional 3-hydrox 99.4 8.1E-13 1.8E-17 139.9 12.8 109 300-416 345-466 (495)
18 cd00586 4HBT 4-hydroxybenzoyl- 99.4 3.2E-12 6.9E-17 104.6 12.1 95 303-403 3-110 (110)
19 cd03442 BFIT_BACH Brown fat-in 99.3 7E-11 1.5E-15 100.3 15.8 113 137-265 6-123 (123)
20 cd03440 hot_dog The hotdog fol 99.0 2.8E-08 6.1E-13 76.1 13.7 97 141-251 3-99 (100)
21 cd03442 BFIT_BACH Brown fat-in 98.9 4.5E-08 9.8E-13 82.9 13.7 97 301-404 8-115 (123)
22 PF03061 4HBT: Thioesterase su 98.8 6.1E-08 1.3E-12 75.8 11.7 79 153-245 1-79 (79)
23 cd03440 hot_dog The hotdog fol 98.7 2.5E-07 5.5E-12 70.7 11.3 90 303-399 3-99 (100)
24 PLN02370 acyl-ACP thioesterase 98.7 2.4E-07 5.1E-12 96.1 13.1 109 301-416 140-268 (419)
25 PF03061 4HBT: Thioesterase su 98.6 2.6E-07 5.6E-12 72.2 9.2 72 315-393 1-79 (79)
26 cd03443 PaaI_thioesterase PaaI 98.6 2.1E-06 4.6E-11 71.7 14.5 102 136-252 11-112 (113)
27 PF01643 Acyl-ACP_TE: Acyl-ACP 98.6 2.5E-07 5.3E-12 90.4 10.2 96 136-251 163-259 (261)
28 PLN02647 acyl-CoA thioesterase 98.5 0.00015 3.3E-09 75.8 28.4 254 142-404 97-403 (437)
29 cd03443 PaaI_thioesterase PaaI 98.3 1.1E-05 2.3E-10 67.4 12.6 93 300-400 13-112 (113)
30 PRK10694 acyl-CoA esterase; Pr 98.3 2.8E-05 6.1E-10 68.7 15.3 111 140-266 13-131 (133)
31 COG1607 Acyl-CoA hydrolase [Li 97.8 0.001 2.2E-08 60.4 15.3 113 141-268 16-132 (157)
32 COG3884 FatA Acyl-ACP thioeste 97.6 0.00018 3.9E-09 68.6 7.8 88 138-251 152-239 (250)
33 TIGR00369 unchar_dom_1 unchara 97.6 0.0027 5.9E-08 54.0 14.4 98 140-252 19-116 (117)
34 PRK10694 acyl-CoA esterase; Pr 97.5 0.0024 5.2E-08 56.5 13.0 107 302-416 13-132 (133)
35 TIGR02286 PaaD phenylacetic ac 97.3 0.0084 1.8E-07 50.9 13.9 96 141-253 18-113 (114)
36 PRK10293 acyl-CoA esterase; Pr 96.9 0.041 8.9E-07 48.7 14.6 100 140-254 37-136 (136)
37 PRK11688 hypothetical protein; 96.9 0.011 2.3E-07 53.3 10.9 126 265-400 6-152 (154)
38 COG5496 Predicted thioesterase 96.7 0.073 1.6E-06 46.5 13.9 109 134-257 2-117 (130)
39 PRK10254 thioesterase; Provisi 96.7 0.11 2.4E-06 46.1 15.6 100 140-254 37-136 (137)
40 TIGR02286 PaaD phenylacetic ac 96.7 0.045 9.7E-07 46.4 12.5 96 300-401 15-113 (114)
41 COG1607 Acyl-CoA hydrolase [Li 96.6 0.087 1.9E-06 48.0 14.0 107 302-416 15-131 (157)
42 PRK11688 hypothetical protein; 96.5 0.092 2E-06 47.2 14.1 111 140-253 40-153 (154)
43 TIGR00369 unchar_dom_1 unchara 96.3 0.077 1.7E-06 45.0 11.7 94 300-400 17-116 (117)
44 PLN02864 enoyl-CoA hydratase 96.3 0.39 8.5E-06 48.4 18.5 60 196-255 94-157 (310)
45 KOG3328 HGG motif-containing t 96.2 0.055 1.2E-06 48.6 10.6 102 139-254 39-140 (148)
46 COG2050 PaaI HGG motif-contain 96.1 0.25 5.4E-06 43.6 14.1 104 139-256 36-139 (141)
47 PF13622 4HBT_3: Thioesterase- 95.9 1.6 3.6E-05 41.7 20.8 190 196-398 34-252 (255)
48 cd03449 R_hydratase (R)-hydrat 95.8 0.13 2.9E-06 43.6 10.7 57 194-251 68-126 (128)
49 PLN02322 acyl-CoA thioesterase 95.6 0.67 1.5E-05 42.1 15.1 102 140-255 29-135 (154)
50 cd03449 R_hydratase (R)-hydrat 94.6 0.29 6.2E-06 41.5 9.2 56 340-399 71-126 (128)
51 KOG4366 Predicted thioesterase 94.1 0.024 5.2E-07 52.6 1.5 103 146-255 58-161 (213)
52 COG4109 Predicted transcriptio 94.1 0.36 7.9E-06 49.2 9.9 99 136-251 330-428 (432)
53 cd03453 SAV4209_like SAV4209_l 93.9 0.64 1.4E-05 40.0 10.0 59 338-398 67-125 (127)
54 PF14539 DUF4442: Domain of un 93.8 0.93 2E-05 39.7 11.1 99 138-252 30-131 (132)
55 cd01288 FabZ FabZ is a 17kD be 93.7 2.1 4.4E-05 36.4 12.9 86 156-253 45-130 (131)
56 PLN02647 acyl-CoA thioesterase 93.7 2.1 4.5E-05 45.3 15.2 116 138-267 290-415 (437)
57 cd03455 SAV4209 SAV4209 is a S 93.6 0.57 1.2E-05 40.0 9.1 55 196-251 67-122 (123)
58 PRK10293 acyl-CoA esterase; Pr 93.6 2.1 4.6E-05 37.8 12.9 95 299-401 34-135 (136)
59 PRK10254 thioesterase; Provisi 93.4 2.7 5.8E-05 37.3 13.3 96 299-401 34-135 (137)
60 PRK13691 (3R)-hydroxyacyl-ACP 93.1 1.2 2.6E-05 40.8 11.0 61 197-258 85-149 (166)
61 PF14539 DUF4442: Domain of un 93.0 1.6 3.4E-05 38.2 11.0 95 300-400 30-131 (132)
62 cd00556 Thioesterase_II Thioes 92.9 0.62 1.3E-05 37.5 8.0 58 194-252 41-98 (99)
63 cd03455 SAV4209 SAV4209 is a S 92.9 1.1 2.4E-05 38.2 9.8 55 339-398 67-121 (123)
64 KOG4366 Predicted thioesterase 92.8 0.018 4E-07 53.3 -1.4 90 309-405 59-163 (213)
65 cd03447 FAS_MaoC FAS_MaoC, the 92.4 1.6 3.4E-05 38.0 10.2 53 197-250 69-122 (126)
66 cd03441 R_hydratase_like (R)-h 92.2 1.5 3.2E-05 36.9 9.6 56 194-250 66-125 (127)
67 cd03446 MaoC_like MoaC_like 92.1 1.1 2.3E-05 38.9 8.9 55 345-399 84-138 (140)
68 PRK13692 (3R)-hydroxyacyl-ACP 92.0 2 4.3E-05 39.0 10.8 60 199-259 87-150 (159)
69 PRK00006 fabZ (3R)-hydroxymyri 92.0 8 0.00017 33.9 16.4 86 156-255 60-146 (147)
70 cd00493 FabA_FabZ FabA/Z, beta 91.9 5.7 0.00012 33.5 13.1 86 153-248 41-126 (131)
71 PRK13692 (3R)-hydroxyacyl-ACP 91.8 1.5 3.3E-05 39.7 9.9 58 343-402 88-145 (159)
72 TIGR02447 yiiD_Cterm thioester 91.7 7.3 0.00016 34.3 13.8 100 140-254 25-137 (138)
73 cd03453 SAV4209_like SAV4209_l 91.6 1.5 3.3E-05 37.7 9.1 52 198-250 70-125 (127)
74 PRK13691 (3R)-hydroxyacyl-ACP 91.5 1.5 3.3E-05 40.1 9.6 61 343-405 88-148 (166)
75 cd03454 YdeM YdeM is a Bacillu 91.4 1.1 2.3E-05 39.1 8.1 51 201-252 81-138 (140)
76 cd03446 MaoC_like MoaC_like 91.2 1.3 2.8E-05 38.3 8.4 51 201-252 83-139 (140)
77 cd03441 R_hydratase_like (R)-h 91.2 3.1 6.7E-05 34.8 10.5 58 339-398 68-125 (127)
78 cd03447 FAS_MaoC FAS_MaoC, the 90.9 2.1 4.6E-05 37.2 9.4 54 340-399 69-123 (126)
79 cd03452 MaoC_C MaoC_C The C-t 90.7 1.4 3E-05 38.9 8.2 58 344-401 81-138 (142)
80 cd03451 FkbR2 FkbR2 is a Strep 90.3 1.6 3.4E-05 38.1 8.2 55 198-253 81-142 (146)
81 PLN02322 acyl-CoA thioesterase 90.0 8.8 0.00019 34.9 12.9 98 299-402 26-134 (154)
82 PRK04424 fatty acid biosynthes 89.4 4.3 9.4E-05 37.7 10.7 59 193-253 123-181 (185)
83 cd03451 FkbR2 FkbR2 is a Strep 88.8 2.6 5.6E-05 36.7 8.4 58 344-401 84-142 (146)
84 PRK00006 fabZ (3R)-hydroxymyri 88.5 3.3 7.1E-05 36.4 8.9 97 300-403 36-146 (147)
85 PF13452 MaoC_dehydrat_N: N-te 88.3 2.4 5.2E-05 36.4 7.7 52 194-246 73-131 (132)
86 COG2050 PaaI HGG motif-contain 87.9 12 0.00025 32.8 12.0 97 300-404 35-139 (141)
87 TIGR01750 fabZ beta-hydroxyacy 87.0 19 0.00042 31.1 13.8 86 156-252 53-139 (140)
88 cd03452 MaoC_C MaoC_C The C-t 86.3 4 8.7E-05 35.9 8.1 51 201-252 81-137 (142)
89 PRK08190 bifunctional enoyl-Co 86.0 5.9 0.00013 42.2 10.6 66 195-261 82-149 (466)
90 cd01288 FabZ FabZ is a 17kD be 84.7 5.2 0.00011 33.9 7.9 52 342-400 78-129 (131)
91 cd03454 YdeM YdeM is a Bacillu 84.4 4.7 0.0001 34.9 7.6 56 344-399 81-137 (140)
92 PF13452 MaoC_dehydrat_N: N-te 83.8 4.2 9.2E-05 34.8 7.0 54 341-394 77-131 (132)
93 cd00556 Thioesterase_II Thioes 83.0 9.6 0.00021 30.4 8.4 55 339-399 43-97 (99)
94 PRK04424 fatty acid biosynthes 82.5 9.8 0.00021 35.3 9.3 54 341-401 128-181 (185)
95 cd03445 Thioesterase_II_repeat 82.5 13 0.00027 30.6 9.0 54 196-251 39-92 (94)
96 KOG3328 HGG motif-containing t 82.3 21 0.00045 32.3 10.7 96 300-401 38-139 (148)
97 TIGR01750 fabZ beta-hydroxyacy 80.0 11 0.00025 32.6 8.4 94 300-400 29-139 (140)
98 PRK08190 bifunctional enoyl-Co 79.3 11 0.00023 40.2 9.4 58 341-402 85-142 (466)
99 PF07977 FabA: FabA-like domai 75.5 53 0.0012 28.4 12.1 102 139-248 27-138 (138)
100 COG4109 Predicted transcriptio 74.2 13 0.00028 38.3 7.8 88 304-398 336-427 (432)
101 PLN02864 enoyl-CoA hydratase 72.9 28 0.0006 35.1 9.9 67 342-410 97-164 (310)
102 PF13622 4HBT_3: Thioesterase- 71.7 51 0.0011 31.3 11.1 59 339-405 34-92 (255)
103 TIGR02447 yiiD_Cterm thioester 68.1 83 0.0018 27.5 11.1 95 299-402 22-137 (138)
104 COG2030 MaoC Acyl dehydratase 67.1 35 0.00077 30.7 8.4 61 340-402 95-155 (159)
105 TIGR00189 tesB acyl-CoA thioes 66.7 21 0.00046 34.5 7.5 55 196-252 44-98 (271)
106 cd03448 HDE_HSD HDE_HSD The R 65.4 29 0.00062 29.9 7.2 47 340-396 71-117 (122)
107 PF03756 AfsA: A-factor biosyn 65.0 90 0.0019 26.8 12.3 59 193-253 69-132 (132)
108 cd01289 FabA_like Domain of un 63.2 1E+02 0.0023 26.9 12.5 88 154-251 45-134 (138)
109 PF03756 AfsA: A-factor biosyn 61.9 1E+02 0.0022 26.4 10.1 61 339-401 72-132 (132)
110 PRK13188 bifunctional UDP-3-O- 60.9 91 0.002 33.4 11.3 60 194-255 401-461 (464)
111 COG2030 MaoC Acyl dehydratase 58.7 70 0.0015 28.7 8.8 60 194-254 92-155 (159)
112 COG0764 FabA 3-hydroxymyristoy 58.5 67 0.0015 28.9 8.5 57 341-403 89-145 (147)
113 TIGR02278 PaaN-DH phenylacetic 57.2 36 0.00077 38.0 7.9 56 344-399 604-659 (663)
114 cd03448 HDE_HSD HDE_HSD The R 56.4 71 0.0015 27.4 8.1 48 196-248 70-117 (122)
115 PRK11563 bifunctional aldehyde 56.1 33 0.00073 38.2 7.4 55 345-399 617-671 (675)
116 cd03445 Thioesterase_II_repeat 54.9 1.2E+02 0.0025 24.8 10.5 54 339-399 39-92 (94)
117 cd03444 Thioesterase_II_repeat 54.6 79 0.0017 26.2 7.9 57 195-252 47-103 (104)
118 PF01575 MaoC_dehydratas: MaoC 54.0 28 0.00062 29.5 5.2 35 194-228 74-108 (122)
119 cd03450 NodN NodN (nodulation 50.8 1.5E+02 0.0033 26.4 9.5 30 195-224 84-113 (149)
120 cd01287 FabA FabA, beta-hydrox 48.3 2E+02 0.0044 25.7 12.8 93 153-254 49-147 (150)
121 PRK13188 bifunctional UDP-3-O- 47.4 1.1E+02 0.0023 32.9 9.2 98 300-403 349-461 (464)
122 PF07977 FabA: FabA-like domai 47.1 84 0.0018 27.2 7.1 92 301-396 27-138 (138)
123 COG0764 FabA 3-hydroxymyristoy 46.0 2.3E+02 0.0049 25.5 12.5 62 194-256 85-146 (147)
124 PRK10526 acyl-CoA thioesterase 44.9 3.2E+02 0.0069 27.0 19.2 55 196-252 55-109 (286)
125 PRK11563 bifunctional aldehyde 41.3 84 0.0018 35.1 7.6 49 202-251 617-671 (675)
126 TIGR02278 PaaN-DH phenylacetic 41.3 79 0.0017 35.3 7.4 50 201-251 604-659 (663)
127 TIGR00189 tesB acyl-CoA thioes 39.6 3E+02 0.0066 26.4 10.5 56 338-400 43-98 (271)
128 cd00493 FabA_FabZ FabA/Z, beta 38.4 2.3E+02 0.005 23.5 13.0 89 302-397 22-127 (131)
129 cd03450 NodN NodN (nodulation 35.6 1.9E+02 0.0042 25.7 7.7 54 343-398 89-144 (149)
130 PLN02868 acyl-CoA thioesterase 35.5 5.2E+02 0.011 26.8 18.5 54 197-252 182-235 (413)
131 COG1946 TesB Acyl-CoA thioeste 34.7 4.9E+02 0.011 26.2 14.4 199 196-402 55-283 (289)
132 PF02551 Acyl_CoA_thio: Acyl-C 34.2 2.4E+02 0.0052 25.1 7.8 53 198-251 77-130 (131)
133 cd01289 FabA_like Domain of un 34.1 2.1E+02 0.0044 25.0 7.6 78 316-399 45-134 (138)
134 PRK13693 (3R)-hydroxyacyl-ACP 33.0 3.4E+02 0.0073 23.8 9.5 52 199-251 81-139 (142)
135 cd01287 FabA FabA, beta-hydrox 31.2 2.6E+02 0.0056 25.0 7.8 53 343-398 90-143 (150)
136 PF11456 DUF3019: Protein of u 29.3 1.4E+02 0.003 25.2 5.3 35 231-265 65-99 (102)
137 PRK13693 (3R)-hydroxyacyl-ACP 28.7 4E+02 0.0087 23.3 10.3 55 340-398 79-138 (142)
138 COG1946 TesB Acyl-CoA thioeste 28.5 6.2E+02 0.014 25.5 11.7 136 99-254 147-283 (289)
139 PF01575 MaoC_dehydratas: MaoC 27.8 91 0.002 26.3 4.1 28 339-366 76-103 (122)
140 COG3777 Uncharacterized conser 27.0 1.9E+02 0.0041 28.6 6.4 172 192-399 76-273 (273)
141 PF09500 YiiD_Cterm: Putative 25.8 4.9E+02 0.011 23.3 12.8 99 139-254 30-143 (144)
142 PRK10526 acyl-CoA thioesterase 25.7 6.5E+02 0.014 24.8 10.4 57 338-401 54-110 (286)
143 cd03444 Thioesterase_II_repeat 20.6 4.9E+02 0.011 21.4 7.9 74 319-398 17-101 (104)
144 PHA02582 10 baseplate wedge su 20.2 1.8E+02 0.004 31.7 5.3 72 193-265 218-292 (604)
No 1
>PLN02370 acyl-ACP thioesterase
Probab=100.00 E-value=9.8e-121 Score=929.76 Aligned_cols=418 Identities=81% Similarity=1.263 Sum_probs=386.1
Q ss_pred CccccccccccccCCCCCCCcccccCCCCCCcCCccccCC-CCceeeeccccCCCcccCcceeeccCcccccCCCCCCCC
Q 014795 1 MVATAAASAFFPVSSPSGDSVAKTKNLGSANLGGIKSKSS-SGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDISTSS 79 (418)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (418)
|||++|+|||||||+|++++++.++|.+++|++|||+|++ +|||||||||||+|||||++|+|+++++++|++|++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (419)
T PLN02370 1 MVATAATSSFFPVPSPSGDAKAKKFGSGSASLGGIKSKSASSGALQVKANAQAPPKINGSPVGLTGSVEIVKTDEDVVSS 80 (419)
T ss_pred CchhhhhcccccCCCCCCCcccccCCCCcccccccccCCCCCCceeeeccccCCCcccCceeecccccccccccccCCCC
Confidence 9999999999999999999987788889999999999998 899999999999999999999999999999999997669
Q ss_pred CCcccccccCCChHHHHHHHHHHHHhhhhhhhcccCCCCCCCcccccccCCccccCCeeEEEEEEeecCccCCCCCcCHH
Q 014795 80 PPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIE 159 (418)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~VR~~D~D~~Ghv~~~ 159 (418)
|||||||||||||||||||||||||||||||||||||++|||||+||||+|+|+||+++|+++|+|||||||.+|++++.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~f~Ir~yEvD~~g~lsl~ 160 (419)
T PLN02370 81 PAPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLIDPFGIGRIVQDGLVFRQNFSIRSYEIGADRTASIE 160 (419)
T ss_pred CCCcchhhcCCcHHHHHHHHHHHHHhhhhhhhhhcccCCCCcccccccccCceeccCcEEEEEEEEeeEEECCCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECC
Q 014795 160 TLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAK 239 (418)
Q Consensus 160 ~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~ 239 (418)
.++|||||++.+|+..+|++++||+...+|.+.|++|||++++|+|+|+|+|||+|+|+||+.+++++++.|+|.|+|.+
T Consensus 161 ~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~Twv~~~~k~~~~Rdf~I~D~~ 240 (419)
T PLN02370 161 TLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVDTWVSASGKNGMRRDWLVRDCK 240 (419)
T ss_pred HHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEEEEEeeCCCCEEEEEEEEEECC
Confidence 99999999999999999998888987678999999999999999999999999999999999999999999999999965
Q ss_pred CCcEEEEEEEEEEEEECCCCceeCCCHHHHHhhcccccCCCCCCccccCCCCCCCCCCcceeeeeeeccCCCCccccccc
Q 014795 240 TGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHVN 319 (418)
Q Consensus 240 ~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e~l~~y~~~~~p~~~~~~~kl~k~~~~~~~~~~~~i~VR~sDlD~ngHVN 319 (418)
+|+++++|.|+||+||++||||+|||+++++.+++|..+..+.+++..+|++++++.++++.+..++|||+|||.|||||
T Consensus 241 ~Ge~la~A~SvWV~mD~~TRRpvRIP~Evr~~i~~y~~~~~~~i~~~~~kl~~l~~~~~~~~~~~~~VRysDLD~NgHVN 320 (419)
T PLN02370 241 TGETLTRASSVWVMMNKLTRRLSKIPEEVRGEIEPYFLNSDPVVNEDSRKLPKLDDKTADYIRKGLTPRWSDLDVNQHVN 320 (419)
T ss_pred CCeEEEEEEEEEEEEECCCCcccCCCHHHHHhhhhcccccccccccccccCCccccccccceeeeeeecHHHCcccCccc
Confidence 79999999999999999999999999999999999987766666655778888876444456677999999999999999
Q ss_pred hhhHHHHHHHhccHhhhhccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 320 NVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 320 N~~Yl~w~~e~~~~e~l~~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
|++|++|++|++|.+++++|.+++++|+|++||++||.|++.+......+|...++....++|.++.++|+++|+++++|
T Consensus 321 NvkYi~Wild~lP~e~l~~~~l~~i~I~Y~kE~~~gd~V~s~~~~~~~~~~~~~~~~~~~~~h~~~~~dG~e~a~a~t~W 400 (419)
T PLN02370 321 NVKYIGWILESAPPPIMESHELAAITLEYRRECGRDSVLQSLTAVSGTGIGNLGTAGDVECQHLLRLEDGAEIVRGRTEW 400 (419)
T ss_pred cHHHHHHHHhhCchhhhhcceEEEEEEEEcccCCCCCEEEEEEeecccccccccCCCcceEEEEEEcCCCeEEEEEEEEE
Confidence 99999999999999999999999999999999999999999887543222211122335578888878999999999999
Q ss_pred EEecCCCCCCccCCCCCCC
Q 014795 400 RPKDAHNFGNVGPIPAEST 418 (418)
Q Consensus 400 ~~~d~~~~~~~~~~~~~~~ 418 (418)
+++.++|+|++|+||||++
T Consensus 401 r~~~~~~~~~~~~~~~~~~ 419 (419)
T PLN02370 401 RPKHATNFGIMGQIPAESA 419 (419)
T ss_pred EECCccCCCccccccCCCC
Confidence 9999999999999999985
No 2
>PF12590 Acyl-thio_N: Acyl-ATP thioesterase; InterPro: IPR021113 This entry represents the N-terminal domain of acyl-ATP thioesterases from bacteria and eukaryotes. These proteins are typically between 120 and 131 amino acids in length. The plant acyl-acyl carrier protein (ACP) thioesterases (TEs) play an essential role in chain termination during de novo fatty acid synthesis [].; GO: 0016790 thiolester hydrolase activity
Probab=100.00 E-value=6e-65 Score=428.99 Aligned_cols=124 Identities=73% Similarity=1.036 Sum_probs=117.1
Q ss_pred CccccccccccccCCCCCCCcc--cccCC--CCCCcCCccccCC-CCceeeeccccCCCcccCcceeeccCcccccCCCC
Q 014795 1 MVATAAASAFFPVSSPSGDSVA--KTKNL--GSANLGGIKSKSS-SGSLQVKANAQAPSKINGTSVGLTTPAESLKNGDI 75 (418)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (418)
|||++|+|||||||++++++++ +++|+ +++|+||||+|++ +|||||||||||+|||||++|+|+++++.+|++|+
T Consensus 1 MvAtaAaSaFFpvps~~~~~~~~s~~~G~~p~sl~~rgik~k~~~sg~~qvKanaqA~pKiNG~~v~l~~~~~~~~~~~~ 80 (129)
T PF12590_consen 1 MVATAAASAFFPVPSPSPSPKASSGKLGNGPDSLDVRGIKAKSASSGGLQVKANAQAPPKINGSKVGLKTGSEGTKEDDS 80 (129)
T ss_pred ChhhhhhhhccCCCCCCCCCccccccCCCCCCcccccccccCcCCCCCeeeecCCcCCCcccCccccccccccccccccc
Confidence 9999999999999999999988 78888 6777789999999 99999999999999999999999998888877765
Q ss_pred CCCCCCcccccccCCChHHHHHHHHHHHHhhhhhhhcccCCCCCCCcccc
Q 014795 76 STSSPPPRTFINQLPDWSMLLAAITTIFLAAEKQWMMLDWKPRRSDMLVD 125 (418)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (418)
++||+|||||||||||||||||||||||||||||||||||+||||||+|
T Consensus 81 -~~s~~pRTFiNQLPDWSMLLAAITTIFlAAEKQW~mLDwKpkRPDML~D 129 (129)
T PF12590_consen 81 -SSSPAPRTFINQLPDWSMLLAAITTIFLAAEKQWTMLDWKPKRPDMLVD 129 (129)
T ss_pred -CCCCCchhHhhhCccHHHHHHHHHHHHHHhhhhhhhhcccCCCcccccC
Confidence 7899999999999999999999999999999999999999999999998
No 3
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=100.00 E-value=2.9e-52 Score=405.70 Aligned_cols=259 Identities=36% Similarity=0.691 Sum_probs=188.7
Q ss_pred CeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEE
Q 014795 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (418)
Q Consensus 136 ~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V 215 (418)
|.+|+++++|+++|||.+|++++..+++|||+++..|+..+|+..++||.+++|.+.|++|||++++|++.|+|++||+|
T Consensus 1 g~~y~~~~~v~~~e~d~~~~l~l~~l~~~~qe~a~~h~~~lG~~~~~~~~~~~l~~~~~~Wvl~r~~i~i~r~P~~~e~i 80 (261)
T PF01643_consen 1 GLVYEKEFTVRYYECDPNGRLKLSALLNYFQEAATEHAESLGFGMDYFGSTPELKKQGLAWVLSRYQIEIHRYPRWGEKI 80 (261)
T ss_dssp ---EEEEEE--GGGB-TTSBB-HHHHHHHHHHHHHHHHHHTT-SHHH------HHCTTEEEEEEEEEEEESS--BTT-EE
T ss_pred CceEEEEEEEcceeeCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccchhhhhHhhcCcEEEEEEEEEEEEecCCCCCEE
Confidence 57899999999999999999999999999999999999999985544444445899999999999999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCCHHHHHhhcccccCCCCCCccccCCCCCC--
Q 014795 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKL-- 293 (418)
Q Consensus 216 ~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e~l~~y~~~~~p~~~~~~~kl~k~-- 293 (418)
+|+||+++.+++++.|+|.|+|.++|+++++|+|.||+||++||||+|+|+++.+.+..+..+.. .+....+++++
T Consensus 81 ~i~Tw~~~~~~~~~~R~f~i~d~~~G~~l~~a~s~WvliD~~trr~~ri~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~ 158 (261)
T PF01643_consen 81 TIETWPSGFKRFFAYRDFEIYDAEDGELLARATSIWVLIDLETRRPVRIPEEIIEEYGPFFPDEL--PEEDIRKLPKIPK 158 (261)
T ss_dssp EEEEEEEEE-SSEEEEEEEEE--TTS-EEEEEEEEEEEEETTT-SEE---GGCTCCGGGGB------T-EESSS------
T ss_pred EEEEEeccCCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEhhhCCcccCCHHHHhhhhhhccccc--ccccccccccccc
Confidence 99999999999999999999994489999999999999999999999999988766643333321 11112333333
Q ss_pred CCCCcceeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhhccceEEEEEEEccCCCCCCeEEEEEEEeecccCccc
Q 014795 294 GDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLV 373 (418)
Q Consensus 294 ~~~~~~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~ 373 (418)
....+.....+++|||+|||.||||||++|++|++|++|.++++.+.+++++|.|++|+++||.|.+.+.+... .
T Consensus 159 ~~~~~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~~~~~~~~~~i~I~y~~E~~~gd~i~~~~~~~~~-----~ 233 (261)
T PF01643_consen 159 NPPEEPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEEFLEKYQIKSIDINYKKEIRYGDTITSYTEVEKD-----E 233 (261)
T ss_dssp ----TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HHHHCCEEEEEEEEEE-S--BTT-EEEEEEEEEEE-----C
T ss_pred cCChhhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcchhhccCCcEEEEEEEccccCCCCEEEEEEEEccc-----c
Confidence 22223445689999999999999999999999999999999999999999999999999999999999886541 1
Q ss_pred ccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 374 NLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 374 ~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
....+.+.|.|+.++|+++|+++|.|.+
T Consensus 234 ~~~~~~~~h~i~~~~g~~~~~~~~~W~~ 261 (261)
T PF01643_consen 234 EEDGLSTLHEIRNEDGEEVARARTEWQK 261 (261)
T ss_dssp CTTEEEEEEEEECT-TCEEEEEEEEEE-
T ss_pred cCCceEEEEEEEcCCCceEEEEEEEEcC
Confidence 1356789999999889999999999974
No 4
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=100.00 E-value=1.1e-33 Score=264.05 Aligned_cols=241 Identities=21% Similarity=0.318 Sum_probs=198.6
Q ss_pred eEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEE
Q 014795 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (418)
Q Consensus 138 ~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V 217 (418)
++.+.+.|.+++.|+.|++..+..+.+..++|..+...+|.+. ...+.+.++.|+|.++.|++.|+|.++|.|++
T Consensus 3 ~~k~~~~vP~~~~d~~g~i~~~~~l~l~~~i~~~Qsi~lg~~~-----~~~lee~~l~WiV~~~~i~~ir~pef~e~iti 77 (250)
T COG3884 3 VDKQNMPVPFYWPDAVGDIDITSRLRLDLQIRGIQSIGLGQLD-----VAGLEEYHLLWIVRRTEIDVIRPPEFGEMITI 77 (250)
T ss_pred chhhcCCCccchhhhcCCcchhhhhhhhhhhcceeecccchhh-----hhhHhhcCceEEEEEEEEEEeeccccCCcceE
Confidence 4556788899999999999999999999999977766665321 23578899999999999999999999999999
Q ss_pred EEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCCHHHHHhhcccccCCCCCCccccCCCCCCCCCC
Q 014795 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDST 297 (418)
Q Consensus 218 ~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e~l~~y~~~~~p~~~~~~~kl~k~~~~~ 297 (418)
+||+..+.+++++|+|.+.+ .|+.+..+.+.|++||.+||||.++++++...++.-...+.... ...+.+..+
T Consensus 78 ~t~~~s~~~ffcyrrf~~~~--~gg~Lie~~a~wilmn~dTrkp~ri~~d~la~~~~t~~~k~~r~---~~~l~~~~e-- 150 (250)
T COG3884 78 ETWCSSISNFFCYRRFRLDG--RGGGLIEIEAFWILMNRDTRKPARITDDLLAPFNLTTEKKRLRW---PKYLSSRLE-- 150 (250)
T ss_pred EEeeccccceEEEEEEEEec--CCCcEEEEEEEEEEEccccccceeccHHHhhhhcccchhheecc---ccccCcccc--
Confidence 99999999999999999998 58889999999999999999999999999876553222111111 111111111
Q ss_pred cceeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhhccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccce
Q 014795 298 ADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGS 377 (418)
Q Consensus 298 ~~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s 377 (418)
......+.||+.|||+||||||++|+.|++|.++.+++..+.+.++.++|.+|+.+|++|.+.+.+.. .+ +
T Consensus 151 -~s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~~~p~r~~l~y~keva~G~~iti~~e~~~--~~-----s- 221 (250)
T COG3884 151 -ASEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKLYGPLRLTLEYVKEVAPGEKITIVYEVHP--LE-----S- 221 (250)
T ss_pred -ccccccceeEEEeeccccccccceehHHHHHHHhhhhHhhcccceeEEEEEcccCCCCeEEEEEEEcc--cC-----c-
Confidence 23456899999999999999999999999999999999999999999999999999999999988866 32 1
Q ss_pred EEEEEEEEeCCCeEEEEEEEEEEEec
Q 014795 378 VECQHLLRLEEGAEVLRARTEWRPKD 403 (418)
Q Consensus 378 ~~~~h~i~~~dG~~va~a~t~w~~~d 403 (418)
.|.+.. ||.+.+.+-++|..+.
T Consensus 222 ---~~~f~~-d~~v~~lt~i~~d~iK 243 (250)
T COG3884 222 ---KHQFTS-DGQVNALTYIVGDEIK 243 (250)
T ss_pred ---eeeecC-CcceEEEEEEEehhhH
Confidence 344433 8999999999998754
No 5
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.94 E-value=4e-26 Score=198.74 Aligned_cols=128 Identities=17% Similarity=0.240 Sum_probs=118.7
Q ss_pred eEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEE
Q 014795 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (418)
Q Consensus 138 ~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V 217 (418)
+|..+++|||+|||++|||+|++|++|||+|+.+++..+|+ +. ..+.+.|++|++++++|+|.+|+++||+|+|
T Consensus 2 ~f~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a~~~~~~~~g~-----~~-~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v 75 (130)
T PRK10800 2 LFRWPVRVYYEDTDAGGVVYHASYVAFYERARTEMLRHHHF-----SQ-QALLAERVAFVVRKMTVEYYAPARLDDMLEV 75 (130)
T ss_pred ceEEEEEEeehhcCCCCeEehHHHHHHHHHHHHHHHHHcCC-----CH-HHHHhCCCEEEEEEEEEEEcCcccCCCEEEE
Confidence 57789999999999999999999999999999999999876 22 3466789999999999999999999999999
Q ss_pred EEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCCHHHHHhh
Q 014795 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEI 272 (418)
Q Consensus 218 ~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e~l 272 (418)
+||+.++++.++...|++++. +|+++++|.++||++|.++|||++||+++++.+
T Consensus 76 ~t~v~~~~~~s~~~~~~i~~~-~g~~~a~~~~~~v~~d~~~~r~~~iP~~l~~~~ 129 (130)
T PRK10800 76 QSEITSMRGTSLTFTQRIVNA-EGTLLNEAEVLIVCVDPLKMKPRALPKSIVAEF 129 (130)
T ss_pred EEEEEeeCcEEEEEEEEEEcC-CCeEEEEEEEEEEEEECCCCcCcCCCHHHHHhh
Confidence 999999999999999999984 899999999999999999999999999998765
No 6
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.92 E-value=1.9e-24 Score=185.98 Aligned_cols=124 Identities=18% Similarity=0.229 Sum_probs=114.6
Q ss_pred EEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHh-hCCcEEEEEEeEEEEeecCCCCCEEEE
Q 014795 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMA-KKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (418)
Q Consensus 139 f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~-~~gl~WVV~r~~Iey~r~p~~gD~V~V 217 (418)
|+.+++|||+|||++|||++++|++||++|+.+++.++|+. . ..+. +.|.+|++++++|+|.+|+++||+|.|
T Consensus 1 f~~~~~vr~~d~D~~Ghv~~~~y~~~~~~a~~~~~~~~g~~-----~-~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v 74 (126)
T TIGR02799 1 FRWPIRVYYEDTDAGGVVYHANYLKFMERARTEWLRALGFE-----Q-SALLEETGLVFVVRSMELDYLKPARLDDLLTV 74 (126)
T ss_pred CcceEEEEEeccCCCceEEechHHHHHHHHHHHHHHHcCCC-----H-HHHhhcCCcEEEEEEEEEEEcCcccCCCEEEE
Confidence 45689999999999999999999999999999999999872 2 3453 569999999999999999999999999
Q ss_pred EEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCCHHHHH
Q 014795 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQ 270 (418)
Q Consensus 218 ~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e 270 (418)
+||+.++++.++.+.|.|++ +|+++++|.++||++|.++|||+++|+++++
T Consensus 75 ~~~v~~~~~~~~~~~~~i~~--~g~~~a~~~~~~v~vd~~~~~~~~~p~~~~~ 125 (126)
T TIGR02799 75 TTRVVELKGASLVFAQEVRR--GDTLLCEATVEVACVDASDMRPRRLPAELRA 125 (126)
T ss_pred EEEEEecCceEEEEEEEEEe--CCEEEEEEEEEEEEEECCCCcCcCCCHHHhh
Confidence 99999999999999999995 6999999999999999999999999999875
No 7
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.92 E-value=6.9e-24 Score=187.78 Aligned_cols=132 Identities=20% Similarity=0.295 Sum_probs=122.2
Q ss_pred CeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEE
Q 014795 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (418)
Q Consensus 136 ~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V 215 (418)
...|..+++|||+|||++|||||++|+.|||+|++++++++|+ .. ..+.+.|+.|+|++++|+|++|.++||.+
T Consensus 3 ~~~~~~~~~V~~~d~D~~GhV~~a~Yl~~fE~ar~~~l~~~g~-----~~-~~~~~~~~~~~v~~~~i~y~~p~~~~d~l 76 (137)
T COG0824 3 SFPFSTPIRVRYEDTDAMGHVNNANYLVFFEEARTEFLRALGF-----DY-ADLEEGGIAFVVVEAEIDYLRPARLGDVL 76 (137)
T ss_pred CcceEEEEEEEhhhcCcccEEecchHHHHHHHHHHHHHHHcCC-----CH-HHHhhCCcEEEEEEEEeEECCCccCCCEE
Confidence 4568889999999999999999999999999999999999776 22 45777789999999999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCCHHHHHhhccc
Q 014795 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPY 275 (418)
Q Consensus 216 ~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e~l~~y 275 (418)
+|+||+.++++.++...|+|++. ++++++|.+++|++|.+++||+++|+++++.+..+
T Consensus 77 ~v~~~v~~~~~~s~~~~~~i~~~--~~l~a~~~~~~V~v~~~~~kp~~~P~~~~~~l~~~ 134 (137)
T COG0824 77 TVRTRVEELGGKSLTLGYEIVNE--DELLATGETTLVCVDLKTGKPVPLPPELREALEAL 134 (137)
T ss_pred EEEEEEEeecCeEEEEEEEEEeC--CEEEEEEEEEEEEEECCCCCcccCCHHHHHHHHHh
Confidence 99999999999999999999984 49999999999999999999999999999988754
No 8
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.91 E-value=1.7e-23 Score=176.94 Aligned_cols=117 Identities=13% Similarity=0.173 Sum_probs=108.0
Q ss_pred EEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEE
Q 014795 142 NFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWV 221 (418)
Q Consensus 142 ~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv 221 (418)
+++|||+|||++|||+++.|++|||+|+.+|++.+|+ +. ..+.+.+++|++++++++|++|+++||+|+|+||+
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a~~~~~~~~g~-----~~-~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~ 74 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERARTEFLRSLGF-----PQ-SVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQI 74 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHHHHHHHHHcCC-----CH-HHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEE
Confidence 3689999999999999999999999999999999876 22 45778899999999999999999999999999999
Q ss_pred EEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCC
Q 014795 222 SASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMP 265 (418)
Q Consensus 222 ~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP 265 (418)
.++++.++.+.|+|++. +|++++.+.++||++|+++||+++||
T Consensus 75 ~~~~~~s~~~~~~i~~~-~~~~~~~~~~~~v~~d~~~~r~~~ip 117 (117)
T TIGR00051 75 EELNGFSFVFSQEIFNE-DEALLKAATVIVVCVDPKKQKPVAIP 117 (117)
T ss_pred EecCcEEEEEEEEEEeC-CCcEEEeeEEEEEEEECCCCeEcCCC
Confidence 99999999999999984 78888888888999999999999997
No 9
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.86 E-value=1.6e-20 Score=160.64 Aligned_cols=119 Identities=20% Similarity=0.300 Sum_probs=100.4
Q ss_pred eecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEe
Q 014795 145 IRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (418)
Q Consensus 145 VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~ 224 (418)
|||+||| +|||||++|++||++|+.+++.+.|+. ..+...|+++++.+.+|+|++|.+++|+++|++++.++
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~ar~~~~~~~g~~-------~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~~ 72 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEEAREEFLEELGLY-------DELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEEI 72 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHHHHHHHHHHHTSC-------HHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEEE
T ss_pred CCHHHcc-CCeEcHHHHHHHHHHHHHHHHHhcchh-------hHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEEE
Confidence 7999999 999999999999999999999988861 45778899999999999999999999999999999999
Q ss_pred CCcEEEEEEEEEECCCCcE--EEEEEEEEEEEECCCCceeCCCHHHHHhh
Q 014795 225 GKNGMRRDWLIRNAKTGET--LTRATSLWVMMNKLTRRLSKMPDEVRQEI 272 (418)
Q Consensus 225 gk~~~~R~f~I~d~~~Gev--la~A~S~wV~iDl~TRRpvrIP~ev~e~l 272 (418)
++.++...|.|++.++|+. +|+|.+++|++|.++ |++++|++++++|
T Consensus 73 ~~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r~~~~P~~~~~~l 121 (121)
T PF13279_consen 73 GGKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-RSVPIPDELREAL 121 (121)
T ss_dssp ESSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-CE-B--HHHHHHH
T ss_pred CCcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-CcCCCCHHHHhcC
Confidence 9999999999998445655 999999999999999 6999999999865
No 10
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.85 E-value=2e-20 Score=197.62 Aligned_cols=135 Identities=10% Similarity=0.086 Sum_probs=123.0
Q ss_pred CeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEE
Q 014795 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (418)
Q Consensus 136 ~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V 215 (418)
..+.+.+++|+++|||++|||||.+|++||++|+.+|+..+|+ +. .....+.+|++++++|+|.+|+++||.|
T Consensus 343 ~~~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~Ar~~~~~~~G~-----~~--~~~~~~~~~vvv~~~i~y~rp~~~gD~v 415 (495)
T PRK07531 343 QPLRLVETKVPPAWVDYNGHMTEHRYLQVFGDTTDALLRLIGV-----DA--AYVAAGHSYYTVETHIRHLGEAKAGQAL 415 (495)
T ss_pred CceEEEeEEECHHHcCCCCeEcHHHHHHHHHHHHHHHHHHcCC-----CH--HHHhcCCcEEEEEEEEEEcccCCCCCEE
Confidence 4455789999999999999999999999999999999999886 22 2334589999999999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCCHHHHHhhcccccC
Q 014795 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMPDEVRQEIEPYFLN 278 (418)
Q Consensus 216 ~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP~ev~e~l~~y~~~ 278 (418)
+|+||+.++++.++.+.|+|++ .+|+++++|.++||++|+++||++++|+++++.++.+..+
T Consensus 416 ~I~t~v~~~~~~s~~~~~~i~~-~~g~l~A~g~~~~v~vD~~trr~~~iP~e~r~~l~~~~~~ 477 (495)
T PRK07531 416 HVETQLLSGDEKRLHLFHTLYD-AGGELIATAEHMLLHVDLKAGKAVPAPAAVLAALKPIAEA 477 (495)
T ss_pred EEEEEEEecCCcEEEEEEEEEC-CCCcEEEEEEEEEEEEECCCCccCCCCHHHHHHHHHHHHh
Confidence 9999999999999999999998 4899999999999999999999999999999999876544
No 11
>COG0824 FcbC Predicted thioesterase [General function prediction only]
Probab=99.77 E-value=3.7e-18 Score=151.16 Aligned_cols=107 Identities=24% Similarity=0.332 Sum_probs=93.4
Q ss_pred eeeeeeccCCCCccccccchhhHHHHHHHhccHhhhhc--------------cceEEEEEEEccCCCCCCeEEEEEEEee
Q 014795 301 VRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILES--------------HQLASVTLEYRRECGRDSVLQSLTAVSD 366 (418)
Q Consensus 301 ~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~--------------~~l~~~~I~Y~~E~~~gd~l~v~t~v~~ 366 (418)
...+++|||+|+|.+|||||++|+.|+ |.++.++++. ..+++++|+|++|+++||.+.+.+++.+
T Consensus 6 ~~~~~~V~~~d~D~~GhV~~a~Yl~~f-E~ar~~~l~~~g~~~~~~~~~~~~~~v~~~~i~y~~p~~~~d~l~v~~~v~~ 84 (137)
T COG0824 6 FSTPIRVRYEDTDAMGHVNNANYLVFF-EEARTEFLRALGFDYADLEEGGIAFVVVEAEIDYLRPARLGDVLTVRTRVEE 84 (137)
T ss_pred eEEEEEEEhhhcCcccEEecchHHHHH-HHHHHHHHHHcCCCHHHHhhCCcEEEEEEEEeEECCCccCCCEEEEEEEEEe
Confidence 467899999999999999999999998 4457777754 3489999999999999999999999998
Q ss_pred cccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 367 KDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 367 ~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
+| +.|+.+.|.|..++ +++|+|+++++++|.. -|...++|.+
T Consensus 85 --~~----~~s~~~~~~i~~~~-~l~a~~~~~~V~v~~~-~~kp~~~P~~ 126 (137)
T COG0824 85 --LG----GKSLTLGYEIVNED-ELLATGETTLVCVDLK-TGKPVPLPPE 126 (137)
T ss_pred --ec----CeEEEEEEEEEeCC-EEEEEEEEEEEEEECC-CCCcccCCHH
Confidence 66 68999999999875 9999999999999987 4666777753
No 12
>PRK10800 acyl-CoA thioesterase YbgC; Provisional
Probab=99.74 E-value=1.8e-17 Score=144.18 Aligned_cols=107 Identities=16% Similarity=0.194 Sum_probs=90.4
Q ss_pred eeeeeccCCCCccccccchhhHHHHHHHhccHhhhh--------------ccceEEEEEEEccCCCCCCeEEEEEEEeec
Q 014795 302 RRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE--------------SHQLASVTLEYRRECGRDSVLQSLTAVSDK 367 (418)
Q Consensus 302 ~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~--------------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~ 367 (418)
..+++|||+|+|.+|||||.+|++|++++ +.+++. ...+.+.+|+|++|+++||.|.+.+++.+
T Consensus 4 ~~~~~Vr~~d~D~~Ghv~~~~y~~~~e~a-~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~i~v~t~v~~- 81 (130)
T PRK10800 4 RWPVRVYYEDTDAGGVVYHASYVAFYERA-RTEMLRHHHFSQQALLAERVAFVVRKMTVEYYAPARLDDMLEVQSEITS- 81 (130)
T ss_pred EEEEEEeehhcCCCCeEehHHHHHHHHHH-HHHHHHHcCCCHHHHHhCCCEEEEEEEEEEEcCcccCCCEEEEEEEEEe-
Confidence 46799999999999999999999998666 333332 13488999999999999999999999998
Q ss_pred ccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 368 DIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 368 ~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
+| +.++++.+.+..++|+++|+|+++|+++|.+ .+...+||.+
T Consensus 82 -~~----~~s~~~~~~i~~~~g~~~a~~~~~~v~~d~~-~~r~~~iP~~ 124 (130)
T PRK10800 82 -MR----GTSLTFTQRIVNAEGTLLNEAEVLIVCVDPL-KMKPRALPKS 124 (130)
T ss_pred -eC----cEEEEEEEEEEcCCCeEEEEEEEEEEEEECC-CCcCcCCCHH
Confidence 66 5889999999877899999999999999987 3555677753
No 13
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.72 E-value=2.2e-16 Score=129.44 Aligned_cols=110 Identities=21% Similarity=0.239 Sum_probs=101.3
Q ss_pred EEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEE
Q 014795 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (418)
Q Consensus 139 f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~ 218 (418)
|..++.|+++|||.+||+++..|++|+++++..++...|+. ...+...+.+|++.+.+++|.+|+..||+|+|+
T Consensus 1 ~~~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~ 74 (110)
T cd00586 1 FTLEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLG------YDELEEQGLGLVVVELEIDYLRPLRLGDRLTVE 74 (110)
T ss_pred CcEEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCC------HHHHHhCCceEEEEEeEeeEcCccCCCCEEEEE
Confidence 45689999999999999999999999999999999998863 134567899999999999999999999999999
Q ss_pred EEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEE
Q 014795 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (418)
Q Consensus 219 Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iD 255 (418)
+|+.+.++.++.+.+.+++. +|++++++.+.|+++|
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~-~g~~~a~~~~~~~~~d 110 (110)
T cd00586 75 TRVLRLGRKSFTFEQEIFRE-DGELLATAETVLVCVD 110 (110)
T ss_pred EEEEecCcEEEEEEEEEECC-CCeEEEEEEEEEEEeC
Confidence 99999999999999999984 7999999999999987
No 14
>TIGR02799 thio_ybgC tol-pal system-associated acyl-CoA thioesterase. The tol-pal system consists of five critical genes. Inner membrane proteins TolQ and TolR convert protomotive force to energy that is transduced through TolA to an outer membrane complex of TolB and Pal. The system is known to be required to maintain outer membrane integrity. In a system with several homologous parts, ExbB and ExbD transduces energy through TonB to a variety of outer membrane proteins, many of which are siderophore receptors. The tol-pal system therefore may also be involved in transport. This family consists of a protein nearly always found in operons with the genes of the tol-pal system. The significance of this thioesterase to the tol-pal system is unclear, but either of two observations may be relevant. First, Pal, or peptidoglycan-associated lipoprotein, has a conserved N-terminal cleavage and acylation that makes it a lipoprotein. Second, the tol-pal system is implicated not only in the import o
Probab=99.67 E-value=4.9e-16 Score=133.58 Aligned_cols=105 Identities=20% Similarity=0.216 Sum_probs=87.4
Q ss_pred eeeeccCCCCccccccchhhHHHHHHHhccHhhhh-----------c----cceEEEEEEEccCCCCCCeEEEEEEEeec
Q 014795 303 RGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE-----------S----HQLASVTLEYRRECGRDSVLQSLTAVSDK 367 (418)
Q Consensus 303 ~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~-----------~----~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~ 367 (418)
.+++|||+|+|.+|||||++|+.|++++ +.++++ . ..+.+.+|+|++|+++||.|.+.+++..
T Consensus 3 ~~~~vr~~d~D~~Ghv~~~~y~~~~~~a-~~~~~~~~g~~~~~~~~~~~~~~vv~~~~i~y~~~~~~gd~v~v~~~v~~- 80 (126)
T TIGR02799 3 WPIRVYYEDTDAGGVVYHANYLKFMERA-RTEWLRALGFEQSALLEETGLVFVVRSMELDYLKPARLDDLLTVTTRVVE- 80 (126)
T ss_pred ceEEEEEeccCCCceEEechHHHHHHHH-HHHHHHHcCCCHHHHhhcCCcEEEEEEEEEEEcCcccCCCEEEEEEEEEe-
Confidence 4689999999999999999999998655 333322 1 2478999999999999999999999988
Q ss_pred ccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 368 DIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 368 ~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
+| +.++.+.+.+.. +|+++|+|.++|+++|.. -+...++|.+
T Consensus 81 -~~----~~~~~~~~~i~~-~g~~~a~~~~~~v~vd~~-~~~~~~~p~~ 122 (126)
T TIGR02799 81 -LK----GASLVFAQEVRR-GDTLLCEATVEVACVDAS-DMRPRRLPAE 122 (126)
T ss_pred -cC----ceEEEEEEEEEe-CCEEEEEEEEEEEEEECC-CCcCcCCCHH
Confidence 66 688999998884 799999999999999986 3556667653
No 15
>TIGR00051 acyl-CoA thioester hydrolase, YbgC/YbaW family. This model describes a subset of related acyl-CoA thioesterases that include several at least partially characterized proteins. YbgC is an acyl-CoA thioesterase associated with the Tol-Pal system. YbaW is part of the FadM regulon.
Probab=99.66 E-value=1.1e-15 Score=129.13 Aligned_cols=103 Identities=17% Similarity=0.211 Sum_probs=83.4
Q ss_pred eeeccCCCCccccccchhhHHHHHHHhccHhhh----------hc----cceEEEEEEEccCCCCCCeEEEEEEEeeccc
Q 014795 304 GLTPRWSDLDVNQHVNNVKYIGWILESAPQQIL----------ES----HQLASVTLEYRRECGRDSVLQSLTAVSDKDI 369 (418)
Q Consensus 304 ~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l----------~~----~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~i 369 (418)
+++|||+|+|.||||||+.|+.|++++ +.+++ .. ..+.+++|+|++|+++||.|.+.+++.. +
T Consensus 1 ~~~V~~~d~D~~G~v~~~~y~~~~~~a-~~~~~~~~g~~~~~~~~~~~~~~v~~~~i~y~~~~~~gd~v~v~~~~~~--~ 77 (117)
T TIGR00051 1 PVRVYYEDTDAQGIVYHANYLRYCERA-RTEFLRSLGFPQSVLRAEGVAFVVVNINIEYKKPARLDDVLEIRTQIEE--L 77 (117)
T ss_pred CEEEEEeccCCCcEEEehHHHHHHHHH-HHHHHHHcCCCHHHHHhCCCEEEEEEEEEEECCcccCCCEEEEEEEEEe--c
Confidence 378999999999999999999999776 32232 22 2589999999999999999999999988 6
Q ss_pred CcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCCCCCCccCCC
Q 014795 370 GNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIP 414 (418)
Q Consensus 370 G~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~~~~~~~~~~ 414 (418)
| +.++.+.|.+.+++|.+++.+.+.|+++|... +...+||
T Consensus 78 ~----~~s~~~~~~i~~~~~~~~~~~~~~~v~~d~~~-~r~~~ip 117 (117)
T TIGR00051 78 N----GFSFVFSQEIFNEDEALLKAATVIVVCVDPKK-QKPVAIP 117 (117)
T ss_pred C----cEEEEEEEEEEeCCCcEEEeeEEEEEEEECCC-CeEcCCC
Confidence 6 68899999998877888888888899998762 4344443
No 16
>PF13279 4HBT_2: Thioesterase-like superfamily; PDB: 2W3X_E 3CK1_A 2GF6_C 2NUJ_A 2HLJ_A 2XFL_B 2XEM_B 2OIW_B 2HX5_A 2FUJ_A ....
Probab=99.63 E-value=2e-15 Score=129.11 Aligned_cols=99 Identities=31% Similarity=0.422 Sum_probs=74.4
Q ss_pred ccCCCCccccccchhhHHHHHHHhccHhhhhc-------------cceEEEEEEEccCCCCCCeEEEEEEEeecccCccc
Q 014795 307 PRWSDLDVNQHVNNVKYIGWILESAPQQILES-------------HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLV 373 (418)
Q Consensus 307 VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~-------------~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~ 373 (418)
|||+|+| +|||||++|+.|+++ ++.+++.. ..+.+.+|+|++|+++||.+.+.+++.. +|
T Consensus 1 Vr~~D~D-~ghv~n~~Y~~~~e~-ar~~~~~~~g~~~~~~~~~~~~~v~~~~i~y~~~~~~~d~~~v~~~~~~--~~--- 73 (121)
T PF13279_consen 1 VRWSDTD-NGHVNNARYLRYFEE-AREEFLEELGLYDELQGQGIGFVVAESEIDYLRPLRFGDRLEVETRVEE--IG--- 73 (121)
T ss_dssp --GGGB--TSSB-HHHHHHHHHH-HHHHHHHHHTSCHHHTTTTEEEEEEEEEEEE-S--BTTSEEEEEEEEEE--EE---
T ss_pred CCHHHcc-CCeEcHHHHHHHHHH-HHHHHHHhcchhhHHHhcCceEEEEEEEEEEcccccCCCEEEEEEEEEE--EC---
Confidence 7999999 999999999999855 57777742 3489999999999999999999999987 55
Q ss_pred ccceEEEEEEEEe-CCCeE--EEEEEEEEEEecCCCCCCccCCCC
Q 014795 374 NLGSVECQHLLRL-EEGAE--VLRARTEWRPKDAHNFGNVGPIPA 415 (418)
Q Consensus 374 ~~~s~~~~h~i~~-~dG~~--va~a~t~w~~~d~~~~~~~~~~~~ 415 (418)
+.++.+.|.+.. .+|+. +|+|+++++++|.+. + ..++|.
T Consensus 74 -~~s~~~~~~i~~~~~g~~~~~a~~~~~~v~~d~~~-r-~~~~P~ 115 (121)
T PF13279_consen 74 -GKSFRFEQEIFRPADGKGELAATGRTVMVFVDYKT-R-SVPIPD 115 (121)
T ss_dssp -SSEEEEEEEEEECSTTEEEEEEEEEEEEEEEETTT-C-E-B--H
T ss_pred -CcEEEEEEEEEEcCCCceEEEEEEEEEEEEEeCCC-C-cCCCCH
Confidence 689999998876 35655 999999999998884 2 566664
No 17
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=99.43 E-value=8.1e-13 Score=139.93 Aligned_cols=109 Identities=16% Similarity=0.087 Sum_probs=91.0
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhhc-------------cceEEEEEEEccCCCCCCeEEEEEEEee
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILES-------------HQLASVTLEYRRECGRDSVLQSLTAVSD 366 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~-------------~~l~~~~I~Y~~E~~~gd~l~v~t~v~~ 366 (418)
....+++|++.|+|.||||||.+|++|++++ +.+++.. ..+.+++|+|++|+++||.|.+.+++..
T Consensus 345 ~~~~~~~V~~~~~D~~Ghvnn~~Yl~~~e~A-r~~~~~~~G~~~~~~~~~~~~vvv~~~i~y~rp~~~gD~v~I~t~v~~ 423 (495)
T PRK07531 345 LRLVETKVPPAWVDYNGHMTEHRYLQVFGDT-TDALLRLIGVDAAYVAAGHSYYTVETHIRHLGEAKAGQALHVETQLLS 423 (495)
T ss_pred eEEEeEEECHHHcCCCCeEcHHHHHHHHHHH-HHHHHHHcCCCHHHHhcCCcEEEEEEEEEEcccCCCCCEEEEEEEEEe
Confidence 3356899999999999999999999998665 4444432 2579999999999999999999999988
Q ss_pred cccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 367 KDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 367 ~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
+| +.++.+.|.+++++|+++|+|+++|+++|... +....+|.+
T Consensus 424 --~~----~~s~~~~~~i~~~~g~l~A~g~~~~v~vD~~t-rr~~~iP~e 466 (495)
T PRK07531 424 --GD----EKRLHLFHTLYDAGGELIATAEHMLLHVDLKA-GKAVPAPAA 466 (495)
T ss_pred --cC----CcEEEEEEEEECCCCcEEEEEEEEEEEEECCC-CccCCCCHH
Confidence 65 68899999998778999999999999999873 445556643
No 18
>cd00586 4HBT 4-hydroxybenzoyl-CoA thioesterase (4HBT). Catalyzes the final step in the 4-chlorobenzoate degradation pathway in which 4-chlorobenzoate is converted to 4-hydroxybenzoate in certain soil-dwelling bacteria. 4HBT forms a homotetramer with four active sites. There is no evidence to suggest that 4HBT is related to the type I thioesterases functioning in primary or secondary metabolic pathways. Each subunit of the 4HBT tetramer adopts a so-called hot-dog fold similar to those of beta-hydroxydecanoyl-ACP dehydratase, (R)-specific enoyl-CoA hydratase, and type II, thioesterase (TEII).
Probab=99.41 E-value=3.2e-12 Score=104.62 Aligned_cols=95 Identities=23% Similarity=0.287 Sum_probs=78.7
Q ss_pred eeeeccCCCCccccccchhhHHHHHHHhccHhhhh-------------ccceEEEEEEEccCCCCCCeEEEEEEEeeccc
Q 014795 303 RGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE-------------SHQLASVTLEYRRECGRDSVLQSLTAVSDKDI 369 (418)
Q Consensus 303 ~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~-------------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~i 369 (418)
..+.|+++|+|.+||+||..|++|+.++....+.+ .+.+.+.+++|++|+..||.|.+.+++.. .
T Consensus 3 ~~~~v~~~d~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~v~~~~~~--~ 80 (110)
T cd00586 3 LEIRVRFGDTDAAGHVNNARYLRYFEEAREEFLRELGLGYDELEEQGLGLVVVELEIDYLRPLRLGDRLTVETRVLR--L 80 (110)
T ss_pred EEEEEEEhhcCCCCEEchhHHHHHHHHHHHHHHHHcCCCHHHHHhCCceEEEEEeEeeEcCccCCCCEEEEEEEEEe--c
Confidence 56889999999999999999999998875432211 23578999999999999999999999987 4
Q ss_pred CcccccceEEEEEEEEeCCCeEEEEEEEEEEEec
Q 014795 370 GNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKD 403 (418)
Q Consensus 370 G~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d 403 (418)
+ +.++...+.+..++|+++|+++++|+.+|
T Consensus 81 ~----~~~~~~~~~~~~~~g~~~a~~~~~~~~~d 110 (110)
T cd00586 81 G----RKSFTFEQEIFREDGELLATAETVLVCVD 110 (110)
T ss_pred C----cEEEEEEEEEECCCCeEEEEEEEEEEEeC
Confidence 4 46666777777667999999999999875
No 19
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=99.33 E-value=7e-11 Score=100.29 Aligned_cols=113 Identities=15% Similarity=0.090 Sum_probs=94.7
Q ss_pred eeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEe-EEEEeecCCCCCEE
Q 014795 137 FIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVV 215 (418)
Q Consensus 137 ~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~-~Iey~r~p~~gD~V 215 (418)
-.+...+.|++.++|+.|+++.+.|+.++++++..++... ... .++.... +++|.+|..+||.|
T Consensus 6 ~~~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~~~~~~~~-------------~~~--~~~~~~~~~~~f~~p~~~gd~l 70 (123)
T cd03442 6 TELSTRELVLPEDTNHHGTIFGGWLLEWMDELAGIAAYRH-------------AGG--RVVTASVDRIDFLKPVRVGDVV 70 (123)
T ss_pred cceEEEEEeCCcccCcCCcEeHHHHHHHHHHHHHHHHHHH-------------hCC--cEEEEEECceEEcCccccCcEE
Confidence 3567799999999999999999999999999987665421 111 2344455 79999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECC----CCcEEEEEEEEEEEEECCCCceeCCC
Q 014795 216 NVETWVSASGKNGMRRDWLIRNAK----TGETLTRATSLWVMMNKLTRRLSKMP 265 (418)
Q Consensus 216 ~V~Twv~~~gk~~~~R~f~I~d~~----~Gevla~A~S~wV~iDl~TRRpvrIP 265 (418)
.+++++.+.++.++..++.+++.+ +++++++|..++|++| .++||.++|
T Consensus 71 ~i~~~v~~~g~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~-~~~~~~~~p 123 (123)
T cd03442 71 ELSARVVYTGRTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALD-EDGKPRPVP 123 (123)
T ss_pred EEEEEEEEecCCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEEC-CCCCeeeCC
Confidence 999999999999999999999742 2479999999999999 568999887
No 20
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=98.96 E-value=2.8e-08 Score=76.11 Aligned_cols=97 Identities=21% Similarity=0.205 Sum_probs=87.5
Q ss_pred EEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEE
Q 014795 141 QNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETW 220 (418)
Q Consensus 141 ~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Tw 220 (418)
..++|+++|+|.+++++...++.++++++..++...+. .+..+++.+++++|.+++.+||.|.++++
T Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~g~~v~~~~~ 69 (100)
T cd03440 3 LRLTVTPEDIDGGGIVHGGLLLALADEAAGAAAARLGG-------------RGLGAVTLSLDVRFLRPVRPGDTLTVEAE 69 (100)
T ss_pred EEEEeCHHHcCcCCccchHHHHHHHHHHHHHHHHHhcc-------------CCCeEEEEEEEeEEecCCCCCCEEEEEEE
Confidence 47899999999999999999999999999999875421 56789999999999999999999999999
Q ss_pred EEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 221 VSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 221 v~~~gk~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
+.+.++..+.....+.+. +|++++.+...+
T Consensus 70 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 99 (100)
T cd03440 70 VVRVGRSSVTVEVEVRNE-DGKLVATATATF 99 (100)
T ss_pred EEeccccEEEEEEEEECC-CCCEEEEEEEEe
Confidence 999999999888999884 799999987765
No 21
>cd03442 BFIT_BACH Brown fat-inducible thioesterase (BFIT). Brain acyl-CoA hydrolase (BACH). These enzymes deacylate long-chain fatty acids by hydrolyzing acyl-CoA thioesters to free fatty acids and CoA-SH. Eukaryotic members of this family are expressed in brain, testis, and brown adipose tissues. The archeal and eukaryotic members of this family have two tandem copies of the conserved hot dog fold, while most bacterial members have only one copy.
Probab=98.89 E-value=4.5e-08 Score=82.94 Aligned_cols=97 Identities=16% Similarity=0.076 Sum_probs=78.2
Q ss_pred eeeeeeccCCCCccccccchhhHHHHHHHhccHhhhh---c--cceEEE-EEEEccCCCCCCeEEEEEEEeecccCcccc
Q 014795 301 VRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE---S--HQLASV-TLEYRRECGRDSVLQSLTAVSDKDIGNLVN 374 (418)
Q Consensus 301 ~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~---~--~~l~~~-~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~ 374 (418)
....+.|++.|+|..||||+..|+.|+.++. ..++. . .....+ +++|++|+..||.|.+..++.. +|
T Consensus 8 ~~~~~~v~~~~~d~~g~v~~g~~~~~~d~a~-~~~~~~~~~~~~~~~~~~~~~f~~p~~~gd~l~i~~~v~~--~g---- 80 (123)
T cd03442 8 LSTRELVLPEDTNHHGTIFGGWLLEWMDELA-GIAAYRHAGGRVVTASVDRIDFLKPVRVGDVVELSARVVY--TG---- 80 (123)
T ss_pred eEEEEEeCCcccCcCCcEeHHHHHHHHHHHH-HHHHHHHhCCcEEEEEECceEEcCccccCcEEEEEEEEEE--ec----
Confidence 4578999999999999999999999986653 33221 1 234566 7999999999999999999988 56
Q ss_pred cceEEEEEEEEeCC-----CeEEEEEEEEEEEecC
Q 014795 375 LGSVECQHLLRLEE-----GAEVLRARTEWRPKDA 404 (418)
Q Consensus 375 ~~s~~~~h~i~~~d-----G~~va~a~t~w~~~d~ 404 (418)
+.++.++..++.++ ++++|+|++++++.+.
T Consensus 81 ~~~~~~~~~i~~~~~~~~~~~~~a~~~~~~v~~~~ 115 (123)
T cd03442 81 RTSMEVGVEVEAEDPLTGERRLVTSAYFTFVALDE 115 (123)
T ss_pred CCeEEEEEEEEEecCCCCcEEEEEEEEEEEEEECC
Confidence 57888888887654 4699999999999974
No 22
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.83 E-value=6.1e-08 Score=75.79 Aligned_cols=79 Identities=15% Similarity=0.135 Sum_probs=70.9
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEE
Q 014795 153 DGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRD 232 (418)
Q Consensus 153 ~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~ 232 (418)
+|+|+++.|+.|+++|+..++...+. .+...++...+++|.+|.+.||.|++++++.+.++.++...
T Consensus 1 ~G~v~~g~~~~~~d~a~~~~~~~~~~-------------~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~~g~~~~~~~ 67 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAASAALRSHGG-------------DGRGVVTVELSIDFLRPVRPGDTLRVEARVVRVGRKSFTVE 67 (79)
T ss_dssp TSSBCHHHHHHHHHHHHHHHHHHHHS-------------STEEEEEEEEEEEESS-BBTTSEEEEEEEEEEEESSEEEEE
T ss_pred CCEEhHHHHHHHHHHHHHHHHHHhcc-------------CCcceEEEEEEEEEccccCCCeEEEEEEEEEEECCEEEEEE
Confidence 59999999999999999999987642 16789999999999999999999999999999999999999
Q ss_pred EEEEECCCCcEEE
Q 014795 233 WLIRNAKTGETLT 245 (418)
Q Consensus 233 f~I~d~~~Gevla 245 (418)
+++++. +++++|
T Consensus 68 ~~v~~~-~~~~~~ 79 (79)
T PF03061_consen 68 VEVYSE-DGRLCA 79 (79)
T ss_dssp EEEEET-TSCEEE
T ss_pred EEEEEC-CCcEEC
Confidence 999995 787765
No 23
>cd03440 hot_dog The hotdog fold was initially identified in the E. coli FabA (beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase) structure and subsequently in 4HBT (4-hydroxybenzoyl-CoA thioesterase) from Pseudomonas. A number of other seemingly unrelated proteins also share the hotdog fold. These proteins have related, but distinct, catalytic activities that include metabolic roles such as thioester hydrolysis in fatty acid metabolism, and degradation of phenylacetic acid and the environmental pollutant 4-chlorobenzoate. This superfamily also includes the PaaI-like protein FapR, a non-catalytic bacterial homolog involved in transcriptional regulation of fatty acid biosynthesis.
Probab=98.70 E-value=2.5e-07 Score=70.73 Aligned_cols=90 Identities=21% Similarity=0.171 Sum_probs=73.7
Q ss_pred eeeeccCCCCccccccchhhHHHHHHHhccHhhhh-------ccceEEEEEEEccCCCCCCeEEEEEEEeecccCccccc
Q 014795 303 RGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE-------SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNL 375 (418)
Q Consensus 303 ~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~-------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~ 375 (418)
..+++++.|+|.++|+|+..|+.|+.++.. .++. ...+.+++++|++|+++||.|.+.+++.. .+ +
T Consensus 3 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~~~--~~----~ 75 (100)
T cd03440 3 LRLTVTPEDIDGGGIVHGGLLLALADEAAG-AAAARLGGRGLGAVTLSLDVRFLRPVRPGDTLTVEAEVVR--VG----R 75 (100)
T ss_pred EEEEeCHHHcCcCCccchHHHHHHHHHHHH-HHHHHhccCCCeEEEEEEEeEEecCCCCCCEEEEEEEEEe--cc----c
Confidence 468899999999999999999999866644 3333 34688999999999999999999999987 44 4
Q ss_pred ceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 376 GSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 376 ~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
..+.+...+..++|++++.++..+
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~ 99 (100)
T cd03440 76 SSVTVEVEVRNEDGKLVATATATF 99 (100)
T ss_pred cEEEEEEEEECCCCCEEEEEEEEe
Confidence 567777777776799999998765
No 24
>PLN02370 acyl-ACP thioesterase
Probab=98.67 E-value=2.4e-07 Score=96.10 Aligned_cols=109 Identities=18% Similarity=0.207 Sum_probs=89.7
Q ss_pred eeeeeeccCCCCccccccchhhHHHHHHHhccHh---------------hhh----ccceEEEEEEEccCCCCCCeEEEE
Q 014795 301 VRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQ---------------ILE----SHQLASVTLEYRRECGRDSVLQSL 361 (418)
Q Consensus 301 ~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e---------------~l~----~~~l~~~~I~Y~~E~~~gd~l~v~ 361 (418)
.+.+++||++|+|.+|++.=...+.|++|++-.. .+. .++|.+++|+|.++.++||.|.+.
T Consensus 140 y~~~f~Ir~yEvD~~g~lsl~~L~n~lQd~A~~Hs~~lGll~~Gfg~~~~m~~~gl~WVLtr~~I~~~R~P~~gD~V~V~ 219 (419)
T PLN02370 140 FRQNFSIRSYEIGADRTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMSKRNLIWVVTRMQVLVDRYPTWGDVVQVD 219 (419)
T ss_pred EEEEEEEeeEEECCCCCCCHHHHHHHHHHHHHHHHHHhCccccccccHHHHHhCCceEEEEEEEEEeCcCCCCCCEEEEE
Confidence 3578999999999999999999999999985322 111 256999999999999999999999
Q ss_pred EEEeecccCcccccceEEEEEEEEeC-CCeEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 362 TAVSDKDIGNLVNLGSVECQHLLRLE-EGAEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 362 t~v~~~~iG~~~~~~s~~~~h~i~~~-dG~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
||+.. +| +.++...+.|++. +|+++++|.++|+++|.. -+....||.|
T Consensus 220 Twv~~--~~----k~~~~Rdf~I~D~~~Ge~la~A~SvWV~mD~~-TRRpvRIP~E 268 (419)
T PLN02370 220 TWVSA--SG----KNGMRRDWLVRDCKTGETLTRASSVWVMMNKL-TRRLSKIPEE 268 (419)
T ss_pred EEEee--CC----CCEEEEEEEEEECCCCeEEEEEEEEEEEEECC-CCcccCCCHH
Confidence 99987 55 4666667788875 799999999999999987 4556666654
No 25
>PF03061 4HBT: Thioesterase superfamily; InterPro: IPR006683 This family contains a wide variety of enzymes, principally thioesterases. This family includes 4HBT (3.1.2.23 from EC) which catalyses the final step in the biosynthesis of 4-hydroxybenzoate from 4-chlorobenzoate in the soil dwelling microbe Pseudomonas CBS-3. This family includes various cytosolic long-chain acyl-CoA thioester hydrolases. Long-chain acyl-CoA hydrolases hydrolyse palmitoyl-CoA to CoA and palmitate, they also catalyse the hydrolysis of other long chain fatty acyl-CoA thioesters. ; PDB: 3F5O_F 2F0X_D 2H4U_C 2PRX_A 2OV9_D 1YLI_B 3BJK_F 1IXL_A 3DKZ_B 2EIS_B ....
Probab=98.62 E-value=2.6e-07 Score=72.22 Aligned_cols=72 Identities=18% Similarity=0.208 Sum_probs=59.9
Q ss_pred ccccchhhHHHHHHHhccHhhhh-------ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeC
Q 014795 315 NQHVNNVKYIGWILESAPQQILE-------SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLE 387 (418)
Q Consensus 315 ngHVNN~~Yl~w~~e~~~~e~l~-------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~ 387 (418)
||||||..|+.|++++. ..++. ...+.+++|+|++|++.||.|.+.+++.. +| +.++.+.++++.+
T Consensus 1 ~G~v~~g~~~~~~d~a~-~~~~~~~~~~~~~~~~~~~~i~f~~p~~~gd~l~~~~~v~~--~g----~~~~~~~~~v~~~ 73 (79)
T PF03061_consen 1 NGIVHGGVYLSLFDEAA-SAALRSHGGDGRGVVTVELSIDFLRPVRPGDTLRVEARVVR--VG----RKSFTVEVEVYSE 73 (79)
T ss_dssp TSSBCHHHHHHHHHHHH-HHHHHHHHSSTEEEEEEEEEEEESS-BBTTSEEEEEEEEEE--EE----SSEEEEEEEEEET
T ss_pred CCEEhHHHHHHHHHHHH-HHHHHHhccCCcceEEEEEEEEEccccCCCeEEEEEEEEEE--EC----CEEEEEEEEEEEC
Confidence 79999999999986653 33332 23578999999999999999999999988 66 6889999999999
Q ss_pred CCeEEE
Q 014795 388 EGAEVL 393 (418)
Q Consensus 388 dG~~va 393 (418)
++.++|
T Consensus 74 ~~~~~~ 79 (79)
T PF03061_consen 74 DGRLCA 79 (79)
T ss_dssp TSCEEE
T ss_pred CCcEEC
Confidence 998886
No 26
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.59 E-value=2.1e-06 Score=71.66 Aligned_cols=102 Identities=10% Similarity=0.036 Sum_probs=88.5
Q ss_pred CeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEE
Q 014795 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (418)
Q Consensus 136 ~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V 215 (418)
+...+..+++...++|..|+++...|..+++.++...+.... ..+...++.+++++|.+|+.. +.|
T Consensus 11 ~~~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~~~~~~~~-------------~~~~~~~~~~~~i~f~~p~~~-~~v 76 (113)
T cd03443 11 PGRVVLRLPVRPRHLNPGGIVHGGAIATLADTAGGLAALSAL-------------PPGALAVTVDLNVNYLRPARG-GDL 76 (113)
T ss_pred CCeEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHHHHHhhcc-------------CCCCceEEEEEEEeEEcCCCC-CeE
Confidence 345667889999999999999999999999999987776431 134567889999999999999 999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 216 ~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
.+++++.+.++.....+..+++. +|+++++|..+|+
T Consensus 77 ~~~~~v~~~g~~~~~~~~~~~~~-~~~~~a~a~~~~~ 112 (113)
T cd03443 77 TARARVVKLGRRLAVVEVEVTDE-DGKLVATARGTFA 112 (113)
T ss_pred EEEEEEEecCceEEEEEEEEECC-CCCEEEEEEEEEe
Confidence 99999999999999889999984 6999999999886
No 27
>PF01643 Acyl-ACP_TE: Acyl-ACP thioesterase; InterPro: IPR002864 This entry represents various acyl-acyl carrier protein (ACP) thioesterases (TE) which terminate fatty acyl group extension via hydrolysing an acyl group on a fatty acid []. These proteins contain a duplication of two 4HBT-like domains.; GO: 0016790 thiolester hydrolase activity, 0006633 fatty acid biosynthetic process; PDB: 2ESS_A 2OWN_A.
Probab=98.59 E-value=2.5e-07 Score=90.42 Aligned_cols=96 Identities=18% Similarity=0.334 Sum_probs=70.4
Q ss_pred CeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEE
Q 014795 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (418)
Q Consensus 136 ~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V 215 (418)
...+..+++||++|+|.+|||||..|++|+.++--.. +.+ .-.+.++.|.|.++..+||.|
T Consensus 163 ~~~~~~~~~vr~sDiD~N~HVNN~~Yl~w~~d~lp~~----------------~~~---~~~~~~i~I~y~~E~~~gd~i 223 (261)
T PF01643_consen 163 EPEFEKEFTVRYSDIDMNGHVNNARYLDWALDALPEE----------------FLE---KYQIKSIDINYKKEIRYGDTI 223 (261)
T ss_dssp TTSECEEEE--GGGEETTTCE-HHHHHHHHHCCS-HH----------------HHC---CEEEEEEEEEE-S--BTT-EE
T ss_pred hhheeecccccHHHCCCCCCcCHHHHHHHHHHhCcch----------------hhc---cCCcEEEEEEEccccCCCCEE
Confidence 5567899999999999999999999999999884222 111 245889999999999999999
Q ss_pred EEEEEEEEeC-CcEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 216 NVETWVSASG-KNGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 216 ~V~Twv~~~g-k~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
.+.+.+.... .......+.|++. +|+.++++.+.|
T Consensus 224 ~~~~~~~~~~~~~~~~~~h~i~~~-~g~~~~~~~~~W 259 (261)
T PF01643_consen 224 TSYTEVEKDEEEDGLSTLHEIRNE-DGEEVARARTEW 259 (261)
T ss_dssp EEEEEEEEECCTTEEEEEEEEECT--TCEEEEEEEEE
T ss_pred EEEEEEcccccCCceEEEEEEEcC-CCceEEEEEEEE
Confidence 9999876543 3344556788884 599999999999
No 28
>PLN02647 acyl-CoA thioesterase
Probab=98.50 E-value=0.00015 Score=75.84 Aligned_cols=254 Identities=10% Similarity=0.031 Sum_probs=157.8
Q ss_pred EEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEE-eEEEEeecCCCCCEEEEEEE
Q 014795 142 NFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTR-MQVVVDRYPTWNDVVNVETW 220 (418)
Q Consensus 142 ~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r-~~Iey~r~p~~gD~V~V~Tw 220 (418)
+..+|-.+++..|++..+.+|.+|.++|.--+....-..+ .....+..|-+. -+|+|.+|++.||.|.+...
T Consensus 97 d~~l~~~y~N~~G~l~gG~LLe~mD~~A~~~A~rh~~~~~-------~~~~p~~vVTAsVD~i~F~~Pi~~g~~v~l~g~ 169 (437)
T PLN02647 97 DFILREQYRNPWNEVRIGKLLEDLDALAGTISVKHCSDDD-------STTRPLLLVTASVDKIVLKKPIRVDVDLKIVGA 169 (437)
T ss_pred chhhchhhcCCCCcEeHhHHHHHHHHHHHHHHHHHhCCCc-------ccCCcceEEEEEECcEEEcCCCcCCcEEEEEEE
Confidence 4478888899999999999999999988766554221000 111222233322 36789999999999999999
Q ss_pred EEEeCCcEEEEEEEEEECC------CCcEEEEEEEEEEEEECCCCceeCCCHHH------HHhhcccc------------
Q 014795 221 VSASGKNGMRRDWLIRNAK------TGETLTRATSLWVMMNKLTRRLSKMPDEV------RQEIEPYF------------ 276 (418)
Q Consensus 221 v~~~gk~~~~R~f~I~d~~------~Gevla~A~S~wV~iDl~TRRpvrIP~ev------~e~l~~y~------------ 276 (418)
|...|+.+|...-.++... ...+++.|..++|.+|-+++||+++|+.. +..++...
T Consensus 170 Vt~vGrSSMEV~v~V~~~~~~~~~~~~~~~~~a~FtfVA~D~~~gkp~pVp~l~pete~Ek~~~e~a~~R~~~Rk~~r~~ 249 (437)
T PLN02647 170 VTWVGRSSMEIQLEVIQPTKDESNTSDSVALTANFTFVARDSKTGKSAPVNRLSPETEEEKLLFEEAEARNKLRKKKRGE 249 (437)
T ss_pred EEEecCCeEEEEEEEEEccccCCCCcEEEEEEEEEEEEEEcCCCCCeeeCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999998776776421 22468899999999998789999887522 11111000
Q ss_pred -cCCC-CC----Cccc---cCC---CCCC---CC--CCcceeeeeeeccCCCCccccccchhhHHHHHHHhccHhh--hh
Q 014795 277 -LNSD-PV----VDED---SRK---LPKL---GD--STADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQI--LE 337 (418)
Q Consensus 277 -~~~~-p~----~~~~---~~k---l~k~---~~--~~~~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~--l~ 337 (418)
.... +. +... .+. .+.+ +. ......+..+.+...|...+|.+.=..-+.|+.|++-... +.
T Consensus 250 ~~~~~~~~e~~~l~~l~~~~~~~~~~p~l~~~~~v~m~dT~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r~a 329 (437)
T PLN02647 250 QKREFENGEAERLEALLAEGRVFCDMPALADRNSILIRDTRLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYAFA 329 (437)
T ss_pred hcccCCchHHHHHHHHHHhccccccCcccCCccceeccccceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHHHc
Confidence 0000 00 0000 000 0111 00 0011234556788999999999999999999988754322 11
Q ss_pred ccce---EEEEEEEccCCCCCCeEEEEEEEeecccCcc-cccceEEEEEEEE--eC---CCeEEEEEEEEEEEecC
Q 014795 338 SHQL---ASVTLEYRRECGRDSVLQSLTAVSDKDIGNL-VNLGSVECQHLLR--LE---EGAEVLRARTEWRPKDA 404 (418)
Q Consensus 338 ~~~l---~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~-~~~~s~~~~h~i~--~~---dG~~va~a~t~w~~~d~ 404 (418)
...+ .=-+|+|++|++.||.|.+...|.. .|.. ..+.++++.-..+ .. .++.+..+..+++..|.
T Consensus 330 ~~~~vt~svd~v~F~~PV~vGdil~l~A~V~y--t~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~ 403 (437)
T PLN02647 330 GLRPYFLEVDHVDFLRPVDVGDFLRFKSCVLY--TELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPE 403 (437)
T ss_pred CCceEEEEecceEecCccccCcEEEEEEEEEE--EeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEecc
Confidence 2222 2337899999999999998776654 2200 0023444432222 22 34567789999998876
No 29
>cd03443 PaaI_thioesterase PaaI_thioesterase is a tetrameric acyl-CoA thioesterase with a hot dog fold and one of several proteins responsible for phenylacetic acid (PA) degradation in bacteria. Although orthologs of PaaI exist in archaea and eukaryotes, their function has not been determined. Sequence similarity between PaaI, E. coli medium chain acyl-CoA thioesterase II, and human thioesterase III suggests they all belong to the same thioesterase superfamily. The conserved fold present in these thioesterases is referred to as an asymmetric hot dog fold, similar to those of 4-hydroxybenzoyl-CoA thioesterase (4HBT) and the beta-hydroxydecanoyl-ACP dehydratases (FabA/FabZ).
Probab=98.34 E-value=1.1e-05 Score=67.40 Aligned_cols=93 Identities=16% Similarity=0.059 Sum_probs=76.6
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhh-------ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcc
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE-------SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNL 372 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~-------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~ 372 (418)
..+..+++.+.++|..|++|+..|..|+..+.. .++. ...+.+++++|++|+.. +.+.+.+++.. .|
T Consensus 13 ~~~~~~~~~~~~~n~~g~vhgg~l~~l~d~a~~-~~~~~~~~~~~~~~~~~~~i~f~~p~~~-~~v~~~~~v~~--~g-- 86 (113)
T cd03443 13 RVVLRLPVRPRHLNPGGIVHGGAIATLADTAGG-LAALSALPPGALAVTVDLNVNYLRPARG-GDLTARARVVK--LG-- 86 (113)
T ss_pred eEEEEeeCcHhhcCCCCeEeHHHHHHHHHHHHH-HHHhhccCCCCceEEEEEEEeEEcCCCC-CeEEEEEEEEe--cC--
Confidence 456789999999999999999999999855543 3322 22578999999999999 99999999887 45
Q ss_pred cccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 373 VNLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 373 ~~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
+.++.+...++.++|+++|+|..+|+
T Consensus 87 --~~~~~~~~~~~~~~~~~~a~a~~~~~ 112 (113)
T cd03443 87 --RRLAVVEVEVTDEDGKLVATARGTFA 112 (113)
T ss_pred --ceEEEEEEEEECCCCCEEEEEEEEEe
Confidence 56778888888777999999999886
No 30
>PRK10694 acyl-CoA esterase; Provisional
Probab=98.32 E-value=2.8e-05 Score=68.69 Aligned_cols=111 Identities=15% Similarity=0.056 Sum_probs=88.4
Q ss_pred EEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEe-EEEEeecCCCCCEEEEE
Q 014795 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRM-QVVVDRYPTWNDVVNVE 218 (418)
Q Consensus 140 ~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~-~Iey~r~p~~gD~V~V~ 218 (418)
...+.+...|++..|.++=..+|.|+.+++.-.+... .+-.++.+++ .++|.+|.+.||.|.++
T Consensus 13 ~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~---------------~~~~~vtv~vd~i~F~~Pv~~Gd~l~~~ 77 (133)
T PRK10694 13 VLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEI---------------AHGRVVTVRVEGMTFLRPVAVGDVVCCY 77 (133)
T ss_pred EEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHH---------------cCCceEEEEECceEECCCcccCcEEEEE
Confidence 3456899999999999999999999999876555422 1224677777 67999999999999999
Q ss_pred EEEEEeCCcEEEEEEEEEECC-----CC--cEEEEEEEEEEEEECCCCceeCCCH
Q 014795 219 TWVSASGKNGMRRDWLIRNAK-----TG--ETLTRATSLWVMMNKLTRRLSKMPD 266 (418)
Q Consensus 219 Twv~~~gk~~~~R~f~I~d~~-----~G--evla~A~S~wV~iDl~TRRpvrIP~ 266 (418)
.++...|+.++....+++.+. .| +.++.|..++|.+| +.+||.++|+
T Consensus 78 a~V~~~g~sS~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd-~~g~p~~vp~ 131 (133)
T PRK10694 78 ARCVKTGTTSISINIEVWVKKVASEPIGQRYKATEALFTYVAVD-PEGKPRALPV 131 (133)
T ss_pred EEEEEccCceEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEEC-CCCCEEeCCC
Confidence 999999999998877777411 12 34677888888898 5789999884
No 31
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=97.80 E-value=0.001 Score=60.41 Aligned_cols=113 Identities=13% Similarity=0.064 Sum_probs=88.1
Q ss_pred EEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEE
Q 014795 141 QNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETW 220 (418)
Q Consensus 141 ~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Tw 220 (418)
....+-..|++++|.++=..+|.|+.+++.-.+... ..+..--+.=-.+.|.+|.+.||.|.+..+
T Consensus 16 ~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~--------------a~~~vVTasvd~v~F~~Pv~vGd~v~~~a~ 81 (157)
T COG1607 16 LRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRH--------------AGGRVVTASVDSVDFKKPVRVGDIVCLYAR 81 (157)
T ss_pred EEEEecCCccCcccccccHHHHHHHHHHHHHHHHHH--------------hCCeEEEEEeceEEEccccccCcEEEEEEE
Confidence 567899999999999999999999999986554432 122222233346889999999999999999
Q ss_pred EEEeCCcEEEEEEEEEEC----CCCcEEEEEEEEEEEEECCCCceeCCCHHH
Q 014795 221 VSASGKNGMRRDWLIRNA----KTGETLTRATSLWVMMNKLTRRLSKMPDEV 268 (418)
Q Consensus 221 v~~~gk~~~~R~f~I~d~----~~Gevla~A~S~wV~iDl~TRRpvrIP~ev 268 (418)
+...|+.++...-+++.+ ......+.|.-++|-+|-+ +||.++|++.
T Consensus 82 v~~~GrTSm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~-gkP~~vp~~~ 132 (157)
T COG1607 82 VVYTGRTSMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED-GKPTPVPREE 132 (157)
T ss_pred EeecCcccEEEEEEEEEecccCCcceEeeeEEEEEEEECCC-CCcccCCccC
Confidence 999999999887777642 1234566788888888866 9999999754
No 32
>COG3884 FatA Acyl-ACP thioesterase [Lipid metabolism]
Probab=97.63 E-value=0.00018 Score=68.63 Aligned_cols=88 Identities=9% Similarity=0.025 Sum_probs=68.1
Q ss_pred eEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEE
Q 014795 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (418)
Q Consensus 138 ~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V 217 (418)
.+...|.||++|+|.+|||||+.|.+|+.|.-..++-.+ . -..++.++|.++...||+|+|
T Consensus 152 s~~~~f~vR~~DID~f~HvNNskY~~wi~e~l~~~~~~~---------------~----~p~r~~l~y~keva~G~~iti 212 (250)
T COG3884 152 SEIHDFPVRYTDIDMFGHVNNSKYWSWIEEVLGSEFLKL---------------Y----GPLRLTLEYVKEVAPGEKITI 212 (250)
T ss_pred cccccceeEEEeeccccccccceehHHHHHHHhhhhHhh---------------c----ccceeEEEEEcccCCCCeEEE
Confidence 556689999999999999999999999999866444321 1 135889999999999999999
Q ss_pred EEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 218 ETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 218 ~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
.+.+.+.+..- .| .. ||.+.+.+..+|
T Consensus 213 ~~e~~~~~s~~-----~f-~~-d~~v~~lt~i~~ 239 (250)
T COG3884 213 VYEVHPLESKH-----QF-TS-DGQVNALTYIVG 239 (250)
T ss_pred EEEEcccCcee-----ee-cC-CcceEEEEEEEe
Confidence 99998765432 12 22 677777777666
No 33
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=97.61 E-value=0.0027 Score=54.01 Aligned_cols=98 Identities=8% Similarity=-0.070 Sum_probs=80.2
Q ss_pred EEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEE
Q 014795 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (418)
Q Consensus 140 ~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~T 219 (418)
+..+.++...++..|.++=..++.+++.+..-..... ...+...+-+.++++|.||+.-| .|+++.
T Consensus 19 ~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~-------------~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a 84 (117)
T TIGR00369 19 EATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYLC-------------NSGGQAVVGLELNANHLRPAREG-KVRAIA 84 (117)
T ss_pred EEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHhh-------------cCCCceEEEEEEEeeeccccCCC-EEEEEE
Confidence 5578899999999999999999999988873322211 12234567779999999999998 999999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 220 wv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
++.+.++.....+-+++|. +|+++++++.++.
T Consensus 85 ~v~~~gr~~~~~~~~i~~~-~g~~va~~~~t~~ 116 (117)
T TIGR00369 85 QVVHLGRQTGVAEIEIVDE-QGRLCALSRGTTA 116 (117)
T ss_pred EEEecCceEEEEEEEEECC-CCCEEEEEEEEEc
Confidence 9999999888888899995 8999999998764
No 34
>PRK10694 acyl-CoA esterase; Provisional
Probab=97.51 E-value=0.0024 Score=56.45 Aligned_cols=107 Identities=12% Similarity=0.077 Sum_probs=81.3
Q ss_pred eeeeeccCCCCccccccchhhHHHHHHHhccHhhhh----ccceEEE-EEEEccCCCCCCeEEEEEEEeecccCcccccc
Q 014795 302 RRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE----SHQLASV-TLEYRRECGRDSVLQSLTAVSDKDIGNLVNLG 376 (418)
Q Consensus 302 ~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~----~~~l~~~-~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~ 376 (418)
.....+...|+..+|-+.--..+.|+.+++-....+ .....++ .|+|++|++.||.|.+..++.. .| ++
T Consensus 13 ~~~~~v~p~~~N~~g~lfGG~ll~~~D~~a~i~a~~~~~~~~vtv~vd~i~F~~Pv~~Gd~l~~~a~V~~--~g----~s 86 (133)
T PRK10694 13 VLRTLAMPADTNANGDIFGGWLMSQMDIGGAILAKEIAHGRVVTVRVEGMTFLRPVAVGDVVCCYARCVK--TG----TT 86 (133)
T ss_pred EEEEEcChhhcCCCCcEeHHHHHHHHHHHHHHHHHHHcCCceEEEEECceEECCCcccCcEEEEEEEEEE--cc----Cc
Confidence 455789999999999999999999997764332211 1245667 6699999999999999999988 66 68
Q ss_pred eEEEEEEEEeCC------C--eEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 377 SVECQHLLRLEE------G--AEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 377 s~~~~h~i~~~d------G--~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
|++++..++.++ | ..++.+..+++.+|.+ |...++|..
T Consensus 87 S~~v~v~v~~~~~~~~~~g~~~~~~~~~~tfVavd~~--g~p~~vp~~ 132 (133)
T PRK10694 87 SISINIEVWVKKVASEPIGQRYKATEALFTYVAVDPE--GKPRALPVG 132 (133)
T ss_pred eEEEEEEEEEeecccCCCCcEEEEEEEEEEEEEECCC--CCEEeCCCC
Confidence 888877776421 2 3577899999999876 556667754
No 35
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=97.34 E-value=0.0084 Score=50.87 Aligned_cols=96 Identities=14% Similarity=0.024 Sum_probs=78.4
Q ss_pred EEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEE
Q 014795 141 QNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETW 220 (418)
Q Consensus 141 ~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Tw 220 (418)
..+.++...++..|.++=..++-++..+....+.. .+..-+...++++|.||...||.|.++.+
T Consensus 18 ~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~~----------------~~~~~~t~~~~i~f~rp~~~G~~l~~~a~ 81 (114)
T TIGR02286 18 VAMTVRADMLNGHGTAHGGFLFSLADSAFAYACNS----------------YGDAAVAAQCTIDFLRPGRAGERLEAEAV 81 (114)
T ss_pred EEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhcC----------------CCCceEEEEEEEEEecCCCCCCEEEEEEE
Confidence 37888989999999999999999999886433211 01113467889999999999999999999
Q ss_pred EEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 014795 221 VSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (418)
Q Consensus 221 v~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~ 253 (418)
+.+.++.....+-++++ ++|++++.++.+|-.
T Consensus 82 v~~~g~~~~~~~~~i~~-~~~~~va~~~~t~~~ 113 (114)
T TIGR02286 82 EVSRGGRTGTYDVEVVN-QEGELVALFRGTSRR 113 (114)
T ss_pred EEEeCCcEEEEEEEEEc-CCCCEEEEEEEEEEE
Confidence 99999887777788998 589999999998854
No 36
>PRK10293 acyl-CoA esterase; Provisional
Probab=96.93 E-value=0.041 Score=48.75 Aligned_cols=100 Identities=8% Similarity=-0.120 Sum_probs=81.9
Q ss_pred EEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEE
Q 014795 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (418)
Q Consensus 140 ~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~T 219 (418)
+.++.|+-..+.+.|.++=..++.+++.++....... ...+...+-..++++|.+|.+-| .|..+-
T Consensus 37 ~~~~~v~~~~~n~~G~lHGGv~~tLaD~a~~~a~~~~-------------~~~~~~~vTiel~infl~p~~~g-~l~a~a 102 (136)
T PRK10293 37 EATMPVDSRTKQPFGLLHGGASVVLAESIGSVAGYLC-------------TEGEQKVVGLEINANHVRSAREG-RVRGVC 102 (136)
T ss_pred EEEEEcCHHHcCCcCcccHHHHHHHHHHHHHHHHHhc-------------ccCCceEEEEEEEeEEecccCCc-eEEEEE
Confidence 4477888888999999999999999987654333211 12345678889999999999877 699999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 220 wv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
++.+.|+..+..+-+++|. +|++++.++.++.++
T Consensus 103 ~vv~~Gr~~~~~~~~v~d~-~g~l~A~~~~t~~i~ 136 (136)
T PRK10293 103 KPLHLGSRHQVWQIEIFDE-KGRLCCSSRLTTAIL 136 (136)
T ss_pred EEEecCCCEEEEEEEEEeC-CCCEEEEEEEEEEEC
Confidence 9999999988888999995 899999999998764
No 37
>PRK11688 hypothetical protein; Provisional
Probab=96.90 E-value=0.011 Score=53.26 Aligned_cols=126 Identities=11% Similarity=0.095 Sum_probs=82.6
Q ss_pred CHHHHHhhcccccCCCCCCccccCCCCCCCCCCcceeeeeeeccCCCCc--cccccchhhHHHHHHHhccHhhhh-----
Q 014795 265 PDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLD--VNQHVNNVKYIGWILESAPQQILE----- 337 (418)
Q Consensus 265 P~ev~e~l~~y~~~~~p~~~~~~~kl~k~~~~~~~~~~~~i~VR~sDlD--~ngHVNN~~Yl~w~~e~~~~e~l~----- 337 (418)
|+++++.+...+....|......-++....+ ......++++-..+. ..|.++=-.+...+..+.....+.
T Consensus 6 ~~~~~~~~~~~~~~~~pf~~~lG~~~~~~~~---g~~~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~ 82 (154)
T PRK11688 6 QEEALKLVGEIFVYHMPFNRLLGLELERLEP---DFVELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILAR 82 (154)
T ss_pred HHHHHHHHHHHHHhcCCHHHHhCcEEEEEeC---CEEEEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhcccc
Confidence 5677777776555333432222233333332 345567778877775 568899999998875544333221
Q ss_pred --------------ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 338 --------------SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 338 --------------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
...-.+++++|.+|.. |+.|.....+.+ .| +.-..++-.+++++|+++|+++.+|.
T Consensus 83 ~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~a~a~v~~--~g----~r~~~~~~~i~~~~g~lvA~a~~t~~ 152 (154)
T PRK11688 83 HEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERFTATSSVLR--AG----NKVAVARMELHNEQGVHIASGTATYL 152 (154)
T ss_pred cccccccccccccccceEEEEEEEeeccCC-CCeEEEEEEEEE--cc----CCEEEEEEEEECCCCCEEEEEEEEEE
Confidence 1123689999999996 999999999887 45 23334455777788999999998885
No 38
>COG5496 Predicted thioesterase [General function prediction only]
Probab=96.71 E-value=0.073 Score=46.55 Aligned_cols=109 Identities=10% Similarity=0.116 Sum_probs=87.1
Q ss_pred cCCeeEEEEEEeecCccCCC-------CCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEe
Q 014795 134 QDGFIFRQNFSIRSYEIGAD-------GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVD 206 (418)
Q Consensus 134 ~~~~~f~~~~~VR~~D~D~~-------Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~ 206 (418)
.+++.++.++.|+-.++++- ..+.-+.++.||++|+.+.+.. .| ..|.+-|-++..+.-.
T Consensus 2 ~~g~~~e~~~lv~dn~t~~~~~~~~~~~VlATp~mi~~~E~a~~el~~~------------~L-d~g~ttVG~ev~vrHl 68 (130)
T COG5496 2 MDGLTLEGEFLVRDNHTVPPAEGSGMLNVLATPAMIGFMENASYELLQP------------YL-DNGETTVGTEVLVRHL 68 (130)
T ss_pred CCceeeEEEEEecccccCchhHhCCccceeehHHHHHHHHHHHHHHHHh------------hC-cCCcceeeEEEEeeec
Confidence 36788899999999888832 2345567889999999888763 22 4588899999999999
Q ss_pred ecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECC
Q 014795 207 RYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKL 257 (418)
Q Consensus 207 r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~ 257 (418)
.+.--|.+|+|.+.+.++.+.....+-+.. .+|+.+.+++-+-+.+|.+
T Consensus 69 a~~~~G~~V~i~~~l~~v~Gr~v~f~i~a~--~~~~~Ig~g~h~R~iv~~~ 117 (130)
T COG5496 69 AATPPGLTVTIGARLEKVEGRKVKFRIIAM--EGGDKIGEGTHTRVIVPRE 117 (130)
T ss_pred cCCCCCCeEEEEEEEEEEeccEEEEEEEEe--eCCcEEeeeEEEEEEecHH
Confidence 999999999999999999776655443444 4799999999999998855
No 39
>PRK10254 thioesterase; Provisional
Probab=96.70 E-value=0.11 Score=46.12 Aligned_cols=100 Identities=7% Similarity=-0.054 Sum_probs=83.0
Q ss_pred EEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEE
Q 014795 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (418)
Q Consensus 140 ~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~T 219 (418)
+..+.++...+.+.|.++=..++.+++.++....... ...+...+-..++++|.||.+-| .|..+.
T Consensus 37 ~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~-------------~~~g~~~vTiel~in~Lrp~~~g-~l~a~a 102 (137)
T PRK10254 37 EAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLM-------------TRDGQCVVGTELNATHHRPVSEG-KVRGVC 102 (137)
T ss_pred EEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHHhh-------------CCCCCeEEEEEEEeEEeccCcCC-eEEEEE
Confidence 4467888888999999999999999998865444321 12456789999999999999866 799999
Q ss_pred EEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 220 WVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 220 wv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
.+.+.||.....+-+|+|. +|++++.++.+..++
T Consensus 103 ~vi~~Gr~~~v~~~~v~d~-~g~l~a~~~~t~~i~ 136 (137)
T PRK10254 103 QPLHLGRQNQSWEIVVFDE-QGRRCCTCRLGTAVL 136 (137)
T ss_pred EEEecCcCEEEEEEEEEcC-CCCEEEEEEEEEEEe
Confidence 9999999988888999995 899999999887654
No 40
>TIGR02286 PaaD phenylacetic acid degradation protein PaaD. Sequences scoring between trusted and noise include those from archaea and other species not known to catabolize phenylacetic acid and which are not adjacent to other genes potentially involved with such a pathway.
Probab=96.68 E-value=0.045 Score=46.36 Aligned_cols=96 Identities=15% Similarity=0.027 Sum_probs=71.6
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhhc---cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccc
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILES---HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLG 376 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~---~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~ 376 (418)
.....+.++-..+..+|-++=..++.++..+........ ..-..++++|++|+..||.|.+...+.+ .| +.
T Consensus 15 ~~~~~l~~~~~~~n~~g~~HGG~i~al~D~~~~~~~~~~~~~~~t~~~~i~f~rp~~~G~~l~~~a~v~~--~g----~~ 88 (114)
T TIGR02286 15 FARVAMTVRADMLNGHGTAHGGFLFSLADSAFAYACNSYGDAAVAAQCTIDFLRPGRAGERLEAEAVEVS--RG----GR 88 (114)
T ss_pred EEEEEEECCHHHcCcCCCchHHHHHHHHHHHHHHHhcCCCCceEEEEEEEEEecCCCCCCEEEEEEEEEE--eC----Cc
Confidence 445678888888999999999999999755432221111 2346789999999999999999998877 44 33
Q ss_pred eEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 377 SVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 377 s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
...+.-.+++++|+++|.++.+|..
T Consensus 89 ~~~~~~~i~~~~~~~va~~~~t~~~ 113 (114)
T TIGR02286 89 TGTYDVEVVNQEGELVALFRGTSRR 113 (114)
T ss_pred EEEEEEEEEcCCCCEEEEEEEEEEE
Confidence 3445556777889999999999864
No 41
>COG1607 Acyl-CoA hydrolase [Lipid metabolism]
Probab=96.56 E-value=0.087 Score=47.99 Aligned_cols=107 Identities=17% Similarity=0.151 Sum_probs=80.4
Q ss_pred eeeeeccCCCCccccccchhhHHHHHHHhccH---hhhhccce-EE-EEEEEccCCCCCCeEEEEEEEeecccCcccccc
Q 014795 302 RRGLTPRWSDLDVNQHVNNVKYIGWILESAPQ---QILESHQL-AS-VTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLG 376 (418)
Q Consensus 302 ~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~---e~l~~~~l-~~-~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~ 376 (418)
.....+-.+|++.||-+.--.-+.|+.+++-. .+.....+ .+ =.|+|++|++.||.|.++.++.. .| ++
T Consensus 15 ~~~~lv~P~dtN~~g~ifGG~lm~~mD~~a~i~A~~~a~~~vVTasvd~v~F~~Pv~vGd~v~~~a~v~~--~G----rT 88 (157)
T COG1607 15 VLRTLVMPSDTNPNGTIFGGWLLSWMDLAAAIAASRHAGGRVVTASVDSVDFKKPVRVGDIVCLYARVVY--TG----RT 88 (157)
T ss_pred EEEEEecCCccCcccccccHHHHHHHHHHHHHHHHHHhCCeEEEEEeceEEEccccccCcEEEEEEEEee--cC----cc
Confidence 35667889999999999999999998665432 22233222 22 26899999999999999999988 77 68
Q ss_pred eEEEEEEEEeCC-----CeEEEEEEEEEEEecCCCCCCccCCCCC
Q 014795 377 SVECQHLLRLEE-----GAEVLRARTEWRPKDAHNFGNVGPIPAE 416 (418)
Q Consensus 377 s~~~~h~i~~~d-----G~~va~a~t~w~~~d~~~~~~~~~~~~~ 416 (418)
|+++.-.++.++ ...++.|..+++.+|.+ |...+||.+
T Consensus 89 Sm~V~Vev~~~~~~~~~~~~~t~~~ft~VAvd~~--gkP~~vp~~ 131 (157)
T COG1607 89 SMEVGVEVWAEDIRSGERRLATSAYFTFVAVDED--GKPTPVPRE 131 (157)
T ss_pred cEEEEEEEEEecccCCcceEeeeEEEEEEEECCC--CCcccCCcc
Confidence 888766655443 35677889999999887 777788854
No 42
>PRK11688 hypothetical protein; Provisional
Probab=96.52 E-value=0.092 Score=47.18 Aligned_cols=111 Identities=11% Similarity=0.060 Sum_probs=78.8
Q ss_pred EEEEEeecCccC--CCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChH-HHhhCCcEEEEEEeEEEEeecCCCCCEEE
Q 014795 140 RQNFSIRSYEIG--ADGTASIETLMNHLQETALNHVMTAGLLDAGFGATP-AMAKKNLIWVVTRMQVVVDRYPTWNDVVN 216 (418)
Q Consensus 140 ~~~~~VR~~D~D--~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~-~m~~~gl~WVV~r~~Iey~r~p~~gD~V~ 216 (418)
...++++-..++ +.|.++=..+..+++.+....+....... ..+... +.......-+-++++++|.||.+ |+.|+
T Consensus 40 ~~~l~~~~~~~~n~~~G~vHGG~i~tl~D~a~g~a~~~~~~~~-~~~~~~~~~~~~~~~~vTi~l~i~fl~p~~-g~~l~ 117 (154)
T PRK11688 40 ELSFKMQPELVGNIAQSILHGGVIASVLDVAGGLVCVGGILAR-HEDISEEELRQRLSRLGTIDLRVDYLRPGR-GERFT 117 (154)
T ss_pred EEEeeCCHHHcCCCCcCeeeHHHHHHHHHHHHHHHHHhhcccc-cccccccccccccccceEEEEEEEeeccCC-CCeEE
Confidence 346677777786 68999999999999888765554321100 000000 00011223356799999999996 99999
Q ss_pred EEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 014795 217 VETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (418)
Q Consensus 217 V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~ 253 (418)
++.++.+.++.....+-+|+|. +|+++|+++.+|..
T Consensus 118 a~a~v~~~g~r~~~~~~~i~~~-~g~lvA~a~~t~~v 153 (154)
T PRK11688 118 ATSSVLRAGNKVAVARMELHNE-QGVHIASGTATYLV 153 (154)
T ss_pred EEEEEEEccCCEEEEEEEEECC-CCCEEEEEEEEEEe
Confidence 9999999998877777899985 89999999998863
No 43
>TIGR00369 unchar_dom_1 uncharacterized domain 1. Most proteins containing this domain consist almost entirely of a single copy of this domain. A protein from C. elegans consists of two tandem copies of the domain. The domain is also found as the N-terminal region of an apparent initiation factor eIF-2B alpha subunit of Aquifex aeolicus. The function of the domain is unknown.
Probab=96.30 E-value=0.077 Score=45.02 Aligned_cols=94 Identities=7% Similarity=-0.031 Sum_probs=69.4
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHhh---hh---ccceEEEEEEEccCCCCCCeEEEEEEEeecccCccc
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQI---LE---SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLV 373 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~---l~---~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~ 373 (418)
..+..+.++...++..|.++=.....++..++.... .. ...-.+++++|.+|...| .|.+..++.+ .|
T Consensus 17 ~~~~~~~v~~~~~n~~g~vhGG~l~~l~D~a~~~a~~~~~~~~~~~vt~~l~i~f~~p~~~g-~l~a~a~v~~--~g--- 90 (117)
T TIGR00369 17 FLEATMPVDERTLQPFGSLHGGVSAALADTAGSAAGYLCNSGGQAVVGLELNANHLRPAREG-KVRAIAQVVH--LG--- 90 (117)
T ss_pred EEEEEEEcCHHHcCCcccChHHHHHHHHHHHHHHHHHhhcCCCceEEEEEEEeeeccccCCC-EEEEEEEEEe--cC---
Confidence 456778899988999999999999888744432111 11 123468999999999999 8999888877 55
Q ss_pred ccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 374 NLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 374 ~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
+....+.-.+++++|+++|+++.++.
T Consensus 91 -r~~~~~~~~i~~~~g~~va~~~~t~~ 116 (117)
T TIGR00369 91 -RQTGVAEIEIVDEQGRLCALSRGTTA 116 (117)
T ss_pred -ceEEEEEEEEECCCCCEEEEEEEEEc
Confidence 34444556777889999999998763
No 44
>PLN02864 enoyl-CoA hydratase
Probab=96.29 E-value=0.39 Score=48.37 Aligned_cols=60 Identities=10% Similarity=0.020 Sum_probs=48.5
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCc----EEEEEEEEEECCCCcEEEEEEEEEEEEE
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKN----GMRRDWLIRNAKTGETLTRATSLWVMMN 255 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~----~~~R~f~I~d~~~Gevla~A~S~wV~iD 255 (418)
.|=.+..|+++||+..++.+++++++..+... ....+..+.|..+|+++++..++.++-.
T Consensus 94 lVHgeq~i~~~rPlp~~~~l~~~~~v~~v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg 157 (310)
T PLN02864 94 LLHGQQYIEIYKPIPSSASVRNKVSIAGLHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRG 157 (310)
T ss_pred eeeccceEEEECCCCCCCEEEEEEEEEEEEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeC
Confidence 45568899999999999999999999987322 2466677778558999999998888765
No 45
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=96.25 E-value=0.055 Score=48.56 Aligned_cols=102 Identities=12% Similarity=0.041 Sum_probs=83.3
Q ss_pred EEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEE
Q 014795 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (418)
Q Consensus 139 f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~ 218 (418)
-+.+++|....+++++.++......+.+......+- +......-|-+.++|.|..+...||.|.|+
T Consensus 39 v~ce~kV~~~~~N~~k~LHGG~tAtLvD~i~s~~~~--------------~~~~~~~gvsvdLsvsyL~~AklGe~l~i~ 104 (148)
T KOG3328|consen 39 VSCELKVTPDHLNRFKTLHGGATATLVDLITSAALL--------------MTSGFKPGVSVDLSVSYLSSAKLGEELEIE 104 (148)
T ss_pred EEEEEEeCHHHcCccccccccchhhHHHHHhhHHHH--------------hccCCCCceEEEEEhhhccccCCCCeEEEE
Confidence 355899999999999999999888888877654322 223334567889999999999999999999
Q ss_pred EEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 219 Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
..+.+.||.-...+-+++...+|++++.++-+..+-
T Consensus 105 a~~vr~Gk~la~t~v~l~~K~t~kiia~grhtk~~~ 140 (148)
T KOG3328|consen 105 ATVVRVGKTLAFTDVELRRKSTGKIIAKGRHTKYFR 140 (148)
T ss_pred EEEeecCceEEEEEEEEEEcCCCeEEEecceEEEee
Confidence 999999999887788888877899999887765543
No 46
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.06 E-value=0.25 Score=43.56 Aligned_cols=104 Identities=13% Similarity=0.074 Sum_probs=85.0
Q ss_pred EEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEE
Q 014795 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVE 218 (418)
Q Consensus 139 f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~ 218 (418)
-+..+.+.-....+.|.++=..++.+++.+.........- ....-+-+.++++|.||.+-|+ |+.+
T Consensus 36 ~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~-------------~~~~~~ti~l~i~flr~~~~g~-v~a~ 101 (141)
T COG2050 36 AEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLG-------------VVALAVTLELNINFLRPVKEGD-VTAE 101 (141)
T ss_pred EEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccC-------------ccceeEEEEEEehhccCCCCCe-EEEE
Confidence 3457788888888999999999999999998776664321 1112277899999999999999 9999
Q ss_pred EEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEC
Q 014795 219 TWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNK 256 (418)
Q Consensus 219 Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl 256 (418)
-.+.+.|+.-...+.++++...|++++.++.++..++.
T Consensus 102 a~v~~~G~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 102 ARVLHLGRRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred EEEEeeCCEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 99999999988788899964466999999999998864
No 47
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=95.94 E-value=1.6 Score=41.67 Aligned_cols=190 Identities=16% Similarity=0.106 Sum_probs=99.6
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCC------ceeCCCHHHH
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTR------RLSKMPDEVR 269 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TR------RpvrIP~ev~ 269 (418)
..+..++++|.++...+ .+++++.+.+.||.+..+.-+++. +|+++++|...+..-+.... .....++.+-
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r~Gr~~~~~~v~~~q--~~~~~~~a~~~f~~~~~~~~~~~~~~~~~~~~p~~p 110 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLRDGRSFSTRQVELSQ--DGKVVATATASFGRPEPGPPEPDLPSSLPPPPPPVP 110 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEEESSSEEEEEEEEEE--TTEEEEEEEEEEE--TTT--------CEES------
T ss_pred CceEEEEeEeccccccC-CEEEEEEEeeCCCcEEEEEEEEEE--CCcCEEEEEEEEccCcCCcccccccccccCCCCCCC
Confidence 78999999999999999 999999999999999999888875 68888888877655543321 0101111110
Q ss_pred --Hhhccccc--CCCCC---Cc-cccCCCCCC------CCCCcceeeeeeeccCCCCccccccchhhHHHHHHHhccHhh
Q 014795 270 --QEIEPYFL--NSDPV---VD-EDSRKLPKL------GDSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQI 335 (418)
Q Consensus 270 --e~l~~y~~--~~~p~---~~-~~~~kl~k~------~~~~~~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~ 335 (418)
+....... +..+. +. .+.|..... .. .........=+|+.+-...+ +..-+-++.|.++...
T Consensus 111 ~p~~~~~~~~~~~~~~~~~~~~~~e~R~~~~~~~~~~~~~-~~~~~~~~~W~R~~~~~~~~---~~~~l~~~~D~~~~~~ 186 (255)
T PF13622_consen 111 PPDDCPPQDDFPDGVPPPGFIQFFEMRPVDGAPPNSTSGS-PGGPPELRGWIRLRDPLPDG---DFAALAFLSDAFPPAT 186 (255)
T ss_dssp BGGGSCBGGGCGGSSCCCSCGGCEEEEECSCCHHHHCTTS-T-SSSEEEEEEEESTTT-CT---HHHHHHHHCTCCHHHH
T ss_pred ChhhccccccccccccccccccceEEEecCCCcccccccC-CCCCceEEEEEEeCCCcccc---hHHHHHHHHHhcchhh
Confidence 00000000 00000 00 001111000 00 00111234456666555543 4444777778774433
Q ss_pred hh---c---cc--eEEEEEEEc-cCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEE
Q 014795 336 LE---S---HQ--LASVTLEYR-RECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 336 l~---~---~~--l~~~~I~Y~-~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~ 398 (418)
+. . .. -..++|.|+ .+...++-+.+.+.... ++ +......-.|++++|+++|.+...
T Consensus 187 ~~~~~~~~~~~~~tld~ti~f~~~p~~~~~Wl~~~~~~~~--~~----~Gr~~~~~~l~d~~G~lvA~~~Q~ 252 (255)
T PF13622_consen 187 LRAFSGPEWWFPATLDHTIHFHRLPFDGDEWLLLEARSPR--AG----NGRALMEGRLWDEDGRLVASSRQE 252 (255)
T ss_dssp HHCHTSS--B-EEEEEEEEEECSHCCTTTS-EEEEEEEEE--EE----TTEEEEEEEEEETTS-EEEEEEEE
T ss_pred ccccCCccccccccceeEEEEEeCCccCCceEEEEEEEeE--eC----CCEEEEEEEEECCCCCEEEEEEEE
Confidence 32 1 12 356677763 34334666666554433 22 355666778889999999998754
No 48
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=95.77 E-value=0.13 Score=43.58 Aligned_cols=57 Identities=12% Similarity=0.054 Sum_probs=47.1
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCC--cEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK--NGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk--~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
-..+....+++|.+|...||+|.++.++.+... ........+++ ++|+++++++.+.
T Consensus 68 ~~~~~~~~~~~f~~Pv~~gd~l~~~~~v~~~~~~~~~v~~~~~~~~-~~g~~v~~g~~~~ 126 (128)
T cd03449 68 PGTIYLSQSLRFLRPVFIGDTVTATVTVTEKREDKKRVTLETVCTN-QNGEVVIEGEAVV 126 (128)
T ss_pred ceEEEEEEEEEECCCccCCCEEEEEEEEEEEecCCCEEEEEEEEEe-CCCCEEEEEEEEE
Confidence 356677899999999999999999999998754 56666777888 4899999988764
No 49
>PLN02322 acyl-CoA thioesterase
Probab=95.61 E-value=0.67 Score=42.08 Aligned_cols=102 Identities=7% Similarity=-0.116 Sum_probs=79.5
Q ss_pred EEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEE
Q 014795 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (418)
Q Consensus 140 ~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~T 219 (418)
+..+.|+...+++.|.++=..++.+++.|.. +.... ...+...+-+.+.++|.+|.+.||.|..+-
T Consensus 29 ~~~m~v~~~~~N~~G~vHGGv~atLaDta~g-~A~~~-------------~~~~~~~vTiel~infLrpa~~G~~L~Aea 94 (154)
T PLN02322 29 TGRLPVSPMCCQPFKVLHGGVSALIAESLAS-LGAHM-------------ASGFKRVAGIQLSINHLKSADLGDLVFAEA 94 (154)
T ss_pred EEEEECCHHHcCCCCCccHHHHHHHHHHHHH-HHHhh-------------ccCCCceEEEEEEEEEeccCCCCCEEEEEE
Confidence 3467788888999999999999999986653 22111 112234677999999999999999999999
Q ss_pred EEEEeCCcEEEEEEEEEECC-----CCcEEEEEEEEEEEEE
Q 014795 220 WVSASGKNGMRRDWLIRNAK-----TGETLTRATSLWVMMN 255 (418)
Q Consensus 220 wv~~~gk~~~~R~f~I~d~~-----~Gevla~A~S~wV~iD 255 (418)
.+...|+.....+-+|++.. +|++++.++.+..++.
T Consensus 95 ~vv~~Gr~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~~ 135 (154)
T PLN02322 95 TPVSTGKTIQVWEVKLWKTTDKDKANKILISSSRVTLICNL 135 (154)
T ss_pred EEEecCCCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEcc
Confidence 99999998888888898831 2788999988776553
No 50
>cd03449 R_hydratase (R)-hydratase [(R)-specific enoyl-CoA hydratase] catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. (R)-hydratase contains a hot-dog fold similar to those of thioesterase II, and beta-hydroxydecanoyl-ACP dehydratase, MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit. The active site lies within a substrate-binding tunnel formed by the (R)-hydratase homodimer. A subset of the bacterial (R)-hydratases contain a C-terminal phosphotransacetylase (PTA) domain.
Probab=94.59 E-value=0.29 Score=41.48 Aligned_cols=56 Identities=13% Similarity=0.112 Sum_probs=44.0
Q ss_pred ceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 340 QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 340 ~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
...+.+++|++|++.||.|.+..++.+ .. .+...+.+...+.+++|+++++++.+.
T Consensus 71 ~~~~~~~~f~~Pv~~gd~l~~~~~v~~--~~--~~~~~v~~~~~~~~~~g~~v~~g~~~~ 126 (128)
T cd03449 71 IYLSQSLRFLRPVFIGDTVTATVTVTE--KR--EDKKRVTLETVCTNQNGEVVIEGEAVV 126 (128)
T ss_pred EEEEEEEEECCCccCCCEEEEEEEEEE--Ee--cCCCEEEEEEEEEeCCCCEEEEEEEEE
Confidence 356789999999999999999998876 22 112456777788888899999998753
No 51
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=94.09 E-value=0.024 Score=52.58 Aligned_cols=103 Identities=12% Similarity=-0.018 Sum_probs=81.2
Q ss_pred ecCccCCCC-CcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEe
Q 014795 146 RSYEIGADG-TASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (418)
Q Consensus 146 R~~D~D~~G-hv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~ 224 (418)
-..|+|-.- |+||+.|++=+.-||.+|....|+. ..+...+..-|..-..+.|.|.++.-++..|.|.+...
T Consensus 58 ls~dlDtll~HmnNArYfrElDfAR~~~~~r~~l~-------~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRiI~W 130 (213)
T KOG4366|consen 58 LSTDLDTLLSHMNNARYFRELDFARVNFYCRTGLY-------LMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRIICW 130 (213)
T ss_pred ecchHHHHHHHhhhhHHHHHhhHHHHHHHHHHhHH-------HHHHhcCCCeeechhhhhhhhhcCCCCccceeeEEEEE
Confidence 346666665 9999999999999999999988862 23555666777777788899999999999999999998
Q ss_pred CCcEEEEEEEEEECCCCcEEEEEEEEEEEEE
Q 014795 225 GKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (418)
Q Consensus 225 gk~~~~R~f~I~d~~~Gevla~A~S~wV~iD 255 (418)
....++.+.++....+|=+++-+.+..++.|
T Consensus 131 Dekaiyle~rFv~~sd~fvcala~~kq~l~d 161 (213)
T KOG4366|consen 131 DEKAIYLESRFVILSDGFVCALALTKQVLKD 161 (213)
T ss_pred chhhhhhhhheeeccCceEeehHHHHHHHhc
Confidence 6554444433333458999999999999988
No 52
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=94.08 E-value=0.36 Score=49.22 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=83.4
Q ss_pred CeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEE
Q 014795 136 GFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVV 215 (418)
Q Consensus 136 ~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V 215 (418)
+-.+...+.|...-++..|.+++..+-.++.++....++.. .+--.++-.+.+-|.+|....+.+
T Consensus 330 ~~~~~~t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~---------------~~~niiIE~i~iyflk~vqid~~l 394 (432)
T COG4109 330 GDEYGVTVEVEPQMINSLGTISNGVFTELLTEVVQRVLRKK---------------KKRNIIIENITIYFLKPVQIDSVL 394 (432)
T ss_pred ccccceEEEechhhccccccchHHHHHHHHHHHHHHHHHHh---------------cCCceEEEeeeeeeecceecccEE
Confidence 33455568899999999999999999999999988777642 233467889999999999999999
Q ss_pred EEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 216 NVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 216 ~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
+|...+...||.+...+.+|+. +|.+++.|-...
T Consensus 395 ~I~prIl~~gR~~a~idvei~~--~~~ivaKAiv~~ 428 (432)
T COG4109 395 EIYPRILEEGRKFAKIDVEIYH--DGQIVAKAIVTV 428 (432)
T ss_pred EEeeeeeccccccceeEEEEee--Ccchhhhheeee
Confidence 9999999999999999999997 588888776543
No 53
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=93.89 E-value=0.64 Score=39.99 Aligned_cols=59 Identities=10% Similarity=0.110 Sum_probs=43.8
Q ss_pred ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEE
Q 014795 338 SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 338 ~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~ 398 (418)
...+.+++++|++|++.||+|.+...+.+.... .+...+++...+.+++|++++.++.+
T Consensus 67 ~~~i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~--~~~~~v~~~~~~~nq~g~~v~~g~a~ 125 (127)
T cd03453 67 PGRVVSFGVRFTKPVPVPDTLTCTGIVVEKTVA--DGEDALTVTVDATDQAGGKKVLGRAI 125 (127)
T ss_pred ccceEEEEEEECCcCcCCCEEEEEEEEEEEEec--CCCcEEEEEEEEEEcCCCEEEEEEEE
Confidence 345678899999999999999998888651111 11244677788888999998888754
No 54
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=93.83 E-value=0.93 Score=39.67 Aligned_cols=99 Identities=14% Similarity=0.116 Sum_probs=67.0
Q ss_pred eEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEE
Q 014795 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (418)
Q Consensus 138 ~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V 217 (418)
..+..+..++.-.+..|.++-..+....+-+....+... + ..++.|++..++|+|.+|.+ ..|..
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~laE~~~g~~~~~~------------l-~~~~~~~~k~~~i~f~kpa~--g~v~a 94 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLAEPAYGLLLMSN------------L-GDKYRVWDKSAEIDFLKPAR--GDVTA 94 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHHHCHHHHHHHHH------------S--TTEEEEEEEEEEEE-S-----S-EEE
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHHHHHHHHHHHHh------------C-CCcEEEEEEeeEEEEEeccC--CcEEE
Confidence 445678888899999999999999999999987666531 1 22778889999999999975 45555
Q ss_pred EEEEEE--eC-CcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 218 ETWVSA--SG-KNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 218 ~Twv~~--~g-k~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
+..+.. ++ +........++|. +|+++++++.+|-
T Consensus 95 ~~~~~~e~~~~~~~~~~~v~i~D~-~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 95 TAELTEEQIGERGELTVPVEITDA-DGEVVAEATITWY 131 (132)
T ss_dssp EEE-TCCHCCHEEEEEEEEEEEET-TC-EEEEEEEEEE
T ss_pred EEEcCHHHhCCCcEEEEEEEEEEC-CCCEEEEEEEEEE
Confidence 555554 33 4455566788995 9999999999984
No 55
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=93.72 E-value=2.1 Score=36.44 Aligned_cols=86 Identities=8% Similarity=-0.043 Sum_probs=60.5
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEE
Q 014795 156 ASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLI 235 (418)
Q Consensus 156 v~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I 235 (418)
+.-.-.+.++.+++..+....+. . ...+..+.+.-.+++|.++...||++++++++...+.........+
T Consensus 45 ~Pg~l~iE~~aQ~~~~~~~~~~~---------~-~~~~~~~l~~~~~~kf~~pv~pgd~l~i~~~v~~~~~~~~~~~~~~ 114 (131)
T cd01288 45 MPGVLIIEALAQAAGILGLKSLE---------D-FEGKLVYFAGIDKARFRKPVVPGDQLILEVELLKLRRGIGKFKGKA 114 (131)
T ss_pred CCchHHHHHHHHHHHHHhhhccc---------c-cCCcEEEEeeecccEEccccCCCCEEEEEEEEEEeeCCEEEEEEEE
Confidence 33444667777777655432210 0 1234455566689999999999999999999998877666666677
Q ss_pred EECCCCcEEEEEEEEEEE
Q 014795 236 RNAKTGETLTRATSLWVM 253 (418)
Q Consensus 236 ~d~~~Gevla~A~S~wV~ 253 (418)
+. +|+++++|+...+.
T Consensus 115 ~~--~g~~v~~~~~~~~~ 130 (131)
T cd01288 115 YV--DGKLVAEAELMFAI 130 (131)
T ss_pred EE--CCEEEEEEEEEEEE
Confidence 53 79999999887764
No 56
>PLN02647 acyl-CoA thioesterase
Probab=93.72 E-value=2.1 Score=45.32 Aligned_cols=116 Identities=9% Similarity=0.029 Sum_probs=81.4
Q ss_pred eEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEE
Q 014795 138 IFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNV 217 (418)
Q Consensus 138 ~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V 217 (418)
.-+..+.+...|.+..|.++=+.+|.++.+++.--+.. . ..+..-.+.=-.++|.+|...||.|.+
T Consensus 290 ~~~~~~iv~P~d~N~~g~iFGG~LM~~~De~A~i~A~r-------------~-a~~~~vt~svd~v~F~~PV~vGdil~l 355 (437)
T PLN02647 290 RLENSLICQPQQRNIHGRIFGGFLMRRAFELAFSTAYA-------------F-AGLRPYFLEVDHVDFLRPVDVGDFLRF 355 (437)
T ss_pred ceEEEEEeCccccCCCCcEeHHHHHHHHHHHHHHHHHH-------------H-cCCceEEEEecceEecCccccCcEEEE
Confidence 34556778999999999999999999999988643332 1 122233444557899999999999998
Q ss_pred EEEEEEeC-----CcEEEEEEE--EEEC--CCCcEEEEEEEEEEEEEC-CCCceeCCCHH
Q 014795 218 ETWVSASG-----KNGMRRDWL--IRNA--KTGETLTRATSLWVMMNK-LTRRLSKMPDE 267 (418)
Q Consensus 218 ~Twv~~~g-----k~~~~R~f~--I~d~--~~Gevla~A~S~wV~iDl-~TRRpvrIP~e 267 (418)
+..|...+ +.++..+-. +.+. .+++++..+..++|..|- .+++|+++|+.
T Consensus 356 ~A~V~yt~~~s~g~~~i~veV~v~v~~~~~~~~~~~n~~~fTfva~d~~~~g~p~~Vp~V 415 (437)
T PLN02647 356 KSCVLYTELENSEQPLINVEVVAHVTRPELRSSEVSNTFYFTFTVRPEAAMKNGFKIRNV 415 (437)
T ss_pred EEEEEEEeEEecCceEEEEEEEEEEEcCCCCcceEEEEEEEEEEEeccccCCCCccCCee
Confidence 77666544 444443322 2332 345678899999999886 36788887753
No 57
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=93.59 E-value=0.57 Score=40.02 Aligned_cols=55 Identities=15% Similarity=0.096 Sum_probs=44.0
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCc-EEEEEEEEEECCCCcEEEEEEEEE
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKN-GMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~-~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
..+.+++++|.+|...||+|+++.++.+.... ......++.| ++|+++++++.+.
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~~~~~~~v~~~~~~~n-q~G~~v~~g~a~v 122 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTAKRDDEVVTVELWARN-SEGDHVMAGTATV 122 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEeeccCcEEEEEEEEEc-CCCCEEEeEEEEE
Confidence 44567899999999999999999999876432 5566678888 4899998888653
No 58
>PRK10293 acyl-CoA esterase; Provisional
Probab=93.56 E-value=2.1 Score=37.84 Aligned_cols=95 Identities=11% Similarity=-0.058 Sum_probs=69.8
Q ss_pred ceeeeeeeccCCCCccccccchhhHHHHHHHhc-cHhh---hh-c--cceEEEEEEEccCCCCCCeEEEEEEEeecccCc
Q 014795 299 DYVRRGLTPRWSDLDVNQHVNNVKYIGWILESA-PQQI---LE-S--HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGN 371 (418)
Q Consensus 299 ~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~-~~e~---l~-~--~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~ 371 (418)
.+.+..++++-..+-.+|-++=..+...+ |.+ .... .. . ..-.++.++|.+|.+.| .|.....+.. .|
T Consensus 34 g~~~~~~~v~~~~~n~~G~lHGGv~~tLa-D~a~~~a~~~~~~~~~~~vTiel~infl~p~~~g-~l~a~a~vv~--~G- 108 (136)
T PRK10293 34 DTLEATMPVDSRTKQPFGLLHGGASVVLA-ESIGSVAGYLCTEGEQKVVGLEINANHVRSAREG-RVRGVCKPLH--LG- 108 (136)
T ss_pred CEEEEEEEcCHHHcCCcCcccHHHHHHHH-HHHHHHHHHhcccCCceEEEEEEEeEEecccCCc-eEEEEEEEEe--cC-
Confidence 45677889999899999999999999997 542 1111 11 1 12457888999999988 5777777766 45
Q ss_pred ccccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 372 LVNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 372 ~~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
+....++-.+++++|+++|.++.+|..
T Consensus 109 ---r~~~~~~~~v~d~~g~l~A~~~~t~~i 135 (136)
T PRK10293 109 ---SRHQVWQIEIFDEKGRLCCSSRLTTAI 135 (136)
T ss_pred ---CCEEEEEEEEEeCCCCEEEEEEEEEEE
Confidence 334445667888899999999998864
No 59
>PRK10254 thioesterase; Provisional
Probab=93.44 E-value=2.7 Score=37.30 Aligned_cols=96 Identities=6% Similarity=-0.025 Sum_probs=70.2
Q ss_pred ceeeeeeeccCCCCccccccchhhHHHHHHHhccHhhh----hcc--ceEEEEEEEccCCCCCCeEEEEEEEeecccCcc
Q 014795 299 DYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQIL----ESH--QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNL 372 (418)
Q Consensus 299 ~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l----~~~--~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~ 372 (418)
.+.+..+.++...+-.+|.|+=..+...+..+...... ... .=.++.++|.+|..-| .|.....+.+ .|
T Consensus 34 g~~~~~l~v~~~~~n~~G~vHGGv~~tLaD~a~g~A~~~~~~~g~~~vTiel~in~Lrp~~~g-~l~a~a~vi~--~G-- 108 (137)
T PRK10254 34 DVLEAEMPVDTRTHQPFGLLHGGASAALAETLGSMAGFLMTRDGQCVVGTELNATHHRPVSEG-KVRGVCQPLH--LG-- 108 (137)
T ss_pred CEEEEEEEcCccccCCCCcchHHHHHHHHHHHHHHHHHhhCCCCCeEEEEEEEeEEeccCcCC-eEEEEEEEEe--cC--
Confidence 45677889999999999999999999997444322211 122 2457778899999887 6888777777 45
Q ss_pred cccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 373 VNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 373 ~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
+....++-.+++++|+++|.++.+...
T Consensus 109 --r~~~v~~~~v~d~~g~l~a~~~~t~~i 135 (137)
T PRK10254 109 --RQNQSWEIVVFDEQGRRCCTCRLGTAV 135 (137)
T ss_pred --cCEEEEEEEEEcCCCCEEEEEEEEEEE
Confidence 344455667888899999999887654
No 60
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=93.15 E-value=1.2 Score=40.76 Aligned_cols=61 Identities=11% Similarity=0.010 Sum_probs=47.5
Q ss_pred EEEEeEEEEeecCCCCCEEEEEEEEEEeCC----cEEEEEEEEEECCCCcEEEEEEEEEEEEECCC
Q 014795 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGK----NGMRRDWLIRNAKTGETLTRATSLWVMMNKLT 258 (418)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~V~Twv~~~gk----~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~T 258 (418)
+-...+++|.+|.+.||+|++++.+..... -.......+.| ++|++++++..+++.-+..+
T Consensus 85 v~~~q~~~f~rPV~~GDtL~~~~~V~~~~~~~~~g~V~~~~~~~N-Q~Ge~V~~~~~~~~~~~~~~ 149 (166)
T PRK13691 85 VQVDQRFVFHKPVLAGDKLWARMDIHSVDERFGADIVVTRNVCTN-DDGELVMEAYTTLMGQQGDN 149 (166)
T ss_pred eeeeeEEEEeCCcCCCCEEEEEEEEEEEEEcCCCcEEEEEEEEEC-CCCCEEEEEEEEEEEecCCC
Confidence 445678889999999999999999987632 24566678888 58999999998776665443
No 61
>PF14539 DUF4442: Domain of unknown function (DUF4442); PDB: 1YOC_B 1SH8_B.
Probab=92.95 E-value=1.6 Score=38.24 Aligned_cols=95 Identities=16% Similarity=0.182 Sum_probs=58.2
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhh-----cc--ceEEEEEEEccCCCCCCeEEEEEEEeecccCcc
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILE-----SH--QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNL 372 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~-----~~--~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~ 372 (418)
.....+..+|.-...+|-++-..-+..+ |.+..-.+. ++ .+++++|+|+++.+-+ |...+.+++.+++
T Consensus 30 ~~~v~l~~~~~~~N~~gt~h~gAl~~la-E~~~g~~~~~~l~~~~~~~~k~~~i~f~kpa~g~--v~a~~~~~~e~~~-- 104 (132)
T PF14539_consen 30 RVVVRLPLRPRNRNHVGTIHAGALFTLA-EPAYGLLLMSNLGDKYRVWDKSAEIDFLKPARGD--VTATAELTEEQIG-- 104 (132)
T ss_dssp EEEEEE-S-CCGB-TTSSB-HHHHHHHH-HCHHHHHHHHHS-TTEEEEEEEEEEEE-S---S---EEEEEE-TCCHCC--
T ss_pred EEEEEEcCCccccCcCcchHHHHHHHHH-HHHHHHHHHHhCCCcEEEEEEeeEEEEEeccCCc--EEEEEEcCHHHhC--
Confidence 5567888899888888888888877776 543322221 11 3799999999996654 5555555553343
Q ss_pred cccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 373 VNLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 373 ~~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
.+....+.-.+++++|+++|+++.+|.
T Consensus 105 -~~~~~~~~v~i~D~~G~~Va~~~~t~~ 131 (132)
T PF14539_consen 105 -ERGELTVPVEITDADGEVVAEATITWY 131 (132)
T ss_dssp -HEEEEEEEEEEEETTC-EEEEEEEEEE
T ss_pred -CCcEEEEEEEEEECCCCEEEEEEEEEE
Confidence 134556666788999999999999984
No 62
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=92.92 E-value=0.62 Score=37.48 Aligned_cols=58 Identities=12% Similarity=0.051 Sum_probs=51.1
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
..-+...+++.|.++..-++.+..+..+...++....++-++++. +|++++.+.....
T Consensus 41 ~~~~t~~~~i~F~~~~~~~~~~~~~~~~~~~g~~~~~~~~~i~~~-~G~lva~~~~~~~ 98 (99)
T cd00556 41 SGFASLDHHIYFHRPGDADEWLLYEVESLRDGRSRALRRGRAYQR-DGKLVASATQSFL 98 (99)
T ss_pred CCeeeeEEEEEEcCCCCCCccEEEEEEecccCCCceEEEEEEECC-CCcEEEEEEEeEc
Confidence 345778999999999999999999999999999999888999984 7999999887653
No 63
>cd03455 SAV4209 SAV4209 is a Streptomyces avermitilis protein with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The alpha- and gamma-proteobacterial members of this CD have, in addition to a hot dog fold, an N-terminal extension.
Probab=92.86 E-value=1.1 Score=38.20 Aligned_cols=55 Identities=15% Similarity=0.094 Sum_probs=43.6
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEE
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~ 398 (418)
..+.+++++|++|++.||+|.+..++.+ .. .. ..+++...+++++|+++++++.+
T Consensus 67 ~~~~~~~~rf~~pv~~Gdtl~~~~~v~~--~~--~~-~~v~~~~~~~nq~G~~v~~g~a~ 121 (123)
T cd03455 67 ARVKSFAFRLGAPLYAGDTLRFGGRVTA--KR--DD-EVVTVELWARNSEGDHVMAGTAT 121 (123)
T ss_pred ceEEEEEEEeeccccCCCEEEEEEEEEe--ec--cC-cEEEEEEEEEcCCCCEEEeEEEE
Confidence 4577889999999999999999999876 21 11 15667778888999999988765
No 64
>KOG4366 consensus Predicted thioesterase [General function prediction only]
Probab=92.83 E-value=0.018 Score=53.34 Aligned_cols=90 Identities=21% Similarity=0.173 Sum_probs=63.4
Q ss_pred CCCCcccc-ccchhhHHHHHHHhccHhhhhc-------------cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccc
Q 014795 309 WSDLDVNQ-HVNNVKYIGWILESAPQQILES-------------HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVN 374 (418)
Q Consensus 309 ~sDlD~ng-HVNN~~Yl~w~~e~~~~e~l~~-------------~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~ 374 (418)
-+|+|..- |+||++|++=+ |-++..++.. ....--.+.|+++++.-+...|.+.+.-.+
T Consensus 59 s~dlDtll~HmnNArYfrEl-DfAR~~~~~r~~l~~~lr~~~~~~v~~As~~ryrr~Irpfh~y~v~sRiI~WD------ 131 (213)
T KOG4366|consen 59 STDLDTLLSHMNNARYFREL-DFARVNFYCRTGLYLMLRSKRGPYVQGASVFRYRREIRPFHPYSVSSRIICWD------ 131 (213)
T ss_pred cchHHHHHHHhhhhHHHHHh-hHHHHHHHHHHhHHHHHHhcCCCeeechhhhhhhhhcCCCCccceeeEEEEEc------
Confidence 49999988 99999999985 7777766542 123444567999999988888888775432
Q ss_pred cceEEEEE-EEEeCCCeEEEEEEEEEEEecCC
Q 014795 375 LGSVECQH-LLRLEEGAEVLRARTEWRPKDAH 405 (418)
Q Consensus 375 ~~s~~~~h-~i~~~dG~~va~a~t~w~~~d~~ 405 (418)
+..+-..| .+...||-++|-+.++.+-+|.+
T Consensus 132 ekaiyle~rFv~~sd~fvcala~~kq~l~dts 163 (213)
T KOG4366|consen 132 EKAIYLESRFVILSDGFVCALALTKQVLKDTS 163 (213)
T ss_pred hhhhhhhhheeeccCceEeehHHHHHHHhcCC
Confidence 33332333 34556888999888887777644
No 65
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=92.36 E-value=1.6 Score=37.98 Aligned_cols=53 Identities=17% Similarity=-0.000 Sum_probs=42.8
Q ss_pred EEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCC-CcEEEEEEEE
Q 014795 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKT-GETLTRATSL 250 (418)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~-Gevla~A~S~ 250 (418)
.+.+++++|.+|...||+|+++.++.+........++.+++. + |+++..+...
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~~~~~~~~~~~~nq-~~g~~V~~g~~~ 122 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMVDGRKVIKVEARNE-ETGELVLRGEAE 122 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEeCCeEEEEEEEEEC-CCCCEEEEEEEE
Confidence 345679999999999999999999998755555667888885 5 8888887754
No 66
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=92.19 E-value=1.5 Score=36.86 Aligned_cols=56 Identities=16% Similarity=-0.072 Sum_probs=45.1
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCC----cEEEEEEEEEECCCCcEEEEEEEE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK----NGMRRDWLIRNAKTGETLTRATSL 250 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk----~~~~R~f~I~d~~~Gevla~A~S~ 250 (418)
..+++...+++|.+|.+.||+|+++.++..... ........+.+. +|+++..+...
T Consensus 66 ~~~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~~~~~~v~~~~~~~n~-~g~~v~~g~~~ 125 (127)
T cd03441 66 DGANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPSKGRGVVTVRTEARNQ-GGEVVLSGEAT 125 (127)
T ss_pred ccceeEEeEEEEeCCcCCCCEEEEEEEEEEeeccCCCcEEEEEEEEEeC-CCCEEEEEEEE
Confidence 457788999999999999999999999998743 345666777884 78988876653
No 67
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=92.11 E-value=1.1 Score=38.92 Aligned_cols=55 Identities=13% Similarity=0.100 Sum_probs=40.8
Q ss_pred EEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 345 TLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 345 ~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
+++|++|++.||+|.+...+.+.....+.+...+++...+++++|+++++++.+.
T Consensus 84 ~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~nq~g~~v~~~~~~~ 138 (140)
T cd03446 84 NLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVNQRGEVVQSGEMSL 138 (140)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCEEEEEEEee
Confidence 8999999999999999998865211100112346777788888999999998764
No 68
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=92.02 E-value=2 Score=39.00 Aligned_cols=60 Identities=7% Similarity=0.061 Sum_probs=48.0
Q ss_pred EEeEEEEeecCCCCCEEEEEEEEEEeC----CcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCC
Q 014795 199 TRMQVVVDRYPTWNDVVNVETWVSASG----KNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTR 259 (418)
Q Consensus 199 ~r~~Iey~r~p~~gD~V~V~Twv~~~g----k~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TR 259 (418)
...+++|.+|.+.||+|.++..+.... +-.......+++ ++|++++++.++.+.-..+.+
T Consensus 87 ~~q~~~f~~PV~~GDtL~~~~eV~~~~~~~~~giv~~~~~v~N-q~Ge~V~~~~~~~~~r~~~~~ 150 (159)
T PRK13692 87 VDQVLKFEKPIVAGDKLYCDVYVDSVREAHGTQIIVTKNIVTN-EEGDVVQETYTTLAGRAGEDG 150 (159)
T ss_pred eeeEEEEeCCccCCCEEEEEEEEEEEEEcCCceEEEEEEEEEc-CCCCEEEEEEEEEEEecCCcC
Confidence 447899999999999999999997552 234566778888 589999999999888765544
No 69
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=92.01 E-value=8 Score=33.95 Aligned_cols=86 Identities=8% Similarity=0.026 Sum_probs=58.4
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEE-eEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEE
Q 014795 156 ASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTR-MQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWL 234 (418)
Q Consensus 156 v~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r-~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~ 234 (418)
+.-..+++++-+++..+..... ...+..+++.. -+++|.+|...||+|+++.++...++.....+..
T Consensus 60 ~PG~l~iE~~aQ~~~~~~~~~~------------~~~~~~~~l~gi~~~kF~~pv~pGd~l~i~~~i~~~~~~~v~~~~~ 127 (147)
T PRK00006 60 MPGVLIIEAMAQAAGVLALKSE------------ENKGKLVYFAGIDKARFKRPVVPGDQLILEVELLKQRRGIWKFKGV 127 (147)
T ss_pred CchhHHHHHHHHHHHHHHhcCc------------CcCCcEEEEeeeeEEEEccccCCCCEEEEEEEEEEeeCCEEEEEEE
Confidence 4444566766666654432110 01222334444 4799999999999999999999877666666667
Q ss_pred EEECCCCcEEEEEEEEEEEEE
Q 014795 235 IRNAKTGETLTRATSLWVMMN 255 (418)
Q Consensus 235 I~d~~~Gevla~A~S~wV~iD 255 (418)
++. +|+++++|....++-|
T Consensus 128 ~~~--~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 128 ATV--DGKLVAEAELMFAIRD 146 (147)
T ss_pred EEE--CCEEEEEEEEEEEEEc
Confidence 763 7999999999887644
No 70
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=91.88 E-value=5.7 Score=33.50 Aligned_cols=86 Identities=13% Similarity=-0.018 Sum_probs=63.8
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEE
Q 014795 153 DGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRD 232 (418)
Q Consensus 153 ~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~ 232 (418)
++.+.-..+++++-+++..++...+... . .....+..+.--+++|.++..-||+++++.++...+......+
T Consensus 41 ~p~lPg~~~iE~~aQ~~~~~~~~~~~~~-------~-~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i~~~~~~~~~~~ 112 (131)
T cd00493 41 DPVMPGVLGIEAMAQAAAALAGLLGLGK-------G-NPPRLGYLAGVRKVKFRGPVLPGDTLTLEVELLKVRRGLGKFD 112 (131)
T ss_pred CCCCCcHHHHHHHHHHHHHHHHhccccc-------c-cCCcEEEEEEcceeEECCCcCCCCEEEEEEEEEEeeCCEEEEE
Confidence 3567778888999999888876543210 0 1223344555579999999999999999999998876666666
Q ss_pred EEEEECCCCcEEEEEE
Q 014795 233 WLIRNAKTGETLTRAT 248 (418)
Q Consensus 233 f~I~d~~~Gevla~A~ 248 (418)
..++. +|++++++.
T Consensus 113 ~~~~~--~g~~v~~~~ 126 (131)
T cd00493 113 GRAYV--DGKLVAEAE 126 (131)
T ss_pred EEEEE--CCEEEEEEE
Confidence 77776 599999988
No 71
>PRK13692 (3R)-hydroxyacyl-ACP dehydratase subunit HadA; Provisional
Probab=91.84 E-value=1.5 Score=39.72 Aligned_cols=58 Identities=14% Similarity=0.095 Sum_probs=44.0
Q ss_pred EEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEe
Q 014795 343 SVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPK 402 (418)
Q Consensus 343 ~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~ 402 (418)
..+++|.+|++.||+|.+...+.+.... .+..-+++...+++++|+++++++.+....
T Consensus 88 ~q~~~f~~PV~~GDtL~~~~eV~~~~~~--~~~giv~~~~~v~Nq~Ge~V~~~~~~~~~r 145 (159)
T PRK13692 88 DQVLKFEKPIVAGDKLYCDVYVDSVREA--HGTQIIVTKNIVTNEEGDVVQETYTTLAGR 145 (159)
T ss_pred eeEEEEeCCccCCCEEEEEEEEEEEEEc--CCceEEEEEEEEEcCCCCEEEEEEEEEEEe
Confidence 3689999999999999998888641111 122456788888999999999988777654
No 72
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=91.72 E-value=7.3 Score=34.30 Aligned_cols=100 Identities=14% Similarity=0.077 Sum_probs=69.3
Q ss_pred EEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEE
Q 014795 140 RQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVET 219 (418)
Q Consensus 140 ~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~T 219 (418)
+.+..++. ..+..|.++=..++..+..+.+..+... + ... ..+..-|....+|+|.+|.+- + +.++.
T Consensus 25 ~v~~pl~~-n~N~~G~~hGG~l~tlad~a~~~~~~~~-~--------~~~-~~~~~~vt~~~~i~yl~P~~~-~-~~a~~ 91 (138)
T TIGR02447 25 RLSAPLAA-NINHHGTMFGGSLYTLATLSGWGLLWLR-L--------QEL-GIDGDIVIADSHIRYLAPVTG-D-PVANC 91 (138)
T ss_pred EEEeECCC-CcCCCCceehhHHHHHHHHHHHHHHHHH-H--------HHh-CCCCcEEEEEeeeEEcCCcCC-C-eEEEE
Confidence 34667777 4899999999999999976544322110 0 111 112346788999999999964 3 55555
Q ss_pred EE-------------EEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 220 WV-------------SASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 220 wv-------------~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
.+ .+-||..+..+-+|++ +|+++++++.+++.+
T Consensus 92 ~~~~~~~~~~~~~~l~~~gr~~~~~~~~v~~--~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 92 EAPDLESWEAFLATLQRGGKARVKLEAQISS--DGKLAATFSGEYVAL 137 (138)
T ss_pred EcCCHHHHHHHHHHHHhCCceEEEEEEEEEE--CCEEEEEEEEEEEEe
Confidence 55 3446667667778886 689999999998875
No 73
>cd03453 SAV4209_like SAV4209_like. Similar in sequence to the Streptomyces avermitilis SAV4209 protein, with a hot dog fold that is similar to those of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=91.57 E-value=1.5 Score=37.67 Aligned_cols=52 Identities=10% Similarity=0.080 Sum_probs=41.5
Q ss_pred EEEeEEEEeecCCCCCEEEEEEEEEEeC----CcEEEEEEEEEECCCCcEEEEEEEE
Q 014795 198 VTRMQVVVDRYPTWNDVVNVETWVSASG----KNGMRRDWLIRNAKTGETLTRATSL 250 (418)
Q Consensus 198 V~r~~Iey~r~p~~gD~V~V~Twv~~~g----k~~~~R~f~I~d~~~Gevla~A~S~ 250 (418)
+.++.++|.+|.+.||+|.++.++.+.. +.....+..+++ ++|+++..++..
T Consensus 70 i~~~~~rf~~Pv~~Gdtl~~~~~v~~~~~~~~~~~v~~~~~~~n-q~g~~v~~g~a~ 125 (127)
T cd03453 70 VVSFGVRFTKPVPVPDTLTCTGIVVEKTVADGEDALTVTVDATD-QAGGKKVLGRAI 125 (127)
T ss_pred eEEEEEEECCcCcCCCEEEEEEEEEEEEecCCCcEEEEEEEEEE-cCCCEEEEEEEE
Confidence 3578899999999999999999998652 234566778888 589988887754
No 74
>PRK13691 (3R)-hydroxyacyl-ACP dehydratase subunit HadC; Provisional
Probab=91.55 E-value=1.5 Score=40.09 Aligned_cols=61 Identities=10% Similarity=0.121 Sum_probs=45.2
Q ss_pred EEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCC
Q 014795 343 SVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAH 405 (418)
Q Consensus 343 ~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~ 405 (418)
..+.+|.+|++.||+|.+...+.+ +-...+..-+++...+.+++|+++++++.++..-+..
T Consensus 88 ~q~~~f~rPV~~GDtL~~~~~V~~--~~~~~~~g~V~~~~~~~NQ~Ge~V~~~~~~~~~~~~~ 148 (166)
T PRK13691 88 DQRFVFHKPVLAGDKLWARMDIHS--VDERFGADIVVTRNVCTNDDGELVMEAYTTLMGQQGD 148 (166)
T ss_pred eeEEEEeCCcCCCCEEEEEEEEEE--EEEcCCCcEEEEEEEEECCCCCEEEEEEEEEEEecCC
Confidence 347789999999999999988865 2100112346777788889999999999888765444
No 75
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=91.42 E-value=1.1 Score=39.09 Aligned_cols=51 Identities=16% Similarity=0.010 Sum_probs=41.3
Q ss_pred eEEEEeecCCCCCEEEEEEEEEEeC-------CcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 201 MQVVVDRYPTWNDVVNVETWVSASG-------KNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 201 ~~Iey~r~p~~gD~V~V~Twv~~~g-------k~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
.+++|.+|...||+|.++.++.+.. +-.......+.| ++|++++++..+.+
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~~ 138 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLN-QRGEVVLTFEATVL 138 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEc-CCCCEEEEEEehhe
Confidence 4899999999999999999998763 124566678888 58999999887654
No 76
>cd03446 MaoC_like MoaC_like Similar to the MaoC (monoamine oxidase C) dehydratase regulatory protein but without the N-terminal PutA domain. This protein family has a hot-dog fold similar to that of (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=91.21 E-value=1.3 Score=38.35 Aligned_cols=51 Identities=14% Similarity=0.072 Sum_probs=40.6
Q ss_pred eEEEEeecCCCCCEEEEEEEEEEeCC------cEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 201 MQVVVDRYPTWNDVVNVETWVSASGK------NGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 201 ~~Iey~r~p~~gD~V~V~Twv~~~gk------~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
.+++|.+|.+.||+|.++.++.+... ........++| ++|++++++..+.+
T Consensus 83 ~~~~f~~pv~~GD~l~~~~~v~~~~~~~~~~~~~v~~~~~~~n-q~g~~v~~~~~~~l 139 (140)
T cd03446 83 DNLRFLNPVFIGDTIRAEAEVVEKEEKDGEDAGVVTRRIEVVN-QRGEVVQSGEMSLL 139 (140)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEecccCCCCceEEEEEEEEEc-CCCCEEEEEEEeee
Confidence 48999999999999999999987642 23455567778 58999999887654
No 77
>cd03441 R_hydratase_like (R)-hydratase [(R)-specific enoyl-CoA hydratase]. Catalyzes the hydration of trans-2-enoyl CoA to (R)-3-hydroxyacyl-CoA as part of the PHA (polyhydroxyalkanoate) biosynthetic pathway. The structure of the monomer includes a five-strand antiparallel beta-sheet wrapped around a central alpha helix, referred to as a hot dog fold. The active site lies within a substrate-binding tunnel formed by the homodimer. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and the fatty acid synthase beta subunit.
Probab=91.16 E-value=3.1 Score=34.84 Aligned_cols=58 Identities=19% Similarity=0.160 Sum_probs=42.5
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEE
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~ 398 (418)
..+...+++|++|++.||+|.+..++...... .+...+++.....+++|++++.++.+
T Consensus 68 ~~~~~~~~~f~~Pv~~Gd~l~~~~~v~~~~~~--~~~~~v~~~~~~~n~~g~~v~~g~~~ 125 (127)
T cd03441 68 ANLGSQSVRFLAPVFPGDTLRVEVEVLGKRPS--KGRGVVTVRTEARNQGGEVVLSGEAT 125 (127)
T ss_pred ceeEEeEEEEeCCcCCCCEEEEEEEEEEeecc--CCCcEEEEEEEEEeCCCCEEEEEEEE
Confidence 45789999999999999999999998762100 01234566777777888888887653
No 78
>cd03447 FAS_MaoC FAS_MaoC, the MaoC-like hot dog fold of the fatty acid synthase, beta subunit. Other enzymes with this fold include MaoC dehydratase, Hydratase-Dehydrogenase-Epimerase protein (HDE), and 17-beta-hydroxysteriod dehydrogenase (HSD).
Probab=90.91 E-value=2.1 Score=37.15 Aligned_cols=54 Identities=22% Similarity=0.105 Sum_probs=41.2
Q ss_pred ceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCC-CeEEEEEEEEE
Q 014795 340 QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEE-GAEVLRARTEW 399 (418)
Q Consensus 340 ~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~d-G~~va~a~t~w 399 (418)
.+.+.+++|++|.+.||+|.+..++.+.+ ....++...+.+++ |++++.+..+-
T Consensus 69 ~~~~~~~rf~~PV~~gdtl~~~~~v~~~~------~~~~~~~~~~~nq~~g~~V~~g~~~v 123 (126)
T cd03447 69 RVRSFTASFVGMVLPNDELEVRLEHVGMV------DGRKVIKVEARNEETGELVLRGEAEV 123 (126)
T ss_pred eEEEEEEEEcccCcCCCEEEEEEEEEEEe------CCeEEEEEEEEECCCCCEEEEEEEEE
Confidence 45778999999999999999988876621 23455666677787 88888887654
No 79
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=90.71 E-value=1.4 Score=38.90 Aligned_cols=58 Identities=12% Similarity=-0.017 Sum_probs=42.1
Q ss_pred EEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 344 VTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 344 ~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
-+++|++|++.||+|.+...+.+.......+...+++...+.+++|+++++++.....
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~g~~V~~~~~~~~~ 138 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTNQNGELVASYDILTLV 138 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEecCCCEEEEEEehHee
Confidence 3999999999999999988886621110011234677777888899999999876554
No 80
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=90.27 E-value=1.6 Score=38.07 Aligned_cols=55 Identities=13% Similarity=-0.011 Sum_probs=42.3
Q ss_pred EEEeEEEEeecCCCCCEEEEEEEEEEeCC-------cEEEEEEEEEECCCCcEEEEEEEEEEE
Q 014795 198 VTRMQVVVDRYPTWNDVVNVETWVSASGK-------NGMRRDWLIRNAKTGETLTRATSLWVM 253 (418)
Q Consensus 198 V~r~~Iey~r~p~~gD~V~V~Twv~~~gk-------~~~~R~f~I~d~~~Gevla~A~S~wV~ 253 (418)
+.-.+++|.+|.+.||+|+++..+.+... ........+.+ ++|++++.++.+.++
T Consensus 81 ~~~~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~~ 142 (146)
T cd03451 81 LGYDEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYN-QDGEPVLSFERTALV 142 (146)
T ss_pred cCccEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEEC-CCCCEEEEEEehhEE
Confidence 33348999999999999999999997642 24455567777 589999999876543
No 81
>PLN02322 acyl-CoA thioesterase
Probab=90.00 E-value=8.8 Score=34.86 Aligned_cols=98 Identities=6% Similarity=-0.152 Sum_probs=69.3
Q ss_pred ceeeeeeeccCCCCccccccchhhHHHHHHHhccHhhh-h----ccceEEEEEEEccCCCCCCeEEEEEEEeecccCccc
Q 014795 299 DYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQIL-E----SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLV 373 (418)
Q Consensus 299 ~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l-~----~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~ 373 (418)
.+.+..++++-..+...|-++=..+...+.-+...... . ...=.++.|+|.+|.+.|+.|.....+.. .|
T Consensus 26 G~~~~~m~v~~~~~N~~G~vHGGv~atLaDta~g~A~~~~~~~~~~vTiel~infLrpa~~G~~L~Aea~vv~--~G--- 100 (154)
T PLN02322 26 TRVTGRLPVSPMCCQPFKVLHGGVSALIAESLASLGAHMASGFKRVAGIQLSINHLKSADLGDLVFAEATPVS--TG--- 100 (154)
T ss_pred CEEEEEEECCHHHcCCCCCccHHHHHHHHHHHHHHHHhhccCCCceEEEEEEEEEeccCCCCCEEEEEEEEEe--cC---
Confidence 45667888888889999999999999997333222111 1 12236888999999999999998888877 45
Q ss_pred ccceEEEEEEEEeC------CCeEEEEEEEEEEEe
Q 014795 374 NLGSVECQHLLRLE------EGAEVLRARTEWRPK 402 (418)
Q Consensus 374 ~~~s~~~~h~i~~~------dG~~va~a~t~w~~~ 402 (418)
+....++-.+++. +|+++|.++.+..++
T Consensus 101 -r~~~~~ev~V~~~~~~~~~~~~lva~a~~T~~~~ 134 (154)
T PLN02322 101 -KTIQVWEVKLWKTTDKDKANKILISSSRVTLICN 134 (154)
T ss_pred -CCEEEEEEEEEECCCCcccCCeEEEEEEEEEEEc
Confidence 2333344456652 278999999888554
No 82
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=89.39 E-value=4.3 Score=37.72 Aligned_cols=59 Identities=10% Similarity=-0.062 Sum_probs=46.5
Q ss_pred CcEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEE
Q 014795 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVM 253 (418)
Q Consensus 193 gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~ 253 (418)
+..-+....++.|.+|...||++.++..+.+.++........++ .+|+++++|....+.
T Consensus 123 ~~~~~~~i~~irF~kPV~pGD~L~~ea~v~~~~~~~~~v~~~~~--v~g~~V~ege~~~~~ 181 (185)
T PRK04424 123 AELALTGVANIRFKRPVKLGERVVAKAEVVRKKGNKYIVEVKSY--VGDELVFRGKFIMYR 181 (185)
T ss_pred CcEEEEEeeeEEEccCCCCCCEEEEEEEEEEccCCEEEEEEEEE--ECCEEEEEEEEEEEE
Confidence 44455666799999999999999999999987766554445555 379999999987765
No 83
>cd03451 FkbR2 FkbR2 is a Streptomyces hygroscopicus protein with a hot dog fold that belongs to a conserved family of proteins found in prokaryotes and archaea but not in eukaryotes. FkbR2 has sequence similarity to (R)-specific enoyl-CoA hydratase, the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. The function of FkbR2 is unknown.
Probab=88.82 E-value=2.6 Score=36.73 Aligned_cols=58 Identities=14% Similarity=0.063 Sum_probs=41.8
Q ss_pred EEEEEccCCCCCCeEEEEEEEeecccC-cccccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 344 VTLEYRRECGRDSVLQSLTAVSDKDIG-NLVNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 344 ~~I~Y~~E~~~gd~l~v~t~v~~~~iG-~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
.++.|++|++.||+|.+...+.+..-. ...+..-+++...+.+++|+++++++.+...
T Consensus 84 ~~~~f~~pv~~GDtl~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~g~~V~~~~~~~~~ 142 (146)
T cd03451 84 DEVRFPAPVFHGDTLYAESEVLSKRESKSRPDAGIVTVRTVGYNQDGEPVLSFERTALV 142 (146)
T ss_pred cEEEecCCCCCCCEEEEEEEEEEEecCCCCCCCeEEEEEEEEECCCCCEEEEEEehhEE
Confidence 489999999999999998888752100 0011234567777888899999999876543
No 84
>PRK00006 fabZ (3R)-hydroxymyristoyl-ACP dehydratase; Reviewed
Probab=88.53 E-value=3.3 Score=36.44 Aligned_cols=97 Identities=13% Similarity=0.072 Sum_probs=60.3
Q ss_pred eeeeeeeccCCCCcccccc------chhhHHHHHHHhccHhhhh-----cc--ceEEE-EEEEccCCCCCCeEEEEEEEe
Q 014795 300 YVRRGLTPRWSDLDVNQHV------NNVKYIGWILESAPQQILE-----SH--QLASV-TLEYRRECGRDSVLQSLTAVS 365 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHV------NN~~Yl~w~~e~~~~e~l~-----~~--~l~~~-~I~Y~~E~~~gd~l~v~t~v~ 365 (418)
.......|...+.=.-||- --+..++++..+...-... .. .+..+ +++|+++++.||+|.+...+.
T Consensus 36 ~~~~~~~v~~d~~~~~ghfp~~pi~PG~l~iE~~aQ~~~~~~~~~~~~~~~~~~l~gi~~~kF~~pv~pGd~l~i~~~i~ 115 (147)
T PRK00006 36 SIVAIKNVTINEPFFQGHFPGYPVMPGVLIIEAMAQAAGVLALKSEENKGKLVYFAGIDKARFKRPVVPGDQLILEVELL 115 (147)
T ss_pred EEEEEEEecCCCccccCCCcCCCcCchhHHHHHHHHHHHHHHhcCcCcCCcEEEEeeeeEEEEccccCCCCEEEEEEEEE
Confidence 3445566655554456664 3444566655543321111 11 13333 799999999999999998887
Q ss_pred ecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEec
Q 014795 366 DKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKD 403 (418)
Q Consensus 366 ~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d 403 (418)
. .+ ...+.+...+. .+|+++++|+.+...+|
T Consensus 116 ~--~~----~~~v~~~~~~~-~~g~~v~~~~~~~~~~~ 146 (147)
T PRK00006 116 K--QR----RGIWKFKGVAT-VDGKLVAEAELMFAIRD 146 (147)
T ss_pred E--ee----CCEEEEEEEEE-ECCEEEEEEEEEEEEEc
Confidence 6 22 34455555554 47999999999887654
No 85
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=88.30 E-value=2.4 Score=36.39 Aligned_cols=52 Identities=12% Similarity=0.013 Sum_probs=38.6
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCC-------cEEEEEEEEEECCCCcEEEE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK-------NGMRRDWLIRNAKTGETLTR 246 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk-------~~~~R~f~I~d~~~Gevla~ 246 (418)
..-+-....++|++|++.||+|++++.+..+.. .....+.+++| ++|+++++
T Consensus 73 ~~~vh~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~-~~Ge~v~t 131 (132)
T PF13452_consen 73 TRLVHGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTD-QDGELVAT 131 (132)
T ss_dssp GGEEEEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE--CTTEEEEE
T ss_pred hhEEecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEEC-CCCCEEEe
Confidence 456667899999999999999999999998622 13455678888 48999875
No 86
>COG2050 PaaI HGG motif-containing thioesterase, possibly involved in aromatic compounds catabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=87.90 E-value=12 Score=32.85 Aligned_cols=97 Identities=9% Similarity=0.017 Sum_probs=67.4
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHhhhhcc------ceEEEEEEEccCCCCCCeEEEEEEEeecccCccc
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQILESH------QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLV 373 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~~------~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~ 373 (418)
+.+..+.+.-..+-..|-++=-..+..+..++........ .=.++.|+|.++.+.|+ +.....+.+ .|
T Consensus 35 ~~~~~l~~~~~~~~~~G~~HGG~i~alaD~a~~~a~~~~~~~~~~~~ti~l~i~flr~~~~g~-v~a~a~v~~--~G--- 108 (141)
T COG2050 35 EAEATLPVDPELLNPGGILHGGVIAALADSAAGLAANSLLGVVALAVTLELNINFLRPVKEGD-VTAEARVLH--LG--- 108 (141)
T ss_pred eEEEEeecCHHHcCCCceeeHHHHHHHHHHHHHHHHhhccCccceeEEEEEEehhccCCCCCe-EEEEEEEEe--eC---
Confidence 4556677777777788888888888887444332222211 12478899999999999 888888887 56
Q ss_pred ccceEE-EEEEEEeC-CCeEEEEEEEEEEEecC
Q 014795 374 NLGSVE-CQHLLRLE-EGAEVLRARTEWRPKDA 404 (418)
Q Consensus 374 ~~~s~~-~~h~i~~~-dG~~va~a~t~w~~~d~ 404 (418)
.+.. .+-.++.+ .++++|+++.+|...+.
T Consensus 109 --~~~~v~~i~v~~~~~~~lva~~~~t~~v~~~ 139 (141)
T COG2050 109 --RRVAVVEIEVKNDEGGRLVAKGTGTYAVLRK 139 (141)
T ss_pred --CEEEEEEEEEEECCCCeEEEEEEEEEEEecC
Confidence 3433 34456643 45999999999887654
No 87
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=87.00 E-value=19 Score=31.14 Aligned_cols=86 Identities=9% Similarity=-0.025 Sum_probs=57.7
Q ss_pred cCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEE-eEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEE
Q 014795 156 ASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTR-MQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWL 234 (418)
Q Consensus 156 v~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r-~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~ 234 (418)
+--.-+++++-+++..++... . + .....+....+.. -+++|.++.+.||++++...+..........+..
T Consensus 53 ~Pg~l~iE~~aQ~~~~~~~~~-~-----~---~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~~i~~~~~~~~~~~~~ 123 (140)
T TIGR01750 53 MPGVLIVEALAQAGGVLAILS-L-----G---GEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHAEFLKKRRKIGKFKGE 123 (140)
T ss_pred ChHHHHHHHHHHHHHHHhecc-c-----c---ccCCCCcEEEEeecceeEECCccCCCCEEEEEEEEEEccCCEEEEEEE
Confidence 445557777777776554210 0 0 0011222344445 5999999999999999999999776666666667
Q ss_pred EEECCCCcEEEEEEEEEE
Q 014795 235 IRNAKTGETLTRATSLWV 252 (418)
Q Consensus 235 I~d~~~Gevla~A~S~wV 252 (418)
++. +|+++++|+...+
T Consensus 124 ~~~--~g~~va~~~~~~~ 139 (140)
T TIGR01750 124 ATV--DGKVVAEAEITFA 139 (140)
T ss_pred EEE--CCEEEEEEEEEEE
Confidence 753 7999999988764
No 88
>cd03452 MaoC_C MaoC_C The C-terminal hot dog fold of the MaoC (monoamine oxidase C) dehydratase regulatory protein. Orthologs of MaoC include PaaZ [Escherichia coli] and PaaN [Pseudomonas putida], which are putative ring-opening enzymes involved in phenylacetic acid degradation. The C-terminal domain of MaoC has sequence similarity to (R)-specific enoyl-CoA hydratase,Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. MaoC also has an N-terminal PutA domain like that found in the E. coli PutA proline dehydrogenase and other members of the aldehyde dehydrogenase family.
Probab=86.34 E-value=4 Score=35.92 Aligned_cols=51 Identities=16% Similarity=0.035 Sum_probs=41.0
Q ss_pred eEEEEeecCCCCCEEEEEEEEEEeC--C----cEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 201 MQVVVDRYPTWNDVVNVETWVSASG--K----NGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 201 ~~Iey~r~p~~gD~V~V~Twv~~~g--k----~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
.+++|.+|.+.||+|+++..+.... + ..+.....+.| ++|++++++.....
T Consensus 81 ~~~rf~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~g~~V~~~~~~~~ 137 (142)
T cd03452 81 ENLRFLEPVYPGDTIQVRLTCKRKIPRDGQDYGVVRWDAEVTN-QNGELVASYDILTL 137 (142)
T ss_pred ceEEECCCCCCCCEEEEEEEEEEEeecCCCCcEEEEEEEEEEe-cCCCEEEEEEehHe
Confidence 4999999999999999999999873 1 24566777888 58999999886554
No 89
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=86.02 E-value=5.9 Score=42.17 Aligned_cols=66 Identities=18% Similarity=0.086 Sum_probs=49.4
Q ss_pred EEEEEEeEEEEeecCCCCCEEEEEEEEEEe--CCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCce
Q 014795 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSAS--GKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRL 261 (418)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~--gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRp 261 (418)
+.+....+++|.+|.+.||+|+++.++... ++........++| ++|++++.++.++++-...=.+|
T Consensus 82 ~~~~~~~~~rF~~PV~~GDtl~~~~~V~~~~~~~~~v~~~~~~~n-q~G~~V~~g~~~~l~~~~~~~~~ 149 (466)
T PRK08190 82 GTIYLGQSLRFRRPVRIGDTLTVTVTVREKDPEKRIVVLDCRCTN-QDGEVVITGTAEVIAPTEKVRRP 149 (466)
T ss_pred ceEEEEEEEEEeCCcCCCCEEEEEEEEEEEECCCCEEEEEEEEEe-CCCCEEEEEEEEeeccccccccc
Confidence 345667899999999999999999999865 3334556667788 58999999888776554443333
No 90
>cd01288 FabZ FabZ is a 17kD beta-hydroxyacyl-acyl carrier protein (ACP) dehydratase that primarily catalyzes the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, the third step in the elongation phase of the bacterial/ plastid, type II, fatty-acid biosynthesis pathway.
Probab=84.75 E-value=5.2 Score=33.90 Aligned_cols=52 Identities=12% Similarity=0.036 Sum_probs=39.3
Q ss_pred EEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 342 ASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 342 ~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
.--+++|++++..||.+.+..++.. .+ +..+.+.-.++ .+|+++++|+.+..
T Consensus 78 ~~~~~kf~~pv~pgd~l~i~~~v~~--~~----~~~~~~~~~~~-~~g~~v~~~~~~~~ 129 (131)
T cd01288 78 GIDKARFRKPVVPGDQLILEVELLK--LR----RGIGKFKGKAY-VDGKLVAEAELMFA 129 (131)
T ss_pred eecccEEccccCCCCEEEEEEEEEE--ee----CCEEEEEEEEE-ECCEEEEEEEEEEE
Confidence 3468899999999999999998876 22 34455555554 47999999988765
No 91
>cd03454 YdeM YdeM is a Bacillus subtilis protein that belongs to a family of prokaryotic proteins of unkown function. YdeM has sequence similarity to the hot-dog fold of (R)-specific enoyl-CoA hydratase. Other enzymes with this fold include the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit.
Probab=84.40 E-value=4.7 Score=34.95 Aligned_cols=56 Identities=20% Similarity=0.122 Sum_probs=40.2
Q ss_pred EEEEEccCCCCCCeEEEEEEEeecccC-cccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 344 VTLEYRRECGRDSVLQSLTAVSDKDIG-NLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 344 ~~I~Y~~E~~~gd~l~v~t~v~~~~iG-~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
.+++|++|++.||+|.+..++.+.... ...+..-+++...+.+++|+++++++.+.
T Consensus 81 ~~~~f~~pv~~Gd~l~~~~~v~~~~~~~~~~~~~~v~~~~~~~nq~g~~v~~~~~~~ 137 (140)
T cd03454 81 DELRWPRPVRPGDTLSVEVEVLDKRPSRSRPDRGIVTLRSETLNQRGEVVLTFEATV 137 (140)
T ss_pred eeeEeCCCCCCCCEEEEEEEEEEEeecCCCCCCeEEEEEEEEEcCCCCEEEEEEehh
Confidence 489999999999999999888652110 00112345677778888999999987653
No 92
>PF13452 MaoC_dehydrat_N: N-terminal half of MaoC dehydratase; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1S9C_K 3OML_A 3KHP_A.
Probab=83.79 E-value=4.2 Score=34.82 Aligned_cols=54 Identities=15% Similarity=0.043 Sum_probs=34.9
Q ss_pred eEEEEEEEccCCCCCCeEEEEEEEeecccCcc-cccceEEEEEEEEeCCCeEEEE
Q 014795 341 LASVTLEYRRECGRDSVLQSLTAVSDKDIGNL-VNLGSVECQHLLRLEEGAEVLR 394 (418)
Q Consensus 341 l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~-~~~~s~~~~h~i~~~dG~~va~ 394 (418)
-...+++|.+|++.||.|.+.+.+.+.....+ ....-+++...+++++|+++++
T Consensus 77 h~~~~~~~h~Pl~~Gd~l~~~~~v~~v~~k~g~G~~~~v~~~~~~~~~~Ge~v~t 131 (132)
T PF13452_consen 77 HGEQDIEFHRPLRPGDTLTATSRVTDVYDKRGAGKGVFVTVETEYTDQDGELVAT 131 (132)
T ss_dssp EEEEEEEESS--BSSEEEEEEEEEEEEEEES-TTSEEEEEEEEEEE-CTTEEEEE
T ss_pred ecCcEEEEeCCCCCCCEEEEEEEEEEEEEecCCCCEEEEEEEEEEECCCCCEEEe
Confidence 36799999999999999999988876210000 0112245567778889998875
No 93
>cd00556 Thioesterase_II Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=82.98 E-value=9.6 Score=30.39 Aligned_cols=55 Identities=13% Similarity=0.017 Sum_probs=41.9
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
....++.+.|.++...|+.+.....+.. .| +.....+-.++.++|+++|.+....
T Consensus 43 ~~t~~~~i~F~~~~~~~~~~~~~~~~~~--~g----~~~~~~~~~i~~~~G~lva~~~~~~ 97 (99)
T cd00556 43 FASLDHHIYFHRPGDADEWLLYEVESLR--DG----RSRALRRGRAYQRDGKLVASATQSF 97 (99)
T ss_pred eeeeEEEEEEcCCCCCCccEEEEEEecc--cC----CCceEEEEEEECCCCcEEEEEEEeE
Confidence 3567899999999999999988888876 44 3334445567777899999987654
No 94
>PRK04424 fatty acid biosynthesis transcriptional regulator; Provisional
Probab=82.49 E-value=9.8 Score=35.35 Aligned_cols=54 Identities=7% Similarity=-0.040 Sum_probs=39.5
Q ss_pred eEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 341 LASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 341 l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
....++.|++|+..||+|.+...+.. .+ ...+.+.-.+. .+|+++|+|+...+.
T Consensus 128 ~~i~~irF~kPV~pGD~L~~ea~v~~--~~----~~~~~v~~~~~-v~g~~V~ege~~~~~ 181 (185)
T PRK04424 128 TGVANIRFKRPVKLGERVVAKAEVVR--KK----GNKYIVEVKSY-VGDELVFRGKFIMYR 181 (185)
T ss_pred EEeeeEEEccCCCCCCEEEEEEEEEE--cc----CCEEEEEEEEE-ECCEEEEEEEEEEEE
Confidence 34569999999999999999999876 22 23333333343 579999999887754
No 95
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=82.49 E-value=13 Score=30.60 Aligned_cols=54 Identities=15% Similarity=0.067 Sum_probs=46.6
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
..+..+++.|.++...+..|++++.+.+-||++..|.-.++ ++|+++..+...+
T Consensus 39 ~~~~s~~~~Fl~p~~~~~pv~~~v~~lr~GRs~~~~~V~~~--Q~g~~~~~a~~sf 92 (94)
T cd03445 39 RVPHSLHSYFLRPGDPDQPIEYEVERLRDGRSFATRRVRAV--QNGKVIFTATASF 92 (94)
T ss_pred CCeEEEEEEecCCCCCCCCEEEEEEEEECCCcEEEEEEEEE--ECCEEEEEEEEEE
Confidence 34779999999999999999999999999999999887776 4699888887654
No 96
>KOG3328 consensus HGG motif-containing thioesterase [General function prediction only]
Probab=82.25 E-value=21 Score=32.30 Aligned_cols=96 Identities=13% Similarity=0.067 Sum_probs=67.0
Q ss_pred eeeeeeeccCCCCccccccchhhHHHHHHHhccHh-hhh-----ccceEEEEEEEccCCCCCCeEEEEEEEeecccCccc
Q 014795 300 YVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQ-ILE-----SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLV 373 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e-~l~-----~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~ 373 (418)
.++.+++|.-..++..+-.++-.-.... |.+... .+- .-.-..+.|.|..++..||.|.+...+.+ .|.
T Consensus 38 rv~ce~kV~~~~~N~~k~LHGG~tAtLv-D~i~s~~~~~~~~~~~gvsvdLsvsyL~~AklGe~l~i~a~~vr--~Gk-- 112 (148)
T KOG3328|consen 38 RVSCELKVTPDHLNRFKTLHGGATATLV-DLITSAALLMTSGFKPGVSVDLSVSYLSSAKLGEELEIEATVVR--VGK-- 112 (148)
T ss_pred eEEEEEEeCHHHcCccccccccchhhHH-HHHhhHHHHhccCCCCceEEEEEhhhccccCCCCeEEEEEEEee--cCc--
Confidence 5678899999999998888888777665 443322 221 22467889999999999999999999887 551
Q ss_pred ccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 374 NLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 374 ~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
+-.++-..+.+..+|++++.++-+--.
T Consensus 113 -~la~t~v~l~~K~t~kiia~grhtk~~ 139 (148)
T KOG3328|consen 113 -TLAFTDVELRRKSTGKIIAKGRHTKYF 139 (148)
T ss_pred -eEEEEEEEEEEcCCCeEEEecceEEEe
Confidence 222332333345579999999765443
No 97
>TIGR01750 fabZ beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ. This enzyme, FabZ, shows overlapping substrate specificity with FabA with regard to chain length in fatty acid biosynthesis. FabZ works preferentially on shorter chains and is often designated (3R)-hydroxymyristoyl-[acyl carrier protein] dehydratase, although its actual specificity is broader. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains.
Probab=80.01 E-value=11 Score=32.61 Aligned_cols=94 Identities=10% Similarity=-0.021 Sum_probs=58.1
Q ss_pred eeeeeeeccCCCCcccccc-c-----hhhHHHHHHHhccHhhh---h-------ccceEE-EEEEEccCCCCCCeEEEEE
Q 014795 300 YVRRGLTPRWSDLDVNQHV-N-----NVKYIGWILESAPQQIL---E-------SHQLAS-VTLEYRRECGRDSVLQSLT 362 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngHV-N-----N~~Yl~w~~e~~~~e~l---~-------~~~l~~-~~I~Y~~E~~~gd~l~v~t 362 (418)
.++...+|+-.+.=..||- + -+..++++.+++..-.. . ...+.+ -+++|+++++.||+|.+..
T Consensus 29 ~~~~~~~v~~~~~~f~gHFp~~pv~Pg~l~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~pGd~l~i~~ 108 (140)
T TIGR01750 29 RIVAIKNVTINEPFFQGHFPEKPIMPGVLIVEALAQAGGVLAILSLGGEIGKGKLVYFAGIDKAKFRRPVVPGDQLILHA 108 (140)
T ss_pred EEEEEEEcCCCCCeecCCCcCcCcChHHHHHHHHHHHHHHHheccccccCCCCcEEEEeecceeEECCccCCCCEEEEEE
Confidence 4556677777665567773 2 34456666554321110 0 012344 3899999999999999988
Q ss_pred EEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 363 AVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 363 ~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
.+.. .. +.-..+.-.++ .+|+++|+|+.+..
T Consensus 109 ~i~~--~~----~~~~~~~~~~~-~~g~~va~~~~~~~ 139 (140)
T TIGR01750 109 EFLK--KR----RKIGKFKGEAT-VDGKVVAEAEITFA 139 (140)
T ss_pred EEEE--cc----CCEEEEEEEEE-ECCEEEEEEEEEEE
Confidence 8875 21 23344444454 47999999998653
No 98
>PRK08190 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase; Validated
Probab=79.32 E-value=11 Score=40.23 Aligned_cols=58 Identities=19% Similarity=0.186 Sum_probs=44.6
Q ss_pred eEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEe
Q 014795 341 LASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPK 402 (418)
Q Consensus 341 l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~ 402 (418)
....+++|.+|++.||+|.+..++.+.. .+..-+++...+.+++|++++.++.++...
T Consensus 85 ~~~~~~rF~~PV~~GDtl~~~~~V~~~~----~~~~~v~~~~~~~nq~G~~V~~g~~~~l~~ 142 (466)
T PRK08190 85 YLGQSLRFRRPVRIGDTLTVTVTVREKD----PEKRIVVLDCRCTNQDGEVVITGTAEVIAP 142 (466)
T ss_pred EEEEEEEEeCCcCCCCEEEEEEEEEEEE----CCCCEEEEEEEEEeCCCCEEEEEEEEeecc
Confidence 4668999999999999999998886511 123445677777889999999998776654
No 99
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=75.54 E-value=53 Score=28.42 Aligned_cols=102 Identities=15% Similarity=0.037 Sum_probs=63.9
Q ss_pred EEEEEEeecCccCC------CCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCCC
Q 014795 139 FRQNFSIRSYEIGA------DGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWN 212 (418)
Q Consensus 139 f~~~~~VR~~D~D~------~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~g 212 (418)
-.-...|...|-=. +..+--.-+++.+-+++..++...+... +.+ ......+...--+++|.++..-|
T Consensus 27 ~~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~-~~~-----~~~~~~~l~~~~~~kF~~~v~Pg 100 (138)
T PF07977_consen 27 IVARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGYSGLAE-GTG-----EARKVPFLAGIRNVKFRGPVYPG 100 (138)
T ss_dssp EEEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHHHCCSS-SCC-----CCCEEEEEEEEEEEEE-S-B-TT
T ss_pred EEEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhhccccc-cCC-----CcceEEEeccccEEEECccEeCC
Confidence 33455565555433 3345555677888888877776654310 000 01134667778899999999999
Q ss_pred C-EEEEEEEEEE---eCCcEEEEEEEEEECCCCcEEEEEE
Q 014795 213 D-VVNVETWVSA---SGKNGMRRDWLIRNAKTGETLTRAT 248 (418)
Q Consensus 213 D-~V~V~Twv~~---~gk~~~~R~f~I~d~~~Gevla~A~ 248 (418)
| .++++..+.+ ........+..++- +|+.+++|.
T Consensus 101 ~~~l~~~v~i~~~~~~~~~~~~~~~~~~v--dg~~v~~~~ 138 (138)
T PF07977_consen 101 DKTLRIEVEIKKIRRREGGMAIFDGTAYV--DGELVAEAE 138 (138)
T ss_dssp E-EEEEEEEEEEEEEEETTEEEEEEEEEE--TTEEEEEEE
T ss_pred CcEEEEEEEEEEeecccCCEEEEEEEEEE--CCEEEEEEC
Confidence 9 9999999999 55666667777775 799998874
No 100
>COG4109 Predicted transcriptional regulator containing CBS domains [Transcription]
Probab=74.19 E-value=13 Score=38.31 Aligned_cols=88 Identities=13% Similarity=0.122 Sum_probs=67.4
Q ss_pred eeeccCCCCccccccchhhHHHHHHHhccHhhhhc----cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEE
Q 014795 304 GLTPRWSDLDVNQHVNNVKYIGWILESAPQQILES----HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVE 379 (418)
Q Consensus 304 ~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e~l~~----~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~ 379 (418)
.+.|-..-++.+|-+.|..+.+.+.|..-..+... ..+..+.+-|.+++..++.+.+...+.+ .| +..-.
T Consensus 336 t~~V~P~M~n~~Gtis~gv~~~ll~e~~qr~l~k~~~~niiIE~i~iyflk~vqid~~l~I~prIl~--~g----R~~a~ 409 (432)
T COG4109 336 TVEVEPQMINSLGTISNGVFTELLTEVVQRVLRKKKKRNIIIENITIYFLKPVQIDSVLEIYPRILE--EG----RKFAK 409 (432)
T ss_pred EEEechhhccccccchHHHHHHHHHHHHHHHHHHhcCCceEEEeeeeeeecceecccEEEEeeeeec--cc----cccce
Confidence 36699999999999999999999988754443332 3589999999999999999999999976 45 44445
Q ss_pred EEEEEEeCCCeEEEEEEEE
Q 014795 380 CQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 380 ~~h~i~~~dG~~va~a~t~ 398 (418)
+..+++. +|.++++|-..
T Consensus 410 idvei~~-~~~ivaKAiv~ 427 (432)
T COG4109 410 IDVEIYH-DGQIVAKAIVT 427 (432)
T ss_pred eEEEEee-Ccchhhhheee
Confidence 5566665 46667776543
No 101
>PLN02864 enoyl-CoA hydratase
Probab=72.86 E-value=28 Score=35.12 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=47.1
Q ss_pred EEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEe-CCCeEEEEEEEEEEEecCCCCCCc
Q 014795 342 ASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRL-EEGAEVLRARTEWRPKDAHNFGNV 410 (418)
Q Consensus 342 ~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~-~dG~~va~a~t~w~~~d~~~~~~~ 410 (418)
.+.+|+|++|+..++.+.+.+.+.. +-......-+++...+.+ ++|+++++.+++..+...++||..
T Consensus 97 geq~i~~~rPlp~~~~l~~~~~v~~--v~dkG~ga~v~~~~~~~d~~~Ge~v~t~~st~~~Rg~gg~g~~ 164 (310)
T PLN02864 97 GQQYIEIYKPIPSSASVRNKVSIAG--LHDKGKAAILELETLSYEKDSGELLCMNRSTIFLRGAGGFSNS 164 (310)
T ss_pred ccceEEEECCCCCCCEEEEEEEEEE--EEeCCCcEEEEEEEEEEeCCCCcEEEEEEEEEEEeCCCCCCCC
Confidence 3568899999999999999998876 310001111455555666 479999999998888877666643
No 102
>PF13622 4HBT_3: Thioesterase-like superfamily; PDB: 2PIM_A 3RQB_A 3CJY_A 3RD7_A 3BBJ_B.
Probab=71.66 E-value=51 Score=31.32 Aligned_cols=59 Identities=14% Similarity=0.123 Sum_probs=41.9
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEecCC
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKDAH 405 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d~~ 405 (418)
..+.++.+.|.+++..| .+.+.+...+ .| .++...+.--.++|+++++|...+......
T Consensus 34 ~~~~s~~~~fl~p~~~~-~~~~~v~~~r--~G-----r~~~~~~v~~~q~~~~~~~a~~~f~~~~~~ 92 (255)
T PF13622_consen 34 FDPHSLHVYFLRPVPPG-PVEYRVEVLR--DG-----RSFSTRQVELSQDGKVVATATASFGRPEPG 92 (255)
T ss_dssp SEEEEEEEEESS--BSC-EEEEEEEEEE--ES-----SSEEEEEEEEEETTEEEEEEEEEEE--TTT
T ss_pred CceEEEEeEeccccccC-CEEEEEEEee--CC-----CcEEEEEEEEEECCcCEEEEEEEEccCcCC
Confidence 46999999999999999 9998888876 44 555544433346899999999888776543
No 103
>TIGR02447 yiiD_Cterm thioesterase domain, putative. This family consists of a broadly distributed uncharacterized domain found often as a standalone protein. The member from Shewanella oneidensis, PDB|1T82_A (Forouhar, et al., unpublished) is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an Acetyltransf_1 domain (PFAM model pfam00583). The function of this protein is unknown.
Probab=68.14 E-value=83 Score=27.54 Aligned_cols=95 Identities=11% Similarity=0.037 Sum_probs=60.0
Q ss_pred ceeeeeeeccCCCCccccccchhhHHHHHHHhccHh----hhh------ccceEEEEEEEccCCCCCCeEEEEEEEee--
Q 014795 299 DYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQ----ILE------SHQLASVTLEYRRECGRDSVLQSLTAVSD-- 366 (418)
Q Consensus 299 ~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e----~l~------~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~-- 366 (418)
.+.+..+.++.. +...|=++=..+...+ |.+... .+. .....+++|+|++|..-+ +...+....
T Consensus 22 g~~~v~~pl~~n-~N~~G~~hGG~l~tla-d~a~~~~~~~~~~~~~~~~~~vt~~~~i~yl~P~~~~--~~a~~~~~~~~ 97 (138)
T TIGR02447 22 GELRLSAPLAAN-INHHGTMFGGSLYTLA-TLSGWGLLWLRLQELGIDGDIVIADSHIRYLAPVTGD--PVANCEAPDLE 97 (138)
T ss_pred CEEEEEeECCCC-cCCCCceehhHHHHHH-HHHHHHHHHHHHHHhCCCCcEEEEEeeeEEcCCcCCC--eEEEEEcCCHH
Confidence 345566777775 7788888888888887 443221 111 235778999999999754 443443321
Q ss_pred ---------cccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEe
Q 014795 367 ---------KDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPK 402 (418)
Q Consensus 367 ---------~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~ 402 (418)
..-| +..+.+.-.++ ++|+++|+++-+++..
T Consensus 98 ~~~~~~~~l~~~g----r~~~~~~~~v~-~~~~lvA~~~g~~~~~ 137 (138)
T TIGR02447 98 SWEAFLATLQRGG----KARVKLEAQIS-SDGKLAATFSGEYVAL 137 (138)
T ss_pred HHHHHHHHHHhCC----ceEEEEEEEEE-ECCEEEEEEEEEEEEe
Confidence 0012 34455666677 5789999999888753
No 104
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=67.05 E-value=35 Score=30.68 Aligned_cols=61 Identities=18% Similarity=0.094 Sum_probs=44.4
Q ss_pred ceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEe
Q 014795 340 QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPK 402 (418)
Q Consensus 340 ~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~ 402 (418)
.+..-++.|.+|.+.||+|...+++.+.+.. .+...+...+...+++|++++.+...+...
T Consensus 95 ~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~--~~~G~v~~~~~~~~~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 95 NLGGDEVRFVKPVFPGDTLRARVEVLDKRPS--KSRGLVTLRLETVNQEGELVLTLEATVLVL 155 (159)
T ss_pred eccccceEecCCCCCCCEEEEEEEEEEeeec--CCceEEEEEEEEEccCCcEEEEEEEeEeEe
Confidence 4566789999999999999999988752110 011445667777888898888888777654
No 105
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=66.69 E-value=21 Score=34.52 Aligned_cols=55 Identities=9% Similarity=0.053 Sum_probs=47.6
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
..+..+++.|.++...+..|++++.+.+-||++..|.-.++ ++|++++++...+.
T Consensus 44 ~~~~S~h~~Fl~~~~~~~pv~~~V~~lR~GRs~~~r~V~~~--Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 44 FIPHSLHSYFVRAGDPKKPIIYDVERLRDGRSFITRRVKAV--QHGKTIFTLQASFQ 98 (271)
T ss_pred CCcceeEEEecCCCCCCCCEEEEEEEeeCCCceEEEEEEEE--ECCEEEEEEEEEcc
Confidence 34568999999999999999999999999999999987776 47999988877665
No 106
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=65.41 E-value=29 Score=29.89 Aligned_cols=47 Identities=13% Similarity=0.109 Sum_probs=33.4
Q ss_pred ceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEE
Q 014795 340 QLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRAR 396 (418)
Q Consensus 340 ~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~ 396 (418)
.+...+++|++|++.||+|.+..+... ..+++.-... ++|++++.+.
T Consensus 71 ~~~~~~~rF~~PV~~gDtl~~~~~~~~---------~~v~~~~~~~-~~g~~v~~g~ 117 (122)
T cd03448 71 RFKAIKVRFSSPVFPGETLRTEMWKEG---------NRVIFQTKVV-ERDVVVLSNG 117 (122)
T ss_pred eeEEEEEEEcCCccCCCEEEEEEEEeC---------CEEEEEEEEc-cCCcEEEECC
Confidence 467889999999999999999887532 3455555443 3566666553
No 107
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=65.04 E-value=90 Score=26.78 Aligned_cols=59 Identities=12% Similarity=0.308 Sum_probs=44.7
Q ss_pred CcEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCC-----cEEEEEEEEEECCCCcEEEEEEEEEEE
Q 014795 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK-----NGMRRDWLIRNAKTGETLTRATSLWVM 253 (418)
Q Consensus 193 gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk-----~~~~R~f~I~d~~~Gevla~A~S~wV~ 253 (418)
+..+++..+.++|.++..+.-.+.|+..+..... ..+.....++ ++|+++++++..+-|
T Consensus 69 ~~~~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~~~~~~~~~~~v~~~--q~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 69 DHQFVLTSLDFTFSRFAELDVPADLTVRITCRDRRGGRPRGLRFRVTVS--QGGRVVATASMTFTC 132 (132)
T ss_pred CceEEEEEEEEEEccccccCCCEEEEEEEEeccccCCccceEEEEEEEE--ECCEEEEEEEEEEEC
Confidence 4468999999999999888778887777765322 3555566666 489999999988754
No 108
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=63.16 E-value=1e+02 Score=26.88 Aligned_cols=88 Identities=7% Similarity=-0.112 Sum_probs=59.4
Q ss_pred CCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCCcEEEEEEeEEEEeecCCC-CCEEEEEEEEEEeCC-cEEEE
Q 014795 154 GTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTW-NDVVNVETWVSASGK-NGMRR 231 (418)
Q Consensus 154 Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~-gD~V~V~Twv~~~gk-~~~~R 231 (418)
+.+.-..+++++-+++..+...... ..-.+..++..+.=-+++|+++..- ||.++++........ .....
T Consensus 45 ~~~P~~l~iE~mAQa~a~~~g~~~~--------~~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~~~~~~~~~ 116 (138)
T cd01289 45 GRLPAWVGIEYMAQAIAAHGGLLAR--------QQGNPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQGDSGLGVF 116 (138)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHH--------hcCCCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeeeCCCcEEEE
Confidence 6788888999999987766521110 0001234455555568899988555 999999998887654 55555
Q ss_pred EEEEEECCCCcEEEEEEEEE
Q 014795 232 DWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 232 ~f~I~d~~~Gevla~A~S~w 251 (418)
+-.++- +|+++++|+...
T Consensus 117 ~~~~~v--~~~~va~a~l~~ 134 (138)
T cd01289 117 ECTIED--QGGVLASGRLNV 134 (138)
T ss_pred EEEEEE--CCEEEEEEEEEE
Confidence 556664 689999998753
No 109
>PF03756 AfsA: A-factor biosynthesis hotdog domain; InterPro: IPR005509 The AfsA family are key enzymes in A-factor biosynthesis, which is essential for streptomycin production and resistance. This domain is distantly related to the thioester dehydratase FabZ family and therefore has a Hotdog domain [].
Probab=61.94 E-value=1e+02 Score=26.44 Aligned_cols=61 Identities=13% Similarity=0.083 Sum_probs=40.4
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
..+.+++++|.+.+.++-.+.+...+...... ......+.+.-.+. ++|+.++++...|.|
T Consensus 72 ~~~~~l~~~f~~~~e~~~P~~~~~~~~~~~~~-~~~~~~~~~~v~~~-q~g~~~a~~~~~~tc 132 (132)
T PF03756_consen 72 FVLTSLDFTFSRFAELDVPADLTVRITCRDRR-GGRPRGLRFRVTVS-QGGRVVATASMTFTC 132 (132)
T ss_pred EEEEEEEEEEccccccCCCEEEEEEEEecccc-CCccceEEEEEEEE-ECCEEEEEEEEEEEC
Confidence 35899999999998887777776666542111 01122344444443 489999999999875
No 110
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=60.85 E-value=91 Score=33.41 Aligned_cols=60 Identities=7% Similarity=-0.042 Sum_probs=43.7
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEE-eCCcEEEEEEEEEECCCCcEEEEEEEEEEEEE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSA-SGKNGMRRDWLIRNAKTGETLTRATSLWVMMN 255 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~-~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iD 255 (418)
.++.+.=-+++|.+|...||++++++.+.. ..+.....+-.++ .+|+++++|....++.+
T Consensus 401 lg~LlgI~kvKF~~PV~PGDtL~I~veI~~~~~~giv~f~g~~~--vdGelVaeael~~~v~~ 461 (464)
T PRK13188 401 STYFMKIDKVKFRQKVVPGDTLIFKVELLSPIRRGICQMQGKAY--VNGKLVCEAELMAQIVK 461 (464)
T ss_pred eEEEEeccEEEEcCCCCCCCEEEEEEEEEEEecCCEEEEEEEEE--ECCEEEEEEEEEEEEec
Confidence 344443349999999999999999999876 3333334455565 37999999999887653
No 111
>COG2030 MaoC Acyl dehydratase [Lipid metabolism]
Probab=58.66 E-value=70 Score=28.74 Aligned_cols=60 Identities=10% Similarity=-0.068 Sum_probs=43.7
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCC----cEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGK----NGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk----~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
.+-.+.-..++|.+|.+.||+|.+++++.+... -......+.++ +.|+....+...+.+.
T Consensus 92 ~~~~~g~~~vRF~~PV~~Gdtl~~~~~v~~~~~~~~~G~v~~~~~~~~-~~g~~v~~~~~~~~~~ 155 (159)
T COG2030 92 VGANLGGDEVRFVKPVFPGDTLRARVEVLDKRPSKSRGLVTLRLETVN-QEGELVLTLEATVLVL 155 (159)
T ss_pred eeeeccccceEecCCCCCCCEEEEEEEEEEeeecCCceEEEEEEEEEc-cCCcEEEEEEEeEeEe
Confidence 345566788999999999999999999987531 12223345566 4788888888877654
No 112
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=58.54 E-value=67 Score=28.93 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=39.1
Q ss_pred eEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEec
Q 014795 341 LASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKD 403 (418)
Q Consensus 341 l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d 403 (418)
+.--+..|++++..||.+.+...+...+ ...+....-...-||+++|+|+...+.++
T Consensus 89 ~gid~~kF~~~V~PGd~l~l~~~~~~~~------~~~~~~~~~~a~Vdg~~v~~a~~~~~~~~ 145 (147)
T COG0764 89 LGIDNAKFKRPVLPGDQLELEVKLLKSR------RLGIGKAKGVATVDGKVVAEAELLFAGVE 145 (147)
T ss_pred EEecceeecCccCCCCEEEEEEEEEEec------ccceEEEEEEEEECCEEEEEEEEEEEEee
Confidence 3444789999999999999988876621 12233333333348999999998877553
No 113
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=57.16 E-value=36 Score=38.00 Aligned_cols=56 Identities=18% Similarity=0.128 Sum_probs=40.2
Q ss_pred EEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 344 VTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 344 ~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
.+++|++|++.||+|.+...+.+.......+...+++...+++++|+.+++++...
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~nq~G~~Vl~~~~~~ 659 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVNQNGEPVATYDVLT 659 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEcCCCCEEEEEEEHH
Confidence 48999999999999999988865110000111246777788888999999887643
No 114
>cd03448 HDE_HSD HDE_HSD The R-hydratase-like hot dog fold of the 17-beta-hydroxysteriod dehydrogenase (HSD), and Hydratase-Dehydrogenase-Epimerase (HDE) proteins. Other enzymes with this fold include MaoC dehydratase, and the fatty acid synthase beta subunit.
Probab=56.39 E-value=71 Score=27.41 Aligned_cols=48 Identities=8% Similarity=0.102 Sum_probs=32.8
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEE
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRAT 248 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~ 248 (418)
-.+..+.++|.+|...||+|.++.|.. ++ ... +.+...++|+++..+.
T Consensus 70 ~~~~~~~~rF~~PV~~gDtl~~~~~~~--~~-~v~--~~~~~~~~g~~v~~g~ 117 (122)
T cd03448 70 ARFKAIKVRFSSPVFPGETLRTEMWKE--GN-RVI--FQTKVVERDVVVLSNG 117 (122)
T ss_pred ceeEEEEEEEcCCccCCCEEEEEEEEe--CC-EEE--EEEEEccCCcEEEECC
Confidence 446678999999999999999999854 33 333 3343323677665543
No 115
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=56.10 E-value=33 Score=38.24 Aligned_cols=55 Identities=13% Similarity=0.054 Sum_probs=40.3
Q ss_pred EEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 345 TLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 345 ~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
+++|++|++.||+|.+...+.+-......+...+++...+.+++|+.+++++...
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~nq~G~~V~~~~~~~ 671 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTNQDGELVATYDILT 671 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEECCCCEEEEEEEHH
Confidence 7999999999999999988876210000112346778888889999999987654
No 116
>cd03445 Thioesterase_II_repeat2 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=54.91 E-value=1.2e+02 Score=24.81 Aligned_cols=54 Identities=13% Similarity=0.142 Sum_probs=40.3
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
..+.++.+.|.++...+..+...+.+.. -| .++.....--.++|++++.+...+
T Consensus 39 ~~~~s~~~~Fl~p~~~~~pv~~~v~~lr--~G-----Rs~~~~~V~~~Q~g~~~~~a~~sf 92 (94)
T cd03445 39 RVPHSLHSYFLRPGDPDQPIEYEVERLR--DG-----RSFATRRVRAVQNGKVIFTATASF 92 (94)
T ss_pred CCeEEEEEEecCCCCCCCCEEEEEEEEE--CC-----CcEEEEEEEEEECCEEEEEEEEEE
Confidence 5699999999999999999999888876 34 444433332345799988887655
No 117
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=54.60 E-value=79 Score=26.24 Aligned_cols=57 Identities=12% Similarity=-0.032 Sum_probs=44.9
Q ss_pred EEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
.-.-..+.|.|.+++...|=+..+++....+.-+..-+-+|+++ +|+++|.+....+
T Consensus 47 ~~aSldhsi~Fh~~~~~~~W~l~~~~~~~~~~gr~~~~~~l~~~-~G~LvAs~~Q~~l 103 (104)
T cd03444 47 ASASLDHAIWFHRPFRADDWLLYEQRSPRAGNGRGLVEGRIFTR-DGELVASVAQEGL 103 (104)
T ss_pred ceEeeeEEEEEeCCCCCCceEEEEEECccccCCeeEEEEEEECC-CCCEEEEEEEeee
Confidence 34567888999999988888888888888766666566789995 8999998876543
No 118
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=53.98 E-value=28 Score=29.46 Aligned_cols=35 Identities=14% Similarity=-0.026 Sum_probs=27.9
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcE
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNG 228 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~ 228 (418)
....+.+.+++|.+|...||+|.++.++.+....+
T Consensus 74 ~~~~~~~~~~rF~~PV~~gdtl~~~~~v~~~~~~~ 108 (122)
T PF01575_consen 74 PPARLGRFNVRFRAPVFPGDTLTAEVEVTEKREGK 108 (122)
T ss_dssp ECEEEEEEEEEESS--BTTEEEEEEEEEEEEEEEE
T ss_pred cceEEEEEEEEEeccccCCCEEEEEEEEEEEEEcC
Confidence 35778899999999999999999999999854443
No 119
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=50.83 E-value=1.5e+02 Score=26.41 Aligned_cols=30 Identities=7% Similarity=-0.314 Sum_probs=25.0
Q ss_pred EEEEEEeEEEEeecCCCCCEEEEEEEEEEe
Q 014795 195 IWVVTRMQVVVDRYPTWNDVVNVETWVSAS 224 (418)
Q Consensus 195 ~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~ 224 (418)
+..+...+++|.+|.+.||+|+++..+...
T Consensus 84 ~~~~g~~~~rF~~PV~~GDtl~~~~~V~~~ 113 (149)
T cd03450 84 GVNYGLDKVRFPAPVPVGSRVRGRFTLLSV 113 (149)
T ss_pred EEEeeccEEEeCcceeCCcEEEEEEEEEEE
Confidence 344455689999999999999999999875
No 120
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=48.31 E-value=2e+02 Score=25.70 Aligned_cols=93 Identities=12% Similarity=-0.041 Sum_probs=61.2
Q ss_pred CCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhh-CCcEEEEEEeEEEEeecCCCCC-EEEEEEEEEEeCC----
Q 014795 153 DGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAK-KNLIWVVTRMQVVVDRYPTWND-VVNVETWVSASGK---- 226 (418)
Q Consensus 153 ~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~-~gl~WVV~r~~Iey~r~p~~gD-~V~V~Twv~~~gk---- 226 (418)
+..+--.-.++.|-++...++-..+... .-.. ...+....--.++|+++..-|| ++++++.+.+.+.
T Consensus 49 ~pvmPG~L~iEamaQ~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~kfr~~v~Pgd~~l~~e~~i~~~~~~~~~ 121 (150)
T cd01287 49 DPVMPGSLGLEAMIQLLQFYLIWLGLGT-------GVDNPRFQGAPGGPGEWKYRGQITPHNKKVTYEVHIKEVGRDGPR 121 (150)
T ss_pred CCcCchHHHHHHHHHHHHHHHhhccccc-------ccCcccceeEeccceEEEECccCcCCCEEEEEEEEEEEEEccCCc
Confidence 4445555677777777666654433210 0001 2234445556799999999999 8999999999863
Q ss_pred cEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 227 NGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 227 ~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
.....+-.++- +|+++++|...-|.+
T Consensus 122 ~~~~~~~~~~v--dg~~v~~a~~~~~~~ 147 (150)
T cd01287 122 PYIIADASLWV--DGLRIYEAKDIAVRL 147 (150)
T ss_pred cEEEEEEEEEE--CCEEEEEEEccEEEe
Confidence 45555555664 799999998876654
No 121
>PRK13188 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Reviewed
Probab=47.39 E-value=1.1e+02 Score=32.89 Aligned_cols=98 Identities=12% Similarity=0.040 Sum_probs=60.6
Q ss_pred eeeeeeeccCCCCccccc------cchhhHHHHHHHhccHhhh---hc-----cceEEE-EEEEccCCCCCCeEEEEEEE
Q 014795 300 YVRRGLTPRWSDLDVNQH------VNNVKYIGWILESAPQQIL---ES-----HQLASV-TLEYRRECGRDSVLQSLTAV 364 (418)
Q Consensus 300 ~~~~~i~VR~sDlD~ngH------VNN~~Yl~w~~e~~~~e~l---~~-----~~l~~~-~I~Y~~E~~~gd~l~v~t~v 364 (418)
.......|+.++.=..|| +..+..+++|-.+...-.+ .. ..+..+ +++|++++..||+|.+...+
T Consensus 349 ~i~a~k~Vs~De~ff~GHFPg~PI~PGVL~IEaMAQaagil~~~~~~~~~g~lg~LlgI~kvKF~~PV~PGDtL~I~veI 428 (464)
T PRK13188 349 KIVGIKNVTMNEPFFQGHFPGNPVMPGVLQIEAMAQTGGILVLNTVPDPENYSTYFMKIDKVKFRQKVVPGDTLIFKVEL 428 (464)
T ss_pred EEEEEEEcCCCcHHhhccCCCCCccccHHHHHHHHHHHHHHHhhccCCCCCceEEEEeccEEEEcCCCCCCCEEEEEEEE
Confidence 344556676666545566 4445566666555322111 11 124444 88999999999999999887
Q ss_pred eecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEec
Q 014795 365 SDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPKD 403 (418)
Q Consensus 365 ~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~d 403 (418)
... .. +.-+.+.-.+. .+|+++|+|+......+
T Consensus 429 ~~~-~~----~giv~f~g~~~-vdGelVaeael~~~v~~ 461 (464)
T PRK13188 429 LSP-IR----RGICQMQGKAY-VNGKLVCEAELMAQIVK 461 (464)
T ss_pred EEE-ec----CCEEEEEEEEE-ECCEEEEEEEEEEEEec
Confidence 541 11 23335555555 58999999998876543
No 122
>PF07977 FabA: FabA-like domain; InterPro: IPR013114 Fatty acids biosynthesis occurs by two distinct pathways: in fungi, mammals and mycobacteria, type I or associative fatty-acid biosynthesis (type I FAS) is accomplished by multifunctional proteins in which distinct domains catalyse specific reactions; in plants and most bacteria, type II or dissociative fatty-acid biosynthesis (type II FAS) is accomplished by distinct enzymes []. Both FabZ and FabA catalyse the dehydration of beta-hydroxyacyl acyl carrier protein (ACP) to trans 2-enoyl ACP. However, FabZ and FabA display subtle differences in substrate specificities, whereby FabA is most effective on acyl ACPs of 9-11 carbon atoms in length, while FabZ is less specific. Unlike FabA, FabZ does not function as an isomerase and cannot initiate unsaturated fatty acid biosynthesis. However, only FabZ can act during the elongation of unsaturated fatty acid chains. This enzyme domain has a HotDog fold.; PDB: 3D6X_F 2GLV_J 2GLM_E 2GLP_E 2GLL_C 1U1Z_F 3ESI_A 3AZB_T 3AZA_M 3AZ9_U ....
Probab=47.11 E-value=84 Score=27.16 Aligned_cols=92 Identities=12% Similarity=-0.012 Sum_probs=49.7
Q ss_pred eeeeeeccCCCCccccccchh-hH-----HHHHHHhccHhhhhc-------------cceEEEEEEEccCCCCCC-eEEE
Q 014795 301 VRRGLTPRWSDLDVNQHVNNV-KY-----IGWILESAPQQILES-------------HQLASVTLEYRRECGRDS-VLQS 360 (418)
Q Consensus 301 ~~~~i~VR~sDlD~ngHVNN~-~Y-----l~w~~e~~~~e~l~~-------------~~l~~~~I~Y~~E~~~gd-~l~v 360 (418)
+.....|..++-=..||-++- .| ++.+.+++..-.... ....--.++|++++..|| .+.+
T Consensus 27 ~~a~~~v~~~~~~f~gHFp~~Pv~PGvl~iE~~aQ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~kF~~~v~Pg~~~l~~ 106 (138)
T PF07977_consen 27 IVARKNVTPDEPFFDGHFPGDPVMPGVLLIEAMAQAAGFLAGYSGLAEGTGEARKVPFLAGIRNVKFRGPVYPGDKTLRI 106 (138)
T ss_dssp EEEEEEE-TTSGGGGCSTTTS--B-HHHHHHHHHHHHHHHHHHHCCSSSCCCCCEEEEEEEEEEEEE-S-B-TTE-EEEE
T ss_pred EEEEEEeCCCCCEEEcCCCCCCCCCeEhHHHHHHHHHHhHhhhccccccCCCcceEEEeccccEEEECccEeCCCcEEEE
Confidence 455667777777677888553 33 334434332211111 113455889999999999 8888
Q ss_pred EEEEeecccCcccccceEEEEEEEEeCCCeEEEEEE
Q 014795 361 LTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRAR 396 (418)
Q Consensus 361 ~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~ 396 (418)
...+.. ++ ........+.-.+.. ||+.+|+++
T Consensus 107 ~v~i~~--~~-~~~~~~~~~~~~~~v-dg~~v~~~~ 138 (138)
T PF07977_consen 107 EVEIKK--IR-RREGGMAIFDGTAYV-DGELVAEAE 138 (138)
T ss_dssp EEEEEE--EE-EEETTEEEEEEEEEE-TTEEEEEEE
T ss_pred EEEEEE--ee-cccCCEEEEEEEEEE-CCEEEEEEC
Confidence 887765 11 001233344444443 799999875
No 123
>COG0764 FabA 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases [Lipid metabolism]
Probab=45.98 E-value=2.3e+02 Score=25.55 Aligned_cols=62 Identities=16% Similarity=0.138 Sum_probs=47.5
Q ss_pred cEEEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEEC
Q 014795 194 LIWVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMNK 256 (418)
Q Consensus 194 l~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl 256 (418)
+...+.=-++.|+++..-||.+.++......++..+..-..... -+|++++.|+...+.++.
T Consensus 85 ~~~~~gid~~kF~~~V~PGd~l~l~~~~~~~~~~~~~~~~~~a~-Vdg~~v~~a~~~~~~~~~ 146 (147)
T COG0764 85 LGYFLGIDNAKFKRPVLPGDQLELEVKLLKSRRLGIGKAKGVAT-VDGKVVAEAELLFAGVEK 146 (147)
T ss_pred EEEEEEecceeecCccCCCCEEEEEEEEEEecccceEEEEEEEE-ECCEEEEEEEEEEEEeec
Confidence 66777777899999999999999999999887444433333333 379999999998887653
No 124
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=44.93 E-value=3.2e+02 Score=26.98 Aligned_cols=55 Identities=11% Similarity=0.012 Sum_probs=48.1
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
-++..+++.|.++...+..|+.++...+-||++..|.-..+ ++|+++..+...+-
T Consensus 55 ~~~hSlh~~Fl~pg~~~~pi~y~Ve~lRdGRSfstr~V~a~--Q~g~~if~~~~sF~ 109 (286)
T PRK10526 55 RLVHSFHSYFLRPGDSQKPIIYDVETLRDGNSFSARRVAAI--QNGKPIFYMTASFQ 109 (286)
T ss_pred CCceEEEEEcCCCCCCCCCEEEEEEEEeCCCceEeEEEEEE--ECCEEEEEEEEEec
Confidence 46889999999999999999999999999999999977776 57999988877654
No 125
>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional
Probab=41.33 E-value=84 Score=35.13 Aligned_cols=49 Identities=16% Similarity=0.088 Sum_probs=39.0
Q ss_pred EEEEeecCCCCCEEEEEEEEEEeC--C----cEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 202 QVVVDRYPTWNDVVNVETWVSASG--K----NGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 202 ~Iey~r~p~~gD~V~V~Twv~~~g--k----~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
+++|.+|.+.||+|+++..+.... + .....+..+.+ ++|+++.++....
T Consensus 617 ~~rF~~PV~~GDtl~~~~~V~~~~~~~~~~~~~v~~~~~~~n-q~G~~V~~~~~~~ 671 (675)
T PRK11563 617 NLRFLTPVKPGDTIQVRLTCKRKTPRRQAPYGVVRWDVEVTN-QDGELVATYDILT 671 (675)
T ss_pred eEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEE-CCCCEEEEEEEHH
Confidence 789999999999999999999873 1 23566677888 5899988877643
No 126
>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.
Probab=41.30 E-value=79 Score=35.30 Aligned_cols=50 Identities=14% Similarity=0.003 Sum_probs=39.0
Q ss_pred eEEEEeecCCCCCEEEEEEEEEEeC--C---c-EEEEEEEEEECCCCcEEEEEEEEE
Q 014795 201 MQVVVDRYPTWNDVVNVETWVSASG--K---N-GMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 201 ~~Iey~r~p~~gD~V~V~Twv~~~g--k---~-~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
.+++|.+|.+.||+|+++..+.... + . ....+..+++ ++|+++.++....
T Consensus 604 ~~~rF~~PV~~GDtl~~~~~V~e~~~~~~~~~g~v~~~~~v~n-q~G~~Vl~~~~~~ 659 (663)
T TIGR02278 604 ENLRFLEPVGPGDTIQVRLTVKRKTPRDEKTYGVVEWAAEVVN-QNGEPVATYDVLT 659 (663)
T ss_pred ceEEEcCCCCCCCEEEEEEEEEEEEecCCCCceEEEEEEEEEc-CCCCEEEEEEEHH
Confidence 4899999999999999999998762 1 1 3556677788 5899988877643
No 127
>TIGR00189 tesB acyl-CoA thioesterase II. Subunit: homotetramer.
Probab=39.61 E-value=3e+02 Score=26.42 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=43.7
Q ss_pred ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEE
Q 014795 338 SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWR 400 (418)
Q Consensus 338 ~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~ 400 (418)
...+.++.+.|.++...+..+.+.+.+.. -| .++...+.--.++|++++++...+.
T Consensus 43 ~~~~~S~h~~Fl~~~~~~~pv~~~V~~lR--~G-----Rs~~~r~V~~~Q~g~~~~~a~asf~ 98 (271)
T TIGR00189 43 EFIPHSLHSYFVRAGDPKKPIIYDVERLR--DG-----RSFITRRVKAVQHGKTIFTLQASFQ 98 (271)
T ss_pred CCCcceeEEEecCCCCCCCCEEEEEEEee--CC-----CceEEEEEEEEECCEEEEEEEEEcc
Confidence 45688999999999999999999988876 33 5555444433468999999988776
No 128
>cd00493 FabA_FabZ FabA/Z, beta-hydroxyacyl-acyl carrier protein (ACP)-dehydratases: One of several distinct enzyme types of the dissociative, type II, fatty acid synthase system (found in bacteria and plants) required to complete successive cycles of fatty acid elongation. The third step of the elongation cycle, the dehydration of beta-hydroxyacyl-ACP to trans-2-acyl-ACP, is catalyzed by FabA or FabZ. FabA is bifunctional and catalyzes an additional isomerization reaction of trans-2-acyl-ACP to cis-3-acyl-ACP, an essential reaction to unsaturated fatty acid synthesis. FabZ is the primary dehydratase that participates in the elongation cycles of saturated as well as unsaturated fatty acid biosynthesis, whereas FabA is more active in the dehydration of beta-hydroxydecanoyl-ACP. The FabA structure is homodimeric with two independent active sites located at the dimer interface.
Probab=38.40 E-value=2.3e+02 Score=23.46 Aligned_cols=89 Identities=11% Similarity=-0.033 Sum_probs=54.5
Q ss_pred eeeeeccCCCCccccc------cchhhHHHHHHHhccHhhhhc----------cc-eEEEEEEEccCCCCCCeEEEEEEE
Q 014795 302 RRGLTPRWSDLDVNQH------VNNVKYIGWILESAPQQILES----------HQ-LASVTLEYRRECGRDSVLQSLTAV 364 (418)
Q Consensus 302 ~~~i~VR~sDlD~ngH------VNN~~Yl~w~~e~~~~e~l~~----------~~-l~~~~I~Y~~E~~~gd~l~v~t~v 364 (418)
.....+.-.+.=..|| +=.+.-++++.+++..-.... .. +.--+++|++++..||.+.+...+
T Consensus 22 ~~~~~i~~~~~~~~~hfp~~p~lPg~~~iE~~aQ~~~~~~~~~~~~~~~~~~~~~l~~~~~~kf~~~v~pgd~l~i~~~i 101 (131)
T cd00493 22 VAEKNVTPNEPFFQGHFPGDPVMPGVLGIEAMAQAAAALAGLLGLGKGNPPRLGYLAGVRKVKFRGPVLPGDTLTLEVEL 101 (131)
T ss_pred EEEEecCCCChhhcccCCCCCCCCcHHHHHHHHHHHHHHHHhcccccccCCcEEEEEEcceeEECCCcCCCCEEEEEEEE
Confidence 3445555544434555 455666777766543221110 11 333589999999999999999888
Q ss_pred eecccCcccccceEEEEEEEEeCCCeEEEEEEE
Q 014795 365 SDKDIGNLVNLGSVECQHLLRLEEGAEVLRART 397 (418)
Q Consensus 365 ~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t 397 (418)
.. .+ .....+.-.+.. +|+++++++.
T Consensus 102 ~~--~~----~~~~~~~~~~~~-~g~~v~~~~~ 127 (131)
T cd00493 102 LK--VR----RGLGKFDGRAYV-DGKLVAEAEL 127 (131)
T ss_pred EE--ee----CCEEEEEEEEEE-CCEEEEEEEE
Confidence 76 21 233444545555 6999999984
No 129
>cd03450 NodN NodN (nodulation factor N) contains a single hot dog fold similar to those of the peroxisomal Hydratase-Dehydrogenase-Epimerase (HDE) protein, and the fatty acid synthase beta subunit. Rhizobium and related species form nodules on the roots of their legume hosts, a symbiotic process that requires production of Nod factors, which are signal molecules involved in root hair deformation and meristematic cell division. The nodulation gene products, including NodN, are involved in producing the Nod factors, however the role played by NodN is unclear.
Probab=35.58 E-value=1.9e+02 Score=25.72 Aligned_cols=54 Identities=9% Similarity=-0.077 Sum_probs=32.4
Q ss_pred EEEEEEccCCCCCCeEEEEEEEeecccCccccc-ceEEEEEEEEeC-CCeEEEEEEEE
Q 014795 343 SVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNL-GSVECQHLLRLE-EGAEVLRARTE 398 (418)
Q Consensus 343 ~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~-~s~~~~h~i~~~-dG~~va~a~t~ 398 (418)
..+++|++|++.||+|.+...+.+..-. .+. ..+++...+... .++.+|.++-.
T Consensus 89 ~~~~rF~~PV~~GDtl~~~~~V~~~~~~--~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 144 (149)
T cd03450 89 LDKVRFPAPVPVGSRVRGRFTLLSVEEL--KGGGVQVTLEVTVEIEGEDKPACVAEWI 144 (149)
T ss_pred ccEEEeCcceeCCcEEEEEEEEEEEEEc--CCCeEEEEEEEEEEEeCCCCceEEEEEE
Confidence 3479999999999999998888652100 111 244444444432 24556655433
No 130
>PLN02868 acyl-CoA thioesterase family protein
Probab=35.48 E-value=5.2e+02 Score=26.76 Aligned_cols=54 Identities=11% Similarity=-0.029 Sum_probs=45.3
Q ss_pred EEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEE
Q 014795 197 VVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWV 252 (418)
Q Consensus 197 VV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV 252 (418)
.+..+++.|.++...+..|++++...+-||++..|.-..+ ++|++++.+...+.
T Consensus 182 ~~~s~~~~Fl~~~~~~~pv~~~V~~lr~Grs~~~r~v~~~--Q~g~~~~~~~~sf~ 235 (413)
T PLN02868 182 LVHSLHAYFLLVGDINLPIIYQVERIRDGHNFATRRVDAI--QKGKVIFTLFASFQ 235 (413)
T ss_pred CceEeeeeecCCCCCCCCEEEEEEEEcCCCceEeeEEEEE--ECCeeEEEEeeccc
Confidence 4778999999998888889999999999999999987776 47898887766544
No 131
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=34.70 E-value=4.9e+02 Score=26.20 Aligned_cols=199 Identities=12% Similarity=0.039 Sum_probs=107.4
Q ss_pred EEEEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEEECCCCcEEEEEEEEEEEEE-----CCCCceeCCCHHHHH
Q 014795 196 WVVTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIRNAKTGETLTRATSLWVMMN-----KLTRRLSKMPDEVRQ 270 (418)
Q Consensus 196 WVV~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~iD-----l~TRRpvrIP~ev~e 270 (418)
-++..++.-|.+|-.-.+.|.-.+...+-|+++..|.-..+ ++|++|..+...+-.=+ ..+--.++-|+.+-.
T Consensus 55 r~vhSlh~yFl~pgd~~~pi~y~Ve~lRdG~sfs~rrV~ai--Q~g~~If~~~ASF~~~e~g~eHq~~mP~vp~Pe~~~~ 132 (289)
T COG1946 55 RVVHSLHSYFLRPGDPEQPIIYDVERLRDGRSFSTRRVDAI--QHGKLIFSATASFQVPEEGFEHQETMPAVPPPEGLPS 132 (289)
T ss_pred CCcceehhhhcCCCCcCCceEEEEEeccCCCceEeEEEEEE--ECCEEEEEEEeeccCCCCCchhhhcCCCCCCCccCcc
Confidence 56778888899999999999999999999999988876666 58999998887654311 111111222222111
Q ss_pred ------hhcccc---cCCCCCCcc--ccCCCCCCC--CCCcceeeeeeeccCCCCccccccchhhHHHHHHHhccHh-hh
Q 014795 271 ------EIEPYF---LNSDPVVDE--DSRKLPKLG--DSTADYVRRGLTPRWSDLDVNQHVNNVKYIGWILESAPQQ-IL 336 (418)
Q Consensus 271 ------~l~~y~---~~~~p~~~~--~~~kl~k~~--~~~~~~~~~~i~VR~sDlD~ngHVNN~~Yl~w~~e~~~~e-~l 336 (418)
.+.+.. .......+. ..|.+...+ ...+..-...+-||..+-=.+-..-+..-+.|+.|....+ .+
T Consensus 133 ~~~~~~~~~~~~p~~~~~~~~~~~pie~R~~~~~~~~~~~k~~~~~~vWira~~~~pdd~~~~~~lLay~SD~~ll~tal 212 (289)
T COG1946 133 ETQIAQKLLPHLPEIVRAKFELERPIEIRPVNLTNPFSGDKSSPQQQVWIRARGELPDDPRLHQALLAYLSDFTLLDTAL 212 (289)
T ss_pred hhHHHHhhhhhcchhhhhhhccccceeEEecccCCccccccCCcceeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhhh
Confidence 111000 000000000 011111000 0011111345667766555555555666677765542111 11
Q ss_pred hc---------cceE--EEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEEe
Q 014795 337 ES---------HQLA--SVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRPK 402 (418)
Q Consensus 337 ~~---------~~l~--~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~~ 402 (418)
.. ..++ ...|-|.++++.+|-+........ .. +.+--+.-.+..++|+++|...-+-...
T Consensus 213 ~~Hg~~~~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~--A~----~~rgl~~G~lf~r~G~LiA~~~QEG~~r 283 (289)
T COG1946 213 QPHGLGFLTPGIQVASLDHSMWFHRPFRLDDWLLYAQESPS--AS----GGRGLVRGQLFDRDGQLIASVVQEGLIR 283 (289)
T ss_pred ccCCCccccCcceEeeccceEEEeccccCCCEEEEEeeCCc--cc----CCcceeeeEEEcCCCCEEEEEeeeEEEe
Confidence 11 2233 457999999999997765554332 11 1222234456678999999886655543
No 132
>PF02551 Acyl_CoA_thio: Acyl-CoA thioesterase; InterPro: IPR003703 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH). They consequently have the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. They may also be involved in the metabolic regulation of peroxisome proliferation. Thioesters play a central role in cells as they participate in metabolism, membrane synthesis, signal transduction, and gene regulation. Thioesterases catalyse the hydrolysis of thioesters to the thiol and carboxylic acid components. Many thioesterases have a hot dog fold, including YciA from Escherichia coli and its close sequence homologue HI0827 from Haemophilus influenzae (HiYciA) []. In Helicobacter pylori, YbgC also belongs to the hot-dog family of proteins, with a epsilongamma tetrameric arrangement []. YbgC proteins are bacterial acyl-CoA thioesterases associated with the Tol-Pal system. This system is important for cell envelope integrity and is part of the cell division machinery. However, the E. coli thioesterase II reveals a new tertiary fold: a 'double hot dog'. It has an internal repeat with a basic unit that is structurally similar to the recently described beta-hydroxydecanoyl thiol ester dehydrase []. ; GO: 0016291 acyl-CoA thioesterase activity, 0006637 acyl-CoA metabolic process; PDB: 1C8U_B 1TBU_B 3U0A_B.
Probab=34.19 E-value=2.4e+02 Score=25.06 Aligned_cols=53 Identities=8% Similarity=-0.139 Sum_probs=34.6
Q ss_pred EEEeEEEEeecCCCCCEEEEEEEEEEeCCcEEEEEEEEE-ECCCCcEEEEEEEEE
Q 014795 198 VTRMQVVVDRYPTWNDVVNVETWVSASGKNGMRRDWLIR-NAKTGETLTRATSLW 251 (418)
Q Consensus 198 V~r~~Iey~r~p~~gD~V~V~Twv~~~gk~~~~R~f~I~-d~~~Gevla~A~S~w 251 (418)
-....|=|+|+++.+|-+.-.+.-.........++=+++ + ++|+++|.+....
T Consensus 77 SlDHs~wFHrpfr~ddWlLY~~~sp~A~~~Rgl~~G~~f~~-q~G~Lvas~~QEG 130 (131)
T PF02551_consen 77 SLDHSMWFHRPFRADDWLLYAIESPSASGGRGLVRGRFFDT-QDGELVASVVQEG 130 (131)
T ss_dssp EEEEEEEE-S--BTTS-EEEEEEEEEEETTEEEEEECCEEE-CTTEEEEEEEEEE
T ss_pred ecceeEEEcCCCCCCCCEEEEEEcCccccCcccccCceEec-CCCCEEEEEecCC
Confidence 667888899999999988877776554333333344667 5 5999999876543
No 133
>cd01289 FabA_like Domain of unknown function, appears to be related to a diverse group of beta-hydroxydecanoyl ACP dehydratases (FabA) and beta-hydroxyacyl ACP dehydratases (FabZ). This group appears to lack the conserved active site histidine of FabA and FabZ.
Probab=34.11 E-value=2.1e+02 Score=25.00 Aligned_cols=78 Identities=13% Similarity=0.010 Sum_probs=47.2
Q ss_pred cccchhhHHHHHHHhccHhh--h---hcc-----ceEEE-EEEEccCCCC-CCeEEEEEEEeecccCcccccceEEEEEE
Q 014795 316 QHVNNVKYIGWILESAPQQI--L---ESH-----QLASV-TLEYRRECGR-DSVLQSLTAVSDKDIGNLVNLGSVECQHL 383 (418)
Q Consensus 316 gHVNN~~Yl~w~~e~~~~e~--l---~~~-----~l~~~-~I~Y~~E~~~-gd~l~v~t~v~~~~iG~~~~~~s~~~~h~ 383 (418)
+-+-.+..++++-++...-. + ... .+..+ .++|+++... ||.+.+....... .+ +.-..+.-.
T Consensus 45 ~~~P~~l~iE~mAQa~a~~~g~~~~~~~~~~~~g~l~~i~~~~f~~~v~p~Gd~l~i~~~~~~~-~~----~~~~~~~~~ 119 (138)
T cd01289 45 GRLPAWVGIEYMAQAIAAHGGLLARQQGNPPRPGFLLGSRKYEAHVDRFDLGSTLLIVVAELLQ-GD----SGLGVFECT 119 (138)
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEEEEEEEEEcceeCCCCeeEEEeeeeee-CC----CcEEEEEEE
Confidence 45667777888766643211 1 111 24444 8899999876 9999998776551 11 122233334
Q ss_pred EEeCCCeEEEEEEEEE
Q 014795 384 LRLEEGAEVLRARTEW 399 (418)
Q Consensus 384 i~~~dG~~va~a~t~w 399 (418)
++. +|+++|+|+.+.
T Consensus 120 ~~v-~~~~va~a~l~~ 134 (138)
T cd01289 120 IED-QGGVLASGRLNV 134 (138)
T ss_pred EEE-CCEEEEEEEEEE
Confidence 443 689999998753
No 134
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=33.04 E-value=3.4e+02 Score=23.81 Aligned_cols=52 Identities=12% Similarity=0.003 Sum_probs=35.2
Q ss_pred EEeEEEEeecCCCC-C----EEEEEEEEEEeC--CcEEEEEEEEEECCCCcEEEEEEEEE
Q 014795 199 TRMQVVVDRYPTWN-D----VVNVETWVSASG--KNGMRRDWLIRNAKTGETLTRATSLW 251 (418)
Q Consensus 199 ~r~~Iey~r~p~~g-D----~V~V~Twv~~~g--k~~~~R~f~I~d~~~Gevla~A~S~w 251 (418)
.++.++|.+|...| | +++++..+.... +........+.+ ++++++++|..+.
T Consensus 81 ~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~ 139 (142)
T PRK13693 81 TEYNVRFTAVVPVPNDGKGAELVFNGRVKSVDPESKSVTIALTATT-GGKKIFGRAIASA 139 (142)
T ss_pred EEEEEEecccEECCCCccceEEEEEEEEEEeccCCcEEEEEEEEEE-CCcEEEEEEEEEE
Confidence 47899999999864 3 888888888763 334555556665 3555566665543
No 135
>cd01287 FabA FabA, beta-hydroxydecanoyl-acyl carrier protein (ACP)-dehydratase: Bacterial protein of the type II, fatty acid synthase system that binds ACP and catalyzes both dehydration and isomerization reactions, apparently in the same active site. The FabA structure is a homodimer with two independent active sites located at the dimer interface. Each active site is tunnel-shaped and completely inaccessible to solvent. No metal ions or cofactors are required for ligand binding or catalysis.
Probab=31.24 E-value=2.6e+02 Score=25.02 Aligned_cols=53 Identities=11% Similarity=0.147 Sum_probs=34.2
Q ss_pred EEEEEEccCCCCCC-eEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEE
Q 014795 343 SVTLEYRRECGRDS-VLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 343 ~~~I~Y~~E~~~gd-~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~ 398 (418)
--...|++++..|| +|.+...+.+ ++......-+.+.-.+.. ||+++|+++-.
T Consensus 90 ~~~~kfr~~v~Pgd~~l~~e~~i~~--~~~~~~~~~~~~~~~~~v-dg~~v~~a~~~ 143 (150)
T cd01287 90 PGEWKYRGQITPHNKKVTYEVHIKE--VGRDGPRPYIIADASLWV-DGLRIYEAKDI 143 (150)
T ss_pred ceEEEECccCcCCCEEEEEEEEEEE--EEccCCccEEEEEEEEEE-CCEEEEEEEcc
Confidence 34699999999999 7998888876 320000122333334444 79999998653
No 136
>PF11456 DUF3019: Protein of unknown function (DUF3019); InterPro: IPR021559 This is a bacterial family of uncharacterised proteins.
Probab=29.28 E-value=1.4e+02 Score=25.20 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=27.2
Q ss_pred EEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCC
Q 014795 231 RDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMP 265 (418)
Q Consensus 231 R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP 265 (418)
-.|.++|.++++++|.+......+..++||-.+.|
T Consensus 65 ~~f~L~~~~~~~~la~~~v~V~~~~~k~Rrr~r~p 99 (102)
T PF11456_consen 65 TQFSLRDSDTGQPLAQVKVKVTWVSPKVRRRRRNP 99 (102)
T ss_pred eEEEEEeCCCCcEEEEEEEEEEEeccCcCCccCCC
Confidence 34788888888989988888887767777766654
No 137
>PRK13693 (3R)-hydroxyacyl-ACP dehydratase subunit HadB; Provisional
Probab=28.73 E-value=4e+02 Score=23.33 Aligned_cols=55 Identities=11% Similarity=-0.043 Sum_probs=34.4
Q ss_pred ceEEEEEEEccCCCCC-C----eEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEE
Q 014795 340 QLASVTLEYRRECGRD-S----VLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTE 398 (418)
Q Consensus 340 ~l~~~~I~Y~~E~~~g-d----~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~ 398 (418)
.+.+.++.|++|++.| | ++.+...+.. .. .++..+++.-.++.++++.+.+|..+
T Consensus 79 ~~~~~~~rF~~pv~~g~D~~~~~l~~~~~V~~--~~--~~~~~v~~~~~~~~~~~~~~~~~~~~ 138 (142)
T PRK13693 79 AVTEYNVRFTAVVPVPNDGKGAELVFNGRVKS--VD--PESKSVTIALTATTGGKKIFGRAIAS 138 (142)
T ss_pred ceEEEEEEecccEECCCCccceEEEEEEEEEE--ec--cCCcEEEEEEEEEECCcEEEEEEEEE
Confidence 3567899999999964 4 7777777765 21 12344556555665555555555544
No 138
>COG1946 TesB Acyl-CoA thioesterase [Lipid metabolism]
Probab=28.48 E-value=6.2e+02 Score=25.47 Aligned_cols=136 Identities=16% Similarity=0.144 Sum_probs=83.3
Q ss_pred HHHHHHhhhhhhhcccCCCCCCCcccccccCCccccCCeeEEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCC
Q 014795 99 ITTIFLAAEKQWMMLDWKPRRSDMLVDPFGIGKIVQDGFIFRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGL 178 (418)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl 178 (418)
+...+..+|+.|++ |+=-..+|+.- +...=.+.+-||...-=++-..-+..++-|+.+--.-...-.
T Consensus 147 ~~~~~~~~~~pie~------R~~~~~~~~~~-----~k~~~~~~vWira~~~~pdd~~~~~~lLay~SD~~ll~tal~-- 213 (289)
T COG1946 147 IVRAKFELERPIEI------RPVNLTNPFSG-----DKSSPQQQVWIRARGELPDDPRLHQALLAYLSDFTLLDTALQ-- 213 (289)
T ss_pred hhhhhhccccceeE------EecccCCcccc-----ccCCcceeEEEEcCCCCCCCHHHHHHHHHHhccchhhhhhhc--
Confidence 33445566776642 33334556654 222234567788876666666667777777776543222211
Q ss_pred CccCCCChHHHhhCCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEe-CCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 179 LDAGFGATPAMAKKNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS-GKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 179 ~~~Gfg~~~~m~~~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~-gk~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
.+|.+ +...++.-+=..+.|-|+||.+.+|=+.-.+..... +...+.| =.+++ ++|+++|......++-
T Consensus 214 -~Hg~~----~~~~~~~~aSLDHs~wFhrp~~~ddWlLy~~~sp~A~~~rgl~~-G~lf~-r~G~LiA~~~QEG~~r 283 (289)
T COG1946 214 -PHGLG----FLTPGIQVASLDHSMWFHRPFRLDDWLLYAQESPSASGGRGLVR-GQLFD-RDGQLIASVVQEGLIR 283 (289)
T ss_pred -cCCCc----cccCcceEeeccceEEEeccccCCCEEEEEeeCCcccCCcceee-eEEEc-CCCCEEEEEeeeEEEe
Confidence 11111 124455666678889999999999988777776655 3344444 36777 5999999887777664
No 139
>PF01575 MaoC_dehydratas: MaoC like domain; InterPro: IPR002539 The C terminus of the MaoC protein is found to share similarity with a wide variety of enzymes. All these enzymes contain multiple domains. This domain is found in parts of two enzymes that have been assigned dehydratase activities. A deletion mutant of the C-terminal 271 amino acids in Q02207 from SWISSPROT abolished its 2-enoyl-CoA hydratase activity, suggesting that this region may be a hydratase enzyme []. The maoC gene is part of a operon with maoA which is involved in the synthesis of monoamine oxidase [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3HMJ_H 2UV8_I 2VKZ_G 1PN4_C 1PN2_B 1S9C_K 3OML_A 1Q6W_B 2B3M_A 3K67_B ....
Probab=27.84 E-value=91 Score=26.30 Aligned_cols=28 Identities=14% Similarity=0.250 Sum_probs=23.1
Q ss_pred cceEEEEEEEccCCCCCCeEEEEEEEee
Q 014795 339 HQLASVTLEYRRECGRDSVLQSLTAVSD 366 (418)
Q Consensus 339 ~~l~~~~I~Y~~E~~~gd~l~v~t~v~~ 366 (418)
..+.++++.|++|++.||.|.+..++.+
T Consensus 76 ~~~~~~~~rF~~PV~~gdtl~~~~~v~~ 103 (122)
T PF01575_consen 76 ARLGRFNVRFRAPVFPGDTLTAEVEVTE 103 (122)
T ss_dssp EEEEEEEEEESS--BTTEEEEEEEEEEE
T ss_pred eEEEEEEEEEeccccCCCEEEEEEEEEE
Confidence 4688999999999999999999988865
No 140
>COG3777 Uncharacterized conserved protein [Function unknown]
Probab=26.96 E-value=1.9e+02 Score=28.55 Aligned_cols=172 Identities=16% Similarity=0.163 Sum_probs=101.7
Q ss_pred CCcEEEEEEeEEEEeecCCCCCEEEEEEEEEEe-------CC-cEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeC
Q 014795 192 KNLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS-------GK-NGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSK 263 (418)
Q Consensus 192 ~gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~-------gk-~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvr 263 (418)
....|. .-.+.|.++.+.|++.+..-.+..+ +. .+.++...+. +.|+++.+=+-+.|.-+.. ..
T Consensus 76 ~RRmWa--~G~l~f~~pl~lgqe~t~~e~Iq~i~ek~g~~g~ltfvT~~h~~~--~~~~l~l~Err~ivY~n~~----~s 147 (273)
T COG3777 76 RRRMWA--GGELVFHLPLRLGQEYTCHETIQYIEEKHGRSGELTFVTVPHVYS--SPGQLCLFERRTIVYTNAP----AS 147 (273)
T ss_pred hhhhhc--cceEEEecceecCceeehhHHHHHHHHhcccccceeEEeccceec--cCcceeeeeeeeEEEecCC----CC
Confidence 344553 4567899999999988765554433 22 3445554444 3688888888888877654 22
Q ss_pred CCHHHHHhhcccccCCCCCCccccCCCCCCCCCCcceeeeeeeccCCCCcccccc--chhhHHHHHHHhccH--------
Q 014795 264 MPDEVRQEIEPYFLNSDPVVDEDSRKLPKLGDSTADYVRRGLTPRWSDLDVNQHV--NNVKYIGWILESAPQ-------- 333 (418)
Q Consensus 264 IP~ev~e~l~~y~~~~~p~~~~~~~kl~k~~~~~~~~~~~~i~VR~sDlD~ngHV--NN~~Yl~w~~e~~~~-------- 333 (418)
.|... ... .++ .-+.-|.-.. + -..-+|||-+-.|||. .|.-|..+. |-.|.
T Consensus 148 ~p~~~---------~s~-~~p--~~~w~~~~tp--t---pvllfrYsaltfN~HrIHyD~~Yat~v-EgYpgLVvhGPl~ 209 (273)
T COG3777 148 KPAVK---------MSV-AEP--NGKWLKNFTP--T---PVLLFRYSALTFNGHRIHYDAPYATYV-EGYPGLVVHGPLI 209 (273)
T ss_pred Ccccc---------CCC-CCC--CCchhhcCCC--C---chheeehhhhccCceeeeccCcceeec-cCCCCceecchHH
Confidence 22110 000 001 0111111000 1 1256899999999996 678888886 44331
Q ss_pred -----hhhh---ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEE
Q 014795 334 -----QILE---SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEW 399 (418)
Q Consensus 334 -----e~l~---~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w 399 (418)
+++. ...+++++..=.+|+..++.+.+....+. +.-... -.++ .||.++.+|++.|
T Consensus 210 atlll~~~~~~~pq~~~Rf~fR~L~p~f~~~~lti~~~l~~--------~g~~~~-w~~~-~~~pv~mrarV~~ 273 (273)
T COG3777 210 ATLLLRAFQPFLPQPIRRFRFRNLSPAFPNETLTICGSLSG--------SGGAEL-WTIR-GDGPVAMRARVFF 273 (273)
T ss_pred HHHHHHHhhhhccccchheeccccccccCCCCeeEeeEecC--------CCceEE-EEec-CCcchhheeeecC
Confidence 1111 23489999999999999999998776644 111221 1232 4677888888764
No 141
>PF09500 YiiD_Cterm: Putative thioesterase (yiiD_Cterm); InterPro: IPR012660 This entry consists of a broadly distributed uncharacterised domain found often as a standalone protein. The member from is described from crystallography work as a putative thioesterase. About half of the members of this family are fused to an N-terminal acetyltransferase domain (IPR000182 from INTERPRO). The function of these proteins are unknown. ; PDB: 1T82_C.
Probab=25.81 E-value=4.9e+02 Score=23.33 Aligned_cols=99 Identities=13% Similarity=0.084 Sum_probs=60.6
Q ss_pred EEEEEEeecCccCCCCCcCHHHHHHHHHHHHHHHHHHcCCCccCCCChHHHhhCC--cEEEEEEeEEEEeecCCCCCEEE
Q 014795 139 FRQNFSIRSYEIGADGTASIETLMNHLQETALNHVMTAGLLDAGFGATPAMAKKN--LIWVVTRMQVVVDRYPTWNDVVN 216 (418)
Q Consensus 139 f~~~~~VR~~D~D~~Ghv~~~~yl~~~qeAa~~h~~~lGl~~~Gfg~~~~m~~~g--l~WVV~r~~Iey~r~p~~gD~V~ 216 (418)
+...-..-. -++..|.++=..+...+--+.+..+.-. +.+.| --.||.+.+|+|.+|.. +.++
T Consensus 30 l~~~APL~p-N~N~~~T~FgGSl~slatLaGW~lv~l~------------l~e~~~~~~IVi~~~~i~Y~~Pv~--~d~~ 94 (144)
T PF09500_consen 30 LELSAPLAP-NINHHGTMFGGSLYSLATLAGWGLVWLQ------------LKEAGLNGDIVIADSNIRYLKPVT--GDFT 94 (144)
T ss_dssp EEEE--SGG-GB-TTSSB-HHHHHHHHHHHHHHHHHHH------------HHHHT---EEEEEEEEEEE-S-----S--E
T ss_pred EEEeccCCC-CcCCCCCcchHHHHHHHHHHHHHHHHHH------------HHHhCCCCcEEEEeCceEEcCCCC--CCcE
Confidence 333334433 6788899999999998888887766521 22222 46899999999999996 3355
Q ss_pred EEEEEE-------------EeCCcEEEEEEEEEECCCCcEEEEEEEEEEEE
Q 014795 217 VETWVS-------------ASGKNGMRRDWLIRNAKTGETLTRATSLWVMM 254 (418)
Q Consensus 217 V~Twv~-------------~~gk~~~~R~f~I~d~~~Gevla~A~S~wV~i 254 (418)
..+.+. +-+|..+...-.|++ +|+++++-+..+|.+
T Consensus 95 A~~~~~~~~~~~~~~~~l~~~grari~l~~~i~~--~~~~~a~f~G~yv~l 143 (144)
T PF09500_consen 95 ARCSLPEPEDWERFLQTLARGGRARITLEVEIYS--GGELAAEFTGRYVAL 143 (144)
T ss_dssp EEEE-------S---GGGGCTS-EEEEEEEEEEE--TTEEEEEEEEEEEEE
T ss_pred EEEeccccchhHHHHHHHHcCCcEEEEEEEEEEE--CCEEEEEEEEEEEEE
Confidence 555555 115667777778886 688999999888875
No 142
>PRK10526 acyl-CoA thioesterase II; Provisional
Probab=25.75 E-value=6.5e+02 Score=24.77 Aligned_cols=57 Identities=9% Similarity=0.132 Sum_probs=43.9
Q ss_pred ccceEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeCCCeEEEEEEEEEEE
Q 014795 338 SHQLASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLEEGAEVLRARTEWRP 401 (418)
Q Consensus 338 ~~~l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~dG~~va~a~t~w~~ 401 (418)
...+.++.+.|.++...+..|...+.... -| .++.....--.++|++++.+...+..
T Consensus 54 ~~~~hSlh~~Fl~pg~~~~pi~y~Ve~lR--dG-----RSfstr~V~a~Q~g~~if~~~~sF~~ 110 (286)
T PRK10526 54 ERLVHSFHSYFLRPGDSQKPIIYDVETLR--DG-----NSFSARRVAAIQNGKPIFYMTASFQA 110 (286)
T ss_pred CCCceEEEEEcCCCCCCCCCEEEEEEEEe--CC-----CceEeEEEEEEECCEEEEEEEEEecc
Confidence 46789999999999999998988887766 23 55554444445689999999888763
No 143
>cd03444 Thioesterase_II_repeat1 Thioesterase II (TEII) is thought to regenerate misprimed nonribosomal peptide synthetases (NRPSs) as well as modular polyketide synthases (PKSs) by hydrolyzing acetyl groups bound to the peptidyl carrier protein (PCP) and acyl carrier protein (ACP) domains, respectively. TEII has two tandem asymmetric hot dog folds that are structurally similar to one found in PaaI thioesterase, 4-hydroxybenzoyl-CoA thioesterase (4HBT) and beta-hydroxydecanoyl-ACP dehydratase and thus, the TEII monomer is equivalent to the homodimeric form of the latter three enzymes. Human TEII is expressed in T cells and has been shown to bind the product of the HIV-1 Nef gene.
Probab=20.58 E-value=4.9e+02 Score=21.42 Aligned_cols=74 Identities=15% Similarity=0.113 Sum_probs=44.4
Q ss_pred chhhHHHHHHHhccHhh-hhcc--------c--eEEEEEEEccCCCCCCeEEEEEEEeecccCcccccceEEEEEEEEeC
Q 014795 319 NNVKYIGWILESAPQQI-LESH--------Q--LASVTLEYRRECGRDSVLQSLTAVSDKDIGNLVNLGSVECQHLLRLE 387 (418)
Q Consensus 319 NN~~Yl~w~~e~~~~e~-l~~~--------~--l~~~~I~Y~~E~~~gd~l~v~t~v~~~~iG~~~~~~s~~~~h~i~~~ 387 (418)
-|...+.|+.|...... +..+ . -....|.|..+....+=+........ .+ +.+....-.++++
T Consensus 17 ~~~a~lA~~SD~~~l~~~~~~~~~~~~~~~~~aSldhsi~Fh~~~~~~~W~l~~~~~~~--~~----~gr~~~~~~l~~~ 90 (104)
T cd03444 17 LHAAALAYLSDSLLLGTALRPHGLPLFDASASASLDHAIWFHRPFRADDWLLYEQRSPR--AG----NGRGLVEGRIFTR 90 (104)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCcccCcceEeeeEEEEEeCCCCCCceEEEEEECcc--cc----CCeeEEEEEEECC
Confidence 34566667666644321 1111 1 34567899999887665555554443 33 2444455678888
Q ss_pred CCeEEEEEEEE
Q 014795 388 EGAEVLRARTE 398 (418)
Q Consensus 388 dG~~va~a~t~ 398 (418)
+|+++|.+.-+
T Consensus 91 ~G~LvAs~~Q~ 101 (104)
T cd03444 91 DGELVASVAQE 101 (104)
T ss_pred CCCEEEEEEEe
Confidence 99999987643
No 144
>PHA02582 10 baseplate wedge subunit and tail pin; Provisional
Probab=20.19 E-value=1.8e+02 Score=31.66 Aligned_cols=72 Identities=13% Similarity=0.037 Sum_probs=49.9
Q ss_pred CcEEEEEEeEEEEeecCCCCCEEEEEEEEEEe---CCcEEEEEEEEEECCCCcEEEEEEEEEEEEECCCCceeCCC
Q 014795 193 NLIWVVTRMQVVVDRYPTWNDVVNVETWVSAS---GKNGMRRDWLIRNAKTGETLTRATSLWVMMNKLTRRLSKMP 265 (418)
Q Consensus 193 gl~WVV~r~~Iey~r~p~~gD~V~V~Twv~~~---gk~~~~R~f~I~d~~~Gevla~A~S~wV~iDl~TRRpvrIP 265 (418)
+-.-.|--..|+++.|...||+|.|.|+..++ +.++.+|.-+|+|.. -......-.....-|+.|.+...+.
T Consensus 218 g~l~~LdG~~Irlr~pc~~gDtv~i~ty~dgia~~RSsY~~~~i~v~d~~-~t~~~s~pG~~~v~dl~t~~~~t~~ 292 (604)
T PHA02582 218 GELVPLDGKSIRLRQPCNAGDTVQIVTYMDGIASWRSSYNRRTIRVYDTK-LTTKTSVPGEIWVGDLSTKKSFTFA 292 (604)
T ss_pred CceeccCCceeEeecccCCCCeEEEEEeecchhhhhhhheeeeEEEEecC-cccccccCCcEEEeeccccccccHH
Confidence 33455667789999999999999999999987 445667778888852 2222233333345688888877654
Done!