Query 014800
Match_columns 418
No_of_seqs 367 out of 2586
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 18:03:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014800.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014800hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 3.4E-67 1.2E-71 518.2 20.4 281 8-361 24-315 (329)
2 1nlt_A Protein YDJ1, mitochond 100.0 3.7E-64 1.3E-68 479.3 25.0 242 114-357 7-248 (248)
3 3agx_A DNAJ homolog subfamily 100.0 2.3E-46 7.9E-51 340.4 20.2 180 118-362 2-181 (181)
4 2q2g_A HSP40 protein, heat sho 100.0 1.9E-44 6.6E-49 327.6 22.1 177 118-361 3-180 (180)
5 1c3g_A Heat shock protein 40; 100.0 5.5E-41 1.9E-45 302.1 17.5 169 119-357 1-170 (170)
6 1xao_A YDJ1, mitochondrial pro 100.0 3.6E-29 1.2E-33 212.6 13.9 120 264-386 1-120 (121)
7 3i38_A Putative chaperone DNAJ 99.9 1.8E-25 6E-30 186.2 9.8 95 260-362 2-96 (109)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.8E-25 6.3E-30 184.5 5.1 90 11-100 2-98 (103)
9 2och_A Hypothetical protein DN 99.9 3.8E-24 1.3E-28 165.5 3.9 70 7-76 3-73 (73)
10 2o37_A Protein SIS1; HSP40, J- 99.9 5E-24 1.7E-28 172.3 4.4 75 7-81 3-78 (92)
11 1hdj_A Human HSP40, HDJ-1; mol 99.9 8.2E-24 2.8E-28 165.3 4.7 70 11-80 2-74 (77)
12 2ctr_A DNAJ homolog subfamily 99.9 1.8E-23 6.3E-28 167.6 5.4 72 10-81 5-79 (88)
13 2ej7_A HCG3 gene; HCG3 protein 99.9 5.1E-23 1.7E-27 162.8 4.6 70 9-78 6-80 (82)
14 2ctp_A DNAJ homolog subfamily 99.9 5.4E-23 1.9E-27 161.1 3.4 69 9-77 4-75 (78)
15 2dn9_A DNAJ homolog subfamily 99.9 6.4E-23 2.2E-27 161.0 3.6 68 10-77 5-76 (79)
16 2dmx_A DNAJ homolog subfamily 99.9 1E-22 3.5E-27 164.6 4.1 71 10-80 7-82 (92)
17 2cug_A Mkiaa0962 protein; DNAJ 99.9 1.1E-22 3.8E-27 163.0 3.6 68 9-76 14-84 (88)
18 2yua_A Williams-beuren syndrom 99.9 3.4E-22 1.2E-26 163.7 5.5 72 8-79 13-90 (99)
19 2lgw_A DNAJ homolog subfamily 99.9 1.1E-22 3.7E-27 166.5 2.3 69 12-80 2-75 (99)
20 2ctq_A DNAJ homolog subfamily 99.8 1.6E-22 5.6E-27 169.3 3.2 72 8-79 16-91 (112)
21 2ctw_A DNAJ homolog subfamily 99.8 5.5E-22 1.9E-26 165.3 4.7 72 8-79 13-88 (109)
22 1wjz_A 1700030A21RIK protein; 99.8 1.3E-21 4.3E-26 158.7 3.1 68 8-75 12-89 (94)
23 1gh6_A Large T antigen; tumor 99.8 9.5E-22 3.3E-26 164.6 0.5 65 11-75 7-73 (114)
24 2ctt_A DNAJ homolog subfamily 99.8 4E-21 1.4E-25 158.7 4.2 101 119-226 2-103 (104)
25 1faf_A Large T antigen; J doma 99.8 4.2E-21 1.4E-25 150.6 2.0 66 11-77 10-77 (79)
26 3apq_A DNAJ homolog subfamily 99.8 4.2E-21 1.4E-25 177.3 2.3 70 12-81 2-75 (210)
27 2pf4_E Small T antigen; PP2A, 99.8 2.5E-21 8.5E-26 173.0 0.0 66 10-75 9-76 (174)
28 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 4.4E-21 1.5E-25 159.8 1.4 68 8-75 11-86 (109)
29 2ys8_A RAB-related GTP-binding 99.8 2.2E-20 7.4E-25 150.3 3.3 61 9-69 24-87 (90)
30 2l6l_A DNAJ homolog subfamily 99.8 8.4E-20 2.9E-24 161.5 3.5 67 9-75 7-83 (155)
31 2guz_A Mitochondrial import in 99.7 3.9E-19 1.3E-23 136.5 3.6 60 9-68 11-71 (71)
32 1iur_A KIAA0730 protein; DNAJ 99.7 2.8E-19 9.6E-24 142.8 2.0 63 8-70 12-79 (88)
33 3ag7_A Putative uncharacterize 99.7 1.3E-18 4.5E-23 143.7 1.4 58 8-66 37-105 (106)
34 2qwo_B Putative tyrosine-prote 99.7 1.5E-18 5E-23 139.2 1.5 52 12-63 33-91 (92)
35 3apo_A DNAJ homolog subfamily 99.7 1.1E-18 3.8E-23 190.7 0.9 74 8-81 17-94 (780)
36 1n4c_A Auxilin; four helix bun 99.7 2.9E-18 9.9E-23 154.0 2.8 60 11-70 116-182 (182)
37 3hho_A CO-chaperone protein HS 99.7 2.7E-18 9.3E-23 154.5 2.3 63 11-73 3-76 (174)
38 1fpo_A HSC20, chaperone protei 99.7 2.8E-18 9.7E-23 153.9 1.4 62 13-74 2-74 (171)
39 3bvo_A CO-chaperone protein HS 99.7 5.7E-18 1.9E-22 156.2 2.4 62 11-72 42-114 (207)
40 3uo3_A J-type CO-chaperone JAC 99.7 1.7E-17 5.7E-22 150.0 3.7 64 10-73 9-80 (181)
41 1exk_A DNAJ protein; extended 99.5 3.9E-14 1.4E-18 110.7 7.2 77 135-218 1-78 (79)
42 1nlt_A Protein YDJ1, mitochond 99.4 9E-13 3.1E-17 125.0 9.1 130 131-273 42-247 (248)
43 2y4t_A DNAJ homolog subfamily 99.1 2.1E-11 7.3E-16 121.6 4.6 62 11-72 381-449 (450)
44 2guz_B Mitochondrial import in 99.0 9.3E-11 3.2E-15 87.6 3.8 51 13-63 5-58 (65)
45 3i38_A Putative chaperone DNAJ 98.8 3.8E-09 1.3E-13 87.4 5.4 53 222-275 40-92 (109)
46 1xao_A YDJ1, mitochondrial pro 98.7 2.4E-08 8.2E-13 84.1 5.9 55 221-275 35-94 (121)
47 1c3g_A Heat shock protein 40; 98.5 1.5E-07 5.3E-12 83.8 7.6 70 271-343 2-79 (170)
48 2q2g_A HSP40 protein, heat sho 98.5 1.9E-07 6.6E-12 84.0 8.0 71 269-342 3-84 (180)
49 3lz8_A Putative chaperone DNAJ 98.4 2.4E-07 8.2E-12 91.0 6.8 73 267-342 138-223 (329)
50 3agx_A DNAJ homolog subfamily 98.4 6.2E-07 2.1E-11 80.7 8.6 72 269-344 2-86 (181)
51 3lcz_A YCZA, inhibitor of trap 97.8 2.6E-06 8.9E-11 60.7 0.0 33 185-219 6-38 (53)
52 1exk_A DNAJ protein; extended 97.8 6.8E-06 2.3E-10 63.5 1.7 57 131-201 15-77 (79)
53 2ctt_A DNAJ homolog subfamily 97.7 1.5E-05 5.1E-10 65.0 2.6 58 131-202 32-95 (104)
54 3pmq_A Decaheme cytochrome C M 97.3 2.1E-06 7.2E-11 91.0 -9.1 78 122-199 168-257 (669)
55 3lcz_A YCZA, inhibitor of trap 96.9 0.00027 9.3E-09 50.2 1.4 26 146-173 10-35 (53)
56 2bx9_A Anti-trap, AT, tryptoph 96.9 0.00028 9.7E-09 50.1 1.4 26 146-173 10-35 (53)
57 2bx9_A Anti-trap, AT, tryptoph 96.8 0.00055 1.9E-08 48.6 2.0 11 163-173 11-21 (53)
58 2pzi_A Probable serine/threoni 92.4 0.053 1.8E-06 57.7 2.7 48 9-60 626-675 (681)
59 2vl6_A SSO MCM N-TER, minichro 63.3 30 0.001 32.0 9.1 65 188-259 168-236 (268)
60 1ltl_A DNA replication initiat 62.0 53 0.0018 30.5 10.6 85 162-259 135-223 (279)
61 3jt0_A Lamin-B1; structural ge 59.2 17 0.00057 30.7 5.9 52 283-337 51-102 (144)
62 2lll_A Lamin-B2; immunoglobuli 52.1 22 0.00075 29.8 5.4 51 283-336 47-98 (139)
63 2pk2_A Cyclin-T1, protein TAT; 45.9 26 0.00088 34.1 5.6 28 11-40 218-245 (358)
64 3pmq_A Decaheme cytochrome C M 43.7 2.6 8.9E-05 44.7 -2.1 47 162-215 192-257 (669)
65 2hcz_X Beta-expansin 1A; domai 42.5 1.2E+02 0.0042 27.6 9.4 57 254-315 174-238 (245)
66 3hn9_A Lamin-B1; structural ge 42.2 52 0.0018 26.8 6.1 52 283-337 38-89 (123)
67 1ifr_A Lamin A/C; immunoglobul 41.2 45 0.0015 27.1 5.5 51 283-336 32-83 (121)
68 1uzc_A Hypothetical protein FL 41.0 24 0.00083 26.0 3.5 51 23-73 11-65 (71)
69 1ufg_A Lamin A, nuclear lamin; 37.3 58 0.002 27.6 5.8 52 283-337 63-115 (151)
70 2qkd_A Zinc finger protein ZPR 34.9 38 0.0013 33.6 4.8 36 162-197 221-258 (404)
71 2bx2_L Ribonuclease E, RNAse E 34.0 7.1 0.00024 40.1 -0.6 32 171-202 390-422 (517)
72 1ltl_A DNA replication initiat 31.4 44 0.0015 31.1 4.5 15 23-37 8-22 (279)
73 2cqn_A Formin-binding protein 30.9 25 0.00085 26.3 2.1 49 25-74 7-62 (77)
74 2qkd_A Zinc finger protein ZPR 29.8 24 0.00084 34.9 2.5 36 162-197 13-50 (404)
75 2kdx_A HYPA, hydrogenase/ureas 27.4 50 0.0017 26.5 3.6 41 132-172 59-101 (119)
76 1qo8_A Flavocytochrome C3 fuma 27.2 7.4 0.00025 40.1 -1.9 66 147-214 14-86 (566)
77 2b7e_A PRE-mRNA processing pro 27.0 33 0.0011 24.3 2.1 47 27-73 3-55 (59)
78 2rq5_A Protein jumonji; develo 26.4 15 0.00051 30.1 0.2 22 51-72 90-111 (121)
79 2vf7_A UVRA2, excinuclease ABC 25.4 25 0.00086 38.3 1.8 33 163-199 640-672 (842)
80 3a43_A HYPD, hydrogenase nicke 25.2 35 0.0012 28.4 2.3 12 145-156 70-81 (139)
81 2v1y_A Phosphatidylinositol-4, 24.5 14 0.00047 29.7 -0.4 54 13-67 29-88 (108)
82 3vdz_A Ubiquitin-40S ribosomal 24.1 65 0.0022 25.3 3.7 40 268-307 14-56 (111)
83 2dgy_A MGC11102 protein; EIF-1 24.1 2.1E+02 0.0073 22.7 6.7 62 283-359 24-90 (111)
84 830c_A MMP-13, MMP-13; matrix 24.0 73 0.0025 27.3 4.2 51 2-55 4-54 (168)
85 1y0p_A Fumarate reductase flav 23.1 8.1 0.00028 39.8 -2.5 65 147-213 13-88 (571)
86 1ny9_A Transcriptional activat 22.8 69 0.0024 26.3 3.7 53 19-75 71-124 (143)
87 2r6f_A Excinuclease ABC subuni 22.2 38 0.0013 37.4 2.4 32 163-198 755-786 (972)
88 1n10_A PHL P I, pollen allerge 22.1 3E+02 0.01 24.9 8.2 27 287-315 210-238 (241)
89 3j20_Y 30S ribosomal protein S 22.0 58 0.002 22.1 2.5 7 189-195 38-44 (50)
90 1sif_A Ubiquitin; hydrophobic 20.8 76 0.0026 23.6 3.3 25 283-307 6-30 (88)
91 2apo_B Ribosome biogenesis pro 20.7 41 0.0014 24.0 1.5 21 189-213 7-27 (60)
92 1vq8_S 50S ribosomal protein L 20.1 48 0.0017 25.3 2.0 21 17-37 26-46 (85)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=3.4e-67 Score=518.21 Aligned_cols=281 Identities=27% Similarity=0.430 Sum_probs=157.9
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hhhHhhhhhhhhcCCccccccccccCchhhccCCC-
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMG- 83 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~---~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~~~~- 83 (418)
.+..+|||+||||+++||.+|||+|||+||++||||+|+++ ++|++|++||+||+||++|+.||+|+..+...+++
T Consensus 24 ~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~~~ 103 (329)
T 3lz8_A 24 AMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGFGR 103 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCccc
Confidence 34568999999999999999999999999999999999754 89999999999999999999999995443211111
Q ss_pred -----CCC-CCCCCCCccccccCCCCCCCCCCCCCcccccCceEEEeccchhhhhhccceeeeeeeeeeecCCCCCCCCc
Q 014800 84 -----GAG-AAHNPFDIFESFFGGGTFGAGGSSRGRRRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSK 157 (418)
Q Consensus 84 -----~~~-~~~~~~diF~~~Fggg~~~~g~~~~~~~~~~~~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~ 157 (418)
+++ ++.++.|||++|||+++++ ++.++++++.|+.++|.|||+|+|+|+++++.+++.+.| |
T Consensus 104 ~~~~~~~~f~~~~f~diF~~~Fg~~g~~----~~~~~~~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~----g---- 171 (329)
T 3lz8_A 104 QRQTHEQSYSQQDFDDIFSSMFGQQAHQ----RRRQHAARGHDLEIEVAVFLEETLAEQTRTISYNLPVYN----V---- 171 (329)
T ss_dssp -------------------------------------CCCCCCEEEEECCCTTGGGSCEEEEEEEEEEECC----S----
T ss_pred ccccccCCcCCCchhhhhHhhhcCcCCC----CCCCCcCCCCCEEEEEecchhhhhhccceEEEEEEEeec----C----
Confidence 111 1235778999999753211 112235678999999999999999999999999876532 1
Q ss_pred cCCcccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeEEecCCCCCccCCceEEEeeEEEEEEecCCCcCCCeee
Q 014800 158 SGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIA 237 (418)
Q Consensus 158 ~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~ 237 (418)
.| .+ .+...+.++|+||||+++|++|+
T Consensus 172 ------------~G---------------------------~v--------------~~~~~~~l~V~IP~Gv~~G~~Ir 198 (329)
T 3lz8_A 172 ------------FG---------------------------MI--------------ESETPKTLNVKIPAGVVDGQRIR 198 (329)
T ss_dssp ------------CC----------------------------C--------------CEEEEEEEEEEECTTCCTTCEEE
T ss_pred ------------Ce---------------------------EE--------------EEecceEEEEeCCCCCCCCCEEE
Confidence 11 11 12335689999999999999999
Q ss_pred ecCCcCCCC-CCCCccEEEEEEEecCCCccccccceeeeccCCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEE
Q 014800 238 FEGQADEAP-DTITGDIVFILQLKEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKA 316 (418)
Q Consensus 238 ~~G~G~~~~-g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~ 316 (418)
|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|+|+|||||+++.|+||||+ +.|+||+| ++||++++
T Consensus 199 l~G~G~~g~~gg~~GDL~v~I~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~g--t~~g~~~r 275 (329)
T 3lz8_A 199 LKGQGTPGENGGPNGDLWLVIHIAPHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLR 275 (329)
T ss_dssp ESSCSCCC---CCCCCEEEEECCCCCSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEE
T ss_pred EcccccCCCCCCCCCcEEEEEEEecCCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCC--CCCCCEEE
Confidence 999999974 678999999999999999999999999999999999999999999999998 69999999 69999999
Q ss_pred ecCCCCCCCCCCCCCCCeEEEEEEEcCCCCCCCHHHHHHHHhhCC
Q 014800 317 INDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLESVLP 361 (418)
Q Consensus 317 i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~~~l~~~~~~~L~~~lp 361 (418)
|+|+|||.. ..+|||||+|+|+||++ |+++|+++|+++..
T Consensus 276 l~G~GmP~~---~~rGDL~v~~~V~~P~~--l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 276 IKGKGLVSK---THTGDLFAVIKIVMPTK--PDEKARELWQQLAA 315 (329)
T ss_dssp ETTCSCBCS---SCBCCEEEEEEECCCSS--CCHHHHHHHHHHHH
T ss_pred EcCCCCCCC---CCCCCEEEEEEEECCCC--CCHHHHHHHHHHHh
Confidence 999999975 46899999999999999 99999999998864
No 2
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=3.7e-64 Score=479.28 Aligned_cols=242 Identities=45% Similarity=0.833 Sum_probs=219.7
Q ss_pred ccccCceEEEeccchhhhhhccceeeeeeeeeeecCCCCCCCCccCCcccCCCCCCccEEEEEEeeccceeeEEeeeCCC
Q 014800 114 RRKQGEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPE 193 (418)
Q Consensus 114 ~~~~~~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~ 193 (418)
+++++.|+.+.|.|||+|+|+|+++++.+++.+.|+.|+|+|++.++..+|+.|+|+|.++..+++|| |+++++.+|+.
T Consensus 7 ~~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~-~~~~~~~~C~~ 85 (248)
T 1nlt_A 7 GPQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGP-MIQRFQTECDV 85 (248)
T ss_dssp -CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSS-EEEEEECSCTT
T ss_pred CCCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCc-eEEEEEEcCCC
Confidence 34678999999999999999999999999999999999999999888788999999999999999999 99999999999
Q ss_pred CCCceeEEecCCCCCccCCceEEEeeEEEEEEecCCCcCCCeeeecCCcCCCCCCCCccEEEEEEEecCCCcccccccee
Q 014800 194 CRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLY 273 (418)
Q Consensus 194 C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~g~~~GDliv~i~~~~h~~f~R~g~dL~ 273 (418)
|+|+|+++..+++|+.|+|++++.+.++++|+||||+.+|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+|||
T Consensus 86 C~G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~ 165 (248)
T 1nlt_A 86 CHGTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLV 165 (248)
T ss_dssp CSSSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEE
T ss_pred CCCcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEE
Confidence 99999999778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeccCCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEcCCCCCCCHHHH
Q 014800 274 VDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQC 353 (418)
Q Consensus 274 ~~~~I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~~~l~~~~~ 353 (418)
++++|||+|||+|+++.|+||||+.+.|+||||++++||++++|+|+|||..+++ .+|||||+|+|+||+++|||++|+
T Consensus 166 ~~~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~ 244 (248)
T 1nlt_A 166 YEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENL 244 (248)
T ss_dssp EEEEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC---------
T ss_pred EEEEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHH
Confidence 9999999999999999999999998999999999999999999999999987544 689999999999999999999999
Q ss_pred HHHH
Q 014800 354 RTLE 357 (418)
Q Consensus 354 ~~L~ 357 (418)
++|+
T Consensus 245 ~~l~ 248 (248)
T 1nlt_A 245 KKLE 248 (248)
T ss_dssp ----
T ss_pred HhhC
Confidence 8875
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=2.3e-46 Score=340.40 Aligned_cols=180 Identities=37% Similarity=0.624 Sum_probs=160.2
Q ss_pred CceEEEeccchhhhhhccceeeeeeeeeeecCCCCCCCCccCCcccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCc
Q 014800 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGA 197 (418)
Q Consensus 118 ~~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 197 (418)
+.|+.++|.+||+|+|+|+++++.+++ +
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~---------------------------------------------~------- 29 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISH---------------------------------------------K------- 29 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEE---------------------------------------------E-------
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEec---------------------------------------------c-------
Confidence 357889999999999999999986542 1
Q ss_pred eeEEecCCCCCccCCceEEEeeEEEEEEecCCCcCCCeeeecCCcCCCCCCCCccEEEEEEEecCCCccccccceeeecc
Q 014800 198 GEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVDHT 277 (418)
Q Consensus 198 G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~ 277 (418)
|+.|+|++++.+.++++|+||||+++|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 30 ---------c~~c~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i~~~~h~~F~R~G~DL~~~~~ 100 (181)
T 3agx_A 30 ---------RLNPDGKSIRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVLKDKPHNIFKRDGSDVIYPAR 100 (181)
T ss_dssp ---------EECTTSSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEEEECCCSSCEEETTEEEEEEE
T ss_pred ---------cCCCCCceEEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEEEEeccccceeeCCcEEEEEE
Confidence 23344444556788999999999999999999999999998999999999999999999999999999999
Q ss_pred CCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEcCCCCCCCHHHHHHHH
Q 014800 278 LSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLE 357 (418)
Q Consensus 278 I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~~~l~~~~~~~L~ 357 (418)
|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++ ||++|+++|+
T Consensus 101 Isl~eAllG~~i~v~tldG~~~~i~i~~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~--ls~~q~~~l~ 176 (181)
T 3agx_A 101 ISLREALCGCTVNVPTLDGRTIPVVFKDV--IRPGMRRKVPGEGLPLPKTPEKRGDLIIEFEVIFPER--IPQTSRTVLE 176 (181)
T ss_dssp EEHHHHHHCEEEEEECTTSCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTSBCCEEEEEEEECCSC--CCHHHHHHHH
T ss_pred cCHHHHhCCCEEEeECCCCCEEEEECCCc--cCCCcEEEECCcCCCcCCCCCCcCCEEEEEEEECCCC--CCHHHHHHHH
Confidence 99999999999999999999899999887 8999999999999998755567899999999999999 9999999999
Q ss_pred hhCCC
Q 014800 358 SVLPP 362 (418)
Q Consensus 358 ~~lp~ 362 (418)
++||+
T Consensus 177 ~~~~~ 181 (181)
T 3agx_A 177 QVLPI 181 (181)
T ss_dssp HHSCC
T ss_pred HhccC
Confidence 99963
No 4
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=1.9e-44 Score=327.59 Aligned_cols=177 Identities=35% Similarity=0.625 Sum_probs=163.8
Q ss_pred CceEEEeccchhhhhhccceeeeeeeeeeecCCCCCCCCccCCcccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCc
Q 014800 118 GEDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGA 197 (418)
Q Consensus 118 ~~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 197 (418)
+.|+.++|.+||+|+|+|+++++.+++.+.|+.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~----------------------------------------------- 35 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEH----------------------------------------------- 35 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETT-----------------------------------------------
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCC-----------------------------------------------
Confidence 679999999999999999999999999888731
Q ss_pred eeEEecCCCCCccCCceEEEeeEEEEEEecCCCcCCCeeeecCCcCC-CCCCCCccEEEEEEEecCCCccccccceeeec
Q 014800 198 GEVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE-APDTITGDIVFILQLKEHPKFKRKFDDLYVDH 276 (418)
Q Consensus 198 G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~G~G~~-~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~~ 276 (418)
+++.+.+.++|+||||+++|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||++++
T Consensus 36 ----------------g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i~~~~h~~F~R~G~DL~~~~ 99 (180)
T 2q2g_A 36 ----------------KVRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLIIQTKTHPRFTRDDCHLIMKV 99 (180)
T ss_dssp ----------------EEEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEEEECCCSSCEEETTEEEEEE
T ss_pred ----------------ceEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEEEEEecccEEEcCCEEEEEE
Confidence 2345678899999999999999999999999 68899999999999999999999999999999
Q ss_pred cCCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEcCCCCCCCHHHHHHH
Q 014800 277 TLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTL 356 (418)
Q Consensus 277 ~I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~~~l~~~~~~~L 356 (418)
+|||+|||+|+++.|+||||+.+.|++|++ ++||++++|+|+|||..++++.+|||||+|+|+||++ ||++|+++|
T Consensus 100 ~Isl~eAllG~~i~v~tldG~~v~i~ip~~--t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~V~~P~~--Ls~~q~~~l 175 (180)
T 2q2g_A 100 TIPLVRALTGFTCPVTTLDNRNLQIPIKEI--VNPKTRKIVPNEGMPIKNQPGQKGDLILEFDICFPKS--LTPEQKKLI 175 (180)
T ss_dssp EEEHHHHHHCEEEEEECTTCCEEEEEECSC--CCTTCEEEETTCSCBCSSSTTCBCCEEEEEEEECCSC--CCHHHHHHH
T ss_pred EcCHHHHhCCCEEEeeCCCCCEEEEECCCc--cCCCEEEEECCcCCCcCCCCCCcCCEEEEEEEECCCC--CCHHHHHHH
Confidence 999999999999999999999899999987 8999999999999998755567899999999999999 999999999
Q ss_pred HhhCC
Q 014800 357 ESVLP 361 (418)
Q Consensus 357 ~~~lp 361 (418)
+++||
T Consensus 176 ~~~~p 180 (180)
T 2q2g_A 176 KEALD 180 (180)
T ss_dssp HHHC-
T ss_pred HHhcC
Confidence 99985
No 5
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=5.5e-41 Score=302.11 Aligned_cols=169 Identities=32% Similarity=0.558 Sum_probs=153.0
Q ss_pred ceEEEeccchhhhhhccceeeeeeeeeeecCCCCCCCCccCCcccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCce
Q 014800 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAG 198 (418)
Q Consensus 119 ~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 198 (418)
.|+.+.|.+||+|+|+|+++++.+++.. + .
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~----~------------------~---------------------------- 30 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG----P------------------H---------------------------- 30 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE----T------------------T----------------------------
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec----C------------------C----------------------------
Confidence 3789999999999999999999987641 0 0
Q ss_pred eEEecCCCCCccCCceEEEeeEEEEEEecCCCcCCCeeeecCCcCC-CCCCCCccEEEEEEEecCCCccccccceeeecc
Q 014800 199 EVISERDKCPQCKANKVTQEKKVLEVHVEKGMQHGQKIAFEGQADE-APDTITGDIVFILQLKEHPKFKRKFDDLYVDHT 277 (418)
Q Consensus 199 ~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~G~G~~-~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~~~ 277 (418)
|.+ +.+.++|+||||+.+|++|+|+|+|++ .+++.+|||||+|++++|+.|+|+|+||+++++
T Consensus 31 ---------------G~~-~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v~~h~~F~R~G~DL~~~~~ 94 (170)
T 1c3g_A 31 ---------------GAS-EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQEKSHPNFKRDGDDLIYTLP 94 (170)
T ss_dssp ---------------TEE-EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEECCCSSEEEETTEEEEEEC
T ss_pred ---------------CcE-EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEEccCCccEEeCCcEeEEEE
Confidence 122 568899999999999999999999995 588899999999999999999999999999999
Q ss_pred CCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEcCCCCCCCHHHHHHHH
Q 014800 278 LSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLE 357 (418)
Q Consensus 278 I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~~~l~~~~~~~L~ 357 (418)
|||+|||+|+++.|+||||+.+.|++|++ +++|++++|+|+|||..++++.+|||||+|+|+||++ ||++|+++|+
T Consensus 95 Isl~eAllG~~~~v~tldG~~~~i~i~~~--t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~~P~~--Ls~~q~~~l~ 170 (170)
T 1c3g_A 95 LSFKESLLGFSKTIQTIDGRTLPLSRVQP--VQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVDYPIS--LNDAQKRAID 170 (170)
T ss_dssp CBHHHHHHCEEEEEECSSSCEEEEEESSC--CCTTCEEECTTCSCBCSSCTTSBCCEEEEECCBCCSS--CCTTHHHHTC
T ss_pred cCHHHHhCCCeEEeeCCCCCEEEEECCCc--cCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEECCCC--CCHHHHHhhC
Confidence 99999999999999999999899999987 7999999999999998755567899999999999999 9999998763
No 6
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.96 E-value=3.6e-29 Score=212.56 Aligned_cols=120 Identities=35% Similarity=0.548 Sum_probs=103.4
Q ss_pred CccccccceeeeccCCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEcC
Q 014800 264 KFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFP 343 (418)
Q Consensus 264 ~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P 343 (418)
.|+|+|+||+++++|||++||+|+++.|+||||+.+.|+||||+++++|++++|+|+|||..+++ .+|||||+|+|+||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 49999999999999999999999999999999998999999999999999999999999987544 78999999999999
Q ss_pred CCCCCCHHHHHHHHhhCCCCCCCCCCCCCCCcceeeeeccCCc
Q 014800 344 ECGILSPDQCRTLESVLPPRPGKNLSDMELDDCEEVTMHDVNI 386 (418)
Q Consensus 344 ~~~~l~~~~~~~L~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (418)
+++||+++|+++|+++++.++. .. ....+++|++.+.++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~~~~~-~~-~~~~~~~ee~~~~~~~~ 120 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILPPRIV-PA-IPKKATVDECVLADFDP 120 (121)
T ss_dssp CTTCSCHHHHHHHHHHSCCCCC-CC-CCTTSCEEEEECEECCC
T ss_pred CCCCCCHHHHHHHHHHcccccc-cC-CCCCCCceEEEeeccCC
Confidence 9999999999999999987653 11 13347788888888875
No 7
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.92 E-value=1.8e-25 Score=186.20 Aligned_cols=95 Identities=20% Similarity=0.305 Sum_probs=88.1
Q ss_pred ecCCCccccccceeeeccCCHHHHhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEE
Q 014800 260 KEHPKFKRKFDDLYVDHTLSLTEALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFN 339 (418)
Q Consensus 260 ~~h~~f~R~g~dL~~~~~I~l~eAl~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~ 339 (418)
++|+.|+|+|+||+++++|||.|||+|+++.|+||||+ +.|+||+| +++|++++|+|+|||.. . .+|||||+|+
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g--~~~G~~~rl~G~G~p~~--~-~~GDL~v~~~ 75 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPG--SQAGQRLRIKGKGLVSK--T-HTGDLFAVIK 75 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTT--CCTTCEEEETTCSCBCS--S-CBCCEEEEEE
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCC--cCcCeEEEECCccCCCC--C-CCcCEEEEEE
Confidence 68999999999999999999999999999999999995 89999999 89999999999999973 2 6999999999
Q ss_pred EEcCCCCCCCHHHHHHHHhhCCC
Q 014800 340 VEFPECGILSPDQCRTLESVLPP 362 (418)
Q Consensus 340 V~~P~~~~l~~~~~~~L~~~lp~ 362 (418)
|+||++ |+++|+++|++++..
T Consensus 76 V~~P~~--Ls~~q~~~l~~l~~~ 96 (109)
T 3i38_A 76 IVMPTK--PDEKARELWQQLAAA 96 (109)
T ss_dssp ECCCSS--CCHHHHHHHHHHHHH
T ss_pred EECCCC--CCHHHHHHHHHHHhh
Confidence 999999 999999999999753
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.91 E-value=1.8e-25 Score=184.54 Aligned_cols=90 Identities=52% Similarity=0.881 Sum_probs=66.5
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---hhhHhhhhhhhhcCCccccccccccCchhhccCCCCCC
Q 014800 11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEGMGGAG 86 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-~---~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~~~~~~~ 86 (418)
..+||+||||+++||.+|||+|||+||++||||++++ + ++|++|++||+||+||.+|+.||++|+.++..+..+++
T Consensus 2 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~~~~~~ 81 (103)
T 1bq0_A 2 KQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQGGMGGG 81 (103)
T ss_dssp CCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSCC----
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcccCcCCC
Confidence 4699999999999999999999999999999999974 2 79999999999999999999999999998875421111
Q ss_pred ---CCCCCCCccccccC
Q 014800 87 ---AAHNPFDIFESFFG 100 (418)
Q Consensus 87 ---~~~~~~diF~~~Fg 100 (418)
++.++.++|++||+
T Consensus 82 ~~~~~~~~~~~f~~~f~ 98 (103)
T 1bq0_A 82 GFGGGADFSDIFGDVFG 98 (103)
T ss_dssp -----------------
T ss_pred CCCCCCCHHHHHHHHHH
Confidence 12245677887776
No 9
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.89 E-value=3.8e-24 Score=165.52 Aligned_cols=70 Identities=59% Similarity=0.917 Sum_probs=63.2
Q ss_pred CCCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-hhhHhhhhhhhhcCCccccccccccCch
Q 014800 7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-EKFKELGQAYEVLSDPEKRDIYDQYGED 76 (418)
Q Consensus 7 ~~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-~kFkei~~AYevLsD~~kR~~YD~~G~~ 76 (418)
.|+...+||+||||+++||.+|||+|||+|+++||||++++. ++|++|++||++|+||.+|+.||++|++
T Consensus 3 ~m~~~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 3 AMVKETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp ---CCCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred cccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 478889999999999999999999999999999999999864 8999999999999999999999999863
No 10
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.89 E-value=5e-24 Score=172.33 Aligned_cols=75 Identities=59% Similarity=0.953 Sum_probs=69.7
Q ss_pred CCCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-hhhhHhhhhhhhhcCCccccccccccCchhhccC
Q 014800 7 RRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-PEKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG 81 (418)
Q Consensus 7 ~~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-~~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~~ 81 (418)
.|....+||+||||+++||.+|||+|||+|+++||||+++. .++|++|++||+||+||.+|+.||++|++++..+
T Consensus 3 ~m~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 3 AMVKETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp -CCSCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred ccccCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 57788999999999999999999999999999999999975 4899999999999999999999999999988753
No 11
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.88 E-value=8.2e-24 Score=165.35 Aligned_cols=70 Identities=53% Similarity=1.071 Sum_probs=65.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hhhHhhhhhhhhcCCccccccccccCchhhcc
Q 014800 11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE 80 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~---~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~ 80 (418)
..+||+||||+++||.+|||+|||+|+++||||+++++ ++|++|++||++|+||.+|+.||++|.+++.+
T Consensus 2 ~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 2 GKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 46999999999999999999999999999999999754 89999999999999999999999999988763
No 12
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.88 E-value=1.8e-23 Score=167.58 Aligned_cols=72 Identities=51% Similarity=0.890 Sum_probs=67.4
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hhhHhhhhhhhhcCCccccccccccCchhhccC
Q 014800 10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG 81 (418)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~---~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~~ 81 (418)
...+||+||||+++||.+|||+|||+|+++||||+++++ ++|++|++||++|+||.+|+.||.+|+.++..+
T Consensus 5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 457999999999999999999999999999999999874 799999999999999999999999999888754
No 13
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=5.1e-23 Score=162.76 Aligned_cols=70 Identities=51% Similarity=0.885 Sum_probs=64.7
Q ss_pred CCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----hhhHhhhhhhhhcCCccccccccccCchhh
Q 014800 9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDAL 78 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-----~kFkei~~AYevLsD~~kR~~YD~~G~~~~ 78 (418)
....+||+||||+++||.+|||+|||+|+++||||++++. ++|++|++||++|+||.+|+.||++|+.++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 80 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPS 80 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 3457999999999999999999999999999999999863 699999999999999999999999997654
No 14
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=5.4e-23 Score=161.08 Aligned_cols=69 Identities=57% Similarity=0.994 Sum_probs=64.3
Q ss_pred CCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hhhHhhhhhhhhcCCccccccccccCchh
Q 014800 9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGEDA 77 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~---~kFkei~~AYevLsD~~kR~~YD~~G~~~ 77 (418)
....+||+||||+++||.+|||+|||+|+++||||+++++ ++|++|++||++|+||.+|+.||++|+.+
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~ 75 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGP 75 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCHHHHHHHHHcCccc
Confidence 3567999999999999999999999999999999999764 89999999999999999999999999754
No 15
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.86 E-value=6.4e-23 Score=161.03 Aligned_cols=68 Identities=53% Similarity=0.893 Sum_probs=63.3
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---hhhHhhhhhhhhcCCccccccccccCchh
Q 014800 10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDA 77 (418)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-~---~kFkei~~AYevLsD~~kR~~YD~~G~~~ 77 (418)
...+||+||||+++||.+|||+|||+|+++||||++++ + ++|++|++||++|+||.+|+.||++|..+
T Consensus 5 ~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 76 (79)
T 2dn9_A 5 SSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGP 76 (79)
T ss_dssp CCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCC
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcC
Confidence 46799999999999999999999999999999999974 2 79999999999999999999999998754
No 16
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=1e-22 Score=164.59 Aligned_cols=71 Identities=51% Similarity=0.849 Sum_probs=65.7
Q ss_pred CCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----hhhHhhhhhhhhcCCccccccccccCchhhcc
Q 014800 10 NNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE 80 (418)
Q Consensus 10 ~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-----~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~ 80 (418)
...+||+||||+++||.+|||+|||+|+++||||++++. ++|++|++||++|+||.+|+.||++|..++..
T Consensus 7 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 7 GMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 456999999999999999999999999999999999753 69999999999999999999999999877764
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=1.1e-22 Score=163.02 Aligned_cols=68 Identities=46% Similarity=0.830 Sum_probs=63.9
Q ss_pred CCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hhhHhhhhhhhhcCCccccccccccCch
Q 014800 9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDIYDQYGED 76 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~---~kFkei~~AYevLsD~~kR~~YD~~G~~ 76 (418)
....+||+||||+++||.+|||+|||+|+++||||+++++ ++|++|++||++|+||.+|+.||++|+.
T Consensus 14 ~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 14 ALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp SSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred cCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 4577999999999999999999999999999999999754 8999999999999999999999999874
No 18
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=3.4e-22 Score=163.72 Aligned_cols=72 Identities=33% Similarity=0.624 Sum_probs=64.4
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hhhhHhhhhhhhhcCCcccccccccc--Cchhhc
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQY--GEDALK 79 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~----~~kFkei~~AYevLsD~~kR~~YD~~--G~~~~~ 79 (418)
.....+||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++ +.+.+.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l~~~e~~~ 90 (99)
T 2yua_A 13 SYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSATLRRKYDRGLLSDEDLR 90 (99)
T ss_dssp SSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSHHHHHHHHHTCCCHHHHH
T ss_pred CCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcccccccc
Confidence 4567899999999999999999999999999999999974 27999999999999999999999984 445554
No 19
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.85 E-value=1.1e-22 Score=166.53 Aligned_cols=69 Identities=57% Similarity=0.973 Sum_probs=62.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----hhhHhhhhhhhhcCCccccccccccCchhhcc
Q 014800 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKE 80 (418)
Q Consensus 12 ~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-----~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~ 80 (418)
++||+||||+++||.+|||+|||+||++||||++++. ++|++|++||++|+||.+|+.||++|.+++..
T Consensus 2 ~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 2 ASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 5899999999999999999999999999999999863 69999999999999999999999999877753
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=1.6e-22 Score=169.30 Aligned_cols=72 Identities=26% Similarity=0.578 Sum_probs=66.4
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----hhhhHhhhhhhhhcCCccccccccccCchhhc
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD----PEKFKELGQAYEVLSDPEKRDIYDQYGEDALK 79 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~----~~kFkei~~AYevLsD~~kR~~YD~~G~~~~~ 79 (418)
+....+||+||||+++||.+|||+|||+||++||||++++ .++|++|++||+||+||.+|+.||++|..++.
T Consensus 16 ~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 16 SEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred ccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 4567899999999999999999999999999999999984 28999999999999999999999999987654
No 21
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.84 E-value=5.5e-22 Score=165.26 Aligned_cols=72 Identities=49% Similarity=0.862 Sum_probs=66.9
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---hhhHhhhhhhhhcCCccccccccccCchhhc
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALK 79 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-~---~kFkei~~AYevLsD~~kR~~YD~~G~~~~~ 79 (418)
.....+||+||||+++||.+|||+|||+||++||||++++ + ++|++|++||+||+||.+|+.||++|..++.
T Consensus 13 ~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 13 STSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp TSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 3567899999999999999999999999999999999985 2 7999999999999999999999999988765
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.83 E-value=1.3e-21 Score=158.75 Aligned_cols=68 Identities=34% Similarity=0.597 Sum_probs=62.3
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------h---hhhHhhhhhhhhcCCccccccccccCc
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-------P---EKFKELGQAYEVLSDPEKRDIYDQYGE 75 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-------~---~kFkei~~AYevLsD~~kR~~YD~~G~ 75 (418)
+....+||+||||+++||.+|||+|||+||++||||+++. . ++|++|++||+||+||.+|+.||.+..
T Consensus 12 ~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 12 QTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred cCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 4567899999999999999999999999999999999863 1 799999999999999999999998653
No 23
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.82 E-value=9.5e-22 Score=164.62 Aligned_cols=65 Identities=34% Similarity=0.558 Sum_probs=62.3
Q ss_pred CcccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhhcCCccccccccccCc
Q 014800 11 NTKYYEILGVSKSATE--DELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGE 75 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As~--~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYevLsD~~kR~~YD~~G~ 75 (418)
..+||+||||+++|+. +|||+|||+||++||||++++.++|++|++||+||+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4689999999999999 9999999999999999999998999999999999999999999999874
No 24
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=4e-21 Score=158.75 Aligned_cols=101 Identities=24% Similarity=0.566 Sum_probs=89.0
Q ss_pred ceEEEeccchhhhhhccceeeeeeeeeeecCCCCCCCCccCC-cccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCc
Q 014800 119 EDVVHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGA 197 (418)
Q Consensus 119 ~di~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~ 197 (418)
.++.++|.|||+|+|+|++++|.+.+.+.|+.|+|+|.+.++ ..+|+.|+|+|.+...+ |+ ++ ++.+|+.|+|+
T Consensus 2 ~~~~~~l~vslee~~~G~~~~i~~~~~~~C~~C~G~G~~~g~~~~~C~~C~G~G~~~~~~--G~--~~-~~~~C~~C~G~ 76 (104)
T 2ctt_A 2 SSGSSGMELTFNQAAKGVNKEFTVNIMDTCERCNGKGNEPGTKVQHCHYCGGSGMETINT--GP--FV-MRSTCRRCGGR 76 (104)
T ss_dssp CCCCCCCCCCCSSCCSSSCTTCCSSCCEECSSSSSSSSCTTCCCEECSSSSSSCEEEEEE--TT--EE-EEEECSSSSSS
T ss_pred CceEEEEEEEHHHHcCCCEEEEEeeeeeECCCCcCCccCCCCCCccCCCCCCCEEEEEEe--CC--EE-EEEECCcCCCc
Confidence 467889999999999999999999999999999999998876 47899999999876543 54 33 46899999999
Q ss_pred eeEEecCCCCCccCCceEEEeeEEEEEEe
Q 014800 198 GEVISERDKCPQCKANKVTQEKKVLEVHV 226 (418)
Q Consensus 198 G~~~~~~~~C~~C~G~g~~~~~~~l~V~I 226 (418)
|+++. ++|+.|+|++++.+.+.|+|+|
T Consensus 77 G~~i~--~~C~~C~G~G~v~~~k~l~V~~ 103 (104)
T 2ctt_A 77 GSIII--SPCVVCRGAGQAKQKKRSGPSS 103 (104)
T ss_dssp SEECS--SCCSSSSSCSEECCCCSSCCSC
T ss_pred ceECC--CcCCCCCCeeEEEEEEEEEEEc
Confidence 99986 9999999999999999888875
No 25
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.81 E-value=4.2e-21 Score=150.59 Aligned_cols=66 Identities=20% Similarity=0.378 Sum_probs=60.8
Q ss_pred CcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhhcCCccccccccccCchh
Q 014800 11 NTKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGEDA 77 (418)
Q Consensus 11 ~~~~Y~iLgv~~~--As~~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYevLsD~~kR~~YD~~G~~~ 77 (418)
..++|+||||+++ ||.+|||+|||+||++||||++++.++|++|++||++|+|+.+|.. |.||..+
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 3589999999999 9999999999999999999999999999999999999999999987 5577643
No 26
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.81 E-value=4.2e-21 Score=177.30 Aligned_cols=70 Identities=44% Similarity=0.860 Sum_probs=65.1
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-h---hhhHhhhhhhhhcCCccccccccccCchhhccC
Q 014800 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-P---EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG 81 (418)
Q Consensus 12 ~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-~---~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~~ 81 (418)
.|||+||||+++||.+|||+|||+||++||||++++ + ++|++|++||++|+||.+|+.||+||+.++...
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 489999999999999999999999999999999964 2 799999999999999999999999999887644
No 27
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.80 E-value=2.5e-21 Score=172.97 Aligned_cols=66 Identities=33% Similarity=0.545 Sum_probs=59.9
Q ss_pred CCcccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhhcCCccccccccccCc
Q 014800 10 NNTKYYEILGVSKSAT--EDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGE 75 (418)
Q Consensus 10 ~~~~~Y~iLgv~~~As--~~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYevLsD~~kR~~YD~~G~ 75 (418)
...+||+||||+++|| .+|||+|||+||++||||+++++++|++|++||+||+||.+|+.||+||.
T Consensus 9 ~~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 9 ESLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 3468999999999999 69999999999999999999999999999999999999999999999985
No 28
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.80 E-value=4.4e-21 Score=159.83 Aligned_cols=68 Identities=35% Similarity=0.618 Sum_probs=63.4
Q ss_pred CCCCcccccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------hhhhHhhhhhhhhcCCccccccccccCc
Q 014800 8 RSNNTKYYEILGVSKSA-TEDELKKAYRKAAMKNHPDKGGD-------PEKFKELGQAYEVLSDPEKRDIYDQYGE 75 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~A-s~~eIkkAYrkla~k~HPDkn~~-------~~kFkei~~AYevLsD~~kR~~YD~~G~ 75 (418)
+....+||+||||+++| |.+|||+|||+||++||||++++ .++|++|++||++|+||.+|+.||+++.
T Consensus 11 ~~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 11 YCGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred HcCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 45678999999999999 99999999999999999999986 2799999999999999999999999875
No 29
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.79 E-value=2.2e-20 Score=150.25 Aligned_cols=61 Identities=38% Similarity=0.524 Sum_probs=56.6
Q ss_pred CCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh---hhhHhhhhhhhhcCCcccccc
Q 014800 9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP---EKFKELGQAYEVLSDPEKRDI 69 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~---~kFkei~~AYevLsD~~kR~~ 69 (418)
....+||+||||+++||.+|||+|||+||++||||+++++ ++|++|++||++|+|+.+|+.
T Consensus 24 ~~~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 24 RNSKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp HTCSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred hcCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCcccccC
Confidence 3568999999999999999999999999999999999654 899999999999999999974
No 30
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.77 E-value=8.4e-20 Score=161.53 Aligned_cols=67 Identities=34% Similarity=0.572 Sum_probs=61.6
Q ss_pred CCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----------hhhHhhhhhhhhcCCccccccccccCc
Q 014800 9 SNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----------EKFKELGQAYEVLSDPEKRDIYDQYGE 75 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~----------~kFkei~~AYevLsD~~kR~~YD~~G~ 75 (418)
....|||+||||+++||.+|||+|||+||++||||++++. ++|++|++||+||+||.+|+.||.++.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 3467999999999999999999999999999999998643 799999999999999999999998664
No 31
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.75 E-value=3.9e-19 Score=136.47 Aligned_cols=60 Identities=30% Similarity=0.482 Sum_probs=55.6
Q ss_pred CCCcccccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhhcCCccccc
Q 014800 9 SNNTKYYEILGVSK-SATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRD 68 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~-~As~~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYevLsD~~kR~ 68 (418)
+...++|+||||++ +||.+|||+|||+||++||||+++++++|++|++||++|+|+..|+
T Consensus 11 m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~~~rk 71 (71)
T 2guz_A 11 MNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKRGISK 71 (71)
T ss_dssp CCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHHCCCC
T ss_pred CCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhhhhcC
Confidence 34579999999999 7999999999999999999999988899999999999999987764
No 32
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=2.8e-19 Score=142.81 Aligned_cols=63 Identities=27% Similarity=0.249 Sum_probs=56.6
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-----hhhHhhhhhhhhcCCccccccc
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-----EKFKELGQAYEVLSDPEKRDIY 70 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-----~kFkei~~AYevLsD~~kR~~Y 70 (418)
.....++|+||||+++||.+|||+|||+||++||||+|++. ++|++|++||++|+|...|..+
T Consensus 12 ~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~~~ 79 (88)
T 1iur_A 12 GSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLDQN 79 (88)
T ss_dssp SSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCSSS
T ss_pred CccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccccc
Confidence 34567999999999999999999999999999999999862 7999999999999998887433
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.71 E-value=1.3e-18 Score=143.75 Aligned_cols=58 Identities=17% Similarity=0.275 Sum_probs=51.6
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----------hhhhHhhhhhhhhcCCccc
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGD-----------PEKFKELGQAYEVLSDPEK 66 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~-----------~~kFkei~~AYevLsD~~k 66 (418)
...+.|||+|||++. ||.+|||+|||+||++||||||++ .++|++|++||+||||+..
T Consensus 37 l~~~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~~ 105 (106)
T 3ag7_A 37 LWSGSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLGP 105 (106)
T ss_dssp SCTTSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTCC
T ss_pred hcccCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCccc
Confidence 445689999999996 999999999999999999999852 2699999999999999863
No 34
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.70 E-value=1.5e-18 Score=139.21 Aligned_cols=52 Identities=29% Similarity=0.478 Sum_probs=48.3
Q ss_pred cccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------hhhHhhhhhhhhcCC
Q 014800 12 TKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSD 63 (418)
Q Consensus 12 ~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-------~kFkei~~AYevLsD 63 (418)
.++|++|||+++||.+|||+||||||++||||||++. ++|++|++|||||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 5899999999999999999999999999999999752 589999999999975
No 35
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.70 E-value=1.1e-18 Score=190.65 Aligned_cols=74 Identities=41% Similarity=0.785 Sum_probs=40.9
Q ss_pred CCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh----hhhHhhhhhhhhcCCccccccccccCchhhccC
Q 014800 8 RSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP----EKFKELGQAYEVLSDPEKRDIYDQYGEDALKEG 81 (418)
Q Consensus 8 ~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~----~kFkei~~AYevLsD~~kR~~YD~~G~~~~~~~ 81 (418)
...+.|||++|||+++||.+|||+|||+||++||||+|++. ++|++|++||++|+||.+|+.||+||++++..+
T Consensus 17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 45678999999999999999999999999999999999642 799999999999999999999999999888754
No 36
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.70 E-value=2.9e-18 Score=154.04 Aligned_cols=60 Identities=28% Similarity=0.534 Sum_probs=56.2
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------hhhHhhhhhhhhcCCccccccc
Q 014800 11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIY 70 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-------~kFkei~~AYevLsD~~kR~~Y 70 (418)
..+||++|||+++||.+|||+|||+||++|||||+++. ++|++|++||+||+|+.+|+.|
T Consensus 116 ~~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 116 GETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp TCCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 46999999999999999999999999999999998642 5999999999999999999988
No 37
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.70 E-value=2.7e-18 Score=154.48 Aligned_cols=63 Identities=24% Similarity=0.445 Sum_probs=58.0
Q ss_pred CcccccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCh---------hhhHhhhhhhhhcCCcccccccccc
Q 014800 11 NTKYYEILGVSKSAT--EDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQY 73 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As--~~eIkkAYrkla~k~HPDkn~~~---------~kFkei~~AYevLsD~~kR~~YD~~ 73 (418)
..|||+||||+++|+ .++||+|||+|+++||||++++. ++|+.|++||+||+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 569999999999998 99999999999999999998743 5899999999999999999999973
No 38
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.69 E-value=2.8e-18 Score=153.88 Aligned_cols=62 Identities=21% Similarity=0.352 Sum_probs=58.1
Q ss_pred ccccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCh---------hhhHhhhhhhhhcCCccccccccccC
Q 014800 13 KYYEILGVSKSA--TEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQYG 74 (418)
Q Consensus 13 ~~Y~iLgv~~~A--s~~eIkkAYrkla~k~HPDkn~~~---------~kFkei~~AYevLsD~~kR~~YD~~G 74 (418)
|||++|||+++| |.++||+|||+|+++||||++++. ++|+.|++||+||+||.+|+.||..-
T Consensus 2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 899999999999 999999999999999999998753 48999999999999999999999863
No 39
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.68 E-value=5.7e-18 Score=156.24 Aligned_cols=62 Identities=21% Similarity=0.391 Sum_probs=57.3
Q ss_pred CcccccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCh---------hhhHhhhhhhhhcCCccccccccc
Q 014800 11 NTKYYEILGVSKS--ATEDELKKAYRKAAMKNHPDKGGDP---------EKFKELGQAYEVLSDPEKRDIYDQ 72 (418)
Q Consensus 11 ~~~~Y~iLgv~~~--As~~eIkkAYrkla~k~HPDkn~~~---------~kFkei~~AYevLsD~~kR~~YD~ 72 (418)
..|||++|||+++ ||.++||+|||+|+++||||++++. ++|++|++||+||+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 5699999999986 7999999999999999999998742 579999999999999999999995
No 40
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.67 E-value=1.7e-17 Score=150.03 Aligned_cols=64 Identities=30% Similarity=0.550 Sum_probs=58.4
Q ss_pred CCccccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCC-hhhhHhhhhhhhhcCCcccccccccc
Q 014800 10 NNTKYYEIL------GVSK-SATEDELKKAYRKAAMKNHPDKGGD-PEKFKELGQAYEVLSDPEKRDIYDQY 73 (418)
Q Consensus 10 ~~~~~Y~iL------gv~~-~As~~eIkkAYrkla~k~HPDkn~~-~~kFkei~~AYevLsD~~kR~~YD~~ 73 (418)
..+|||+|| |+++ +||.++||+|||+||++||||++++ .++|++|++||+||+||.+|+.||..
T Consensus 9 ~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp~~R~~Yd~~ 80 (181)
T 3uo3_A 9 FTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDPLRRSQYMLK 80 (181)
T ss_dssp CSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 456999999 4655 9999999999999999999999984 48999999999999999999999983
No 41
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=99.49 E-value=3.9e-14 Score=110.65 Aligned_cols=77 Identities=31% Similarity=0.775 Sum_probs=65.6
Q ss_pred cceeeeeeeeeeecCCCCCCCCccCC-cccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeEEecCCCCCccCCc
Q 014800 135 GTTKKLSLSRNILCPKCKGKGSKSGA-LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKAN 213 (418)
Q Consensus 135 G~~~~~~~~r~~~C~~C~G~G~~~~~-~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~ 213 (418)
|++++|.+++.+.|+.|+|+|..... ..+|+.|+|+|.++..+ |+++ ++.+|+.|+|+|+++. ++|+.|+|.
T Consensus 1 G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~----g~~~-~~~~C~~C~G~G~~~~--~~C~~C~G~ 73 (79)
T 1exk_A 1 GVTKEIRIPTLEECDVCHGSGAKPGTQPQTCPTCHGSGQVQMRQ----GFFA-VQQTCPHCQGRGTLIK--DPCNKCHGH 73 (79)
T ss_dssp CTTTSCCCCCEEECGGGTTTSBCSSSCCEECTTTTTSSEEEEEE----TTEE-EEEECTTTTTSSEECS--SBCGGGTTS
T ss_pred CcEEEEEcccceECCCCcccccCCCccCCCCCCCcCeEEEEEEc----CCCE-EeeECcCCCCccEECC--CcCCCCCCe
Confidence 67788999999999999999988765 36899999999977633 4554 6789999999999875 999999999
Q ss_pred eEEEe
Q 014800 214 KVTQE 218 (418)
Q Consensus 214 g~~~~ 218 (418)
+++.+
T Consensus 74 G~~~~ 78 (79)
T 1exk_A 74 GRVER 78 (79)
T ss_dssp SEEEC
T ss_pred EEEee
Confidence 98864
No 42
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.37 E-value=9e-13 Score=124.98 Aligned_cols=130 Identities=22% Similarity=0.346 Sum_probs=80.8
Q ss_pred hhhccceeeeeeeeeeecCCCCCCCCccC----------CcccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeE
Q 014800 131 DLYNGTTKKLSLSRNILCPKCKGKGSKSG----------ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV 200 (418)
Q Consensus 131 e~~~G~~~~~~~~r~~~C~~C~G~G~~~~----------~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~ 200 (418)
..|.|...+-.. ...|+.|+|+|.... ...+|+.|+|+|.++. ...+|+.|+|.|.+
T Consensus 42 ~~C~G~G~~~g~--~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~i~-----------~~~~C~~C~G~g~~ 108 (248)
T 1nlt_A 42 KECEGRGGKKGA--VKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCHGTGDIID-----------PKDRCKSCNGKKVE 108 (248)
T ss_dssp TTTTTCSBSTTT--CCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCSSSSSCCC-----------TTSBCSSSTTSCEE
T ss_pred CCCcCccCCCCC--CccCCCCCCCcEEEEEEecCceEEEEEEcCCCCCCcCEEec-----------cCCCCcccCCCceE
Confidence 456666654322 378999999996421 2357999999998651 13789999999876
Q ss_pred EecC----------------------CCCC-ccCCceEEEeeE-------------------------------------
Q 014800 201 ISER----------------------DKCP-QCKANKVTQEKK------------------------------------- 220 (418)
Q Consensus 201 ~~~~----------------------~~C~-~C~G~g~~~~~~------------------------------------- 220 (418)
...+ +.=+ .-.|.-++.-..
T Consensus 109 ~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG 188 (248)
T 1nlt_A 109 NERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSG 188 (248)
T ss_dssp EEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEEEEEEHHHHHHCBCCEEECSSS
T ss_pred eeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEEEEeCHHHHhcCCEEEEeCCCC
Confidence 4310 0000 001111111111
Q ss_pred -EEEEEecCC--CcCCCeeeecCCcCCCCCC-CCccEEEEEEEecCCC--cccccccee
Q 014800 221 -VLEVHVEKG--MQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPK--FKRKFDDLY 273 (418)
Q Consensus 221 -~l~V~Ip~G--~~~G~~i~~~G~G~~~~g~-~~GDliv~i~~~~h~~--f~R~g~dL~ 273 (418)
.++|+||+| +++|++++|+|+|.+..+. ..|||||+|+|.-+.. ++.+...|+
T Consensus 189 ~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL~V~~~V~~P~~~~Ls~~q~~~l 247 (248)
T 1nlt_A 189 DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKDPENHFTSEENLKKL 247 (248)
T ss_dssp CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCEEEEEEEECCC------------
T ss_pred CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCEEEEEEEECCCCCCCCHHHHHhh
Confidence 689999999 9999999999999986433 5799999999997776 666555443
No 43
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.13 E-value=2.1e-11 Score=121.59 Aligned_cols=62 Identities=47% Similarity=0.770 Sum_probs=53.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCh-------hhhHhhhhhhhhcCCccccccccc
Q 014800 11 NTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDP-------EKFKELGQAYEVLSDPEKRDIYDQ 72 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~-------~kFkei~~AYevLsD~~kR~~YD~ 72 (418)
..++|.+||+.+.++.++|+++|+++|+++|||+.+++ ++|++|++||++|+|++||+.||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 35899999999999999999999999999999998864 599999999999999999999997
No 44
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.05 E-value=9.3e-11 Score=87.63 Aligned_cols=51 Identities=22% Similarity=0.208 Sum_probs=47.4
Q ss_pred ccccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhhcCC
Q 014800 13 KYYEILGVSKS---ATEDELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSD 63 (418)
Q Consensus 13 ~~Y~iLgv~~~---As~~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYevLsD 63 (418)
.-|.||||+++ ||.++|++|||+|...+|||+++++-.+.+|++|+++|..
T Consensus 5 EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~ 58 (65)
T 2guz_B 5 ESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58 (65)
T ss_dssp HHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence 45889999999 9999999999999999999999998889999999999963
No 45
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=98.81 E-value=3.8e-09 Score=87.37 Aligned_cols=53 Identities=23% Similarity=0.374 Sum_probs=45.4
Q ss_pred EEEEecCCCcCCCeeeecCCcCCCCCCCCccEEEEEEEecCCCccccccceeee
Q 014800 222 LEVHVEKGMQHGQKIAFEGQADEAPDTITGDIVFILQLKEHPKFKRKFDDLYVD 275 (418)
Q Consensus 222 l~V~Ip~G~~~G~~i~~~G~G~~~~g~~~GDliv~i~~~~h~~f~R~g~dL~~~ 275 (418)
++|+||+|+++|++++++|+|.+..+ ..|||||+|+|.-+..++.+..+|+..
T Consensus 40 ~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~~V~~P~~Ls~~q~~~l~~ 92 (109)
T 3i38_A 40 ILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVIKIVMPTKPDEKARELWQQ 92 (109)
T ss_dssp EEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEEEECCCSSCCHHHHHHHHH
T ss_pred EEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEEEEECCCCCCHHHHHHHHH
Confidence 67999999999999999999998754 789999999999888777666665544
No 46
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=98.66 E-value=2.4e-08 Score=84.12 Aligned_cols=55 Identities=16% Similarity=0.223 Sum_probs=42.8
Q ss_pred EEEEEecCC--CcCCCeeeecCCcCCCCCC-CCccEEEEEEEecCCC--ccccccceeee
Q 014800 221 VLEVHVEKG--MQHGQKIAFEGQADEAPDT-ITGDIVFILQLKEHPK--FKRKFDDLYVD 275 (418)
Q Consensus 221 ~l~V~Ip~G--~~~G~~i~~~G~G~~~~g~-~~GDliv~i~~~~h~~--f~R~g~dL~~~ 275 (418)
.+.|+||+| +++|++++++|+|.+..+. ..|||||+++|.-+.. ++.+..+|+..
T Consensus 35 ~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~V~~~V~~P~~~~ls~~q~~~l~~ 94 (121)
T 1xao_A 35 WLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLIIKFTIKFPENHFTSEENLKKLEE 94 (121)
T ss_dssp EEEEEECTTSCCCTTCEEEETTCSCC------CCCEEEEEEEECCCTTCSCHHHHHHHHH
T ss_pred EEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEEEEEEEECCCCCCCCHHHHHHHHH
Confidence 467899999 9999999999999986443 6899999999998776 77666555444
No 47
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=98.53 E-value=1.5e-07 Score=83.84 Aligned_cols=70 Identities=19% Similarity=0.213 Sum_probs=59.2
Q ss_pred ceeeeccCCHHHHhcCcEEEEeec----CC----cEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEc
Q 014800 271 DLYVDHTLSLTEALCGFQFALTHL----DG----RQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEF 342 (418)
Q Consensus 271 dL~~~~~I~l~eAl~G~~~~i~~l----dG----~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~ 342 (418)
|+.+.+.|||.||+.|.++.|..- +| +.+.|+|||| +..|+.++++|+|-+.. ..+..|||||.++|.-
T Consensus 2 d~~~~l~islee~~~G~~k~i~~~~~~~~G~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~~~-~gg~~GDl~v~i~v~~ 78 (170)
T 1c3g_A 2 TVQVNLPVSLEDLFVGKKKSFKIGRKGPHGASEKTQIDIQLKPG--WKAGTKITYKNQGDYNP-QTGRRKTLQFVIQEKS 78 (170)
T ss_dssp EEEEEEEECHHHHHHTCEEEEEEEEEETTTEEEEEEEEEECCTT--CCTTCEEEESSCSSBCS-SSSCBCEEEEEEEECC
T ss_pred CEEEEEEeEHHHhhCCcEEEEEEEEecCCCcEEeEEEEEEeCCC--ccCCCEEEEeccccCCC-CCCccccEEEEEEEcc
Confidence 789999999999999998887543 23 7899999999 89999999999998654 3456899999999864
Q ss_pred C
Q 014800 343 P 343 (418)
Q Consensus 343 P 343 (418)
.
T Consensus 79 h 79 (170)
T 1c3g_A 79 H 79 (170)
T ss_dssp C
T ss_pred C
Confidence 3
No 48
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=98.51 E-value=1.9e-07 Score=83.95 Aligned_cols=71 Identities=17% Similarity=0.153 Sum_probs=59.4
Q ss_pred ccceeeeccCCHHHHhcCcEEEEeec-----------CCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEE
Q 014800 269 FDDLYVDHTLSLTEALCGFQFALTHL-----------DGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQ 337 (418)
Q Consensus 269 g~dL~~~~~I~l~eAl~G~~~~i~~l-----------dG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~ 337 (418)
+.|+.+.+.|||.||+.|.++.|..- ..+.+.|.|||| ++.|+.++++|+|-+.. ..+..|||||.
T Consensus 3 g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g~~~~~~~l~V~Ip~G--~~~G~~ir~~g~G~~g~-~gg~~GDl~v~ 79 (180)
T 2q2g_A 3 PRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHKVRNEENIVEVEIKPG--WKDGTKLTYSGEGDQES-PGTSPGDLVLI 79 (180)
T ss_dssp -CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTEEEEEEEEEEEEECTT--CCTTCEEEETTCSCCSS-TTSCCCEEEEE
T ss_pred CCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCceEEeeEEEEEEECCC--CcCCcEEEEeeccCCCC-CCCccccEEEE
Confidence 67999999999999999998777542 246799999999 89999999999998732 24568999999
Q ss_pred EEEEc
Q 014800 338 FNVEF 342 (418)
Q Consensus 338 ~~V~~ 342 (418)
++|.=
T Consensus 80 i~~~~ 84 (180)
T 2q2g_A 80 IQTKT 84 (180)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 99863
No 49
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.42 E-value=2.4e-07 Score=91.03 Aligned_cols=73 Identities=19% Similarity=0.244 Sum_probs=55.8
Q ss_pred ccccceeeeccCCHHHHhcCcEEEEeec------C-------CcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCC
Q 014800 267 RKFDDLYVDHTLSLTEALCGFQFALTHL------D-------GRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGR 333 (418)
Q Consensus 267 R~g~dL~~~~~I~l~eAl~G~~~~i~~l------d-------G~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~Gd 333 (418)
++|.||.+.+.|+|.||+.|.+..|..- . .++|.|+|||| +++|++++++|+|.|.. +.+..||
T Consensus 138 ~~g~Dl~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~G--v~~G~~Irl~G~G~~g~-~gg~~GD 214 (329)
T 3lz8_A 138 ARGHDLEIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAG--VVDGQRIRLKGQGTPGE-NGGPNGD 214 (329)
T ss_dssp CCCCCEEEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTT--CCTTCEEEESSCSCCC----CCCCC
T ss_pred CCCCCEEEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCC--CCCCCEEEEcccccCCC-CCCCCCc
Confidence 4677888888888888888876555322 2 24688999999 89999999999999865 3456899
Q ss_pred eEEEEEEEc
Q 014800 334 LYIQFNVEF 342 (418)
Q Consensus 334 L~v~~~V~~ 342 (418)
|||+|+|.=
T Consensus 215 L~v~I~v~~ 223 (329)
T 3lz8_A 215 LWLVIHIAP 223 (329)
T ss_dssp EEEEECCCC
T ss_pred EEEEEEEec
Confidence 999988763
No 50
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=98.41 E-value=6.2e-07 Score=80.73 Aligned_cols=72 Identities=19% Similarity=0.184 Sum_probs=57.4
Q ss_pred ccceeeeccCCHHHHhcCcEEEEeec------CC-------cEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeE
Q 014800 269 FDDLYVDHTLSLTEALCGFQFALTHL------DG-------RQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLY 335 (418)
Q Consensus 269 g~dL~~~~~I~l~eAl~G~~~~i~~l------dG-------~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~ 335 (418)
+.|+.+.+.|||.||+.|.++.|.-- .| +.+.|.|||| ++.|+.++++|+|-+.. .+..||||
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g~~~~~~~l~V~Ip~G--~~~G~~ir~~G~G~~~~--~g~~GDl~ 77 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKSIRNEDKILTIEVKKG--WKEGTKITFPKEGDQTS--NNIPADIV 77 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSCEEEEEEEEEEEECTT--CCTTCEEEETTCSCCCS--SSCCCCEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCceEEEEeEEEEEEECCC--ccCCcEEEEeeccccCC--CCCcccEE
Confidence 46899999999999999998776532 34 5789999999 89999999999999865 34689999
Q ss_pred EEEEEEcCC
Q 014800 336 IQFNVEFPE 344 (418)
Q Consensus 336 v~~~V~~P~ 344 (418)
|.++|.-..
T Consensus 78 v~i~~~~h~ 86 (181)
T 3agx_A 78 FVLKDKPHN 86 (181)
T ss_dssp EEEEECCCS
T ss_pred EEEEEeccc
Confidence 999987433
No 51
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=97.82 E-value=2.6e-06 Score=60.69 Aligned_cols=33 Identities=27% Similarity=0.821 Sum_probs=27.8
Q ss_pred eEEeeeCCCCCCceeEEecCCCCCccCCceEEEee
Q 014800 185 QQMQHVCPECRGAGEVISERDKCPQCKANKVTQEK 219 (418)
Q Consensus 185 ~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~ 219 (418)
|+++.+|+.|+|+|.++. ++|+.|+|+|++.+.
T Consensus 6 qq~~~~C~~C~GsG~~i~--~~C~~C~G~G~v~~~ 38 (53)
T 3lcz_A 6 DDLETTCPNCNGSGREEP--EPCPKCLGKGVILTA 38 (53)
T ss_dssp HHHEEECTTTTTSCEETT--EECTTTTTSSEEECH
T ss_pred CceeccCcCCcccccCCC--CcCCCCCCcEEEEEE
Confidence 456789999999999886 899999999987654
No 52
>1exk_A DNAJ protein; extended beta-hairpin, CXXCXGXG, zinc-binding motif, chaperone; NMR {Escherichia coli} SCOP: g.54.1.1
Probab=97.77 E-value=6.8e-06 Score=63.46 Aligned_cols=57 Identities=33% Similarity=0.703 Sum_probs=41.3
Q ss_pred hhhccceeeeeeeeeeecCCCCCCCCccCC------cccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeEE
Q 014800 131 DLYNGTTKKLSLSRNILCPKCKGKGSKSGA------LGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVI 201 (418)
Q Consensus 131 e~~~G~~~~~~~~r~~~C~~C~G~G~~~~~------~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~ 201 (418)
..++|.... .......|+.|+|+|..... ..+|+.|+|+|.++. .+|+.|+|.|.+.
T Consensus 15 ~~C~G~G~~-~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~-------------~~C~~C~G~G~~~ 77 (79)
T 1exk_A 15 DVCHGSGAK-PGTQPQTCPTCHGSGQVQMRQGFFAVQQTCPHCQGRGTLIK-------------DPCNKCHGHGRVE 77 (79)
T ss_dssp GGGTTTSBC-SSSCCEECTTTTTSSEEEEEETTEEEEEECTTTTTSSEECS-------------SBCGGGTTSSEEE
T ss_pred CCCcccccC-CCccCCCCCCCcCeEEEEEEcCCCEEeeECcCCCCccEECC-------------CcCCCCCCeEEEe
Confidence 445565543 23345689999999975421 257999999998642 6899999999874
No 53
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.69 E-value=1.5e-05 Score=65.01 Aligned_cols=58 Identities=31% Similarity=0.648 Sum_probs=41.5
Q ss_pred hhhccceeeeeeeeeeecCCCCCCCCcc---C---CcccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeEEe
Q 014800 131 DLYNGTTKKLSLSRNILCPKCKGKGSKS---G---ALGKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVIS 202 (418)
Q Consensus 131 e~~~G~~~~~~~~r~~~C~~C~G~G~~~---~---~~~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~ 202 (418)
+.+.|...+ .-.....|+.|+|+|... + ...+|+.|+|+|.++. .+|+.|+|.|.+..
T Consensus 32 ~~C~G~G~~-~g~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~i~-------------~~C~~C~G~G~v~~ 95 (104)
T 2ctt_A 32 ERCNGKGNE-PGTKVQHCHYCGGSGMETINTGPFVMRSTCRRCGGRGSIII-------------SPCVVCRGAGQAKQ 95 (104)
T ss_dssp SSSSSSSSC-TTCCCEECSSSSSSCEEEEEETTEEEEEECSSSSSSSEECS-------------SCCSSSSSCSEECC
T ss_pred CCCcCCccC-CCCCCccCCCCCCCEEEEEEeCCEEEEEECCcCCCcceECC-------------CcCCCCCCeeEEEE
Confidence 345565443 223356899999999652 1 2357999999998653 78999999998764
No 54
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=97.32 E-value=2.1e-06 Score=91.02 Aligned_cols=78 Identities=14% Similarity=0.213 Sum_probs=56.3
Q ss_pred EEeccchhhhhhccceeeeeeeeeeecCCCCCCCCccCC----cccCCCCCCccEEEE--------EEeeccceeeEEee
Q 014800 122 VHTLKVSLEDLYNGTTKKLSLSRNILCPKCKGKGSKSGA----LGKCYGCQGTGMKIT--------TRQIGLGMIQQMQH 189 (418)
Q Consensus 122 ~~~l~vslee~~~G~~~~~~~~r~~~C~~C~G~G~~~~~----~~~C~~C~G~G~~~~--------~~~~gpg~~~~~~~ 189 (418)
.+.+.++|+|+..|.++++.+.+...|..|+|+|.+.+. ..+|+.|+|+..... .+.+=.|.+-+...
T Consensus 168 ~~~l~i~feeA~~G~~k~i~v~~~~~C~tCHGsGA~~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~ 247 (669)
T 3pmq_A 168 ITNQHYDWQSSGNMLAYTRNLVSIDTCNSCHSNLAFHGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSIS 247 (669)
T ss_dssp SCCCEEEEECSSSSCCCCCCCCCSHHHHHHHSSCCTTTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTT
T ss_pred eEEEEEEhHHhhCCCceEEEeccCCcCCCCCCCCCcCCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccC
Confidence 357788999999999999999999999999999998875 468999999941100 00000011112246
Q ss_pred eCCCCCCcee
Q 014800 190 VCPECRGAGE 199 (418)
Q Consensus 190 ~C~~C~G~G~ 199 (418)
.|..|+..+.
T Consensus 248 ~C~~CH~~~~ 257 (669)
T 3pmq_A 248 NCQTCHADNP 257 (669)
T ss_dssp CCTTTSCCCT
T ss_pred cchhhcCCcc
Confidence 7999998775
No 55
>3lcz_A YCZA, inhibitor of trap, regulated by T-box (Trp) seque; anti-trap, tryptophan RNA-binding attenuation PROT transcription attenuation; 2.06A {Bacillus licheniformis} PDB: 3ld0_A
Probab=96.91 E-value=0.00027 Score=50.19 Aligned_cols=26 Identities=35% Similarity=0.920 Sum_probs=13.7
Q ss_pred eecCCCCCCCCccCCcccCCCCCCccEE
Q 014800 146 ILCPKCKGKGSKSGALGKCYGCQGTGMK 173 (418)
Q Consensus 146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~ 173 (418)
.+|+.|+|+|.... .+|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~i~--~~C~~C~G~G~v 35 (53)
T 3lcz_A 10 TTCPNCNGSGREEP--EPCPKCLGKGVI 35 (53)
T ss_dssp EECTTTTTSCEETT--EECTTTTTSSEE
T ss_pred ccCcCCcccccCCC--CcCCCCCCcEEE
Confidence 45666666665432 345555555543
No 56
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.89 E-value=0.00028 Score=50.08 Aligned_cols=26 Identities=38% Similarity=1.008 Sum_probs=12.5
Q ss_pred eecCCCCCCCCccCCcccCCCCCCccEE
Q 014800 146 ILCPKCKGKGSKSGALGKCYGCQGTGMK 173 (418)
Q Consensus 146 ~~C~~C~G~G~~~~~~~~C~~C~G~G~~ 173 (418)
..|+.|+|+|.... .+|+.|+|+|.+
T Consensus 10 ~~C~~C~GsG~~~~--~~C~~C~G~G~v 35 (53)
T 2bx9_A 10 VACPKCERAGEIEG--TPCPACSGKGVI 35 (53)
T ss_dssp EECTTTTTSSEETT--EECTTTTTSSEE
T ss_pred ccCCCCcceeccCC--CCCccCCCCccE
Confidence 34555555554421 345555555543
No 57
>2bx9_A Anti-trap, AT, tryptophan RNA-binding attenuator protein-inhibit protein; transcription regulation; 2.80A {Bacillus subtilis} PDB: 2ko8_A* 2zp8_E* 2zp9_C*
Probab=96.75 E-value=0.00055 Score=48.60 Aligned_cols=11 Identities=27% Similarity=0.673 Sum_probs=5.7
Q ss_pred cCCCCCCccEE
Q 014800 163 KCYGCQGTGMK 173 (418)
Q Consensus 163 ~C~~C~G~G~~ 173 (418)
+|+.|+|+|.+
T Consensus 11 ~C~~C~GsG~~ 21 (53)
T 2bx9_A 11 ACPKCERAGEI 21 (53)
T ss_dssp ECTTTTTSSEE
T ss_pred cCCCCcceecc
Confidence 45555555543
No 58
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=92.37 E-value=0.053 Score=57.72 Aligned_cols=48 Identities=17% Similarity=0.199 Sum_probs=38.8
Q ss_pred CCCcccccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhh
Q 014800 9 SNNTKYYEILGVSKSATE--DELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEV 60 (418)
Q Consensus 9 ~~~~~~Y~iLgv~~~As~--~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYev 60 (418)
....+||.+||++.++.. .+|++|||+||+..+++ .++|+.+..|+.|
T Consensus 626 ~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~----~~r~~lvd~a~~v 675 (681)
T 2pzi_A 626 DNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ----RHRYTLVDMANKV 675 (681)
T ss_dssp SCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH----HHHHHHHHHHHHH
T ss_pred ccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh----HHHHHHHHHhccc
Confidence 344569999999777766 78999999999965554 3789999999876
No 59
>2vl6_A SSO MCM N-TER, minichromosome maintenance protein MCM; helicase, hydrolase, zinc-finger, ATP-binding, DNA-BIND ssDNA binding; 2.8A {Sulfolobus solfataricus}
Probab=63.31 E-value=30 Score=32.01 Aligned_cols=65 Identities=17% Similarity=0.276 Sum_probs=32.9
Q ss_pred eeeCCCCCCceeEEecCCCCCccCCceEEEeeEEEEEEecC-CCcCCC---eeeecCCcCCCCCCCCccEEEEEEE
Q 014800 188 QHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEK-GMQHGQ---KIAFEGQADEAPDTITGDIVFILQL 259 (418)
Q Consensus 188 ~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~-G~~~G~---~i~~~G~G~~~~g~~~GDliv~i~~ 259 (418)
...|+.|..+|......+.| .-.+...++|.=.| .+..|+ .|.+.=.++-.....|||-+.+.=+
T Consensus 168 P~~Cp~C~~~~~~~l~~~~s-------~f~D~Q~ikiQE~pe~vp~G~~Prsi~v~l~~dLvd~~~PGDrV~vtGI 236 (268)
T 2vl6_A 168 PTICPKCGKPGQFRLIPEKT-------KLIDWQKAVIQERPEEVPSGQLPRQLEIILEDDLVDSARPGDRVKVTGI 236 (268)
T ss_dssp CSBCTTTCCBCEEEECGGGC-------EEEEEEEEEEECCGGGSCTTSCCCEEEEEEEGGGTTSSCTTCEEEEEEE
T ss_pred CccCCCCCCCCCEEEecCcc-------EEEeeEEEEEEeCCCCCCCCCCCcEEEEEEccCccCcccCCCEEEEEEE
Confidence 35688888776333222222 33455566653222 233333 2333334444445679998885544
No 60
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=62.02 E-value=53 Score=30.49 Aligned_cols=85 Identities=20% Similarity=0.306 Sum_probs=37.7
Q ss_pred ccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeEEecCCCCCccCCceEEEeeEEEEEEecCC-CcCCC---eee
Q 014800 162 GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANKVTQEKKVLEVHVEKG-MQHGQ---KIA 237 (418)
Q Consensus 162 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g~~~~~~~l~V~Ip~G-~~~G~---~i~ 237 (418)
..|..|+-.. ...+....+ .....|+.|.++|..+. .+.| .-.+...++|.=.|. +..|+ .|.
T Consensus 135 f~C~~C~~~~---~v~~~~~~~--~~P~~Cp~C~~~~f~l~-~~~s-------~f~D~Q~ikiQE~pe~vp~G~~Prsi~ 201 (279)
T 1ltl_A 135 FECRGCMRHH---AVTQSTNMI--TEPSLCSECGGRSFRLL-QDES-------EFLDTQTLKLQEPLENLSGGEQPRQIT 201 (279)
T ss_dssp EEETTTCCEE---EEECSSSSC--CCCSCCTTTCCCCEEEC-GGGC-------EEEEEEEEEEECCSTTCCSSCCCCEEE
T ss_pred EEcCCCCCEE---EEEecCCcc--cCCCcCCCCCCCCcEEe-cccc-------EEEeeEEEEEecCcccCCCCCCCeEEE
Confidence 4588887442 222222111 12356887877773332 1222 234445555543322 33333 122
Q ss_pred ecCCcCCCCCCCCccEEEEEEE
Q 014800 238 FEGQADEAPDTITGDIVFILQL 259 (418)
Q Consensus 238 ~~G~G~~~~g~~~GDliv~i~~ 259 (418)
+.=.++-.....|||-+.+.=+
T Consensus 202 V~l~~dLvd~~~PGDrV~vtGI 223 (279)
T 1ltl_A 202 VVLEDDLVDTLTPGDIVRVTGT 223 (279)
T ss_dssp EEEEGGGTTCCCTTCEEEEEEE
T ss_pred EEEcccccCccCCCCEEEEEEE
Confidence 2223333334557776665443
No 61
>3jt0_A Lamin-B1; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, HR5546A, LMNB1_human; 2.39A {Homo sapiens}
Probab=59.21 E-value=17 Score=30.74 Aligned_cols=52 Identities=13% Similarity=0.133 Sum_probs=36.3
Q ss_pred HhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEE
Q 014800 283 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQ 337 (418)
Q Consensus 283 Al~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~ 337 (418)
.|-|+++.- ..||+.+..++|++-+++||..+.|-..|--.. .....||+-+
T Consensus 51 ~LgGW~L~r-~v~g~~~~y~FP~~~~L~pg~~VtVwa~g~g~~--~~pp~dlv~~ 102 (144)
T 3jt0_A 51 PMGGWEMIR-KIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVT--ASPPTDLIWK 102 (144)
T ss_dssp ECTTCEEEE-EETTEEEEEECCTTCEECTTCEEEEEETTSCCC--CBTTTEEEET
T ss_pred ecCCcEEEE-EeCCCceEEEcCCCcEECCCCEEEEEECCCCCC--CCCChhheec
Confidence 456676653 457776778999999999999999987775322 1224677654
No 62
>2lll_A Lamin-B2; immunoglobulin-like fold, structural protein, NESG, northeas structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=52.10 E-value=22 Score=29.83 Aligned_cols=51 Identities=16% Similarity=0.193 Sum_probs=35.1
Q ss_pred HhcCcEEEEeecCCc-EEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEE
Q 014800 283 ALCGFQFALTHLDGR-QLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYI 336 (418)
Q Consensus 283 Al~G~~~~i~~ldG~-~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v 336 (418)
.|-|+++.= ..||+ .+..+.|++-+++||..++|-..|.-.... ...||+.
T Consensus 47 ~L~GW~L~r-~v~g~~~~~y~Fp~~~~L~pg~~VtIws~~~g~~~~--pp~dlv~ 98 (139)
T 2lll_A 47 SLGNWRIKR-QVLEGEEIAYKFTPKYILRAGQMVTVWAAGAGVAHS--PPSTLVW 98 (139)
T ss_dssp ECSSCEEEE-EETTSCEEEEECCTTCEECTTCEEEEEEGGGTCCCB--TTTEEEE
T ss_pred ccCCCEEEE-ecCCCccEEEEECCCcEECCCCEEEEEeCCCCCCCC--CchhEEE
Confidence 456676654 34554 478899999999999999999887532212 2467765
No 63
>2pk2_A Cyclin-T1, protein TAT; TAR, twinning, transcription regulation P- TEFB, cell cycle; 2.67A {Homo sapiens} SCOP: a.74.1.1 a.74.1.1 PDB: 2w2h_C
Probab=45.91 E-value=26 Score=34.06 Aligned_cols=28 Identities=11% Similarity=0.124 Sum_probs=22.6
Q ss_pred CcccccccCCCCCCCHHHHHHHHHHHHHHh
Q 014800 11 NTKYYEILGVSKSATEDELKKAYRKAAMKN 40 (418)
Q Consensus 11 ~~~~Y~iLgv~~~As~~eIkkAYrkla~k~ 40 (418)
...++++|.. +.+.++|+..++.+...|
T Consensus 218 ~~~W~~~~~~--~vt~~~l~~i~~~il~~y 245 (358)
T 2pk2_A 218 GKHWWEYVDA--TVTLELLDELTHEFLQIL 245 (358)
T ss_dssp SCCTTTTSCS--SCCHHHHHHHHHHHHHHT
T ss_pred ccchHHHHhc--cCCHHHHHHHHHHHHHHH
Confidence 4568888743 568999999999999887
No 64
>3pmq_A Decaheme cytochrome C MTRF; greek KEY, C type cytochrome, outer membrane, electron trans; HET: HEC; 3.20A {Shewanella oneidensis}
Probab=43.69 E-value=2.6 Score=44.67 Aligned_cols=47 Identities=19% Similarity=0.441 Sum_probs=30.5
Q ss_pred ccCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCceeE-------------------EecCCCCCccCCceE
Q 014800 162 GKCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGEV-------------------ISERDKCPQCKANKV 215 (418)
Q Consensus 162 ~~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~~-------------------~~~~~~C~~C~G~g~ 215 (418)
.+|..|+|+|.. +|-......+|+.|+|.... ......|..|+....
T Consensus 192 ~~C~tCHGsGA~-------~Gt~~~~~~tC~tCHGs~~~~~~~~~~~~~iH~iH~G~fP~~~~~C~~CH~~~~ 257 (669)
T 3pmq_A 192 DTCNSCHSNLAF-------HGGRYNQVETCVTCHNSKKVSNAADIFPQMIHSKHLTGFPQSISNCQTCHADNP 257 (669)
T ss_dssp HHHHHHHSSCCT-------TTTTSCSSSCSTTTSSTTTCCCSSCSHHHHHHHHTTSSCSSCTTCCTTTSCCCT
T ss_pred CcCCCCCCCCCc-------CCccCcCCccCCCCCCCcccCCccccccceeeeeeccCCCCccCcchhhcCCcc
Confidence 569999999962 33211123789999998311 122467999998653
No 65
>2hcz_X Beta-expansin 1A; domain 1 is A beta barrel and domain 2 is A immunoglobulin L sandwich, allergen; HET: NAG MAN FCA; 2.75A {Zea mays}
Probab=42.47 E-value=1.2e+02 Score=27.65 Aligned_cols=57 Identities=19% Similarity=0.420 Sum_probs=31.8
Q ss_pred EEEEEEecCC--Cc---cccccceeeeccCCHHHHhcC-cEEEEeecCCcEEEEE--eCCCcccCCCcEE
Q 014800 254 VFILQLKEHP--KF---KRKFDDLYVDHTLSLTEALCG-FQFALTHLDGRQLLIK--SNPGEIIKPGQYK 315 (418)
Q Consensus 254 iv~i~~~~h~--~f---~R~g~dL~~~~~I~l~eAl~G-~~~~i~~ldG~~l~v~--i~~g~vi~~g~~~ 315 (418)
|..|+|+... .| +|.-...+..-.-+ .|.| ++|.|++.||++|... +|++ -++|++.
T Consensus 174 V~~V~ik~~~~~~W~~m~r~~G~~W~~~~~~---~l~gpls~RvT~~~G~~v~~~nViP~~--w~~g~ty 238 (245)
T 2hcz_X 174 IVLMEIQDKLSAEWKPMKLSWGAIWRMDTAK---ALKGPFSIRLTSESGKKVIAKDVIPAN--WRPDAVY 238 (245)
T ss_dssp EEEEEBCCSSSCSCBCCEEEETTEEECSCCS---SCCSSCCEEEEETTSCEEEESCSCCSS--CCTTCEE
T ss_pred EEEEEEEeCCCCceeECccCCCCEEEECCCC---CCCCCEEEEEEEeCCcEEEEeeeecCC--CCCCCEE
Confidence 6777777663 33 33322222221111 1334 6899999999987764 4443 4566655
No 66
>3hn9_A Lamin-B1; structural genomics, structural genomics consortium, SGC, acetylation, chromosomal rearrangement, coiled coil, intermediate filament; 2.00A {Homo sapiens} PDB: 3umn_A 2kpw_A
Probab=42.25 E-value=52 Score=26.80 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=34.9
Q ss_pred HhcCcEEEEeecCCcEEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEE
Q 014800 283 ALCGFQFALTHLDGRQLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQ 337 (418)
Q Consensus 283 Al~G~~~~i~~ldG~~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~ 337 (418)
.|-|+++.- ..||.....+.|++-+++||..+.|-..|--.... ...||+-+
T Consensus 38 ~L~gW~l~r-~v~~~~~~y~Fp~~~~L~pg~~vtVwa~g~g~~~~--pp~dlv~~ 89 (123)
T 3hn9_A 38 PMGGWEMIR-KIGDTSVSYKYTSRYVLKAGQTVTIWAANAGVTAS--PPTDLIWK 89 (123)
T ss_dssp ECTTCEEEE-EETTEEEEEECCTTCEECTTCEEEEEETTSSCCCB--TTTEEEET
T ss_pred ecCCcEEEE-EeCCCceEEEcCCCcEECCCCEEEEEECCCCCcCC--Cchhheec
Confidence 456777653 34676556899999999999999998877532211 24566543
No 67
>1ifr_A Lamin A/C; immunoglobulin, immune system; 1.40A {Homo sapiens} SCOP: b.1.16.1 PDB: 1ivt_A 3gef_A
Probab=41.23 E-value=45 Score=27.14 Aligned_cols=51 Identities=18% Similarity=0.131 Sum_probs=35.1
Q ss_pred HhcCcEEEEeecCCc-EEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEE
Q 014800 283 ALCGFQFALTHLDGR-QLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYI 336 (418)
Q Consensus 283 Al~G~~~~i~~ldG~-~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v 336 (418)
.|-|+++.=. .+|+ .+..+.|++-+++||..++|-..|.-.... ...||+-
T Consensus 32 ~L~gW~l~r~-v~~~~~~~y~Fp~~~~L~pg~~vtIws~~~g~~~~--pp~dlv~ 83 (121)
T 1ifr_A 32 SMGNWQIKRQ-NGDDPLLTYRFPPKFTLKAGQVVTIWAAGAGATHS--PPTDLVW 83 (121)
T ss_dssp ECTTCEEEEE-ETTSCCEEEECCSSCEECTTCEEEEEETTSSCCCB--TTTEEEE
T ss_pred ccCCCEEEEE-cCCCccEEEEeCCCcEECCCCEEEEEeCCCCCCCC--CchhEEE
Confidence 4567766543 4554 378899999999999999999887533212 2366665
No 68
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=41.00 E-value=24 Score=25.97 Aligned_cols=51 Identities=22% Similarity=0.356 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCChhhh-Hhhh--hhhhhcCC-cccccccccc
Q 014800 23 SATEDELKKAYRKAAMKNHPDKGGDPEKF-KELG--QAYEVLSD-PEKRDIYDQY 73 (418)
Q Consensus 23 ~As~~eIkkAYrkla~k~HPDkn~~~~kF-kei~--~AYevLsD-~~kR~~YD~~ 73 (418)
-+|.+|.+.||++|-..++-+-.-.=++. +.|. .-|.+|.+ .+++++|+.|
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~tWe~~~~~i~~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNASWEQAMKMIINDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCCHHHHHHHHHTSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCCHHHHHHHHccCccccccCCHHHHHHHHHHH
Confidence 57999999999999998753332211222 2221 23777776 4556666665
No 69
>1ufg_A Lamin A, nuclear lamin; immunoglobulin like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, structural protein; NMR {Mus musculus} SCOP: b.1.16.1
Probab=37.29 E-value=58 Score=27.61 Aligned_cols=52 Identities=15% Similarity=0.114 Sum_probs=35.6
Q ss_pred HhcCcEEEEeecCCc-EEEEEeCCCcccCCCcEEEecCCCCCCCCCCCCCCCeEEE
Q 014800 283 ALCGFQFALTHLDGR-QLLIKSNPGEIIKPGQYKAINDEGMPHHQRPFMKGRLYIQ 337 (418)
Q Consensus 283 Al~G~~~~i~~ldG~-~l~v~i~~g~vi~~g~~~~i~g~Gmp~~~~~~~~GdL~v~ 337 (418)
.|-|+++.=. .||. .+..+.|++-+++||..+.|-..+.-... ....||+.+
T Consensus 63 ~L~GW~L~r~-vdg~~~~~y~Fp~~~~L~pg~tVtIws~~~g~~~--~pp~dlv~k 115 (151)
T 1ufg_A 63 SMGNWQIRRQ-NGDDPLMTYRFPPKFTLKAGQVVTIWASGAGATH--SPPTDLVWK 115 (151)
T ss_dssp ECSSCEEEEE-ETTSCCEEEECCTTCEECTTCEEEEEESSSSCCC--CTTTEEEEC
T ss_pred ccCCCEEEEe-cCCCccEEEEECCCcEECCCCEEEEEeCCCCCCC--CCchhEEEe
Confidence 4567766533 3554 37889999999999999999988753221 224677653
No 70
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=34.93 E-value=38 Score=33.57 Aligned_cols=36 Identities=14% Similarity=0.238 Sum_probs=18.3
Q ss_pred ccCCCCCCccEEEEEEeeccce--eeEEeeeCCCCCCc
Q 014800 162 GKCYGCQGTGMKITTRQIGLGM--IQQMQHVCPECRGA 197 (418)
Q Consensus 162 ~~C~~C~G~G~~~~~~~~gpg~--~~~~~~~C~~C~G~ 197 (418)
..|+.|+..|......-.-|.| +--+...|+.|+=+
T Consensus 221 s~Cp~C~~~~~t~~~~~~IP~F~eViims~~C~~CGyr 258 (404)
T 2qkd_A 221 TNCPECNAPAQTNMKLVQIPHFKEVIIMATNCENCGHR 258 (404)
T ss_dssp ECCTTTCCTTCEEEEEECCTTSCCEEEEEEECSSSCCE
T ss_pred ccCccCCCccEEEEEEEeCCCCCcEEEEEEECCCCCCc
Confidence 3466666666643332222322 12245678888654
No 71
>2bx2_L Ribonuclease E, RNAse E; RNA-binding, RNA turnover, RNA processing, hydrolase, endonu nuclease; 2.85A {Escherichia coli} PDB: 2c0b_L 2c4r_L 2vmk_A 2vrt_A 1slj_A 1smx_A 1sn8_A
Probab=34.02 E-value=7.1 Score=40.11 Aligned_cols=32 Identities=28% Similarity=0.679 Sum_probs=20.9
Q ss_pred cEEEEE-EeeccceeeEEeeeCCCCCCceeEEe
Q 014800 171 GMKITT-RQIGLGMIQQMQHVCPECRGAGEVIS 202 (418)
Q Consensus 171 G~~~~~-~~~gpg~~~~~~~~C~~C~G~G~~~~ 202 (418)
|.+..+ ++.++.+...+..+||.|+|+|.+.+
T Consensus 390 GLvEmTRkR~r~sL~e~~~~~Cp~C~G~G~v~s 422 (517)
T 2bx2_L 390 GLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRD 422 (517)
T ss_dssp SEEEEEECCCSCCHHHHHCCCCSSSSSSSCCCC
T ss_pred ceEEEeecCcCcChhhhhcCcCCCcCCceeECC
Confidence 444333 34566666666678889988887654
No 72
>1ltl_A DNA replication initiator (CDC21/CDC54); HET: DNA; 3.00A {Methanothermobacterthermautotrophicus} SCOP: b.40.4.11
Probab=31.40 E-value=44 Score=31.08 Aligned_cols=15 Identities=0% Similarity=0.067 Sum_probs=8.6
Q ss_pred CCCHHHHHHHHHHHH
Q 014800 23 SATEDELKKAYRKAA 37 (418)
Q Consensus 23 ~As~~eIkkAYrkla 37 (418)
.+...||++.|+..-
T Consensus 8 ~~~~~~~~~~f~~Fl 22 (279)
T 1ltl_A 8 TVDKSKTLTKFEEFF 22 (279)
T ss_dssp -CCHHHHHHHHHHHT
T ss_pred cCChHHHHHHHHHHh
Confidence 456667777655544
No 73
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=30.93 E-value=25 Score=26.32 Aligned_cols=49 Identities=18% Similarity=0.322 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHhCCCCCCCh------hhhHhhhhhhhhcCC-ccccccccccC
Q 014800 25 TEDELKKAYRKAAMKNHPDKGGDP------EKFKELGQAYEVLSD-PEKRDIYDQYG 74 (418)
Q Consensus 25 s~~eIkkAYrkla~k~HPDkn~~~------~kFkei~~AYevLsD-~~kR~~YD~~G 74 (418)
-+.-++.+|+.+.+...|...... .+|..-. +|..+.+ .+.+.+|+.|=
T Consensus 7 r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 7 GMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp SHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 456789999999888878777653 4555544 7999966 46677888775
No 74
>2qkd_A Zinc finger protein ZPR1; helical hairpins, beta helix, anti-parrallel beta sheet, double straded anti-parallel beta helix, metal binding protein; 2.00A {Mus musculus}
Probab=29.80 E-value=24 Score=34.91 Aligned_cols=36 Identities=14% Similarity=0.176 Sum_probs=21.3
Q ss_pred ccCCCCCCccEEEEEEeeccceee--EEeeeCCCCCCc
Q 014800 162 GKCYGCQGTGMKITTRQIGLGMIQ--QMQHVCPECRGA 197 (418)
Q Consensus 162 ~~C~~C~G~G~~~~~~~~gpg~~~--~~~~~C~~C~G~ 197 (418)
..|+.|+..|......-.-|.|-. -+...|+.|+=+
T Consensus 13 s~Cp~C~~~g~t~~~~~~IP~F~eVii~Sf~C~~CGyr 50 (404)
T 2qkd_A 13 SLCMNCYRNGTTRLLLTKIPFFREIIVSSFSCEHCGWN 50 (404)
T ss_dssp EECTTTSSEEEEEEEEEEETTTEEEEEEEEECTTTCCE
T ss_pred ccCCCCCCCceEEEEEEcCCCCceEEEEEEECCCCCCc
Confidence 458888877775444333342222 245778888755
No 75
>2kdx_A HYPA, hydrogenase/urease nickel incorporation protein HYPA; metallochaperone, metal-binding, metal- binding protein; NMR {Helicobacter pylori}
Probab=27.37 E-value=50 Score=26.47 Aligned_cols=41 Identities=10% Similarity=0.215 Sum_probs=21.8
Q ss_pred hhccceeeee-eeeeeecCCCCCCCCccCCcc-cCCCCCCccE
Q 014800 132 LYNGTTKKLS-LSRNILCPKCKGKGSKSGALG-KCYGCQGTGM 172 (418)
Q Consensus 132 ~~~G~~~~~~-~~r~~~C~~C~G~G~~~~~~~-~C~~C~G~G~ 172 (418)
++.|+...+. ..-...|..|.-.-....... .||.|.+.-.
T Consensus 59 ~~e~a~L~i~~~p~~~~C~~CG~~~e~~~~~~~~CP~Cgs~~~ 101 (119)
T 2kdx_A 59 VCKDAILDIVDEKVELECKDCSHVFKPNALDYGVCEKCHSKNV 101 (119)
T ss_dssp TTSSCCEEEEEECCEEECSSSSCEECSCCSTTCCCSSSSSCCC
T ss_pred hhcCcEEEEEeccceEEcCCCCCEEeCCCCCCCcCccccCCCc
Confidence 3444444432 333567888865433333445 6777766644
No 76
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=27.22 E-value=7.4 Score=40.07 Aligned_cols=66 Identities=20% Similarity=0.412 Sum_probs=36.3
Q ss_pred ecCCCCCCCCccCC-----cccCCCCCCccEEEEEE--eeccceeeEEeeeCCCCCCceeEEecCCCCCccCCce
Q 014800 147 LCPKCKGKGSKSGA-----LGKCYGCQGTGMKITTR--QIGLGMIQQMQHVCPECRGAGEVISERDKCPQCKANK 214 (418)
Q Consensus 147 ~C~~C~G~G~~~~~-----~~~C~~C~G~G~~~~~~--~~gpg~~~~~~~~C~~C~G~G~~~~~~~~C~~C~G~g 214 (418)
.|..|++.+..... ...|-.||+.-..+... ..-|.....-...|..||-.-.. ....|..|+...
T Consensus 14 ~C~~CH~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~h~~~~~~~~C~~CH~~h~~--~~~~c~~ch~~~ 86 (566)
T 1qo8_A 14 SCQSCHAKPIKVTDSETHENAQCKSCHGEYAELANDKLQFDPHNSHLGDINCTSCHKGHEE--PKFYCNECHSFD 86 (566)
T ss_dssp CGGGTSCSSCCCCTTCHHHHHHHHHHHCCHHHHCCSSSSSCTTSSTTCSCCGGGTSCSSSC--CCCGGGGTCCCC
T ss_pred ChhhhCCCccccccccCccCCHHhhhCcCHHHHhhccccCCcchhcCCCCCchhhCcCCcC--cCchhhhhcCCC
Confidence 69999998754211 23599999753211000 00000000013689999965432 347899998754
No 77
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=27.01 E-value=33 Score=24.34 Aligned_cols=47 Identities=23% Similarity=0.414 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-hhhhHhh---hhhhhhcCC-c-ccccccccc
Q 014800 27 DELKKAYRKAAMKNHPDKGGD-PEKFKEL---GQAYEVLSD-P-EKRDIYDQY 73 (418)
Q Consensus 27 ~eIkkAYrkla~k~HPDkn~~-~~kFkei---~~AYevLsD-~-~kR~~YD~~ 73 (418)
+|..+||.+|-+...=|-+=+ ....+.| .--|-+|.| | +++++|+.|
T Consensus 3 eEae~aF~~lL~~~~V~s~wsweqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y 55 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWSFSRIISELGTRDPRYWMVDDDPLWKKEMFEKY 55 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCCHHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCcHHHHHHHhccCCCccccccCCHHHHHHHHHHH
Confidence 578899999998764443322 1566677 346999997 5 466778776
No 78
>2rq5_A Protein jumonji; developmental protein, nucleus, repressor, transcription, transcription regulation; NMR {Mus musculus}
Probab=26.41 E-value=15 Score=30.09 Aligned_cols=22 Identities=23% Similarity=0.373 Sum_probs=15.4
Q ss_pred hHhhhhhhhhcCCccccccccc
Q 014800 51 FKELGQAYEVLSDPEKRDIYDQ 72 (418)
Q Consensus 51 Fkei~~AYevLsD~~kR~~YD~ 72 (418)
+..+=.+||.+++.+++...|.
T Consensus 90 Y~k~L~~YE~~~~~e~~~l~~~ 111 (121)
T 2rq5_A 90 YCQYLLSYDSLSPEEHRRLEKE 111 (121)
T ss_dssp HHTTHHHHHHCCHHHHHHHHHH
T ss_pred HHHHhHHHHCcCHHHHhhHHHH
Confidence 4445567888888888877664
No 79
>2vf7_A UVRA2, excinuclease ABC, subunit A.; DNA-binding protein, nucleotide-binding, zinc-binding domain, SOS response, metal-binding; HET: ADP; 2.30A {Deinococcus radiodurans} PDB: 2vf8_A*
Probab=25.38 E-value=25 Score=38.31 Aligned_cols=33 Identities=27% Similarity=0.585 Sum_probs=20.1
Q ss_pred cCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCcee
Q 014800 163 KCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAGE 199 (418)
Q Consensus 163 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G~ 199 (418)
.|+.|.|.|.+....+..| .+..+|+.|+|+..
T Consensus 640 ~c~~c~g~G~~~~~~~f~~----~v~~~c~~c~G~r~ 672 (842)
T 2vf7_A 640 RCEHCQGEGWVMVELLFLP----SVYAPCPVCHGTRY 672 (842)
T ss_dssp BCTTTTTCSEEEETTCSSS----CEEEECTTTTTCCB
T ss_pred ccccccCCCccchhhhcCC----ccceecccccCccc
Confidence 3999999998654222222 23466777777643
No 80
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=25.17 E-value=35 Score=28.42 Aligned_cols=12 Identities=17% Similarity=0.382 Sum_probs=7.5
Q ss_pred eeecCCCCCCCC
Q 014800 145 NILCPKCKGKGS 156 (418)
Q Consensus 145 ~~~C~~C~G~G~ 156 (418)
...|..|.-...
T Consensus 70 ~~~C~~CG~~~~ 81 (139)
T 3a43_A 70 VFKCRNCNYEWK 81 (139)
T ss_dssp EEEETTTCCEEE
T ss_pred cEECCCCCCEEe
Confidence 456888855543
No 81
>2v1y_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit alpha isoform; cancer, SH2 domain, SH3 domain, transferase, oncogen mutations, HOST-virus interaction; 2.4A {Bos taurus}
Probab=24.47 E-value=14 Score=29.72 Aligned_cols=54 Identities=24% Similarity=0.164 Sum_probs=37.7
Q ss_pred ccccccCCCCCCCHHHHHHHHHHHHHHhCCC----CCCChhhhHhhhhhhhh--cCCcccc
Q 014800 13 KYYEILGVSKSATEDELKKAYRKAAMKNHPD----KGGDPEKFKELGQAYEV--LSDPEKR 67 (418)
Q Consensus 13 ~~Y~iLgv~~~As~~eIkkAYrkla~k~HPD----kn~~~~kFkei~~AYev--LsD~~kR 67 (418)
..|-.|.++++||..|||.--=+.|.+| |= +.++.=.|.-||...|+ |-|+.+|
T Consensus 29 Gi~i~l~~~~~~tl~eiK~~lw~eA~~~-PL~~~L~d~~~Y~F~~in~~~e~Eel~DEsrr 88 (108)
T 2v1y_A 29 GMIVTLECLREATLITIKHELFKEARKY-PLHQLLQDESSYIFVSVTQEAEREEFFDETRR 88 (108)
T ss_dssp SCEEEEEEETTCBHHHHHHHHHHHGGGS-TTGGGCCCGGGCEEEEEBTTSCEEEECCTTSB
T ss_pred EEEEEEEeeccccHHHHHHHHHHHHHhC-chHHHhCCccceEEEEecCCceEEEeEcCceE
Confidence 4788899999999999999877778765 21 12222357777775554 7776655
No 82
>3vdz_A Ubiquitin-40S ribosomal protein S27A; gadolinium, MRI contrast agent, peptide-based contrast agent lanthanide binding TAG; 2.40A {Synthetic construct} PDB: 2ojr_A
Probab=24.12 E-value=65 Score=25.31 Aligned_cols=40 Identities=23% Similarity=0.452 Sum_probs=28.3
Q ss_pred cccceeeeccCC---HHHHhcCcEEEEeecCCcEEEEEeCCCc
Q 014800 268 KFDDLYVDHTLS---LTEALCGFQFALTHLDGRQLLIKSNPGE 307 (418)
Q Consensus 268 ~g~dL~~~~~I~---l~eAl~G~~~~i~~ldG~~l~v~i~~g~ 307 (418)
++.++++....+ ..+.....++.|++++|+.+.|.+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~m~I~Vk~~~G~~~~l~v~~~~ 56 (111)
T 3vdz_A 14 DGDELYIDTDNDGSIDGDELLAMQIFVKTLTGKTITLEVEPSD 56 (111)
T ss_dssp CGGGEEECTTCSSCCCTGGGGCEEEEEECSSSCEEEEEECTTC
T ss_pred CCceeccccccccccCcCCCccEEEEEEeCCCCEEEEEeCCCC
Confidence 466777776554 4445556788889999988888877654
No 83
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.08 E-value=2.1e+02 Score=22.70 Aligned_cols=62 Identities=16% Similarity=0.265 Sum_probs=35.9
Q ss_pred HhcCcEEEEeecCCcEEEEEeCCCcc-----cCCCcEEEecCCCCCCCCCCCCCCCeEEEEEEEcCCCCCCCHHHHHHHH
Q 014800 283 ALCGFQFALTHLDGRQLLIKSNPGEI-----IKPGQYKAINDEGMPHHQRPFMKGRLYIQFNVEFPECGILSPDQCRTLE 357 (418)
Q Consensus 283 Al~G~~~~i~~ldG~~l~v~i~~g~v-----i~~g~~~~i~g~Gmp~~~~~~~~GdL~v~~~V~~P~~~~l~~~~~~~L~ 357 (418)
+|-+..+.|...||.++...|| |.. |.+|+.+.|.=. | + ..-.+|+++-+ ++++|++.|+
T Consensus 24 ~lgn~~f~V~l~nG~~~la~i~-GK~Rk~IwI~~GD~VlVe~~--~-y-d~~~kg~Iv~r----------~~~~qvk~L~ 88 (111)
T 2dgy_A 24 TPGNNLHEVETAQGQRFLVSMP-SKYRKNIWIKRGDFLIVDPI--E-E-GEKVKAEISFV----------LCKDHVRSLQ 88 (111)
T ss_dssp CCSSSEEEEECTTSCEEEEECC-TTCCSCCCCCSSCEEEEEEC--S-S-CSSCCEEEEEE----------CCHHHHHHHH
T ss_pred eCCCCEEEEEeCCCCEEEEEec-hhhcccEEEcCCCEEEEEec--c-c-CCcceEEEEEE----------eCHHHHHHHH
Confidence 3444567888888887777765 432 445665555411 1 1 11235555443 6788888887
Q ss_pred hh
Q 014800 358 SV 359 (418)
Q Consensus 358 ~~ 359 (418)
+.
T Consensus 89 k~ 90 (111)
T 2dgy_A 89 KE 90 (111)
T ss_dssp HH
T ss_pred Hc
Confidence 64
No 84
>830c_A MMP-13, MMP-13; matrix metalloprotease; HET: RS1; 1.60A {Homo sapiens} SCOP: d.92.1.11 PDB: 456c_A* 1you_A* 4a7b_A* 3tvc_A* 1eub_A* 1xuc_A* 1xud_A* 1xur_A* 2yig_A* 3elm_A* 3i7g_A* 3i7i_A* 3zxh_A* 2ow9_A* 2ozr_A* 3kek_A* 3kej_A* 3kec_A* 2d1n_A* 1fls_A* ...
Probab=23.97 E-value=73 Score=27.27 Aligned_cols=51 Identities=29% Similarity=0.359 Sum_probs=38.2
Q ss_pred CCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCChhhhHhhh
Q 014800 2 FGRTPRRSNNTKYYEILGVSKSATEDELKKAYRKAAMKNHPDKGGDPEKFKELG 55 (418)
Q Consensus 2 ~~~~~~~~~~~~~Y~iLgv~~~As~~eIkkAYrkla~k~HPDkn~~~~kFkei~ 55 (418)
|+..+++.+..=.|.|.+.+++.+.++++.|.++....|.--. +-+|.+++
T Consensus 4 ~~~~~kW~k~~LTY~I~n~t~~l~~~~v~~ai~~A~~~Ws~vt---~L~F~ev~ 54 (168)
T 830c_A 4 FPRTLKWSKMNLTYRIVNYTPDMTHSEVEKAFKKAFKVWSDVT---PLNFTRLH 54 (168)
T ss_dssp CCSBCCCSSSEEEEEECSCCTTSCHHHHHHHHHHHHHHHHTTS---SCEEEEES
T ss_pred cCCCCcCCCCEEEEEEecCCCCCCHHHHHHHHHHHHHHHHhcc---Ccceeecc
Confidence 5666676666667999999899999999999999888886322 24566654
No 85
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=23.13 E-value=8.1 Score=39.79 Aligned_cols=65 Identities=18% Similarity=0.414 Sum_probs=35.6
Q ss_pred ecCCCCCCCCccC------CcccCCCCCCccEEEEEE----eeccceeeE-EeeeCCCCCCceeEEecCCCCCccCCc
Q 014800 147 LCPKCKGKGSKSG------ALGKCYGCQGTGMKITTR----QIGLGMIQQ-MQHVCPECRGAGEVISERDKCPQCKAN 213 (418)
Q Consensus 147 ~C~~C~G~G~~~~------~~~~C~~C~G~G~~~~~~----~~gpg~~~~-~~~~C~~C~G~G~~~~~~~~C~~C~G~ 213 (418)
.|..|++...... ....|-.||......... ..-|..... -...|..||..=.. ....|..||-.
T Consensus 13 ~C~~CH~~~~~~~~~~~~~~~~~C~~CH~~~~~~~~~~~~~~~~~h~~H~~~~~~C~~CH~~h~~--~~~~C~~CH~~ 88 (571)
T 1y0p_A 13 ECDSCHTPDGELSNDSLTYENTQCVSCHGTLAEVAETTKHEHYNAHASHFPGEVACTSCHSAHEK--SMVYCDSCHSF 88 (571)
T ss_dssp CGGGTSCTTCCCCCTTCHHHHHHHHHHHCCHHHHHTTSCCSSCCTTSCSCCSCCCGGGTCCSSSC--BCCGGGGTCCC
T ss_pred ChhhcCCCcccccccccccccchhhhhCcChhhcccccccccCCccccccCCCCCccccCccccC--CCccccccChh
Confidence 6999999874321 124599999753211000 000000000 13579999975322 34789999975
No 86
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=22.77 E-value=69 Score=26.33 Aligned_cols=53 Identities=23% Similarity=0.207 Sum_probs=35.6
Q ss_pred CCCCCCCH-HHHHHHHHHHHHHhCCCCCCChhhhHhhhhhhhhcCCccccccccccCc
Q 014800 19 GVSKSATE-DELKKAYRKAAMKNHPDKGGDPEKFKELGQAYEVLSDPEKRDIYDQYGE 75 (418)
Q Consensus 19 gv~~~As~-~eIkkAYrkla~k~HPDkn~~~~kFkei~~AYevLsD~~kR~~YD~~G~ 75 (418)
||+|+... .+|-+.++.+...+.++. +++.|..|.+-|. .||.-++.||++|.
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~--s~e~~~~L~~mYv--~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDC--GYEMHTCLGEMYV--SDERFTRNIDAAKP 124 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCC--CHHHHHHHHHHTT--STHHHHHHHGGGST
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCC--CHHHHHHHHHHHh--cCHHHHHhHcccCh
Confidence 55555433 345555666544545544 4588888888886 78999999999864
No 87
>2r6f_A Excinuclease ABC subunit A; UVRA, nucleotide excision repair, DNA repair, ABC ATPase, at cassette, DNA damage, DNA excision; HET: ADP; 3.20A {Geobacillus stearothermophilus} PDB: 3uwx_A
Probab=22.19 E-value=38 Score=37.44 Aligned_cols=32 Identities=22% Similarity=0.646 Sum_probs=20.8
Q ss_pred cCCCCCCccEEEEEEeeccceeeEEeeeCCCCCCce
Q 014800 163 KCYGCQGTGMKITTRQIGLGMIQQMQHVCPECRGAG 198 (418)
Q Consensus 163 ~C~~C~G~G~~~~~~~~gpg~~~~~~~~C~~C~G~G 198 (418)
.|+.|.|.|.+...... ...+..+|+.|+|..
T Consensus 755 rC~~C~g~G~i~~em~f----l~~v~~~ce~c~G~r 786 (972)
T 2r6f_A 755 RCEACHGDGIIKIEMHF----LPDVYVPCEVCHGKR 786 (972)
T ss_dssp BCTTTTTCSEEEECCSS----SCCEEEECTTTTTCC
T ss_pred cccccccccceeeehhc----ccccccccccccccc
Confidence 49999999987543222 223346788888764
No 88
>1n10_A PHL P I, pollen allergen PHL P 1; plant allergen, expansin, immunoglobulin-like fold, PSI beta barrel, structural genomics; HET: NAG; 2.90A {Phleum pratense} SCOP: b.7.3.1 b.52.1.3
Probab=22.13 E-value=3e+02 Score=24.94 Aligned_cols=27 Identities=19% Similarity=0.143 Sum_probs=19.1
Q ss_pred cEEEEeecCCcEEEEE--eCCCcccCCCcEE
Q 014800 287 FQFALTHLDGRQLLIK--SNPGEIIKPGQYK 315 (418)
Q Consensus 287 ~~~~i~~ldG~~l~v~--i~~g~vi~~g~~~ 315 (418)
++|.|++.||++|... +|.+ -++|++.
T Consensus 210 ls~RvT~~~G~~v~~~nViP~~--w~~g~ty 238 (241)
T 1n10_A 210 FTVRYTTEGGTKTEAEDVIPEG--WKADTSY 238 (241)
T ss_dssp EEEEEEESSSCEEEEEEEECSS--CCSSEEE
T ss_pred EEEEEEEeCCcEEEEccccCCC--CCCCCEE
Confidence 6888999999987643 5544 4666654
No 89
>3j20_Y 30S ribosomal protein S27AE; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=22.05 E-value=58 Score=22.13 Aligned_cols=7 Identities=29% Similarity=0.995 Sum_probs=3.9
Q ss_pred eeCCCCC
Q 014800 189 HVCPECR 195 (418)
Q Consensus 189 ~~C~~C~ 195 (418)
..|+.|+
T Consensus 38 ~~C~kCG 44 (50)
T 3j20_Y 38 WACGKCG 44 (50)
T ss_dssp EECSSSC
T ss_pred EECCCCC
Confidence 4566663
No 90
>1sif_A Ubiquitin; hydrophobic mutants, folding, stability, structural protein; 2.18A {Homo sapiens} SCOP: d.15.1.1
Probab=20.81 E-value=76 Score=23.58 Aligned_cols=25 Identities=24% Similarity=0.573 Sum_probs=17.9
Q ss_pred HhcCcEEEEeecCCcEEEEEeCCCc
Q 014800 283 ALCGFQFALTHLDGRQLLIKSNPGE 307 (418)
Q Consensus 283 Al~G~~~~i~~ldG~~l~v~i~~g~ 307 (418)
-|-|.++.|.+++|+.+.|.+++..
T Consensus 6 ~~~~~~i~v~~~~G~~~~l~v~~~~ 30 (88)
T 1sif_A 6 HLQGLQLFIKTLTGKTFTVEMEPSD 30 (88)
T ss_dssp ----CEEEEEETTSCEEEEECCTTS
T ss_pred cccceEEEEEeCCCCEEEEEECCCC
Confidence 3678899999999998888887654
No 91
>2apo_B Ribosome biogenesis protein NOP10; protein-protein complex, box H/ACA, snoRNP, pseudouridine synthase, RNA modification; 1.95A {Methanocaldococcus jannaschii} SCOP: g.41.16.1 PDB: 2aqc_A
Probab=20.67 E-value=41 Score=23.97 Aligned_cols=21 Identities=29% Similarity=1.024 Sum_probs=12.6
Q ss_pred eeCCCCCCceeEEecCCCCCccCCc
Q 014800 189 HVCPECRGAGEVISERDKCPQCKAN 213 (418)
Q Consensus 189 ~~C~~C~G~G~~~~~~~~C~~C~G~ 213 (418)
..|+.|. +.+.++.|+.|.+.
T Consensus 7 r~C~~Cg----vYTLk~~CP~CG~~ 27 (60)
T 2apo_B 7 KKCPKCG----LYTLKEICPKCGEK 27 (60)
T ss_dssp EECTTTC----CEESSSBCSSSCSB
T ss_pred eeCCCCC----CEeccccCcCCCCc
Confidence 5677772 22236777777754
No 92
>1vq8_S 50S ribosomal protein L23P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.12.1.1 PDB: 1vq4_S* 1vq5_S* 1vq6_S* 1vq7_S* 1s72_S* 1vq9_S* 1vqk_S* 1vql_S* 1vqm_S* 1vqn_S* 1vqo_S* 1vqp_S* 1yhq_S* 1yi2_S* 1yij_S* 1yit_S* 1yj9_S* 1yjn_S* 1yjw_S* 2otj_S* ...
Probab=20.08 E-value=48 Score=25.25 Aligned_cols=21 Identities=19% Similarity=0.256 Sum_probs=18.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHH
Q 014800 17 ILGVSKSATEDELKKAYRKAA 37 (418)
Q Consensus 17 iLgv~~~As~~eIkkAYrkla 37 (418)
++-|+++|+..|||+|-.+|-
T Consensus 26 ~F~V~~~AnK~qIK~ave~lf 46 (85)
T 1vq8_S 26 QFAVDDRASKGEVADAVEEQY 46 (85)
T ss_dssp EEEECTTCCHHHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHHHh
Confidence 677999999999999998875
Done!