BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014802
(418 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225455720|ref|XP_002267181.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Vitis vinifera]
Length = 527
Score = 673 bits (1736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/410 (77%), Positives = 365/410 (89%), Gaps = 1/410 (0%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M TRKK+Q+K KIRGY L+++ALDEILSF++ F DAEDEAIDLLLD+ E+ES LKSSI
Sbjct: 1 MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENES-LKSSI 59
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
+DKESV+RV S+LL+AEAA E G+ S SA+R++DAFL+ KF YD IKK FY++ G L
Sbjct: 60 LDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRL 119
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
IHG+ASAK+ALYR+RFLLLFQR+SRDQHFS+P+FD S FGSCEIS IQSL+GQTG+R
Sbjct: 120 AIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKR 179
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
WVMGVISQLEDGHF+LEDL ASVEI+LS AKITTGFF+ENTI+VAEGEM +DGIFQV TC
Sbjct: 180 WVMGVISQLEDGHFFLEDLTASVEINLSNAKITTGFFSENTIIVAEGEMFLDGIFQVSTC 239
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDRD+SL L+G DFFGGGTL +E+TLRLA LEK+A NDMFVILSD+WLDNEE M
Sbjct: 240 GFPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETM 299
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
GKL VLDG+E+VEVVPSLF+FMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA+HPRLKE
Sbjct: 300 GKLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKE 359
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HS+FLFIPGPDDAGPSTVLPRCALP YLTEE +KYIPNAIFSSNPCR+ F
Sbjct: 360 HSQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKF 409
>gi|297734108|emb|CBI15355.3| unnamed protein product [Vitis vinifera]
Length = 527
Score = 660 bits (1702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/410 (76%), Positives = 361/410 (88%), Gaps = 1/410 (0%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M TRKK+Q+K KIRGY L+++ALDEILSF++ F DAEDEAIDLLLD+ E+ES LKSSI
Sbjct: 1 MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENES-LKSSI 59
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
+DKESV+RV S+LL+AEAA E G+ S SA+R++DAFL+ KF YD IKK FY++ G L
Sbjct: 60 LDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRL 119
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
IHG+ASAK+ALYR+RFLLLFQR+SRDQHFS+P+FD S FGSCEIS IQSL+GQTG+R
Sbjct: 120 AIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKR 179
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
WVMGVISQLEDGHF+LEDL AS+ + + KITTGFF+ENTI+VAEGEM +DGIFQV TC
Sbjct: 180 WVMGVISQLEDGHFFLEDLTASLALLHQQYKITTGFFSENTIIVAEGEMFLDGIFQVSTC 239
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDRD+SL L+G DFFGGGTL +E+TLRLA LEK+A NDMFVILSD+WLDNEE M
Sbjct: 240 GFPPLEDRDESLASLSGLDFFGGGTLTREETLRLAGLEKKAVNDMFVILSDVWLDNEETM 299
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
GKL VLDG+E+VEVVPSLF+FMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA+HPRLKE
Sbjct: 300 GKLATVLDGYENVEVVPSLFIFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIASHPRLKE 359
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HS+FLFIPGPDDAGPSTVLPRCALP YLTEE +KYIPNAIFSSNPCR+ F
Sbjct: 360 HSQFLFIPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKF 409
>gi|255580392|ref|XP_002531023.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
gi|223529398|gb|EEF31361.1| DNA polymerase epsilon subunit B, putative [Ricinus communis]
Length = 536
Score = 637 bits (1642), Expect = e-180, Method: Compositional matrix adjust.
Identities = 322/418 (77%), Positives = 367/418 (87%), Gaps = 8/418 (1%)
Query: 1 MSGQT-RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESS---L 56
MS T RKK+QKK K+RGY L++DALDEIL FVNRF AED+AID+LLD+ + ES +
Sbjct: 1 MSNLTIRKKVQKKFKVRGYTLKVDALDEILPFVNRFQGAEDDAIDVLLDRLQSESQKVGV 60
Query: 57 KSSIIDKESVNRVTSVLLQA-EAAAEGDSGSASNHS---AIRVIDAFLVPKFRYDSIKKH 112
+SSIIDKE + RV S L++A +A EG S S S S AIRV+DAFLVPKFR+D IKK
Sbjct: 61 RSSIIDKEPIRRVISSLVEALDAVEEGPSESVSTSSSSSAIRVVDAFLVPKFRFDPIKKQ 120
Query: 113 FYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQS 172
FYQ+ G L IHG++SAKAALY+DR+LLLFQRVSRDQHFS+P+FD S++GSCEI+TIQS
Sbjct: 121 FYQYTGGLSIHGDSSAKAALYKDRYLLLFQRVSRDQHFSKPAFDTEISDYGSCEIATIQS 180
Query: 173 LVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
LVGQTGRRWVMGVISQLEDGHFYLEDL ASVEI+LSKAKITTGF +ENTIVVAEGEML+D
Sbjct: 181 LVGQTGRRWVMGVISQLEDGHFYLEDLTASVEINLSKAKITTGFLSENTIVVAEGEMLLD 240
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDI 292
G+FQV TCGFPPLEDRD+SLK+LA +DFFGGG+L KE+TL L +LE +A NDMFVILSDI
Sbjct: 241 GVFQVFTCGFPPLEDRDKSLKVLAKHDFFGGGSLTKEETLGLEELECKAVNDMFVILSDI 300
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD+EE MGKLE+VLDGFE EVVPSLFVFMGNFCSHPCNLSFHSFS+LRLQFGKLG+MI
Sbjct: 301 WLDSEEAMGKLEMVLDGFEIQEVVPSLFVFMGNFCSHPCNLSFHSFSTLRLQFGKLGKMI 360
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
AAH RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTE+LQK+IPNAIFS+NPCR+ F
Sbjct: 361 AAHQRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEDLQKHIPNAIFSTNPCRVKF 418
>gi|356560075|ref|XP_003548321.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Glycine max]
Length = 525
Score = 634 bits (1634), Expect = e-179, Method: Compositional matrix adjust.
Identities = 307/412 (74%), Positives = 357/412 (86%), Gaps = 8/412 (1%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRF--PDAEDEAIDLLLDQFEHESSLKS 58
M+ RKK+Q+K KIRGY L++DAL+EILSF +RF PD EDEAIDLLL E +SSLKS
Sbjct: 1 MNASMRKKVQRKCKIRGYNLKVDALNEILSFASRFEGPD-EDEAIDLLL--VELDSSLKS 57
Query: 59 SIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAG 118
+IIDKE+V RV S+LL+A A E S +A+ AIRV+DAFL+PK++YD +K FY+H G
Sbjct: 58 TIIDKETVQRVVSLLLEATEATEETSDAAA---AIRVVDAFLIPKYKYDYSRKQFYEHTG 114
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTG 178
SL IHGEASAK+ LYR+RFLLLFQR+SRDQHFS P+F+ S FGSCEIS IQSLVGQTG
Sbjct: 115 SLSIHGEASAKSDLYRERFLLLFQRLSRDQHFSAPAFESEFSHFGSCEISPIQSLVGQTG 174
Query: 179 RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
RRWVMGVISQLEDGH+YLEDL A+V+I+LS A+ITTG F+ENTIVVAEGEMLV+GIFQV+
Sbjct: 175 RRWVMGVISQLEDGHYYLEDLTAAVKINLSNARITTGLFSENTIVVAEGEMLVEGIFQVL 234
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
TCGFPPLEDRD+S+ LLAG+DFFG GT KE+T+RLA++E++A NDMF+ILSDIWLDNEE
Sbjct: 235 TCGFPPLEDRDKSVTLLAGHDFFGAGTFTKEETIRLAEMEEKAVNDMFIILSDIWLDNEE 294
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
+ KLEVVLDGFE VVPSLFVFMGNF S PCNLSFH +SSLR+QFGKLG+MIAAH RL
Sbjct: 295 TLKKLEVVLDGFEKEIVVPSLFVFMGNFSSKPCNLSFHFYSSLRMQFGKLGEMIAAHTRL 354
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
KEHS+FLFIPGPDDAGPS VLPRCALPKYLTEELQK+IPNAIFSSNPCR+ F
Sbjct: 355 KEHSKFLFIPGPDDAGPSNVLPRCALPKYLTEELQKHIPNAIFSSNPCRVKF 406
>gi|449507384|ref|XP_004163016.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
Length = 536
Score = 621 bits (1601), Expect = e-175, Method: Compositional matrix adjust.
Identities = 299/413 (72%), Positives = 353/413 (85%), Gaps = 9/413 (2%)
Query: 6 RKKIQKKMKIRG-YGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
RKK+Q+K KIRG Y ++++ALDEI+SFV+R EDEAI+ +LD HE SLKS I+DK+
Sbjct: 7 RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNL-HEESLKSPILDKD 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY-------QHA 117
+V+RV S+++ A+ E + ++ SA+ +I+AF +PKFRYD IK+ F +H
Sbjct: 66 AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKRSFCMHIPWAKKHT 125
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQT 177
+LPIHG+ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+ S FGSCEIS IQSLVGQT
Sbjct: 126 ENLPIHGDASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQT 185
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
GR+WVMGVISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GIFQV
Sbjct: 186 GRKWVMGVISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQV 245
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWLD+E
Sbjct: 246 VTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDSE 305
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
E MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAAHPR
Sbjct: 306 EAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHPR 365
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
L EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR+ F
Sbjct: 366 LNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRF 418
>gi|224120420|ref|XP_002318325.1| predicted protein [Populus trichocarpa]
gi|222858998|gb|EEE96545.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 613 bits (1582), Expect = e-173, Method: Compositional matrix adjust.
Identities = 302/417 (72%), Positives = 342/417 (82%), Gaps = 24/417 (5%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESS---LK 57
MS RK IQKK KIRGY L++DALD+ILSF NRF AEDEA+DLLLD + +S ++
Sbjct: 1 MSSTVRKLIQKKFKIRGYTLKIDALDQILSFTNRFLGAEDEALDLLLDHLQSQSQKLGVR 60
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGD----SGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
SSI+DKE VNR + LL+A+ A + D +S+ SAIRVIDAFL+PKFRYD IKK F
Sbjct: 61 SSILDKEPVNRAITALLEADDAVDEDFIANGAVSSSTSAIRVIDAFLIPKFRYDPIKKQF 120
Query: 114 YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSL 173
++H G L IHG+ASAKAALY+DRFLLL+QRV RD HFS+P+F S +GSCEI+ IQSL
Sbjct: 121 HEHTGGLHIHGDASAKAALYKDRFLLLYQRVLRDSHFSKPAFHTEMSHYGSCEIAPIQSL 180
Query: 174 VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
VGQ GRRWVMGVISQLEDGHFYLEDL AS NTIVVAEGEMLV+G
Sbjct: 181 VGQMGRRWVMGVISQLEDGHFYLEDLTAS-----------------NTIVVAEGEMLVNG 223
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIW 293
I+QVITCGFPPLE+RD+SLK LA +DFFGGGTL KE+TLRLA+LEKR+ NDMFVILSDIW
Sbjct: 224 IYQVITCGFPPLEERDKSLKSLAQHDFFGGGTLTKEETLRLAELEKRSLNDMFVILSDIW 283
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
+D+EE MGKLE VLDGFES EVVPSLFVFMGNFCSHPCNLSFHSFSSLR QFGKLGQMI
Sbjct: 284 VDSEEAMGKLETVLDGFESQEVVPSLFVFMGNFCSHPCNLSFHSFSSLRSQFGKLGQMIG 343
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
AH RLKEHSRF+FIPGP+DAGPSTVLPRC LPKYLTEELQK+IPNAIF+SNPCR+ F
Sbjct: 344 AHQRLKEHSRFMFIPGPEDAGPSTVLPRCPLPKYLTEELQKHIPNAIFASNPCRVKF 400
>gi|145361161|ref|NP_680197.2| DNA polymerase epsilon subunit B2 [Arabidopsis thaliana]
gi|63147392|gb|AAY34169.1| At5g22110 [Arabidopsis thaliana]
gi|332005601|gb|AED92984.1| DNA polymerase epsilon subunit B2 [Arabidopsis thaliana]
Length = 526
Score = 590 bits (1520), Expect = e-166, Method: Compositional matrix adjust.
Identities = 290/396 (73%), Positives = 333/396 (84%), Gaps = 6/396 (1%)
Query: 16 RGYGLRMDALDEILSFVNRFPDAED-EAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLL 74
RGY L+ DALDEIL F ++FPD +D EAIDLLLD + + KSS +D ESV + + LL
Sbjct: 18 RGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNLQE--THKSSTVDAESVRGLINRLL 75
Query: 75 QAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYR 134
A A E + SAS ++ +IDAFLVPKF YDS+KK F +H SLPIHGEASAK ALYR
Sbjct: 76 GAHNAPEEPTTSAS---SLAIIDAFLVPKFGYDSVKKKFNEHTSSLPIHGEASAKTALYR 132
Query: 135 DRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHF 194
+RF+LL QRVSR +HFSRP+FD S+F + EIS+IQSL+ Q GR+WVMGVISQLEDGHF
Sbjct: 133 ERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMGVISQLEDGHF 192
Query: 195 YLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKL 254
YLEDL+ASVEIDLSKAKITTGFFTENTI++AEGEM V+GIFQVITCGFPPLEDRD++LK
Sbjct: 193 YLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCGFPPLEDRDKTLKA 252
Query: 255 LAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE 314
+ YDFFGGGTL KE+ ++LADLE++A ND FVILSDIWLD+EEVM KLE VLDGFESVE
Sbjct: 253 HSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMRKLETVLDGFESVE 312
Query: 315 VVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
VPSLFVFMGNFCS PCNLSF S+SSLR QFGKLG+MI HPRLKE+SRFLFIPGP+DAG
Sbjct: 313 TVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENSRFLFIPGPEDAG 372
Query: 375 PSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
PSTVLPRCALPKYLTEEL+ IPNAIFSSNPCR+ F
Sbjct: 373 PSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKF 408
>gi|62320640|dbj|BAD95306.1| DNA polymerase epsilon subunit B -like protein [Arabidopsis
thaliana]
Length = 526
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 289/396 (72%), Positives = 333/396 (84%), Gaps = 6/396 (1%)
Query: 16 RGYGLRMDALDEILSFVNRFPDAED-EAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLL 74
RGY L+ DALDEIL F ++FPD +D EAIDLLLD + + KSS +D ESV + + LL
Sbjct: 18 RGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNLQE--THKSSTVDAESVRGLINRLL 75
Query: 75 QAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYR 134
A A E + SAS ++ +IDAFLVPKF YDS+KK F +H SLPIHGEASAK ALYR
Sbjct: 76 GAHNAPEEPTTSAS---SLAIIDAFLVPKFGYDSVKKRFNEHTSSLPIHGEASAKTALYR 132
Query: 135 DRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHF 194
++F+LL QRVSR +HFSRP+FD S+F + EIS+IQSL+ Q GR+WVMGVISQLEDGHF
Sbjct: 133 EQFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMGVISQLEDGHF 192
Query: 195 YLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKL 254
YLEDL+ASVEIDLSKAKITTGFFTENTI++AEGEM V+GIFQVITCGFPPLEDRD++LK
Sbjct: 193 YLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCGFPPLEDRDKTLKA 252
Query: 255 LAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE 314
+ YDFFGGGTL KE+ ++LADLE++A ND FVILSDIWLD+EEVM KLE VLDGFESVE
Sbjct: 253 HSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMRKLETVLDGFESVE 312
Query: 315 VVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
VPSLFVFMGNFCS PCNLSF S+SSLR QFGKLG+MI HPRLKE+SRFLFIPGP+DAG
Sbjct: 313 TVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENSRFLFIPGPEDAG 372
Query: 375 PSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
PSTVLPRCALPKYLTEEL+ IPNAIFSSNPCR+ F
Sbjct: 373 PSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKF 408
>gi|297812329|ref|XP_002874048.1| hypothetical protein ARALYDRAFT_489063 [Arabidopsis lyrata subsp.
lyrata]
gi|297319885|gb|EFH50307.1| hypothetical protein ARALYDRAFT_489063 [Arabidopsis lyrata subsp.
lyrata]
Length = 526
Score = 587 bits (1512), Expect = e-165, Method: Compositional matrix adjust.
Identities = 290/396 (73%), Positives = 332/396 (83%), Gaps = 6/396 (1%)
Query: 16 RGYGLRMDALDEILSFVNRFPD-AEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLL 74
RGY L+ DALDEIL F ++FPD A+ EAIDLLLD + S KSS +D ESV + + LL
Sbjct: 18 RGYNLKFDALDEILVFADQFPDDADGEAIDLLLDNLQE--SHKSSTVDAESVRGLINQLL 75
Query: 75 QAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYR 134
A A E + SAS ++ VIDAFL+PKF YDS+KK F +H SLPIHGEASAK ALYR
Sbjct: 76 GAHNAPEEPTTSAS---SLAVIDAFLIPKFGYDSVKKKFNEHTSSLPIHGEASAKTALYR 132
Query: 135 DRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHF 194
+RF+LL QRVSR +HFSRP+FD S+F + EIS+IQSL+ Q GR+WVMGVISQLEDGHF
Sbjct: 133 ERFMLLSQRVSRAEHFSRPAFDAEMSQFENNEISSIQSLISQRGRKWVMGVISQLEDGHF 192
Query: 195 YLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKL 254
YLEDL+ASVEIDLSKAKITTGFFTENTI++AEGEM V+GIFQVITCGFPPLEDRD++LK
Sbjct: 193 YLEDLSASVEIDLSKAKITTGFFTENTIILAEGEMQVNGIFQVITCGFPPLEDRDKTLKA 252
Query: 255 LAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE 314
+ YDFFGGGTL KE+T+RLADLE++A +D FVILSDIWLD+EEV+ KLE VLDGFESVE
Sbjct: 253 HSEYDFFGGGTLTKEETIRLADLERQAVSDTFVILSDIWLDDEEVIRKLETVLDGFESVE 312
Query: 315 VVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
VPSLFVFMGNFCS PCNLSF S+SSLR QFGKLG+MI HPRLKE+SRFLFIPGP DAG
Sbjct: 313 TVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENSRFLFIPGPGDAG 372
Query: 375 PSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
PSTVLPRCALP YLTEEL+ IPNAIFSSNPCR+ F
Sbjct: 373 PSTVLPRCALPNYLTEELRNIIPNAIFSSNPCRVKF 408
>gi|357148046|ref|XP_003574603.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Brachypodium
distachyon]
Length = 533
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 277/410 (67%), Positives = 340/410 (82%), Gaps = 2/410 (0%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
S RKK+Q+K ++RG+ L++DAL+E +F+ RFPDAED+A+DLLLD+ + E LKSSI+
Sbjct: 5 SAAMRKKLQRKFRLRGFTLKVDALEEAATFLARFPDAEDDALDLLLDELDKEP-LKSSIL 63
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSA-SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
D ++V RV S+L++AE A + S +A S SA+RV+D+F+VP+F+YD IKK FY+H G L
Sbjct: 64 DGDAVRRVVSLLVEAEEAVDAASPAATSARSALRVVDSFVVPRFQYDPIKKVFYEHTGRL 123
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
IHGEAS KAALYRDR+ +L QR++RD++FSRP+F+ V +E SCEI++IQSL+G TGRR
Sbjct: 124 AIHGEASDKAALYRDRYQVLLQRLARDKYFSRPAFETVMTEKDSCEITSIQSLIGCTGRR 183
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
W+MGVISQLE+ FYLEDL +V IDLS AKIT+GFF ENT++VAEGE+L +GIFQV TC
Sbjct: 184 WIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTC 243
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDR+ SL LL G DFFGGG + E+TLRL+ LE +A NDMFVILSD+WLD+ E M
Sbjct: 244 GFPPLEDREASLSLLMGLDFFGGGVIPTEETLRLSSLENKAVNDMFVILSDVWLDSAETM 303
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
KL VVLDG++SVEVVPSLFV MGNFCS PCNL+F+SF LRLQFGKLG+MIAA RLKE
Sbjct: 304 EKLAVVLDGYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARTRLKE 363
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HSRFLFIPGPDDAGPS LPRCALPKYL EELQK+IPNAIF SNPCR+ F
Sbjct: 364 HSRFLFIPGPDDAGPSKALPRCALPKYLIEELQKHIPNAIFVSNPCRVRF 413
>gi|226531428|ref|NP_001147081.1| DNA polymerase epsilon subunit 2 [Zea mays]
gi|195607112|gb|ACG25386.1| DNA polymerase epsilon subunit 2 [Zea mays]
gi|414869832|tpg|DAA48389.1| TPA: DNA polymerase epsilon subunit 2 [Zea mays]
Length = 533
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 273/410 (66%), Positives = 342/410 (83%), Gaps = 2/410 (0%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
S TR+K+Q+K ++RG+ L++DAL+E +F++RFPDAED+A+DLLLD+ + E L+SSI+
Sbjct: 5 SAATRRKLQRKFRLRGFTLKVDALEEAAAFLDRFPDAEDDALDLLLDELDKEP-LQSSIL 63
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSA-SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
D+++V RV ++L++AE A + S +A S SA+RV+DAFLVP+F YD IKK FY+H G L
Sbjct: 64 DRDAVRRVVALLVEAEEALDVASPAATSARSALRVVDAFLVPRFHYDPIKKVFYEHTGRL 123
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
+HGEA KA+LYRDR+ +L QR+SRD++FS+P+FD V +E SCEI+++QSL+G TGRR
Sbjct: 124 AVHGEAGDKASLYRDRYQVLLQRLSRDKYFSKPAFDTVATEHCSCEITSVQSLIGCTGRR 183
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
W+MGVISQLE+ FYLEDL +V IDLS AKIT+GFF ENT++VAEGE+L +GIFQV TC
Sbjct: 184 WIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTC 243
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDR+ S+ LL G+DFFGGG + E+TLRL+ LEK+A NDMFVILSD+WLDN E M
Sbjct: 244 GFPPLEDREASVSLLMGFDFFGGGVIPTEETLRLSSLEKKAVNDMFVILSDVWLDNPETM 303
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
KL VVLDG++SVEVVPSLFV MGNFCS PCNL+F+SF LR QFGKLG+MIAA RLKE
Sbjct: 304 EKLAVVLDGYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRFQFGKLGEMIAARSRLKE 363
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HSRFLFIPGPDDAGPS LPRCALPKYL EELQK+IPN+IF SNPCR+ F
Sbjct: 364 HSRFLFIPGPDDAGPSKALPRCALPKYLIEELQKHIPNSIFVSNPCRVKF 413
>gi|224029473|gb|ACN33812.1| unknown [Zea mays]
Length = 533
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 272/410 (66%), Positives = 342/410 (83%), Gaps = 2/410 (0%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
S TR+K+Q+K ++RG+ L++DAL+E +F++RFPDAED+A+DLLLD+ + E L+SSI+
Sbjct: 5 SAATRRKLQRKFRLRGFTLKVDALEEAAAFLDRFPDAEDDALDLLLDELDKEP-LQSSIL 63
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSA-SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
D+++V RV ++L++AE A + S +A S SA+RV+DAFLVP+F YD IKK FY+H G L
Sbjct: 64 DRDAVRRVVALLVEAEEALDVASPAATSARSALRVVDAFLVPRFHYDPIKKVFYEHTGRL 123
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
+HGEA KA+LYRDR+ +L QR+SRD++FS+P+FD V +E SCEI+++QSL+G TGRR
Sbjct: 124 AVHGEAGDKASLYRDRYQVLLQRLSRDKYFSKPAFDTVATEHCSCEITSVQSLIGCTGRR 183
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
W+MGVISQLE+ FYLEDL +V IDLS AKIT+GFF ENT++VAEGE+L +GIFQV TC
Sbjct: 184 WIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTC 243
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDR+ S+ LL G+DFFGGG + E+TLRL+ L+K+A NDMFVILSD+WLDN E M
Sbjct: 244 GFPPLEDREASVSLLMGFDFFGGGVIPTEETLRLSSLKKKAVNDMFVILSDVWLDNPETM 303
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
KL VVLDG++SVEVVPSLFV MGNFCS PCNL+F+SF LR QFGKLG+MIAA RLKE
Sbjct: 304 EKLAVVLDGYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRFQFGKLGEMIAARSRLKE 363
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HSRFLFIPGPDDAGPS LPRCALPKYL EELQK+IPN+IF SNPCR+ F
Sbjct: 364 HSRFLFIPGPDDAGPSKALPRCALPKYLIEELQKHIPNSIFVSNPCRVKF 413
>gi|242079433|ref|XP_002444485.1| hypothetical protein SORBIDRAFT_07g022680 [Sorghum bicolor]
gi|241940835|gb|EES13980.1| hypothetical protein SORBIDRAFT_07g022680 [Sorghum bicolor]
Length = 431
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/416 (64%), Positives = 342/416 (82%), Gaps = 2/416 (0%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
S TR+K+Q+K ++RG+ L++DAL+E +F++RFPDAED+A+DLLLD+ + E L+SSI+
Sbjct: 5 SAATRRKLQRKFRLRGFTLKVDALEEAAAFMDRFPDAEDDALDLLLDELDKEP-LQSSIL 63
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGS-ASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
D+++V RV ++L++AE A + S + S SA+RV+DAFLVP+F YD IKK FY+H G L
Sbjct: 64 DRDAVRRVVALLVEAEEALDAASPAVTSARSALRVVDAFLVPRFHYDPIKKVFYEHTGRL 123
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
+HGEA KA+LYRDR+ +L QR++RD++FS+P+FD V +E SCEI++IQSL+G TGRR
Sbjct: 124 AVHGEAGDKASLYRDRYQVLLQRLARDKYFSKPAFDTVATEDSSCEITSIQSLIGCTGRR 183
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
W+MGVISQLE+ FYLEDL +V IDLS AKIT+GFF ENT++VAEGE+L +GIFQV TC
Sbjct: 184 WIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTC 243
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDR+ S+ LL G DFFGGG + E+ LRL+ LEK+A NDMFVILSD+WLDN E M
Sbjct: 244 GFPPLEDREASVSLLMGLDFFGGGVIPSEEALRLSSLEKKAVNDMFVILSDVWLDNPETM 303
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
KL VVLDG++SVEVVPSLFV MGNFCS PCNL+F+SF LR QFGKLG+MIAA RLKE
Sbjct: 304 EKLAVVLDGYDSVEVVPSLFVLMGNFCSRPCNLAFNSFEELRFQFGKLGEMIAARSRLKE 363
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFLITVQL 416
HSRFLF+PGPDDAGPS LPRCALPKYL EELQK+IPNAIF SNPCR + + +++
Sbjct: 364 HSRFLFVPGPDDAGPSKALPRCALPKYLIEELQKHIPNAIFVSNPCRFDMKLMLRI 419
>gi|218196149|gb|EEC78576.1| hypothetical protein OsI_18564 [Oryza sativa Indica Group]
gi|222630291|gb|EEE62423.1| hypothetical protein OsJ_17214 [Oryza sativa Japonica Group]
Length = 533
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 271/410 (66%), Positives = 339/410 (82%), Gaps = 2/410 (0%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
S TR+K+Q+K K+RG+ L++DAL+E +F+ RFPDAED+A+DLLLD+ + E L+SSI+
Sbjct: 5 SAATRRKLQRKFKLRGFTLKVDALEEAAAFLARFPDAEDDALDLLLDELDKEP-LQSSIL 63
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSA-SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
D+++V RV ++L++A+ A + S +A S SA+RV+D+F+VP+F YD IKK FY+H L
Sbjct: 64 DRDAVRRVVALLVEADEAVDAASPAATSARSALRVVDSFVVPRFHYDPIKKVFYEHTSRL 123
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
IHGEA KAALYRDR+ +L QR++RD +FS+P+FD V +E +CEI++IQSL+G TGRR
Sbjct: 124 AIHGEAGDKAALYRDRYQVLLQRLARDIYFSKPAFDTVMTEDDNCEITSIQSLIGCTGRR 183
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
W+MGVISQLE+ FYLEDL +V IDLS AKIT+GFF ENT++VAEGE+L +GIFQV TC
Sbjct: 184 WIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVENTVIVAEGELLSNGIFQVNTC 243
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
GFPPLEDR+ SL +L G DFFGGG + E+T+RL+ LEK+A NDMFVILSD+WLDN E M
Sbjct: 244 GFPPLEDREASLSMLMGLDFFGGGVIPTEETVRLSTLEKKAMNDMFVILSDVWLDNYETM 303
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
KL VVLDG++S+E VPSLFV MGNFCS PCNL+F+SF LRLQFGKLG+MIAA RLKE
Sbjct: 304 EKLGVVLDGYDSLEAVPSLFVLMGNFCSRPCNLAFNSFEELRLQFGKLGEMIAARSRLKE 363
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HSRFLFIPGPDDAGPS LPRCALPKYLTEELQK+IPNAIF SNPCR+ F
Sbjct: 364 HSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNAIFVSNPCRVKF 413
>gi|147818232|emb|CAN73546.1| hypothetical protein VITISV_038180 [Vitis vinifera]
Length = 539
Score = 477 bits (1228), Expect = e-132, Method: Compositional matrix adjust.
Identities = 260/464 (56%), Positives = 303/464 (65%), Gaps = 118/464 (25%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M TRKK+Q+K KIRGY L+++ALDEILSF++ F DAEDEAIDLLLD+ E+ES LKSSI
Sbjct: 1 MGAATRKKVQRKFKIRGYTLKVEALDEILSFLSHFQDAEDEAIDLLLDELENES-LKSSI 59
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
+DKESV+RV S+LL+AEAA E G+ S SA+R++DAFL+ KF YD IKK FY++ G L
Sbjct: 60 LDKESVHRVVSLLLEAEAAVEETPGAISTRSALRIVDAFLMSKFCYDPIKKIFYENTGRL 119
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
IHG+ASAK+ALYR+RFLLLFQR+SRDQHFS+P+FD S FGSCEIS IQSL+GQTG+R
Sbjct: 120 AIHGDASAKSALYRNRFLLLFQRLSRDQHFSKPAFDTEMSHFGSCEISPIQSLIGQTGKR 179
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKA-----------------------KIT-TGF 216
WVMGVISQLEDGHF+LEDL ASVEI+LS A +IT G
Sbjct: 180 WVMGVISQLEDGHFFLEDLTASVEINLSNAISFTQLTVFFSIYGWDIGLFALPEITRIGH 239
Query: 217 FTE------------------------------NTIVVAEGEMLVDGIFQVITCGFPPLE 246
F+E NTI+VAEGEM +DGIFQV TCGFPPLE
Sbjct: 240 FSECDELNPLLKLVLMLLIRCMQYKITTGFFSENTIIVAEGEMXLDGIFQVSTCGFPPLE 299
Query: 247 DRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVV 306
DRD+SL L+G DFFGG E+ MGKL V
Sbjct: 300 DRDESLASLSGLDFFGG---------------------------------EKTMGKLATV 326
Query: 307 LDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLF 366
LDG+E+VE FGKLGQMIA+HPRLKEHS+FLF
Sbjct: 327 LDGYENVE------------------------------FGKLGQMIASHPRLKEHSQFLF 356
Query: 367 IPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
IPGPDDAGPSTVLPRCALP YLTEE +KYIPNAIFSSNPCR+ F
Sbjct: 357 IPGPDDAGPSTVLPRCALPNYLTEEFKKYIPNAIFSSNPCRIKF 400
>gi|13374870|emb|CAC34504.1| DNA polymerase epsilon subunit B-like protein [Arabidopsis
thaliana]
Length = 487
Score = 467 bits (1202), Expect = e-129, Method: Compositional matrix adjust.
Identities = 242/398 (60%), Positives = 285/398 (71%), Gaps = 49/398 (12%)
Query: 16 RGYGLRMDALDEILSFVNRFPDAED-EAIDLLLDQFEHESSLKSSIIDKESVNRVTSVL- 73
RGY L+ DALDEIL F ++FPD +D EAIDLLLD + +S + + + +TS+L
Sbjct: 18 RGYNLKFDALDEILVFADQFPDDDDGEAIDLLLDNLQETRMPPNSFLSRIILRNLTSILK 77
Query: 74 -LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAAL 132
L A A E + SAS ++ +IDAFLVPK +D + + H SLPIHGEASAK AL
Sbjct: 78 SLGAHNAPEEPTTSAS---SLAIIDAFLVPKDEFDRWLRVYVWHTSSLPIHGEASAKTAL 134
Query: 133 YRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDG 192
YR+RF+LL QRVSR +HFSRP+FD +SQ E+
Sbjct: 135 YRERFMLLSQRVSRAEHFSRPAFD---------------------------AEMSQFENN 167
Query: 193 HFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSL 252
+ KITTGFFTENTI++AEGEM V+GIFQVITCGFPPLEDRD++L
Sbjct: 168 EY----------------KITTGFFTENTIILAEGEMQVNGIFQVITCGFPPLEDRDKTL 211
Query: 253 KLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFES 312
K + YDFFGGGTL KE+ ++LADLE++A ND FVILSDIWLD+EEVM KLE VLDGFES
Sbjct: 212 KAHSEYDFFGGGTLTKEEMIKLADLERQAVNDTFVILSDIWLDDEEVMRKLETVLDGFES 271
Query: 313 VEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD 372
VE VPSLFVFMGNFCS PCNLSF S+SSLR QFGKLG+MI HPRLKE+SRFLFIPGP+D
Sbjct: 272 VETVPSLFVFMGNFCSRPCNLSFGSYSSLREQFGKLGRMIGNHPRLKENSRFLFIPGPED 331
Query: 373 AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
AGPSTVLPRCALPKYLTEEL+ IPNAIFSSNPCR+ F
Sbjct: 332 AGPSTVLPRCALPKYLTEELRNIIPNAIFSSNPCRVKF 369
>gi|168036141|ref|XP_001770566.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678087|gb|EDQ64549.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 517
Score = 457 bits (1175), Expect = e-126, Method: Compositional matrix adjust.
Identities = 215/405 (53%), Positives = 297/405 (73%), Gaps = 8/405 (1%)
Query: 7 KKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESV 66
K +Q+K +++G+ L +DAL ++F+ + +A++ LL + SLKS+++DK +V
Sbjct: 2 KTVQQKFRMKGFTLTLDALKAAVAFIYQSSLDPIDALESLLASTDDHPSLKSNMLDKTTV 61
Query: 67 NRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEA 126
+ A +G ++V+DAF +PK +D +K Y G+ P+HGEA
Sbjct: 62 ETII-------AEVKGLDDHTQGRRVLQVVDAFNIPKICFDPARKILYTQPGNFPLHGEA 114
Query: 127 SAKAALYRDRFLLLFQRVSRDQHFSRPSFDV-VNSEFGSCEISTIQSLVGQTGRRWVMGV 185
AKA+ YR+RFLLL QR+ +D++F++P+F+ V+S+FGSCEI+ +QSLVG TG RWVMGV
Sbjct: 115 QAKASFYRERFLLLQQRILKDKYFAKPAFEGHVSSQFGSCEITPLQSLVGCTGNRWVMGV 174
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPL 245
I Q+EDG F+LED++A V +D+S+AKIT GFFTEN++V+AEGE+LV+G+F+V T GFPPL
Sbjct: 175 ILQVEDGRFHLEDMSAVVPVDISEAKITAGFFTENSVVLAEGELLVNGVFKVYTMGFPPL 234
Query: 246 EDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEV 305
E R SL+ AG G L E+ +RL LEK+A NDMFV+LSD+WLD+EE MGKLE
Sbjct: 235 ERRQTSLRSAAGLSLLAGPPLTMEEFVRLEKLEKQAVNDMFVVLSDVWLDSEETMGKLEE 294
Query: 306 VLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFL 365
VLDG+ES+EVVPSLFV +GNFCS+PCNL+ H F+ LR QF +LG +IA+HPR+K+ S+FL
Sbjct: 295 VLDGYESMEVVPSLFVLLGNFCSYPCNLASHDFAELREQFSRLGSLIASHPRIKDGSQFL 354
Query: 366 FIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+PGP D GPS VLPR ALPKY T+E+ K++PNAIF SNPCR+ F
Sbjct: 355 LVPGPGDPGPSNVLPRPALPKYFTKEVLKHVPNAIFGSNPCRIRF 399
>gi|302826241|ref|XP_002994634.1| hypothetical protein SELMODRAFT_236997 [Selaginella moellendorffii]
gi|300137271|gb|EFJ04303.1| hypothetical protein SELMODRAFT_236997 [Selaginella moellendorffii]
Length = 523
Score = 419 bits (1078), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/411 (50%), Positives = 288/411 (70%), Gaps = 14/411 (3%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDK 63
Q +K Q K K+RG L +DAL +L F++ ++EA+ LL + + + SLKS+++ K
Sbjct: 5 QRMRKAQLKFKLRGLTLSVDALKAVLGFLDEQYLPDEEALQHLLAEVD-KISLKSNVLSK 63
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
E+ L+ +AA G + S N A+ V+DAF +P+F YD I+K FY++ + +H
Sbjct: 64 EAA-------LELISAATGVTSSQQN--ALLVVDAFKLPRFCYDPIRKMFYRYNKTPSVH 114
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM 183
G+A +K+ALY+DR LL QR+ RD+HF++P+FD+ S G+CE+S++QSL+G GRRWVM
Sbjct: 115 GDARSKSALYKDRLQLLHQRLIRDRHFAKPAFDMDGSRSGTCELSSLQSLLGCIGRRWVM 174
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKA----KITTGFFTENTIVVAEGEMLVDGIFQVIT 239
G++SQLEDG +YLEDL+A++ IDLS+A KI+ G +A + G F + T
Sbjct: 175 GIVSQLEDGRYYLEDLSATIPIDLSQAISFGKISNGELHNCCGRIAASKRHFSGSFLIST 234
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
CGFPPLE R+ SL + AG DFFG G L ++ RL LE++A NDMFV++SD+WLD+E+
Sbjct: 235 CGFPPLEGRNISLSVTAGLDFFGAGALSYDEISRLEVLERKAVNDMFVVISDVWLDDEQT 294
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
M LEVVLDGFE+V+VVPS+F+ MGNF S PCNLSFHSF LR F KLG +IA+H R+
Sbjct: 295 MRNLEVVLDGFENVDVVPSVFILMGNFLSRPCNLSFHSFGELRSHFDKLGTLIASHTRIS 354
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
S+F+ IPGP+D GPS+VLPR ALP Y T+EL K++PN F+SNPCR+ F
Sbjct: 355 STSKFVLIPGPEDPGPSSVLPRPALPSYFTKELAKHVPNVTFASNPCRIRF 405
>gi|302824345|ref|XP_002993816.1| hypothetical protein SELMODRAFT_236823 [Selaginella moellendorffii]
gi|300138336|gb|EFJ05108.1| hypothetical protein SELMODRAFT_236823 [Selaginella moellendorffii]
Length = 523
Score = 419 bits (1077), Expect = e-114, Method: Compositional matrix adjust.
Identities = 207/411 (50%), Positives = 287/411 (69%), Gaps = 14/411 (3%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDK 63
Q +K Q K K+RG L +DAL +L F++ ++EA+ LL + + + SLKS+++ K
Sbjct: 5 QRMRKAQLKFKLRGLTLSVDALKAVLGFLDEQYLPDEEALQHLLAEVD-KISLKSNVLSK 63
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
E+ + S AA G + S N A+ V+DAF +P+F YD I+K FY++ + +H
Sbjct: 64 EAAVELIS-------AATGVTSSEQN--ALIVVDAFKLPRFCYDPIRKMFYRYNKTPSVH 114
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM 183
G+A +K+ALY+DR LL QR+ RD+HF++P+FD+ S G+CE+S++QSL+G GRRWVM
Sbjct: 115 GDARSKSALYKDRLQLLHQRLIRDRHFAKPAFDMDGSRSGTCELSSLQSLLGCIGRRWVM 174
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKA----KITTGFFTENTIVVAEGEMLVDGIFQVIT 239
G++SQLEDG +YLEDL+A++ IDLS+A KI+ G +A + G F + T
Sbjct: 175 GIVSQLEDGRYYLEDLSATIPIDLSQAISFGKISNGELHNCCGRIAASKRHFSGSFLIST 234
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
CGFPPLE R+ SL + AG DFFG G L ++ RL LE++A NDMFV++SD+WLD+E+
Sbjct: 235 CGFPPLEGRNISLSVTAGLDFFGAGALSYDEISRLEVLERKAVNDMFVVISDVWLDDEQT 294
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
M LEVVLDGFE+V+VVPS+F+ MGNF S PCNLSFHSF LR F KLG +IA+H R+
Sbjct: 295 MRNLEVVLDGFENVDVVPSVFILMGNFLSRPCNLSFHSFGELRSHFDKLGTLIASHTRIS 354
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
S+F+ IPGP+D GPS+VLPR ALP Y T+EL K++PN F+SNPCR+ F
Sbjct: 355 STSKFVLIPGPEDPGPSSVLPRPALPSYFTKELAKHVPNVTFASNPCRIRF 405
>gi|115462247|ref|NP_001054723.1| Os05g0160800 [Oryza sativa Japonica Group]
gi|51038114|gb|AAT93917.1| unknown protein [Oryza sativa Japonica Group]
gi|55168061|gb|AAV43929.1| unknown protein [Oryza sativa Japonica Group]
gi|113578274|dbj|BAF16637.1| Os05g0160800 [Oryza sativa Japonica Group]
Length = 372
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 186/251 (74%), Positives = 215/251 (85%)
Query: 160 SEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTE 219
+E +CEI++IQSL+G TGRRW+MGVISQLE+ FYLEDL +V IDLS AKIT+GFF E
Sbjct: 2 TEDDNCEITSIQSLIGCTGRRWIMGVISQLEERQFYLEDLTGAVPIDLSNAKITSGFFVE 61
Query: 220 NTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEK 279
NT++VAEGE+L +GIFQV TCGFPPLEDR+ SL +L G DFFGGG + E+T+RL+ LEK
Sbjct: 62 NTVIVAEGELLSNGIFQVNTCGFPPLEDREASLSMLMGLDFFGGGVIPTEETVRLSTLEK 121
Query: 280 RAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFS 339
+A NDMFVILSD+WLDN E M KL VVLDG++S+E VPSLFV MGNFCS PCNL+F+SF
Sbjct: 122 KAMNDMFVILSDVWLDNYETMEKLGVVLDGYDSLEAVPSLFVLMGNFCSRPCNLAFNSFE 181
Query: 340 SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNA 399
LRLQFGKLG+MIAA RLKEHSRFLFIPGPDDAGPS LPRCALPKYLTEELQK+IPNA
Sbjct: 182 ELRLQFGKLGEMIAARSRLKEHSRFLFIPGPDDAGPSKALPRCALPKYLTEELQKHIPNA 241
Query: 400 IFSSNPCRLNF 410
IF SNPCR+ F
Sbjct: 242 IFVSNPCRVKF 252
>gi|302796817|ref|XP_002980170.1| hypothetical protein SELMODRAFT_111965 [Selaginella moellendorffii]
gi|300152397|gb|EFJ19040.1| hypothetical protein SELMODRAFT_111965 [Selaginella moellendorffii]
Length = 484
Score = 364 bits (934), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 189/416 (45%), Positives = 260/416 (62%), Gaps = 63/416 (15%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLL---DQFEHE------S 54
Q +K Q K K+RG L +DAL +L F++ ++EA+ LL D+ E +
Sbjct: 5 QRMRKAQLKFKLRGLTLSVDALKAVLGFLDEQYLPDEEALQHLLAEVDKISRELFFFLLA 64
Query: 55 SLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY 114
+LKS+++ KE+ L+ +AA G + S N A+ V+DAF +P+F YD I+K FY
Sbjct: 65 ALKSNVLSKEAA-------LELISAATGVTSSEQN--ALLVVDAFKLPRFCYDPIRKMFY 115
Query: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174
++ + +HG+A +K+ALY+DR LL QR+ RD+HF++P+FD+ S G+CEI
Sbjct: 116 RYNKTPSVHGDARSKSALYKDRLQLLHQRLIRDRHFAKPAFDMDGSRSGTCEI------- 168
Query: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
T+GF TEN I+VAEG + +GI
Sbjct: 169 --------------------------------------TSGFLTENCIIVAEGLLQANGI 190
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
FQ+ TCGFPPLE R+ SL + AG DFFG G L ++ RL LE++A NDMFV++SD+WL
Sbjct: 191 FQISTCGFPPLEGRNISLSVTAGLDFFGAGALSYDEISRLEVLERKAVNDMFVVISDVWL 250
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354
D+E+ M LEVVLDGFE+V+VVPS+F+ MGNF S PCNLSFHSF LR F KLG +IA+
Sbjct: 251 DDEQTMRNLEVVLDGFENVDVVPSVFILMGNFLSRPCNLSFHSFGELRSHFDKLGTLIAS 310
Query: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
H R+ S+F+ IPGP+D GPS+VLPR ALP Y T+EL K++PN F+SNPCR+ F
Sbjct: 311 HTRISSTSKFVLIPGPEDPGPSSVLPRPALPSYFTKELAKHVPNVTFASNPCRIRF 366
>gi|449463930|ref|XP_004149683.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Cucumis sativus]
Length = 375
Score = 315 bits (807), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 157/235 (66%), Positives = 194/235 (82%), Gaps = 3/235 (1%)
Query: 6 RKKIQKKMKIRG-YGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
RKK+Q+K KIRG Y ++++ALDEI+SFV+R EDEAI+ +LD HE SLKS I+DK+
Sbjct: 7 RKKVQRKAKIRGLYSIKLEALDEIVSFVSRSHGFEDEAIEFVLDNL-HEESLKSPILDKD 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
+V+RV S+++ A+ E + ++ SA+ +I+AF +PKFRYD IKK F H +LPIHG
Sbjct: 66 AVHRVISIMVAADKVGEESPNTITSTSALCIINAFDIPKFRYDPIKKIFL-HTENLPIHG 124
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
+ASAKAALYRDRFLLL QR+SRDQHFS+P+FD+ S FGSCEIS IQSLVGQTGR+WVMG
Sbjct: 125 DASAKAALYRDRFLLLSQRLSRDQHFSKPAFDIGMSHFGSCEISPIQSLVGQTGRKWVMG 184
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
VISQ+EDGHFYLEDL ASVEI+LS AKITTG FTENTI+VAEGEMLV+GIFQV +
Sbjct: 185 VISQMEDGHFYLEDLTASVEINLSSAKITTGLFTENTIIVAEGEMLVEGIFQVCS 239
>gi|449467705|ref|XP_004151563.1| PREDICTED: DNA polymerase epsilon subunit 2-like, partial [Cucumis
sativus]
Length = 292
Score = 313 bits (801), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 144/174 (82%), Positives = 160/174 (91%)
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
V+TCGFPPLE+R +SLKLLAG DFFG G L KE+TLR ADLEK+A NDMFVILSDIWLD+
Sbjct: 1 VVTCGFPPLEERGKSLKLLAGQDFFGDGVLPKEETLRRADLEKKAVNDMFVILSDIWLDS 60
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
EE MGKLE +LDGFE+VEVVPSLFV MGNFCSHPCN++F+SFSSLRLQFGKLG+MIAAHP
Sbjct: 61 EEAMGKLETILDGFENVEVVPSLFVLMGNFCSHPCNIAFNSFSSLRLQFGKLGKMIAAHP 120
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
RL EHS+FLFIPGPDDAGPSTVLPRCALPKYLTEELQ ++ NAIFSSNPCR+ F
Sbjct: 121 RLNEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVSNAIFSSNPCRVRF 174
>gi|384250215|gb|EIE23695.1| DNA polymerase epsilon, subunit B [Coccomyxa subellipsoidea C-169]
Length = 557
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 160/405 (39%), Positives = 239/405 (59%), Gaps = 14/405 (3%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
++ +Q G L +AL+ ++FV ED LL ++ K+ S
Sbjct: 5 KRAVQSAFLDAGLTLEKEALNAFVTFVEDNNGGEDLVYQLL------DACTKAC----AS 54
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
++T+ QA+ GS ++VI AF PK RYD I+K FYQ G +HG
Sbjct: 55 STKLTAA--QAQTVIGSLCGSGEKTDPVQVISAFDTPKLRYDPIRKVFYQIQGRPTLHGS 112
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQTGR-RWVM 183
+ K +Y DR LL QR+ R+++FSRP+F + ++ E++ +++L+G G+ ++VM
Sbjct: 113 SEEKVQMYLDRMYLLLQRLKRNRNFSRPAFAGIKADSRDFVELTELKALLGCVGQVKFVM 172
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
G ISQL DG ++LED++ S+ IDLS A+ T+GFFTEN IVVAEG + G+F+V GFP
Sbjct: 173 GCISQLTDGRYFLEDMSDSLPIDLSDAQTTSGFFTENCIVVAEGVLQHSGVFKVRALGFP 232
Query: 244 PLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
P+E R +S DFFGG T +++ L A D V+LSD+WLD + +L
Sbjct: 233 PVELRSESRLAAKNLDFFGGSTPSEDEQLAAAAALAEDEADRIVVLSDLWLDKPATLDRL 292
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363
VVL+GFE +E VPS+FV +GNF S CN + +++L+ FG L +A+ PR++ SR
Sbjct: 293 RVVLEGFEGLERVPSMFVLLGNFQSFSCNAASTDYAALKDNFGALAGTLASFPRIRAESR 352
Query: 364 FLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRL 408
+F+PG DAGP +LPR LP+ L L++ +P A+F+SNPCR+
Sbjct: 353 LVFVPGLGDAGPGAILPRPPLPESLIGALREQLPTALFTSNPCRI 397
>gi|218201273|gb|EEC83700.1| hypothetical protein OsI_29519 [Oryza sativa Indica Group]
Length = 293
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 143/253 (56%), Positives = 169/253 (66%), Gaps = 57/253 (22%)
Query: 160 SEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA--------- 210
+E +CEI++IQSL+G TGRRW+MGVISQLE+ FYLEDL +V IDLS A
Sbjct: 2 TEDDNCEITSIQSLIGCTGRRWIMGVISQLEERQFYLEDLTGAVPIDLSNANSITSFLST 61
Query: 211 --KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK 268
KIT+GFF ENT+++AEGE+L +GIFQV TCGFPPLEDR+ SL +L G DFFGGG +
Sbjct: 62 EHKITSGFFVENTVILAEGELLSNGIFQVNTCGFPPLEDREASLSMLMGLDFFGGGVIAA 121
Query: 269 EDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCS 328
E+T+RL+ LEK+A NDMFVILSD+WLD+ E
Sbjct: 122 EETVRLSTLEKKAMNDMFVILSDVWLDSSE------------------------------ 151
Query: 329 HPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYL 388
FGKLG+MIAA RLKEHSRFLFIPGP+DAGPS LPRC LPKYL
Sbjct: 152 ----------------FGKLGEMIAARSRLKEHSRFLFIPGPEDAGPSKALPRCTLPKYL 195
Query: 389 TEELQKYIPNAIF 401
TEELQK+IPNAIF
Sbjct: 196 TEELQKHIPNAIF 208
>gi|255082153|ref|XP_002508295.1| predicted protein [Micromonas sp. RCC299]
gi|226523571|gb|ACO69553.1| predicted protein [Micromonas sp. RCC299]
Length = 639
Score = 281 bits (718), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 148/395 (37%), Positives = 238/395 (60%), Gaps = 14/395 (3%)
Query: 28 ILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQ-----AEAAAEG 82
++ F+ R D A+ +LD+ + ++ L +SI+D V + + A AA +G
Sbjct: 4 VVDFLERCDDPH-AALSQMLDELDAKA-LTTSIVDLRCAEEVIHAVDKHNGTGAFAAPDG 61
Query: 83 DSGSA--SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL-PIHGEASAKAALYRDRFLL 139
+A + I ++DAF +P++ YD+ +K F+++AG + I+ A +K LYR+RFLL
Sbjct: 62 QGTAALLDDEDGITIVDAFDMPRYCYDTQRKVFHENAGKVKTINASAESKIELYRERFLL 121
Query: 140 LFQRVSRDQHFSRPSFDV--VNSEFGSCEISTIQSLVGQT-GRRWVMGVISQLEDGHFYL 196
L QRV+R + F +P+F ++ CE++ + L+G + G ++VMG +SQLED F+L
Sbjct: 122 LQQRVARHRMFVKPAFSASGAAAQRTYCELTPLTGLLGHSVGTKYVMGCLSQLEDDRFFL 181
Query: 197 EDLAASVEIDLSKAKITTGFFTENTIVVAEGEML-VDGIFQVITCGFPPLEDRDQSLKLL 255
EDL +++D+S A ++G +TEN IVVAEGE+ DG+ +V GFPP E R+ +
Sbjct: 182 EDLTGQIQVDVSHAATSSGLYTENCIVVAEGEVRKSDGVLEVRALGFPPAESREDTRNAT 241
Query: 256 AGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEV 315
DF G G L+ +D R+ + E + +DMFV+LSD+WLD E +L V +GF+S++
Sbjct: 242 NFLDFVGAGRLRPKDIERMVEEEAASTSDMFVVLSDVWLDRESTFARLRTVFEGFDSLDA 301
Query: 316 VPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGP 375
+PS+FV MG+F S P + F F KL +++ PRL++ +R++ +PGP D G
Sbjct: 302 IPSMFVLMGDFSSQPFGPTRFGFGDYAKGFDKLAELVREFPRLRQEARWVIVPGPGDPGV 361
Query: 376 STVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
S+ LPR L LTE L++ +P A F+SNP R+ +
Sbjct: 362 SSALPRPPLMPSLTESLREALPRATFASNPARVRY 396
>gi|356529451|ref|XP_003533305.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit
2-like [Glycine max]
Length = 324
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 129/174 (74%), Positives = 148/174 (85%)
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
++ CGFPPLEDRD+SL+ L+G+DF GG KE+T+RL ++EK NDMFVIL+DIWLDN
Sbjct: 33 LLICGFPPLEDRDKSLEFLSGHDFLDGGIFTKEETIRLREMEKGTVNDMFVILADIWLDN 92
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
EE + KLE VLD FESVEVVPSLFVFMGNF S PCN SFHS SSLR+ FGKLG+MIA+HP
Sbjct: 93 EEALRKLETVLDDFESVEVVPSLFVFMGNFSSKPCNRSFHSNSSLRMXFGKLGEMIASHP 152
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
RLKEHS+ L IPGPDDAGPST LPRCALP YLTEELQK+IP+AIFSSNP R+ F
Sbjct: 153 RLKEHSKLLIIPGPDDAGPSTALPRCALPNYLTEELQKHIPHAIFSSNPFRVKF 206
>gi|303279376|ref|XP_003058981.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460141|gb|EEH57436.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 627
Score = 271 bits (693), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 245/450 (54%), Gaps = 52/450 (11%)
Query: 9 IQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNR 68
+ + ++ G LR DA+ +L+F++R DA + A+ +LD + +S L SSI+ + +
Sbjct: 10 VNDEFRMSGLSLRRDAMAAVLTFLDRSDDA-NAALTDVLDALDTKS-LSSSIVGADVIAD 67
Query: 69 VTSVLLQAEAAAEGDSGSASNHS------------------------------------- 91
+TS L + G S A S
Sbjct: 68 ITSALDRKRGVFGGPSTPAGGGSPGDDDLNDDDANGGGGGRGASASARREDHLAAMLDAS 127
Query: 92 -AIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG----EASAKAALYRDRFLLLFQRVSR 146
I ++DAF VP+F YD+ +K F++ A A +K LYR+RFLLL QR++R
Sbjct: 128 DGITIVDAFDVPRFTYDTQRKVFHEDAAGPRARSVCATSADSKIELYRERFLLLQQRLAR 187
Query: 147 DQHFSRPSF--DVVNSEFGSCEISTIQSLVG---QTGRRWVMGVISQLEDGHFYLEDLAA 201
+ F++PSF SE CEI+ + L+G QT R+VMG +SQLED F+LEDL
Sbjct: 188 HRMFTKPSFAAGARASERTYCEITPLTGLLGCAHQT--RYVMGCLSQLEDDRFFLEDLTG 245
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLV-DGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
+++D++ A ++G +TEN IVVAEGE+ DG+F+V GFPP E R+++ DF
Sbjct: 246 QIQVDVTNAATSSGLYTENCIVVAEGEVRKRDGVFEVRALGFPPAESREETRSATNHVDF 305
Query: 261 FGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLF 320
FG G L D RL + E A+ DMFV+L+D+WLD E +L V +GF+S+E +P +F
Sbjct: 306 FGAGRLSPSDVSRLTEDEAAASEDMFVVLADVWLDKEATFKRLRTVFEGFDSLETIPGMF 365
Query: 321 VFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLP 380
VFMG+F S P + + +S F +L +I PRL++ +R++F+PGP D G + LP
Sbjct: 366 VFMGDFTSEPFGPTKYDYSGYAAGFDQLATLIEDFPRLRQEARWVFVPGPGDPGVAAALP 425
Query: 381 RCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
R L LT L+ +P F+SNP R+ +
Sbjct: 426 RPPLLPSLTGRLRDALPRVAFASNPARIRY 455
>gi|299470367|emb|CBN78416.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 518
Score = 261 bits (667), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 148/406 (36%), Positives = 228/406 (56%), Gaps = 20/406 (4%)
Query: 11 KKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE---HESSLKSSIIDKESVN 67
+ K++G GLR DA I+ V R + DEA+ ++ + + L S+++D ++V+
Sbjct: 9 RAFKLQGLGLRADAARAIVRVVER-EEGADEAVQAIIRSVKARIERNELSSNVVDVDTVS 67
Query: 68 RVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY-QHAGSLP--IHG 124
V + L E S N AF+ P+ +D ++ + AG+ +HG
Sbjct: 68 AVVADLTSREQDLADSSTQMQN--------AFVRPRLYFDPVRNTLLLEDAGTRKRSMHG 119
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
A +KA +YR+RFL++ QRV R F P + E+ ++S + SLVG RW++G
Sbjct: 120 PAESKARMYRERFLMVRQRVQRHDLFRPPIIESSRREY--IKLSPLDSLVGSADLRWLLG 177
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPP 244
+++Q E+G ++LED + +DLS A T G FTE+ +V+ EG+M G+FQV GFPP
Sbjct: 178 MLTQPEEGKYFLEDEVTRLPLDLSNAHKTEGLFTEHCVVIVEGKMTA-GVFQVAMVGFPP 236
Query: 245 LEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLE 304
+E R+ SL+ L D FG G + + R+ LE +A + MFVI+SD+ LD +VM KLE
Sbjct: 237 IEAREDSLRALGRADLFGTG-VNPQQMERMRQLELKATDAMFVIVSDVNLDKPQVMEKLE 295
Query: 305 VVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRF 364
+ DGF+ + P FV MGNFCS P + S + +F L ++I P L ++F
Sbjct: 296 ALFDGFQYAQPPPH-FVLMGNFCSSPITHAADSVAQAVARFDSLCKLILKFPDLASSAKF 354
Query: 365 LFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+F+PGP D G LPR LP Y T+ L++ + +A F++NPCRL F
Sbjct: 355 VFVPGPQDPGAGDTLPRPPLPAYFTQSLRENLKHASFATNPCRLRF 400
>gi|308807238|ref|XP_003080930.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
gi|116059391|emb|CAL55098.1| DEAD-box protein abstrakt (ISS) [Ostreococcus tauri]
Length = 1025
Score = 255 bits (652), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 236/418 (56%), Gaps = 18/418 (4%)
Query: 9 IQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLD---QFEHESS-LKSSIIDKE 64
+ ++ K+ G+ L DA+ ILS + + +D +L Q EH SS L + +I++
Sbjct: 487 VNERFKLHGFSLTSDAIRLILSRIGASGTPNRDDVDRVLKIIGQVEHTSSTLSAEVIERA 546
Query: 65 SVNR--------VTSVLLQAEAAAEG-DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
R V + EA A G D SAS+ + V DA ++ YD+ ++ F +
Sbjct: 547 FAERGADDSVVGVGVDVDDDEARATGTDRASASD--GLTVCDAHATRRYAYDAQRRTFDE 604
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
+ G+A +K LYRDRFLLL QR++R + F+R S E G+ E+STI SL+G
Sbjct: 605 TRRAARAAGQAESKIDLYRDRFLLLQQRLARSRQFARSSLKGTRREEGA-ELSTINSLLG 663
Query: 176 QTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
+ ++++MG++SQLEDG FY+EDL+ ++ +DL+ + + G FTEN +V+A GE+ DG+
Sbjct: 664 VSKEKKYIMGLLSQLEDGVFYMEDLSGTIRVDLTVCERSIGLFTENCVVLAAGEVRPDGV 723
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGG-TLKKEDTLRLADLEKRAANDMFVILSDIW 293
F+V+ FPP E R + + + DFFG G ++ + L E+ + FV+LSD+W
Sbjct: 724 FEVLELTFPPSEKRAATREATSAIDFFGAGHVIRPYEVEDLERKEQERVGEAFVVLSDVW 783
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD +L + + F++ + VP L VFMG+F S P + F + F +L +M+
Sbjct: 784 LDQPRTFDRLAKMFELFDAPDDVPGLMVFMGDFSSQPFGPTHCDFQAYIEGFERLAEMLQ 843
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
PRL++ SRF+F+PGP D G S LPR AL K L + +P A F+SNP ++ +
Sbjct: 844 DFPRLRQESRFVFVPGPGDPGLSAALPRPALQKSLVGSFVEKVPRAQFASNPAKIRYF 901
>gi|307102997|gb|EFN51262.1| hypothetical protein CHLNCDRAFT_141171 [Chlorella variabilis]
Length = 539
Score = 254 bits (648), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 157/409 (38%), Positives = 236/409 (57%), Gaps = 25/409 (6%)
Query: 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
T++ +Q + K G L +L++++ V PD + E + L+D+ E L +I D+
Sbjct: 8 TKRWLQTQFKTSGVTLDPKSLEKLVQAVQDVPDPQ-EFVHSLIDEIE-TGELAGAITDE- 64
Query: 65 SVNRVTSVLL-QAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
RVT LL Q +A EG S + A++V+DAF VP YD ++K F++ A
Sbjct: 65 --RRVTPALLEQVLSALEGRSQAPD---AVQVVDAFRVPHVVYDPVRKLFHRSA------ 113
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEF--GSCEISTIQSLVGQTG-RR 180
+K LY +RF L+ QR+ R++ F F + CE++ +++++G G +R
Sbjct: 114 ----SKVQLYVNRFHLVHQRLKRNKLFRAAKFAGLGGGGGQSDCELTELKAMLGVVGEQR 169
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
VMG ++Q E+G + +EDL+A + +DL++A+ T G FT+N IVVAEGE+ DG+F+V
Sbjct: 170 CVMGFLTQPEEGRYAIEDLSARLPVDLTEAEQTLGMFTQNCIVVAEGELQADGVFKVAAL 229
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
G PP E R +SL+ L G DFFGG + D +L E R A+D V+LSD+WLD EV+
Sbjct: 230 GMPPPERRAESLQALQGLDFFGG---QVPDERQLLSWEARHADDRIVLLSDVWLDRPEVL 286
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
L VL GF +E PSLFV MG F S+ N + ++ LR F LG+ I +P ++
Sbjct: 287 DNLHTVLAGFSQLEQPPSLFVLMGAFQSYAANAANTHYARLREHFAALGRAINQYPAIRA 346
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
S+F +PGP D GP LPR LP + L + +PNA+ +SNPCR+
Sbjct: 347 ASKFALVPGPGDLGPGGSLPRPGLPVAVAAPLLEAVPNAVLASNPCRIR 395
>gi|390346112|ref|XP_796825.2| PREDICTED: DNA polymerase epsilon subunit 2 [Strongylocentrotus
purpuratus]
Length = 524
Score = 249 bits (635), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/418 (35%), Positives = 227/418 (54%), Gaps = 24/418 (5%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSS 59
M+ + + I K+ G LR +AL +++ + + E ++ I+ +++ + + L S+
Sbjct: 1 MADKVKTGISAAFKMNGLALRSNALKYLVAALTPVTEIERNQWIEKIIEAVQKQP-LSSA 59
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS 119
++DK +++A D G N VID+F VP++ Y++ +K F +
Sbjct: 60 LLDK--------AIIEAAINECSDGGKEENEKMFNVIDSFTVPRYTYNAERKKFLMSNDA 111
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT- 177
+H A KA L+R+R+ +L QR SR FS P N G ++ ++ L+G T
Sbjct: 112 PNLHASAKYKADLFRERYNILLQRTSRHSLFSPPVQGASNETQGKKFQLKPVEFLLGSTA 171
Query: 178 --GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIF 235
G V+G+++QL++G F+LED +V++DL+KA+ TG FTEN V+AEG D +F
Sbjct: 172 KLGELIVLGMLTQLKEGKFHLEDPTGAVQLDLAKAQFHTGLFTENCFVLAEG-WYEDEVF 230
Query: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGG--GTLKKEDT-LRLADLEKRAANDMFVILSDI 292
V GFPP E D + +FFGG T K T L+L + EK A M V LSD+
Sbjct: 231 HVNGFGFPPAEPADTTRSYFGNLNFFGGPSATCAKSSTKLKLCEQEKEDA--MMVFLSDV 288
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD +V KL ++L G+ E+ P FVF GNF S P S + LQ L MI
Sbjct: 289 WLDKVDVQDKLRILLTGYS--EMPPMCFVFCGNFTSTPYGPSHNKILKESLQ--TLANMI 344
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
L E SRF+F+PGP+D GP VLPR +P+ LTE + +P A+F++NPCRL +
Sbjct: 345 CEFSTLVEQSRFIFVPGPEDPGPGNVLPRPPIPECLTEVITSKVPTAVFTTNPCRLQY 402
>gi|260790203|ref|XP_002590133.1| hypothetical protein BRAFLDRAFT_114751 [Branchiostoma floridae]
gi|229275321|gb|EEN46144.1| hypothetical protein BRAFLDRAFT_114751 [Branchiostoma floridae]
Length = 541
Score = 245 bits (625), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 152/435 (34%), Positives = 227/435 (52%), Gaps = 42/435 (9%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLK 57
M+G+ + I K+ G LR++A L E L+ VN +E +D +++ + + L+
Sbjct: 1 MAGRLKSSIVSAFKMHGLSLRIEASKFLVEALTPVNEV--EREEWLDRIIEAVQKQP-LE 57
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
SS+ID+ ++ + +Q G + VIDAF +PKF Y+S +K F
Sbjct: 58 SSMIDRLTLEAAVNDCVQG--------GEEDSDQVFSVIDAFDIPKFDYNSERKKFMPST 109
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDV----VNSEFGSCEISTIQSL 173
+HG+A+ KA L+RDR+ +LFQR SR + F+ P +F + +
Sbjct: 110 APRSLHGQATDKAQLFRDRYTVLFQRTSRHELFTPPVMGANPVHQTKKFQLRPVEYLLGS 169
Query: 174 VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA----------------KITTGFF 217
V + G V+G+++QL+ G +YLED +V++DLS+ G F
Sbjct: 170 VAKLGEIIVLGMVTQLKPGSYYLEDPTGAVKMDLSQTISFSLTRRAISLTALYNFHNGLF 229
Query: 218 TENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG--GTLKKEDTLRLA 275
TEN V+AEG D +F V GFPP E + +FFGG T K T +L
Sbjct: 230 TENCFVLAEG-WYEDQVFHVTAFGFPPPEPAKTTRAYFGNINFFGGPSATCAKAST-KLR 287
Query: 276 DLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF 335
+E+ + M V LSD+WLD+ +VM KL V+ G+ E+ P+ FV GNF S P S
Sbjct: 288 VIERENEDAMIVFLSDVWLDDSKVMEKLRVLFTGYS--EICPTAFVLCGNFTSSPFGSS- 344
Query: 336 HSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKY 395
+LR F LG +IA P L E SRF+F+PG D GP VLPR +P +TEEL++
Sbjct: 345 -HIKTLRESFRGLGNLIAQFPSLVESSRFIFVPGSQDPGPGNVLPRPNIPDCVTEELRRK 403
Query: 396 IPNAIFSSNPCRLNF 410
+P A F++NPCR+ +
Sbjct: 404 VPTATFTTNPCRIQY 418
>gi|410898140|ref|XP_003962556.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Takifugu
rubripes]
Length = 528
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 151/421 (35%), Positives = 239/421 (56%), Gaps = 32/421 (7%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ + K+ K+RG LR +A L E++ VN D ED ++ +LD E + L S++
Sbjct: 6 KIKNKVSTAFKMRGLMLRPEASKYLVEVMESVNS-SDLED-VMEKVLDAVEKQP-LSSNM 62
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNH--SAIRVIDAFLVPKFRYDSIKKHFYQHA- 117
I+ L AE+A + S S + + +I AF VP++ Y +K F +
Sbjct: 63 IE----------LSVAESAVQDCSQSCDENIDNVFNIIGAFDVPRYIYSVERKKFIPLSM 112
Query: 118 GSLP---IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF-DVVNSEFGSCEISTIQSL 173
S P + G A KA L+R+R+ +L QR+ R + F+ P+ V+ ++ TI++L
Sbjct: 113 TSHPAPSLCGWAKDKAELFRERYTILQQRIHRHELFTPPAIGTAVDEGQNKFQLKTIEAL 172
Query: 174 VGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML 230
+G T G V+G+I+QL++G FYLEDL+ +V++D+SKA+ G +TE+ V+AEG
Sbjct: 173 LGSTAKMGEVIVLGMITQLKEGKFYLEDLSGTVQLDMSKAQFHNGLYTESCFVLAEG-WY 231
Query: 231 VDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVIL 289
D +F V GFPP E + +FFGG + + + +L LE+ + MFVIL
Sbjct: 232 EDSVFHVNGFGFPPTEPSSATRAYYGSMNFFGGPSSTSVKASAKLKQLEEENEDAMFVIL 291
Query: 290 SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG 349
SD+WLDN EV+ KL ++ G+ S+ P+ F+F+GNF S P + SL+ L
Sbjct: 292 SDVWLDNVEVLEKLNLMFSGYSSMP--PTCFIFIGNFSSAPYGNA--RIKSLKDSLKALA 347
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
+I AHP + SRFLF+PGP+D GP +LPR L ++TEE ++ +P ++F++NPCR+
Sbjct: 348 DVICAHPNIHNSSRFLFVPGPEDPGPGAILPRPPLANHITEEFRQRVPFSVFTTNPCRVQ 407
Query: 410 F 410
+
Sbjct: 408 Y 408
>gi|156381328|ref|XP_001632217.1| predicted protein [Nematostella vectensis]
gi|156219270|gb|EDO40154.1| predicted protein [Nematostella vectensis]
Length = 523
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 148/421 (35%), Positives = 223/421 (52%), Gaps = 28/421 (6%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKS 58
M+ RKK+ ++ G L+ DA + + P +E E D L E + L S
Sbjct: 1 MADPLRKKVLSTFRLNGLSLQSDATKYLRDVL--VPLSEPEIEDWLEKIVETVQKQPLSS 58
Query: 59 SIIDKESVNRVTSVLLQAEAAAEGDSGSASNHS--AIRVIDAFLVPKFRYDSIKKHFYQH 116
+++D+E V E A + S S S A +IDAF VP F ++S +K F+
Sbjct: 59 TLVDREVV----------ETAVQECSRDPSEDSDKAFCIIDAFDVPTFAFNSERKKFFPV 108
Query: 117 AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR-PSFDVV--NSEFGSCEISTIQSL 173
+G +H A K+ LY++R+ ++ QR R + FS + V N ++ T++ L
Sbjct: 109 SGRSALHPNAEVKSELYKERYTVIQQRTIRHELFSNVGDLEAVKQNQTSDKFDLKTVEYL 168
Query: 174 VGQTG---RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML 230
+G TG V+G+++Q+++G FYLED +VE+D+++ K TG +TEN V+AEG
Sbjct: 169 LGSTGSLGNVIVLGMLTQIKEGKFYLEDPTGAVELDITEVKFHTGLYTENCFVLAEGNY- 227
Query: 231 VDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVIL 289
D IF V GFPP E + +FFGG T + + +L ++E+ + MFVI+
Sbjct: 228 DDEIFHVTAIGFPPAEPSKVTRAQFGNINFFGGPSTSCAKASSKLKEMERENKDAMFVIM 287
Query: 290 SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG 349
SD+ LD VM KL +L G+ ++ PSLF+ GNF S P + L+
Sbjct: 288 SDVHLDQPRVMEKLRTLLTGYSTMP--PSLFILCGNFNSQP--YGPDQYKILKESLQVFA 343
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
M+A P L E SRFLFIPGP D GP +LPR +P+ L + + IPNA F+SNPCR+
Sbjct: 344 SMVAEFPSLVEQSRFLFIPGPQDPGPGNILPRPPIPESLRQVVTTKIPNATFASNPCRIQ 403
Query: 410 F 410
+
Sbjct: 404 Y 404
>gi|297726503|ref|NP_001175615.1| Os08g0466050 [Oryza sativa Japonica Group]
gi|255678510|dbj|BAH94343.1| Os08g0466050 [Oryza sativa Japonica Group]
Length = 311
Score = 234 bits (598), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 136/203 (66%), Gaps = 46/203 (22%)
Query: 208 SKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLK 267
++ KIT+GFF ENT+++AEGE+L +GIFQV TCGFPPLEDR+ SL +L G DFFGGG +
Sbjct: 35 TEHKITSGFFVENTVILAEGELLSNGIFQVNTCGFPPLEDREASLSMLMGLDFFGGGVIA 94
Query: 268 KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
E+T+RL+ LEK+A NDMFVILSD+WLD+ E
Sbjct: 95 AEETVRLSTLEKKAMNDMFVILSDVWLDSSE----------------------------- 125
Query: 328 SHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKY 387
FGKLG+MIAA RLKEHSRFLFIPGP+DAGPS LPRC LPKY
Sbjct: 126 -----------------FGKLGEMIAARSRLKEHSRFLFIPGPEDAGPSKALPRCTLPKY 168
Query: 388 LTEELQKYIPNAIFSSNPCRLNF 410
LTEELQK+IPNAIF SNPCR+ F
Sbjct: 169 LTEELQKHIPNAIFVSNPCRVKF 191
>gi|291225848|ref|XP_002732910.1| PREDICTED: DNA-directed DNA polymerase epsilon 2-like [Saccoglossus
kowalevskii]
Length = 521
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 226/416 (54%), Gaps = 20/416 (4%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAED-EAIDLLLDQFEHESSLKSS 59
M+ + + ++ K+ G L+ DA ++ + D E + ID L++ + + L S
Sbjct: 1 MATKLKSEVVSAFKMNGLSLKSDASKFLVEALMTVDDTERYDWIDRLIEAVQKQQ-LLSP 59
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS 119
+ID+ ++ + + + A +E D+ N VI+ F P F Y+ +K F +
Sbjct: 60 MIDQSTIEKA---IHECNADSEEDTDQIFN-----VINVFNAPHFVYNYARKKFVKSTSV 111
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT- 177
+HG A +K A++R+R+ +L QR SR F+ P + G ++ ++ L+G T
Sbjct: 112 PSLHGNADSKTAIFRERYNILHQRTSRHNLFTAPVTGAPQEQKGKKFQLKPVEFLLGSTS 171
Query: 178 --GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIF 235
G V+G+++QL++G ++LED +V++DLS+A +G FTEN V+AEG D +F
Sbjct: 172 KLGEIIVLGMLTQLKEGKYFLEDPTGAVQLDLSQADFHSGLFTENCFVLAEG-WYEDEVF 230
Query: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWL 294
+ GFPP E D + +FFGG + T +L +EK + +FV LSD+WL
Sbjct: 231 HINAFGFPPPEPADTTRSYFGSINFFGGPSATSVKTSQKLKTIEKDNEDAIFVFLSDVWL 290
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354
D +V KL+ + GF +V P+ FVF GNF S P H +L+ +L ++
Sbjct: 291 DQLQVRQKLQALFSGF--ADVPPTAFVFCGNFSSAP--YGSHHIKALKDSLHELSVILTE 346
Query: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P L + S+F+F+PGP D GP +LPR L + +TEE +K +P +IF++NPCR+ +
Sbjct: 347 FPTLVKESKFVFVPGPQDPGPGHILPRPPLSECITEEFRKKVPTSIFATNPCRIQY 402
>gi|348544243|ref|XP_003459591.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Oreochromis
niloticus]
Length = 528
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 143/419 (34%), Positives = 228/419 (54%), Gaps = 28/419 (6%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ + K+ K+RG LR +A L E+L VN D+ I+ +LD E + L SS+
Sbjct: 6 RIKTKVSSGFKMRGLILRPEASRYLVEVLESVNH--SELDDVIERVLDAVEKQP-LSSSM 62
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ-HAGS 119
I+ V Q + + + +I AF VP++ Y +K F S
Sbjct: 63 IELSVVESAVQDCTQ--------TCDETIDNVFNIIGAFDVPRYIYSVERKKFVPISMTS 114
Query: 120 LP---IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEF-GSCEISTIQSLVG 175
P + G A KA L+R+R+ +L QR R + F+ P+ E ++ T+++L+G
Sbjct: 115 HPAPSLCGLARVKAELFRERYTILQQRTHRHELFTPPAIGAAVEEGQNKFQLKTVEALLG 174
Query: 176 QT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
T G V+G+I+QL++G FYLED + ++++DLSKA+ G +TE+ V+AEG D
Sbjct: 175 STAKLGEVIVLGMITQLKEGKFYLEDPSGTIQLDLSKAQFHNGLYTESCFVLAEG-WYED 233
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSD 291
+F V GFPP E + +FFGG T + + +L LE+ + MFVI+SD
Sbjct: 234 SVFHVNGFGFPPTEPSSATRAYYGNINFFGGPSTTSVKMSAKLKQLEEENEDAMFVIVSD 293
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
+WLD+ EVM KL ++ G+ ++ P+ F+F GNF S P + SL+ L
Sbjct: 294 VWLDSVEVMEKLNIMFSGYAAMP--PTCFIFCGNFSSAPYGKT--QLKSLKESLKALADA 349
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I ++P + SRF+F+PGP+D GP T+LPR L ++TEE ++ +P ++F++NPCR+ +
Sbjct: 350 ICSYPSIHSSSRFVFVPGPEDPGPGTILPRPPLADHITEEFRQRVPFSVFTTNPCRIQY 408
>gi|328869891|gb|EGG18266.1| putative DNA polymerase epsilon subunit B [Dictyostelium
fasciculatum]
Length = 595
Score = 230 bits (587), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 146/427 (34%), Positives = 222/427 (51%), Gaps = 33/427 (7%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAED------------EAIDLLLD 48
M Q +K I K ++G ++ DAL ++S+ N D +D E +DL+L
Sbjct: 1 MDLQLKKSITKSFSLQGLSIKADALKHLISYTNNEQDRDDSGSSQPLNERILELVDLILT 60
Query: 49 QFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDS 108
+ +S+LK + +DKE+++ E ++ DSGS AI+VI AF VP F YD
Sbjct: 61 NLD-KSTLKGNFVDKETISNSL-----KELESQSDSGSIEKE-AIKVISAFDVPLFHYDQ 113
Query: 109 IKKHFY-QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEI 167
KK F + +HG A +K+ L+R R+ Q + R F+ P +
Sbjct: 114 NKKLFVKEEKPEKSLHGNAKSKSELFRRRYQTALQILERHPTFAAPILPNQKKSLDQFTL 173
Query: 168 STIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEG 227
+ I SL+G G + V+G ISQ+ +G +YLEDL + V++DL+ A G TEN IV+ G
Sbjct: 174 TPINSLLGNPGMKCVLGTISQIVEGKYYLEDLNSKVQLDLTNATSEYGLITENGIVLVWG 233
Query: 228 EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL--RLADLEKRAANDM 285
E DG+F+ + E+R +SL LL G D FG + D + +L E N +
Sbjct: 234 E-FEDGLFKAASIRPSNTEERQKSLDLLQGLDMFGD---RPNDRMMHKLKQYENEVENSI 289
Query: 286 FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQF 345
++ SD+WLDN V+ LE V + + V P V MGNF HP L + L+ F
Sbjct: 290 -ILFSDVWLDNPTVVSHLESVFEKY--VHFPPIAVVLMGNFTEHP--LIGGTQYKLKTHF 344
Query: 346 GKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS--TVLPRCALPKYLTEELQKYIPNAIFSS 403
L +I +P L ++F+F+PGP D S +LP+ A+ Y T+ ++ IPN+IF++
Sbjct: 345 DNLASIIIKYPELLIKTKFIFVPGPTDPTGSLLNILPKPAIVDYFTKGFKQRIPNSIFTT 404
Query: 404 NPCRLNF 410
NPCRL +
Sbjct: 405 NPCRLRY 411
>gi|224007899|ref|XP_002292909.1| hypothetical protein THAPSDRAFT_263717 [Thalassiosira pseudonana
CCMP1335]
gi|220971771|gb|EED90105.1| hypothetical protein THAPSDRAFT_263717 [Thalassiosira pseudonana
CCMP1335]
Length = 504
Score = 229 bits (585), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 135/405 (33%), Positives = 232/405 (57%), Gaps = 15/405 (3%)
Query: 14 KIRGYGLRMDALDEILSFV-NRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNR--VT 70
K+RG ++ AL+ IL+ + N P ++D+ + ++D+ + K + + +N+ VT
Sbjct: 2 KMRGLSIQAPALNSILNVLKNEPPTSKDDTLFAIIDEIKE----KMTTVGGGGMNQCVVT 57
Query: 71 SVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKA 130
+ LL+ A A++++DAF P+ YDS++K F G + GEA K
Sbjct: 58 TDLLEDVVADMSRGAKDVTEEAVQLLDAFKTPRLEYDSMRKVFSLVEGGKSVCGEAVDKV 117
Query: 131 ALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLE 190
++ R+ L+ QR+ R F +P + ++ ++SL+G++GRR+++G+I Q+E
Sbjct: 118 DMFSQRYSLIHQRILRQDIF-QPKLITARGGGTTHTLTPVESLLGRSGRRFLLGMIVQVE 176
Query: 191 DGHFYLEDLAASVEIDLSKAKI-TTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRD 249
+G +YLED + V ++ S+A + T GF TEN++V+ EGE +DG+ V G P +E+R
Sbjct: 177 EGKYYLEDHTSQVLLNFSQASLLTDGFVTENSVVLVEGEA-IDGVLHVHHMGNPIVENRS 235
Query: 250 QSLKL--LAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVV 306
S+K L D F G+L + + LR ++ K + MFV+LSD+ LD+ V+ K+E++
Sbjct: 236 DSIKAIGLQNTDIFNSIGSLSELEKLRDQEM-KHGQDGMFVVLSDVHLDSPAVIEKIELM 294
Query: 307 LDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLF 366
L+G+ +P +FVFMGNF S P + + ++ F L +I P + RF+F
Sbjct: 295 LEGYSDFTPLP-IFVFMGNFTSKPLSGASDGTKAMIGYFEDLAAVITKFPNIAAEGRFVF 353
Query: 367 IPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
+PGP+D G + VLPR +P + T L+ + +A+F+SNPCR+ F
Sbjct: 354 VPGPNDPGITGVLPRGPIPNFFTSSLRSKVKHAVFASNPCRMRFF 398
>gi|189230162|ref|NP_001121405.1| uncharacterized protein LOC100158493 [Xenopus (Silurana)
tropicalis]
gi|158254287|gb|AAI54198.1| Polymerase (DNA directed), epsilon 2 [Danio rerio]
gi|183985608|gb|AAI66105.1| LOC100158493 protein [Xenopus (Silurana) tropicalis]
Length = 527
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 140/419 (33%), Positives = 232/419 (55%), Gaps = 28/419 (6%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIID 62
+ ++K+ K+RG LR ++ +L + AE +E ++ +LD E + L SS++D
Sbjct: 5 RVKQKVNAGFKMRGLILRPESSRFLLQVLESVSPAELEEVLERVLDSVEKQP-LSSSMVD 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHAGS- 119
L EAA + S S +I AF VP+F + + +K F + +
Sbjct: 64 ----------LCVLEAAVQDCSQSCDETIDHVFNIIGAFDVPRFIFSTERKKFVPISMAN 113
Query: 120 --LP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSE-FGSCEISTIQSLVG 175
LP + G+A KA L+R+R+ +L QR R + F+ P E ++ T+++L+G
Sbjct: 114 HPLPKLCGQARDKAELFRERYTILQQRTHRHELFTPPVIGSAQDEGRNKFQLKTVEALLG 173
Query: 176 QTGRRW---VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
+ R V+G+I+QL +G FYLED + +V++D+SKA+ +G +TE+ V+AEG D
Sbjct: 174 SSARLGEVIVLGMITQLREGKFYLEDPSGTVQLDISKAQFHSGLYTESCFVLAEG-WYED 232
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSD 291
+F V GFPP E + +FFGG + + + +L LE+ + MFV++SD
Sbjct: 233 SVFHVSAFGFPPTEPSSFTRAYFGNVNFFGGPSSTAVKASAKLKQLEEENEDAMFVLVSD 292
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
+WLD+ EV+ K+ + G+ ++ P+ F+F G+F S P + SLR F L +
Sbjct: 293 VWLDSVEVLEKIHTMFSGYSALP--PTCFIFCGSFSSAPYGRT--QLRSLRDSFKALADL 348
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I P + SRF+F+PGP+D GP VLPR L +++TEE Q+ +P ++F++NPCR+ +
Sbjct: 349 ICEFPSIHSSSRFVFVPGPEDPGPGAVLPRPPLAEHITEEFQQRVPLSVFTTNPCRIQY 407
>gi|66816615|ref|XP_642317.1| hypothetical protein DDB_G0278367 [Dictyostelium discoideum AX4]
gi|74856646|sp|Q54Y85.1|DPOE2_DICDI RecName: Full=DNA polymerase epsilon subunit 2; AltName: Full=DNA
polymerase II subunit 2; AltName: Full=DNA polymerase
epsilon subunit B
gi|60470376|gb|EAL68356.1| hypothetical protein DDB_G0278367 [Dictyostelium discoideum AX4]
Length = 676
Score = 227 bits (579), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 135/415 (32%), Positives = 222/415 (53%), Gaps = 26/415 (6%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M Q +K+I K + G+ ++ DA+ I++ + + ID LL + L++
Sbjct: 1 MDIQWKKQITKSFSLTGFSIKADAMKCIINRIKNEGYDITQLIDNLLKNLDKSQYLQTI- 59
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAG-S 119
E ++ + +S A A++VIDAF P F +DS K F +
Sbjct: 60 ---EGCFKLIDTI---------NSSDAIEKEALKVIDAFNTPLFNFDSNSKQFIKSENFD 107
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGSCEISTIQSLVGQT 177
+HG +++K+ LYR R+L + QR R+ +FS P D + +E+ + I+ + SL+G T
Sbjct: 108 RSLHGSSNSKSDLYRKRYLKVLQRTERNDYFSTPVLASDKLKNEYQT--ITPLSSLLGNT 165
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
GR+ V+G ISQ+E+ FY+EDL +V+ID+SKAK G T N+I+ A GE +DG+F
Sbjct: 166 GRKHVLGTISQIEEDQFYIEDLNTNVKIDISKAKFEFGIVTINSIIQASGE-FIDGVFIA 224
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
PP E+R ++LK L D FG KK +L EK ++ + LSD+WLD+E
Sbjct: 225 DKIQLPPTEERCETLKFLQNIDMFGERPQKKT-MEQLIKYEKEKEDNSILFLSDVWLDSE 283
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
VM +L+ + G++ + P + MGNF HP L + L+ F +L +I +P
Sbjct: 284 RVMERLDYLFGGYK--DCPPFAMILMGNFTEHP--LINGTQYQLKKYFNQLAMVIQKYPN 339
Query: 358 LKEHSRFLFIPGPDDAGPS--TVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + ++F+F+PGP D S +LP+ + ++ IP + F++NPCR+ +
Sbjct: 340 IHQFTQFIFVPGPTDPTGSLLNILPKFPISNVFIKDFISLIPKSTFTTNPCRIRY 394
>gi|405952640|gb|EKC20427.1| DNA polymerase epsilon subunit 2 [Crassostrea gigas]
Length = 505
Score = 226 bits (577), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 136/380 (35%), Positives = 210/380 (55%), Gaps = 24/380 (6%)
Query: 40 DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAF 99
DE +D +++ + + L+SS+I K + E AE + G + VIDAF
Sbjct: 24 DEILDKMIEIIQKQP-LQSSLIGKVACEAAVQ-----ECNAEQEEGD----NVFCVIDAF 73
Query: 100 LVPKFRYDSIKKHFYQHAG-SLP---IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF 155
VP++ Y + +K F Q++ LP +HG A K L+ DR+ +L QR R F+ P
Sbjct: 74 SVPRYTYSADRKKFIQNSTLGLPPPCLHGTAQDKVTLFLDRYTILQQRTQRHDLFTPPVI 133
Query: 156 DVVNSEFGS-CEISTIQSLVGQTGRR---WVMGVISQLEDGHFYLEDLAASVEIDLSKAK 211
E ++ I+ L+G T R V+G+++QL++G +Y+ED +V++DLS A
Sbjct: 134 GAEKDESAKKFQLKPIEYLLGSTARLGEIIVLGMLTQLKEGKWYVEDPTGAVQVDLSDAN 193
Query: 212 ITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKED 270
TG FTEN V+AEG D +F V GFPP E + +FFGG ++ +
Sbjct: 194 FHTGLFTENCFVLAEG-WYEDEVFHVNAFGFPPPEPAKVTRAYFGNINFFGGLSSICAKA 252
Query: 271 TLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP 330
+++L +E+ + MFV LSD+WLD +V+ KL V+ G+ + P+ F+ GNF S P
Sbjct: 253 SVKLKQVEQENRDAMFVFLSDVWLDQVKVIEKLRVLFTGYS--DFPPTCFILCGNFISAP 310
Query: 331 CNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTE 390
H LR F L +I P + E+SRF+F+PG D GPST+LPR +P +TE
Sbjct: 311 --QESHRAKVLRESFHSLIDLILEFPNIAENSRFIFVPGSQDPGPSTILPRPPIPNSITE 368
Query: 391 ELQKYIPNAIFSSNPCRLNF 410
E+++ +PN+ F+SNPCR+ +
Sbjct: 369 EVRRKLPNSTFTSNPCRIQY 388
>gi|395504200|ref|XP_003756444.1| PREDICTED: DNA polymerase epsilon subunit 2 [Sarcophilus harrisii]
Length = 525
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 137/418 (32%), Positives = 236/418 (56%), Gaps = 34/418 (8%)
Query: 8 KIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKESV 66
K+ K+RGY LR +A + + R P+ + ++A++ ++D E + L S++I++ V
Sbjct: 9 KVVSAFKLRGYLLRGEATKYLTEALERVPELKLEDALESIIDAVEKQP-LSSNMIERSVV 67
Query: 67 NRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHA----GSL 120
EAA + S S + +I AF VP F Y+ +K F + S
Sbjct: 68 ----------EAAVQECSQSVDETVEHILNIIGAFDVPHFVYNPERKKFLPLSMTSHSSP 117
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEISTIQSLVGQ 176
+ G+A KA ++R+R+ +L+QR R + F+ + D S+F ++ TI++L+G
Sbjct: 118 NLFGKARDKAEVFRERYTILWQRTQRHELFTPLATGAHPDESRSKF---QLKTIETLLGS 174
Query: 177 TGR---RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T R V+G+I+Q+++G ++LED +V+++LSKA+ +G +TE+ V+AEG D
Sbjct: 175 TARIGEVIVLGMITQMKEGKYFLEDPTGTVQLNLSKAQFHSGLYTESCFVLAEG-WFEDQ 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK-EDTLRLADLEKRAANDMFVILSDI 292
IF V GFPP+E + + +FFGG T + + +L LE+ + MFV++SD+
Sbjct: 234 IFHVNAFGFPPIEPSNTTRAYYGNVNFFGGPTSTSVKASAKLKHLEEENEDTMFVLVSDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL ++ G+ SV P+ F+F GNF S P + SL L +I
Sbjct: 294 WLDQVEVLEKLHIMFSGYSSVP--PTCFIFCGNFSSAP--YGKNHVQSLIDSLKALADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D GP ++LP+ L + +T + ++ +P ++F++NPCR+ +
Sbjct: 350 CDYPNIHQSSRFVFVPGPEDPGPGSILPKPPLAESITNDFRQRVPYSVFTTNPCRIQY 407
>gi|145349598|ref|XP_001419216.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579447|gb|ABO97509.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 432
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 119/302 (39%), Positives = 181/302 (59%), Gaps = 4/302 (1%)
Query: 113 FYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQS 172
F + + + I A +K LYRDRFLLL QR+SR + F++P+ ++E G E+++IQS
Sbjct: 2 FDEASKTAKIESAAESKIDLYRDRFLLLQQRLSRSRQFAKPTLQTSSTE-GIAELTSIQS 60
Query: 173 LVGQTGR-RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
L+G + +++MG +SQLED FY+EDL +V +DL+ + + G FTEN IV+A+GE+
Sbjct: 61 LLGVSKETKFIMGCLSQLEDERFYMEDLTGTVRVDLTACERSAGLFTENCIVIAQGEVRP 120
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG-TLKKEDTLRLADLEKRAANDMFVILS 290
DG+F+V+ FPP E R + DFFG G L+ + L + E + F++LS
Sbjct: 121 DGVFEVMALTFPPAETRAATRNATNALDFFGAGHILRPNELEELEEKELERVGERFIVLS 180
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEV-VPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG 349
D+WLD +L + D F+S E VP L VFMG+F S P + + F + F KL
Sbjct: 181 DVWLDQPRTFDRLAKMFDAFDSQEEDVPGLIVFMGDFTSKPFGPTHYDFRAYTEGFDKLA 240
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
+++ +PRL++ SRF+FIPGP D G + LPR L + L + +P A F+SNP ++
Sbjct: 241 ELLEEYPRLRQESRFVFIPGPGDPGLNAALPRPGLQSSVIGSLLEKVPRAQFASNPAKIR 300
Query: 410 FL 411
+
Sbjct: 301 YF 302
>gi|71895937|ref|NP_001025641.1| DNA-directed DNA polymerase epsilon 2 [Xenopus (Silurana)
tropicalis]
gi|60688343|gb|AAH91608.1| MGC97727 protein [Xenopus (Silurana) tropicalis]
Length = 527
Score = 226 bits (576), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 144/426 (33%), Positives = 233/426 (54%), Gaps = 38/426 (8%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKS 58
+ + + K+ K+ G LR +A L E+LS VN + ED ID ++D E + L S
Sbjct: 3 TDKLKSKVTSAFKMHGLLLRAEASKYLSEVLSSVNEV-ELED-VIDSIIDAVEKQP-LSS 59
Query: 59 SIIDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQ- 115
++I+K +V E A + S S +I AF +P++ Y+S +K F
Sbjct: 60 NMIEKSTV----------ETAVQECSRSCDETIEHIFNIIGAFDIPRYVYNSERKKFLPL 109
Query: 116 HAGSLP---IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEIS 168
+LP + G A KA L+R+R+ +L QR R + F+ P D S+F ++
Sbjct: 110 KMTTLPSPNLFGSARDKAELFRERYTILQQRTHRHELFTPPVIGAHPDESRSKF---QLK 166
Query: 169 TIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVA 225
T+++L+G T G V+G+I+QL++G +LED +V++DL+ A+ +G +TE+ V+A
Sbjct: 167 TVETLLGNTAKVGEVIVLGMITQLKEGKIFLEDPTGAVQLDLTNAQFHSGLYTESCFVLA 226
Query: 226 EGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAAND 284
EG D IF + GFPP E + +FFGG + + +++L LE+ +
Sbjct: 227 EG-WYEDKIFHINAFGFPPTEPSSTTRAYYGNMNFFGGPSSTSVKTSVKLRQLEEENEDA 285
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
MFV LSD+WLD EV KL + G+ + P+ F+F GNF S P + SL+
Sbjct: 286 MFVFLSDLWLDQVEVTEKLHTMFSGYSTAP--PTCFIFCGNFSSAP--YGKNHIRSLKDS 341
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
F L +I +P + + SRF+F+PGP+D GP +LPR + ++TEE ++ +P +IF++N
Sbjct: 342 FKILADIICEYPHIHKSSRFVFVPGPEDPGPGFILPRPPIADHITEEFRQRVPFSIFTTN 401
Query: 405 PCRLNF 410
PCR+ +
Sbjct: 402 PCRIQY 407
>gi|27545241|ref|NP_775353.1| DNA polymerase epsilon subunit 2 [Danio rerio]
gi|21105458|gb|AAM34672.1|AF506228_1 DNA polymerase epsilon subunit B [Danio rerio]
Length = 527
Score = 226 bits (575), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 139/419 (33%), Positives = 231/419 (55%), Gaps = 28/419 (6%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIID 62
+ ++K+ K+RG LR ++ +L + AE +E ++ +LD E + L SS++D
Sbjct: 5 RVKQKVNAGFKMRGLILRPESSRFLLQVLESVSPAELEEVLERVLDSVEKQP-LSSSMVD 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHAGS- 119
L EAA + S S +I AF VP+F + + +K F + +
Sbjct: 64 ----------LCVLEAAVQDCSQSCDETIDHVFNIIGAFDVPRFIFSTERKKFVPISMTN 113
Query: 120 --LP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSE-FGSCEISTIQSLVG 175
LP + G+A KA L+R+R+ +L QR R + F+ P E ++ T+++L+
Sbjct: 114 HPLPKLCGQARDKAELFRERYTILQQRTHRHELFTPPVIGSAQDEGRNKFQLKTVEALLC 173
Query: 176 QTGRR---WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
+ R V+G+I+QL +G FYLED + +V++D+SKA+ +G +TE+ V+AEG D
Sbjct: 174 SSARLGEVIVLGMITQLREGKFYLEDPSGTVQLDISKAQFHSGLYTESCFVLAEG-WYED 232
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSD 291
+F V GFPP E + +FFGG + + + +L LE+ + MFV++SD
Sbjct: 233 SVFHVSAFGFPPTEPSSFTRAYFGNVNFFGGPSSTAVKASAKLKQLEEENEDAMFVLVSD 292
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
+WLD+ EV+ K+ + G+ ++ P+ F+F G+F S P + SLR F L +
Sbjct: 293 VWLDSVEVLEKIHTMFSGYSALP--PTCFIFCGSFSSAPYGRT--QLRSLRDSFKALADL 348
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I P + SRF+F+PGP+D GP VLPR L +++TEE Q+ +P ++F++NPCR+ +
Sbjct: 349 ICEFPSIHSSSRFVFVPGPEDPGPGAVLPRPPLAEHITEEFQQRVPLSVFTTNPCRIQY 407
>gi|147907164|ref|NP_001083783.1| DNA-directed DNA polymerase epsilon 2 [Xenopus laevis]
gi|9988418|dbj|BAB12726.1| DNA polymerase epsilon subunit B [Xenopus laevis]
gi|66912072|gb|AAH97773.1| POLE2 protein [Xenopus laevis]
Length = 527
Score = 225 bits (574), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 141/426 (33%), Positives = 234/426 (54%), Gaps = 38/426 (8%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKS 58
+ + + K+ K+ G LR +A L E+LS VN + ED ID ++D E + L S
Sbjct: 3 TDKLKSKVSSAFKMHGLMLRAEASKYLSEVLSSVNEV-ELED-VIDSIIDAVEKQP-LSS 59
Query: 59 SIIDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQ- 115
++I+K +V EAA + S + +I AF +P++ Y+S +K F
Sbjct: 60 NMIEKSTV----------EAAVQECSRTCDETIEHIFNIIGAFDIPRYVYNSERKKFLPL 109
Query: 116 HAGSLP---IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEIS 168
+LP + G A KA L+R+R+ +L QR R + F+ P D S+F ++
Sbjct: 110 KMTTLPSPNLFGRARDKAELFRERYTILQQRTHRHELFTPPVIGSHPDESRSKF---QLK 166
Query: 169 TIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVA 225
T+++L+G T G V+G+I+Q+++G ++LED +V++DL+ A+ +G +TE+ V+A
Sbjct: 167 TVETLLGNTAKVGEVIVLGMITQMKEGKYFLEDPTGAVQLDLTNAQFHSGLYTESCFVLA 226
Query: 226 EGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAAND 284
EG D +F + GFPP E + +FFGG + + +++L LE+ +
Sbjct: 227 EG-WYEDKVFHINAFGFPPTEPSSTTRAYYGNMNFFGGPSSTSVKASVKLRQLEEENEDA 285
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
M V LSD+WLD EV KL + G+ + P+ F+F GNF S P + SL+
Sbjct: 286 MLVFLSDLWLDQVEVTEKLHTMFSGYSTAP--PTCFIFCGNFSSAP--YGKNHIQSLKDS 341
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
F L +I +P + + SRF+F+PGP+D GP +LPR + ++TEE ++ +P +IF++N
Sbjct: 342 FKILADIICEYPNIHKSSRFVFVPGPEDPGPGFILPRPPIADHITEEFRQRVPFSIFTTN 401
Query: 405 PCRLNF 410
PCR+ +
Sbjct: 402 PCRIQY 407
>gi|340374779|ref|XP_003385915.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Amphimedon
queenslandica]
Length = 520
Score = 224 bits (571), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 139/413 (33%), Positives = 221/413 (53%), Gaps = 22/413 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAED--EAIDLLLDQFEHESSLKSSIIDK 63
RK+I K++G L +A ++ ++ + D+ED + ID +++ + + LK S++DK
Sbjct: 4 RKRIVTDFKLQGLQLTNEATTFLVEVLDLYKDSEDLTQIIDDIIEAVQKQP-LKKSLLDK 62
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ-HAGSLPI 122
+ + E E DS A+ +I+AF P F Y+ +K F S+ +
Sbjct: 63 DVIETAVE-----ECNQETDSDP---DKALVLINAFETPPFTYNPDQKKFLPIPLPSMKL 114
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFG-SCEISTIQSLVGQTG--- 178
A+ K L+R+R+ L++QR R FS P S G + TI+ L+ +G
Sbjct: 115 FASATQKTKLFRERYNLIYQRTVRHHLFSPPVVGAAGSSKGPKFRLHTIEYLLSSSGLPD 174
Query: 179 RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
+ V+G++ QL + FYLEDL +E+DLS TG F EN+IV+AEG + DG+F +
Sbjct: 175 KIIVLGMLIQLRERKFYLEDLTGKIELDLSACLFHTGLFVENSIVLAEG-LFKDGVFHLS 233
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
G PP+E + +FFGG + + + +++L D+ K M V SD++LD++
Sbjct: 234 AIGCPPIESSAITRNYFGTVNFFGGPSPIAAKASVKLQDMLKGNQGVMLVFFSDLFLDDD 293
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
+V+ KL ++ G+ + P+ F+FMGNF S P H L+ F LG ++ +P
Sbjct: 294 KVLEKLPLLFSGYS--DFPPAAFIFMGNFSSTPYGADRHK--RLKDSFKALGDIMLNYPD 349
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
L E S+F F+PGP D GP +LPR +P YLT ++ I N F SNPCR+ F
Sbjct: 350 LLEKSQFFFVPGPLDPGPGDILPRPPIPSYLTSDITSRISNVTFCSNPCRIQF 402
>gi|432936708|ref|XP_004082240.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Oryzias latipes]
Length = 528
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 145/427 (33%), Positives = 231/427 (54%), Gaps = 44/427 (10%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ + K+ K+RG LR +A L E+L VN + ED I+ +LD E + L S++
Sbjct: 6 KIKAKVTAGFKMRGLILRPEASRYLAEVLESVN-VSELED-VIEKVLDSVEKQP-LSSNM 62
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHAG 118
I+ L E+A + + S + +I AF VP++ Y +K F
Sbjct: 63 IE----------LAVVESAVQDCTQSCDETIDNIFNIIGAFDVPRYIYSVERKKF----- 107
Query: 119 SLPIH----------GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEF-GSCEI 167
LPI+ G A KA L+R+R+ +L QR R + F+ P+ E ++
Sbjct: 108 -LPINMTGHPAPSLCGSAKDKAELFRERYTILQQRTHRHELFTPPAIGAAVEEGQNKFQL 166
Query: 168 STIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVV 224
TI++L+G T G V+G+I+QL++G FYLED + +V++DLSKA+ G +TE+ V+
Sbjct: 167 KTIEALLGSTSKLGEVIVLGMITQLKEGKFYLEDPSGTVQLDLSKAQFHNGLYTESCFVL 226
Query: 225 AEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAAN 283
AEG D + V GFPP E + +FFGG + + + +L LE+ +
Sbjct: 227 AEG-WYEDSVLHVNGFGFPPTEPSSATRSYYGNINFFGGPSSTSVKASSKLKQLEEENED 285
Query: 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRL 343
MFVI+SD+WLD+ EVM KL ++ G+ ++ P+ F+ GNF S P + + SL+
Sbjct: 286 AMFVIVSDVWLDSVEVMEKLNIMFSGYAAMP--PTCFILCGNFSSAPYGKTQNR--SLKE 341
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSS 403
L MI +P + SRF+F+PGP+D GP+ +LPR L + +TEE + +P ++F++
Sbjct: 342 SLKALADMICTYPSIHSSSRFVFVPGPEDPGPANILPRPPLVQNITEEFSERVPFSVFTT 401
Query: 404 NPCRLNF 410
NPCR+ +
Sbjct: 402 NPCRIQY 408
>gi|412993512|emb|CCO14023.1| predicted protein [Bathycoccus prasinos]
Length = 627
Score = 223 bits (567), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 191/337 (56%), Gaps = 18/337 (5%)
Query: 92 AIRVIDAFL-VPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
AI V DAF P+++YD + F + + EA +K +YR+RF LL QR+SR + F
Sbjct: 139 AIVVCDAFAHAPRYQYDETRNVFAKIDQPATMDAEADSKINVYRERFHLLRQRMSRHESF 198
Query: 151 SRPSF--------DVVNSEFGSCEISTIQSLVGQT-GRRWVMGVISQLEDGHFYLEDLAA 201
++P+F D + + E++ ++SLVGQ G R VMG +SQ+EDG F+LED
Sbjct: 199 TKPAFGKKKKGNEDASTNANNTNELTPLRSLVGQCYGPRVVMGCLSQVEDGIFHLEDPTG 258
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEML-VDGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
S+ IDL+ A T+G F EN +V+A GE+ DGIF+V G PP E R ++L+ DF
Sbjct: 259 SMRIDLTAAAATSGMFCENCVVIATGEVRKTDGIFEVSALGHPPAETRRKTLEATNATDF 318
Query: 261 FGGGTLKKEDTLRLADL------EKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE 314
G K LR DL EK+A ++ FV++SD +LD+ + + +L + + ++
Sbjct: 319 MGAAQGGKHVALRPRDLDELIKTEKKAKDERFVVISDCYLDDSKCLRRLRNIFEVYDQSP 378
Query: 315 VVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
P LFVFMG+F P + + F+S F +L ++ +P ++E RF+F+PGP D G
Sbjct: 379 KPPGLFVFMGDFTRVPFGPTKYDFASYTKSFDQLADLLDEYPSIREECRFVFVPGPGDPG 438
Query: 375 PSTVLPRCALPKYLT-EELQKYIPNAIFSSNPCRLNF 410
++ PR LP L ++ + F+SNPC++ +
Sbjct: 439 NTSAYPRPGLPAALRGHKITACLQKVEFASNPCKIRW 475
>gi|334310659|ref|XP_001378853.2| PREDICTED: DNA polymerase epsilon subunit 2 [Monodelphis domestica]
Length = 530
Score = 221 bits (563), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 136/420 (32%), Positives = 231/420 (55%), Gaps = 34/420 (8%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R K+ +RGY LR +A + + PD E D+ ++ ++D E + L S++I++
Sbjct: 7 RSKVVSAFNLRGYLLRGEATKYLTEALKLVPDLELDDTLENVIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHA----G 118
V EAA S S + +I AF +P F Y+ +K F +
Sbjct: 66 VV----------EAAVHECSQSVDETVEHILNIIGAFDIPHFVYNLERKKFLPLSMISHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEISTIQSLV 174
S + G+A KA ++R+R+ +L QR R + F+ + D S+F ++ TI++L+
Sbjct: 116 SPNLFGKARDKAEVFRERYTILQQRTQRHELFTPLATGAHPDESRSKF---QLKTIETLL 172
Query: 175 GQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
G T G V+G+I+Q+++ ++LED +V+++LSKA+ +G +TE+ V+AEG
Sbjct: 173 GSTAKIGEVIVLGMITQMKEWKYFLEDPTGTVQLNLSKAQFHSGLYTESCFVLAEG-WFE 231
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK-EDTLRLADLEKRAANDMFVILS 290
D +F V GFPP+E + +FFGG T + + +L LE+ + MFV++S
Sbjct: 232 DQVFHVNAFGFPPIEPSSTTRAYYGNVNFFGGPTSTSVKSSAKLKQLEEENEDTMFVLVS 291
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
D+WLD EV+ KL ++ G+ +V P+ F+F GNF S P + SL+ L
Sbjct: 292 DVWLDQVEVLEKLHIMFSGYSAVP--PTCFIFCGNFSSAP--YGKNHVQSLKDSLKALAD 347
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+I +P + + SRF+F+PGP+D GP ++LPR L + +T + ++ +P ++FS+NPCR+ +
Sbjct: 348 IICEYPNIHQSSRFVFVPGPEDPGPGSILPRPPLAESITNDFRQRVPFSVFSTNPCRIQY 407
>gi|355712641|gb|AES04416.1| polymerase , epsilon 2 [Mustela putorius furo]
Length = 519
Score = 220 bits (561), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 224/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 6 RSRAVSAFKLRGLLLRGEAIKYLTEALESISEVELEDALEKIIDAVEKQP-LSSNMIERS 64
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y S +K F +
Sbjct: 65 VV----------EAAVQECSQSVDETIEHIFNIIGAFDIPRFVYSSERKKFLPLLMTNHP 114
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ T+++L+G T
Sbjct: 115 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSYPDETGSKFQLKTVETLLGST 174
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +
Sbjct: 175 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDQV 233
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV +SD+W
Sbjct: 234 FHVNAFGFPPTEPSSTTRAYYGNVNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVW 293
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+GKL + G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 294 LDQGEVLGKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 349
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 350 EYPNIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 406
>gi|410962206|ref|XP_003987665.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Felis catus]
Length = 527
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 135/417 (32%), Positives = 227/417 (54%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 7 RNRAVTAFKLRGLLLRGEAVKYLTEALTPISEIELEDALEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSA--SNHSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S + +I AF +P+F Y S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETMDHIFNIIGAFDIPRFVYSSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+++L QR R + F+ P E GS ++ T+++L+G T
Sbjct: 116 APNLFGTARDKAELFRERYIILHQRTHRHELFTPPVIGSHPDETGSKFQLKTVETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++D+SKA+ +G +TE+ V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDISKAQFHSGLYTESCFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV +SD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+GKL + G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQGEVLGKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T+E ++ +P +IF++NPCR+ +
Sbjct: 351 EYPNIHQSSRFVFVPGPEDPGFGSILPRPPLAESITDEFRQRVPFSIFTTNPCRIQY 407
>gi|330796378|ref|XP_003286244.1| hypothetical protein DICPUDRAFT_77138 [Dictyostelium purpureum]
gi|325083749|gb|EGC37193.1| hypothetical protein DICPUDRAFT_77138 [Dictyostelium purpureum]
Length = 631
Score = 219 bits (559), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 138/418 (33%), Positives = 224/418 (53%), Gaps = 26/418 (6%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQ-FEH--ESSLK 57
M Q +K+I K + G + DA+ I++ + + + I LL+D+ +H ++ L
Sbjct: 1 MDIQWKKQITKSFSLVGLSTKADAMKLIINKIKS--EGHETNIALLIDEILKHLDKNQLN 58
Query: 58 SSIIDKESVNRVTSVL--LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
++IID+ ++ + ++ L + A E D A++VIDAF P F YD+ K F +
Sbjct: 59 NNIIDQIAIEKCFKLIESLNSSDAIEKD--------ALKVIDAFDSPLFTYDTNTKQFLK 110
Query: 116 HAG-SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174
+HG + +K+ +YR R+ ++ QR+ R + FS P ++ I+ + SL+
Sbjct: 111 CENFEKSLHGSSKSKSDVYRRRYQMVLQRIERAESFSAPVLQSDKNKGDYQAITPLSSLL 170
Query: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G GR+ ++G IS +E+ FY+EDL V+I++ I G T NTI+ A GE L +G
Sbjct: 171 GSYGRKHILGTISVIEEDQFYIEDLNTKVKIEIP-PDIEIGLITINTIIRASGEYL-EGT 228
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
F PP E+R+ SLKLL D FG KK TL + ++ ++ + LSDIWL
Sbjct: 229 FIADKIELPPKEEREISLKLLQNIDMFGERPQKK--TLEQLERYEKEVDNTILFLSDIWL 286
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354
D+E V +L+ + G+E E P V MGNF HP L + L+ F L +I
Sbjct: 287 DSERVRERLDYLFSGYE--EYPPFAIVLMGNFTEHP--LINGTQYDLKKNFNLLATLILK 342
Query: 355 HPRLKEHSRFLFIPGPDDAGPS--TVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + ++F+F+PGP D S +LP+ +P +E Q IP +IF++NPCR+ +
Sbjct: 343 YPNIHKFTQFIFVPGPTDPTGSLLNILPKLPIPNVFVKEFQSKIPKSIFTTNPCRIRY 400
>gi|348572137|ref|XP_003471850.1| PREDICTED: DNA polymerase epsilon subunit 2-like isoform 1 [Cavia
porcellus]
Length = 527
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 143/424 (33%), Positives = 224/424 (52%), Gaps = 38/424 (8%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ R + K+RG LR +A L E L VN + ED ++ ++D E + L S++
Sbjct: 5 RVRSRALSAFKLRGLLLRGEAIKYLTEALQSVNEL-ELED-TLEKIIDAVEKQP-LSSNM 61
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----Y 114
I++ +V E A + S SA +I AF VP+F Y S +K F
Sbjct: 62 IERSAV----------ETAVQECSRSAEETIEHIFNIIGAFDVPRFVYHSGRKKFLPLLM 111
Query: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEISTI 170
+ + G A KA LYR+R+ +L QR R + F+ P D + S+F ++ TI
Sbjct: 112 TNHPEPNLFGTARDKAELYRERYTILHQRTHRHELFTPPVVGSHPDAMGSKF---QLKTI 168
Query: 171 QSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEG 227
+SL+G T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG
Sbjct: 169 ESLLGSTTKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG 228
Query: 228 EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG-TLKKEDTLRLADLEKRAANDMF 286
D +F V GFPP E + +FFGG + + +L LE + MF
Sbjct: 229 -WFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPFNTSVKTSAKLKQLEDENKDAMF 287
Query: 287 VILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFG 346
V +SD+WLD EV+ KL + G+ P+ F+ GNF S P + +L+
Sbjct: 288 VFISDVWLDQVEVLEKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLK 343
Query: 347 KLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPC 406
L +I HP + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPC
Sbjct: 344 TLADIICEHPNIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPYSVFTTNPC 403
Query: 407 RLNF 410
R+ +
Sbjct: 404 RIQY 407
>gi|340386636|ref|XP_003391814.1| PREDICTED: DNA polymerase epsilon subunit 2-like, partial
[Amphimedon queenslandica]
Length = 421
Score = 218 bits (556), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 137/413 (33%), Positives = 219/413 (53%), Gaps = 22/413 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAED--EAIDLLLDQFEHESSLKSSIIDK 63
RK+I K++G L +A ++ ++ + D+ED + ID +++ + + LK S++DK
Sbjct: 4 RKRIVTDFKLQGLQLTNEATTFLVEVLDLYKDSEDLTQIIDDIIEAVQKQP-LKKSLLDK 62
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ-HAGSLPI 122
+ + E E DS A+ +I+AF P F Y+ +K F S+ +
Sbjct: 63 DVIETAVE-----ECNQETDSDP---DKALVLINAFETPPFTYNPDQKKFLPIPLPSMKL 114
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFG-SCEISTIQSLVGQTG--- 178
A K ++R+R+ L++QR R FS P S G + TI+ L+ +G
Sbjct: 115 FASALQKTKVFRERYNLIYQRTVRHHLFSPPVVGAAGSSKGPKFRLHTIEYLLSSSGLPD 174
Query: 179 RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
+ V+G++ QL + FYLEDL +E+DLS TG F EN+IV+AEG + DG+F +
Sbjct: 175 KIIVLGMLIQLRERKFYLEDLTGKIELDLSACLFHTGLFVENSIVLAEG-LFKDGVFHLS 233
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
G PP+E + +FFGG + + + +++L D+ K M V SD++LD++
Sbjct: 234 AIGCPPIESSAITRNYFGTVNFFGGPSPIAAKASVKLQDMLKGNQGVMLVFFSDLFLDDD 293
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
+V+ KL ++ G+ + P+ F+FMGNF S P H L+ F LG ++ +P
Sbjct: 294 KVLEKLPLLFSGYS--DFPPAAFIFMGNFSSTPYGADRHK--RLKDSFKALGDIMLNYPD 349
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
L E S+F F+PGP D GP +LPR +P LT ++ I N F SNPCR+ F
Sbjct: 350 LLEKSQFFFVPGPLDPGPGDILPRPPIPSCLTSDITSRISNVTFCSNPCRIQF 402
>gi|402876079|ref|XP_003901808.1| PREDICTED: DNA polymerase epsilon subunit 2 [Papio anubis]
Length = 502
Score = 217 bits (552), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 223/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E D+ ++ ++D E + L SS+I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELDDKLEKIIDAVEKQP-LSSSMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ T+++L+G T
Sbjct: 116 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTVETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPSP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|57529888|ref|NP_001006493.1| DNA polymerase epsilon subunit 2 [Gallus gallus]
gi|73919257|sp|Q5ZKQ6.1|DPOE2_CHICK RecName: Full=DNA polymerase epsilon subunit 2; AltName: Full=DNA
polymerase II subunit 2; AltName: Full=DNA polymerase
epsilon subunit B
gi|53130716|emb|CAG31687.1| hypothetical protein RCJMB04_9k18 [Gallus gallus]
Length = 527
Score = 216 bits (551), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 231/418 (55%), Gaps = 30/418 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R+++ ++RG LR +A+ + + + E ++ ID ++D E + L +++I+
Sbjct: 7 RRRLGSAFRVRGLLLRAEAVKYLTETLESLNEEEFEDVIDKIIDAVEKQP-LSTNMIELS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHA-GSLP 121
+V EAA + S + + +I AF +P++ Y+ +K F + +LP
Sbjct: 66 TV----------EAAVQECSQALDETIKNVFNIIGAFDIPRYIYNPDRKRFVPLSMTNLP 115
Query: 122 I---HGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSC--EISTIQSLVGQ 176
+ G A KA L+R+R+ +L QR R + F+ P+ V++ + ++ T+++L+G
Sbjct: 116 VPNLFGTARDKAELFRERYSILQQRTHRHELFT-PAAVVIHPDDNRSKFQLKTVETLLGN 174
Query: 177 TGRR---WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T + V+G+I+QL++G ++LED V++DLSKA+ +G +TE+ V+AEG D
Sbjct: 175 TAKVREVIVLGMITQLKEGKYFLEDPTGVVQLDLSKAQFHSGLYTESCFVLAEG-WYEDE 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDI 292
+F V GFPP E + +FFGG + + + +L LE + MFV LSD+
Sbjct: 234 VFHVNAFGFPPTEPSATTRAFYGNINFFGGPSSASVKASAKLKQLEDENEDAMFVFLSDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL + G+ S P+ F F GNF S P + SL+ L +I
Sbjct: 294 WLDQAEVLEKLHTMFSGYSSAP--PTCFFFCGNFSSAP--YGKNQIQSLKGSLKALADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D GP +VLPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 350 CEYPSIHKSSRFVFVPGPEDPGPGSVLPRPPLAENITQEFRQLVPFSVFTTNPCRVQY 407
>gi|281202149|gb|EFA76354.1| putative DNA polymerase epsilon subunit B [Polysphondylium pallidum
PN500]
Length = 650
Score = 216 bits (550), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 147/431 (34%), Positives = 226/431 (52%), Gaps = 51/431 (11%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDA-------------LDEILSFVNRFPDAEDEAIDLLL 47
M Q +K I K ++ G L+ DA L EI+S + + D L
Sbjct: 1 MDIQLKKNITKTFQLNGLILKKDAFTYLADLNESKEDLLEIVSIITKNIDKS-----TLT 55
Query: 48 DQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYD 107
+ + +L+ I D +S N +TS+ E D A++VIDAF P F +D
Sbjct: 56 GNYVDKLALEKCIKDIKSQNDITSI--------ESD--------ALKVIDAFSAPLFSFD 99
Query: 108 SIKKHFYQ-HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCE 166
K+ F + + +HG+A +KA L+R R+L + QRV R Q FS+P
Sbjct: 100 LAKRQFLKVEQPNRSLHGDAKSKADLFRRRYLSVLQRVERHQFFSKPVLPNEQQSRDYNS 159
Query: 167 ISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAE 226
I+ + SL+G G+++V+G ISQ+E+G +++EDL +V +D+ A +G TENTIV A
Sbjct: 160 ITPLNSLLGNPGKKYVLGTISQIEEGSYHIEDLNKNVPLDIENATF-SGLVTENTIVQAY 218
Query: 227 GEMLVDGIFQVITCGFPPLEDRDQSLKLLAGY-DFFGGGTLKKEDTL--RLADLEK--RA 281
GE LV+G+F P +E+R++SL+ L G D FG + D L RL + E+
Sbjct: 219 GE-LVNGVFVADEIMLPIVEEREESLRHLQGIGDMFGA---RPSDKLAARLLEYERDPDT 274
Query: 282 ANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSL 341
++ V LSD+WLD+ VM KL ++ G + E+ P F+FMGNF P L + L
Sbjct: 275 EDNALVFLSDVWLDSPMVMNKLNLLFYGHK--ELPPFAFIFMGNFTEKP--LIAGTQYKL 330
Query: 342 RLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS--TVLPRCALPKYLTEELQKYIPNA 399
+ F +L +I +P ++ S+F+FIPGP D S +LP+ +P + I NA
Sbjct: 331 KTYFDQLASLIQKYPTVQSKSKFIFIPGPTDPTGSLLNILPKFPIPDTFVRNFKNKISNA 390
Query: 400 IFSSNPCRLNF 410
IF++NPCR+ +
Sbjct: 391 IFTTNPCRIRY 401
>gi|355693254|gb|EHH27857.1| hypothetical protein EGK_18164 [Macaca mulatta]
Length = 527
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E D+ ++ ++D E + L SS+I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELDDKLEKIIDAVEKQP-LSSSMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSK + +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKDQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|157427892|ref|NP_001098853.1| DNA polymerase epsilon subunit 2 [Bos taurus]
gi|182645379|sp|A7YWS7.1|DPOE2_BOVIN RecName: Full=DNA polymerase epsilon subunit 2; AltName: Full=DNA
polymerase II subunit 2; AltName: Full=DNA polymerase
epsilon subunit B
gi|157279094|gb|AAI34763.1| POLE2 protein [Bos taurus]
Length = 527
Score = 215 bits (548), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 224/419 (53%), Gaps = 32/419 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + ED A++ ++D E + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEI-ELED-ALEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQH 116
+ V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 64 RSVV----------EAAVQECSQSVDETIDHIFNIIGAFDIPRFVYNSERKKFLPLLMTN 113
Query: 117 AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVG 175
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 114 HPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLG 173
Query: 176 QT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
T G V+G+I+QL++G F+LED ++++DLSKA+ +G +TE+ V+AEG D
Sbjct: 174 STSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFED 232
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSD 291
+F V GFPP E + +FFGG + T +L LE + MFV +SD
Sbjct: 233 QVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISD 292
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
+WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +
Sbjct: 293 VWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADI 348
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I +P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 349 ICGYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|350579062|ref|XP_003480516.1| PREDICTED: DNA polymerase epsilon subunit 2-like isoform 2 [Sus
scrofa]
Length = 527
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 221/417 (52%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++A++ ++D E + L S++I+K
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTGALQSINEVELEDALEKIIDAVEKQP-LSSNMIEKS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY---QHAGS 119
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHIFNIIGAFDIPRFVYNSERKKFLPLLMTSHP 115
Query: 120 LP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
P + G A KA L+R+R+ +L QR R + F+ P E GS ++ T+++L+G T
Sbjct: 116 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTVETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V +DLSKA+ +G +TE+ V+AEG D I
Sbjct: 176 SKIGDVIVLGMITQLKEGKFFLEDPTGTVPLDLSKAQFHSGLYTESCFVLAEG-WFEDQI 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE + MFV +SD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL + G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLHTMFSGYSPAP--PTCFILCGNFSSTP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPYSVFTTNPCRIQY 407
>gi|301773234|ref|XP_002922048.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Ailuropoda
melanoleuca]
Length = 591
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/409 (32%), Positives = 221/409 (54%), Gaps = 28/409 (6%)
Query: 14 KIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSV 72
K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++ V
Sbjct: 79 KLRGLLLRGEAIKYLTEALESISEVELEDTLEKIIDAVEKQP-LPSNMIERCVV------ 131
Query: 73 LLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAGSLPIHGEA 126
EAA + S S +I AF +P+F Y S +K F + + + G A
Sbjct: 132 ----EAAVQECSQSVDETIEHIFNIIGAFDIPRFVYSSERKKFLPLLMTNHPAPNLFGTA 187
Query: 127 SAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRRWV 182
KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T G V
Sbjct: 188 RDKAELFRERYTILHQRTHRHELFTPPVVGSHPDETGSKFQLKTIETLLGSTTKIGDVIV 247
Query: 183 MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGF 242
+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +F V GF
Sbjct: 248 LGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDQVFHVNAFGF 306
Query: 243 PPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEVMG 301
PP E + +FFGG + T +L LE+ + MFV +SD+WLD EV+G
Sbjct: 307 PPTEPSSTTRAYYGNVNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVWLDQGEVLG 366
Query: 302 KLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEH 361
KL + G+ P+ F+ GNF S P + +L+ L +I +P + +
Sbjct: 367 KLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPSIHQS 422
Query: 362 SRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 423 SRFVFVPGPEDPGFGSILPRPPLGESITSEFRQRVPFSVFTTNPCRIQY 471
>gi|296483213|tpg|DAA25328.1| TPA: DNA polymerase epsilon subunit 2 [Bos taurus]
Length = 527
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 224/419 (53%), Gaps = 32/419 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + ED A++ ++D E + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEI-ELED-ALEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQH 116
+ V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 64 RSVV----------EAAVQECSQSVDETIDHIFNIIGAFDIPRFVYNSERKKFLPLLMTN 113
Query: 117 AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVG 175
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 114 HPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLG 173
Query: 176 QT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
T G V+G+I+QL++G F+LED ++++DLSKA+ +G +TE+ V+AEG D
Sbjct: 174 STSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFED 232
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSD 291
+F V GFPP E + +FFGG + T +L LE + MFV +SD
Sbjct: 233 QVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISD 292
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
+WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +
Sbjct: 293 VWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADI 348
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I +P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 349 ICEYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|403277942|ref|XP_003930601.1| PREDICTED: DNA polymerase epsilon subunit 2 [Saimiri boliviensis
boliviensis]
Length = 505
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 10 RSRALSAFKLRGLLLRGEAIKYLTEALRSISELELEDKLEKIIDAVEKQP-LSSNMIERS 68
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P F Y+S +K F +
Sbjct: 69 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPHFVYNSERKKFLPLLMTNHP 118
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 119 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSNTDESGSKFQLKTIETLLGST 178
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G ++G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 179 TKIGDVIILGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 237
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 238 FHVNAFGFPPTEPSSTTRAYYGSINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 297
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 298 LDQVEVLEKLRIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 353
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 354 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 410
>gi|397523550|ref|XP_003831792.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Pan
paniscus]
gi|426376832|ref|XP_004055186.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Gorilla
gorilla gorilla]
Length = 527
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 224/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + + + +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|344273567|ref|XP_003408592.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Loxodonta
africana]
Length = 502
Score = 214 bits (546), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 136/417 (32%), Positives = 221/417 (52%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTDTLQSISELELEDALEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY---QHAGS 119
V EAA + S + +I AF P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQAVDETIDHIFNIIGAFDTPRFVYNSERKKFLPLLMTSHP 115
Query: 120 LP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
P + G A KA L+R+R+ +L QR R + F+ P +E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGCHPNESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHNGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE + MFV +SD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDSMFVFISDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL + G+ P+ F+ GNF S P + SL+ L +I
Sbjct: 295 LDQVEVLEKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQSLKDSLKSLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPNIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|426233090|ref|XP_004010550.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Ovis aries]
Length = 527
Score = 214 bits (544), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 138/419 (32%), Positives = 224/419 (53%), Gaps = 32/419 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + ED A++ ++D E + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEI-ELED-ALEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQH 116
+ V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 64 RSVV----------EAAVQECSQSVDETIDHIFNIIGAFDIPRFVYNSERKKFLPLLMTN 113
Query: 117 AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVG 175
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 114 HPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLG 173
Query: 176 QT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
T G V+G+I+QL++G F+LED ++++DLSKA+ +G +TE+ V+AEG D
Sbjct: 174 STSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFED 232
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSD 291
+F V GFPP E + +FFGG + T +L LE + MFV +SD
Sbjct: 233 QVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISD 292
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
+WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +
Sbjct: 293 VWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSVP--YGKNQVQALKDSLKTLADI 348
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I +P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 349 ICEYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|443721229|gb|ELU10622.1| hypothetical protein CAPTEDRAFT_182971 [Capitella teleta]
Length = 525
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 142/422 (33%), Positives = 219/422 (51%), Gaps = 27/422 (6%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEA-IDLLLDQFEHESSLKSS 59
MS R + K+ G LR DA + + + P +E EA ID L++ + + LKSS
Sbjct: 1 MSSSLRNQASTAFKMSGLTLRSDASNHMEEILRSLPSSEREAAIDRLIEAVQ-KKPLKSS 59
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA-- 117
++ K V+L+ G + VIDAF +PKF Y K F
Sbjct: 60 MVSK--------VILEEALNDCNQEGRENVDDVFNVIDAFSIPKFVYCKTSKKFLPADTV 111
Query: 118 --GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLV 174
G+ + E S K+ +Y +R+ L+ QR +R + F+ + ++ + ++ L+
Sbjct: 112 GDGTRSLFCEGSKKSEIYMNRYSLIHQRTARHELFTPAAIGSNPTDAAKKFVLKPVEFLL 171
Query: 175 GQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAK---ITTGFFTENTIVVAEGE 228
G T G V+G++SQL++G ++LED +V +DL++A ++ FTE + V+AEG
Sbjct: 172 GSTAKLGEIIVLGMLSQLKEGKWFLEDNTGAVPLDLARAISFFVSIWLFTEFSFVLAEG- 230
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVI 288
DG+F V GFPP E + +FFGG + + L +E+ + M VI
Sbjct: 231 CYEDGVFHVNAFGFPPPELAKTTRSFFGSVNFFGGCQEINKSS-NLLQIERDNEDGMMVI 289
Query: 289 LSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKL 348
LSD+WLD +VM KL+V+ G+ EV P F+ GNF S P + L F L
Sbjct: 290 LSDVWLDEAKVMDKLQVLFQGYS--EVPPICFILCGNFLSKPYGEDHND--RLIEAFNAL 345
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRL 408
G +++A+ L S+F+F+PGP D GP ++LPR L LTE + K+IP AIF+SNPCR+
Sbjct: 346 GDILSAYTDLITQSKFIFVPGPKDPGPGSILPRPGLFSCLTEGITKHIPGAIFASNPCRI 405
Query: 409 NF 410
+
Sbjct: 406 QY 407
>gi|449279778|gb|EMC87254.1| DNA polymerase epsilon subunit 2 [Columba livia]
Length = 509
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 136/403 (33%), Positives = 217/403 (53%), Gaps = 31/403 (7%)
Query: 23 DALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAE 81
DAL + +AE D+ I+ ++D E + L S +I++ +V EAA +
Sbjct: 8 DALKYLTEAFQSISEAELDDTIENVIDAVEKQP-LSSDMIEQCTV----------EAAVQ 56
Query: 82 GDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFYQHA-GSLPI---HGEASAKAALYRD 135
S +A + +I AF +P++ Y+S +K F + + P+ G A KA L+R+
Sbjct: 57 ECSQAADETIENVFNIIGAFDIPRYVYNSERKKFLPLSMTNFPVPSLFGTARDKAELFRE 116
Query: 136 RFLLLFQRVSRDQHFSRPSFDV-VNSEFGSCEISTIQSLVGQT---GRRWVMGVISQLED 191
R+ +L QR R + FS P+ N ++ TI++L+G T G V+G+I+QL++
Sbjct: 117 RYSILQQRTHRHELFSPPAVVAHPNDSTSKFQLKTIETLLGNTAKVGEVIVLGMITQLKE 176
Query: 192 GHFYLEDLAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDR 248
G F+LED V++DL++ T +G +TE+ V+AEG D +F V GFPP E
Sbjct: 177 GKFFLEDPTGVVQLDLTQCPFTFRPSGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPS 235
Query: 249 DQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVL 307
+ +FFGG + + + +L LE + MFV LSD+WLD EV+ KL +
Sbjct: 236 ATTRAFYGNVNFFGGPSSASVKASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMF 295
Query: 308 DGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFI 367
G+ S P+ F F GNF S P + SL+ L +I HP + + SRF+F+
Sbjct: 296 SGYSSAP--PTCFFFCGNFSSAP--YGKNHVQSLKGSLKALADVICEHPSIHKSSRFVFV 351
Query: 368 PGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
PGP+D GP ++LPR L +TEE ++ +P ++F++NPCR+ +
Sbjct: 352 PGPEDPGPGSILPRPPLADNITEEFRQLVPFSVFTTNPCRIQY 394
>gi|410254140|gb|JAA15037.1| polymerase (DNA directed), epsilon 2 (p59 subunit) [Pan
troglodytes]
Length = 527
Score = 213 bits (543), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 223/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGIT 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|114652887|ref|XP_509931.2| PREDICTED: DNA polymerase epsilon subunit 2 isoform 3 [Pan
troglodytes]
Length = 527
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 223/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGIT 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|73962858|ref|XP_851216.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Canis lupus
familiaris]
Length = 527
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 134/417 (32%), Positives = 223/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R ++ K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 7 RSRMVSAFKLRGLLLRGEAIKYLTEALESISEVELEDALEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSG--SASNHSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S + +I AF +P+F Y S +K F +
Sbjct: 66 VV----------EAAVQECSQLVDETIEHIFNIIGAFDIPRFVYSSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+ +R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAELFLERYTILHQRTHRHELFTPPVIGSHPDETGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +
Sbjct: 176 AKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDRV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV +SD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNVNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL + G+ P+ F+ GNF S P S +L+ L +I
Sbjct: 295 LDQGEVLRKLHTMFSGYSPAP--PTCFIMCGNFSSAPYGKS--QIQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+FIPGP+D G ++LPR + + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPNIHQSSRFVFIPGPEDPGFGSILPRPPIAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|281182710|ref|NP_001162579.1| polymerase (DNA directed), epsilon 2 [Rattus norvegicus]
Length = 527
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 223/420 (53%), Gaps = 34/420 (8%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L V +E ++ ++D E + L S++I+
Sbjct: 7 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTE--LELEENLEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----Q 115
+ V EAA + S S +I AF +P F Y+S +K F
Sbjct: 64 RSVV----------EAAVQECSQSVDETIEHIFNIIGAFDIPHFIYNSERKKFLPLSMTN 113
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLV 174
HA I G A KA LYR+R+ +L QR R + F+ P E GS ++ TI++L+
Sbjct: 114 HAAPT-IFGTARDKAELYRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLL 172
Query: 175 GQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
G T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG
Sbjct: 173 GSTSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-CFE 231
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLADLEKRAANDMFVILS 290
D +F GFPP E + +FFGG + + + +L LE+ + MFVI+S
Sbjct: 232 DQVFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKASAKLRQLEEENKDAMFVIVS 291
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
D+WLD +V+ KL V+ G+ P+ F+ GNF S P + +L+ L
Sbjct: 292 DVWLDQVQVLEKLHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLAD 347
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+I +P + + SRF+F+PGP+D G ++LPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 348 IICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQY 407
>gi|39793893|gb|AAH63772.1| Polymerase (DNA directed), epsilon 2 (p59 subunit) [Mus musculus]
Length = 527
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 219/418 (52%), Gaps = 30/418 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A + + + E +E + ++D E + L S++I++
Sbjct: 7 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
V EAA + S S +I AF +P+F Y+S +K F HA
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHA 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA LY +R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 116 APT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGS 174
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D
Sbjct: 175 TSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQ 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RLADLEKRAANDMFVILSDI 292
+F GFPP E + +FFGG + T +L LE + MFVI+SD+
Sbjct: 234 VFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKDAMFVIVSDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD +V+ K V+ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 294 WLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 350 CEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQY 407
>gi|74182250|dbj|BAE42782.1| unnamed protein product [Mus musculus]
Length = 527
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 219/418 (52%), Gaps = 30/418 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A + + + E +E + ++D E + L S++I++
Sbjct: 7 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
V EAA + S S +I AF +P+F Y+S +K F HA
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHA 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA LY +R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 116 APT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGS 174
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D
Sbjct: 175 TSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQ 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RLADLEKRAANDMFVILSDI 292
+F GFPP E + +FFGG + T +L LE + MFVI+SD+
Sbjct: 234 VFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKDAMFVIVSDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD +V+ K V+ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 294 WLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 350 CEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQY 407
>gi|33468927|ref|NP_035263.1| DNA polymerase epsilon subunit 2 [Mus musculus]
gi|73920202|sp|O54956.2|DPOE2_MOUSE RecName: Full=DNA polymerase epsilon subunit 2; AltName: Full=DNA
polymerase II subunit 2; AltName: Full=DNA polymerase
epsilon subunit B
gi|26346464|dbj|BAC36883.1| unnamed protein product [Mus musculus]
Length = 527
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 219/418 (52%), Gaps = 30/418 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A + + + E +E + ++D E + L S++I++
Sbjct: 7 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
V EAA + S S +I AF +P+F Y+S +K F HA
Sbjct: 66 VV----------EAAVQECSQSMDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHA 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA LY +R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 116 APT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGS 174
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D
Sbjct: 175 TSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQ 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RLADLEKRAANDMFVILSDI 292
+F GFPP E + +FFGG + T +L LE + MFVI+SD+
Sbjct: 234 VFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKDAMFVIVSDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD +V+ K V+ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 294 WLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 350 CEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQY 407
>gi|2832262|gb|AAC40045.1| DNA polymerase epsilon small subunit [Mus musculus]
Length = 526
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 136/418 (32%), Positives = 219/418 (52%), Gaps = 30/418 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A + + + E +E + ++D E + L S++I++
Sbjct: 6 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQP-LSSNMIERS 64
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
V EAA + S S +I AF +P+F Y+S +K F HA
Sbjct: 65 VV----------EAAVQECSQSMDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHA 114
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA LY +R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 115 APT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGS 173
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D
Sbjct: 174 TSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQ 232
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RLADLEKRAANDMFVILSDI 292
+F GFPP E + +FFGG + T +L LE + MFVI+SD+
Sbjct: 233 VFHANAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTYTKLRQLEDENKDAMFVIVSDV 292
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD +V+ K V+ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 293 WLDQVQVLEKFHVMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLADII 348
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 349 CEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRVPFSVFTTNPCRIQY 406
>gi|320163097|gb|EFW39996.1| DNA polymerase epsilon subunit 2 [Capsaspora owczarzaki ATCC 30864]
Length = 599
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 137/445 (30%), Positives = 228/445 (51%), Gaps = 47/445 (10%)
Query: 3 GQTRKKIQKKMKIRGYGLRMDALDEI-LSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
+ R +I K+ G L+ +++ I + + P D + +L E + L SS++
Sbjct: 38 ARLRARIVAAFKLTGLALKAESVKLIQTALIPLSPFEWDAKLGEILRALERRT-LDSSVV 96
Query: 62 DKESVNRV------------TSVLLQAEAAAEGDSGSASNHSA------IRVIDAFLVPK 103
D SV RV T++ + A + + SN +A + IDAF VPK
Sbjct: 97 DGPSVQRVLDDLAFESVLAPTTMSTSYQGHARSNGANVSNIAASSMDRLLTCIDAFSVPK 156
Query: 104 FRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP---------- 153
Y++ +K F + +H +A++KAA+Y DRF LL QR R +HF +P
Sbjct: 157 LAYNADRKTFQLVPSNPMLHSDAASKAAIYADRFALLKQRTLRAEHFLQPIVVTHVPSSG 216
Query: 154 ---SFDVVNSEFGSCEISTIQSLVGQTGRR----WVMGVISQLEDGHFYLEDLAASVEID 206
+F+ F ++ + +L+G + G+++Q+E+G +LED +++E+D
Sbjct: 217 ADDAFEQKQERFS---LTPLDALIGAAEKDLQNLMTFGMLTQMEEGKLFLEDAGSTIELD 273
Query: 207 LSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGT 265
LS+ ++ TG FTEN V+ EGE+ V + + G P E R+ + K + +FFGG
Sbjct: 274 LSQLEEVLTGIFTENCFVLTEGEV-VGKVLKARWIGLPASESRETARKNFSAVNFFGGN- 331
Query: 266 LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGN 325
+D + LE++ + FV+LSD+WLD + M KL V+ G+ S P F+ +G+
Sbjct: 332 YSIQDAPQYKVLERQNEDAFFVVLSDVWLDQPKTMEKLRVLFTGYASSP--PVAFILIGD 389
Query: 326 FCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALP 385
F S P + L+ +LG+++A ++K SRF+F+PG +D GP +LPR L
Sbjct: 390 FTSPPYGRNHAPL--LKQCLTQLGKLVAEFSQIKRKSRFVFVPGNNDPGPGNILPRPGLS 447
Query: 386 KYLTEELQKYIPNAIFSSNPCRLNF 410
+TE ++ +PN F SNPCRL +
Sbjct: 448 ASITEGFRELVPNVEFGSNPCRLRY 472
>gi|32189369|ref|NP_002683.2| DNA polymerase epsilon subunit 2 isoform 1 [Homo sapiens]
gi|3915676|sp|P56282.2|DPOE2_HUMAN RecName: Full=DNA polymerase epsilon subunit 2; AltName: Full=DNA
polymerase II subunit 2; AltName: Full=DNA polymerase
epsilon subunit B
gi|14701864|gb|AAK72254.1|AF387034_1 DNA polymerase epsilon subunit B [Homo sapiens]
gi|2832260|gb|AAC39610.1| DNA polymerase epsilon small subunit [Homo sapiens]
gi|116496653|gb|AAI26221.1| Polymerase (DNA directed), epsilon 2 (p59 subunit) [Homo sapiens]
gi|116497139|gb|AAI26219.1| Polymerase (DNA directed), epsilon 2 (p59 subunit) [Homo sapiens]
gi|133923373|gb|ABO43040.1| polymerase (DNA directed), epsilon 2 (p59 subunit) [Homo sapiens]
gi|307686307|dbj|BAJ21084.1| polymerase (DNA directed), epsilon 2 [synthetic construct]
gi|313883442|gb|ADR83207.1| polymerase (DNA directed), epsilon 2 (p59 subunit) [synthetic
construct]
Length = 527
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ +++ E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|309747081|ref|NP_001184260.1| DNA polymerase epsilon subunit 2 isoform 3 [Homo sapiens]
gi|133777480|gb|AAI12963.1| POLE2 protein [Homo sapiens]
Length = 502
Score = 211 bits (537), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ +++ E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|332237020|ref|XP_003267698.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Nomascus
leucogenys]
Length = 527
Score = 211 bits (537), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQSSRFVFVPGPEDPEFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 407
>gi|354503955|ref|XP_003514045.1| PREDICTED: DNA polymerase epsilon subunit 2 [Cricetulus griseus]
Length = 569
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 141/420 (33%), Positives = 222/420 (52%), Gaps = 34/420 (8%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L+ V +E ++ ++D E + L S++I+
Sbjct: 49 RSRAVSAFKLRGLLLRGEATKYLTEALTSVTE--LELEETLEKIIDAVEKQP-LSSNMIE 105
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----Q 115
+ V EAA + S S +I AF +P F Y+S +K F
Sbjct: 106 RSVV----------EAAVQECSQSVDETIEHIFNIIGAFDIPHFVYNSERKKFLPLSMTN 155
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLV 174
HA + G A KA LYR+R+ +L QR R + F+ P E GS ++ TI++L+
Sbjct: 156 HAAPT-LFGTARDKAELYRERYTILHQRTHRHELFTPPVIGSHPEESGSKFQLKTIETLL 214
Query: 175 GQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
G T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG
Sbjct: 215 GSTAKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFE 273
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILS 290
D +F V GFPP E + +FFGG + T +L LE + MFV +S
Sbjct: 274 DQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTSAKLRQLEDENKDAMFVFVS 333
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
D+WLD +V+ KL ++ G+ P+ F+ GNF S P + +L+ L
Sbjct: 334 DVWLDQVQVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKSLAD 389
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+I +P + + SRF+F+PGP+D G ++LPR L + +T+E ++ IP ++F++NPCR+ +
Sbjct: 390 IICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEFRQRIPFSVFTTNPCRIQY 449
>gi|296214941|ref|XP_002753916.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 1 [Callithrix
jacchus]
Length = 530
Score = 210 bits (535), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 133/417 (31%), Positives = 222/417 (53%), Gaps = 28/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 10 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 68
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 69 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 118
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 119 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSNPDESGSKFQLKTIETLLGST 178
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG + +
Sbjct: 179 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEEQV 237
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 238 FHVNAFGFPPTEPSSTTRAYYGSINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 297
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 298 LDQVEVLEKLRIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 353
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+ GP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 354 EYPDIHQSSRFVFVSGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 410
>gi|338718008|ref|XP_001496330.3| PREDICTED: DNA polymerase epsilon subunit 2-like [Equus caballus]
Length = 509
Score = 210 bits (534), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 128/382 (33%), Positives = 209/382 (54%), Gaps = 27/382 (7%)
Query: 40 DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVID 97
++A++ ++D E + L S++I++ +V EAA + S S +I
Sbjct: 24 EDALEKIIDAVEKQP-LSSNMIERSAV----------EAAVQECSQSVDETIEHIFNIIG 72
Query: 98 AFLVPKFRYDSIKKHF----YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
AF +P+F Y+S +K F + + + G A KA L+R+R+ +L QR R + F+ P
Sbjct: 73 AFDIPRFVYNSERKKFLPLLMTNHPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPP 132
Query: 154 SFDVVNSEFGS-CEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSK 209
E GS ++ TI++L+G T G V+G+I+QL++G F+LED +V++DLSK
Sbjct: 133 VIGSHPDESGSKFQLKTIETLLGSTTKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSK 192
Query: 210 AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKE 269
A+ +G +TE+ V+AEG D +F V GFPP E + +FFGG +
Sbjct: 193 AQFHSGLYTESCFVLAEG-WFEDQVFHVSAFGFPPTEPSSITRAYYGNINFFGGPSNTSV 251
Query: 270 DT-LRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCS 328
T +L LE + MFV LSD+WLD EV+ KL + G+ P+ F+ GNF S
Sbjct: 252 KTSAKLKQLEDENKDAMFVFLSDVWLDQVEVLEKLHTMFSGYSPAP--PTCFILCGNFSS 309
Query: 329 HPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYL 388
P + +L+ L +I +P + + SRF+F+PGP+D G ++LPR L + +
Sbjct: 310 AP--YGKNQVQALKDSLKTLADIICEYPNIHQSSRFVFVPGPEDPGFGSILPRPPLAESV 367
Query: 389 TEELQKYIPNAIFSSNPCRLNF 410
T E ++ +P ++F++NPCR+ +
Sbjct: 368 TSEFRQRVPFSVFTTNPCRIQY 389
>gi|149410475|ref|XP_001515002.1| PREDICTED: DNA polymerase epsilon subunit 2 [Ornithorhynchus
anatinus]
Length = 535
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 209/380 (55%), Gaps = 24/380 (6%)
Query: 47 LDQFEHESSLKSSI--IDKE--SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVP 102
+++ E E +L+S I ++K+ S N + +++ S + +I A+ +P
Sbjct: 44 INELELEDALESVIDAVEKQPLSSNMIERSVVEIAVQECSQSVDEAIEHIFNIIGAYDIP 103
Query: 103 KFRYDSIKKHF----YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF--- 155
+F Y S +K F + S + G A KA L+R+R+ +L QR R + F+ P
Sbjct: 104 RFVYSSERKKFLPLSMTNHPSPNLFGTARDKAELFRERYTILQQRTHRHELFTPPVIGAH 163
Query: 156 -DVVNSEFGSCEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAK 211
D S+F ++ TI++L+G T G V+G+I+QL++G F+LED +V++DLSKA+
Sbjct: 164 PDESRSKF---QLKTIETLLGSTAKIGELIVLGMITQLKEGKFFLEDPTGAVQLDLSKAQ 220
Query: 212 ITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKED 270
+G +T++ V+AEG D +F V GFPP E + +FFGG + +
Sbjct: 221 FHSGLYTDSCYVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSSTSVKT 279
Query: 271 TLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP 330
+ +L LE + MFV LSD+WLD EV+ KL + G+ S+ P+ F+F GNF S P
Sbjct: 280 SAKLKQLEDENEDAMFVFLSDVWLDQVEVLEKLHTMFSGYSSLP--PTCFIFCGNFSSAP 337
Query: 331 CNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTE 390
+ +L+ L +I +P + + SRF+F+PGP+D GP +LPR L + +
Sbjct: 338 --YGKNQVQALKDSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGFILPRPPLAENIIN 395
Query: 391 ELQKYIPNAIFSSNPCRLNF 410
E ++ +P ++F++NPCR+ +
Sbjct: 396 EFKQRVPFSVFTTNPCRIQY 415
>gi|326921269|ref|XP_003206884.1| PREDICTED: DNA polymerase epsilon subunit 2-like, partial
[Meleagris gallopavo]
Length = 504
Score = 209 bits (531), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 127/383 (33%), Positives = 214/383 (55%), Gaps = 29/383 (7%)
Query: 40 DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVID 97
++ ID ++D E + L +++I+ +V EAA + S ++ + +I
Sbjct: 19 EDVIDRIIDAVEKQP-LSTNMIELPTV----------EAAVQECSQASDETIENVFNIIG 67
Query: 98 AFLVPKFRYDSIKKHFYQHA-GSLPI---HGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
AF +P++ Y S +K F + + P+ G A KA L+R+R+ +L QR R + F+ P
Sbjct: 68 AFDIPRYIYSSERKRFLPLSMTNFPVPNLFGTARDKAELFRERYSILQQRTHRHELFT-P 126
Query: 154 SFDVVNSEFGSC--EISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLS 208
+ VV+ + ++ T+++L+G T G V+G+I+QL++G ++LED V++DLS
Sbjct: 127 AAVVVHPDDSRSKFQLKTVETLLGNTVKVGEVIVLGMITQLKEGKYFLEDPTGVVQLDLS 186
Query: 209 KAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK 268
+A+ +G +TE+ V+AEG D +F V GFPP E + +FFGG +
Sbjct: 187 QAQFHSGLYTESCFVLAEG-WYEDEVFHVNAFGFPPTEPSATTRAFYGNINFFGGPSSNS 245
Query: 269 -EDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
+ + +L LE + MFV LSD+WLD EV+ KL + G+ S P+ F F GNF
Sbjct: 246 VKASAKLKQLEDENEDAMFVFLSDVWLDQAEVLEKLHTMFSGYSSAP--PTCFFFCGNFS 303
Query: 328 SHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKY 387
S P + SL+ L +I +P + + SRF+F+PGP+D GP +VLPR L +
Sbjct: 304 SAP--YGKNQIQSLKGSLKALADIICEYPSIHKSSRFVFVPGPEDPGPGSVLPRPPLAEN 361
Query: 388 LTEELQKYIPNAIFSSNPCRLNF 410
+T+E ++ +P ++F++NPCR+ +
Sbjct: 362 ITQEFRQLVPFSVFTTNPCRIQY 384
>gi|327286643|ref|XP_003228039.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Anolis
carolinensis]
Length = 527
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 133/418 (31%), Positives = 220/418 (52%), Gaps = 30/418 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
+ K+ K+ G LR +A L E L N + ED I+ ++D E +
Sbjct: 7 KGKVSAAFKMHGLILRAEAAKYLTEALQSANEV-ELED-MIENIIDAVEKQPL------- 57
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
S N + +++A S + +I AF +P++ Y+S +K F H
Sbjct: 58 --SCNMIEKSMVEAAVLECSQSVDETMEHIFNIIGAFDIPRYIYNSERKKFLPLSMTNHP 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA ++R+R+++L QR R + F+ + + E S ++ TI++L+G
Sbjct: 116 PPC-LLGSARDKAEVFRERYIILQQRTHRHELFTPSAIGALPEEGRSKFQLKTIETLLGS 174
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
+ G V+G+I+QL++G F+LED V++D+SKA+ +G +TE+ V+ EG D
Sbjct: 175 SSRVGEVIVLGMITQLKEGKFFLEDPTGVVQLDISKAQFHSGLYTESCFVLTEG-WYEDE 233
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDI 292
+F V GFPP E + +FFGG + + + +L LE+ + MFV LSD+
Sbjct: 234 VFHVNAFGFPPTEPSATTRAYYGNANFFGGPSSTSVKASAKLKQLEEENEDTMFVFLSDV 293
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL ++ G+ +V P+ F F GNF S P + SL+ L +I
Sbjct: 294 WLDQVEVLEKLRLMFSGYSAVP--PTCFFFCGNFSSAP--YVKNQVQSLKDSLKALADII 349
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P + E SRF+F+PG +D GP ++LPR L + +T+E ++ +P ++FS+NPCR+ +
Sbjct: 350 CEFPSIHESSRFVFVPGSEDPGPGSILPRPPLTESITQEFREQVPGSVFSTNPCRVQY 407
>gi|224052013|ref|XP_002200478.1| PREDICTED: DNA polymerase epsilon subunit 2 [Taeniopygia guttata]
Length = 506
Score = 208 bits (530), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 120/355 (33%), Positives = 198/355 (55%), Gaps = 14/355 (3%)
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS-LP-- 121
S N + L++A + + + +I AF +P++ Y+S +K F + + LP
Sbjct: 37 SSNMIEQPLVEAAVQECSRAPDEAIENVFNIIGAFDIPRYIYNSERKKFLPLSMTDLPRP 96
Query: 122 -IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVG---Q 176
+ G A KA L+R+R+ +L QR R + FS D + S ++ T+++L+G +
Sbjct: 97 SLFGTAKDKAELFRERYSILQQRTHRHELFSPSPVDAHPDDGKSKFQLKTVETLLGNPAK 156
Query: 177 TGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQ 236
G V+G+I+QL++G F+LED V++DLSKA+ +G +TE++ V+AEG D +F
Sbjct: 157 VGEVIVLGMITQLKEGKFFLEDPTGVVQLDLSKAQFHSGLYTESSFVLAEG-WYEDEVFH 215
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLR-LADLEKRAANDMFVILSDIWLD 295
V GFPP E + +FFGG + L LE+ + MFV +SD+WLD
Sbjct: 216 VNAFGFPPTEPSATTRAFYGNINFFGGPSSSSVKASAKLKQLEEENEDAMFVFVSDVWLD 275
Query: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355
EV+ KL ++ G+ S P+ F F GNF S P + SL+ L +I +
Sbjct: 276 QAEVLEKLHIMFSGYSSAP--PTCFFFCGNFSSAP--YGKNQIQSLKGSLKALADIICEY 331
Query: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P + + SRF+F+PGP+D GP ++LPR L + +T+E ++ +P ++F++NPCR+ +
Sbjct: 332 PSIHKSSRFVFVPGPEDPGPGSILPRPPLAENITQEFRQLVPFSVFTTNPCRVQY 386
>gi|2697123|gb|AAC51920.1| DNA polymerase epsilon subunit B [Homo sapiens]
Length = 526
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 132/417 (31%), Positives = 222/417 (53%), Gaps = 29/417 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ +++ E + L S++I++
Sbjct: 7 RSRAPSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + T +L LE+ + MFV LSD+W
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVW 294
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 295 LDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIIC 350
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 351 EYPDIHQ-SRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 406
>gi|297297779|ref|XP_001095940.2| PREDICTED: DNA polymerase epsilon subunit 2 [Macaca mulatta]
Length = 549
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/366 (33%), Positives = 200/366 (54%), Gaps = 26/366 (7%)
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF 113
+ SS+I++ V EAA + S S +I AF +P+F Y+S +K F
Sbjct: 84 MSSSMIERSVV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKF 133
Query: 114 ----YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEIS 168
+ + + G A KA L+R+R+ +L QR R + F+ P E GS ++
Sbjct: 134 LPLLMTNHPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLK 193
Query: 169 TIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVA 225
TI++L+G T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+A
Sbjct: 194 TIETLLGSTTKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLA 253
Query: 226 EGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLADLEKRAAND 284
EG D +F V GFPP E + +FFGG + + + +L LE+ +
Sbjct: 254 EG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDA 312
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
MFV LSD+WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+
Sbjct: 313 MFVFLSDVWLDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDS 368
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
L +I +P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++N
Sbjct: 369 LKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTN 428
Query: 405 PCRLNF 410
PCR+ +
Sbjct: 429 PCRIQY 434
>gi|348684070|gb|EGZ23885.1| hypothetical protein PHYSODRAFT_478820 [Phytophthora sojae]
Length = 987
Score = 207 bits (526), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 123/361 (34%), Positives = 202/361 (55%), Gaps = 18/361 (4%)
Query: 54 SSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
S + +S++ E++ LL +AE D + I+V AF P+ +++ +
Sbjct: 505 SKMTTSVVTLEALESALDTLL--AVSAEND------YEQIQVFGAFDTPRLHFNTHNNSY 556
Query: 114 YQHAGS-LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNS-EFGSCEISTIQ 171
A + +H ++ L R+RF+ + RV R++ F+ PS V N+ E+ E+S I+
Sbjct: 557 ELKADAHRRLHAGPESRIQLLRNRFMSVDLRVKRNRLFAPPSVAVANTTEY--MELSRIE 614
Query: 172 SLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
SL+G +G R V+G++ Q E FYLED + + +DL+ A T G FT N +V+ EGE ++
Sbjct: 615 SLLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIVDLTNAAYTDGLFTINCVVLVEGE-VI 673
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSD 291
D + V + GFPP E ++ SL++L G D G + + ++ +LE + F++LS
Sbjct: 674 DDVLHVQSMGFPPPETKEASLEVLGGIDPLGV-EVSAQQREQIRELEASDHHATFIVLSA 732
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCN--LSFHSFSSLRLQFGKLG 349
++LD+ +VM KL+ + G ESV+ P+LF+ MG+F S +S LR +LG
Sbjct: 733 VYLDDPQVMSKLDELFQGLESVQ--PTLFILMGDFMSTSIGGGAGSNSLQDLREYLEELG 790
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
+I +P + E+SRF+ +PGP+D G S PR LP T EL + +PN S+NPCR+
Sbjct: 791 NLILKYPGIAENSRFVLVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIR 850
Query: 410 F 410
+
Sbjct: 851 Y 851
>gi|431893721|gb|ELK03542.1| DNA polymerase epsilon subunit 2 [Pteropus alecto]
Length = 535
Score = 206 bits (524), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 135/425 (31%), Positives = 222/425 (52%), Gaps = 36/425 (8%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R++ K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 7 RRRALSAFKLRGLLLRGEAVKYLTEALQSISEVELEDALEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHIFNIIGAFDIPRFIYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA--------KITTGFFTENTIVVAE 226
G V+G+I+QL++G F+LED +V++DL + +G +TE+ V+AE
Sbjct: 176 SKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLRIKLFSSTVIYQFHSGLYTESCFVLAE 235
Query: 227 GEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDM 285
G D +F V GFPP E + + +FFGG + T +L LE + M
Sbjct: 236 G-WFEDQVFHVNAFGFPPTEPSNTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAM 294
Query: 286 FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQF 345
FV +SD+WLD EV+ KL + G+ V P+ F+ GNF S P + +L+
Sbjct: 295 FVFISDVWLDQVEVLEKLHTMFSGYSPVP--PTCFILCGNFSSAPYGT--NQVQALKDSL 350
Query: 346 GKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNP 405
L +I +P + + SRF+F+PGP+D G ++LPR L +T E ++ IP ++F++NP
Sbjct: 351 KTLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLADSITNEFRQRIPFSVFTTNP 410
Query: 406 CRLNF 410
CR+ F
Sbjct: 411 CRIQF 415
>gi|47229998|emb|CAG10412.1| unnamed protein product [Tetraodon nigroviridis]
Length = 560
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/461 (31%), Positives = 231/461 (50%), Gaps = 78/461 (16%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ + ++ K+RG LR +A L E+L V P ++ I+ +LD E + L S++
Sbjct: 4 RIKSRVSAAFKMRGLVLRPEASKYLVEVLESVG--PSELEDVIEKVLDAVEKQP-LSSNM 60
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLV-------PKFRYD------ 107
I+ V E+A + S S ID FL+ P+F
Sbjct: 61 IELSVV----------ESAVQDCSQSCD-----ETIDNFLISLEPLMCPRFMNSLSFFAP 105
Query: 108 SIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDV-VNSEFGSCE 166
+ + H H + G A KA L+R+R+ +L QR+ R + F+ P+ V +
Sbjct: 106 TFRLHMTTHPAP-SLCGLAKDKAELFRERYTILQQRIHRHELFTPPAIGTGVEEGENKFQ 164
Query: 167 ISTIQSLVGQT---GRRWVMGVISQLED-----------------------------GHF 194
+ TI++L+G T G V+G+I+QL++ G F
Sbjct: 165 LKTIEALLGSTAKMGEVIVLGMITQLKEVSSSERQDGNDTLVCVTFSFLNYFFISFKGKF 224
Query: 195 YLEDLAASVEIDLSKA----KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQ 250
YLED + +V++D+SKA + G +T++ V+AEG D +F V GFPP E
Sbjct: 225 YLEDPSGTVQLDMSKAIRLHQFHNGLYTDSCFVLAEG-WYEDSVFHVNGFGFPPTEPSSA 283
Query: 251 SLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDG 309
+ +FFGG + + + +L LE+ + MFVI+SD+WLD+ EV+ KL ++L G
Sbjct: 284 TRAYYGNMNFFGGPSSTSVKASAKLKQLEEENEDAMFVIISDVWLDDVEVLEKLNLMLSG 343
Query: 310 FESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPG 369
+ S+ P+ F+F+GNF P + SL+ L +I AHP + SRFLF+PG
Sbjct: 344 YSSMP--PTCFIFIGNFSRAPYGNT--QIKSLKDSLRALADIICAHPNIHNSSRFLFVPG 399
Query: 370 PDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P+D GP T+LPR L ++TEE ++ +P ++F++NPCR+ +
Sbjct: 400 PEDPGPGTILPRPPLANHITEEFRQRVPFSVFTTNPCRVQY 440
>gi|301114509|ref|XP_002999024.1| DNA polymerase epsilon subunit, putative [Phytophthora infestans
T30-4]
gi|262111118|gb|EEY69170.1| DNA polymerase epsilon subunit, putative [Phytophthora infestans
T30-4]
Length = 982
Score = 203 bits (516), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 125/360 (34%), Positives = 197/360 (54%), Gaps = 16/360 (4%)
Query: 54 SSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
S + SS++ E++ LL +AE D + I+V AF P+ ++ +
Sbjct: 501 SKMTSSVVTLEALESALDTLL--AVSAEND------YEQIQVFGAFDTPRLHFNMHNNSY 552
Query: 114 YQHAGS-LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQS 172
A + +H A+ L R+RF+ + RV R++ F+ S V N+ E+S I+S
Sbjct: 553 DLRADTHRRLHAGPEARIQLLRNRFMSVDLRVKRNRLFAPLSAAVANT-IEYMELSRIES 611
Query: 173 LVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
L+G +G R V+G++ Q E FYLED + + IDL+ A T G FT N +V+ EGE ++D
Sbjct: 612 LLGVSGVRRVIGMLGQDERKRFYLEDFTSRIIIDLTNAAYTDGLFTINCVVLVEGE-VID 670
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDI 292
+ V + GFPP E ++ SL++L G D G + + ++ +LE + F++LSD+
Sbjct: 671 DVLHVQSMGFPPPETKEASLEVLGGIDPLGV-EVSAQQREQIRELEASDHHAAFIVLSDV 729
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCN--LSFHSFSSLRLQFGKLGQ 350
LD+ VM KL+ + G ESV+ P+LF+ MG+F S +S LR +LG
Sbjct: 730 HLDDPLVMSKLDELFQGLESVQ--PTLFILMGDFMSTSIGGGAGSNSLQDLREYLEELGS 787
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+I +P + E+SRF+ +PGP+D G S PR LP T EL + +PN S+NPCR+ +
Sbjct: 788 LILKYPGIAENSRFILVPGPNDPGSSRAFPRHPLPDLCTRELIRKVPNVTCSTNPCRIRY 847
>gi|440907239|gb|ELR57408.1| DNA polymerase epsilon subunit 2 [Bos grunniens mutus]
Length = 533
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 221/425 (52%), Gaps = 38/425 (8%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + ED A++ ++D E + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEI-ELED-ALEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQH 116
+ V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 64 RSVV----------EAAVQECSQSVDETIDHIFNIIGAFDIPRFVYNSERKKFLPLLMTN 113
Query: 117 AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVG 175
+ + G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 114 HPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLG 173
Query: 176 QT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITT------GFFTENTIVVAE 226
T G V+G+I+QL++G F+LED ++++DL + T G +TE+ V+AE
Sbjct: 174 STSKIGDVIVLGMITQLKEGKFFLEDPTGTIQLDLKLFSLITVYQFHSGLYTESCFVLAE 233
Query: 227 GEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDM 285
G D +F V GFPP E + +FFGG + T +L LE + M
Sbjct: 234 G-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNTNFFGGPSNTSVKTSAKLKQLEDENKDAM 292
Query: 286 FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQF 345
FV +SD+WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+
Sbjct: 293 FVFISDVWLDQVEVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSL 348
Query: 346 GKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNP 405
L +I +P + + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NP
Sbjct: 349 KTLADIICEYPNIHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNP 408
Query: 406 CRLNF 410
CR+ +
Sbjct: 409 CRIQY 413
>gi|410962208|ref|XP_003987666.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Felis catus]
Length = 501
Score = 202 bits (515), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 128/411 (31%), Positives = 215/411 (52%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 7 RNRAVTAFKLRGLLLRGEAVKYLTEALTPISEIELEDALEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S S I ++ P + G
Sbjct: 66 VV----------EAAVQECSQSVDE--TILLMTNHPAPN------------------LFG 95
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA L+R+R+++L QR R + F+ P E GS ++ T+++L+G T G
Sbjct: 96 TARDKAELFRERYIILHQRTHRHELFTPPVIGSHPDETGSKFQLKTVETLLGSTTKIGDV 155
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V++D+SKA+ +G +TE+ V+AEG D +F V
Sbjct: 156 IVLGMITQLKEGKFFLEDPTGTVQLDISKAQFHSGLYTESCFVLAEG-WFEDQVFHVNAF 214
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + T +L LE+ + MFV +SD+WLD EV
Sbjct: 215 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVWLDQGEV 274
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+GKL + G+ P+ F+ GNF S P + +L+ L +I +P +
Sbjct: 275 LGKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPNIH 330
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+F+PGP+D G ++LPR L + +T+E ++ +P +IF++NPCR+ +
Sbjct: 331 QSSRFVFVPGPEDPGFGSILPRPPLAESITDEFRQRVPFSIFTTNPCRIQY 381
>gi|403168904|ref|XP_003328477.2| hypothetical protein PGTG_09771 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167711|gb|EFP84058.2| hypothetical protein PGTG_09771 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 573
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 148/456 (32%), Positives = 237/456 (51%), Gaps = 59/456 (12%)
Query: 2 SGQTRKKIQK------KMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESS 55
+ QTR I + + +RG GLR + ++LS P ++ +++L ++ E S
Sbjct: 4 TDQTRAIIHRIFSKEHSLILRGDGLRW--IQDMLSHYRVAPADLEDTLNVLANECESYVS 61
Query: 56 LK--SSIIDKESVNRV-----TSVLLQAEAAAEGDSGSASNH----SAIRVIDAFLVPKF 104
+ S++ID+ + +V + Q + A E S S+H ++VIDAF +P+
Sbjct: 62 ARDISTVIDQNLLQKVYEKISSMTAAQPQEAVEDADQSESSHILELQTLKVIDAFSIPRL 121
Query: 105 RYDSIKKHFYQHA--GSLP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSE 161
R+ +K F + GS P + G+ +K + RDR+ + Q + R++HFS P+ V
Sbjct: 122 RWSEERKMFEEPTAEGSKPSLLGQPISKISYLRDRYHTIRQVIFRNEHFSPPA---VAGA 178
Query: 162 FGSCE------ISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITT 214
G E +++ +L+G+ G+R+++ G IS+++D + LEDL V++DLS A
Sbjct: 179 LGEAEREEYMKLTSSNNLLGRAGQRFLLFGRISRMKDQSYCLEDLEGWVKLDLSIASAAE 238
Query: 215 GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRL 274
G FTE +V+AEGE + F+V+ G PP E R + KL A DF G G L + RL
Sbjct: 239 GLFTEGCLVLAEGEYQSNETFKVLEIGHPPSEQRGATRKLFANIDFSGAGPLSLAEEARL 298
Query: 275 ADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-----ESVEVV--PSLFVFMGNFC 327
E+ ++ F+++SD LDN V+G E +L G+ ES VV P+L++ GNF
Sbjct: 299 KKREQN-SDSQFIVMSDFHLDNPNVLGNFEQILQGYQDVLIESNNVVRPPALWILCGNFS 357
Query: 328 SHP-----CNLSFHS--FSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLP 380
P N+SF+ FS L + F K + EH +F+PGP+D ST+LP
Sbjct: 358 QKPFIFDGPNISFYQSLFSKLAVSFSKFS-------LVTEHIHLIFVPGPNDPWDSTMLP 410
Query: 381 RCALPKYLTEEL---QKYIPNA--IFSSNPCRLNFL 411
R ALP + + L IP+ F SNPCR+ ++
Sbjct: 411 RQALPASIVKPLLHSTSQIPSGHLHFGSNPCRIRWM 446
>gi|348572139|ref|XP_003471851.1| PREDICTED: DNA polymerase epsilon subunit 2-like isoform 2 [Cavia
porcellus]
Length = 501
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 132/418 (31%), Positives = 213/418 (50%), Gaps = 52/418 (12%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ R + K+RG LR +A L E L VN + ED ++ ++D E + L S++
Sbjct: 5 RVRSRALSAFKLRGLLLRGEAIKYLTEALQSVNEL-ELED-TLEKIIDAVEKQP-LSSNM 61
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
I++ +V + + + +AE +NH +
Sbjct: 62 IERSAVE---TAVQECSRSAEETILLMTNHPEPNLF------------------------ 94
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEISTIQSLVGQ 176
G A KA LYR+R+ +L QR R + F+ P D + S+F ++ TI+SL+G
Sbjct: 95 ---GTARDKAELYRERYTILHQRTHRHELFTPPVVGSHPDAMGSKF---QLKTIESLLGS 148
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D
Sbjct: 149 TTKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQ 207
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGG-TLKKEDTLRLADLEKRAANDMFVILSDI 292
+F V GFPP E + +FFGG + + +L LE + MFV +SD+
Sbjct: 208 VFHVNAFGFPPTEPSSTTRAYYGNINFFGGPFNTSVKTSAKLKQLEDENKDAMFVFISDV 267
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL + G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 268 WLDQVEVLEKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADII 323
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
HP + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 324 CEHPNIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPYSVFTTNPCRIQY 381
>gi|297695039|ref|XP_002824764.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit 2
[Pongo abelii]
Length = 534
Score = 202 bits (513), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 141/428 (32%), Positives = 226/428 (52%), Gaps = 32/428 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSVSELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----YQHAG 118
V EAA + S S +I AF +P+F Y+S +K F +
Sbjct: 66 VV----------EAAVQECSQSVDETIEHVFNIIGAFDIPRFVYNSERKKFLPLLMTNHP 115
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT 177
+ + G A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 116 APNLFGTARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGST 175
Query: 178 ---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +
Sbjct: 176 TKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQV 234
Query: 235 FQVITCGFPPLEDRDQSLKLLAGY-DFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDI 292
F V GFPP E + Y +FFGG + T +L LE+ + MFV LSD+
Sbjct: 235 FHVNAFGFPPTEPSSTTRAYYGKYFNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDV 294
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD EV+ KL ++ G+ S F+ GNF S P + +L+ L +I
Sbjct: 295 WLDQVEVLEKLRIMFAGYSPAPPT-SCFILCGNFSSAP--YGKNQVQALKDSLKTLADII 351
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPS-TVLPRCALP--KYLTEELQ-KYIPNAIFSSNPCRL 408
+P + + SRF+F+PGP+D G +LPR A P K T+ +Q K +P ++F++NPCR+
Sbjct: 352 CEYPDIHQSSRFVFVPGPEDPGIWFPILPRAAPPCXKASTKXIQTKGVPFSVFTTNPCRI 411
Query: 409 NFLITVQL 416
L T +L
Sbjct: 412 QVLYTGKL 419
>gi|281343418|gb|EFB19002.1| hypothetical protein PANDA_010969 [Ailuropoda melanoleuca]
Length = 480
Score = 201 bits (511), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 131/393 (33%), Positives = 206/393 (52%), Gaps = 28/393 (7%)
Query: 41 EAIDLLLDQFEHESSLK-----SSIIDKESVNRVTSVLLQ---AEAAAEGDSGSASN--H 90
EAI L + E S ++ IID + S +++ EAA + S S
Sbjct: 1 EAIKYLTEALESISEVELEDTLEKIIDAVEKQPLPSNMIERCVVEAAVQECSQSVDETIE 60
Query: 91 SAIRVIDAFLVPKFRYDSIKKHF----YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSR 146
+I AF +P+F Y S +K F + + + G A KA L+R+R+ +L QR R
Sbjct: 61 HIFNIIGAFDIPRFVYSSERKKFLPLLMTNHPAPNLFGTARDKAELFRERYTILHQRTHR 120
Query: 147 DQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAAS 202
+ F+ P E GS ++ TI++L+G T G V+G+I+QL++G F+LED +
Sbjct: 121 HELFTPPVVGSHPDETGSKFQLKTIETLLGSTTKIGDVIVLGMITQLKEGKFFLEDPTGT 180
Query: 203 VEIDLSKAK----ITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGY 258
V++DLSKA G +TE+ V+AEG D +F V GFPP E +
Sbjct: 181 VQLDLSKAISLFIYLFGLYTESCFVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNV 239
Query: 259 DFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVP 317
+FFGG + T +L LE+ + MFV +SD+WLD EV+GKL + G+ P
Sbjct: 240 NFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVWLDQGEVLGKLHTMFSGYSPAP--P 297
Query: 318 SLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST 377
+ F+ GNF S P + +L+ L +I +P + + SRF+F+PGP+D G +
Sbjct: 298 TCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPSIHQSSRFVFVPGPEDPGFGS 355
Query: 378 VLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 356 ILPRPPLGESITSEFRQRVPFSVFTTNPCRIQY 388
>gi|427785195|gb|JAA58049.1| Putative dna polymerase epsilon subunit b [Rhipicephalus
pulchellus]
Length = 531
Score = 201 bits (510), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 148/424 (34%), Positives = 214/424 (50%), Gaps = 35/424 (8%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRF-PDAEDEAIDLLLDQFEHESSLKSS 59
MS + R KI K +IRG+ LR +A +L + D +D + LLD SL++
Sbjct: 1 MSVKVRSKILKSFQIRGFTLRSEASKFLLEALTPLDEDRQDLWLKRLLD------SLQAQ 54
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ---- 115
ID + + + E + G+ + V DAF + Y ++ F
Sbjct: 55 RIDGPFLTKDDLLGCIREFERSDNDGTDVR---LLVADAFTLAPLTYCQERRKFVPRELA 111
Query: 116 -HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174
H+G + G+A AKA +R+R+ L+ Q+ +R FS S S F ++ I+ L+
Sbjct: 112 GHSGPPRLFGDAGAKAFFFRERYQLVLQKTARHHCFSSRSRLPTASGF---DLRPIEHLL 168
Query: 175 GQTGRRWV-MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
G TG R V +G++ QLE+G+++LED SV+ID S K T F EN+ V+AEG D
Sbjct: 169 GTTGERVVVLGMLCQLEEGNYFLEDTTGSVKIDTSGTKFTADLFVENSFVLAEG-CYEDM 227
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIW 293
+F V G PP+E ++LK + G F K L L+D+ N +FV+LSD+W
Sbjct: 228 VFHVDAMGLPPIESASETLKYMGGASIFDKFPEKLRTQLELSDVPD---NALFVLLSDVW 284
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD +V+ L V+ GF + P+ FV GNF S L LR F L +M+
Sbjct: 285 LDQPKVLSHLRVLFTGF--AQGAPACFVLAGNFLSRSTGLQ-KDRVLLREGFKALAEMLN 341
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKY----IPNAI-----FSSN 404
P L +HSRF+FIPG D G S VLPR LP +TE L+ NA+ ++SN
Sbjct: 342 EFPLLVKHSRFIFIPGSRDPGLSNVLPRPGLPHQVTEPLRSRGSSEAENALAERCHWASN 401
Query: 405 PCRL 408
PCRL
Sbjct: 402 PCRL 405
>gi|222640703|gb|EEE68835.1| hypothetical protein OsJ_27613 [Oryza sativa Japonica Group]
Length = 236
Score = 201 bits (510), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 94/155 (60%), Positives = 120/155 (77%), Gaps = 11/155 (7%)
Query: 160 SEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA--------- 210
+E +CEI++IQSL+G TGRRW+MGVISQLE+ FYLEDL +V IDLS A
Sbjct: 2 TEDDNCEITSIQSLIGCTGRRWIMGVISQLEERQFYLEDLTGAVPIDLSNANSITSFLST 61
Query: 211 --KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK 268
KIT+GFF ENT+++AEGE+L +GIFQV TCGFPPLEDR+ SL +L G DFFGGG +
Sbjct: 62 EHKITSGFFVENTVILAEGELLSNGIFQVNTCGFPPLEDREASLSMLMGLDFFGGGVIAA 121
Query: 269 EDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
E+T+RL+ LEK+A NDMFVILSD+WLD+ E++ +
Sbjct: 122 EETVRLSTLEKKAMNDMFVILSDVWLDSSELVATI 156
>gi|321461047|gb|EFX72083.1| hypothetical protein DAPPUDRAFT_308600 [Daphnia pulex]
Length = 523
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 212/420 (50%), Gaps = 25/420 (5%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRF-PDAEDEAIDLLLDQFEHESSLKSS 59
M+ + + I K+ G +R +A I+ + D + + ++ L+D + + L S+
Sbjct: 1 MNSRFKNDIVMTFKLNGLTVRSEATKYIIGLLTPLHKDEQVQWLEKLIDVIQKQGLLNST 60
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF--YQHA 117
++K V R Q E D + + VI AF VPKF Y++ +K + +
Sbjct: 61 TVEKSHVERAAKECCQNEF----DETTV----LLNVISAFDVPKFVYNTERKKYLSFDAP 112
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGSCEISTIQSLVG 175
S+ + G+ K+ ++R R+ +L QR SR F+ PS + ++ I+ L+G
Sbjct: 113 HSINLFGDPRDKSEMFRHRYAILHQRTSRHSLFT-PSVLGSGSTASQNKYQLQPIEYLLG 171
Query: 176 QTGRRW---VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
+ + V+G+++ L +G +LED+ SV I L G FTEN V+ +G D
Sbjct: 172 MSTKLTNLVVLGMLTYLTEGKLHLEDMTGSVPISLKDTNFHGGLFTENCFVLGQG-YFQD 230
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK-EDTLRLADLEKRAANDMFVILSD 291
G+F + G PP E + +FFGG + + +++L +E++ + M V LSD
Sbjct: 231 GVFHIEHLGMPPPEPAKITRTYFGNTNFFGGSSTSTLKVSVKLKAIEEQNPDAMMVFLSD 290
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCS-HPCNLSFHSFSSLRLQFGKLGQ 350
+WLD VM KL ++ G+ E P FV MGNF S CN S S LR F L +
Sbjct: 291 VWLDQTRVMEKLRILFAGY--CEDPPICFVLMGNFLSGTTCNTSS---SHLRQLFKSLAE 345
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
MI P L E +RF+F+PGP D+G +LPR L + + E + IP+ IF++NPCR+ +
Sbjct: 346 MIKEFPNLVEQTRFIFVPGPSDSGFCNILPRPPLAEVIRAEFVQRIPSGIFTTNPCRIQY 405
>gi|351710609|gb|EHB13528.1| DNA polymerase epsilon subunit 2, partial [Heterocephalus glaber]
Length = 443
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 116/331 (35%), Positives = 184/331 (55%), Gaps = 20/331 (6%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY-----QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQ 148
+I AF VP+F Y+S +K F H + G A KA LYR+R+ +L QR R +
Sbjct: 5 NIIGAFDVPRFVYNSERKKFLPLLMTDHPAPN-LFGTARDKAELYRERYTILHQRTHRHE 63
Query: 149 HFSRPSFDVVNSEFG-SCEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVE 204
F+ P +E G ++ T+++L+G T G V+G+I+QL++G F+LED +V+
Sbjct: 64 LFTPPVIGSHPNEIGGKFQLKTVETLLGSTTKIGDVIVLGMITQLKEGKFFLEDPTGTVQ 123
Query: 205 IDLSKAKITT----GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
+DL+KA T G +TE V+AEG D +F V GFPP E + +F
Sbjct: 124 LDLNKAISFTFFHSGLYTEACFVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNINF 182
Query: 261 FGGGT-LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSL 319
FGG + + + + +L LE + MFV +SD+WLD EV+ KL + G+ V P+
Sbjct: 183 FGGPSNISVKTSAKLKQLEDENKDAMFVFISDVWLDQVEVLEKLHTMFSGYSPVP--PTC 240
Query: 320 FVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVL 379
F+ GNF S P + +L+ L +I +P + + SRF+F+PGP+D G ++L
Sbjct: 241 FILCGNFSSAP--YGKNQIQALKDSLKTLADIICEYPNIHQSSRFVFVPGPEDPGFGSIL 298
Query: 380 PRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
PR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 299 PRPPLAESITNEFRQRVPFSVFTTNPCRIQY 329
>gi|391348105|ref|XP_003748292.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Metaseiulus
occidentalis]
Length = 535
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 226/420 (53%), Gaps = 26/420 (6%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLK 57
M+ + + KI +++G LR +A L+++L + P + E I +++ F+++S L+
Sbjct: 8 MASRLKSKILNTFQVQGLTLRKEASQYLEQMLGQLETEP--QREWIQQMIEWFQNQS-LE 64
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
S++I K+ + + E ++ D H +VI AF VP F Y++ +K F +
Sbjct: 65 SALITKDLIVKCIK-----ECSSLPDE---QQHQVFKVISAFEVPAFTYNNDRKKFLKVE 116
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVV--NSEFGSCEISTIQSLVG 175
+ +A AKA LY++R+ ++ QR R + F+ PS + +++ ++ T +SL+G
Sbjct: 117 TKRILFPDADAKADLYQERYKVVHQRTLRHRLFAPPSAASLLSSTQAEHYKLCTCESLMG 176
Query: 176 --QTGRRWV--MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
+T ++V +G+I+QL++G LED V ++LSKA TE +IV+AEG
Sbjct: 177 MAKTDNKFVVVLGMITQLKEGKLSLEDPTGCVSLNLSKANFPEALITEGSIVLAEG-TYD 235
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILS 290
D IF V GF P E S + ++FGG +LK T + ++E++ + M V LS
Sbjct: 236 DKIFNVQAIGFAPAEAASISREFFGSVNYFGGDSLKCMKTDAAVREMEQQLDDSMIVFLS 295
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
D+WLD+ M +L+++ +G+ + P FV MGNF +L F +L+ F +L
Sbjct: 296 DVWLDDVRTMERLKILFEGYN--QCPPLAFVMMGNFLRD--SLGFADIVTLKDCFKQLAD 351
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+I P + E SRF+F+PG D S +LPR LP +TE +P +F+SNP R+
Sbjct: 352 LILQFPAVVERSRFIFVPGSRDPLVSKILPRPPLPTAITEAFSSKLPKTVFTSNPARIQL 411
>gi|350579064|ref|XP_003121854.3| PREDICTED: DNA polymerase epsilon subunit 2-like isoform 1 [Sus
scrofa]
Length = 501
Score = 197 bits (501), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 210/411 (51%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++A++ ++D E + L S++I+K
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTGALQSINEVELEDALEKIIDAVEKQP-LSSNMIEKS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S S + ++ + P + G
Sbjct: 66 VV----------EAAVQECSQSVDE--TMLLMTSHPAPN------------------LFG 95
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA L+R+R+ +L QR R + F+ P E GS ++ T+++L+G T G
Sbjct: 96 TARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTVETLLGSTSKIGDV 155
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V +DLSKA+ +G +TE+ V+AEG D IF V
Sbjct: 156 IVLGMITQLKEGKFFLEDPTGTVPLDLSKAQFHSGLYTESCFVLAEG-WFEDQIFHVNAF 214
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + T +L LE + MFV +SD+WLD EV
Sbjct: 215 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDVWLDQVEV 274
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+ KL + G+ P+ F+ GNF S P + +L+ L +I +P +
Sbjct: 275 LEKLHTMFSGYSPAP--PTCFILCGNFSSTP--YGKNQVQALKDSLKTLADIICEYPNIH 330
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 331 QSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPYSVFTTNPCRIQY 381
>gi|426233092|ref|XP_004010551.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Ovis aries]
Length = 501
Score = 197 bits (500), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 131/413 (31%), Positives = 212/413 (51%), Gaps = 46/413 (11%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L +N + ED A++ ++D E + L S++I+
Sbjct: 7 RSRALSAFKLRGLMLRGEAVKYLTEALQSINEI-ELED-ALEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPI 122
+ V EAA + S S I ++ P +
Sbjct: 64 RSVV----------EAAVQECSQSVDE--TILLMTNHPAPN------------------L 93
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---G 178
G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T G
Sbjct: 94 FGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTSKIG 153
Query: 179 RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
V+G+I+QL++G F+LED ++++DLSKA+ +G +TE+ V+AEG D +F V
Sbjct: 154 DVIVLGMITQLKEGKFFLEDPTGTIQLDLSKAQFHSGLYTESCFVLAEG-WFEDQVFHVN 212
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNE 297
GFPP E + +FFGG + T +L LE + MFV +SD+WLD
Sbjct: 213 AFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAMFVFISDVWLDQV 272
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P
Sbjct: 273 EVLEKLHIMFSGYSPAP--PTCFILCGNFSSVP--YGKNQVQALKDSLKTLADIICEYPN 328
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + SRF+F+PGP+D G ++LPR + +T E ++ +P ++F++NPCR+ +
Sbjct: 329 IHQSSRFVFVPGPEDPGFGSILPRPPFAESITNEFRQRVPFSVFTTNPCRIQY 381
>gi|449677395|ref|XP_002157494.2| PREDICTED: DNA polymerase epsilon subunit 2-like [Hydra
magnipapillata]
Length = 504
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 193/363 (53%), Gaps = 27/363 (7%)
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
L SI+D ++R + A AE G+ D VP + Y+ +K F
Sbjct: 42 LGGSIVDNVFIDRA----VLEHAVAECKEGN----------DDTGVPHYTYNVERKKFML 87
Query: 116 HAGSLP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----DVVNSEFGSCEISTI 170
+ P ++G A KA ++ +R+ LL+QR + F+ +F +V +++F + +
Sbjct: 88 DSNRKPCLNGLADDKANMFVERYTLLYQRTMHHELFTPSAFAASSNVKSAKFTLKPVEHL 147
Query: 171 QSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML 230
G G V G++++L++ ++LED + VE+DLSK TG +TEN V+AEG
Sbjct: 148 LGCSGNLGDIIVFGMLTRLKEDKYFLEDPSGVVELDLSKTVFHTGLYTENCFVLAEGSY- 206
Query: 231 VDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGT---LKKEDTLRLADLEKRAANDMFV 287
D +F V GFPPLE + +FFGG + + + L+ + + N+MFV
Sbjct: 207 DDQVFHVSALGFPPLEKAATTRSFFGNINFFGGPSSVCVASSEKLKQLEQDDVNQNNMFV 266
Query: 288 ILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGK 347
+SD+WLDN +V+ + +L G+ S+ P+LFV GNF S C L+ F +
Sbjct: 267 FISDLWLDNPKVISNFKTLLSGYASMP--PALFVICGNFLSQYCGTK--QLMQLKQGFDE 322
Query: 348 LGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCR 407
L Q+I+ + E SRF+F+PGP D GP+ +LPR L K ++E+L++ +P A F SNPCR
Sbjct: 323 LAQLISEFDEILESSRFVFVPGPQDLGPANILPRPPLSKMISEKLKEKVPFAYFLSNPCR 382
Query: 408 LNF 410
+ +
Sbjct: 383 IQY 385
>gi|397523552|ref|XP_003831793.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Pan
paniscus]
gi|426376834|ref|XP_004055187.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Gorilla
gorilla gorilla]
Length = 501
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 127/411 (30%), Positives = 211/411 (51%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S S I ++ P + G
Sbjct: 66 VV----------EAAVQECSQSVDE--TILLMTNHPAPN------------------LFG 95
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T G
Sbjct: 96 TARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGDV 155
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +F V
Sbjct: 156 IVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQVFHVNAF 214
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + T +L LE+ + MFV LSD+WLD EV
Sbjct: 215 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 274
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P +
Sbjct: 275 LEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPDIH 330
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 331 QSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 381
>gi|73962856|ref|XP_863300.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Canis lupus
familiaris]
Length = 501
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 215/411 (52%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R ++ K+RG LR +A+ + + + E ++A++ ++D E + L S++I++
Sbjct: 7 RSRMVSAFKLRGLLLRGEAIKYLTEALESISEVELEDALEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S +++D ++ + + + G
Sbjct: 66 VV----------EAAVQECS---------QLVDETIL-----------LMTNHPAPNLFG 95
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA L+ +R+ +L QR R + F+ P E GS ++ TI++L+G T G
Sbjct: 96 TARDKAELFLERYTILHQRTHRHELFTPPVIGSHPDETGSKFQLKTIETLLGSTAKIGDV 155
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +F V
Sbjct: 156 IVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDRVFHVNAF 214
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + T +L LE+ + MFV +SD+WLD EV
Sbjct: 215 GFPPTEPSSTTRAYYGNVNFFGGPSNTSVKTSAKLKQLEEENKDAMFVFISDVWLDQGEV 274
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+ KL + G+ P+ F+ GNF S P S +L+ L +I +P +
Sbjct: 275 LRKLHTMFSGYSPAP--PTCFIMCGNFSSAPYGKS--QIQALKDSLKTLADIICEYPNIH 330
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+FIPGP+D G ++LPR + + +T E ++ +P ++F++NPCR+ +
Sbjct: 331 QSSRFVFIPGPEDPGFGSILPRPPIAESITNEFRQRVPFSVFTTNPCRIQY 381
>gi|325181186|emb|CCA15600.1| DNA polymerase epsilon subunit putative [Albugo laibachii Nc14]
gi|325181885|emb|CCA16340.1| DNA polymerase epsilon subunit putative [Albugo laibachii Nc14]
Length = 538
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/410 (31%), Positives = 213/410 (51%), Gaps = 19/410 (4%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
R++I + K++G LR DAL + + P E + L ++ + S ++ ++
Sbjct: 3 RRQILRTCKLQGLTLRSDALARLHLELESNPTLRLEDVIYALKNSIDQTKISSGVVTLDA 62
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ--HAGSLPIH 123
V LL A E I++ +AF P+ + H Y+ S +H
Sbjct: 63 VESALDTLLVVSAENE--------FKPIQLFNAFDSPQLCLNE-PTHTYELRDGSSQRLH 113
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM 183
G A + + R+RFL + RV R+ FS+P V+ + E+S I SL+G G + V+
Sbjct: 114 GTAQDRLQVLRNRFLSVEWRVKRNPIFSKPP-SVLGTTTEYIELSNIDSLLGINGIKRVI 172
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
G++ Q + YLEDL + + +DL++A T G FT N V+ EGE++ D I V + GFP
Sbjct: 173 GMLGQDDRKRTYLEDLTSRIYLDLTEATYTEGLFTTNCTVLVEGEVIND-ILHVHSMGFP 231
Query: 244 PLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
P E + +S+ +L G D G + + ++ LEK + F++LSD+ D+ VM L
Sbjct: 232 PPETKAESMNVLNGIDPLGV-KISDQQLEQMQQLEKTGHHATFIVLSDVHFDDPSVMKHL 290
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSHP---CNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
+++ FE +++P+LFV MGNF S C LS + + F L +I +P+L E
Sbjct: 291 DMLFQAFE--DLLPTLFVLMGNFTSSKALGCGLSRGRLQNFKECFDDLADLILKYPKLAE 348
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
S+F+ +PGPDD S LPR L + + +L K +PN + ++NPCR+ +
Sbjct: 349 FSQFILVPGPDDPCASHSLPRHPLMQSVVRDLCKRVPNVVCATNPCRVRY 398
>gi|241816109|ref|XP_002414662.1| DNA polymerase epsilon subunit B, putative [Ixodes scapularis]
gi|215508873|gb|EEC18327.1| DNA polymerase epsilon subunit B, putative [Ixodes scapularis]
Length = 482
Score = 196 bits (498), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 122/360 (33%), Positives = 194/360 (53%), Gaps = 17/360 (4%)
Query: 52 HESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
E L+S++++++++ + E + G+ S S + V+DAF + D K
Sbjct: 11 QEQRLESALVNQQTLAKCIQ-----EWSHRGEEDSHSRE--VTVVDAFQLSPLSVDRKKF 63
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSE--FGSCEIST 169
A S + G++ +KA L+++R+ L+ Q+ +R F+ + V +SE S E+
Sbjct: 64 LPRDGARSPKLFGDSDSKAFLFQERYCLVLQKTARHPCFATKTCRVSSSEETGSSFELRN 123
Query: 170 IQSLVGQTGRRWV-MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGE 228
++ L+G R V +G+++Q E G ++LED SV +D+SKA T G FTE++ V+AEG
Sbjct: 124 VEQLLGTISERVVVLGMLTQFEQGKYFLEDPTGSVAVDVSKATFTEGLFTESSFVLAEG- 182
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVI 288
+ D +F++ G PP+E ++LK L F K L + DL A M V
Sbjct: 183 LYEDSVFRIEAIGLPPVEPASETLKYLGSTTIFSKLPEKVRTRLEIEDLPPDA---MMVF 239
Query: 289 LSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKL 348
LSD+WLD+ +V+ KL V+ G+ + P+ FV GNF S P + + L F KL
Sbjct: 240 LSDVWLDSAKVLDKLRVLFAGYS--QAPPTCFVLAGNFLSRPMG-TRKDAALLAECFKKL 296
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRL 408
++ P+L EHS+F+ +PGP D G S +LPR LP+ L EE K + +SNPCRL
Sbjct: 297 ADLVLEFPQLLEHSQFVLLPGPMDPGLSNILPRPGLPRTLVEEFTKKVSRCHLASNPCRL 356
>gi|114652889|ref|XP_001152861.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Pan
troglodytes]
Length = 501
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 212/411 (51%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S S I ++ P + G
Sbjct: 66 VV----------EAAVQECSQSVDE--TILLMTNHPAPN------------------LFG 95
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T G
Sbjct: 96 TARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGITTKIGDV 155
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +F V
Sbjct: 156 IVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQVFHVNAF 214
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + + + +L LE+ + MFV LSD+WLD EV
Sbjct: 215 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 274
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P +
Sbjct: 275 LEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPDIH 330
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 331 QSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 381
>gi|335775299|gb|AEH58525.1| DNA polymerase epsilon subunit 2-like protein [Equus caballus]
Length = 412
Score = 195 bits (495), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/294 (36%), Positives = 168/294 (57%), Gaps = 10/294 (3%)
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT--- 177
+ G A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 4 LFGTARDKAELFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKI 63
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE+ V+AEG D +F V
Sbjct: 64 GDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTESCFVLAEG-WFEDQVFHV 122
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDN 296
GFPP E + +FFGG + T +L LE + MFV LSD+WLD
Sbjct: 123 SAFGFPPTEPSSITRAYYGNINFFGGPSNTSVKTSAKLKQLEDENKDAMFVFLSDVWLDQ 182
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
EV+ KL + G+ P+ F+ GNF S P + +L+ L +I +P
Sbjct: 183 VEVLEKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYP 238
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 239 NIHQSSRFVFVPGPEDPGFGSILPRPPLAESVTSEFRQRVPFSVFTTNPCRIQY 292
>gi|28193232|emb|CAD62358.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 168/294 (57%), Gaps = 10/294 (3%)
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT--- 177
+ G KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 98 LFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKI 157
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +F V
Sbjct: 158 GDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQVFHV 216
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDN 296
GFPP E + +FFGG + T +L LE+ + MFV LSD+WLD
Sbjct: 217 NAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQ 276
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P
Sbjct: 277 VEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYP 332
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 333 DIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 386
>gi|309747079|ref|NP_001184259.1| DNA polymerase epsilon subunit 2 isoform 2 [Homo sapiens]
gi|194375524|dbj|BAG56707.1| unnamed protein product [Homo sapiens]
Length = 501
Score = 194 bits (494), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 168/294 (57%), Gaps = 10/294 (3%)
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT--- 177
+ G KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T
Sbjct: 93 LFGTPRDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKI 152
Query: 178 GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +F V
Sbjct: 153 GDAIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQVFHV 211
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDN 296
GFPP E + +FFGG + T +L LE+ + MFV LSD+WLD
Sbjct: 212 NAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQ 271
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
EV+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P
Sbjct: 272 VEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYP 327
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 328 DIHQSSRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 381
>gi|19113313|ref|NP_596521.1| DNA polymerase epsilon catalytic subunit B, Dpb2
[Schizosaccharomyces pombe 972h-]
gi|74582831|sp|O94263.1|DPB2_SCHPO RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|3810838|emb|CAA21799.1| DNA polymerase epsilon catalytic subunit B, Dpb2
[Schizosaccharomyces pombe]
Length = 594
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/330 (33%), Positives = 185/330 (56%), Gaps = 12/330 (3%)
Query: 89 NHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQ 148
N RV+DAF +PKF+YDS +K F S + ASA + RF +++ R+ R++
Sbjct: 135 NEKYFRVLDAFKMPKFKYDSSRKVFVLSKQSPTLMASASACTDMLNRRFNVVYSRILRNE 194
Query: 149 HFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDL 207
F PSF S+ G+ +++ I++L+G+ G +++ G+++ DG +LEDL + V++D+
Sbjct: 195 SFQTPSFSGSFSQTGTYQLTPIRNLLGRAGNTFLLFGLLTIAPDGTLWLEDLDSQVQLDV 254
Query: 208 SKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLK 267
S+A+ G F +V+ G+ L G+F V G PP+E RD SLK L D G
Sbjct: 255 SQAEQGFGLFCPGCLVLVNGQFLSSGLFLVFELGHPPIERRDASLKALNNLDILGLNMDA 314
Query: 268 KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
K+ L L E+ + FV +S++ LDN + LE + +ES E VP + G+F
Sbjct: 315 KQLAL-LRHAEQAYQSQAFVCISEVHLDNHQTFYALEKIFQKYESSEAVPFCIILCGSFM 373
Query: 328 SHPCNLSFH-SFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS---TVLPR 381
S +FH S SS++ + F KL + P++ E ++F+F+PGP+D + +++P+
Sbjct: 374 SS----AFHNSGSSIQYKEGFNKLAASLEKFPKICEKTKFIFVPGPNDPWTTNGISLMPK 429
Query: 382 CALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
++P + +Q+ + IF+SNPCR+ F
Sbjct: 430 HSIPLHFVNRIQRVCKHTIFASNPCRIIFF 459
>gi|332237022|ref|XP_003267699.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Nomascus
leucogenys]
Length = 501
Score = 193 bits (490), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 210/411 (51%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 7 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 65
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S S I ++ P + G
Sbjct: 66 VV----------EAAVQECSQSVDE--TILLMTNHPAPN------------------LFG 95
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA ++R+R+ +L QR R + F+ P E GS ++ TI++L+G T G
Sbjct: 96 TARDKAEMFRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLLGSTTKIGDV 155
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG D +F V
Sbjct: 156 IVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEDQVFHVNAF 214
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + T +L LE+ + MFV LSD+WLD EV
Sbjct: 215 GFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 274
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P +
Sbjct: 275 LEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPDIH 330
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+F+PGP+D ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 331 QSSRFVFVPGPEDPEFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 381
>gi|355778563|gb|EHH63599.1| hypothetical protein EGM_16600, partial [Macaca fascicularis]
Length = 473
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 122/381 (32%), Positives = 199/381 (52%), Gaps = 49/381 (12%)
Query: 40 DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVID 97
D+ ++ ++D E + L SS+I++ V EAA + S S +I
Sbjct: 19 DDKLEKIIDAVEKQP-LSSSMIERSVV----------EAAVQECSQSVDETIEHVFNIIG 67
Query: 98 AFLVPKFRYDSIKKHFYQHAGSLP---IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS 154
AF +P+F Y+S +K F + P + G A KA L+R+R+ +L QR R + F+ P
Sbjct: 68 AFDIPRFVYNSERKKFLLLMTNHPAPNLFGTARDKAELFRERYTILHQRTHRHELFTPPV 127
Query: 155 FDVVNSEFGS-CEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA 210
E GS ++ TI++L+G T G V+G+I+QL++G F+LED +V++DLSKA
Sbjct: 128 IGSHPDESGSKFQLKTIETLLGSTTKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKA 187
Query: 211 KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKE 269
+ +G +TE V+AEG I +FFGG +
Sbjct: 188 QFHSGLYTEACFVLAEGRAYYGNI------------------------NFFGGPSNTSVK 223
Query: 270 DTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH 329
+ +L LE+ + MFV LSD+WLD EV+ KL ++ G+ P+ F+ GNF S
Sbjct: 224 TSAKLKQLEEENKDAMFVFLSDVWLDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSA 281
Query: 330 PCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLT 389
P + +L+ L +I +P + + SRF+F+PGP+D G ++LPR L + +T
Sbjct: 282 P--YGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFGSILPRPPLAESIT 339
Query: 390 EELQKYIPNAIFSSNPCRLNF 410
E ++ +P ++F++NPCR+ +
Sbjct: 340 NEFRQRVPFSVFTTNPCRIQY 360
>gi|189239087|ref|XP_968222.2| PREDICTED: similar to DNA polymerase epsilon subunit B [Tribolium
castaneum]
Length = 519
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 128/418 (30%), Positives = 210/418 (50%), Gaps = 30/418 (7%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILS-FVNRFPDAE-----DEAIDLLLDQFEHESSLK 57
Q +KK+ +K G+ +R + +I++ F+ D E D + L E++ L
Sbjct: 5 QVKKKLHTALKFGGFNIRREFCGKIVAKFLREGIDLENKHHFDNCVKNLCSSLENQCLLG 64
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
SI +KE ++R V L+ SG N + VI+AF PK Y+ +K +Y
Sbjct: 65 HSI-EKEHIDRALEVCLK--------SGYDRNETIFSVINAFDFPKVSYNLDRKQYYLTE 115
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQT 177
+ A +KA L+ DR+ + R R+ F + + + N + E+ T+ L+ +
Sbjct: 116 NKPRLLSSADSKAQLFADRYATILHRTKRN--FIQKATENTNIKL---ELQTVDYLLTLS 170
Query: 178 G----RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
V+G + Q+ +G +YLED V++DLS A G F EN V+ G D
Sbjct: 171 NVSLNHTLVLGSLLQVSEGKYYLEDPTGIVQLDLSHAVYYGGLFAENCFVLVNGHY-EDK 229
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK-EDTLRLADLEKRAANDMFVILSDI 292
I +V T PP E+ S ++FGG + +D+++L D +R F+ S++
Sbjct: 230 IIKVSTLILPPGEEYANSRPFFNTINYFGGPSPTPLKDSVKLRDHLQRNRGASFMFFSNV 289
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
WLD+ + KLE++ +GF P+ FVFMGNF S C S + +LR F +L ++I
Sbjct: 290 WLDHPSIFEKLELLFEGFNPSP--PAAFVFMGNFMSESC--SSNKMDTLRKLFKQLAELI 345
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ L + F+F+PG +D S V+PR +P +TE++ K + A+F+SNPCRL +
Sbjct: 346 NKYENLATVTNFIFVPGLEDPCTSYVVPRLPIPSCITEDMTKMVKKAVFTSNPCRLQY 403
>gi|390469050|ref|XP_003734042.1| PREDICTED: DNA polymerase epsilon subunit 2 isoform 2 [Callithrix
jacchus]
Length = 504
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 126/411 (30%), Positives = 210/411 (51%), Gaps = 42/411 (10%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A+ + + + E ++ ++ ++D E + L S++I++
Sbjct: 10 RSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIIDAVEKQP-LSSNMIERS 68
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
V EAA + S S I ++ P + G
Sbjct: 69 VV----------EAAVQECSQSVDE--TILLMTNHPAPN------------------LFG 98
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQT---GRR 180
A KA L+R+R+ +L QR R + F+ P E GS ++ TI++L+G T G
Sbjct: 99 TARDKAELFRERYTILHQRTHRHELFTPPVIGSNPDESGSKFQLKTIETLLGSTTKIGDV 158
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG + +F V
Sbjct: 159 IVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WFEEQVFHVNAF 217
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-LRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E + +FFGG + T +L LE+ + MFV LSD+WLD EV
Sbjct: 218 GFPPTEPSSTTRAYYGSINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFLSDVWLDQVEV 277
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
+ KL ++ G+ P+ F+ GNF S P + +L+ L +I +P +
Sbjct: 278 LEKLRIMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPDIH 333
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ SRF+F+ GP+D G ++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 334 QSSRFVFVSGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 384
>gi|403180543|ref|XP_003338843.2| hypothetical protein PGTG_20380 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375167598|gb|EFP94424.2| hypothetical protein PGTG_20380 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 561
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 144/450 (32%), Positives = 232/450 (51%), Gaps = 57/450 (12%)
Query: 2 SGQTRKKIQK------KMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESS 55
+ QTR I + + +RG GLR + ++LS P ++ +++L ++ E S
Sbjct: 4 TDQTRAIIHRIFSKEHSLILRGDGLRW--IQDMLSHYRVAPADLEDTLNVLANECESYVS 61
Query: 56 LK--SSIIDKESVNRV-----TSVLLQAEAAAEGDSGSASNH----SAIRVIDAFLVPKF 104
+ S++ID+ + +V + Q + A E S S+H ++VIDAF +P+
Sbjct: 62 ARDISTVIDQNLLQKVYEKISSMTAAQPQEAVEDADQSESSHILELQTLKVIDAFSIPRL 121
Query: 105 RYDSIKKHFYQHAG--SLP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSE 161
R+ +K F + G S P + G+ +K + RDR+ + Q + R++HFS P+ V
Sbjct: 122 RWSEERKMFEEPTGEGSKPSLLGQPISKISYLRDRYHTIRQVIFRNEHFSPPA---VAGA 178
Query: 162 FGSCE------ISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITT 214
G E +++ +L+G+ G+R+++ G IS+++D + LEDL V++DLS A
Sbjct: 179 LGEAEREEYMKLTSSNNLLGRAGQRFLLFGRISRMKDQSYCLEDLEGWVKLDLSIASAAE 238
Query: 215 GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRL 274
G FTE +V+AEGE + F+V+ G PP E R + KL A DF G G L + RL
Sbjct: 239 GLFTEGCLVLAEGEYQSNETFKVLEIGHPPSEQRGATRKLFANIDFSGAGPLSLAEEARL 298
Query: 275 ADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-----ESVEVV--PSLFVFMGN-F 326
E+ ++ F+++SD LDN V+G E +L G+ ES VV P+L++ GN F
Sbjct: 299 KKREQN-SDSQFIVMSDFHLDNPNVLGNFEQILQGYQDVLIESNNVVRPPALWILCGNFF 357
Query: 327 CSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPK 386
SH + + S F K + EH +F+PGP+D ST+LPR ALP
Sbjct: 358 QSHHIDGTI----SASTNFSKFS-------LVTEHIHLIFVPGPNDPWDSTMLPRQALPA 406
Query: 387 YLTEEL---QKYIPNA--IFSSNPCRLNFL 411
+ + L IP+ F SNPCR+ ++
Sbjct: 407 SIVKPLLHSTSQIPSGHLHFGSNPCRIRWM 436
>gi|340714718|ref|XP_003395872.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon subunit
2-like [Bombus terrestris]
Length = 523
Score = 190 bits (482), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 110/326 (33%), Positives = 180/326 (55%), Gaps = 16/326 (4%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
+ + VID F +P+ +Y+ + F + + EA K+ L++DRF LL+ R R + F
Sbjct: 85 TILNVIDVFDIPRIKYELSENKFVLETVTPNLVAEAQYKSILFKDRFELLWYRTMRHELF 144
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVG--QTGRRWVMGVISQLEDGHFYLEDLAASVEIDLS 208
+ P ++ E+ I+ L+ + G +VMG++SQL +G +YLED ++++DL
Sbjct: 145 TPPMPGEKKXDW--IELIPIEHLLSGSKEGNVYVMGLLSQLVEGQYYLEDTGGTIKVDLQ 202
Query: 209 KAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK 268
KA+ G E +IV+A+G+ DGI V GFPP E + + FGG +
Sbjct: 203 KARFQDGLIMECSIVIADGD-FKDGILHVKNLGFPPAESSSNARVDFGNANTFGGLS--- 258
Query: 269 EDTLRLAD----LEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMG 324
E +L+L++ E+ M V +S++WLD++ V+ K +++L+G+ E P FV G
Sbjct: 259 EFSLKLSEKLKTYEESNKEGMIVFISEMWLDDKTVLRKFKIMLEGYS--EYPPIAFVLCG 316
Query: 325 NFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCAL 384
+F S P S S L L +I +P + + S+F+F+P DD G +LP+ L
Sbjct: 317 HFLSFPAKPS--SRQKLIEGLKNLADIIIQYPDINQTSKFIFVPATDDIGSPKILPKLPL 374
Query: 385 PKYLTEELQKYIPNAIFSSNPCRLNF 410
PK LTE+ +K IP AIF++NPCR+ +
Sbjct: 375 PKNLTEDFRKSIPGAIFATNPCRIQY 400
>gi|328778914|ref|XP_001120791.2| PREDICTED: DNA polymerase epsilon subunit 2-like [Apis mellifera]
Length = 499
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/325 (33%), Positives = 178/325 (54%), Gaps = 24/325 (7%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
+ + VID F VPK +YD KK F ++ EA K+ +++DRF LL+ R R + F
Sbjct: 85 TVLNVIDVFDVPKIKYDLSKKKFILENILPDLYAEAQYKSTIFKDRFELLWYRTLRHELF 144
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVGQT--GRRWVMGVISQLEDGHFYLEDLAASVEIDLS 208
P + E+++I+ L+ +T G +VMG++++L +G +YLED +++DL
Sbjct: 145 IPPKLGEKKENW--IELTSIEYLLSETKKGNVYVMGLLTELTEGQYYLEDTGGFIKLDLK 202
Query: 209 KAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG---T 265
K+ +IV+ G +G+ V G PP E + + + FGG +
Sbjct: 203 KS----------SIVIVNGN-FQEGVLHVENIGLPPAESSNNARVDFGNSNTFGGSHNLS 251
Query: 266 LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGN 325
LK + L++ E+ + M V +S+IWLD+ V+ K + +++G+ E P FV G+
Sbjct: 252 LKFSEKLKI--FEESNKDGMIVFVSEIWLDDVTVLRKFKTMIEGYS--ECPPIAFVLCGH 307
Query: 326 FCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALP 385
F S N+S S L+ L +I +P +K+ S+F+F+P PDD G +LPR LP
Sbjct: 308 FLSFSTNIS--SKHKLKKGLKNLADIIIQYPDIKQTSKFIFVPAPDDIGSPKILPRSPLP 365
Query: 386 KYLTEELQKYIPNAIFSSNPCRLNF 410
K+LTE+ +K IP AIF++NPCR+ +
Sbjct: 366 KHLTEDFRKNIPGAIFTTNPCRIQY 390
>gi|397621191|gb|EJK66164.1| hypothetical protein THAOC_12930 [Thalassiosira oceanica]
Length = 411
Score = 189 bits (479), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/284 (36%), Positives = 170/284 (59%), Gaps = 9/284 (3%)
Query: 132 LYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLED 191
++ R+ L+ QR+ R F +NSE ++ ++SL+G++GRR+++G+I Q+E+
Sbjct: 1 MFAQRYALIQQRILRQDIFQPKLVQGMNSEGAHHTLTPVESLLGRSGRRFLLGMIVQVEE 60
Query: 192 GHFYLEDLAASVEIDLSKAKI-TTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQ 250
+YLED + ++ S++ + T GF TEN+IV+ EGE +DG+ V G P +E+R
Sbjct: 61 RKYYLEDHTGQIPLNFSESSLLTDGFITENSIVLIEGEA-IDGVLYVHNLGSPIVENRQD 119
Query: 251 SLKL--LAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVL 307
++ L D F G+L + + LR ++ K MFV+LSD+ LD+ V+ K++ +L
Sbjct: 120 AINAIGLQNTDMFNSIGSLGELENLREQEI-KHGQEGMFVVLSDVHLDSPAVVEKIDRML 178
Query: 308 DGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFI 367
+G+ +P +FVFMGNF S P LS ++ F L +I HP + RF+F+
Sbjct: 179 EGYSDFSPLP-IFVFMGNFTSKP--LSGEGTRAMMSYFDDLTNVICKHPDIARDGRFVFV 235
Query: 368 PGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
PGP+DAG S +LPR +P Y+T L+ + +AIF+SNPCR+ +
Sbjct: 236 PGPNDAGISGILPRGPIPNYITSSLRSKVRHAIFASNPCRMRYF 279
>gi|297826605|ref|XP_002881185.1| hypothetical protein ARALYDRAFT_902197 [Arabidopsis lyrata subsp.
lyrata]
gi|297327024|gb|EFH57444.1| hypothetical protein ARALYDRAFT_902197 [Arabidopsis lyrata subsp.
lyrata]
Length = 322
Score = 188 bits (478), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 135/225 (60%), Gaps = 42/225 (18%)
Query: 183 MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGF 242
MG+ISQLEDGHFYLE L+A V+IDLSKA G T + E+ D VI CGF
Sbjct: 1 MGLISQLEDGHFYLEYLSACVKIDLSKAICLFG-----TSTIDNLELYRDSQKIVIACGF 55
Query: 243 PPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGK 302
P LEDRD++L + + FFG G K++ +RLADLE++A ND FV IWL+ EE +
Sbjct: 56 PHLEDRDKTLSIHSENYFFGSGRPTKDEMIRLADLERKAVNDTFV----IWLEGEESI-- 109
Query: 303 LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362
VLDGFESVE+VP+L VFMGNFCS P ++ +SL +P
Sbjct: 110 --TVLDGFESVEIVPTLCVFMGNFCSRPSRVAMRKHASL-------------YP------ 148
Query: 363 RFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCR 407
P TVLPRC LP+Y TEEL++ IPNAIFSSNPCR
Sbjct: 149 ----------TRPLTVLPRCGLPEYSTEELREVIPNAIFSSNPCR 183
>gi|428167521|gb|EKX36479.1| DNA polymerase epsilon subunit B, partial [Guillardia theta
CCMP2712]
Length = 472
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 128/365 (35%), Positives = 193/365 (52%), Gaps = 32/365 (8%)
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
S +++TS L+Q E E + + AI +ID P RYD +K F + GS
Sbjct: 5 SQSKITSELVQ-EIINETEQRDGESTEAIVIIDHKETPISRYDKDRKVFLREDGS---SR 60
Query: 125 EASAKAA------LYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTG 178
SAK +R+R+ ++ QRV R++ F + F V +S + EIS+I SL G
Sbjct: 61 SISAKKVQFNRLQAFRERYEIINQRVMRNEIFEKKKF-VQDSTYQ--EISSITSLRRNPG 117
Query: 179 RR-WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
+ V+G+++Q ++G F+LEDL +EIDLS A + G FTEN +VVA+G M D IF V
Sbjct: 118 QSSCVLGLLTQPKEGKFHLEDLTGEIEIDLSNADTSVGLFTENCVVVAQGMMKGD-IFVV 176
Query: 238 ITCGFPPLEDRDQSLKLLAGYDF-FGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
PP EDR ++ ++ E+ L E + A ++LSD+WLD
Sbjct: 177 QVLAMPPAEDRKETCRIFPTLSVPTNRKPYTNEELESLRAEESQQAGTRVIVLSDVWLDR 236
Query: 297 EEVMGKLEVVLDGFESVEVVPS-------LFVFMGNFCSHPC--NLSFHSFSSLRLQFGK 347
+VM L+++L ++S +FVFMGNF S P N + H R F +
Sbjct: 237 AKVMNGLKMMLFRYDSACKEAGEDSDLFLIFVFMGNFTSQPAPKNYTLH-----RELFDQ 291
Query: 348 LGQMIAAHPRLKEHSRFLFIPGPDDAGPST--VLPRCALPKYLTEELQKYIPNAIFSSNP 405
LG +I + L+ S F+FIPGP+D S +LPR +LP +TE + +P++ F+S+P
Sbjct: 292 LGTIIQSFKNLENKSSFIFIPGPNDVLGSNGMILPRNSLPTVITEPFKNKVPSSTFTSDP 351
Query: 406 CRLNF 410
CR+ F
Sbjct: 352 CRIKF 356
>gi|58269040|ref|XP_571676.1| epsilon DNA polymerase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112784|ref|XP_774935.1| hypothetical protein CNBF1000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818003|sp|P0CN25.1|DPB2_CRYNB RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|338818004|sp|P0CN24.1|DPB2_CRYNJ RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|50257583|gb|EAL20288.1| hypothetical protein CNBF1000 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227911|gb|AAW44369.1| epsilon DNA polymerase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 541
Score = 184 bits (468), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 177/333 (53%), Gaps = 9/333 (2%)
Query: 82 GDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLF 141
D + S V+D+F +P RYD ++ F Q + G+AS+++A R+R+ ++
Sbjct: 87 ADPSEVNVESHFSVVDSFDMPAMRYDPVRSGFVQSKAQPSVAGQASSRSAFLRERWAIIK 146
Query: 142 QRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLA 200
+ + R+++F+ P+ + ++++I++L+G+ G+ +++ G++++ E+G LED
Sbjct: 147 EIILRNENFTPPAIGG-HDRANYLKLTSIRNLLGRAGQLFLLFGMLARNEEGKLCLEDGE 205
Query: 201 ASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
+ V +D+ A G FTE +V+ EGE V+ +V+ G PP E R+ + L DF
Sbjct: 206 SRVVLDMEDAVPGEGLFTEGCMVLIEGEYTVEETVRVLAMGHPPSERRNIARSLHGHVDF 265
Query: 261 FGGG--TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-ESVEVVP 317
GGG +LK+E L + FVILSD+WLD+ M L + +G+ + E P
Sbjct: 266 LGGGAVSLKEEQKYNPTVLANTQIS--FVILSDVWLDHPRTMPALRQMFEGYANTAEYRP 323
Query: 318 SLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST 377
+FV GNFC F L +++ + P L S F+F+PGP D ST
Sbjct: 324 MVFVLCGNFCQGGWE-GQEGLKRYSRGFNSLAELLQSIPLLHS-SHFVFVPGPSDPWSST 381
Query: 378 VLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
LPR +LP T L IPNA F SNPCRL +
Sbjct: 382 TLPRPSLPSAFTTRLSNRIPNARFVSNPCRLKY 414
>gi|405121150|gb|AFR95919.1| epsilon DNA polymerase [Cryptococcus neoformans var. grubii H99]
Length = 541
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 109/334 (32%), Positives = 177/334 (52%), Gaps = 9/334 (2%)
Query: 82 GDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLF 141
D + S V+D+F +P RYD ++ F Q + G+AS++A+ R+R+ ++
Sbjct: 87 ADPSEVNVESHFSVVDSFDMPAMRYDPVRSGFVQSKAQPSVAGQASSRASFLRERWAIIK 146
Query: 142 QRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLA 200
+ + R+++F+ P+ + ++++I++L+G+ G+ +++ G++++ E+G LED
Sbjct: 147 EIILRNENFTPPAIGG-HDRANYLKLTSIRNLLGRAGQLFLLFGMLARNEEGKLCLEDGE 205
Query: 201 ASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
+ V +D+ A G FTE +V+ EG+ V+ +V+ G PP E RD + L DF
Sbjct: 206 SRVVLDMEDAVPGEGLFTEGCMVLIEGQYTVEETVRVLAMGHPPSERRDIARSLHGHVDF 265
Query: 261 FGGG--TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-ESVEVVP 317
GGG +LK+E L + FVILSD+WLD+ M L + +G+ + E P
Sbjct: 266 LGGGAVSLKEEQKFNPTVLANTQIS--FVILSDVWLDHPRTMPALRQMFEGYANTAEYRP 323
Query: 318 SLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST 377
+FV GNFC F L +++ + P L S F+F+PGP D ST
Sbjct: 324 MVFVLCGNFCQGGWE-GQDGLKRYSRGFNYLAELLQSIPLLHS-SHFVFVPGPSDPWSST 381
Query: 378 VLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
LPR +LP T L IPNA F SNPCRL +
Sbjct: 382 TLPRPSLPSAFTTRLSNRIPNAKFVSNPCRLKYF 415
>gi|395838696|ref|XP_003792246.1| PREDICTED: DNA polymerase epsilon subunit 2 [Otolemur garnettii]
Length = 493
Score = 184 bits (467), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 130/421 (30%), Positives = 211/421 (50%), Gaps = 66/421 (15%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ R + K+RG LR +A L E L +N + ED+ + ++ D E + L S++
Sbjct: 5 RVRSRALSAFKLRGLLLRGEAIKYLTEALQSINEL-ELEDKLVKII-DAVEKQP-LSSNM 61
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGS--ASNHSAIRVIDAFLVPKFRYDSIKKHF----Y 114
I++ +V EAA + S S + A +I AF +P+F Y+S +K F
Sbjct: 62 IERSAV----------EAAVQECSQSFDETIEHAFNIIGAFDIPRFVYNSERKKFLPLLM 111
Query: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSL 173
+ + + G A KA L+R+R+++L QR R + F+ P E GS ++ TI++L
Sbjct: 112 TNHPAPNVFGTARDKAELFRERYIILHQRTHRHELFTPPVIGAHPDETGSKFQLKTIETL 171
Query: 174 VGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML 230
+G T G V+G+I+QL++G F+LED +V++DLSKA+ +G +TE V+AEG
Sbjct: 172 LGSTSKIGDVIVLGMITQLKEGKFFLEDPTGTVQLDLSKAQFHSGLYTEACFVLAEG-WF 230
Query: 231 VDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVIL 289
D +F V GFPP E + +FFGG + + +L LE+ + MFV +
Sbjct: 231 EDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNTSVKTSAKLKQLEEENKDAMFVFI 290
Query: 290 SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG 349
SD+WLD EV+ KL + +E S F+ +
Sbjct: 291 SDVWLDRVEVLEKLRTMFSDSIVLETFISSFINI-------------------------- 324
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
SRF+F+PGP+D G +LPR L + +T E ++ +P ++F++NPCR+
Sbjct: 325 ------------SRFVFVPGPEDPGFGAILPRPPLAESITSEFRQRVPFSVFTTNPCRIQ 372
Query: 410 F 410
+
Sbjct: 373 Y 373
>gi|328858846|gb|EGG07957.1| hypothetical protein MELLADRAFT_105465 [Melampsora larici-populina
98AG31]
Length = 567
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 129/433 (29%), Positives = 224/433 (51%), Gaps = 38/433 (8%)
Query: 10 QKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLK--SSIIDKESVN 67
+ + +RG GLR ++++L+ P+ ++ ++ L + E E +L+ S+++D+ +
Sbjct: 18 EHSLILRGDGLRW--IEDMLAHYKVSPEDIEDTLNTLATECESEVTLRDASAVVDQHILQ 75
Query: 68 RVTSVLLQAEAAA-------EGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF--YQHAG 118
V LL A E DS + +H+ +VIDAF +P+ + +K F ++
Sbjct: 76 TVYDRLLAPTAEEPTLNADHEADSLISESHT-FKVIDAFQIPRLTWSEDRKIFELFEAGK 134
Query: 119 SLP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCE------ISTIQ 171
S P I G+ +++ RDR+ ++ Q + R++HFS P+ V G+ E +++ +
Sbjct: 135 SKPSILGQPMSRSLYLRDRYHVIKQVILRNEHFSPPT---VAGGAGAEEREEYMKLTSTR 191
Query: 172 SLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML 230
+++G+ G+R+++ G++S+++D + LEDL V++DLS A GFFTE V+AEGE
Sbjct: 192 NMLGRAGQRFLLFGMLSRMQDYSYCLEDLDGRVKLDLSNATPAEGFFTEGCFVLAEGEYQ 251
Query: 231 VDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILS 290
D F+V+ G PP E RD K A DF G G L + +L E A++ F+++S
Sbjct: 252 ADESFRVLEIGHPPSEQRDVCRKQFAHIDFTGTGALPLSEEAKLVKAES-ASDTQFIVMS 310
Query: 291 DIWLDNEEVMGKLEVVLDGFESV-------EVVPSLFVFMGNFCSHPCNLSFHSFSSLRL 343
D +LDN V+ E +LDG+E P ++V G+F P + +
Sbjct: 311 DFYLDNPSVLINFERILDGYEDQFQSSGGGIRPPPVWVLCGDFSQKPFIFDGNMTMAYTA 370
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEEL---QKYIP--N 398
F KL ++ + + + + +PGP D ST LPR +LP + + L IP N
Sbjct: 371 LFTKLANSLSKYSNITPYIHLVIVPGPHDPWSSTTLPRSSLPLPIVKPLLASASRIPKEN 430
Query: 399 AIFSSNPCRLNFL 411
SNPCR+ ++
Sbjct: 431 IHLVSNPCRIRWM 443
>gi|328769828|gb|EGF79871.1| hypothetical protein BATDEDRAFT_25340 [Batrachochytrium
dendrobatidis JAM81]
Length = 648
Score = 184 bits (466), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 115/359 (32%), Positives = 189/359 (52%), Gaps = 15/359 (4%)
Query: 61 IDKESVNRVTSVLLQAEAAA---EGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
++ + +NR +VL A E + I +IDA+ VP +Y + K F
Sbjct: 147 VEDQGMNRYENVLYDPSNEADEIEPTTNIQEISQCISIIDAYQVPHNQYWADKNTFISVT 206
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQT 177
A ++ AL+RDRF LL QR+ R++ F P+F +S + +I+ I L G+
Sbjct: 207 SKETPVASADSRTALFRDRFDLLKQRLLRNEAFRVPTFTADDSSY--FQITPIIHLKGKK 264
Query: 178 -GRRWVMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIF 235
GR + G+++ ++DG+++LED A ++++ K + G T N ++ +G+ G F
Sbjct: 265 PGRYLLFGMLTSIQDGNYHLEDTDAFIQLEFQKIMQQGPGMITRNCFMLIQGDYTDQGTF 324
Query: 236 QVITCGFPPLEDRDQSLKLLAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
+V G P E R+ S+ DFFGG E + L +E A + V +SD+WL
Sbjct: 325 KVDVIGHPLPERREDSISAFGNNVDFFGGARFSDEQHV-LEKIELDAVDISMVFISDVWL 383
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ---FGKLGQM 351
D V+ KL ++L GF S VVP +FVF GNF S P ++ S R + F L +
Sbjct: 384 DQTRVLDKLRILLKGF-SDAVVPLVFVFSGNFSSTP--YIYNGSESKRYKAEGFDNLADL 440
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I+ P + E + F+F+PGP D +LPR +PK LTE++++ + + F+++PCR+ +
Sbjct: 441 ISEFPLIAEQAHFVFVPGPHDPWAPNILPRAPIPKSLTEKIRQKVVHTYFTTSPCRIKY 499
>gi|321259866|ref|XP_003194653.1| epsilon DNA polymerase [Cryptococcus gattii WM276]
gi|317461125|gb|ADV22866.1| epsilon DNA polymerase, putative [Cryptococcus gattii WM276]
Length = 542
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 173/331 (52%), Gaps = 5/331 (1%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
D + S V+D+F +P RYD ++ F Q + G+AS+++ R+R+ ++ +
Sbjct: 88 DPSEVNVESHFSVVDSFSMPAIRYDPVRSGFVQSKVPPSVAGQASSRSTFLRERWAIIKE 147
Query: 143 RVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAA 201
+ R+++F+ P+ + ++++I++L+G+ G+ +++ G++++ E+G LED
Sbjct: 148 IILRNENFTPPAIGG-HDRANYLKLTSIRNLLGRAGQLFLLFGMLARNEEGKLCLEDGEG 206
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
V +D+ A G FTE +V+ EGE + +V+ G PP E RD + L DF
Sbjct: 207 RVVLDMEDAVPGEGLFTEGCMVLIEGEYTAEETVRVLAMGHPPSERRDIARSLHGHVDFL 266
Query: 262 GGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-ESVEVVPSLF 320
GGG + ++ + FVILSD+WLD+ M L +L+G+ + E P +F
Sbjct: 267 GGGAVSLKEEQKYNSTVLANTQISFVILSDVWLDHPRTMPALRQMLEGYANTAEYRPMVF 326
Query: 321 VFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLP 380
+ GNFC + F L +++ + P L S F+F+PGP D ST LP
Sbjct: 327 ILCGNFCQGGWD-GEEGLKRYTRGFNSLAELLQSIPLLHS-SHFVFVPGPSDPWSSTTLP 384
Query: 381 RCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
R +LP T L IPNA F SNPCRL +
Sbjct: 385 RPSLPSAFTTRLSNRIPNAKFVSNPCRLKYF 415
>gi|324506820|gb|ADY42900.1| DNA polymerase epsilon subunit 2 [Ascaris suum]
Length = 513
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 129/418 (30%), Positives = 203/418 (48%), Gaps = 37/418 (8%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSI 60
S + RK+++ ++R Y L+ D L+ ++ + F DA+ I+ ++D + SL S +
Sbjct: 5 SDRLRKQLKTAFQLRSYSLKRDTLEYAVNILTEFDDAQRSRWIERIIDAIS-KLSLNSPL 63
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
+D E+ Q+ A + +A + S VID F P+F YD G
Sbjct: 64 LDLET--------FQSAVANCANKNAAKSESLFNVIDIFSAPRFDYDDSLNKLVLIPGEA 115
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
G L R+R + QRV R +S F +ST+++L+G R
Sbjct: 116 SAIGNCDDAVNLLRNRLKFVTQRVLR------------SSAFEHYHLSTVETLLGSASRA 163
Query: 181 ---WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
V+G+++Q + +EDL S+ +DLS A +G FT+ I++ EG G+ V
Sbjct: 164 DNVIVLGLLTQCSADSYQVEDLTGSMPVDLSNATFHSGLFTDGCIMLLEGSYSA-GLLTV 222
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL-RLADLEKRAANDMFVILSDIWLDN 296
G P+E D + ++FGG + T+ RL + + V LSD+WLD+
Sbjct: 223 SGVGLAPIETADATRAFFGNENWFGGESAVAYRTVPRLRSANLKYTDARIVFLSDVWLDD 282
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA--- 353
+VM L + GF E P FVF GNFCS C + +++ L F L +I+
Sbjct: 283 PKVMKGLYNLFVGFS--ESPPIAFVFCGNFCS--CAGTPDAYNRLTDGFRHLANIISEQI 338
Query: 354 -AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ +L E S F+F+PG DD T+LPR LP L E+++K IPN F+SNPCR+ +
Sbjct: 339 DENSQLAE-SHFVFVPGSDDPTIGTILPRPPLPFALFEQMKK-IPNCSFASNPCRIQY 394
>gi|402226043|gb|EJU06103.1| DNA polymerase epsilon subunit B [Dacryopinax sp. DJM-731 SS1]
Length = 547
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/422 (29%), Positives = 205/422 (48%), Gaps = 21/422 (4%)
Query: 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLL--LDQFEHESSLKSSIID 62
T + QKK + L++DA IL + EDE D L L + S+++
Sbjct: 7 TSIEFQKKYML---ALQVDAAQFILDILAEHSVGEDEVSDSLEHLAKGWMAQEYDSNLVT 63
Query: 63 KESVNRVTSVLLQAEAA-----------AEGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
K + RV LLQ ++ A G+ + +DAF +P++ Y S+++
Sbjct: 64 KPQIQRVYE-LLQVDSREVGGAGGAGTYALGEENELDPSQHLVFVDAFDMPRWMY-SVER 121
Query: 112 HFYQHAGSLP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTI 170
H ++ + + P I G +++ A RDR+ ++ Q V R++HF+ P+ S+ + ++++
Sbjct: 122 HTFEKSSTPPNIAGSPASRTAFLRDRYHVIKQVVLRNEHFT-PAVVPGLSQGDTNKLTST 180
Query: 171 QSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM 229
++L+G G +++ G+++ DG LED+ V +D+S+A G TE V+ EGE
Sbjct: 181 KNLLGCAGETFMLLGMLAHEPDGKLCLEDVDGKVLLDMSQAASCQGLITEGCFVLVEGEY 240
Query: 230 LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVIL 289
+ +V G PP E R S + DF G G + A + + FV++
Sbjct: 241 TDEDTLKVWQIGHPPSERRGASRSIFGHIDFLGKGATTPAEDEEYARRIQDFPHVSFVVI 300
Query: 290 SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG 349
SD+WLD+ + + L VLD P LFVF G+F S F LG
Sbjct: 301 SDLWLDHPKTLIGLRSVLDRCVETGFTPFLFVFCGSFTSRGIGSGGAGIEQYTDNFSALG 360
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
++A++ + S FLF+PGP D ST LPR A+P+ L+ +P A+F SNPCR+
Sbjct: 361 DLLASYREISAVSHFLFVPGPLDPWGSTTLPRPAIPEPFVARLKARLPRAVFLSNPCRVK 420
Query: 410 FL 411
F
Sbjct: 421 FF 422
>gi|384493557|gb|EIE84048.1| hypothetical protein RO3G_08753 [Rhizopus delemar RA 99-880]
Length = 486
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 101/319 (31%), Positives = 172/319 (53%), Gaps = 9/319 (2%)
Query: 95 VIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS 154
V++AF +PK YD + F + S + + K + R+R++L QR+ R++ F
Sbjct: 54 VVNAFDIPKLEYDDFTRTFRKSKSSCNLLSQPREKTEMIRERYVLAKQRLLRNETFRPAE 113
Query: 155 FDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKIT 213
+ +S + + +I+ I+SL+GQ G+ +V+ G+++Q+ DG YLED A +E+D+S++K
Sbjct: 114 MSISDSAYFT-KITPIKSLIGQDGKDFVLFGMLTQITDGKLYLEDDDAYIELDVSQSKYG 172
Query: 214 TGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTL 272
G FT+ + EG D IF V PP E RD + +L DFFG L E+ L
Sbjct: 173 YGLFTDGAFAIVEGTFGEDHIFHVSEINLPPAEARDMTDAILNNIDFFGLPKPLVDENLL 232
Query: 273 RLADLEKRAANDM-FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC 331
+ E+R D+ FVI+SD+ LD +V+ L + + + + VP +F+G+F S P
Sbjct: 233 K---KEERIHEDIFFVIISDVRLDQPKVLDGLRTMFNEYNN--QVPLAIIFIGSFTSKPF 287
Query: 332 NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEE 391
S + +F L +I+ + L H+ F+F+PG D +LP+ LP
Sbjct: 288 TASSEDVVEYKDKFNALADLISEYDELATHTNFVFVPGAGDPWGGQILPQSPLPLSFVTR 347
Query: 392 LQKYIPNAIFSSNPCRLNF 410
+++ + A F++NPCR+ +
Sbjct: 348 IKQKVKKAHFTTNPCRIRY 366
>gi|353234438|emb|CCA66463.1| related to DNA polymerase epsilon subunit B [Piriformospora indica
DSM 11827]
Length = 542
Score = 177 bits (448), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 109/362 (30%), Positives = 186/362 (51%), Gaps = 10/362 (2%)
Query: 58 SSIIDKESVNRV-TSVLLQAEAAAEGDS---GSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
++I+ K + R SV+ ++ A G S G+ + I+AF +P++ Y +K F
Sbjct: 60 TTIVTKPLLQRAYESVVEKSTATVAGSSQIAGTLEPDHHLHFINAFEMPRWHYSQERKSF 119
Query: 114 YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSL 173
+ A + G A +KA RDR ++ Q V R+++FS P+F ++++ ++L
Sbjct: 120 ERAAAKPSLAGSAESKAVFLRDRHNIIKQIVLRNENFSPPAF-AGKDRANYLKLTSTRNL 178
Query: 174 VGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
+G+ G R+++ G++++ +G LEDL V +D+S + GFFTE V+ EG+ +
Sbjct: 179 LGRAGGRFLLFGMLTRSPEGRLCLEDLDGVVPLDISATGPSEGFFTEGCFVLVEGDYSDE 238
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG--TLKKEDTLRLADLEKRAANDMFVILS 290
V+ G PP E R + + DF G G T+ ++D A+ ++LS
Sbjct: 239 ETLVVVAVGHPPTERRRIARGIYGHVDFLGKGNTTVLEDDNWAKQAARPENADITLLVLS 298
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
D+ LD+E + L + + EV+P +F+ G+F S + F LG
Sbjct: 299 DVHLDDERTLKGLRKLFEQAVEAEVIPKIFILCGDFTSGNIKNDIE-MDRYKDGFTSLGD 357
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIP-NAIFSSNPCRLN 409
+I P +K +S FLF+PGP+D S VLPR +P T L+ +P A+F++NPCR+
Sbjct: 358 LILEFPSIKRYSHFLFVPGPNDPWSSEVLPRRPIPTAFTNRLEAKLPKTAVFATNPCRIK 417
Query: 410 FL 411
F+
Sbjct: 418 FM 419
>gi|358060440|dbj|GAA93845.1| hypothetical protein E5Q_00491 [Mixia osmundae IAM 14324]
Length = 568
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 208/414 (50%), Gaps = 19/414 (4%)
Query: 12 KMKIRGYGLRM--DALDEILSFVNRFPDAEDEAIDLLLDQFEH---ESSLKSSIIDKESV 66
K+ R Y L + +A++ + V +F A+ + D + D E SSI+ ++++
Sbjct: 12 KVFTRTYSLTLKSEAIEWLEDLVEQFEIADQDVADTM-DHIASSFVEGEDNSSIVTRDAL 70
Query: 67 NRVTSVLLQAEAAAEGDSGS---------ASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
+RV L + A DS S + ++VI+AF +P+ + KK F + A
Sbjct: 71 DRVYKRLQASNGPAAPDSPSMAMEQDDEDSDTAQYLKVINAFDMPRINWSFEKKAFERAA 130
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQT 177
+ G A++KA RDRF + Q + R ++F P+ + +I+++++L+G+
Sbjct: 131 AKPSMVGAATSKAQYLRDRFGIAKQVILRSEYFCPPAVGG-HDRNSYPKITSVKNLLGRQ 189
Query: 178 GRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQ 236
G + + G++++ E G F LEDL V +D S+A+ T+ + V+ G + IF
Sbjct: 190 GGDFTLFGLLARTEIGQFCLEDLDDRVVLDFSEARQLVKMITQGSFVLVFGRFTSESIFF 249
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
V PP E R+ + + DF G G L + RL EK N FV++SD++L+
Sbjct: 250 VSEITHPPAEGRNVTKTIFGHVDFLGTGALTHTEETRLLASEKAQPN-AFVVISDLFLNQ 308
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
+V+ K +L + + +P++FV GNF S P L S + F L +++ + P
Sbjct: 309 PKVLLKFRAMLQALVTADAIPAVFVLCGNFSSIPFLLDGKSTLAYTQYFSALAEILLSFP 368
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
++ + + F+ +PGP D + LPR LP + + L K IP F++NPCR+ +
Sbjct: 369 QVLQQAHFVLVPGPHDPFDTMTLPRPPLPAPIVKALMK-IPKITFATNPCRITY 421
>gi|345489517|ref|XP_001602987.2| PREDICTED: DNA polymerase epsilon subunit 2 [Nasonia vitripennis]
Length = 521
Score = 174 bits (440), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 205/420 (48%), Gaps = 40/420 (9%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEA-----IDLLLDQFEHESS 55
MS KK+ + G + I + PD + ++ ++ +L Q +
Sbjct: 1 MSDNLVKKVHAAFDLYGLSITKKLCATIAKHLQNNPDLDPKSWLTKVVEQILTQ-----N 55
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
L ++ ++ E++ + ++ E+ + + S + VID F VPK YD KK +
Sbjct: 56 LPTAQVELENIKQALKECVKPESTLK------ESESVLNVIDVFTVPKVVYDLNKKKYVL 109
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
+ + +A K+ ++++R LL+ R + F+ F +E ++ I+ L+
Sbjct: 110 QKINEELFPDAKYKSLVFKERLDLLWYRTLKHATFAPSKFG--KTEENKLQLVPIEYLLS 167
Query: 176 QTGRR--WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
++ + VMG+++QL++G +YLED SV+I+L E +IVVA+G +DG
Sbjct: 168 ESKTKDVCVMGLLAQLKEGQYYLEDYGGSVKINLK----------EGSIVVAKGRY-IDG 216
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGG---TLKKEDTLRLADLEKRAANDMFVILS 290
+ +V FPP E + S + FGG LK + L+ + +A + + +S
Sbjct: 217 VLRVENIDFPPPEVSESSRANFGDANTFGGSHPILLKLSEKLKAYEDANKA--NFLIFVS 274
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
+ W+DNE ++ K +V + G+ + P FV G+F S P S S L+ F KL
Sbjct: 275 EFWVDNEAILNKFKVCMSGYS--DTPPVAFVICGHFLSSPA--SMDSVKKLKEGFKKLAG 330
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
MI P + +H+ F+F+PGP D +LPR LPKY+ E+ K +P ++NPCR+ +
Sbjct: 331 MITEFPLIHQHTEFIFVPGPFDLSAPKILPRPPLPKYIMEDFMKVVPKTRLATNPCRIQY 390
>gi|196008689|ref|XP_002114210.1| hypothetical protein TRIADDRAFT_27613 [Trichoplax adhaerens]
gi|190583229|gb|EDV23300.1| hypothetical protein TRIADDRAFT_27613 [Trichoplax adhaerens]
Length = 527
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 190/379 (50%), Gaps = 22/379 (5%)
Query: 40 DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAF 99
+E + L++D + + S S+IIDK RV S + + + + + N VI+ F
Sbjct: 44 NENLQLIIDALQRQPS-SSTIIDK---GRVESAIQECQQNSHDEQSKIFN-----VINIF 94
Query: 100 LVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVN 159
PK+ Y++ KK F + G A KAA +R+R+ L++QR R F S N
Sbjct: 95 KTPKYYYNTEKKKFLRGNDDTNTFGLAKDKAAYFRERYNLIYQRTIRHDLFCPSSTGNKN 154
Query: 160 ----SEFGSCEISTIQSLVGQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKI 212
+ E+ +I+ L+ + + V+G+I++ +G F LED+ V++D+SK
Sbjct: 155 IDKYRQQQQFELKSIEYLLSTSRIEDKIVVLGMITRHREGGFALEDITGIVKLDISKTLF 214
Query: 213 TTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG-TLKKEDT 271
G FTE V+AEG + D +F+ GFPP E + + FGG T + +
Sbjct: 215 HAGLFTEACFVLAEG-VYEDDVFRASAIGFPPAEPAKSFYRHFGDINLFGGPFTRSFKFS 273
Query: 272 LRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC 331
+ L +E+ + M + LSD+WLD V+ KL + G+ + P F+ +GN+ S P
Sbjct: 274 INLKAVEEHNSGTMLIFLSDVWLDQSSVLDKLRTLFAGYSNAP--PMAFILIGNYLSTP- 330
Query: 332 NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEE 391
+ ++ L +I P +KE S F+F+P D G +LPR LP+ +T +
Sbjct: 331 -YGYKESKIMKECLQTLADLICEFPNIKERSHFVFVPSIHDVGFGNILPRPPLPESVTAD 389
Query: 392 LQKYIPNAIFSSNPCRLNF 410
+++ +P F+SNPCR+ +
Sbjct: 390 IRERLPWVDFASNPCRIQY 408
>gi|326426544|gb|EGD72114.1| hypothetical protein PTSG_00131 [Salpingoeca sp. ATCC 50818]
Length = 564
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 134/439 (30%), Positives = 214/439 (48%), Gaps = 54/439 (12%)
Query: 9 IQKKMKIRGYGLRMDA---LDEILSFVNRFPDAE--DEAIDLLLDQFEHESSLKSSIIDK 63
I++K K G L+ A L + LS V R D +A+ L+LD + +LKS+ ID+
Sbjct: 13 IRRKFKTSGLLLQRPARELLQDALSAVAREQDFAHVQKALSLVLDNI-NTLTLKSNAIDR 71
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
+++ +V S L + G + ++++AF VP F YD KK F H + +
Sbjct: 72 DTMEQVLSAL----NNSGGTTSVLDRTKMFQIVNAFEVPAFDYDPDKKRFLPHKTAPTLA 127
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG-------- 175
+A AK+A++R RF + QR+ R + F+ + NS + +++T+ +L+G
Sbjct: 128 ADADAKSAMFRHRFNAIRQRLLRRKEFA--THASANS--AAIKLTTVDALLGLSSSEFDD 183
Query: 176 ------------------QTGRRW------VMGVISQLEDGHFYLEDLAASVEIDLSKAK 211
+ RR V+G+IS L++ +LED VE+ + A
Sbjct: 184 DDDSDSDANELDEDGVVERAQRRTKGPLVTVLGMISLLQEDKCFLEDPDGKVELVVQNAV 243
Query: 212 ITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT 271
TE +I++ EG + D PP E R Q+ + +G +FFGG K++D
Sbjct: 244 FPDALLTETSIILVEG-VYRDRKLYAHNIASPPAEPRAQTDNVFSGTNFFGGH-FKEDDR 301
Query: 272 LRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC 331
L + E+ + MFVILSD+WLD EV+ KL + +G+ E ++ MGNF S P
Sbjct: 302 AALIE-EEMTQDSMFVILSDVWLDKPEVLAKLRTLFEGYSGAEPETVKYILMGNFLSAPY 360
Query: 332 NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEE 391
+ +L F +L +IA + S + +PGP D G ++LPR LP LT
Sbjct: 361 GKD--ARQTLEQCFNELADIIA---QFNITSDIVLVPGPLDPGSPSILPRPPLPTTLTRR 415
Query: 392 LQKYIPNAIFSSNPCRLNF 410
+ +PNA F++NP RL F
Sbjct: 416 FRTRVPNATFTTNPARLRF 434
>gi|401882688|gb|EJT46935.1| epsilon DNA polymerase [Trichosporon asahii var. asahii CBS 2479]
Length = 591
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/366 (29%), Positives = 183/366 (50%), Gaps = 25/366 (6%)
Query: 58 SSIIDKESVNRVTSVLL--QAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
SS++ E + R +L + E D + + V+D+F +P R+D ++ F
Sbjct: 46 SSLVSLEGLKRAYEILQLGTVDDTQEADPSEVNVEAHFSVVDSFNMPPVRFDPVRAAFSV 105
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
I G+A+++++ R+R+ ++ + + R+++F+ P+ + + ++++ ++L+G
Sbjct: 106 AKRKPSIAGQAASRSSYLRERWGIIREIILRNENFTPPALGGQDRD-NYLKLTSTRNLLG 164
Query: 176 QTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
+ G+ +++ G++S+ +G LED V +D+ A G FTE +V+ EGE VD
Sbjct: 165 RAGQLFLLFGMLSRNPEGRLTLEDGDGRVVLDMEDAVPGEGLFTEGCMVLIEGEYTVDDT 224
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
+V+ G PP E R + L DF GGG + ++ + FV+LSD+WL
Sbjct: 225 LRVLAMGHPPSEKRHIARGLHGHVDFLGGGAMSVKEEKKYQPTVLANTQVSFVVLSDVWL 284
Query: 295 DNEEVMGKLEVVLDGF-ESVEVVPSLFVFMGNFCSH---------PCNLSFHSFSSLRLQ 344
D+ + L + +G+ E+ E P +FV GNF C F++ + L L
Sbjct: 285 DHPSTLVALRRLFEGYAEAAEYRPMVFVLCGNFVQRGWEGEGGLKQCTNGFNALTDLILS 344
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
F L Q S F+F+PGP D T LPR ALPK T+ L IP A F SN
Sbjct: 345 FPLLLQ-----------SHFVFVPGPLDPWTGTTLPRPALPKNFTQRLASRIPKAKFVSN 393
Query: 405 PCRLNF 410
PCRL +
Sbjct: 394 PCRLRY 399
>gi|49900773|gb|AAH76287.1| Pole2 protein [Danio rerio]
Length = 341
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 140/227 (61%), Gaps = 7/227 (3%)
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPP 244
+I+QL +G FYLED + +V++D+SKA++ +G +TE+ V+AEG D +F V GFPP
Sbjct: 1 MITQLREGKFYLEDPSGTVQLDISKAQLHSGLYTESCFVLAEG-WYEDSVFHVSAFGFPP 59
Query: 245 LEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
E + +FFGG + + + +L LE+ + MFV++SD+WLD+ EV+ K+
Sbjct: 60 TEPSSFTRAYFGNVNFFGGPSSTAVKASAKLKQLEEENEDAMFVLVSDVWLDSVEVLEKI 119
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363
+ G+ ++ P+ F+F G+F S P + SLR F L +I P + SR
Sbjct: 120 HTMFSGYSALP--PTCFIFCGSFSSAPYGRT--QLRSLRDSFKALADLICEFPSIHS-SR 174
Query: 364 FLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
F+F+PGP+D GP VLPR L +++TEE Q+ +P ++F++NPCR+ +
Sbjct: 175 FVFVPGPEDPGPGAVLPRPPLAEHITEEFQQRVPLSVFTTNPCRIQY 221
>gi|392573772|gb|EIW66910.1| hypothetical protein TREMEDRAFT_45435 [Tremella mesenterica DSM
1558]
Length = 540
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/330 (30%), Positives = 174/330 (52%), Gaps = 5/330 (1%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
D + + V+DAF +P +D+++ F + + G+AS++AA R+R+ ++ +
Sbjct: 88 DPSEVNIETHFSVVDAFDMPAVHFDAVRGGFTTSKHTPSLAGQASSRAAFLRERWGIIKE 147
Query: 143 RVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAA 201
+ R+++F+ P+ + + ++++ ++L+G+ G+ +++ G++S+ +G LED
Sbjct: 148 IILRNENFTPPAIAGHDRD-NYLKLTSTRNLLGRVGQLFLLFGMLSRDPEGRLCLEDGEG 206
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
V +D+ A G FTE +V+ EGE +D +V+ G PP E R+ + L DF
Sbjct: 207 RVRLDMDDAVPGEGMFTEGCMVLIEGEYTIDETIRVLAMGHPPSEKREVARSLHGHVDFI 266
Query: 262 GGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-ESVEVVPSLF 320
GGG + ++ + FV+LSD+WLD+ + L + +G+ ESVE P F
Sbjct: 267 GGGAISLKEEQKFLPTVAVNTQVSFVVLSDVWLDHPRCLPALRKMFEGYAESVEFRPMAF 326
Query: 321 VFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLP 380
V GNF F L ++ + P L+ S F+F+PGP D S+ LP
Sbjct: 327 VLCGNFSQKGWETE-EGLKRYSNGFNALTDLLVSFPLLQS-SHFIFVPGPLDPWSSSTLP 384
Query: 381 RCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
R ALP L+ L++ +PN F SNPCR+ +
Sbjct: 385 RPALPSLLSARLKQRLPNVHFVSNPCRIRY 414
>gi|291403818|ref|XP_002718342.1| PREDICTED: DNA-directed DNA polymerase epsilon 2 [Oryctolagus
cuniculus]
Length = 474
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 120/417 (28%), Positives = 194/417 (46%), Gaps = 77/417 (18%)
Query: 4 QTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
+ R ++ K+RG LR +A L E L VN + ED +D ++D E + L SS+
Sbjct: 5 RVRSRVLSAFKLRGLLLRGEAIKYLTEALQSVNEV-ELED-VLDRIIDAVEKQP-LSSSM 61
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHF----Y 114
I++ V E A + S S +I AF +P+F Y++ +K F
Sbjct: 62 IERSVV----------ETAVQECSKSVDETIEHIFNIIGAFDIPRFVYNTERKKFLPLLM 111
Query: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLV 174
+ + + G A KA L+R+R+++L Q
Sbjct: 112 TNHPAPNLFGTARDKAELFRERYIILHQ-------------------------------- 139
Query: 175 GQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI 234
G F+LED +V++DL+KA+ +G +TE V+AEG D +
Sbjct: 140 -----------------GKFFLEDPTGTVQLDLTKAQFHSGLYTETCFVLAEG-WFEDQV 181
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIW 293
F V GFPP E + +FFGG + + + +L LE + MFV +SD+W
Sbjct: 182 FHVNAFGFPPTEPSSTTRAYYGNINFFGGPSSTSVKTSAKLKQLEDENKDAMFVFISDVW 241
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353
LD EV+ KL + G+ P+ F+ GNF S P + +L+ L +I
Sbjct: 242 LDQVEVLEKLHTMFSGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDALKTLADIIC 297
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + + SRF+F+PGP+D G ++LPR L +T E ++ +P ++F++NPCR+ +
Sbjct: 298 EYPNIHQSSRFVFVPGPEDPGFGSILPRPPLADSITNEFRQRVPFSVFTTNPCRIQY 354
>gi|312383313|gb|EFR28452.1| hypothetical protein AND_03592 [Anopheles darlingi]
Length = 524
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 120/413 (29%), Positives = 202/413 (48%), Gaps = 25/413 (6%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
+ +I + I G+ +R DA + + + E + + +L I++++
Sbjct: 8 KSQISSRFSIGGFQIRSDASTFLAQQIQPLSETERKTWITNVANHVQSQNLAQPIVERKH 67
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS--LPIH 123
+ + EA+ ++G + +VI AF VP F Y KK F S L +
Sbjct: 68 IEQAIK-----EAS---NTGLDDAETVFQVISAFEVPSFVYVEEKKKFLPAPTSTKLQLL 119
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEIS--TIQSLVGQTGRRW 181
G AK+ R+R+L+L+Q+ R + FS+ S + G +++ +++L+ +
Sbjct: 120 GPPDAKSNYLRERYLMLWQKTHRHEMFSQRSTPGTITGTGKSKLTLRKVENLLSTSKMND 179
Query: 182 V--MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V +G+++QL +G FYLED SV IDLS + G F E V+A G+ DG ++
Sbjct: 180 VVMLGLLTQLTEGRFYLEDPTGSVPIDLSTTAFSAGLFCEGCFVLACGK-FRDGTLKIEE 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGG--GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
GFPP E S + +GG TL K ++ LA+LEK + + +SD WLD+
Sbjct: 239 IGFPPPELAASSRAFFGSVNSWGGPSKTLLK-NSRNLAELEKGNPDHSLIFVSDCWLDSA 297
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
EVM KL+ +L G++ + P V MG F N+ L+ +F LG++++ +
Sbjct: 298 EVMEKLKQLLKGYD--DFPPVAIVLMGPFGKQQDNVY-----GLKNRFQMLGELLSTCEK 350
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
LK + + +P DD + +LPR +P + EL K P I ++NPCRL +
Sbjct: 351 LKAQTDLVLVPSCDDPAAANILPRPPIPNAIAGELVKRYPRTILATNPCRLQY 403
>gi|170045263|ref|XP_001850235.1| DNA polymerase epsilon subunit 2 [Culex quinquefasciatus]
gi|167868222|gb|EDS31605.1| DNA polymerase epsilon subunit 2 [Culex quinquefasciatus]
Length = 520
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/419 (31%), Positives = 203/419 (48%), Gaps = 35/419 (8%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDK 63
+ + +I + I GY +R DA + ++ PDAE + + L +++K
Sbjct: 6 KIKTQIVSRFNISGYQIRSDASIFLAQYIAPMPDAERKRWLTSITGHVQGQGLDLPVVEK 65
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
+ L EA+ ++G N S VI+AF VPKFRY K+ F LP+
Sbjct: 66 RHIE-----LAIKEAS---NTGLEDNESVFSVINAFDVPKFRYCEEKRKF------LPVS 111
Query: 124 GEAS--------AKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
G KA RDR+++L+Q+ SR + F+ +V + + I++L+
Sbjct: 112 GGPKRDLLPGPDMKAEYIRDRYMMLWQKTSRHEMFNASKDGMVGNSVKRLTLRKIETLLA 171
Query: 176 QTGRRWV--MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
+ V +G+++QL +G FYLED V IDLS+ ++G F E V+A G+ DG
Sbjct: 172 TSKMNEVVILGLLTQLTEGKFYLEDPTGVVPIDLSETVFSSGLFCEGCFVLACGK-FRDG 230
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGG--TLKKEDTLRLADLEKRAANDMFVILSD 291
+V GFP E S + +GG TL K + LA+LEK D V LSD
Sbjct: 231 TLKVEEMGFPVSELASSSRAYFGTMNTWGGRSRTLLKA-SRNLAELEKTNREDSIVFLSD 289
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM 351
WLDN V+ KL+++L G+ E P V MG F ++ +S L+ +F LG++
Sbjct: 290 CWLDNPVVLDKLKLLLQGYN--EFPPIAIVLMGPFS----KMTEDPYS-LKGRFAALGEI 342
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+A LK + + +P DD + +LPR LP L +L+K P ++NPCRL +
Sbjct: 343 LAGCEGLKMQTEIVLVPSCDDPTAANILPRPPLPDCLVTDLKKRYPRITLATNPCRLQY 401
>gi|347972280|ref|XP_315206.3| AGAP004614-PA [Anopheles gambiae str. PEST]
gi|333469325|gb|EAA10562.3| AGAP004614-PA [Anopheles gambiae str. PEST]
Length = 521
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 120/411 (29%), Positives = 200/411 (48%), Gaps = 23/411 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
+ +I + + G+ +R +A + + DAE + + L +I+K+
Sbjct: 8 KSQIVSRFSLGGFQIRSEASTFLAQQLQPLNDAERKKWITNVANHVQGQCLNLPVIEKQH 67
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ L EA ++G + RVI AF VP F Y + KK F +
Sbjct: 68 IE-----LAIKEA---NNTGLDDTETIFRVISAFEVPSFVYCAEKKKFLPDTNKRSLLAT 119
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEIS--TIQSLVGQTGRRWV- 182
K++ R+R+ LL+Q+ SR + FS+ + + + ++S +++++ + V
Sbjct: 120 PDGKSSYIRERYWLLWQKTSRHETFSQRTTPGMEAPGNRNKLSLRKVENILSTSKMNDVV 179
Query: 183 -MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241
+G+++QL +G +YLED S+ ID+S A + G F E ++A G+ DG+ +V G
Sbjct: 180 LLGLLTQLTEGRYYLEDPTGSIPIDISTATYSPGLFCEGCFLLAYGKYR-DGVLKVEEIG 238
Query: 242 FPPLEDRDQSLKLLAGYDFFGG--GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
FP E S + +GG TL K + L DLEK V LSD WLDN V
Sbjct: 239 FPMPELATNSRAFFGTVNSWGGPSKTLLKY-SRNLNDLEKANVEHSLVFLSDCWLDNPIV 297
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
M KLE +L G++ + P V MG F S + +L+ F KLG+++++ +LK
Sbjct: 298 MEKLEQLLRGYD--DFPPVAIVLMGPFAR-----SIENVYTLKGHFVKLGEILSSCEKLK 350
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + +P DD + +LPR +P+ L EL+K P I ++NPCRL +
Sbjct: 351 SQTDLVIVPSIDDPAAANILPRPPVPEALAGELKKRFPRTILTTNPCRLQY 401
>gi|388582478|gb|EIM22783.1| hypothetical protein WALSEDRAFT_54005 [Wallemia sebi CBS 633.66]
Length = 821
Score = 168 bits (426), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 104/331 (31%), Positives = 173/331 (52%), Gaps = 17/331 (5%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++++DAF +P++ Y K F + + + G ++ + L+ DR+ ++ Q + R++ FS
Sbjct: 104 LKIVDAFHMPRYNYTVDNKSFTKQP-TQSVAGSPASLSQLWLDRYNIIKQIILRNEFFSP 162
Query: 153 PSFDVVNSEFGS----CEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDL 207
PS +N+ +I++ ++L+G+ +R+++ G++SQ DG L+D V +DL
Sbjct: 163 PS--TINASSHDRDKYMKITSTKNLLGRLNQRFMLFGMLSQTVDGRHALQDPDGVVVLDL 220
Query: 208 SKAKITTGFFTENTIVVAEGEMLVDG---IFQVITCGFPPLEDRDQSLKLLAGYDFFGGG 264
A G FTE + V+ +G +++ +F+ G PP E R S + DF G G
Sbjct: 221 DDAVPGEGLFTEGSFVLVDGMYILETEEPVFKAYGIGHPPSEKRSASQSVHGHVDFLGLG 280
Query: 265 TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVF 322
+ +D +EK + F++LSD+WL+ L + +G+ + + P LFV
Sbjct: 281 GISIKDQKLYKRIEKSLDHIGFIVLSDVWLNELSTQLSLRRLFEGYNNAFNDFRPLLFVL 340
Query: 323 MGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD---AGPSTVL 379
GNF S P S + F KL +I P + +HS F+FIPGP+D +G ST L
Sbjct: 341 CGNFSSQPITTS-REIREYQDSFSKLADIICEFPIISQHSTFVFIPGPNDPWSSGTSTTL 399
Query: 380 PRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
PR LPK T E + IP FSSNP R+ +
Sbjct: 400 PRTRLPKAFTREFESRIPRTHFSSNPTRIRY 430
>gi|157132083|ref|XP_001662454.1| DNA polymerase epsilon subunit b [Aedes aegypti]
gi|108881739|gb|EAT45964.1| AAEL002785-PA [Aedes aegypti]
Length = 516
Score = 166 bits (419), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 166/332 (50%), Gaps = 12/332 (3%)
Query: 82 GDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLF 141
++G N + VI+AF VP+F + KK F +G KA R+R+L+L+
Sbjct: 76 NNTGLEDNETIFSVINAFDVPRFHFHEEKKMFMPDSGKRGFFPGPDTKAEYIRERYLMLW 135
Query: 142 QRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR--WVMGVISQLEDGHFYLEDL 199
Q+ R + F+ + + I+ L+ + + V+G+++QL +G FYLED
Sbjct: 136 QKTCRHEMFNTSKVSTYK-DIKRLTLRKIELLLSTSKMKEVVVLGLLTQLTEGKFYLEDP 194
Query: 200 AASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYD 259
V IDL + ++G F E V+A G DG ++ GFP E S +
Sbjct: 195 TGVVPIDLRETVYSSGLFCEGCFVLASG-TYSDGTLKIDELGFPVTELASSSRAFFGTVN 253
Query: 260 FFGGGTLKKEDTLR-LADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPS 318
+GG + R LA+LE+ + D V L+D WLDN V+ KL +LDG+ + P
Sbjct: 254 TWGGRSKSLLKYSRNLAELERNSGEDSIVFLADCWLDNPIVLQKLTQLLDGYN--QFPPR 311
Query: 319 LFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV 378
V MG F S + +L+ +F LG+ + ++ LK+ + + +P +D + +
Sbjct: 312 AIVLMGPFSK-----STENPYALKERFQALGETLGSYESLKKETDVVLVPSSEDPTTANI 366
Query: 379 LPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
LPR LP+YLT +L+K P + ++NPCRL +
Sbjct: 367 LPRPPLPEYLTGDLKKSYPRLVLATNPCRLQY 398
>gi|242014786|ref|XP_002428066.1| DNA polymerase epsilon subunit, putative [Pediculus humanus
corporis]
gi|212512585|gb|EEB15328.1| DNA polymerase epsilon subunit, putative [Pediculus humanus
corporis]
Length = 524
Score = 164 bits (415), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 120/412 (29%), Positives = 202/412 (49%), Gaps = 20/412 (4%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEIL-SFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
+ RK I K +K+ G+ +R DA D + F+N E +D L DQ +L+S ++
Sbjct: 6 EIRKWIIKILKLHGFLIRGDAADYLAQKFLNLSQQKRIEILDKLSDQIRG-LTLESPTVN 64
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP- 121
KE + + L ++E + VI+AF VP F Y+ KK + + L
Sbjct: 65 KEQIEQCYKESLLERPSSE---------TTWNVINAFEVPCFIYNREKKKYIKDDTVLKK 115
Query: 122 -IHGEASAKAALYRDRFLLLFQRVSRDQHFSRP-SFDVVNSEFGSCEISTIQSLVGQTGR 179
I +A+ K + + + L Q+ R+ + + N +F + +
Sbjct: 116 GIFADAATKIFIKKRIYTSLIQKTLRNNLLKEVFAINGKNVQFIFKTVEWFLCATEKIDY 175
Query: 180 RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
++G++ Q DG++ +ED +++ID+S+A + G FTE++ V EG D +F V
Sbjct: 176 AVILGLLVQKIDGNYAVEDDTGTLDIDISEAIFSDGLFTEHSFVFLEG-CYEDKVFYVSK 234
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLKK-EDTLRLADLEKRAANDMFVILSDIWLDNEE 298
G P E +S + FGG +L ++ L ++E++ ++M V +SD+WLD E
Sbjct: 235 FGLPLPESSKKSRMFFDDMNTFGGPSLYSLSNSKALKEIEEKNPDEMIVFISDVWLDKPE 294
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
V+ KL+++ DGF E P FV +GNF S P ++ S L F +LG ++ ++ +
Sbjct: 295 VLKKLKILFDGFS--EYPPYAFVLLGNFISSPKGPNYCS--ELINGFNELGNLLESYKNI 350
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
S+F+ +PGP D G +LPR K L + L IP +NPCRL +
Sbjct: 351 INTSKFVLVPGPFDVGSPRILPRPPFSKNLVKGLISKIPYLTLGTNPCRLQY 402
>gi|403416464|emb|CCM03164.1| predicted protein [Fibroporia radiculosa]
Length = 541
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 118/427 (27%), Positives = 199/427 (46%), Gaps = 18/427 (4%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M ++ I K + G+ L +AL+ + ++R + DE ++ ++ E + +
Sbjct: 1 MVAPRQRPIIKVFRKYGHSLGPEALEFLEEILDRH-EVADEDVEFSIEWIAKEYNKQDDA 59
Query: 61 IDKESVN---RVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQH- 116
K S++ RV + + +EG S + IDAF +P + + + F +
Sbjct: 60 QMKVSLDVLKRVYNTFQGSVDQSEGAPDMLDPESQLHFIDAFDMPLWHWSHERSAFERQD 119
Query: 117 --------AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEIS 168
+GSL I G A ++ R+R ++ Q V R+ HFS + + E +
Sbjct: 120 HTFPWRRASGSLTIAGTADSRVMAMRNRLNIIRQTVLRNDHFSPSTLPSRDRE-NLLTLR 178
Query: 169 TIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAE 226
+ + L+G+ G R+++ G++ ++G LED SVE+D S+ + + G FTE + E
Sbjct: 179 STKQLLGRAGERFLLFGMLCHNKEGKLCLEDQDGSVELDFSQLDQPSEGLFTEGCFALVE 238
Query: 227 GEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDM 285
GE D I VI G PP E R+ + + DF G G T EDT A + +
Sbjct: 239 GEYTEDAILVVIAVGHPPCESRETARSIYGHVDFLGQGATTLLEDTHLAARVRLELPDLR 298
Query: 286 FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQ 344
F +LSD+WLD+ E + L + D +P + V GNF S + + + Q
Sbjct: 299 FFVLSDVWLDHPETLRGLRKMFDHCMENSFIPKVIVLCGNFSSRGISQGNSREVRRFQDQ 358
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
L +IAA+P + + +F+PGP D ++VLPR L L+ +P F++N
Sbjct: 359 LDSLADLIAAYPLITRTTHIVFVPGPLDVTVNSVLPRRPLMSSFVSRLKSRVPKVHFATN 418
Query: 405 PCRLNFL 411
PCR+ F
Sbjct: 419 PCRIKFF 425
>gi|390601039|gb|EIN10433.1| DNA polymerase epsilon subunit B [Punctularia strigosozonata
HHB-11173 SS5]
Length = 531
Score = 164 bits (415), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 114/419 (27%), Positives = 204/419 (48%), Gaps = 11/419 (2%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDE---AIDLLLDQF--EHESS 55
M+ ++ I K + + L + LD + +++ A++E ++DL+ ++ + +++
Sbjct: 1 MADSRQRAIIKVFRKYSHSLGPEVLDFLEDVLDKHEIADEEVESSMDLVAKEYNKQDDAT 60
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
+K S+ + V V + Q +++++ D + IDA+ +P + + + + F +
Sbjct: 61 MKVSLEVLQRVYEVLQGMRQGQSSSQ-DEEPLDPDGHLHFIDAYDMPLWHWSNERSTFDR 119
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
+ I G A ++ + RDR ++ Q V R++HFS + + E ST Q L+G
Sbjct: 120 STSAQTISGSADSRVSAMRDRLNIIRQTVMRNEHFSPSTLPSRDREHLLTLRSTKQ-LLG 178
Query: 176 QTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGEMLVDG 233
+ G R+++ G+++ ++G LED SVE+D S+ + + G FTE + + EG+ D
Sbjct: 179 RPGERFLLLGMLAHNKEGKLCLEDADGSVELDFSQLDQPSEGLFTEGSFALVEGDYTDDA 238
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDMFVILSDI 292
VI G PP E R+ + + DF G G T ED +++ + F LSD+
Sbjct: 239 TLIVIAIGHPPCESRETARSIFGHIDFLGKGATTLLEDAQYAVRIQRDLPDLNFFFLSDV 298
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQFGKLGQM 351
WLD+ + L + D VP + V GNF S + S H + F L +
Sbjct: 299 WLDHPTTLRGLRKMFDNCVESNFVPKVIVLCGNFSSKSISQGSAHDIQKYQENFESLADL 358
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
I ++P L + F IPGP D +T+LPR L +L+ +PN +NPCR+ F
Sbjct: 359 ILSYPILARTAHFALIPGPHDMTANTLLPRRPLLSSFVSKLRDKVPNIHIGTNPCRIKF 417
>gi|392592784|gb|EIW82110.1| DNA polymerase epsilon, subunit B [Coniophora puteana RWD-64-598
SS2]
Length = 530
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 105/354 (29%), Positives = 172/354 (48%), Gaps = 12/354 (3%)
Query: 66 VNRVTSVLLQAEAAAEG-DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
+ RV L A A+ D+ S + +IDAF +P + + + F + +G L I G
Sbjct: 68 LKRVYDTLQDQGADADALDAELLDPESHLHIIDAFEMPLWNWSQERGTFEKFSGPLTIAG 127
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM- 183
A + R+R ++ Q V R++HFS + + E ST Q L+G+ G R+++
Sbjct: 128 SADTRVMATRNRLHIIKQSVLRNEHFSPSTLPSRDRERLVTLKSTKQ-LLGRAGDRFLLL 186
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGF 242
G++ ++G +ED SVE+DLSK + G +TE + + EGE + +V+ G
Sbjct: 187 GLLVHNKEGKLCIEDSDGSVELDLSKLGEPGEGLYTEGCLALVEGEYTDENTLEVVAIGQ 246
Query: 243 PPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDM----FVILSDIWLDNEE 298
PP EDR+ + + DF G G+ L ++ +R D+ F LSD+WLD+
Sbjct: 247 PPCEDRETARSIYGHIDFLGKGSTS---LLEDSNFTRRIREDLSDLYFFFLSDVWLDDPR 303
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP-CNLSFHSFSSLRLQFGKLGQMIAAHPR 357
L+ + D + +P + GNF S + + F L +IA++P+
Sbjct: 304 TFVGLQKMFDNCVANSFIPKVIALCGNFTSRSLAQGNARDIQRYQENFDTLADLIASYPQ 363
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
+ + F+F+PGP D S LPR L T +L+ IP F++NPCR+ F
Sbjct: 364 VTRTTHFIFVPGPLDITSSGTLPRRPLLSTFTSQLKSKIPRVHFATNPCRIKFF 417
>gi|392568837|gb|EIW62011.1| epsilon DNA polymerase [Trametes versicolor FP-101664 SS1]
Length = 542
Score = 161 bits (407), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 107/381 (28%), Positives = 183/381 (48%), Gaps = 14/381 (3%)
Query: 40 DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNH------SAI 93
DE ++ ++ E + + K S++ + V EA GD+ A H S +
Sbjct: 38 DEEVEFSMEWMAKEYNKQDDAQMKVSLDVLNRVY---EAFQSGDNEGAQEHAVLDPDSHL 94
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
VIDAF +P + + S + F + +G L G A ++ R+R ++ Q V R+ HFS
Sbjct: 95 YVIDAFEMPSWNWSSERSTFERASGPLTSSGTADSRVTAMRNRLNVIKQCVLRNDHFSPS 154
Query: 154 SFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK-AK 211
+ + E + + + L+G+ G R+++ G+++ ++G LED VE+D ++ +
Sbjct: 155 TLPSKDRE-NLLTLRSTKQLLGRAGDRFLLFGMLTHSKEGKLCLEDPDGLVELDFTQLEQ 213
Query: 212 ITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKED 270
+ G FTE + + EG+ DG VI G PP E R+ + + DF G G T ED
Sbjct: 214 PSEGLFTEGCLALVEGDYTEDGTLLVIAIGHPPCESREAARSIFGHVDFLGKGATTLLED 273
Query: 271 TLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP 330
++ A+ F +LSD+WLD E + L + D +P + + GNF S
Sbjct: 274 KQLSTRVQLELADLRFFVLSDVWLDRPETLLGLRKLFDNCMENSFIPKVIILCGNFTSVG 333
Query: 331 C-NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLT 389
+ + F L +IA++P + + F+ +PGP D +++LPR L
Sbjct: 334 IPQGNGREVRRYQEHFDALADVIASYPLITRSTHFVMVPGPLDVTMNSILPRRPLLSSFV 393
Query: 390 EELQKYIPNAIFSSNPCRLNF 410
++ IPN F++NPCR+ F
Sbjct: 394 SRMKSRIPNVHFATNPCRIKF 414
>gi|380027429|ref|XP_003697426.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Apis florea]
Length = 493
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/323 (30%), Positives = 162/323 (50%), Gaps = 40/323 (12%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
+ + VID F VPK YD KK F S ++ EA K+ +++DRF LL+ R R + F
Sbjct: 85 TVLNVIDIFDVPKITYDLSKKKFILENISPDLYAEAQYKSTIFKDRFELLWYRTLRHELF 144
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA 210
+ P + E+++I+ L+ ++ + G+ Y+ D
Sbjct: 145 TPPKLGEKKENW--IELTSIEYLLSESKK------------GNVYVMD------------ 178
Query: 211 KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG---TLK 267
G E +IV+ G +G+ V G PP E + + + FGG +LK
Sbjct: 179 ----GLIMEASIVIVNGN-FQEGVLHVENIGLPPAESSNNARVDFGNTNTFGGSHNLSLK 233
Query: 268 KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
+ L++ E+ + M V +S+IWLD+ V+ K + +++G+ E P FV G+F
Sbjct: 234 FSEKLKI--FEESNKDGMIVFVSEIWLDDVTVLRKFKTMIEGYS--ECPPIAFVLCGHFL 289
Query: 328 SHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKY 387
S N+S S L+ L +I +P +K+ S+F+F+P DD G +LPR LPK+
Sbjct: 290 SFSTNIS--SKHKLKKGLKNLADIIIQYPDIKQTSKFIFVPASDDIGSPKILPRSPLPKH 347
Query: 388 LTEELQKYIPNAIFSSNPCRLNF 410
LTE+ +K IP AIF++NPCR+ +
Sbjct: 348 LTEDFRKNIPGAIFTTNPCRIQY 370
>gi|195021422|ref|XP_001985392.1| GH17033 [Drosophila grimshawi]
gi|193898874|gb|EDV97740.1| GH17033 [Drosophila grimshawi]
Length = 526
Score = 160 bits (404), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 118/414 (28%), Positives = 196/414 (47%), Gaps = 24/414 (5%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDK 63
Q RK+I K+ G+ +R + + + F AE E ++ + L + +++
Sbjct: 6 QLRKRITNSFKLSGFLIRSENSIYLAEQLLPFEPAEREKWMTVITENLQGQKLATPHVER 65
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
E++ + + L + G + +IDAF VP+FRY+S K F + +
Sbjct: 66 EALEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNSRIKKFERDGQPRSLL 117
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGR 179
E KA + R+ +L Q+ R F+ P+ D V SE + ++ ++L+ +
Sbjct: 118 SEPRMKADYLQQRYAMLLQKTLRHDLFA-PAVIQDGVASEAQTKKFKLQFAENLLATSNL 176
Query: 180 R--WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
+ ++G+++QL++G FY+ED V++DLS A+ GFF E V+AEG +GI +V
Sbjct: 177 KEAVILGLLTQLKEGKFYVEDPTGCVQLDLSGARYHAGFFCEGCFVLAEGSY-ANGILKV 235
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDN 296
GFPP E S + +GG + K + + RL +LE+ V LSD+ LD
Sbjct: 236 DGLGFPPAEPASSSRAFFGTGNTWGGESAKLLKYSPRLQELERSNTETTLVFLSDVRLDL 295
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
VM KL + G++S P V MG F + S + LR LG + A
Sbjct: 296 PVVMEKLRQLFVGYDSCP--PQAIVLMGAFTA-----STRNHHELRQHLDALGALAAGCD 348
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+LK+ + + +P +D + PR LP+ L L K P ++NPCRL +
Sbjct: 349 QLKKQTDLILVPSAEDPTAPNIFPRAPLPECLAAGLLKAWPRTQLATNPCRLQY 402
>gi|383849187|ref|XP_003700227.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Megachile
rotundata]
Length = 492
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 106/347 (30%), Positives = 167/347 (48%), Gaps = 46/347 (13%)
Query: 69 VTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASA 128
V ++ L E D+ A+ + + VIDAF +PK +YD KK F + ++ EA
Sbjct: 64 VENLKLAIEECIRPDTLKAT-ETVLNVIDAFDIPKIKYDLNKKKFILSTVAPDLYAEAQY 122
Query: 129 KAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQ 188
K+ ++++RF LL+ R R + F+ P +G+ W+ V
Sbjct: 123 KSEIFKNRFELLWYRTLRHELFNPPR-------------------LGEKKDDWIELV--- 160
Query: 189 LEDGHFYLEDLAASVEIDLSKAKITT----GFFTENTIVVAEGEMLVDGIFQVITCGFPP 244
+E LS++K G E ++V+A G+ DG+ V GFPP
Sbjct: 161 -------------PIEHLLSESKTGNNFQDGLIMEASVVIANGDYR-DGVLYVEELGFPP 206
Query: 245 LEDRDQSLKLLAGYDFFGGG-TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
E + + FGG L + + +L E+ + M + +S++WLD+ V+ K
Sbjct: 207 AESSYNARVDFGDANTFGGPHNLSLKFSEKLKHYEESNKDGMIIFVSEVWLDDITVLQKF 266
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363
+L G+ E P FV G+F S P N++ S L+ L MI +P +KE S+
Sbjct: 267 RTMLAGY--AECPPIAFVLCGHFLSFPANIT--SAHKLKEGLKDLRDMIMQYPSIKESSK 322
Query: 364 FLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
F+F+P DD G +LPR LPKY+TE +K IP AIF++NPCR+ +
Sbjct: 323 FIFVPASDDVGSPKILPRSPLPKYITENFRKNIPGAIFTTNPCRIQY 369
>gi|213406189|ref|XP_002173866.1| DNA polymerase epsilon subunit B [Schizosaccharomyces japonicus
yFS275]
gi|212001913|gb|EEB07573.1| DNA polymerase epsilon subunit B [Schizosaccharomyces japonicus
yFS275]
Length = 604
Score = 157 bits (398), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 102/332 (30%), Positives = 178/332 (53%), Gaps = 19/332 (5%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
S +VIDAF +P + Y S ++ F + L + +A + +Y+ R ++ R+S++ F
Sbjct: 143 SQFKVIDAFKMPYYEYQSSRRFFERSTKKLSLLPQAESFTNMYQRRLQVIQHRISQNDAF 202
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK 209
SF S G I+ I+SL+G+ G +++ G ++ DG +LEDL + VE+D+S+
Sbjct: 203 QSTSFHRTFSNGGQTSITPIRSLLGRAGSDFLLFGQLNLRPDGKPWLEDLDSQVELDVSQ 262
Query: 210 AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKE 269
G+F +V+ G+ L +G F V PP+E RD +L+ A D G
Sbjct: 263 CAWGMGWFFPGCLVLVNGQFLENGKFLVFEVCHPPIEKRDATLRHQANLDTLGLNL---- 318
Query: 270 DTLRLADL---EKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFE-SVEVVPSLFVFMGN 325
DT +LA + E+ N FVI +D+ LD+ + LE +L +E +++ +P F+F G+
Sbjct: 319 DTNQLAYIRRAEREFQNAYFVICADLHLDDRQTFIALEKMLGMYENNIDELPVTFIFCGS 378
Query: 326 FCSHPCNLSFHSF-SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS---TVL 379
F S +FH+ +SL+ + F + ++ P + + + +FIPGP+D ++L
Sbjct: 379 FYS----TAFHNTGTSLQYKEHFNEFATLLEKFPGICKDCQLVFIPGPNDPWTCNGISML 434
Query: 380 PRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
P+ +P Y +++ NAIF+SNP R++F
Sbjct: 435 PQQPIPPYFVNRIRRVSKNAIFTSNPSRISFF 466
>gi|406700722|gb|EKD03887.1| epsilon DNA polymerase [Trichosporon asahii var. asahii CBS 8904]
Length = 579
Score = 157 bits (397), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/334 (29%), Positives = 163/334 (48%), Gaps = 22/334 (6%)
Query: 81 EGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLL 140
E D + + V+D+F +P R+D ++ F I G+A+++++ R+R+ ++
Sbjct: 66 EADPSEVNVEAHFSVVDSFNMPPVRFDPVRAAFSVAKRKPSIAGQAASRSSYLRERWGII 125
Query: 141 FQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLA 200
+ + R+++F+ P+ G + ++ + + G++S+ +G LED
Sbjct: 126 REIILRNENFTPPALG------GQDRDNYLKLFL-------LFGMLSRNPEGRLTLEDGD 172
Query: 201 ASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
V +D+ A G FTE +V+ EGE VD +V+ G PP E R + L DF
Sbjct: 173 GRVVLDMEDAVPGEGLFTEGCMVLIEGEYTVDDTLRVLAMGHPPSEKRHIARGLHGHVDF 232
Query: 261 FGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-ESVEVVPSL 319
GGG + ++ + FV+LSD+WLD+ + L + +G+ E+ E P +
Sbjct: 233 LGGGAMSVKEEKKYQPTVIANTQVSFVVLSDVWLDHPSTLVALRRLFEGYAEAAEYRPMV 292
Query: 320 FVFMGNFCSHPCNLSFHSFSSLRLQ---FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS 376
FV GNF + L+ F L +I + P L + S F+F+PGP D
Sbjct: 293 FVLCGNFVQR----GWEGEGGLKQYTNGFNALTDLILSFPLLLQ-SHFVFVPGPLDPWTG 347
Query: 377 TVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
T LPR ALPK T+ L IP A F SNPCRL +
Sbjct: 348 TTLPRPALPKNFTQRLASRIPKAKFVSNPCRLRY 381
>gi|409049733|gb|EKM59210.1| hypothetical protein PHACADRAFT_181204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 538
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/420 (26%), Positives = 201/420 (47%), Gaps = 17/420 (4%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDE---AIDLLLDQF--EHESS 55
M+ ++ I K + + L +AL+ + + R ED+ +++ + ++ + ++
Sbjct: 1 MADPKQRAIIKVFRKYSHSLGPEALEFVEEILERHEIPEDQVEQSVEWIAKEYNKQDDAQ 60
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
+K S+ E + RV + A+GD +H + IDAF +P + + + + F +
Sbjct: 61 MKVSL---EVLQRVYDTFQEGSDMADGDFLDPESH--LYFIDAFEMPLWNWSTERSAFER 115
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
L G A + + R+R ++ Q + R+ HFS PS + + + L+G
Sbjct: 116 ALAPLTGSGSADTRISAIRNRLNIIKQTILRNDHFS-PSTIAARDREHLLTLRSTKQLLG 174
Query: 176 QTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGEMLVDG 233
+ G+R+++ G++S ++G LED +VE+D S+ + + G FTE + EG+ +
Sbjct: 175 RAGQRFLLFGMLSHSKEGKICLEDEDGAVELDFSQLDQPSEGLFTEGCFALVEGDYTDEA 234
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDMFVILSDI 292
Q+I G PP E R+ + + DF G G T ED L + + +LSD+
Sbjct: 235 TLQIIAIGHPPCESREAAKSIYGHIDFLGKGATTLAEDNQLATRLREDWPDLRCFVLSDV 294
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQ 350
WLD+ + M L+ + D + +P L V GNF S +S R Q F L +
Sbjct: 295 WLDHPDTMQGLKKLFDNCVENQFIPRLIVLCGNF-SQRGVAQGNSREIRRYQDGFDSLAE 353
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+IA++P + F+ +PGP D +++LPR + T +L+ +P SNPCR+
Sbjct: 354 LIASYPVFTRQTHFILVPGPRDITVNSILPRKPIISSFTGKLKSKVPKLHLGSNPCRIKL 413
>gi|449549810|gb|EMD40775.1| hypothetical protein CERSUDRAFT_45107 [Ceriporiopsis subvermispora
B]
Length = 541
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/417 (26%), Positives = 193/417 (46%), Gaps = 9/417 (2%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M+ ++ I K + + L +AL+ + S ++ + DE ++ ++ E + +
Sbjct: 1 MADARQRTIIKVFRKYSHSLGPEALEFLESLLDAH-EVSDEDVEYSVEWIAKEYNRQDDA 59
Query: 61 ---IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
+ E + RV + + D S + +DAF +P + + + + F + A
Sbjct: 60 QMKVSLEILKRVYETFQGSRDSHAADQDMLDPESHLHFVDAFDMPLWHWSTERSSFEKAA 119
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQT 177
G L + A ++ R+R ++ Q V R+ HFS + + E ST Q L+G+
Sbjct: 120 GPLTVSSSADSRILAMRNRLDVIRQAVLRNDHFSPSTIPSRDREHLLTLRSTKQ-LLGRP 178
Query: 178 GRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGEMLVDGIF 235
G R+++ G+++ ++G LED SVE+D S+ + + G FTE + + EGE D
Sbjct: 179 GERFLLLGMLTYSKEGKLCLEDQDGSVELDFSQLDQPSEGLFTEGCVAMVEGEYTEDTTL 238
Query: 236 QVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
VI G PP E R+ + + DF G G T EDT L + F +LSD+WL
Sbjct: 239 IVIAIGHPPCESRETARSIYGHVDFLGRGSTTLLEDTQLATRLRLELPDLSFFVLSDVWL 298
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQFGKLGQMIA 353
D E L+++ +P + + GNF S + S + F L I
Sbjct: 299 DRPETFSGLQLMFQHCIDNHFIPKVIILCGNFSSKGISKNSAREVKRYQENFDVLADCIV 358
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+P + ++ F+F+PG D ++VLPR L L L+ +P F++NPCR+ F
Sbjct: 359 QYPLITRYTHFVFVPGSLDITVNSVLPRRPLLSSLVSRLKSRVPKVHFATNPCRIKF 415
>gi|336373529|gb|EGO01867.1| hypothetical protein SERLA73DRAFT_177419 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386348|gb|EGO27494.1| hypothetical protein SERLADRAFT_460996 [Serpula lacrymans var.
lacrymans S7.9]
Length = 516
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/421 (27%), Positives = 201/421 (47%), Gaps = 16/421 (3%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHE------S 54
M+ ++ I K + + L +ALD L + + +D+ I++ ++ E +
Sbjct: 1 MADARQRIIIKVFRKYSHSLGPEALD-FLEHILTEHEIDDDDIEMSVETIAKEYNKQDDA 59
Query: 55 SLKSSIIDKESVNRVTSVLL-QAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
S+K S+ + + RV L Q E ++ S + IDAF +P + + + F
Sbjct: 60 SMKVSL---KVLRRVYETLQDQGSNPGEPEAELLDPESHLYFIDAFEMPLWHWSVERGTF 116
Query: 114 YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSL 173
+ L I G A ++ R+R ++ Q + R++HF+ + + E ST Q L
Sbjct: 117 EKAQNLLTISGSADSRVLAMRNRLHIIKQSILRNEHFAPSTLPSRDREHLVTLKSTKQ-L 175
Query: 174 VGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLV 231
+G+ G R+++ G++++ +G +ED S E+DLS+ + G +TE + EGE
Sbjct: 176 LGRPGERFLLLGMLARNMEGKLCVEDSDGSAELDLSRLEEPGEGLYTEGCFALVEGEYTE 235
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDMFVILS 290
DG +V+ G PP EDRD + + DF G G T ED+ + ++ F LS
Sbjct: 236 DGTLEVVAMGQPPCEDRDTTRSIYGHIDFLGKGSTTLLEDSQYSRRIRGELSDLYFFFLS 295
Query: 291 DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQFGKLG 349
D+WLD+ + L+ +LD +P + V GNF S + S + F L
Sbjct: 296 DVWLDHPKTFTGLQKMLDNCVENSFIPKVIVLCGNFTSRSISQGSARDIQRYQENFDALA 355
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
++A++ ++ + F+F+PGP D + LPR L ++ +P A F+SNPCRL
Sbjct: 356 DLLASYSQITRTTHFVFVPGPLDIINNGALPRRPLLSSFVSRIKAKVPKAHFASNPCRLK 415
Query: 410 F 410
F
Sbjct: 416 F 416
>gi|393215638|gb|EJD01129.1| epsilon DNA polymerase [Fomitiporia mediterranea MF3/22]
Length = 535
Score = 154 bits (389), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 99/321 (30%), Positives = 158/321 (49%), Gaps = 11/321 (3%)
Query: 96 IDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF 155
IDA+ +P + + + F + S I G A ++ RDR ++ Q + R+ HFS PS
Sbjct: 101 IDAYEMPLWHWSQTRATFEKAPHSPTISGTADSRITAIRDRHDIIKQTILRNDHFS-PST 159
Query: 156 DVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITT 214
+ + + L+G+ G R+++ G++ ++G LED VE+D S+ I +
Sbjct: 160 LPGKDRDRLLNLRSTKQLLGRAGERFLLFGLLGYSKEGKLCLEDTEGKVELDFSQLDIPS 219
Query: 215 -GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLR 273
GFFTE + EG+ + VI G PP E R+ S + DF G G+ L
Sbjct: 220 EGFFTEGCFALVEGDYTEEETLTVIAIGHPPCERREVSRSIFGHVDFLGKGS---STPLE 276
Query: 274 LADLEKRAA----NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH 329
++E+R + N MF LSD+WLD+ E L + D E +P +F+ GNF S
Sbjct: 277 DMEIEQRVSREFENLMFHCLSDVWLDHPETFVGLASIFDRCIEAEAIPLVFILCGNFTSR 336
Query: 330 P-CNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYL 388
+ S + F +L +IA++P + ++ F+F+PGP D ++VLPR L
Sbjct: 337 GIAQGNGREIQSYQENFDRLADLIASYPIIARNTHFVFVPGPLDITANSVLPRRPLLSSF 396
Query: 389 TEELQKYIPNAIFSSNPCRLN 409
+L + A F SNPCR+
Sbjct: 397 VGKLNSKLAKAHFLSNPCRIK 417
>gi|395328796|gb|EJF61186.1| epsilon DNA polymerase [Dichomitus squalens LYAD-421 SS1]
Length = 542
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 194/418 (46%), Gaps = 19/418 (4%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
R I K + G+ L ++L+ + ++R D DE ++ ++ E + + K S
Sbjct: 5 RHVIIKVFRKYGHSLGPESLEFLEDLLDRH-DIADEEVEYSIEWMAQEYNKQDDAQMKVS 63
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIR------VIDAFLVPKFRYDSIKKHFYQHAGS 119
++ + V E GD+ HS + IDA+ +P + + + F + G+
Sbjct: 64 LDVLQRVY---ETFQNGDNNEDEGHSQLDSDSHLFFIDAYEMPLWNWSVERSTFERAQGT 120
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGR 179
L G A ++ R+R ++ Q V R+ HFS PS + + + L+G+ G
Sbjct: 121 LTASGSADSRVFAARNRLNVIKQCVLRNDHFS-PSTLPSKDRQNLLTLKSTKQLLGRAGD 179
Query: 180 RWVM-GVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQV 237
R+++ G+++ ++G LED +VE+D S+ + + G FTE + EG+ D V
Sbjct: 180 RFLLFGMLTHSKEGKLCLEDQDGAVELDFSQLEQPSEGLFTEGCFALVEGDYTEDATLLV 239
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
I G PP E R+ + + DF G G T ED + ++ + F +LSD+WLD
Sbjct: 240 IAIGHPPCESREAARSIYGHIDFLGRGATTLLEDKQFASRVQLELPDLRFFVLSDVWLDK 299
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRL---QFGKLGQMIA 353
+ + L + D +P + V GNF S + + LR F L +I
Sbjct: 300 PDTLLGLRKMFDNCMENSFIPKVIVLCGNFTS--VGIPQGNGRELRKYQDNFEALADLIT 357
Query: 354 AHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
++P L + F+ +PGP D ++VLPR + L+ +PN F+SNPCR+ F
Sbjct: 358 SYPLLTRTTHFVLVPGPLDVTINSVLPRRPILSSFVSRLKSRVPNVHFASNPCRIKFF 415
>gi|357605568|gb|EHJ64679.1| DNA-directed DNA polymerase epsilon 2 [Danaus plexippus]
Length = 373
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 83/247 (33%), Positives = 138/247 (55%), Gaps = 9/247 (3%)
Query: 167 ISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAE 226
I +QS + V+G+I+QL +G +YLED SV +D+S+ + +G FTE++ V+AE
Sbjct: 12 IEVLQSSSSRVDEVIVLGLITQLTEGKYYLEDPTGSVPLDMSQTRYHSGLFTESSFVLAE 71
Query: 227 GEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG--GTLKKEDTLRLADLEKRAAND 284
G D + V+ PP E R+ SL + FGG TL K L+ +E+ +
Sbjct: 72 G-YYDDKVLHVMGLVLPPSETRETSLPYFGNLNTFGGISKTLLKHSK-NLSKIEQENEDG 129
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
M + LS++W DN +V+ KL+ + G+ + P VFMG F S C + + L+
Sbjct: 130 MIIFLSEVWFDNIKVISKLKTLFSGYN--DFPPIAIVFMGEFLS--CPYGYEHSTQLKAA 185
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNA-IFSS 403
G L MI +L+E +F+F+PG D +LPR A+P ++T++++ + ++ IF++
Sbjct: 186 LGNLCDMILPFKKLRESCKFIFVPGRGDPAAPNILPRPAIPSFITQDIKSKLGDSVIFTT 245
Query: 404 NPCRLNF 410
NPCR+ +
Sbjct: 246 NPCRIQY 252
>gi|195376835|ref|XP_002047198.1| GJ13306 [Drosophila virilis]
gi|194154356|gb|EDW69540.1| GJ13306 [Drosophila virilis]
Length = 526
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 109/414 (26%), Positives = 191/414 (46%), Gaps = 22/414 (5%)
Query: 3 GQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
Q RK+I K+ G+ +R + + + F AE E ++ + L + ++
Sbjct: 5 AQLRKRITTSFKLCGFLIRSENSTYLAEQLLPFEPAEREKWMTVITENLQGQKLSTPHVE 64
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPI 122
+E++ + + L + G + +IDAF VP++RY++ K F +
Sbjct: 65 REALEKAINELNRV--------GLDEGETIFSLIDAFTVPRYRYNTRIKKFELDTQPRRL 116
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFD---VVNSEFGSCEISTIQSLVGQTGR 179
+ K+ + R+ +L Q+ R F+ ++ ++ ++L+ +
Sbjct: 117 LTQPRMKSDYLQQRYAMLLQKTLRHDLFAPAVIQDGVAAAAQSKKFKLQYAENLLATSHL 176
Query: 180 R--WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV 237
+ V+G+++QL++G F++ED VE+DLS A+ GFF E V+AEG +G+ +V
Sbjct: 177 KEAVVLGLLTQLKEGKFFVEDPTGCVELDLSGARFHAGFFCEGCFVLAEGSY-ANGVLKV 235
Query: 238 ITCGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDN 296
GFPP E S + +GG + K + + RL ++E+ V LSD+ LD
Sbjct: 236 DGLGFPPAEQATSSRAFFGTGNTWGGESTKLLKYSPRLQEVERTNTETTLVFLSDVRLDL 295
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
VM KL + G++S P V MG F + S + LR LG + A
Sbjct: 296 PVVMDKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRQHLDALGALAAGCE 348
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+LK+ + + +P +D +LPR LP+ L L K P ++NPCRL +
Sbjct: 349 QLKKQTDLILVPSAEDPTAPNILPRAPLPECLAAGLLKAWPRTQLATNPCRLQY 402
>gi|343429581|emb|CBQ73154.1| related to DNA polymerase epsilon subunit B [Sporisorium reilianum
SRZ2]
Length = 633
Score = 151 bits (382), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 102/358 (28%), Positives = 171/358 (47%), Gaps = 40/358 (11%)
Query: 90 HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
H V AF PK +D I+K F S + A+ ++ R R+ +L +SR+++
Sbjct: 146 HRYFGVHSAFTQPKLAFDPIRKVFEPATLSPTVLPTAATRSTFPRQRYHILKSVISRNEN 205
Query: 150 FSRPSFDVVNSEFGS-----------CEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLE 197
F P + + GS ++++ ++L+G+ G+R+++ G++S DG + LE
Sbjct: 206 FCPPL--AIGTASGSRSGKNELADGFMKLTSTKNLLGRQGQRFLLFGMLSTSSDGRYELE 263
Query: 198 DLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAG 257
D +V +DL+ A G FTE ++++ EGE V+ +V G PP E R Q+ + A
Sbjct: 264 DADGTVGLDLADAIPGEGIFTEGSLILVEGEYTVEERMRVFAIGHPPSETRAQARSIHAH 323
Query: 258 YDFFGG---------------------GTLKKEDTLRLADLEKRAANDMFVILSDIWLDN 296
DF G G + ++ A E R ++ FVI SD+ LD+
Sbjct: 324 TDFLGAPQPPALSSASARAAAASSSWRGAMSVKEEAAFAVHEARLSDLCFVIFSDLHLDH 383
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356
+ + VL G+ + +P V GNF S S + R F LG+ +AA P
Sbjct: 384 AKTLSAFATVLQGYVDADFLPFALVLCGNFASEQYT-SADTVQRYRAGFAMLGETLAAFP 442
Query: 357 RLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIP----NAIFSSNPCRLNF 410
+ S + +PGP DA ++++PR ALP+ L + L + + +SNPCRL++
Sbjct: 443 SIVRSSHVILVPGPQDAFATSLVPRPALPEVLVQPLLQKLKALQGTVHLASNPCRLSY 500
>gi|389745512|gb|EIM86693.1| DNA polymerase epsilon subunit B [Stereum hirsutum FP-91666 SS1]
Length = 558
Score = 150 bits (380), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/384 (27%), Positives = 180/384 (46%), Gaps = 12/384 (3%)
Query: 36 PDAEDEA-IDLLLDQF--EHESSLKSSIIDKESVNRVTSVLLQA-EAAAEGDSGSASNHS 91
PD EA ID++ Q+ + ++ K SI + + RV S L + E + D
Sbjct: 38 PDEYVEASIDVIAKQYNLQEDAGTKVSI---DILKRVYSALQNSGEGGPQDDEAYLDPDD 94
Query: 92 AIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFS 151
+ ++AF +P + + + F + + L A ++ R+R ++ Q +SR++HF+
Sbjct: 95 YLFFVNAFDMPLWNWSDERGTFDKSSQPLSTFSSAESRVMATRNRLNIIRQTISRNEHFT 154
Query: 152 RPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA 210
PS + + + L+G+ G+R+++ G++S ++G LED VE+D S+
Sbjct: 155 -PSTVPSRDRQHLITVKSTKQLLGRAGQRFLLFGMLSHTKEGKLCLEDQDGIVELDFSQM 213
Query: 211 -KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKK 268
+ + G FTE + EG+ D F V G PP E R+ S + DF G G T
Sbjct: 214 DEPSDGLFTEGAFALVEGDYTEDSTFLVYGMGHPPSETRETSRSIYGHVDFLGKGATTPL 273
Query: 269 EDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCS 328
ED + + F LSD+WLD+ + M L + D +P + V GNF S
Sbjct: 274 EDAQYAMRIREDFGAINFFFLSDVWLDHPDCMKGLSRIFDNCIESNFIPKVMVLCGNFTS 333
Query: 329 HP-CNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKY 387
+ + F L +I+++P + + + F+ +PGP D +++LPR L
Sbjct: 334 RGIAQGNSRDIQKYQTGFDALADLISSYPLITQTTHFVLVPGPLDLAMNSILPRRPLLSS 393
Query: 388 LTEELQKYIPNAIFSSNPCRLNFL 411
T L+ IP +SNPCR+ F
Sbjct: 394 FTARLRAKIPRLQLASNPCRIKFF 417
>gi|328698886|ref|XP_001952286.2| PREDICTED: DNA polymerase epsilon subunit 2-like [Acyrthosiphon
pisum]
Length = 593
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 115/435 (26%), Positives = 212/435 (48%), Gaps = 44/435 (10%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAED--EAIDLLLDQFEHESSLKSS 59
+ + RK I + G+ ++ A ++ + ED + +D ++D S+ +
Sbjct: 4 TTKLRKFIVSTFSLNGFTIQERACAYLVQQLEPLESREDRDKWLDKIVDYVRVSSTNDGN 63
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS 119
I+ E +++ + + D + V A+ +P++RY K F +
Sbjct: 64 IVTYELLSKALKFCCNLQILNDED--------ILHVTPAYKLPRYRYCPTTKKFQRIKSE 115
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSR-----DQHFSRP--------SFDVVNSEFGSCE 166
+ + G+A +K A Y DR+ ++ QR++R D ++P D + S G+C
Sbjct: 116 ISMFGDAQSKIAQYVDRYTVIRQRMARIKTTSDGTLNQPLTIGDKIRDVDYLLSS-GACR 174
Query: 167 ISTIQSLVGQTGRRWVMGVISQL-EDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVA 225
S ++ ++GV+ QL E G YLED ++ +D++ G+FTEN V+A
Sbjct: 175 KFDHSS---KSNSILLLGVLVQLKEGGRHYLEDPTGAIPLDITATDFQKGYFTENCCVLA 231
Query: 226 EGEMLVDG-IFQVITCGFPPLEDRDQSLKLLAG--YDFFGGGTLK-KEDTLRLADLEKRA 281
EG D +F V PP E R + K+ G +F L K +L + EK +
Sbjct: 232 EGRYCSDRRVFFVTNMALPPCE-RTEISKIYFGESSNFSDSNDLNLKSCNPKLLEYEK-S 289
Query: 282 ANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSS- 340
N M V +SD++LD+ +V+ K +L+ F ++ P V MG++ S C + H+++
Sbjct: 290 KNRMIVFVSDVFLDDPKVLRKFHTLLNSFN--DLAPVAIVMMGDYLS--CRIPSHAYAQE 345
Query: 341 LRLQFGKLGQMIAAH-PRLKEHSRFLFIPGPDD----AGPSTVLPRCALPKYLTEELQKY 395
L+ +LG + + P L +H+ F+ + GP D A +++LPR +P++LTEE ++
Sbjct: 346 LKTHLNQLGHFLHDNTPVLCKHTMFVLLSGPGDRYSGAAGASILPRPLIPEFLTEEFRRL 405
Query: 396 IPNAIFSSNPCRLNF 410
+P +F++NPCR+ +
Sbjct: 406 VPRCVFTTNPCRMQY 420
>gi|299747780|ref|XP_001837253.2| epsilon DNA polymerase [Coprinopsis cinerea okayama7#130]
gi|298407675|gb|EAU84870.2| epsilon DNA polymerase [Coprinopsis cinerea okayama7#130]
Length = 546
Score = 149 bits (375), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 194/394 (49%), Gaps = 24/394 (6%)
Query: 36 PDAEDE-AIDLLLDQF--EHESSLKSSIIDKESVNRVTSVLLQ--AEAAAEGDSGSASNH 90
PD + E +IDL+ ++ E ++++K S+ + + RV L + E + NH
Sbjct: 37 PDEDVETSIDLIAKEYNKEDDATMKVSL---DVLQRVYESLQDRGEDNQVEHEFIDPDNH 93
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFY---------QHAGSLPIHGEASAKAALYRDRFLLLF 141
+ VIDA+ +P++ + + HF+ + + SL G ++ A RDR ++
Sbjct: 94 --LFVIDAYDMPRWVWSQERVHFHVDSQWILLLRISTSLSSAGTPESRIASMRDRLHIIK 151
Query: 142 QRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLA 200
Q V R++HF+ PS + + + + L+G+ G R+++ G+++ ++G LED
Sbjct: 152 QCVLRNEHFA-PSTLPAHDRERLVTLRSTKQLLGRAGERFLLLGLLAHNKEGKVCLEDSD 210
Query: 201 ASVEIDLSKA-KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYD 259
VE+D S+ + GFFT+ + EGE +G ++I G PP E R+ S + D
Sbjct: 211 GRVELDFSRLDEPGDGFFTDGCFALVEGEYTEEGTLEIIAIGQPPCEPRETSRSIYGHID 270
Query: 260 FFG-GGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPS 318
F G G T ED +++ A+ F SD+WLD+ + + L+ + D + VP
Sbjct: 271 FLGKGATSLLEDRQYALRVKQELADLHFFFFSDVWLDHPQTLPGLQKIFDNCIENDFVPK 330
Query: 319 LFVFMGNFCSHP-CNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST 377
L V GNF S + + + F LG +I+++ + + +F+PGP D ++
Sbjct: 331 LIVMCGNFTSKTIAHGNARDIQRYQDNFDALGDLISSYHNIAHSTHIVFVPGPLDITVNS 390
Query: 378 VLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
VLP+ + L+ P A F++NPCR+ F
Sbjct: 391 VLPKRPILAAFVNRLKSKFPKAHFATNPCRIKFF 424
>gi|170091000|ref|XP_001876722.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648215|gb|EDR12458.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 530
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 101/365 (27%), Positives = 177/365 (48%), Gaps = 10/365 (2%)
Query: 51 EHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIK 110
+ ++ +K S+ E + RV E +S NH + VI+AF +P++ + +
Sbjct: 56 QDDAEMKVSV---EVLRRVYDSFQDENEHVEKESIDPENH--LFVINAFEMPRWTWSQER 110
Query: 111 KHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTI 170
F + L G A ++ A RDR ++ Q V R++HF+ + + E ST
Sbjct: 111 GTFERSGAPLTSSGSAESRIASIRDRLNIIKQCVLRNEHFAPSTLPSRDRERLVTLRSTK 170
Query: 171 QSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGE 228
Q L+G+ G R+++ G+++ ++G +ED SVE+D SK + G FT+ + EGE
Sbjct: 171 Q-LLGRPGERFLLLGMLAHNKEGKLCIEDADGSVELDFSKLDEPGDGLFTDGCFALVEGE 229
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLKKEDTLRLADLEKRAANDMFV 287
+ ++I G PP E R+ + + DF G G T ED+ + + + F
Sbjct: 230 YTQEATLEIIAIGQPPCEPREIARSIYGHIDFLGKGSTSLLEDSQFATRIREELSELHFF 289
Query: 288 ILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQFG 346
LSD+WLD+ + + L + D + +P++ V GNF S + + + F
Sbjct: 290 FLSDVWLDHPQTLPGLRKMFDNCTENDFIPAVIVMCGNFTSKSISHGNGREVQRYQDNFD 349
Query: 347 KLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPC 406
+L +IA++P + + F+ +PGP D ++ LPR L L L+ + F++NPC
Sbjct: 350 ELADLIASYPLITRKTHFILVPGPLDITVNSTLPRRPLLAALVARLEAKVHKIHFATNPC 409
Query: 407 RLNFL 411
R+ F
Sbjct: 410 RIKFF 414
>gi|194750160|ref|XP_001957498.1| GF10439 [Drosophila ananassae]
gi|190624780|gb|EDV40304.1| GF10439 [Drosophila ananassae]
Length = 525
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 194/412 (47%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNNFKLCGFLIRSENSTYLAEQLLPFDAAERDKWLTVITENLQGQKLATPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP++RY++ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRYRYNNRVKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSAMKE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DLS A+ GFF E V+AEG+ +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLSGARFHAGFFCEGCFVLAEGKY-SNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E S + +GG + K + + RL +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPATSSRAFFGTANTWGGESAKLLKYSPRLQELERTNTETTIVFLSDVRLDLPV 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 299 VMDKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|195127219|ref|XP_002008066.1| GI12037 [Drosophila mojavensis]
gi|193919675|gb|EDW18542.1| GI12037 [Drosophila mojavensis]
Length = 526
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 188/411 (45%), Gaps = 22/411 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F E E ++ + L + +++E+
Sbjct: 8 RKRITTSFKLCGFLIRSENSSFLAEQLLPFEPTEREKWLTIITENLQGQKLATPHVEREA 67
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP++RY++ K F + + +
Sbjct: 68 LEKAINELNRV--------GLDEGETIFSLIDAFTVPRYRYNTRIKKFELDSRPRCLLPQ 119
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSFD---VVNSEFGSCEISTIQSLVGQTGRR-- 180
K+ + R+ +L Q+ R F+ +++ ++ ++L+ + +
Sbjct: 120 PRMKSDYMQQRYAMLLQKTLRHDLFAPAVIQDGVAADAQTKKFKLQYAENLLATSSLKEA 179
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+++QL++G FY+ED V++DLS A+ GFF E V+AEG +G+ +V
Sbjct: 180 VVLGLLTQLKEGKFYVEDPTGCVQLDLSGARFHAGFFCEGCFVLAEGSY-ANGVLKVDGL 238
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
GFPP E S + +GG K + + RL +LE+ V LSD+ LD V
Sbjct: 239 GFPPAEPATSSRAFFGTGNSWGGEAAKLLKYSPRLQELERTNTETTIVFLSDVRLDLPIV 298
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
M KL + G++S P V MG F + + LR LG + A LK
Sbjct: 299 MEKLRQLFVGYDSCP--PQAIVLMGPFTA-----GTRNHHELRQHLDALGALAAGCEHLK 351
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ + + +P +D +LPR LP+ L L K P ++NPCRL +
Sbjct: 352 KQTDLILVPSVEDPTAPNILPRAPLPECLAAGLLKAWPRTQLATNPCRLQY 402
>gi|302693741|ref|XP_003036549.1| hypothetical protein SCHCODRAFT_47682 [Schizophyllum commune H4-8]
gi|300110246|gb|EFJ01647.1| hypothetical protein SCHCODRAFT_47682, partial [Schizophyllum
commune H4-8]
Length = 482
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 97/326 (29%), Positives = 163/326 (50%), Gaps = 8/326 (2%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
S + V+D+F +P + + + F + L + G ++ R+R ++ Q V R++HF
Sbjct: 43 SHLFVVDSFEMPLWNWSPERGTFEKVNTPLTVSGTPESRVLSVRNRLNIIKQCVLRNEHF 102
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK 209
+ PS + S+ + + + L+G+ G R+++ G+++ ++G LED SVE+D +
Sbjct: 103 A-PS--TLPSKDRERLLKSTKQLLGRAGERFLLLGMLAHNKEGKLVLEDADGSVELDFTH 159
Query: 210 A-KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-GGTLK 267
+ G F E + EGE DG +VI G PP E RD + + DF G G T
Sbjct: 160 LDEPGDGLFVEGCFALVEGEYTPDGALEVIAIGQPPCEPRDVARSIYGHIDFLGKGATSL 219
Query: 268 KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
EDT +++ N F +LSD+WLD+ + L ++ + + + VP + V GNF
Sbjct: 220 LEDTQFATRVQEDFENMQFFVLSDVWLDHPRTLPGLRLMFENCVANDFVPKVIVLCGNFT 279
Query: 328 SHPCNLS-FHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGP-DDAGPSTVLPRCALP 385
+ + + F L +IA+ P L + F+F+PGP D A VLPR L
Sbjct: 280 TQSISHGDGRDIQRYQENFDALADLIASFPDLTAATHFVFVPGPLDIALNGPVLPRKPLM 339
Query: 386 KYLTEELQKYIPNAIFSSNPCRLNFL 411
T L+ +P+ F++NPCR+ F
Sbjct: 340 SAFTARLRAKVPHVHFATNPCRIKFF 365
>gi|125977344|ref|XP_001352705.1| GA10347 [Drosophila pseudoobscura pseudoobscura]
gi|54641454|gb|EAL30204.1| GA10347 [Drosophila pseudoobscura pseudoobscura]
Length = 525
Score = 147 bits (371), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 108/415 (26%), Positives = 195/415 (46%), Gaps = 30/415 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDA----LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
RK+I K+ G+ +R + +++L F D D+ + ++ + + + L + +
Sbjct: 9 RKRITNNFKLCGFLIRSENSTYLAEQLLPFDA---DERDKWLTVITENLQGQK-LATPHV 64
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
++ ++ + + L + G + +IDAF VP++RY++ K F
Sbjct: 65 ERAALEKAINELNRV--------GLDEGETVFALIDAFTVPRYRYNTRIKKFEPDLTPRQ 116
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFD---VVNSEFGSCEISTIQSLVGQTG 178
+ K+ + R+ +L Q+ R F+ N++ ++ ++L+ +
Sbjct: 117 LLSAPRMKSDYMQQRYAMLLQKTLRHDLFAPAVIQDGVGANAQAKKFKLQFAENLLATST 176
Query: 179 RR--WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQ 236
R V+G+++QL++G FY+ED S+++DLS A+ GFF E V+AEG +G+ +
Sbjct: 177 IREAVVLGLLTQLKEGKFYVEDPTGSIQLDLSGARFHAGFFCEGCFVLAEGNY-SNGVLK 235
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLD 295
V GFPP E S + +GG + K + + RL +LE+ V LSD+ LD
Sbjct: 236 VDGLGFPPAEPATSSRAFFGTANTWGGESTKLLKYSPRLQELERTNTETTIVFLSDVRLD 295
Query: 296 NEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355
V+ KL + G++S P V MG F + S + LR LG + A
Sbjct: 296 LPVVVEKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRQHLDALGGLAAGC 348
Query: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+LK+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 349 EQLKKQTDLILVPSTEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|195174444|ref|XP_002027984.1| GL21402 [Drosophila persimilis]
gi|194115694|gb|EDW37737.1| GL21402 [Drosophila persimilis]
Length = 525
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 198/418 (47%), Gaps = 36/418 (8%)
Query: 6 RKKIQKKMKIRGYGLRMDA----LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSII 61
RK+I K+ G+ +R + +++L F D D+ + ++ + + + L + +
Sbjct: 9 RKRITNNFKLCGFLIRSENSTYLAEQLLPFDA---DERDKWLTVITENLQGQK-LATPHV 64
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
++ ++ + + L + G + +IDAF VP++RY++ K F
Sbjct: 65 ERPALEKAINELNRV--------GLDEGETVFALIDAFTVPRYRYNTRIKKFEPDLTPRQ 116
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSC------EISTIQSLVG 175
+ K+ + R+ +L Q+ R F+ P+ V+ G+ ++ ++L+
Sbjct: 117 LLSAPRMKSDYMQQRYAMLLQKTLRHDLFA-PA--VIQDGVGATAQAKKFKLQFAENLLA 173
Query: 176 QTGRR--WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
+ R V+G+++QL++G FY+ED S+++DLS A+ GFF E V+AEG +G
Sbjct: 174 TSTVREAVVLGLLTQLKEGKFYVEDPTGSIQLDLSGARFHAGFFCEGCFVLAEGNY-SNG 232
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDI 292
+ +V GFPP E S + +GG + K + + RL +LE+ V LSD+
Sbjct: 233 VLKVDGLGFPPAEPATSSRAFFGTANTWGGESTKLLKYSPRLQELERTNTETTIVFLSDV 292
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
LD V+ KL + G++S P V MG F + S + LR LG +
Sbjct: 293 RLDLPVVVEKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRQHLDALGGLA 345
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
A +LK+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 346 AGCEQLKKQTDLILVPSTEDPSAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|350412390|ref|XP_003489629.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Bombus impatiens]
Length = 492
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 97/325 (29%), Positives = 155/325 (47%), Gaps = 45/325 (13%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
+ + VID F +P+ +Y+ + F + + EA K+ L++DRF LL+ R R + F
Sbjct: 85 TVLNVIDVFDIPRIKYELFENKFVLETVTPNLVAEAQYKSILFKDRFELLWYRTMRHELF 144
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA 210
+ P + G+ + W+ V +E LS +
Sbjct: 145 TPP-------------------MPGERKKDWIELV----------------PIEHLLSGS 169
Query: 211 KITTGF----FTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GT 265
K GF E +IV+A G+ DGI V GFPP E + + FGG
Sbjct: 170 KEGNGFQDGLIMECSIVIANGD-FKDGILHVKNLGFPPAESSSNARVDFGNANTFGGLSK 228
Query: 266 LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGN 325
+ + +L E+ + M V +S++WLD++ V+ K +++L+G+ E P FV G+
Sbjct: 229 FSLKLSEKLKTYEESNKDGMIVFVSEMWLDDKIVLRKFKIMLEGYS--EYPPIAFVLCGH 286
Query: 326 FCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALP 385
F S P S S L L +I +P + + S+F+F+P DD G +LP+ LP
Sbjct: 287 FLSFPAKPS--SRQKLIEGLKNLADIIIQYPDINQSSKFIFVPAIDDIGSPKILPKLPLP 344
Query: 386 KYLTEELQKYIPNAIFSSNPCRLNF 410
K LTE+ +K IP AIF++NPCR+ +
Sbjct: 345 KNLTEDFRKNIPGAIFATNPCRIQY 369
>gi|195492108|ref|XP_002093848.1| GE20528 [Drosophila yakuba]
gi|194179949|gb|EDW93560.1| GE20528 [Drosophila yakuba]
Length = 525
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 110/412 (26%), Positives = 191/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRVKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + R
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSTMRE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGHY-NNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPASSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPV 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 299 VMDKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|162944948|gb|ABY20543.1| SD18661p [Drosophila melanogaster]
Length = 525
Score = 144 bits (363), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSAMKE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E + S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPANSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPV 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 299 VMDKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|281183399|gb|ADA53568.1| FI13109p [Drosophila melanogaster]
Length = 527
Score = 144 bits (363), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 11 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 70
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 71 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTA 122
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 123 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSAMKE 181
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 182 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDG 240
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E + S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 241 LGFPPAEPANSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPV 300
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 301 VMEKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQL 353
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 354 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 405
>gi|24658786|ref|NP_647995.1| Pole2 [Drosophila melanogaster]
gi|7295418|gb|AAF50735.1| Pole2 [Drosophila melanogaster]
Length = 525
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSAMKE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E + S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPANSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPV 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 299 VMEKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|164660840|ref|XP_001731543.1| hypothetical protein MGL_1726 [Malassezia globosa CBS 7966]
gi|159105443|gb|EDP44329.1| hypothetical protein MGL_1726 [Malassezia globosa CBS 7966]
Length = 525
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 178/395 (45%), Gaps = 22/395 (5%)
Query: 37 DAEDEAIDLL----LDQFEHESSLKS---SIIDKESVNRVTSVLLQAEAAAEGDSGSASN 89
DA EAID L +DQ +++ ++ +++ +V LL A +
Sbjct: 52 DATTEAIDALASALVDQHVAGANIAGFDGHVVTAQALQKVYDQLLVESADDANANAMPLT 111
Query: 90 HSAI-------RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
+I V DAF P R+ + ++ F + + A A +A +R+ LL
Sbjct: 112 QGSIPDLARYFSVCDAFHQPYIRFHAPRQVFEKVGRRGSLLSGAQAPSAHMEERYQLLRS 171
Query: 143 RVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAA 201
V R++HF +S +++T + L+G+ G ++ G +S DG + LED
Sbjct: 172 IVLRNEHFLPALTGPTSSRSSMMQLTTTKHLLGRQGEHCLLFGRLSTSADGTYILEDTEG 231
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
V +DL +A G FTE V+ EGE +V G PP E R+ + ++ D++
Sbjct: 232 YVPLDLQQAVAGEGIFTEGAYVLIEGEYTNSEQLRVWAMGHPPSERREDARQIAGHLDWY 291
Query: 262 GGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFV 321
G G + + L E + + +LSD+ LD+ + L +L G++ + VP V
Sbjct: 292 GTGAVPTKHVSALRAQELQHPDVCVTVLSDVHLDDPVTLAHLRAILQGYQDADFVPLAIV 351
Query: 322 FMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPR 381
G+F S P + + + F +L ++ PRL E ++F+PG D + +LPR
Sbjct: 352 LCGHFSSTPVEVD-GALETYAASFARLADIMTRFPRLLESCHWVFVPGARDPAATPLLPR 410
Query: 382 CALPKYLTEELQKYIPNAI------FSSNPCRLNF 410
+P L E ++ +P + SNPCRL +
Sbjct: 411 PRIPAPLVERFERRLPRDFCETRLHWMSNPCRLVY 445
>gi|194867277|ref|XP_001972036.1| GG14105 [Drosophila erecta]
gi|190653819|gb|EDV51062.1| GG14105 [Drosophila erecta]
Length = 525
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/412 (26%), Positives = 192/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRVKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSAMKE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E + S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPANSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPV 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 299 VMDKLRQLFVGYDSCP--PQAIVLMGPFTT-----STRNHHELRHHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
++ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 RKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|195337751|ref|XP_002035489.1| GM13889 [Drosophila sechellia]
gi|194128582|gb|EDW50625.1| GM13889 [Drosophila sechellia]
Length = 525
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSVMKE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPATSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPI 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S ++ LR LG + A +L
Sbjct: 299 VMDKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNYHELRQHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|195588062|ref|XP_002083777.1| GD13171 [Drosophila simulans]
gi|194195786|gb|EDX09362.1| GD13171 [Drosophila simulans]
Length = 525
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/412 (26%), Positives = 191/412 (46%), Gaps = 24/412 (5%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I K+ G+ +R + + + F AE + ++ + L + +++ +
Sbjct: 9 RKRITNTFKLCGFLIRSENSSYLAEQLLPFDAAERDKWLTVITENLQSQKLLTPHVERAA 68
Query: 66 VNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE 125
+ + + L + G + +IDAF VP+FRY+ K F +
Sbjct: 69 LEKAINELNRV--------GLDEGETVFALIDAFTVPRFRYNQRIKKFELDTQPRQLLTA 120
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSF--DVVNSEFGS--CEISTIQSLVGQTGRR- 180
K+ + R+ +L Q+ R F+ P+ D V +E + ++ ++L+ + +
Sbjct: 121 PRMKSDYMQQRYAMLLQKTLRHDLFA-PAVIQDGVGAEAQAKKFKLQFAENLLATSAMKE 179
Query: 181 -WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
V+G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V
Sbjct: 180 AVVLGLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDG 238
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
GFPP E S + +GG + K + + L +LE+ V LSD+ LD
Sbjct: 239 LGFPPAEPATSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPV 298
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
VM KL + G++S P V MG F + S + LR LG + A +L
Sbjct: 299 VMDKLRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQL 351
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
K+ + + +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 352 KKQTDLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 403
>gi|430813107|emb|CCJ29523.1| unnamed protein product [Pneumocystis jirovecii]
Length = 503
Score = 141 bits (355), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 104/327 (31%), Positives = 165/327 (50%), Gaps = 35/327 (10%)
Query: 96 IDAFLVPKFRYDSIKKHFYQHAGSLP-IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS 154
+DAF PK+ +D K ++ + LP I G AS K ++YR+RF L+ QR+ + F P
Sbjct: 149 VDAFTQPKYVFDMTHK-LFKRSDELPKIFGNASHKISIYRERFYLIKQRLLSNPAFQEPG 207
Query: 155 FD--VVNSEFGSCEISTIQSLVGQTGRRW-VMGVISQLEDGHFYLEDLAASVEIDLSKAK 211
F + + E+ + G+ + ++G+IS DG +LED + ++ +A
Sbjct: 208 FYGLIFHKEWH------------KIGKEFMLLGMISYGPDGKLWLEDTDDRIMLETDEAI 255
Query: 212 ITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT 271
G+ I++A+G L +G F V G PP E + S KL DF G K D
Sbjct: 256 NGGGWVVPGCIILADGIYLENGAFHVFVFGHPPCEPKHLSEKLFEHVDFLG----KNYDE 311
Query: 272 L---RLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFE-SVEVVPSLFVFMGNFC 327
L RL D E + + FV +D+ LD+ M L +L+ +E ++ P V MG+F
Sbjct: 312 LTKKRLKDEEAKLDHIRFVFAADVMLDDISTMKALRKMLNMYEIRDDIFPEAIVLMGSFI 371
Query: 328 SHPCNLSFHS--FSS-LRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDA---GPSTVLPR 381
S P FH+ FS+ + F L ++ + P+L + S F+ +PGP+D G +LP+
Sbjct: 372 SAP----FHNNGFSADYKALFNSLAFLLESFPKLTQKSTFILLPGPNDPWAQGGIPLLPQ 427
Query: 382 CALPKYLTEELQKYIPNAIFSSNPCRL 408
+PK T ++K + IF+SNP RL
Sbjct: 428 KGIPKVFTNRIRKLCKHVIFASNPSRL 454
>gi|409079772|gb|EKM80133.1| hypothetical protein AGABI1DRAFT_99739 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 532
Score = 140 bits (354), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 199/419 (47%), Gaps = 13/419 (3%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDE---AIDLLLDQF--EHESS 55
M+ ++ I K + L DAL+ I + ED+ +I+ L + + +++
Sbjct: 1 MADARQRVIIKVFRKYSNALGPDALNLIEDILEEHDIPEDDLETSIETLARDYNKQDDAT 60
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
+K S+ E + RV + L + E + + + IDA+ +PK+ + + + F +
Sbjct: 61 MKVSV---EVLRRVYAKLQDQDDDDEIHKDGLNPENHLFFIDAYEMPKWHWSNERGSFER 117
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
+ SL + ++ RDR ++ Q + R++HF+ PS + + + L+G
Sbjct: 118 SSTSLSVSASPESRILAIRDRLDIIRQCILRNEHFA-PSTIPSRDREKLVTLKSTKQLLG 176
Query: 176 QTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGEMLVDG 233
+ G+R+++ G+++ ++G LED SV +D S + G +TE + EGE D
Sbjct: 177 RPGQRFLLLGMLTHNKEGKMCLEDADGSVVLDYSTLDEPGEGLYTEGCFALVEGEYTEDA 236
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDM-FVILSDI 292
++I G PP E R + + DF G G+ + LA + +DM F LSD+
Sbjct: 237 TLKIIAIGQPPSEPRATARSIYGHIDFLGKGSTSILEDAHLALRVREELHDMHFFFLSDV 296
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQFGKLGQM 351
WLD + + L + D + +P + V G+F S + S + F L +
Sbjct: 297 WLDVPDTLKNLRRMFDNCIENDFIPKVIVLCGDFSSKSISQGSGRDIQRYQDGFDTLADL 356
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+A +P + ++ FLF+PGP D +++LPR + +L+ IP F++NPCR+ F
Sbjct: 357 VAQYPSITRYTHFLFVPGPLDLTLNSILPRRPIMSSFLTKLKNKIPKIHFATNPCRIKF 415
>gi|388853381|emb|CCF53001.1| related to DNA polymerase epsilon subunit B [Ustilago hordei]
Length = 657
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/418 (26%), Positives = 192/418 (45%), Gaps = 67/418 (16%)
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGS------ASN-----------------HSAIR 94
S ++ ++ +V S L+ A++AA G+ A+N H
Sbjct: 95 SDVVTAAALEKVYSRLVVADSAAHTTQGALASTSLANNGVHRHPHELTDGELPDPHRYFG 154
Query: 95 VIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP- 153
V AF PK +D I+K F + + + A+A++ R R+ +L +SR+++F P
Sbjct: 155 VHSAFTQPKLAFDPIRKVFEPASIASTVLPTAAARSTFPRQRYHILKSVISRNENFCPPL 214
Query: 154 -----------SFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAA 201
S N+ G +++ ++L+G+ G R+++ G++S DG + LED+
Sbjct: 215 AIPTAAPSSSSSSSRNNTADGFMRLTSTKNLLGRQGHRFLLFGMLSTSSDGRYELEDVDG 274
Query: 202 SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
+V +DL A G FTE ++++ EGE VD +V G PP E R Q+ + A DF
Sbjct: 275 AVGLDLHDAIPGEGIFTEGSLILVEGEYTVDERIRVFAIGHPPSETRAQARLIHAHTDFL 334
Query: 262 G---------------GGT---------LKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
G GT +K+E ++ E ++ FVI SD+ LD+
Sbjct: 335 GPPQPPVLASASAPSRAGTSAPWRGAISVKEEAAFKVH--EANHSDLCFVIFSDLHLDHP 392
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
+ M VL G+ + +P V GNF S + S + F LG+ +++ P
Sbjct: 393 KTMSAFATVLQGYVDADFIPFALVLCGNFASQQYS-SADMIDMYKAGFAALGETLSSFPA 451
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTE----ELQKYIPNAIFSSNPCRLNFL 411
+ S + +PGP D ++++PR LP+ + + +L++ +SNPCR+++
Sbjct: 452 IVGTSDIILVPGPQDPFATSLVPRPPLPQLVVQALLSKLERLHATIHLASNPCRISYF 509
>gi|42409427|dbj|BAD10772.1| DNA polymerase epsilon subunit B-like protein [Oryza sativa
Japonica Group]
Length = 303
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/93 (64%), Positives = 78/93 (83%)
Query: 211 KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKED 270
KIT+GFF ENT+++AEGE+L +GIFQV TCGFPPLEDR+ SL +L G DFFGGG + E+
Sbjct: 135 KITSGFFVENTVILAEGELLSNGIFQVNTCGFPPLEDREASLSMLMGLDFFGGGVIAAEE 194
Query: 271 TLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
T+RL+ LEK+A NDMFVILSD+WLD+ E++ +
Sbjct: 195 TVRLSTLEKKAMNDMFVILSDVWLDSSELVATI 227
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/126 (42%), Positives = 80/126 (63%), Gaps = 13/126 (10%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE------------DEAIDLLLDQ 49
S TRKK+Q+K ++RG+ L++DAL+E +F+ RFPDAE E + L
Sbjct: 5 SAATRKKLQRKFRLRGFTLKVDALEEAAAFLARFPDAEDDALDLLLDELDKEPRNFSLPL 64
Query: 50 FEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSA-SNHSAIRVIDAFLVPKFRYDS 108
+ SSI+D+++V RV ++L++AE A + S +A S SA+RV+D+F+VP+F YD
Sbjct: 65 VSFGTRAVSSILDRDAVRRVVALLVEAEEAVDAASPAATSARSALRVVDSFVVPRFHYDP 124
Query: 109 IKKHFY 114
IKK FY
Sbjct: 125 IKKVFY 130
>gi|426198467|gb|EKV48393.1| hypothetical protein AGABI2DRAFT_150224 [Agaricus bisporus var.
bisporus H97]
Length = 532
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 198/419 (47%), Gaps = 13/419 (3%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDE---AIDLLLDQF--EHESS 55
M+ ++ I K + L DAL+ I + ED+ +I+ L + + +++
Sbjct: 1 MADTRQRVIIKVFRKYSNALGPDALNLIEEILEEHDIPEDDLETSIETLARDYNKQDDAT 60
Query: 56 LKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ 115
+K S+ E + RV + L + E + + + IDA+ +PK+ + + + F +
Sbjct: 61 MKVSV---EVLRRVYAKLQDQDDDDEIHKDGLNPENHLFFIDAYEMPKWHWSNERGSFER 117
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
+ SL + ++ RDR ++ Q + R++HF+ PS + + + L+G
Sbjct: 118 SSTSLSVSASPESRILAIRDRLDIIRQCILRNEHFA-PSTIPSRDREKLVTLKSTKQLLG 176
Query: 176 QTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGEMLVDG 233
+ G+R+++ G+++ ++G LED +V +D S + G +TE + EGE D
Sbjct: 177 RPGQRFLLLGMLTHNKEGKMCLEDADGTVVLDYSTLDEPGEGLYTEGCFALVEGEYTEDA 236
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDM-FVILSDI 292
++I G PP E R + + DF G G+ + LA + +DM F LSD+
Sbjct: 237 TLKIIAIGQPPSEPRATARSIYGHIDFLGKGSTSILEDAHLALRVREELHDMHFFFLSDV 296
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNL-SFHSFSSLRLQFGKLGQM 351
WLD + + L + D + +P V G+F S + S + F L +
Sbjct: 297 WLDVPDTLKNLRRMFDNCIENDFIPKAIVLCGDFSSKSISQGSGRDIQRYQDGFDALADL 356
Query: 352 IAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+A +P + ++ FLF+PGP D +++LPR + +L+ IP F++NPCR+ F
Sbjct: 357 VAQYPSITRYTHFLFVPGPLDLTLNSILPRRPIMSSFLTKLKNKIPKIHFATNPCRIKF 415
>gi|290996568|ref|XP_002680854.1| predicted protein [Naegleria gruberi]
gi|284094476|gb|EFC48110.1| predicted protein [Naegleria gruberi]
Length = 568
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 200/422 (47%), Gaps = 55/422 (13%)
Query: 26 DEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSG 85
DEI F+ F L D+ + +L +I+++ + + ++ + ++
Sbjct: 40 DEINEFLPEF-------FKFLQDKNVKDKNLSGELIEEKLKEFQSKRMDTSDDLVDDNTA 92
Query: 86 SASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVS 145
+ AI++I+A P + Y+ +K F E K ++RDR+ +++Q+V
Sbjct: 93 VLGHRDAIQIINAEDKPFYSYNMSRKVFEPEQRDTTFFSEVQQKVEVFRDRYKMIYQKVM 152
Query: 146 RDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEI 205
R + F+ ++ + +++I SL+G G +++MG+I++ + +EDL ++
Sbjct: 153 RGKQFNP-------TDPNAISLTSIDSLLGSRGSKYIMGLITRKSADIYQIEDLNGVTQV 205
Query: 206 DLSKAKITT-GFFTENTIVVAEGEM-LVDGIFQVITCGFPPLEDRDQSLKLL-----AGY 258
D+S++ G E + V+A G V +F+ P EDRD S + L +
Sbjct: 206 DISESTTNNRGTILEGSFVIASGVYDSVTKVFKASAIVLPTCEDRDDSERFLSVGRSSML 265
Query: 259 DFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF-------- 310
D FG + +K L+ + E N V++SD+ LD V KL ++ +
Sbjct: 266 DMFGSSSPEKLKELK--NKEDINKNAFIVVVSDVCLDKPLVFEKLALLFEYIKWNQHNRT 323
Query: 311 --ESVEVVPSLFVFMGNFCSHPCNLSFHSFSS----------LRLQFGKLGQMIAAH-PR 357
+S E++P++F+F+GNF S P F+S SS + F KL +MI P
Sbjct: 324 SEDSYELMPAMFLFIGNFISRP--FQFYSSSSSSSTTSDRVLYQKNFEKLAKMIEERFPN 381
Query: 358 LKEHSR-------FLFIPGPDDA--GPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRL 408
+S+ F+F+PGP+D P+ VLPR + ++ + IPN+ F++NPCR+
Sbjct: 382 FIYNSKENENAPTFVFVPGPNDPTFSPNGVLPRSPILDSISRTFKSRIPNSFFATNPCRI 441
Query: 409 NF 410
F
Sbjct: 442 RF 443
>gi|167522699|ref|XP_001745687.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776036|gb|EDQ89658.1| predicted protein [Monosiga brevicollis MX1]
Length = 460
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/341 (28%), Positives = 147/341 (43%), Gaps = 62/341 (18%)
Query: 102 PKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSE 161
P+ Y KK F I G A AKA L+RDR+ L+ QR+ R F+ D
Sbjct: 13 PRLTYYVDKKLFLPRDEPASIAGTADAKAVLFRDRYHLIRQRLLRHPVFAEGLIDD-QGN 71
Query: 162 FGSCEISTIQSLVGQTGR--------RWVMGVISQLEDGHFYLEDLAASVEIDL------ 207
++ I +L+ ++G V+G+++Q+++G LEDL + + L
Sbjct: 72 LVKQTLTPINALIAKSGMLTGQQRQIAVVLGLLTQIDNGKLALEDLDGVINLHLPTPDEL 131
Query: 208 ----------SKAKITT--------GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRD 249
S+A IT G +T+N IVV G DG F +T G PP E R
Sbjct: 132 RAFYTQTMGYSEADITPEVLNIFHEGLYTDNCIVVVRG-YFEDGRFVALTIGMPPAEARA 190
Query: 250 QSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDG 309
+L G +FFGG ++ L +R M LSD +LD+ +V+ + +L G
Sbjct: 191 DTLAAFPGLNFFGGSYNHRDRASLLR--SERENEAMVCFLSDFYLDDPDVLRNFDHMLAG 248
Query: 310 FESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPG 369
F +++ P+ FV MGNFCS P H+ + +PG
Sbjct: 249 FSAIQSYPTAFVLMGNFCSEPQRSDVHA--------------------------VIQVPG 282
Query: 370 PDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P D G VLPR LP L ++ ++NPCR+ +
Sbjct: 283 PQDPGAGNVLPRPPLPSALVRRFMTFVKRVHNATNPCRIRY 323
>gi|71016528|ref|XP_758907.1| hypothetical protein UM02760.1 [Ustilago maydis 521]
gi|46098338|gb|EAK83571.1| hypothetical protein UM02760.1 [Ustilago maydis 521]
Length = 632
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/353 (26%), Positives = 162/353 (45%), Gaps = 33/353 (9%)
Query: 90 HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
H V AF PK +D I+K F S + AS ++ R R+ +L + R+++
Sbjct: 148 HRYFGVHSAFTQPKLTFDPIRKVFEPTTLSATLLPTASTRSTFARQRYHILKGVILRNEN 207
Query: 150 FSRP-----SFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASV 203
F P + N G ++++ ++L+G+ G+R+++ G++S DG + LED +V
Sbjct: 208 FCPPLAIATASSSKNLADGFMKLTSTKNLLGRQGQRFLLFGMLSTSSDGRYELEDADGTV 267
Query: 204 EIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG 263
+DL A G FTE ++++ EGE V+ V G PP E R Q+ + A DF G
Sbjct: 268 GLDLHDAIPGEGIFTEGSLILVEGEYTVEERIHVFALGHPPSETRAQARSMHAHTDFLGP 327
Query: 264 ----------------------GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMG 301
G + ++ E ++ FVI SD+ LD+ + M
Sbjct: 328 PQTPILEPAGAPSRVAARAPWRGAISVKEEAAFQVHEANHSDLCFVIFSDLHLDHPKTMA 387
Query: 302 KLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEH 361
VL G+ + +P + GNF S + S + + F L + ++ P +
Sbjct: 388 AFATVLQGYVDADFIPFALMLCGNFASQQYS-SADTVDRYKAGFASLAETLSRFPAIVRS 446
Query: 362 SRFLFIPGPDDAGPSTVLPRCALPKYLTE----ELQKYIPNAIFSSNPCRLNF 410
S + +PGP D S+++PR LP+ L E +L+ +SNPCR+++
Sbjct: 447 SHIILVPGPQDPFASSLVPRPPLPQGLVEPLVSKLKTMHATIHLASNPCRISY 499
>gi|195428747|ref|XP_002062427.1| GK17530 [Drosophila willistoni]
gi|194158512|gb|EDW73413.1| GK17530 [Drosophila willistoni]
Length = 531
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 111/421 (26%), Positives = 190/421 (45%), Gaps = 34/421 (8%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDK 63
Q RK+I K+ G+ +R + + + F AE + ++ + L + +++
Sbjct: 7 QLRKRITNNFKLSGFLIRSENSSYLAEQLLPFDRAERDKWLTVITENLQGQKLATPHVER 66
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
++ + + L + G + VIDAF VP++RY+ K F A +
Sbjct: 67 SALEKAINELNRV--------GLDEGETVFAVIDAFTVPRYRYNQRNKKFELDAQPRQLL 118
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFD---VVNSEFGSCEISTIQSLVGQTGRR 180
+ K+ + R+ +L Q+ R F+ +++ ++ ++L+ +
Sbjct: 119 TQPGMKSTYLQQRYAMLLQKTLRHDLFAPAVIQDGVGADAQAKKFKLQFAENLLATNSMK 178
Query: 181 --WVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQV- 237
V+G+++QL++G FY+ED V++DLS A+ GFF E V+AEG+ +G+ +
Sbjct: 179 EAVVLGLLTQLKEGKFYVEDPTGCVQLDLSGARFHAGFFCEGCFVLAEGKY-SNGVLKGK 237
Query: 238 -ITCGFPPLEDRDQSLKLLAGYDFFG-----GGTLKK--EDTLRLADLEKRAANDMFVIL 289
I + D Q + A FFG GG K + + RL +LE+ V L
Sbjct: 238 HILMAW----DSHQRRQPPAVVPFFGTANSWGGESGKLLKYSQRLQELERTNTETTIVFL 293
Query: 290 SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG 349
SD+ LD VM KL + G++S P V MG F S S + +R F LG
Sbjct: 294 SDVRLDLPIVMEKLRQLFVGYDSCP--PQAIVLMGPFSS-----SSKNQHEMRQHFDALG 346
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
+ A +LK + + +P +D +LPR LP+ L L K P ++NPCRL
Sbjct: 347 GLAAGCDQLKRQTDLILVPSTEDPTAPNILPRAPLPECLAAGLIKAWPRTQLATNPCRLQ 406
Query: 410 F 410
+
Sbjct: 407 Y 407
>gi|443894338|dbj|GAC71686.1| DNA polymerase epsilon, subunit B [Pseudozyma antarctica T-34]
Length = 659
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 161/353 (45%), Gaps = 33/353 (9%)
Query: 90 HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
H V A PK +D I+K F +G + ASA++A R RF +L V R+++
Sbjct: 150 HRYFGVHSALSQPKLAFDPIRKVFEPASGPSTVLPMASARSAFPRQRFHILKSVVLRNEN 209
Query: 150 FSRP-----SFDVVNSEFGS-CEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAAS 202
F P + +E S ++++ ++L+G+ G+R+++ G++S DG + LED
Sbjct: 210 FCPPLAIPAAGSSAKAEADSFMKLTSTKNLLGRQGQRFLLFGMLSTSSDGRYELEDADGC 269
Query: 203 VEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG 262
V +DL A G FTE + ++ EGE V+ +V G PP E R Q+ + A DF G
Sbjct: 270 VGLDLEHAIAGEGIFTEGSFILVEGEYTVEERIRVFAIGHPPSETRKQARAMHAHTDFLG 329
Query: 263 G---------------------GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMG 301
G + +D A E ++ F I SD++LD+ + +
Sbjct: 330 APQPPIVAPASAASRSAAVSWRGAISVKDEAAFAVHEANHSDLCFAIFSDVYLDHAKTLV 389
Query: 302 KLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEH 361
L VL G+ E +P V GNF SH + S + F L + + P +
Sbjct: 390 ALAAVLQGYVDAEFIPFALVLCGNFASHQVS-SDDLVERYQAGFAALADTLISFPAVLRK 448
Query: 362 SRFLFIPGPDDAGPSTVLPR----CALPKYLTEELQKYIPNAIFSSNPCRLNF 410
S + +PGP D ++++PR L + L L +SNPCR+++
Sbjct: 449 SHIVLVPGPQDPFHTSLVPRPPLPQLLVQPLLTRLAPLGATVHLASNPCRISY 501
>gi|170587260|ref|XP_001898396.1| DNA polymerase epsilon subunit B [Brugia malayi]
gi|158594222|gb|EDP32808.1| DNA polymerase epsilon subunit B, putative [Brugia malayi]
Length = 334
Score = 132 bits (331), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 164/342 (47%), Gaps = 55/342 (16%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+I+K ++R L +A++ A+ +L+D + E ++
Sbjct: 11 RKQIRKAFQMRALTLSKEAMEY--------------AVQILVD-LQSEERVRW------- 48
Query: 66 VNRVTSVLLQAEAAAE--------------GDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
+N+V SVL + +A+ S S+ S IRVID F VP+ RYD +K
Sbjct: 49 INKVISVLSKQKASGPVLSFNEFKSAVNECASSRSSKQESLIRVIDLFTVPRLRYDEQRK 108
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQ 171
G G+++ LYR+R L+ QR R NS F ++ T++
Sbjct: 109 MLVAVDGLSSAIGQSNDAKILYRERLKLVMQRALR------------NSAFEHYQLCTVE 156
Query: 172 SLVGQTGR---RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGE 228
+L+G R ++G+++Q + G + +EDL ++E+DL +A G FT+ I++ EG
Sbjct: 157 ALLGTPERSDNSVLIGMLTQRDPGVYEIEDLTGAIEVDLKEATFHKGLFTDGCIMMLEGR 216
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFV 287
V G+F+V G P+E + ++FGG GT+ +RL L +R F+
Sbjct: 217 S-VGGLFRVSAVGLAPVESATVTRNYFGVTNWFGGEGTVACGSQIRLRTLCERNDRTRFI 275
Query: 288 ILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH 329
++SD+WLD+ ++ + ++ F +++ F+ GNFCS
Sbjct: 276 LMSDVWLDDSRILSAINELIFAFTDSQLLA--FIICGNFCSQ 315
>gi|344253162|gb|EGW09266.1| DNA polymerase epsilon subunit 2 [Cricetulus griseus]
Length = 320
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 109/198 (55%), Gaps = 6/198 (3%)
Query: 214 TGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT-L 272
+G +TE V+AEG D +F V GFPP E + +FFGG + T
Sbjct: 29 SGLYTEACFVLAEG-WFEDQVFHVNAFGFPPTEPSSTTRAYYGNINFFGGPSNASVKTSA 87
Query: 273 RLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCN 332
+L LE + MFV +SD+WLD +V+ KL ++ G+ P+ F+ GNF S P
Sbjct: 88 KLRQLEDENKDAMFVFVSDVWLDQVQVLEKLHIMFSGYSPAP--PTCFILCGNFSSAP-- 143
Query: 333 LSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEEL 392
+ +L+ L +I +P + + SRF+F+PGP+D G ++LPR L + +T+E
Sbjct: 144 YGKNQVQALKDSLKSLADIICEYPSIHQSSRFVFVPGPEDPGFGSILPRPPLAESITQEF 203
Query: 393 QKYIPNAIFSSNPCRLNF 410
++ IP ++F++NPCR+ +
Sbjct: 204 RQRIPFSVFTTNPCRIQY 221
>gi|50288713|ref|XP_446786.1| hypothetical protein [Candida glabrata CBS 138]
gi|74609957|sp|Q6FSK8.1|DPB2_CANGA RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|49526094|emb|CAG59713.1| unnamed protein product [Candida glabrata]
Length = 719
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 176/365 (48%), Gaps = 49/365 (13%)
Query: 94 RVIDAFLVPKFRYDSIKKH-FYQ----HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQ 148
R+I+ KF Y+ +K+ FYQ S+ A AK L+R R+ L R+ R++
Sbjct: 198 RIINTTDQKKFSYNPVKRQIFYQPPKDQLKSVLKIPNAQAKTDLFRTRYFLTRDRLLRNE 257
Query: 149 HF--SRPSFDVVNSEF---------------GSCEISTIQSLVGQTGRRW-VMGVISQLE 190
F S +F+ ++S I+ I++L+G+ G+ + ++GV+
Sbjct: 258 SFQSSHDTFNPLSSMIQLKNNINNNNQDDTPTGLSITQIKNLLGRDGQNFLILGVLKMNP 317
Query: 191 DGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDG-IFQVITCGFPPLEDR 248
G + LED + S++ID+S+ + G F+ IV+AEG G F V + FPP E R
Sbjct: 318 KGQWSLEDASGSIDIDISQTLPSPGLFYIPGAIVLAEGIYYTVGHTFAVTSMTFPPGERR 377
Query: 249 DQSLKLLAGYDFFG-GGT--------LKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEE 298
D++L + D G GT L E +RL LE+ + FV+L D++LD++
Sbjct: 378 DKTLDHIGNLDLLGIHGTEKSSYIPRLDNEIKIRLHLLEQDLTHQKFVLLGGDLFLDDQH 437
Query: 299 VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF-----HSFSSLRLQFGKLGQMIA 353
VM L+ V + + P++ V G+F S P + + S + + F L +M++
Sbjct: 438 VMDGLKKVFTKLD--QEAPTVIVLFGSFSSFPVHAAMSSKNISSTTEYKNNFDSLAEMLS 495
Query: 354 AHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIFSSNPC 406
+ H+ + IPGP D G + LP+ ++P + ++ + K N ++SNP
Sbjct: 496 QFENIINHTHVVLIPGPHDPWVSLCSLGANGSLPQSSIPTHFSKRMNKICKNITWASNPT 555
Query: 407 RLNFL 411
R+ +L
Sbjct: 556 RIAYL 560
>gi|332018917|gb|EGI59463.1| DNA polymerase epsilon subunit 2 [Acromyrmex echinatior]
Length = 491
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 158/324 (48%), Gaps = 44/324 (13%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFY-QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
+ VID + +PK +YD KK F + S P E K+ +++ RF + + + R +
Sbjct: 85 TVFNVIDGYNIPKIKYDISKKKFVIDNENSYP---ETQYKSLVFKYRFEMAWYKTLRHKQ 141
Query: 150 FSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSK 209
F F+ + +T + ++S+L G+ Y +D
Sbjct: 142 FLSSKFE--------------KQQTHKTNLIPIEYLLSELRTGNVYFQD----------- 176
Query: 210 AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG---TL 266
F E IV+A G + D + V T PP+E + + FGG +L
Sbjct: 177 -----TFIMEGFIVIANG-VYKDDVLHVKTIDLPPIESSESLRSDFGDTNTFGGSHNISL 230
Query: 267 KKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNF 326
K + L++ E+ + M V ++++WLD V+ K + +LDG+ ++ P FV G+F
Sbjct: 231 KMSEKLQIH--EETNQDGMIVFIAELWLDVPHVLQKFKTILDGY--MDYPPIAFVLCGHF 286
Query: 327 CSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPK 386
S P N++ S +L F L ++I + +KE ++F+F+PGP D G +LP+ LPK
Sbjct: 287 LSFPTNIT--SAKTLITGFKNLVEIITQYTSIKEFTKFIFVPGPHDLGSPKILPKPPLPK 344
Query: 387 YLTEELQKYIPNAIFSSNPCRLNF 410
+ EE+ K IPNAIF++NPCR+ +
Sbjct: 345 CIIEEVTKMIPNAIFTTNPCRIQY 368
>gi|308470244|ref|XP_003097356.1| CRE-POLE-2 protein [Caenorhabditis remanei]
gi|308240205|gb|EFO84157.1| CRE-POLE-2 protein [Caenorhabditis remanei]
Length = 520
Score = 127 bits (320), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 198/411 (48%), Gaps = 32/411 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILS-FVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
R+++ K +I + L+ +A+ + F+ + + + +++ + ++ L+SS+I +E
Sbjct: 11 RRELIKTFQIHAFELKKEAVKLCVKLFIEHDKETRKKWTNKMIELLKKQT-LQSSLISEE 69
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
+ Q ++ D+G N V DAF + + +D + G+ +
Sbjct: 70 LIR---DTFRQCKSKGTQDAGKLLN-----VFDAFSLQPYDFDPELRKMVVRKGTTTLAA 121
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
++S+ + R RFLL+ QR +R S SF E T++S+V V+G
Sbjct: 122 DSSSFSHATRQRFLLVKQRAARCA--SLKSFKFTTCEILCNSTKTLKSVV-------VLG 172
Query: 185 VISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
+++Q + +++EDL+ S+E++ + K F E++I + EG + + +V
Sbjct: 173 MLTQQKADCYHIEDLSGSIEVEFKEDTKFHHALFHEHSIAIFEGN-FENSVLKVNEVAMV 231
Query: 244 PLEDRDQSLKLLAGYDFFGGG----TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
P+E + + K L+ + + GG + + LR A L K+ M + LSD++LD+ +
Sbjct: 232 PVESAEMTRKELSSNENWFGGEDKIAFRCSERLRSA-LAKQEDTSM-IFLSDVFLDDVKT 289
Query: 300 MGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLK 359
M L +L G++ + P + GNFCS P + L F L + +
Sbjct: 290 MRALNKLLIGYK--DQPPVAIILCGNFCSQPRQTD--TIDLLDRGFRYLANQLMQMKKEY 345
Query: 360 EHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
E ++F+F+PGPDD +VLPR LP L + + I + F+SNPCR+ F
Sbjct: 346 EKTQFIFVPGPDDPFVDSVLPRPHLPSLLFKHVSPII-SCTFASNPCRIQF 395
>gi|296423465|ref|XP_002841274.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637511|emb|CAZ85465.1| unnamed protein product [Tuber melanosporum]
Length = 663
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 163/347 (46%), Gaps = 34/347 (9%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VIDAF PKF Y+ +KK F + A + K L+R R+ LL QR+ R + F
Sbjct: 188 LKVIDAFSQPKFAYNPLKKQF-EKAPKPSLLPPPQTKTQLFRTRYNLLHQRLLRTETFQL 246
Query: 153 PSFDVVNSEFGSC--EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK 209
P+F +S ++ I +L+G++G+ +++ G++ G L D + + +DLS
Sbjct: 247 PTFSAASSSAAKAVNRLTPISNLLGRSGQSFLLFGMLGVSPSGLLILLDPSGEIVLDLSI 306
Query: 210 AKITT---GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTL 266
A +FT + +G G F V T G P E R S+++ DF G G
Sbjct: 307 ATAIPEDGSWFTPGCFCILDGAFEETGKFTVFTVGQPCAERRATSVEVFGHVDFLGNGVT 366
Query: 267 ---------KKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVP 317
++ LR A EK + ++ + ++ LD + + L V +E+ P
Sbjct: 367 LDMSVSSGGQQGRILRKA--EKSLEHVKYLFIGEVELDGKGTLRALRKVFSEYETEP--P 422
Query: 318 SLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD----- 372
+ V MGNFCS S S + F +L ++ P L S F+F+PG +D
Sbjct: 423 LVVVLMGNFCSVAMGSSGGSV-GYKEYFDQLASLLQDFPTLTSSSTFIFVPGDNDPWAST 481
Query: 373 --AGPSTVLPRCALPKYLTEELQKYI-----PN-AIFSSNPCRLNFL 411
G ST LPR +P+ T +++ PN AI++SNPCR+ +
Sbjct: 482 FSGGASTTLPRKPIPEIFTTRIKRVFTQSRGPNSAIWASNPCRIGYF 528
>gi|25150040|ref|NP_501489.2| Protein POLE-2 [Caenorhabditis elegans]
gi|21431777|sp|Q19196.2|DPOE2_CAEEL RecName: Full=Probable DNA polymerase epsilon subunit 2; AltName:
Full=DNA polymerase II subunit 2; AltName: Full=DNA
polymerase epsilon subunit B
gi|351060026|emb|CCD67651.1| Protein POLE-2 [Caenorhabditis elegans]
Length = 534
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 118/423 (27%), Positives = 200/423 (47%), Gaps = 56/423 (13%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEA--------IDLLLDQFEHESSLK 57
R++I K +I + L+ +A+ V F D + E I+LL Q +L+
Sbjct: 11 RREIVKTFQIHAFELKKEAVKLC---VKLFLDHDKETRKKWTNKMIELLKKQ-----TLQ 62
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHA 117
SS+I +E + Q ++ D+G N V DAF + + +D+ +
Sbjct: 63 SSLISEELIR---DTFRQCKSKGTQDAGKLLN-----VFDAFSLQPYDFDADLRKMVLRK 114
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEI-----STIQS 172
+ ++S+ + R RF ++ QR R + N +F +CEI +QS
Sbjct: 115 EKTSLAADSSSFSHAARQRFFIVKQRAMR-------CASLKNFKFTTCEILGSSTKHLQS 167
Query: 173 LVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLV 231
+V V+G+++Q + +++EDL+ SVE++ + K F E++I + EG
Sbjct: 168 VV-------VLGMLTQQKADCYHIEDLSGSVEVEFKEDTKFHHALFHEHSIAIFEG-TFE 219
Query: 232 DGIFQVITCGFPPLEDRDQSLK-LLAGYDFFGGG---TLKKEDTLRLADLEKRAANDMFV 287
+ + V P+E + + K L + ++FGG + D LR A L K+ + V
Sbjct: 220 NSVLTVNEVAMVPVESAEVTRKELSSNENWFGGDDKIAFRCSDRLRSA-LAKQEDTSL-V 277
Query: 288 ILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGK 347
LSD++LD+++VM + +L G++ + P VF GNFCS P + L F
Sbjct: 278 FLSDVFLDDKKVMKAVFKLLQGYK--DQPPVAIVFCGNFCSRPRQTD--TIDLLDRGFRW 333
Query: 348 LGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCR 407
L + + E ++F+F+PGPDD TVLPR LP L + + I + F+SNPCR
Sbjct: 334 LANQLTPLRKDYEKTQFIFVPGPDDPFVDTVLPRPHLPSLLFKHISPII-SCTFASNPCR 392
Query: 408 LNF 410
+ F
Sbjct: 393 IQF 395
>gi|307171610|gb|EFN63395.1| DNA polymerase epsilon subunit 2 [Camponotus floridanus]
Length = 490
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 156/323 (48%), Gaps = 43/323 (13%)
Query: 91 SAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
+ VI + +PK +YD KK F +L + E K+ +++ RF +++ + R + F
Sbjct: 85 TVFNVISGYDIPKIKYDICKKKFTIDNENL--YPETQYKSLIFKHRFEMVWYKTLRHKQF 142
Query: 151 SRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA 210
F+ + +T + ++S+L+ G + +
Sbjct: 143 QSSKFE--------------KQQADKTNIIPIEYLLSELKTGRDFQD------------- 175
Query: 211 KITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGG---TLK 267
F E IV+ G + D + V FPP+E + + FGG +LK
Sbjct: 176 ----TFIMEGCIVIVNG-VYKDDVLHVENVNFPPIESSESMRSDFGDTNTFGGPHNLSLK 230
Query: 268 KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFC 327
+ L++ E+ + M + ++++WLD V+ K + VL+G+ + P FV G+F
Sbjct: 231 MSEKLQIH--EENDPDGMIIFIAELWLDMPNVLQKFKTVLEGY--TDYPPIAFVLCGHFL 286
Query: 328 SHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKY 387
S P N++ S +L F L +IA +P +KE S+F+F+PGP D G +LP+ LPK
Sbjct: 287 SFPTNVT--SPQALITGFKNLADVIAQYPNVKESSKFVFVPGPHDLGSPKILPKPPLPKC 344
Query: 388 LTEELQKYIPNAIFSSNPCRLNF 410
+ EE+ K +PNAIF++NPCR+ +
Sbjct: 345 IVEEVTKLVPNAIFTTNPCRIQY 367
>gi|16769320|gb|AAL28879.1| LD25702p [Drosophila melanogaster]
gi|42407253|dbj|BAD10843.1| DNA polymerase epsilon second subunit [Drosophila melanogaster]
Length = 403
Score = 125 bits (313), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 142/288 (49%), Gaps = 14/288 (4%)
Query: 129 KAALYRDRFLLLFQRVSRDQHFSRPSF-DVVNSEFGS--CEISTIQSLVGQTGRR--WVM 183
K+ + R+ +L Q+ R F+ D V +E + ++ ++L+ + + V+
Sbjct: 2 KSDYMQQRYAMLLQKTLRHDLFAPAVIQDGVGAEAQAKKFKLQFAENLLATSAMKEAVVL 61
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
G+++QL++G FY+ED V++DL+ A+ GFF E V+AEG +G+ +V GFP
Sbjct: 62 GLLTQLKEGKFYVEDPTGCVQLDLTGARFHAGFFCEGCFVLAEGNY-NNGVLKVDGLGFP 120
Query: 244 PLEDRDQSLKLLAGYDFFGGGTLK-KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGK 302
P E + S + +GG + K + + L +LE+ V LSD+ LD VM K
Sbjct: 121 PAEPANSSRAFFGTANTWGGESAKLLKYSAGLQELERTNTETTIVFLSDVRLDLPVVMEK 180
Query: 303 LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362
L + G++S P V MG F + S + LR LG + A +LK+ +
Sbjct: 181 LRQLFVGYDSCP--PQAIVLMGPFTA-----STRNHHELRHHLDALGGLAAGCEQLKKQT 233
Query: 363 RFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ +P +D +LPR +P+ L L K P ++NPCRL +
Sbjct: 234 DLILVPSSEDPTAPNILPRAPIPECLAAGLLKAWPRTQLATNPCRLQY 281
>gi|312101446|ref|XP_003149646.1| hypothetical protein LOAG_14095 [Loa loa]
Length = 260
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 7/227 (3%)
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPP 244
+++Q G + +EDL ++E+DL ++ G FT+ I++ EG + G+F+V G P
Sbjct: 1 MLTQRNPGVYEIEDLTGAIEVDLKESTFHKGLFTDGCIMMLEGRS-IGGVFRVSAVGLAP 59
Query: 245 LEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
+E + ++FGG GT+ +RL L +R F+++SD+WLD+ ++ +
Sbjct: 60 IESAKMTRNYFGITNWFGGKGTVACGSQIRLRTLCERNDRARFILMSDVWLDDSRILNAI 119
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363
++ F +++ F+ GNFCS ++ + F L ++ +
Sbjct: 120 NELIFAFTDSQLLA--FIICGNFCSQVGTAD--AYHRIYDGFSHLAAILQKDVLADRNVH 175
Query: 364 FLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
F+FIPGPDD +++LPR LP L EL K +PN F+SNPCR+ +
Sbjct: 176 FIFIPGPDDPSLNSILPRPPLPFELF-ELMKDVPNCSFASNPCRIQY 221
>gi|393907080|gb|EJD74509.1| DNA polymerase epsilon subunit 2 [Loa loa]
Length = 347
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 120/227 (52%), Gaps = 7/227 (3%)
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPP 244
+++Q G + +EDL ++E+DL ++ G FT+ I++ EG + G+F+V G P
Sbjct: 1 MLTQRNPGVYEIEDLTGAIEVDLKESTFHKGLFTDGCIMMLEGRS-IGGVFRVSAVGLAP 59
Query: 245 LEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
+E + ++FGG GT+ +RL L +R F+++SD+WLD+ ++ +
Sbjct: 60 IESAKMTRNYFGITNWFGGKGTVACGSQIRLRTLCERNDRARFILMSDVWLDDSRILNAI 119
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363
++ F +++ F+ GNFCS ++ + F L ++ +
Sbjct: 120 NELIFAFTDSQLL--AFIICGNFCSQVGTAD--AYHRIYDGFSHLAAILQKDVLADRNVH 175
Query: 364 FLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
F+FIPGPDD +++LPR LP L EL K +PN F+SNPCR+ +
Sbjct: 176 FIFIPGPDDPSLNSILPRPPLPFELF-ELMKDVPNCSFASNPCRIQY 221
>gi|254571769|ref|XP_002492994.1| Second largest subunit of DNA polymerase II (DNA polymerase
epsilon) [Komagataella pastoris GS115]
gi|238032792|emb|CAY70815.1| Second largest subunit of DNA polymerase II (DNA polymerase
epsilon) [Komagataella pastoris GS115]
gi|328352992|emb|CCA39390.1| DNA polymerase epsilon subunit 2 [Komagataella pastoris CBS 7435]
Length = 630
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/342 (25%), Positives = 164/342 (47%), Gaps = 45/342 (13%)
Query: 102 PKFRYDSIKKH------FYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF 155
P FR++S+K+ + Q+ S + S+ ++ +R+ L+++R RD+ F +P+
Sbjct: 157 PLFRFNSLKRQLELFRRYPQNPLSPANLAQTSSAVEMFLNRYNLVYERFIRDEEF-KPT- 214
Query: 156 DVVNSEFGSCEISTIQSLVGQTGRRW-VMGVISQLEDGHFYLEDLAASVEIDLSKAKITT 214
++ I++L+G+ G R+ + G+IS G+ L+D + ++E+D+S+ +
Sbjct: 215 -----------VTRIKNLLGRNGSRFLIFGLISYNNSGNLQLQDDSDAIELDISRCTFSM 263
Query: 215 GFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT--- 271
G+F +VV +G +F ++ PP E R+ S++++ D G + K+ T
Sbjct: 264 GYFVPGCLVVCDGIYSKKNVFHCLSIAHPPAEKRETSMEIIGNLDLLGIHSTSKQITKID 323
Query: 272 ----LRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEV-----VPSLFV 321
L+L EK+ + +IL DI+LD+ V+ L+ + V +P V
Sbjct: 324 PDLKLKLMTTEKQLDSHKILILGGDIFLDDLNVLDALKKLFAKLTQTFVDNQVDLPLSIV 383
Query: 322 FMGNFCSHP--C---NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS 376
G F +P C N SF S +S + F L ++ P + +H+ +F+P +D PS
Sbjct: 384 LNGPFTKYPLSCSPINFSFSSIASYKAGFDSLASILEKFPEICKHTTIIFVPHDNDLWPS 443
Query: 377 TV-------LPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
V P + +L + I + +SNP +LN+L
Sbjct: 444 IVHRGTSSLWPHQPISNTFITKLTRIIKTCLVASNPTKLNYL 485
>gi|219130121|ref|XP_002185221.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403400|gb|EEC43353.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 574
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 115/412 (27%), Positives = 200/412 (48%), Gaps = 37/412 (8%)
Query: 9 IQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNR 68
I + K RG+ ++ AL + +++ D E + ++ + +L + D
Sbjct: 41 IVRACKARGWTIQPAALAGVEAYLGSSRDGSLEDLLNVVAERIPGQTLTGDLWDD----- 95
Query: 69 VTSVLLQAEAAAEGDSGSASNHS-----AIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
+ EAA G S S + + +++++AF PK ++ ++K+F +
Sbjct: 96 -----IAGEAADTGRSASTTMTTTDAWDGLQIVNAFQSPKLVFEVMRKNFAVDEKPRSLF 150
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR--W 181
G A K ++ R+ ++ QR+ R + F RP+ + +++ ++SL+G+ +
Sbjct: 151 GTAEDKISMLAQRYAMVHQRILRHKLF-RPADLHARQQSIQHKLTPVESLLGKHDNQSLL 209
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFF-TENTIVVAEGEMLVDGIFQVITC 240
++G++ Q+E+G +YLED V+I A GFF TE+ I++ EG M DG F V
Sbjct: 210 ILGILLQIEEGQWYLEDPTGQVQISFQDASAVDGFFVTEHCILLVEG-MFRDGTFCVHRL 268
Query: 241 GFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
G P LE R+ SL+ + F ++ L + + K ++ V+LSD+ LD V+
Sbjct: 269 GHPLLESRETSLQTIRQQVFHPS---FRKPVLTVGSMTKESS---LVVLSDLHLDQPRVL 322
Query: 301 GKLEVVLDGFE--SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRL 358
+LE + ++ + + +P LFV MGNF S P + S L +L +I L
Sbjct: 323 QQLESLFATYDKYAPDRLP-LFVLMGNFSSTPQSHP----SQLTPLLDELATLIGCFANL 377
Query: 359 KEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+ H+ F +PGP D G VLP AL K T L K I + +SNPCR+ +
Sbjct: 378 RAHAHFCLVPGPHD-GVGYVLPLPALRK--THALDK-IAHVHLASNPCRIQW 425
>gi|339239599|ref|XP_003381354.1| DNA polymerase epsilon subunit 2 [Trichinella spiralis]
gi|316975620|gb|EFV59030.1| DNA polymerase epsilon subunit 2 [Trichinella spiralis]
Length = 378
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/252 (34%), Positives = 129/252 (51%), Gaps = 24/252 (9%)
Query: 148 QHFSRPSFDVVNSEFGSC-----------EISTIQSLVGQTGR---RWVMGVISQLEDGH 193
QH P+ ++N E + ++ T++SL G G ++G++SQL+
Sbjct: 11 QHLIWPTIRLLNHELFTIDEPSVFNAKKYQLRTVESLCGFQGSLKSTVIVGMMSQLKHHT 70
Query: 194 FYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLK 253
F+LEDL +E++L++ G + EN IV+ EG + D I T GFPP+E +QSL
Sbjct: 71 FHLEDLTGDIEMNLTETNFQPGLYVENMIVMVEG-FVSDSILHATTIGFPPIESAEQSLN 129
Query: 254 LLAGYDFFGGGTLKKEDTLR-LADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFES 312
L D FGG KE L L+ LE+ + MF+ LSDI+LD+ +V L + DGF
Sbjct: 130 HLDNMDLFGGQKEIKELNLNELSQLEE-TFDAMFIFLSDIFLDSPKVRKALNCLFDGFS- 187
Query: 313 VEVVPS---LFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPG 369
E PS FVF G F S + S L+ F L ++ +P L + ++F+FIP
Sbjct: 188 -ENDPSQLLFFVFSGEFLSEYYGIQ--QASVLQDGFKALADIVVNYPNLVKRAQFIFIPS 244
Query: 370 PDDAGPSTVLPR 381
DA + +PR
Sbjct: 245 SADAVFTDTIPR 256
>gi|190344359|gb|EDK36022.2| hypothetical protein PGUG_00120 [Meyerozyma guilliermondii ATCC
6260]
Length = 639
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 168/365 (46%), Gaps = 52/365 (14%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR- 152
+VI+ P +R+D +K F S + + + + R+ LL R+SR+++F +
Sbjct: 124 KVINPPQQPNYRFDRQRKQFSLEKPST-LSDAVTTNISYFNSRYHLLADRLSRNENFQKS 182
Query: 153 --PSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK 209
SF S EI+ I++++G+ G ++++ G++S+ +G + LED +E++LS+
Sbjct: 183 SLASFSAATHSVQSTEITLIKNVLGRDGLKFILFGLLSKNANGDYILEDATDHIELNLSQ 242
Query: 210 AKITTG-FFTENTIVVAEG-----------EMLVDGIFQVITCGFPPLEDRDQSLKLLAG 257
A T G ++ VV EG L+ G F V G PP E RD SL+
Sbjct: 243 AHKTEGSYYCSGMFVVVEGIYSASGGTLSSANLIGGCFHVSHIGQPPAERRDLSLENFGN 302
Query: 258 YDFFG---------GGTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVL 307
DF G TLKK RLA +EK + V L ++ +LD+ V+ L+ +
Sbjct: 303 LDFVGINSDTSTKLNKTLKK----RLASIEKSLVDHKIVFLGANCFLDDARVLEGLKRLF 358
Query: 308 DGFE----SVEVVPSLFVFMGNFCSHPC------NLSFHSFSSLRLQFGKLGQMIAAHPR 357
FE E P V G+F S P + + S + F + +++
Sbjct: 359 STFERDIVDGEKAPLAIVMYGSFISGPMTATSTSISTISNSESYKNNFDEFTSILSKFKY 418
Query: 358 LKEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEELQKYIP--NAIFSSNPC 406
L + ++F+ IPGP+D +T LP+ +P L++ +P N I + NP
Sbjct: 419 LIQDTKFVMIPGPNDPWQATYSLGSSNLNALPQQPIPSIFASRLERLLPKGNLILAFNPS 478
Query: 407 RLNFL 411
RL +L
Sbjct: 479 RLCYL 483
>gi|254580998|ref|XP_002496484.1| ZYRO0D01166p [Zygosaccharomyces rouxii]
gi|238939376|emb|CAR27551.1| ZYRO0D01166p [Zygosaccharomyces rouxii]
Length = 686
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 176/366 (48%), Gaps = 52/366 (14%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHA-GSLPIHGEASAK-----AALYRDRFLLLFQRVSRD 147
++++A P+F YD +K F A S P++ E A L+ R+ L+ RV R+
Sbjct: 167 KIVNANEQPRFNYDPVKMQFIPSARKSKPLNNEFKLPEIKDYATLFSTRYYLVRDRVMRN 226
Query: 148 QHFSRPSFDVVN-----------------SEFGSCEISTIQSLVGQTGRRWVM-GVISQL 189
++F + D +N S + I+ I++L+G+ G+ +++ G++
Sbjct: 227 ENFQ--NVDTLNPLSSMVGLQQELQNGKSSNSNNMVITQIKNLIGRDGQNFLLLGLLRTN 284
Query: 190 EDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDG-IFQVITCGFPPLED 247
G++ LED + S+EID+S+ T+G ++ V+AEG G F V + PP E
Sbjct: 285 AKGNWCLEDPSGSIEIDISQTLPTSGSYYVSGCFVLAEGIYFTAGNKFHVASITHPPGER 344
Query: 248 RDQSLKLLAGYDFFGGGT---------LKKEDTLRLADLEKRAANDMFVILS-DIWLDNE 297
RD +L + D G + L K+ +RL LEK + FVIL D++LD
Sbjct: 345 RDFTLNAIGNLDMLGLHSPSNSSLVPRLDKDLKIRLHLLEKELVDHKFVILGGDMFLDQL 404
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSS-----LRLQFGKLGQMI 352
M L VL + E P++ VF G+F + P + S S ++ + F L ++
Sbjct: 405 STMEALRKVLTILD--ENPPTVIVFQGSFSTTPVHASLSSKTTSLSTHYKNNFDTLATLL 462
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTV-------LPRCALPKYLTEELQKYIPNAIFSSNP 405
A + E+S +F+PG +D S + P+ ++P T+++ K N I++SNP
Sbjct: 463 ARFENIVENSTLVFVPGVNDPWKSMISLGAAYSWPQRSIPSSFTQKMDKVCKNIIWASNP 522
Query: 406 CRLNFL 411
R+ ++
Sbjct: 523 TRIAYI 528
>gi|146421596|ref|XP_001486743.1| hypothetical protein PGUG_00120 [Meyerozyma guilliermondii ATCC
6260]
Length = 639
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/365 (27%), Positives = 168/365 (46%), Gaps = 52/365 (14%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR- 152
+VI+ P +R+D +K F S + + + + R+ LL R+SR+++F +
Sbjct: 124 KVINPPQQPNYRFDRQRKQFSLEKPST-LSDAVTTNISYFNSRYHLLADRLSRNENFQKS 182
Query: 153 --PSFDVVNSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK 209
SF EI+ I++++G+ G ++++ G++S+ +G + LED +E++LS+
Sbjct: 183 SLASFSAATHSVQLTEITLIKNVLGRDGLKFILFGLLSKNANGDYILEDATDHIELNLSQ 242
Query: 210 AKITTG-FFTENTIVVAEG-----------EMLVDGIFQVITCGFPPLEDRDQSLKLLAG 257
A T G ++ VV EG L+ G F V G PP E RD SL+
Sbjct: 243 AHKTEGSYYCSGMFVVVEGIYSASGGTLSSANLIGGCFHVSHIGQPPAERRDLSLENFGN 302
Query: 258 YDFFG---------GGTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVL 307
DF G TLKK RLA +EK + V L ++ +LD+ V+ L+ +
Sbjct: 303 LDFVGINSDTSTKLNKTLKK----RLASIEKSLVDHKIVFLGANCFLDDARVLEGLKRLF 358
Query: 308 DGFE----SVEVVPSLFVFMGNFCSHPCNLSFHSFSSL------RLQFGKLGQMIAAHPR 357
FE E P V G+F S P + S++ + F + +++
Sbjct: 359 STFERDIVDGEKAPLAIVMYGSFISGPMTATSTLISTISNSESYKNNFDEFTSILSKFKY 418
Query: 358 LKEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEELQKYIP--NAIFSSNPC 406
L + ++F+ IPGP+D +T LP+ +P L++ +P N I + NP
Sbjct: 419 LIQDTKFVMIPGPNDPWQATYSLGSSNLNALPQQPIPSIFASRLERLLPKGNLILAFNPL 478
Query: 407 RLNFL 411
RL +L
Sbjct: 479 RLCYL 483
>gi|444320007|ref|XP_004180660.1| hypothetical protein TBLA_0E00800 [Tetrapisispora blattae CBS 6284]
gi|387513703|emb|CCH61141.1| hypothetical protein TBLA_0E00800 [Tetrapisispora blattae CBS 6284]
Length = 691
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 110/423 (26%), Positives = 187/423 (44%), Gaps = 57/423 (13%)
Query: 44 DLLLDQFEHE-----SSLKSSIIDKESVNRVTSVLLQAEA--------AAEGDSGSASNH 90
D+ +DQ ++E +SL S ID +S + + E+ + E +
Sbjct: 125 DMDIDQDDNEMPLQNTSLPSLPIDMDSQDTINITQEPQESQESREPIQSLEDQATELDWQ 184
Query: 91 SAIRVIDAFLVPKFRYDSIKKHF-YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
++I A+ KF YD IK F Y + I K L++ R+ L RV R++
Sbjct: 185 DYFKLIGAWDQQKFTYDPIKSQFRYSQSQKKKILPNIEDKLNLFKTRYNLTKDRVLRNED 244
Query: 150 FSR-------PSFDVVNSEFG---------SCEISTIQSLVGQTGRRW-VMGVISQLEDG 192
F S +N+E + I+ I++L+GQ GR + +MG+I + G
Sbjct: 245 FQNVDTFNPLSSIVAMNNELNQQSTNAIDNNVSITPIKNLIGQDGRNFLIMGMIYKSPRG 304
Query: 193 HFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDG-IFQVITCGFPPLEDRDQ 250
+ +ED + S+EI++S+ T G ++ IV+AEG G F V + PP E R
Sbjct: 305 RWCMEDASGSIEINISQTIPTDGTYYVPGCIVIAEGIYFSAGDTFHVTSMTQPPGEKRLN 364
Query: 251 SLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVM 300
+L+ + D G L E +RL LE+ +++FVIL D++LD +
Sbjct: 365 TLEAIGNLDLLGVHGQSNVNYISRLDNELKIRLHYLERELTDNIFVILGGDLFLDELKTF 424
Query: 301 GKLEVVLDGFESVEVVPSLFVFMGNFCSHP--CNLSFHSFSS---LRLQFGKLGQMIAAH 355
L+ + + E P + + +G+F P ++ H SS + F L ++
Sbjct: 425 DALKKIFEKLN--EDPPIVLILLGSFSQKPIFATMNNHRISSSEQYKNNFDTLATLLTQF 482
Query: 356 PRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRL 408
L + F+FIPG +D G ST LP+ +P+ ++ + + +NP RL
Sbjct: 483 ENLIATTTFIFIPGVNDPWGSSVSLGSSTTLPQRNIPEEYQSKINRICKKTYWGTNPMRL 542
Query: 409 NFL 411
+L
Sbjct: 543 AYL 545
>gi|453084781|gb|EMF12825.1| DNA_pol_E_B-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 792
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 124/461 (26%), Positives = 196/461 (42%), Gaps = 96/461 (20%)
Query: 33 NRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSA 92
N F D A+D+L D+ E E S I S RV S A E D GS+
Sbjct: 158 NSFAFGNDSAVDILGDRPELERQGSSYGI---SGLRVQS---PASGPEEEDHGSSEPRKW 211
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P+F +D KKHF + + K A++++R+ ++ QR+ R+ F
Sbjct: 212 LKVISAFEQPRFTFDMDKKHFLRVEIKPTLFPNPRQKTAVFKERYNIIHQRLLRNPAFQA 271
Query: 153 PSFDV---------VNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAAS 202
PS +E +I+ I +L+G+ G ++G+++ G L D++ S
Sbjct: 272 PSISAGVPTLKRHGTVTERTFYKITPIANLLGRGGSSHLLLGMLAIAPTGTLALNDMSGS 331
Query: 203 VEIDLSKA-KITTG--FFTENTIVVAEGEMLVDGIFQV---------------------- 237
+ +DL A + G +F IV LVDG+++
Sbjct: 332 ISLDLQHATSMQDGQPYFCPGMIV------LVDGVYEEDWAGAGSSGLGNTGGVGGTIGG 385
Query: 238 ----ITCGFPPLEDRDQSLKL------LAG----YDFFGGGTLKKEDTLRLADLEKRAAN 283
G PP+E RD SL + L G DF G G+ + T R+ LE R
Sbjct: 386 RFVGFEIGSPPVERRDISLGINLKAEDLGGGFGWADFLGLGSERAVGT-RMKKLESRLVG 444
Query: 284 D---------MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLS 334
VILS + LD + L +L+ +E+ E +P FV G+F S ++
Sbjct: 445 PESDIDDDARKMVILSGVTLDQPSTLTALRKLLEQYEAAEQLPMGFVLAGDFSSK-AAMA 503
Query: 335 FHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALP 385
S+ + F +L +++ P L ++F+PG +D AG ST+LPR +P
Sbjct: 504 GAGTGSIEYKELFNELAAVLSDFPALLRSCTWVFMPGDNDPWASSFSAGASTLLPREGVP 563
Query: 386 KYLTEELQKYIPN---------------AIFSSNPCRLNFL 411
T +++ N AI++SNP RL+F
Sbjct: 564 DLFTNRIKRAFANAKAEVGAKKGEADGEAIWTSNPTRLSFF 604
>gi|307203235|gb|EFN82390.1| DNA polymerase epsilon subunit 2 [Harpegnathos saltator]
Length = 487
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/326 (27%), Positives = 158/326 (48%), Gaps = 46/326 (14%)
Query: 88 SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRD 147
+ + VID + +PK YD KK + + I+ E K+ +++ RF +++ + R
Sbjct: 82 NTETVFNVIDGYNIPKITYDICKKKYIIDSNK--IYPEVQCKSLIFKHRFEMVWYKTLRH 139
Query: 148 QHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDL 207
+ F F+ ++ I+ I + ++S+L+ G+
Sbjct: 140 KQFLSSKFERQPADM----INLIP----------IEYLLSELKTGN-------------- 171
Query: 208 SKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG---G 264
F E +V+A G M D I V FPP+E + + FGG
Sbjct: 172 ------DAFIMEGCMVIANG-MYKDDILHVENISFPPIESWESFRSDFGDANTFGGPHST 224
Query: 265 TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMG 324
+LK + L++ EK + + V ++++WLD V+ K ++L+G+ ++ P FV G
Sbjct: 225 SLKMSEKLQV--FEKNNEDGIIVFIAELWLDFPNVLQKFRMILEGY--MDYPPIAFVLCG 280
Query: 325 NFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCAL 384
+F S P N++ S +L F L ++I + +KE S+F+F+PGP D G +LP+ L
Sbjct: 281 HFLSFPTNMT--SIQALITGFRDLVKIIVQYTNVKETSKFVFVPGPHDLGSPKILPKPPL 338
Query: 385 PKYLTEELQKYIPNAIFSSNPCRLNF 410
PK + +E+ K I NAIF++NPCR+ +
Sbjct: 339 PKCIIDEVTKSISNAIFTTNPCRIQY 364
>gi|268553377|ref|XP_002634674.1| Hypothetical protein CBG19657 [Caenorhabditis briggsae]
Length = 514
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/413 (25%), Positives = 192/413 (46%), Gaps = 39/413 (9%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILS-FVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
R++I K +I + L+ +A+ + F+ D + + +++ + ++ L+SS+I +E
Sbjct: 8 RREIVKTFQIHAFELKKEAVKLCVKLFLEHDKDTRKKWTNKMIELLKKQT-LQSSLISEE 66
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
+ Q ++ D+G N V DAF + + ++ + +
Sbjct: 67 LIRET---FRQCKSKGSQDAGKLLN-----VFDAFSLHAYDFEPELGKMVLRKATPTLAA 118
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
++S+ + R RFLL+ QR +R S +F E S T++S+V V+G
Sbjct: 119 DSSSFSHAARQRFLLVKQRAARCA--SLKNFKFTTCEILSASTKTLKSVV-------VLG 169
Query: 185 VISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
+ + +++EDL+ S+E++ + K F E++I + EG + + +V
Sbjct: 170 INHCFQADCYHIEDLSGSIEVEFKEDTKFHHALFHEHSIAIFEGN-FENSVLKVNEVAMV 228
Query: 244 PLEDRDQSLKLLAGYDFFGGGTLKKEDTL------RLADLEKRAANDMFVILSDIWLDNE 297
P+E + + K L+ + + GG ED + RL + + + LSD++LD+
Sbjct: 229 PVESAETTRKELSSNENWFGG----EDKIAFRCSERLRSALAKQEDTSIIFLSDVFLDDM 284
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
+ M L +L G++ + P V GNFCS P + L F L + +
Sbjct: 285 KTMRALNKLLIGYK--DQPPIAIVLCGNFCSRPRQTD--TIDLLDRGFRYLANQLQQMKK 340
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
E ++F+F+PGPDD VLPR LP L + + I +A F+SNPCR+ F
Sbjct: 341 EYEKTQFIFVPGPDDPF---VLPRPHLPSLLFKHVSPII-SATFASNPCRIQF 389
>gi|320582358|gb|EFW96575.1| Second largest subunit of DNA polymerase II (DNA polymerase
epsilon) [Ogataea parapolymorpha DL-1]
Length = 644
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/354 (26%), Positives = 167/354 (47%), Gaps = 36/354 (10%)
Query: 94 RVIDAFLVPKFRYDSIKKHF----YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
+ +D ++RY+ ++K F G + L+ RF LL R+ R+++
Sbjct: 148 KAVDIKNYRRYRYNHVRKQFDVLSADAGGDKLVLPSTQDAVNLFIQRFHLLKDRLLRNEN 207
Query: 150 FSRPSFDVVNS-------EFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAA 201
F +F VNS E + ++++I++L+G+ G+R+ + G++++ G + L+D
Sbjct: 208 FQPTTFSAVNSFTSNGPKEVENQQVTSIKNLLGRHGQRFFLFGLLTRSALGLWQLQDDTD 267
Query: 202 SVEIDLSKAKITTG-FFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDF 260
S+E+DL + +FTE ++ EG G F V T PP E R+ SL++L DF
Sbjct: 268 SIELDLGQTLFPQNCYFTEGNFIICEGIYSNSGKFYVSTMIHPPAEKRETSLEVLGKMDF 327
Query: 261 ----FGGGTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVL----DGFE 311
G + +L LEK A+ F+ L DI+L + +VM L+ +L + E
Sbjct: 328 NSVYSNSGRIDPVLRSKLLHLEKDLADHKFIFLGGDIYLSDAKVMEGLKKLLGKLNEELE 387
Query: 312 SVEVVPSLFVFMGNFCSHPCNLSFHSFSS-------LRLQFGKLGQMIAAHPRLKEHSRF 364
+ P +F G+F S P + S++S + F L ++ L +F
Sbjct: 388 TGSSTPVALIFNGSFTSRPFTSTQVSYNSQVTSSGEYKSYFDSLASILEPFSELCATCKF 447
Query: 365 LFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
+F+PG +D G ++V P+ LPK L + + + + SNP +L +L
Sbjct: 448 VFVPGDNDPWSSVVTKGSNSVWPKFRLPKIFGNRLTRLVKDIEWCSNPSKLIYL 501
>gi|344233098|gb|EGV64971.1| hypothetical protein CANTEDRAFT_103862 [Candida tenuis ATCC 10573]
Length = 621
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/363 (26%), Positives = 167/363 (46%), Gaps = 46/363 (12%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
RVI+ P + +D +K F G + + +R+ L+ R+SR++ F +
Sbjct: 122 RVINPPEQPNYTFDKQRKQF-GLRGEGKLSNFRDTNIEYFNNRYSLIRDRLSRNEVFQKT 180
Query: 154 SFDVVN---SEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSK 209
++ ++ S+ S EI+ I++++G G+ +++ G++++ G + +ED S+E++L +
Sbjct: 181 NYQSISNIKSKKQSKEITLIKNIIGNNGQSFIIFGLLTKNFRGVYTIEDTTDSIELNLDQ 240
Query: 210 A-KITTGFFTENTIVVAEG------EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG 262
A K+ F+TE + AEG E +GIF V G PP E RD S + DF
Sbjct: 241 AQKMLDAFYTEGMFLTAEGLYSQFNENSPNGIFHVTHLGHPPAERRDISSEHYGNLDFLN 300
Query: 263 -----------GGTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGF 310
+ K+ +L LEK+ + F+IL S+I+LD+ ++M L +
Sbjct: 301 INKENLSNLHHSSKVSKDFRKKLVRLEKQLTDHKFIILGSNIYLDDLKIMKGLRKLFSRL 360
Query: 311 ES-----VEVVPSLFVFMGNFCSHPCNLSFHSFSS------LRLQFGKLGQMIAAHPRLK 359
E E P V G+F S P + S SS + F L +IA P +K
Sbjct: 361 EKDLTEEEEEAPVSLVLTGSFVSKPISSIQSSTSSISNSESYKNNFNNLANLIAEFPTIK 420
Query: 360 EHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEELQKYIPNA--IFSSNPCRL 408
+ IPGP+D ST LP+ ++P L++ +P NP R+
Sbjct: 421 SKVMLVLIPGPNDPWQSTHSLGSSNLNYLPQPSIPSIFLNRLERLLPKGHLKLGWNPVRV 480
Query: 409 NFL 411
N+L
Sbjct: 481 NYL 483
>gi|358338036|dbj|GAA56372.1| DNA polymerase epsilon subunit 2 [Clonorchis sinensis]
Length = 859
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 123/447 (27%), Positives = 190/447 (42%), Gaps = 58/447 (12%)
Query: 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRF-PDAEDEAIDLLLDQFEHESSLKSSIIDK 63
TR + K K+ G L DA ++ + R P + + L+ E+ LK I D
Sbjct: 217 TRADVDKPFKLNGLFLTPDASAYLVHIIQRVDPTKRQKVLRRLI-----ETILKQKIDD- 270
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY--------- 114
R++ L + +A E + ++ + VIDAF VP+F Y K F
Sbjct: 271 ---TRISKALCE-QAVNECKADRNVDNPILFVIDAFEVPRFHYSRTLKKFIPLDNSDLDG 326
Query: 115 QHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFD--VVNSEFGSCEISTIQS 172
Q P + K+ LY +R+ +++Q V R Q FS+ + V + G+ I I+
Sbjct: 327 QWNSLFP--ASSQVKSFLYANRYEVIYQHVLRHQLFSQTAAHGHVDANGSGNYRIRPIEY 384
Query: 173 LVGQTGR---RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM 229
L+ R V+G++ QL +G ++LED V +DL +A G F E +V+ EG
Sbjct: 385 LLASGSRIESAIVLGMLCQLREGIWHLEDPTGIVRLDLKEAVFHEGLFPEGCVVLVEGAY 444
Query: 230 LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTL------KKEDTLRLADLEKRAAN 283
D I V+ G PP E D S + + + FGGG + RL + A+
Sbjct: 445 -EDQILHVMGMGLPPCEMSDASRRAFSVSNPFGGGLAGAVAAPQDPKMHRLLMTTQAGAD 503
Query: 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCS-----HPCNLSFHSF 338
M V+L + LD + + +L + G+ + P FV GNF S C
Sbjct: 504 AMLVLLGETRLDQGDCLERLSTLFTGYSACP--PVAFVLTGNFLSPDSNGRSCGERLSCL 561
Query: 339 SSLRLQFGKLGQMIAAHPRL-----KEHSRFLFIPGPDD--AGPSTVLPRCALPKYLTEE 391
SL Q L +A P + + + IPGPDD PS +LP+ P L E
Sbjct: 562 RSLLHQL--LSIYKSAFPEIDSLGPSQSPHLILIPGPDDPVCKPSHLLPKRGFPAELIVE 619
Query: 392 -------LQKYIPNAI-FSSNPCRLNF 410
+ P+ + +SNPCR+
Sbjct: 620 FLGRRADMAVECPSWLHLASNPCRIRL 646
>gi|406606007|emb|CCH42644.1| DNA polymerase epsilon subunit B [Wickerhamomyces ciferrii]
Length = 646
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/361 (23%), Positives = 174/361 (48%), Gaps = 19/361 (5%)
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
D+E++N TS + + + R+IDAF P F Y+ +K +
Sbjct: 147 DEEAINNRTSP--PTSISPQPIRNTIDWREYFRIIDAFQQPLFDYNHHRKQYEPSKTKDS 204
Query: 122 IHGEAS--AKAALYRDRFLLLFQRVSRDQHFSRPSFD----VVNSEFGSCEISTIQSLVG 175
S A L++ RF ++ R+ R+++F SF+ V N + G+ I+ +++L+G
Sbjct: 205 SFQSTSIDANIGLFQKRFHIVKDRLLRNENFQSNSFNAFSSVANDQDGTNSITQVKNLLG 264
Query: 176 QTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDGI 234
+ +R+++ + L +G +YL+D + +++D+++A G ++ +V+ +G + +G
Sbjct: 265 RNNQRFMLFGMLTLMNGEWYLQDNSDKIQLDINQADPNLGSYYVPGNMVLCDG-IHSNGK 323
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFG---GGTLKKEDTLRLADLEKRAANDMFVILSD 291
F + G PP E R +L+ + DF G + +E RL LE+ + + ++ ++
Sbjct: 324 FYCSSIGHPPGERRTDTLEAIGNLDFLGIHANMRIDRELHTRLKLLERELDHKIIILGAN 383
Query: 292 IWLDNEEVMGKLEVVLDGF-ESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQ 350
+LD+ + + L + E +P +F G+F S P + S + +L F L
Sbjct: 384 CYLDDLKTLDALTKLFTRLSEDENDLPISIIFNGSFTSSPKHTS--EYKNL---FDSLAS 438
Query: 351 MIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
++ P + +FIPG +D + + P+ +PK + + + +SSNP R+ +
Sbjct: 439 ILEKFPVISGRINLVFIPGENDLWQAPLWPKHPIPKLFGNRITRVARSVNWSSNPTRMVY 498
Query: 411 L 411
L
Sbjct: 499 L 499
>gi|294936255|ref|XP_002781681.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
gi|239892603|gb|EER13476.1| dimethyladenosine transferase, putative [Perkinsus marinus ATCC
50983]
Length = 913
Score = 114 bits (286), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 135/260 (51%), Gaps = 24/260 (9%)
Query: 167 ISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFT-ENTIVVA 225
I+ +++L G G ++V G++S+ +G +ED+ +V++D S+ ++ + + V+
Sbjct: 163 ITAVENLPGNAGVKFVFGLLSRASEGSLQIEDIHQNVKLDFSQCVPSSELIVVDASFVLL 222
Query: 226 EGEM--LVDGIFQVITCGFPPLEDR---DQSLKLLAGYDFFGGGTLKKEDTLRLADLE-- 278
+GEM L DGIF V+ PP R D ++ D FG + LE
Sbjct: 223 KGEMSDLGDGIFHVLEMKMPPKISRKFCDPTI------DIFGATARDNQLGNHTGLLEIS 276
Query: 279 -------KRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV-EVVPSLFVFMGNFCSHP 330
+ A + M V++ ++ LD+++ + KL +L GFE + + P+++VFMGNF P
Sbjct: 277 EIGQPGLESAEDLMVVVMGEVHLDDDDTLEKLADILFGFERMDQPPPAVYVFMGNFTKKP 336
Query: 331 CNL-SFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYL 388
N+ S S R + +L + + +P+ +S+ +F+PGPDD AG +LP AL YL
Sbjct: 337 VNMKSAKSVRDYRACWARLSEELEQYPKTMANSQLVFVPGPDDPAGIGGLLPIPALGDYL 396
Query: 389 TEELQKYIPNAIFSSNPCRL 408
TE + K SNP R+
Sbjct: 397 TERIAKKFKGVHMCSNPVRI 416
>gi|255710439|ref|XP_002551503.1| KLTH0A00924p [Lachancea thermotolerans]
gi|238932880|emb|CAR21061.1| KLTH0A00924p [Lachancea thermotolerans CBS 6340]
Length = 696
Score = 114 bits (285), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 111/438 (25%), Positives = 194/438 (44%), Gaps = 62/438 (14%)
Query: 20 LRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQA--- 76
+R LD L+ NR P A ++ I L SS++ + VT V +A
Sbjct: 112 VRPKTLDNFLA--NRQPSAAEQNI------------LPSSLVAPDVDQDVTDVTEEAQRM 157
Query: 77 ---EAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF-YQHAGSLPIHGEASAKAAL 132
E A DSG ++IDAF F YD + + + + + +A + A+
Sbjct: 158 EVDEPALPTDSGDLDWQDHFKIIDAFAQQNFIYDHTTRQYRLKGQRARKVIPQAESNVAM 217
Query: 133 YRDRFLLLFQRVSRDQHFSR--PSFDVVNSEFG------------SCEISTIQSLVGQTG 178
+ +R+ ++ RV R+ F +F+ ++S G + I+ I++L+G+ G
Sbjct: 218 FANRYHVVKDRVMRNDLFQGHGDTFNPLSSIAGPMSSGPGSFSSQNMTITQIKNLLGRDG 277
Query: 179 RRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDG-IF 235
R +++ G++ G + LED + SVE+DLS+A T G F+ I++AEG G F
Sbjct: 278 RSFLLLGLLRPNYKGGWSLEDPSGSVEVDLSQAIPTVGTFYVSGCILLAEGIYFSAGHKF 337
Query: 236 QVITCGFPPLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMF 286
V + PP E R+ ++ + D G + K+ +R+ LE+ + F
Sbjct: 338 HVASLAHPPGERREATMDAIGNLDLLGVHQQSSPNYISRIDKDLKIRMHLLERELTDHRF 397
Query: 287 VIL-SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP-----CNLSFHSFSS 340
L D++LD +++ L V E P++ V G+F S P + + + S+
Sbjct: 398 AFLGGDLFLDQPQILEALRKVFAKLEGDP--PTMMVLQGSFSSAPLFPVMSSKNISATSA 455
Query: 341 LRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST-------VLPRCALPKYLTEELQ 393
+ F L ++ RL + F+FIPG +D ST V P+ +P + +
Sbjct: 456 YKNNFDALALLLLNFERLINETTFVFIPGNNDPWSSTVSLGTAGVWPQKPIPGIFAQRIN 515
Query: 394 KYIPNAIFSSNPCRLNFL 411
+ + SNP R+ +L
Sbjct: 516 RVCKKIHWGSNPTRVAYL 533
>gi|239610748|gb|EEQ87735.1| DNA polymerase epsilon subunit B [Ajellomyces dermatitidis ER-3]
gi|327348810|gb|EGE77667.1| DNA polymerase epsilon subunit B [Ajellomyces dermatitidis ATCC
18188]
Length = 747
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 108/414 (26%), Positives = 186/414 (44%), Gaps = 83/414 (20%)
Query: 82 GDSGSASN-HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLL 140
GD G+ S+ I+++ AF + Y+ KK+F + S +A + RDR+ L+
Sbjct: 155 GDDGALSDTRRWIKILSAFEQNRPVYNISKKNFDIITTPPSLFPPPSQRANILRDRYNLI 214
Query: 141 FQRVSRDQHFSRP---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYL 196
+QR+ R++ F P S V+S S ++++I +L+G+TG ++G++S G L
Sbjct: 215 YQRLLRNETFQIPLQGSTSSVSSMQRSYKLTSIANLLGRTGTSHLLLGLLSMSPAGDLSL 274
Query: 197 EDLAASVEIDLSKAKITT---GFFTENTIVVAEG----EMLVDGI--------------- 234
D S+ +D++ A+ +F IV+ +G E ++ G
Sbjct: 275 TDPTGSITLDITHAQAVPEDGAWFAPGMIVLVDGIYREEEVISGSTLNGSSGIGGTIGGK 334
Query: 235 FQVITCGFPPLEDRDQSLKLLAGY----------------DFFGGGTLKKEDTLRLADLE 278
F V + G PP E R+ S AG+ DF G G+ ++ R+ +E
Sbjct: 335 FTVASVGGPPCERREASTG--AGHRVEDGGRAVEGGFGWVDFLGVGS-ERSKGYRMRQIE 391
Query: 279 K-----------RAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGN 325
K + V++S++ LD + G L V + + S+ E +P +F+ +GN
Sbjct: 392 KICLRKGQPNEQQDIRKRIVVMSEVNLDVPKTEGALTHVFESYASLPEEQMPLVFILIGN 451
Query: 326 FCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPS 376
F H S S+ + F L +++ +PRL +++ F+F+PG +D AG S
Sbjct: 452 FVQHAIISGGGSAGSIECKEYFDILASILSNYPRLLQNATFVFVPGDNDPWASAYSAGSS 511
Query: 377 TVLPRCALPKYLTEELQKYIPN---------------AIFSSNPCRLNFLITVQ 415
T PR A+P T +++ N AI+SSNP RL+ V
Sbjct: 512 TTAPRDAIPDLFTSRVKRAFTNANSEVPARTKSTPGQAIWSSNPARLSLFGPVH 565
>gi|37362708|ref|NP_015501.2| Dpb2p [Saccharomyces cerevisiae S288c]
gi|85681935|sp|P24482.3|DPB2_YEAST RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|285815700|tpg|DAA11592.1| TPA: Dpb2p [Saccharomyces cerevisiae S288c]
Length = 689
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 171 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 227
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 228 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 288 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 347
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 348 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 407
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 408 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDAL 465
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 466 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVW 525
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 526 SSNPTRIAYL 535
>gi|786319|gb|AAB68109.1| Dpb2p: DNA Polymerase epsilon, subunit B [Saccharomyces cerevisiae]
Length = 692
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 174 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 230
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 231 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 290
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 291 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 350
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 351 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 410
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 411 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQFKNNFDAL 468
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 469 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVW 528
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 529 SSNPTRIAYL 538
>gi|256070995|ref|XP_002571827.1| DNA polymerase epsilon subunit B [Schistosoma mansoni]
Length = 637
Score = 112 bits (279), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 119/443 (26%), Positives = 191/443 (43%), Gaps = 57/443 (12%)
Query: 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRF-PDAEDEAIDLLLDQFEHESSLKSSIIDK 63
++ I K K+ G L DA ILS V R P + + L+ E+ LK I +
Sbjct: 19 SKSDIDKPFKLNGLFLAPDASQYILSIVQRVDPGKRQKVLRKLV-----ETILKQKIDN- 72
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS---- 119
NR++ L +A A E + ++++ + VIDAF VP FR+ K F +
Sbjct: 73 ---NRISKALCEA-AVKECRAEHSTDNIVLYVIDAFSVPYFRFSKPLKKFVPFVPADSSE 128
Query: 120 ----LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG 175
P+ +A KA LY R+ +++QR+ R Q FS+ + + S + + I+ L+
Sbjct: 129 NRLIFPVSPDA--KAFLYAHRYEVIYQRILRHQLFSQ-TAALDGSHSTNYRLRQIEYLLA 185
Query: 176 QTGR---RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232
R V+G+ISQL +G +Y ED + V+++L +A G E +I + EG +
Sbjct: 186 SGSRIDSTVVLGLISQLREGKWYAEDPSGIVQLNLQQAVFHEGLLPEGSIALIEG-FYDE 244
Query: 233 GIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL---------RLADLEKRAAN 283
I V G PP E + S + + + FGG D+L +L + ++
Sbjct: 245 KILYVTGIGLPPCEPPEISRRAFSVGNPFGG--CDTSDSLAASLDTKMHKLLTTTQAGSD 302
Query: 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNF---------CSHPCNLS 334
M VIL + LD + + +L + G+ + P F+ GNF C+ +
Sbjct: 303 AMLVILGETNLDRPDTLDQLTTLFSGYST--CAPVAFILSGNFLSADSIGKTCTERRLIL 360
Query: 335 FHSFSSLRLQF-GKLGQMIAAHPRLKEHS-RFLFIPGPDDA--GPSTVLPRCALPKYLTE 390
L F + H S + + IPGP+D P +LPR L L
Sbjct: 361 RRLLRQLITIFKNNFPDSESQHTSQSNQSPKLILIPGPEDPVYAPKHILPRPGLGIDLIS 420
Query: 391 ELQ-----KYIPNAIFSSNPCRL 408
+ + P +SNPCRL
Sbjct: 421 DNKDRSSSSCPPWLHLASNPCRL 443
>gi|151942946|gb|EDN61292.1| DNA polymerase epsilon subunit B [Saccharomyces cerevisiae YJM789]
gi|349581973|dbj|GAA27130.1| K7_Dpb2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 689
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 171 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 227
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 228 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 288 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 347
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 348 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 407
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 408 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 465
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 466 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVW 525
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 526 SSNPTRIAYL 535
>gi|259150332|emb|CAY87135.1| Dpb2p [Saccharomyces cerevisiae EC1118]
Length = 689
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 171 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 227
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 228 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 288 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 347
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 348 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 407
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 408 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 465
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 466 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVW 525
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 526 SSNPTRIAYL 535
>gi|406860719|gb|EKD13776.1| DNA polymerase alpha/epsilon subunit B [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 805
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 110/456 (24%), Positives = 188/456 (41%), Gaps = 109/456 (23%)
Query: 46 LLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFR 105
LL + + +SS S +D ES + D G ++VIDAF P+
Sbjct: 184 LLTREDSQSSFGMSNLDVES--------------QDDDEGLRDPRKWLKVIDAFEQPRLV 229
Query: 106 YDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFD--------- 156
Y+ KKHF + + +AS K ++R+R+ L+ QR+ R++ F P+F+
Sbjct: 230 YNVAKKHFDRDTSKPSLLPQASHKTQVFRNRYNLIQQRLLRNESFQTPTFEASKASSKRS 289
Query: 157 --VVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKIT 213
+ + + +++ I +L+G+ G ++G+++ G + DL+ S+ +DL+ AK
Sbjct: 290 SSRLATTQQAYKLTPISNLLGRNGTSHMLLGLLTISPTGTLAINDLSGSIALDLTHAKPI 349
Query: 214 T---GFFTENTIVVAEGEMLVD-----------------------GIFQVITCGFPPLED 247
+F IV+ +G D G F G PP E
Sbjct: 350 PEDGAWFAPGMIVIVDGTYEEDDNNSGGGLGGGGGVGGTIGGKFVGFF----IGGPPCER 405
Query: 248 RDQSLKLLAG--------------YDFFGGGTLKKEDTLRLADLEKR-----------AA 282
R +L L DF G G+ + + ++ LE+R
Sbjct: 406 RKVTLGLTGADGEGGLTAGGGFGWVDFLGVGSERAVGS-KMRKLEQRLLRPSSVEDALGG 464
Query: 283 NDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSHPCNLSFHSFSS 340
+I+ ++ LD + L+ +L + E E P FV MGNF H S S
Sbjct: 465 KGRMIIMGEVNLDQPRTLQALKKLLTLYASEPEEDTPMTFVLMGNFVQHAVMARGGSGGS 524
Query: 341 LRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEE 391
+ + F L Q ++ +P L + + F+F+PG +D AG +T LPR ++P T
Sbjct: 525 IEYKEYFDGLAQTLSDYPTLLQSATFIFVPGDNDGWASSFSAGAATPLPRKSVPDMFTSR 584
Query: 392 LQKYIPN----------------AIFSSNPCRLNFL 411
+++ AI++SNP RL+ L
Sbjct: 585 IKRAFATANAEAEKERGKKTDGEAIWTSNPSRLSLL 620
>gi|392296178|gb|EIW07281.1| Dpb2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 689
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 171 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 227
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 228 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 288 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 347
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 348 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 407
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 408 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 465
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 466 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVW 525
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 526 SSNPTRIAYL 535
>gi|330933680|ref|XP_003304251.1| hypothetical protein PTT_16781 [Pyrenophora teres f. teres 0-1]
gi|311319228|gb|EFQ87650.1| hypothetical protein PTT_16781 [Pyrenophora teres f. teres 0-1]
Length = 775
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 109/400 (27%), Positives = 165/400 (41%), Gaps = 85/400 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
I+VI AF PK Y+ +KHF + A + S K L+R R+ ++ QR+ R++ F
Sbjct: 205 IKVIGAFEQPKLIYNFTQKHFEKSATRPSLFPNPSHKTELFRQRYHIVHQRILRNETFQA 264
Query: 153 PSFDVVNS----EFGSC------EISTIQSLVGQTGR-RWVMGVISQLEDGHFYLEDLAA 201
P+F S GS I+ I +L+G+TG ++G+++ G L DL
Sbjct: 265 PTFSTARSSTLNRTGSIATSQMNSITPIANLLGRTGSTHLLLGMLTISATGALSLSDLTG 324
Query: 202 SVEIDLSKAKI---TTGFFTENTIVVAEGEMLVDG------------------IFQVITC 240
++ +D+ A+ +F IV+ EG DG F +
Sbjct: 325 TITLDIQHARPIPENGAYFAPGMIVLVEGSYEEDGGTTSTLGGSGGIGGTIGGKFLAFSV 384
Query: 241 GFPPLEDRDQSL--------KLLAG-----YDFFGGGTLKKEDT------LRLADLEKRA 281
G PP E R +L LAG DF G G+ + T +L D E A
Sbjct: 385 GHPPCERRTATLGGTEEVDKNSLAGPAFGWTDFLGVGSQRATGTRMNKIAAKLLD-EDHA 443
Query: 282 ANDMFVILSDIWLDNEEVMGKLEVVL-----DGFESVEVVPSLFVFMGNFCSHPCNLSFH 336
N VI SD+ LD + L +L D ++ V P + MGNF S
Sbjct: 444 HN--VVIASDLHLDVPSTLSALRTLLRTYTPDPTDTHPVYPLAIILMGNFSSKASLAGVP 501
Query: 337 SFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS-------TVLPRCALPKY 387
SS+ + F L ++A L H+ + +PG +DA PS T LPR +P
Sbjct: 502 GTSSIEYKEHFDALASVLADFQPLIAHTTLILVPGDNDAWPSAFSAGAATPLPRKPIPTM 561
Query: 388 LTEELQKYIPNA-----------------IFSSNPCRLNF 410
T ++K + A I++SNP RL++
Sbjct: 562 FTSRIRKVVAEANREIWGAGKAKGKEGEVIWTSNPSRLSW 601
>gi|323346041|gb|EGA80332.1| Dpb2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 692
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 174 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 230
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 231 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 290
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 291 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 350
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 351 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 410
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 411 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 468
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 469 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCXNVVW 528
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 529 SSNPTRIAYL 538
>gi|171412|gb|AAA34576.1| DNA polymerase II subunit-B [Saccharomyces cerevisiae]
Length = 698
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 180 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 236
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 237 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 296
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 297 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 356
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 357 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 416
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 417 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 474
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 475 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCRNVVW 534
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 535 SSNPTRIAYL 544
>gi|190408098|gb|EDV11363.1| DNA polymerase epsilon subunit B [Saccharomyces cerevisiae RM11-1a]
Length = 689
Score = 111 bits (277), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 171 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 227
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 228 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 288 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 347
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 348 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 407
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 408 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 465
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 466 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCRNVVW 525
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 526 SSNPTRIAYL 535
>gi|207340212|gb|EDZ68632.1| YPR175Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 692
Score = 111 bits (277), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 174 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 230
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 231 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 290
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 291 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 350
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 351 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 410
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 411 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 468
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 469 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCRNVVW 528
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 529 SSNPTRIAYL 538
>gi|156846679|ref|XP_001646226.1| hypothetical protein Kpol_1013p40 [Vanderwaltozyma polyspora DSM
70294]
gi|156116900|gb|EDO18368.1| hypothetical protein Kpol_1013p40 [Vanderwaltozyma polyspora DSM
70294]
Length = 739
Score = 110 bits (276), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 86/327 (26%), Positives = 156/327 (47%), Gaps = 42/327 (12%)
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSF-----------DVVNSEFGSC----EIST 169
+ +K +++ R+ L+ R+ R++ F + + +NS S ++
Sbjct: 255 DVDSKISIFPTRYNLIRDRIMRNEAFQNDTNFNPLSSMISMKNAMNSNENSIASGMSLTL 314
Query: 170 IQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEG 227
I++L+G+ G+ +++ G+I + G + LED + VEIDL++A T+G ++ IV+ EG
Sbjct: 315 IKNLLGRNGKNFLLLGLIKKNSKGKWALEDTSGVVEIDLTQAIPTSGVYYVPGCIVLVEG 374
Query: 228 EMLVDG-IFQVITCGFPPLEDRDQSLKLLAGYDFFG------GGTLKKEDT---LRLADL 277
F V + PP E R+ +L+ + D G + K D+ LRL L
Sbjct: 375 IYFTSANTFHVSSITHPPAEKREITLEAIGNIDLLGVHGISTPNYIAKLDSNLKLRLHFL 434
Query: 278 EKRAANDMFVILS-DIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLS-- 334
EK + F+IL D++LD+ + L + + P++ +F G+F S P + S
Sbjct: 435 EKELIDHKFLILGGDLFLDDMNTISALRKLFTKIN--DDPPTVIIFQGSFSSTPVHASTQ 492
Query: 335 ---FHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCAL 384
S S + F L +++ L E S +FIPG +D G + + P+ ++
Sbjct: 493 NNGISSTSRYKNGFDTLATLLSQFDYLTESSTMIFIPGANDPWSSMVSLGATRIWPQKSI 552
Query: 385 PKYLTEELQKYIPNAIFSSNPCRLNFL 411
P Y T+ + + N I+ SNP R+ +L
Sbjct: 553 PNYFTQRINRVCKNVIWGSNPTRIAYL 579
>gi|429851931|gb|ELA27088.1| DNA polymerase epsilon subunit [Colletotrichum gloeosporioides Nara
gc5]
Length = 796
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 103/401 (25%), Positives = 169/401 (42%), Gaps = 91/401 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFS- 151
++VIDA+ P+F Y+ KKHF + + AS K AL+R+R+ ++ QR+ R++ F
Sbjct: 224 LKVIDAYEQPRFSYNVAKKHFERETSKPSLLPSASHKTALFRNRYNVIHQRLLRNESFQT 283
Query: 152 -------RPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
PS S + +I+ I +++G+ G ++G+++ L G + DL A++
Sbjct: 284 SAVASARTPSLKRSLSNQQNHKITPIANMLGRHGSHHMLLGMLNVLPAGGLAISDLTATI 343
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+DLS+A + +FT IV LVDG+ F
Sbjct: 344 ALDLSQAVAIPEDSAWFTPGMIV------LVDGVYEEEEESVGKGLSGSSGVGGTLGGRF 397
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR- 280
Q G PP E R +L + DF G G+ ++ R+ LE+R
Sbjct: 398 QGFFIGQPPCEKRKATLGVSGPDGGQDHTIGGGFGWIDFLGVGS-ERAVGARMRKLEQRL 456
Query: 281 ---------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSH 329
+ +IL ++ LD + + +L + E P F+ GNF H
Sbjct: 457 LPRHSAEEVPSRGRMIILGEVNLDQPRTLQAMRKILALYAAEPEGSSPMTFIVTGNFTQH 516
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L ++ +P L + S F+F+PG +D AG +T LP
Sbjct: 517 AVLARGGSGGSIEYKEYFDALASTLSDYPTLLQSSTFVFVPGDNDGWVSSFTAGAATPLP 576
Query: 381 RCALPKYLTEELQKYIP------------NAIFSSNPCRLN 409
R A P T +++ AI++SNP RL
Sbjct: 577 RKAAPDVFTSRIRRAFAAANAELGAKGDGEAIWTSNPSRLT 617
>gi|50421789|ref|XP_459452.1| DEHA2E02838p [Debaryomyces hansenii CBS767]
gi|74602230|sp|Q6BQR8.1|DPB2_DEBHA RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|49655120|emb|CAG87668.1| DEHA2E02838p [Debaryomyces hansenii CBS767]
Length = 669
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 179/382 (46%), Gaps = 70/382 (18%)
Query: 94 RVIDAFLVPKFRYDSIKKH--FYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFS 151
+VI+ P ++YD +K F + + ++ + +R+ L+ R+SR+++F
Sbjct: 141 KVINPDEQPNYKYDKHRKQLSFIPSTNAKRLANNLNSNVDYFNNRYHLISDRLSRNENFQ 200
Query: 152 RPSFDVVNSEF-------GSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASV 203
+PSF ++S + EI+ I++++G+ G ++++ G++S+ + F LED +
Sbjct: 201 KPSFSSISSISKSLSHNNKTNEITLIKNVLGRDGSKFILFGLLSKNANDDFILEDSTDHI 260
Query: 204 EIDLSKAKITTG-FFTENTIVVAEG-----------EMLVDGIFQVITCGFPPLEDRDQS 251
E++L++A T G F+ V+ EG ++ G F V G PP E R+ S
Sbjct: 261 ELNLTQAYKTEGSFYCPGMFVIVEGIYSASGGSMSNANVIGGCFHVSNIGHPPAERRELS 320
Query: 252 LKLLAGYDFFG-----------------GGTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
++ DF G +LKK +L LEK N +IL SD +
Sbjct: 321 MENYGNLDFMGINRDNDTNNNDNHILRVNKSLKK----KLVSLEKTLVNHKLIILGSDCF 376
Query: 294 LDNEEVM-------GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSL----- 341
LD+ +++ GK+E L E+ + P + V +G+F S+P + S +++
Sbjct: 377 LDDLKILDGIKKLFGKIESSLIDDETNQ--PLVIVLIGSFTSNPLTPTNSSVANVSNTEN 434
Query: 342 -RLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEE 391
+ F L +++ P + + + IPG +D S+ P+ ++PK T
Sbjct: 435 YKSNFDNLSNILSNFPNIVQKVKIALIPGINDPWQSSHSLGGSNLNAFPQRSIPKIFTNR 494
Query: 392 LQKYIP--NAIFSSNPCRLNFL 411
L++ +P N I NP R+N+L
Sbjct: 495 LERLLPKGNLIAGWNPLRINYL 516
>gi|365762630|gb|EHN04164.1| Dpb2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 692
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 100/370 (27%), Positives = 177/370 (47%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K + R+ L
Sbjct: 174 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMXLTRYYLTND 230
Query: 143 RVSRDQHFSRPS-FDVVNS---------------EFGSCEISTIQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S + S I+ I++L+G+ + +++ G+
Sbjct: 231 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSITPIKNLLGRDAQNFLLLGL 290
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 291 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 350
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 351 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 410
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + PSL ++ G+F S P + + S + + F L
Sbjct: 411 LDDLKIMTALSKILQKLN--DDPPSLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 468
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 469 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCXNVVW 528
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 529 SSNPTRIAYL 538
>gi|398396444|ref|XP_003851680.1| hypothetical protein MYCGRDRAFT_86683 [Zymoseptoria tritici IPO323]
gi|339471560|gb|EGP86656.1| hypothetical protein MYCGRDRAFT_86683 [Zymoseptoria tritici IPO323]
Length = 782
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 170/412 (41%), Gaps = 99/412 (24%)
Query: 90 HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
S ++V+ AF P+F YD KKHF + + S K ++++R+ ++ QR+ R+
Sbjct: 202 RSWLKVVSAFDQPRFTYDVDKKHFLSISTKPSMFPSPSHKTRVFKERYNIIQQRLRRNPI 261
Query: 150 FSRPSF--------------DVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHF 194
F PSF D EF +++ I +L+G+ G ++G++ G
Sbjct: 262 FQAPSFSAGQNNGVVRRKGKDAAAREF--YKLTPIANLLGRGGSSHTLLGMLVIAPTGTL 319
Query: 195 YLEDLAASVEIDLSKA-----KITTGFFTENTIVVAEGEMLVDGIFQV------------ 237
L DL+ S+ +DL A ++ +F IV LVDG+++
Sbjct: 320 ALNDLSGSISLDLQHATPIGGSVSDAYFCPGMIV------LVDGVYEEDWAGAGSSGLGN 373
Query: 238 --------------ITCGFPPLEDRDQSLKL----------LAGYDFFGGGTLKKEDTLR 273
G PP+E RD SL + DF G G+ + R
Sbjct: 374 TGGVGGSIGGRFVGFEIGGPPVEKRDVSLGINLASGDQGGGFGWIDFLGQGS-DRAVGAR 432
Query: 274 LADLEKR----------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFM 323
+ LE+R + VILS++ LD + L VL+ + + E P F+
Sbjct: 433 MKKLERRLMGPEAETNTTTSQKTVILSEVTLDQPSTLVALRKVLEQYATAEQPPMAFILT 492
Query: 324 GNFCSHPCNLSFHSFS-SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGP 375
G+F S + S + F +L ++A P L S ++F+PG +D AG
Sbjct: 493 GDFSSKAVMAGAGTGSIEYKELFNELAALLADFPTLLRSSTWIFVPGDNDPWASSFSAGA 552
Query: 376 STVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLNFL 411
ST++PR +P+ T +++ AI++SNP RL+
Sbjct: 553 STLIPREGVPELFTNRIRRAFATAKTELGAAKKGEVDGEAIWTSNPARLSLF 604
>gi|452981196|gb|EME80956.1| hypothetical protein MYCFIDRAFT_28309 [Pseudocercospora fijiensis
CIRAD86]
Length = 788
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/442 (24%), Positives = 183/442 (41%), Gaps = 98/442 (22%)
Query: 60 IIDKESVNR------VTSVLLQAEAAA--EGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
I D+ S+ R ++ + +Q+ A E + S +++I AF P+F Y KK
Sbjct: 165 IADRPSLERQGSSFGISGLRVQSPTAQDEEPEGSQRDPRSWLKIISAFEQPRFTYSVDKK 224
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSC------ 165
HF + + K AL ++R+ ++ QR+ R+ F PSF +
Sbjct: 225 HFLRLENKPALFPNTKQKTALIKERYNIIHQRLLRNPAFQAPSFSAQTASLRRSNTVTER 284
Query: 166 ---EISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKA---KITTGFFT 218
+I+ I +L+G+ G ++G++ G L DL+ S+ +DL A + +F
Sbjct: 285 TFYKITPIANLLGRGGTNHLLLGMLVIAPTGTLALNDLSGSISLDLQHATSMQEVQPYFC 344
Query: 219 ENTIVVAEGEMLVDGIFQV--------------------------ITCGFPPLEDRDQSL 252
IV LVDG+++ G PP+E RD SL
Sbjct: 345 PGMIV------LVDGVYEEDWAGAGSSGLGNTGGVGGTIGGRFVGFEIGGPPVERRDISL 398
Query: 253 KL----------LAGYDFFGGGTLKKEDTLRLADLEKR---------AANDMFVILSDIW 293
+ DF G G+ ++ R+ LE+R + V+LS +
Sbjct: 399 GINVKAEEVGGGFGWTDFLGQGS-ERAVGQRMRKLEQRLIGLESDIEESQRKMVVLSQVT 457
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQM 351
LD + L VL+ +E + P FV G+F S ++ S+ + F +L +
Sbjct: 458 LDQPSTLSALRKVLEQYEVADSPPMSFVLCGDF-SRKAAMAGAGTGSIEYKELFNELAAV 516
Query: 352 IAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIPN------ 398
++ P L + ++F+PG +D AG STVLP+ A+P T +++ N
Sbjct: 517 MSDFPNLLRNCTWVFVPGDNDPWASAFSAGASTVLPKEAVPDLFTSRVKRAFANAKQEMG 576
Query: 399 ---------AIFSSNPCRLNFL 411
AI++SNP RL+
Sbjct: 577 VKKPDVEGEAIWTSNPARLSLF 598
>gi|366989367|ref|XP_003674451.1| hypothetical protein NCAS_0A15150 [Naumovozyma castellii CBS 4309]
gi|342300314|emb|CCC68073.1| hypothetical protein NCAS_0A15150 [Naumovozyma castellii CBS 4309]
Length = 715
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 171/369 (46%), Gaps = 58/369 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEAS--------AKAALYRDRFLLLFQRVS 145
+VI+ KF Y++ K F PI+ S ++ R+ L+ RV
Sbjct: 196 KVINVSEQQKFTYNANKMQFQ----FCPINTNTSVIKLPTTQTNVTIFPTRYYLIRDRVM 251
Query: 146 RDQHFSRP-SFDVVNS---------EFGS-------CEISTIQSLVGQTGRRWVM-GVIS 187
R+++F +F+ ++S E G I+ I++L+G+ G +++ G++
Sbjct: 252 RNENFQNDDTFNPLSSMMHLKEELQESGGNVNITSFMSITPIKNLLGRDGMNFLLLGLLK 311
Query: 188 QLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFPPL 245
+ G++ LED + S+EI++S+ T G ++ IV+AEG V F V + PP
Sbjct: 312 KNTRGNWALEDPSGSIEIEISQTIPTKGLYYVPGCIVLAEGIYFSVGNKFHVTSMTHPPG 371
Query: 246 EDRDQSLKLLAGYDFFGGGTLKKED---------TLRLADLEKRAANDMFVILS-DIWLD 295
E R+ +L+ + D G E+ +RL LEK + FVIL D++LD
Sbjct: 372 ERRETTLEAIGNLDLLGVHGASNENYIARLDNDLKIRLHFLEKELEDHRFVILGGDLFLD 431
Query: 296 NEEVMGKLEVVLDGFESVEV-VPSLFVFMGNFCSHPCNLSFHS-----FSSLRLQFGKLG 349
+ LE + F +E P+L +F G+F S P + S S + + F L
Sbjct: 432 E---LATLEALKKTFTKLEEDPPTLLIFQGSFTSVPVHASMTSRNVSATTQYKNNFDTLA 488
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIFS 402
+++ + S +FIPGP+D G + + P+ +P Y T+++ + + I+
Sbjct: 489 GLLSTFENIINGSTLIFIPGPNDPWSSMVSLGATGIFPQKPIPTYFTQKMNRVCKHIIWG 548
Query: 403 SNPCRLNFL 411
SNP R+ +L
Sbjct: 549 SNPTRIAYL 557
>gi|50308319|ref|XP_454161.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74606040|sp|Q6CPH8.1|DPB2_KLULA RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|49643296|emb|CAG99248.1| KLLA0E04775p [Kluyveromyces lactis]
Length = 710
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/372 (25%), Positives = 168/372 (45%), Gaps = 56/372 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGE-----------ASAKAALYRDRFLLLFQ 142
+VIDAF F YD K+ + + +K +L+ R+ ++
Sbjct: 186 KVIDAFNQQTFTYDHTKRQYIYVPRPKEVEKNMLSIAKLKLPNVESKVSLFTTRYHIIKD 245
Query: 143 RVSRDQHFSRPS-FDVVNS--EFGS---------------CEISTIQSLVGQTGRRWVM- 183
+V R++ F F+ ++S E G +I+ I++L+G G+ +++
Sbjct: 246 KVLRNEKFQNNDIFNPLSSIIEMGKHMNESDVSPLNSASYMKITQIKNLLGHDGKNFLLL 305
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEG-EMLVDGIFQVITCG 241
G++ Q G++ LED + S+E+ L +A T G ++ IV+ EG F V +
Sbjct: 306 GLLDQNSKGNWSLEDPSGSIELHLQQAIPTKGTYYVPGCIVLVEGIYYTASNTFVVSSIT 365
Query: 242 FPPLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SD 291
PP E R+ +++ + D G L K+ +RL LE+ +++ FVIL D
Sbjct: 366 HPPGEKREDTIEAIGNLDLLGAYNPSNENYVARLDKDLKIRLHYLEQELSDNKFVILGGD 425
Query: 292 IWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFS-----SLRLQFG 346
I+LD M L+ D + P VF G+F S P + S ++ + S + F
Sbjct: 426 IYLDEMTTMDGLKKTFDKLTTDP--PVAIVFNGSFVSVPVHPSLNAKNVSATVSYKNNFD 483
Query: 347 KLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNA 399
L +++ + L + +FIPGP+D G +T+ P+ +P T+++ +
Sbjct: 484 ALATLLSNYENLINDTHMIFIPGPNDPWTSMVGLGTTTMWPQKIIPSSFTQKMSRICRKV 543
Query: 400 IFSSNPCRLNFL 411
+ SNP R+ +L
Sbjct: 544 HWGSNPLRIAYL 555
>gi|365990674|ref|XP_003672166.1| hypothetical protein NDAI_0J00310 [Naumovozyma dairenensis CBS 421]
gi|343770941|emb|CCD26923.1| hypothetical protein NDAI_0J00310 [Naumovozyma dairenensis CBS 421]
Length = 704
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 169/377 (44%), Gaps = 61/377 (16%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEAS-----------AKAALYRDRFLLLFQ 142
+VI+A +F Y+S+K F G S + +L++ R+ L +
Sbjct: 172 KVINAHDQQRFIYNSMKMQFQFQPNKKKKQGINSNLLHLKLPNILSNISLFQTRYYLNKE 231
Query: 143 RVSRDQHFSRP-SFDVVNSEF----------------------GSCEISTIQSLVGQTGR 179
R+ R+++F SF+ ++S I+ I++L+G+ G+
Sbjct: 232 RIMRNENFQNTDSFNPLSSMIHMKNDLTTTTTTTTTNQTENISSYMSITPIKNLLGRDGK 291
Query: 180 RW-VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQ 236
+ ++G++ + G++ +ED ++S+EI++S+ T G ++ IV+AEG V F
Sbjct: 292 NFLILGLLKKNSKGNWSIEDPSSSIEIEISQTTPTPGVYYVPGCIVLAEGIYFSVGNKFH 351
Query: 237 VITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKED---------TLRLADLEKRAANDMFV 287
VI+ PP E R+ +L + D G + E+ +RL LEK + F+
Sbjct: 352 VISMTLPPAERREITLDAIGNLDLLGMHNISNENYIARLDSDLKIRLHFLEKELEDHRFI 411
Query: 288 IL-SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF-----HSFSSL 341
IL D++LD + L V D + P++ +F G+F S P + S S +
Sbjct: 412 ILGGDLFLDELTTLEALRKVFDKIN--DDPPTIIIFQGSFTSIPIHASMTSRNISSTTQY 469
Query: 342 RLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV-------LPRCALPKYLTEELQK 394
+ F L +++ + + +FIPG +D S V +P+ +P Y + +
Sbjct: 470 KNNFDLLANLLSNYENIINECTLIFIPGVNDPWGSMVSLGATGPIPQNKIPSYFINRMNR 529
Query: 395 YIPNAIFSSNPCRLNFL 411
N I+ SNP R+ +L
Sbjct: 530 ICKNIIWGSNPTRILYL 546
>gi|345564565|gb|EGX47526.1| hypothetical protein AOL_s00083g335 [Arthrobotrys oligospora ATCC
24927]
Length = 806
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/364 (26%), Positives = 165/364 (45%), Gaps = 48/364 (13%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
I V+DAF PK++Y+ +K F + A + +A++KA ++ R+ L+ R+ R+ F
Sbjct: 271 IHVVDAFTQPKYKYNQSRKQF-ERAPKPSLLPDATSKAQVFLTRYYLIHHRLLRNPSFQP 329
Query: 153 PSFDVVNSEFGSC-----EISTIQSLVGQTGRRW-VMGVISQLED-GHFYLEDLAASVEI 205
P+F +S +I+ I L+G++G+ + + G++S D G LED S+++
Sbjct: 330 PTFAPSSSMTSRGTKTYFKITPIAHLLGRSGKPFFIFGLLSTSPDTGQLMLEDPTGSIQL 389
Query: 206 DLSKAKITTG---FFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG 262
D + A+ +F + VV +G DG F T G PP E R+ S ++ DF G
Sbjct: 390 DTTHARPIPEDGVWFCPGSFVVVDGTFEADGRFTAYTIGQPPSERRETSAEVFGHMDFLG 449
Query: 263 GG-----TLKKEDTLRLADLEKRAAND---MFVILSDIWLD---NEEVMGKL----EVVL 307
+ L EKR AN+ ++LS++ LD E + KL E
Sbjct: 450 INMPLEFSAGGGGGRGLRLAEKRLANEGKGKVIVLSEVHLDLPKTHEALTKLFEKWESEA 509
Query: 308 DGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFI 367
+G + VE VP++ + G F S+ + S + I+A L + F+ +
Sbjct: 510 NGEDEVE-VPAVVIMCGRFVSNGFGVGNGSL-GYKEALDTFAVTISAFNTLLTKTIFVLV 567
Query: 368 PGPDD-------AGPSTVLPRCALPKYLTEELQKYIPNA-------------IFSSNPCR 407
P D G S VLPR ++P + +L++ A +F SNPCR
Sbjct: 568 PSDGDPWGAAFTGGASGVLPRKSVPDVFSGKLKRVFTVANSANKKDGGGGRVVFGSNPCR 627
Query: 408 LNFL 411
+ +
Sbjct: 628 VGYF 631
>gi|123976717|ref|XP_001314579.1| DNA polymerase epsilon subunit B family protein [Trichomonas
vaginalis G3]
gi|121897132|gb|EAY02262.1| DNA polymerase epsilon subunit B family protein [Trichomonas
vaginalis G3]
Length = 508
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/356 (25%), Positives = 159/356 (44%), Gaps = 23/356 (6%)
Query: 61 IDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSL 120
+DKE + +V + + + + + H AF PKF +D ++
Sbjct: 56 VDKEIIEKVLTNIQKQNSIS---------HQVFDFQSAFDAPKFEFDMNTQNLVPSTQPK 106
Query: 121 PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRR 180
I G+ +K +LYR+RF +L + + F++ + + + GS I I +LV +
Sbjct: 107 SILGKGPSKISLYRERFQILKYSLINSKAFAKSALKFWSDDDGSLSIVDIATLVSKPHDS 166
Query: 181 WVMGV-ISQLEDGHFYLEDLAASVEIDLS-KAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
V+ + I E + +ED + + + +S + + G IVV +G+ L D + ++
Sbjct: 167 TVVFIGILDYEGEVYTVEDESGVINLAISPECQFFGGILPVGCIVVVQGKALGDYVNALV 226
Query: 239 TCGFPPLEDRDQSLKLLA-GYDFFGGGTLKKEDTLRLAD-LEKRAANDMFVILSDIWLDN 296
P L D K + YD FG L +E L L + N + ++ SD+W+D
Sbjct: 227 IGHPPALTTSDFMNKFWSLPYDPFGWN-LNRESMSNLQSILHEEHENALILVFSDVWIDV 285
Query: 297 EEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA-AH 355
+ + VL ++S P++ + G+F P L F+ F K + I+ H
Sbjct: 286 PSCVTEFSHVLQNYDSSP--PNMIILCGSFTQKP--LPFNGMKQFERDFRKFIKKISDEH 341
Query: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
+ ++S+F+FIP D G V PR + ++ P AIF SNPC++ FL
Sbjct: 342 TAMIQNSKFVFIPSLTDPGAPKVFPRL----LFQDSIKNMFPEAIFMSNPCKIRFL 393
>gi|260950621|ref|XP_002619607.1| hypothetical protein CLUG_00766 [Clavispora lusitaniae ATCC 42720]
gi|238847179|gb|EEQ36643.1| hypothetical protein CLUG_00766 [Clavispora lusitaniae ATCC 42720]
Length = 670
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/382 (24%), Positives = 175/382 (45%), Gaps = 67/382 (17%)
Query: 94 RVIDAFLVPKFRYDSIKKHF-YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
R + + P F++D ++K F Q + + + + R+ L R+SRD++F +
Sbjct: 138 RFVTPDIQPNFKFDKVRKQFALQPVAGSKLKSTYDSSMSYFSQRYNLTLDRLSRDENFHK 197
Query: 153 PSFDVVNSEFGSC------EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEI 205
SF + + S EI+ I++++G+ G R+++ G++S+ +G++ LED + +E+
Sbjct: 198 TSFSSIAALNTSLKKPSGYEITLIKNVLGRDGSRFMLFGLLSKNINGNYILEDTSDYIEL 257
Query: 206 DLSKAKITTG-FFTENTIVVAEG------------EMLVDGIFQVITCGFPPLEDRDQSL 252
++++A T G F+ +V+ EG ++ G F V G PP E R+ L
Sbjct: 258 NMTQAHKTEGSFYCTGMLVIIEGIYSASGGSMSNDASVISGCFHVSNIGHPPAERREIGL 317
Query: 253 KLLAGYDFFG-----------GGTLKKEDTLR--LADLEKRAAN-DMFVILSDIWLDNEE 298
++ DF G +K + LR L+ LEK N + ++ ++ LD+ +
Sbjct: 318 EVYGNLDFMGIHSDALTQTKSSALVKVDKALRRKLSALEKSLVNHKLLLLGCNLHLDDAK 377
Query: 299 VMGKLEVVLDGFESVEVV------------PSLFVFMGNFCSH---PCNLSFHSFSS--- 340
++ L + FE +EV P + G+F S P + + HS SS
Sbjct: 378 IVSGLRKL---FEKLEVTLEEQQDNPQSDKPLAIIMPGSFVSQPLAPISGTVHSASSSEN 434
Query: 341 LRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS---------TVLPRCALPKYLTEE 391
+ F ++++ P + +F+ +PGP+D S LP+ +P
Sbjct: 435 YKNNFDNFAELLSKFPLVVNRCKFVLVPGPNDPWQSAYSLGRLNLNTLPQSPVPNVFVTR 494
Query: 392 LQKYIP--NAIFSSNPCRLNFL 411
L++ +P N I NP R+N++
Sbjct: 495 LERLLPKGNLILGWNPMRINYI 516
>gi|261194964|ref|XP_002623886.1| DNA polymerase epsilon subunit B [Ajellomyces dermatitidis
SLH14081]
gi|239587758|gb|EEQ70401.1| DNA polymerase epsilon subunit B [Ajellomyces dermatitidis
SLH14081]
Length = 747
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 107/414 (25%), Positives = 185/414 (44%), Gaps = 83/414 (20%)
Query: 82 GDSGSASN-HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLL 140
GD G+ S+ I+++ AF + Y+ KK+F + S +A + RDR+ L+
Sbjct: 155 GDDGALSDTRRWIKILSAFEQNRPVYNISKKNFDIITTPPSLFPPPSQRANILRDRYNLI 214
Query: 141 FQRVSRDQHFSRP---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYL 196
+QR+ R++ F P S V+S S ++++I +L+G+TG ++G++S G L
Sbjct: 215 YQRLLRNETFQIPLQGSTSSVSSMQRSYKLTSIANLLGRTGTSHLLLGLLSMSPAGDLSL 274
Query: 197 EDLAASVEIDLSKAKITT---GFFTENTIVVAEG----EMLVDGI--------------- 234
D S+ +D++ A+ +F IV+ +G E ++ G
Sbjct: 275 TDPTGSITLDITHAQAVPEDGAWFAPGMIVLVDGIYREEEVISGSTLNGSSGIGGTIGGK 334
Query: 235 FQVITCGFPPLEDRDQSLKLLAGY----------------DFFGGGTLKKEDTLRLADLE 278
F V + G PP E R+ S AG+ DF G G+ ++ R+ +E
Sbjct: 335 FTVASVGGPPCERREASTG--AGHRVEDGGRAVEGGFGWVDFLGVGS-ERSKGYRMRQIE 391
Query: 279 K-----------RAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGN 325
K + V++S++ LD + G L V + + S+ E +P +F+ +GN
Sbjct: 392 KICLRKGQPNEQQDIRKRIVVMSEVNLDVPKTEGALTHVFESYASLPEEQMPLVFILIGN 451
Query: 326 FCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPS 376
F H S S+ + F L +++ + RL +++ F+F+PG +D AG S
Sbjct: 452 FVQHAIISGGGSAGSIECKEYFDILASILSNYRRLLQNATFVFVPGDNDPWASAYSAGSS 511
Query: 377 TVLPRCALPKYLTEELQKYIPN---------------AIFSSNPCRLNFLITVQ 415
T PR A+P T +++ N AI+SSNP RL+ V
Sbjct: 512 TTAPRDAIPDLFTSRVKRAFTNANSEVPARTKSTPGQAIWSSNPARLSLFGPVH 565
>gi|358367571|dbj|GAA84189.1| DNA polymerase epsilon subunit B [Aspergillus kawachii IFO 4308]
Length = 746
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 106/426 (24%), Positives = 180/426 (42%), Gaps = 89/426 (20%)
Query: 74 LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALY 133
L+ E E + ++VI+AF +P+ Y++ KK+F + +S + L+
Sbjct: 167 LEGEGPTETSDVPSHPRHWVKVIEAFDIPRLTYNADKKYFEVARSRPTLFPPSSHRTNLF 226
Query: 134 RDRFLLLFQRVSRDQHFSRPSFD--VVNSEFGSC------EISTIQSLVGQTG-RRWVMG 184
RDR+ ++ QR+ R + F PS ++ S +++ I +L+G+ G ++G
Sbjct: 227 RDRYNVIHQRLLRHESFQSPSGPSRILRQPSSSLAVTQGYKLTPIANLLGRNGTSHLILG 286
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGE-MLVDGIFQ------- 236
++S G L DL S+ +DL A++ E+ +A G +LVDGI++
Sbjct: 287 LLSTSPTGDLTLSDLTGSISLDLRHARM----VPEDGAWLAPGMFVLVDGIYEEEENVRG 342
Query: 237 -------------------VITCGFPPLEDRDQSLKL--------------LAGYDFFGG 263
V CG PP E R+ SL + L DF G
Sbjct: 343 STLGGNSGVGGAIGGVFVGVSICG-PPCERRETSLGMNNQQSGREVSSSGGLGWIDFLGV 401
Query: 264 GT-------LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--E 314
G+ +++ +T L D+ K V L ++ LDN + L V + + E
Sbjct: 402 GSERARGPRMRQIETNYLRDVAKSERRLRVVALGEVNLDNMRTLDALRKVFSVYHHLPSE 461
Query: 315 VVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD 372
PS+FV GNF S S+ + F L +++ P L +HS F+F+PG +D
Sbjct: 462 ERPSIFVLTGNFVQKAIINSSGQAGSIEYKEHFDALSLILSEFPSLLQHSTFIFVPGDND 521
Query: 373 -------AGPSTVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLN 409
AG ++ +PR ++P+ T +++ AI++SNP RL
Sbjct: 522 PWPSAFSAGAASPVPRHSIPELFTTRVKRAFATANSQSDSSQSSGPPGEAIWTSNPSRLT 581
Query: 410 FLITVQ 415
V
Sbjct: 582 LFGPVH 587
>gi|189210980|ref|XP_001941821.1| DNA polymerase epsilon subunit B [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187977914|gb|EDU44540.1| DNA polymerase epsilon subunit B [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 775
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 163/398 (40%), Gaps = 81/398 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
I+VI AF PK Y+ +KHF + A + S K L+R R+ ++ QR+ R++ F
Sbjct: 205 IKVIGAFEQPKLIYNFTQKHFEKSATKPSLFPNPSHKTELFRQRYHIVHQRILRNETFQA 264
Query: 153 PSFDVVNS----EFGSC------EISTIQSLVGQTGR-RWVMGVISQLEDGHFYLEDLAA 201
P+F S GS I+ I +L+G+TG ++G+++ G L DL
Sbjct: 265 PTFSTARSSTLNRTGSIATSQMNSITPIANLLGRTGSTHLLLGMLTVSATGALSLSDLTG 324
Query: 202 SVEIDLSKAKI---TTGFFTENTIVVAEGEMLVDG------------------IFQVITC 240
++ +D+ A+ +F IV+ EG D F +
Sbjct: 325 TITLDIQHARPIPENGAYFAPGMIVIVEGSYEEDSGTTSTLGGNGGIGGTIGGKFLAFSV 384
Query: 241 GFPPLEDRDQSL--------KLLAG-----YDFFGGGTLKKEDTLRLADLEKRAAND--- 284
G PP E R +L LAG DF G G+ + T R+ + + +
Sbjct: 385 GHPPCERRTATLGGAEEVDKNSLAGPAFGWTDFLGVGSQRATGT-RMNKIAAKLLDPDHA 443
Query: 285 -MFVILSDIWLDNEEVMGKLEVVL-----DGFESVEVVPSLFVFMGNFCSHPCNLSFHSF 338
VI SD+ LD + L +L D ++ V P + MGNF S
Sbjct: 444 HNVVIASDLHLDVPSTLSALRTLLRTYTPDPTDAHPVYPLAIILMGNFSSKASLAGVPGT 503
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS-------TVLPRCALPKYLT 389
SS+ + F L ++A L H+ + +PG +DA PS T LPR +P T
Sbjct: 504 SSIEYKEHFDALASVLADFQPLIAHTTLVLVPGDNDAWPSAFSAGAATPLPRKQIPTMFT 563
Query: 390 EELQKYIPNA-----------------IFSSNPCRLNF 410
++K + A I++SNP RL++
Sbjct: 564 SRIRKVVAEANREIWGAGKAKGKEGEVIWTSNPSRLSW 601
>gi|156055730|ref|XP_001593789.1| hypothetical protein SS1G_05217 [Sclerotinia sclerotiorum 1980]
gi|154703001|gb|EDO02740.1| hypothetical protein SS1G_05217 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 782
Score = 108 bits (269), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 168/405 (41%), Gaps = 87/405 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VIDAF P+ Y+ KKHF + + AS K ++++R+ ++ QR+ R++ F
Sbjct: 219 LKVIDAFEQPRLIYNVAKKHFDRDTSKPSLFPPASHKTLMFQNRYNVIHQRLLRNESFQT 278
Query: 153 PSF-----------DVVNSEFGSCEISTIQSLVGQT-GRRWVMGVISQLEDGHFYLEDLA 200
PSF + S S +++ I +L+G+ ++G++S G + DL
Sbjct: 279 PSFQGGKASLQRSTSAIASPQQSYKLTPIANLLGRNRSNHMLLGLLSISPTGTLAINDLT 338
Query: 201 ASVEIDLSKAKITT---GFFTENTIVVAEGE-------------------MLVDGIFQVI 238
++ +DL+ AK +F IV+ +G + G F
Sbjct: 339 GTIALDLTHAKAIPEDGAWFVPGMIVLVDGTYEEDETGSSSRLGGNGGVGGTISGKFIGF 398
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL----------RLADLEKR-------- 280
T G PP E R +L D GG D L ++ LE++
Sbjct: 399 TIGHPPPERRHVTLSTAGEGDTTAGGGFGWVDFLGVGSSRALGTKMQRLEQKLLRPPPRS 458
Query: 281 --------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNFCSHP 330
+ VIL D+ LD + + L+ +L + S P F+ +G+F SH
Sbjct: 459 SDTDEPPLPSKGRVVILGDVHLDIPQTLQALKKILSLYSSEPEGCTPMTFILLGSFVSHA 518
Query: 331 CNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPR 381
S S+ + F L +++ +P L + F+FIPGP+DA G S LPR
Sbjct: 519 VLSRGGSGGSIEYKEYFDSLAAVLSEYPTLLSTATFIFIPGPNDAWVSAFSSGSSVPLPR 578
Query: 382 CALPKYLT----------------EELQKYIPNAIFSSNPCRLNF 410
+P+ T E+ +K AI++SNP R++
Sbjct: 579 KPVPEMFTSRIIRAFASANTEVEKEKGKKGDGEAIWTSNPARVSL 623
>gi|389594695|ref|XP_003722570.1| putative DNA polymerase epsilon subunit b [Leishmania major strain
Friedlin]
gi|323363798|emb|CBZ12804.1| putative DNA polymerase epsilon subunit b [Leishmania major strain
Friedlin]
Length = 552
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 106/428 (24%), Positives = 185/428 (43%), Gaps = 37/428 (8%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSII 61
+ + +I+K + Y L+ A+ SF+ R+ E+ DLL D F E + ++
Sbjct: 3 EPKDEIRKFAQAYKYNLKPLAVSRFASFLKRYGTGEEHRRDLLRDLFSLIGEQCCDNRLV 62
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
D+ + V S+ EA +G G+ S+++V+ VPK D + + S
Sbjct: 63 DELKADAVISL---QEAKIKGCLGT-DGSSSVQVVSLGAVPKVFVDEVSNELRVSSSSAA 118
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG-QTGRR 180
++ + R+ L +R R + + S D + GS + +L G G +
Sbjct: 119 LN-----RLQCLNQRYTLARRRCLRCGLYQK-SVDQRSPHDGSLALLPTSALEGLDPGLQ 172
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLS-KAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
+ + + D +LEDL +++ S ++++T F N + + V+GI QV
Sbjct: 173 VAVLGLLVVRDDEVFLEDLRGQIKLKFSEQSRVTQHCFVGNGFLTVVSGLWVNGILQVTR 232
Query: 240 CGFPPLEDRDQSLK-LLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
PP E R+ +L+ +G D FG + LR EK+ + ++++ + LD
Sbjct: 233 VDLPPAERREVTLRDAGSGMDLFGLAPRNPMEALR---EEKKRVQSVIIVMAHVHLDKAG 289
Query: 299 VMGKLEVV---LDGFESVEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFGK 347
M KL + G E+ FVF G+F S P + F + L++
Sbjct: 290 TMSKLARFFERMQGLSESELRDVTFVFTGDFSSVPLHFGDASHLPDIFDNSDRLQILLDG 349
Query: 348 LGQMIAAH-PRLKEHSRFLFIPGPDDAGPSTVL----PRCALPKYLTEELQKYIPNAIFS 402
LG+ IAA+ P +HS F+ IPGP D T+L P+ + + ++ +
Sbjct: 350 LGRCIAANAPTAAQHSHFVLIPGPSDM---TLLQGFQPQTPIATQFAKGVESRTKKLTVA 406
Query: 403 SNPCRLNF 410
NPCRL F
Sbjct: 407 PNPCRLRF 414
>gi|452840107|gb|EME42045.1| hypothetical protein DOTSEDRAFT_81053 [Dothistroma septosporum
NZE10]
Length = 788
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 103/429 (24%), Positives = 182/429 (42%), Gaps = 94/429 (21%)
Query: 69 VTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASA 128
++ + + + A E + S + S ++V+ AF P+ YD+ KKHF + + S
Sbjct: 184 LSGLTVDSPAPEEHEDASKNPRSWLKVVSAFEQPRLTYDADKKHFLSISAKPTMFPLPSH 243
Query: 129 KAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-----------CEISTIQSLVGQ- 176
K ++R+R+ ++ QR+ R+ F PS V + +I+ I +L+G+
Sbjct: 244 KTTIFRERYNIIHQRLLRNPAFQAPSMSSVQPKLSRRDKNSALQRQFYKITPIANLLGRG 303
Query: 177 TGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA-KITTG--FFTENTIVVAEGEMLVDG 233
+ ++G++ G L D + S+ +DL A + G +F IV LVDG
Sbjct: 304 STAHLLLGMLVIAPTGTLALNDPSGSISLDLQHAGSMQEGEPYFCPGMIV------LVDG 357
Query: 234 IFQV--------------------------ITCGFPPLEDRDQSLKL------LAG---- 257
+++ G PP+E RD +L + L G
Sbjct: 358 VYEEDWTGAGSSGLGNTGGVGGTIGGRFVGFEIGGPPVEKRDLALGINVKADDLGGGFGW 417
Query: 258 YDFFGGGTLKKEDTLRLADLEKRAAND----------MFVILSDIWLDNEEVMGKLEVVL 307
DF G G+ + + R+ LE+R +++S++ LDN ++ L VL
Sbjct: 418 TDFLGQGSERAVGS-RMRRLEQRLVGSEAELSEDVERKMIMISEVNLDNPVILSGLRKVL 476
Query: 308 DGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFL 365
+ + + + P FV MG+F S ++ S+ + F +L ++A P L S ++
Sbjct: 477 EHYAAGDQPPMTFVLMGDFSSK-AAMAGSGTGSIEYKELFNELAAVMADFPALLRKSTWV 535
Query: 366 FIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIPN----------------AIFS 402
F+PG D AG STV PR A+P T +++ AI++
Sbjct: 536 FVPGDHDAWASAFSAGASTVAPRAAVPDLFTNRIKRAFATAKTESRALKKDEMDGEAIWT 595
Query: 403 SNPCRLNFL 411
+NP RL+
Sbjct: 596 TNPARLSMF 604
>gi|256272440|gb|EEU07422.1| Dpb2p [Saccharomyces cerevisiae JAY291]
Length = 689
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 177/370 (47%), Gaps = 57/370 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY------QH-----AGSLPIHGEASAKAALYRDRFLLLFQ 142
+VI+A +F Y+ K F Q+ AG LP + K ++ R+ L
Sbjct: 171 KVINASQQQRFSYNPHKMQFIFVPNKKQNGLGGIAGFLP---DIEDKVQMFLTRYYLTND 227
Query: 143 RVSRDQHFSRPS-FDVVNSEFG-SCEIST--------------IQSLVGQTGRRWVM-GV 185
RV R+++F F+ ++S E+S I++L+G+ + +++ G+
Sbjct: 228 RVMRNENFQNSDMFNPLSSMVSLQNELSNTNRQQQSSSMSISPIKNLLGRDAQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFP 243
+++ G++ LED + SVEID+S+ T G ++ +V+ EG V F V + P
Sbjct: 288 LNKNFKGNWSLEDPSGSVEIDISQTIPTQGHYYVPGCMVLVEGIYYSVGNKFHVTSMTLP 347
Query: 244 PLEDRDQSLKLLAGYDFFGG---------GTLKKEDTLRLADLEKRAANDMFVIL-SDIW 293
P E R+ +L+ + D G L K+ +RL LEK + FVIL ++++
Sbjct: 348 PGERREITLETIGNLDLLGIHGISNNNFIARLDKDLKIRLHLLEKELTDHKFVILGANLF 407
Query: 294 LDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGKL 348
LD+ ++M L +L + P+L ++ G+F S P + + S + + F L
Sbjct: 408 LDDLKIMTALSKILQKLN--DDPPTLLIWQGSFTSVPVFASMSSRNISSSTQYKNNFDAL 465
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIF 401
+++ L E++ +FIPGP+D G S LP+ +P T+++ K N ++
Sbjct: 466 ATLLSRFDNLTENTTMIFIPGPNDLWGSMVSLGASGTLPQDPIPSAFTKKINKVCKNVVW 525
Query: 402 SSNPCRLNFL 411
SSNP R+ +L
Sbjct: 526 SSNPTRIAYL 535
>gi|448525237|ref|XP_003869085.1| Dpb2 subunit of DNA polymerase II (DNA polymerase epsilon) [Candida
orthopsilosis Co 90-125]
gi|380353438|emb|CCG22948.1| Dpb2 subunit of DNA polymerase II (DNA polymerase epsilon) [Candida
orthopsilosis]
Length = 670
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 168/381 (44%), Gaps = 73/381 (19%)
Query: 102 PKFRYDSIKKHF--YQHAGSLPIHGEAS----AKAALYRDRFLLLFQRVSRDQHFSRPSF 155
P+ +D +KHF Y LP + + ++ + + L+ R+SR+++F + S
Sbjct: 139 PRSLFDKSRKHFDVYLTKERLPFLSKLTLNTKSQVESQNNHYFLIMDRLSRNENFQKASM 198
Query: 156 DVVNSEFGSC---------EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEI 205
+ S S EI+ I++++G+ G+++++ G++S+ + LED +E+
Sbjct: 199 TSI-SNLNSLTIDGIGKNNEITLIKNMLGRDGQKFLLFGLLSKNSTDEYILEDTTGYIEL 257
Query: 206 DLSKAKITTG-FFTENTIVVAEG------------EMLVDGIFQVITCGFPPLEDRDQSL 252
+L++A G F+ V+AEG + + G F V PP E RD+SL
Sbjct: 258 NLNQAVKNQGSFYCIGMFVLAEGIYSASGGNLNQKQDYMGGCFYVSNLAQPPAERRDKSL 317
Query: 253 KLLAGYDFFG-----------GGTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVM 300
+ DF G K +L LEK N V++ SD++LD+ + +
Sbjct: 318 DVYGHLDFLGIHKHMVPTGDKAVKFPKPFRKKLLQLEKSLQNHKIVMMGSDLYLDSNKTL 377
Query: 301 GKLEV-----------VLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRL------ 343
++ LD E+ +P +F G+F S P S +S S L
Sbjct: 378 QAMQKFFHRLENTIIEALDSEETQSYIPLALIFTGSFTSRPLT-STNSTSDANLSNSELY 436
Query: 344 --QFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEEL 392
F + +M++ +P + + + + IPG +D ST P+ ++PK L
Sbjct: 437 KGNFDQFAKMLSEYPNIVQRCKIVLIPGDNDPWQSTYSLGSSCLNTFPQASIPKVFVNRL 496
Query: 393 QKYIP--NAIFSSNPCRLNFL 411
+ +P N I + NP RL++L
Sbjct: 497 ENLLPRGNLILAWNPTRLSYL 517
>gi|258568484|ref|XP_002584986.1| predicted protein [Uncinocarpus reesii 1704]
gi|237906432|gb|EEP80833.1| predicted protein [Uncinocarpus reesii 1704]
Length = 688
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 178/395 (45%), Gaps = 74/395 (18%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
RVI+AF P+ YDS ++HF S + + + +RDR+ ++QRV R+ F +P
Sbjct: 123 RVINAFEQPRVIYDSDRRHFVMSPFSSSLLPSSCDRIETFRDRYNRVYQRVLRNNAFRKP 182
Query: 154 S-----FDVVNSEF---GSCEISTIQSLVGQ-TGRRWVMGVISQLEDGHFYLEDLAASVE 204
S F S G I+ + SL G+ + ++G+I G YL DL ++
Sbjct: 183 SNISPAFRPTQSSLSPDGVYNITFVSSLQGRNSTSHLLLGLIHLSPSGGLYLSDLTGTIA 242
Query: 205 IDLSKAK-ITTG--FFTENTIVVAEG------------------EMLVDGIFQVITCGFP 243
+ + AK + G +F I++ +G E V G F V++ P
Sbjct: 243 LSIQHAKGVPAGETWFAPGMILLVDGIYEEQTNAGTQTSATCGYEGNVGGKFVVLSVAGP 302
Query: 244 PLEDRDQSLKL-LAGY-----------DFFGGGTLKKEDTLRLADLEKRAA----NDMFV 287
P E R+ SL + +GY DF G G+ + E RL L+++ + V
Sbjct: 303 PCERREVSLGISTSGYASISHEGFGWMDFIGVGSERTEGN-RLRRLKQKYSVTETRTKLV 361
Query: 288 ILSDIWLDNEEVMGKLEVVLDGFESVEV--VPSLFVFMGNFCSHPC--NLSFHSFSSLRL 343
I+S+I LD++ + L VL ++++ + +P F+ +GNF P F +
Sbjct: 362 IMSEINLDSQRNLEGLRNVLKAYDALPLARIPLAFLLIGNFAQRPVMGGNEFADSIDYKE 421
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLT------- 389
F +L +++ RL ++S F+F+PG +D G + +PR +P T
Sbjct: 422 HFDQLALVLSDCMRLLQNSMFIFVPGDNDPWTSCFCVGAAPPIPRGPIPDLFTSRVRHAF 481
Query: 390 ----EELQKYIP-----NAIFSSNPCRLNFLITVQ 415
EE Q ++ +AI+++NP RL+ V+
Sbjct: 482 NIANEEGQNFLSKKLKGSAIWTTNPARLSIFGPVE 516
>gi|212528786|ref|XP_002144550.1| DNA polymerase epsilon subunit B, putative [Talaromyces marneffei
ATCC 18224]
gi|210073948|gb|EEA28035.1| DNA polymerase epsilon subunit B, putative [Talaromyces marneffei
ATCC 18224]
Length = 756
Score = 106 bits (264), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 99/400 (24%), Positives = 174/400 (43%), Gaps = 80/400 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++V+DA+ P+ Y+ KKHF + S + YRDRF L++QR+ R++ F
Sbjct: 191 MKVVDAYDQPRLTYNPDKKHFETSINKPSFFPDPSHQITFYRDRFNLIYQRLLRNESFQT 250
Query: 153 PSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKA- 210
S ++NS + +I+ I +L+G+ G + +G++S G L DL ++ +DLS+
Sbjct: 251 SS--LLNSNRQTYKITPIANLLGRGGSQHMCLGLLSVSPAGEMSLTDLTGTIMLDLSETV 308
Query: 211 ---KITTGFFTENTIVVAEG-----EML--------------VDGIFQVITCGFPPLEDR 248
+ +F +V+ EG E++ + G IT PP E R
Sbjct: 309 PIPRGNGAWFCPGMMVLVEGIYEEEEVVKGSVLGGNSGIGGAIGGKLLGITIAGPPSEKR 368
Query: 249 DQSLKL--------------LAGYDFFGGGTLKKEDT------------LRLADLEKRAA 282
+ +L + DF G G+ + + +R AD ++
Sbjct: 369 EVTLGMNSVDSKGDIGTSGGFGWVDFLGVGSERAQGARMRKFEHRSLRQVRGADGQRNGR 428
Query: 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSFSS 340
++ VIL ++ LDN + L V + + E +P F+ +GNF +S
Sbjct: 429 RNI-VILGEVHLDNSRTLEALRSVFSIYSELPFEELPLAFLMIGNFIGKVGFGQSSVGNS 487
Query: 341 LRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEE 391
+ + F L +++ P L H+ F+F+PG +D AG S+ +PR A+P+ T
Sbjct: 488 IEYKECFDSLASVLSDFPALLSHTTFIFVPGDNDPWASTFTAGASSAIPRKAVPELFTSR 547
Query: 392 LQ---------------KYIPN-AIFSSNPCRLNFLITVQ 415
++ K P AI++SNP R++ V
Sbjct: 548 VKRAFASANSDSGDSASKSTPGEAIWTSNPSRISLFGPVH 587
>gi|363750205|ref|XP_003645320.1| hypothetical protein Ecym_2806 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888953|gb|AET38503.1| Hypothetical protein Ecym_2806 [Eremothecium cymbalariae
DBVPG#7215]
Length = 713
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/393 (25%), Positives = 179/393 (45%), Gaps = 60/393 (15%)
Query: 76 AEAAAEGDSGSASN-----HSAIRVIDAFLVPKFRYDSIKKHF-------YQHAGSLPIH 123
A +AE D+ +ASN ++I++F +F YD++KK F Q+ S I
Sbjct: 166 ANYSAENDASAASNDELNWSDYFKIINSFSQQRFTYDAVKKRFRFVRPKEMQNLKSSFIS 225
Query: 124 G----EASAKAALYRDRFLLLFQRVSRDQHFSR-PSFDVVNS-------------EFGSC 165
+ L+ R+ L+ +RV R+++F +++ ++S GS
Sbjct: 226 KLKIPTVESGIPLFSTRYHLVKERVLRNENFQNGDTYNPLSSMAQLENQLKGSNLNLGSS 285
Query: 166 ---EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTEN 220
I+ I++L+G+ G+ +++ GV+ + G + LED + V++D+S+A T G ++
Sbjct: 286 VYMSITQIKNLLGRDGKNFLLLGVLRKNSKGVWLLEDPSGQVDLDISEAIPTKGSYYVPG 345
Query: 221 TIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKED---------T 271
I++AEG + +F V + PP E R+ +L + D G L E
Sbjct: 346 CILLAEG-IYSRNMFHVSSITHPPGERREVTLDAIGNLDMLGIHELSSEHYIARLDRDLK 404
Query: 272 LRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP 330
+RL LEK + FV+L +I+LD L V + P++ V G+F S P
Sbjct: 405 IRLHYLEKELTDHRFVLLGGNIFLDEVNTFDALTKVFKVLNADP--PTVIVLNGSFNSTP 462
Query: 331 CNLSF-----HSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV------- 378
+ S S ++ + F L +++ + RL F+FIPGP+D S V
Sbjct: 463 LHPSMTSKNISSTTTYKNNFDALASLLSNYERLINECTFIFIPGPNDPWSSMVTSGVPGL 522
Query: 379 LPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
LP+ +P + + + + S P R+ +L
Sbjct: 523 LPQKEIPINFVSRVNRICRHVFWGSTPTRVAYL 555
>gi|396473592|ref|XP_003839374.1| similar to DNA polymerase epsilon subunit B [Leptosphaeria maculans
JN3]
gi|312215943|emb|CBX95895.1| similar to DNA polymerase epsilon subunit B [Leptosphaeria maculans
JN3]
Length = 777
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 96/399 (24%), Positives = 160/399 (40%), Gaps = 81/399 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF PK Y+ +KHF + A + + S K L+R R+ ++ QR+ R++ F
Sbjct: 206 MKVIGAFEQPKLIYNVTQKHFEKSASKPSLFPDPSHKTELFRQRYHIVHQRILRNETFQA 265
Query: 153 PSFDVVN----SEFGSC------EISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAA 201
P+F S GS I+ + +L+G+TG ++G+++ G L DL
Sbjct: 266 PTFSTARSATLSRTGSAATSQMNTITPVANLLGRTGTTHLLLGMLTVSATGQLSLSDLTG 325
Query: 202 SVEIDLSKAKI---TTGFFTENTIVVAEGEMLVDGI------------------FQVITC 240
++ +D+ A+ +F IV+ EG D F +
Sbjct: 326 TIALDIQHARPIPENGAYFAPGMIVLVEGSYEEDAGTGSTLGGSGGIGGTIGGKFLGFSV 385
Query: 241 GFPPLEDRDQSL-------------KLLAGYDFFGGGTLKKEDTLRLADLEKRAAN---- 283
G PP E R + G DF G G+ + + R+ + + N
Sbjct: 386 GHPPCERRTATFGGVEEVDKNSLAGPAFGGTDFLGVGSQRATGS-RMNKIASKLLNAEQS 444
Query: 284 DMFVILSDIWLDNEEVMGKLEVVL-----DGFESVEVVPSLFVFMGNFCSHPCNLSFHSF 338
V+ SD+ LD + L +L D + V P + MGNF S
Sbjct: 445 HHIVMASDLHLDIPSTLSALRTLLRTYTPDPTDVQPVYPHAIILMGNFSSKASLAGVPGA 504
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS-------TVLPRCALPKYLT 389
S+ + F L ++ +L H+ +F+PG +DA PS T LPR +P T
Sbjct: 505 GSIEYKEHFDALASVLTDFQQLIAHTTLIFVPGDNDAWPSAFSAGAATPLPRKQVPHLFT 564
Query: 390 EELQKYIPNA-----------------IFSSNPCRLNFL 411
+++ + A I++SNP RL++
Sbjct: 565 NRIRRVVAEANREVWGPGKAKGKEGEVIWTSNPSRLSWF 603
>gi|449299523|gb|EMC95536.1| hypothetical protein BAUCODRAFT_71065 [Baudoinia compniacensis UAMH
10762]
Length = 776
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 107/412 (25%), Positives = 170/412 (41%), Gaps = 84/412 (20%)
Query: 77 EAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDR 136
E + ++ S + ++VI A P+F YD+ KKHF Q S K A++R+R
Sbjct: 181 EDGEQDEAASKDPRAWLKVISASDQPRFSYDADKKHFVQLTNKPSFFPPPSHKTAVFRER 240
Query: 137 FLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQ---------SLVGQTG-RRWVMGVI 186
+ ++ QR+ R++ F PSF ++ + +T Q +L+G+ G ++G++
Sbjct: 241 YNIIHQRLLRNEAFQAPSFSSRSTTLKRTDSTTTQQFYKITPIANLLGRGGTSHLLLGML 300
Query: 187 SQLEDGHFYLEDLAASVEIDLSKAKITTG----FFTENTIVVAEGEMLVDGIFQV----- 237
G L D + S+ +DL A G +F IV LVDG+++
Sbjct: 301 VIAPTGTLALNDPSGSIPLDLQHAHPLQGEDSSYFCPGMIV------LVDGVYEEDWAGA 354
Query: 238 ---------------------ITCGFPPLEDRDQSLKLLAGY-DFFG-------GGTLKK 268
+ G PP+E R SL G+ DF G GG ++K
Sbjct: 355 GSSGLGNTGGVGGTIGGRFLGFSIGGPPVEKRSVSLAEGFGWTDFLGLGSERAVGGRMRK 414
Query: 269 EDTLRLADLEKRAA----NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMG 324
+T RL D E A +ILS+I LD + L VL + + + P V MG
Sbjct: 415 LET-RLLDTEAEGAVSEQRRKTIILSEITLDRPLTLTALRKVLQHYSTWDDPPMTLVLMG 473
Query: 325 NFCSHPCNLSFHSFS-SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPS 376
NF S S + F L +++ P L S ++F+PG +D AG S
Sbjct: 474 NFSSQAAMAGAAMGSIEYKELFNDLAAVLSDFPSLLRQSTWIFVPGDNDAWSSAFSAGAS 533
Query: 377 TVLPRCALPKYLTEELQKYIP-----------------NAIFSSNPCRLNFL 411
+PR +P T +++ AI++SNP RL+
Sbjct: 534 AAVPREGVPDVFTSRVKRVFATAKAEAGAGAKKDGLDGEAIWTSNPTRLSLF 585
>gi|350635276|gb|EHA23638.1| hypothetical protein ASPNIDRAFT_173303 [Aspergillus niger ATCC
1015]
Length = 748
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 180/429 (41%), Gaps = 92/429 (21%)
Query: 74 LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALY 133
L+ E AAE + +RVI+AF +P+ Y++ K++F + +S + L+
Sbjct: 167 LEGEGAAENSDVPSHPRHWVRVIEAFDIPRLTYNADKRYFEVARSRPTLFPPSSHRTNLF 226
Query: 134 RDRFLLLFQRVSRDQHFSRPSFD--VVNSEFGSC------EISTIQSLVGQTG-RRWVMG 184
RDR+ ++ QR+ R + F PS ++ S +++ I +L+G+ G ++G
Sbjct: 227 RDRYNVIHQRLLRHESFQSPSGPSRILRKSSSSLAVTQGYKLTPIANLLGRNGTSHLILG 286
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGE-MLVDGIFQ------- 236
++S G L DL S+ +DL A++ E+ +A G +LVDGI++
Sbjct: 287 LLSMSPTGDLNLSDLTGSISLDLRHARM----VPEDGAWLAPGMFVLVDGIYEEEENVRG 342
Query: 237 -------------------VITCGFPPLEDRDQSLKL--------------LAGYDFFGG 263
V CG PP E R+ SL + L DF G
Sbjct: 343 STLGGNSGVGGAIGGVFVGVSICG-PPCERRETSLGMNNQQSGREVSSSGGLGWIDFLGV 401
Query: 264 GTLKKE-------DTLRLADLEKRAANDM---FVILSDIWLDNEEVMGKLEVVLDGFE-- 311
G+ + + +T L + A D L ++ LD+ + L V +
Sbjct: 402 GSERAQGPRMRHIETSYLRGVHGSAEGDRRLKVAALGEVNLDDMRTLDALRKVFSVYHHL 461
Query: 312 SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPG 369
+E PS+FV GNF S S+ + F L +++ P L +HS F+F+PG
Sbjct: 462 PLEERPSIFVLTGNFVQKAIINSSGQAGSIEYKEHFDALSLILSEFPSLLQHSTFVFVPG 521
Query: 370 PDD-------AGPSTVLPRCALPKYLTEELQKYIPN----------------AIFSSNPC 406
+D AG ++ +PR ++P+ T +++ AI++SNP
Sbjct: 522 DNDPWPSAFSAGAASPIPRHSIPELFTTRVKRAFATANSQLDSSQPSGPPGEAIWTSNPS 581
Query: 407 RLNFLITVQ 415
RL V
Sbjct: 582 RLTLFGPVH 590
>gi|448104708|ref|XP_004200318.1| Piso0_002903 [Millerozyma farinosa CBS 7064]
gi|448107857|ref|XP_004200949.1| Piso0_002903 [Millerozyma farinosa CBS 7064]
gi|359381740|emb|CCE80577.1| Piso0_002903 [Millerozyma farinosa CBS 7064]
gi|359382505|emb|CCE79812.1| Piso0_002903 [Millerozyma farinosa CBS 7064]
Length = 658
Score = 105 bits (261), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 92/374 (24%), Positives = 167/374 (44%), Gaps = 56/374 (14%)
Query: 94 RVIDAFLVPKFRYDSIKKHF-YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
R I+ P + +D +K F S + + + + R+ L+ R+SR+ F +
Sbjct: 128 RFINPDKQPNYFFDHQRKQFSLIPTPSSKLTFQTKNAVSYFNRRYHLIRDRLSRNSSFQK 187
Query: 153 PSFDVVNSEFGSC-----EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEID 206
PSF ++S S E++ I++++G+ G ++++ G++SQ +G++ LED + + ++
Sbjct: 188 PSFSSISSIQKSVSNQINELTLIKNVLGRDGSKFLLFGLLSQDAEGNYILEDSSDYIILN 247
Query: 207 LSKA-KITTGFFTENTIVVAEG-----------EMLVDGIFQVITCGFPPLEDRDQSLKL 254
L +A K + F+ V+ EG ++ G F V G PP E R+ SL+
Sbjct: 248 LKQAYKSSDCFYCLGMFVIVEGIYSATTNVSTNSNVISGCFYVNYLGHPPAERREVSLEA 307
Query: 255 LAGYDFFGGG--------------TLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEV 299
DF G + K +L +EK +IL SD +LDN +
Sbjct: 308 YGNLDFMGINRDIEDTHISSSHIFRINKNLRKKLLSMEKENVEHKLLILGSDCFLDNAKF 367
Query: 300 MGKLEVVLDG-----FESVEVVPSLFVFMGNFCSHPCNLSFHSFSSL------RLQFGKL 348
M L+ +L E+ + P V MG+F S P + S +++ + F L
Sbjct: 368 MEGLKKLLSKIEDSIIENSDNAPLALVLMGSFTSRPLTPTDSSTATISNSEDYKNGFDNL 427
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDDAGPS---------TVLPRCALPKYLTEELQKYIP-- 397
+++ + ++ + IPGP D + + P+ ++PK L+K +P
Sbjct: 428 ASILSKFKNIVSRTKIVLIPGPHDPWQALYTLGSSNLNIFPQFSIPKIFLNRLEKLLPKG 487
Query: 398 NAIFSSNPCRLNFL 411
N I NP R+N+L
Sbjct: 488 NLIIGWNPIRVNYL 501
>gi|347828858|emb|CCD44555.1| similar to DNA polymerase epsilon subunit B [Botryotinia
fuckeliana]
Length = 781
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 87/405 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VIDAF P+ Y+ KKHF + + AS K L+++R+ ++ QR+ R++ F
Sbjct: 219 LKVIDAFEQPRLVYNVAKKHFDRDTSKPSLFPPASHKTLLFQNRYNVIHQRLLRNESFQT 278
Query: 153 PSF-----------DVVNSEFGSCEISTIQSLVGQT-GRRWVMGVISQLEDGHFYLEDLA 200
P+F + ++ S +++ I +L+G+ ++G++S G + DL
Sbjct: 279 PAFQGGKSSLQRSTSAITTQQQSYKLTPIANLLGRNRSSHMLLGLLSISPTGTLAINDLT 338
Query: 201 ASVEIDLSKAKIT---TGFFTENTIVVAEGE-------------------MLVDGIFQVI 238
S+ +DL+ A + +F +V+ +G + G F
Sbjct: 339 GSIALDLTHAAAIPEDSAWFAPGMMVLVDGTYEEDETGTSSRLGGNGGVGGTISGKFVGF 398
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL----------RLADLEKR-------- 280
G PP E R +L D GG D L ++ LE++
Sbjct: 399 FIGHPPPERRHVTLGTAGEGDTTAGGGFGWVDFLGVGSSRALGNKMQRLEQKLLRPPPPD 458
Query: 281 --------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNFCSHP 330
+ VIL D+ LD + + L+ +L + S P F+ +G+F SH
Sbjct: 459 TDTDDPPPPSRGRVVILGDVHLDIPQTLQALKKILSLYSSEPEGCTPMTFILLGSFVSHA 518
Query: 331 CNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPR 381
S S+ + F L +++ +P + + F+FIPGP+DA G + LPR
Sbjct: 519 VLARGGSGGSIEYKEYFDSLAAVLSEYPTILSTATFIFIPGPNDAWVSAFSSGSTVPLPR 578
Query: 382 CALPKYLTEELQKYIPN----------------AIFSSNPCRLNF 410
+P+ T +++ N AI++SNP R++
Sbjct: 579 KPVPEMFTSRIKRAFANANTEMEKEHGNKGDGEAIWTSNPARVSL 623
>gi|154296337|ref|XP_001548600.1| hypothetical protein BC1G_12995 [Botryotinia fuckeliana B05.10]
Length = 781
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 87/405 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VIDAF P+ Y+ KKHF + + AS K L+++R+ ++ QR+ R++ F
Sbjct: 219 LKVIDAFEQPRLVYNVAKKHFDRDTSKPSLFPPASHKTLLFQNRYNVIHQRLLRNESFQT 278
Query: 153 PSF-----------DVVNSEFGSCEISTIQSLVGQT-GRRWVMGVISQLEDGHFYLEDLA 200
P+F + ++ S +++ I +L+G+ ++G++S G + DL
Sbjct: 279 PAFQGGKSSLQRSTSAITTQQQSYKLTPIANLLGRNRSSHMLLGLLSISPTGTLAINDLT 338
Query: 201 ASVEIDLSKAKIT---TGFFTENTIVVAEGE-------------------MLVDGIFQVI 238
S+ +DL+ A + +F +V+ +G + G F
Sbjct: 339 GSIALDLTHAAAIPEDSAWFAPGMMVLVDGTYEEDETGTSSRLGGNGGVGGTISGKFVGF 398
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL----------RLADLEKR-------- 280
G PP E R +L D GG D L ++ LE++
Sbjct: 399 FIGHPPPERRHVTLGTAGEGDTTAGGGFGWVDFLGVGSSRALGNKMQRLEQKLLRPPPPD 458
Query: 281 --------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNFCSHP 330
+ VIL D+ LD + + L+ +L + S P F+ +G+F SH
Sbjct: 459 TDTDDPPPPSRGRVVILGDVHLDIPQTLQALKKILSLYSSEPEGCTPMTFILLGSFVSHA 518
Query: 331 CNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPR 381
S S+ + F L +++ +P + + F+FIPGP+DA G + LPR
Sbjct: 519 VLARGGSGGSIEYKEYFDSLAAVLSEYPTILSTATFIFIPGPNDAWVSAFSSGSTVPLPR 578
Query: 382 CALPKYLTEELQKYIPN----------------AIFSSNPCRLNF 410
+P+ T +++ N AI++SNP R++
Sbjct: 579 KPVPEMFTSRIKRAFANANTEMEKENGNKGDGEAIWTSNPARVSL 623
>gi|296828120|ref|XP_002851278.1| DNA polymerase epsilon subunit B [Arthroderma otae CBS 113480]
gi|238838832|gb|EEQ28494.1| DNA polymerase epsilon subunit B [Arthroderma otae CBS 113480]
Length = 743
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 104/441 (23%), Positives = 192/441 (43%), Gaps = 74/441 (16%)
Query: 42 AIDLLLDQFEHES-SLKSSIIDKESVNRVTSVLLQAEA----AAEGDSGSASNHSA--IR 94
AID + Q + E +L S ++ N+ SV + E AE + +N + ++
Sbjct: 134 AIDTAIPQRKREQITLSRSDSPVQTANKDVSVPQETEPDGSEPAEPPEDTPNNRARKRVK 193
Query: 95 VIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS 154
++ AF + Y+ K+ F G + AS + +L+RDR+ + QR+ R++ F +
Sbjct: 194 IVSAFEQQRLTYNMNKRQFEPPHGHPSLFPPASNRVSLFRDRYYRVHQRLLRNETFQTST 253
Query: 155 FDVVNSEFGSC-------EISTIQSLVGQ-TGRRWVMGVISQLEDGHFYLEDLAASVEID 206
SE + +I++I SL G+ + ++G+ S G + L D + +V ID
Sbjct: 254 LPTSFSEANTATPSNLPYKITSITSLQGRGSTNHLLLGLFSVSPGGGYNLSDPSGTVAID 313
Query: 207 LSKAK---------------ITTGFFT-ENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQ 250
++ AK + G + E+ VA G + G F I+ G PP E R+
Sbjct: 314 MTHAKGIPANGAWFVPGMILLVDGIYEDEDEDTVARGAGAIGGKFIAISVGGPPCERREV 373
Query: 251 SLKL-------------LAGYDFFGGGTLKKE-DTLRLADLEKRAANDM-FVILSDIWLD 295
SL + + D GT + + + + + ++ VI+ ++ LD
Sbjct: 374 SLGIDNQSRGWNTMPPTDSAADPMSAGTESNQPECMNINSISRQPQEKQRMVIMGEVNLD 433
Query: 296 NEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQM 351
N + + L +VL +++ +PSLFV +GNF H + + S+ + F L +
Sbjct: 434 NPKTLQALSMVLGQYDAASDNQLPSLFVLIGNFV-HDAAIGAGNCGSIEYKEFFDSLASV 492
Query: 352 IAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYI-------- 396
+ P L +S F+F+PG +D G + +PR +P+ +++
Sbjct: 493 LMQFPNLLRNSTFVFVPGENDPWASSFSPGATACIPRPLIPELFRSRVRRVFQSAYSQDH 552
Query: 397 --------PNAIFSSNPCRLN 409
+AI+SSNP R++
Sbjct: 553 SISSRQIDESAIWSSNPTRIS 573
>gi|380482609|emb|CCF41133.1| DNA polymerase alpha/epsilon subunit B [Colletotrichum
higginsianum]
Length = 653
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 167/403 (41%), Gaps = 91/403 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
+ +IDA+ P+F Y+ KKHF + + A+ K AL+R+R+ ++ QR+ R++ F
Sbjct: 75 LNIIDAYDQPRFSYNVAKKHFERETSKPSLLPPAAHKTALFRNRYNVIHQRLLRNESFQT 134
Query: 153 --------PSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
PS S + +I+ I +L+G+ G ++G+++ L G + DL+A++
Sbjct: 135 SAVASARAPSLKRSASNQLNHKITPIANLLGRHGSHHMLLGMLNILPAGGLAISDLSATI 194
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+D+S+A + +F+ IV LVDG+ F
Sbjct: 195 ALDVSQAVAIPEDSAWFSPGMIV------LVDGVYEEEEESVGKGLSGSSGVGGTLGGRF 248
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR- 280
Q G PP E R +L + DF G G+ ++ ++ LE+R
Sbjct: 249 QAFFIGQPPCEKRKATLGVSGPDGGQDHTIGGGFGWIDFLGVGS-ERAVGFKMRKLEQRL 307
Query: 281 ---------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSH 329
+ VIL ++ LD + L +L + E P FV GNF H
Sbjct: 308 LPRHSAEEVPSRGRMVILGELNLDQPRSLQALRRILTIYAAEPEGATPMSFVITGNFTQH 367
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L ++ P L + S F+F+PG +D AG +T LP
Sbjct: 368 AVLARGGSGGSIEYKEYFDALASTLSEFPALLQTSTFVFVPGDNDGWVSSFTAGAATPLP 427
Query: 381 RCALPKYLTEELQKYIP------------NAIFSSNPCRLNFL 411
R P T +++ AI++SNP R+
Sbjct: 428 RKGAPDVFTSRIRRVFAAANAEVGSKSDGEAIWTSNPSRMTLF 470
>gi|150951339|ref|XP_001387649.2| DNA-directed DNA polymerase epsilon, subunit B [Scheffersomyces
stipitis CBS 6054]
gi|149388511|gb|EAZ63626.2| DNA-directed DNA polymerase epsilon, subunit B [Scheffersomyces
stipitis CBS 6054]
Length = 680
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 166/354 (46%), Gaps = 62/354 (17%)
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNS-----EFGSC-EISTIQ 171
G+LP + + + + L+ +R+ +++ R+SR+++F + SF +++ GS EI+ I+
Sbjct: 172 GTLPNNLQNTVE--LFNNRYHIIYDRLSRNENFQKSSFSSISTINKSLHNGSANEITLIK 229
Query: 172 SLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEG-- 227
+++G+ G ++++ G++S+ + LED +E++L++ T G F+ V+ EG
Sbjct: 230 NVLGRDGSKFILCGLLSKDANDSCILEDSTDYIELNLTQTYKTQGSFYCPGMFVIVEGIY 289
Query: 228 ----------EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG-----GGTLKKEDTL 272
+ G F V G PP E RD S + DF G G + + L
Sbjct: 290 SASGGSSNQSTNYIGGCFHVSNIGHPPAERRDASSENYGNLDFLGIHKQIGNSTANDKVL 349
Query: 273 --------RLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFES--VEV------ 315
+LA LEK V+L S+ LDN +++ L+ +L E+ +E+
Sbjct: 350 KINKYFRRKLATLEKSLVGHKLVLLGSECHLDNFKILDGLKKLLHKLENSIIEIMESEDG 409
Query: 316 -VPSLFVFMGNFCSHPCNLSFHSFSSL------RLQFGKLGQMIAAHPRLKEHSRFLFIP 368
VP V G+F S P + S++ + F +++ P + + + + IP
Sbjct: 410 HVPLALVMTGSFSSSPLTTTNSLVSNISNSETYKSNFDNFANILSNFPNVIKTCKLVLIP 469
Query: 369 GPDDAGPST---------VLPRCALPKYLTEELQKYIP--NAIFSSNPCRLNFL 411
G +D ST P+ ++P+ L++ +P N I S NP R+++L
Sbjct: 470 GKNDPWQSTYSLGGSSLNCFPQKSIPRLFVSRLERLLPKGNLILSWNPARISYL 523
>gi|354545724|emb|CCE42452.1| hypothetical protein CPAR2_200950 [Candida parapsilosis]
Length = 669
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 167/381 (43%), Gaps = 73/381 (19%)
Query: 102 PKFRYDSIKKHF--YQHAGSLPIHGEASAKAALY----RDRFLLLFQRVSRDQHFSRPSF 155
P+ +D +KHF Y LP+ + + + L+ R+SR+++F + S
Sbjct: 139 PRSVFDKSRKHFDVYLTKERLPLLSRLTLNTKSLVESQNNHYYLIMDRLSRNENFQKASM 198
Query: 156 DVVNSEFGSC---------EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEI 205
+ S S EI+ I++++G+ G+++++ G++S+ + LED +E+
Sbjct: 199 TSI-SNLNSLTIDGIGKNNEITLIKNMLGRDGQKFLLFGLLSKNSTDEYILEDATGYIEL 257
Query: 206 DLSKAKITTG-FFTENTIVVAEG------------EMLVDGIFQVITCGFPPLEDRDQSL 252
+L++A G F+ V+ EG + + G F V PP E RD+SL
Sbjct: 258 NLNQAVKNQGSFYCLGMFVLVEGIYSASGGHLNQKQDYIGGCFYVSNIAQPPAERRDKSL 317
Query: 253 KLLAGYDFF---------GGGTLKKEDTLR--LADLEKRAANDMFVIL-SDIWLDNEEVM 300
+ DF G +K R + LEK + +++ SD++LD+ + +
Sbjct: 318 DVYGHVDFLGIHKHMVPAGDKAIKVPKAFRKKMVQLEKSLQSHRIIMMGSDLYLDSNKTL 377
Query: 301 GKLEV-----------VLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRL------ 343
++ LD E+ +P VF G+F S P S +S S L
Sbjct: 378 QAMQKFFHRLENSIIEALDSEETQSYIPLALVFTGSFTSRPLT-STNSTSDANLSNSELY 436
Query: 344 --QFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEEL 392
F + ++++ HP + + + + IPG +D ST P+ ++PK L
Sbjct: 437 KGNFDQFAKILSEHPNIVQRCKVVLIPGDNDPWQSTYSLGSSCLNAFPQPSIPKVFVNRL 496
Query: 393 QKYIP--NAIFSSNPCRLNFL 411
+K +P N I + NP RL++L
Sbjct: 497 EKLLPRGNLILAWNPTRLSYL 517
>gi|154281431|ref|XP_001541528.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411707|gb|EDN07095.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 748
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 182/416 (43%), Gaps = 86/416 (20%)
Query: 81 EGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLL 140
E DS I++I AF + Y+ KK+F + +A + RDR+ ++
Sbjct: 155 EEDSSLNDTRRWIKIISAFEQHRPVYNINKKNFDIITSPPSLFPPPYQRANILRDRYNII 214
Query: 141 FQRVSRDQHFSRP---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYL 196
+QR+ R++ F P S +S ++++I +L+G+TG ++G++S G L
Sbjct: 215 YQRILRNEAFRIPLQGSTSSHSSTTRYYKLTSIANLLGRTGTSHLLLGLLSMSPAGDLSL 274
Query: 197 EDLAASVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ----------------- 236
D S+ +D++ A+ +F IV+ +G +G+
Sbjct: 275 TDPTGSIALDITHARAIPEDGAWFAPGMIVLVDGIYREEGVVTGSTLNGSGGVGGTIGGT 334
Query: 237 --VITCGFPPLEDR-----------DQSLKLLAGY---DFFGGGT--------------- 265
V + G PP E R D ++ + G+ DF G G+
Sbjct: 335 FTVASVGGPPCERRETSTGAGNRGGDDAMTVEGGFGWVDFLGVGSERGRGYRMRQVEKIC 394
Query: 266 LKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFM 323
L K L D+ KR V++S++ LD + G L V + + S+ + +P +F+ +
Sbjct: 395 LDKGPHYELRDIRKR-----IVVMSEVNLDVPKTEGALTHVFECYASLPEQQLPLVFILI 449
Query: 324 GNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AG 374
GNF H S S+ + F L +++ +PRL +++ F+F+PG +D AG
Sbjct: 450 GNFVQHAVISGGGSGGSIECKEYFDILASVLSNYPRLLQNATFVFVPGDNDPWASAYSAG 509
Query: 375 PSTVLPRCALPKYLTEELQ--------------KYIP-NAIFSSNPCRLNFLITVQ 415
ST +PR A+P+ T L+ K+IP AI+SSNP RL+ V
Sbjct: 510 SSTTVPRDAIPELFTSRLKRAFTHANNELPSRTKHIPGQAIWSSNPTRLSLFGPVH 565
>gi|310793629|gb|EFQ29090.1| DNA polymerase alpha/epsilon subunit B [Glomerella graminicola
M1.001]
Length = 801
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 166/402 (41%), Gaps = 91/402 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
+ VIDA+ P+F Y+ KKHF + + A K AL+R+R+ ++ QR+ R++ F
Sbjct: 223 LNVIDAYDHPRFSYNVAKKHFERETSKPSLLPPAKNKTALFRNRYNVIHQRLLRNESFQT 282
Query: 153 --------PSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
PS +S + +I+ I +L+G+ G ++G+++ L G + DL A++
Sbjct: 283 SAVASARAPSLKRSSSNQLNHKITPISNLLGRHGSHHMLLGMLNVLPAGGLAISDLTATI 342
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+D+S+A + +F IV LVDG+ F
Sbjct: 343 ALDVSQAVAIPEDSAWFAPGMIV------LVDGVYEEEEESTGKGLSGSSGVGGTLGGRF 396
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR- 280
Q G PP E R +L + DF G G+ + + ++ LE+R
Sbjct: 397 QGFFIGQPPCEKRKATLGVSGPDGGQDHTIGGGFGWIDFLGVGSERAVGS-KMRKLEQRL 455
Query: 281 ---------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNFCSH 329
+ VIL ++ LD + L +L + + V P F+ GNF H
Sbjct: 456 LPRHSAEEVPSRGRMVILGELNLDQPRTLQALRRILTIYAAKPEGVSPMSFIITGNFTQH 515
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L ++ P L + S F+F+PG +D AG +T LP
Sbjct: 516 AVLARGGSGGSIEYKEYFDALASTLSEFPTLLQTSTFIFVPGDNDAWVSSFTAGAATPLP 575
Query: 381 RCALPKYLTEELQKYIP------------NAIFSSNPCRLNF 410
R P T +++ AI++SNP R+
Sbjct: 576 RKGAPDVFTSRIRRVFAAANAEVGAKSDGEAIWTSNPSRVTL 617
>gi|145234482|ref|XP_001400612.1| DNA polymerase epsilon subunit B [Aspergillus niger CBS 513.88]
gi|134057558|emb|CAK48912.1| unnamed protein product [Aspergillus niger]
Length = 748
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 105/429 (24%), Positives = 179/429 (41%), Gaps = 92/429 (21%)
Query: 74 LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALY 133
L+ E AAE + +RVI+AF +P+ Y++ K++F + +S + L+
Sbjct: 167 LEGEGAAENSDVPSHPRHWVRVIEAFDIPRLTYNADKRYFEVARSRPTLFPPSSHRTNLF 226
Query: 134 RDRFLLLFQRVSRDQHFSRPSFD--VVNSEFGSC------EISTIQSLVGQTG-RRWVMG 184
RDR+ ++ QR+ R + F PS ++ S +++ I +L+G+ G ++G
Sbjct: 227 RDRYNVIHQRLLRHESFQSPSGPSRILRKSSSSLAVTQGYKLTPIANLLGRNGTSHLILG 286
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGE-MLVDGIFQ------- 236
++S G L DL S+ +DL A++ E+ +A G +LVDGI++
Sbjct: 287 LLSMSPTGDLNLSDLTGSISLDLRHARM----VPEDGAWLAPGMFVLVDGIYEEEENVRG 342
Query: 237 -------------------VITCGFPPLEDRDQSLKL--------------LAGYDFFGG 263
V CG PP E R+ SL + L DF G
Sbjct: 343 STLGGNSGVGGAIGGVFVGVSICG-PPCERRETSLGMNNQQSGREVSSSGGLGWIDFLGV 401
Query: 264 GTLKKE-------DTLRLADLEKRAANDM---FVILSDIWLDNEEVMGKLEVVLDGFE-- 311
G+ + + + L + A D L ++ LD+ + L V +
Sbjct: 402 GSERAQGPRMRHIEASYLRGVHGSAEGDRRLKVAALGEVNLDDMRTLDALRKVFSVYHHL 461
Query: 312 SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPG 369
+E PS+FV GNF S S+ + F L +++ P L +HS F+F+PG
Sbjct: 462 PLEERPSIFVLTGNFVQKAIINSSGQAGSIEYKEHFDALSLILSEFPSLLQHSTFVFVPG 521
Query: 370 PDD-------AGPSTVLPRCALPKYLTEELQKYIPN----------------AIFSSNPC 406
+D AG ++ +PR ++P+ T +++ AI++SNP
Sbjct: 522 DNDPWPSAFSAGAASPIPRHSIPELFTTRVKRAFATANSQLDSSQPSGPPGEAIWTSNPS 581
Query: 407 RLNFLITVQ 415
RL V
Sbjct: 582 RLTLFGPVH 590
>gi|367017222|ref|XP_003683109.1| hypothetical protein TDEL_0H00390 [Torulaspora delbrueckii]
gi|359750773|emb|CCE93898.1| hypothetical protein TDEL_0H00390 [Torulaspora delbrueckii]
Length = 687
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 174/378 (46%), Gaps = 69/378 (18%)
Query: 94 RVIDAFLVPKFRYDSIKKHFY--QHAGSLPIH----------GEASAKAALYRDRFLLLF 141
+VI++ K+ YD +K F S P + ++ +++ +RF L+
Sbjct: 168 KVINSSEQAKYSYDPVKLQFTFTPVKKSTPSEEFRSLIKDRVPDINSNTSIFSNRFYLIR 227
Query: 142 QRVSRDQHFSRPS-FDVVNS--------EFGSCEIS------TIQSLVGQTGRRWVM-GV 185
R+ R+ F F+ ++S GS EIS I++L+G+ G+ +++ G+
Sbjct: 228 DRLLRNDSFQNADDFNPLSSIAAMQQDLNNGSGEISRAMSVTQIKNLLGRDGQNFLLLGL 287
Query: 186 ISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDG-IFQVITCGFP 243
+S+ G + LED + +EID+S+A T G ++ +V+AEG G F V + P
Sbjct: 288 LSKNAKGGWSLEDPSGCIEIDISQAYPTKGLYYVPGCVVLAEGIYFTVGHKFHVSSVTHP 347
Query: 244 PLEDRDQSLKLLAGYDFFG---------GGTLKKEDTLRLADLEKRAANDMFVILSDI-- 292
P E R+ +L+ + D G L KE +RL LEK + F+IL +
Sbjct: 348 PGERRENTLEAIGNLDLLGLHGQASSNYVARLDKELKIRLHLLEKELTDHRFIILGGVFI 407
Query: 293 -------WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHS--FSSLRL 343
W + +V+ + + P+ + G+F + P + S S SS L
Sbjct: 408 LGWNLIPWKHSSKVLTTIS---------DDPPTAIILHGSFTAVPVHASMSSRNVSSTTL 458
Query: 344 Q---FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV-------LPRCALPKYLTEELQ 393
F L +I++ + ++S F+F+PG +D STV P+ +P T++L+
Sbjct: 459 YQSIFDDLADLISSFDEIAQNSTFVFVPGINDPWGSTVSMGSAHAWPQQPVPSRFTQKLK 518
Query: 394 KYIPNAIFSSNPCRLNFL 411
+ + I++SNP RL +L
Sbjct: 519 RVCKDVIWASNPTRLAYL 536
>gi|115398397|ref|XP_001214790.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192981|gb|EAU34681.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 749
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 107/444 (24%), Positives = 184/444 (41%), Gaps = 97/444 (21%)
Query: 60 IIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGS 119
++ ES T++ E D+ + H I+V++AF +P+ Y++ KK+F
Sbjct: 151 VLASESQQAPTTISSDNMDQGESDTPTHPRH-WIKVVEAFDIPRLTYNADKKYFEITKSK 209
Query: 120 LPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVV---NSEFGS--C-EISTIQSL 173
+ S K L+RDR+ ++QR+ R++ F S S F S C +++ I +L
Sbjct: 210 PTLFPPPSRKTTLFRDRYNTVYQRLLRNESFQTSSSGRSLKRTSSFASNQCYKLTPIANL 269
Query: 174 VGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITT---GFFTENTIVVAEGEM 229
+G++G ++G++S G L DL S+ +DLS A++ +F IV
Sbjct: 270 LGRSGTSHLLLGLLSTSPTGELSLTDLTGSIALDLSHARMIPEDGAWFAPGMIV------ 323
Query: 230 LVDGIFQ--------------------------VITCGFPPLEDRDQSLKL--------- 254
LVDGI++ V CG PP E RD SL
Sbjct: 324 LVDGIYEEEETVRGSTLGGNSGVGGAIGGRFVGVSICG-PPCERRDVSLGTNNRNSAGEI 382
Query: 255 -----LAGYDFFGGGTLKKEDTLRLADLEKRAAND-----------MFVILSDIWLDNEE 298
DF G G+ ++ R+ ++ + D I+S++ LDN
Sbjct: 383 SSSGGFGWIDFLGVGS-ERARGPRMRQIQAKWLRDSNQGVEGHARLKVAIMSEVNLDNMR 441
Query: 299 VMGKLEVVLDGFE--SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAA 354
+ L + + + +E PS+F+ +GNF S+ + F L +++
Sbjct: 442 TLDGLRRLFNSYNHLPLEDRPSVFILIGNFVQKAVINGGTQAGSIEYKEYFDALATVLSE 501
Query: 355 HPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIPN--------- 398
L + S F+F+PG +D AG + +PR +P+ T +++ +
Sbjct: 502 FSALLQRSTFVFVPGDNDPWASAFSAGAACTIPRQGVPELFTSRVKRAFTSANAEINRSQ 561
Query: 399 -------AIFSSNPCRLNFLITVQ 415
AI++SNP RL F V
Sbjct: 562 TSEPPGEAIWTSNPSRLTFFGPVH 585
>gi|325093046|gb|EGC46356.1| DNA polymerase epsilon subunit B [Ajellomyces capsulatus H88]
Length = 747
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 180/410 (43%), Gaps = 78/410 (19%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
DS I++I AF + Y+ KK+F + +A + RDR+ +++Q
Sbjct: 157 DSSLNDTRRWIKIISAFEQHRPVYNINKKNFDIITSPPSLFPPPYQRANILRDRYNIIYQ 216
Query: 143 RVSRDQHFSRP---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
R+ R++ F P S S S ++++I +L+G+TG ++G++S G L D
Sbjct: 217 RILRNEAFRIPLQGSTSSHPSTTRSYKLTSIANLLGRTGTSHLLLGLLSMSPAGDLSLTD 276
Query: 199 LAASVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ------------------- 236
S+ +D++ A+ +F IV+ +G +G+
Sbjct: 277 PTGSIALDITHARAIPEDGAWFAPGMIVLVDGIYREEGVVTGSTLNGSGGVGGTIGGTFT 336
Query: 237 VITCGFPPLEDR-----------DQSLKLLAGY---DFFGGGTLKKEDTLRLADLEK--- 279
V + G PP E R D ++ + G+ DF G G+ ++ R+ +EK
Sbjct: 337 VASVGGPPCERRETSTGAGNRGGDDAMTVEGGFGWVDFLGVGS-ERGRGYRMRQVEKICL 395
Query: 280 --------RAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSH 329
R V++S++ LD + G L V + + S+ + +P +F+ +GNF H
Sbjct: 396 DKGPPYEQRDIRKRIVVMSEVNLDVPKTEGALTHVFECYASLPEQQLPLVFILIGNFVQH 455
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L +++ +PRL +++ F+F+PG +D +G ST +P
Sbjct: 456 AVISGGGSGGSIECKEYFDILASVLSNYPRLLQNATFVFVPGDNDPWASAYSSGSSTTVP 515
Query: 381 RCALPKYLTEELQ--------------KYIP-NAIFSSNPCRLNFLITVQ 415
R A+P T L+ K+ P A++SSNP RL+ V
Sbjct: 516 RDAIPDLFTSRLKRAFTHANNELPSRIKHTPGQAVWSSNPTRLSLFGPVH 565
>gi|341901720|gb|EGT57655.1| hypothetical protein CAEBREN_31221 [Caenorhabditis brenneri]
Length = 370
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 172/375 (45%), Gaps = 35/375 (9%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILS-FVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
R++I K +I + L+ +A+ + F+ + + +++ + ++ L+SS+I +E
Sbjct: 11 RREIIKTFQIHAFELKKEAVKLCVKLFLEHDKETRKKWTSKMIELLKKQT-LQSSLISEE 69
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
+ Q ++ D+G N V DAF + + Y+ + G +
Sbjct: 70 LIR---DTFRQCKSKGTQDAGKLLN-----VFDAFSLQPYDYEPELRKMILRKGKTTLAA 121
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
++++ + R RFLL+ QR +R S +F E S TIQS+V V+G
Sbjct: 122 DSASFSHASRQRFLLVKQRAARCA--SLKNFKFTTCELLSSSTKTIQSVV-------VLG 172
Query: 185 VISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
+++Q + +++EDL+ S+E++ + K F E+ I + EG + + V
Sbjct: 173 MLTQQKADCYHIEDLSGSIEVEFKEDTKFHHALFHEHCIAIFEGS-FENSVLHVNEVAMV 231
Query: 244 PLEDRDQSLKLLAGYDFFGGGTLKKEDTL------RLADLEKRAANDMFVILSDIWLDNE 297
P+E + + K L+ + + GG ED + RL + + + LSD++LD+
Sbjct: 232 PVESAEMTRKELSSNENWFGG----EDKIAFRCSERLRSALAKQEDTSIIFLSDVFLDDA 287
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
+ M L +L G++ + P + GNFCS P + L F L + +
Sbjct: 288 KSMKALNKLLIGYK--DQPPVAIILCGNFCSRPRQTD--TIDLLDRGFRYLANQLQQMKK 343
Query: 358 LKEHSRFLFIPGPDD 372
E ++F+F+PGPDD
Sbjct: 344 EYERTQFIFVPGPDD 358
>gi|341895998|gb|EGT51933.1| hypothetical protein CAEBREN_25197 [Caenorhabditis brenneri]
Length = 367
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 172/375 (45%), Gaps = 35/375 (9%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILS-FVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKE 64
R++I K +I + L+ +A+ + F+ + + +++ + ++ L+SS+I +E
Sbjct: 11 RREIIKTFQIHAFELKKEAVKLCVKLFLEHDKETRKKWTSKMIELLKKQT-LQSSLISEE 69
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHG 124
+ Q ++ D+G N V DAF + + Y+ + G +
Sbjct: 70 LIR---DTFRQCKSKGTQDAGKLLN-----VFDAFSLQPYDYEPELRKMVLRKGKTTLAA 121
Query: 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
++++ + R RFLL+ QR +R S +F E S TIQS+V V+G
Sbjct: 122 DSASFSHASRQRFLLVKQRAARCA--SLKNFKFTTCELLSSSTKTIQSVV-------VLG 172
Query: 185 VISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITCGFP 243
+++Q + +++EDL+ S+E++ + K F E+ I + EG + + V
Sbjct: 173 MLTQQKADCYHIEDLSGSIEVEFKEDTKFHHALFHEHCIAIFEGS-FENSVLHVNEVAMV 231
Query: 244 PLEDRDQSLKLLAGYDFFGGGTLKKEDTL------RLADLEKRAANDMFVILSDIWLDNE 297
P+E + + K L+ + + GG ED + RL + + + LSD++LD+
Sbjct: 232 PVESAEMTRKELSSNENWFGG----EDKIAFRCSERLRSALAKQEDTSIIFLSDVFLDDA 287
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPR 357
+ M L +L G++ + P + GNFCS P + L F L + +
Sbjct: 288 KSMKALNKLLIGYK--DQPPVAIIICGNFCSRPRQTD--TIDLLDRGFRYLANQLQQMKK 343
Query: 358 LKEHSRFLFIPGPDD 372
E ++F+F+PGPDD
Sbjct: 344 EYERTQFIFVPGPDD 358
>gi|451993337|gb|EMD85811.1| hypothetical protein COCHEDRAFT_1198754 [Cochliobolus
heterostrophus C5]
Length = 781
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 162/398 (40%), Gaps = 81/398 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF PK Y+ +KHF + + S K L+R R+ ++ QR+ R++ F
Sbjct: 206 MKVIGAFEQPKLIYNVNQKHFEKSTAKPSLFPNPSHKTELFRQRYHIVHQRILRNETFQA 265
Query: 153 PSFDVVN----SEFGSC------EISTIQSLVGQTGR-RWVMGVISQLEDGHFYLEDLAA 201
P+F S GS I+ I +L+G+TG ++G+++ G L DL
Sbjct: 266 PTFSTARSATLSRTGSIATSQMNTITPIANLLGRTGSTHLLLGMLTVSATGALSLSDLTG 325
Query: 202 SVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGI------------------FQVITC 240
++ +D+ A+ +F IV+ EG D F +
Sbjct: 326 TIALDIEHARPIPEKGAYFAPGMIVLVEGSYEEDSGAGSSLGGSGGIGGTIGGKFLCFSV 385
Query: 241 GFPPLEDRDQSL--------KLLAG-----YDFFG----GGTLKKEDTLRLADLEKRAAN 283
G PP E R +L LAG DF G GT + + + LE A+
Sbjct: 386 GHPPCERRTATLGGAEEVDKSSLAGPAFGWTDFLGVGSQRGTGARMNKIASKLLEPERAH 445
Query: 284 DMFVILSDIWLDNEEVMGKLEVVL-----DGFESVEVVPSLFVFMGNFCSHPCNLSFHSF 338
++ VI SD+ LD + L +L D ++ V P + +GNF S
Sbjct: 446 NI-VIASDLHLDVPSTLSALRTLLRTCTPDPTDAHPVYPLAIILIGNFSSKASLAGVPGT 504
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS-------TVLPRCALPKYLT 389
S+ + F L ++A L H+ + +PG +DA PS T LPR +P T
Sbjct: 505 GSIEYKEHFDALASVLADFQPLIAHTTLVLVPGDNDAWPSAFSAGAATPLPRKPIPNMFT 564
Query: 390 EELQKYIPNA-----------------IFSSNPCRLNF 410
++K + A I++SNP RL +
Sbjct: 565 TRIRKVVAEANREIWGPGKAKGKEGEVIWTSNPSRLTW 602
>gi|367005049|ref|XP_003687257.1| hypothetical protein TPHA_0I03220 [Tetrapisispora phaffii CBS 4417]
gi|357525560|emb|CCE64823.1| hypothetical protein TPHA_0I03220 [Tetrapisispora phaffii CBS 4417]
Length = 761
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 150/325 (46%), Gaps = 43/325 (13%)
Query: 128 AKAALYRDRFLLLFQRVSRDQHFSR-----PSFDVVNSE-----------FGSCEISTIQ 171
+K A++ R+ LL R+ R++ F P +VN + + ++ I+
Sbjct: 280 SKLAIFSTRYYLLRDRIMRNEAFQNNDSFNPLSSMVNMKNALQNNDKSELISNMSLTPIK 339
Query: 172 SLVGQTGRRW-VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEM 229
+L+G+ G+ + ++G++ G++ LED + +E+DLS+ T G ++ IV+ EG
Sbjct: 340 TLLGRNGQNFLILGMLRVNAKGNWCLEDPSGDIEVDLSQTLPTAGLYYVPGAIVLTEGIY 399
Query: 230 L-VDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG---------GGTLKKEDTLRLADLEK 279
F V + PP E RD +L+ + D G L + +RL LEK
Sbjct: 400 YSATNTFHVTSMTHPPCERRDVTLEAIGNIDLLGIHGISTPNYIAKLDDDLKIRLHYLEK 459
Query: 280 RAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSF 338
+ F I+ D++L+ + + L V E P + + G+F S P + S +S
Sbjct: 460 DFTDHRFAIMGGDMFLNELQTLSALRKVFSKLN--EDPPIMIILQGSFSSTPVHASTNSK 517
Query: 339 S-SLRLQ----FGKLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPK 386
S S+ Q F L +++ L +S FLFIPG +D G + + P+ +P
Sbjct: 518 SMSISTQYKNNFDSLASLLSEFEDLINYSTFLFIPGVNDPWSSMVTLGSTGLWPQKPIPN 577
Query: 387 YLTEELQKYIPNAIFSSNPCRLNFL 411
+ T + + + I+ SNP R+ +L
Sbjct: 578 HFTTRINRICRHVIWGSNPTRIAYL 602
>gi|238880358|gb|EEQ43996.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 708
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 69/348 (19%)
Query: 133 YRDRFLLLFQRVSRDQHFSRPSF---DVVNS-------EFGSCEISTIQSLVGQTGRRW- 181
+ +R+ LL R+SR+++F + S +NS EIS I++++G+ G+++
Sbjct: 206 FNNRYYLLSDRLSRNENFQKKSLISLSALNSFKEGKTDSITGHEISLIKNMLGRDGQKFL 265
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEG------------E 228
+ G++S+ + + LED +E++LS+A + G F+ ++ EG
Sbjct: 266 IFGLLSKNANDEYTLEDETDHIELNLSQAFKSQGLFYCPGMFLLVEGIYSASGGNSNQDH 325
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG------------GTLKKEDTLRLAD 276
+ G F V G PP E R+ SL + DF G + K+ RL
Sbjct: 326 GYIGGCFYVSNIGHPPSERRETSLDVYGNLDFLGMHRQIAPVTGEKITKISKKFKKRLVL 385
Query: 277 LEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEV---------------VPSLF 320
+EK N + + +D++LD+ +V+ L E+ + +P
Sbjct: 386 IEKTLYNHKLIFVGTDLYLDDFKVLDGLRKFFQKLENSIIESIEDEEGQMAEGTNIPLAL 445
Query: 321 VFMGNFCSHPCNLSFHSFS------SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
VF G+F S P +++ S + S + F +++ +P + + + IPG +D
Sbjct: 446 VFTGSFVSKPLSVTNSSVTNITNSESYKSNFDNFTTIVSKYPNIVSRCKIILIPGKNDPW 505
Query: 375 PST---------VLPRCALPKYLTEELQKYIP--NAIFSSNPCRLNFL 411
ST P+ ++PK L+K +P N + S NP R+N+L
Sbjct: 506 QSTYSLGSSSLNYFPQSSIPKVFINRLEKLLPKGNLVVSWNPTRINYL 553
>gi|68473041|ref|XP_719326.1| potential DNA polymerase epsilon subunit [Candida albicans SC5314]
gi|46441139|gb|EAL00438.1| potential DNA polymerase epsilon subunit [Candida albicans SC5314]
Length = 708
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 154/348 (44%), Gaps = 69/348 (19%)
Query: 133 YRDRFLLLFQRVSRDQHFSRPSF---DVVNS-------EFGSCEISTIQSLVGQTGRRW- 181
+ +R+ LL R+SR+++F + S +NS EIS I++++G+ G+++
Sbjct: 206 FNNRYYLLSDRLSRNENFQKKSLISLSALNSFKEGKTDSITGHEISLIKNMLGRDGQKFL 265
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEG------------E 228
+ G++S+ + + LED +E++LS+A + G F+ ++ EG
Sbjct: 266 IFGLLSKNANDEYTLEDETDHIELNLSQAFKSQGLFYCPGMFLLVEGIYSASGGNSNQDH 325
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG------------GTLKKEDTLRLAD 276
+ G F V G PP E R+ SL + DF G + K+ RL
Sbjct: 326 GYIGGCFYVSNIGHPPSERRETSLDVYGNLDFLGMHRQIAPVTGEKITKISKKFKKRLVL 385
Query: 277 LEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEV---------------VPSLF 320
+EK N + + +D++LD+ +V+ L E+ + +P
Sbjct: 386 IEKTLYNHKLIFVGTDLYLDDFKVLDGLRKFFQKLENSIIESIEDEEGQMAEGTNIPLAL 445
Query: 321 VFMGNFCSHPCNLSFHSFS------SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
VF G+F S P +++ S + S + F +++ +P + + + IPG +D
Sbjct: 446 VFTGSFVSKPLSVTNSSVTNITNSESYKSNFDNFTTIVSKYPNIVSRCKIILIPGKNDPW 505
Query: 375 PST---------VLPRCALPKYLTEELQKYIP--NAIFSSNPCRLNFL 411
ST P+ ++PK L+K +P N + S NP R+N+L
Sbjct: 506 QSTYSLGSSSLNYFPQSSIPKVFINRLEKLLPKGNLVVSWNPTRINYL 553
>gi|226292339|gb|EEH47759.1| DNA polymerase epsilon subunit B [Paracoccidioides brasiliensis
Pb18]
Length = 744
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 179/402 (44%), Gaps = 80/402 (19%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
IRV+ AF + Y+ KK+F + AS +A ++RDR+ L++QR+ R++ F
Sbjct: 162 IRVVSAFEQNRPVYNVNKKNFDIITTPPSLFPSASQRANIFRDRYNLIYQRLLRNEAFQI 221
Query: 153 P---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLS 208
P S +S S ++++I +L+G++G ++G+++ G + D S+ +D+
Sbjct: 222 PLQQSNSSHSSASRSYKVTSIANLLGRSGTSHLLLGLLAVSPAGELSISDPTGSITLDIR 281
Query: 209 KAKITT---GFFTENTIVVAEG----EMLVDGI---------------FQVITCGFPPLE 246
A+ +FT IV+A+G E +V G F V + G PP E
Sbjct: 282 DARAVPEDGAWFTPGMIVLADGVYREEEVVSGSTLTGSGGVGGTIGGKFIVASVGGPPCE 341
Query: 247 DR------------DQSLKLLAGY---DFFGGGTLKKEDTLRLADLEK-----------R 280
R D + + G+ DF G G+ ++ R+ +EK
Sbjct: 342 RREVSSGAAHHRVADGDMTVEGGFGWVDFLGVGS-ERSRGPRMRQIEKICLHKGQPEEQE 400
Query: 281 AANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSF 338
V++ ++ LD + + L V + S +P +F+ +GNF H S
Sbjct: 401 KVRKQIVVMGEVNLDVPKTVEALSYVFQSYTSFPEHQIPLVFILIGNFLQHALMSGGGSS 460
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLT 389
S+ + F L +++ +PRL ++S F+F+PG +D AG ST PR A+P T
Sbjct: 461 GSIECKEYFDILASVLSKYPRLLQNSTFVFVPGDNDPWASAYSAGASTTSPRDAIPDLFT 520
Query: 390 EELQK---------YIPN-------AIFSSNPCRLNFLITVQ 415
+++ +PN AI++SNP RL+ V
Sbjct: 521 SRVKRAFTNANNVHQLPNSRHTPGQAIWTSNPTRLSLFGPVH 562
>gi|425772770|gb|EKV11158.1| DNA polymerase epsilon subunit B, putative [Penicillium digitatum
Pd1]
gi|425773561|gb|EKV11908.1| DNA polymerase epsilon subunit B, putative [Penicillium digitatum
PHI26]
Length = 750
Score = 101 bits (252), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 111/449 (24%), Positives = 189/449 (42%), Gaps = 85/449 (18%)
Query: 52 HESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNH--SAIRVIDAFLVPKFRYDSI 109
+ SLK+S + + T+ + A+ D H + ++VIDAF +P+ Y+
Sbjct: 138 QDGSLKASTLGVDDGRVETAGNTSKQGTAQEDDAQLPLHPRNWLKVIDAFDLPRLTYNVD 197
Query: 110 KKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR-------PSFDVVNSEF 162
KK+F + S K AL+RDR+ L++QR+ R++ F PS +S
Sbjct: 198 KKYFEVIRSRPSLFPSPSCKTALFRDRYNLVYQRLLRNESFQSSLGVAGVPSLRRSSSNL 257
Query: 163 G---SCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITT---G 215
S +++ I +L+G+TG ++G++ G L DL SV +DLS A++
Sbjct: 258 AHRQSYKMTPIANLLGRTGTSHLLLGLLGISPTGDLSLVDLTGSVALDLSHARMIPEDGA 317
Query: 216 FFTENTIVVAEG-----EML--------------VDGIFQVITCGFPPLEDRDQSL---- 252
+F IV+ +G EM+ + G F I+ PP E RD SL
Sbjct: 318 WFAPGMIVLVDGIYEEEEMVKGAALGGNTGIGGAIGGQFVGISICGPPCERRDISLGTSN 377
Query: 253 ----------KLLAGYDFFGGGTLK---------KEDTLRLADLEKRAANDMFVILSDIW 293
DF G G+ + +E LR I+S++
Sbjct: 378 LHGSGQLSSSGGFGWVDFLGLGSERAQGARMRRIQEKCLRGDQEAPETIRLKVAIMSEVN 437
Query: 294 LDNEEVMGKLEVVLDGFE--SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLG 349
LDN + + L+ V + + S+ P F+ +GNF S+ + F L
Sbjct: 438 LDNMKTLDALKKVFNTYNDLSLHERPLAFLLIGNFAQKAIISGGGRAGSIEYKEYFDSLA 497
Query: 350 QMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIP----- 397
+++ P L +HS F+F+PG +D G ++ +PR +P+ T +++
Sbjct: 498 LVLSDFPALLQHSTFVFVPGDNDPWASAFSAGAASTVPRQPIPELFTSRVRRAFATANSE 557
Query: 398 -----------NAIFSSNPCRLNFLITVQ 415
+AI++SNP RL++ V
Sbjct: 558 LNRSQNPTPAGDAIWTSNPARLSWFGPVH 586
>gi|225680664|gb|EEH18948.1| DNA polymerase epsilon subunit B [Paracoccidioides brasiliensis
Pb03]
Length = 744
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 179/402 (44%), Gaps = 80/402 (19%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
IRV+ AF + Y+ KK+F + AS +A ++RDR+ L++QR+ R++ F
Sbjct: 162 IRVVSAFEQNRPVYNVNKKNFDIITTPPSLFPSASQRANIFRDRYNLIYQRLLRNEAFQI 221
Query: 153 P---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLS 208
P S +S S ++++I +L+G++G ++G+++ G + D S+ +D+
Sbjct: 222 PLQQSNSSHSSASRSYKVTSIANLLGRSGTSHLLLGLLAVSPAGELSISDPTGSITLDIR 281
Query: 209 KAKITT---GFFTENTIVVAEG----EMLVDGI---------------FQVITCGFPPLE 246
A+ +FT IV+A+G E +V G F V + G PP E
Sbjct: 282 DARAVPEDGAWFTPGMIVLADGVYREEEVVSGSTLTGSGGVGGTIGGKFIVASVGGPPCE 341
Query: 247 DR------------DQSLKLLAGY---DFFGGGTLKKEDTLRLADLEK-----------R 280
R D + + G+ DF G G+ ++ R+ +EK
Sbjct: 342 RREVSSGAAHHRGADGHMTVEGGFGWVDFLGVGS-ERSRGPRMRQIEKICLHKGQPEEHE 400
Query: 281 AANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSF 338
V++ ++ LD + + L V + S +P +F+ +GNF H S
Sbjct: 401 KVRKQIVVMGEVNLDVPKTVEALSYVFQSYTSFPEHQIPLVFILIGNFLQHALMSGGGSS 460
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLT 389
S+ + F L +++ +PRL ++S F+F+PG +D AG ST PR A+P T
Sbjct: 461 GSIECKEYFDILASVLSKYPRLLQNSTFVFVPGDNDPWASAYSAGASTTSPRDAIPDLFT 520
Query: 390 EELQK---------YIPN-------AIFSSNPCRLNFLITVQ 415
+++ +PN AI++SNP RL+ V
Sbjct: 521 SRVKRAFTNANNVHQLPNSRHTPGQAIWTSNPTRLSLFGPVH 562
>gi|295673158|ref|XP_002797125.1| DNA polymerase epsilon subunit B [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226282497|gb|EEH38063.1| DNA polymerase epsilon subunit B [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 744
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 177/402 (44%), Gaps = 80/402 (19%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
IRV+ AF + Y+ KK+F + AS +A ++RDR+ L++QR+ R++ F
Sbjct: 162 IRVVSAFEQNRPVYNVNKKNFDIITTPPSLFPSASQRANIFRDRYNLIYQRLLRNEAFQI 221
Query: 153 P---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLS 208
P S +S S ++++I +L+G++G ++G++S G + D S+ +D+
Sbjct: 222 PLQQSNSSHSSANRSYKVTSIANLLGRSGTSHLLLGLLSVSPAGELSISDPTGSITLDIR 281
Query: 209 KAKITT---GFFTENTIVVAEG----EMLVDGI---------------FQVITCGFPPLE 246
A+ +FT IV+A+G E +V G F V + G PP E
Sbjct: 282 DARAVPEDGSWFTPGMIVLADGVYREEEVVSGSTLTGSGGVGGTIGGKFIVASVGGPPCE 341
Query: 247 DR------------DQSLKLLAGY---DFFGGGTLKKEDTLRLADLEK-----------R 280
R D + + G+ DF G G+ ++ R+ +EK
Sbjct: 342 RREVSSGAAHHRGADGDMSVEGGFGWVDFLGVGS-ERSRGPRMRQIEKICLHKGQPEEQE 400
Query: 281 AANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSF 338
V++ ++ LD + + L V + S +P +F+ +GNF S
Sbjct: 401 KVRKQIVVMGEVNLDVPKTVEALSYVFQSYTSFPEHQMPLVFILIGNFFQDALMSGGGSS 460
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLT 389
+ + F L +++ +PRL ++S F+F+PG +D AG ST PR A+P T
Sbjct: 461 GGIECKEYFDILASVLSKYPRLLQNSTFVFVPGDNDPWASAYSAGASTTSPRDAIPDLFT 520
Query: 390 EELQK---------YIPN-------AIFSSNPCRLNFLITVQ 415
+++ +PN AI++SNP RL+ V
Sbjct: 521 SRVKRAFTNANNAHQLPNSRHTPGQAIWTSNPTRLSLFGPVH 562
>gi|340520393|gb|EGR50629.1| hypothetical protein TRIREDRAFT_58184 [Trichoderma reesei QM6a]
Length = 783
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 105/421 (24%), Positives = 173/421 (41%), Gaps = 89/421 (21%)
Query: 74 LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALY 133
L + AE D + + ++VIDA+ P+ Y+ KKHF + + AS K ++
Sbjct: 190 LGVQEEAEDDDEANDARAWLKVIDAYEQPRLIYNVDKKHFERDTAKPSLLPPASHKTTVF 249
Query: 134 RDRFLLLFQRVSRDQHFSRPSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMG 184
R+R+ ++ QR+ R++ F S S S +I+ I +L+G+ G ++G
Sbjct: 250 RNRYHVIHQRLLRNESFQTSSVTSSRKHTLHRSLSNQQSLKITPIANLLGRHGSNHMLLG 309
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM-LVDGI--------- 234
++ L G + DL ++ +DLS+A E++ G M LVDG+
Sbjct: 310 QLNLLPTGDLAISDLTGTIALDLSQAVA----IPEDSAWFCPGMMVLVDGVYGEEEESIG 365
Query: 235 ----------------FQVITCGFPPLEDRDQSLKLLA--------------GY-DFFGG 263
FQ G PP E R +L + G+ DF G
Sbjct: 366 KGLSGSSGVGGTLGGRFQGFFIGQPPCEKRKATLGITGVDSADHDQTIGGGFGWIDFLGV 425
Query: 264 GTLKKEDTLRLADLEKR----------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--E 311
G+ + + ++ LE+R + + VI+ +I LD + L +L + E
Sbjct: 426 GSERAVGS-KMRRLERRLLQPAPEPDMPSRNRVVIIGEINLDQPRALQALRKILSLYAAE 484
Query: 312 SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPG 369
P FV GNF H S S+ + F L + P L + S F+F+PG
Sbjct: 485 PEGTSPLTFVLAGNFTQHAVMARGGSGGSIEYKEYFDALASTFSDFPTLLQSSTFVFVPG 544
Query: 370 PDD-------AGPSTVLPRCALPKYLTEELQKYIP-------------NAIFSSNPCRLN 409
+D AG S LPR +P+ T +++ +AI++SNP RL+
Sbjct: 545 DNDGWVSSFTAGASVPLPRKPVPEMFTSRIRRAFATANAEAGNTGVQGSAIWTSNPSRLS 604
Query: 410 F 410
Sbjct: 605 L 605
>gi|240279915|gb|EER43420.1| DNA polymerase epsilon subunit B [Ajellomyces capsulatus H143]
Length = 644
Score = 101 bits (251), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 179/410 (43%), Gaps = 78/410 (19%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
DS I++I AF + Y+ KK+F + +A + RDR+ +++Q
Sbjct: 54 DSSLNDTRRWIKIISAFEQHRPVYNINKKNFDIITSPPSLFPPPYQRANILRDRYNIIYQ 113
Query: 143 RVSRDQHFSRP---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
R+ R++ F P S S S ++++I +L+G+TG ++G++S G L D
Sbjct: 114 RILRNEAFRIPLQGSTSSHPSTTRSYKLTSIANLLGRTGTSHLLLGLLSMSPAGDLSLTD 173
Query: 199 LAASVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ------------------- 236
S+ +D++ A+ +F IV+ +G +G+
Sbjct: 174 PTGSIALDITHARAIPEDGAWFAPGMIVLVDGIYREEGVVTGSTLNGSGGVGGTIGGTFT 233
Query: 237 VITCGFPPLEDR-----------DQSLKLLAGY---DFFGGGTLKKEDTLRLADLEK--- 279
V + G PP E R D ++ + G+ DF G G+ ++ R+ +EK
Sbjct: 234 VASVGGPPCERRETSTGAGNRGGDDAMTVEGGFGWVDFLGVGS-ERGRGYRMRQVEKICL 292
Query: 280 --------RAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSH 329
R V++S++ LD + G L V + S+ + +P +F+ +GNF H
Sbjct: 293 DKGPPYEQRDIRKRIVVMSEVNLDVPKTEGALTHVFGCYASLPEQQLPLVFILIGNFVQH 352
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L +++ +PRL +++ F+F+PG +D +G ST +P
Sbjct: 353 AVISGGGSGGSIECKEYFDILASVLSNYPRLLQNATFVFVPGDNDPWASAYSSGSSTTVP 412
Query: 381 RCALPKYLTEELQ--------------KYIP-NAIFSSNPCRLNFLITVQ 415
R A+P T L+ K+ P A++SSNP RL+ V
Sbjct: 413 RDAIPDLFTSRLKRAFTHANNELPSRIKHTPGQAVWSSNPTRLSLFGPVH 462
>gi|407928266|gb|EKG21128.1| DNA polymerase alpha/epsilon subunit B [Macrophomina phaseolina
MS6]
Length = 791
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/413 (23%), Positives = 163/413 (39%), Gaps = 88/413 (21%)
Query: 85 GSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRV 144
GS I+VI F PK Y+ KKHF + + S K ++R R+ ++ QR+
Sbjct: 194 GSKDPRDWIKVIGGFDQPKMVYNVTKKHFDRSTAKQTLFPNPSLKTEMFRQRYHIIHQRL 253
Query: 145 SRDQHFSRPSFDVVNSEFGSC---------EISTIQSLVGQTG-RRWVMGVISQLEDGHF 194
R++ F P+F S +I+ I +L+G+ G ++G+++ G
Sbjct: 254 LRNEAFQTPTFAGNRSSLQRSASMSISQINKITPISNLLGRHGSNHLLLGLLTVSPTGTL 313
Query: 195 YLEDLAASVEIDLSKAKITT---GFFTENTIVVAEGEMLVD------------------- 232
L DL S+ +D++ A+ +F+ IV+ +G D
Sbjct: 314 ALSDLTGSIALDVTHARPIPEDGAWFSPGMIVLVDGTYEEDYGNPHSGSASSLGATGGIG 373
Query: 233 ----GIFQVITCGFPPLEDRDQSL-----------------KLLAGYDFFGGGTLKKEDT 271
G F + G PP E R +L DF G G+ ++
Sbjct: 374 GTIGGKFISFSIGHPPPEKRSLTLGTPDSSTVTDPNGGVVGPAFGWTDFLGTGS-ERATG 432
Query: 272 LRLADLEKRAAN--------DMFVILSDIWLDNEEVMGKLEVVLDGFESVEV--VPSLFV 321
R+ +E R N I +DI LDN + L +L + ++ + P V
Sbjct: 433 ARMRRIENRLLNADSPAHRQTKIAIAADINLDNPQSFTALRTLLSTYSALPIPEFPLAIV 492
Query: 322 FMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV- 378
MGNF + S+ + F L ++A P+L + +F+PG +DA PS
Sbjct: 493 LMGNFVTSATMAGVPGQGSIEYKEHFNALASVLADFPQLIARTTLVFVPGDNDAWPSAFS 552
Query: 379 ------LPRCALPKYLTEELQKYIP---------------NAIFSSNPCRLNF 410
LPR A+P+ T +++ I AI+++NP RL +
Sbjct: 553 AGAAVPLPRKAVPEIFTSRIKRVIQEANREVGGAGKRKEGEAIWTTNPSRLTW 605
>gi|410075784|ref|XP_003955474.1| hypothetical protein KAFR_0B00390 [Kazachstania africana CBS 2517]
gi|372462057|emb|CCF56339.1| hypothetical protein KAFR_0B00390 [Kazachstania africana CBS 2517]
Length = 693
Score = 101 bits (251), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/362 (27%), Positives = 167/362 (46%), Gaps = 50/362 (13%)
Query: 94 RVIDAFLVPKFRYDSIK---KHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF 150
+VI+A KF YD IK + Q+ +LP ++ R+ ++ RV R++ F
Sbjct: 176 KVINAQSQQKFSYDPIKMQLRFMPQNKANLP---SIKDNVEMFSTRYNIVKDRVMRNEMF 232
Query: 151 S-RPSFDVV--------------NSEFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHF 194
+F+ + NS I+ I++L+G+ G+ +++ G++ + G +
Sbjct: 233 QGNDTFNPLSSMMKLKEDLNNESNSMSSYMSITQIKNLLGRDGKNFLLLGLLRKNNRGSW 292
Query: 195 YLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEML-VDGIFQVITCGFPPLEDRDQSL 252
LED + ++EID+S+ T G ++ E IV+ EG V F + PP E R+ +L
Sbjct: 293 ALEDPSGTIEIDISQTIPTNGLYYFEGCIVLVEGIYFSVGNRFHASSMTHPPGERREATL 352
Query: 253 KLLAGYDFFG------GGTLKKEDT---LRLADLEKRAANDMFVILS-DIWLDNEEVMGK 302
+ D G + K D +RL LEK + FVIL D++LD
Sbjct: 353 DKIGHLDLLGIHGSSNANYMAKLDNNLKIRLHYLEKELEDHRFVILGGDLFLDK---FIT 409
Query: 303 LEVVLDGFESV-EVVPSLFVFMGNFCSHPCNLSFHSFS-----SLRLQFGKLGQMIAAHP 356
LE + F+ + + P++ VF G+F S P + S S S + F L +++
Sbjct: 410 LEALRKTFKKLNDDPPTVIVFQGSFTSVPVHTSVTSKSISSSTQYKNNFDTLAALLSEFE 469
Query: 357 RLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
+K S +FIPG +D G S LP+ +P + T+ + + I+ SNP R+
Sbjct: 470 NIKNDSILIFIPGANDPWGSMHSLGASGSLPQKPIPSFFTQRISRVCKRVIWGSNPMRIA 529
Query: 410 FL 411
+L
Sbjct: 530 YL 531
>gi|398023201|ref|XP_003864762.1| DNA polymerase epsilon subunit b, putative [Leishmania donovani]
gi|322502998|emb|CBZ38082.1| DNA polymerase epsilon subunit b, putative [Leishmania donovani]
Length = 552
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 180/425 (42%), Gaps = 31/425 (7%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSII 61
+ + +I+K + Y L+ A+ SF+ ++ E+ DLL D F E + ++
Sbjct: 3 EPKDEIRKFAQAYKYNLKPLAVSRFASFLKKYDTGEEYRRDLLRDLFSLIGEQCCDNRLV 62
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
D+ V S+ EA +G G+ + S+++V+ VPK D + + S+
Sbjct: 63 DELKAEAVISL---QEAKIKGCLGTDGS-SSVQVVSLGAVPKVFVDEVSNELRVSSSSVA 118
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG-QTGRR 180
++ + R+ L +R R + + S D GS + I +L G G +
Sbjct: 119 LN-----RLQCLNQRYALARRRCLRCGLYHK-SVDQHAQHDGSLALLPISALEGLDPGLQ 172
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLS-KAKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
+ + ++D +LEDL +++ S ++++T F N + V+G QV
Sbjct: 173 VAVLGLLVVQDDEVFLEDLRGQIKLKFSEQSRVTPHGFVGNGFLTVVSGFWVNGTLQVTR 232
Query: 240 CGFPPLEDRDQSLK-LLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
PP E R+ +L+ + D FG + LR EK+ + ++++ + LD
Sbjct: 233 VDLPPAERREVTLRDAGSSMDLFGLAPPNPMEALRE---EKKRVQSVIIVMAHVHLDKAG 289
Query: 299 VMGKLEVV---LDGFESVEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFGK 347
M KL + G E+ FVF G+F S P + F + ++
Sbjct: 290 TMSKLARFFERMQGLSESELRDVTFVFTGDFSSFPLHFGDASHLPDIFDNSDRFQILLDG 349
Query: 348 LGQMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNP 405
LG+ IAA+ P +HS F+ IPGP D P+ + + ++ + NP
Sbjct: 350 LGRCIAANAPTAAQHSHFVLIPGPSDMTALQGFQPQTPIATQFAKGVESRTKKLTLAPNP 409
Query: 406 CRLNF 410
CRL F
Sbjct: 410 CRLRF 414
>gi|45190339|ref|NP_984593.1| AEL267Cp [Ashbya gossypii ATCC 10895]
gi|74693960|sp|Q758V1.1|DPB2_ASHGO RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|44983235|gb|AAS52417.1| AEL267Cp [Ashbya gossypii ATCC 10895]
gi|374107808|gb|AEY96715.1| FAEL267Cp [Ashbya gossypii FDAG1]
Length = 677
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/371 (26%), Positives = 169/371 (45%), Gaps = 57/371 (15%)
Query: 94 RVIDAFLVPKFRYDSIKKHF----YQHAGSLPIHG-----EASAKAALYRDRFLLLFQRV 144
+VID F +F YD K+ + + + + P+ A A + R+ L+ RV
Sbjct: 153 KVIDTFSQQQFTYDVTKRRYRLVQQRESAAGPLSTLLRIPSLEANLAQFPTRYHLVRDRV 212
Query: 145 SRDQHFSRPSFDVVN-------------------SEFGSCEISTIQSLVGQTGRRWVM-G 184
R+ F + DV N + I+ I++L+G+ G+ +++ G
Sbjct: 213 LRNASFQ--NDDVYNPLSSMQQLQQQLDAGGAPLASTAYMSITQIKNLLGRDGKNFLLLG 270
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDG-IFQVITCGF 242
+I + G + LED + S+EID+S+ T G ++ IV+AEG G F+V +
Sbjct: 271 LIRKDSKGFWSLEDPSGSIEIDISETYPTKGTYYVPGCIVLAEGIYSSAGNRFRVSSITH 330
Query: 243 PPLEDRDQSLKLLAGYDFFG--GGT-------LKKEDTLRLADLEKRAANDMFVILS-DI 292
PP E R+ L+ + D G G + L KE +RL LEK + FV L +I
Sbjct: 331 PPGERREAFLEAIGNLDLLGIHGPSNESYISRLDKELKIRLHYLEKELTDHRFVFLGGNI 390
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC-----NLSFHSFSSLRLQFGK 347
+LD+ L + D E P++ V G+F S P + S S ++ R F
Sbjct: 391 FLDDTMTETALAKLFDVLEHDP--PTVLVLPGSFTSTPIYPSSDSKSSSSTAAYRANFDA 448
Query: 348 LGQMIAAHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIPNAI 400
L ++++ + RL + F+FIPG +D G + LP+ +P ++ + + +
Sbjct: 449 LAKLLSKYERLINETTFVFIPGDNDPWGSMAYLGVAGTLPQHPIPGDFVTKVNRICKHVV 508
Query: 401 FSSNPCRLNFL 411
+ SNP R+ +L
Sbjct: 509 WGSNPTRIAYL 519
>gi|225563089|gb|EEH11368.1| DNA polymerase epsilon subunit B [Ajellomyces capsulatus G186AR]
Length = 748
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 181/410 (44%), Gaps = 78/410 (19%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
DS I++I AF + Y+ KK+F + +A + RDR+ +++Q
Sbjct: 157 DSSLNDTRRWIKIISAFEQHRPVYNINKKNFDIITSPPSLFPPPYQRANILRDRYNIIYQ 216
Query: 143 RVSRDQHFSRP---SFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
R+ R++ F P S +S S ++++I +L+G+TG ++G++S G L D
Sbjct: 217 RILRNEAFRIPLQGSTSSHSSTTRSYKLTSIANLLGRTGTSHLLLGLLSMSPAGDLSLTD 276
Query: 199 LAASVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ------------------- 236
S+ +D++ A+ +F IV+ +G +G+
Sbjct: 277 PTGSIALDITHARAIPEDGAWFAPGMIVLVDGIYREEGVVTGSTLNGSGGVGGTIGGTFT 336
Query: 237 VITCGFPPLEDR-----------DQSLKLLAGY---DFFGGGTLKKEDTLRLADLEK--- 279
V + G PP E R D ++ + G+ DF G G+ ++ R+ +EK
Sbjct: 337 VASVGGPPCERRETSTGAGNRGGDDAMTVEGGFGWVDFLGVGS-ERGRGYRMRQVEKICL 395
Query: 280 --------RAANDMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSH 329
R V++S++ LD + G L V + + S+ + +P +F+ +GNF H
Sbjct: 396 DKGPPYEQRDIRKRIVVMSEVNLDVPKTEGALTHVFECYASLPEQQLPLVFILIGNFVQH 455
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L +++ +PRL +++ F+F+PG +D AG ST +P
Sbjct: 456 AVISGGGSGGSIECKEYFDILASVLSNYPRLLQNATFVFVPGDNDPWASAYSAGSSTTVP 515
Query: 381 RCALPKYLTEELQ--------------KYIP-NAIFSSNPCRLNFLITVQ 415
R A+P T L+ K+ P A++SSNP RL+ V
Sbjct: 516 RDAIPDLFTSRLKRAFTHANNELPSRIKHTPGQAVWSSNPTRLSLFGPVH 565
>gi|146100984|ref|XP_001468998.1| putative DNA polymerase epsilon subunit b [Leishmania infantum
JPCM5]
gi|134073367|emb|CAM72093.1| putative DNA polymerase epsilon subunit b [Leishmania infantum
JPCM5]
Length = 552
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 179/425 (42%), Gaps = 31/425 (7%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSII 61
+ + +I+K + Y L+ A+ SF+ ++ E+ DLL D F E + ++
Sbjct: 3 EPKDEIRKFAQAYKYNLKPLAVSRFASFLKKYDTGEEYRRDLLRDLFSLIGEQCCDNRLV 62
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
D+ V S+ EA +G G+ S+++V+ VPK D + + S+
Sbjct: 63 DELKAEAVISL---QEAKIKGCLGT-DGPSSVQVVSLGAVPKVFVDEVSNELRVSSSSVA 118
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG-QTGRR 180
++ + R+ L +R R + + S D GS + I +L G G +
Sbjct: 119 LN-----RLQCLNQRYALARRRCLRCGLYHK-SVDQHAQHDGSLALLPISALEGLDPGLQ 172
Query: 181 WVMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVIT 239
+ + ++D +LEDL +++ S+ +++T F N + V+G QV
Sbjct: 173 VAVLGLLVVQDDEVFLEDLRGQIKLKFSEESRVTPHGFVGNGFLTVVSGFWVNGTLQVTR 232
Query: 240 CGFPPLEDRDQSLK-LLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEE 298
PP E R+ +L+ + D FG + LR EK+ + ++++ + LD
Sbjct: 233 VDLPPAERREVTLRDAGSSMDLFGLAPPNPMEALRE---EKKRVQSVIIVMAHVHLDKAG 289
Query: 299 VMGKLEVV---LDGFESVEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFGK 347
M KL + G E+ FVF G+F S P + F + ++
Sbjct: 290 TMSKLARFFERMQGLSESELRDVTFVFTGDFSSFPLHFGDASHLPDIFDNSDRFQILLDG 349
Query: 348 LGQMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNP 405
LG+ IAA+ P +HS F+ IPGP D P+ + + ++ + NP
Sbjct: 350 LGRCIAANAPTAAQHSHFVLIPGPSDMTALQGFQPQTPIATQFAKGVESRTKKLTLAPNP 409
Query: 406 CRLNF 410
CRL F
Sbjct: 410 CRLRF 414
>gi|255954821|ref|XP_002568163.1| Pc21g11310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589874|emb|CAP96028.1| Pc21g11310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 762
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 179/424 (42%), Gaps = 85/424 (20%)
Query: 77 EAAAEGDSGSASNHSA--IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYR 134
+ AE D S H ++V+DAF +P+ Y+ KK+F + + K AL+R
Sbjct: 175 QGTAEEDDTQLSLHPRRWLKVVDAFDLPRLTYNVDKKYFEAVKSKPSLFPSPAYKTALFR 234
Query: 135 DRFLLLFQRVSRDQHFSR-------PSFDVVNSEFG---SCEISTIQSLVGQTG-RRWVM 183
DR+ L++QR+ R++ F PS +S S +++ I +L+G++G ++
Sbjct: 235 DRYNLVYQRLLRNESFQSSLGVAGVPSLQRSSSNLAHRQSYKLTPIANLLGRSGTSHLLL 294
Query: 184 GVISQLEDGHFYLEDLAASVEIDLSKAKITT---GFFTENTIVVAEG-----EML----- 230
G+++ G L DL SV +DLS A++ +F IV+ +G EM+
Sbjct: 295 GLLAISPTGDLSLVDLTGSVALDLSHARMIPEDGAWFAPGMIVLVDGIYEEEEMVKGAAL 354
Query: 231 ---------VDGIFQVITCGFPPLEDRDQSL--------------KLLAGYDFFGGGTLK 267
+ G F I+ PP E RD SL DF G G+ +
Sbjct: 355 GGNTGVGGAIGGQFVGISICGPPCERRDISLGTSNRHGSGQLSSSGGFGWVDFLGLGSER 414
Query: 268 ---------KEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFE--SVEVV 316
+E LR I+S++ LDN + + L+ V + S+
Sbjct: 415 AQGARMRRIQEKCLRGDQDAPETTRLKVAIMSEVNLDNMKTLDALKKVFGTYNDLSLRER 474
Query: 317 PSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA- 373
P F+ +GNF S+ + F L +++ P L +HS F+F+PG +D
Sbjct: 475 PQAFILIGNFAQKAIISGGGRAGSIEYKEYFDSLALVLSDFPALLQHSTFVFVPGDNDPW 534
Query: 374 ------GPSTVLPRCALPKYLTEELQKYIP----------------NAIFSSNPCRLNFL 411
G ++ +PR +P+ T +++ +AI++SNP RL++
Sbjct: 535 ASAFSAGAASTVPRQPIPELFTSRVRRAFATANAELNRSQTAEPAGDAIWTSNPARLSWF 594
Query: 412 ITVQ 415
V
Sbjct: 595 GPVH 598
>gi|451850205|gb|EMD63507.1| hypothetical protein COCSADRAFT_26856 [Cochliobolus sativus ND90Pr]
Length = 783
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 101/398 (25%), Positives = 161/398 (40%), Gaps = 81/398 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF PK Y+ +KHF + + + K L+R R+ ++ QR+ R++ F
Sbjct: 206 MKVIGAFEQPKLIYNVNQKHFEKSTAKPSLFPDPLHKTELFRQRYHVVHQRILRNETFQA 265
Query: 153 PSFDVVN----SEFGSC------EISTIQSLVGQTGR-RWVMGVISQLEDGHFYLEDLAA 201
P+F S GS I+ I +L+G++G ++G+++ G L DL
Sbjct: 266 PTFSTARSATLSRTGSIATSQMNTITPIANLLGRSGSTHLLLGMLTISATGALSLSDLTG 325
Query: 202 SVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGI------------------FQVITC 240
++ +D+ A+ +F IV+ EG D F +
Sbjct: 326 TIALDIEHARPIPEKGAYFAPGMIVLVEGSYEEDSGAGSSLGGSGGIGGTIGGKFLCFSV 385
Query: 241 GFPPLEDRDQSL--------KLLAG-----YDFFG----GGTLKKEDTLRLADLEKRAAN 283
G PP E R +L LAG DF G GT + + + LE A+
Sbjct: 386 GHPPCERRTATLGGADEVDKNSLAGPAFGWTDFLGVGSQRGTGARMNKIASKLLEPERAH 445
Query: 284 DMFVILSDIWLDNEEVMGKLEVVL-----DGFESVEVVPSLFVFMGNFCSHPCNLSFHSF 338
++ VI SD+ LD + L +L D + V P + MGNF S
Sbjct: 446 NI-VIASDLHLDVPSTLSALRTLLRTYTPDTTDPHPVYPLAIILMGNFSSKASLAGVPGT 504
Query: 339 SSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS-------TVLPRCALPKYLT 389
S+ + F L ++A L H+ + +PG +DA PS T LPR +P T
Sbjct: 505 GSIEYKEHFDALASVLADFQPLIAHTTLVLVPGDNDAWPSAFSAGAATPLPRKPIPNMFT 564
Query: 390 EELQKYIPNA-----------------IFSSNPCRLNF 410
++K + A I++SNP RL +
Sbjct: 565 TRIRKVVAEANREIWGPGKAKGKEGEVIWTSNPSRLTW 602
>gi|452820225|gb|EME27270.1| DNA polymerase epsilon subunit 2 [Galdieria sulphuraria]
Length = 522
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 182/414 (43%), Gaps = 36/414 (8%)
Query: 7 KKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLL---LDQFEHESSLKSSIIDK 63
+++Q +K R +++DAL+ + F + + E+E++ + +F +++I+
Sbjct: 12 QQLQLVLKKRRVSVQLDALNRLADFYVK--NVENESLSAFASKISEFLSRCGSRNTIVSL 69
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFL-VPKFRYDSIKKHFY-QHAGSLP 121
+ R+ +L+ + R+ID+F VP S Y + + L
Sbjct: 70 QVAERIIEDILKVLNRKQSH--------PTRIIDSFREVPILSLGSESSTIYLKESTGLK 121
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSR----PSFDVVNSEFGSCEISTIQSLVGQT 177
+ Y+ R+ LL R + + + + E S ++ IQ+L T
Sbjct: 122 VLDTPENMLEQYKIRYRLLLSRALESKKATSLGQGERLAIFHKELSS-SLTPIQNL-SST 179
Query: 178 GRRW--VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG-I 234
R + G++ + E +++ED +++DLS+A + +T+ IV+ GE +G +
Sbjct: 180 DRLTANLFGILGKFEGNKYFIEDETGYIQLDLSEACSSDRIYTQGCIVLVRGEW--NGQL 237
Query: 235 FQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWL 294
F+V PPL D SL + + E D+ ++ N + VI+S+IWL
Sbjct: 238 FRVTNIEMPPL---DASLSNIMEPKALCQ-VIDSE-----VDVHEKQQNHIMVIISEIWL 288
Query: 295 DNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354
D++ V KLE + ++ +V P V MGNF S N F +L ++
Sbjct: 289 DHDSVFNKLEKLFSSLQADDVCPDTVVLMGNFLSPSLNPDEDHLLHFNNGFQQLASLLHE 348
Query: 355 HPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRL 408
+ E + + IPGP+D G +LPR + + L L+ + +SNP R+
Sbjct: 349 YIP-NEQCQVVIIPGPNDPGIKNILPRPPILESLLNPLRHLYKCSTAASNPVRI 401
>gi|313233828|emb|CBY09997.1| unnamed protein product [Oikopleura dioica]
Length = 305
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 127/270 (47%), Gaps = 18/270 (6%)
Query: 9 IQKKMKIRGYGLRMDALDEILSFVNRFP-DAEDEAIDLLLDQFEHESSLKSSIIDKESVN 67
+ K +K GY ++ DA + + + P D+ ID L+D + ++ LKS+I+D V
Sbjct: 9 VAKSLKFFGYSIQKDAAELVHKQLENVPASTHDDWIDNLVDSLQRQT-LKSNILDFNDVK 67
Query: 68 RVTSVLLQA--------------EAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
L +A A E S RVIDAF VP+F YD + +
Sbjct: 68 SALKDLQRAGGQVVQLPETEDSKRATQEEQREQDKKDSFFRVIDAFEVPRFIYDCEAEKY 127
Query: 114 YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSL 173
+ P+ G +K ++R+R+ + R R + FS ++F +I ++
Sbjct: 128 IKETQQ-PLMGGIDSKVQMFRERYNSVLVRTLRHRLFSAGHRKAQTAQFSLQKIEYLKGC 186
Query: 174 VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
+ V+G+++Q+++G +++ED + ++ ID+ A G FTE+++++ EG +G
Sbjct: 187 TTKMKDIVVLGMLNQMKEGEWWIEDPSGAIIIDMKDATFHKGLFTESSMILVEG-TYDNG 245
Query: 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGG 263
+ GFPP E S + +FFGG
Sbjct: 246 VIYATAFGFPPPESAAVSRSYHSTTNFFGG 275
>gi|440791781|gb|ELR13019.1| DNA polymerase epsilon subunit B protein [Acanthamoeba castellanii
str. Neff]
Length = 630
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 116/459 (25%), Positives = 188/459 (40%), Gaps = 105/459 (22%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
MS + K I + ++ G + DA+ ++ + + + LL + + ++SLK S+
Sbjct: 1 MSVLSTKLITQTFRLHGLSITPDAMQHLVDQAPSYKLLPAQFLSQLLSKID-KTSLKQSL 59
Query: 61 IDKESVNRVTSVLLQ-----------------------AEAAAEGDSGSASNHS------ 91
IDK + ++ E A+G G+ + S
Sbjct: 60 IDKRELQKLLRAFKSTAAAAPTKKASPFALEDILGSQYPEFVADGSQGATTATSRPAPAA 119
Query: 92 ---------AIRVIDAFLVPKFRYDSIKKH----FYQHAGSLPIHGEASAKAALYRDRFL 138
+ +V+ A +P+ RY++ K+H GSL G A +K +Y+ +
Sbjct: 120 ARPTQLVEESFKVVSALAMPRLRYNT-KRHKVERLSDERGSL--LGSAQSKIDMYKTWWY 176
Query: 139 LLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRW-VMGVISQLEDGHFYLE 197
R N G+ I+TI+SL G+ RW +MG++S+ E G Y+E
Sbjct: 177 NAHLREG-------------NGLVGAGAITTIESLAGRYSGRWRLMGILSEAEYGLHYIE 223
Query: 198 DLAASVEIDLSKAKITTG-FFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLA 256
D + +DLS AK FTE +V+ EG+M D V P +++
Sbjct: 224 DPTGRLLVDLSHAKAKRPRLFTEGGLVLVEGKM-KDEKLMVELIDVPGAAEKE------- 275
Query: 257 GYDFFGGGTLKKE---DTLRLADLEKRAAND-----MFVILSDIWLDNEEVMGKLEVVLD 308
GG + D++ + RA D M V+ SDI +DN M +LE VL
Sbjct: 276 -----GGPYIPSPQVCDSMSYEETIIRAMGDGGDKGMVVVFSDIRVDNAIAMTRLESVLR 330
Query: 309 GFESVEVVPS-------LFVFMGNFCSHPCNLSFHSFSSL---------RLQFGKLGQMI 352
F EVV + LFV +G+F + N + H F + F L +++
Sbjct: 331 SF--AEVVETHKPKEKLLFVLIGDFFAR--NKNVHVFPRVIRTPPKPRTVYPFDPLAEVL 386
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPST---VLPRCALPKYL 388
+ P L H+RF+ +PGP D T LPR LP +
Sbjct: 387 SRFPGLMPHARFVLVPGPSDPASLTASFALPRDPLPSIM 425
>gi|70989797|ref|XP_749748.1| DNA polymerase epsilon subunit B [Aspergillus fumigatus Af293]
gi|66847379|gb|EAL87710.1| DNA polymerase epsilon subunit B, putative [Aspergillus fumigatus
Af293]
Length = 762
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 176/409 (43%), Gaps = 100/409 (24%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
I++++AF +P+ Y+ KK+F + +AS K +++RDR+ ++ QR+ R++ F
Sbjct: 194 IKIVEAFDMPRLTYNVDKKYFELTKSKATLFPQASHKTSMFRDRYNIIHQRLLRNETFQS 253
Query: 153 P-------SFDVVNSEFGSCE---ISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAA 201
S +S F + ++ I +L+G++G ++G++S G L DL
Sbjct: 254 SLSYLTGHSMKRSSSSFAPTQCYRLTPIANLLGRSGTSHLLLGLLSISPAGDLSLVDLTG 313
Query: 202 SVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ---------------------- 236
SV +DLS A+ +F +V LVDG+++
Sbjct: 314 SVALDLSHARTIPDDGAWFAPGMVV------LVDGVYEEEGSVRGSVLGGNSGVGGAVGG 367
Query: 237 ----VITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLE 278
V CG PP E R+ SL DF G G+ + + R+ ++
Sbjct: 368 RFVGVSICG-PPCERREVSLGTNHQHSNGEISSSGGFGWVDFLGIGSERAQGP-RMRRIK 425
Query: 279 KRAANDM-----------FVILSDIWLDNEEVMGKLEVVLDGFESVEVV--PSLFVFMGN 325
+ + I+S++ LDN + + L V + + + P +F+ +GN
Sbjct: 426 AKCLQGLRDDADSPVRLKVAIMSEVNLDNFKSLDALRKVFSTYRELSLTERPIVFIVIGN 485
Query: 326 FCSHPC-NLSFHSFS-SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPS 376
F N H+ S + F L ++A +P L +HS F+F+PG +D AG +
Sbjct: 486 FVQKATINGGGHAGSIEYKEYFDSLSIILADYPELLQHSTFVFVPGDNDPWSSTFTAGAA 545
Query: 377 TVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLN 409
+++PR ++P T +++ + AI++SNP RL
Sbjct: 546 SIVPRQSIPDMFTSRVKRAFASANSESRLSQASEPAGEAIWTSNPSRLT 594
>gi|159129157|gb|EDP54271.1| DNA polymerase epsilon subunit B, putative [Aspergillus fumigatus
A1163]
Length = 762
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 176/409 (43%), Gaps = 100/409 (24%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
I++++AF +P+ Y+ KK+F + +AS K +++RDR+ ++ QR+ R++ F
Sbjct: 194 IKIVEAFDMPRLTYNVDKKYFELTKSKATLFPQASHKTSMFRDRYNIIHQRLLRNETFQS 253
Query: 153 P-------SFDVVNSEFGSCE---ISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAA 201
S +S F + ++ I +L+G++G ++G++S G L DL
Sbjct: 254 SLSYLTGHSMKRSSSSFAPTQCYRLTPIANLLGRSGTSHLLLGLLSISPAGDLSLVDLTG 313
Query: 202 SVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ---------------------- 236
SV +DLS A+ +F +V LVDG+++
Sbjct: 314 SVALDLSHARTIPDDGAWFAPGMVV------LVDGVYEEEGSVRGSVLGGNSGVGGAVGG 367
Query: 237 ----VITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLE 278
V CG PP E R+ SL DF G G+ + + R+ ++
Sbjct: 368 RFVGVSICG-PPCERREVSLGTNHQHSNGEISSSGGFGWVDFLGIGSERAQGP-RMRRIK 425
Query: 279 KRAANDM-----------FVILSDIWLDNEEVMGKLEVVLDGFESVEVV--PSLFVFMGN 325
+ + I+S++ LDN + + L V + + + P +F+ +GN
Sbjct: 426 AKCLQGLRDDADSPVRLKVAIMSEVNLDNFKSLDALRKVFSTYRELSLTERPIVFIVIGN 485
Query: 326 FCSHPC-NLSFHSFS-SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPS 376
F N H+ S + F L ++A +P L +HS F+F+PG +D AG +
Sbjct: 486 FVQKATINGGGHAGSIEYKEYFDSLSIILADYPELLQHSTFVFVPGDNDPWSSTFTAGAA 545
Query: 377 TVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLN 409
+++PR ++P T +++ + AI++SNP RL
Sbjct: 546 SIVPRQSIPDMFTSRVKRAFASANSESRLSQASEPAGEAIWTSNPSRLT 594
>gi|241959468|ref|XP_002422453.1| DNA polymerase epsilon subunit B, putative [Candida dubliniensis
CD36]
gi|223645798|emb|CAX40461.1| DNA polymerase epsilon subunit B, putative [Candida dubliniensis
CD36]
Length = 707
Score = 98.2 bits (243), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 87/364 (23%), Positives = 161/364 (44%), Gaps = 75/364 (20%)
Query: 117 AGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF---DVVNS-------EFGSCE 166
A +LP E+ + +R+ LL R+SR+++F + S +NS E
Sbjct: 195 AKNLPASIES------FNNRYYLLSDRLSRNENFQKKSLISLSALNSFKEGKTDSIVGHE 248
Query: 167 ISTIQSLVGQTGRRW-VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTG-FFTENTIVV 224
I+ I++++G+ G+++ + G++S+ + + LED ++E++LS+A + G F++ ++
Sbjct: 249 ITLIKNMLGRDGQKFLIFGLLSKNANDEYTLEDETDNIELNLSQACKSQGLFYSTGMFLL 308
Query: 225 AEG------------EMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFG---------- 262
EG + G F V G PP E R+ SL + DF G
Sbjct: 309 VEGIYSASGGNSNQDHGYIGGCFYVSNIGHPPSERREISLDVYGNLDFLGMHRQIAPVTG 368
Query: 263 --GGTLKKEDTLRLADLEKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFESVEV---- 315
+ K+ +L +EK +N + + +D++LD+ +V+ L E+ +
Sbjct: 369 EKITKIAKKFKKKLVQIEKNLSNHKLIFMGTDLYLDDFKVLDGLRKFFQKLENSIIESIE 428
Query: 316 -----------VPSLFVFMGNFCSHPCNLSFHSFS------SLRLQFGKLGQMIAAHPRL 358
+P V G+F S P +++ S S S + F +++ P +
Sbjct: 429 DEEGQLTEGTNIPIALVLTGSFVSKPLSVTNSSVSNITNSESYKSNFDNFTSILSKFPNI 488
Query: 359 KEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTEELQKYIP--NAIFSSNPCR 407
H + + IPG +D ST P+ +PK L+K +P N I + NP R
Sbjct: 489 VSHCKIILIPGKNDPWQSTYSLGSSSLNYFPQSFIPKVFINRLEKLLPKGNLIVTWNPTR 548
Query: 408 LNFL 411
+N+L
Sbjct: 549 INYL 552
>gi|242765491|ref|XP_002340985.1| DNA polymerase epsilon subunit B, putative [Talaromyces stipitatus
ATCC 10500]
gi|218724181|gb|EED23598.1| DNA polymerase epsilon subunit B, putative [Talaromyces stipitatus
ATCC 10500]
Length = 746
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 108/445 (24%), Positives = 180/445 (40%), Gaps = 95/445 (21%)
Query: 48 DQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYD 107
DQ + SL E VN + A E +S S ++VIDA+ P+ Y+
Sbjct: 151 DQEDRRGSLTGPASTDERVN--------SNAEEEDESLSTDPRRWMKVIDAYDQPRLTYN 202
Query: 108 SIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEI 167
KKHF + S + YRDR L R++ F S ++N+ + +I
Sbjct: 203 PNKKHFETSINKPSFFPDPSHQITFYRDRLL-------RNESFQASS--LLNNNKQTYKI 253
Query: 168 STIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKA----KITTGFFTENTI 222
+ I +L+G+ G R +G++S G L DL S+ +DLS+ + +F +
Sbjct: 254 TPIANLIGRGGSRHMCLGLLSVSPAGELSLTDLTGSIMLDLSETVPIPRGNGAWFCPGMM 313
Query: 223 VVAEG-----EML--------------VDGIFQVITCGFPPLEDRDQSLKL--------- 254
V+ EG E++ + G IT PP E R+ +L +
Sbjct: 314 VLVEGIYEEEEIVKGSVLGGNSGIGGAIGGKLMGITIAGPPCEKREVTLGMNSIDSKGDI 373
Query: 255 -----LAGYDFFGGGTLKKEDTLRLADLE------------KRAANDMFVILSDIWLDNE 297
DF G G+ + + R+ +E +R VIL +I LDN
Sbjct: 374 GTSGGFGWVDFLGVGSERAQGA-RMRKMEHKSLRQVAGTEGQRNGRCNIVILGEIHLDNT 432
Query: 298 EVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIA 353
+ L+ V + ++ E +P FV +GNF + +S+ + F L +++
Sbjct: 433 RTLDALKSVFGIYNALPFEELPLAFVMIGNFIGKVGFGQSNGGNSIEYKECFDSLASVLS 492
Query: 354 AHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQ------------- 393
L H+ F+F+PG +D G S+ +PR +P+ T ++
Sbjct: 493 DFSALLSHTTFIFVPGDNDPWASTFTVGASSAIPRKGVPELFTSRVKRAFTAANNDAGNS 552
Query: 394 --KYIPN-AIFSSNPCRLNFLITVQ 415
K P AI++SNP R++ V
Sbjct: 553 ASKSTPGEAIWTSNPSRISLFGPVH 577
>gi|401429382|ref|XP_003879173.1| putative DNA polymerase epsilon subunit b [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322495423|emb|CBZ30727.1| putative DNA polymerase epsilon subunit b [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 552
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 102/423 (24%), Positives = 178/423 (42%), Gaps = 31/423 (7%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSIIDK 63
+ +I+K + Y L+ A+ SF+ ++ E+ LL D F E + ++D+
Sbjct: 5 KDEIRKFAQAYKYNLKPLAVSRFASFLKKYDTGEEYRRGLLRDLFSLIGEQCCDNRLVDE 64
Query: 64 ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIH 123
+ V S+ EA +G G A S+++V+ VPK D + + S ++
Sbjct: 65 LKADAVISL---QEARIKGCLG-ADGSSSVQVVSLGAVPKVFVDEVSNELRVSSSSAALN 120
Query: 124 GEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG-QTGRRWV 182
+ R+ L +R R + + S D GS + +L G G +
Sbjct: 121 -----RLQCLNQRYALARRRCFRCGLYQK-SVDQRAPHDGSLALLPTSALEGLDPGLQVA 174
Query: 183 MGVISQLEDGHFYLEDLAASVEIDLS-KAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241
+ + + D +LEDL +++ S ++++T F N + V+ I QV
Sbjct: 175 VLGLLVVRDDEVFLEDLRGQIKLKFSEQSRVTQHCFLGNGFLAVVSGFWVNSILQVTRVD 234
Query: 242 FPPLEDRDQSLK-LLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
PP E R+ +L+ + D FG + LR EK+ + ++++ + LD M
Sbjct: 235 LPPAERREVTLRDAGSSMDLFGLAPRNPMEALRE---EKKRLQSVIIVMAHVHLDKAGTM 291
Query: 301 GKLEVV---LDGFESVEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFGKLG 349
KL + G E+ FVF G+F S P + S F + + L++ LG
Sbjct: 292 SKLARFFERMQGLSESELRDVTFVFTGDFSSVPLHFSDASHLPDIFDNSNRLQILLDGLG 351
Query: 350 QMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCR 407
+ IAA+ P +HS F+ IPGP D P+ + + ++ + NPCR
Sbjct: 352 RCIAANAPTAAQHSHFVLIPGPSDMTALQGFQPQTPIATQFAKGVESRTKKLTLAPNPCR 411
Query: 408 LNF 410
L F
Sbjct: 412 LRF 414
>gi|358391897|gb|EHK41301.1| hypothetical protein TRIATDRAFT_295232 [Trichoderma atroviride IMI
206040]
Length = 774
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 106/429 (24%), Positives = 178/429 (41%), Gaps = 94/429 (21%)
Query: 74 LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALY 133
+Q EA + ++ A + ++VIDA+ P+ Y+ KKHF + + AS K ++
Sbjct: 192 MQEEAGDDEETNDA--RAWLKVIDAYEQPRLLYNVDKKHFERDTAKPSLLPPASHKTTVF 249
Query: 134 RDRFLLLFQRVSRDQHFS--------RPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMG 184
R+R+ ++ QR+ R++ F R + S S +I+ I +L+G+ G ++G
Sbjct: 250 RNRYHVIHQRLLRNESFQVSAVTSSRRHTLQRSLSNQQSLKITPIANLLGRHGSNHMLLG 309
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM-LVDGI--------- 234
++ L G + DL ++ +DL++A E++ G M LVDG+
Sbjct: 310 QLNILPTGDLAVSDLTGTIALDLTQAVA----IPEDSAWFCPGMMVLVDGVYEEEEESVG 365
Query: 235 ----------------FQVITCGFPPLE--------------DRDQSLKLLAGY-DFFGG 263
FQ G PP E D DQ++ G+ DF G
Sbjct: 366 KGLSGSSGVGGTLGGRFQGFFIGQPPCEKRKSTLGISGPDGNDHDQTIGGGFGWIDFLGI 425
Query: 264 GTLKKEDTLRLADLEKR----------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--E 311
G+ + + ++ LE+R + + VI+ +I LD + L +L + E
Sbjct: 426 GSERAIGS-KMRRLERRLLPSSLDQDMPSRNRLVIIGEINLDQPRALQALRKILSLYAAE 484
Query: 312 SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPG 369
P FV GNF H S S+ + F L + P L E S F+F+PG
Sbjct: 485 PEGTSPLTFVLAGNFTQHAVMARGGSGGSIEYKEYFDALASTFSDFPTLLESSTFVFVPG 544
Query: 370 PDD-------AGPSTVLPRCALPKYLTEELQKYIP-------------NAIFSSNPCRLN 409
+D G S LPR +P T +++ +A+++SNP R++
Sbjct: 545 DNDGWVSSFTGGASVPLPRKPVPDMFTSRIRRAFAAANAEAGNTGVQGSAVWTSNPSRMS 604
Query: 410 FLITVQLNH 418
T NH
Sbjct: 605 LFGT---NH 610
>gi|149235209|ref|XP_001523483.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452892|gb|EDK47148.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 674
Score = 97.8 bits (242), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 94/383 (24%), Positives = 170/383 (44%), Gaps = 75/383 (19%)
Query: 102 PKFRYDSIKKHFYQHA--------GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
P+ +D +K F SL ++ A ++ +++ L+ R+SR++ F +
Sbjct: 142 PRCTFDKTRKQFIVTLRKEKMPLLASLSLNQRACVESK--NNQYHLIMDRLSRNESFQKV 199
Query: 154 SFDVVNS----------EFGSCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAAS 202
S +++ F + EI+ I++++G+ G+R+++ G++S+ G F LED
Sbjct: 200 SMTSISNLHSISNNNGGMFFNNEITLIKNVLGRDGQRFLLFGLLSKDSAGEFILEDSTDY 259
Query: 203 VEIDLSKA-KITTGFFTENTIVVAEG------------EMLVDGIFQVITCGFPPLEDRD 249
+E++L++ K + F++ V+ EG + + G F V PP E RD
Sbjct: 260 IELNLAQTVKNQSSFYSPGMFVLVEGIYSASGGNSSLNQDYIGGCFYVSNIAHPPAERRD 319
Query: 250 QSLKLLAGYDFFG---------GG----TLKKEDTLRLADLEKRAANDMFVIL-SDIWLD 295
+SL+ DF G GG + K +L+ LEK N V + SD++ D
Sbjct: 320 KSLEAYGLVDFLGVHRHIASANGGDRAIKIPKPYKKKLSQLEKSLTNHKIVFMGSDLYFD 379
Query: 296 NEEVMGKLEVVLDGFESVEV----------VPSLFVFMGNFCSHPCNLSFHSFSSLRLQ- 344
+ +V+ L L E+ + P V G+F S P + S +S+
Sbjct: 380 SPKVINGLTKFLQRLENSIIEEQDGDGERKTPLALVLTGSFSSKPLTSTTSSATSISNSE 439
Query: 345 -----FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPST---------VLPRCALPKYLTE 390
F ++A +P + + + IPG +D ST V+PR ++ +
Sbjct: 440 HYKGLFDSFTNLLANYPNVVHTCKIVLIPGDNDPWQSTFSLGSSCLNVIPRASIARVFVN 499
Query: 391 ELQKYIP--NAIFSSNPCRLNFL 411
L+K +P N I + NPCR+N+L
Sbjct: 500 RLEKLLPRGNLILAWNPCRINYL 522
>gi|67900904|ref|XP_680708.1| hypothetical protein AN7439.2 [Aspergillus nidulans FGSC A4]
gi|40742829|gb|EAA62019.1| hypothetical protein AN7439.2 [Aspergillus nidulans FGSC A4]
gi|259483743|tpe|CBF79384.1| TPA: second largest subunit of DNA polymerase II (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 743
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/415 (24%), Positives = 176/415 (42%), Gaps = 100/415 (24%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF-- 150
I+VI AF P+ Y++ KK+F + E S K AL+RDR+ L+ QR+ R++ F
Sbjct: 182 IKVIGAFDTPRLAYNAEKKNFEVTKIKPSLFPEPSHKTALFRDRYNLVHQRLLRNELFQV 241
Query: 151 -----SRPSFDVVNSEFGSCE---ISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAA 201
S P+ +S F + ++ + +L+G++G ++G++S G L DL
Sbjct: 242 PLASASMPTLQRSSSTFARSQCYKLTPVANLLGRSGTSHLLLGLLSISPTGELSLTDLTG 301
Query: 202 SVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ---------------------- 236
S+ +DLS A++ + T V LVDGI++
Sbjct: 302 SIVLDLSHARLIPKGGAWLTPGMFV------LVDGIYEEEENVRGSTLGGNSGIGGAIGG 355
Query: 237 ----VITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLE 278
V CG PP E R+ SL + DF G G+ + + + R+ ++
Sbjct: 356 KFVGVTICG-PPCERRETSLGMSIHGKNEDISSSGGFGWVDFTGVGSERAQGS-RMRRIQ 413
Query: 279 KRAANDM-----------FVILSDIWLDNEEVMGKLEVVLDGFE--SVEVVPSLFVFMGN 325
R ++ VI+ ++ LDN + M L V + +V+ P LFV +GN
Sbjct: 414 TRCLHEAHDGNQLNRRFKIVIMGEVNLDNMKTMDALRKVFSLYNDSAVQERPLLFVLVGN 473
Query: 326 FCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA-------GPS 376
F S+ + F L +++ P L + S F+F+PG +D G S
Sbjct: 474 FVQKAIINGGGQGGSIEYKECFDMLALVLSDFPSLLQRSTFIFVPGDNDPWSSSFSAGAS 533
Query: 377 TVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLNFLITVQ 415
+ +PR A+P T +++ + AI+++NP R++ V
Sbjct: 534 STIPRYAIPNLFTSRVKRAFASANSQMDRNQLSEPPGEAIWTTNPSRISLFGPVH 588
>gi|342878989|gb|EGU80266.1| hypothetical protein FOXB_09193 [Fusarium oxysporum Fo5176]
Length = 790
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 168/412 (40%), Gaps = 90/412 (21%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
+S ++ + +++IDA+ P+F Y+ KKHF + + + AS K ++R+R+ ++ Q
Sbjct: 198 ESETSDPRAWLKIIDAYDQPRFIYNVGKKHFEKDTSTPSLLPPASHKTTVFRNRYNVIHQ 257
Query: 143 RVSRDQHFS--------RPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGH 193
R+ R++ F + S S S +++ I +L+G+ G ++G++ L G
Sbjct: 258 RLLRNETFQSSAVSSSRKQSLSRSLSNQHSLKLTPIANLLGRHGSSHMLLGLLVVLPTGD 317
Query: 194 FYLEDLAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI---------------- 234
+ DL ++ +DLS+A + +F IV LVDG+
Sbjct: 318 LAISDLTGTIALDLSQAVAIPDDSAWFCPGMIV------LVDGVYEEEDESVGKGLSGSS 371
Query: 235 ---------FQVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDT 271
FQ G PP E R +L + DF G G+ + T
Sbjct: 372 GVGGTLGGRFQGFFIGQPPCERRQATLGISGPDGGQEQTIGGGFGWIDFLGVGSERAVGT 431
Query: 272 ----------LRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSL 319
A+ + + VI+ ++ LD + L +L G+ E P
Sbjct: 432 KMRRLERRLLRSRAEEDTAPSRGRVVIIGELNLDQPRTLQALRKILSGYASEPEGSTPLT 491
Query: 320 FVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD----- 372
FV MGNF + S S+ + F L + P L + S F+F+PG +D
Sbjct: 492 FVLMGNFTQYAVLARGGSGGSIEYKEYFDALASTLGDFPTLLQSSTFVFVPGDNDGWVSS 551
Query: 373 --AGPSTVLPRCALPKYLTEELQKYIP------------NAIFSSNPCRLNF 410
AG S LPR +P T +++ A+++SNP R++
Sbjct: 552 FTAGASVPLPRKQVPDMFTSRIRRAFATANAEVGGKSNGTAVWTSNPSRISL 603
>gi|358378825|gb|EHK16506.1| hypothetical protein TRIVIDRAFT_56933 [Trichoderma virens Gv29-8]
Length = 778
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/421 (24%), Positives = 174/421 (41%), Gaps = 89/421 (21%)
Query: 74 LQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALY 133
L + A+ D ++ + ++VIDA+ P+ Y+ KKHF + + AS K ++
Sbjct: 190 LGVQEEADDDEEASDARAWLKVIDAYDQPRLLYNVDKKHFERDTAKPSLLPPASHKTIVF 249
Query: 134 RDRFLLLFQRVSRDQHFSRPSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMG 184
R+R+ ++ QR+ R++ F S S S +I+ I +L+G+ G ++G
Sbjct: 250 RNRYHVIHQRLLRNESFQTSSVTSSRKHTLQRSLSNQQSLKITPIANLLGRHGSNHMLLG 309
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM-LVDGI--------- 234
++ L G + DL ++ +DLS+A E++ G M LVDG+
Sbjct: 310 QLNILPTGDLAISDLTGTIALDLSQAVA----IPEDSAWFCPGMMVLVDGVYEEEEESVG 365
Query: 235 ----------------FQVITCGFPPLE--------------DRDQSLKLLAGY-DFFGG 263
FQ G PP E D DQ++ G+ DF G
Sbjct: 366 KGLSGSSGVGGTLGGRFQGFFIGQPPCEKRKSTLGISGLDGTDHDQTIGGGFGWIDFLGV 425
Query: 264 GTLKKEDTLRLADLEKR----------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--E 311
G+ + + ++ LE+R + + VI+ +I LD + L +L + E
Sbjct: 426 GSERAVGS-KMRRLERRLLQPAPEQDMPSRNRVVIIGEINLDQPRALQALRKILSLYAAE 484
Query: 312 SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPG 369
P FV GNF H S S+ + F L + P L + S F+F+PG
Sbjct: 485 PEGTSPLTFVLAGNFTQHAVMARGGSGGSIEYKEYFDALASTFSDFPTLLQSSTFVFVPG 544
Query: 370 PDD-------AGPSTVLPRCALPKYLTEELQKYIP-------------NAIFSSNPCRLN 409
+D G S LPR +P+ T +++ +A+++SNP R++
Sbjct: 545 DNDGWVSSFTGGASVPLPRKPVPEMFTSRIRRAFAAANAEAGNTGVQGSAVWTSNPSRMS 604
Query: 410 F 410
Sbjct: 605 L 605
>gi|119480429|ref|XP_001260243.1| DNA polymerase epsilon subunit B, putative [Neosartorya fischeri
NRRL 181]
gi|119408397|gb|EAW18346.1| DNA polymerase epsilon subunit B, putative [Neosartorya fischeri
NRRL 181]
Length = 783
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 177/412 (42%), Gaps = 106/412 (25%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF-- 150
I++++AF +P+ Y+ KK+F + +AS K +++RDR+ ++ QR+ R++ F
Sbjct: 215 IKIVEAFDMPRLTYNVDKKYFELTKSKATLFPQASHKTSVFRDRYNIVHQRLLRNETFQS 274
Query: 151 ----------SRPSFDVVNSEFGSC-EISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
RPS ++ C ++ I +L+G++G ++G++S G L D
Sbjct: 275 SLSYSTGHSLKRPSSSFAPTQ---CYRLTPIANLLGRSGTSHLLLGLLSISPAGDLSLVD 331
Query: 199 LAASVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ------------------- 236
L SV +D+S A+ +F +V LVDG+++
Sbjct: 332 LTGSVALDMSHARTIPDDGAWFAPGMVV------LVDGVYEEEGSVRGSVLGGNSGVGGA 385
Query: 237 -------VITCGFPPLEDRDQSLKLLAGY--------------DFFGGGTLKKEDTLRLA 275
V CG PP E R+ SL Y DF G G+ + + + R+
Sbjct: 386 IGGRFVGVSICG-PPCERREISLGTNHQYSNGEISSSGGFGWVDFLGIGSERAQGS-RMR 443
Query: 276 DLEK---RAAND--------MFVILSDIWLDNEEVMGKLEVVLDGFESVEVV--PSLFVF 322
++ R +D I+S++ LDN + + L V + + P +FV
Sbjct: 444 RIQAKCLRGVHDDADSPVRLKVAIMSEVNLDNLKSLDALRKVFSTYSELSPTERPIVFVV 503
Query: 323 MGNFCSHPC-NLSFHSFS-SLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------A 373
+GNF N H+ S + F L ++A +P L +HS F+F+PG +D A
Sbjct: 504 IGNFVQKATINGGGHAGSIEYKEYFDSLSIILADYPELLQHSTFVFVPGDNDPWSSAFTA 563
Query: 374 GPSTVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLN 409
G ++ +PR +P T +++ + AI++SNP RL
Sbjct: 564 GAASTVPRQPVPDMFTSRVKRAFASANSESGRSQASEPAGEAIWTSNPSRLT 615
>gi|340923609|gb|EGS18512.1| DNA polymerase II participates in chromosomal DNA replication-like
protein [Chaetomium thermophilum var. thermophilum DSM
1495]
Length = 831
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 168/402 (41%), Gaps = 82/402 (20%)
Query: 90 HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
S ++VI+AF P++ Y+ KKHF + + S K +R+R+ ++ QR+ R++
Sbjct: 231 RSWLKVINAFDQPRYTYNVAKKHFEKITTKPSLFPPPSHKTEAFRNRYNVIHQRLLRNEA 290
Query: 150 FSRPSFDVV------NSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAAS 202
F + ++ S +I+ I +L+G G ++G++S L G+ + DL S
Sbjct: 291 FQTSAVTTSRLRRTNSAAMQSHKITPIANLLGCHGTNHMLLGMLSVLPTGNLAISDLTGS 350
Query: 203 VEIDLSKAKIT---TGFFTENTIVVAEG-------------------EMLVDGIFQVITC 240
+ +DLS A + +FT IV+ +G + G FQ +
Sbjct: 351 IALDLSHAVAIPEDSAWFTPGMIVLVDGVYEEDEEQVGKGLGGNSGVGGTIGGKFQGLFI 410
Query: 241 GFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR------ 280
G PP E R +L + DF G G+ + + R+ LE+R
Sbjct: 411 GQPPCERRRVTLGVSGPDGGPDHTIGGGFGWIDFLGVGSERAVGS-RMRKLEQRLLRQPS 469
Query: 281 -----AAN-DMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNFCSHPCN 332
A N VI+ ++ LD + L +L + + P FV GNF +H
Sbjct: 470 LADPEAPNRGRIVIVGELNLDQPRTLQALRKILSLYATDPEGSTPMTFVLTGNFTTHAVM 529
Query: 333 LSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCA 383
S S+ + F L +A P L + F+F+PG +D G + LPR +
Sbjct: 530 ARGGSGGSIEYKECFDALASTLADFPTLLTTATFVFVPGDNDGWVSAFTGGAAVPLPRKS 589
Query: 384 LPKYLTEELQKYIPN---------------AIFSSNPCRLNF 410
+P+ T +++ + A++++NP RL+
Sbjct: 590 VPELFTSRIRRAFASANSEAGLSGEGKGGEAVWATNPARLSL 631
>gi|302912714|ref|XP_003050760.1| hypothetical protein NECHADRAFT_93537 [Nectria haematococca mpVI
77-13-4]
gi|256731698|gb|EEU45047.1| hypothetical protein NECHADRAFT_93537 [Nectria haematococca mpVI
77-13-4]
Length = 771
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 163/402 (40%), Gaps = 90/402 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
+++I+A+ P+ Y+ KKHF + S + AS K ++R+R+ ++ QR+ R++ F
Sbjct: 208 LKIINAYEQPRLIYNVSKKHFERDTSSPSLLPAASHKTTVFRNRYNVIHQRLLRNESFQT 267
Query: 153 PSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ S S +++ I +L+G+ G ++G++ L G + DL ++
Sbjct: 268 SAVSSSRKRTLQRSLSNQQSLKLTPIANLLGRHGSSHMLLGLLVILPTGDLAISDLTGTI 327
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+DLS+A + +F IV LVDG+ F
Sbjct: 328 ALDLSQAVAIPEDSAWFCPGMIV------LVDGVYEEEDESVGKGLSGSSGVGGTLGGRF 381
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDT---------L 272
Q G PP E R +L + DF G G+ + T L
Sbjct: 382 QGFFIGQPPCERRKATLGISGPDGGQEQTIGGGFGWIDFLGVGSERACGTKMRRLEQRLL 441
Query: 273 RLADLEKRA-ANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSH 329
R D E A VI+ ++ LD + L +L + E P FV MGNF H
Sbjct: 442 RARDEEDDAPPRGRVVIIGELNLDQPRTLQALRKILSTYASEPEGSAPLTFVLMGNFTQH 501
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L ++ +P L + S F+F+PG +D AG S +P
Sbjct: 502 SVLARGGSGGSIEYKEYFDALASALSDYPTLLQSSTFVFVPGDNDGWVSAFTAGASVPIP 561
Query: 381 RCALPKYLTEELQKYIPNA------------IFSSNPCRLNF 410
R +P T +++ A I++SNP RL+
Sbjct: 562 RKPVPDMFTSRIRRAFATANAEAGSKSDGSVIWTSNPSRLSL 603
>gi|403216556|emb|CCK71053.1| hypothetical protein KNAG_0F03890 [Kazachstania naganishii CBS
8797]
Length = 580
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 103/425 (24%), Positives = 184/425 (43%), Gaps = 44/425 (10%)
Query: 14 KIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHE---SSLKSSIIDKESVNRV 69
K G +++D L E+ ++ A+ + I+ LD F + + + +D V +V
Sbjct: 23 KKYGLAIKLDGLQELAKYIGSSYGAQWKDEINPFLDTFAAQWRNDTCRGIFVDGVHVRQV 82
Query: 70 TSVLLQ-AEAAAEGDSGSASNHSAIRVIDAFLV------PKFRYDSIKKHFYQHAGSLPI 122
+ LL+ + G NH + V D + + Y+ KK F A + P
Sbjct: 83 LAELLEEVIVQSRSQDGILENHQDLPVEDVWQCINTIQQRRVPYNHWKKQFDSPANTSP- 141
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWV 182
AL +D F + ++RD+ S S E + I++ +G+ + +V
Sbjct: 142 -------PALKQDMFSTRY-YITRDR-----SLRNAASLGAPFEFTEIKNFMGKDSQNFV 188
Query: 183 -MGVISQLEDGHFYLEDLAASVEIDLSKAKITT-GFFTENTIVVAEGEMLVDG-IFQVIT 239
+G++ G + LED + S+EID+S+ T ++ IV+AEG G F V +
Sbjct: 189 VLGLLIMNNKGKWALEDPSGSIEIDISQCVPTPLSYYMPGCIVIAEGIYFTVGQTFHVTS 248
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVIL--SDIWLDNE 297
PP E R S L D L K+ + L + E + ++L ++LD +
Sbjct: 249 MTHPPGEKRVDSQLALGNLDLVRATHLDKQRLIVLHEKEIELDENEIILLGGESMFLDQQ 308
Query: 298 EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC----NLSFHSFSSLRLQFGKLGQMIA 353
V L + E E+ P + G+F S P + + S + R F L ++
Sbjct: 309 NVHDALRKLFAKLE--ELPPYAIICFGSFFSKPVIPTSSNAIPSTTLYRKGFESLAVILE 366
Query: 354 AHPRLKEHSRFLFIPGPDDA-------GPSTVLPRCALPKYLTEELQKYIP-NAIFSSNP 405
P L ++F+F+PG +D G VLP LP +T +L++ + + ++++NP
Sbjct: 367 EFPELVSSTKFVFVPGNNDPWKSMSTLGMDGVLPMAPLPSLVTHKLERVLKQDIVWATNP 426
Query: 406 CRLNF 410
CR+ +
Sbjct: 427 CRIMY 431
>gi|403338437|gb|EJY68458.1| DNA polymerase epsilon subunit B2 [Oxytricha trifallax]
Length = 664
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/315 (25%), Positives = 143/315 (45%), Gaps = 36/315 (11%)
Query: 128 AKAALYRDRFLLLFQRV-SRDQHFSRPSF--DVVNSEFGSCEISTIQSLVGQTGRRWVMG 184
++ Y R L RV S + RP D S+ ++ I S++G +WV+G
Sbjct: 196 SRQDYYNYRLQLAEDRVFSHTDKYVRPKLEDDKSRSDSSLTKVCNISSIMGSNQAKWVLG 255
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTG--FFTENTIVVAEGEMLVDGIFQVITCGF 242
+++ ED +YLED +V++ S+ + FFTEN+I++ G + F +
Sbjct: 256 ILTMHEDSEYYLEDQHQTVKVSFSELEFADPEVFFTENSILMCCGIYHNETYF-LTQIRQ 314
Query: 243 PPLEDRDQSLKLLAGYDFFGGGTLKK--------EDTLRLADL-------------EKRA 281
PPL + + D+FG + KK + T L++L ++
Sbjct: 315 PPLHAQKSLQFKVNERDYFGAYSKKKMMLAKQQVDPTFALSELTINNTSKTRPDAQKREK 374
Query: 282 ANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSL 341
+D VILS + LD+ L +L+G ES++ + V +GNF S + S+
Sbjct: 375 PDDCIVILSQLELDSVNTQKNLPQLLEGLESMKA--DIIVLVGNFISQKLSEKL-SYDQF 431
Query: 342 RLQFGKLGQMIAAHPR--LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQ----KY 395
+ F +GQ++ + L++ ++++FIP DD G ++P +Y + +
Sbjct: 432 KTYFESIGQVVRENNLTFLRDSTQWIFIPSVDDPGQPKLMPCLQFQEYFLTGFKGNGPQR 491
Query: 396 IPNAIFSSNPCRLNF 410
I N I +NP R+++
Sbjct: 492 IKNVILGTNPMRISY 506
>gi|344303520|gb|EGW33769.1| DNA-directed DNA polymerase epsilon, subunit B [Spathaspora
passalidarum NRRL Y-27907]
Length = 660
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/374 (24%), Positives = 169/374 (45%), Gaps = 64/374 (17%)
Query: 102 PKFRYDSIKKHF---YQHAGSL--PIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFD 156
P+ +D +K F + GSL + S + +R+ LL R+SR+++F + S
Sbjct: 131 PRSIFDKSRKQFNISTKKKGSLFQSLSENLSLSIDTFNNRYHLLSDRLSRNENFQKSSTV 190
Query: 157 VVNSEFGSC-------EISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLAASVEIDLS 208
++S S EI+ I++++G+ G+++++ G++S+ + + LED ++E++LS
Sbjct: 191 SISSLSMSLKDGNLANEITLIKNVLGRDGQKFILFGLLSKNANDQYILEDSTDNIELNLS 250
Query: 209 KAKITTG-FFTENTIVVAEG------------EMLVDGIFQVITCGFPPLEDRDQSLKLL 255
+ T G F+ V+ EG + G F V T G PP E R++SL
Sbjct: 251 QTHKTEGSFYCTGMFVIVEGIYSASGGSSNQAHDYIGGCFYVSTIGQPPAERREKSLDAY 310
Query: 256 AGYDFFG--------GGTLKK-EDTL--RLADLEKRAANDMFVIL-SDIWLDNEEVMGKL 303
DF G G + K TL +L LE+ + F+ + SD +LD+ +V+ L
Sbjct: 311 GNVDFLGIHKQAAVSGEKITKITKTLKRKLTTLERSLIDHKFIFVGSDCFLDSFKVLDGL 370
Query: 304 E--------VVLDGFESVE-VVPSLFVFMGNFCSHPCN------LSFHSFSSLRLQFGKL 348
+ +++ ES E P V G+F S P + + + + F L
Sbjct: 371 KKFFQRLENSIIESIESDEKSTPLALVLTGSFSSQPLHTTSSSTTAISQSETYKSNFDSL 430
Query: 349 GQMIAAHPRLKEHSRFLFIPGPDD---------AGPSTVLPRCALPKYLTEELQKYIP-- 397
++ +P + + + + IPG +D A P+ ++P L++ +P
Sbjct: 431 TNLLGNYPNIVQTCKLVLIPGKNDPWQSGYSLGASSMNYFPQRSIPNAFVNRLEELLPRG 490
Query: 398 NAIFSSNPCRLNFL 411
N I NP R+N+L
Sbjct: 491 NLILGWNPMRINYL 504
>gi|315056979|ref|XP_003177864.1| DNA polymerase epsilon subunit B [Arthroderma gypseum CBS 118893]
gi|311339710|gb|EFQ98912.1| DNA polymerase epsilon subunit B [Arthroderma gypseum CBS 118893]
Length = 740
Score = 95.5 bits (236), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/389 (23%), Positives = 167/389 (42%), Gaps = 81/389 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHF---YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
++V++AF + Y+ KKHF Y+ A LP A + +L+RDR+ + QR+ R++
Sbjct: 189 VKVVNAFEQQRLTYNPNKKHFEPPYESASLLP---PARNRVSLFRDRYYRVHQRLLRNET 245
Query: 150 FSRP----SFDVVNSEFGSCEISTIQSLVGQTGR----RWVMGVISQLEDGHFYLEDLAA 201
F SF N+ S + I S+ GR ++G+++ G + L D +
Sbjct: 246 FQTSTLPTSFSESNAATSSNQPYKITSITSLQGRGHTNHLLLGLLTISPSGGYNLSDPSG 305
Query: 202 SVEIDLSKAK---------------ITTGFFT-ENTIVVAEGEMLVDGIFQVITCGFPPL 245
+V ID+ AK + G + E+ VA G + G F ++ G PP
Sbjct: 306 TVAIDMEHAKGIPANGAWFVPGMILLVDGVYEDEDEDTVARGAGAIGGKFIAVSVGGPPC 365
Query: 246 EDRDQSLKLLAGYD--FFGGGTLKKEDT----------------LRLADLEKRAAN-DMF 286
E R+ SL G D G TL D+ + + ++++
Sbjct: 366 ERREVSL----GVDNQSRGWNTLPPTDSSADPMSAVGDSNQPEFMHPGSISRQSSEAQRV 421
Query: 287 VILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
VI+ ++ LDN + + L +VL +++ + +P F+ +GNF H + + S+ +
Sbjct: 422 VIMGEVNLDNPKTLQALSLVLGQYDAASDDALPPAFILIGNFV-HDAAIGAGNCGSIEYK 480
Query: 345 --FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKY 395
F L ++ P L S F+F+PG +D G + +PR +P+ +++
Sbjct: 481 EFFDSLASVLTQFPNLLRKSTFVFVPGENDPWASSFSPGATACVPRPIVPELFRSRVRRV 540
Query: 396 I----------------PNAIFSSNPCRL 408
+A+++SNP +L
Sbjct: 541 FQTAYSQDHSVSSRQIDESAVWTSNPTKL 569
>gi|119586158|gb|EAW65754.1| polymerase (DNA directed), epsilon 2 (p59 subunit) [Homo sapiens]
Length = 241
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 5/126 (3%)
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ 344
MFV LSD+WLD EV+ KL ++ G+ P+ F+ GNF S P + +L+
Sbjct: 1 MFVFLSDVWLDQVEVLEKLRIMFAGYSPAP--PTCFILCGNFSSAP--YGKNQVQALKDS 56
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
L +I +P + + SRF+F+PGP+D G ++LPR L + +T E ++ +P ++F++N
Sbjct: 57 LKTLADIICEYPDIHQ-SRFVFVPGPEDPGFGSILPRPPLAESITNEFRQRVPFSVFTTN 115
Query: 405 PCRLNF 410
PCR+ +
Sbjct: 116 PCRIQY 121
>gi|326474737|gb|EGD98746.1| hypothetical protein TESG_06023 [Trichophyton tonsurans CBS 112818]
gi|326484866|gb|EGE08876.1| DNA polymerase epsilon subunit B [Trichophyton equinum CBS 127.97]
Length = 740
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/403 (24%), Positives = 173/403 (42%), Gaps = 76/403 (18%)
Query: 78 AAAEGDSGSASNHSA---IRVIDAFLVPKFRYDSIKKHF---YQHAGSLPIHGEASAKAA 131
A + G A+N A ++VI AF + Y+ KKHF ++ A LP A+ + +
Sbjct: 171 ADSAGSPDDAANDRARKRVKVISAFEQQRLTYNMNKKHFESPHEPASLLP---PANNRVS 227
Query: 132 LYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSC-------EISTIQSLVGQTGRRWVMG 184
L+RDR+ + +R+ R++ F + SE + +I++I SL G+ ++
Sbjct: 228 LFRDRYYRIHERLLRNETFQTSTLPTSFSESNTATTSNQPYKITSITSLQGRGSTTHLLL 287
Query: 185 VISQLE-DGHFYLEDLAASVEIDLSKAK---------------ITTGFFT-ENTIVVAEG 227
+ + G + L D + +V IDL AK + G + E+ V G
Sbjct: 288 GLLTISPSGGYNLSDPSGTVAIDLDHAKGIPANGAWFVPGMILLVDGIYEDEDEDTVTRG 347
Query: 228 EMLVDGIFQVITCGFPPLEDRDQSLKLLA---GY----------DFFGGGTLKKEDTLRL 274
+ G F I+ G PP E R+ SL + + G+ D G + R
Sbjct: 348 AGAIGGKFIAISVGGPPCERREVSLGIDSQSRGWNIAPPTDPSADPMSAGGASNQPEYRH 407
Query: 275 ADLEKRAANDM--FVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHP 330
R ++ VI+ ++ LDN + + L +VL+ +++ + P FV +GNF H
Sbjct: 408 PSSTSRQPSEAQRVVIMGEVNLDNPKTLQALSIVLNQYDAASDDTQPPAFVLIGNFV-HD 466
Query: 331 CNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPR 381
+ + S+ + F L ++ P L S F+F+PG +D G + +PR
Sbjct: 467 AAIGAGNCGSIEYKEFFDSLASVLTQFPNLLRTSTFVFVPGENDPWASSFSPGATACIPR 526
Query: 382 CALPKYLTEELQKY----------IP------NAIFSSNPCRL 408
+P+ +++ IP +A+++SNP RL
Sbjct: 527 PLVPELFRSRVRRVFQTASSQDHPIPSRQVDESAVWTSNPTRL 569
>gi|346321797|gb|EGX91396.1| DNA polymerase epsilon subunit B, putative [Cordyceps militaris
CM01]
Length = 801
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 97/412 (23%), Positives = 170/412 (41%), Gaps = 94/412 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VIDAF P+ Y+ KKHF + + +AS K A +R+R+ ++ QR+ R + F
Sbjct: 208 LKVIDAFEQPRLYYNVSKKHFERDTTKPSLLPKASHKTAAFRNRYDVIHQRLLRHESFQT 267
Query: 153 PSFDVV---NSEFGSC-----EISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
P+ +S+ GS +I+ I +++G+ G ++G ++ L G + D+ ++
Sbjct: 268 PTVSSSRSHDSQKGSSNPQALKITPIANMLGRHGSNHMLLGQLNVLPTGGLAISDVTGTI 327
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEM-------------------LVDGIFQVITCG 241
+D+ +A + +F IV+ +G + G FQ G
Sbjct: 328 ALDVKQAVAIPEDSAWFCPGMIVLVDGVYEEEDESVGKGLSGSTGVGGTLGGRFQGFFIG 387
Query: 242 FPPLEDRDQSLKLLA-------------GY-DFFGGGTLKKEDTLRLADLEKR------- 280
PP E R +L + G+ DF G G+ ++ ++ LE+R
Sbjct: 388 QPPCEKRRATLGITGPEQTPDHAIGGGFGWIDFLGVGS-ERAVGQKMRRLERRLLAPPAP 446
Query: 281 --------------AANDMFVILSDIWLDNEEVMGKLEVVLD--GFESVEVVPSLFVFMG 324
+ V++ ++ LD + L +L G E V P FV G
Sbjct: 447 EPSFGDEDAGGRVGPSRGRVVVIGELNLDQPRALQALRKILALYGAEPVGCAPVAFVLAG 506
Query: 325 NFCSHPCNLSFHSFSS---LRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AG 374
NF H S + F L +A P L + S F+F+PG +D AG
Sbjct: 507 NFTQHAVMARGGSSGGSIEYKEYFDALASALADFPTLLQTSTFIFVPGDNDGWVSAFTAG 566
Query: 375 PSTVLPRCALPKYLTEELQKY--------------IP-NAIFSSNPCRLNFL 411
ST +PR +P T +++ +P +A+++SNP R++
Sbjct: 567 ASTPVPRHPVPDLFTSRVRRAFATANAEAGAAARGVPGSAVWASNPARVSLF 618
>gi|238501986|ref|XP_002382227.1| DNA polymerase epsilon subunit B, putative [Aspergillus flavus
NRRL3357]
gi|220692464|gb|EED48811.1| DNA polymerase epsilon subunit B, putative [Aspergillus flavus
NRRL3357]
Length = 752
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/425 (24%), Positives = 185/425 (43%), Gaps = 97/425 (22%)
Query: 82 GDSGSASN-HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLL 140
GDS +S+ S I+V+DAF +P+ Y++ KK+F + + S K AL+RDR+ ++
Sbjct: 173 GDSNLSSHPRSWIKVVDAFDIPRLTYNADKKYFEVAKSKASLFPQPSHKTALFRDRYNVI 232
Query: 141 FQRVSRDQHFS-------RPSFDVVNSEFG--SC-EISTIQSLVGQTG-RRWVMGVISQL 189
QR+ R++ F PS +S F C +++ + +L+G++G ++G++S
Sbjct: 233 HQRLLRNESFQLSLGSSSVPSLSRSSSSFAPNKCYKLTPVANLLGRSGTSHLILGMLSVS 292
Query: 190 EDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM-LVDGIFQ------------ 236
G L DL S+ ++LS A++ EN A G + LVDGI++
Sbjct: 293 PTGDLSLTDLTGSIALELSHARM----IPENGAWFAPGMIVLVDGIYEEEENVKGSTLGG 348
Query: 237 --------------VITCGFPPLEDRDQSLKLLA-------------GY-DFFGGGTLKK 268
V CG PP E R+ SL + G+ DF G G+ +
Sbjct: 349 NTGVGGAIGGIFVGVSICG-PPCERREMSLGTKSRQTTGEVSSSGGFGWVDFLGVGSERA 407
Query: 269 EDTLRLADLEKRAANDM-----------FVILSDIWLDNEEVMGKLEVVLDGFESVEVV- 316
R+ ++ R ++ I+S++ LD+ + + L+ + + +
Sbjct: 408 RGP-RMRHIQARCLQNLHGGADDSRCMKIAIMSEVNLDHVKTVDALKRLFGFYNDLAPRE 466
Query: 317 -PSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA 373
P +FV +GNF + + + F L ++ P L +HS F+F+PG +D
Sbjct: 467 RPIVFVLIGNFVQKAMINGGGQAAGIEYKEYFDSLAMGLSEFPSLLQHSTFVFVPGDNDP 526
Query: 374 GPSTV-------LPRCALPKYLT----------------EELQKYIPNAIFSSNPCRLNF 410
PS +PR A+P+ T +L + I AI+++NP R+
Sbjct: 527 WPSAFSAGAASAIPRQAVPELFTSRVKRAFAMANAESDRSQLSEPIGEAIWTTNPSRITL 586
Query: 411 LITVQ 415
V
Sbjct: 587 FGPVH 591
>gi|83767085|dbj|BAE57225.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 751
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 108/438 (24%), Positives = 190/438 (43%), Gaps = 100/438 (22%)
Query: 69 VTSVLLQAEAAAEGDSGSASN-HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEAS 127
V S L E GDS +S+ S I+V+DAF +P+ Y++ KK+F + + S
Sbjct: 162 VASTLGDGE---HGDSNLSSHPRSWIKVVDAFDIPRLTYNADKKYFEVAKSKASLFPQPS 218
Query: 128 AKAALYRDRFLLLFQRVSRDQHFS-------RPSFDVVNSEFG--SC-EISTIQSLVGQT 177
K AL+RDR+ ++ QR+ R++ F PS +S F C +++ + +L+G++
Sbjct: 219 HKTALFRDRYNVIHQRLLRNESFQLSLGSSSVPSLSRSSSSFAPNKCYKLTPVANLLGRS 278
Query: 178 G-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM-LVDGIF 235
G ++G++S G L DL S+ ++LS A++ EN A G + LVDGI+
Sbjct: 279 GTSHLILGMLSVSPTGDLSLTDLTGSIALELSHARM----IPENGAWFAPGMIVLVDGIY 334
Query: 236 Q--------------------------VITCGFPPLEDRDQSLKLLA------------- 256
+ V CG PP E R+ SL +
Sbjct: 335 EEEENVKGSTLGGNTGVGGAIGGIFVGVSICG-PPCERREMSLGTKSRQTTGEVSSSGGF 393
Query: 257 GY-DFFGGGTLKKEDTLRLADLEKRAANDM-----------FVILSDIWLDNEEVMGKLE 304
G+ DF G G+ + R+ ++ R ++ I+S++ LD+ + + L+
Sbjct: 394 GWVDFLGVGSERARGP-RMRHIQARCLQNLHGGADDSRCMKIAIMSEVNLDHVKTVDALK 452
Query: 305 VVLDGFESVEV--VPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKE 360
+ + + P +FV +GNF + + + F L ++ P L +
Sbjct: 453 RLFGFYNDLAPRERPIVFVLIGNFVQKAMINGGGQAAGIEYKEYFDSLAMGLSEFPSLLQ 512
Query: 361 HSRFLFIPGPDDAGP-------STVLPRCALPKYLTEELQKY----------------IP 397
HS F+F+PG +D P ++ +PR A+P+ T +++ I
Sbjct: 513 HSTFVFVPGDNDPWPSAFSAGAASAIPRQAVPELFTSRVKRAFAMANAESDRSQSSEPIG 572
Query: 398 NAIFSSNPCRLNFLITVQ 415
AI+++NP R+ V
Sbjct: 573 EAIWTTNPSRITLFGPVH 590
>gi|317142977|ref|XP_001819227.2| DNA polymerase epsilon subunit B [Aspergillus oryzae RIB40]
gi|391863737|gb|EIT73037.1| DNA polymerase epsilon, subunit B [Aspergillus oryzae 3.042]
Length = 752
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 186/425 (43%), Gaps = 97/425 (22%)
Query: 82 GDSGSASN-HSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLL 140
GDS +S+ S I+V+DAF +P+ Y++ KK+F + + S K AL+RDR+ ++
Sbjct: 173 GDSNLSSHPRSWIKVVDAFDIPRLTYNADKKYFEVAKSKASLFPQPSHKTALFRDRYNVI 232
Query: 141 FQRVSRDQHFS-------RPSFDVVNSEFG--SC-EISTIQSLVGQTG-RRWVMGVISQL 189
QR+ R++ F PS +S F C +++ + +L+G++G ++G++S
Sbjct: 233 HQRLLRNESFQLSLGSSSVPSLSRSSSSFAPNKCYKLTPVANLLGRSGTSHLILGMLSVS 292
Query: 190 EDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM-LVDGIFQ------------ 236
G L DL S+ ++LS A++ EN A G + LVDGI++
Sbjct: 293 PTGDLSLTDLTGSIALELSHARM----IPENGAWFAPGMIVLVDGIYEEEENVKGSTLGG 348
Query: 237 --------------VITCGFPPLEDRDQSLKLLA-------------GY-DFFGGGTLKK 268
V CG PP E R+ SL + G+ DF G G+ +
Sbjct: 349 NTGVGGAIGGIFVGVSICG-PPCERREMSLGTKSRQTTGEVSSSGGFGWVDFLGVGSERA 407
Query: 269 EDTLRLADLEKRAANDM-----------FVILSDIWLDNEEVMGKLEVVLDGFESVEV-- 315
R+ ++ R ++ I+S++ LD+ + + L+ + + +
Sbjct: 408 RGP-RMRHIQARCLQNLHGGADDSRCMKIAIMSEVNLDHVKTVDALKRLFGFYNDLAPRE 466
Query: 316 VPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDA 373
P +FV +GNF + + + F L ++ P L +HS F+F+PG +D
Sbjct: 467 RPIVFVLIGNFVQKAMINGGGQAAGIEYKEYFDSLAMGLSEFPSLLQHSTFVFVPGDNDP 526
Query: 374 GP-------STVLPRCALPKYLTEELQKY----------------IPNAIFSSNPCRLNF 410
P ++ +PR A+P+ T +++ I AI+++NP R+
Sbjct: 527 WPSAFSAGAASAIPRQAVPELFTSRVKRAFAMANAESDRSQSSEPIGEAIWTTNPSRITL 586
Query: 411 LITVQ 415
V
Sbjct: 587 FGPVH 591
>gi|302498218|ref|XP_003011107.1| DNA polymerase epsilon subunit B, putative [Arthroderma benhamiae
CBS 112371]
gi|291174655|gb|EFE30467.1| DNA polymerase epsilon subunit B, putative [Arthroderma benhamiae
CBS 112371]
Length = 780
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 178/401 (44%), Gaps = 75/401 (18%)
Query: 79 AAEGDSGSASNHSA--IRVIDAFLVPKFRYDSIKKHF---YQHAGSLPIHGEASAKAALY 133
+AE +A++H+ ++VI AF + Y+ KKHF ++ A LP A+ + +L+
Sbjct: 213 SAESPEDAANDHARKRVKVISAFEQQRLTYNMNKKHFESPHEPASLLP---PANNRVSLF 269
Query: 134 RDRFLLLFQRVSRDQHFSRP----SFDVVNSEFGSCE---ISTIQSLVGQTGRRWVMGVI 186
RDR+ + +R+ R++ F SF N+ S + I++I SL G+ ++ +
Sbjct: 270 RDRYYRIHERLLRNETFQTSTLPTSFGESNTAATSNQPYKITSITSLQGRGSTTHLLLGL 329
Query: 187 SQLE-DGHFYLEDLAASVEIDLSKAK---ITTGFFTENTIV-------------VAEGEM 229
+ G + L D + +V IDL AK +F I+ VA G
Sbjct: 330 LTISPSGGYNLSDPSGTVAIDLDHAKGIPANGAWFVPGMILLVDGIYEDEVEDTVARGAG 389
Query: 230 LVDGIFQVITCGFPPLEDRDQSLKLLA---GYDFF-----------GGGTLKKEDTLRLA 275
+ G F I+ G PP E R+ SL + + G++ GG + ++ +
Sbjct: 390 AIGGKFIAISVGGPPCERREISLGIDSQSRGWNIAPTTDPSADPMSAGGDTNQPESRHPS 449
Query: 276 DLEKRAAN-DMFVILSDIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCN 332
+ + +++ VI+ ++ LDN + + L +VL ++ V + P FV +GNF H
Sbjct: 450 SISRLSSDAQRVVIMGEVNLDNPKTLQALSIVLRQYDLVSDDTHPPAFVLIGNFV-HDAA 508
Query: 333 LSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCA 383
+ + S+ + F L ++ P L S F+F+PG +D G + +PR
Sbjct: 509 IGAGNCGSIEYKEFFDSLASVLTQFPNLLRKSTFVFVPGENDPWASSFSPGATACIPRPL 568
Query: 384 LPKYLTEELQKYI----------------PNAIFSSNPCRL 408
+P+ +++ +A+++SNP RL
Sbjct: 569 VPELFRSRVRRVFQAASSQDHPTPSRQIDESAVWTSNPTRL 609
>gi|320037896|gb|EFW19832.1| conserved hypothetical protein [Coccidioides posadasii str.
Silveira]
Length = 741
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 190/455 (41%), Gaps = 105/455 (23%)
Query: 52 HESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
H S+ S +D +R S+ LQ + IRV++AF P+ Y+ K+
Sbjct: 127 HSSTEMSYPLD----DRSKSIDLQGGVGEDNIFSPNDPRQWIRVVNAFDQPRLLYNMDKR 182
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS----------FDVVNSE 161
+F S + +S++ +RDR+ ++QRV R+ F +PS ++
Sbjct: 183 NFALSPSSASVFPSSSSRIDAFRDRYNRVYQRVLRNSAFRQPSNVSRQSRQLESSTSSTN 242
Query: 162 FGSCEISTIQSLVGQTGRRWVMGVISQLED-GHFYLEDLAASVEIDLSKAKITTGFFTEN 220
GS ++ + SL G+ G ++ + L G F L DL SV +DL AK G
Sbjct: 243 KGSYSLTFVSSLQGRPGTSHLLLGLLHLSPIGGFCLSDLTGSVALDLRFAK---GVPEGE 299
Query: 221 TIVVAEGEMLVDGIFQ------------------------VITCGFPPLEDRDQSLKL-- 254
T V +LVDGI++ ++ PP E R+ SL+
Sbjct: 300 TWFVPGMVLLVDGIYEEQTSSGPLPSISGGIGGNIGGRFVALSVAGPPCERRELSLETNS 359
Query: 255 --------LAGY---DFFGGGTLKKEDTLRLADLEKRA----------ANDMFVILSDIW 293
++G+ DF G G+ + E R+ ++++ A ++SD+
Sbjct: 360 SSDHSSAPISGFGWTDFLGVGSRRAEGN-RMRQIKQQCFETSSPISAHARTQIALMSDVN 418
Query: 294 LDNEEVMGKLEVVLDGFES--VEVVPSLFVFMGNFCSH--------PCNLSFHSFSSLRL 343
L+N + + L VL + + +E P FV +G+F C++++
Sbjct: 419 LNNPKTLQGLSNVLQVYNNLPIERTPLAFVLIGDFAQQAIMTGKEGACSVTYKGL----- 473
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYI 396
F +L ++++ RL ++S F+F+PG +D AG + +PR +P T +++
Sbjct: 474 -FDRLAIILSSCSRLLQNSTFIFVPGDNDPWASNFCAGAAPPVPRGPIPDLFTSRVRRAF 532
Query: 397 P----------------NAIFSSNPCRLNFLITVQ 415
AI++SNP RL+ VQ
Sbjct: 533 TVANAETQSCRAAHPGGEAIWTSNPARLSIFGPVQ 567
>gi|303316322|ref|XP_003068163.1| DNA polymerase epsilon subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240107844|gb|EER26018.1| DNA polymerase epsilon subunit B family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 741
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 190/455 (41%), Gaps = 105/455 (23%)
Query: 52 HESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
H S+ S +D +R S+ LQ + IRV++AF P+ Y+ K+
Sbjct: 127 HSSTEMSYPLD----DRSKSIDLQGGVCEDNIFSPNDPRQWIRVVNAFDQPRLLYNMDKR 182
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPS----------FDVVNSE 161
+F S + +S++ +RDR+ ++QRV R+ F +PS ++
Sbjct: 183 NFALSPSSASVFPSSSSRIDAFRDRYNRVYQRVLRNSAFRQPSNVSRQSRQLESSTSSTN 242
Query: 162 FGSCEISTIQSLVGQTGRRWVMGVISQLED-GHFYLEDLAASVEIDLSKAKITTGFFTEN 220
GS ++ + SL G+ G ++ + L G F L DL SV +DL AK G
Sbjct: 243 KGSYSLTFVSSLQGRPGTSHLLLGLLHLSPIGGFCLSDLTGSVALDLRFAK---GVPEGE 299
Query: 221 TIVVAEGEMLVDGIFQ------------------------VITCGFPPLEDRDQSLKL-- 254
T V +LVDGI++ ++ PP E R+ SL+
Sbjct: 300 TWFVPGMVLLVDGIYEEQTSSGPLPSISGGIGGNIGGRFVALSVAGPPCERRELSLETNS 359
Query: 255 --------LAGY---DFFGGGTLKKEDTLRLADLEKRA----------ANDMFVILSDIW 293
++G+ DF G G+ + E R+ ++++ A ++SD+
Sbjct: 360 SSDHSSAPISGFGWTDFLGVGSRRAEGN-RMRQIKQQCFETSSPISAHARTQIALMSDVN 418
Query: 294 LDNEEVMGKLEVVLDGFES--VEVVPSLFVFMGNFCSH--------PCNLSFHSFSSLRL 343
L+N + + L VL + + +E P FV +G+F C++++
Sbjct: 419 LNNPKTLQGLSNVLQVYNNLPIERTPLAFVLIGDFAQQAIMTGKEGACSVTYKGL----- 473
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYI 396
F +L ++++ RL ++S F+F+PG +D AG + +PR +P T +++
Sbjct: 474 -FDRLAIILSSCSRLLQNSTFIFVPGDNDPWASNFCAGAAPPVPRGPIPDLFTSRVRRAF 532
Query: 397 P----------------NAIFSSNPCRLNFLITVQ 415
AI++SNP RL+ VQ
Sbjct: 533 TVANAETQSCRAAHPGGEAIWTSNPARLSIFGPVQ 567
>gi|302421638|ref|XP_003008649.1| DNA polymerase epsilon subunit B [Verticillium albo-atrum VaMs.102]
gi|261351795|gb|EEY14223.1| DNA polymerase epsilon subunit B [Verticillium albo-atrum VaMs.102]
Length = 811
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 164/401 (40%), Gaps = 84/401 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI A+ P+ Y+ KKHF + + AS K AL+R+R+ ++ QR+ R++ F
Sbjct: 223 LKVIGAYDQPRLCYNVAKKHFERETTKPSLLPPASHKTALFRNRYHVIHQRLLRNEAFQT 282
Query: 153 PSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ S + +I+ I +L+G+ G ++G++ L G + DL ++
Sbjct: 283 SAVASARASTLKRSLSTQQNHKITPIANLLGRHGSHHMLLGMLVVLPTGGLAISDLTGTI 342
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEG-------------------EMLVDGIFQVITCG 241
+DLS+A + +F IV+ +G + G FQ G
Sbjct: 343 ALDLSQAIAIPEDSAWFAPGMIVLMDGVYEEEEESHGKGLSGSSGVGGTLGGKFQGFFVG 402
Query: 242 FPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLE-----KRAA 282
PP E R +L + DF G G+ ++ R+ LE +R+A
Sbjct: 403 QPPCEKRRATLGVSGPDGGQDHTIGGGFGWIDFLGVGS-ERAVGPRMRKLEQRLLPRRSA 461
Query: 283 NDM-----FVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSHPCNLSF 335
D +IL ++ LD + L +L + E P FV GNF H
Sbjct: 462 EDTPGRGRMIILGEVNLDQPRTLQALRKILSLYANEPEGQSPMTFVLTGNFTQHAVLARG 521
Query: 336 HSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPK 386
S S+ + F L +A P L + + F+F+PG +D AG + LPR P+
Sbjct: 522 GSGGSIEYKEVFDALASTLADFPTLLQTATFVFVPGDNDGWVSSFGAGAAVPLPRKPAPE 581
Query: 387 YLTEELQKYIP-----------------NAIFSSNPCRLNF 410
T +++ AI++SNP RL+
Sbjct: 582 MFTSRIRRTFAAANAELNSDSEKRATEGEAIWTSNPSRLSL 622
>gi|346974837|gb|EGY18289.1| DNA polymerase epsilon subunit B [Verticillium dahliae VdLs.17]
Length = 807
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 98/401 (24%), Positives = 163/401 (40%), Gaps = 84/401 (20%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI A+ P+ Y+ KKHF + + AS K AL+R+R+ ++ QR+ R++ F
Sbjct: 223 LKVIGAYDQPRLCYNVAKKHFERETTKPSLLPPASHKTALFRNRYHVIHQRLLRNEAFQT 282
Query: 153 PSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ S + +I+ I +L+G+ G ++G++ L G + DL ++
Sbjct: 283 SAVASARASTLKRSLSNQQNHKITPIANLLGRHGSHHMLLGMLVVLPTGGLAISDLTGTI 342
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEG-------------------EMLVDGIFQVITCG 241
+DLS+A + +F IV+ +G + G FQ G
Sbjct: 343 ALDLSQAIAIPEDSAWFAPGMIVLMDGVYEEEEESHGKGLSGSSGVGGTLGGKFQGFFVG 402
Query: 242 FPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLE-----KRAA 282
PP E R +L + DF G G+ ++ R+ LE +R+A
Sbjct: 403 QPPCEKRRATLGVSGPDGGQDHTIGGGFGWIDFLGVGS-ERAVGPRMRKLEQRLLPRRSA 461
Query: 283 NDM-----FVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSHPCNLSF 335
D +IL ++ LD + L +L + E P FV GNF H
Sbjct: 462 EDTPGRGRMIILGEVNLDQPRTLQALRKILSLYANEPEGQSPMTFVLTGNFTQHAVLARG 521
Query: 336 HSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPK 386
S S+ + F L +A P L + + F+F+PG +D AG + LPR P
Sbjct: 522 GSGGSIEYKEVFDALASTLADFPTLLQTATFVFVPGDNDGWVSSFGAGAAVPLPRKPAPD 581
Query: 387 YLTEELQKYIP-----------------NAIFSSNPCRLNF 410
T +++ AI++SNP RL+
Sbjct: 582 MFTSRIRRTFAAANAELNSDSEKRATEGEAIWTSNPSRLSL 622
>gi|392871531|gb|EAS33446.2| DNA polymerase epsilon subunit B [Coccidioides immitis RS]
Length = 742
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 108/455 (23%), Positives = 188/455 (41%), Gaps = 105/455 (23%)
Query: 52 HESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
H S+ S +D +R S+ LQ + IRV++AF P+ Y+ K+
Sbjct: 128 HSSTEMSYPLD----DRSKSIDLQGGVCEDNIFSPNDPRQWIRVVNAFDQPRLLYNMDKR 183
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----------DVVNSE 161
+F S + +S++ +RDR+ ++QRV R+ F +PS ++
Sbjct: 184 NFALSPSSASVFPSSSSRIDAFRDRYNRVYQRVLRNSAFRQPSTVSRQSRQLESSTSSTN 243
Query: 162 FGSCEISTIQSLVGQTGRRWVMGVISQLED-GHFYLEDLAASVEIDLSKAKITTGFFTEN 220
GS ++ + SL G+ G ++ + L G F L DL SV +DL AK G
Sbjct: 244 KGSYSLTFVSSLQGRPGTSHLLLGLLHLSPIGGFCLSDLTGSVALDLRFAK---GVPEGE 300
Query: 221 TIVVAEGEMLVDGIFQ------------------------VITCGFPPLEDRDQSLKL-- 254
T V +LVDGI++ ++ PP E R+ SL+
Sbjct: 301 TWFVPGMVLLVDGIYEEQTSSGPLPSISGGIGGNIGGRFVALSVAGPPCERRELSLETNS 360
Query: 255 --------LAGY---DFFGGGTLKKEDTLRLADLEKRA----------ANDMFVILSDIW 293
+ G+ DF G G+ + E R+ ++++ A ++SD+
Sbjct: 361 SSDHSSAPIGGFGWTDFLGVGSRRAEGN-RMRQIKQQCFETSSPISAHARTQIALMSDVN 419
Query: 294 LDNEEVMGKLEVVLDGFES--VEVVPSLFVFMGNFCSH--------PCNLSFHSFSSLRL 343
L+N + + L VL + + +E P FV +G+F C++++
Sbjct: 420 LNNPKTLQGLSNVLQVYNNLPIERTPLAFVLIGDFAQQAIMTGKEGACSVTYKGL----- 474
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYI 396
F +L +++ RL ++S F+F+PG +D AG + +PR +P T +++
Sbjct: 475 -FDRLAIILSNCSRLLQNSTFIFVPGDNDPWASNFCAGAAPPVPRGPIPDLFTSRVRRAF 533
Query: 397 P----------------NAIFSSNPCRLNFLITVQ 415
AI++SNP RL+ VQ
Sbjct: 534 TVANAETQSCRAAHRGGEAIWTSNPARLSIFGPVQ 568
>gi|302662329|ref|XP_003022821.1| DNA polymerase epsilon subunit B, putative [Trichophyton verrucosum
HKI 0517]
gi|291186786|gb|EFE42203.1| DNA polymerase epsilon subunit B, putative [Trichophyton verrucosum
HKI 0517]
Length = 788
Score = 91.7 bits (226), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 168/387 (43%), Gaps = 77/387 (19%)
Query: 93 IRVIDAFLVPKFRYDSIKKHF---YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
+RVI AF + Y+ KKHF ++ A LP A+ + +L+RDR+ + +R+ R++
Sbjct: 237 VRVISAFEQQRLTYNMNKKHFESPHEPASLLP---PANNRVSLFRDRYYRIHERLLRNET 293
Query: 150 FSR----PSFDVVNSEFGSCE---ISTIQSLVGQTGRRWVMGVISQLE-DGHFYLEDLAA 201
F SF N+ S + I++I SL G+ ++ + + G + L D +
Sbjct: 294 FQTSTLPTSFGESNTAATSNQPYKITSITSLQGRGSTTHLLLGLLTISPSGGYNLSDPSG 353
Query: 202 SVEIDLSKAK---ITTGFFTENTIV-------------VAEGEMLVDGIFQVITCGFPPL 245
+V IDL AK +F I+ VA G + G F I+ G PP
Sbjct: 354 TVAIDLDHAKGIPANGAWFVPGMILLVDGIYEDEVEDTVARGAGAIGGKFIAISVGGPPC 413
Query: 246 EDRDQSLKLLA---GYDF------------FGGGTLKKEDTLRLADLEKRAANDM--FVI 288
E R+ SL + + G++ GG T + E R R ++D VI
Sbjct: 414 ERREVSLGIDSQSRGWNIAPTTDPSADPMSAGGDTNQPE--FRHPSSISRLSSDAQRVVI 471
Query: 289 LSDIWLDNEEVMGKLEVVLDGFE--SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ-- 344
+ ++ LDN + + L +VL ++ S + P FV +GNF H + + S+ +
Sbjct: 472 MGEVNLDNPKTLQALSIVLSQYDLASDDTGPPAFVLIGNFV-HDAAIGAGNCGSIEYKEF 530
Query: 345 FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYI- 396
F L ++ P L S F+F+PG +D G + +PR +P+ +++
Sbjct: 531 FDSLASVLTQFPNLLRKSTFVFVPGENDPWASSFSPGATACIPRPLVPELFRSRVRRVFQ 590
Query: 397 ---------------PNAIFSSNPCRL 408
+A+++SNP RL
Sbjct: 591 AASSQDHPTPSRQIDESAVWTSNPTRL 617
>gi|367036471|ref|XP_003648616.1| hypothetical protein THITE_2106279 [Thielavia terrestris NRRL 8126]
gi|346995877|gb|AEO62280.1| hypothetical protein THITE_2106279 [Thielavia terrestris NRRL 8126]
Length = 817
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 162/417 (38%), Gaps = 95/417 (22%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
D G ++VI AF P++ Y+ KKHF + + AS K +R+R+ ++ Q
Sbjct: 226 DEGVRDVRRWLKVISAFDQPRYTYNVAKKHFERITSKPSLLPSASHKTEAFRNRYNVIHQ 285
Query: 143 RVSRDQHFSRPSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGH 193
R+ R++ F + S S +I+ + +L+G+ G ++G++ L G+
Sbjct: 286 RLLRNEAFQTSAVTSARSSALRRGASSMQSHKITPVANLLGRHGTNHMLLGMLVILPTGN 345
Query: 194 FYLEDLAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI---------------- 234
+ DL ++ +DLS A + +FT IV LVDGI
Sbjct: 346 LAISDLTGTIALDLSHAVAIPEDSAWFTPGMIV------LVDGIYEEEEESVGRGLSGSS 399
Query: 235 ---------FQVITCGFPPLEDRDQSL---KLLAGYDFFGGGTLKKEDTL---------- 272
FQ G PP E R +L L G D GG D L
Sbjct: 400 GVGGTIGGRFQGFFIGQPPCEKRRVTLGISGLDGGADHTVGGGFGWVDFLGVGSERAVGS 459
Query: 273 RLADLEKR------------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPS 318
R+ LE+R VI+ ++ LD + L+ +L + + P
Sbjct: 460 RMRKLEQRLLRQPALANPDSPGRGRVVIVGELNLDQPRSLQALKKILSLYATDPEGSTPM 519
Query: 319 LFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD---- 372
FV GNF +H S S+ + F L +A P L + F+F+PG +D
Sbjct: 520 AFVLAGNFTTHAVMARGGSGGSIEYKEFFDALASTLADFPMLLTTATFVFVPGDNDGWVS 579
Query: 373 ---AGPSTVLPRCALPKYLTEELQKYIP----------------NAIFSSNPCRLNF 410
G + LPR +P T +++ AI++SNP RL+
Sbjct: 580 AFSGGAAVPLPRKPVPDLFTSRIRRVFAAANAEAGLSSADGKGGEAIWTSNPSRLSL 636
>gi|327301821|ref|XP_003235603.1| DNA polymerase epsilon subunit B [Trichophyton rubrum CBS 118892]
gi|326462955|gb|EGD88408.1| DNA polymerase epsilon subunit B [Trichophyton rubrum CBS 118892]
Length = 628
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 165/385 (42%), Gaps = 73/385 (18%)
Query: 93 IRVIDAFLVPKFRYDSIKKHF---YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQH 149
++VI AF + Y+ KKHF ++HA LP A+ + +L+RDR+ + +R+ R++
Sbjct: 189 VKVISAFEQQRLTYNMNKKHFESPHEHASLLP---PANNRVSLFRDRYYRIHERLLRNET 245
Query: 150 FSRP----SFDVVNSEFGSCE---ISTIQSLVGQTGRRWVMGVISQLE-DGHFYLEDLAA 201
F SF N+ S + I++I SL G+ ++ + + G + L D +
Sbjct: 246 FQTSTLPTSFGQSNTSAMSNQPYKITSITSLQGRGSTTHLLLGLLTISPSGSYNLSDPSG 305
Query: 202 SVEIDLSKAK---------------ITTGFFT-ENTIVVAEGEMLVDGIFQVITCGFPPL 245
+V IDL AK + G + E+ VA G + G F I+ G PP
Sbjct: 306 TVAIDLDHAKGIPANGAWFVPGMILLVDGIYEDEDEDTVARGAGAIGGKFIAISVGGPPC 365
Query: 246 EDRDQSLKL---LAGY----------DFFGGGTLKKEDTLRLADLEKRAANDM--FVILS 290
E R+ SL + G+ D G + R R +D VI+
Sbjct: 366 ERREVSLGIDNQSRGWNIALPTDPSADPMSAGGDSNQFEFRHPSSISRQPSDAQRVVIMG 425
Query: 291 DIWLDNEEVMGKLEVVLDGFESV--EVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FG 346
++ LDN + + L +VL+ +++ + FV +GNF H + + S+ + F
Sbjct: 426 EVNLDNPKTLQALSIVLNQYDAASDDTQSPAFVLIGNFV-HDAAIGAGNCGSIEYKEFFD 484
Query: 347 KLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYI--- 396
L ++ P L S F+F+PG +D G + +PR +P+ +++
Sbjct: 485 SLASVLTQFPNLLRKSTFVFVPGENDPWASSFSPGATACIPRPLVPELFRSRVRRVFQTA 544
Query: 397 -------------PNAIFSSNPCRL 408
+A+++SNP RL
Sbjct: 545 SSQDHPTSPRQIDESAVWTSNPTRL 569
>gi|154344677|ref|XP_001568280.1| putative DNA polymerase epsilon subunit b [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134065617|emb|CAM43387.1| putative DNA polymerase epsilon subunit b [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 96/426 (22%), Positives = 180/426 (42%), Gaps = 33/426 (7%)
Query: 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSII 61
+ + +I+ ++ Y L+ A+D +F+ ++ E DLL D F E ++ ++
Sbjct: 3 EPKDEIRSFAQVYKYNLKPLAVDRFAAFLKKYDTGEKYRRDLLRDLFNLIREQCCENRLV 62
Query: 62 DKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLP 121
D+ + V S+ EA +G G A S+++V+ VP+ D + + S
Sbjct: 63 DELKADAVISL---QEAKIKGCLG-AEGSSSVQVVSLDAVPRVFVDEVSNDLRVGSSSTA 118
Query: 122 IHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG--QTGR 179
++ + R+ L +R R + + S D + GS + +L G +
Sbjct: 119 LN-----RLQCLNQRYALARRRCLRCGLYQK-SVDQRALQDGSLVLLPTSALEGLDSNLQ 172
Query: 180 RWVMGVISQLEDGHFYLEDLAASVEIDLS-KAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
V+G++ + D +LEDL V++ S ++++T F N + V+ QV
Sbjct: 173 IAVLGLLV-VRDDEVFLEDLRGKVKLKFSEQSRVTQHCFLGNGFMAVVSGFWVNSFLQVA 231
Query: 239 TCGFPPLEDRDQSLKLLA-GYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNE 297
PP E R+ +L+ + D FG + LR E+ + ++++ + LD
Sbjct: 232 RVDLPPAERREVTLRDVGPSMDLFGLAPQYPMEALR---EERTRVQSVIIVMAHVHLDKA 288
Query: 298 EVMGKLEVV---LDGFESVEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFG 346
M KL + G ++ F+F G+F S P + F + +++
Sbjct: 289 GTMNKLARFFERMQGLSESDLREVTFIFTGDFSSVPLHFGDASHLPDIFDNSDRMQVLLD 348
Query: 347 KLGQMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSN 404
LG+ IA + P ++S F+ IPGP D P+ + + + +Q + N
Sbjct: 349 GLGRCIAVNAPTAAQYSHFVLIPGPSDMTALQGFQPQTPIAAHFAKGVQSRTKKLTLAPN 408
Query: 405 PCRLNF 410
PCRL F
Sbjct: 409 PCRLRF 414
>gi|340056581|emb|CCC50916.1| putative DNA polymerase epsilon subunit b [Trypanosoma vivax Y486]
Length = 530
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 20/244 (8%)
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G++ DG YLEDL V++ L + + + G + +VVA+G+ + +G V +
Sbjct: 172 VLGILIDNADGT-YLEDLYGRVKLVLHRDVRYSMGMVGDGLLVVAKGQWM-NGALTVASL 229
Query: 241 GFPPLEDRDQSLKLLA-GYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
PP E R+ +LK D FG + D EK A + V+LS I+LD
Sbjct: 230 SLPPAEKREDTLKDTGPDCDLFGR---RPVDVAVAFAREKMALRSVIVVLSQIYLDQHST 286
Query: 300 MGKLEVVLDGFES---VEVVPSLFVFMGNFCS---HPCNLS-----FHSFSSLRLQFGKL 348
+ +L ++ VE+ + V +GN CS H ++S F R L
Sbjct: 287 VTRLASFFSEMQNRSEVELADTTIVLVGNLCSTAIHYDDVSHLPEPFEGCDRYRSLMDTL 346
Query: 349 GQMIAAH-PRLKEHSRFLFIPGPDDAGPST-VLPRCALPKYLTEELQKYIPNAIFSSNPC 406
+I AH P + ++++ + +PGP DA VLP+ + + LQ + +F+ NPC
Sbjct: 347 ATVILAHAPNVAQYTQVVIVPGPGDATALLGVLPQPPIVSSFAKTLQTRLKRVVFAPNPC 406
Query: 407 RLNF 410
RL F
Sbjct: 407 RLRF 410
>gi|408399284|gb|EKJ78399.1| hypothetical protein FPSE_01419 [Fusarium pseudograminearum CS3096]
Length = 775
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 163/401 (40%), Gaps = 89/401 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFS- 151
+++++A+ P+F Y+ KKHF + + AS K ++R+R+ ++ QR+ R++ F
Sbjct: 208 LKIVNAYEQPRFIYNVAKKHFEKDPSPPSLLPPASHKTTVFRNRYHVIHQRLLRNESFQS 267
Query: 152 -------RPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ D S +++ I +++G+ G ++G++ L G + DL ++
Sbjct: 268 SAVSSSRKHKLDHSLSNKQLLKLTPIANMLGRHGSSHMLLGLLVILPTGDLAISDLTGTI 327
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+DLS+A + +F IV LVDG+ F
Sbjct: 328 ALDLSQAVAIPEDSAWFCPGMIV------LVDGVYEEEDESVGKGLSGSSGVGGTLGGRF 381
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDT----LRLADL 277
Q G PP E R +L + DF G G+ + T L L
Sbjct: 382 QGFFIGQPPCERRKATLGISGPDGGQEQIIGGGFGWIDFLGVGSERALGTKMRRLESRLL 441
Query: 278 EKRAANDM-----FVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSHP 330
RA +D VI+ ++ LD + L +L + E VP FV MGNF +
Sbjct: 442 RSRAEDDAPSRGRVVIIGELNLDQPRTLQALRKILSTYASEPEGSVPLTFVLMGNFTQYA 501
Query: 331 CNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPR 381
S + + F L ++ P L + S F+F+PG +D AG S LPR
Sbjct: 502 VLARGGSGGGIEYKEYFDSLASTLSDFPTLLQSSTFVFVPGDNDGWVSSFTAGASVPLPR 561
Query: 382 CALPKYLTEELQKYIP------------NAIFSSNPCRLNF 410
+P T +++ A+++SNP R++
Sbjct: 562 KQVPDMFTSRIRRVFATANGEAGGKTNGTAVWTSNPSRISL 602
>gi|198424917|ref|XP_002121989.1| PREDICTED: similar to polymerase (DNA directed), epsilon 2 [Ciona
intestinalis]
Length = 335
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 69/118 (58%), Gaps = 4/118 (3%)
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMI 352
+L E+V+ KLE + GF+ + P FVF G+FCS P LS + +L L +++
Sbjct: 104 FLSLEKVIKKLETLFIGFQ--DFPPVCFVFCGSFCSQPYGLSHRT--NLEDGLKALAKVL 159
Query: 353 AAHPRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
P + S+ +F+P P+D G +LPR A+P T+E +PNAIF+SNPCR+ +
Sbjct: 160 KRFPSILAQSKMVFVPSPEDYGLGQILPRPAIPDVATDEFCAKVPNAIFASNPCRIQY 217
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 59/116 (50%), Gaps = 15/116 (12%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLK 57
M+ + + + K K+ G+ LR + L E+L+ +N ++ ID LL+ + ++ L+
Sbjct: 1 MAQKIKSFVVKVFKMNGFTLRSEGSAFLTEVLAPINEI--EREDFIDKLLESIQKQN-LE 57
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
S II+++ V + ++ E DSG VIDAF VPKF Y +K F
Sbjct: 58 SDIIERD----VLELAVKDCGTHEEDSGQT-----FSVIDAFEVPKFIYSKERKKF 104
>gi|46136767|ref|XP_390075.1| hypothetical protein FG09899.1 [Gibberella zeae PH-1]
Length = 774
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 163/401 (40%), Gaps = 89/401 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFS- 151
+++++A+ P+F Y+ KKHF + + AS K ++R+R+ ++ QR+ R++ F
Sbjct: 208 LKIVNAYEQPRFIYNVAKKHFEKDPSPPSLLPPASHKTTVFRNRYHVIHQRLLRNESFQS 267
Query: 152 -------RPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ D S +++ I +++G+ G ++G++ L G + DL ++
Sbjct: 268 STVSSSRKHKLDHSLSNKQLLKLTPIANMLGRHGSSHMLLGLLVILPTGDLAISDLTGTI 327
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+DLS+A + +F IV LVDG+ F
Sbjct: 328 ALDLSQAVAIPEDSAWFCPGMIV------LVDGVYEEEDESVGKGLSGSSGVGGTLGGRF 381
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLK----KEDTLRLADL 277
Q G PP E R +L + DF G G+ + K L L
Sbjct: 382 QGFFIGQPPCERRKATLGISGPDGGQEQIIGGGFGWIDFLGVGSERALGTKMRKLESRLL 441
Query: 278 EKRAANDM-----FVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSHP 330
RA +D VI+ ++ LD + L +L + E VP FV MGNF +
Sbjct: 442 RSRAEDDAPSRGRAVIIGELNLDQPRTLQALRKILSTYASEPEGSVPLTFVLMGNFTQYA 501
Query: 331 CNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPR 381
S + + F L ++ P L + S F+F+PG +D AG S LPR
Sbjct: 502 VLARGGSGGGIEYKEYFDSLASTLSDFPTLLQSSTFVFVPGDNDGWVSSFTAGASVPLPR 561
Query: 382 CALPKYLTEELQKYIP------------NAIFSSNPCRLNF 410
+P T +++ A+++SNP R++
Sbjct: 562 KQVPDMFTSRIRRVFATANTEAGGKTNGTAVWTSNPSRISL 602
>gi|50557148|ref|XP_505982.1| YALI0F28215p [Yarrowia lipolytica]
gi|74632175|sp|Q6C030.1|DPB2_YARLI RecName: Full=DNA polymerase epsilon subunit B; AltName: Full=DNA
polymerase II subunit 2
gi|49651852|emb|CAG78794.1| YALI0F28215p [Yarrowia lipolytica CLIB122]
Length = 652
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 82/347 (23%), Positives = 150/347 (43%), Gaps = 48/347 (13%)
Query: 94 RVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRP 153
+VI AF P F Y++ ++ F + + A + + ++ R+ L++ R+ R
Sbjct: 142 KVISAFDQPLFHYNARQQRFEKRKTKPTLFANAQSASNMFLTRYHLVYNRLLR------- 194
Query: 154 SFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA-KI 212
N + +I++I+SL+G+ G + G++S+ + L+D + + L+ K
Sbjct: 195 -----NDDTTDLKITSIRSLIGRQGEFSIFGMLSKNPEQKICLQDDTGRILLILAAGCKP 249
Query: 213 TTG-FFTENTIVVAEGEMLVDG---IFQVITCGFPPLEDRDQSLKLLAGYDFFG------ 262
G ++ E + V+ G + G +F VIT G P E R +++ D+ G
Sbjct: 250 DPGVYYPEGSFVICNGRYMKSGDAEVFVVITMGPPVAEKRQETITAYGNMDYLGLHGNPH 309
Query: 263 GGTLKKEDTLRLADL---EKRAANDMFVIL-SDIWLDNEEVMGKLEVVLDGFE-----SV 313
G +++ + A + EKR + ++ D++LDN + L+ V E S
Sbjct: 310 GSVVRRIERQVEASMLAEEKRLVDQKVIVFGGDMYLDNPLTLKALQKVFSTIELEFQDSG 369
Query: 314 EVVPSLFVFMGNFCS--HPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPD 371
P VF G+F S P +L F L F + +I + +F+PG
Sbjct: 370 TKKPLAMVFSGDFTSQYQPPHLYKKGFDKLEELFKEFSSIITG-------VKIIFVPGQR 422
Query: 372 DAGPST------VLPRCALPKYLTEELQKYIPNAI-FSSNPCRLNFL 411
D +T V+P LP + + + + SSNPCR+ +L
Sbjct: 423 DPWTNTFPTQNAVVPLQPLPTTMINRVARLCGEDVSMSSNPCRMAYL 469
>gi|121715206|ref|XP_001275212.1| DNA polymerase epsilon subunit B, putative [Aspergillus clavatus
NRRL 1]
gi|119403369|gb|EAW13786.1| DNA polymerase epsilon subunit B, putative [Aspergillus clavatus
NRRL 1]
Length = 769
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 169/417 (40%), Gaps = 104/417 (24%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
I+V++AF +P+ Y+ KK+F + +A K ++RDR+ ++ QR+ R++ F
Sbjct: 198 IKVVEAFDMPRLTYNVDKKYFEITKSKATLFPQALHKTNVFRDRYNIIHQRLLRNESFQT 257
Query: 153 PSFDVVNSEF----------GSCEISTIQSLVGQTGRRWVMGVISQLED-GHFYLEDLAA 201
S + S ++ I +L+G++G ++ + L G L DL
Sbjct: 258 SSNHSIGPSLQRSSSSFAPSQSYRLTPIANLLGRSGTSHLLLGLLALSPAGDLSLIDLTG 317
Query: 202 SVEIDLSKAKITT---GFFTENTIVVAEGEMLVDGIFQ---------------------- 236
SV +DL+ A+ +F IV LVDGI++
Sbjct: 318 SVSLDLNHARTIPEDGAWFAPGMIV------LVDGIYEEEGNVRGSILGGNSGVGGAIGG 371
Query: 237 ----VITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLE 278
V CG PP E R+ SL L DF G G+ ++ LR+ +E
Sbjct: 372 RFVGVSICG-PPCERRESSLGTSQQHNNGEISSSGGLGWVDFLGVGS-ERAQGLRMRSIE 429
Query: 279 KR-----------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPS----LFVFM 323
R + I+S++ LD+ + + L ++ + E+ P+ FVF+
Sbjct: 430 SRCLQTGHNSTESSTRIKMAIMSEVNLDSSKTLDALRMIFSSY--CELPPNERPLAFVFI 487
Query: 324 GNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AG 374
GNF + S+ + F L ++A P L HS F+F+PG +D G
Sbjct: 488 GNFVQNAVINGGGYAGSIEYKEFFDSLSVVLADFPDLLRHSTFVFVPGDNDPWSSAFSGG 547
Query: 375 PSTVLPRCALPKYLTEELQKYIPN----------------AIFSSNPCRLNFLITVQ 415
++ +PR +P+ T +++ AI++SNP RL V
Sbjct: 548 AASTVPRQPVPEMFTSRVKRAFATANSEPGRSGVAEPAGEAIWTSNPSRLTLFGPVH 604
>gi|328726047|ref|XP_003248725.1| PREDICTED: DNA polymerase epsilon subunit 2-like [Acyrthosiphon
pisum]
Length = 318
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 87/144 (60%), Gaps = 11/144 (7%)
Query: 273 RLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCN 332
+L + EK + N M V +SD++LD+ +V+ K +L+ F ++ P V MG++ S C
Sbjct: 36 KLLEYEK-SKNRMIVFVSDVFLDDPKVLRKFHTLLNSFN--DLAPVAIVMMGDYLS--CR 90
Query: 333 LSFHSFSS-LRLQFGKLGQMIAAH-PRLKEHSRFLFIPGPDD----AGPSTVLPRCALPK 386
+ H+++ L+ +LG + + P L +H+ F+ + GP D A +++LPR +P+
Sbjct: 91 IPSHAYAQELKTHLNQLGHFLHDNTPVLCKHTMFVLLSGPGDRYSGAAGASILPRPLIPE 150
Query: 387 YLTEELQKYIPNAIFSSNPCRLNF 410
+LTEE ++ +P +F++NPCR+ +
Sbjct: 151 FLTEEFRRLVPRCVFTTNPCRMQY 174
>gi|116179832|ref|XP_001219765.1| hypothetical protein CHGG_00544 [Chaetomium globosum CBS 148.51]
gi|88184841|gb|EAQ92309.1| hypothetical protein CHGG_00544 [Chaetomium globosum CBS 148.51]
Length = 827
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 91/409 (22%), Positives = 164/409 (40%), Gaps = 98/409 (23%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P++ Y+ KKHF + + AS K +R+R+ ++ QR+ R++ F
Sbjct: 234 LKVIGAFEQPRYSYNVAKKHFEKATSKPSLLPPASHKTDAFRNRYNVVHQRLLRNESFQT 293
Query: 153 PSFD---------VVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAAS 202
+ ++ S +I+ I +L+G+ G ++G++ L G+ + DL +
Sbjct: 294 SAVTSARTTGLRRSASTTMQSHKITPISNLLGRHGTNHMLLGMLVLLPTGNIAISDLTGT 353
Query: 203 VEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI------------------------- 234
+ +DLS A + +FT IV L+DG+
Sbjct: 354 ITLDLSHAVAIPEDSAWFTPGMIV------LIDGVYEEEEESIGKGLSGSSGVGGTIGGR 407
Query: 235 FQVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR 280
FQ G PP E R +L + DF G G+ + + R+ +E+R
Sbjct: 408 FQGFFIGQPPCEKRRATLGVSGLDGGPDHTIGGGFGWIDFLGVGSERAVGS-RMRKIEQR 466
Query: 281 ------------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNF 326
VI+ ++ LD + L+ +L + + P F+ GNF
Sbjct: 467 LLRQPALADPDSPGRGRVVIVGELSLDVPRSLQALKKILSLYATDPEGSTPMTFILAGNF 526
Query: 327 CSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPST 377
+H S S+ + F L +A P L + F+F+PG +D G +
Sbjct: 527 TTHAVMARGGSGGSIEYKEFFDALASTLADFPTLLTTATFIFVPGDNDGWASAFSGGSAV 586
Query: 378 VLPRCALPKYLTEELQKYIP----------------NAIFSSNPCRLNF 410
LPR ++P+ T +++ AI+++NP R++
Sbjct: 587 PLPRNSVPELFTSRIKRVFTAANADAGLSPAEGKGGEAIWTTNPSRISL 635
>gi|378734570|gb|EHY61029.1| DNA polymerase epsilon subunit 2 [Exophiala dermatitidis
NIH/UT8656]
Length = 866
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 101/435 (23%), Positives = 166/435 (38%), Gaps = 111/435 (25%)
Query: 87 ASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSR 146
A S ++VI AF P+ Y + KK F AG + K +++R+R+ ++ QR+ R
Sbjct: 223 ADPRSYLKVISAFEQPRMLYSTSKKCFEPMAGPPSLLPPIQHKISMFRNRYHVVHQRLLR 282
Query: 147 DQHFSRPSFDVVNS-----EFGSC--------EISTIQSLVGQTG-RRWVMGVISQLEDG 192
++ F P+F + GS +++ I +L+G++G ++G++ G
Sbjct: 283 NESFQAPTFSTITRPPSLMHSGSSVATLQQAYKLTPISNLLGRSGTSHLLLGMLVHSAAG 342
Query: 193 HFYLEDLAASVEIDLSKAKI---TTGFFTENTIVVAEGEMLVDGI--------------- 234
L DL+ SV +D+S A+ +F IV+ EG DG
Sbjct: 343 DLALSDLSGSVVLDMSIARPIPENGAWFCPGMIVLVEGTYEEDGSHNSSLGSATGVGGQI 402
Query: 235 ---FQVITCGFPPLEDR-----------DQSLKLLAGY---DFFGGGTLKK--------- 268
F T PP E R D + AGY DF G G+ K
Sbjct: 403 KGHFIADTMAGPPAERRAMTIGSASEQNDSHTNVGAGYGWIDFLGVGSEKGIGSQMRKIQ 462
Query: 269 ------------------EDT--LRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLD 308
+DT E++ + IL + LD+ + + +L
Sbjct: 463 KRIFGSPAPSASGSETSFQDTGGTDQEQQEQQPSRTKIAILGECNLDSPRTLEAIRAILS 522
Query: 309 GFESVEV----VPSLFVFMGNFCSHPCNL-SFHSFSSLRLQ--FGKLGQMIAAHPRLKEH 361
+ S +P V MGNF S S S+ + F L M+A P L
Sbjct: 523 SYTSASSDIVDLPLSIVLMGNFVSAASMAGSTKGGGSVEYKEHFDALASMLAEFPTLLST 582
Query: 362 SRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIPN---------------- 398
+ +F+PG +D AG + LPR +P+ T +++ I
Sbjct: 583 TTLIFVPGDNDPWASSFSAGAACPLPRQGIPEVFTSRVRRAIATANAEHHGKKDKKDSSP 642
Query: 399 ---AIFSSNPCRLNF 410
A+++SNP R++
Sbjct: 643 PGEAVWTSNPARISL 657
>gi|367023687|ref|XP_003661128.1| hypothetical protein MYCTH_2300172 [Myceliophthora thermophila ATCC
42464]
gi|347008396|gb|AEO55883.1| hypothetical protein MYCTH_2300172 [Myceliophthora thermophila ATCC
42464]
Length = 829
Score = 84.7 bits (208), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 160/409 (39%), Gaps = 98/409 (23%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI+AF P++ Y+ KK F + A + AS K +R+R+ + QR+ R++ F
Sbjct: 235 MKVINAFEQPRYTYNVAKKQFEKIASKPSLLPPASHKTEAFRNRYNAIHQRLLRNEAFQT 294
Query: 153 PSFDVV--------NSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ S S +I+ + +L+G+ G ++G++ L G+ + DL ++
Sbjct: 295 SAVTSARLTALRRSGSTMQSHKITPVANLLGRHGTNHMLLGMLVILPTGNLAISDLTGTI 354
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+DLS A + +FT IV L+DG+ F
Sbjct: 355 GLDLSHAVAIPEDSAWFTPGMIV------LIDGVYEEDEETTGKGLSGSSGVGGTIGGRF 408
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR- 280
Q G PP E R +L + DF G G+ + R+ +E+R
Sbjct: 409 QGFFIGQPPCEKRRATLGVSGLDGGVDHTIGGGFGWIDFLGVGSARAVGP-RMRKVEQRL 467
Query: 281 -----------AANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNFC 327
VI+ ++ LD + L+ +L + + P FV GNF
Sbjct: 468 VRQPALADPDSPGRGRVVIVGELNLDQPRSLQALKKILSLYATDPEGSTPMAFVLSGNFT 527
Query: 328 SHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTV 378
+H S S+ + F L +A P L + F+F+PG +D G +
Sbjct: 528 THAVMARGGSGGSIEYKEYFDALASTLADFPTLLTTATFIFVPGDNDGWVSAFSGGAAVP 587
Query: 379 LPRCALPKYLTEELQKYIP-----------------NAIFSSNPCRLNF 410
LPR +P T +++ AI+++NP R++
Sbjct: 588 LPRKPVPDLFTSRIKRVFAAANAEAGLLSTTEGKGGEAIWTTNPSRISL 636
>gi|336473210|gb|EGO61370.1| hypothetical protein NEUTE1DRAFT_120353 [Neurospora tetrasperma
FGSC 2508]
gi|350293521|gb|EGZ74606.1| hypothetical protein NEUTE2DRAFT_103495 [Neurospora tetrasperma
FGSC 2509]
Length = 850
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 148/377 (39%), Gaps = 81/377 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P+ Y+ KKHF + + AS K +R+R+ ++ QR+ R++ F
Sbjct: 237 LKVIHAFDQPRLMYNVGKKHFERDPSKPSLLPAASHKTDAFRNRYNVIHQRILRNEAFQS 296
Query: 153 PSFD-------VVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVE 204
S S S +I+ I +L+G+ G ++G++ L G + DL ++
Sbjct: 297 SSVQGSSLRQRTNASGLSSHKITPIANLLGRHGSNHMLLGMLVVLPTGSLAISDLTGTIT 356
Query: 205 IDLSKAKIT---TGFFTENTIVVAEGEMLVDGI--------------------------- 234
+DLS A + +FT IV L+DG+
Sbjct: 357 LDLSHAVAIPEDSAWFTPGMIV------LIDGVYEEEEETMTMGNGLSGSSGVGGTIGGR 410
Query: 235 FQVITCGFPPLEDRDQSLKL---------------LAGYDFFGGGTLK---------KED 270
FQ G PP E R +L + DF G G+ + +
Sbjct: 411 FQGFFIGQPPCEKRRVTLGVSGPDGTGADHTIGGGFGWIDFLGVGSERAVGSKMRKLEHR 470
Query: 271 TLRLADL--EKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNF 326
LR L + R + VI+ ++ LD + L +L + S P FV GNF
Sbjct: 471 ILRQPALLEDGRPSRGRAVIIGELNLDQPRSLQALRKILGLYASDPEGCTPMTFVLAGNF 530
Query: 327 CSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPST 377
H S S+ + F L +A P L + F+F+PG +D G +T
Sbjct: 531 TQHAVMARGGSGGSIEYKEFFDALASTLADFPSLLTTATFVFVPGDNDGWMSAFSGGAAT 590
Query: 378 VLPRCALPKYLTEELQK 394
LPR +P T +++
Sbjct: 591 PLPRKPVPDLFTSRIRR 607
>gi|400599261|gb|EJP66965.1| DNA polymerase alpha/epsilon subunit B [Beauveria bassiana ARSEF
2860]
Length = 788
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 165/408 (40%), Gaps = 91/408 (22%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFS- 151
+++IDAF P+ Y+ KKHF + + +AS K A +R R+ ++ QR+ R++ F
Sbjct: 208 LQIIDAFEQPRLFYNVEKKHFERDTTKPSLLPQASHKTAAFRSRYHVIHQRLLRNESFQT 267
Query: 152 -------RPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
+ +S + +I+ I +++G+ G ++G ++ L G + DL ++
Sbjct: 268 STVSSSRSRALQRTSSNPQNLKITPIANMLGRHGSNHMLLGQLNILPTGELAISDLTGTI 327
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEM-------------------LVDGIFQVITCG 241
+++ +A + +F IV+ +G + G F+ G
Sbjct: 328 ALEIKQAVAVPDDSAWFCPGMIVLVDGVYEEVEKSIGNGLSGSNGVGGTLGGRFKGFLIG 387
Query: 242 FPPLEDRDQSLKLLA-------------GY-DFFGGGTLKKEDTLRLADLEKR------- 280
PP E R +L + G+ DF G G+ ++ ++ LE+R
Sbjct: 388 QPPCEKRKATLGITGPDEAPDHTIGGGFGWIDFLGVGS-ERAVGPKMRRLERRLLAAPAA 446
Query: 281 ------------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNF 326
+ V++ ++ LD + L +L + E P FV GNF
Sbjct: 447 PSSLDEDADPVGPSRGRVVVIGELTLDQPRALQALRKILALYAAEPEGSAPVTFVLAGNF 506
Query: 327 CSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPST 377
S S+ + F L +A P L S F+F+PG +D AG S
Sbjct: 507 TQQAVLARGGSGGSIEYKEYFDALASALAEFPTLLRASTFVFLPGDNDGWVSSFTAGASV 566
Query: 378 VLPRCALPKYLTEELQKY--------------IP-NAIFSSNPCRLNF 410
LPR +P T +++ +P +A+++SNP RL+
Sbjct: 567 PLPRKPVPDMFTSRIRRAFAAANAEAGTSTRGVPGSAVWASNPSRLSL 614
>gi|402578024|gb|EJW71979.1| hypothetical protein WUBG_17114, partial [Wuchereria bancrofti]
Length = 154
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 79/146 (54%), Gaps = 4/146 (2%)
Query: 185 VISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPP 244
+++Q G + +EDL S+E+DL +A G FT+ I++ EG V G+F+V G P
Sbjct: 1 MLTQRNPGVYEIEDLTGSIEVDLKEATFHKGLFTDGCIMMLEGRS-VGGLFRVNAVGLAP 59
Query: 245 LEDRDQSLKLLAGYDFFGG-GTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKL 303
+E + ++FGG GT+ +RL L +R F+++SD+WLD+ ++ +
Sbjct: 60 VESAKVTRNYFGVTNWFGGEGTVACGSQIRLRTLCERNDRTRFILMSDVWLDDSRILSAI 119
Query: 304 EVVLDGFESVEVVPSLFVFMGNFCSH 329
++ F +++ F+ GNFCS
Sbjct: 120 NELIFAFTDSQLLA--FIICGNFCSQ 143
>gi|218201272|gb|EEC83699.1| hypothetical protein OsI_29518 [Oryza sativa Indica Group]
gi|222640702|gb|EEE68834.1| hypothetical protein OsJ_27612 [Oryza sativa Japonica Group]
Length = 131
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/120 (50%), Positives = 92/120 (76%), Gaps = 5/120 (4%)
Query: 2 SGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHES---SLK- 57
S TRKK+Q+K ++RG+ L++DAL+E +F+ RFPDAED+A+DLLLD+ + E SL
Sbjct: 5 SAATRKKLQRKFRLRGFTLKVDALEEAAAFLARFPDAEDDALDLLLDELDKEPRNFSLPL 64
Query: 58 SSIIDKESVNRVTSVLLQAEAAAEGDSGSA-SNHSAIRVIDAFLVPKFRYDSIKKHFYQH 116
SSI+D+++V RV ++L++AE A + S +A S SA+RV+D+F+VP+F YD IKK FY++
Sbjct: 65 SSILDRDAVRRVVALLVEAEEAVDAASPAATSARSALRVVDSFVVPRFHYDPIKKVFYEY 124
>gi|302845280|ref|XP_002954179.1| hypothetical protein VOLCADRAFT_94959 [Volvox carteri f.
nagariensis]
gi|300260678|gb|EFJ44896.1| hypothetical protein VOLCADRAFT_94959 [Volvox carteri f.
nagariensis]
Length = 265
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 73/129 (56%), Gaps = 3/129 (2%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
+ DAF VP +D +++ + + IH A +K LY R LL+ QR+ R + F +
Sbjct: 64 VEFTDAFSVPHLAFDPVQRKLFLNTKPRHIHASAESKHQLYLQRLLLIQQRLQRSRMFQQ 123
Query: 153 PSFDVVN--SEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVEIDLSK 209
+ + N S S +++ +QSL+G G R+V+G IS+ EDG + LED +V +DLS
Sbjct: 124 SNLLLPNSSSRGHSVQLTDLQSLMGVFGVTRYVLGCISRAEDGRYVLEDTTGAVPLDLSA 183
Query: 210 AKITTGFFT 218
A+ GF+T
Sbjct: 184 AETAAGFYT 192
>gi|164425361|ref|XP_958288.2| hypothetical protein NCU10155 [Neurospora crassa OR74A]
gi|157070897|gb|EAA29052.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 687
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 148/377 (39%), Gaps = 81/377 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P+ Y+ KKHF + + AS K +R+R+ ++ QR+ R++ F
Sbjct: 74 LKVIHAFDQPRLMYNVGKKHFERDPSKPSLLPAASHKTDAFRNRYNVIHQRILRNEAFQS 133
Query: 153 PSFD-------VVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVE 204
S + S +I+ I +L+G+ G ++G++ L G + DL ++
Sbjct: 134 SSVQGSSLRQRTNANGLSSHKITPIANLLGRHGSNHMLLGMLVVLPTGSLAISDLTGTIT 193
Query: 205 IDLSKAKIT---TGFFTENTIVVAEGEMLVDGI--------------------------- 234
+DLS A + +FT IV L+DG+
Sbjct: 194 LDLSHAVAIPEDSAWFTPGMIV------LIDGVYEEEEETMTMGNGLSGSSGVGGTIGGR 247
Query: 235 FQVITCGFPPLEDRDQSLKL---------------LAGYDFFGGGTLK---------KED 270
FQ G PP E R +L + DF G G+ + +
Sbjct: 248 FQGFFIGQPPCEKRRVTLGVSGPDGTGADHTIGGGFGWIDFLGVGSERAVGSKMRKLEHR 307
Query: 271 TLRLADL--EKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNF 326
LR L + R + VI+ ++ LD + L +L + S P FV GNF
Sbjct: 308 ILRQPALLEDGRPSRGRAVIIGELNLDQPRSLQALRKILGLYASDPEGCTPMTFVLAGNF 367
Query: 327 CSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPST 377
H S S+ + F L +A P L + F+F+PG +D G +T
Sbjct: 368 TQHAVMARGGSGGSIEYKEFFDALASTLADFPSLLTTATFVFVPGDNDGWVSAFSGGAAT 427
Query: 378 VLPRCALPKYLTEELQK 394
LPR +P T +++
Sbjct: 428 PLPRKPVPDLFTSRIRR 444
>gi|28950027|emb|CAD70782.1| related to DNA directed DNA polymerase II chain B [Neurospora
crassa]
Length = 851
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 91/377 (24%), Positives = 148/377 (39%), Gaps = 81/377 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P+ Y+ KKHF + + AS K +R+R+ ++ QR+ R++ F
Sbjct: 238 LKVIHAFDQPRLMYNVGKKHFERDPSKPSLLPAASHKTDAFRNRYNVIHQRILRNEAFQS 297
Query: 153 PSFD-------VVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVE 204
S + S +I+ I +L+G+ G ++G++ L G + DL ++
Sbjct: 298 SSVQGSSLRQRTNANGLSSHKITPIANLLGRHGSNHMLLGMLVVLPTGSLAISDLTGTIT 357
Query: 205 IDLSKAKIT---TGFFTENTIVVAEGEMLVDGI--------------------------- 234
+DLS A + +FT IV L+DG+
Sbjct: 358 LDLSHAVAIPEDSAWFTPGMIV------LIDGVYEEEEETMTMGNGLSGSSGVGGTIGGR 411
Query: 235 FQVITCGFPPLEDRDQSLKL---------------LAGYDFFGGGTLK---------KED 270
FQ G PP E R +L + DF G G+ + +
Sbjct: 412 FQGFFIGQPPCEKRRVTLGVSGPDGTGADHTIGGGFGWIDFLGVGSERAVGSKMRKLEHR 471
Query: 271 TLRLADL--EKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNF 326
LR L + R + VI+ ++ LD + L +L + S P FV GNF
Sbjct: 472 ILRQPALLEDGRPSRGRAVIIGELNLDQPRSLQALRKILGLYASDPEGCTPMTFVLAGNF 531
Query: 327 CSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPST 377
H S S+ + F L +A P L + F+F+PG +D G +T
Sbjct: 532 TQHAVMARGGSGGSIEYKEFFDALASTLADFPSLLTTATFVFVPGDNDGWVSAFSGGAAT 591
Query: 378 VLPRCALPKYLTEELQK 394
LPR +P T +++
Sbjct: 592 PLPRKPVPDLFTSRIRR 608
>gi|336275141|ref|XP_003352324.1| hypothetical protein SMAC_02758 [Sordaria macrospora k-hell]
gi|380092403|emb|CCC10180.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 854
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 90/377 (23%), Positives = 149/377 (39%), Gaps = 81/377 (21%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P+ Y+ KKHF + + AS K +R+R+ ++ QR+ R++ F
Sbjct: 237 LKVIHAFDQPRLTYNVGKKHFERDPSKPSLLPAASHKTDAFRNRYNVIHQRILRNEAFQS 296
Query: 153 PSFD-------VVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASVE 204
S + S +I+ I +L+G+ G ++G++ L G + DL ++
Sbjct: 297 SSVQGSSLRQKTNANGLSSHKITPIANLLGRHGTHHMLLGMLVVLPTGSLAISDLTGTIV 356
Query: 205 IDLSKAKIT---TGFFTENTIVVAEGEMLVDGI--------------------------- 234
+DLS A + +FT +V L+DG+
Sbjct: 357 LDLSHAVAIPEDSAWFTPGMMV------LIDGVYEEEEETMTMGNGLSGSSGVGGTIGGR 410
Query: 235 FQVITCGFPPLEDRDQSLKL---------------LAGYDFFGGGTLK---------KED 270
FQ G PP E R +L + DF G G+ + +
Sbjct: 411 FQGFFIGQPPCEKRRVTLGVSGPDGSGADHTIGGGFGWIDFLGVGSERAVGSKMRKLEHR 470
Query: 271 TLRLADL--EKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVE--VVPSLFVFMGNF 326
LR + L + R + VI+ ++ LD + L +L + S P FV GNF
Sbjct: 471 ILRQSALLEDGRPSRGRAVIIGELNLDQPRSLQALRKILGLYASDPEGCTPMTFVLAGNF 530
Query: 327 CSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPST 377
H S S+ + F L +A P L + F+F+PG +D G +T
Sbjct: 531 TQHAVMARGGSGGSIEYKEFFDALASTLADFPSLLTTATFVFVPGDNDGWVSAFSGGAAT 590
Query: 378 VLPRCALPKYLTEELQK 394
LPR +P T +++
Sbjct: 591 PLPRKPVPDLFTSRIRR 607
>gi|342183733|emb|CCC93213.1| putative DNA polymerase epsilon subunit b [Trypanosoma congolense
IL3000]
Length = 532
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 108/436 (24%), Positives = 174/436 (39%), Gaps = 60/436 (13%)
Query: 6 RKKIQKKMKIRGYGLRMDAL----DEILSFVNRFPDAEDEAIDLLL--------DQFEHE 53
R +IQ + Y L AL D +++ + + DL L D+F E
Sbjct: 4 RTEIQLLARAHQYRLHPLALRGVSDHLIALKGDYERQRSDLRDLFLLLHKVCGPDRFVDE 63
Query: 54 SSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHF 113
+KS+I LL A + GS ++ + V + R IK
Sbjct: 64 EKMKSAI-----------ALLSTRAQGTFEEGSPVVLVSLEDVPHVFVDE-RSGEIKVSV 111
Query: 114 YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEF--GSCEISTIQ 171
+H E + AL++ R+L +R R F R D G C +
Sbjct: 112 VKH--------ECNRLTALHQ-RYLFARRRCLRSGLFCR---DTARHSLLEGVCPLIPTI 159
Query: 172 SLVG--QTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGE 228
+L G T V+G+I + + G +LEDL V I +A + G + +VVA+G+
Sbjct: 160 ALEGIDPTETVAVLGMIVKHDKG-IHLEDLHGRVSIIFHEAMRPPMGLVGDGFLVVAKGQ 218
Query: 229 MLVDGIFQVITCGFPPLEDRDQSLKLLAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFV 287
G F ++ PP E R+ LK + D FG LR EK + + +
Sbjct: 219 W-TSGAFVALSIDLPPAERREDMLKDIGSDCDLFGRRPNDVNAALRR---EKNSLGSVII 274
Query: 288 ILSDIWLDNEEVMGKLEVVLDGFES---VEVVPSLFVFMGNFCSHPCNLS--------FH 336
++S I LD + L V L ++ E++ + V +G FCS + F
Sbjct: 275 VMSQIHLDQRSTVESLIVFLREMQNRSEAELMDTTLVMVGEFCSSSIHYDDVLHLPEPFE 334
Query: 337 SFSSLRLQFGKLGQMIAAH-PRLKEHSRFLFIPGPDDAGPST-VLPRCALPKYLTEELQK 394
+ L MIA H P + ++++ +PG +D +LP+ + + LQ
Sbjct: 335 GCDRYKSLLNTLATMIAVHAPSVAQYTQVAIVPGQNDVTSLLGLLPQPPIVSAFGKSLQS 394
Query: 395 YIPNAIFSSNPCRLNF 410
+ +F+SNPCRL F
Sbjct: 395 RLKRVVFASNPCRLRF 410
>gi|148704672|gb|EDL36619.1| polymerase (DNA directed), epsilon 2 (p59 subunit), isoform CRA_a
[Mus musculus]
Length = 217
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 107/214 (50%), Gaps = 24/214 (11%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A + + + E +E + ++D E + L S++I++
Sbjct: 16 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQP-LSSNMIERS 74
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
V EAA + S S +I AF +P+F Y+S +K F HA
Sbjct: 75 VV----------EAAVQECSQSMDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHA 124
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSC-EISTIQSLVGQ 176
+ G A KA LY +R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 125 AP-TLFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGS 183
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDL 207
T G V+G+I+QL++G F+LED +V++DL
Sbjct: 184 TSKVGDVIVLGMITQLKEGKFFLEDPTGTVQLDL 217
>gi|119188407|ref|XP_001244810.1| hypothetical protein CIMG_04251 [Coccidioides immitis RS]
Length = 610
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 180/430 (41%), Gaps = 84/430 (19%)
Query: 52 HESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKK 111
H S+ S +D +R S+ LQ + IRV++AF P+ Y+ K+
Sbjct: 128 HSSTEMSYPLD----DRSKSIDLQGGVCEDNIFSPNDPRQWIRVVNAFDQPRLLYNMDKR 183
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSF----------DVVNSE 161
+F S + +S++ +RDR+ ++QRV R+ F +PS ++
Sbjct: 184 NFALSPSSASVFPSSSSRIDAFRDRYNRVYQRVLRNSAFRQPSTVSRQSRQLESSTSSTN 243
Query: 162 FGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENT 221
GS ++ + SL G+ R+ GV E +++ + V+ + + + ++G +
Sbjct: 244 KGSYSLTFVSSLQGRPDLRFAKGVP---EGETWFVPGMVLLVD-GIYEEQTSSGPLPSIS 299
Query: 222 IVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKL----------LAGY---DFFGGGTLKK 268
+ F ++ PP E R+ SL+ + G+ DF G G+ +
Sbjct: 300 GGIGGNIGGR---FVALSVAGPPCERRELSLETNSSSDHSSAPIGGFGWTDFLGVGSRRA 356
Query: 269 EDTLRLADLEKRA----------ANDMFVILSDIWLDNEEVMGKLEVVLDGFES--VEVV 316
E R+ ++++ A ++SD+ L+N + + L VL + + +E
Sbjct: 357 EGN-RMRQIKQQCFETSSPISAHARTQIALMSDVNLNNPKTLQGLSNVLQVYNNLPIERT 415
Query: 317 PSLFVFMGNFCSHP--------CNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIP 368
P FV +G+F C++++ F +L +++ RL ++S F+F+P
Sbjct: 416 PLAFVLIGDFAQQAIMTGKEGACSVTYKGL------FDRLAIILSNCSRLLQNSTFIFVP 469
Query: 369 GPDD-------AGPSTVLPRCALPKYLTEELQKYIP----------------NAIFSSNP 405
G +D AG + +PR +P T +++ AI++SNP
Sbjct: 470 GDNDPWASNFCAGAAPPVPRGPIPDLFTSRVRRAFTVANAETQSCRAAHRGGEAIWTSNP 529
Query: 406 CRLNFLITVQ 415
RL+ VQ
Sbjct: 530 ARLSIFGPVQ 539
>gi|171691747|ref|XP_001910798.1| hypothetical protein [Podospora anserina S mat+]
gi|170945822|emb|CAP72622.1| unnamed protein product [Podospora anserina S mat+]
Length = 818
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 98/424 (23%), Positives = 165/424 (38%), Gaps = 104/424 (24%)
Query: 83 DSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
+ GS ++V+ AF P+F Y+ KKHF + + S K +R+R+ ++ Q
Sbjct: 235 EDGSKDARRWLKVVSAFEQPRFTYNVAKKHFERITTPPSLLPPPSHKTDSFRNRYHIIHQ 294
Query: 143 RVSRDQHFSRPSFDVVNSEFGSC-----EISTIQSLVGQTG-RRWVMGVISQLEDGHFYL 196
R+ R++ F + + + +I+ I +L+G+ G ++G++ L G +
Sbjct: 295 RLLRNESFQTSAVTSFSRSSSNASFRSHKITPIANLLGRHGTTHLLLGMLIVLPTGALAI 354
Query: 197 EDLAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI------------------- 234
DL ++ +DLS A + +FT IV LVDGI
Sbjct: 355 SDLTGAITLDLSHAAAIPHDSAWFTPGMIV------LVDGIYEEEEESVGKGLSGSSGVG 408
Query: 235 ------FQVITCGFPPLEDRDQSLKL-----LAG------------YDFFGGGTLKKEDT 271
FQ G PP E R +L + +AG DF G G+ + +
Sbjct: 409 GTIGGRFQGFFIGQPPCEKRRATLGVSGLDGMAGDEEHTIGGGFGWIDFLGVGSERAIGS 468
Query: 272 LRLADLEKR--------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFV 321
++ LE+R VIL ++ LD + L+ VL + + P F+
Sbjct: 469 -KMRKLEQRLLRQQPAGQQRSRIVILGELNLDQPRSLQALKKVLSLYATDGEGETPMSFI 527
Query: 322 FMGNFCSHPCN-LSFHSFS-----------SLRLQFGKLGQMIAAHPRLKEHSRFLFIPG 369
GNF S C ++ H + F L +A P L + F+F+PG
Sbjct: 528 ITGNFTS--CGVMASHGGGATTGTGGAGSIEYKEYFDALASTLADFPTLLTTATFVFVPG 585
Query: 370 PDD-------AGPSTVLPRCALPKYLTEELQKYIP---------------NAIFSSNPCR 407
+D G + LPR +P T +++ A+++SNP R
Sbjct: 586 DNDGWVSAFGGGAAVPLPRRGVPGLFTSRVRRTFAAANQEAGLTGEKKGGEAVWTSNPSR 645
Query: 408 LNFL 411
L+
Sbjct: 646 LSLF 649
>gi|71412173|ref|XP_808284.1| DNA polymerase epsilon subunit B [Trypanosoma cruzi strain CL
Brener]
gi|70872457|gb|EAN86433.1| DNA polymerase epsilon subunit B, putative [Trypanosoma cruzi]
Length = 534
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 29/305 (9%)
Query: 127 SAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTG-----RRW 181
S + + R R+L +R R F R +N + + ++ + S + G
Sbjct: 118 SDRFTVLRQRYLFTRRRCLRSGLFRRD----LNKQSLNQDLPPLLSTIALEGIDPSENVA 173
Query: 182 VMGVISQLEDGHFYLEDLAASVEID-LSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I + + LEDL V + L GF + V+ G+ G+ V++
Sbjct: 174 VLGMIRRRLN-EICLEDLHGRVRLTFLGGVPPLIGFVGDGFFVLVRGQW-SSGVLVVVSI 231
Query: 241 GFPPLEDRDQSLKLLAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
PP E R+ +L+ + YD FG + D EK + + +++S + LD
Sbjct: 232 ELPPAERREDTLRDIGSDYDLFG---YRPTDMAAAHLREKNSLQAVIIVMSHVHLDQTST 288
Query: 300 MGKLEVVLDGFES---VEVVPSLFVFMGNFCS---HPCNLS-----FHSFSSLRLQFGKL 348
+ KL ++ E++ + V +G+F S H ++S F + +L L
Sbjct: 289 VNKLVYFFKEMQNRTESELMNTTLVMVGDFSSSTIHYDDISHLPDPFEGSNRYKLLMDTL 348
Query: 349 GQMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPC 406
+I H P + +H++ + +PGP+D G VLP+ + T LQ + F+ NPC
Sbjct: 349 AMVITTHAPSVAQHTQVVLVPGPNDVTGLLGVLPQPPIVSVFTRTLQARLKKIFFAPNPC 408
Query: 407 RLNFL 411
RL F
Sbjct: 409 RLRFF 413
>gi|148704673|gb|EDL36620.1| polymerase (DNA directed), epsilon 2 (p59 subunit), isoform CRA_b
[Mus musculus]
Length = 234
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 114/253 (45%), Gaps = 45/253 (17%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKE 64
R + K+RG LR +A + + + E +E + ++D E + L S++I++
Sbjct: 10 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTELELEENLGKIIDAVEKQP-LSSNMIERS 68
Query: 65 SVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----QHA 117
V EAA + S S +I AF +P+F Y+S +K F HA
Sbjct: 69 VV----------EAAVQECSQSMDETIEHVFNIIGAFDIPRFIYNSERKKFLPLSMTNHA 118
Query: 118 GSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLVGQ 176
+ G A KA LY +R+ +L QR R + F+ P E GS ++ TI++L+G
Sbjct: 119 APT-LFGTARDKAELYLERYTILHQRTHRHELFTPPVIGSHLEESGSKFQLKTIETLLGS 177
Query: 177 T---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233
T G V+G+I+QL++ H +G +TE V+AEG D
Sbjct: 178 TSKVGDVIVLGMITQLKEFH--------------------SGLYTEACFVLAEG-WFEDQ 216
Query: 234 IFQVITCGFPPLE 246
+F GFPP E
Sbjct: 217 VFHANAFGFPPTE 229
>gi|407405955|gb|EKF30683.1| DNA polymerase epsilon subunit b, putative [Trypanosoma cruzi
marinkellei]
Length = 534
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 20/245 (8%)
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDL-SKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240
V+G+I + + +LEDL V + GF + V+ G+ G+ V++
Sbjct: 174 VLGMIRRRLN-EIFLEDLHGRVRLTFCGDVPPLIGFVGDGFFVLVRGQW-SSGVLTVVSI 231
Query: 241 GFPPLEDRDQSLKLLAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV 299
PP E R+ +L+ + YD FG + D EK + + +++S + LD
Sbjct: 232 ELPPAERREDTLRDIGSDYDLFG---YRPTDVAAAHLREKNSLQTVIIVMSHVHLDQTST 288
Query: 300 MGKLEVVLDGFES---VEVVPSLFVFMGNFCS---HPCNLS-----FHSFSSLRLQFGKL 348
+ KL ++ E++ + V +G+F S H ++S F +L L
Sbjct: 289 VNKLAYFFKEMQNRTESELMNTTLVMVGDFSSSTIHYEDISHLPDPFEGSDRYKLLMDTL 348
Query: 349 GQMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPC 406
+IA H P + +H++ + +PG +D G V+P+ + T+ LQ + F+ NPC
Sbjct: 349 AMVIATHAPSVAQHTQVVLVPGSNDFTGLLGVIPQPPIVSVFTKTLQARLKKVFFAPNPC 408
Query: 407 RLNFL 411
RL F
Sbjct: 409 RLRFF 413
>gi|323447743|gb|EGB03654.1| hypothetical protein AURANDRAFT_72694 [Aureococcus anophagefferens]
Length = 673
Score = 74.7 bits (182), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 110/239 (46%), Gaps = 42/239 (17%)
Query: 203 VEIDLSKAKITTGFFTENTIVVAEGEMLVDG-IFQVITCGFPPLEDRDQSLKLLAG--YD 259
V++D+S+A+ GFF E +++AEG M +DG +F V G PP E RD + + + G D
Sbjct: 335 VKLDISRAETFGGFFAEGMVIIAEGSMGLDGEVFIVDALGHPPFEPRDLAFRAVGGRHLD 394
Query: 260 FFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF--------- 310
F D R A ++++++ LD+ + +L +L G
Sbjct: 395 VFLNNCGVDRDMSRDAP---------WLVIANCHLDSPAALPRLRSLLVGLALPICEHYC 445
Query: 311 ESVEVVPS--LFVFMGNFCSHP-CNLSFHSF-SSLRLQFGKLGQMIAAHPRLKEHSR--- 363
+ E VP + +F+G+F S N S SS R +FG+LG + A P L
Sbjct: 446 TTKEKVPKRPVIIFLGDFTSRTSANSGAQSVTSSYRFRFGELGAALCA-PELDIGQESMA 504
Query: 364 ----FLFIPGPDD--AGPSTVLPRCALPKYLTEELQKYI------PNAIFSSNPCRLNF 410
+FIPGP+D AG S LPR L + + L I IF+++P R F
Sbjct: 505 SLIDLVFIPGPNDPVAG-SPALPRGRLLQQAIQPLVDRIKIKTNGTAPIFTTSPARFRF 562
>gi|149051335|gb|EDM03508.1| rCG61685 [Rattus norvegicus]
Length = 231
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 115/255 (45%), Gaps = 49/255 (19%)
Query: 6 RKKIQKKMKIRGYGLRMDA---LDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIID 62
R + K+RG LR +A L E L V +E ++ ++D E + L S++I+
Sbjct: 7 RSRTVSAFKLRGLLLRSEATKYLTEALQSVTE--LELEENLEKIIDAVEKQP-LSSNMIE 63
Query: 63 KESVNRVTSVLLQAEAAAEGDSGSASN--HSAIRVIDAFLVPKFRYDSIKKHFY-----Q 115
+ V EAA + S S +I AF +P F Y+S +K F
Sbjct: 64 RSVV----------EAAVQECSQSVDETIEHIFNIIGAFDIPHFIYNSERKKFLPLSMTN 113
Query: 116 HAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGS-CEISTIQSLV 174
HA I G A KA LYR+R+ +L QR R + F+ P E GS ++ TI++L+
Sbjct: 114 HAAPT-IFGTARDKAELYRERYTILHQRTHRHELFTPPVIGSHPDESGSKFQLKTIETLL 172
Query: 175 GQT---GRRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLV 231
G T G V+G+I+QL++ H +G +TE V+AEG
Sbjct: 173 GSTSKVGDVIVLGMITQLKEFH--------------------SGLYTEACFVLAEG-CFE 211
Query: 232 DGIFQVITCGFPPLE 246
D +F GFPP E
Sbjct: 212 DQVFHANAFGFPPTE 226
>gi|159489516|ref|XP_001702743.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280765|gb|EDP06522.1| predicted protein [Chlamydomonas reinhardtii]
Length = 138
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 29/50 (58%), Positives = 40/50 (80%)
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
SRF+F+PGPDDAGP+ VLP+ LP+ LT +L++ +P A F+SNPCRL +
Sbjct: 7 QSRFVFMPGPDDAGPAGVLPQPPLPRSLTTDLRRVLPTAHFASNPCRLRY 56
>gi|407862952|gb|EKG07790.1| DNA polymerase epsilon subunit b, putative [Trypanosoma cruzi]
Length = 534
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 19/231 (8%)
Query: 196 LEDLAASVEID-LSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKL 254
LEDL V + L GF + V+ G+ G+ V++ PP E R+ +L+
Sbjct: 187 LEDLHGRVRLTFLGGVPPLIGFVGDGFFVLVRGQW-SSGVLVVVSIELPPAERREDTLRD 245
Query: 255 LAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFES- 312
+ YD FG + D EK + + +++S + LD + KL ++
Sbjct: 246 IGSDYDLFG---YRPTDMAAAHLREKNSLQAVIIVMSHVHLDQTSTVNKLVCFFKEMQNR 302
Query: 313 --VEVVPSLFVFMGNFCS---HPCNLS-----FHSFSSLRLQFGKLGQMIAAH-PRLKEH 361
E++ + V +G+F S H ++S F + +L L +I H P + +H
Sbjct: 303 TESELMNTTLVMVGDFSSLTIHYDDISHLPDPFEGSNRYKLLMDTLAMVITTHAPSVAQH 362
Query: 362 SRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
++ + +PG +D G VLP+ + T LQ + F+ NPCRL F
Sbjct: 363 TQVVLVPGSNDVTGLLGVLPQPPIVSVFTRTLQARLKKVFFAPNPCRLRFF 413
>gi|71652067|ref|XP_814698.1| DNA polymerase epsilon subunit B [Trypanosoma cruzi strain CL
Brener]
gi|70879693|gb|EAN92847.1| DNA polymerase epsilon subunit B, putative [Trypanosoma cruzi]
Length = 534
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 19/231 (8%)
Query: 196 LEDLAASVEID-LSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKL 254
LEDL V + L GF + V+ G+ G+ V++ PP E R+ +L+
Sbjct: 187 LEDLHGRVRLTFLGGVPPLIGFVGDGFFVLVRGQW-SSGVLVVVSIELPPAERREDTLRD 245
Query: 255 LAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFES- 312
+ YD FG + D EK + + +++S + LD + KL ++
Sbjct: 246 IGSDYDLFG---YRPTDMAAAHLREKNSLQAVIIVMSHVHLDQTSTVNKLVCFFKEMQNR 302
Query: 313 --VEVVPSLFVFMGNFCS---HPCNLS-----FHSFSSLRLQFGKLGQMIAAH-PRLKEH 361
E++ + V +G+F S H ++S F + +L L +I H P + +H
Sbjct: 303 TESELMNTTLVMVGDFSSSTIHYDDISHLPDPFEGSNRYKLLMDTLAMVITTHAPSVAQH 362
Query: 362 SRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
++ + +PG +D G VLP+ + T LQ + F+ NPCRL F
Sbjct: 363 TQVVLVPGSNDVTGLLGVLPQPPIVSVFTRTLQARLKKVFFAPNPCRLRFF 413
>gi|322699970|gb|EFY91728.1| putative DNA directed DNA polymerase II chain B [Metarhizium
acridum CQMa 102]
Length = 759
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 154/403 (38%), Gaps = 102/403 (25%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
+ V++AF P+ ++ K LP AS K ++R+R+ ++ QR+ R + F
Sbjct: 211 LNVVNAFEQPRL-VETTKPSL------LP---PASHKTTVFRNRYQVIHQRLLRSEAFQT 260
Query: 153 PSFDVVN--------SEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLEDLAASV 203
S S S +I+ I +++G+ G ++G + L G + DL ++
Sbjct: 261 SSVSSSRKRALQRSLSNQQSLKITPIANMLGRHGSNHMLLGQLIILPTGDLAISDLTGTI 320
Query: 204 EIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI-------------------------F 235
+DLS A + +F +V LVDG+ F
Sbjct: 321 ALDLSHAVAIPEDSAWFCPGMVV------LVDGVYEEEEESVGTGLSGSSGVGGTLGGRF 374
Query: 236 QVITCGFPPLEDRDQSLKL--------------LAGYDFFGGGTLKKEDTLRLADLEKR- 280
Q G PP E R +L + DF G G+ ++ ++ +E+R
Sbjct: 375 QGFFIGQPPCEKRQATLGISGPEGGQDHTIGGGFGWIDFLGVGS-ERAVGAKMRRIERRL 433
Query: 281 ---------AANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMGNFCSH 329
VI+ ++ LD + L VL + E P FV GNF H
Sbjct: 434 MHHQQSQDAPGRGRAVIVGELNLDQPRALQALRKVLSLYAAEPQGSAPVTFVLAGNFTQH 493
Query: 330 PCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLP 380
S S+ + F L ++ P L + S F+F+PG +D AG S LP
Sbjct: 494 AVMARGGSGGSIEYKEYFDALASALSDFPTLLQASTFVFVPGDNDGWASSFAAGASVPLP 553
Query: 381 RCALPKYLTEELQKYIP-------------NAIFSSNPCRLNF 410
R +P T +++ +A+++SNP R+
Sbjct: 554 RKPVPDMFTSRIRRAFATANSEAGSHGVHGSAVWTSNPSRVTL 596
>gi|353228610|emb|CCD74781.1| putative DNA polymerase epsilon subunit b [Schistosoma mansoni]
Length = 570
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 106/254 (41%), Gaps = 32/254 (12%)
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241
V+G+ISQL +G +Y ED + V+++L +A G E +I + EG + I V G
Sbjct: 128 VLGLISQLREGKWYAEDPSGIVQLNLQQAVFHEGLLPEGSIALIEG-FYDEKILYVTGIG 186
Query: 242 FPPLEDRDQSLKLLAGYDFFGGGTLKKEDTL---------RLADLEKRAANDMFVILSDI 292
PP E + S + + + FGG D+L +L + ++ M VIL +
Sbjct: 187 LPPCEPPEISRRAFSVGNPFGG--CDTSDSLAASLDTKMHKLLTTTQAGSDAMLVILGET 244
Query: 293 WLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNF---------CSHPCNLSFHSFSSLRL 343
LD + + +L + G+ + P F+ GNF C+ + L
Sbjct: 245 NLDRPDTLDQLTTLFSGYST--CAPVAFILSGNFLSADSIGKTCTERRLILRRLLRQLIT 302
Query: 344 QF-GKLGQMIAAHPRLKEHS-RFLFIPGPDDA--GPSTVLPRCALPKYLTEELQ-----K 394
F + H S + + IPGP+D P +LPR L L + +
Sbjct: 303 IFKNNFPDSESQHTSQSNQSPKLILIPGPEDPVYAPKHILPRPGLGIDLISDNKDRSSSS 362
Query: 395 YIPNAIFSSNPCRL 408
P +SNPCRL
Sbjct: 363 CPPWLHLASNPCRL 376
>gi|380804695|gb|AFE74223.1| DNA polymerase epsilon subunit 2 isoform 2, partial [Macaca
mulatta]
Length = 207
Score = 71.6 bits (174), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 317 PSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS 376
P+ F+ GNF S P + +L+ L +I +P + + SRF+F+PGP+D G
Sbjct: 3 PTCFILCGNFSSAP--YGKNQVQALKDSLKTLADIICEYPDIHQSSRFVFVPGPEDPGFG 60
Query: 377 TVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
++LPR L + +T E ++ +P ++F++NPCR+ +
Sbjct: 61 SILPRPPLAESITNEFRQRVPFSVFTTNPCRIQY 94
>gi|322709063|gb|EFZ00640.1| putative DNA directed DNA polymerase II chain B [Metarhizium
anisopliae ARSEF 23]
Length = 756
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 141/371 (38%), Gaps = 93/371 (25%)
Query: 126 ASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVN--------SEFGSCEISTIQSLVGQT 177
AS K ++R+R+ ++ QR+ R + F S S S +I+ I +++G+
Sbjct: 231 ASHKTTVFRNRYQVIHQRLLRSEAFQTSSVSSSRKRALQRSLSNQQSLKITPIANMLGRH 290
Query: 178 G-RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDG 233
G ++G + L G + DL ++ +DL +A + +F +V LVDG
Sbjct: 291 GSNHMLLGQLVILPTGDLAISDLTGTIALDLGQAVAIPQDSAWFCPGMVV------LVDG 344
Query: 234 I-------------------------FQVITCGFPPLEDRDQSLKL-------------- 254
+ FQ G PP E R +L +
Sbjct: 345 VYEEEEESVGKGLSGSSGVGGTLGGRFQGFFIGQPPCEKRQATLGISGPEGGQDHTIGGG 404
Query: 255 LAGYDFFGGGTLKKEDTLRLADLEKR----------AANDMFVILSDIWLDNEEVMGKLE 304
DF G G+ ++ ++ +E+R V++ ++ LD + L
Sbjct: 405 FGWIDFLGVGS-ERAVGAKMRRIERRLMHQQPSQDAPGRGRAVVVGELNLDQPRALQALR 463
Query: 305 VVLDGF--ESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKE 360
+L + E P FV GNF H S S+ + F L ++ P L +
Sbjct: 464 KILSLYAAEPQGSAPVTFVLAGNFTQHAVMARGGSGGSIEYKEYFDALASALSDFPTLLQ 523
Query: 361 HSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIP--------------NA 399
S F+F+PG +D AG S LPR +P T +++ +A
Sbjct: 524 ASTFVFVPGDNDGWVSSFAAGASVPLPRKPVPDMFTSRIRRAFATANADAGGGHGVHGSA 583
Query: 400 IFSSNPCRLNF 410
+++SNP RL
Sbjct: 584 VWTSNPSRLTL 594
>gi|320590328|gb|EFX02771.1| oxysterol-binding protein 1 [Grosmannia clavigera kw1407]
Length = 1919
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 160/409 (39%), Gaps = 102/409 (24%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++VI AF P+ D+ K LP S K +++R+RF ++ QR+ R+ F
Sbjct: 277 LQVIGAFDQPRM-LDTSKPSL------LP---NISQKTSVFRNRFNVIHQRLLRNDMFQS 326
Query: 153 PSFDVVNS-------------EFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
+ + + I+ + +L+G+ G ++G++ L G + D
Sbjct: 327 SAVAEARAVATLQSASLSSSSLSQTHRITPVANLLGRHGTHHMLLGMLVVLPTGKLSICD 386
Query: 199 LAASVEIDLSKAKIT---TGFFTENTIVVAEGEM-------------------LVDGIFQ 236
L+AS+ +DLS A + +F IV+ +G + G FQ
Sbjct: 387 LSASITLDLSSAVAIPEDSAWFAPGMIVLVDGVYEEEEESAGRGLNGATGVGGTIGGRFQ 446
Query: 237 VITCGFPPLEDRDQSLKLLA-------------GY-DFFGGGTLKKEDTLRLADLE---- 278
G PP E R SL + G+ DF G G+ ++ R+ LE
Sbjct: 447 AFFMGQPPSEKRRVSLGISGPDGGQDHTIGGGFGWIDFLGVGS-QRAVGARMRKLEQRLL 505
Query: 279 ------------KRAANDMFVILSDIWLDNEEVMGKLEVVLDGF--ESVEVVPSLFVFMG 324
+ V+L ++ LD + + L+ +L + E+ P FV G
Sbjct: 506 QRQQRRGVETQPQHPGRHRVVVLGEVNLDQPQALQALKKILGLYASEAEGSTPVAFVLAG 565
Query: 325 NFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGP 375
+F H S S+ + F L +A P L + + F+F+PG +D AG
Sbjct: 566 SFTEHAVMARGGSGGSIEYKEYFDALASTLADFPSLLQSATFVFVPGDNDGWVSSFGAGA 625
Query: 376 STVLPRCALPKYLTEELQKYIPN--------------AIFSSNPCRLNF 410
+ LPR +P T +++ A++++NP RL+
Sbjct: 626 AVPLPRKPVPDLFTSRVRRAFATANAEAGLADGRGGEAVWTTNPSRLSL 674
>gi|440470474|gb|ELQ39542.1| DNA polymerase epsilon subunit B [Magnaporthe oryzae Y34]
gi|440483283|gb|ELQ63698.1| DNA polymerase epsilon subunit B [Magnaporthe oryzae P131]
Length = 896
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 168/463 (36%), Gaps = 154/463 (33%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++V+ A+ P+ Y+ KKHF + A I AS K L+R+RF ++ QR+ R++ F
Sbjct: 236 LKVVGAYEQPRMVYNVAKKHFERDASKPSILPTASHKTLLFRNRFNVIHQRLLRNEAFQ- 294
Query: 153 PSFDVVNSEFGSC-------------EISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
+ V +++ GS +I+ I +L+G+ G ++G++ + G+ + D
Sbjct: 295 -TSAVADTKRGSLARSTSSLSSQQSYKITPIANLLGRHGSHHMLLGMLVIMPAGNLAVSD 353
Query: 199 LAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI--------------------- 234
L ++ +D+++A + +FT +V L+DG+
Sbjct: 354 LTGTIALDVTQAATIPDDSSWFTPGMVV------LIDGVYEEEDDHTAKGLSGSSGIGGT 407
Query: 235 ----FQVITCGFPPLEDRDQSLKL---------------LAGYDFFGGGTLKKEDTLRLA 275
FQ G PP E R +L + DF G G+ ++ R+
Sbjct: 408 IGGRFQGFFIGQPPCEKRRATLGVSGPEGDGLEHTIGGGFGWIDFLGVGS-ERAMGPRMR 466
Query: 276 DLEKR-------AANDM------------------FVILSDIWLDNEEVMGKLEVVL--- 307
LE+R + DM +IL ++ LD + L +L
Sbjct: 467 KLERRLLRQPQLSRQDMAASVLESTLSSTLPRRGRIIILGELNLDQPRALQALRKILATY 526
Query: 308 ------DGFE-------------SVEVVPSLFVFMGNFCSHPC----------------- 331
DG E + P FV G+F S
Sbjct: 527 ANETDNDGSENDAADETVASTKPNKTTTPLAFVLAGSFSSQAVMARNGAGGGGGGGSAGL 586
Query: 332 -NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCA 383
+ F L +A P L S F+F+PG +D AG + LPR A
Sbjct: 587 TGSGGGGSIEYKEYFDSLAGTLAEFPSLLRESTFVFVPGDNDGWASSFGAGAAVPLPRKA 646
Query: 384 LPKYLTEELQKYIPN----------------AIFSSNPCRLNF 410
+P T +++ A+F++NP R+
Sbjct: 647 VPDLFTSRVRRAFATANAEGTSPRANAPGGEAVFTTNPSRMTL 689
>gi|255722918|ref|XP_002546393.1| hypothetical protein CTRG_05871 [Candida tropicalis MYA-3404]
gi|240130910|gb|EER30472.1| hypothetical protein CTRG_05871 [Candida tropicalis MYA-3404]
Length = 611
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 31/213 (14%)
Query: 94 RVIDAFLVPKFRYDSIKKHF---YQHAGSL--PIHGEASAKAALYRDRFLLLFQRVSRDQ 148
+VI A PK +D +K F YQ SL + AK Y +R+ L+ R+SR++
Sbjct: 136 KVISAKNQPKSVFDPSRKQFDIIYQSDNSLLSKLQDSLPAKVNSYYNRYSLIRDRLSRNE 195
Query: 149 HFSRPS---FDVVNS-EFG---SCEISTIQSLVGQTGRRWVM-GVISQLEDGHFYLEDLA 200
+F + S +NS + G S EIS I++++G+ G+++++ G++ + +G F LED
Sbjct: 196 NFQKTSAMSISALNSIKSGIKQSHEISLIKNMLGRDGQKFLLFGLLCKNNNGEFILEDET 255
Query: 201 ASVEIDLSKAKITTG-------FFTENTIVVAEGEMLVD-------GIFQVITCGFPPLE 246
+E++L++ ++G +F I A G + G F V G PP E
Sbjct: 256 DYIELNLNQTFKSSGCFHCLGMYFLVEGIYSASGSSTSNQDSNYMGGCFYVSNIGHPPSE 315
Query: 247 DRDQSLKLLAGYDFFG----GGTLKKEDTLRLA 275
RD+SL DF G TL E +++++
Sbjct: 316 RRDKSLDYYGNLDFLGIHKQFSTLTGEKSIKIS 348
>gi|389635573|ref|XP_003715439.1| DNA polymerase epsilon subunit B [Magnaporthe oryzae 70-15]
gi|351647772|gb|EHA55632.1| DNA polymerase epsilon subunit B [Magnaporthe oryzae 70-15]
Length = 865
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 98/463 (21%), Positives = 168/463 (36%), Gaps = 154/463 (33%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSR 152
++V+ A+ P+ Y+ KKHF + A I AS K L+R+RF ++ QR+ R++ F
Sbjct: 236 LKVVGAYEQPRMVYNVAKKHFERDASKPSILPTASHKTLLFRNRFNVIHQRLLRNEAFQ- 294
Query: 153 PSFDVVNSEFGSC-------------EISTIQSLVGQTG-RRWVMGVISQLEDGHFYLED 198
+ V +++ GS +I+ I +L+G+ G ++G++ + G+ + D
Sbjct: 295 -TSAVADTKRGSLARSTSSLSSQQSYKITPIANLLGRHGSHHMLLGMLVIMPAGNLAVSD 353
Query: 199 LAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGI--------------------- 234
L ++ +D+++A + +FT +V L+DG+
Sbjct: 354 LTGTIALDVTQAATIPDDSSWFTPGMVV------LIDGVYEEEDDHTAKGLSGSSGIGGT 407
Query: 235 ----FQVITCGFPPLEDRDQSLKL---------------LAGYDFFGGGTLKKEDTLRLA 275
FQ G PP E R +L + DF G G+ ++ R+
Sbjct: 408 IGGRFQGFFIGQPPCEKRRATLGVSGPEGDGLEHTIGGGFGWIDFLGVGS-ERAMGPRMR 466
Query: 276 DLEKR-------AANDM------------------FVILSDIWLDNEEVMGKLEVVL--- 307
LE+R + DM +IL ++ LD + L +L
Sbjct: 467 KLERRLLRQPQLSRQDMAASVLESTLSSTLPRRGRIIILGELNLDQPRALQALRKILATY 526
Query: 308 ------DGFE-------------SVEVVPSLFVFMGNFCSHPC----------------- 331
DG E + P FV G+F S
Sbjct: 527 ANETDNDGSENDAADETVASTKPNKTTTPLAFVLAGSFSSQAVMARNGAGGGGGGGSAGL 586
Query: 332 -NLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD-------AGPSTVLPRCA 383
+ F L +A P L S F+F+PG +D AG + LPR A
Sbjct: 587 TGSGGGGSIEYKEYFDSLAGTLAEFPSLLRESTFVFVPGDNDGWASSFGAGAAVPLPRKA 646
Query: 384 LPKYLTEELQKYIPN----------------AIFSSNPCRLNF 410
+P T +++ A+F++NP R+
Sbjct: 647 VPDLFTSRVRRAFATANAEGTSPRANAPGGEAVFTTNPSRMTL 689
>gi|440631955|gb|ELR01874.1| hypothetical protein GMDG_05061 [Geomyces destructans 20631-21]
Length = 728
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 163/438 (37%), Gaps = 122/438 (27%)
Query: 86 SASNHSAIR----VIDAFLVPKFRYDSIKKHFYQ---HAGSLPIHGEASAKAALYRDRFL 138
+A N S IR VI A P+ Y+ KHF + A LP+ ++K L+R+R+
Sbjct: 152 TAGNLSGIRSHMKVIGAREQPRLLYNFKTKHFDKINTKASLLPL---TASKTQLFRNRYN 208
Query: 139 LLFQRVSRDQHFSRPSFDVVNSEFGSC----------EISTIQSLVGQTGR-RWVMGVIS 187
++ QR+ R + F P+ + + S ++ I +L+G++G ++G+++
Sbjct: 209 IIHQRLLRTESFQVPTANRAPTLHRSSSSMITAQQTHRLTPIANLLGRSGSPHLLLGLLT 268
Query: 188 QLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGI------------- 234
G L DL S+ +DL+ A+++ + T V +LVDGI
Sbjct: 269 ISPTGTLALSDLTGSISLDLTHAQVSE---PDATWFVPGMVVLVDGIYEDEDLTTGSVLG 325
Query: 235 ------------FQVITCGFPPLEDRDQSLKLLA---GYDFFGGGTLKKEDTLRLADLEK 279
F G P E R +L + G D GG D L + +
Sbjct: 326 GGGGIGGTVGGKFIGTMIGTPIAEKRHTTLGTVGEDEGGDITTGGGFGWVDFLGVGSERE 385
Query: 280 RAAN--------------------------------------DMFVILSDIWLDNEEVMG 301
R + IL D+ LDN +
Sbjct: 386 RGQSMREQESQIFSPPPPPPLFDSQSRPETQPASASASVPNRGHIAILGDLTLDNPHTVS 445
Query: 302 KLEVVLDGFE--SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPR 357
L VL + +E +P F+ +GNF S P +L+ + + + F L ++ P
Sbjct: 446 ALAKVLSVYSLLPLEALPMTFILLGNFISQP-SLALAATGPVEYKEYFDILAATLSNFPV 504
Query: 358 LKEHSRFLFIPGPDD-------AGPSTVLPRCALPKYLTEELQKYIPN------------ 398
L + F+F+PG D AG + LP +P T + K
Sbjct: 505 LLSNCTFVFVPGDHDAWNSSFSAGAAGPLPYEPVPSIFTTRVHKAFVTANSEAKKDAGAN 564
Query: 399 --------AIFSSNPCRL 408
AI++SNP RL
Sbjct: 565 APPRVDGEAIWTSNPARL 582
>gi|169612808|ref|XP_001799821.1| hypothetical protein SNOG_09531 [Phaeosphaeria nodorum SN15]
gi|160702589|gb|EAT82796.2| hypothetical protein SNOG_09531 [Phaeosphaeria nodorum SN15]
Length = 552
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 120/300 (40%), Gaps = 74/300 (24%)
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKI---TTGFFTENTIVVAEGEMLVD-GI--- 234
++G+++ G L DL ++ +D+ A+ T +F IV+ EG D G+
Sbjct: 89 LLGMLTVSPAGALSLSDLTGTIVLDIQHARPIPETGAYFAPGMIVLVEGSYEEDSGVSST 148
Query: 235 --------------FQVITCGFPPLEDRDQSL--------KLLAG-----YDFFGGGTLK 267
F + G PP E R +L LAG DF G G+ +
Sbjct: 149 LGGTGGIGGTIGGKFLGFSVGHPPCERRTATLGGTDEIDKSSLAGPAFGWTDFLGVGSQR 208
Query: 268 KEDTL------RLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVL-----DGFESVEVV 316
+ +L D E+ A N VI SD+ LD + L +L D + V
Sbjct: 209 ATGSRMNKIGSKLLDPEQ-AHN--IVIASDLHLDVPATLTALRTLLRTHTPDPTAAHPVY 265
Query: 317 PSLFVFMGNFCSHPCNLSFHSFSSLRLQ--FGKLGQMIAAHPRLKEHSRFLFIPGPDDAG 374
P + MGNF S S+ + F L ++A P+L H+ +FIPG +DA
Sbjct: 266 PLAIILMGNFSSKASLAGVPGAGSIEYKEHFDALASVLADFPQLIAHTTLVFIPGDNDAW 325
Query: 375 PS-------TVLPRCALPKYLTEELQKYIPNA-----------------IFSSNPCRLNF 410
PS T LPR +P T +++ I A I++SNP RL++
Sbjct: 326 PSAFLSGAATPLPRKPVPALFTNRIRRVIAEANREVWGAGKAKGKEGEVIWTSNPSRLSW 385
>gi|118363234|ref|XP_001014793.1| hypothetical protein TTHERM_00048980 [Tetrahymena thermophila]
gi|89296609|gb|EAR94597.1| hypothetical protein TTHERM_00048980 [Tetrahymena thermophila
SB210]
Length = 637
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 123/291 (42%), Gaps = 48/291 (16%)
Query: 167 ISTIQSLVGQTGRRWV-MGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVA 225
++ I SL+G G+ +G+I + G +Y++D + V+I+L +A++ G+ T +IV+A
Sbjct: 220 LNDIGSLIGSKGKEMCCLGMIYEGVPGDYYMQDEFSRVKINLEQAQVELGYVTVTSIVIA 279
Query: 226 EGEM-LVDGIFQVITCGFPPLEDR---DQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRA 281
+G + G F + P E+ + S+ DFFG + +L LE +
Sbjct: 280 KGVFDQMQGAFVISKLMLPEFEEEVNLNPSVFKKESSDFFGAKAKVQRILGKLIQLEIES 339
Query: 282 A------------------------------NDMF----------VILSDIWLDNEEVMG 301
A N F + SD + + +
Sbjct: 340 ASLGKQGSRAQNLTRFQKERQLEMGIFDLDLNPYFQVSEKNEYCVCVFSDFLISDRNTLK 399
Query: 302 KLEVVLDGFESVEVVPSLFVFMGNFCS-HPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKE 360
K E +L +ES ++ P + + MG F + N F + ++ ++ L++
Sbjct: 400 KFEGILQVYES-QLKPLVIILMGAFFNVSEINSEFVN-DQVKEAINDFLNLLNKFKSLRD 457
Query: 361 HSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFL 411
+ ++ +P +D G V P+ LP++L E++ IP NPCRL+ L
Sbjct: 458 NCYWIMVPHINDIGGMPVQPKSELPEHLFTEIKSIIPFFKLVQNPCRLSIL 508
>gi|403221851|dbj|BAM39983.1| uncharacterized protein TOT_020000250 [Theileria orientalis strain
Shintoku]
Length = 616
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 123/267 (46%), Gaps = 51/267 (19%)
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEML-VDGIFQVIT 239
++G +++ ++G ++ ++I LSK KI++G + +V+ G ML D IF V +
Sbjct: 233 LIGNLAKSKEGDLCMQGCLVEMKIRLSKDCKISSGIYCYGQVVIVFGTMLPFDNIFAVKS 292
Query: 240 CGFPPLEDRDQSLKLLAGYDFFGGGTLKKE-----DTLRLADLEKRAANDMFVILSDIWL 294
PPL +++ L+ + FGG E + + L L+ ++ +VI+SD+ L
Sbjct: 293 LTHPPLTNKNN----LSHLNLFGGLHSPMELAMFKECVNLPSLKNISSK--WVIISDLHL 346
Query: 295 DNEEVMGKLEVVLDGF-ESV--EVVPSLFVFMGNFCSHPCNLSFH--------------- 336
D + LE + + + ES E +P+ FVFMGNF S N H
Sbjct: 347 DRASNIQSLEKLFNSYVESYNKEQLPAGFVFMGNFSSSGYNFDLHHNWTDELDKKANASH 406
Query: 337 --SFSSLRLQFGKLGQMIAAHPR---LKEHSRFLFIPGPDDAG------PSTVLPRCALP 385
S+SS F L +++ P+ + +F+PGP DA P L A+
Sbjct: 407 ADSYSS---GFENLFKLLTK-PKFIMILTCCYIVFVPGPKDASLCRQRIPRNPLLSFAIN 462
Query: 386 KYLTEELQKYIPNA----IFSSNPCRL 408
++ E L+ P I +SNPCR+
Sbjct: 463 RF-KERLESTRPECLGHIIMASNPCRI 488
>gi|300122874|emb|CBK23881.2| unnamed protein product [Blastocystis hominis]
Length = 165
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 262 GGGTLKKEDTLR--LADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSL 319
G G K+ R + +EKR + +ILSD++LD +V +L+ + + PS
Sbjct: 2 GNGVEKENRNNRGNESSIEKRIESPSLLILSDVFLDRSDVFDRLKELFTKHADDSLPPS- 60
Query: 320 FVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVL 379
F+F G+F S ++ L F L ++IA+ PRL EH+ F+F+PG D G + +
Sbjct: 61 FLFCGDFVSSNFSVDSAGIRRLLRLFTSLAELIASFPRLVEHAHFIFVPGTRDVGANGLF 120
Query: 380 PRCALPKYLTEELQKYI 396
PR + + L + +++
Sbjct: 121 PREPVQRTLQIQCCRFL 137
>gi|209880952|ref|XP_002141915.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
gi|209557521|gb|EEA07566.1| DNA polymerase epsilon subunit B family protein [Cryptosporidium
muris RN66]
Length = 542
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 126/295 (42%), Gaps = 54/295 (18%)
Query: 167 ISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASV--EIDLSKAKITTGFFTENTIVV 224
I +I+ L G G +G++++ E+ H YLED + +ID + G + + IVV
Sbjct: 120 IHSIKQLHGTNGNVTCLGMLNRDEENHLYLEDTNCLIRLKIDTNVTLFGPGIYCCDHIVV 179
Query: 225 AEGEM-LVDGIFQVITCGFPPLEDR---------DQSLKLLAGY-DFFGGG--------- 264
G + + F V PP + D S K Y D F
Sbjct: 180 THGYLDKISNFFVVKYMFHPPYFSKSKDISKLILDNSTKSSLLYRDIFKSNFENSKVGCL 239
Query: 265 --------------TLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGF 310
T K + + +L D+++I+SD+ N V+ L+ V G+
Sbjct: 240 PLLRPHIPQTPNFDTQKDQISNNNEELNISKTIDLWIIISDVVFTNSVVLTSLDEVFSGY 299
Query: 311 E-SVEVVPSL--FVFMGNF---CSHPCNLSFHSFS----SLRLQ-----FGKLGQMIAAH 355
+E + F+ GNF C N+ + ++ S+R Q F ++I+ +
Sbjct: 300 NGCIENTNANVGFILFGNFIEDCFFDSNVITNIYNAQSLSIRCQKTREGFENFYKVISKY 359
Query: 356 PRLKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPN-AIF-SSNPCRL 408
P+L + S F F+PGP D GP +LP+ + Y T +++ + + IF SSNP RL
Sbjct: 360 PQLLKRSFFFFLPGPSDIGPD-LLPKPPIIDYYTSNIREELNDLQIFMSSNPMRL 413
>gi|300123977|emb|CBK25248.2| unnamed protein product [Blastocystis hominis]
Length = 165
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 71/137 (51%), Gaps = 3/137 (2%)
Query: 262 GGGTLKKEDTLR--LADLEKRAANDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSL 319
G G K+ R + ++KR + +ILSD++LD +V +L+ + + PS
Sbjct: 2 GNGVEKENGNNRGNESSIDKRIESPSLLILSDVFLDRSDVFDRLKELFTKHADDSLPPS- 60
Query: 320 FVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVL 379
F+F G+F S ++ L F L ++IA+ PRL EH+ F+F+PG D G + +
Sbjct: 61 FLFCGDFVSSNFSVDSAGIRRLLRLFTSLAELIASFPRLVEHAHFIFVPGTRDVGANGLF 120
Query: 380 PRCALPKYLTEELQKYI 396
PR + + L + +++
Sbjct: 121 PREPVQRTLQIQCCRFL 137
>gi|84995438|ref|XP_952441.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302602|emb|CAI74709.1| hypothetical protein, conserved [Theileria annulata]
Length = 627
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 101/426 (23%), Positives = 177/426 (41%), Gaps = 61/426 (14%)
Query: 28 ILSFVN-RFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQAEAAAEGDSGS 86
ILS N + E E ID ++++ + ESVN LL E + G+
Sbjct: 89 ILSLYNTKLSSIETEQIDSIINEITTSELYIAQNKFIESVNNKFPYLL------ENNFGN 142
Query: 87 ASNHSAIRVIDAFL-VPKFRYDSIKKHFYQHAGSLPIHGEASAKA--ALYRDRFLLLFQR 143
N + + V ++F VPK Y + K+ F E + R+ LL +R
Sbjct: 143 KFNSNGVYVYNSFKDVPKVYYSTKKQKFLSSFSREDYEKETHGDPIDQICSIRYQLLLER 202
Query: 144 VSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASV 203
R +F+ +S + + ++ G + ++G +S+ + G ++ +
Sbjct: 203 C-RGYNFNEWIGIESHSYLMAVTVDSVS--FSSEGVQLLIGNLSKSKYGDLCIQGSLVEL 259
Query: 204 EIDLS-KAKITTGFFTENTIVVAEGEML-VDGIFQVITCGFPPLEDRDQSLKLLAGYDFF 261
+I ++ + KI+TG + +V+ G M+ ++ +F+V PPL +D ++ + F
Sbjct: 260 KIKIAPECKISTGIYCYGQVVIVYGVMISLENVFEVRGLTHPPLTPKDD----VSHLNLF 315
Query: 262 GGGTLKKEDTLRLADLE-----KRAANDMFVILSDIWLDNEEVMGKLEVVLDGF---ESV 313
GG D + +L K + FVI +D+ LD + + ++E++ + S
Sbjct: 316 GGHH-NPMDLVTFRELPNMLSIKNMYFNWFVI-TDLHLDKTDNINQIELLFNSLMDNYSK 373
Query: 314 EVVPSLFVFMGNFCSHPCNLSFH--------------SFSSLRLQFGKLGQ--------M 351
+P F+FMGNF S N ++ SF S F L + M
Sbjct: 374 HQLPVGFIFMGNFNSSEYNFDYYRNWTDTFELKSTTNSFESYSAGFEALFKVLTKPKFIM 433
Query: 352 IAAHPRLKEHSRFLFIPGPDDAG-PSTVLPRCALPKYLT----EELQKYIPNA----IFS 402
I A L +F+PGP DA +PR L + T E L+ P + I +
Sbjct: 434 ILASTSLPS-CYLVFVPGPKDATLCRQRVPRNPLLSFATNRFKERLESSRPESKGRVIMA 492
Query: 403 SNPCRL 408
+NPCR+
Sbjct: 493 TNPCRI 498
>gi|71746192|ref|XP_827653.1| DNA polymerase epsilon subunit B [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70831818|gb|EAN77323.1| DNA polymerase epsilon subunit B, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 535
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 91/423 (21%), Positives = 166/423 (39%), Gaps = 38/423 (8%)
Query: 7 KKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSIIDKE 64
+++ + + R + L + L + L+ +N DA+ A L D F H + +D E
Sbjct: 8 QQLARAHQFRLHPLALKGLSDYLATLNGNIDAQRNA---LRDIFALLHRACGLERFVDGE 64
Query: 65 SVNRVTSV-LLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ-HAGSLPI 122
V V S+ + + A +G + +D + Y I + + S
Sbjct: 65 KVKSVVSLHSSKVQGAIDG---------VVPTVDVLSLDDTPYAYIDEWSGEVRVQSTRQ 115
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSR-PSFDVVNSEFGSCEISTIQSLVGQTGRRW 181
HG+ + + R+L +R R FSR S ++ S S + +
Sbjct: 116 HGD---RFTVLNQRYLFARKRCLRSGLFSRDSSKQPIDQGLPSLVPSIALEGIDPSDTVA 172
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241
V+G++ + YLED+ V++ + V V G+F V +
Sbjct: 173 VLGMLVK-HSSATYLEDIYGRVKLIMRGCVHPPVGVVGEGFFVVVKGQWVGGLFVVASVD 231
Query: 242 FPPLEDRDQSLKLLAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
PP E R+ +L+++ +D FG + +D + EK + + +++S I LD +
Sbjct: 232 LPPAERREDTLRVVGSDFDLFGR---RPDDVVAAFRREKTSLGSVVIVMSQIHLDQRSTV 288
Query: 301 GKLEVVLDGFES---VEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFGKLG 349
L ++ E+ + V +G FCS P + F R L
Sbjct: 289 DSLISFFREMQNRSEAELTDTTLVMVGEFCSSPIHYDDVSHLPEPFEGCDRYRSLMNILA 348
Query: 350 QMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCR 407
+I H P + + ++ + +PG D G VLP+ + + LQ + + + NPCR
Sbjct: 349 TVITVHAPSVAQLTQVVIVPGCGDITGLLGVLPQPPIVSTFGKVLQARLKKVVLAPNPCR 408
Query: 408 LNF 410
L F
Sbjct: 409 LRF 411
>gi|429327376|gb|AFZ79136.1| hypothetical protein BEWA_019820 [Babesia equi]
Length = 615
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 132/312 (42%), Gaps = 50/312 (16%)
Query: 136 RFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFY 195
R+ LLF+R SR +++ + N + ++ + + ++G + +DG
Sbjct: 187 RYELLFER-SRGFNYNAWFNNAPNISIKLLPVDSVS--MSSKDTQLLIGNLGHTKDGELC 243
Query: 196 LEDLAASVEIDLSK-AKITTGFFTENTIVVAEGEMLV-DGIFQVITCGFPPLEDRDQSLK 253
L+ + I +S+ KI G + + +V+ G M V + IF V PP+ +++
Sbjct: 244 LQGTLIELSIVISENCKIANGIYCDGQVVIIYGTMKVYENIFHVDGILHPPITLKNE--- 300
Query: 254 LLAGYDFFGGGTLKKEDTLRLADLEK-------RAANDMFVILSDIWLDNEEVMGKLEVV 306
L+ DFFGG K D LA R N ++I+S+++LD + LE +
Sbjct: 301 -LSSLDFFGG----KLDNNTLAIYRDYTSFSSFRGINTNWIIISNLYLDKTNTIETLEHL 355
Query: 307 LDGFESV---EVVPSLFVFMGNFCSHPCNLSFH-----------SFSSLRLQFGKLG--- 349
D + + + +P F+FMG+F S N +H S +F G
Sbjct: 356 FDSYIEMYPQQGLPVGFIFMGDFNSLGFNFEYHHSWIDQNDKNTKHVSNTTEFYARGFET 415
Query: 350 -QMIAAHPR---LKEHSRFLFIPGPDDAG-PSTVLPRCALPKYLTEELQKYIPNA----- 399
+ P+ + +F+PGP+DA LPR L Y ++ + A
Sbjct: 416 LYKLLIKPKYLMILSACYLVFVPGPNDATLCRRKLPRQPLLNYCINRFKERVEAARPESK 475
Query: 400 ---IFSSNPCRL 408
+ ++NPCR+
Sbjct: 476 GRIVMATNPCRI 487
>gi|221061695|ref|XP_002262417.1| DNA polymerase alpha/epsilon subunit B [Plasmodium knowlesi strain
H]
gi|193811567|emb|CAQ42295.1| DNA polymerase alpha/epsilon subunit B [Plasmodium knowlesi strain
H]
Length = 624
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 122/258 (47%), Gaps = 18/258 (6%)
Query: 167 ISTIQSL-VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVV 224
I+++ ++ + TG + V+G++ DG ++ + +++ L++ I G + +++
Sbjct: 242 ITSVDAIKLTNTGHQHVIGILGLNRDGDMVIQGIRNEIKLFLNRECVINHGLYCIGHVIL 301
Query: 225 AEGEM-LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAAN 283
+G M L + F PP ++ + YDF K+ + + + K
Sbjct: 302 VQGRMRLSNKTFYAAEIMHPPRNFEEERNEEDMFYDFENEKEKKQVEEYEII-VSKNDKK 360
Query: 284 DMFVILSDIWLDNE---EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSS 340
++I+ D++LDN E++ K+ + +P F+FMG+ S + + ++F +
Sbjct: 361 KNWIIMHDVYLDNPYTFEILDKMFSLYVNTYPENNLPIGFIFMGDLISLKFDYN-NNFHN 419
Query: 341 LRLQ-FGKLGQMIAAHPRL-KEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIP 397
+ ++ F KL M+ + +L EH +FIPG +D +P+ + Y + Q+ I
Sbjct: 420 VYIKGFEKLSVMLISKFKLILEHCYLIFIPGKNDPCACKNSIPQMPILPYYVRKFQQNIE 479
Query: 398 N-------AIFSSNPCRL 408
+ IF++NPCR+
Sbjct: 480 SFFSSKKKIIFATNPCRI 497
>gi|156095689|ref|XP_001613879.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802753|gb|EDL44152.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 626
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 126/262 (48%), Gaps = 20/262 (7%)
Query: 167 ISTIQSL-VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVV 224
I+++ ++ + TG + V+G++ DG ++ + +++ L++ I G + +++
Sbjct: 244 ITSVDAIKLTNTGHQHVIGILGLNRDGDMVIQGIRNEIKLFLNRECVINHGLYCIGHVIL 303
Query: 225 AEGEM-LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAAN 283
+G M L + F PP ++ + YDF K+ + + + K
Sbjct: 304 VQGRMRLANKTFYAAEIMHPPRNFEEERNEEDMFYDFENEKEKKEVEEYEII-VRKNDKR 362
Query: 284 DMFVILSDIWLDNE---EVMGK-LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFS 339
++I+ D++LD+ EV+ K L + ++ + E+ P F+FMG+F S + + +F
Sbjct: 363 HNWIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENEL-PVGFIFMGDFISLKFDYN-RNFH 420
Query: 340 SLRLQ-FGKLGQMIAAHPRL-KEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYI 396
+ ++ F KL M+ + +L EH +FIPG +D +P+ + Y + ++ I
Sbjct: 421 KVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCACKNSIPKMPILPYYIRKFKQNI 480
Query: 397 P-------NAIFSSNPCRLNFL 411
N IF++NPCR+ L
Sbjct: 481 ESFFSSKRNIIFATNPCRIRHL 502
>gi|402085523|gb|EJT80421.1| DNA polymerase epsilon subunit B [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 903
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 83/162 (51%), Gaps = 25/162 (15%)
Query: 93 IRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHF-- 150
++++ A+ P+ Y+ KKHF + A I AS K AL+R+R+ ++ QR+ R++ F
Sbjct: 235 LKMVGAYDQPRMIYNVAKKHFERDASKPSILPPASHKTALFRNRYNVIHQRLMRNEAFQT 294
Query: 151 ------------SRPSFDVVNSEFGSCEISTIQSLVGQTG-RRWVMGVISQLEDGHFYLE 197
SR S V S S +I+ + +L+G+ G ++G++ + G L
Sbjct: 295 SAVADTKRGSKLSR-SASTVASPQQSYKITPVANLLGRHGTHHMLLGMLVIMPAGDLALS 353
Query: 198 DLAASVEIDLSKAKIT---TGFFTENTIVVAEGEMLVDGIFQ 236
DL+ ++ +DLS+A + +F IV L+DG+++
Sbjct: 354 DLSGTISLDLSQAATIPDDSAWFAPGMIV------LIDGVYE 389
>gi|124806489|ref|XP_001350737.1| DNA polymerase epsilon subunit B, putative [Plasmodium falciparum
3D7]
gi|23496864|gb|AAN36417.1| DNA polymerase epsilon subunit B, putative [Plasmodium falciparum
3D7]
Length = 624
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 127/260 (48%), Gaps = 22/260 (8%)
Query: 167 ISTIQSL-VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVV 224
I+++ S+ + TG + ++G++ DG ++ + V++ ++++ I G + I++
Sbjct: 242 ITSVDSIKLTNTGHQHIIGILGLNRDGELVIQGIRNEVKLFINQSCIINNGIYCIGHIIL 301
Query: 225 AEGEM-LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKK--EDTLRLADLEKRA 281
+G M L++ F V PP D+ + YDF K+ E + + + +K+
Sbjct: 302 LQGRMKLLNKTFYVTEIMHPPRNYDDEKNEEDIFYDFENENEKKEIGEYEIIVRNNDKKQ 361
Query: 282 ANDMFVILSDIWLDNEEVMGKLEVVLDGFESV---EVVPSLFVFMGNFCSHPCNLSFHSF 338
++I+ DI+LDN LE + + + +P F+ MG+F S + + +F
Sbjct: 362 N---WIIMHDIYLDNPSTFEILEKMFSLYVNTYPDNELPIGFILMGDFISLKFDYN-KNF 417
Query: 339 SSLRLQ-FGKLGQMIAAHPRLK-EHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKY 395
+ L ++ F KL ++ + +L ++ +FIPG +D +P+ + Y ++ ++
Sbjct: 418 NDLYIKGFEKLSVLLISKFKLILQNCYLIFIPGKNDPCACKNSIPKMPILPYYIKKFEQN 477
Query: 396 IPN-------AIFSSNPCRL 408
I + IF++NPCR+
Sbjct: 478 IQSFFSCKKKIIFATNPCRI 497
>gi|261331859|emb|CBH14853.1| DNA polymerase epsilon subunit b, putative [Trypanosoma brucei
gambiense DAL972]
Length = 535
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 90/423 (21%), Positives = 166/423 (39%), Gaps = 38/423 (8%)
Query: 7 KKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFE--HESSLKSSIIDKE 64
+++ + + R + L + L + L+ +N DA+ A L D F H + +D E
Sbjct: 8 QQLARAHQFRLHPLALKGLSDYLATLNGNIDAQRNA---LRDIFALLHRACGLERFVDGE 64
Query: 65 SVNRVTSV-LLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFYQ-HAGSLPI 122
V V S+ + + A +G + +D + Y I + + S
Sbjct: 65 KVKSVVSLHSSKVQGAIDG---------VVPTVDVLSLDDTPYAYIDEWSGEVRVQSTRQ 115
Query: 123 HGEASAKAALYRDRFLLLFQRVSRDQHFSR-PSFDVVNSEFGSCEISTIQSLVGQTGRRW 181
HG+ + + R+L +R R FSR S ++ S S + +
Sbjct: 116 HGD---RFTVLNQRYLFARKRCLRSGLFSRDSSKQPIDQGLPSLVPSIALEGIDPSDTVA 172
Query: 182 VMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241
V+G++ + YLED+ V++ + V V G+F V +
Sbjct: 173 VLGMLVK-HSSATYLEDIYGRVKLIMRGCVHPPVGVVGEGFFVVVKGQWVGGLFVVASVD 231
Query: 242 FPPLEDRDQSLKLLAG-YDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEVM 300
PP E R+ +L+++ +D FG + +D + EK + + +++S I LD +
Sbjct: 232 LPPAERREDTLRVVGSDFDLFGR---RPDDVVAAFRREKTSLGSVVIVMSQIHLDQRSTV 288
Query: 301 GKLEVVLDGFES---VEVVPSLFVFMGNFCSHPCNLS--------FHSFSSLRLQFGKLG 349
L ++ E+ + V +G FCS P + F R L
Sbjct: 289 DSLISFFREMQNRSEAELTDTTLVMVGEFCSSPIHYDDVSHLPEPFEGCDRYRSLMNILA 348
Query: 350 QMIAAH-PRLKEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCR 407
+I + P + + ++ + +PG D G VLP+ + + LQ + + + NPCR
Sbjct: 349 TVITVNAPSVAQLTQVVIVPGCGDITGLLGVLPQPPIVSTFGKVLQARLKKVVLAPNPCR 408
Query: 408 LNF 410
L F
Sbjct: 409 LRF 411
>gi|70954282|ref|XP_746195.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56526730|emb|CAH89159.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 622
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 80/350 (22%), Positives = 159/350 (45%), Gaps = 45/350 (12%)
Query: 92 AIRVIDAFL-VPKFRYDSIKKHFYQHA--GSLPIHGE---ASAKAALYRDRFLLLFQRVS 145
I+V + FL + F YD + F + GS+ + E A+A Y ++ +L ++
Sbjct: 158 GIKVYNTFLDLSHFYYDEKRMRFLKKKKEGSIENYNEYINANADVEFYDLKYHILSKKTK 217
Query: 146 RDQHFSRPSF----DVVNSEFGSCEISTIQSL----VGQTGRRWVMGVISQLEDGHFYLE 197
PS D +N E + + I S+ + T + ++G++ DG ++
Sbjct: 218 -----GHPSILFWSDAIN-EIHIKDKTIITSVDAVKLTNTDHQHIIGILGLNRDGDLVIQ 271
Query: 198 DLAASVEIDLSKA-KITTGFFTENTIVVAEGEM-LVDGIFQVITCGFPPLEDRDQSLKLL 255
+ V++ ++K+ I G + +++ +G + L + F PP D+ +
Sbjct: 272 GIRNEVKLVINKSCVINHGIYCIGHVILVQGRIKLTNKTFYATEIMHPPRNYHDEKNEGD 331
Query: 256 AGYDFFGGGTLKKEDTLRLADLEKRAAND----MFVILSDIWLDNEEVMGKLEVVLDGFE 311
Y+F ++D + + + E N+ ++I+ DI+LDN LE + +
Sbjct: 332 LFYNFEN-----EKDKIGMTEYELVVKNNDKSQNWIIMHDIYLDNPYTFEILEKMFSLYV 386
Query: 312 SV---EVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ-FGKLGQMIAAHPRLKEHSRFL-F 366
+ +P F+ MG+F S + + +F++L ++ F KL ++ + +L + +L F
Sbjct: 387 TTYPDNELPVGFILMGDFISLKFDYN-KNFNNLYIKGFEKLSYLLISKFKLILQNCYLVF 445
Query: 367 IPGPDD-AGPSTVLPRCA-LPKYLT---EELQKYIP---NAIFSSNPCRL 408
IPG +D LP+ LP Y+ E ++ + P IF++NPCR+
Sbjct: 446 IPGKNDPCACKNSLPKLPILPYYIKKFKENIESFCPCEDRIIFATNPCRI 495
>gi|82705036|ref|XP_726801.1| DNA polymerase epsilon subunit b [Plasmodium yoelii yoelii 17XNL]
gi|23482363|gb|EAA18366.1| DNA polymerase epsilon subunit b [Plasmodium yoelii yoelii]
Length = 623
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 81/351 (23%), Positives = 160/351 (45%), Gaps = 47/351 (13%)
Query: 92 AIRVIDAFL-VPKFRYDSIKKHFYQHAGSLPIHG-----EASAKAALYRDRFLLLFQRVS 145
I++ + FL + F YD + F + I A+A Y ++ +L ++
Sbjct: 159 GIKIYNTFLDLSHFYYDEKRMQFLKKKKKESIENYNEYINANADVEFYDLKYHILSKKTK 218
Query: 146 RDQHFSRPSF----DVVNSEFGSCEISTIQSL----VGQTGRRWVMGVISQLEDGHFYLE 197
PS D +N E + + I S+ + T + ++G++ DG ++
Sbjct: 219 -----GHPSILFWSDAIN-EIHIKDKTIITSVDAVKLTNTDHQHIIGILGLNRDGDLVIQ 272
Query: 198 DLAASVEIDLSKA-KITTGFFTENTIVVAEGEM-LVDGIFQVITCGFPPLEDRDQSLKLL 255
+ V++ ++K+ I G + +++ +G + L + F PP D+ +
Sbjct: 273 GIRNEVKLVINKSCVINHGIYCIGHVILVQGRIKLANKTFYATEIMHPPRNYHDEKNE-- 330
Query: 256 AGYDFFGGGTLKKEDTLRLADLEKRAAND----MFVILSDIWLDNE---EVMGKL-EVVL 307
G F+ T K D + + + E N+ ++I+ DI+LDN E++ K+ + +
Sbjct: 331 -GDLFYSFETEK--DKIGMTEYELIVKNNDKSQNWIIMHDIYLDNPYTFEILEKMFSLYV 387
Query: 308 DGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQ-FGKLGQMIAAHPRLKEHSRFL- 365
+ + E+ P F+ MG+F S + + H F++L ++ F KL ++ + +L + +L
Sbjct: 388 NTYPDNEL-PVGFILMGDFISLKFDYNKH-FNNLYIKGFEKLSYLLISKFKLILQNCYLV 445
Query: 366 FIPGPDD-AGPSTVLPRCA-LPKYLT---EELQKYIP---NAIFSSNPCRL 408
FIPG +D LP+ LP Y+ E ++ + P IF++NPCR+
Sbjct: 446 FIPGKNDPCACKNSLPKLPILPYYIKKFKENIESFCPCEDRIIFATNPCRI 496
>gi|393241100|gb|EJD48624.1| hypothetical protein AURDEDRAFT_150992 [Auricularia delicata
TFB-10046 SS5]
Length = 3478
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 317 PSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPS 376
P +F+F GNF S S + F L +I+++P ++ + F+F+PGP D S
Sbjct: 15 PKVFIFCGNFTSKAIQGSGKDLQRYQDGFDDLADIISSYPDFRD-THFVFVPGPLDLCGS 73
Query: 377 TVLPRCALPKYLTEELQKYIPNAIFSSNPCRLN 409
TV PR + ++ +P A F SNPCR+
Sbjct: 74 TVFPRPPILPSCVSRIKVKVPKAHFMSNPCRIK 106
>gi|399216985|emb|CCF73672.1| unnamed protein product [Babesia microti strain RI]
Length = 451
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 141/312 (45%), Gaps = 35/312 (11%)
Query: 119 SLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTG 178
S P++ + + + A R + ++L+ RVS + + +V++ IST G
Sbjct: 27 SAPLYFDKNKRRA-KRHKSVVLWTRVSDNDSNDKLVIQIVDA----ISIST-------KG 74
Query: 179 RRWVMGVISQLEDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVI 238
+ ++G +S G F ++ + +++ KI G + + +V+ G + + + +
Sbjct: 75 TQHLIGNLSINRQGDFCIQGAQLELVLNIKGCKIHKGIYCDGHVVLVSGTIQLPERYFIA 134
Query: 239 TCGFPPLEDRDQSLKLLAGYDFFGGGT-LKKEDTLRLAD----LEKRAANDMFVILSDIW 293
T P D +G D FGG +K DT + ++ + ++ILS++
Sbjct: 135 TEIMHPPFDVGDDFDYFSG-DVFGGNLDSRKIDTFSVYRESLLTSRKEVSSYWIILSNVN 193
Query: 294 LDNEEVMGKLEVVLDGF---ESVEVVPSLFVFMGNFCSHPCN-------LSFHSFSSLRL 343
L + + LE + + + +P F+FMGNF S + L +F +
Sbjct: 194 LTDIASLSALESLFQKLVNSTTAQPLPVGFIFMGNFSSRSFSFSKKRFILDDQTFIDYKK 253
Query: 344 QFGKLGQMIAAHPRLKEHSRFLFIPGPDDAG-PSTVLPRCALPKYLTEELQ----KYIPN 398
F +I + L E+ ++FIPGP DA + +PR + + TE+++ + +P+
Sbjct: 254 GFEDFSLVIVKYKILLENCYWIFIPGPGDACICNQTIPRMPILEQFTEKMRENLLQSVPS 313
Query: 399 A--IFSSNPCRL 408
A F+++PCR+
Sbjct: 314 AKIYFTTSPCRI 325
>gi|66358548|ref|XP_626452.1| DNA polymerase epsilon subunit [Cryptosporidium parvum Iowa II]
gi|46227988|gb|EAK88908.1| DNA polymerase epsilon subunit [Cryptosporidium parvum Iowa II]
Length = 530
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/325 (24%), Positives = 124/325 (38%), Gaps = 79/325 (24%)
Query: 156 DVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLEDGHFYLEDLAASVEI-DLSKAKITT 214
D+ S+F + + SL Q +G++ +G +ED V+I SK
Sbjct: 78 DIEKSKFVVYPLKHVISLSEQVT---TLGMLISNGEGQILIEDPTHRVKIVTSSKTLFGK 134
Query: 215 GFFTENTIVVAEGEM-LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGG---GTLKKED 270
G + N V+A G+M + F V PP+++ D+++ + F G LK ED
Sbjct: 135 GIYCFNHFVIARGKMNKITQSFHVDLMFHPPIQNIDKNVANEILSNLFSGINYTLLKSED 194
Query: 271 ------------------TLRLADLEKR---AANDMFVILSDIWLDNEEVMGKLEVVLDG 309
T L DL+ + + ND +VI SDI L + V+ L V G
Sbjct: 195 REKNIKNQSLNKTKFFRTTKYLEDLKIKVQVSKNDYWVIFSDIMLTSMRVIENLRKVFSG 254
Query: 310 FESVEVVPSL---FVFMGNFCS-------------HPCNLSFHSFSSL------------ 341
+E + ++ F+ +GNF + C + H+FS++
Sbjct: 255 YEKMIKDSNINIGFILLGNFINIDFDKNGEDWMEDKTCVENDHNFSNVNEKGRSKSLSIF 314
Query: 342 -------------------RLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTVLPRC 382
R F ++ P L + F I GP+D GP +LP+
Sbjct: 315 NSNSRENHFKNSQNNFNTTRKGFEGFKNVLKEFPVLLSNCNFFIISGPNDIGPD-LLPKP 373
Query: 383 ALPKYLTEELQKYIPNAI--FSSNP 405
L Y L K P++ F SNP
Sbjct: 374 PLSNYYASYLSKVFPDSKIHFLSNP 398
>gi|68070477|ref|XP_677150.1| DNA polymerase epsilon subunit b [Plasmodium berghei strain ANKA]
gi|56497151|emb|CAH98170.1| DNA polymerase epsilon subunit b, putative [Plasmodium berghei]
Length = 566
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/259 (22%), Positives = 118/259 (45%), Gaps = 36/259 (13%)
Query: 174 VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSKA-KITTGFFTENTIVVAEGEM-LV 231
+ T + ++G++ DG ++ + V++ ++K+ I G + +++ +G + L
Sbjct: 249 LTNTDHQHIIGILGLNRDGDLVIQGIRNEVKLVINKSCVINHGIYCIGHVILVQGRIKLA 308
Query: 232 DGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTL-----KKEDTLRLADLEKRAAND-- 284
+ F PP YD G L ++D + + + E N+
Sbjct: 309 NKTFYATEIMHPP-----------RNYDEKNEGDLFYSFENEKDQIGMTEYELIVKNNDK 357
Query: 285 --MFVILSDIWLDNEEVMGKLEVVLDGFESV---EVVPSLFVFMGNFCSHPCNLSFHSFS 339
++I+ DI+LDN LE + + + +P F+ MG+F S + + +F+
Sbjct: 358 SQNWIIMHDIYLDNPYTFEILEKMFSLYVTTYPDNELPVGFILMGDFISLKFDYN-KNFN 416
Query: 340 SLRLQ-FGKLGQMIAAHPRLKEHSRFL-FIPGPDD-AGPSTVLPRCA-LPKYLT---EEL 392
+L ++ F KL ++ + +L + +L FIPG +D LP+ LP Y+ E +
Sbjct: 417 NLYIKGFEKLSYLLISKFKLILQNCYLVFIPGKNDPCACKNSLPKLPILPYYIKKFKENI 476
Query: 393 QKYIP---NAIFSSNPCRL 408
+ + P IF++NPCR+
Sbjct: 477 ESFCPCEDRIIFATNPCRI 495
>gi|67595187|ref|XP_665982.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656871|gb|EAL35752.1| hypothetical protein Chro.20265 [Cryptosporidium hominis]
Length = 427
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 114/290 (39%), Gaps = 76/290 (26%)
Query: 191 DGHFYLEDLAASVEIDLS-KAKITTGFFTENTIVVAEGEM-LVDGIFQVITCGFPPLEDR 248
+G +ED V+I +S K G + N V+A G+M + F V PP+++
Sbjct: 7 EGQISIEDPTHRVKIVISSKTLFGKGIYCFNHFVIARGKMNKITQSFHVDLMFHPPIQNI 66
Query: 249 DQSL--KLLAG-YDFFGGGTLKKED------------------TLRLADLEKR---AAND 284
D+++ ++L+ + LK ED T L DL+ + + ND
Sbjct: 67 DKNVANEILSNLFSSINYTLLKSEDREKNIKNQSLNKTKFFRTTKYLEDLKIKVQVSRND 126
Query: 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSL---FVFMGNFCS------------- 328
+VI SDI L + V+ L V G+E + ++ F+ +GNF +
Sbjct: 127 YWVIFSDIVLTSMRVIENLRKVFSGYEKMIKDSNINIGFILLGNFINIDFDKNGENWTEE 186
Query: 329 HPCNLSFHSFSSL-------------------------------RLQFGKLGQMIAAHPR 357
C + H+FS++ R F + ++ P
Sbjct: 187 KICVENEHNFSNVNERGRSTSLFTFNSNSRENHFKNSQNNFNITRKGFERFKNVLKEFPV 246
Query: 358 LKEHSRFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAI--FSSNP 405
L + F I GP+D GP +LP+ L Y L K P++ F SNP
Sbjct: 247 LLSNCNFFIISGPNDIGPD-LLPKPPLSNYYASYLSKVFPDSKIHFLSNP 295
>gi|170587262|ref|XP_001898397.1| pole2 protein [Brugia malayi]
gi|158594223|gb|EDP32809.1| pole2 protein, putative [Brugia malayi]
Length = 198
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 363 RFLFIPGPDDAGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
F+F+PGPDD +++LPR LP L EL + +PN F+SNPCR+ +
Sbjct: 26 HFIFVPGPDDPSLNSILPRPPLPFQLF-ELMRDVPNCSFASNPCRIQY 72
>gi|387212823|gb|AFJ69150.1| polymerase epsilon 2 (p59 subunit), partial [Nannochloropsis
gaditana CCMP526]
Length = 96
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 4/88 (4%)
Query: 89 NHSAIRVIDAFLVPKFRYDSIKKHF-YQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRD 147
N AI + DAF +PK YD K F + P + + A+A ++R+R+ L+ QRV R
Sbjct: 11 NQEAIAIWDAFSMPKMTYDHRSKSFSFTFDKERPFNPDPGARAHMFRERYALVRQRVLRH 70
Query: 148 QHFSRPSFDVVNSEFGSCEISTIQSLVG 175
+ F RP ++ + ++ T+ SL+G
Sbjct: 71 ELFVRP---IMGHDRNYLKLVTVDSLLG 95
>gi|389586442|dbj|GAB69171.1| DNA polymerase alpha/epsilon subunit B, partial [Plasmodium
cynomolgi strain B]
Length = 470
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 108/231 (46%), Gaps = 12/231 (5%)
Query: 167 ISTIQSL-VGQTGRRWVMGVISQLEDGHFYLEDLAASVEIDLSK-AKITTGFFTENTIVV 224
I+++ ++ + TG + V+G++ DG ++ + +++ L++ I G + +++
Sbjct: 242 ITSVDAIKLTNTGHQHVIGILGLNRDGDMVIQGIRNEIKLFLNRECVINHGLYCIGHVIL 301
Query: 225 AEGEM-LVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAAN 283
+G M L + F PP ++ + YD F KKE + K
Sbjct: 302 VQGRMRLANKTFYAAEIMHPPRNFEEERNEEDMFYD-FENEKEKKEIEEYEIIVRKNDRK 360
Query: 284 DMFVILSDIWLDNE---EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSS 340
++I+ D++LDN EV+ K+ + +P F+FMG+F S + + +F +
Sbjct: 361 KNWIIMHDVYLDNPHTFEVLDKMFTLYVNTYPENELPVGFIFMGDFISLKFDYN-KNFHN 419
Query: 341 LRLQ-FGKLGQMIAAHPRLK-EHSRFLFIPGPDD--AGPSTVLPRCALPKY 387
+ ++ F KL M+ + +L E +FIPG +D A ++V LP Y
Sbjct: 420 VYIKGFEKLSVMLISKFKLVLEQCYLIFIPGMNDPCACKNSVPQMPILPYY 470
>gi|221501938|gb|EEE27689.1| DNA polymerase epsilon subunit B, putative [Toxoplasma gondii VEG]
Length = 864
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 286 FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC---NLSFHSFSSLR 342
+VI+++ + E + L +L FES + PS FVF+G+F S ++ F++L
Sbjct: 596 WVIVTECHFNEREDVELLGEMLATFESQDEYPSGFVFLGSFSSTISGGEDVYSAGFNAL- 654
Query: 343 LQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV---LPRCALPKYLTEELQKYIPNA 399
+ + P F+F+PGPDD PS LPR L T + Q+ I A
Sbjct: 655 -----FDLLTSRFPLFVSRCHFVFVPGPDD--PSFARESLPRLPLTPPFTSDFQQRIEKA 707
Query: 400 I--------FSSNPCRLNFLIT 413
+ F+++PCRL +
Sbjct: 708 VPASKGKIFFTTSPCRLRHFTS 729
>gi|237844331|ref|XP_002371463.1| DNA polymerase epsilon subunit, putative [Toxoplasma gondii ME49]
gi|211969127|gb|EEB04323.1| DNA polymerase epsilon subunit, putative [Toxoplasma gondii ME49]
gi|221481260|gb|EEE19657.1| DNA polymerase epsilon subunit B, putative [Toxoplasma gondii GT1]
Length = 864
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 22/142 (15%)
Query: 286 FVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPC---NLSFHSFSSLR 342
++I+++ + E + L +L FES + PS FVF+G+F S ++ F++L
Sbjct: 596 WIIVTECHFNEREDIELLGEMLATFESQDEYPSGFVFLGSFSSTISGGEDVYSAGFNAL- 654
Query: 343 LQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGPSTV---LPRCALPKYLTEELQKYIPNA 399
+ + P F+F+PGPDD PS LPR L T + Q+ I A
Sbjct: 655 -----FDLLTSRFPLFVSRCHFVFVPGPDD--PSFARESLPRLPLTPPFTSDFQQRIEKA 707
Query: 400 I--------FSSNPCRLNFLIT 413
+ F+++PCRL +
Sbjct: 708 VPASKGKIFFTTSPCRLRHFTS 729
>gi|156091481|ref|XP_001612369.1| DNA polymerase epsilon subunit B [Plasmodium vivax Sal-1]
gi|148801171|gb|EDL42576.1| DNA polymerase epsilon subunit B, putative [Plasmodium vivax]
Length = 307
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 22/143 (15%)
Query: 286 FVILSDIWLDNE---EVMGK-LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF---HSF 338
++I+ D++LD+ EV+ K L + ++ + E+ P F+FMG+F S L F +F
Sbjct: 30 WIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENEL-PVGFIFMGDFIS----LKFDYNRNF 84
Query: 339 SSLRLQ-FGKLGQMIAAHPRLK-EHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKY 395
+ ++ F KL M+ + +L EH +FIPG +D +P+ + Y + ++
Sbjct: 85 HKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCACKNSIPKMPILPYYIRKFKQN 144
Query: 396 IP-------NAIFSSNPCRLNFL 411
I N IF++NPCR+ L
Sbjct: 145 IESFFSSKRNIIFATNPCRIRHL 167
>gi|156091209|ref|XP_001612355.1| DNA polymerase epsilon subunit B [Plasmodium vivax Sal-1]
gi|148801157|gb|EDL42562.1| DNA polymerase epsilon subunit B [Plasmodium vivax]
Length = 306
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 22/143 (15%)
Query: 286 FVILSDIWLDNE---EVMGK-LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF---HSF 338
++I+ D++LD+ EV+ K L + ++ + E+ P F+FMG+F S L F +F
Sbjct: 29 WIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENEL-PVGFIFMGDFIS----LKFDYNRNF 83
Query: 339 SSLRLQ-FGKLGQMIAAHPRL-KEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKY 395
+ ++ F KL M+ + +L EH +FIPG +D +P+ + Y + ++
Sbjct: 84 HKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCACKNSIPKMPILPYYIRKFKQN 143
Query: 396 IP-------NAIFSSNPCRLNFL 411
I N IF++NPCR+ L
Sbjct: 144 IESFFSSKRNIIFATNPCRIRHL 166
>gi|323445863|gb|EGB02267.1| hypothetical protein AURANDRAFT_72873 [Aureococcus anophagefferens]
Length = 119
Score = 48.1 bits (113), Expect = 0.009, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 49/97 (50%), Gaps = 18/97 (18%)
Query: 179 RRWVMGVISQLEDGHFYLEDLAAS-----VEIDLSKAKITTGFFTENTIVVAEGEM---- 229
RR ++G ++ +E YLED + V++D+S+A+ G+F +++AEG M
Sbjct: 2 RRCILGTLTNIEGELLYLEDAHSETTRVVVKLDISQAETFGGYFAVGMVILAEGAMDANK 61
Query: 230 ---LVDGIFQVITC------GFPPLEDRDQSLKLLAG 257
+VD F I G PP E RD +L+ + G
Sbjct: 62 AMFVVDANFGSIAILRNQALGHPPAEPRDLALRTVGG 98
>gi|156091695|ref|XP_001612379.1| DNA polymerase epsilon subunit B [Plasmodium vivax Sal-1]
gi|148801181|gb|EDL42586.1| DNA polymerase epsilon subunit B, putative [Plasmodium vivax]
Length = 338
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 22/143 (15%)
Query: 286 FVILSDIWLDNE---EVMGK-LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF---HSF 338
++I+ D++LD+ EV+ K L + ++ + E+ P F+FMG+F S L F +F
Sbjct: 30 WIIMHDVYLDSPYTFEVLDKMLSLYVNTYPENEL-PVGFIFMGDFIS----LKFDYNRNF 84
Query: 339 SSLRLQ-FGKLGQMIAAHPRL-KEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKY 395
+ ++ F KL M+ + +L EH +FIPG +D +P+ + Y + ++
Sbjct: 85 HKVYIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCACKNSIPKMPILPYYIRKFKQN 144
Query: 396 IP-------NAIFSSNPCRLNFL 411
I N IF++NPCR+ L
Sbjct: 145 IESFFSSKRNIIFATNPCRIRHL 167
>gi|328726049|ref|XP_003248726.1| PREDICTED: DNA polymerase epsilon subunit 2-like, partial
[Acyrthosiphon pisum]
Length = 195
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 18/135 (13%)
Query: 88 SNHSAIRVIDAFLVPKFRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSR- 146
++ + V A+ +P++RY K F + + + G+A +K A Y DR+ ++ QR++R
Sbjct: 60 NDEDILHVTPAYKLPRYRYCPTTKKFQRIKSEISMFGDAQSKIAQYVDRYTVIRQRMARI 119
Query: 147 ----DQHFSRP--------SFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQL-EDGH 193
D ++P D + S G+C S ++ ++GV+ QL E G
Sbjct: 120 KTTSDGTLNQPLTIGDKIRDVDYLLSS-GACRKFDHSS---KSNSILLLGVLVQLKEGGR 175
Query: 194 FYLEDLAASVEIDLS 208
YLED ++ +D++
Sbjct: 176 HYLEDPTGAIPLDIT 190
>gi|156091201|ref|XP_001612353.1| DNA polymerase epsilon subunit B, truncated [Plasmodium vivax
Sal-1]
gi|148801155|gb|EDL42560.1| DNA polymerase epsilon subunit B, truncated, putative [Plasmodium
vivax]
Length = 275
Score = 45.1 bits (105), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 71/140 (50%), Gaps = 22/140 (15%)
Query: 289 LSDIWLDNE---EVMGK-LEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSF---HSFSSL 341
+ D++LD+ EV+ K L + ++ + E+ P F+FMG+F S L F +F +
Sbjct: 1 MHDVYLDSPYTFEVLDKMLSLYVNTYPENEL-PVGFIFMGDFIS----LKFDYNRNFHKV 55
Query: 342 RLQ-FGKLGQMIAAHPRL-KEHSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIP- 397
++ F KL M+ + +L EH +FIPG +D +P+ + Y + ++ I
Sbjct: 56 YIKGFEKLSVMLISKFKLILEHCYLIFIPGINDPCACKNSIPKMPILPYYIRKFKQNIES 115
Query: 398 ------NAIFSSNPCRLNFL 411
N IF++NPCR+ L
Sbjct: 116 FFSSKRNIIFATNPCRIRHL 135
>gi|449503129|ref|XP_004161848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 6 RKKIQKKMKIRGYG--LRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI-ID 62
+ ++K++ RG L +A+DEI+SF + FP ED+A+DLLLD +E + ++ ID
Sbjct: 10 KNNTERKIERRGMNRLLEEEAVDEIISFASDFPSHEDDAVDLLLDFITNEHTSNGALAID 69
Query: 63 KESVNRVTSVLLQAEAAAE 81
V+ + L A+A +
Sbjct: 70 MNLVHWAINHLRAADAVVD 88
>gi|449439723|ref|XP_004137635.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g13600-like [Cucumis sativus]
Length = 769
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 6 RKKIQKKMKIRGYG--LRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI-ID 62
+ ++K++ RG L +A+DEI+SF + FP ED+A+DLLLD +E + ++ ID
Sbjct: 10 KNNTERKIERRGMNRLLEEEAVDEIISFASDFPSHEDDAVDLLLDFITNEHTSNGALAID 69
Query: 63 KESVNRVTSVLLQAEAAAE 81
V+ + L A+A +
Sbjct: 70 MNLVHWAINHLRAADAVVD 88
>gi|312082850|ref|XP_003143615.1| hypothetical protein LOAG_08035 [Loa loa]
Length = 161
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+++K ++R + +A++ A+++L+ + E E ++
Sbjct: 11 RKQVRKAFQMRALTVSKEAMEY--------------AVEILI-KLEGEERIRW------- 48
Query: 66 VNRVTSVLLQAEAAA---------EGDSGSASNHSA-----IRVIDAFLVPKFRYDSIKK 111
+N+V S+L + +A+ + SNHS+ I VID F VP+ RYD +K
Sbjct: 49 INKVISMLSKQKASGPVLSFNEFRSAVTECVSNHSSKQESLIHVIDLFTVPRLRYDEQRK 108
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
G + G+++ LYR+R L+ Q
Sbjct: 109 VLVVVDGQASVVGQSADARNLYRERLKLVVQ 139
>gi|397621190|gb|EJK66163.1| hypothetical protein THAOC_12929 [Thalassiosira oceanica]
Length = 129
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSI 60
M RK+I + K RG ++ ALD +L+ ++R + DE + ++D+ +K +
Sbjct: 1 MMATDRKRIARTFKSRGLTIQSTALDALLNVLSR--ETHDETLFAIIDE------IKDRL 52
Query: 61 IDK--ESVNRVTSVLLQAEAAAEGDSGSASNHSAIRVIDAFLVPKFRYDSIKKHFY---Q 115
I N VT+ LL+ A A++++DAF P+ +D+ +K F
Sbjct: 53 ITGGGPGGNVVTTSLLEEVVAELSRDAKDVTDEAVQLLDAFQTPRLEFDATRKQFSLLDN 112
Query: 116 HAGSLPIHGEASAKAAL 132
+ ++G+A+ K L
Sbjct: 113 ASEKRSLYGKATDKVGL 129
>gi|393912267|gb|EFO20452.2| hypothetical protein LOAG_08035 [Loa loa]
Length = 177
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 69/151 (45%), Gaps = 36/151 (23%)
Query: 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKES 65
RK+++K ++R + +A++ A+++L+ + E E ++
Sbjct: 11 RKQVRKAFQMRALTVSKEAMEY--------------AVEILI-KLEGEERIRW------- 48
Query: 66 VNRVTSVLLQAEAAA---------EGDSGSASNHSA-----IRVIDAFLVPKFRYDSIKK 111
+N+V S+L + +A+ + SNHS+ I VID F VP+ RYD +K
Sbjct: 49 INKVISMLSKQKASGPVLSFNEFRSAVTECVSNHSSKQESLIHVIDLFTVPRLRYDEQRK 108
Query: 112 HFYQHAGSLPIHGEASAKAALYRDRFLLLFQ 142
G + G+++ LYR+R L+ Q
Sbjct: 109 VLVVVDGQASVVGQSADARNLYRERLKLVVQ 139
>gi|294898146|ref|XP_002776164.1| dna polymerase epsilon subunit b, putative [Perkinsus marinus ATCC
50983]
gi|239882882|gb|EER07980.1| dna polymerase epsilon subunit b, putative [Perkinsus marinus ATCC
50983]
Length = 164
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 361 HSRFLFIPGPDD-AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNF 410
+S+ +F+PGPDD AG +LP AL YLTE + K SNP R+
Sbjct: 3 NSQLVFVPGPDDPAGIGGLLPIPALGDYLTERIAKKFKGVHMCSNPVRIRM 53
>gi|311067763|ref|YP_003972686.1| hypothetical protein BATR1942_04005 [Bacillus atrophaeus 1942]
gi|419822249|ref|ZP_14345831.1| hypothetical protein UY9_12599 [Bacillus atrophaeus C89]
gi|310868280|gb|ADP31755.1| hypothetical protein BATR1942_04005 [Bacillus atrophaeus 1942]
gi|388473796|gb|EIM10537.1| hypothetical protein UY9_12599 [Bacillus atrophaeus C89]
Length = 1391
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 11/71 (15%)
Query: 9 IQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDK--ESV 66
+QK +K GY +++ +DEI VNR I LL FE ++K ++D+ ++V
Sbjct: 140 LQKNLK-NGYSVKLKVIDEITKTVNR--------ITALLSHFEKTYTVKLKVVDEITKTV 190
Query: 67 NRVTSVLLQAE 77
NR+T++L E
Sbjct: 191 NRITALLRDFE 201
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.138 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,322,841,260
Number of Sequences: 23463169
Number of extensions: 260450949
Number of successful extensions: 603502
Number of sequences better than 100.0: 414
Number of HSP's better than 100.0 without gapping: 292
Number of HSP's successfully gapped in prelim test: 122
Number of HSP's that attempted gapping in prelim test: 602075
Number of HSP's gapped (non-prelim): 467
length of query: 418
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 273
effective length of database: 8,957,035,862
effective search space: 2445270790326
effective search space used: 2445270790326
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 78 (34.7 bits)