BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014798
(418 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O80860|FTSH2_ARATH ATP-dependent zinc metalloprotease FTSH 2, chloroplastic
OS=Arabidopsis thaliana GN=FTSH2 PE=1 SV=1
Length = 695
Score = 647 bits (1669), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/398 (85%), Positives = 361/398 (90%), Gaps = 8/398 (2%)
Query: 1 MEASSACLVGNILTTH-KTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLS-QKQH 58
M ASSACLVGN L+ + TK LSK F GR +SF S+ + KV VVKASL +K+
Sbjct: 1 MAASSACLVGNGLSVNTTTKQRLSKHFSGRQ----TSFSSVIRTSKVNVVKASLDGKKKQ 56
Query: 59 EGRRGFLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFEN 118
EGRR FLK L+GN GVG L+ SGKA ADEQGVSSSRMSYSRFLEYLDKDRV KVDL+EN
Sbjct: 57 EGRRDFLKILLGNAGVG--LVASGKANADEQGVSSSRMSYSRFLEYLDKDRVNKVDLYEN 114
Query: 119 GTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIG 178
GTIAIVEA+SPELGNRV+RVRVQLPGLSQELLQK R KNIDFAAHNAQED GS+LFNLIG
Sbjct: 115 GTIAIVEAVSPELGNRVERVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSVLFNLIG 174
Query: 179 NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDE 238
NLAFP +LIGGLFLLSRRS GGMGGPGGPG PL FGQSKAKFQMEPNTGVTFDDVAGVDE
Sbjct: 175 NLAFPALLIGGLFLLSRRSGGGMGGPGGPGNPLQFGQSKAKFQMEPNTGVTFDDVAGVDE 234
Query: 239 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 298
AKQDFMEVVEFLKKPERFTA+GA+IPKGVLL+GPPGTGKTLLAKAIAGEAGVPFFSISGS
Sbjct: 235 AKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGS 294
Query: 299 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 358
EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL
Sbjct: 295 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 354
Query: 359 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
TEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDRQV
Sbjct: 355 TEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQV 392
>sp|Q8W585|FTSH8_ARATH ATP-dependent zinc metalloprotease FTSH 8, chloroplastic
OS=Arabidopsis thaliana GN=FTSH8 PE=1 SV=1
Length = 685
Score = 633 bits (1632), Expect = e-180, Method: Compositional matrix adjust.
Identities = 334/398 (83%), Positives = 351/398 (88%), Gaps = 15/398 (3%)
Query: 1 MEASSACLVGNILTTHKTKTNLSKDFHGRHLLFNSSFRSLEKKPKVAVVKASLSQKQHEG 60
M ASSACL+GN L+ + TK K L++ KV VVKASL +K+HEG
Sbjct: 1 MAASSACLLGNGLSVYTTKQRFQK-------------LGLDRTSKVTVVKASLDEKKHEG 47
Query: 61 RRGFLKKLVGNVGVGTALLGSGKAYADE--QGVSSSRMSYSRFLEYLDKDRVKKVDLFEN 118
RRGF K L+GN G LL SG A ADE QGVSSSRMSYSRFLEYLDK RV+KVDL+EN
Sbjct: 48 RRGFFKLLLGNAAAGVGLLASGNANADEQGQGVSSSRMSYSRFLEYLDKGRVEKVDLYEN 107
Query: 119 GTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIG 178
GTIAIVEA+SPELGNR+QRVRVQLPGLSQELLQK R KNIDFAAHNAQED GS + NLIG
Sbjct: 108 GTIAIVEAVSPELGNRIQRVRVQLPGLSQELLQKLRAKNIDFAAHNAQEDQGSPILNLIG 167
Query: 179 NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDE 238
NLAFP+ILIGGLFLLSRRSSGGMGGPGGPGFPL GQSKAKFQMEPNTGVTFDDVAGVDE
Sbjct: 168 NLAFPVILIGGLFLLSRRSSGGMGGPGGPGFPLQIGQSKAKFQMEPNTGVTFDDVAGVDE 227
Query: 239 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 298
AKQDFMEVVEFLKKPERFTA+GARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS
Sbjct: 228 AKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 287
Query: 299 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 358
EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL
Sbjct: 288 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 347
Query: 359 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
TEMDGFEGNTG+IV+AATNRADILDSALLRPGRFDRQV
Sbjct: 348 TEMDGFEGNTGVIVVAATNRADILDSALLRPGRFDRQV 385
>sp|Q655S1|FTSH2_ORYSJ ATP-dependent zinc metalloprotease FTSH 2, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH2 PE=3 SV=1
Length = 676
Score = 586 bits (1510), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/349 (91%), Positives = 331/349 (94%), Gaps = 1/349 (0%)
Query: 49 VKASLSQKQHEGRRGFLKKLVGNVGVG-TALLGSGKAYADEQGVSSSRMSYSRFLEYLDK 107
V ASL K ++ RR FLK +GN+GVG LLG+ +A A+EQGVSSSRMSYSRFLEYLDK
Sbjct: 31 VTASLEHKTNDARRKFLKLALGNLGVGLPTLLGAKRALAEEQGVSSSRMSYSRFLEYLDK 90
Query: 108 DRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQE 167
DRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK REKNIDFAAH+ QE
Sbjct: 91 DRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKLREKNIDFAAHSNQE 150
Query: 168 DSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTG 227
DSGSLLFNLIGNLAFPLILIGGLFLLSRR+ GG+GGP GPGFPL FGQS+AKFQMEPNTG
Sbjct: 151 DSGSLLFNLIGNLAFPLILIGGLFLLSRRAQGGLGGPNGPGFPLGFGQSRAKFQMEPNTG 210
Query: 228 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGE 287
VTFDDVAGVDEAKQDFMEVVEFLKKPERFTA+GARIPKGVLLVGPPGTGKTLLAKAIAGE
Sbjct: 211 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 270
Query: 288 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 347
AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN
Sbjct: 271 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 330
Query: 348 DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV
Sbjct: 331 DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 379
>sp|O78516|FTSH_GUITH ATP-dependent zinc metalloprotease FtsH OS=Guillardia theta GN=ftsH
PE=3 SV=1
Length = 631
Score = 476 bits (1226), Expect = e-133, Method: Compositional matrix adjust.
Identities = 233/308 (75%), Positives = 266/308 (86%), Gaps = 5/308 (1%)
Query: 89 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQE 148
+ ++SSRM+Y RFLEYLD VKKVDL++ G AIVEAI PELGNR+QR+RV+LP + E
Sbjct: 36 KNIASSRMTYGRFLEYLDLGWVKKVDLYDEGHTAIVEAIGPELGNRIQRIRVELPATAPE 95
Query: 149 LLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPG 208
L+ K R+ N+D AH + + + ++LIGNL FP++LI GL L RRSS PGGPG
Sbjct: 96 LITKLRKANVDLDAHATNDSTPA--WSLIGNLIFPILLIAGLAFLFRRSSNL---PGGPG 150
Query: 209 FPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVL 268
+ FG+SKA+FQME TGVTF+DVAGVDEAK++F EVV FLKKPERFTA+GA+IPKGVL
Sbjct: 151 QAMNFGKSKARFQMEAKTGVTFNDVAGVDEAKEEFEEVVSFLKKPERFTAVGAKIPKGVL 210
Query: 269 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 328
LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN+PCIVF
Sbjct: 211 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENSPCIVF 270
Query: 329 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 388
+DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGII+IAATNR D+LD+ALLR
Sbjct: 271 IDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRVDVLDAALLR 330
Query: 389 PGRFDRQV 396
PGRFDRQV
Sbjct: 331 PGRFDRQV 338
>sp|P51327|FTSH_PORPU ATP-dependent zinc metalloprotease FtsH OS=Porphyra purpurea
GN=ftsH PE=3 SV=1
Length = 628
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 232/306 (75%), Positives = 264/306 (86%), Gaps = 5/306 (1%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
++SSRM+Y RFLEYLD VK+VDL+EN AIVEA+ PELGNRVQR+RV+LP + EL+
Sbjct: 38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELI 97
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
K R+ N+D AH + S S ++ L+GNL FPLIL+GGL L RRS+ GGPG
Sbjct: 98 TKLRKANVDLDAHPPK--STSAVWGLLGNLLFPLILVGGLAFLFRRSNNASGGPGQA--- 152
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTA+GA+IPKGVLLV
Sbjct: 153 MSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLV 212
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPCIVF+D
Sbjct: 213 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRGTG+GGGNDEREQTLNQLLTEMDGFEGNTG+IVIAATNRADILDSALLRPG
Sbjct: 273 EIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPG 332
Query: 391 RFDRQV 396
RFDRQV
Sbjct: 333 RFDRQV 338
>sp|Q1PDW5|FTSH6_ARATH ATP-dependent zinc metalloprotease FTSH 6, chloroplastic
OS=Arabidopsis thaliana GN=FTSH6 PE=2 SV=1
Length = 688
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 235/349 (67%), Positives = 276/349 (79%), Gaps = 14/349 (4%)
Query: 73 GVGTALLGSGKAYADEQ-GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPEL 131
+GT L KA + +S+RMSYSRFL++L ++ VKKVDL ENGT+AIVE +P +
Sbjct: 70 ALGTVLAHPAKAEPEAPIEATSNRMSYSRFLQHLKENEVKKVDLIENGTVAIVEISNPVV 129
Query: 132 GNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLF 191
G ++QRVRV LPGL +L+++ +EKN+DFAAH + G+ L N +GNL FPLIL+ L
Sbjct: 130 G-KIQRVRVNLPGLPVDLVREMKEKNVDFAAHPMNVNWGAFLLNFLGNLGFPLILLVSLL 188
Query: 192 LLS--RRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF 249
L S RR+ P GP P G+SKAKFQMEPNTG+TF+DVAGVDEAKQDF E+VEF
Sbjct: 189 LTSSSRRN------PAGPNLPFGLGRSKAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEF 242
Query: 250 LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 309
LK PE+F+A+GA+IPKGVLL GPPGTGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGA
Sbjct: 243 LKTPEKFSALGAKIPKGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGA 302
Query: 310 SRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG 369
SR RDLF KAK N+PCIVF+DEIDAVGR RGTGIGGGNDEREQTLNQ+LTEMDGF GNTG
Sbjct: 303 SRARDLFNKAKANSPCIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTG 362
Query: 370 IIVIAATNRADILDSALLRPGRFDRQVKHVSLSLML---WFLKTHSQYK 415
+IVIAATNR +ILDSALLRPGRFDRQV V L + LK HS+ K
Sbjct: 363 VIVIAATNRPEILDSALLRPGRFDRQVS-VGLPDIRGREEILKVHSRSK 410
>sp|Q1XDF9|FTSH_PORYE ATP-dependent zinc metalloprotease FtsH OS=Porphyra yezoensis
GN=ftsH PE=3 SV=1
Length = 628
Score = 444 bits (1143), Expect = e-124, Method: Compositional matrix adjust.
Identities = 230/306 (75%), Positives = 263/306 (85%), Gaps = 5/306 (1%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
++SSRM+Y RFLEYLD VK+VDL+EN AIVEA+ PELGNRVQR+RV+LP + EL+
Sbjct: 38 IASSRMTYGRFLEYLDMGWVKRVDLYENNHTAIVEAVGPELGNRVQRIRVELPASAPELI 97
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
K R+ N+D AH + S S ++ L+GNL FPL+L+GGL L RRS+ GGPG
Sbjct: 98 TKLRKANVDLDAHPPK--STSAVWGLLGNLLFPLLLVGGLAFLFRRSNNASGGPGQA--- 152
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+SKA FQME TGV F+DVAGV+EAK++F EVV FLK+PE FTA+GA+IPKGVLLV
Sbjct: 153 MSFGKSKALFQMEAKTGVVFNDVAGVEEAKEEFQEVVTFLKQPESFTAVGAKIPKGVLLV 212
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPCIVF+D
Sbjct: 213 GPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCIVFID 272
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRGTG+GGGNDEREQTLNQLLTEMDGFEGNTG+IVIAATNRADILDSALLRPG
Sbjct: 273 EIDAVGRQRGTGVGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRADILDSALLRPG 332
Query: 391 RFDRQV 396
RFDRQV
Sbjct: 333 RFDRQV 338
>sp|Q55700|FTSH2_SYNY3 ATP-dependent zinc metalloprotease FtsH 2 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH2 PE=1 SV=1
Length = 627
Score = 437 bits (1124), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/327 (67%), Positives = 259/327 (79%), Gaps = 14/327 (4%)
Query: 70 GNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISP 129
G+ G A LGS A ++RM+Y RFLEY+D R+ VDL+ENG AIV+ P
Sbjct: 25 GSFGGADANLGSNTA--------NTRMTYGRFLEYVDAGRITSVDLYENGRTAIVQVSDP 76
Query: 130 ELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGG 189
E+ +R R RV LP + EL+ + R+ NI +H + + +++ +GNL FP++LI
Sbjct: 77 EV-DRTLRSRVDLPTNAPELIARLRDSNIRLDSHPVRNNG--MVWGFVGNLIFPVLLIAS 133
Query: 190 LFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEF 249
LF L RRSS PGGPG + FG+SKA+FQM+ TGV FDDVAG+DEAK++ EVV F
Sbjct: 134 LFFLFRRSSNM---PGGPGQAMNFGKSKARFQMDAKTGVMFDDVAGIDEAKEELQEVVTF 190
Query: 250 LKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 309
LK+PERFTA+GA+IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA
Sbjct: 191 LKQPERFTAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGA 250
Query: 310 SRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTG 369
SRVRDLFKKAKENAPC++F+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEMDGFEGNTG
Sbjct: 251 SRVRDLFKKAKENAPCLIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTG 310
Query: 370 IIVIAATNRADILDSALLRPGRFDRQV 396
II+IAATNR D+LDSAL+RPGRFDRQV
Sbjct: 311 IIIIAATNRPDVLDSALMRPGRFDRQV 337
>sp|Q67WJ2|FTSH6_ORYSJ ATP-dependent zinc metalloprotease FTSH 6, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH6 PE=3 SV=1
Length = 686
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 217/316 (68%), Positives = 253/316 (80%), Gaps = 7/316 (2%)
Query: 83 KAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQL 142
+A A E+ V+S+RMSYSRFLEYLD VKKVD FENGT+A+ E +RV RV+VQL
Sbjct: 77 EATAPEE-VTSNRMSYSRFLEYLDAGAVKKVDFFENGTVAVAEVDDAAALSRVHRVKVQL 135
Query: 143 PGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMG 202
PGL EL++K R+K +DFAAH + +G +L +L+ N FPL+ + L S M
Sbjct: 136 PGLPAELVRKLRDKGVDFAAHPVEPSAGVMLLDLLVNFGFPLLFVASLLW----RSPTMN 191
Query: 203 GPGG-PGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGA 261
PGG P P G+SKAKFQMEP TGVTFDDVAGVDEAKQDF E+V+FLK PE+FTA+GA
Sbjct: 192 NPGGGPSLPFGLGKSKAKFQMEPKTGVTFDDVAGVDEAKQDFQEIVQFLKFPEKFTAVGA 251
Query: 262 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 321
R PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFS+SGSEF+EMFVGVGASRVRDLF +AK
Sbjct: 252 RTPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRVRDLFDRAKA 311
Query: 322 NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEM-DGFEGNTGIIVIAATNRAD 380
+APC+VF+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEM G+ G++VIAATNR +
Sbjct: 312 SAPCLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFGGGDGGVVVIAATNRPE 371
Query: 381 ILDSALLRPGRFDRQV 396
ILD+ALLRPGRFDR+V
Sbjct: 372 ILDAALLRPGRFDRRV 387
>sp|P49825|FTSH_ODOSI ATP-dependent zinc metalloprotease FtsH OS=Odontella sinensis
GN=ftsH PE=3 SV=1
Length = 644
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/331 (61%), Positives = 260/331 (78%), Gaps = 9/331 (2%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
V SS+M+Y RFLEYL+ V +VDL++N AIV+A SPELGNR Q +RV++P + +L+
Sbjct: 50 VISSKMTYGRFLEYLEMGWVNQVDLYDNSRNAIVQASSPELGNRPQTIRVEIPVGASQLI 109
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
QK +E NIDF AH A++ + + N++ N+ P+I I GL L + S GG G P
Sbjct: 110 QKLKEYNIDFDAHPAEQKN--IFVNILSNILLPIIFITGLVYLFQNSENFGGGSGQS--P 165
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++ G+S A+F+ P+TGV+F D+AG+DEAK +F E+V FLK+P+++T +GA+IPKG+LLV
Sbjct: 166 MSLGKSTARFERRPDTGVSFKDIAGIDEAKTEFEEIVSFLKEPDKYTIVGAKIPKGILLV 225
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIA EA VPFFS++GSEFVEMF+G+GA+RVRDLFKKA ENAPCIVF+D
Sbjct: 226 GPPGTGKTLLAKAIANEADVPFFSVAGSEFVEMFIGIGAARVRDLFKKASENAPCIVFID 285
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGR+RG G+GGGNDEREQTLNQLLTEMDGF+ N G+IV+ ATNRADILD+ALLRPG
Sbjct: 286 EIDAVGRERGAGVGGGNDEREQTLNQLLTEMDGFKENKGVIVVGATNRADILDAALLRPG 345
Query: 391 RFDRQVKHVSLSLML---WFLKTHSQYKDPL 418
RFDRQV V+L L LK H++ K PL
Sbjct: 346 RFDRQVT-VNLPDRLGRVGILKVHARNK-PL 374
>sp|O19922|FTSH_CYACA ATP-dependent zinc metalloprotease FtsH OS=Cyanidium caldarium
GN=ftsH PE=3 SV=1
Length = 614
Score = 395 bits (1016), Expect = e-109, Method: Compositional matrix adjust.
Identities = 213/327 (65%), Positives = 249/327 (76%), Gaps = 9/327 (2%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
SSSRM+Y RFLEY+D + VKKVDL++N AIV+ I+P++ Q VRV+LP S EL+
Sbjct: 37 SSSRMTYGRFLEYIDMNWVKKVDLYDNARTAIVDIINPDIKGEEQLVRVELPTFSSELVS 96
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
K + K IDF AH + + L + + NL PLILI LF RR G GPG
Sbjct: 97 KLKNKLIDFDAHPSSSNVN--LVSWLSNLLLPLILIITLFFFFRR---GNKSSSGPGQAF 151
Query: 212 AFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVG 271
FG++KA+F ME TG+ F+DVAG++EAK++ E+V FLK +FT +GA IPKGVLLVG
Sbjct: 152 NFGKAKARFHMEAKTGIVFEDVAGIEEAKEELQEIVAFLKDSRKFTNVGATIPKGVLLVG 211
Query: 272 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 331
PPGTGKTLLAKAIAGEA PFFSISGSEFVEMFVGVGASRVRDLFKKAKE APCIVF+DE
Sbjct: 212 PPGTGKTLLAKAIAGEASAPFFSISGSEFVEMFVGVGASRVRDLFKKAKEKAPCIVFIDE 271
Query: 332 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGR 391
IDAVGRQRG GIGGGNDEREQTLNQLLTEMDGF G+TG+IV+AATNR D+LDSALLRPGR
Sbjct: 272 IDAVGRQRGVGIGGGNDEREQTLNQLLTEMDGFSGDTGVIVVAATNRIDVLDSALLRPGR 331
Query: 392 FDRQVKHVSLSLM---LWFLKTHSQYK 415
FDRQ+ VSL + L LK HS+ K
Sbjct: 332 FDRQI-MVSLPNINGRLAILKVHSKKK 357
>sp|Q9TJ83|FTSH_CYAME ATP-dependent zinc metalloprotease FtsH OS=Cyanidioschyzon merolae
GN=ftsH PE=3 SV=1
Length = 603
Score = 394 bits (1013), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/333 (61%), Positives = 247/333 (74%), Gaps = 18/333 (5%)
Query: 86 ADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGL 145
A++ V++SRM+Y R LEY+ VK++D+++ A++EA SPE G Q +RV LP
Sbjct: 23 ANQMPVATSRMTYGRLLEYMQMGWVKRIDVYDR--TALIEASSPETG--WQWIRVDLPAN 78
Query: 146 SQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGG-LFLLSRRSSGGMGGP 204
S + L++ + +ID H + S N+ N PLI+IG ++LLSR +S G
Sbjct: 79 SSDWLEQAKTLHIDVDVH-----AVSNWINVASNWIIPLIIIGVVIWLLSRSASSNTTGA 133
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
L FG+SKA+FQM TG+ FDDVAG++EAK++ EVV FLK P +F A+GA IP
Sbjct: 134 ------LNFGKSKARFQMVAKTGIMFDDVAGIEEAKEELAEVVAFLKNPSKFLAVGASIP 187
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KGVLLVGPPGTGKTLLAKAIAGEA VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAP
Sbjct: 188 KGVLLVGPPGTGKTLLAKAIAGEASVPFFSISGSEFVEMFVGVGASRVRDLFKKAKQNAP 247
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
C+VF+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEMDGFEGNTG+IVIAATNR D+LD+
Sbjct: 248 CLVFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVIAATNRVDVLDA 307
Query: 385 ALLRPGRFDRQ--VKHVSLSLMLWFLKTHSQYK 415
ALLRPGRFDRQ V + + LK H+ K
Sbjct: 308 ALLRPGRFDRQIMVSMPDVKSRIAILKVHANQK 340
>sp|B7T1V0|FTSH_VAULI ATP-dependent zinc metalloprotease FtsH OS=Vaucheria litorea
GN=ftsH PE=3 SV=1
Length = 644
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 210/333 (63%), Positives = 259/333 (77%), Gaps = 13/333 (3%)
Query: 88 EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQ 147
+Q ++ +M+Y RFLEYLD +KKVD ++NG IAI+EA SPELG+R+Q++RV++P
Sbjct: 37 KQNSNNIKMTYGRFLEYLDMGWIKKVDFYDNGRIAIIEASSPELGDRLQKIRVEIPVGDS 96
Query: 148 ELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGP 207
L+ K R +DF AH+ G +F + N+ PLI+I GL L RRS+ M GPG
Sbjct: 97 PLIVKLRTAKVDFTAHSTINSKG--IFTQLSNIFIPLIIIIGLIFLFRRSTNFMSGPGQL 154
Query: 208 GFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGV 267
++F +++AK Q E NT V FDDVAG+DE K++F EVV FL+KP+RF ++GA+IPKGV
Sbjct: 155 ---MSFRKARAKVQTEINTDVVFDDVAGIDEVKEEFEEVVTFLRKPQRFLSVGAKIPKGV 211
Query: 268 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 327
+L+GPPGTGKTLLAKAIAGEAGVPF SISGSEFVEMFVG+GASRVRDLFK A++NAPCIV
Sbjct: 212 ILIGPPGTGKTLLAKAIAGEAGVPFISISGSEFVEMFVGIGASRVRDLFKTAQQNAPCIV 271
Query: 328 FVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALL 387
F+DEIDAVGRQRG GIGGGNDEREQTLNQ+LTEMDGF+ NTGIIVIAATNR D+LD ALL
Sbjct: 272 FIDEIDAVGRQRGAGIGGGNDEREQTLNQILTEMDGFKENTGIIVIAATNRVDVLDGALL 331
Query: 388 RPGRFDRQVKHVSLSL-----MLWFLKTHSQYK 415
RPGRFDRQ VS++L L LK H++ K
Sbjct: 332 RPGRFDRQ---VSINLPDIKGRLEILKVHAKNK 361
>sp|Q8YMZ8|FTSH_NOSS1 ATP-dependent zinc metalloprotease FtsH OS=Nostoc sp. (strain PCC
7120 / UTEX 2576) GN=ftsH PE=3 SV=1
Length = 656
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 206/374 (55%), Positives = 261/374 (69%), Gaps = 20/374 (5%)
Query: 50 KASLSQKQHEGRRGFLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDR 109
K +L ++Q R + L ++ + + G A Q +SY ++ +++++
Sbjct: 30 KKALIKQQSPKRVAWTGALAASLIMLPTMFGGNPVLA--QKAERESLSYGELIQKVNQEQ 87
Query: 110 VKKVDLFENGTIAIV--EAISPELGNRVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQE 167
VK+V+L E IA V + P+ ++V+L + EL+ + +EKN+DF ++
Sbjct: 88 VKRVELDETEQIAKVYLKGQKPD----APPIQVRLLEQNNELINRLKEKNVDFGEISSAN 143
Query: 168 DSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTG 227
++ L+ NL + L L+ + L RRS+ + FG+S+A+FQME TG
Sbjct: 144 SRAAV--GLLINLMWILPLVALMLLFLRRSTNASSQA------MNFGKSRARFQMEAKTG 195
Query: 228 VTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGE 287
V FDDVAG++EAK++ EVV FLK+PERFTA+GARIPKGVLLVGPPGTGKTLLAKAIAGE
Sbjct: 196 VKFDDVAGIEEAKEELQEVVTFLKQPERFTAVGARIPKGVLLVGPPGTGKTLLAKAIAGE 255
Query: 288 AGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGN 347
A VPFFSISGSEFVEMFVGVGASRVRDLFKKAK+NAPC++F+DEIDAVGRQRGTGIGGGN
Sbjct: 256 AAVPFFSISGSEFVEMFVGVGASRVRDLFKKAKDNAPCLIFIDEIDAVGRQRGTGIGGGN 315
Query: 348 DEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQ--VKHVSLSLML 405
DEREQTLNQLLTEMDGFEGNTGII+IAATNR D+LDSALLRPGRFDRQ V L L
Sbjct: 316 DEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALLRPGRFDRQVIVDAPDLKGRL 375
Query: 406 WFLKTHSQYK--DP 417
L+ HS+ K DP
Sbjct: 376 EILQVHSRNKKVDP 389
>sp|P73179|FTSH1_SYNY3 ATP-dependent zinc metalloprotease FtsH 1 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH1 PE=2 SV=1
Length = 665
Score = 367 bits (941), Expect = e-100, Method: Compositional matrix adjust.
Identities = 197/328 (60%), Positives = 241/328 (73%), Gaps = 14/328 (4%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
+ +M+Y + ++ + ++V KV++ N AIV G++ Q V QL + ELL
Sbjct: 80 AEPKMNYGQLIDAIKANQVAKVEVDTNRRQAIVTLKDAPPGSKPQTV--QLLDNNPELLN 137
Query: 152 --KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGF 209
+ R + ID + ++S L+ L+ NL ILIG + ++ RRS+ G
Sbjct: 138 LLRSRSETIDLDINRTPDNSA--LYGLLTNLLVVAILIGLVVMVVRRSANASGQA----- 190
Query: 210 PLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLL 269
++FG+SKA+FQME TGV FDDVAG+DEAK++ EVV FLK+PE+FTAIGA+IP+GVLL
Sbjct: 191 -MSFGKSKARFQMEAKTGVGFDDVAGIDEAKEELQEVVTFLKQPEKFTAIGAKIPRGVLL 249
Query: 270 VGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFV 329
+GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPC+VF+
Sbjct: 250 IGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLVFI 309
Query: 330 DEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRP 389
DEIDAVGRQRG G GGGNDEREQTLNQLLTEMDGFEGN+GIIVIAATNR D+LD ALLRP
Sbjct: 310 DEIDAVGRQRGVGYGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDLALLRP 369
Query: 390 GRFDRQ--VKHVSLSLMLWFLKTHSQYK 415
GRFDRQ V + + L H+Q K
Sbjct: 370 GRFDRQVTVDYPDVQGRELILAIHAQNK 397
>sp|B2XTF7|FTSH_HETA2 ATP-dependent zinc metalloprotease FtsH OS=Heterosigma akashiwo
(strain NIES-293) GN=ftsH PE=3 SV=1
Length = 663
Score = 360 bits (925), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 186/315 (59%), Positives = 235/315 (74%), Gaps = 10/315 (3%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
+SS+M+Y+R L Y++K +K +D +ENG IAIVEA S EL +R QR+RV++P S L+
Sbjct: 55 ASSKMAYARLLNYIEKGWIKTIDFYENGQIAIVEASSSELSDRPQRLRVEIPAGSTSLIG 114
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
K +E N+D AH + D + + +G+L P +++ +L R++
Sbjct: 115 KLKEANVDINAHPPKLDIFKTISDTLGSLIVPGLVVAVFYLFLERANNNNNNNSNGSPFG 174
Query: 212 A----------FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGA 261
G+ K + Q EP+TG+TF D+AG++E K++F E+V FLK P RFTA+GA
Sbjct: 175 PGGGPNQNMRGLGEIKKEIQKEPDTGITFKDIAGIEEVKEEFEEIVTFLKDPSRFTAVGA 234
Query: 262 RIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKE 321
IPKGVLLVGPPGTGKTLLAKAIAGEA VPF +ISGSEFVEMFVGVGA+RVR+LF+KAK+
Sbjct: 235 TIPKGVLLVGPPGTGKTLLAKAIAGEAKVPFINISGSEFVEMFVGVGAARVRNLFEKAKQ 294
Query: 322 NAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADI 381
+ PCI+F+DEIDAVGRQRG G+GGGNDEREQTLNQLLTEMDGFE N GI+VIAATNRADI
Sbjct: 295 DTPCIIFIDEIDAVGRQRGAGVGGGNDEREQTLNQLLTEMDGFEKNKGIVVIAATNRADI 354
Query: 382 LDSALLRPGRFDRQV 396
LD+ALLRPGRFDRQV
Sbjct: 355 LDNALLRPGRFDRQV 369
>sp|Q10ZF7|FTSH_TRIEI ATP-dependent zinc metalloprotease FtsH OS=Trichodesmium erythraeum
(strain IMS101) GN=ftsH PE=3 SV=1
Length = 667
Score = 355 bits (911), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 196/328 (59%), Positives = 238/328 (72%), Gaps = 23/328 (7%)
Query: 74 VGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGN 133
+ A+L A+A+ + +SYS+ L+ + V ++D + + IA V
Sbjct: 59 IAQAVLLVSPAFANS---TQKNLSYSQLLDKIQAGEVTEIDYYPSRGIAKVSL------- 108
Query: 134 RVQRVR-----VQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIG 188
+ QR R VQ+ ELL + R + IDF + ++S ++ +I N+ ++I
Sbjct: 109 KGQRSREGMYIVQMFEHVPELLDQVRAQKIDFELKRSPDNSVAM--GIIFNILIVFVVIV 166
Query: 189 GLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVE 248
L + RRSS G L FG+S+A+FQME TGV F+DVAG++EAK++ EVV
Sbjct: 167 VLLAILRRSSQSQGNA------LNFGKSRARFQMEAKTGVLFEDVAGIEEAKEELQEVVS 220
Query: 249 FLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 308
FLKKPE+FTAIGA+IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG
Sbjct: 221 FLKKPEKFTAIGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVG 280
Query: 309 ASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNT 368
ASRVRDLFKKAKENAPCI+F+DEIDAVGRQRG GIGGGNDEREQTLNQLLTEMDGFEGN+
Sbjct: 281 ASRVRDLFKKAKENAPCIIFIDEIDAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNS 340
Query: 369 GIIVIAATNRADILDSALLRPGRFDRQV 396
GII+IAATNR D+LD ALLRPGRFDRQV
Sbjct: 341 GIIIIAATNRPDVLDVALLRPGRFDRQV 368
>sp|P72991|FTSH3_SYNY3 ATP-dependent zinc metalloprotease FtsH 3 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=ftsH3 PE=1 SV=1
Length = 616
Score = 354 bits (908), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 187/316 (59%), Positives = 230/316 (72%), Gaps = 19/316 (6%)
Query: 84 AYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAIS---PELGNRVQRVRV 140
A+ D + +SYS F+ ++ +++++V+L + T A V S P L V
Sbjct: 27 AFFDRPTQTRETLSYSDFVNRVEANQIERVNLSADRTQAQVPNPSGGPPYL--------V 78
Query: 141 QLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGG 200
LP +L+ + N+D A Q D G F + L P++L+ G+F L RR+ G
Sbjct: 79 NLPN-DPDLINILTQHNVDIAVQ-PQSDEG-FWFRIASTLFLPILLLVGIFFLFRRAQSG 135
Query: 201 MGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIG 260
G + FG+SKA+ QMEP T VTF DVAG+++AK + EVV+FLK +RFT +G
Sbjct: 136 PGSQA-----MNFGKSKARVQMEPQTQVTFGDVAGIEQAKLELTEVVDFLKNADRFTELG 190
Query: 261 ARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK 320
A+IPKGVLLVGPPGTGKTLLAKA+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK
Sbjct: 191 AKIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAK 250
Query: 321 ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRAD 380
NAPCIVF+DEIDAVGRQRG G+GGGNDEREQTLNQLLTEMDGFEGNTGII++AATNR D
Sbjct: 251 ANAPCIVFIDEIDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNTGIIIVAATNRPD 310
Query: 381 ILDSALLRPGRFDRQV 396
+LDSAL+RPGRFDRQV
Sbjct: 311 VLDSALMRPGRFDRQV 326
>sp|Q9FH02|FTSH5_ARATH ATP-dependent zinc metalloprotease FTSH 5, chloroplastic
OS=Arabidopsis thaliana GN=FTSH5 PE=1 SV=1
Length = 704
Score = 351 bits (900), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 239/324 (73%), Gaps = 11/324 (3%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL + K +V++V ++G++ + A+ NR R V +P +L+
Sbjct: 122 TQWRYSEFLNAVKKGKVERVKFSKDGSVLQLTAVD----NR--RATVIVPN-DPDLIDIL 174
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+D + + +G LF+ IGNL FPL+ GGLF L R GG GGPGG G P+ F
Sbjct: 175 AMNGVDISVSEGEGGNG--LFDFIGNLLFPLLAFGGLFYLFRGGQGGAGGPGGLGGPMDF 232
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 233 GRSKSKFQEVPETGVTFGDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 292
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 293 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 352
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFD
Sbjct: 353 AVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 412
Query: 394 RQVK--HVSLSLMLWFLKTHSQYK 415
RQV ++ + LK HS+ K
Sbjct: 413 RQVTVDRPDVAGRVQILKVHSRGK 436
>sp|Q2JNP0|FTSH_SYNJB ATP-dependent zinc metalloprotease FtsH OS=Synechococcus sp.
(strain JA-2-3B'a(2-13)) GN=ftsH PE=3 SV=1
Length = 638
Score = 350 bits (897), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 237/326 (72%), Gaps = 17/326 (5%)
Query: 96 MSYSRFLEYLDKDRVKKVDLFENG----TIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
+SYS + +++ V KV L E +AI EA E+ NR +V+V LP L+ E
Sbjct: 41 ISYSDLISRVERGEVSKV-LVETAPDGRQVAIAEA---EINNRATQVQVNLPPLTPEFEN 96
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
++ A QE+ LL ++ P++L+ GLF L RR+ G G L
Sbjct: 97 TLVANGVELAVRPVQEEG--LLGRILSTFFLPVLLLLGLFFLLRRAQNGPGSQA-----L 149
Query: 212 AFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVG 271
FG+S+A+ QMEP T +TF+DVAG+D+AK + EVV+FLK ERFTA+GA+IP+GVLLVG
Sbjct: 150 NFGKSRARVQMEPKTQITFNDVAGIDQAKLELAEVVDFLKNSERFTALGAKIPRGVLLVG 209
Query: 272 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 331
PPGTGKTLLA+A+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF++AK+NAPCIVF+DE
Sbjct: 210 PPGTGKTLLARAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQAKQNAPCIVFIDE 269
Query: 332 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGR 391
IDAVGRQRG G+GGGNDEREQTLNQLLTEMDGFEGN+GIIVIAATNR D+LD+ALLRPGR
Sbjct: 270 IDAVGRQRGAGLGGGNDEREQTLNQLLTEMDGFEGNSGIIVIAATNRPDVLDAALLRPGR 329
Query: 392 FDRQ--VKHVSLSLMLWFLKTHSQYK 415
FDRQ V L LK H++ K
Sbjct: 330 FDRQVTVDRPDFQGRLEILKVHARGK 355
>sp|O82150|FTSH_TOBAC ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Nicotiana
tabacum GN=FTSH PE=2 SV=2
Length = 714
Score = 345 bits (885), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 191/324 (58%), Positives = 239/324 (73%), Gaps = 11/324 (3%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
S+ YS FL + K +V++V ++G+ + A+ +R V +P +L+
Sbjct: 125 SQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDG------RRATVTVPN-DPDLIDIL 177
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+D + + +G+ LFNLIGNL FP I GLF L +RS GG GGPGG G P+ F
Sbjct: 178 AMNGVDISVSEG-DSAGNGLFNLIGNL-FPFIAFAGLFYLFQRSQGGPGGPGGLGGPMDF 235
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 236 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 295
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 296 GTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 355
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFD
Sbjct: 356 AVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 415
Query: 394 RQ--VKHVSLSLMLWFLKTHSQYK 415
RQ V ++ + L+ HS+ K
Sbjct: 416 RQVTVDRPDVAGRIKILQVHSRGK 439
>sp|Q39444|FTSH_CAPAN ATP-dependent zinc metalloprotease FTSH, chloroplastic (Fragment)
OS=Capsicum annuum GN=FTSH PE=2 SV=1
Length = 662
Score = 340 bits (872), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 187/325 (57%), Positives = 239/325 (73%), Gaps = 11/325 (3%)
Query: 93 SSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQK 152
S++ YS FL + K +V++V ++G+ + A+ +R V +P +L+
Sbjct: 101 STQWRYSEFLNAVKKGKVERVRFSKDGSALQLTAVDG------RRANVIVPN-DPDLIDI 153
Query: 153 FREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLA 212
+D + ++ + G+ LF++IGNL FP I GLF L RRS GG GGPGG G P+
Sbjct: 154 LAMNGVDISV--SEGEGGNGLFSVIGNLLFPFIAFAGLFFLFRRSQGGPGGPGGLGGPMD 211
Query: 213 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGP 272
FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGP
Sbjct: 212 FGRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 271
Query: 273 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 332
PGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVR LF+ AK APCIVF+DEI
Sbjct: 272 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRHLFENAKSKAPCIVFIDEI 331
Query: 333 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRF 392
DAVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPG+F
Sbjct: 332 DAVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGKF 391
Query: 393 DRQ--VKHVSLSLMLWFLKTHSQYK 415
DRQ V ++ + L+ HS+ K
Sbjct: 392 DRQVTVDRPDVAGRVRILQVHSRGK 416
>sp|Q9BAE0|FTSH_MEDSA ATP-dependent zinc metalloprotease FTSH, chloroplastic OS=Medicago
sativa GN=FTSH PE=2 SV=1
Length = 706
Score = 339 bits (870), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 184/324 (56%), Positives = 237/324 (73%), Gaps = 11/324 (3%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
S+ YS FL + K +V++V ++G++ + A+ +R V +P +L+
Sbjct: 125 SQWRYSEFLNAVKKGKVERVRFSKDGSVLQLTAVDG------RRANVIVPN-DPDLIDIL 177
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
+D + ++ +G LF+ +G+L P + GLFL+ RR GG GGPGG G P+ F
Sbjct: 178 AMNGVDISVSEGEQGNG--LFSFVGSLLLPFLAFAGLFLIFRRGQGGPGGPGGLGGPMDF 235
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGPP
Sbjct: 236 GRSKSKFQEVPETGVTFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPP 295
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLA+A+AGEAG PFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEID
Sbjct: 296 GTGKTLLARAVAGEAGTPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEID 355
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRFD
Sbjct: 356 AVGRQRGAGLGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFD 415
Query: 394 RQ--VKHVSLSLMLWFLKTHSQYK 415
RQ V ++ + L+ HS+ K
Sbjct: 416 RQVTVDRPDVAGRVKILQVHSRGK 439
>sp|Q39102|FTSH1_ARATH ATP-dependent zinc metalloprotease FTSH 1, chloroplastic
OS=Arabidopsis thaliana GN=FTSH1 PE=1 SV=2
Length = 716
Score = 332 bits (851), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 190/325 (58%), Positives = 239/325 (73%), Gaps = 11/325 (3%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
S+ YS FL + K +V++V ++G++ + A+ NR R V +P +L+
Sbjct: 132 SQWRYSEFLNAVKKGKVERVRFSKDGSVVQLTAVD----NR--RASVIVPN-DPDLIDIL 184
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP-LA 212
+D + E SG+ LF +IGNL FPL+ GGLFLL RR+ GG GG G +
Sbjct: 185 AMNGVDISVSEG-ESSGNDLFTVIGNLIFPLLAFGGLFLLFRRAQGGPGGGPGGLGGPMD 243
Query: 213 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGP 272
FG+SK+KFQ P TGV+F DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGP
Sbjct: 244 FGRSKSKFQEVPETGVSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 303
Query: 273 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 332
PGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEI
Sbjct: 304 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEI 363
Query: 333 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRF 392
DAVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LDSALLRPGRF
Sbjct: 364 DAVGRQRGAGMGGGNDEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRF 423
Query: 393 DRQ--VKHVSLSLMLWFLKTHSQYK 415
DRQ V ++ + L+ HS+ K
Sbjct: 424 DRQVTVDRPDVAGRVKILQVHSRGK 448
>sp|Q5Z974|FTSH1_ORYSJ ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza
sativa subsp. japonica GN=FTSH1 PE=2 SV=1
Length = 686
Score = 329 bits (843), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 185/325 (56%), Positives = 229/325 (70%), Gaps = 10/325 (3%)
Query: 94 SRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL + K +V++V ++G + + AI G R V P L L
Sbjct: 101 AQWRYSEFLSAVKKGKVERVRFSKDGGLLQLTAID---GRRATVVVPNDPDLIDILATN- 156
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP-LA 212
+I A +A G L F +GNL FP + GLF L RR+ GG G G +
Sbjct: 157 -GVDISVAEGDAAGPGGFLAF--VGNLLFPFLAFAGLFFLFRRAQGGPGAGPGGLGGPMD 213
Query: 213 FGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGP 272
FG+SK+KFQ P TGVTF DVAG D+AK + EVV+FLK P+++TA+GA+IPKG LLVGP
Sbjct: 214 FGRSKSKFQEVPETGVTFVDVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGP 273
Query: 273 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 332
PGTGKTLLA+A+AGEAGVPFFS + SEFVE+FVGVGASRVRDLF+KAK APCIVF+DEI
Sbjct: 274 PGTGKTLLARAVAGEAGVPFFSCAASEFVELFVGVGASRVRDLFEKAKAKAPCIVFIDEI 333
Query: 333 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRF 392
DAVGRQRG G+GGGNDEREQT+NQLLTEMDGF GN+G+IV+AATNR D+LD+ALLRPGRF
Sbjct: 334 DAVGRQRGAGLGGGNDEREQTINQLLTEMDGFAGNSGVIVLAATNRPDVLDAALLRPGRF 393
Query: 393 DRQ--VKHVSLSLMLWFLKTHSQYK 415
DRQ V ++ + L+ HS+ K
Sbjct: 394 DRQVTVDRPDVAGRVKILEVHSRGK 418
>sp|D1J722|FTSH_ECTSI ATP-dependent zinc metalloprotease FtsH OS=Ectocarpus siliculosus
GN=ftsH PE=3 SV=1
Length = 661
Score = 328 bits (840), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 183/366 (50%), Positives = 239/366 (65%), Gaps = 39/366 (10%)
Query: 74 VGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAIS----- 128
VGT L+ ++ + +SY FL YL+ +KKVDL+EN +A+ +A
Sbjct: 33 VGTNLINLKNSHPTQM------VSYDTFLHYLENGAIKKVDLYENAELAVFDAFESLDQN 86
Query: 129 -----PELG----------NRVQRVRVQLPGLSQELLQKFREKNIDFAAHN-AQEDSGSL 172
P L + + + V++P + L+ R+ IDF A+ DS
Sbjct: 87 LLKPVPLLSSDTLFGILNSDEFRPIGVKIPVRNSSLILTLRDYKIDFTAYPIVNFDS--- 143
Query: 173 LFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDD 232
++ ++ L P++LI L S F +++AK Q++ +TGV F D
Sbjct: 144 IWPILSVLLIPVLLIVVYRLFFSEGSNY-------DFFGNLRKARAKIQLDADTGVLFSD 196
Query: 233 VAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPF 292
VAG+DEAKQ+F E V FLK P+ FTA+GA PKGV++VGPPGTGKTLLAKAIAGEAGVPF
Sbjct: 197 VAGIDEAKQEFEEFVSFLKMPQLFTAVGANPPKGVIIVGPPGTGKTLLAKAIAGEAGVPF 256
Query: 293 FSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQ 352
SISGSEFVEMFVG+GASRVRDLF+ A+ N+PCI+F+DEIDA+GRQRGTG+GG NDEREQ
Sbjct: 257 ISISGSEFVEMFVGIGASRVRDLFETAERNSPCILFIDEIDAIGRQRGTGVGGTNDEREQ 316
Query: 353 TLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQVKHVSLSLM--LWFLKT 410
TLNQ+LTEMDGF+ +GIIVIAATNRAD+LDSALLRPGRFDRQ+ ++ + LK
Sbjct: 317 TLNQILTEMDGFKPTSGIIVIAATNRADVLDSALLRPGRFDRQITVYLPNIYGRIEILKV 376
Query: 411 HSQYKD 416
HS+ K+
Sbjct: 377 HSRNKN 382
>sp|B8H444|FTSH_CAUCN ATP-dependent zinc metalloprotease FtsH OS=Caulobacter crescentus
(strain NA1000 / CB15N) GN=ftsH PE=2 SV=1
Length = 626
Score = 326 bits (836), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/306 (56%), Positives = 219/306 (71%), Gaps = 20/306 (6%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
SSS +SYS+ L+ +D ++K + IA ++ N+ + V P S+EL+
Sbjct: 30 SSSEISYSQLLKDVDAGKIKSAE------IAGQTVLAKTADNKT--LTVNAPMNSEELVN 81
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFL-LSRRSSGGMGGPGGPGFP 210
+ KN D + SGS+ F I P++L+ G++L L R+ GG G G
Sbjct: 82 RMVAKNADV-----KFKSGSISFLAILVQLLPILLVVGVWLFLMRQMQGGAKGAMG---- 132
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
FG+SKA+ E +TF+DVAGVDEAK++ EVV+FLK P +F +G +IPKG LLV
Sbjct: 133 --FGKSKARLLTENKNRITFEDVAGVDEAKEELQEVVDFLKDPAKFQRLGGKIPKGALLV 190
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTL+A+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NAPCI+F+D
Sbjct: 191 GPPGTGKTLIARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNAPCIIFID 250
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGR RG G+GGGNDEREQTLNQLL EMDGFE N GII+IAATNR D+LD ALLRPG
Sbjct: 251 EIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEANEGIILIAATNRPDVLDPALLRPG 310
Query: 391 RFDRQV 396
RFDRQV
Sbjct: 311 RFDRQV 316
>sp|A1URA3|FTSH_BARBK ATP-dependent zinc metalloprotease FtsH OS=Bartonella bacilliformis
(strain ATCC 35685 / KC583) GN=ftsH PE=3 SV=1
Length = 764
Score = 322 bits (825), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 171/313 (54%), Positives = 219/313 (69%), Gaps = 22/313 (7%)
Query: 87 DEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNR--VQRVRVQLPG 144
+ Q S+ +SYS FL+ +D + +K V + G + ++ + +R + + PG
Sbjct: 28 NRQRASNGEVSYSEFLQKIDNNELKTVTI--QG-----QKLTGQTADRRMISTYAPRDPG 80
Query: 145 LSQELLQKFREKNIDFAAHNAQEDSG-SLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGG 203
L +Q+ ++ A E SG S+ NL+ +L LI++G R+ GG G
Sbjct: 81 L----VQRLNTNKVNIRA--VPESSGNSIFLNLLFSLLPVLIIVGAWIFFMRQMQGGSRG 134
Query: 204 PGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARI 263
L FG+SKAK E VTF DVAGV+EAKQD E+V+FL++P++F +G RI
Sbjct: 135 A------LGFGKSKAKLLTEAQGRVTFKDVAGVEEAKQDLQEIVDFLREPQKFQRLGGRI 188
Query: 264 PKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENA 323
P+GVLLVGPPGTGKTLLA++IAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+NA
Sbjct: 189 PRGVLLVGPPGTGKTLLARSIAGEANVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKNA 248
Query: 324 PCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILD 383
PCI+F+DEIDAVGR RG G+GGGNDEREQTLNQLL EMDGFE N II+IAATNR D+LD
Sbjct: 249 PCIIFIDEIDAVGRHRGAGLGGGNDEREQTLNQLLVEMDGFEPNESIILIAATNRPDVLD 308
Query: 384 SALLRPGRFDRQV 396
ALLRPGRFDRQV
Sbjct: 309 PALLRPGRFDRQV 321
>sp|P63343|FTSH_SALTY ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ftsH PE=3 SV=1
Length = 644
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 214/303 (70%), Gaps = 17/303 (5%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ +++D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNQDQVREARI--NGREINVTKKDS-------NRYTTYIPINDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQV 396
RQV
Sbjct: 315 RQV 317
>sp|P63344|FTSH_SALTI ATP-dependent zinc metalloprotease FtsH OS=Salmonella typhi GN=ftsH
PE=3 SV=1
Length = 644
Score = 316 bits (810), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 214/303 (70%), Gaps = 17/303 (5%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ +++D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNQDQVREARI--NGREINVTKKDS-------NRYTTYIPINDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQV 396
RQV
Sbjct: 315 RQV 317
>sp|Q8X9L0|FTSH_ECO57 ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli O157:H7
GN=ftsH PE=3 SV=1
Length = 644
Score = 316 bits (809), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 213/303 (70%), Gaps = 17/303 (5%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ ++ D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNNDQVREARI--NGREINVTKKDS-------NRYTTYIPVQDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQV 396
RQV
Sbjct: 315 RQV 317
>sp|D1BLD0|FTSH_VEIPT ATP-dependent zinc metalloprotease FtsH OS=Veillonella parvula
(strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) GN=ftsH
PE=3 SV=1
Length = 642
Score = 316 bits (809), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 171/308 (55%), Positives = 216/308 (70%), Gaps = 16/308 (5%)
Query: 89 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQE 148
Q + S +SY+ F++ + + +V+ V TI I +L N + P +
Sbjct: 28 QSANKSELSYTGFIQQVQQKKVESV------TITNDHGIKGKLKNGTE-FNSYAP-TDET 79
Query: 149 LLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPG 208
L++ ++ ++ A A + + +L+G+ A P+I++ LF + + GG G
Sbjct: 80 LIKTLQDNGVEITA--APPEQPAWWMSLLGS-AIPIIILVVLFFFIMQQT-----QGGGG 131
Query: 209 FPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVL 268
+ FG+S+AK E N V+F DVAG +EAKQ+ EVVEFLK P +FT IGA+IPKGVL
Sbjct: 132 RVMNFGKSRAKLMGEGNVKVSFKDVAGAEEAKQELEEVVEFLKDPGKFTTIGAKIPKGVL 191
Query: 269 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 328
L GPPGTGKTLLAKA+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF +AK+NAPCI+F
Sbjct: 192 LAGPPGTGKTLLAKAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFTQAKKNAPCIIF 251
Query: 329 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 388
+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII IAATNR DILD ALLR
Sbjct: 252 IDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGANEGIITIAATNRPDILDPALLR 311
Query: 389 PGRFDRQV 396
PGRFDRQV
Sbjct: 312 PGRFDRQV 319
>sp|P0AAI4|FTSH_SHIFL ATP-dependent zinc metalloprotease FtsH OS=Shigella flexneri
GN=ftsH PE=3 SV=1
Length = 644
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 213/303 (70%), Gaps = 17/303 (5%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ ++ D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNNDQVREARI--NGREINVTKKDS-------NRYTTYIPVQDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQV 396
RQV
Sbjct: 315 RQV 317
>sp|C6V4R9|FTSH_NEORI ATP-dependent zinc metalloprotease FtsH OS=Neorickettsia risticii
(strain Illinois) GN=ftsH PE=3 SV=1
Length = 636
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/309 (52%), Positives = 219/309 (70%), Gaps = 20/309 (6%)
Query: 90 GVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQEL 149
G+ + ++ +S FL+ ++K V+K+ + ++++ G R Q EL
Sbjct: 32 GIRNEKIQFSEFLDLVEKGEVQKIVIEGYDISGVLKS-----GTRFYTKATQY----TEL 82
Query: 150 LQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGG--LFLLSRRSSGGMGGPGGP 207
+ R+ N+DF + G LLFN++ + FP++L+ G +F + + +GG
Sbjct: 83 IPLLRKNNVDFQVASGDSFLG-LLFNILISW-FPMLLLIGVWIFFMKQMQAGG------- 133
Query: 208 GFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGV 267
+ FG+SKA+ + + VTF DVAG+DEAK++ E+VEFL++P++F +G +IPKG
Sbjct: 134 NKTMTFGKSKARLLSDRSNKVTFHDVAGIDEAKEELAEIVEFLREPKKFQKLGGKIPKGC 193
Query: 268 LLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIV 327
LL+GPPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K+NAPC++
Sbjct: 194 LLIGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQGKKNAPCLI 253
Query: 328 FVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALL 387
F+DEIDAVGR RG G GGGNDEREQTLNQLL EMDGFE N G+I+IAATNR D+LD ALL
Sbjct: 254 FIDEIDAVGRHRGVGFGGGNDEREQTLNQLLVEMDGFEANEGVIIIAATNRPDVLDPALL 313
Query: 388 RPGRFDRQV 396
RPGRFDRQ+
Sbjct: 314 RPGRFDRQI 322
>sp|P0AAI3|FTSH_ECOLI ATP-dependent zinc metalloprotease FtsH OS=Escherichia coli (strain
K12) GN=ftsH PE=1 SV=1
Length = 644
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 167/303 (55%), Positives = 213/303 (70%), Gaps = 17/303 (5%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENG-TIAIVEAISPELGNRVQRVRVQLPGLSQELLQKF 153
++ YS FL+ ++ D+V++ + NG I + + S R +P +LL
Sbjct: 31 KVDYSTFLQEVNNDQVREARI--NGREINVTKKDS-------NRYTTYIPVQDPKLLDNL 81
Query: 154 REKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAF 213
KN+ +E S L I FP++L+ G+++ R G GG G ++F
Sbjct: 82 LTKNVKVVGEPPEEPS---LLASIFISWFPMLLLIGVWIFFMRQMQGGGGKGA----MSF 134
Query: 214 GQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPP 273
G+SKA+ E TF DVAG DEAK++ E+VE+L++P RF +G +IPKGVL+VGPP
Sbjct: 135 GKSKARMLTEDQIKTTFADVAGCDEAKEEVAELVEYLREPSRFQKLGGKIPKGVLMVGPP 194
Query: 274 GTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEID 333
GTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F++AK+ APCI+F+DEID
Sbjct: 195 GTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEID 254
Query: 334 AVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFD 393
AVGRQRG G+GGG+DEREQTLNQ+L EMDGFEGN GIIVIAATNR D+LD ALLRPGRFD
Sbjct: 255 AVGRQRGAGLGGGHDEREQTLNQMLVEMDGFEGNEGIIVIAATNRPDVLDPALLRPGRFD 314
Query: 394 RQV 396
RQV
Sbjct: 315 RQV 317
>sp|Q6MLS7|FTSH1_BDEBA ATP-dependent zinc metalloprotease FtsH 1 OS=Bdellovibrio
bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIB 9529
/ HD100) GN=ftsH1 PE=3 SV=1
Length = 645
Score = 315 bits (808), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 165/314 (52%), Positives = 217/314 (69%), Gaps = 8/314 (2%)
Query: 83 KAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQL 142
+AY +Q + + ++S+F E + V V F T +V + PE + +
Sbjct: 23 QAYESKQQKAIADFNFSKFTEAVKAGEVATV-TFRQDTSEVVGEMKPEFEKKYNGTHFSI 81
Query: 143 PGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMG 202
G +Q+ KF +++ + + D+G +L+ N PLILI +FL R G
Sbjct: 82 VGNTQDEGYKFLQQH-GITPNYERADNGGFFQSLLVNW-LPLILIVAMFLFIMRQIQAGG 139
Query: 203 GPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGAR 262
G ++FG+S+A+ E VTF +VAGVDEAK+D E+V FLK P+++T +G R
Sbjct: 140 GKA-----MSFGKSRARLLTEHKNRVTFKEVAGVDEAKEDLQEIVSFLKDPKKYTKLGGR 194
Query: 263 IPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKEN 322
IPKGVLLVG PGTGKTLLA+A+AGEAGVPFF+ISGS+FVEMFVGVGASRVRDLF++ K+N
Sbjct: 195 IPKGVLLVGSPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQGKKN 254
Query: 323 APCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADIL 382
APC++F+DEIDAVGR RG G+GGG+DEREQTLNQLL EMDGFE + G+I+IAATNR D+L
Sbjct: 255 APCLIFIDEIDAVGRHRGAGMGGGHDEREQTLNQLLVEMDGFESSEGVIMIAATNRPDVL 314
Query: 383 DSALLRPGRFDRQV 396
D ALLRPGRFDR+V
Sbjct: 315 DPALLRPGRFDRRV 328
>sp|Q8K9G8|FTSH_BUCAP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=ftsH PE=3 SV=1
Length = 613
Score = 314 bits (804), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 223/323 (69%), Gaps = 15/323 (4%)
Query: 74 VGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGN 133
V T +L S + S+ R+ YS FL +++D+V++ + NG I + +
Sbjct: 10 VITVVLMSVFQNFNSSDTSNHRVDYSTFLSEVNQDQVREA--YINGRI--ISVTKKDSSK 65
Query: 134 RVQRVRVQLPGLSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLL 193
+ + + P L LL K N+ +E S LL ++ + FP++L+ G+++
Sbjct: 66 YITYIPINDPKLLDNLLTK----NVKIVGEIPEEPS--LLISIFISW-FPMLLLIGVWIF 118
Query: 194 SRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKP 253
R GG G ++FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P
Sbjct: 119 FMRQMQMGGGKGA----MSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEP 174
Query: 254 ERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVR 313
RF +G +IPKG+L+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVR
Sbjct: 175 SRFQKLGGKIPKGILMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVR 234
Query: 314 DLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVI 373
D+F+ A+++APCI+F+DEIDAVGRQRG G+GGG+DEREQTLNQ+L EMDGF+GN G+I+I
Sbjct: 235 DMFEHARKSAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGVILI 294
Query: 374 AATNRADILDSALLRPGRFDRQV 396
AATNR D+LD ALLRPGRFDRQV
Sbjct: 295 AATNRPDVLDPALLRPGRFDRQV 317
>sp|Q89AF2|FTSH_BUCBP ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=ftsH PE=3 SV=1
Length = 610
Score = 311 bits (796), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 160/308 (51%), Positives = 215/308 (69%), Gaps = 15/308 (4%)
Query: 89 QGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQE 148
+++ ++ YS FL +++D+V++V + + I + G + + + P L
Sbjct: 25 NNINNRKIDYSTFLSDVNQDQVREVHISGRE----MNIIRKDNGRYITYIPISDPKLLDN 80
Query: 149 LLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPG 208
LL K N+ +E S F I FP++L+ G+++ R GG G
Sbjct: 81 LLVK----NVKIIGAAPEEQS---FFTAIFISWFPMLLLIGVWVFFMRQMQVGGGKGA-- 131
Query: 209 FPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVL 268
++FG+SKA+ E +TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L
Sbjct: 132 --MSFGKSKARMLPEDQVKITFSDVAGCDEAKEEVQELVEYLKEPSRFQKLGGKIPKGIL 189
Query: 269 LVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVF 328
+VGPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ +++ APCI+F
Sbjct: 190 MVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKVAPCIIF 249
Query: 329 VDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLR 388
+DEIDAVGRQRG G+GGG+DEREQTLNQ+L EMDGF+GN GII+IAATNR D+LD ALLR
Sbjct: 250 IDEIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLR 309
Query: 389 PGRFDRQV 396
PGRFDRQ+
Sbjct: 310 PGRFDRQI 317
>sp|Q67JH0|FTSH3_SYMTH ATP-dependent zinc metalloprotease FtsH 3 OS=Symbiobacterium
thermophilum (strain T / IAM 14863) GN=ftsH3 PE=3 SV=1
Length = 626
Score = 307 bits (787), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 171/338 (50%), Positives = 228/338 (67%), Gaps = 31/338 (9%)
Query: 64 FLKKLVGNVGVGTALLGSGKAYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAI 123
++ LV +V + L G+ + ++++ YS + Y+ + V+ + L +G A
Sbjct: 11 YMLILVISVAIAVQLGGTSQ--------QTTQLVYSDLVRYIQQGEVRSITL--SGAYAE 60
Query: 124 VEAISPELGNRVQRVRVQLPGLSQ-----ELLQKFREKNIDFAAHNAQEDSGSLLFNLIG 178
E +S E + VQLP S E+LQ+ +DF ++D+ S ++ ++
Sbjct: 61 GELVSGE------KFTVQLPPSSSQAPLVEMLQQHPNIKLDF-----RQDNTSGIWAMLL 109
Query: 179 NLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDE 238
P++L+ F + + G G + FG+S+A+ + VTFDDVAG+DE
Sbjct: 110 QTLVPVVLVLLAFFFIMQQTQGSGN-----RVMQFGKSRARLVTDDRKRVTFDDVAGIDE 164
Query: 239 AKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGS 298
K++ E+V+FLK P+R+ +GARIPKGVLL GPPGTGKTLLAKA+AGEAGVPFFSISGS
Sbjct: 165 VKEELAEIVDFLKHPKRYLELGARIPKGVLLYGPPGTGKTLLAKAVAGEAGVPFFSISGS 224
Query: 299 EFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLL 358
+FVEMFVGVGASRVRDLF++AK+N+PCIVF+DEIDAVGRQRG G GGG+DEREQTLNQLL
Sbjct: 225 DFVEMFVGVGASRVRDLFEQAKKNSPCIVFIDEIDAVGRQRGAGYGGGHDEREQTLNQLL 284
Query: 359 TEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
EMDGF N GII+IAATNR D+LD ALLRPGRFDRQ+
Sbjct: 285 VEMDGFSANEGIIIIAATNRPDVLDPALLRPGRFDRQI 322
>sp|P57462|FTSH_BUCAI ATP-dependent zinc metalloprotease FtsH OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=ftsH PE=3
SV=2
Length = 611
Score = 307 bits (787), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 161/306 (52%), Positives = 218/306 (71%), Gaps = 15/306 (4%)
Query: 91 VSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELL 150
V++ ++ YS FL +++D++++ + NG + + + + + P L LL
Sbjct: 27 VNNHKVDYSTFLSEVNQDQIREA--YINGRM--ISVTKKDSSKYTTYIPINDPKLLDNLL 82
Query: 151 QKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
K R K I A + SL +++ + FP++L+ G+++ R GG G
Sbjct: 83 VK-RVKII-----GAIPEEPSLFISILISW-FPMLLLIGVWIFFMRQMQMGGGKGA---- 131
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+SKA+ E TF DVAG DEAK++ E+VE+LK+P RF +G +IPKG+L+V
Sbjct: 132 MSFGKSKARMLSEDQIQTTFADVAGCDEAKEEVSELVEYLKEPSRFQKLGGKIPKGILMV 191
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKAIAGEA VPFF+ISGS+FVEMFVGVGASRVRD+F+ ++++APCI+F+D
Sbjct: 192 GPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEHSRKSAPCIIFID 251
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRG G+GGG+DEREQTLNQ+L EMDGF+GN GII+IAATNR D+LD ALLRPG
Sbjct: 252 EIDAVGRQRGAGLGGGHDEREQTLNQMLVEMDGFDGNEGIILIAATNRPDVLDPALLRPG 311
Query: 391 RFDRQV 396
RFDRQV
Sbjct: 312 RFDRQV 317
>sp|P94304|FTSH_BACPE ATP-dependent zinc metalloprotease FtsH OS=Bacillus pseudofirmus
(strain OF4) GN=ftsH PE=3 SV=2
Length = 679
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 148/193 (76%), Positives = 166/193 (86%)
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
GG + FG+SKAK E F DVAG DE KQ+ +EVVEFLK P +F+AIGARIP
Sbjct: 140 GGGSRVMNFGKSKAKMVNEDKKKAKFKDVAGADEEKQELVEVVEFLKDPRKFSAIGARIP 199
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KGVLLVGPPGTGKTLLA+A+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP
Sbjct: 200 KGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 259
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
CI+F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII+IAATNRADILD
Sbjct: 260 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 319
Query: 385 ALLRPGRFDRQVK 397
ALLRPGRFDRQ++
Sbjct: 320 ALLRPGRFDRQIQ 332
>sp|B0K5A3|FTSH1_THEPX ATP-dependent zinc metalloprotease FtsH 1 OS=Thermoanaerobacter sp.
(strain X514) GN=ftsH1 PE=3 SV=1
Length = 611
Score = 307 bits (786), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 170/328 (51%), Positives = 225/328 (68%), Gaps = 21/328 (6%)
Query: 96 MSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFRE 155
+ Y + ++Y+D ++VK + L N +++ E +RV V + ++ +LQ
Sbjct: 38 IDYGQLIKYIDANQVKSITLVGNDVKGVLKN-GTEFKSRVPDVTNFMSFVNPYILQG--- 93
Query: 156 KNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQ 215
+DF + + ++ +L +I I ++ +++ GG G ++FG+
Sbjct: 94 -KLDFKSE--PQVGPPWWVQMLPSLFLIVIFIIFWYIFMQQAQGGGGSK-----VMSFGK 145
Query: 216 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGT 275
S+A+ + + VTF+DVAG DE K++ E+VEFLK P++F +GARIPKGVLLVGPPGT
Sbjct: 146 SRARMITDKDKRVTFNDVAGADEEKEELQEIVEFLKYPKKFLELGARIPKGVLLVGPPGT 205
Query: 276 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 335
GKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGA+RVRDLF +AK+NAPCIVF+DEIDAV
Sbjct: 206 GKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGAARVRDLFDQAKKNAPCIVFIDEIDAV 265
Query: 336 GRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQ 395
GRQRG G+GGG+DEREQTLNQLL EMDGF N GIIVIAATNR DILD ALLRPGRFDR
Sbjct: 266 GRQRGAGLGGGHDEREQTLNQLLVEMDGFSVNEGIIVIAATNRPDILDPALLRPGRFDR- 324
Query: 396 VKHVSLSL-----MLWFLKTHSQYKDPL 418
H+++ + LK HS+ K PL
Sbjct: 325 --HITVGIPDIKGREEILKIHSRNK-PL 349
>sp|B8D065|FTSH_HALOH ATP-dependent zinc metalloprotease FtsH OS=Halothermothrix orenii
(strain H 168 / OCM 544 / DSM 9562) GN=ftsH PE=3 SV=1
Length = 630
Score = 305 bits (782), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 159/300 (53%), Positives = 212/300 (70%), Gaps = 16/300 (5%)
Query: 97 SYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFREK 156
+YS + Y+++ ++ +V + N EA+ +R V + P +L+ + RE
Sbjct: 45 TYSDLINYVEQGKINEVTIIGN------EAVKGTYNHREFNVPIP-PEAVPDLMAELREA 97
Query: 157 NIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQS 216
+++ E + ++ + ++LIG F + +R GG G ++FG+S
Sbjct: 98 DVEIKTE--PEPTAPWWTGMLAYILPIILLIGAWFFIMQRMQGG-----GSQM-MSFGKS 149
Query: 217 KAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGTG 276
+A+ E VTF+DVA +E K++ EVVEFLK P++FT +GA++PKGVLLVGPPGTG
Sbjct: 150 RARLS-ENGKKVTFEDVANYEEVKEELQEVVEFLKNPDKFTRMGAKVPKGVLLVGPPGTG 208
Query: 277 KTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAVG 336
KTLLA+A+AGEAGVPFF ISGS+FVEMFVGVGASRVRDLF++ K+NAPCI+F+DE+DAVG
Sbjct: 209 KTLLARAVAGEAGVPFFIISGSDFVEMFVGVGASRVRDLFEQGKKNAPCIIFIDELDAVG 268
Query: 337 RQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQV 396
RQRG G+GGG+DEREQTLNQLL EMDGFE N GIIV+AATNR D+LD ALLRPGRFDRQV
Sbjct: 269 RQRGAGLGGGHDEREQTLNQLLVEMDGFEPNEGIIVMAATNRPDVLDPALLRPGRFDRQV 328
>sp|A0PXM8|FTSH_CLONN ATP-dependent zinc metalloprotease FtsH OS=Clostridium novyi
(strain NT) GN=ftsH PE=3 SV=1
Length = 676
Score = 305 bits (782), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 164/312 (52%), Positives = 225/312 (72%), Gaps = 13/312 (4%)
Query: 88 EQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQ-RVRVQLPG-- 144
E +S +SY+ F +Y +++V +V++ ++G ++ EL ++ + + +V +P
Sbjct: 32 ESSKTSGAISYNEFKKYWIENKVSRVEIKQDG-----RTVAGELNDKAKTQFQVVVPQSL 86
Query: 145 LSQELLQKFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGP 204
L Q++L + +++ A S + + I + L+++G + ++S GG GG
Sbjct: 87 LVQDILVNNPKSSVNVKFEPAS--SMPMWISWIPTIILILVMVGFWVMFMQQSQGGGGGN 144
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
G + FG+S+AK + VTF DVAG DE K + E+V+FLK+P+++ +GARIP
Sbjct: 145 RGV---MNFGKSRAKLATPDSQKVTFKDVAGADEEKGELEEIVDFLKEPKKYLDMGARIP 201
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KG+LLVGPPGTGKTLLAKA+AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF++AK+N+P
Sbjct: 202 KGILLVGPPGTGKTLLAKAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNSP 261
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
CI+F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII++AATNR DILD
Sbjct: 262 CIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFGVNEGIILVAATNRPDILDK 321
Query: 385 ALLRPGRFDRQV 396
ALLRPGRFDRQ+
Sbjct: 322 ALLRPGRFDRQI 333
>sp|B9KXV3|FTSH1_THERP ATP-dependent zinc metalloprotease FtsH 1 OS=Thermomicrobium roseum
(strain ATCC 27502 / DSM 5159 / P-2) GN=ftsH1 PE=3 SV=1
Length = 652
Score = 305 bits (780), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 173/207 (83%), Gaps = 2/207 (0%)
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
L+FG+S+A+ VTFDDVAGVDEAK++ E+VEFLK PE+F A+GARIP+GVLLV
Sbjct: 143 LSFGKSRARVFTSNRPTVTFDDVAGVDEAKEELQEIVEFLKYPEKFAALGARIPRGVLLV 202
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLL++A+AGEAGVPFFSISGSEFVEMFVGVGASRVRDLF +AK NAPCIVF+D
Sbjct: 203 GPPGTGKTLLSRAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFDQAKRNAPCIVFID 262
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGRQRG G+GG +DEREQTLNQ+L EMDGF+ +T +IVIAATNR D+LD ALLRPG
Sbjct: 263 EIDAVGRQRGAGLGGSHDEREQTLNQILVEMDGFDSSTNVIVIAATNRPDVLDPALLRPG 322
Query: 391 RFDRQV--KHVSLSLMLWFLKTHSQYK 415
RFDRQV L L LK H++ K
Sbjct: 323 RFDRQVVLDRPDLHGRLAILKVHTRGK 349
>sp|B8I4B9|FTSH_CLOCE ATP-dependent zinc metalloprotease FtsH OS=Clostridium
cellulolyticum (strain ATCC 35319 / DSM 5812 / JCM 6584
/ H10) GN=ftsH PE=3 SV=1
Length = 619
Score = 305 bits (780), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 168/306 (54%), Positives = 212/306 (69%), Gaps = 12/306 (3%)
Query: 95 RMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGL---SQELLQ 151
+MSYS L + VK + L A +E P+ NR + V + P + S+
Sbjct: 32 KMSYSELLTEMKAGNVKSIGL--QTDTATIELKKPKENNRTKFVVIVPPDVTSASERFTA 89
Query: 152 KFREKNI-DFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFP 210
K I DF H Q +++ + +ILI F ++S GG GG
Sbjct: 90 ALDNKLIEDF--HVTQPPQPPWWVSMLPTVGLVIILILIWFFFIQQSQGGGGG----NRV 143
Query: 211 LAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLV 270
++FG+S+AK ++ +TF++VAG DE K++ E+VEFLK P++F +GARIPKGVLLV
Sbjct: 144 MSFGKSRAKMTVDDKKKITFENVAGADEEKEELAEIVEFLKAPKKFVELGARIPKGVLLV 203
Query: 271 GPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVD 330
GPPGTGKTLLAKA++GEAGVPFFSISGS+FVEMFVGVGASRVRDLF++AK+NAPCIVF+D
Sbjct: 204 GPPGTGKTLLAKAVSGEAGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFID 263
Query: 331 EIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPG 390
EIDAVGR RG G+GGG+DEREQTLNQLL EMDGF N G+I++AATNR DILD ALLRPG
Sbjct: 264 EIDAVGRHRGAGLGGGHDEREQTLNQLLVEMDGFGINEGVIILAATNRPDILDPALLRPG 323
Query: 391 RFDRQV 396
RFDR+V
Sbjct: 324 RFDRRV 329
>sp|P37476|FTSH_BACSU ATP-dependent zinc metalloprotease FtsH OS=Bacillus subtilis
(strain 168) GN=ftsH PE=1 SV=1
Length = 637
Score = 304 bits (779), Expect = 7e-82, Method: Compositional matrix adjust.
Identities = 147/192 (76%), Positives = 163/192 (84%)
Query: 205 GGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIP 264
GG + FG+SKAK E V F DVAG DE KQ+ +EVVEFLK P +F +GARIP
Sbjct: 135 GGGSRVMNFGKSKAKLYTEEKKRVKFKDVAGADEEKQELVEVVEFLKDPRKFAELGARIP 194
Query: 265 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 324
KGVLLVGPPGTGKTLLAKA AGEAGVPFFSISGS+FVEMFVGVGASRVRDLF+ AK+NAP
Sbjct: 195 KGVLLVGPPGTGKTLLAKACAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAP 254
Query: 325 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDS 384
C++F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII+IAATNRADILD
Sbjct: 255 CLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQLLVEMDGFSANEGIIIIAATNRADILDP 314
Query: 385 ALLRPGRFDRQV 396
ALLRPGRFDRQ+
Sbjct: 315 ALLRPGRFDRQI 326
>sp|Q1LLA9|FTSH_RALME ATP-dependent zinc metalloprotease FtsH OS=Ralstonia metallidurans
(strain CH34 / ATCC 43123 / DSM 2839) GN=ftsH PE=3 SV=1
Length = 649
Score = 303 bits (777), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 158/301 (52%), Positives = 210/301 (69%), Gaps = 16/301 (5%)
Query: 96 MSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQKFRE 155
++YS+F++ +V +VD+ + +SP+ G++ + + +L++
Sbjct: 51 VTYSQFMDDAKNGKVSRVDVQGRNLV-----VSPKEGSKYTIISPGDIWMVGDLMK---- 101
Query: 156 KNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPLAFGQ 215
+D ++L + L L++I F + R+ GG G G +FG+
Sbjct: 102 --YGVQVTGKADDEPNVLVQALYYLGPTLLIIVFWFYMMRQMQGG-----GKGGAFSFGK 154
Query: 216 SKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVGPPGT 275
S+A+ E VTF DVAG DE+K++ +E+V+FLK P++F +G RIP+GVLLVGPPGT
Sbjct: 155 SRARLIDENQNAVTFADVAGCDESKEEVVELVDFLKDPQKFQKLGGRIPRGVLLVGPPGT 214
Query: 276 GKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEIDAV 335
GKTLLA+AIAGEA VPFFSISGS+FVEMFVGVGA+RVRD+F+ AK+ APCIVF+DEIDAV
Sbjct: 215 GKTLLARAIAGEAKVPFFSISGSDFVEMFVGVGAARVRDMFENAKKQAPCIVFIDEIDAV 274
Query: 336 GRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGRFDRQ 395
GR RG G+GGGNDEREQTLNQ+L EMDGFE N+G+IVIAATNRAD+LD ALLRPGRFDRQ
Sbjct: 275 GRHRGAGMGGGNDEREQTLNQMLVEMDGFEANSGVIVIAATNRADVLDKALLRPGRFDRQ 334
Query: 396 V 396
V
Sbjct: 335 V 335
>sp|Q4L3G8|FTSH_STAHJ ATP-dependent zinc metalloprotease FtsH OS=Staphylococcus
haemolyticus (strain JCSC1435) GN=ftsH PE=3 SV=1
Length = 727
Score = 302 bits (774), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 167/317 (52%), Positives = 222/317 (70%), Gaps = 11/317 (3%)
Query: 84 AYADEQGVSSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLP 143
+Y + G + ++SYS+F+E LDK +K +++ + +V + + +
Sbjct: 23 SYINGNGNTPKQLSYSQFVEKLDKGDLKTLEIQPEQNVYLVSGKTKNDEDYSSTILYNNE 82
Query: 144 GLSQELLQKFR-EKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFL--LSRRSSGG 200
Q++ + + +K +DF +E+ S+ +++ L P+++I LF+ LS+ GG
Sbjct: 83 KDLQKITNEAKSQKGLDFKV--KEEEKQSVFVSMLTTL-IPVLIIAFLFIFFLSQAQGGG 139
Query: 201 MGGPGGPGFPLAFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIG 260
GG + FG+SKAK V F DVAG DE KQ+ +E+V+FLK ++F +G
Sbjct: 140 GGGR-----MMNFGKSKAKMYDNQKRRVRFSDVAGADEEKQELIEIVDFLKDNKKFKQMG 194
Query: 261 ARIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAK 320
+RIPKGVLLVGPPGTGKTLLA+A+AGEAG PFFSISGS+FVEMFVGVGASRVRDLF+ AK
Sbjct: 195 SRIPKGVLLVGPPGTGKTLLARAVAGEAGAPFFSISGSDFVEMFVGVGASRVRDLFENAK 254
Query: 321 ENAPCIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRAD 380
+NAPCI+F+DEIDAVGRQRG G+GGG+DEREQTLNQLL EMDGF N GII+IAATNR D
Sbjct: 255 KNAPCIIFIDEIDAVGRQRGAGVGGGHDEREQTLNQLLVEMDGFGENEGIIMIAATNRPD 314
Query: 381 ILDSALLRPGRFDRQVK 397
ILD ALLRPGRFDRQ++
Sbjct: 315 ILDPALLRPGRFDRQIQ 331
>sp|Q1RGP0|FTSH_RICBR ATP-dependent zinc metalloprotease FtsH OS=Rickettsia bellii
(strain RML369-C) GN=ftsH PE=3 SV=1
Length = 638
Score = 301 bits (772), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 158/305 (51%), Positives = 207/305 (67%), Gaps = 17/305 (5%)
Query: 92 SSSRMSYSRFLEYLDKDRVKKVDLFENGTIAIVEAISPELGNRVQRVRVQLPGLSQELLQ 151
S + +S+S FL +D+ V V + G I +E S + G+ P +L+
Sbjct: 33 SKNNISFSEFLTKVDEKTVNSVKI--QGRI--IEGTSND-GSSFSTYAPDYP----DLVN 83
Query: 152 KFREKNIDFAAHNAQEDSGSLLFNLIGNLAFPLILIGGLFLLSRRSSGGMGGPGGPGFPL 211
+ +++ + + L LI FP++L+ G+++ R G G G
Sbjct: 84 RLNNNDVNIEVVPPETRMNTFLSFLIS--WFPMLLLIGVWVFFMRQMHGGGKAMG----- 136
Query: 212 AFGQSKAKFQMEPNTGVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAIGARIPKGVLLVG 271
FG+SKAK + +TF DVAG+DEAK + E+V+FL+ P +F +G +IPKG LL+G
Sbjct: 137 -FGKSKAKLLSDKGPKITFKDVAGIDEAKDELTEIVDFLRDPSKFQKLGGKIPKGCLLIG 195
Query: 272 PPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDE 331
PPGTGKTLLAKAIAGEA VPFFSISGS+FVEMFVGVGASRVRD+F++ K NAPCI+F+DE
Sbjct: 196 PPGTGKTLLAKAIAGEANVPFFSISGSDFVEMFVGVGASRVRDMFEQGKRNAPCIIFIDE 255
Query: 332 IDAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGIIVIAATNRADILDSALLRPGR 391
IDAVGR RG G+GGGNDEREQTLNQ+L EMDGFE N G+++IAATNR D+LD+ALLRPGR
Sbjct: 256 IDAVGRHRGIGMGGGNDEREQTLNQMLVEMDGFEANEGVVIIAATNRPDVLDNALLRPGR 315
Query: 392 FDRQV 396
FDRQ+
Sbjct: 316 FDRQI 320
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 160,655,358
Number of Sequences: 539616
Number of extensions: 7329563
Number of successful extensions: 37201
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2488
Number of HSP's successfully gapped in prelim test: 456
Number of HSP's that attempted gapping in prelim test: 32732
Number of HSP's gapped (non-prelim): 3491
length of query: 418
length of database: 191,569,459
effective HSP length: 120
effective length of query: 298
effective length of database: 126,815,539
effective search space: 37791030622
effective search space used: 37791030622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)