Your job contains 1 sequence.
>014802
MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI
IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL
PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR
WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC
GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM
GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE
HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFLITVQLNH
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014802
(418 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504956460 - symbol:DPB2 "DNA polymerase epsilo... 1439 2.4e-147 1
DICTYBASE|DDB_G0278367 - symbol:DDB_G0278367 "putative DN... 553 1.9e-53 1
ZFIN|ZDB-GENE-020419-16 - symbol:pole2 "polymerase (DNA d... 538 7.2e-52 1
RGD|1311962 - symbol:Pole2 "polymerase (DNA directed), ep... 520 5.8e-50 1
UNIPROTKB|Q5ZKQ6 - symbol:POLE2 "DNA polymerase epsilon s... 519 7.4e-50 1
UNIPROTKB|A7YWS7 - symbol:POLE2 "DNA polymerase epsilon s... 517 1.2e-49 1
UNIPROTKB|F1MKI8 - symbol:POLE2 "DNA polymerase epsilon s... 516 1.5e-49 1
UNIPROTKB|E2RCT9 - symbol:DNAAF2 "Uncharacterized protein... 514 2.5e-49 1
UNIPROTKB|J9PBE8 - symbol:DNAAF2 "Uncharacterized protein... 514 2.5e-49 1
UNIPROTKB|F1SHZ5 - symbol:POLE2 "Uncharacterized protein"... 514 2.5e-49 1
UNIPROTKB|P56282 - symbol:POLE2 "DNA polymerase epsilon s... 512 4.1e-49 1
MGI|MGI:1197514 - symbol:Pole2 "polymerase (DNA directed)... 511 5.2e-49 1
POMBASE|SPBP8B7.14c - symbol:dpb2 "DNA polymerase epsilon... 489 8.7e-49 2
UNIPROTKB|E1C2T8 - symbol:POLE2 "DNA polymerase epsilon s... 500 7.7e-48 1
FB|FBgn0035644 - symbol:Pole2 "Pole2" species:7227 "Droso... 346 2.6e-31 1
WB|WBGene00017237 - symbol:pole-2 species:6239 "Caenorhab... 306 9.9e-27 1
ASPGD|ASPL0000068420 - symbol:AN7439 species:162425 "Emer... 151 1.1e-15 3
SGD|S000006379 - symbol:DPB2 "Second largest subunit of D... 218 6.7e-15 1
CGD|CAL0000130 - symbol:DPB2 species:5476 "Candida albica... 122 3.3e-11 2
UNIPROTKB|Q5ACS8 - symbol:DPB2 "Potential DNA polymerase ... 122 3.3e-11 2
>TAIR|locus:504956460 [details] [associations]
symbol:DPB2 "DNA polymerase epsilon subunit B2"
species:3702 "Arabidopsis thaliana" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA;ISS]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] [GO:0008622 "epsilon
DNA polymerase complex" evidence=IPI] InterPro:IPR007185
InterPro:IPR016266 Pfam:PF04042 PIRSF:PIRSF000799 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0006261 GO:GO:0008622
GO:GO:0003887 eggNOG:NOG311342 KO:K02325 HOGENOM:HOG000265254
OMA:PNHFVKT UniGene:At.44338 UniGene:At.45633 EMBL:BT022108
IPI:IPI00516525 RefSeq:NP_680197.2 ProteinModelPortal:Q500V9
STRING:Q500V9 PaxDb:Q500V9 PRIDE:Q500V9 EnsemblPlants:AT5G22110.1
GeneID:832272 KEGG:ath:AT5G22110 TAIR:At5g22110 InParanoid:Q500V9
PhylomeDB:Q500V9 ProtClustDB:CLSN2695393 Genevestigator:Q500V9
Uniprot:Q500V9
Length = 526
Score = 1439 (511.6 bits), Expect = 2.4e-147, P = 2.4e-147
Identities = 285/409 (69%), Positives = 326/409 (79%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSII 61
+ Q RKKIQKK K RGY L+ DALDEIL F ++FP E+ KSS +
Sbjct: 4 TSQKRKKIQKKFKNRGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNLQETH-KSSTV 62
Query: 62 DKESVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
D ESV + + LL S++ +IDAFLVPKF YDS+KK F +H SLP
Sbjct: 63 DAESVRGLINRLLGAHNAPEEPTTSA---SSLAIIDAFLVPKFGYDSVKKKFNEHTSSLP 119
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRW 181
IHGEASAK ALYR+RF+LL QRVSR +HFSRP+FD S+F + EIS+IQSL+ Q GR+W
Sbjct: 120 IHGEASAKTALYRERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKW 179
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241
VMGVISQLEDGHFYLEDL+ASVEIDLSKAKITTGFFTENTI++AEGEM V+GIFQVITCG
Sbjct: 180 VMGVISQLEDGHFYLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCG 239
Query: 242 FPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMG 301
FPPLEDRD++LK + YDFFGGGTL KE+ ++LADLE++A ND FVILSDIWLD+EEVM
Sbjct: 240 FPPLEDRDKTLKAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMR 299
Query: 302 KLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEH 361
KLE VLDGFESVE VPSLFVFMGNFCS PCNLSF S+SSLR QFGKLG+MI HPRLKE+
Sbjct: 300 KLETVLDGFESVETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKEN 359
Query: 362 SRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
SRFLFIPGP+DAGPSTVLPRCALPKYLTEEL+ IPNAIFSSNPCR+ F
Sbjct: 360 SRFLFIPGPEDAGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKF 408
>DICTYBASE|DDB_G0278367 [details] [associations]
symbol:DDB_G0278367 "putative DNA polymerase epsilon
subunit B" species:44689 "Dictyostelium discoideum" [GO:0006260
"DNA replication" evidence=IEA] [GO:0003887 "DNA-directed DNA
polymerase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR007185 Pfam:PF04042
dictyBase:DDB_G0278367 GO:GO:0005634 GenomeReviews:CM000152_GR
GO:GO:0003677 GO:GO:0006260 EMBL:AAFI02000023 GO:GO:0003887
eggNOG:NOG311342 KO:K02325 RefSeq:XP_642317.1 STRING:Q54Y85
EnsemblProtists:DDB0216321 GeneID:8621523 KEGG:ddi:DDB_G0278367
OMA:EHPLING ProtClustDB:CLSZ2430775 Uniprot:Q54Y85
Length = 676
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 133/416 (31%), Positives = 220/416 (52%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSI 60
M Q +K+I K + G+ ++ DA+ I +NR ++ LK+
Sbjct: 1 MDIQWKKQITKSFSLTGFSIKADAMKCI---INRIKNEGYDITQLI------DNLLKN-- 49
Query: 61 IDKESVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFYQHAG-S 119
+DK + + A++VIDAF P F +DS K F +
Sbjct: 50 LDKSQYLQTIEGCFKLIDTINSSDAI--EKEALKVIDAFNTPLFNFDSNSKQFIKSENFD 107
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP--SFDVVNSEFGSCEISTIQSLVGQT 177
+HG +++K+ LYR R+L + QR R+ +FS P + D + +E+ + I+ + SL+G T
Sbjct: 108 RSLHGSSNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQT--ITPLSSLLGNT 165
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
GR+ V+G ISQ+E+ FY+EDL +V+ID+SKAK G T N+I+ A GE +DG+F
Sbjct: 166 GRKHVLGTISQIEEDQFYIEDLNTNVKIDISKAKFEFGIVTINSIIQASGEF-IDGVFIA 224
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RLADLEKRAANDMFVILSDIWLDN 296
PP E+R ++LK L D FG KK T+ +L EK ++ + LSD+WLD+
Sbjct: 225 DKIQLPPTEERCETLKFLQNIDMFGERPQKK--TMEQLIKYEKEKEDNSILFLSDVWLDS 282
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
E VM +L+ + G++ + P + MGNF HP ++ + L+ F +L +I +P
Sbjct: 283 ERVMERLDYLFGGYK--DCPPFAMILMGNFTEHPL-INGTQYQ-LKKYFNQLAMVIQKYP 338
Query: 357 RLKEHSRFLFIPGPDDAGPS--TVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + ++F+F+PGP D S +LP+ + ++ IP + F++NPCR+ +
Sbjct: 339 NIHQFTQFIFVPGPTDPTGSLLNILPKFPISNVFIKDFISLIPKSTFTTNPCRIRY 394
>ZFIN|ZDB-GENE-020419-16 [details] [associations]
symbol:pole2 "polymerase (DNA directed), epsilon 2"
species:7955 "Danio rerio" [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 ZFIN:ZDB-GENE-020419-16 GO:GO:0005634
GO:GO:0003677 GO:GO:0006261 GO:GO:0003887 KO:K02325 CTD:5427
HOVERGEN:HBG061290 InterPro:IPR024639 Pfam:PF12213 EMBL:AF506228
IPI:IPI00862057 RefSeq:NP_775353.1 UniGene:Dr.77075 GeneID:192320
KEGG:dre:192320 NextBio:20797156 ArrayExpress:Q8JHG8 Uniprot:Q8JHG8
Length = 527
Score = 538 (194.4 bits), Expect = 7.2e-52, P = 7.2e-52
Identities = 130/416 (31%), Positives = 218/416 (52%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSIIDK 63
+ ++K+ K+RG LR ++ +L + + L SS++D
Sbjct: 5 RVKQKVNAGFKMRGLILRPESSRFLLQVLESVSPAELEEVLERVLDSVEKQPLSSSMVD- 63
Query: 64 ESVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS---L 120
VL +H +I AF VP+F + + +K F + + L
Sbjct: 64 ------LCVLEAAVQDCSQSCDETIDH-VFNIIGAFDVPRFIFSTERKKFVPISMTNHPL 116
Query: 121 P-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEF-GSCEISTIQSLV---G 175
P + G+A KA L+R+R+ +L QR R + F+ P E ++ T+++L+
Sbjct: 117 PKLCGQARDKAELFRERYTILQQRTHRHELFTPPVIGSAQDEGRNKFQLKTVEALLCSSA 176
Query: 176 QTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIF 235
+ G V+G+I+QL +G FYLED + +V++D+SKA+ +G +TE+ V+AEG D +F
Sbjct: 177 RLGEVIVLGMITQLREGKFYLEDPSGTVQLDISKAQFHSGLYTESCFVLAEG-WYEDSVF 235
Query: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
V GFPP E + +FFGG + + + +L LE+ + MFV++SD+WL
Sbjct: 236 HVSAFGFPPTEPSSFTRAYFGNVNFFGGPSSTAVKASAKLKQLEEENEDAMFVLVSDVWL 295
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354
D+ EV+ K+ + G+ ++ P+ F+F G+F S P + SLR F L +I
Sbjct: 296 DSVEVLEKIHTMFSGYSALP--PTCFIFCGSFSSAPYGRT--QLRSLRDSFKALADLICE 351
Query: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P + SRF+F+PGP+D GP VLPR L +++TEE Q+ +P ++F++NPCR+ +
Sbjct: 352 FPSIHSSSRFVFVPGPEDPGPGAVLPRPPLAEHITEEFQQRVPLSVFTTNPCRIQY 407
>RGD|1311962 [details] [associations]
symbol:Pole2 "polymerase (DNA directed), epsilon 2, accessory
subunit" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0006261 "DNA-dependent DNA replication" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 RGD:1311962 GO:GO:0005634 GO:GO:0003677
GO:GO:0006261 GO:GO:0003887 GeneTree:ENSGT00390000012435
OrthoDB:EOG4Z8XW9 InterPro:IPR024639 Pfam:PF12213 IPI:IPI00365828
Ensembl:ENSRNOT00000005835 UCSC:RGD:1311962 Uniprot:D4ABZ5
Length = 527
Score = 520 (188.1 bits), Expect = 5.8e-50, P = 5.8e-50
Identities = 124/376 (32%), Positives = 201/376 (53%)
Query: 49 QFEHESSLKSSI--IDKE--SVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKF 104
+ E E +L+ I ++K+ S N + +++ +I AF +P F
Sbjct: 38 ELELEENLEKIIDAVEKQPLSSNMIERSVVEAAVQECSQSVDETIEHIFNIIGAFDIPHF 97
Query: 105 RYDSIKKHFY-----QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVN 159
Y+S +K F HA I G A KA LYR+R+ +L QR R + F+ P
Sbjct: 98 IYNSERKKFLPLSMTNHAAPT-IFGTARDKAELYRERYTILHQRTHRHELFTPPVIGSHP 156
Query: 160 SEFGS-CEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG 215
E GS ++ TI++L+G T G V+G+I+QL++G F+LED +V++DLSK + +G
Sbjct: 157 DESGSKFQLKTIETLLGSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKDQFHSG 216
Query: 216 FFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRL 274
+TE V+AEG D +F GFPP E + +FFGG + + +L
Sbjct: 217 LYTEACFVLAEG-CFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKASAKL 275
Query: 275 ADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLS 334
LE+ + MFVI+SD+WLD +V+ KL V+ G+ P+ F+ GNF S P +
Sbjct: 276 RQLEEENKDAMFVIVSDVWLDQVQVLEKLHVMFSGYSPAP--PTCFILCGNFSSAPYGKN 333
Query: 335 FHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQK 394
+L+ L +I +P + + SRF+F+PGP+D G ++LPR L + +T+E ++
Sbjct: 334 --QVQALKDSLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQ 391
Query: 395 YIPNAIFSSNPCRLNF 410
+P ++F++NPCR+ +
Sbjct: 392 RVPFSVFTTNPCRIQY 407
>UNIPROTKB|Q5ZKQ6 [details] [associations]
symbol:POLE2 "DNA polymerase epsilon subunit 2"
species:9031 "Gallus gallus" [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
[GO:0006281 "DNA repair" evidence=TAS] InterPro:IPR007185
InterPro:IPR016266 Pfam:PF04042 PIRSF:PIRSF000799 GO:GO:0005634
GO:GO:0003677 GO:GO:0006281 GO:GO:0006261 Reactome:REACT_115612
GO:GO:0003887 eggNOG:NOG311342 KO:K02325
GeneTree:ENSGT00390000012435 CTD:5427 HOGENOM:HOG000265254
HOVERGEN:HBG061290 OrthoDB:EOG4Z8XW9 InterPro:IPR024639
Pfam:PF12213 OMA:PNHFVKT EMBL:AJ720028 IPI:IPI00582824
RefSeq:NP_001006493.1 UniGene:Gga.1227 ProteinModelPortal:Q5ZKQ6
SMR:Q5ZKQ6 STRING:Q5ZKQ6 Ensembl:ENSGALT00000019982 GeneID:423567
KEGG:gga:423567 InParanoid:Q5ZKQ6 NextBio:20826022
ArrayExpress:Q5ZKQ6 Uniprot:Q5ZKQ6
Length = 527
Score = 519 (187.8 bits), Expect = 7.4e-50, P = 7.4e-50
Identities = 116/330 (35%), Positives = 192/330 (58%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHA-GSLPI---HGEASAKAALYRDRFLLLFQRVSR 146
+ +I AF +P++ Y+ +K F + +LP+ G A KA L+R+R+ +L QR R
Sbjct: 84 NVFNIIGAFDIPRYIYNPDRKRFVPLSMTNLPVPNLFGTARDKAELFRERYSILQQRTHR 143
Query: 147 DQHFSRPSFDVVNSEFGSC--EISTIQSLVGQTGR-RWV--MGVISQLEDGHFYLEDLAA 201
+ F+ P+ V++ + ++ T+++L+G T + R V +G+I+QL++G ++LED
Sbjct: 144 HELFT-PAAVVIHPDDNRSKFQLKTVETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTG 202
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
V++DLSKA+ +G +TE+ V+AEG D +F V GFPP E + +FF
Sbjct: 203 VVQLDLSKAQFHSGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFF 261
Query: 262 GG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLF 320
GG + + + +L LE + MFV LSD+WLD EV+ KL + G+ S P+ F
Sbjct: 262 GGPSSASVKASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCF 319
Query: 321 VFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLP 380
F GNF S P + SL+ L +I +P + + SRF+F+PGP+D GP +VLP
Sbjct: 320 FFCGNFSSAPYGKN--QIQSLKGSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGSVLP 377
Query: 381 RCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
R L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 378 RPPLAENITQEFRQLVPFSVFTTNPCRVQY 407
>UNIPROTKB|A7YWS7 [details] [associations]
symbol:POLE2 "DNA polymerase epsilon subunit 2"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IEA]
InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 GO:GO:0003677 GO:GO:0006261 GO:GO:0008622
GO:GO:0003887 eggNOG:NOG311342 KO:K02325 EMBL:BC134762
IPI:IPI00868537 RefSeq:NP_001098853.1 UniGene:Bt.28135
ProteinModelPortal:A7YWS7 SMR:A7YWS7 STRING:A7YWS7 PRIDE:A7YWS7
GeneID:518653 KEGG:bta:518653 CTD:5427 HOGENOM:HOG000265254
HOVERGEN:HBG061290 InParanoid:A7YWS7 OrthoDB:EOG4Z8XW9
NextBio:20872700 InterPro:IPR024639 Pfam:PF12213 Uniprot:A7YWS7
Length = 527
Score = 517 (187.1 bits), Expect = 1.2e-49, P = 1.2e-49
Identities = 130/418 (31%), Positives = 211/418 (50%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEIELEDALEKIIDAVE---KQPLSSNMIE 63
Query: 63 KESVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
+ V Q +H +I AF +P+F Y+S +K F H
Sbjct: 64 RSVVEAAVQECSQSVDETI-------DH-IFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 116 AP-NLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGS 174
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED ++++DLSKA+ +G +TE+ V+AEG D
Sbjct: 175 TSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFEDQ 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDI 292
+F V GFPP E + +FFGG + + +L LE + MFV +SD+
Sbjct: 234 VFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 294 WLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAPYGKN--QVQALKDSLKTLADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 350 CGYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQY 407
>UNIPROTKB|F1MKI8 [details] [associations]
symbol:POLE2 "DNA polymerase epsilon subunit 2"
species:9913 "Bos taurus" [GO:0008622 "epsilon DNA polymerase
complex" evidence=IEA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 GO:GO:0005634 GO:GO:0003677 GO:GO:0006261
GO:GO:0003887 GeneTree:ENSGT00390000012435 IPI:IPI00868537
UniGene:Bt.28135 InterPro:IPR024639 Pfam:PF12213 OMA:PNHFVKT
EMBL:DAAA02028679 Ensembl:ENSBTAT00000006488 Uniprot:F1MKI8
Length = 527
Score = 516 (186.7 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 130/418 (31%), Positives = 211/418 (50%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEIELEDALEKIIDAVE---KQPLSSNMIE 63
Query: 63 KESVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
+ V Q +H +I AF +P+F Y+S +K F H
Sbjct: 64 RSVVEAAVQECSQSVDETI-------DH-IFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 116 AP-NLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGS 174
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED ++++DLSKA+ +G +TE+ V+AEG D
Sbjct: 175 TSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFEDQ 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDI 292
+F V GFPP E + +FFGG + + +L LE + MFV +SD+
Sbjct: 234 VFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 294 WLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAPYGKN--QVQALKDSLKTLADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 350 CEYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQY 407
>UNIPROTKB|E2RCT9 [details] [associations]
symbol:DNAAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006261 "DNA-dependent DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR007185 InterPro:IPR016266
Pfam:PF04042 PIRSF:PIRSF000799 GO:GO:0005634 GO:GO:0003677
GO:GO:0006261 GO:GO:0003887 KO:K02325 CTD:5427 InterPro:IPR024639
Pfam:PF12213 GeneTree:ENSGT00510000048466 EMBL:AAEX03005718
EMBL:AAEX03005717 RefSeq:XP_851216.1 Ensembl:ENSCAFT00000022550
GeneID:608973 KEGG:cfa:608973 Uniprot:E2RCT9
Length = 527
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 128/415 (30%), Positives = 207/415 (49%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSIIDKES 65
R ++ K+RG LR +A+ + + + L S++I++
Sbjct: 7 RSRMVSAFKLRGLLLRGEAIKYLTEALESISEVELEDALEKIIDAVEKQPLSSNMIERSV 66
Query: 66 VNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFY-----QHAGSL 120
V Q H +I AF +P+F Y S +K F H
Sbjct: 67 VEAAVQECSQLVDETI-------EH-IFNIIGAFDIPRFVYSSERKKFLPLLMTNHPAP- 117
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT-- 177
+ G A KA L+ +R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 118 NLFGTARDKAELFLERYTILHQRTHRHELFTPPVIGSHPDETGSKFQLKTIETLLGSTAK 177
Query: 178 -GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQ 236
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +F
Sbjct: 178 IGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDRVFH 236
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLD 295
V GFPP E + +FFGG + + +L LE+ + MFV +SD+WLD
Sbjct: 237 VNAFGFPPTEPSSTTRAYYGNVNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVWLD 296
Query: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355
EV+ KL + G+ P+ F+ GNF S P S +L+ L +I +
Sbjct: 297 QGEVLRKLHTMFSGYSPAP--PTCFIMCGNFSSAPYGKS--QIQALKDSLKTLADIICEY 352
Query: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P + + SRF+FIPGP+D G ++LPR + + +T E ++ +P ++F++NPCR+ +
Sbjct: 353 PNIHQSSRFVFIPGPEDPGFGSILPRPPIAESITNEFRQRVPFSVFTTNPCRIQY 407
>UNIPROTKB|J9PBE8 [details] [associations]
symbol:DNAAF2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006261 "DNA-dependent DNA replication"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR007185 InterPro:IPR016266
Pfam:PF04042 PIRSF:PIRSF000799 GO:GO:0005634 GO:GO:0003677
GO:GO:0006261 GO:GO:0003887 InterPro:IPR024639 Pfam:PF12213
OMA:PNHFVKT GeneTree:ENSGT00510000048466 EMBL:AAEX03005718
EMBL:AAEX03005717 Ensembl:ENSCAFT00000044832 Uniprot:J9PBE8
Length = 547
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 128/415 (30%), Positives = 207/415 (49%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSIIDKES 65
R ++ K+RG LR +A+ + + + L S++I++
Sbjct: 7 RSRMVSAFKLRGLLLRGEAIKYLTEALESISEVELEDALEKIIDAVEKQPLSSNMIERSV 66
Query: 66 VNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFY-----QHAGSL 120
V Q H +I AF +P+F Y S +K F H
Sbjct: 67 VEAAVQECSQLVDETI-------EH-IFNIIGAFDIPRFVYSSERKKFLPLLMTNHPAP- 117
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT-- 177
+ G A KA L+ +R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 118 NLFGTARDKAELFLERYTILHQRTHRHELFTPPVIGSHPDETGSKFQLKTIETLLGSTAK 177
Query: 178 -GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQ 236
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +F
Sbjct: 178 IGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDRVFH 236
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLD 295
V GFPP E + +FFGG + + +L LE+ + MFV +SD+WLD
Sbjct: 237 VNAFGFPPTEPSSTTRAYYGNVNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVWLD 296
Query: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355
EV+ KL + G+ P+ F+ GNF S P S +L+ L +I +
Sbjct: 297 QGEVLRKLHTMFSGYSPAP--PTCFIMCGNFSSAPYGKS--QIQALKDSLKTLADIICEY 352
Query: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P + + SRF+FIPGP+D G ++LPR + + +T E ++ +P ++F++NPCR+ +
Sbjct: 353 PNIHQSSRFVFIPGPEDPGFGSILPRPPIAESITNEFRQRVPFSVFTTNPCRIQY 407
>UNIPROTKB|F1SHZ5 [details] [associations]
symbol:POLE2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008622 "epsilon DNA polymerase complex" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR007185
InterPro:IPR016266 Pfam:PF04042 PIRSF:PIRSF000799 GO:GO:0005634
GO:GO:0003677 GO:GO:0006261 GO:GO:0003887 KO:K02325
GeneTree:ENSGT00390000012435 InterPro:IPR024639 Pfam:PF12213
OMA:PNHFVKT EMBL:CU633502 EMBL:CU633539 RefSeq:XP_003480516.1
Ensembl:ENSSSCT00000005524 GeneID:100521651 KEGG:ssc:100521651
Uniprot:F1SHZ5
Length = 527
Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
Identities = 128/414 (30%), Positives = 206/414 (49%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPXXXXXXXXXXXXQFEHESSLKSSIIDKES 65
R + K+RG LR +A+ + + + L S++I+K
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTGALQSINEVELEDALEKIIDAVEKQPLSSNMIEKSV 66
Query: 66 VNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKFRYDSIKKHFY---QHAGSLP- 121
V Q H +I AF +P+F Y+S +K F + P
Sbjct: 67 VEAAVQECSQSVDETI-------EH-IFNIIGAFDIPRFVYNSERKKFLPLLMTSHPAPN 118
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT--- 177
+ G A KA L+R+R+ +L QR R + F+ P E GS ++ T+++L+G T
Sbjct: 119 LFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTVETLLGSTSKI 178
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
G V+G+I+QL++G F+LED +V +DLSKA+ +G +TE+ V+AEG D IF V
Sbjct: 179 GDVIVLGMITQLKEGKFFLEDPTGTVPLDLSKAQFHSGLYTESCFVLAEG-WFEDQIFHV 237
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
GFPP E + +FFGG + + +L LE + MFV +SD+WLD
Sbjct: 238 NAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDVWLDQ 297
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
EV+ KL + G+ P+ F+ GNF S P + +L+ L +I +P
Sbjct: 298 VEVLEKLHTMFSGYSPAP--PTCFILCGNFSSTPYGKN--QVQALKDSLKTLADIICEYP 353
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 354 NIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPYSVFTTNPCRIQY 407
>UNIPROTKB|P56282 [details] [associations]
symbol:POLE2 "DNA polymerase epsilon subunit 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=IEA]
[GO:0008622 "epsilon DNA polymerase complex" evidence=IDA]
[GO:0006260 "DNA replication" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000216 "M/G1
transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0000722 "telomere
maintenance via recombination" evidence=TAS] [GO:0000723 "telomere
maintenance" evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006270 "DNA replication initiation" evidence=TAS] [GO:0006281
"DNA repair" evidence=TAS] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=TAS] [GO:0006289
"nucleotide-excision repair" evidence=TAS] [GO:0006297
"nucleotide-excision repair, DNA gap filling" evidence=TAS]
[GO:0032201 "telomere maintenance via semi-conservative
replication" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Reactome:REACT_216
InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 Reactome:REACT_115566 GO:GO:0005654
Reactome:REACT_21300 GO:GO:0003677 GO:GO:0000082 GO:GO:0006270
GO:GO:0000216 GO:GO:0000084 GO:GO:0000722 Reactome:REACT_383
GO:GO:0006283 GO:GO:0008622 GO:GO:0003887 GO:GO:0032201
GO:GO:0006297 eggNOG:NOG311342 KO:K02325 CTD:5427
HOGENOM:HOG000265254 HOVERGEN:HBG061290 OrthoDB:EOG4Z8XW9
InterPro:IPR024639 Pfam:PF12213 OMA:PNHFVKT EMBL:AF025840
EMBL:AF036899 EMBL:AF387034 EMBL:AF387021 EMBL:AF387022
EMBL:AF387023 EMBL:AF387024 EMBL:AF387025 EMBL:AF387026
EMBL:AF387027 EMBL:AF387028 EMBL:AF387029 EMBL:AF387030
EMBL:AF387031 EMBL:AF387032 EMBL:AF387033 EMBL:EF506887
EMBL:AK293163 EMBL:AL139099 EMBL:AL591767 EMBL:BC112962
EMBL:BC126218 EMBL:BC126220 IPI:IPI00008829 IPI:IPI00980278
RefSeq:NP_001184259.1 RefSeq:NP_001184260.1 RefSeq:NP_002683.2
UniGene:Hs.162777 PDB:2V6Z PDBsum:2V6Z ProteinModelPortal:P56282
SMR:P56282 IntAct:P56282 MINT:MINT-1377461 STRING:P56282
PhosphoSite:P56282 DMDM:3915676 PaxDb:P56282 PRIDE:P56282
DNASU:5427 Ensembl:ENST00000216367 Ensembl:ENST00000539565
Ensembl:ENST00000554396 GeneID:5427 KEGG:hsa:5427 UCSC:uc001wwu.3
GeneCards:GC14M050110 HGNC:HGNC:9178 HPA:HPA027555 MIM:602670
neXtProt:NX_P56282 PharmGKB:PA278 InParanoid:P56282
EvolutionaryTrace:P56282 GenomeRNAi:5427 NextBio:20997
ArrayExpress:P56282 Bgee:P56282 CleanEx:HS_POLE2
Genevestigator:P56282 GermOnline:ENSG00000100479 Uniprot:P56282
Length = 527
Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
Identities = 121/376 (32%), Positives = 199/376 (52%)
Query: 49 QFEHESSLKSSI--IDKE--SVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKF 104
+ E E L+ I ++K+ S N + +++ +I AF +P+F
Sbjct: 38 ELELEDKLEKIINAVEKQPLSSNMIERSVVEAAVQECSQSVDETIEHVFNIIGAFDIPRF 97
Query: 105 RYDSIKKHFY-----QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVN 159
Y+S +K F H + G KA ++R+R+ +L QR R + F+ P
Sbjct: 98 VYNSERKKFLPLLMTNHPAP-NLFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHP 156
Query: 160 SEFGS-CEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG 215
E GS ++ TI++L+G T G V+G+I+QL++G F+LED +V++DLSKA+ +G
Sbjct: 157 DESGSKFQLKTIETLLGSTTKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG 216
Query: 216 FFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRL 274
+TE V+AEG D +F V GFPP E + +FFGG + + +L
Sbjct: 217 LYTEACFVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKL 275
Query: 275 ADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLS 334
LE+ + MFV LSD+WLD EV+ KL ++ G+ P+ F+ GNF S P +
Sbjct: 276 KQLEEENKDAMFVFLSDVWLDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAPYGKN 333
Query: 335 FHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQK 394
+L+ L +I +P + + SRF+F+PGP+D G ++LPR L + +T E ++
Sbjct: 334 --QVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQ 391
Query: 395 YIPNAIFSSNPCRLNF 410
+P ++F++NPCR+ +
Sbjct: 392 RVPFSVFTTNPCRIQY 407
>MGI|MGI:1197514 [details] [associations]
symbol:Pole2 "polymerase (DNA directed), epsilon 2 (p59
subunit)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISO] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 MGI:MGI:1197514 GO:GO:0003677 GO:GO:0006261
GO:GO:0008622 GO:GO:0003887 eggNOG:NOG311342 KO:K02325
GeneTree:ENSGT00390000012435 CTD:5427 HOGENOM:HOG000265254
HOVERGEN:HBG061290 OrthoDB:EOG4Z8XW9 InterPro:IPR024639
Pfam:PF12213 OMA:PNHFVKT EMBL:AK077592 EMBL:BC063772 EMBL:AF036898
IPI:IPI00420320 RefSeq:NP_035263.1 UniGene:Mm.9199
ProteinModelPortal:O54956 SMR:O54956 STRING:O54956
PhosphoSite:O54956 PRIDE:O54956 Ensembl:ENSMUST00000021359
GeneID:18974 KEGG:mmu:18974 UCSC:uc007nrv.1 InParanoid:O54956
NextBio:295332 Bgee:O54956 Genevestigator:O54956
GermOnline:ENSMUSG00000020974 Uniprot:O54956
Length = 527
Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
Identities = 123/376 (32%), Positives = 199/376 (52%)
Query: 49 QFEHESSLKSSI--IDKE--SVNRVTSVLLQXXXXXXXXXXXXXNHSAIRVIDAFLVPKF 104
+ E E +L I ++K+ S N + +++ +I AF +P+F
Sbjct: 38 ELELEENLGKIIDAVEKQPLSSNMIERSVVEAAVQECSQSMDETIEHVFNIIGAFDIPRF 97
Query: 105 RYDSIKKHFY-----QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVN 159
Y+S +K F HA + G A KA LY +R+ +L QR R + F+ P
Sbjct: 98 IYNSERKKFLPLSMTNHAAPT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHL 156
Query: 160 SEFGS-CEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG 215
E GS ++ TI++L+G T G V+G+I+QL++G F+LED +V++DLSKA+ +G
Sbjct: 157 EESGSKFQLKTIETLLGSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSG 216
Query: 216 FFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RL 274
+TE V+AEG D +F GFPP E + +FFGG + T +L
Sbjct: 217 LYTEACFVLAEG-WFEDQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKL 275
Query: 275 ADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLS 334
LE + MFVI+SD+WLD +V+ K V+ G+ P+ F+ GNF S P +
Sbjct: 276 RQLEDENKDAMFVIVSDVWLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAPYGKN 333
Query: 335 FHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQK 394
+L+ L +I +P + + SRF+F+PGP+D G ++LPR L + +T+E ++
Sbjct: 334 --QVQALKDSLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQ 391
Query: 395 YIPNAIFSSNPCRLNF 410
+P ++F++NPCR+ +
Sbjct: 392 RVPFSVFTTNPCRIQY 407
>POMBASE|SPBP8B7.14c [details] [associations]
symbol:dpb2 "DNA polymerase epsilon catalytic subunit B,
Dpb2" species:4896 "Schizosaccharomyces pombe" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006270 "DNA replication
initiation" evidence=IMP] [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISO] [GO:0031261 "DNA replication preinitiation
complex" evidence=IC] [GO:0003887 "DNA-directed DNA polymerase
activity" evidence=IMP] InterPro:IPR007185 InterPro:IPR016266
Pfam:PF04042 PIRSF:PIRSF000799 PomBase:SPBP8B7.14c GO:GO:0005829
GO:GO:0003677 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0031261
GO:GO:0006270 GO:GO:0008622 GO:GO:0003887 PIR:T40808
RefSeq:NP_596521.1 IntAct:O94263 STRING:O94263
EnsemblFungi:SPBP8B7.14c.1 GeneID:2541347 KEGG:spo:SPBP8B7.14c
eggNOG:NOG311342 KO:K02325 OMA:STEQWEC OrthoDB:EOG4T4H3M
NextBio:20802456 Uniprot:O94263
Length = 594
Score = 489 (177.2 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 110/329 (33%), Positives = 185/329 (56%)
Query: 89 NHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQ 148
N RV+DAF +PKF+YDS +K F S + ASA + RF +++ R+ R++
Sbjct: 135 NEKYFRVLDAFKMPKFKYDSSRKVFVLSKQSPTLMASASACTDMLNRRFNVVYSRILRNE 194
Query: 149 HFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDL 207
F PSF S+ G+ +++ I++L+G+ G +++ G+++ DG +LEDL + V++D+
Sbjct: 195 SFQTPSFSGSFSQTGTYQLTPIRNLLGRAGNTFLLFGLLTIAPDGTLWLEDLDSQVQLDV 254
Query: 208 SKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLK 267
S+A+ G F +V+ G+ L G+F V G PP+E RD SLK L D G
Sbjct: 255 SQAEQGFGLFCPGCLVLVNGQFLSSGLFLVFELGHPPIERRDASLKALNNLDILGLNMDA 314
Query: 268 KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
K+ L L E+ + FV +S++ LDN + LE + +ES E VP + G+F
Sbjct: 315 KQLAL-LRHAEQAYQSQAFVCISEVHLDNHQTFYALEKIFQKYESSEAVPFCIILCGSFM 373
Query: 328 SHPCNLSFH-SFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS---TVLPR 381
S +FH S SS++ + F KL + P++ E ++F+F+PGP+D + +++P+
Sbjct: 374 SS----AFHNSGSSIQYKEGFNKLAASLEKFPKICEKTKFIFVPGPNDPWTTNGISLMPK 429
Query: 382 CALPKYLTEELQKYIPNAIFSSNPCRLNF 410
++P + +Q+ + IF+SNPCR+ F
Sbjct: 430 HSIPLHFVNRIQRVCKHTIFASNPCRIIF 458
Score = 37 (18.1 bits), Expect = 8.7e-49, Sum P(2) = 8.7e-49
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 16 RGYGLRM--DALDEILSFVNR 34
R Y L + D+L E+ SFV++
Sbjct: 35 RKYDLNINRDSLQELASFVSK 55
>UNIPROTKB|E1C2T8 [details] [associations]
symbol:POLE2 "DNA polymerase epsilon subunit 2"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003887 "DNA-directed DNA polymerase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006261
"DNA-dependent DNA replication" evidence=IEA] InterPro:IPR007185
InterPro:IPR016266 Pfam:PF04042 PIRSF:PIRSF000799 GO:GO:0005634
GO:GO:0003677 GO:GO:0006261 GO:GO:0003887
GeneTree:ENSGT00390000012435 InterPro:IPR024639 Pfam:PF12213
EMBL:AADN02004024 IPI:IPI00603016 Ensembl:ENSGALT00000019983
ArrayExpress:E1C2T8 Uniprot:E1C2T8
Length = 527
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 113/330 (34%), Positives = 188/330 (56%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHA-GSLPI---HGEASAKAALYRDRFLLLFQRVSR 146
+ +I AF +P++ Y+ +K F + +LP+ G A KA L+R+R+ +L QR R
Sbjct: 84 NVFNIIGAFDIPRYIYNPDRKRFVPLSMTNLPVPNLFGTARDKAELFRERYSILQQRTHR 143
Query: 147 DQHFSRPSFDVVNSEFGSC--EISTIQSLVGQTGR-RWV--MGVISQLEDGHFYLEDLAA 201
+ F+ P+ V++ + ++ T+++L+G T + R V +G+I+QL++G ++LED
Sbjct: 144 HELFT-PAAVVIHPDDNRSKFQLKTVETLLGNTAKVREVIVLGMITQLKEGKYFLEDPTG 202
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
V++DL +G +TE+ V+AEG D +F V GFPP E + +FF
Sbjct: 203 VVQLDLISLLFHSGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFF 261
Query: 262 GG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLF 320
GG + + + +L LE + MFV LSD+WLD EV+ KL + G+ S P+ F
Sbjct: 262 GGPSSASVKASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCF 319
Query: 321 VFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLP 380
F GNF S P + SL+ L +I +P + + SRF+F+PGP+D GP +VLP
Sbjct: 320 FFCGNFSSAPYGKN--QIQSLKGSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGSVLP 377
Query: 381 RCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
R L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 378 RPPLAENITQEFRQLVPFSVFTTNPCRVQY 407
>FB|FBgn0035644 [details] [associations]
symbol:Pole2 "Pole2" species:7227 "Drosophila melanogaster"
[GO:0008622 "epsilon DNA polymerase complex" evidence=ISS;NAS]
[GO:0003887 "DNA-directed DNA polymerase activity" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006261 "DNA-dependent
DNA replication" evidence=IEA;NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] InterPro:IPR007185
InterPro:IPR016266 Pfam:PF04042 PIRSF:PIRSF000799 GO:GO:0005634
EMBL:AE014296 GO:GO:0003677 GO:GO:0006974 GO:GO:0006261
GO:GO:0003887 KO:K02325 GeneTree:ENSGT00390000012435 CTD:5427
InterPro:IPR024639 Pfam:PF12213 OMA:PNHFVKT FlyBase:FBgn0035644
RefSeq:NP_647995.1 UniGene:Dm.858 ProteinModelPortal:Q9VRQ7
SMR:Q9VRQ7 IntAct:Q9VRQ7 MINT:MINT-981579 STRING:Q9VRQ7
PRIDE:Q9VRQ7 EnsemblMetazoa:FBtr0077081 GeneID:38661
KEGG:dme:Dmel_CG10489 UCSC:CG10489-RA InParanoid:Q9VRQ7
PhylomeDB:Q9VRQ7 GenomeRNAi:38661 NextBio:809771
ArrayExpress:Q9VRQ7 Bgee:Q9VRQ7 Uniprot:Q9VRQ7
Length = 525
Score = 346 (126.9 bits), Expect = 2.6e-31, P = 2.6e-31
Identities = 98/323 (30%), Positives = 159/323 (49%)
Query: 95 VIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS 154
+IDAF VP+FRY+ K F + K+ + R+ +L Q+ R F+ P+
Sbjct: 90 LIDAFTVPRFRYNQRIKKFELDTQPRQLLTAPRMKSDYMQQRYAMLLQKTLRHDLFA-PA 148
Query: 155 F--DVVNSEFGS--CEISTIQSLVGQTGRRW--VMGVISQLEDGHFYLEDLAASVEIDLS 208
D V +E + ++ ++L+ + + V+G+++QL++G FY+ED V++DL+
Sbjct: 149 VIQDGVGAEAQAKKFKLQFAENLLATSAMKEAVVLGLLTQLKEGKFYVEDPTGCVQLDLT 208
Query: 209 KAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK 268
A+ GFF E V+AEG +G+ +V GFPP E + S + +GG + K
Sbjct: 209 GARFHAGFFCEGCFVLAEGNYN-NGVLKVDGLGFPPAEPANSSRAFFGTANTWGGESAKL 267
Query: 269 -EDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
+ + L +LE+ V LSD+ LD VM KL + G++S P V MG F
Sbjct: 268 LKYSAGLQELERTNTETTIVFLSDVRLDLPVVMEKLRQLFVGYDSCP--PQAIVLMGPFT 325
Query: 328 SHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKY 387
+ N H LR LG + A +LK+ + + +P +D +LPR +P+
Sbjct: 326 ASTRN---HH--ELRHHLDALGGLAAGCEQLKKQTDLILVPSSEDPTAPNILPRAPIPEC 380
Query: 388 LTEELQKYIPNAIFSSNPCRLNF 410
L L K P ++NPCRL +
Sbjct: 381 LAAGLLKAWPRTQLATNPCRLQY 403
>WB|WBGene00017237 [details] [associations]
symbol:pole-2 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA] [GO:0006260 "DNA
replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006261 "DNA-dependent DNA replication" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR007185 InterPro:IPR016266 Pfam:PF04042
PIRSF:PIRSF000799 GO:GO:0005634 GO:GO:0009792 GO:GO:0002009
GO:GO:0040007 GO:GO:0002119 GO:GO:0003677 GO:GO:0010171
GO:GO:0040011 GO:GO:0006261 GO:GO:0040035 GO:GO:0003887
eggNOG:NOG311342 KO:K02325 GeneTree:ENSGT00390000012435
InterPro:IPR024639 Pfam:PF12213 EMBL:FO080903 PIR:T29484
RefSeq:NP_501489.2 ProteinModelPortal:Q19196 STRING:Q19196
PaxDb:Q19196 EnsemblMetazoa:F08B4.5.2 GeneID:177673
KEGG:cel:CELE_F08B4.5 UCSC:F08B4.5 CTD:177673 WormBase:F08B4.5
HOGENOM:HOG000021674 InParanoid:Q19196 OMA:PNHFVKT NextBio:897872
Uniprot:Q19196
Length = 534
Score = 306 (112.8 bits), Expect = 9.9e-27, P = 9.9e-27
Identities = 97/328 (29%), Positives = 163/328 (49%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
+ V DAF + + +D+ + + ++S+ + R RF ++ QR R
Sbjct: 90 LNVFDAFSLQPYDFDADLRKMVLRKEKTSLAADSSSFSHAARQRFFIVKQRAMR------ 143
Query: 153 PSFDVVNSEFGSCEI---ST--IQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDL 207
+ N +F +CEI ST +QS+V V+G+++Q + +++EDL+ SVE++
Sbjct: 144 -CASLKNFKFTTCEILGSSTKHLQSVV-------VLGMLTQQKADCYHIEDLSGSVEVEF 195
Query: 208 SK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYD-FFGGG- 264
+ K F E++I + EG + + V P+E + + K L+ + +FGG
Sbjct: 196 KEDTKFHHALFHEHSIAIFEGTF-ENSVLTVNEVAMVPVESAEVTRKELSSNENWFGGDD 254
Query: 265 --TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVF 322
+ D LR A L K+ + V LSD++LD+++VM + +L G++ + P VF
Sbjct: 255 KIAFRCSDRLRSA-LAKQEDTSL-VFLSDVFLDDKKVMKAVFKLLQGYK--DQPPVAIVF 310
Query: 323 MGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRC 382
GNFCS P + L F L + + E ++F+F+PGPDD TVLPR
Sbjct: 311 CGNFCSRPRQTD--TIDLLDRGFRWLANQLTPLRKDYEKTQFIFVPGPDDPFVDTVLPRP 368
Query: 383 ALPKYLTEELQKYIPNAIFSSNPCRLNF 410
LP L + + I + F+SNPCR+ F
Sbjct: 369 HLPSLLFKHISPII-SCTFASNPCRIQF 395
>ASPGD|ASPL0000068420 [details] [associations]
symbol:AN7439 species:162425 "Emericella nidulans"
[GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IEA] [GO:0045005 "maintenance of fidelity involved in
DNA-dependent DNA replication" evidence=IEA] [GO:0042276
"error-prone translesion synthesis" evidence=IEA] [GO:0006270 "DNA
replication initiation" evidence=IEA] InterPro:IPR007185
Pfam:PF04042 GO:GO:0003677 GO:GO:0006260 EMBL:AACD01000129
EMBL:BN001304 GO:GO:0003887 eggNOG:NOG311342 KO:K02325
OrthoDB:EOG4T4H3M OMA:GSIEYKE RefSeq:XP_680708.1 STRING:Q5AW91
EnsemblFungi:CADANIAT00000530 GeneID:2869644 KEGG:ani:AN7439.2
HOGENOM:HOG000162438 Uniprot:Q5AW91
Length = 743
Score = 151 (58.2 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 48/156 (30%), Positives = 83/156 (53%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF-- 150
I+VI AF P+ Y++ KK+F + E S K AL+RDR+ L+ QR+ R++ F
Sbjct: 182 IKVIGAFDTPRLAYNAEKKNFEVTKIKPSLFPEPSHKTALFRDRYNLVHQRLLRNELFQV 241
Query: 151 -----SRPSFDVVNSEFG--SC-EISTIQSLVGQTGR-RWVMGVISQLEDGHFYLEDLAA 201
S P+ +S F C +++ + +L+G++G ++G++S G L DL
Sbjct: 242 PLASASMPTLQRSSSTFARSQCYKLTPVANLLGRSGTSHLLLGLLSISPTGELSLTDLTG 301
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGE-MLVDGIFQ 236
S+ +DLS A++ + + G +LVDGI++
Sbjct: 302 SIVLDLSHARL----IPKGGAWLTPGMFVLVDGIYE 333
Score = 124 (48.7 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 36/124 (29%), Positives = 60/124 (48%)
Query: 287 VILSDIWLDNEEVMGKLEVVLDGFE--SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
VI+ ++ LDN + M L V + +V+ P LFV +GNF S+ +
Sbjct: 433 VIMGEVNLDNMKTMDALRKVFSLYNDSAVQERPLLFVLVGNFVQKAIINGGGQGGSIEYK 492
Query: 345 --FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKY 395
F L +++ P L + S F+F+PG +D AG S+ +PR A+P T +++
Sbjct: 493 ECFDMLALVLSDFPSLLQRSTFIFVPGDNDPWSSSFSAGASSTIPRYAIPNLFTSRVKRA 552
Query: 396 IPNA 399
+A
Sbjct: 553 FASA 556
Score = 42 (19.8 bits), Expect = 3.8e-07, Sum P(2) = 3.8e-07
Identities = 14/48 (29%), Positives = 21/48 (43%)
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVE-VVPSLFVFMGNFCSHPC 331
MFV++ I+ + E V G L G + + FV + C PC
Sbjct: 324 MFVLVDGIYEEEENVRGS---TLGGNSGIGGAIGGKFVGV-TICGPPC 367
Score = 41 (19.5 bits), Expect = 1.1e-15, Sum P(3) = 1.1e-15
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 231 VDGIFQVIT-CGFPPLEDRDQSL 252
+ G F +T CG PP E R+ SL
Sbjct: 353 IGGKFVGVTICG-PPCERRETSL 374
>SGD|S000006379 [details] [associations]
symbol:DPB2 "Second largest subunit of DNA polymerase II (DNA
polymerase epsilon)," species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=IEA;IDA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA;IDA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0008622 "epsilon DNA polymerase complex"
evidence=IDA] [GO:0006261 "DNA-dependent DNA replication"
evidence=IDA] [GO:0003697 "single-stranded DNA binding"
evidence=IDA] [GO:0045005 "maintenance of fidelity involved in
DNA-dependent DNA replication" evidence=IMP] [GO:0042276
"error-prone translesion synthesis" evidence=IMP;IDA] [GO:0070868
"heterochromatin organization involved in chromatin silencing"
evidence=IC] [GO:0016779 "nucleotidyltransferase activity"
evidence=IEA] InterPro:IPR007185 Pfam:PF04042 SGD:S000006379
GO:GO:0005737 GO:GO:0003677 GO:GO:0007049 EMBL:BK006949
GO:GO:0070868 EMBL:U25842 GO:GO:0008622 GO:GO:0003887 GO:GO:0042276
eggNOG:NOG311342 KO:K02325 OrthoDB:EOG4T4H3M EMBL:M61710 PIR:S59833
RefSeq:NP_015501.2 ProteinModelPortal:P24482 DIP:DIP-2533N
IntAct:P24482 MINT:MINT-532205 STRING:P24482 PaxDb:P24482
EnsemblFungi:YPR175W GeneID:856305 KEGG:sce:YPR175W CYGD:YPR175w
GeneTree:ENSGT00390000012435 HOGENOM:HOG000246706 OMA:GSIEYKE
NextBio:981670 Genevestigator:P24482 GermOnline:YPR175W
GO:GO:0045005 Uniprot:P24482
Length = 689
Score = 218 (81.8 bits), Expect = 6.7e-15, P = 6.7e-15
Identities = 76/262 (29%), Positives = 132/262 (50%)
Query: 135 DRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGH 193
D F L VS S + +S S I+ I++L+G+ + +++ G++++ G+
Sbjct: 239 DMFNPLSSMVSLQNELSNTNRQQQSS---SMSITPIKNLLGRDAQNFLLLGLLNKNFKGN 295
Query: 194 FYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFPPLEDRDQS 251
+ LED + SVEID+S+ T G ++ +V+ EG V F V + PP E R+ +
Sbjct: 296 WSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLPPGERREIT 355
Query: 252 LKLLAGYDFFG--G-------GTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMG 301
L+ + D G G L K+ +RL LEK + FVIL ++++LD+ ++M
Sbjct: 356 LETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMT 415
Query: 302 KLEVVLDGFESVEVVPSLFVFMGNFCSHP--CNLSFHSFSS---LRLQFGKLGQMIAAHP 356
L +L + P+L ++ G+F S P ++S + SS + F L +++
Sbjct: 416 ALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFD 473
Query: 357 RLKEHSRFLFIPGPDDAGPSTV 378
L E++ +FIPGP+D S V
Sbjct: 474 NLTENTTMIFIPGPNDLWGSMV 495
Score = 178 (67.7 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 49/159 (30%), Positives = 85/159 (53%)
Query: 266 LKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMG 324
L K+ +RL LEK + FVIL ++++LD+ ++M L +L + P+L ++ G
Sbjct: 379 LDKDLKIRLHLLEKELTDHKFVILGANLFLDDLKIMTALSKILQKLN--DDPPTLLIWQG 436
Query: 325 NFCSHP--CNLSFHSFSS---LRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDA------ 373
+F S P ++S + SS + F L +++ L E++ +FIPGP+D
Sbjct: 437 SFTSVPVFASMSSRNISSSTQFKNNFDALATLLSRFDNLTENTTMIFIPGPNDLWGSMVS 496
Query: 374 -GPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
G S LP+ +P T+++ K N ++SSNP R+ +L
Sbjct: 497 LGASGTLPQDPIPSAFTKKINKVCKNVVWSSNPTRIAYL 535
>CGD|CAL0000130 [details] [associations]
symbol:DPB2 species:5476 "Candida albicans" [GO:0003887
"DNA-directed DNA polymerase activity" evidence=IEA;ISS]
[GO:0006281 "DNA repair" evidence=ISS] [GO:0006271 "DNA strand
elongation involved in DNA replication" evidence=ISS] [GO:0008622
"epsilon DNA polymerase complex" evidence=ISS] [GO:0003690
"double-stranded DNA binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006270 "DNA replication initiation"
evidence=IEA] InterPro:IPR007185 Pfam:PF04042 CGD:CAL0000130
GO:GO:0003677 GO:GO:0006281 EMBL:AACQ01000032 GO:GO:0006271
GO:GO:0008622 GO:GO:0003887 eggNOG:NOG311342 KO:K02325
RefSeq:XP_719326.1 STRING:Q5ACS8 GeneID:3639026 KEGG:cal:CaO19.7564
Uniprot:Q5ACS8
Length = 708
Score = 122 (48.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 46/181 (25%), Positives = 86/181 (47%)
Query: 166 EISTIQSLVGQTGRRW-VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIV 223
EIS I++++G+ G+++ + G++S+ + + LED +E++LS+A + G F+ +
Sbjct: 249 EISLIKNMLGRDGQKFLIFGLLSKNANDEYTLEDETDHIELNLSQAFKSQGLFYCPGMFL 308
Query: 224 VAEG------------EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG--------- 262
+ EG + G F V G PP E R+ SL + DF G
Sbjct: 309 LVEGIYSASGGNSNQDHGYIGGCFYVSNIGHPPSERRETSLDVYGNLDFLGMHRQIAPVT 368
Query: 263 GGTL---KKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEVVPS 318
G + K+ RL +EK N + + +D++LD+ +V+ L E+ ++ S
Sbjct: 369 GEKITKISKKFKKRLVLIEKTLYNHKLIFVGTDLYLDDFKVLDGLRKFFQKLEN-SIIES 427
Query: 319 L 319
+
Sbjct: 428 I 428
Score = 112 (44.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 316 VPSLFVFMGNFCSHPCNLSFHSFSSL------RLQFGKLGQMIAAHPRLKEHSRFLFIPG 369
+P VF G+F S P +++ S +++ + F +++ +P + + + IPG
Sbjct: 441 IPLALVFTGSFVSKPLSVTNSSVTNITNSESYKSNFDNFTTIVSKYPNIVSRCKIILIPG 500
Query: 370 PDDAGPSTV---------LPRCALPKYLTEELQKYIP--NAIFSSNPCRLNFL 411
+D ST P+ ++PK L+K +P N + S NP R+N+L
Sbjct: 501 KNDPWQSTYSLGSSSLNYFPQSSIPKVFINRLEKLLPKGNLVVSWNPTRINYL 553
>UNIPROTKB|Q5ACS8 [details] [associations]
symbol:DPB2 "Potential DNA polymerase epsilon subunit"
species:237561 "Candida albicans SC5314" [GO:0003887 "DNA-directed
DNA polymerase activity" evidence=ISS] [GO:0006271 "DNA strand
elongation involved in DNA replication" evidence=ISS] [GO:0006281
"DNA repair" evidence=ISS] [GO:0008622 "epsilon DNA polymerase
complex" evidence=ISS] InterPro:IPR007185 Pfam:PF04042
CGD:CAL0000130 GO:GO:0003677 GO:GO:0006281 EMBL:AACQ01000032
GO:GO:0006271 GO:GO:0008622 GO:GO:0003887 eggNOG:NOG311342
KO:K02325 RefSeq:XP_719326.1 STRING:Q5ACS8 GeneID:3639026
KEGG:cal:CaO19.7564 Uniprot:Q5ACS8
Length = 708
Score = 122 (48.0 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 46/181 (25%), Positives = 86/181 (47%)
Query: 166 EISTIQSLVGQTGRRW-VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIV 223
EIS I++++G+ G+++ + G++S+ + + LED +E++LS+A + G F+ +
Sbjct: 249 EISLIKNMLGRDGQKFLIFGLLSKNANDEYTLEDETDHIELNLSQAFKSQGLFYCPGMFL 308
Query: 224 VAEG------------EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG--------- 262
+ EG + G F V G PP E R+ SL + DF G
Sbjct: 309 LVEGIYSASGGNSNQDHGYIGGCFYVSNIGHPPSERRETSLDVYGNLDFLGMHRQIAPVT 368
Query: 263 GGTL---KKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEVVPS 318
G + K+ RL +EK N + + +D++LD+ +V+ L E+ ++ S
Sbjct: 369 GEKITKISKKFKKRLVLIEKTLYNHKLIFVGTDLYLDDFKVLDGLRKFFQKLEN-SIIES 427
Query: 319 L 319
+
Sbjct: 428 I 428
Score = 112 (44.5 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 29/113 (25%), Positives = 54/113 (47%)
Query: 316 VPSLFVFMGNFCSHPCNLSFHSFSSL------RLQFGKLGQMIAAHPRLKEHSRFLFIPG 369
+P VF G+F S P +++ S +++ + F +++ +P + + + IPG
Sbjct: 441 IPLALVFTGSFVSKPLSVTNSSVTNITNSESYKSNFDNFTTIVSKYPNIVSRCKIILIPG 500
Query: 370 PDDAGPSTV---------LPRCALPKYLTEELQKYIP--NAIFSSNPCRLNFL 411
+D ST P+ ++PK L+K +P N + S NP R+N+L
Sbjct: 501 KNDPWQSTYSLGSSSLNYFPQSSIPKVFINRLEKLLPKGNLVVSWNPTRINYL 553
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.323 0.139 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 418 393 0.00095 117 3 11 22 0.49 33
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 20
No. of states in DFA: 614 (65 KB)
Total size of DFA: 233 KB (2127 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.25u 0.12s 31.37t Elapsed: 00:00:01
Total cpu time: 31.25u 0.12s 31.37t Elapsed: 00:00:01
Start: Mon May 20 18:59:47 2013 End: Mon May 20 18:59:48 2013