Query 014802
Match_columns 418
No_of_seqs 163 out of 353
Neff 6.9
Searched_HMMs 29240
Date Mon Mar 25 18:05:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014802.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014802hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e0j_A DNA polymerase subunit 100.0 4E-30 1.4E-34 264.4 21.4 259 104-413 37-346 (476)
2 3flo_A DNA polymerase alpha su 99.9 3.1E-21 1.1E-25 197.6 22.3 247 125-413 8-284 (460)
3 2v6z_M DNA polymerase epsilon 99.5 9.4E-14 3.2E-18 112.9 9.4 72 1-73 25-98 (99)
4 3d03_A Phosphohydrolase; glyce 97.7 8.8E-05 3E-09 69.5 7.8 75 285-374 2-84 (274)
5 3ib7_A ICC protein; metallopho 97.5 9.6E-05 3.3E-09 71.3 6.4 79 284-373 26-112 (330)
6 1uf3_A Hypothetical protein TT 97.5 0.00015 5.1E-09 65.8 7.2 71 284-374 6-76 (228)
7 4fbk_A DNA repair and telomere 97.4 0.00016 5.4E-09 74.5 5.6 86 284-375 77-197 (472)
8 4fbw_A DNA repair protein RAD3 97.3 0.00017 5.7E-09 73.4 5.2 86 284-375 14-134 (417)
9 1ii7_A MRE11 nuclease; RAD50, 97.3 0.00036 1.2E-08 68.3 7.3 79 285-375 2-89 (333)
10 2q8u_A Exonuclease, putative; 97.2 0.00047 1.6E-08 67.5 7.4 77 285-374 20-109 (336)
11 3av0_A DNA double-strand break 97.2 0.00049 1.7E-08 68.9 7.5 81 283-375 20-109 (386)
12 3t1i_A Double-strand break rep 97.2 0.00032 1.1E-08 71.6 5.9 89 284-375 33-153 (431)
13 3tho_B Exonuclease, putative; 97.2 0.00043 1.5E-08 69.3 6.5 76 285-373 2-90 (379)
14 2yvt_A Hypothetical protein AQ 97.2 0.00095 3.3E-08 62.1 8.3 40 284-329 6-45 (260)
15 2nxf_A Putative dimetal phosph 97.1 0.00024 8.3E-09 67.6 3.4 80 283-373 5-99 (322)
16 1xm7_A Hypothetical protein AQ 97.0 0.0012 4E-08 59.4 7.3 73 285-374 3-84 (195)
17 2xmo_A LMO2642 protein; phosph 96.8 0.0022 7.4E-08 64.9 8.1 78 284-375 40-139 (443)
18 1su1_A Hypothetical protein YF 96.5 0.0023 7.8E-08 58.5 5.2 74 285-374 27-101 (208)
19 2a22_A Vacuolar protein sortin 96.3 0.0034 1.2E-07 57.6 4.9 64 285-375 27-92 (215)
20 1s3l_A Hypothetical protein MJ 96.3 0.0061 2.1E-07 54.9 6.3 64 284-375 26-89 (190)
21 1z2w_A Vacuolar protein sortin 96.2 0.0038 1.3E-07 56.0 4.6 64 285-375 12-77 (192)
22 1nnw_A Hypothetical protein; s 96.1 0.0094 3.2E-07 55.2 6.8 71 285-374 3-76 (252)
23 1ute_A Protein (II purple acid 95.7 0.0066 2.3E-07 57.3 4.1 81 284-375 7-96 (313)
24 3rl5_A Metallophosphoesterase 95.5 0.02 6.8E-07 55.5 6.7 64 285-375 61-124 (296)
25 3qfm_A SAPH, putative uncharac 95.4 0.014 4.7E-07 55.5 5.1 66 284-374 12-78 (270)
26 2kkn_A Uncharacterized protein 95.4 0.0071 2.4E-07 53.9 2.8 63 285-374 24-86 (178)
27 1sr3_A APO-CCME; OB fold, beta 95.2 0.045 1.5E-06 46.8 7.1 62 178-241 28-98 (136)
28 3rqz_A Metallophosphoesterase; 94.6 0.018 6.2E-07 53.5 3.2 66 284-375 4-69 (246)
29 1j6q_A Cytochrome C maturation 94.6 0.11 3.9E-06 44.3 7.9 62 178-241 32-103 (136)
30 2kct_A Cytochrome C-type bioge 94.2 0.1 3.4E-06 41.8 6.4 62 178-241 8-82 (94)
31 2qjc_A Diadenosine tetraphosph 94.1 0.038 1.3E-06 52.2 4.5 66 283-373 18-84 (262)
32 2ie4_C PP2A-alpha;, serine/thr 94.1 0.1 3.4E-06 50.8 7.5 73 283-374 49-121 (309)
33 1g5b_A Serine/threonine protei 94.0 0.049 1.7E-06 49.6 4.8 67 283-373 12-78 (221)
34 3ck2_A Conserved uncharacteriz 93.9 0.086 2.9E-06 46.2 6.0 58 285-375 8-65 (176)
35 2dfj_A Diadenosinetetraphospha 92.7 0.11 3.8E-06 49.6 5.1 67 285-373 2-68 (280)
36 1fjm_A Protein serine/threonin 92.3 0.24 8.2E-06 48.6 7.1 72 283-373 56-127 (330)
37 2k50_A Replication factor A re 91.4 1 3.6E-05 36.6 9.0 63 165-229 5-83 (115)
38 1wao_1 Serine/threonine protei 91.2 0.46 1.6E-05 48.4 8.1 72 284-373 213-284 (477)
39 1nnx_A Protein YGIW; structura 91.1 1.3 4.3E-05 36.4 9.0 68 166-233 24-94 (109)
40 2z72_A Protein-tyrosine-phosph 90.8 0.49 1.7E-05 46.3 7.6 74 283-373 70-152 (342)
41 1xzw_A Purple acid phosphatase 90.2 0.21 7.2E-06 50.1 4.3 80 283-375 126-205 (426)
42 3tgh_A Glideosome-associated p 90.0 0.17 5.8E-06 49.8 3.4 84 284-375 4-87 (342)
43 2qfp_A Purple acid phosphatase 89.9 0.19 6.4E-06 50.4 3.7 79 283-374 119-197 (424)
44 3e7a_A PP-1A, serine/threonine 89.6 0.78 2.7E-05 44.3 7.6 72 283-373 55-126 (299)
45 3dm3_A Replication factor A; p 89.1 3.4 0.00012 33.3 10.1 62 166-230 4-80 (105)
46 4gop_B Putative uncharacterize 88.6 1.8 6E-05 36.5 8.4 67 179-245 38-114 (136)
47 3h63_A Serine/threonine-protei 88.6 1.1 3.8E-05 43.5 8.0 72 284-373 60-131 (315)
48 3icf_A PPT, serine/threonine-p 88.2 0.98 3.4E-05 44.3 7.4 70 285-373 65-135 (335)
49 2k75_A Uncharacterized protein 88.1 2.6 9E-05 34.0 8.8 40 194-238 42-83 (106)
50 1aui_A Calcineurin, serine/thr 86.7 1.1 3.9E-05 46.3 7.0 72 283-373 82-153 (521)
51 3e0e_A Replication protein A; 86.4 2.9 0.0001 33.1 8.0 59 168-229 3-76 (97)
52 1o7i_A SSB, SSO2364, single st 86.3 5.2 0.00018 32.7 9.8 68 168-237 3-85 (119)
53 3ll8_A Serine/threonine-protei 86.2 1.6 5.5E-05 43.1 7.6 72 283-373 69-140 (357)
54 3kdf_D Replication protein A 3 86.1 2.1 7E-05 35.9 7.3 61 179-239 33-103 (132)
55 3mxn_B RECQ-mediated genome in 84.5 6.2 0.00021 33.8 9.4 51 180-230 61-112 (150)
56 2kbn_A Conserved protein; nucl 83.4 8.6 0.00029 31.0 9.7 71 167-238 5-84 (109)
57 2pi2_A Replication protein A 3 78.9 5.7 0.0002 37.4 8.1 60 180-239 74-143 (270)
58 1wjj_A Hypothetical protein F2 64.5 33 0.0011 29.2 8.8 43 194-238 66-110 (145)
59 1ynx_A Replication factor-A pr 64.1 11 0.00038 30.5 5.5 63 166-228 3-80 (114)
60 2hpi_A DNA polymerase III alph 58.5 15 0.00051 41.9 7.0 56 177-232 1041-1108(1220)
61 1jr3_D DNA polymerase III, del 58.1 32 0.0011 32.6 8.5 63 4-72 146-208 (343)
62 3b0b_C CENP-X, centromere prot 55.3 13 0.00045 28.6 4.1 63 6-74 15-77 (81)
63 4dra_E Centromere protein X; D 51.6 19 0.00064 27.9 4.4 57 12-74 25-81 (84)
64 1jmc_A Protein (replication pr 48.6 32 0.0011 31.2 6.5 66 164-229 123-206 (246)
65 2chg_A Replication factor C sm 47.5 73 0.0025 26.9 8.5 60 4-71 165-224 (226)
66 3bos_A Putative DNA replicatio 47.3 30 0.001 30.1 6.0 62 5-71 179-241 (242)
67 3m4p_A Ehasnrs, asparaginyl-tR 45.1 44 0.0015 33.8 7.4 63 168-230 20-92 (456)
68 2z1a_A 5'-nucleotidase; metal- 41.7 10 0.00034 39.3 2.0 46 283-329 29-87 (552)
69 1n9w_A Aspartyl-tRNA synthetas 39.2 69 0.0024 32.0 7.7 48 178-230 13-66 (422)
70 1hp1_A 5'-nucleotidase; metall 38.8 14 0.00047 37.8 2.5 46 284-329 9-63 (516)
71 1u9p_A PARC; unknown function; 38.4 91 0.0031 25.7 6.9 70 1-74 25-102 (120)
72 2yeq_A Apased, PHOD, alkaline 37.2 71 0.0024 32.8 7.6 79 283-375 116-215 (527)
73 2lnb_A Z-DNA-binding protein 1 33.6 93 0.0032 23.7 5.7 42 5-53 20-61 (80)
74 4gop_A Putative uncharacterize 33.0 1.5E+02 0.0052 23.8 7.5 51 178-232 18-70 (114)
75 3au7_A TIAS, putative uncharac 33.0 1.5E+02 0.0052 29.4 8.9 60 180-240 287-356 (402)
76 2pi2_E Replication protein A 1 32.6 2.2E+02 0.0076 23.9 9.7 65 172-240 36-105 (142)
77 1e1o_A Lysyl-tRNA synthetase, 32.4 1.2E+02 0.004 31.1 8.3 51 180-230 67-128 (504)
78 4gop_C Putative uncharacterize 32.0 50 0.0017 33.0 5.3 65 165-229 119-205 (444)
79 2chq_A Replication factor C sm 31.9 1.1E+02 0.0038 27.8 7.5 59 4-70 165-223 (319)
80 1njg_A DNA polymerase III subu 30.8 1.5E+02 0.0052 25.0 7.9 60 4-70 189-248 (250)
81 2xgt_A Asparaginyl-tRNA synthe 30.1 1.1E+02 0.0037 30.7 7.4 53 178-230 11-72 (435)
82 1l5w_A Maltodextrin phosphoryl 29.8 1.4E+02 0.0048 32.4 8.5 53 316-373 564-616 (796)
83 4h2g_A 5'-nucleotidase; dimer, 29.4 25 0.00084 36.3 2.6 47 283-330 25-87 (546)
84 3bju_A Lysyl-tRNA synthetase; 29.4 1.1E+02 0.0038 31.4 7.5 52 179-230 57-121 (521)
85 2kxe_A DNA polymerase II small 29.3 1.7E+02 0.0058 21.5 6.5 57 8-72 6-63 (75)
86 3zth_A STU0660; DNA binding, c 29.3 2E+02 0.0069 27.7 8.6 74 289-373 170-243 (350)
87 3kf6_A Protein STN1; OB fold, 29.3 84 0.0029 27.0 5.6 51 180-230 50-110 (159)
88 2fe3_A Peroxide operon regulat 29.2 1.8E+02 0.0062 23.9 7.7 68 1-75 1-68 (145)
89 3ive_A Nucleotidase; structura 28.3 15 0.00052 37.5 0.7 45 284-330 7-66 (509)
90 3a74_A Lysyl-tRNA synthetase; 27.2 96 0.0033 31.7 6.5 51 180-230 59-119 (493)
91 4ex5_A Lysine--tRNA ligase; st 26.6 1.1E+02 0.0037 31.6 6.8 51 180-230 89-149 (529)
92 3nem_A Aspartyl-tRNA synthetas 25.9 1.3E+02 0.0044 30.2 7.1 53 178-230 16-79 (438)
93 3ztv_A NAD nucleotidase, NADN; 25.4 38 0.0013 35.2 3.2 46 284-330 13-75 (579)
94 1jmc_A Protein (replication pr 24.4 1E+02 0.0036 27.7 5.7 64 165-228 6-84 (246)
95 3uk6_A RUVB-like 2; hexameric 24.4 1.8E+02 0.0062 27.2 7.7 65 5-72 264-329 (368)
96 2c4m_A Glycogen phosphorylase; 24.1 1.2E+02 0.004 33.0 6.6 53 316-373 554-606 (796)
97 1in4_A RUVB, holliday junction 24.0 1.6E+02 0.0055 27.7 7.1 65 5-73 185-250 (334)
98 2dgy_A MGC11102 protein; EIF-1 23.6 1.9E+02 0.0066 23.2 6.4 45 182-227 17-64 (111)
99 3qoq_A Alginate and motility r 23.6 59 0.002 24.1 3.0 34 1-34 26-59 (69)
100 1x54_A Asparaginyl-tRNA synthe 23.4 97 0.0033 31.0 5.6 53 178-230 16-79 (434)
101 4ah6_A Aspartate--tRNA ligase, 23.1 1.1E+02 0.0038 32.2 6.1 53 178-230 24-84 (617)
102 1jr3_A DNA polymerase III subu 22.1 1.2E+02 0.0043 28.3 6.0 60 4-70 182-241 (373)
103 1sxj_D Activator 1 41 kDa subu 22.0 94 0.0032 28.9 5.0 30 4-33 196-225 (353)
104 1wyd_A Hypothetical aspartyl-t 20.9 1.5E+02 0.005 29.6 6.3 51 180-230 19-76 (429)
No 1
>3e0j_A DNA polymerase subunit delta-2; DNA polymerase delta, P66 subunit, P50 subunit, human, DNA replication, DNA-directed DNA polymerase; HET: DNA; 3.00A {Homo sapiens}
Probab=99.97 E-value=4e-30 Score=264.39 Aligned_cols=259 Identities=15% Similarity=0.176 Sum_probs=181.3
Q ss_pred eeeecccccccccCCCCCccCChhHHHHHHHHHHHHHHHHHhcCCCCCCCccccccCCCCcccceecccccC-CCCc-EE
Q 014802 104 FRYDSIKKHFYQHAGSLPIHGEASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVG-QTGR-RW 181 (418)
Q Consensus 104 ~~yd~~~k~f~~~~~~~~~~~~~~~k~~~fr~Ry~~l~qrl~R~~~F~~~~~~~~~~~~~~~~it~I~~Llg-~~g~-~~ 181 (418)
..|.+..+.|.... -.=...+.++|+.|+..||.++.++.. ..+. ...+|..|+. +.|+ .+
T Consensus 37 ~~y~~~~~~F~l~~-----~~y~~QY~~iY~~RL~~Lr~~l~~~a~------~kw~------~~~~i~klldl~~ge~c~ 99 (476)
T 3e0j_A 37 ATYTNSSQPFRLGE-----RSFSRQYAHIYATRLIQMRPFLENRAQ------QHWG------SGVGVKKLCELQPEEKCC 99 (476)
T ss_dssp TCEEECCGGGCC-----------------CHHHHHHHHHHHHHHHH------HHSC------SCCCBCCSSSCCTTCCEE
T ss_pred ccccccccccccCC-----CChhHHHHHHHHHHHHHHHHHHHHHHH------HhcC------CCccchHhhcccCCCEEE
Confidence 67777666775321 112367899999999999999977542 0000 0133444433 2344 67
Q ss_pred EEEEEEEc----------------------------cCCcEEEeeCCcEEEEEeccccccceeeccCcEEEEEEEEeeCC
Q 014802 182 VMGVISQL----------------------------EDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233 (418)
Q Consensus 182 vlGml~~~----------------------------~~g~~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~G 233 (418)
|+|+|.+. .++.++|||++|||+|.. ......+++|+||+|.|.+..+|
T Consensus 100 viGTvyk~m~lKPsIL~eis~e~~~~~~~~~~~y~~~~D~l~LEDesGRv~L~g---~~~~~~lVTG~VvaV~G~~~~~G 176 (476)
T 3e0j_A 100 VVGTLFKAMPLQPSILREVSEEHNLLPQPPRSKYIHPDDELVLEDELQRIKLKG---TIDVSKLVTGTVLAVFGSVRDDG 176 (476)
T ss_dssp EEEEEEEEC----------------------CCCCCSSCEEEEECSSCEEEEEE---SCCTTTCCTTCEEEEEEEECTTS
T ss_pred EEEEEEecccCCCcHHHHHhhhhccCCCCccccccCCCceEEEECCCCEEEEEE---EcccccccCCcEEEEEEEEcCCC
Confidence 99999852 246799999999999987 23456789999999999998999
Q ss_pred eEEEEEecCCCCCCchhhhhhccCcccCCCCCCchhhhHHHHHHHHhcCCCcEEEEEccccCcHHH--HHHHHHHHhccc
Q 014802 234 IFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDTLRLADLEKRAANDMFVILSDIWLDNEEV--MGKLEVVLDGFE 311 (418)
Q Consensus 234 ~F~V~~i~~Pp~e~r~~s~~~~~~ld~~G~~~~~~~~~~~l~~~e~~~~~~~~v~lSDv~ld~~~~--l~~L~~l~~~~~ 311 (418)
.|+|.+|++|.+++... +. ....+.+++|+||+|+++..+ ..+|+.|.+|+.
T Consensus 177 ~F~V~di~~Pd~ppq~~-~~-------------------------~~~~~~~ialVSGL~igs~~~~~~~~~~ll~d~L~ 230 (476)
T 3e0j_A 177 KFLVEDYCFADLAPQKP-AP-------------------------PLDTDRFVLLVSGLGLGGGGGESLLGTQLLVDVVT 230 (476)
T ss_dssp SEEEEEEEECBCCCCCC-CC-------------------------CCSSCCEEEEECCCCBTSSCHHHHHHHHHHHHHHH
T ss_pred eEEEEEEEcCCCCCCCC-CC-------------------------cCCCCCEEEEECCcccCCCcccchHHHHHHHHHHc
Confidence 99999999999876321 00 012567999999999999853 456666666554
Q ss_pred CC---------CCCCeEEEEEcCCCCCCCCCCCc----ch------HHHHHHHHHHHHHHhcCCCccccceEEEecCCCC
Q 014802 312 SV---------EVVPSLFVFMGNFCSHPCNLSFH----SF------SSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDD 372 (418)
Q Consensus 312 ~~---------~~~p~~~Vl~Gnf~s~~~~~~~~----~~------~~~~~~f~~La~~l~~~p~l~~~~~~v~vPG~~D 372 (418)
+. -....++||+||.+++....... .+ ....++++.|+++|++ |+.++++++|||+||
T Consensus 231 G~~g~~~~~~~as~I~rlIIAGn~v~~~~~~~e~~~~~~y~~~~~~~~~~~~~~~ld~~L~~---l~~~i~V~lmPG~~D 307 (476)
T 3e0j_A 231 GQLGDEGEQCSAAHVSRVILAGNLLSHSTQSRDSINKAKYLTKKTQAASVEAVKMLDEILLQ---LSASVPVDVMPGEFD 307 (476)
T ss_dssp TCSSCHHHHHHHTTEEEEEEESCSBCC-------------CHHHHHHHHHHHHHHHHHHHHH---HHTTSCEEEECCTTS
T ss_pred CCCCCccccchhhceeEEEEECCccccccccchhhhhhhccccccchhhHHHHHHHHHHHHh---cccCceEEecCCCCC
Confidence 21 02468999999999986321100 01 1234688899999996 667899999999999
Q ss_pred CCCCCCCCCCCcchHHHHHHHhhCCCeEEecCCcEEEEccc
Q 014802 373 AGPSTVLPRCALPKYLTEELQKYIPNAIFSSNPCRLNFLIT 413 (418)
Q Consensus 373 p~~~~~lPqpplp~~~~~~~~~~~~~~~~~sNP~ri~~~~~ 413 (418)
|++ .+|||||||+++++..+ .+.++.++|||+.+++.+.
T Consensus 308 P~~-~~lPQqplh~~lfp~s~-~~~~~~~vtNP~~~~i~G~ 346 (476)
T 3e0j_A 308 PTN-YTLPQQPLHPCMFPLAT-AYSTLQLVTNPYQATIDGV 346 (476)
T ss_dssp SSC-SSSSCCCCCTTSCHHHH-TSTTEEECCSSEEEEETTE
T ss_pred ccc-ccCCCCCcCHHHhhhhh-hcCccEEeCCCeEEEECCE
Confidence 998 99999999999999875 5689999999999998875
No 2
>3flo_A DNA polymerase alpha subunit B; protein-protein complex, phosphoesterase fold, OB fold, zinc motif, DNA replication, nucleus; HET: DNA; 2.50A {Saccharomyces cerevisiae}
Probab=99.88 E-value=3.1e-21 Score=197.62 Aligned_cols=247 Identities=18% Similarity=0.260 Sum_probs=170.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHhcCCCCCCCccccccCCCCcccceecccccCCCCcEEEEEEEEEcc---CCc-----EEE
Q 014802 125 EASAKAALYRDRFLLLFQRVSRDQHFSRPSFDVVNSEFGSCEISTIQSLVGQTGRRWVMGVISQLE---DGH-----FYL 196 (418)
Q Consensus 125 ~~~~k~~~fr~Ry~~l~qrl~R~~~F~~~~~~~~~~~~~~~~it~I~~Llg~~g~~~vlGml~~~~---~g~-----~~L 196 (418)
...+++++..+|-....+.+..+-......++ +.. .-++..++++|+|.... +|+ +.|
T Consensus 8 kl~e~~~vLd~~I~~~~~~~~~~~~~~~~~f~------------~p~--~~sq~~v~~vGRI~~Ds~~~egkLn~~Sl~L 73 (460)
T 3flo_A 8 NLQEASDVLDDQIESFTKIIQNHYKLSPNDFA------------DPT--IQSQSEIYAVGRIVPDSPTYDKFLNPESLSL 73 (460)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTCCGGGBC------------CTT--SCCSSCEEEEEEEEESSSSCCSCCCTTSEEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCccccC------------Ccc--cCccccEEEEEEEeeCCCCCCCCcchhheEE
Confidence 45677888888877777666554221100111 110 11346688999998764 665 668
Q ss_pred eeC----Cc-EEEEEeccccccceeeccCcEEEEEEEEeeCCeEEEEEecCCCCCCchhhhhhccCcccCCCCCCchhhh
Q 014802 197 EDL----AA-SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCGFPPLEDRDQSLKLLAGYDFFGGGTLKKEDT 271 (418)
Q Consensus 197 ED~----tG-~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~G~F~V~~i~~Pp~e~r~~s~~~~~~ld~~G~~~~~~~~~ 271 (418)
|-. .| ||+||+++.. ...+| +|+||+++|....++.|.|.+|.-+|..+...+ +.
T Consensus 74 E~sr~~g~G~rV~Ldls~l~-~~slF-PGQIVav~G~N~~G~~f~v~ei~~~P~~~~p~s---------------~~--- 133 (460)
T 3flo_A 74 ETSRMGGVGRRVRLDLSQVN-ELSFF-LGQIVAFKGKNANGDYFTVNSILPLPYPNSPVS---------------TS--- 133 (460)
T ss_dssp ECCHHHHTTCEEEEECTTCC-CEEEC-TTCEEEEEEECSSSSCEEEEEECCCCCCCCCEE---------------EH---
T ss_pred EeccccCCCeEEEeecccCC-ceeec-CCCEEEEEEEcCCCCEEEEeeeccCCCCCCCCC---------------CH---
Confidence 853 34 9999999753 45778 999999999986777899999986665432111 11
Q ss_pred HHHHHH-HHh-cCCCcEEEEEccccCcHHH-HHHHHHHHhcccCCCCCCeEEEEEcCCCCCC------CCC---CC--cc
Q 014802 272 LRLADL-EKR-AANDMFVILSDIWLDNEEV-MGKLEVVLDGFESVEVVPSLFVFMGNFCSHP------CNL---SF--HS 337 (418)
Q Consensus 272 ~~l~~~-e~~-~~~~~~v~lSDv~ld~~~~-l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~------~~~---~~--~~ 337 (418)
..+... +.. ...-++++.|+-+..+... ++.|..|+++..+. .+|.++||||+|++.. +.. .+ ..
T Consensus 134 ~~l~~~~~~~~~~~l~ivvAsGPyT~sdnl~yepL~~Ll~~v~~~-~kPdvLIL~GPFvD~~hp~i~~G~~p~~~~~~~~ 212 (460)
T 3flo_A 134 QELQEFQANLEGSSLKVIVTCGPYFANDNFSLELLQEFIDSINNE-VKPHVLIMFGPFIDITHPLIASGKLPNFPQFKTQ 212 (460)
T ss_dssp HHHHHHHHHHTSSCEEEEEEESCCSCSSCCCCHHHHHHHHHCCCC-CCCSEEEEESCSSBTTCHHHHHTCCCCCTTCSSC
T ss_pred HHhhhhhhhccCCCcEEEEEeCCccCCCccChHHHHHHHHHHHhc-cCCCEEEEecCcccccCcccccCccccccccccc
Confidence 111111 111 2456789999988877644 69999999988652 3699999999999863 111 00 01
Q ss_pred hHHHHHHHHHH-HHHHhcCCCccccceEEEecCCCCCCC-CCCCCCCCcchHHHHHHHhhCC-CeEEecCCcEEEEccc
Q 014802 338 FSSLRLQFGKL-GQMIAAHPRLKEHSRFLFIPGPDDAGP-STVLPRCALPKYLTEELQKYIP-NAIFSSNPCRLNFLIT 413 (418)
Q Consensus 338 ~~~~~~~f~~L-a~~l~~~p~l~~~~~~v~vPG~~Dp~~-~~~lPqpplp~~~~~~~~~~~~-~~~~~sNP~ri~~~~~ 413 (418)
...|.+.|+++ +.+|.+ +..+++||||||++|++. ..++||||||+... ...+ |++|+||||+|++++.
T Consensus 213 ~~t~~~lF~~~i~~il~~---l~~~t~VVlVPS~rD~~~~~~v~PQPpf~~k~l----~l~k~nv~~~sNPc~~~in~v 284 (460)
T 3flo_A 213 PKTLDELFLKLFTPILKT---ISPHIQTVLIPSTKDAISNHAAYPQASLIRKAL----QLPKRNFKCMANPSSFQINEI 284 (460)
T ss_dssp CSSHHHHHHHHTHHHHTT---SCTTSEEEEECCTTBTTCSCCSBSBCCCCTTTT----TCCTTTEEECCBSEEEEETTE
T ss_pred ccCHHHHHHHHHHHHHHh---ccCCCEEEEeCCcccccCCCCCcCCCCCChhhh----cCCcccEEEeCCCEEEEECCE
Confidence 35677888775 667775 457899999999999985 47999999997533 2234 8999999999999886
No 3
>2v6z_M DNA polymerase epsilon subunit 2; DNA replication, DPOE2, transferase, AAA protein family; HET: DNA; NMR {Homo sapiens}
Probab=99.49 E-value=9.4e-14 Score=112.93 Aligned_cols=72 Identities=19% Similarity=0.390 Sum_probs=67.2
Q ss_pred CC-hHHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCCh-HHHHHHHHHHHhhccCCCcccccHHHHHHHHHHH
Q 014802 1 MS-GQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE-DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVL 73 (418)
Q Consensus 1 m~-~~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~-~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~~ 73 (418)
|+ .++|++|+++||++||+|++||++||++++.+....+ ++|++.|+++|.|+ ++++++||++.|+.++++|
T Consensus 25 M~~~rlrk~I~k~FKL~Gl~Lr~dA~~~L~~~L~~~~~~e~e~~L~~Iid~lqkq-~LsS~~Vdk~~VE~AVkEc 98 (99)
T 2v6z_M 25 MAPERLRSRALSAFKLRGLLLRGEAIKYLTEALQSISELELEDKLEKIINAVEKQ-PLSSNMIERSVVEAAVQES 98 (99)
T ss_dssp CCHHHHHHHHHHHHHHTTCEECHHHHHHHHHHTTTSCTTTHHHHHHHHHHHHTTS-CCSSSEECHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhhhcceeecHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHhC-cCccccccHHHHHHHHHHh
Confidence 67 4999999999999999999999999999999886644 58999999999999 9999999999999999987
No 4
>3d03_A Phosphohydrolase; glycerophosphodiesterase, metallohydrolase, phosphatase, metal ION; 1.90A {Enterobacter aerogenes} SCOP: d.159.1.11 PDB: 2zoa_A 2zo9_B 2dxn_A 2dxl_A
Probab=97.65 E-value=8.8e-05 Score=69.47 Aligned_cols=75 Identities=16% Similarity=0.282 Sum_probs=52.3
Q ss_pred cEEEEEccccCcH--------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCC
Q 014802 285 MFVILSDIWLDNE--------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHP 356 (418)
Q Consensus 285 ~~v~lSDv~ld~~--------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p 356 (418)
+|+++||+|++.+ ...+.|+.+++.+.+....|..+|++||+++... .. .++.+.++|.++
T Consensus 2 ri~~iSD~H~~~~~~~~~g~~~~~~~l~~~l~~~~~~~~~~d~vi~~GDl~~~~~------~~----~~~~~~~~l~~l- 70 (274)
T 3d03_A 2 LLAHISDTHFRSRGEKLYGFIDVNAANADVVSQLNALRERPDAVVVSGDIVNCGR------PE----EYQVARQILGSL- 70 (274)
T ss_dssp EEEEECCCCBCSTTCCBTTTBCHHHHHHHHHHHHHTCSSCCSEEEEESCCBSSCC------HH----HHHHHHHHHTTC-
T ss_pred EEEEEecCCcCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC------HH----HHHHHHHHHHhc-
Confidence 4889999999862 4456778787776543224789999999986421 12 234455666543
Q ss_pred CccccceEEEecCCCCCC
Q 014802 357 RLKEHSRFLFIPGPDDAG 374 (418)
Q Consensus 357 ~l~~~~~~v~vPG~~Dp~ 374 (418)
..++++||||||..
T Consensus 71 ----~~p~~~v~GNHD~~ 84 (274)
T 3d03_A 71 ----NYPLYLIPGNHDDK 84 (274)
T ss_dssp ----SSCEEEECCTTSCH
T ss_pred ----CCCEEEECCCCCCH
Confidence 36899999999973
No 5
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=97.54 E-value=9.6e-05 Score=71.27 Aligned_cols=79 Identities=16% Similarity=0.306 Sum_probs=50.4
Q ss_pred CcEEEEEccccCcH--------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcC
Q 014802 284 DMFVILSDIWLDNE--------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355 (418)
Q Consensus 284 ~~~v~lSDv~ld~~--------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~ 355 (418)
-+|+++||+|++.. .....|+.+++........|..+|++||+++... ...+..+.+.++.|.+-+
T Consensus 26 ~ri~~iSD~H~~~~~~~~~~~~~~~~~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~---~~~~~~~~~~l~~l~~~~--- 99 (330)
T 3ib7_A 26 YVLLHISDTHLIGGDRRLYGAVDADDRLGELLEQLNQSGLRPDAIVFTGDLADKGE---PAAYRKLRGLVEPFAAQL--- 99 (330)
T ss_dssp EEEEEECCCCBCSSSCCBTTTBCHHHHHHHHHHHHHHHTCCCSEEEECSCCBTTCC---HHHHHHHHHHHHHHHHHH---
T ss_pred eEEEEEeCCccCCCCcccccccCHHHHHHHHHHHHHhcCCCCCEEEECCCCCCCCC---HHHHHHHHHHHHHHHhhc---
Confidence 46899999999643 3456677777766541125889999999986421 122333334444332221
Q ss_pred CCccccceEEEecCCCCC
Q 014802 356 PRLKEHSRFLFIPGPDDA 373 (418)
Q Consensus 356 p~l~~~~~~v~vPG~~Dp 373 (418)
.+++++||||||.
T Consensus 100 -----~~pv~~v~GNHD~ 112 (330)
T 3ib7_A 100 -----GAELVWVMGNHDD 112 (330)
T ss_dssp -----TCEEEECCCTTSC
T ss_pred -----CCCEEEeCCCCCC
Confidence 3689999999995
No 6
>1uf3_A Hypothetical protein TT1561; metallo-dependent phosphatases, structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.10A {Thermus thermophilus} SCOP: d.159.1.6
Probab=97.52 E-value=0.00015 Score=65.82 Aligned_cols=71 Identities=21% Similarity=0.263 Sum_probs=45.3
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
-+++++||+|++.. .++.+++...+. .|..+|++||+++... ....+.+.++.| ++. ..+
T Consensus 6 mri~~iSD~H~~~~----~~~~~~~~~~~~--~~D~vi~~GDl~~~~~-----~~~~~~~~~~~l----~~~-----~~p 65 (228)
T 1uf3_A 6 RYILATSNPMGDLE----ALEKFVKLAPDT--GADAIALIGNLMPKAA-----KSRDYAAFFRIL----SEA-----HLP 65 (228)
T ss_dssp CEEEEEECCTTCHH----HHHHHHTHHHHH--TCSEEEEESCSSCTTC-----CHHHHHHHHHHH----GGG-----CSC
T ss_pred EEEEEEeeccCCHH----HHHHHHHHHhhc--CCCEEEECCCCCCCCC-----CHHHHHHHHHHH----Hhc-----CCc
Confidence 46899999998743 344455443321 4789999999986431 123344434433 321 357
Q ss_pred EEEecCCCCCC
Q 014802 364 FLFIPGPDDAG 374 (418)
Q Consensus 364 ~v~vPG~~Dp~ 374 (418)
+++||||||..
T Consensus 66 v~~v~GNHD~~ 76 (228)
T 1uf3_A 66 TAYVPGPQDAP 76 (228)
T ss_dssp EEEECCTTSCS
T ss_pred EEEECCCCCch
Confidence 99999999964
No 7
>4fbk_A DNA repair and telomere maintenance protein NBS1, protein RAD32 chimeric protein; DNA double-strand break repair, nuclease; HET: DNA; 2.38A {Schizosaccharomyces pombe} PDB: 4fbq_A*
Probab=97.36 E-value=0.00016 Score=74.53 Aligned_cols=86 Identities=16% Similarity=0.131 Sum_probs=56.9
Q ss_pred CcEEEEEccccCcHH--------HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHH----
Q 014802 284 DMFVILSDIWLDNEE--------VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM---- 351 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~--------~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~---- 351 (418)
-+|+.+||+||+... ..+.|+.+++...+. .|..+|++||+++.... +.......++.|...
T Consensus 77 mrilhiSDlHLG~~~~~~~~~~d~~~~l~~lv~~~~~~--~~D~VliaGDLfd~~~p----s~~a~~~~~~~Lr~~~~g~ 150 (472)
T 4fbk_A 77 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER--DVDMILLGGDIFHDNKP----SRKALYQALRSLRLNCLGD 150 (472)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT--TCSEEEECSCSBSSSSC----CHHHHHHHHHHHHHHHBSS
T ss_pred eEEEEEecccCCCcccCcccchhHHHHHHHHHHHHHhc--CCCEEEEcCccccCCCC----CHHHHHHHHHHHHHhcccC
Confidence 358889999999653 455677777665443 58999999999887532 223333334444431
Q ss_pred -------Hh---------cC-------CCccccceEEEecCCCCCCC
Q 014802 352 -------IA---------AH-------PRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 352 -------l~---------~~-------p~l~~~~~~v~vPG~~Dp~~ 375 (418)
|+ .| |++-..+++++|+||||+..
T Consensus 151 ~~~~~e~L~d~~~~~~~~~~~~vn~~dp~~~~gIpVf~I~GNHD~~~ 197 (472)
T 4fbk_A 151 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPS 197 (472)
T ss_dssp CCCCCEEEEEC-----CCCSCSSSTTCTTBCBSSCEEECCCCCCSCC
T ss_pred CcchheecchhhhhcccccccccccccccccCCCcEEEEecCCCCcc
Confidence 22 12 33456899999999999864
No 8
>4fbw_A DNA repair protein RAD32; DNA double-strand break repair, nuclease, hydrolase; HET: DNA; 2.20A {Schizosaccharomyces pombe} PDB: 4fcx_B*
Probab=97.32 E-value=0.00017 Score=73.43 Aligned_cols=86 Identities=15% Similarity=0.128 Sum_probs=54.5
Q ss_pred CcEEEEEccccCcH--------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHH----
Q 014802 284 DMFVILSDIWLDNE--------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQM---- 351 (418)
Q Consensus 284 ~~~v~lSDv~ld~~--------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~---- 351 (418)
-+|+.+||+||+.+ ...+.|+.+++...+. .|..+|++||+++.... +...+...++.|...
T Consensus 14 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~lv~~~~~~--~~D~VliaGDLfd~~~p----~~~~~~~~~~~lr~~~~g~ 87 (417)
T 4fbw_A 14 IRILISSDPHVGYGEKDPVRGNDSFVSFNEILEIARER--DVDMILLGGDIFHDNKP----SRKALYQALRSLRLNCLGD 87 (417)
T ss_dssp EEEEEECCCCBTTTTTCTTTTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBSSSSC----CHHHHHHHHHHHHHHHBSS
T ss_pred eEEEEEEcCCCCCcccccccchhHHHHHHHHHHHHHhc--CCCEEEEcCccccCCCC----CHHHHHHHHHHHHHhcccC
Confidence 46888999999965 2456677777665443 58999999999887532 122233333333331
Q ss_pred -------Hh---------cC-------CCccccceEEEecCCCCCCC
Q 014802 352 -------IA---------AH-------PRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 352 -------l~---------~~-------p~l~~~~~~v~vPG~~Dp~~ 375 (418)
|+ .| |++-..+++++|+||||+..
T Consensus 88 ~~~~~e~L~d~~~~~~~~~~~~~n~~d~~~~~gIpV~~I~GNHD~~~ 134 (417)
T 4fbw_A 88 KPCELELLSDTSLTTGDTAVCNINYLDPNINVAIPVFSIHGNHDDPS 134 (417)
T ss_dssp CCCCCEECC------------CCGGGCTTBCBSSCEEECCCGGGC--
T ss_pred CcccceeccchhhhcccccccccccccccccCCCeEEEEecCCCCcc
Confidence 21 12 34456899999999999854
No 9
>1ii7_A MRE11 nuclease; RAD50, DNA double-strand break repair, DAMP, manganese, replication; HET: DA; 2.20A {Pyrococcus furiosus} SCOP: d.159.1.4 PDB: 3dsc_A* 3dsd_A* 1s8e_A
Probab=97.30 E-value=0.00036 Score=68.32 Aligned_cols=79 Identities=15% Similarity=0.121 Sum_probs=47.5
Q ss_pred cEEEEEccccCcHH---------HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcC
Q 014802 285 MFVILSDIWLDNEE---------VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355 (418)
Q Consensus 285 ~~v~lSDv~ld~~~---------~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~ 355 (418)
+|+.+||+|++... +.+.|+.+++...+. .|..+|++||+++.... +......+.+.+..|. +
T Consensus 2 kilh~sD~Hlg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~D~vl~~GDl~d~~~~-~~~~~~~~~~~l~~l~----~- 73 (333)
T 1ii7_A 2 KFAHLADIHLGYEQFHKPQREEEFAEAFKNALEIAVQE--NVDFILIAGDLFHSSRP-SPGTLKKAIALLQIPK----E- 73 (333)
T ss_dssp EEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHHT--TCSEEEEESCSBSSSSC-CHHHHHHHHHHHHHHH----T-
T ss_pred EEEEEcccCCCCcccCCchhhHHHHHHHHHHHHHHHhc--CCCEEEECCCcCCCCCC-CHHHHHHHHHHHHHHH----H-
Confidence 47889999999642 224455555544332 58899999999886421 1111222222233222 1
Q ss_pred CCccccceEEEecCCCCCCC
Q 014802 356 PRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 356 p~l~~~~~~v~vPG~~Dp~~ 375 (418)
..+++++||||||...
T Consensus 74 ----~~~~v~~v~GNHD~~~ 89 (333)
T 1ii7_A 74 ----HSIPVFAIEGNHDRTQ 89 (333)
T ss_dssp ----TTCCEEEECCTTTCCS
T ss_pred ----CCCcEEEeCCcCCCcc
Confidence 1468999999999853
No 10
>2q8u_A Exonuclease, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.20A {Thermotoga maritima MSB8} PDB: 3thn_A
Probab=97.24 E-value=0.00047 Score=67.46 Aligned_cols=77 Identities=19% Similarity=0.250 Sum_probs=43.1
Q ss_pred cEEEEEccccC----cH--------HHHHHHHHHHhcccCCCCCCeEEEEEcC-CCCCCCCCCCcchHHHHHHHHHHHHH
Q 014802 285 MFVILSDIWLD----NE--------EVMGKLEVVLDGFESVEVVPSLFVFMGN-FCSHPCNLSFHSFSSLRLQFGKLGQM 351 (418)
Q Consensus 285 ~~v~lSDv~ld----~~--------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gn-f~s~~~~~~~~~~~~~~~~f~~La~~ 351 (418)
+|+.+||+||+ .. ...+.|+.+++...+. .|..+|++|| +++.... +......+.+.|.+|.+
T Consensus 20 rilh~SD~HlG~~~~~~~~~~~r~~~~~~~l~~lv~~~~~~--~~D~vliaGD~l~d~~~~-~~~~~~~~~~~l~~L~~- 95 (336)
T 2q8u_A 20 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR--EVDLILLTGDLLHSRNNP-SVVALHDLLDYLKRMMR- 95 (336)
T ss_dssp EEEEEECCCBTCEECTTTCCEECHHHHHHHHHHHHHHHHHH--TCSEEEEESCSBSCSSCC-CHHHHHHHHHHHHHHHH-
T ss_pred EEEEECcccCCCCccccccCcChhHHHHHHHHHHHHHHHHh--CCCEEEECCccccCCCCC-CHHHHHHHHHHHHHHHh-
Confidence 58889999999 32 1234455555544332 5789999999 8875421 11112233344444322
Q ss_pred HhcCCCccccceEEEecCCCCCC
Q 014802 352 IAAHPRLKEHSRFLFIPGPDDAG 374 (418)
Q Consensus 352 l~~~p~l~~~~~~v~vPG~~Dp~ 374 (418)
.+++++||||||..
T Consensus 96 ---------~~pv~~i~GNHD~~ 109 (336)
T 2q8u_A 96 ---------TAPVVVLPGNHDWK 109 (336)
T ss_dssp ---------HSCEEECCC-----
T ss_pred ---------cCCEEEECCCCCcc
Confidence 15899999999974
No 11
>3av0_A DNA double-strand break repair protein MRE11; DNA repair, calcineurin-like phosphoesterase, ABC transporte domain-like; HET: DNA AGS; 3.10A {Methanocaldococcus jannaschii} PDB: 3auz_A*
Probab=97.22 E-value=0.00049 Score=68.93 Aligned_cols=81 Identities=14% Similarity=0.297 Sum_probs=50.2
Q ss_pred CCcEEEEEccccCcH---------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHh
Q 014802 283 NDMFVILSDIWLDNE---------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA 353 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~---------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~ 353 (418)
.-+|+.+||+|++.+ ...+.|+.+++..... .|..+|++||+++.... +......+.+.+.+|..
T Consensus 20 ~mrilhiSD~Hlg~~~~~~~~r~~~~~~~l~~~v~~~~~~--~~D~VliaGDl~d~~~p-~~~~~~~~~~~l~~L~~--- 93 (386)
T 3av0_A 20 HMMFVHIADNHLGYRQYNLDDREKDIYDSFKLCIKKILEI--KPDVVLHSGDLFNDLRP-PVKALRIAMQAFKKLHE--- 93 (386)
T ss_dssp CCEEEEECCCCBTCCGGGCHHHHHHHHHHHHHHHHHHHTT--CCSEEEECSCSBSSSSC-CHHHHHHHHHHHHHHHH---
T ss_pred CeEEEEEccCCCCccccCcchhhHHHHHHHHHHHHHHHHc--CCCEEEECCCCCCCCCC-CHHHHHHHHHHHHHHHh---
Confidence 346889999999963 1234566666655432 58899999999876422 11111222233333321
Q ss_pred cCCCccccceEEEecCCCCCCC
Q 014802 354 AHPRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 354 ~~p~l~~~~~~v~vPG~~Dp~~ 375 (418)
..+++++||||||...
T Consensus 94 ------~~~pv~~v~GNHD~~~ 109 (386)
T 3av0_A 94 ------NNIKVYIVAGNHEMPR 109 (386)
T ss_dssp ------TTCEEEECCCGGGSCS
T ss_pred ------cCCcEEEEcCCCCCCc
Confidence 1368999999999864
No 12
>3t1i_A Double-strand break repair protein MRE11A; DNA repair, MRN complex, metallophosphatase, exonuclease, endonuclease, RAD50, NBS1, hydrolase; 3.00A {Homo sapiens}
Probab=97.20 E-value=0.00032 Score=71.63 Aligned_cols=89 Identities=13% Similarity=0.119 Sum_probs=54.0
Q ss_pred CcEEEEEccccCcHH--------HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHH------
Q 014802 284 DMFVILSDIWLDNEE--------VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLG------ 349 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~--------~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La------ 349 (418)
-+|+.+||+||+... ..+.|+.+++...+. .|..+|++||+.+..... ......+.+.+.++.
T Consensus 33 mrilhiSDlHLg~~~~~~~~~~d~~~~l~~ll~~~~~~--~~D~VliaGDlfd~~~~~-~~~~~~~~~~L~r~~~~~~~~ 109 (431)
T 3t1i_A 33 FKILVATDIHLGFMEKDAVRGNDTFVTLDEILRLAQEN--EVDFILLGGDLFHENKPS-RKTLHTCLELLRKYCMGDRPV 109 (431)
T ss_dssp EEEEEECCCCBTTTSSCTTTTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBSSSSCC-HHHHHHHHHHHHHHHBCSSCC
T ss_pred EEEEEEeccCCCCcccccchhhhHHHHHHHHHHHHhhc--CCCEEEEcCccccCCCCC-HHHHHHHHHHHHHHhccCCcc
Confidence 358889999999752 334566666554432 588999999998875321 122233333333332
Q ss_pred --HHHh----------------cCCCccccceEEEecCCCCCCC
Q 014802 350 --QMIA----------------AHPRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 350 --~~l~----------------~~p~l~~~~~~v~vPG~~Dp~~ 375 (418)
++|+ +.|++-..+++++|+||||...
T Consensus 110 ~~~~lsd~~~~~~~~~~~~~ny~d~n~~~~ipV~~I~GNHD~~~ 153 (431)
T 3t1i_A 110 QFEILSDQSVNFGFSKFPWVNYQDGNLNISIPVFSIHGNHDDPT 153 (431)
T ss_dssp CCEECSCC------------------CCBCSCEEECCCSSSCCB
T ss_pred cceeccchhhccccccccccccccccccCCCcEEEEccCCCCcc
Confidence 0111 1245556799999999999754
No 13
>3tho_B Exonuclease, putative; adenosine triphosphate, bacterial proteins, DNA breaks, DOUB stranded, DNA repair, DNA repair enzymes; HET: ADP; 2.61A {Thermotoga maritima} PDB: 3qg5_C
Probab=97.18 E-value=0.00043 Score=69.30 Aligned_cols=76 Identities=20% Similarity=0.245 Sum_probs=45.7
Q ss_pred cEEEEEccccCcH------------HHHHHHHHHHhcccCCCCCCeEEEEEcCCC-CCCCCCCCcchHHHHHHHHHHHHH
Q 014802 285 MFVILSDIWLDNE------------EVMGKLEVVLDGFESVEVVPSLFVFMGNFC-SHPCNLSFHSFSSLRLQFGKLGQM 351 (418)
Q Consensus 285 ~~v~lSDv~ld~~------------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~-s~~~~~~~~~~~~~~~~f~~La~~ 351 (418)
+|+.+||+||+.. .....|..+.+..... .|..+|++||++ ++... +...+..+.+.+..|...
T Consensus 2 rilh~SD~Hlg~~~~~~~~g~~~~~~~~~~l~~l~~~~~~~--~~D~vliaGDl~hd~~~~-~~~~~~~~~~~l~~l~~~ 78 (379)
T 3tho_B 2 KILHTSDWHLGVTSWTSSRPVDRREELKKALDKVVEEAEKR--EVDLILLTGDLLHSRNNP-SVVALHDLLDYLKRMMRT 78 (379)
T ss_dssp EEEEECCCCBTCEECSSSSCEECHHHHHHHHHHHHHHHHHH--TCSEEEECSCCBSCSSSC-CHHHHHHHHHHHHHHHHH
T ss_pred eEEEEcccCCCCCccccccCcChhHHHHHHHHHHHHHHHhc--CCCEEEECCCccccCCCC-CHHHHHHHHHHHHHHHhC
Confidence 4788999999987 1123344444333222 588999999999 65432 111223333333333321
Q ss_pred HhcCCCccccceEEEecCCCCC
Q 014802 352 IAAHPRLKEHSRFLFIPGPDDA 373 (418)
Q Consensus 352 l~~~p~l~~~~~~v~vPG~~Dp 373 (418)
+++++||||||.
T Consensus 79 ----------~~v~~i~GNHD~ 90 (379)
T 3tho_B 79 ----------APVVVLPGNQDW 90 (379)
T ss_dssp ----------SCEEECCCTTSC
T ss_pred ----------CCEEEEcCCCcc
Confidence 589999999994
No 14
>2yvt_A Hypothetical protein AQ_1956; structural genomics, unknown function, NPPSFA, national PROJ protein structural and functional analyses; 1.60A {Aquifex aeolicus} SCOP: d.159.1.6
Probab=97.17 E-value=0.00095 Score=62.07 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=27.8
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCC
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH 329 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~ 329 (418)
-+|+++||+|++... |+.+++..... .|..+|++||+++.
T Consensus 6 mri~~iSDlH~~~~~----~~~~l~~~~~~--~~D~vi~~GDl~~~ 45 (260)
T 2yvt_A 6 RKVLAIKNFKERFDL----LPKLKGVIAEK--QPDILVVVGNILKN 45 (260)
T ss_dssp CEEEEEECCTTCGGG----HHHHHHHHHHH--CCSEEEEESCCCCC
T ss_pred EEEEEEeecCCChHH----HHHHHHHHHhc--CCCEEEECCCCCCc
Confidence 468999999998654 33344333221 47899999999875
No 15
>2nxf_A Putative dimetal phosphatase; dinuclear metal center phosphatase, metalloprotein, metallophosphoesterase, protein structure initiative; 1.70A {Danio rerio} SCOP: d.159.1.12
Probab=97.09 E-value=0.00024 Score=67.65 Aligned_cols=80 Identities=9% Similarity=-0.007 Sum_probs=53.0
Q ss_pred CCcEEEEEccccCcH---------------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHH
Q 014802 283 NDMFVILSDIWLDNE---------------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGK 347 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~---------------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~ 347 (418)
.-+|+++||+|++.. ..++.|+.+++.+... .|..+|++||+++........ ..+.|+.
T Consensus 5 ~~~i~~isD~H~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~d~vi~~GD~~~~~~~~~~~----~~~~~~~ 78 (322)
T 2nxf_A 5 VFTFGLIADVQYADIEDGENYLRTRRRYYRGSADLLRDAVLQWRRE--RVQCVVQLGDIIDGHNRRRDA----SDRALDT 78 (322)
T ss_dssp SEEEEEECCCCBCSSCCEECTTSSSEECTTHHHHHHHHHHHHHHHT--TCSEEEECSCCBCTHHHHTTC----HHHHHHH
T ss_pred ceEEEEEeeccccccCcccccccchHHHHHHHHHHHHHHHHHHHhc--CCCEEEECCCccCCCCCcchH----HHHHHHH
Confidence 357899999999973 2345677776665442 588999999998652110000 1234455
Q ss_pred HHHHHhcCCCccccceEEEecCCCCC
Q 014802 348 LGQMIAAHPRLKEHSRFLFIPGPDDA 373 (418)
Q Consensus 348 La~~l~~~p~l~~~~~~v~vPG~~Dp 373 (418)
+.+.+.++ ..++++||||||.
T Consensus 79 ~~~~l~~~-----~~p~~~v~GNHD~ 99 (322)
T 2nxf_A 79 VMAELDAC-----SVDVHHVWGNHEF 99 (322)
T ss_dssp HHHHHHTT-----CSEEEECCCHHHH
T ss_pred HHHHHHhc-----CCcEEEecCCCCc
Confidence 55666543 3689999999998
No 16
>1xm7_A Hypothetical protein AQ_1665; structural genomics, protein structure initi midwest center for structural genomics, PSI, MCSG, unknown; 2.40A {Aquifex aeolicus} SCOP: d.159.1.8
Probab=97.03 E-value=0.0012 Score=59.42 Aligned_cols=73 Identities=22% Similarity=0.303 Sum_probs=43.7
Q ss_pred cEEEEEccccCcHHHH---------HHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcC
Q 014802 285 MFVILSDIWLDNEEVM---------GKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAH 355 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l---------~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~ 355 (418)
+++++||+|++..... +.++.+++.+.+....|..+|++||++... .... + +.++|.+.
T Consensus 3 ~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~D~vi~~GDl~~~~-----~~~~---~----~~~~l~~l 70 (195)
T 1xm7_A 3 MMYFISDTHFYHENIINLNPEVRFKGFEIVILTNLLKVLKPEDTLYHLGDFTWHF-----NDKN---E----YLRIWKAL 70 (195)
T ss_dssp CEEEEBCCCBTCTTHHHHSTTTCCTTHHHHHHHHHHTTCCTTCEEEECSCCBSCS-----CCTT---S----HHHHHHHS
T ss_pred EEEEEeccccCCCccccccCCCCHHHHHHHHHHHHHHhCCCCCEEEECCCCCCCc-----hhHH---H----HHHHHHHC
Confidence 5889999999865431 122333333332112578999999998652 1111 1 22334433
Q ss_pred CCccccceEEEecCCCCCC
Q 014802 356 PRLKEHSRFLFIPGPDDAG 374 (418)
Q Consensus 356 p~l~~~~~~v~vPG~~Dp~ 374 (418)
+ .++++||||||..
T Consensus 71 ~-----~~~~~v~GNhD~~ 84 (195)
T 1xm7_A 71 P-----GRKILVMGNHDKD 84 (195)
T ss_dssp S-----SEEEEECCTTCCC
T ss_pred C-----CCEEEEeCCCCCc
Confidence 2 3799999999974
No 17
>2xmo_A LMO2642 protein; phosphodiesterase, hydrolase; 1.70A {Listeria monocytogenes}
Probab=96.84 E-value=0.0022 Score=64.91 Aligned_cols=78 Identities=15% Similarity=0.216 Sum_probs=48.6
Q ss_pred CcEEEEEccccCcHH----------------------HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHH
Q 014802 284 DMFVILSDIWLDNEE----------------------VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSL 341 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~----------------------~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~ 341 (418)
-+|+++||+|++.+. ..+.|+.+++..... .|..+|++||++.... ...+
T Consensus 40 ~~i~~iSD~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~d~vi~~GDl~~~~~------~~~~ 111 (443)
T 2xmo_A 40 LSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESK--KTDVLIISGDLTNNGE------KTSH 111 (443)
T ss_dssp EEEEEECCCCBCCGGGBCCCHHHHHHHHTSTTCCGGGHHHHHHHHHHHHHHH--TCSEEEEESCCBSSCC------HHHH
T ss_pred eEEEEEeCCCCCCccccccchhhhcccccccccccccHHHHHHHHHHHHHHc--CCCEEEECCCCCCCCC------HHHH
Confidence 468999999998542 245566666655432 4789999999986421 1223
Q ss_pred HHHHHHHHHHHhcCCCccccceEEEecCCCCCCC
Q 014802 342 RLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 342 ~~~f~~La~~l~~~p~l~~~~~~v~vPG~~Dp~~ 375 (418)
.. +.+.|..+. ...+++++||||||...
T Consensus 112 ~~----~~~~l~~l~--~~~~~~~~v~GNHD~~~ 139 (443)
T 2xmo_A 112 EE----LAKKLTQVE--KNGTQVFVVPGNHDINN 139 (443)
T ss_dssp HH----HHHHHHHHH--HTTCEEEEECCTTTSSC
T ss_pred HH----HHHHHHHHH--hCCCeEEEECCcCCCCC
Confidence 22 222222210 01368999999999854
No 18
>1su1_A Hypothetical protein YFCE; structural genomics, phosphoesterase, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.25A {Escherichia coli} SCOP: d.159.1.7
Probab=96.53 E-value=0.0023 Score=58.51 Aligned_cols=74 Identities=19% Similarity=0.234 Sum_probs=43.8
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCC-CCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH-PCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~-~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
+++++||+|.+- +.|+++++.+... .|..+|++||+++. +.......+ ..++ +.+.|.+.+ .+
T Consensus 27 ki~~iSD~H~~~----~~l~~~l~~~~~~--~~d~vi~~GDl~~~g~~~~~~~~~-~~~~----~~~~l~~~~-----~~ 90 (208)
T 1su1_A 27 KLMFASDIHGSL----PATERVLELFAQS--GAQWLVILGDVLNHGPRNALPEGY-APAK----VVERLNEVA-----HK 90 (208)
T ss_dssp EEEEECCCTTBH----HHHHHHHHHHHHH--TCSEEEECSCCSCCCTTSCCCTTB-CHHH----HHHHHHTTG-----GG
T ss_pred EEEEEEcCCCCH----HHHHHHHHHHHhc--CCCEEEECCCccccCccccccccc-CHHH----HHHHHHhcC-----Cc
Confidence 588999999752 4455555554322 47899999999874 211000000 0122 333444322 48
Q ss_pred EEEecCCCCCC
Q 014802 364 FLFIPGPDDAG 374 (418)
Q Consensus 364 ~v~vPG~~Dp~ 374 (418)
+++|+||||..
T Consensus 91 v~~V~GNHD~~ 101 (208)
T 1su1_A 91 VIAVRGNCDSE 101 (208)
T ss_dssp EEECCCTTCCH
T ss_pred eEEEECCCchH
Confidence 99999999974
No 19
>2a22_A Vacuolar protein sorting 29; alpha-beta-BETA-alpha sandwich, structural genomics, structural genomics consortium, SGC, protein transport; 2.20A {Cryptosporidium parvum} SCOP: d.159.1.7
Probab=96.31 E-value=0.0034 Score=57.56 Aligned_cols=64 Identities=14% Similarity=0.261 Sum_probs=41.2
Q ss_pred cEEEEEccccCcHH--HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 285 MFVILSDIWLDNEE--VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 285 ~~v~lSDv~ld~~~--~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+++++||+|++... ..+.|.+++.. ..+..+|++||+++ .+.++.|.++ ..
T Consensus 27 ~i~~iSD~H~~~~~~~l~~~l~~~~~~-----~~~D~vi~~GDl~~-------------~~~l~~l~~~---------~~ 79 (215)
T 2a22_A 27 LVLLIGDLKIPYGAKELPSNFRELLAT-----DKINYVLCTGNVCS-------------QEYVEMLKNI---------TK 79 (215)
T ss_dssp EEEEECCCCTTTTCSSCCGGGHHHHHC-----TTCCEEEECSCCCC-------------HHHHHHHHHH---------CS
T ss_pred EEEEEecCCCCCChHHHHHHHHHHHhc-----CCCCEEEECCCCCC-------------HHHHHHHHHc---------CC
Confidence 58899999997532 22444444431 24789999999984 1223333321 13
Q ss_pred eEEEecCCCCCCC
Q 014802 363 RFLFIPGPDDAGP 375 (418)
Q Consensus 363 ~~v~vPG~~Dp~~ 375 (418)
++++|+||||...
T Consensus 80 ~v~~V~GNHD~~~ 92 (215)
T 2a22_A 80 NVYIVSGDLDSAI 92 (215)
T ss_dssp CEEECCCTTCCSC
T ss_pred CEEEecCCCcCcc
Confidence 7999999999754
No 20
>1s3l_A Hypothetical protein MJ0936; phosphodiesterase, nuclease, structural genomics, BSGC struc funded by NIH; 2.40A {Methanocaldococcus jannaschii} SCOP: d.159.1.7 PDB: 1s3m_A 1s3n_A 2ahd_A
Probab=96.26 E-value=0.0061 Score=54.89 Aligned_cols=64 Identities=17% Similarity=0.250 Sum_probs=41.7
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
-+++++||+| ++. +.|+++++.+... .|..+|++||+++. +.+ +.|.+ + ..+
T Consensus 26 m~i~~iSD~H-g~~---~~l~~~l~~~~~~--~~D~ii~~GDl~~~-------------~~~----~~l~~---l--~~~ 77 (190)
T 1s3l_A 26 MKIGIMSDTH-DHL---PNIRKAIEIFNDE--NVETVIHCGDFVSL-------------FVI----KEFEN---L--NAN 77 (190)
T ss_dssp CEEEEECCCT-TCH---HHHHHHHHHHHHS--CCSEEEECSCCCST-------------HHH----HHGGG---C--SSE
T ss_pred eEEEEEeeCC-CCH---HHHHHHHHHHhhc--CCCEEEECCCCCCH-------------HHH----HHHHh---c--CCC
Confidence 3588999999 443 4455555554322 47899999999741 112 22332 2 358
Q ss_pred EEEecCCCCCCC
Q 014802 364 FLFIPGPDDAGP 375 (418)
Q Consensus 364 ~v~vPG~~Dp~~ 375 (418)
+++||||||...
T Consensus 78 ~~~V~GNhD~~~ 89 (190)
T 1s3l_A 78 IIATYGNNDGER 89 (190)
T ss_dssp EEEECCTTCCCH
T ss_pred EEEEeCCCcchH
Confidence 999999999754
No 21
>1z2w_A Vacuolar protein sorting 29; VPS29, retromer, phosphatase, manganese, protein transport; 2.00A {Mus musculus} SCOP: d.159.1.7 PDB: 1z2x_A 3lh6_A 3lh7_A 3psn_A 3pso_A 1w24_A 2r17_A
Probab=96.20 E-value=0.0038 Score=56.03 Aligned_cols=64 Identities=16% Similarity=0.324 Sum_probs=40.1
Q ss_pred cEEEEEccccCcH--HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 285 MFVILSDIWLDNE--EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 285 ~~v~lSDv~ld~~--~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+++++||+|++.. ...+.|.+++. . ..|..+|++||+++ .+.++.|.++ ..
T Consensus 12 ~i~~iSD~H~~~~~~~~~~~l~~~~~---~--~~~d~ii~~GDl~~-------------~~~~~~l~~~---------~~ 64 (192)
T 1z2w_A 12 LVLVLGDLHIPHRCNSLPAKFKKLLV---P--GKIQHILCTGNLCT-------------KESYDYLKTL---------AG 64 (192)
T ss_dssp EEEEECCCCBTTTCSSCCHHHHTTCC---T--TSCSEEEECSCCBS-------------HHHHHHHHHH---------CS
T ss_pred EEEEEecCCCCccchhHHHHHHHHhc---c--CCCCEEEEcCCCCC-------------HHHHHHHHhc---------CC
Confidence 5889999998642 22233433322 1 25789999999974 1223333321 13
Q ss_pred eEEEecCCCCCCC
Q 014802 363 RFLFIPGPDDAGP 375 (418)
Q Consensus 363 ~~v~vPG~~Dp~~ 375 (418)
++++|+||||...
T Consensus 65 ~~~~v~GNhD~~~ 77 (192)
T 1z2w_A 65 DVHIVRGDFDENL 77 (192)
T ss_dssp EEEECCCTTCCCT
T ss_pred CEEEEcCCcCccc
Confidence 7999999999753
No 22
>1nnw_A Hypothetical protein; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics, secsg; 1.90A {Pyrococcus furiosus} SCOP: d.159.1.5 PDB: 2gju_A
Probab=96.08 E-value=0.0094 Score=55.23 Aligned_cols=71 Identities=14% Similarity=0.076 Sum_probs=41.5
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhccc---CCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCcccc
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFE---SVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEH 361 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~---~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~ 361 (418)
+++++||+|.+- ..|+.+++... .....|..+|++||+++..- . .. +.++.|.++.. .
T Consensus 3 ~i~~isD~H~~~----~~l~~~l~~~~~~~~~~~~~d~ii~~GD~~~~g~----~-~~---~~~~~l~~l~~-------~ 63 (252)
T 1nnw_A 3 YVAVLANIAGNL----PALTAALSRIEEMREEGYEIEKYYILGNIVGLFP----Y-PK---EVIEVIKDLTK-------K 63 (252)
T ss_dssp EEEEEECCTTCH----HHHHHHHHHHHHHHHTTCCEEEEEEESCSSSSSS----C-HH---HHHHHHHHHHH-------H
T ss_pred EEEEEeecCCCH----HHHHHHHHHHHhhhhccCCCCEEEEeCccCCCCC----C-HH---HHHHHHHhhHh-------h
Confidence 478899999653 33444544443 21113789999999986421 1 11 22233333221 1
Q ss_pred ceEEEecCCCCCC
Q 014802 362 SRFLFIPGPDDAG 374 (418)
Q Consensus 362 ~~~v~vPG~~Dp~ 374 (418)
..+++||||||..
T Consensus 64 ~~~~~v~GNhD~~ 76 (252)
T 1nnw_A 64 ENVKIIRGKYDQI 76 (252)
T ss_dssp SCEEEECCHHHHH
T ss_pred cCeeEEecchHHH
Confidence 3689999999963
No 23
>1ute_A Protein (II purple acid phosphatase); tartrate resistant acid phosphatase metalloenzyme, uteroferrin, hydrolase; HET: NAG; 1.55A {Sus scrofa} SCOP: d.159.1.1 PDB: 1war_A* 2bq8_X 1qfc_A* 1qhw_A*
Probab=95.71 E-value=0.0066 Score=57.34 Aligned_cols=81 Identities=11% Similarity=0.120 Sum_probs=45.7
Q ss_pred CcEEEEEccccCcH---------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhc
Q 014802 284 DMFVILSDIWLDNE---------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAA 354 (418)
Q Consensus 284 ~~~v~lSDv~ld~~---------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~ 354 (418)
-+|+++||+|++.. .+.+.+..+... ..|..+|++||++...+..+... .++.+.|+ .++..
T Consensus 7 ~~~~~isD~h~~~~~~~~~~~~~~~~~~l~~~~~~-----~~~d~vv~~GD~~~~~g~~~~~~-~~~~~~~~---~~~~~ 77 (313)
T 1ute_A 7 LRFVAVGDWGGVPNAPFHTAREMANAKAIATTVKT-----LGADFILSLGDNFYFTGVHDAKD-KRFQETFE---DVFSD 77 (313)
T ss_dssp EEEEEECSCCCCSSTTSSCHHHHHHHHHHHHHHHH-----HCCSEEEECSCCSTTTCCSSTTC-THHHHHTT---TTSCS
T ss_pred eEEEEEcccCCCCCccccCchHHHHHHHHHHHHHh-----cCCCEEEECCCccCcCCCCCcch-HHHHHHHH---HHcCc
Confidence 46899999999852 233344433332 15889999999875432111111 22322222 22221
Q ss_pred CCCccccceEEEecCCCCCCC
Q 014802 355 HPRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 355 ~p~l~~~~~~v~vPG~~Dp~~ 375 (418)
+.+ +.+++++||||||-..
T Consensus 78 -~~l-~~~p~~~v~GNHD~~~ 96 (313)
T 1ute_A 78 -PSL-RNVPWHVLAGNHDHLG 96 (313)
T ss_dssp -GGG-TTCCEEECCCHHHHHS
T ss_pred -hhh-cCCCEEEECCCCccCC
Confidence 112 2579999999999743
No 24
>3rl5_A Metallophosphoesterase mpped2; alpha-beta fold, metallophosphodiesterase, active site mutan nucleotide polymorphism, hydrolase; 1.26A {Rattus norvegicus} PDB: 3rl3_A* 3rl4_A*
Probab=95.53 E-value=0.02 Score=55.48 Aligned_cols=64 Identities=17% Similarity=0.266 Sum_probs=42.5
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceE
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRF 364 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~ 364 (418)
+|+++||+|...... .. ..+..+|++||+++.. ...+++ .+.+.|++.+ ...+
T Consensus 61 ri~~iSD~H~~~~~l---------~i----~~~D~vi~aGDl~~~g------~~~e~~----~~~~~L~~l~----~~~v 113 (296)
T 3rl5_A 61 RFVCISDTRSRTDGI---------QM----PYGDILLHTGDFTELG------LPSEVK----KFNDWLGNLP----YEYK 113 (296)
T ss_dssp EEEEEBCCTTCCTTC---------CC----CSCSEEEECSCCSSSC------CHHHHH----HHHHHHHTSC----CSEE
T ss_pred EEEEEeeCCCCcchh---------cc----CCCCEEEECCcccCCC------CHHHHH----HHHHHHHhCC----CCeE
Confidence 699999999876421 11 2478999999998642 123333 3445555543 2468
Q ss_pred EEecCCCCCCC
Q 014802 365 LFIPGPDDAGP 375 (418)
Q Consensus 365 v~vPG~~Dp~~ 375 (418)
++||||||.+.
T Consensus 114 ~~V~GNHD~~~ 124 (296)
T 3rl5_A 114 IVIAGNHELTF 124 (296)
T ss_dssp EECCCTTCGGG
T ss_pred EEEcCCccccc
Confidence 99999999864
No 25
>3qfm_A SAPH, putative uncharacterized protein; sandwich fold, asymmetric AP4A hydrolase, phosphodiesterase, binding, Mn2+ binding, hydrolase; 1.90A {Streptococcus pneumoniae} PDB: 3qfn_A 3qfo_A*
Probab=95.41 E-value=0.014 Score=55.53 Aligned_cols=66 Identities=17% Similarity=0.161 Sum_probs=43.5
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCC-CCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH-PCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~-~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
.+++++||+|-+ +.+|+.+++..... .|..+|++||+++. +. . .+ ..+.|.+. .
T Consensus 12 ~~i~~iSDiHg~----~~~l~~vl~~~~~~--~~D~ii~~GDlv~~g~~-----~----~~----~~~~l~~~------~ 66 (270)
T 3qfm_A 12 TKIALLSDIHGN----TTALEAVLADARQL--GVDEYWLLGDILMPGTG-----R----RR----ILDLLDQL------P 66 (270)
T ss_dssp EEEEEECCCTTC----HHHHHHHHHHHHHT--TCCEEEECSCCSSSSSC-----S----HH----HHHHHHTS------C
T ss_pred cEEEEEecCCCC----HHHHHHHHHHHHhc--CCCEEEEcCCCCCCCCC-----H----HH----HHHHHHcc------C
Confidence 579999999943 35566666665432 47899999999974 21 1 12 22334332 2
Q ss_pred eEEEecCCCCCC
Q 014802 363 RFLFIPGPDDAG 374 (418)
Q Consensus 363 ~~v~vPG~~Dp~ 374 (418)
.+++|+||||-.
T Consensus 67 ~~~~v~GNhD~~ 78 (270)
T 3qfm_A 67 ITARVLGNWEDS 78 (270)
T ss_dssp EEEECCCHHHHH
T ss_pred CEEEEcCChHHH
Confidence 588999999963
No 26
>2kkn_A Uncharacterized protein; protein phosphatase 2A homologue, structural genomics, PSI- 2, protein structure initiative; NMR {Thermotoga maritima}
Probab=95.38 E-value=0.0071 Score=53.91 Aligned_cols=63 Identities=16% Similarity=0.116 Sum_probs=38.3
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceE
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRF 364 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~ 364 (418)
+++++||+|.... .++|..++..+.. .|..+|++||+++. +.++.|.++ ..++
T Consensus 24 ri~~iSD~Hg~~~--~~~l~~~l~~~~~---~~D~ii~~GD~~~~-------------~~~~~l~~~---------~~~v 76 (178)
T 2kkn_A 24 RFLLISDSHVPVR--MASLPDEILNSLK---EYDGVIGLGDYVDL-------------DTVILLEKF---------SKEF 76 (178)
T ss_dssp EEEEECCCCBTTT--TCCCCHHHHHGGG---GCSEEEESSCBSCH-------------HHHHHHHHH---------TSSE
T ss_pred EEEEEecccCCCC--HHHHHHHHHHHhc---CCCEEEECCCCCCH-------------HHHHHHHhc---------CCCE
Confidence 4888999995211 1233334443321 47899999999751 222323321 1479
Q ss_pred EEecCCCCCC
Q 014802 365 LFIPGPDDAG 374 (418)
Q Consensus 365 v~vPG~~Dp~ 374 (418)
++|+||||..
T Consensus 77 ~~V~GNhD~~ 86 (178)
T 2kkn_A 77 YGVHGNMDYP 86 (178)
T ss_dssp EECCCSSSCG
T ss_pred EEEECCCCcH
Confidence 9999999973
No 27
>1sr3_A APO-CCME; OB fold, beta barrel, flexible C-terminal domain, chaperone; NMR {Escherichia coli} SCOP: b.40.9.1
Probab=95.21 E-value=0.045 Score=46.82 Aligned_cols=62 Identities=23% Similarity=0.288 Sum_probs=49.8
Q ss_pred CcEE-EEEEEEEc-----cCC---cEEEeeCCcEEEEEeccccccceeeccCcEEEEEEEEeeCCeEEEEEec
Q 014802 178 GRRW-VMGVISQL-----EDG---HFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241 (418)
Q Consensus 178 g~~~-vlGml~~~-----~~g---~~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~G~F~V~~i~ 241 (418)
|+.+ |-||+... +++ .|.|.|....|++.-.+.. ..+|.+|.-|+|+|.+..+|+|.+++|.
T Consensus 28 g~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~v~V~Y~Gil--PDlFrEGqgVVa~G~l~~~g~F~A~eVL 98 (136)
T 1sr3_A 28 GQRLRVGGMVMPGSVQRDPNSLKVTFTIYDAEGSVDVSYEGIL--PDLFREGQGVVVQGELEKGNHILAKEVL 98 (136)
T ss_dssp TSEEEEEEEECTTTCEECSSSSEEEEEEECSSCEEEEEEESCC--CTTCCTTSEEEEEEEECSSSEEEESSCB
T ss_pred CCEEEEeeEEeCCcEEEcCCCCEEEEEEEeCCcEEEEEECCCC--CccccCCCeEEEEEEECCCCeEEEEEEE
Confidence 5565 99998752 233 4789999889999877654 5789999999999999778999999865
No 28
>3rqz_A Metallophosphoesterase; PSI-biology, midwest center for structural genomics, MCSG, Zn binding, hydrolase; 1.95A {Sphaerobacter thermophilus} SCOP: d.159.1.0
Probab=94.57 E-value=0.018 Score=53.53 Aligned_cols=66 Identities=18% Similarity=0.079 Sum_probs=40.9
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
-+++++||+| ++. ..|+.++..+. .|..+|++||+++..- . . .+.++.|..+ + .
T Consensus 4 mri~~isDiH-g~~---~~l~~~l~~~~----~~d~ii~~GDl~~~g~----~-~---~~~~~~l~~~----~------~ 57 (246)
T 3rqz_A 4 MRILIISDVH-ANL---VALEAVLSDAG----RVDDIWSLGDIVGYGP----R-P---RECVELVRVL----A------P 57 (246)
T ss_dssp CCEEEECCCT-TCH---HHHHHHHHHHC----SCSEEEECSCCSSSSS----C-H---HHHHHHHHHH----C------S
T ss_pred cEEEEEeecC-CCH---HHHHHHHHhcc----CCCEEEECCCcCCCCC----C-H---HHHHHHHHhc----C------C
Confidence 3589999999 433 44555665553 4789999999986421 1 1 1222223221 1 2
Q ss_pred EEEecCCCCCCC
Q 014802 364 FLFIPGPDDAGP 375 (418)
Q Consensus 364 ~v~vPG~~Dp~~ 375 (418)
+++|+||||-..
T Consensus 58 ~~~v~GNhD~~~ 69 (246)
T 3rqz_A 58 NISVIGNHDWAC 69 (246)
T ss_dssp SEECCCHHHHHH
T ss_pred CEEEeCchHHHH
Confidence 689999999743
No 29
>1j6q_A Cytochrome C maturation protein E; all-beta protein, heme delivery,cytochrome C maturation, OB- (oligonucleotide binding)fold; NMR {Shewanella putrefaciens} SCOP: b.40.9.1 PDB: 1lm0_A
Probab=94.57 E-value=0.11 Score=44.30 Aligned_cols=62 Identities=23% Similarity=0.353 Sum_probs=49.2
Q ss_pred CcEE-EEEEEEEc-----cCC---cEEEee-CCcEEEEEeccccccceeeccCcEEEEEEEEeeCCeEEEEEec
Q 014802 178 GRRW-VMGVISQL-----EDG---HFYLED-LAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITCG 241 (418)
Q Consensus 178 g~~~-vlGml~~~-----~~g---~~~LED-~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~G~F~V~~i~ 241 (418)
|+.+ |-||+... .++ .|.|.| ....|++.-.+.. ..+|.+|.-|+|+|.+..+|+|++++|.
T Consensus 32 g~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~v~V~Y~Gil--PDlFrEGqgVVa~G~l~~~g~F~A~eVL 103 (136)
T 1j6q_A 32 GQRIRVGGMVTVGSMVRDPNSLHVQFAVHDSLGGEILVTYDDLL--PDLFREGQGIVAQGVLGEDGKLAATEVL 103 (136)
T ss_dssp TCEEEEEEEECTTCCEECTTSSCEEEEEECTTCCCEEEEECSCC--TTSCCSSSEEEEEEEECSTTSEEEEEEE
T ss_pred CCEEEEeEEEeCCcEEecCCCCEEEEEEEcCCCCEEEEEECCCC--CccccCCCeEEEEEEECCCCeEEEEEEE
Confidence 4565 99999541 233 588999 7778999877654 5689999999999999779999999975
No 30
>2kct_A Cytochrome C-type biogenesis protein CCME; solution structure, heme chaperone, cytochrome C biogenesis, OB-fold domain, NESG, PSI-2; NMR {Desulfovibrio vulgaris str}
Probab=94.25 E-value=0.1 Score=41.83 Aligned_cols=62 Identities=21% Similarity=0.249 Sum_probs=48.5
Q ss_pred CcEE-EEEEEEEc-----cCC---cEEEeeC---CcEEEEEeccccccceeeccCcEEEEEEEEee-CCeEEEEEec
Q 014802 178 GRRW-VMGVISQL-----EDG---HFYLEDL---AASVEIDLSKAKITTGFFTENTIVVAEGEMLV-DGIFQVITCG 241 (418)
Q Consensus 178 g~~~-vlGml~~~-----~~g---~~~LED~---tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~~-~G~F~V~~i~ 241 (418)
++.+ |-||+..- +++ .|.|.|. ..+|++...+.. ..+|.+|.=|+|+|.+.. +|+|.+++|.
T Consensus 8 ~~~iRvgG~V~~GSv~r~~~~~~v~F~vtD~~~~~~~v~V~Y~Gil--PDlFrEGqgVV~~G~l~~~~g~F~A~evL 82 (94)
T 2kct_A 8 LHTVRLFGTVAADGLTMLDGAPGVRFRLEDKDNTSKTVWVLYKGAV--PDTFKPGVEVIIEGGLAPGEDTFKARTLM 82 (94)
T ss_dssp TCCEEEEEEECSTTCEECTTSSEEEEEEECSSCTTCEEEEEEESCC--CTTCCTTCEEEEEEEECTTCSEEEEEEEE
T ss_pred CCeEEEeeEEeCCeEEecCCCCEEEEEEEcCCCCCcEEEEEECCCC--CccccCCCeEEEEEEEeCCCCEEEEeEEE
Confidence 4444 89998652 223 4789998 789999877654 568999999999999976 8999999874
No 31
>2qjc_A Diadenosine tetraphosphatase, putative; putative diadenosine tetraphosphatase, monomer, PSI- 2, protein structure initiative, nysgrc; 2.05A {Trypanosoma brucei}
Probab=94.14 E-value=0.038 Score=52.19 Aligned_cols=66 Identities=21% Similarity=0.207 Sum_probs=42.3
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCC-eEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCcccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVP-SLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEH 361 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p-~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~ 361 (418)
..+++++||+| ++. +.|..+++.+... .+ ..+|++||+++..- .+. +.++.|. +
T Consensus 18 ~~~i~visDiH-g~~---~~l~~~l~~~~~~--~~~d~ii~~GD~vd~g~----~~~----~~l~~l~----~------- 72 (262)
T 2qjc_A 18 TGRVIIVGDIH-GCR---AQLEDLLRAVSFK--QGSDTLVAVGDLVNKGP----DSF----GVVRLLK----R------- 72 (262)
T ss_dssp CSCEEEECCCT-TCH---HHHHHHHHHHTCC--TTTSEEEECSCCSSSSS----CHH----HHHHHHH----H-------
T ss_pred CCeEEEEeCCC-CCH---HHHHHHHHHHhcc--CCCCEEEEecCCCCCCC----CHH----HHHHHHH----H-------
Confidence 45799999999 443 5566666665432 33 79999999997521 111 2222221 1
Q ss_pred ceEEEecCCCCC
Q 014802 362 SRFLFIPGPDDA 373 (418)
Q Consensus 362 ~~~v~vPG~~Dp 373 (418)
..+++|+||||.
T Consensus 73 ~~~~~v~GNHd~ 84 (262)
T 2qjc_A 73 LGAYSVLGNHDA 84 (262)
T ss_dssp HTCEECCCHHHH
T ss_pred CCCEEEeCcChH
Confidence 268999999996
No 32
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C*
Probab=94.12 E-value=0.1 Score=50.80 Aligned_cols=73 Identities=12% Similarity=0.128 Sum_probs=46.4
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+..++++||+| ++- ..|..+|...... ++..+|++||+++..- .+. +.++.|..+-..+|.
T Consensus 49 ~~~i~viGDIH-G~~---~~L~~ll~~~~~~--~~~~~vflGD~VDRG~----~s~----evl~lL~~lk~~~p~----- 109 (309)
T 2ie4_C 49 RCPVTVCGDVH-GQF---HDLMELFRIGGKS--PDTNYLFMGDYVDRGY----YSV----ETVTLLVALKVRYRE----- 109 (309)
T ss_dssp CSSEEEECCCT-TCH---HHHHHHHHHHCCT--TTSCEEECSCCSSSST----THH----HHHHHHHHHHHHCTT-----
T ss_pred cCCEEEEecCC-CCH---HHHHHHHHHcCCC--CCCEEEEeCCccCCCC----ChH----HHHHHHHHHHhhCCC-----
Confidence 45799999999 554 4555666544321 3467899999998621 221 233444444334553
Q ss_pred eEEEecCCCCCC
Q 014802 363 RFLFIPGPDDAG 374 (418)
Q Consensus 363 ~~v~vPG~~Dp~ 374 (418)
.++++.||||-.
T Consensus 110 ~v~~lrGNHE~~ 121 (309)
T 2ie4_C 110 RITILRGNHESR 121 (309)
T ss_dssp TEEECCCTTSST
T ss_pred cEEEEeCCCCHH
Confidence 799999999974
No 33
>1g5b_A Serine/threonine protein phosphatase; bacteriophage lambda, Ser/Thr protein phosphatase, ppase, manganese, sulfate, viral protein; 2.15A {Enterobacteria phage lambda} SCOP: d.159.1.3
Probab=93.97 E-value=0.049 Score=49.60 Aligned_cols=67 Identities=13% Similarity=0.181 Sum_probs=41.4
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
..+++++||+| ++ .+.|..+++.+... ..+..+|++||+++..- .+. +.++ .|. ..
T Consensus 12 ~~~i~visDiH-g~---~~~l~~~l~~~~~~-~~~d~~i~~GD~~~~g~----~~~----~~~~----~l~-------~~ 67 (221)
T 1g5b_A 12 YRNIWVVGDLH-GC---YTNLMNKLDTIGFD-NKKDLLISVGDLVDRGA----ENV----ECLE----LIT-------FP 67 (221)
T ss_dssp CSCEEEECCCT-TC---HHHHHHHHHHHTCC-TTTCEEEECSCCSSSSS----CHH----HHHG----GGG-------ST
T ss_pred CceEEEEEcCC-CC---HHHHHHHHHHccCC-CCCCEEEEeCCccCCCC----ChH----HHHH----HHh-------cC
Confidence 35689999999 43 34555566654321 13679999999997521 111 1111 122 24
Q ss_pred eEEEecCCCCC
Q 014802 363 RFLFIPGPDDA 373 (418)
Q Consensus 363 ~~v~vPG~~Dp 373 (418)
.+++|+||||-
T Consensus 68 ~~~~v~GNhd~ 78 (221)
T 1g5b_A 68 WFRAVRGNHEQ 78 (221)
T ss_dssp TEEECCCHHHH
T ss_pred CEEEEccCcHH
Confidence 79999999995
No 34
>3ck2_A Conserved uncharacterized protein (predicted phosphoesterase COG0622); structural genomics, predicted phosphodiesterase, PSI-2; HET: SRT; 2.30A {Streptococcus pneumoniae} SCOP: d.159.1.7
Probab=93.86 E-value=0.086 Score=46.21 Aligned_cols=58 Identities=17% Similarity=0.055 Sum_probs=37.8
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceE
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRF 364 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~ 364 (418)
+++++||+|- + .+.|+.+++.+.. .+..+|++||+.. + .|. .+.. .+
T Consensus 8 ~i~~isD~H~-~---~~~~~~~~~~~~~---~~d~i~~~GD~~~-~--------------------~l~---~l~~--~~ 54 (176)
T 3ck2_A 8 TIIVMSDSHG-D---SLIVEEVRDRYVG---KVDAVFHNGDSEL-R--------------------PDS---PLWE--GI 54 (176)
T ss_dssp EEEEECCCTT-C---HHHHHHHHHHHTT---TSSEEEECSCCCS-C--------------------TTC---GGGT--TE
T ss_pred EEEEEecCCC-C---HHHHHHHHHHhhc---CCCEEEECCCCch-H--------------------HHH---hhhC--Ce
Confidence 4888999994 3 3455666665543 4789999999621 0 011 1212 79
Q ss_pred EEecCCCCCCC
Q 014802 365 LFIPGPDDAGP 375 (418)
Q Consensus 365 v~vPG~~Dp~~ 375 (418)
++|+||||...
T Consensus 55 ~~v~GNhD~~~ 65 (176)
T 3ck2_A 55 RVVKGNMDFYA 65 (176)
T ss_dssp EECCCTTCCST
T ss_pred EEecCcccchh
Confidence 99999999653
No 35
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A}
Probab=92.67 E-value=0.11 Score=49.64 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=41.9
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceE
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRF 364 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~ 364 (418)
+++++||+|- + +..|..+|...... ..+..+|++||+++.- ..+. +.++ +|.+.| ..+
T Consensus 2 ~i~vigDiHG-~---~~~l~~ll~~~~~~-~~~d~~v~lGD~vdrG----~~s~----~~l~----~l~~l~-----~~~ 59 (280)
T 2dfj_A 2 ATYLIGDVHG-C---YDELIALLHKVEFT-PGKDTLWLTGDLVARG----PGSL----DVLR----YVKSLG-----DSV 59 (280)
T ss_dssp CEEEECCCCS-C---HHHHHHHHHHTTCC-TTTCEEEECSCCSSSS----SCHH----HHHH----HHHHTG-----GGE
T ss_pred eEEEEecCCC-C---HHHHHHHHHHhCCC-CCCCEEEEeCCcCCCC----CccH----HHHH----HHHhCC-----Cce
Confidence 4788999994 3 35566677655321 1357999999999752 1111 2222 222222 279
Q ss_pred EEecCCCCC
Q 014802 365 LFIPGPDDA 373 (418)
Q Consensus 365 v~vPG~~Dp 373 (418)
++|.||||-
T Consensus 60 ~~v~GNHe~ 68 (280)
T 2dfj_A 60 RLVLGNHDL 68 (280)
T ss_dssp EECCCHHHH
T ss_pred EEEECCCcH
Confidence 999999995
No 36
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3
Probab=92.31 E-value=0.24 Score=48.55 Aligned_cols=72 Identities=17% Similarity=0.197 Sum_probs=44.8
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+..++++||+| |+- ..|..+|...... +...+|++||+|+.- ..+. +.++-|-.+-..+| .
T Consensus 56 ~~~i~viGDIH-G~~---~~L~~ll~~~g~~--~~~~~vflGD~VDRG----~~s~----evl~lL~~lk~~~p-----~ 116 (330)
T 1fjm_A 56 EAPLKICGDIH-GQY---YDLLRLFEYGGFP--PESNYLFLGDYVDRG----KQSL----ETICLLLAYKIKYP-----E 116 (330)
T ss_dssp CSSEEEECBCT-TCH---HHHHHHHHHHCST--TSSCEEECSCCSSSS----SCHH----HHHHHHHHHHHHST-----T
T ss_pred cCceEEecCCC-CCH---HHHHHHHHHhCCC--CcceEEeCCCcCCCC----CChH----HHHHHHHHhhhhcC-----C
Confidence 45799999999 443 5555666554321 345799999999862 1222 22333333222345 3
Q ss_pred eEEEecCCCCC
Q 014802 363 RFLFIPGPDDA 373 (418)
Q Consensus 363 ~~v~vPG~~Dp 373 (418)
.++++.||||-
T Consensus 117 ~v~~lrGNHE~ 127 (330)
T 1fjm_A 117 NFFLLRGNHEC 127 (330)
T ss_dssp TEEECCCTTSS
T ss_pred ceEEecCCchH
Confidence 79999999996
No 37
>2k50_A Replication factor A related protein; uncharacterized protein, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=91.40 E-value=1 Score=36.57 Aligned_cols=63 Identities=17% Similarity=0.237 Sum_probs=44.6
Q ss_pred ccceecccccCCCCcE-EEEEEEEEc--------cCC---c---EEEeeCCcEEEEEeccccc-cceeeccCcEEEEEEE
Q 014802 165 CEISTIQSLVGQTGRR-WVMGVISQL--------EDG---H---FYLEDLAASVEIDLSKAKI-TTGFFTENTIVVAEGE 228 (418)
Q Consensus 165 ~~it~I~~Llg~~g~~-~vlGml~~~--------~~g---~---~~LED~tG~I~Ldls~~~~-~~g~~~~g~vV~veG~ 228 (418)
+.+++|+.|- .|+. .++|++... ..| . +.|.|.||+|.+.+=+... ....+.+|.+|.+.|.
T Consensus 5 ~~~~~I~~L~--~g~~v~i~~~V~~~~~~~~~~~k~G~~~~~~~~~l~D~TG~I~~t~w~~~~~~~~~l~~G~vv~i~g~ 82 (115)
T 2k50_A 5 HRMDTISKLE--EGAETPVTGRVMKISSPRTFTTRKGREGKLANVIIADDTGELRAVFWTENIKLLKKFREGDVIRIKDV 82 (115)
T ss_dssp TCCCCTTTCC--TTCEEEEEEEEEEECCCEECCCTTSSCCEEEEEEEEETTEEEEEEEETTGGGGGGTCCTTSEEEEEEE
T ss_pred cceEEHHHCC--CCCEeEEEEEEEECCCceEEEcCCCCEEEEEEEEEEeCCCeEEEEEeCchhhhhhcCCCCCEEEEEee
Confidence 4577888883 5554 588888875 234 3 4489999999987654321 1246789999999999
Q ss_pred E
Q 014802 229 M 229 (418)
Q Consensus 229 ~ 229 (418)
+
T Consensus 83 ~ 83 (115)
T 2k50_A 83 N 83 (115)
T ss_dssp E
T ss_pred E
Confidence 8
No 38
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=91.23 E-value=0.46 Score=48.36 Aligned_cols=72 Identities=14% Similarity=0.186 Sum_probs=43.8
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
.+++++||+| ++ +..|..+|...... .....+|++||+++... .+. +.++.|-.+-..+| ..
T Consensus 213 ~~~~vigDiH-G~---~~~l~~~l~~~~~~-~~~~~~v~lGD~vdrG~----~s~----e~~~~l~~l~~~~~-----~~ 274 (477)
T 1wao_1 213 EKITVCGDTH-GQ---FYDLLNIFELNGLP-SETNPYIFNGDFVDRGS----FSV----EVILTLFGFKLLYP-----DH 274 (477)
T ss_dssp CEEEEECBCT-TC---HHHHHHHHHHHCCC-BTTBCEEEESCCSSSST----THH----HHHHHHHHHHHHST-----TT
T ss_pred cceEEEeCCC-CC---HHHHHHHHHHcCCC-CCcCeEEEeccccCCCc----chH----HHHHHHHHHHhhCC-----Cc
Confidence 3488999999 44 45566666654321 01236999999998621 121 23333433333355 38
Q ss_pred EEEecCCCCC
Q 014802 364 FLFIPGPDDA 373 (418)
Q Consensus 364 ~v~vPG~~Dp 373 (418)
++++.||||.
T Consensus 275 ~~~lrGNHE~ 284 (477)
T 1wao_1 275 FHLLRGNHET 284 (477)
T ss_dssp EEEECCTTSS
T ss_pred eEeecCCccH
Confidence 9999999995
No 39
>1nnx_A Protein YGIW; structural genomics, hypothetical protein, OB-fold, structure 2 function project, S2F, unknown function; 1.45A {Escherichia coli} SCOP: b.40.10.1
Probab=91.07 E-value=1.3 Score=36.37 Aligned_cols=68 Identities=18% Similarity=0.263 Sum_probs=51.0
Q ss_pred cceecccccC-CCCc-EEEEEEEEEc-cCCcEEEeeCCcEEEEEeccccccceeeccCcEEEEEEEEeeCC
Q 014802 166 EISTIQSLVG-QTGR-RWVMGVISQL-EDGHFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEMLVDG 233 (418)
Q Consensus 166 ~it~I~~Llg-~~g~-~~vlGml~~~-~~g~~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~G 233 (418)
..++++..+. .++. +.+=|-|.+. .+.+|...|.||+|.++|.+.....--+.++.-|-+.|++..+.
T Consensus 24 ~~~TV~~a~~~~Dd~~V~L~G~Iv~~~~~d~Y~F~D~TG~I~VeId~~~w~g~~v~p~~~Vri~GevDkd~ 94 (109)
T 1nnx_A 24 SVTTVESAKSLRDDTWVTLRGNIVERISDDLYVFKDASGTINVDIDHKRWNGVTVTPKDTVEIQGEVDKDW 94 (109)
T ss_dssp CCCCHHHHTTSCSSEEEEEEEEEEEEEETTEEEEEETTEEEEEECCGGGSTTCCCCTTSCEEEEEEEEEET
T ss_pred ceEeHHHHhhCcCCCeEEEEEEEEEEeCCCeEEEECCCccEEEEEChhhcCCcccCCCCEEEEEEEECCCC
Confidence 3566666653 3444 4578999875 57889999999999999987765433668999999999986433
No 40
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A
Probab=90.82 E-value=0.49 Score=46.30 Aligned_cols=74 Identities=14% Similarity=0.084 Sum_probs=43.8
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhccc--CCC----CCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHh---
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFE--SVE----VVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIA--- 353 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~--~~~----~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~--- 353 (418)
..+++++||+| ++. ..|..+|.... ..+ ..+..+|++||+++.- ..+. +.++.|..+-.
T Consensus 70 ~~~i~vigDiH-G~~---~~l~~ll~~~~~~~~~~~~~~~~d~~v~lGD~vdrG----~~s~----evl~~l~~l~~~~~ 137 (342)
T 2z72_A 70 IKKVVALSDVH-GQY---DVLLTLLKKQKIIDSDGNWAFGEGHMVMTGDIFDRG----HQVN----EVLWFMYQLDQQAR 137 (342)
T ss_dssp CCEEEEECCCT-TCH---HHHHHHHHHTTSBCTTSCBCCTTCEEEECSCCSSSS----SCHH----HHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-CCH---HHHHHHHHhcCCCcccccccCCCCEEEEECCCcCCC----CCHH----HHHHHHHHHHHHHh
Confidence 45789999999 443 34555555422 110 1357999999999852 1121 22333333211
Q ss_pred cCCCccccceEEEecCCCCC
Q 014802 354 AHPRLKEHSRFLFIPGPDDA 373 (418)
Q Consensus 354 ~~p~l~~~~~~v~vPG~~Dp 373 (418)
.+| ..++++.||||-
T Consensus 138 ~~~-----~~v~~v~GNHE~ 152 (342)
T 2z72_A 138 DAG-----GMVHLLMGNHEQ 152 (342)
T ss_dssp HTT-----CEEEECCCHHHH
T ss_pred hCC-----CeEEEEecCCcH
Confidence 344 489999999996
No 41
>1xzw_A Purple acid phosphatase; hydrolase; HET: NAG FUC MAN; 2.50A {Ipomoea batatas} SCOP: b.1.12.1 d.159.1.1
Probab=90.15 E-value=0.21 Score=50.12 Aligned_cols=80 Identities=13% Similarity=0.152 Sum_probs=44.6
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
..+|+++||+|.+.. ....++.+.+. ...|..+|++||++....... .....+.+ +...+.. +....
T Consensus 126 ~~~f~~~gD~~~~~~-~~~~l~~i~~~----~~~~D~vl~~GD~~y~~~~~~-~~~~~~~~----~~~~l~~---l~~~~ 192 (426)
T 1xzw_A 126 PYVFGLIGDIGQTHD-SNTTLTHYEQN----SAKGQAVLFMGDLSYSNRWPN-HDNNRWDT----WGRFSER---SVAYQ 192 (426)
T ss_dssp CEEEEEECSCTTBHH-HHHHHHHHHHC----TTCCSEEEECSCCCCGGGSGG-GCTHHHHH----HHHHHHH---HHTTS
T ss_pred CeEEEEEEeCCCCCc-hHHHHHHHHhC----CCCCCEEEeCCChhhcccCCc-ccchHHHH----HHHHHHH---HHhcC
Confidence 357999999987632 22334433221 125889999999985322110 11122222 2222221 12357
Q ss_pred eEEEecCCCCCCC
Q 014802 363 RFLFIPGPDDAGP 375 (418)
Q Consensus 363 ~~v~vPG~~Dp~~ 375 (418)
+++.+|||||-..
T Consensus 193 P~~~v~GNHD~~~ 205 (426)
T 1xzw_A 193 PWIWTAGNHEIDY 205 (426)
T ss_dssp CEECCCCGGGCCC
T ss_pred CEEEecccccccc
Confidence 8999999999764
No 42
>3tgh_A Glideosome-associated protein 50; phosphatase fold, NOT A phosphatase, motor protein, structur protein, membrane protein; 1.70A {Plasmodium falciparum 3D7}
Probab=90.02 E-value=0.17 Score=49.79 Aligned_cols=84 Identities=12% Similarity=-0.011 Sum_probs=48.5
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
-+|+++||.+.+...-. +....+..+.+. ..|..+|+.||.+.. +..+. ....+++.|+.+-.-+ +....++
T Consensus 4 l~f~~igD~g~g~~~q~-~va~~m~~~~~~-~~pd~vl~~GD~~y~-G~~~~-~d~~~~~~f~~~~~~~----~~~~~~P 75 (342)
T 3tgh_A 4 LRFASLGDWGKDTKGQI-LNAKYFKQFIKN-ERVTFIVSPGSNFID-GVKGL-NDPAWKNLYEDVYSEE----KGDMYMP 75 (342)
T ss_dssp EEEEECCSCBSCCHHHH-HHHHHHHHHHHH-TTCCEEEECSCSBTT-CCCST-TCTHHHHHTTTTSCCG----GGTTCSE
T ss_pred EEEEEEecCCCCCchHH-HHHHHHHHHHhh-cCCCEEEECCCcccC-CCCcC-ccHHHHHHHHHHhhhh----hhhhCCC
Confidence 46889999998765322 222222222221 268999999998765 32111 1234555554432211 0124579
Q ss_pred EEEecCCCCCCC
Q 014802 364 FLFIPGPDDAGP 375 (418)
Q Consensus 364 ~v~vPG~~Dp~~ 375 (418)
+..||||||-..
T Consensus 76 ~~~vlGNHD~~~ 87 (342)
T 3tgh_A 76 FFTVLGTRDWTG 87 (342)
T ss_dssp EEECCCHHHHTS
T ss_pred EEEeCCCCccCC
Confidence 999999999764
No 43
>2qfp_A Purple acid phosphatase; binuclear, Fe-Zn, hydrolase; HET: NAG NDG; 2.20A {Phaseolus vulgaris} SCOP: b.1.12.1 d.159.1.1 PDB: 2qfr_A* 1kbp_A* 3kbp_A* 4kbp_A*
Probab=89.90 E-value=0.19 Score=50.39 Aligned_cols=79 Identities=11% Similarity=0.168 Sum_probs=43.7
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
.-+|+++||+|.+... .+.++ .+......|..+|++||++...... ........+ |..+.+-+ ....
T Consensus 119 ~~~f~~igD~~~~~~~-~~~l~----~~~~~~~~~D~vl~~GDl~y~~~~~-~~~~~~~~~-~~~~l~~~------~~~~ 185 (424)
T 2qfp_A 119 PYTFGLIGDLGQSFDS-NTTLS----HYELSPKKGQTVLFVGDLSYADRYP-NHDNVRWDT-WGRFTERS------VAYQ 185 (424)
T ss_dssp CEEEEEECSCTTBHHH-HHHHH----HHHTCSSCCCEEEECSCCSCGGGSG-GGCTHHHHH-HHHHHHHH------HTTS
T ss_pred CeEEEEEEeCCCCCCh-HHHHH----HHHhCCCCCCEEEEcCccccccccc-cccchHHHH-HHHHHHHH------HhcC
Confidence 3569999999987432 22233 3322212588999999998643211 111112211 22222222 2346
Q ss_pred eEEEecCCCCCC
Q 014802 363 RFLFIPGPDDAG 374 (418)
Q Consensus 363 ~~v~vPG~~Dp~ 374 (418)
+++.+|||||-.
T Consensus 186 P~~~v~GNHD~~ 197 (424)
T 2qfp_A 186 PWIWTAGNHEIE 197 (424)
T ss_dssp CEEECCCHHHHC
T ss_pred CeEeecCCcccc
Confidence 899999999965
No 44
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A*
Probab=89.58 E-value=0.78 Score=44.26 Aligned_cols=72 Identities=17% Similarity=0.212 Sum_probs=44.9
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+..++++||+| ++ +..|..+|...... +...+|++||+++... .+. +.++-|..+-..+|.
T Consensus 55 ~~~i~viGDIH-G~---~~~L~~ll~~~g~~--~~~~~vfLGD~VDrG~----~s~----evl~lL~~lk~~~p~----- 115 (299)
T 3e7a_A 55 EAPLKICGDIH-GQ---YYDLLRLFEYGGFP--PESNYLFLGDYVDRGK----QSL----ETICLLLAYKIKYPE----- 115 (299)
T ss_dssp CSSEEEECBCT-TC---HHHHHHHHHHHCST--TSSCEEECSCCSSSSS----CHH----HHHHHHHHHHHHSTT-----
T ss_pred CCCEEEEecCC-CC---HHHHHHHHHHhCCC--CCccEEeCCcccCCCC----CcH----HHHHHHHHHHhhCCC-----
Confidence 45799999999 44 34555566554321 3457999999998631 221 223333333234553
Q ss_pred eEEEecCCCCC
Q 014802 363 RFLFIPGPDDA 373 (418)
Q Consensus 363 ~~v~vPG~~Dp 373 (418)
+++++-||||-
T Consensus 116 ~v~~lrGNHE~ 126 (299)
T 3e7a_A 116 NFFLLRGNHEC 126 (299)
T ss_dssp TEEECCCTTSS
T ss_pred cEEEEecCchh
Confidence 69999999996
No 45
>3dm3_A Replication factor A; probably plays AN essential for replication of the chromosome, DNA recombination and repair; 2.40A {Methanocaldococcus jannaschii}
Probab=89.07 E-value=3.4 Score=33.29 Aligned_cols=62 Identities=19% Similarity=0.220 Sum_probs=41.8
Q ss_pred cceecccccCCCCc-EEEEEEEEEc--------cCC------cEEEeeCCcEEEEEeccccccceeeccCcEEEEEEEEe
Q 014802 166 EISTIQSLVGQTGR-RWVMGVISQL--------EDG------HFYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML 230 (418)
Q Consensus 166 ~it~I~~Llg~~g~-~~vlGml~~~--------~~g------~~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~ 230 (418)
.+++|+.|- .+. ..|.|.+... .+| .+.|.|.||+|++.+=+..... .+.+|.+|.+.|...
T Consensus 4 ~~~~I~dL~--~~~~v~v~g~V~~~~~~r~~~~~~G~~~~v~~~~l~D~TG~IrvtlW~~~a~~-~l~~Gdvv~i~g~vk 80 (105)
T 3dm3_A 4 DTYNIGELS--PGMTATFEGEVISALPIKEFKRADGSIGKLKSFIVRDETGSIRVTLWDNLTDI-DVGRGDYVRVRGYIR 80 (105)
T ss_dssp CEECGGGCC--SSEEEEEEEEEEEEEEEEEEECTTSCEEEEEEEEEEETTEEEEEEEEGGGGGS-CCCTTCEEEEEEEEE
T ss_pred cceEHHHCC--CCCeEEEEEEEEECCCceEEEcCCCCeeEEEEEEEECCCCcEEEEEECccccc-ccCCCCEEEEEEEEE
Confidence 467788773 334 3478877653 244 3669999999999754332222 578999999988654
No 46
>4gop_B Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=88.60 E-value=1.8 Score=36.50 Aligned_cols=67 Identities=12% Similarity=0.158 Sum_probs=45.1
Q ss_pred cEEEEEEEEEccCC----cEEEeeCCcEEEEEeccccc-----cceeeccCcEEEEEEEEe-eCCeEEEEEecCCCC
Q 014802 179 RRWVMGVISQLEDG----HFYLEDLAASVEIDLSKAKI-----TTGFFTENTIVVAEGEML-VDGIFQVITCGFPPL 245 (418)
Q Consensus 179 ~~~vlGml~~~~~g----~~~LED~tG~I~Ldls~~~~-----~~g~~~~g~vV~veG~~~-~~G~F~V~~i~~Pp~ 245 (418)
++.++|++....++ .|.|+|.||.|....=...- ...-|.+|++|-|.|... -+|.-++.....=|+
T Consensus 38 ~V~iVG~V~~~~~~~~~~~~~ldD~TG~I~~~~W~~~~~~~~~~~~~~~~g~yVrV~G~v~~f~g~~qi~~~~ir~v 114 (136)
T 4gop_B 38 QLTFVAVVRNISRNATNVAYSVEDGTGQIEVRQWLDSSSDDSSKASEIRNNVYVRVLGTLKSFQNRRSISSGHMRPV 114 (136)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEECSSCEEEEEEECC--------CCSCCTTCEEEEEEEEEEETTEEEEEESEEEEC
T ss_pred EEEEEEEEEEEEecCCeEEEEEECCCCCEEEEEecccCCcccccccccCCCCEEEEEEEEEEeCCEEEEEEEEEEEC
Confidence 35689999987554 37799999998885432111 135678999999999975 366655554333333
No 47
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A
Probab=88.58 E-value=1.1 Score=43.48 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=42.7
Q ss_pred CcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 284 DMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
.+++++||+| ++ +..|..+|...... .....+|++||+++.-- .+. +.++-|..+-..+|+ .
T Consensus 60 ~ri~viGDIH-G~---~~~L~~ll~~~g~~-~~~~~~vflGD~VDRG~----~s~----evl~lL~~lk~~~p~-----~ 121 (315)
T 3h63_A 60 EKITVCGDTH-GQ---FYDLLNIFELNGLP-SETNPYIFNGDFVDRGS----FSV----EVILTLFGFKLLYPD-----H 121 (315)
T ss_dssp CEEEEECCCT-TC---HHHHHHHHHHHCCC-BTTBCEEEESCCSSSST----THH----HHHHHHHHHHHHSTT-----T
T ss_pred ceEEEEecCC-CC---HHHHHHHHHHhCCC-CCCCEEEEeCCccCCCc----ChH----HHHHHHHHhhhhcCC-----c
Confidence 3589999999 44 34555566543211 01235999999998621 221 223333333233553 7
Q ss_pred EEEecCCCCC
Q 014802 364 FLFIPGPDDA 373 (418)
Q Consensus 364 ~v~vPG~~Dp 373 (418)
++++-||||-
T Consensus 122 v~~lrGNHE~ 131 (315)
T 3h63_A 122 FHLLRGNHET 131 (315)
T ss_dssp EEEECCTTSS
T ss_pred EEEEecCccc
Confidence 9999999995
No 48
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae}
Probab=88.24 E-value=0.98 Score=44.28 Aligned_cols=70 Identities=17% Similarity=0.236 Sum_probs=42.0
Q ss_pred cEEEEEccccCcHHHHHHHHHHHhcccCCCCCC-eEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccce
Q 014802 285 MFVILSDIWLDNEEVMGKLEVVLDGFESVEVVP-SLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSR 363 (418)
Q Consensus 285 ~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p-~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~ 363 (418)
+++++||+| ++- ..|..+|...... ++ ..+|++||+++.-- .+. +.+.-|..+-..+|. .
T Consensus 65 ri~viGDIH-G~~---~~L~~ll~~~g~~--~~~~~~vflGD~VDRG~----~s~----evl~lL~~lk~~~p~-----~ 125 (335)
T 3icf_A 65 KISVCGDTH-GQF---YDVLNLFRKFGKV--GPKHTYLFNGDFVDRGS----WSC----EVALLFYCLKILHPN-----N 125 (335)
T ss_dssp EEEEECCCT-TCH---HHHHHHHHHHCCC--BTTEEEEECSCCSSSST----THH----HHHHHHHHHHHHCTT-----T
T ss_pred eEEEEecCC-CCH---HHHHHHHHHcCCC--CCCcEEEEeCCccCCCc----ChH----HHHHHHHHHhhhCCC-----c
Confidence 499999999 433 4445555544221 12 46999999998621 221 223333333234553 6
Q ss_pred EEEecCCCCC
Q 014802 364 FLFIPGPDDA 373 (418)
Q Consensus 364 ~v~vPG~~Dp 373 (418)
++++-||||-
T Consensus 126 v~llrGNHE~ 135 (335)
T 3icf_A 126 FFLNRGNHES 135 (335)
T ss_dssp EEECCCTTSS
T ss_pred EEEecCchhh
Confidence 9999999995
No 49
>2k75_A Uncharacterized protein TA0387; closed beta barrel, OB fold, structural genomics, PSI-2, protein structure initiative; NMR {Thermoplasma acidophilum}
Probab=88.14 E-value=2.6 Score=33.99 Aligned_cols=40 Identities=18% Similarity=0.329 Sum_probs=28.8
Q ss_pred EEEeeCCcEEEEEeccccccceeeccCcEEEEE-EEEe-eCCeEEEE
Q 014802 194 FYLEDLAASVEIDLSKAKITTGFFTENTIVVAE-GEML-VDGIFQVI 238 (418)
Q Consensus 194 ~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~ve-G~~~-~~G~F~V~ 238 (418)
+.|.|+||+|++.+=+.. +.+|++|-++ |... -+|.+.+.
T Consensus 42 ~~l~DeTG~I~~tlW~~~-----l~~Gdvv~i~ng~v~~~~g~~~L~ 83 (106)
T 2k75_A 42 GYIEDDTARIRISSFGKQ-----LQDSDVVRIDNARVAQFNGYLSLS 83 (106)
T ss_dssp EEEECSSCEEEEEEESSC-----CCTTEEEEEEEEEEEEETTEEEEE
T ss_pred EEEEcCCCeEEEEEEcCc-----cCCCCEEEEEeeEEeEECCEEEEE
Confidence 458999999999765442 8899999999 4432 25655443
No 50
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3
Probab=86.65 E-value=1.1 Score=46.34 Aligned_cols=72 Identities=13% Similarity=0.196 Sum_probs=43.2
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+..++++||+| |+- ..|..+|... . ..+...+|++||+|+.-. .+. +.++-|-.+-..||.
T Consensus 82 ~~pI~VIGDIH-Gq~---~dL~~LL~~~-g-~p~~d~yVFLGDyVDRGp----~S~----Evl~lL~aLk~~~P~----- 142 (521)
T 1aui_A 82 DAPVTVCGDIH-GQF---FDLMKLFEVG-G-SPANTRYLFLGDYVDRGY----FSI----ECVLYLWALKILYPK----- 142 (521)
T ss_dssp CSSEEEECCCT-TCH---HHHHHHHHHH-C-CTTTCCEEECSCCSSSSS----CHH----HHHHHHHHHHHHSTT-----
T ss_pred ccceeeccCCC-CCH---HHHHHHHHhc-C-CCCcceEEEcCCcCCCCC----CHH----HHHHHHHHHhhhCCC-----
Confidence 45689999999 554 3444455421 1 112468999999998621 221 222323333223553
Q ss_pred eEEEecCCCCC
Q 014802 363 RFLFIPGPDDA 373 (418)
Q Consensus 363 ~~v~vPG~~Dp 373 (418)
.++++-||||-
T Consensus 143 ~v~lLRGNHE~ 153 (521)
T 1aui_A 143 TLFLLRGNHEC 153 (521)
T ss_dssp TEEECCCTTSS
T ss_pred eEEEecCCccH
Confidence 79999999996
No 51
>3e0e_A Replication protein A; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 1.60A {Methanococcus maripaludis} PDB: 2k5v_A
Probab=86.35 E-value=2.9 Score=33.06 Aligned_cols=59 Identities=17% Similarity=0.160 Sum_probs=38.5
Q ss_pred eecccccCCCCcE-EEEEEEEEcc--------CC---c---EEEeeCCcEEEEEeccccccceeeccCcEEEEEEEE
Q 014802 168 STIQSLVGQTGRR-WVMGVISQLE--------DG---H---FYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEM 229 (418)
Q Consensus 168 t~I~~Llg~~g~~-~vlGml~~~~--------~g---~---~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~ 229 (418)
.+|+.| +.|.. .+.|.+.... +| + +.|.|+||+|.+.+=+..... .+.+|.+|-+.|..
T Consensus 3 ~kI~dl--~~g~~v~i~~~V~~~~~~r~~~~~~G~~~~v~~~~l~DeTG~I~~tlW~~~~~~-~i~~Gdvv~i~g~v 76 (97)
T 3e0e_A 3 YKISEL--MPNLSGTINAEVVTAYPKKEFSRKDGTKGQLKSLFLKDDTGSIRGTLWNELADF-EVKKGDIAEVSGYV 76 (97)
T ss_dssp ECGGGC--CTTEEEEEEEEEEEECCCEEEC----CCEEEEEEEEEETTEEEEEEEEGGGGGC-CCCTTCEEEEEEEE
T ss_pred eEHHHC--CCCCcEEEEEEEEECCCceEEEcCCCCeeEEEEEEEECCCCcEEEEEECCcccc-ccCCCCEEEEEEEE
Confidence 356666 34443 4777776632 34 2 569999999999755432212 58899999999974
No 52
>1o7i_A SSB, SSO2364, single stranded DNA binding protein; OB fold; 1.2A {Sulfolobus solfataricus} SCOP: b.40.4.3
Probab=86.31 E-value=5.2 Score=32.73 Aligned_cols=68 Identities=18% Similarity=0.168 Sum_probs=41.6
Q ss_pred eecccccCCCCcEEEEEEEEEc--------cCCc-----EEEeeCCcEEEEEeccccccceeeccCcEEEEE-EEEe-eC
Q 014802 168 STIQSLVGQTGRRWVMGVISQL--------EDGH-----FYLEDLAASVEIDLSKAKITTGFFTENTIVVAE-GEML-VD 232 (418)
Q Consensus 168 t~I~~Llg~~g~~~vlGml~~~--------~~g~-----~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~ve-G~~~-~~ 232 (418)
++|+.|--.....-++|++... .+|+ +.|.|.||+|.+.+=+.. ...|.+|.+|.++ |... -+
T Consensus 3 ~~I~dL~~~~~~v~~~~~V~~~~~~~~~~~k~G~~~~~~~~l~D~TG~I~~tlW~~~--~~~~~~G~vv~i~~g~v~~~~ 80 (119)
T 1o7i_A 3 EKVGNLKPNMESVNVTVRVLEASEARQIQTKNGVRTISEAIVGDETGRVKLTLWGKH--AGSIKEGQVVKIENAWTTAFK 80 (119)
T ss_dssp CCGGGCCTTCSSEEEEEEEEEECCCEEECCTTCCEEEEEEEEEETTEEEEEEEEGGG--TTCCCTTCEEEEEEEEEEEET
T ss_pred EEHHHCcCCCCcEEEEEEEEECCCCeeEEecCCCEEEEEEEEEeCCCEEEEEEECCh--hhcCCCCCEEEEEeEEEEEeC
Confidence 4566663211224577777553 2353 448999999999765442 2358899999999 6543 24
Q ss_pred CeEEE
Q 014802 233 GIFQV 237 (418)
Q Consensus 233 G~F~V 237 (418)
|.+.+
T Consensus 81 g~~qL 85 (119)
T 1o7i_A 81 GQVQL 85 (119)
T ss_dssp TEEEE
T ss_pred CEEEE
Confidence 54433
No 53
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A
Probab=86.18 E-value=1.6 Score=43.14 Aligned_cols=72 Identities=14% Similarity=0.200 Sum_probs=44.5
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccc
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHS 362 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~ 362 (418)
+..++++||+| |+- ..|..+|+.... .+...+|++||+++.-. .+. +.++-|..+-..+|.
T Consensus 69 ~~pi~ViGDIH-G~~---~dL~~ll~~~g~--~~~~~~vfLGD~VDRG~----~s~----Evl~lL~~lk~~~p~----- 129 (357)
T 3ll8_A 69 DAPVTVCGDIH-GQF---FDLMKLFEVGGS--PANTRYLFLGDYVDRGY----FSI----ECVLYLWALKILYPK----- 129 (357)
T ss_dssp CSSEEEECCCT-TCH---HHHHHHHHHHCC--TTTCCEEECSCCSSSST----THH----HHHHHHHHHHHHCTT-----
T ss_pred cccceeeccCC-CCH---HHHHHHHHhcCC--CCCcEEEECCCccCCCc----ChH----HHHHHHHHhhhhcCC-----
Confidence 45799999999 443 445556654322 13468999999998621 121 223334333334553
Q ss_pred eEEEecCCCCC
Q 014802 363 RFLFIPGPDDA 373 (418)
Q Consensus 363 ~~v~vPG~~Dp 373 (418)
+++++-||||-
T Consensus 130 ~v~llrGNHE~ 140 (357)
T 3ll8_A 130 TLFLLRGNHEC 140 (357)
T ss_dssp TEEECCCTTSS
T ss_pred cEEEEeCchhh
Confidence 68999999996
No 54
>3kdf_D Replication protein A 32 kDa subunit; wheat GERM cell free, protein complex, center for eukaryotic structural genomics, PSI; HET: MSE; 1.98A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_A 1quq_A 1l1o_B
Probab=86.09 E-value=2.1 Score=35.89 Aligned_cols=61 Identities=13% Similarity=0.262 Sum_probs=41.9
Q ss_pred cEEEEEEEEEccCC----cEEEeeCCc-EEEEEecccc----ccceeeccCcEEEEEEEEe-eCCeEEEEE
Q 014802 179 RRWVMGVISQLEDG----HFYLEDLAA-SVEIDLSKAK----ITTGFFTENTIVVAEGEML-VDGIFQVIT 239 (418)
Q Consensus 179 ~~~vlGml~~~~~g----~~~LED~tG-~I~Ldls~~~----~~~g~~~~g~vV~veG~~~-~~G~F~V~~ 239 (418)
++.++|++....+. .|.|+|.|| +|....=... ....-|.+|++|-|.|... -+|.-++..
T Consensus 33 ~V~iVG~V~~~~~~~~~~~~~ldD~TG~~I~~~~W~~~~~~~~~~~~~~~g~yVrV~G~l~~f~g~~qi~~ 103 (132)
T 3kdf_D 33 QVTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVA 103 (132)
T ss_dssp EEEEEEEEEEEEECSSEEEEEEECSSSSCEEEEEEC---------CCCCTTCEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEEEEEEEcCCeEEEEEECCCCCEEEEEEEccCCCcccccccccCCCEEEEEEEEEeECCEEEEEE
Confidence 35689999987543 477999999 8988542211 1135678999999999975 356655544
No 55
>3mxn_B RECQ-mediated genome instability protein 2; bloom syndrome, helicase, RMI, topoisomerase, replication PR replication; 1.55A {Homo sapiens} PDB: 4day_B 3nbh_B
Probab=84.53 E-value=6.2 Score=33.83 Aligned_cols=51 Identities=14% Similarity=0.203 Sum_probs=40.8
Q ss_pred EEEEEEEEEccCCcEEEeeCCcEEEEEecccccc-ceeeccCcEEEEEEEEe
Q 014802 180 RWVMGVISQLEDGHFYLEDLAASVEIDLSKAKIT-TGFFTENTIVVAEGEML 230 (418)
Q Consensus 180 ~~vlGml~~~~~g~~~LED~tG~I~Ldls~~~~~-~g~~~~g~vV~veG~~~ 230 (418)
+++=|+|.....|.+.|.|.||.+.+...+..+. ...+..|..|+|-|.+.
T Consensus 61 VWmQG~VV~~~~g~~~LdDgTG~~~v~g~~~vp~g~p~l~~G~YVMV~G~v~ 112 (150)
T 3mxn_B 61 VWMQGRVVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMVMGVVQ 112 (150)
T ss_dssp EEEEEEEEEEETTEEEEEETTEEEEEECGGGSCCCSCCCSTTCEEEEEEEEE
T ss_pred EEEEeEEEEeCCCeEEEECCCceEEEeeccccCCCCcccCCCCEEEEEEEEE
Confidence 6789999998889999999999999865544322 23466999999999985
No 56
>2kbn_A Conserved protein; nucleic acid binding protein, beta barrel, structural genomics, PSI-2, protein structure initiative; NMR {Methanosarcina mazei} PDB: 2ken_A
Probab=83.40 E-value=8.6 Score=31.00 Aligned_cols=71 Identities=14% Similarity=0.130 Sum_probs=44.7
Q ss_pred ceecccccCCCCcEEEEEEEEEcc---CCc----EEEeeCCcEEEEEeccccccceeeccCcEEEEEEEEe--eCCeEEE
Q 014802 167 ISTIQSLVGQTGRRWVMGVISQLE---DGH----FYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML--VDGIFQV 237 (418)
Q Consensus 167 it~I~~Llg~~g~~~vlGml~~~~---~g~----~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~--~~G~F~V 237 (418)
+++|+.|.-....+-+.|++.... .|. ..|.|.||+|++.+=+.. ....+.+|++|-++|-+. -+|.+.+
T Consensus 5 ~~kI~dl~~~~~~v~v~~~V~~~~~~~~~~~~~~~~l~DeTG~I~~t~W~~~-~~~~~~~G~~V~i~n~~v~~~~G~~~L 83 (109)
T 2kbn_A 5 LTKIVDIVENGQWANLKAKVIQLWENTHESISQVGLLGDETGIIKFTIWKNA-ELPLLEQGESYLLRSVVVGEYNDRFQV 83 (109)
T ss_dssp BCCTTTCCSTTCEEEEEEEEEEEEECCCSSEEEEEEEECTTCCEEEEEEGGG-CCCCCCTTCEEEEEEEEEEEETTEEEE
T ss_pred ceEHHHCCCCCCcEEEEEEEEEeEcCCCCeEEEEEEEECCCCeEEEEEECcc-cccccCCCCEEEEEEEEEEEECCEEEE
Confidence 455666631122345777777642 222 458999999999876532 235788999999995442 3566555
Q ss_pred E
Q 014802 238 I 238 (418)
Q Consensus 238 ~ 238 (418)
.
T Consensus 84 ~ 84 (109)
T 2kbn_A 84 Q 84 (109)
T ss_dssp E
T ss_pred E
Confidence 4
No 57
>2pi2_A Replication protein A 32 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2z6k_A 1dpu_A 1z1d_A
Probab=78.90 E-value=5.7 Score=37.39 Aligned_cols=60 Identities=13% Similarity=0.258 Sum_probs=41.9
Q ss_pred EEEEEEEEEccCC----cEEEeeCCc-EEEEEecccc----ccceeeccCcEEEEEEEEe-eCCeEEEEE
Q 014802 180 RWVMGVISQLEDG----HFYLEDLAA-SVEIDLSKAK----ITTGFFTENTIVVAEGEML-VDGIFQVIT 239 (418)
Q Consensus 180 ~~vlGml~~~~~g----~~~LED~tG-~I~Ldls~~~----~~~g~~~~g~vV~veG~~~-~~G~F~V~~ 239 (418)
+.++|+|....++ .|.|+|.|| +|...+=... .....|.+|++|-|.|... -+|..++.-
T Consensus 74 V~ivG~V~~i~~~~~~~~~~L~D~TG~~I~~k~W~~~~~~~~~~~~~~~G~yVrV~G~v~~f~g~~qi~i 143 (270)
T 2pi2_A 74 VTIVGIIRHAEKAPTNIVYKIDDMTAAPMDVRQWVDTDDTSSENTVVPPETYVKVAGHLRSFQNKKSLVA 143 (270)
T ss_dssp EEEEEEEEEEEECSSEEEEEEECSSSSCEEEEEECC-------CCCCCTTCEEEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEEEEEeccceEEEEEECCCCCEEEEEEEcCcCcccchhhcCCCCCEEEEEEEEEecCCeeEEEE
Confidence 4589999887554 377999999 8888543221 1235688999999999975 356665543
No 58
>1wjj_A Hypothetical protein F20O9.120; DNA-binding protein-related, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.40.4.3
Probab=64.53 E-value=33 Score=29.18 Aligned_cols=43 Identities=7% Similarity=0.190 Sum_probs=32.0
Q ss_pred EEEeeCCcEEEEEeccccccceeeccCcEEEEEEEEe--eCCeEEEE
Q 014802 194 FYLEDLAASVEIDLSKAKITTGFFTENTIVVAEGEML--VDGIFQVI 238 (418)
Q Consensus 194 ~~LED~tG~I~Ldls~~~~~~g~~~~g~vV~veG~~~--~~G~F~V~ 238 (418)
..|-|+||+|.+.+-+.. ..++.+|.+|.+++.|. -.|.+.+.
T Consensus 66 ~lVgDeTG~I~ftlW~e~--~~~l~~Gd~v~i~na~v~~~~G~~~L~ 110 (145)
T 1wjj_A 66 CLIGDETGCILFTARNDQ--VDLMKPGATVILRNSRIDMFKGTMRLG 110 (145)
T ss_dssp EEEECSSCEEEEEECTTH--HHHTCTTCEEEEEEEEEEEETTEEEEE
T ss_pred EEEEcCCcEEEEEEecCC--cCcCCCCCEEEEeccEEEeECCEEEEE
Confidence 679999999999876542 24577999999998874 24555443
No 59
>1ynx_A Replication factor-A protein 1; canonical OB fold, DNA binding protein; NMR {Saccharomyces cerevisiae}
Probab=64.15 E-value=11 Score=30.47 Aligned_cols=63 Identities=13% Similarity=0.082 Sum_probs=40.7
Q ss_pred cceecccccCCCCcEEEEEEEEE--------c--cCCc---EEEeeCCcEEEEEeccccc--cceeeccCcEEEEEEE
Q 014802 166 EISTIQSLVGQTGRRWVMGVISQ--------L--EDGH---FYLEDLAASVEIDLSKAKI--TTGFFTENTIVVAEGE 228 (418)
Q Consensus 166 ~it~I~~Llg~~g~~~vlGml~~--------~--~~g~---~~LED~tG~I~Ldls~~~~--~~g~~~~g~vV~veG~ 228 (418)
.++||+.|--......|.|.++. + .+|+ +.|-|++|+|++.+-+... -...+.+|.++.+.|-
T Consensus 3 ~~~~Is~L~p~~~~w~I~~rV~~k~~~r~~~~~~~~g~~~~~~L~De~G~I~at~~~~~~~~f~~~l~eG~vy~Is~~ 80 (114)
T 1ynx_A 3 PIFAIEQLSPYQNVWTIKARVSYKGEIKTWHNQRGDGKLFNVNFLDTSGEIRATAFNDFATKFNEILQEGKVYYVSKA 80 (114)
T ss_dssp CBCCGGGCCTTTCCCEEEEEEEEEEEEEEEECSSCEEEEEEEEEEETTEEEEEEECHHHHHHHHHHSCSSSEEEEESC
T ss_pred ceEEHHHCCCCCCceEEEEEEEEeccceEEecCCCCceEEEEEEECCCCeEEEEECHHHHHHHHhhcccCcEEEECCc
Confidence 57899988322222346777773 2 2343 5599999999997764321 1356789998888653
No 60
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=58.52 E-value=15 Score=41.91 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=33.7
Q ss_pred CCc-EEEEEEEEEc-----cCC----cEEEeeCCcEEEEEecccccc--ceeeccCcEEEEEEEEeeC
Q 014802 177 TGR-RWVMGVISQL-----EDG----HFYLEDLAASVEIDLSKAKIT--TGFFTENTIVVAEGEMLVD 232 (418)
Q Consensus 177 ~g~-~~vlGml~~~-----~~g----~~~LED~tG~I~Ldls~~~~~--~g~~~~g~vV~veG~~~~~ 232 (418)
.|+ +.|.|||+.. ..| -+.|||.||.+++.+-...+. ..++.++.+|+|+|+...+
T Consensus 1041 ~g~~v~v~G~v~~~~~~~Tk~G~~maf~tleD~tg~~evvvf~~~~~~~~~~l~~~~~~~v~G~v~~~ 1108 (1220)
T 2hpi_A 1041 GKPKVLLSGMVEEVVRKPTRSGGMMARFTLSDETGALEVVVFGRAYEGVSPKLKEDIPLLVLAEVEKG 1108 (1220)
T ss_dssp SSCEEEEEEEECCC------------CEEEEETTEEEEEC-------------CTTCEEEEEEEEC--
T ss_pred CCCeEEEEEEEEEEEEeecCCCCeEEEEEEEECCCCEEEEEcHHHHHHHHHHhccCCEEEEEEEEEEC
Confidence 455 5589999874 345 366999999999965433222 3577899999999998543
No 61
>1jr3_D DNA polymerase III, delta subunit; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1jqj_C* 1xxh_A* 1xxi_A* 3glf_A* 3glg_A* 3glh_A* 3gli_A*
Probab=58.06 E-value=32 Score=32.63 Aligned_cols=63 Identities=11% Similarity=0.015 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHHHH
Q 014802 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSV 72 (418)
Q Consensus 4 ~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~ 72 (418)
++.+.|.+.++.+|+.+.++|+++|++..+. +-..+...++.+.-. ..+..|+.+.|++++..
T Consensus 146 ~l~~~l~~~~~~~g~~i~~~a~~~l~~~~~g----dl~~~~~elekl~l~--~~~~~It~e~V~~~~~~ 208 (343)
T 1jr3_D 146 QLPRWVAARAKQLNLELDDAANQVLCYCYEG----NLLALAQALERLSLL--WPDGKLTLPRVEQAVND 208 (343)
T ss_dssp HHHHHHHHHHHHTTCEECHHHHHHHHHSSTT----CHHHHHHHHHHHHHH--CTTCEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHhch----HHHHHHHHHHHHHHh--cCCCCCCHHHHHHHHhh
Confidence 6778888999999999999999999985543 222222222222221 11336888888887653
No 62
>3b0b_C CENP-X, centromere protein X; histone fold, DNA binding, DNA, nucleus, DNA binding protein; 2.15A {Gallus gallus} PDB: 3vh5_D 3vh6_D
Probab=55.33 E-value=13 Score=28.60 Aligned_cols=63 Identities=19% Similarity=0.148 Sum_probs=41.4
Q ss_pred HHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHH
Q 014802 6 RKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLL 74 (418)
Q Consensus 6 ~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~~~ 74 (418)
.+-+...|+...-.|++||++..++|+.-+ - .+++.+-.. .++. ..+.+|+.++++++..++.
T Consensus 15 ~ril~~~f~~~ktrI~~dAl~l~aeyl~iF-V--~EAv~RA~~-~a~~--e~~~~le~~~LEki~pqLl 77 (81)
T 3b0b_C 15 ERLLRLHFRDGRTRVNGDALLLMAELLKVF-V--REAAARAAR-QAQA--EDLEKVDIEHVEKVLPQLL 77 (81)
T ss_dssp HHHHHHHCCSTTCEECHHHHHHHHHHHHHH-H--HHHHHHHHH-HHHH--TTCSEECHHHHHHHHHHHH
T ss_pred HHHHHHHhccCcccccHHHHHHHHHHHHHH-H--HHHHHHHHH-HHHh--CCCCeecHHHHHHHHHHHH
Confidence 344445567788899999999999887532 1 122222221 1222 5578999999999988763
No 63
>4dra_E Centromere protein X; DNA binding complex, DNA damage repair, histone-fold, DNA BI protein; 2.41A {Homo sapiens} PDB: 4drb_J
Probab=51.60 E-value=19 Score=27.94 Aligned_cols=57 Identities=19% Similarity=0.156 Sum_probs=36.3
Q ss_pred HHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHH
Q 014802 12 KMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLL 74 (418)
Q Consensus 12 ~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~~~ 74 (418)
.|+...-.|++||++..++|+.-+ - .+++.+-.. .++. ..+.+|+.+++|+++.++.
T Consensus 25 ~F~~~kTkIs~dAl~l~aeyl~iF-V--~EAv~RA~~-~a~~--e~~~~le~e~LEki~pQLl 81 (84)
T 4dra_E 25 HFKDDKTKVSGDALQLMVELLKVF-V--VEAAVRGVR-QAQA--EDALRVDVDQLEKVLPQLL 81 (84)
T ss_dssp TCSSTTCEECHHHHHHHHHHHHHH-H--HHHHHHHHH-HHHH--TTCSSBCHHHHHHHHHHHH
T ss_pred HhcCCCccccHHHHHHHHHHHHHH-H--HHHHHHHHH-HHHh--cCCCcccHHHHHHHHHHHh
Confidence 345566679999999999877642 1 122222221 1222 4567899999999988763
No 64
>1jmc_A Protein (replication protein A (RPA)); human ssDNA binding replication protein A(RPA), single stranded DNA-binding protein, protein-ssDNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: b.40.4.3 b.40.4.3 PDB: 1fgu_A
Probab=48.64 E-value=32 Score=31.23 Aligned_cols=66 Identities=15% Similarity=0.212 Sum_probs=42.8
Q ss_pred cccceecccccCC-CCcE-EEEEEEEEcc---------CCc------EEEeeCCc-EEEEEeccccccceeeccCcEEEE
Q 014802 164 SCEISTIQSLVGQ-TGRR-WVMGVISQLE---------DGH------FYLEDLAA-SVEIDLSKAKITTGFFTENTIVVA 225 (418)
Q Consensus 164 ~~~it~I~~Llg~-~g~~-~vlGml~~~~---------~g~------~~LED~tG-~I~Ldls~~~~~~g~~~~g~vV~v 225 (418)
.+.+++|..|... .+.. -|+|+|.... +|+ +.|.|.|| .|++.+=+.....-...+|.||++
T Consensus 123 ~~~f~~i~~i~~~~~~~~vDViG~V~~v~~~~~~~~k~~g~~~~~r~~~l~D~sg~~i~~tLWg~~a~~~~~~~~~vv~i 202 (246)
T 1jmc_A 123 QFDFTGIDDLENKSKDSLVDIIGICKSYEDATKITVRSNNREVAKRNIYLMDTSGKVVTATLWGEDADKFDGSRQPVLAI 202 (246)
T ss_dssp CCCBCCGGGGGGSCTTCEEEEEEEEEEECCCEEEEETTTTEEEEEEEEEEECTTCCEEEEEEEHHHHHHCCCTTCCEEEE
T ss_pred eeeeEEHHHHhcccCCCceeEEEEEEEecCeEEEEEecCCCccEEEEEEEECCCCCEEEEEEEchhhhhcccCCCCEEEE
Confidence 3567888888643 2443 3899998642 242 56899999 488877643221111367888888
Q ss_pred EEEE
Q 014802 226 EGEM 229 (418)
Q Consensus 226 eG~~ 229 (418)
.|..
T Consensus 203 ~~~~ 206 (246)
T 1jmc_A 203 KGAR 206 (246)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 65
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=47.48 E-value=73 Score=26.87 Aligned_cols=60 Identities=12% Similarity=0.229 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHHH
Q 014802 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTS 71 (418)
Q Consensus 4 ~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~ 71 (418)
..++.+.+.++..|+.+.+++++.|.+..+ .+...+..+++.+... +..|+.+.+++++.
T Consensus 165 ~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~----g~~r~l~~~l~~~~~~----~~~I~~~~v~~~~~ 224 (226)
T 2chg_A 165 AMKKRLLEICEKEGVKITEDGLEALIYISG----GDFRKAINALQGAAAI----GEVVDADTIYQITA 224 (226)
T ss_dssp HHHHHHHHHHHHHTCCBCHHHHHHHHHHHT----TCHHHHHHHHHHHHHT----CSCBCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHcC----CCHHHHHHHHHHHHhc----CceecHHHHHHHhc
Confidence 445555666688899999999999987443 2234444555555544 36899999988764
No 66
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=47.33 E-value=30 Score=30.13 Aligned_cols=62 Identities=16% Similarity=0.208 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccC-CCcccccHHHHHHHHH
Q 014802 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESS-LKSSIIDKESVNRVTS 71 (418)
Q Consensus 5 ~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~-~~~~~vd~~~~~~~~~ 71 (418)
.++.+.+.++.+|+.+.++++++|++..+ | +-..+..+++.+... . ..+..|+.+.++++++
T Consensus 179 ~~~~l~~~~~~~~~~~~~~~~~~l~~~~~---g-~~r~l~~~l~~~~~~-a~~~~~~It~~~v~~~l~ 241 (242)
T 3bos_A 179 KLAALQRRAAMRGLQLPEDVGRFLLNRMA---R-DLRTLFDVLDRLDKA-SMVHQRKLTIPFVKEMLR 241 (242)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHTT---T-CHHHHHHHHHHHHHH-HHHHTCCCCHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHcc---C-CHHHHHHHHHHHHHH-HHHhCCCCcHHHHHHHhh
Confidence 34444455578999999999999998543 2 223333333333221 1 1234589998888764
No 67
>3m4p_A Ehasnrs, asparaginyl-tRNA synthetase, putative; aminoacyl-tRNA synthetase, tRNA ligase, AARS, translation, ATP-binding, nucleotide-binding; HET: 4AD; 2.83A {Entamoeba histolytica} PDB: 3m4q_A
Probab=45.10 E-value=44 Score=33.85 Aligned_cols=63 Identities=13% Similarity=0.159 Sum_probs=42.9
Q ss_pred eecccccCCCCc-EEEEEEEEEcc-CCc----EEEeeCCcEEEEEecccccc----ceeeccCcEEEEEEEEe
Q 014802 168 STIQSLVGQTGR-RWVMGVISQLE-DGH----FYLEDLAASVEIDLSKAKIT----TGFFTENTIVVAEGEML 230 (418)
Q Consensus 168 t~I~~Llg~~g~-~~vlGml~~~~-~g~----~~LED~tG~I~Ldls~~~~~----~g~~~~g~vV~veG~~~ 230 (418)
+.|+.+....|+ +.|-|-|.... -|+ +.|.|.+|.|++.++..... ..-+..|++|.|+|...
T Consensus 20 ~~i~~~~~~~g~~V~v~Gwv~~~R~~Gk~~~Fi~LrD~sg~iQvv~~~~~~~~~~~~~~l~~g~~V~V~G~v~ 92 (456)
T 3m4p_A 20 CNIRDAAGLEGKLVTFKGWAYHIRKARKTLIFVELRDGSGYCQCVIFGKELCEPEKVKLLTRECSLEITGRLN 92 (456)
T ss_dssp EECCSTTCCCSSEEEEEEEEEEEECCSSSEEEEEEECSSCEEEEEEESTTTTCHHHHTTCCTTCEEEEEEEEE
T ss_pred EEhhhhhhcCCCEEEEEEEEEEEecCCCceEEEEEEeCCccEEEEEecccchhhHHhhcCCCccEEEEEeEEE
Confidence 445555434455 55999997753 443 45999999999988752111 12367899999999974
No 68
>2z1a_A 5'-nucleotidase; metal-binding, nucleotide-binding, hydrolase, structural genomics, NPPSFA; HET: THM; 1.75A {Thermus thermophilus} SCOP: d.114.1.1 d.159.1.2
Probab=41.73 E-value=10 Score=39.34 Aligned_cols=46 Identities=13% Similarity=0.091 Sum_probs=28.4
Q ss_pred CCcEEEEEcccc--CcH-----------HHHHHHHHHHhcccCCCCCCeEEEEEcCCCCC
Q 014802 283 NDMFVILSDIWL--DNE-----------EVMGKLEVVLDGFESVEVVPSLFVFMGNFCSH 329 (418)
Q Consensus 283 ~~~~v~lSDv~l--d~~-----------~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~ 329 (418)
+-+|+.+||+|- ... .-+..+..++...... .+...++..||++++
T Consensus 29 ~l~Il~~~D~H~~~~~~~~~~~~~~~~~gg~~~~~~~v~~~r~~-~~~~l~l~~GD~~~g 87 (552)
T 2z1a_A 29 TLTLVHTNDTHAHLEPVELTLSGEKTPVGGVARRVALFDRVWAR-AKNPLFLDAGDVFQG 87 (552)
T ss_dssp EEEEEEECCCTTCCSCEEEECSSSEEEECCHHHHHHHHHHHHHH-SSSEEEEECSCCSSS
T ss_pred eEEEEEEcccccCcccccccCcccccccCCHHHHHHHHHHHHhh-CCCEEEEeCCCCCCC
Confidence 356888999993 322 1234556666655432 134588899999875
No 69
>1n9w_A Aspartyl-tRNA synthetase 2; biosynthetic protein; 2.30A {Thermus thermophilus} SCOP: b.40.4.1 d.104.1.1 PDB: 3kfu_A*
Probab=39.24 E-value=69 Score=32.00 Aligned_cols=48 Identities=15% Similarity=0.212 Sum_probs=37.3
Q ss_pred Cc-EEEEEEEEEcc-CCc---EEEeeCCcEEEEEeccccccceeec-cCcEEEEEEEEe
Q 014802 178 GR-RWVMGVISQLE-DGH---FYLEDLAASVEIDLSKAKITTGFFT-ENTIVVAEGEML 230 (418)
Q Consensus 178 g~-~~vlGml~~~~-~g~---~~LED~tG~I~Ldls~~~~~~g~~~-~g~vV~veG~~~ 230 (418)
|+ +.|-|-|.... .|+ +.|.|.+|.|++.++. ..+. .|++|.|+|...
T Consensus 13 ~~~V~v~Gwv~~~R~~g~~~F~~lrD~~g~iQ~v~~~-----~~l~~~~~~v~v~G~v~ 66 (422)
T 1n9w_A 13 GQEVELLGFLHWRRDLGRIQFLLLRDRSGVVQVVTGG-----LKLPLPESALRVRGLVV 66 (422)
T ss_dssp TSEEEEEEEEEEEEECSSEEEEEEEETTEEEEEEEES-----CCCCCTTCEEEEEEEEE
T ss_pred CCEEEEEEEEEEEecCCCeEEEEEEECCEEEEEEEEc-----cccCCCCCEEEEEEEEE
Confidence 44 56999998754 355 4489999999998764 3467 799999999985
No 70
>1hp1_A 5'-nucleotidase; metallophosphatase, dinuclear, metalloenzyme, hydrolase, domain movement; HET: ATP; 1.70A {Escherichia coli} SCOP: d.114.1.1 d.159.1.2 PDB: 1ush_A 2ush_A 1hpu_A* 1ho5_A* 1oi8_A 1oid_A 1oie_A
Probab=38.82 E-value=14 Score=37.82 Aligned_cols=46 Identities=13% Similarity=0.041 Sum_probs=26.4
Q ss_pred CcEEEEEccccCcHH------HHHHHHHHHhcccCC---CCCCeEEEEEcCCCCC
Q 014802 284 DMFVILSDIWLDNEE------VMGKLEVVLDGFESV---EVVPSLFVFMGNFCSH 329 (418)
Q Consensus 284 ~~~v~lSDv~ld~~~------~l~~L~~l~~~~~~~---~~~p~~~Vl~Gnf~s~ 329 (418)
-+|+.+||+|-.-.. -+.++..++..+... ..+...+|.+||++++
T Consensus 9 l~Il~~~D~H~~~~~~~~~~~G~~~~~~~v~~~r~~~~~~~~~~lvl~~GD~~~g 63 (516)
T 1hp1_A 9 ITVLHTNDHHGHFWRNEYGEYGLAAQKTLVDGIRKEVAAEGGSVLLLSGGDINTG 63 (516)
T ss_dssp EEEEEECCCTTCCSCCTTSCCCHHHHHHHHHHHHHHHHHHTCEEEEEECSCCSSS
T ss_pred EEEEEecccccCccCCCCCCcCHHHHHHHHHHHHHhhhccCCCEEEEeCCccCCC
Confidence 457779999964211 123444444444221 0123789999999865
No 71
>1u9p_A PARC; unknown function; 1.90A {Escherichia coli} SCOP: a.43.1.1
Probab=38.35 E-value=91 Score=25.68 Aligned_cols=70 Identities=13% Similarity=0.210 Sum_probs=49.2
Q ss_pred CChHHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCCh--------HHHHHHHHHHHhhccCCCcccccHHHHHHHHHH
Q 014802 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAE--------DEAIDLLLDQFEHESSLKSSIIDKESVNRVTSV 72 (418)
Q Consensus 1 m~~~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~--------~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~ 72 (418)
|.+.++++|....+..|.++.......|.+.+....... .++++ .+..++++ ....|..+..+++.+.
T Consensus 25 LP~eLh~~La~~Ak~eGrSLN~eIv~~Le~sl~~~~~~~~~~~s~~~~~l~~-~ir~~a~~---~~~s~~~ei~~r~~~~ 100 (120)
T 1u9p_A 25 WPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIGGTGGSGGGREVLD-LVRKVAEE---NGRSVNSEIYQRVMES 100 (120)
T ss_dssp CCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHTTSCCC-----CSHHHHH-HHHHHHHH---HTCCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcccCCcccccccccchHHHH-HHHHHHHH---HHhhhHHHHHHHHHHH
Confidence 456899999999999999999999999999887653321 23444 33344443 2345667777777776
Q ss_pred HH
Q 014802 73 LL 74 (418)
Q Consensus 73 ~~ 74 (418)
++
T Consensus 101 ~~ 102 (120)
T 1u9p_A 101 FK 102 (120)
T ss_dssp HH
T ss_pred Hh
Confidence 65
No 72
>2yeq_A Apased, PHOD, alkaline phosphatase D; hydrolase, phosphodiesterase; HET: PE5; 1.93A {Bacillus subtilis}
Probab=37.25 E-value=71 Score=32.76 Aligned_cols=79 Identities=9% Similarity=0.085 Sum_probs=46.4
Q ss_pred CCcEEEEEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCC--CCCCCC-------------CcchHHHHHHHHH
Q 014802 283 NDMFVILSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCS--HPCNLS-------------FHSFSSLRLQFGK 347 (418)
Q Consensus 283 ~~~~v~lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s--~~~~~~-------------~~~~~~~~~~f~~ 347 (418)
..+|++.||.+.... ....++.+.+ ..|..+|.+||++- ++..+. ..+..+|++.|..
T Consensus 116 ~~rfa~~sc~~~~~g-~~~~~~~ia~------~~~D~vlhlGD~iY~d~~~~~~~~~~~~R~~~~~e~~tl~~yr~~y~~ 188 (527)
T 2yeq_A 116 QMTFAFASCQQYEHG-YYTAYKHMAK------EKLDLVFHLGDYIYEYGPNEYVSKTGNVRTHNSAEIITLQDYRNRHAQ 188 (527)
T ss_dssp CEEEEEECCCCGGGC-CCHHHHHHTT------SCCSEEEECSCSSCCCCTTSSCCTTCCCSCCSSSSCCSHHHHHHHHHH
T ss_pred CeEEEEEecCCCCCC-ccHHHHHHHh------cCCCEEEecCCcccCCCCCcccccccccccCCcccccCHHHHHHHHHH
Confidence 356888898765321 1233444432 25889999999983 222110 0124556665543
Q ss_pred ------HHHHHhcCCCccccceEEEecCCCCCCC
Q 014802 348 ------LGQMIAAHPRLKEHSRFLFIPGPDDAGP 375 (418)
Q Consensus 348 ------La~~l~~~p~l~~~~~~v~vPG~~Dp~~ 375 (418)
|..+. +..+++.+.||||-..
T Consensus 189 ~~~dp~lq~~~-------a~~P~i~~wDDHE~~n 215 (527)
T 2yeq_A 189 YRSDANLKAAH-------AAFPWVVTWDDHEVEN 215 (527)
T ss_dssp HHTCHHHHHHH-------HHSEEEECCCSTTTST
T ss_pred HhCCHHHHHHH-------hcCCEEEecccccccC
Confidence 33333 3578999999999864
No 73
>2lnb_A Z-DNA-binding protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, immune system; NMR {Homo sapiens}
Probab=33.59 E-value=93 Score=23.67 Aligned_cols=42 Identities=14% Similarity=0.253 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhc
Q 014802 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHE 53 (418)
Q Consensus 5 ~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~ 53 (418)
.+..|+++++..|=-+++--++... |.+.+.+++.|.++.+.
T Consensus 20 ~eekVLe~LkeaG~PlkageIae~~-------GvdKKeVdKaik~LKkE 61 (80)
T 2lnb_A 20 LEQRILQVLTEAGSPVKLAQLVKEC-------QAPKRELNQVLYRMKKE 61 (80)
T ss_dssp HHHHHHHHHHHHTSCEEHHHHHHHH-------TSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHH-------CCCHHHHHHHHHHHHHc
Confidence 4666777777777666665555543 34445555555555554
No 74
>4gop_A Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=33.03 E-value=1.5e+02 Score=23.84 Aligned_cols=51 Identities=16% Similarity=0.323 Sum_probs=37.7
Q ss_pred CcE-EEEEEEEEccCCcEEEeeCC-cEEEEEeccccccceeeccCcEEEEEEEEeeC
Q 014802 178 GRR-WVMGVISQLEDGHFYLEDLA-ASVEIDLSKAKITTGFFTENTIVVAEGEMLVD 232 (418)
Q Consensus 178 g~~-~vlGml~~~~~g~~~LED~t-G~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~ 232 (418)
|+. .++|-+.+...+.+.|+..+ |.|.+.++... -+..+.+|-|.|+...+
T Consensus 18 g~~VrivGkV~~~~g~~~~l~s~d~~~Vtv~l~~~~----~~~~~~~vEViG~V~~~ 70 (114)
T 4gop_A 18 GQTVRIVGKVHKVTGNTLLMQTSDLGNVEIAMTPDS----DVSSSTFVEVTGKVSDA 70 (114)
T ss_dssp TSEEEEEEEEEEEETTEEEEECTTSCEEEEECCSSC----CGGGCSEEEEEEEECTT
T ss_pred CCeEEEEEEEeeeCCCEEEEEeCCCCEEEEEeCCCC----CcccCcEEEEEEEEcCC
Confidence 554 59999999887888898865 48888876431 13357788999998755
No 75
>3au7_A TIAS, putative uncharacterized protein; ATP hydrolysis, RNA binding protein; 2.60A {Archaeoglobus fulgidus} PDB: 3amt_A* 3amu_A*
Probab=33.01 E-value=1.5e+02 Score=29.39 Aligned_cols=60 Identities=17% Similarity=0.247 Sum_probs=42.6
Q ss_pred EEEEEEEEEc----cCCc--EEEeeCCcEEEEEecc-c-ccc--ceeeccCcEEEEEEEEeeCCeEEEEEe
Q 014802 180 RWVMGVISQL----EDGH--FYLEDLAASVEIDLSK-A-KIT--TGFFTENTIVVAEGEMLVDGIFQVITC 240 (418)
Q Consensus 180 ~~vlGml~~~----~~g~--~~LED~tG~I~Ldls~-~-~~~--~g~~~~g~vV~veG~~~~~G~F~V~~i 240 (418)
.+|-|-|+.. +.|+ +.|+|.+++|.+..=+ + .+. .-.+++||.|.|.|.+ ..|.+.+..|
T Consensus 287 ~~v~G~V~~~P~~~~GGHV~f~l~d~~~~i~c~ayeptk~fr~~vr~L~~GD~V~v~G~v-~~gtLnvEk~ 356 (402)
T 3au7_A 287 YRLRGRVTLEPYDIEGGHVFFEIDTKFGSVKCAAFEPTKQFRNVIRLLRKGDVVEVYGSM-KKDTINLEKI 356 (402)
T ss_dssp EEEEEEEEEEEEEETTTEEEEEEEETTEEEEEEECGGGTTHHHHHTTCCTTCEEEEEEEE-ETTEEEEEEE
T ss_pred EEEEEEEecCcEeccCceEEEEEEcCCCEEEEEEEccchHHHHHHhcCCCCCEEEEEEee-cCCEEEEEEE
Confidence 5689999975 4466 4489999999886533 1 121 1345899999999998 5568777654
No 76
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=32.61 E-value=2.2e+02 Score=23.88 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=43.9
Q ss_pred cccCC-CCc-EEEEEEEEEc--cCCcEEEeeCCc-EEEEEeccccccceeeccCcEEEEEEEEeeCCeEEEEEe
Q 014802 172 SLVGQ-TGR-RWVMGVISQL--EDGHFYLEDLAA-SVEIDLSKAKITTGFFTENTIVVAEGEMLVDGIFQVITC 240 (418)
Q Consensus 172 ~Llg~-~g~-~~vlGml~~~--~~g~~~LED~tG-~I~Ldls~~~~~~g~~~~g~vV~veG~~~~~G~F~V~~i 240 (418)
++|++ .|+ +.++|-+.+. ..+.+.|+..+| .|.+.+.... +.- .+-+|-|.|+...++...+..+
T Consensus 36 s~L~~fvGk~VriVGkV~~~~~~G~~~~l~s~Dg~~VtV~l~~pL---~~~-~~~~VEViG~V~~~~tI~~~~~ 105 (142)
T 2pi2_E 36 GMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPL---DEE-ISGIVEVVGRVTAKATILCTSY 105 (142)
T ss_dssp GGGGGSTTCEEEEEEEEEEECTTSSEEEEECTTSCEEEEECSSCC---SSC-CCSEEEEEEEECTTSCEEEEEE
T ss_pred HHHHhhCCCEEEEEEEEeEEcCCCCEEEEEeCCCcEEEEEeCCCC---Ccc-CCCEEEEEEEECCCCcEEEEEE
Confidence 34433 366 4599999998 556677888866 8888775321 111 3568899999977777776654
No 77
>1e1o_A Lysyl-tRNA synthetase, heat inducible; ligase, aminoacyl-tRNA synthetase, protein biosynthesis; HET: LYS; 2.12A {Escherichia coli} SCOP: b.40.4.1 d.104.1.1 PDB: 1e1t_A* 1e22_A* 1e24_A* 1lyl_A 1bbu_A* 1bbw_A 1krs_A 1krt_A
Probab=32.36 E-value=1.2e+02 Score=31.07 Aligned_cols=51 Identities=16% Similarity=0.278 Sum_probs=37.5
Q ss_pred EEEEEEEEEcc-CCc---EEEeeCCcEEEEEecccccc-------ceeeccCcEEEEEEEEe
Q 014802 180 RWVMGVISQLE-DGH---FYLEDLAASVEIDLSKAKIT-------TGFFTENTIVVAEGEML 230 (418)
Q Consensus 180 ~~vlGml~~~~-~g~---~~LED~tG~I~Ldls~~~~~-------~g~~~~g~vV~veG~~~ 230 (418)
+.|-|-|.... .|+ +.|.|.+|.|++.++..... ...+..|++|.|+|...
T Consensus 67 V~v~Gwv~~~R~~gk~~F~~LrD~sg~iQvv~~~~~~~~~~~~~~~~~l~~g~~V~V~G~v~ 128 (504)
T 1e1o_A 67 VSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGDIIGARGTLF 128 (504)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTEEEEEEEETTTSSTTHHHHTGGGCCTTCEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCcEEEEEEECCeeEEEEEECCcCCHHHHHHHHhcCCCCCEEEEEEEEE
Confidence 56999998754 354 44899999999988643211 12357899999999985
No 78
>4gop_C Putative uncharacterized protein; OB fold, ssDNA binding, DNA binding protein-DNA complex; HET: DNA; 3.10A {Ustilago maydis}
Probab=32.01 E-value=50 Score=33.02 Aligned_cols=65 Identities=18% Similarity=0.244 Sum_probs=42.4
Q ss_pred ccceecccccCC-CCcE-EEEEEEEEcc---------CCc------EEEeeCCc-EEEEEeccccc---c-ceeeccCcE
Q 014802 165 CEISTIQSLVGQ-TGRR-WVMGVISQLE---------DGH------FYLEDLAA-SVEIDLSKAKI---T-TGFFTENTI 222 (418)
Q Consensus 165 ~~it~I~~Llg~-~g~~-~vlGml~~~~---------~g~------~~LED~tG-~I~Ldls~~~~---~-~g~~~~g~v 222 (418)
+.++||..|... .+.. -|+|+|.... +|+ +.|.|.|| +|++.+=+... . .....+|.|
T Consensus 119 ~~f~~i~~i~~~~~~~~vDViG~V~~v~~~~~i~~k~~g~~~~kr~i~L~D~sg~~i~~tLWg~~A~~f~~~~~~~~~~V 198 (444)
T 4gop_C 119 YEFVRINELESVEANQQCDVIGILDSYGELSEIVSKASQRPVQKRELTLVDQGNRSVKLTLWGKTAETFPTNAGVDEKPV 198 (444)
T ss_dssp CCBCCGGGGGGSCSSCCCBEEEEEEEECCCEEECCTTTCSCEEEEEEEEECTTCBEEEEEEEHHHHHTSTTSTTSSSCCE
T ss_pred ecccCHHHHhccCCCCceEEEEEEEEcCCcEEEEEccCCceeeEEEEEEEeCCCCEEEEEEEhhhhhhhhhhhccCCCCE
Confidence 567777777643 2333 3899988742 342 66999999 89998754321 1 122567889
Q ss_pred EEEEEEE
Q 014802 223 VVAEGEM 229 (418)
Q Consensus 223 V~veG~~ 229 (418)
|++.|..
T Consensus 199 V~i~~~k 205 (444)
T 4gop_C 199 LAFKGVK 205 (444)
T ss_dssp EEEESCE
T ss_pred EEEEeEE
Confidence 9888875
No 79
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=31.95 E-value=1.1e+02 Score=27.78 Aligned_cols=59 Identities=12% Similarity=0.227 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHH
Q 014802 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVT 70 (418)
Q Consensus 4 ~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~ 70 (418)
+.++.|...++..|+.+.++|+++|++..+ .+...+..+++.+... +..|+.+.+++++
T Consensus 165 ~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~----G~~r~~~~~l~~~~~~----~~~i~~~~v~~~~ 223 (319)
T 2chq_A 165 AMKKRLLEICEKEGVKITEDGLEALIYISG----GDFRKAINALQGAAAI----GEVVDADTIYQIT 223 (319)
T ss_dssp HHHHHHHHHHHTTCCCBCHHHHHHHHHTTT----TCHHHHHHHHHHHHHS----SSCBCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHcC----CCHHHHHHHHHHHHHc----CCCCCHHHHHHHH
Confidence 455666677788999999999999986432 2233333333333322 3356666665543
No 80
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=30.82 E-value=1.5e+02 Score=25.00 Aligned_cols=60 Identities=13% Similarity=0.076 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHH
Q 014802 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVT 70 (418)
Q Consensus 4 ~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~ 70 (418)
..++.+...++..|..+.+++++.|.+..+. ....+..+++..... ....|+.+.+++++
T Consensus 189 e~~~~l~~~~~~~~~~~~~~~~~~l~~~~~G----~~~~~~~~~~~~~~~---~~~~i~~~~v~~~~ 248 (250)
T 1njg_A 189 QIRHQLEHILNEEHIAHEPRALQLLARAAEG----SLRDALSLTDQAIAS---GDGQVSTQAVSAML 248 (250)
T ss_dssp HHHHHHHHHHHHTTCCBCHHHHHHHHHHHTT----CHHHHHHHHHHHHTT---TTSSBCHHHHHHHS
T ss_pred HHHHHHHHHHHhcCCCCCHHHHHHHHHHcCC----CHHHHHHHHHHHHhc---cCceecHHHHHHHh
Confidence 3445555566788999999999999886532 244455555444332 12378888887764
No 81
>2xgt_A Asparaginyl-tRNA synthetase, cytoplasmic; ligase, ATP-binding, protein biosynthesis; HET: NSS; 1.90A {Brugia malayi} PDB: 2xti_A*
Probab=30.06 E-value=1.1e+02 Score=30.66 Aligned_cols=53 Identities=17% Similarity=0.183 Sum_probs=37.5
Q ss_pred Cc-EEEEEEEEEccC-C-c---EEEeeCCcEEEEEeccccc---cceeeccCcEEEEEEEEe
Q 014802 178 GR-RWVMGVISQLED-G-H---FYLEDLAASVEIDLSKAKI---TTGFFTENTIVVAEGEML 230 (418)
Q Consensus 178 g~-~~vlGml~~~~~-g-~---~~LED~tG~I~Ldls~~~~---~~g~~~~g~vV~veG~~~ 230 (418)
|+ +.|-|-|....+ | + +.|.|.+|.|++.++.... ...-+..|++|.|+|...
T Consensus 11 ~~~V~v~Gwv~~~R~~Gk~~~Fi~LrD~~g~iQvv~~~~~~~~~~~~~l~~~~~v~v~G~v~ 72 (435)
T 2xgt_A 11 NERVCIKGWIHRMRRQGKSLMFFILRDGTGFLQVLLMDKLCQTYDALTVNTECTVEIYGAIK 72 (435)
T ss_dssp TSEEEEEEEEEEEEECTTSEEEEEEECSSCEEEEEEEGGGGSSHHHHHCCTTCEEEEEEEEE
T ss_pred CCEEEEEEEEEEecccCCCcEEEEEEECCceEEEEECCcchhHHHHhcCCCCCEEEEEEEEE
Confidence 44 569999987643 3 3 5589999999998863211 011357899999999974
No 82
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=29.85 E-value=1.4e+02 Score=32.43 Aligned_cols=53 Identities=19% Similarity=0.409 Sum_probs=41.0
Q ss_pred CCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceEEEecCCCCC
Q 014802 316 VPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDA 373 (418)
Q Consensus 316 ~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~v~vPG~~Dp 373 (418)
.|..|||.|-= .|. -+..+.+-..+..+|++|.+-|.+....+++|+|+-+..
T Consensus 564 ~p~q~If~GKA--~P~---y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vs 616 (796)
T 1l5w_A 564 VPRVFLFGAKA--APG---YYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVS 616 (796)
T ss_dssp CCEEEEEECCC--CTT---CHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHH
T ss_pred CCeEEEEEecC--Chh---HHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHH
Confidence 69999999961 121 123355667789999999999999888899999998764
No 83
>4h2g_A 5'-nucleotidase; dimer, hydrolase, phosphatase, extracellular; HET: ADN; 1.55A {Homo sapiens} PDB: 4h2f_A* 4h1y_P* 4h2i_A* 4h1s_A* 4h2b_A*
Probab=29.44 E-value=25 Score=36.30 Aligned_cols=47 Identities=9% Similarity=0.069 Sum_probs=30.0
Q ss_pred CCcEEEEEcccc--CcHH--------------HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCC
Q 014802 283 NDMFVILSDIWL--DNEE--------------VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP 330 (418)
Q Consensus 283 ~~~~v~lSDv~l--d~~~--------------~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~ 330 (418)
+-.|+.+||+|- .... -+.++..++..+... .+...++.+||++++.
T Consensus 25 ~l~Il~~nD~Hg~~~~~~~~~~~~~~~~~~~gG~a~l~~~i~~~r~~-~~~~l~l~~GD~~~g~ 87 (546)
T 4h2g_A 25 ELTILHTNDVHSRLEQTSEDSSKCVDASRCMGGVARLFTKVQQIRRA-EPNVLLLDAGDQYQGT 87 (546)
T ss_dssp EEEEEEECCCTTCCSCBCTTSSBCSSGGGCBCCHHHHHHHHHHHHHH-CSSEEEEECSCCSSSS
T ss_pred EEEEEEecccccCCcccccccccccccccccCCHHHHHHHHHHHHhh-CCCEEEEECCccCCCc
Confidence 356788999993 2210 145666666666442 2447889999998763
No 84
>3bju_A Lysyl-tRNA synthetase; aminoacyl-tRNA synthetase, ATP- binding, cytoplasm, ligase, nucleotide-binding, phosphoprotein, polymorphism; HET: LYS ATP; 2.31A {Homo sapiens}
Probab=29.41 E-value=1.1e+02 Score=31.37 Aligned_cols=52 Identities=13% Similarity=0.173 Sum_probs=38.0
Q ss_pred cEEEEEEEEEcc-CC-c---EEEeeCCcEEEEEeccccc-c-------ceeeccCcEEEEEEEEe
Q 014802 179 RRWVMGVISQLE-DG-H---FYLEDLAASVEIDLSKAKI-T-------TGFFTENTIVVAEGEML 230 (418)
Q Consensus 179 ~~~vlGml~~~~-~g-~---~~LED~tG~I~Ldls~~~~-~-------~g~~~~g~vV~veG~~~ 230 (418)
++.|-|-|.... -| + +.|.|.+|.|++.++.... . ...+..|++|.|+|...
T Consensus 57 ~V~v~Grv~~~R~~gkk~~F~~LrD~sg~iQvv~~~~~~~~~~~~~~~~~~l~~gd~V~V~G~v~ 121 (521)
T 3bju_A 57 TLKVAGRIHAKRASGGKLIFYDLRGEGVKLQVMANSRNYKSEEEFIHINNKLRRGDIIGVQGNPG 121 (521)
T ss_dssp CEEEEEEEEEEEESSSSEEEEEEEETTEEEEEEEEGGGSSCHHHHHHHHHHCCTTCEEEEEEEEE
T ss_pred EEEEEEEEEEEecCCCCcEEEEEEECCEEEEEEEECCccCCHHHHHHHHhcCCCCCEEEEEEEEE
Confidence 367999997754 46 4 4599999999998864321 1 12367899999999975
No 85
>2kxe_A DNA polymerase II small subunit; D-family, archara, helical BU transferase; HET: DNA; NMR {Pyrococcus horikoshii}
Probab=29.34 E-value=1.7e+02 Score=21.50 Aligned_cols=57 Identities=21% Similarity=0.234 Sum_probs=40.6
Q ss_pred HHHHHHHHcCCccCHHHHHHHHHhhcc-CCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHHHH
Q 014802 8 KIQKKMKIRGYGLRMDALDEILSFVNR-FPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSV 72 (418)
Q Consensus 8 ~I~~~Fk~~Gl~l~~dAl~~l~~~~~~-~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~ 72 (418)
+.++..-+.|+.|+|.|.-.|.++..+ .+. +-.|+ ..+|. -.+.+||....++.++.
T Consensus 6 elVk~L~~n~YLiTPsAYyLL~~~ykkg~Fs-----L~ELi-KFAks--rgtFvId~~lA~EFL~~ 63 (75)
T 2kxe_A 6 EFVKGLMKNGYLITPSAYYLLVGHFNEGKFS-----LIELI-KFAKS--RETFIIDDEIANEFLKS 63 (75)
T ss_dssp HHHHHHHTTTCEECHHHHHHHHHHHHTTSSC-----HHHHH-HHHHH--HTCSEECHHHHHHHHHH
T ss_pred HHHHHHHHCCceeCchHHHHHHHHhhccccc-----HHHHH-HHHHh--cCcEEechHHHHHHHHh
Confidence 578888999999999999999997776 222 33333 23443 45788898877777654
No 86
>3zth_A STU0660; DNA binding, crispr, CAS; 2.40A {Streptococcus thermophilus}
Probab=29.28 E-value=2e+02 Score=27.72 Aligned_cols=74 Identities=22% Similarity=0.351 Sum_probs=49.4
Q ss_pred EEccccCcHHHHHHHHHHHhcccCCCCCCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceEEEec
Q 014802 289 LSDIWLDNEEVMGKLEVVLDGFESVEVVPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIP 368 (418)
Q Consensus 289 lSDv~ld~~~~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~v~vP 368 (418)
+|.=|+++.+-+--|-.|++...+....|..+ +.-|. +. .-++.+|.+.|.++..+-.++|++ .|+|-|
T Consensus 170 Is~E~vsn~ekl~~fL~mL~~~ls~~t~k~LL-V~kNi-D~-----~Ls~~sy~~i~~~~~~ls~k~~nl----~fi~fp 238 (350)
T 3zth_A 170 LSFEWVSNIDKLSLFLEMLDHLLSQTTEKYLI-VLKNI-DG-----FISEESYTIFYRQICHLVKKYPNL----TFILFP 238 (350)
T ss_dssp ECGGGSCHHHHHHHHHHHHHHHHTTCCSCEEE-EEESC-GG-----GSCHHHHHHHHHHHHHHHHHCTTE----EEEEEC
T ss_pred cChhhhccHHHHHHHHHHHHHHHhcCCCcEEE-EEeCH-HH-----hhcHHHHHHHHHHHHHHHhhCCCe----EEEEEe
Confidence 46667787766555555666654433234444 44442 11 124578889999999988899986 999999
Q ss_pred CCCCC
Q 014802 369 GPDDA 373 (418)
Q Consensus 369 G~~Dp 373 (418)
++.=+
T Consensus 239 S~egY 243 (350)
T 3zth_A 239 SDQGY 243 (350)
T ss_dssp CSSSC
T ss_pred cCCCc
Confidence 98776
No 87
>3kf6_A Protein STN1; OB fold, chromosomal protein, DNA-binding, nucleus, telomere; 1.65A {Schizosaccharomyces pombe}
Probab=29.27 E-value=84 Score=27.04 Aligned_cols=51 Identities=12% Similarity=0.216 Sum_probs=35.4
Q ss_pred EEEEEEEEEccC--C--cEEEeeCCc-EEEEEecccc-c-c---ceeeccCcEEEEEEEEe
Q 014802 180 RWVMGVISQLED--G--HFYLEDLAA-SVEIDLSKAK-I-T---TGFFTENTIVVAEGEML 230 (418)
Q Consensus 180 ~~vlGml~~~~~--g--~~~LED~tG-~I~Ldls~~~-~-~---~g~~~~g~vV~veG~~~ 230 (418)
+.|+|+|....+ . .|.|.|.|| .|++..-... . . ..-+..|.+|=|.|...
T Consensus 50 V~IvGiVv~~~~~~~~~~ytIDD~TG~~I~cv~w~~~~~~~~~~~~~l~~G~~VrV~G~v~ 110 (159)
T 3kf6_A 50 IQIVGYIAAIDIYEGKHVLTVDDCSGMVLRVVFIIQDDFSMSKRAISMSPGNVVCVFGKIN 110 (159)
T ss_dssp EEEEEEEEEEEEETTEEEEEEECSSSCEEEEEEEGGGCHHHHHHHTTCCTTCEEEEEEEEE
T ss_pred EEEEEEEEEEEEeCCEEEEEEecCCCCeEEEEEEccCCCCcccccccCCCCCEEEEEEEEE
Confidence 458999988643 2 377999999 4888654322 1 0 11256899999999985
No 88
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=29.17 E-value=1.8e+02 Score=23.91 Aligned_cols=68 Identities=15% Similarity=0.151 Sum_probs=46.7
Q ss_pred CChHHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHHHHHHH
Q 014802 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVTSVLLQ 75 (418)
Q Consensus 1 m~~~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~~~~~~ 75 (418)
|.+.....+.+.++.+|+-+++-=.+.|.-+...... -.++.|.+.+.+. ..-++...|=+.++.+.+
T Consensus 1 ~~~~~~~~~~~~l~~~g~r~T~qR~~Il~~L~~~~~~---~sa~ei~~~l~~~----~~~is~aTVYR~L~~L~e 68 (145)
T 2fe3_A 1 MAAHELKEALETLKETGVRITPQRHAILEYLVNSMAH---PTADDIYKALEGK----FPNMSVATVYNNLRVFRE 68 (145)
T ss_dssp ---CHHHHHHHHHHHTTCCCCHHHHHHHHHHHHCSSC---CCHHHHHHHHGGG----CTTCCHHHHHHHHHHHHH
T ss_pred CchhHHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCC---CCHHHHHHHHHHh----CCCCChhhHHHHHHHHHH
Confidence 6666667788889999999998877777655443211 2356677777665 566788888888888776
No 89
>3ive_A Nucleotidase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: CTN; 1.70A {Escherichia coli O6} PDB: 3ivd_A*
Probab=28.32 E-value=15 Score=37.50 Aligned_cols=45 Identities=9% Similarity=0.228 Sum_probs=25.1
Q ss_pred CcEEEEEcccc--CcH------------HHHHHHHHHHhcccCCCCCCeEEEE-EcCCCCCC
Q 014802 284 DMFVILSDIWL--DNE------------EVMGKLEVVLDGFESVEVVPSLFVF-MGNFCSHP 330 (418)
Q Consensus 284 ~~~v~lSDv~l--d~~------------~~l~~L~~l~~~~~~~~~~p~~~Vl-~Gnf~s~~ 330 (418)
-.|+.+||+|- ... --+.++..++...... .|..+++ +||+++++
T Consensus 7 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~gG~a~la~~i~~~r~~--~~~~llldaGD~~~g~ 66 (509)
T 3ive_A 7 VTIIYTNDLHAHVEPYKVPWIADGKRDIGGWANITTLVKQEKAK--NKATWFFDAGDYFTGP 66 (509)
T ss_dssp EEEEEECCCTTCCSCBCCTTSGGGTSCBCCHHHHHHHHHHHHHH--CSSEEEEECSCCSSSS
T ss_pred EEEEEEccccCCccCcccccccCCCcCcCCHHHHHHHHHHHHhc--CCCeEEEECCCCCCCc
Confidence 45777888881 110 0145566666555432 2444444 99988764
No 90
>3a74_A Lysyl-tRNA synthetase; aminoacyl tRNA synthetase, ligase, protein biosynthesis, AMI tRNA synthetase, ATP-binding, magnesium; HET: B4P LYN; 1.80A {Geobacillus stearothermophilus} PDB: 3e9h_A* 3e9i_A*
Probab=27.21 E-value=96 Score=31.66 Aligned_cols=51 Identities=20% Similarity=0.249 Sum_probs=37.3
Q ss_pred EEEEEEEEEcc-CCc---EEEeeCCcEEEEEeccccccc------eeeccCcEEEEEEEEe
Q 014802 180 RWVMGVISQLE-DGH---FYLEDLAASVEIDLSKAKITT------GFFTENTIVVAEGEML 230 (418)
Q Consensus 180 ~~vlGml~~~~-~g~---~~LED~tG~I~Ldls~~~~~~------g~~~~g~vV~veG~~~ 230 (418)
+.|-|-|.... .|+ +.|.|.+|.|++.++...... ..+..|++|.|+|...
T Consensus 59 V~v~Gwv~~~R~~gk~~F~~LrD~sg~iQvv~~~~~~~~~~~~~~~~l~~g~~v~V~G~v~ 119 (493)
T 3a74_A 59 VAVAGRIMTKRGMGKAGFAHIQDVTGQIQIYVRQDDVGEQQYELFKISDLGDIVGVRGTMF 119 (493)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHCCTTCEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCcEEEEEEECCEeEEEEEECCcCCHHHHHHHhcCCCCCEEEEEEEEE
Confidence 56999998754 354 448999999999886432111 2367899999999985
No 91
>4ex5_A Lysine--tRNA ligase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LYS; 2.40A {Burkholderia thailandensis}
Probab=26.57 E-value=1.1e+02 Score=31.58 Aligned_cols=51 Identities=16% Similarity=0.204 Sum_probs=37.4
Q ss_pred EEEEEEEEEcc-CCc---EEEeeCCcEEEEEeccccccc------eeeccCcEEEEEEEEe
Q 014802 180 RWVMGVISQLE-DGH---FYLEDLAASVEIDLSKAKITT------GFFTENTIVVAEGEML 230 (418)
Q Consensus 180 ~~vlGml~~~~-~g~---~~LED~tG~I~Ldls~~~~~~------g~~~~g~vV~veG~~~ 230 (418)
+.|-|-|.... -|+ +.|.|.+|.|++.++...... .-+..|++|.|+|...
T Consensus 89 V~v~GwV~~~R~~Gk~~Fi~LrD~sg~iQvv~~~~~~~~~~~~~~~~l~~gd~V~V~G~v~ 149 (529)
T 4ex5_A 89 VAIAGRMMLKRVMGKASFATVQDGSGQIQFFVTPADVGAETYDAFKKWDLGDIVAARGVLF 149 (529)
T ss_dssp EEEEEEEEEEEEETTEEEEEEECSSCEEEEEECHHHHCHHHHHHHHTCCTTCEEEEEEEEE
T ss_pred EEEEEEEEeeecCCCeEEEEEEeCCeeEEEEEECCcCCHHHHHHHhcCCCCCEEEEEEEEE
Confidence 56999987753 355 449999999999887532111 1367899999999975
No 92
>3nem_A Aspartyl-tRNA synthetase; rossmann fold, OB fold, ligase; HET: AMO ATP; 1.89A {Thermococcus kodakarensis} PDB: 3nel_A* 3nen_A 1b8a_A*
Probab=25.90 E-value=1.3e+02 Score=30.20 Aligned_cols=53 Identities=23% Similarity=0.339 Sum_probs=38.5
Q ss_pred Cc-EEEEEEEEEcc-CCc---EEEeeCCcEEEEEecccccc------ceeeccCcEEEEEEEEe
Q 014802 178 GR-RWVMGVISQLE-DGH---FYLEDLAASVEIDLSKAKIT------TGFFTENTIVVAEGEML 230 (418)
Q Consensus 178 g~-~~vlGml~~~~-~g~---~~LED~tG~I~Ldls~~~~~------~g~~~~g~vV~veG~~~ 230 (418)
|+ +.|-|-|.... -|+ +.|.|.+|.|++.++..... ..-+..|++|.|+|...
T Consensus 16 g~~V~v~Gwv~~~R~~g~~~Fi~LrD~~g~iQ~v~~~~~~~~~~~~~~~~l~~~~~V~V~G~v~ 79 (438)
T 3nem_A 16 GQKVKVAGWVWEVKDLGGIKFLWIRDRDGIVQITAPKKKVDPELFKLIPKLRSEDVVAVEGVVN 79 (438)
T ss_dssp TCEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEEETTTSCHHHHHHGGGCCTTCEEEEEEEEE
T ss_pred CCEEEEEEEEEEEecCCCeEEEEEEECCeeEEEEEeCCcCCHHHHHHHhcCCCCCEEEEEEEEE
Confidence 44 56899987753 355 34999999999988754211 12367899999999985
No 93
>3ztv_A NAD nucleotidase, NADN; hydrolase, NAD pyrophosphatase, NMN nucleotidase, periplasmi enzyme, CD73; HET: ADN; 1.30A {Haemophilus influenzae} PDB: 3zu0_A*
Probab=25.39 E-value=38 Score=35.18 Aligned_cols=46 Identities=13% Similarity=0.169 Sum_probs=28.7
Q ss_pred CcEEEEEccc--cCcHH---------------HHHHHHHHHhcccCCCCCCeEEEEEcCCCCCC
Q 014802 284 DMFVILSDIW--LDNEE---------------VMGKLEVVLDGFESVEVVPSLFVFMGNFCSHP 330 (418)
Q Consensus 284 ~~~v~lSDv~--ld~~~---------------~l~~L~~l~~~~~~~~~~p~~~Vl~Gnf~s~~ 330 (418)
-.|+.+||+| +.... -+.++..++..+... .+...++..||++++.
T Consensus 13 l~Il~tnD~Hg~~~~~~~~~~~~~~~~~~~~gG~arla~~i~~~r~~-~~~~l~l~~GD~~~gs 75 (579)
T 3ztv_A 13 LSILHINDHHSYLEPHETRINLNGQQTKVDIGGFSAVNAKLNKLRKK-YKNPLVLHAGDAITGT 75 (579)
T ss_dssp EEEEEECCCTTCCSCEEEEEEETTEEEEEEECCHHHHHHHHHHHHHH-SSSEEEEECSCCSCSS
T ss_pred EEEEEeCccccCccCCccccccCCcccccccCCHHHHHHHHHHHHhh-CCCEEEEeCCCCCCCc
Confidence 4577789998 33321 155666666665432 2456788889998764
No 94
>1jmc_A Protein (replication protein A (RPA)); human ssDNA binding replication protein A(RPA), single stranded DNA-binding protein, protein-ssDNA complex; HET: DNA; 2.40A {Homo sapiens} SCOP: b.40.4.3 b.40.4.3 PDB: 1fgu_A
Probab=24.41 E-value=1e+02 Score=27.66 Aligned_cols=64 Identities=11% Similarity=0.134 Sum_probs=41.3
Q ss_pred ccceecccccCCCCcEEEEEEEEEc----------cCC---cEEEeeCCcEEEEEeccccc--cceeeccCcEEEEEEE
Q 014802 165 CEISTIQSLVGQTGRRWVMGVISQL----------EDG---HFYLEDLAASVEIDLSKAKI--TTGFFTENTIVVAEGE 228 (418)
Q Consensus 165 ~~it~I~~Llg~~g~~~vlGml~~~----------~~g---~~~LED~tG~I~Ldls~~~~--~~g~~~~g~vV~veG~ 228 (418)
..+++|+.|--......|.|.+... .+| .+.|-|++|+|+..+-+... -...+.+|.++.+.+-
T Consensus 6 ~~~~~I~~L~p~~~~w~I~~rV~~k~~~r~~~~~~~~g~~~~~~L~De~G~I~at~~~~~~~~~~~~l~~G~vy~i~~~ 84 (246)
T 1jmc_A 6 SKVVPIASLTPYQSKWTICARVTNKSQIRTWSNSRGEGKLFSLELVDESGEIRATAFNEQVDKFFPLIEVNKVYYFSKG 84 (246)
T ss_dssp -CBCCGGGCCTTCCCCEEEEEEEEECCCEEEECSSCEEEEEEEEEECSSCEEEEEEEHHHHHHHGGGCCTTCEEEEECC
T ss_pred cceEEHHHCCCCCCceEEEEEEEEecccceeeCCCCCceEEEEEEECCCCeEEEEEChHHHHHhhhhcccCCEEEECCC
Confidence 3688899883222334577777753 134 35699999999887654321 1356789998887774
No 95
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=24.38 E-value=1.8e+02 Score=27.19 Aligned_cols=65 Identities=12% Similarity=0.091 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhc-cCCCcccccHHHHHHHHHH
Q 014802 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHE-SSLKSSIIDKESVNRVTSV 72 (418)
Q Consensus 5 ~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~-~~~~~~~vd~~~~~~~~~~ 72 (418)
.++.+...++..|+.+.++++++|+++... |. ...+..+++..... .......|+.+.++++++.
T Consensus 264 ~~~il~~~~~~~~~~~~~~~l~~l~~~~~~--G~-~r~~~~ll~~a~~~A~~~~~~~It~~~v~~a~~~ 329 (368)
T 3uk6_A 264 TKQILRIRCEEEDVEMSEDAYTVLTRIGLE--TS-LRYAIQLITAASLVCRKRKGTEVQVDDIKRVYSL 329 (368)
T ss_dssp HHHHHHHHHHHTTCCBCHHHHHHHHHHHHH--SC-HHHHHHHHHHHHHHHHHTTCSSBCHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHHHhcC--CC-HHHHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Confidence 344444566888999999999999987653 22 22233333222111 0134668999999998875
No 96
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=24.09 E-value=1.2e+02 Score=33.04 Aligned_cols=53 Identities=8% Similarity=0.220 Sum_probs=41.0
Q ss_pred CCeEEEEEcCCCCCCCCCCCcchHHHHHHHHHHHHHHhcCCCccccceEEEecCCCCC
Q 014802 316 VPSLFVFMGNFCSHPCNLSFHSFSSLRLQFGKLGQMIAAHPRLKEHSRFLFIPGPDDA 373 (418)
Q Consensus 316 ~p~~~Vl~Gnf~s~~~~~~~~~~~~~~~~f~~La~~l~~~p~l~~~~~~v~vPG~~Dp 373 (418)
.|..|||.|-= .|. -+..+.+-..+..+|++|.+-|.+....+++|+|+-+..
T Consensus 554 ~p~q~If~GKA--~P~---y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vs 606 (796)
T 2c4m_A 554 PARTVIFGAKA--APG---YVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVS 606 (796)
T ss_dssp CCEEEEEECCC--CTT---CHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHH
T ss_pred CCeEEEEEecC--CHh---HHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHH
Confidence 68999999961 121 123355666789999999999999888999999998764
No 97
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=23.99 E-value=1.6e+02 Score=27.68 Aligned_cols=65 Identities=14% Similarity=0.121 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccC-CCcccccHHHHHHHHHHH
Q 014802 5 TRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESS-LKSSIIDKESVNRVTSVL 73 (418)
Q Consensus 5 ~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~-~~~~~vd~~~~~~~~~~~ 73 (418)
+.+.|.+..+..|+.+..+++++|++.. .| +...+..+++.+...+. .....|+.+.++++++.+
T Consensus 185 l~~iL~~~~~~~~~~~~~~~~~~ia~~~---~G-~~R~a~~ll~~~~~~a~~~~~~~It~~~v~~al~~~ 250 (334)
T 1in4_A 185 LKEIIKRAASLMDVEIEDAAAEMIAKRS---RG-TPRIAIRLTKRVRDMLTVVKADRINTDIVLKTMEVL 250 (334)
T ss_dssp HHHHHHHHHHHTTCCBCHHHHHHHHHTS---TT-CHHHHHHHHHHHHHHHHHHTCSSBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCcCHHHHHHHHHhc---CC-ChHHHHHHHHHHHHHHHHcCCCCcCHHHHHHHHHHh
Confidence 3333444446789999999999998732 22 23444455544433211 124478999999988764
No 98
>2dgy_A MGC11102 protein; EIF-1A, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.60 E-value=1.9e+02 Score=23.23 Aligned_cols=45 Identities=2% Similarity=0.049 Sum_probs=30.9
Q ss_pred EEEEEEEc-cCCcEEEeeCCcEEEE-Eeccccccc-eeeccCcEEEEEE
Q 014802 182 VMGVISQL-EDGHFYLEDLAASVEI-DLSKAKITT-GFFTENTIVVAEG 227 (418)
Q Consensus 182 vlGml~~~-~~g~~~LED~tG~I~L-dls~~~~~~-g~~~~g~vV~veG 227 (418)
++|.+... .++.|.++.++|...| .++.. +.. =.+.+|++|+|+=
T Consensus 17 ~~g~V~~~lgn~~f~V~l~nG~~~la~i~GK-~Rk~IwI~~GD~VlVe~ 64 (111)
T 2dgy_A 17 QIVRVLRTPGNNLHEVETAQGQRFLVSMPSK-YRKNIWIKRGDFLIVDP 64 (111)
T ss_dssp EEEEEEECCSSSEEEEECTTSCEEEEECCTT-CCSCCCCCSSCEEEEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCCEEEEEechh-hcccEEEcCCCEEEEEe
Confidence 56666664 6778899999996555 55543 333 3457999999973
No 99
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=23.57 E-value=59 Score=24.11 Aligned_cols=34 Identities=6% Similarity=0.136 Sum_probs=29.7
Q ss_pred CChHHHHHHHHHHHHcCCccCHHHHHHHHHhhcc
Q 014802 1 MSGQTRKKIQKKMKIRGYGLRMDALDEILSFVNR 34 (418)
Q Consensus 1 m~~~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~ 34 (418)
|.+.++++|....+.+|.++..+....|.+.+..
T Consensus 26 lP~eL~~~L~~~A~~~grSlNaeIv~~Le~sl~~ 59 (69)
T 3qoq_A 26 LPEGMREQIAEVARSHHRSMNSEIIARLEQSLLQ 59 (69)
T ss_dssp CCTTHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 4567899999999999999999999999987764
No 100
>1x54_A Asparaginyl-tRNA synthetase; aminoacyl-tRNA synthetase, riken structural genomics/proteom initiative, RSGI, structural genomics, ligase; HET: 4AD; 1.45A {Pyrococcus horikoshii} PDB: 1x55_A* 1x56_A
Probab=23.40 E-value=97 Score=31.00 Aligned_cols=53 Identities=17% Similarity=0.280 Sum_probs=38.3
Q ss_pred Cc-EEEEEEEEEccC-Cc---EEEeeCCcEEEEEecccccc------ceeeccCcEEEEEEEEe
Q 014802 178 GR-RWVMGVISQLED-GH---FYLEDLAASVEIDLSKAKIT------TGFFTENTIVVAEGEML 230 (418)
Q Consensus 178 g~-~~vlGml~~~~~-g~---~~LED~tG~I~Ldls~~~~~------~g~~~~g~vV~veG~~~ 230 (418)
|+ +.|-|-|....+ |+ +.|.|.+|.|++.++..... ...+..|++|.|+|...
T Consensus 16 ~~~V~v~G~v~~~R~~g~~~F~~lrD~~g~iQ~v~~~~~~~~~~~~~~~~l~~~~~v~v~G~v~ 79 (434)
T 1x54_A 16 GKKVRLAGWVYTNMRVGKKIFLWIRDSTGIVQAVVAKNVVGEETFEKAKKLGRESSVIVEGIVK 79 (434)
T ss_dssp TCEEEEEEEEEEEEEETTEEEEEEEETTEEEEEEECHHHHCHHHHHHHHTCCTTCEEEEEEEEE
T ss_pred CCEEEEEEEEEEEecCCCeEEEEEEECCEEEEEEEECCcCCHHHHHHHhcCCCCCEEEEEEEEE
Confidence 44 569999987543 55 44899999999988642111 12467899999999985
No 101
>4ah6_A Aspartate--tRNA ligase, mitochondrial; 3.70A {Homo sapiens}
Probab=23.11 E-value=1.1e+02 Score=32.21 Aligned_cols=53 Identities=15% Similarity=0.224 Sum_probs=39.8
Q ss_pred Cc-EEEEEEEEEccCCc-EEEeeCCcEEEEEecccccc------ceeeccCcEEEEEEEEe
Q 014802 178 GR-RWVMGVISQLEDGH-FYLEDLAASVEIDLSKAKIT------TGFFTENTIVVAEGEML 230 (418)
Q Consensus 178 g~-~~vlGml~~~~~g~-~~LED~tG~I~Ldls~~~~~------~g~~~~g~vV~veG~~~ 230 (418)
|+ +.|-|-|....++. +.|.|.+|.|++.++..... ..-+..|++|.|+|...
T Consensus 24 g~~V~l~GwV~~~R~~~Fi~LrD~~g~iQvv~~~~~~~~~~~~~~~~l~~e~~V~V~G~v~ 84 (617)
T 4ah6_A 24 GQEVTLCGWIQYRRQNTFLVLRDFDGLVQVIIPQDESAASVKKILCEAPVESVVQVSGTVI 84 (617)
T ss_dssp TCEEEEEEEECCCCTTTEEEEECSSCEEEEECCCSSSSHHHHHHHHHCCSSCEEEEEEEEE
T ss_pred CCEEEEEEEeeeecCeEEEEEEeCCcCEEEEEeCCcCcHHHHHHHhcCCCCCEEEEEEEEE
Confidence 44 56999998877766 44999999999988754211 12357899999999974
No 102
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=22.14 E-value=1.2e+02 Score=28.29 Aligned_cols=60 Identities=13% Similarity=0.076 Sum_probs=36.4
Q ss_pred HHHHHHHHHHHHcCCccCHHHHHHHHHhhccCCCChHHHHHHHHHHHhhccCCCcccccHHHHHHHH
Q 014802 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVNRFPDAEDEAIDLLLDQFEHESSLKSSIIDKESVNRVT 70 (418)
Q Consensus 4 ~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~~~~~~~~~~l~~ll~~i~k~~~~~~~~vd~~~~~~~~ 70 (418)
..++.+.+.++..|+.+.++|++.|++..+. +...+..+++..... ....|+.+.+++++
T Consensus 182 ~~~~~l~~~~~~~~~~~~~~a~~~l~~~~~G----~~r~~~~~l~~~~~~---~~~~i~~~~v~~~~ 241 (373)
T 1jr3_A 182 QIRHQLEHILNEEHIAHEPRALQLLARAAEG----SLRDALSLTDQAIAS---GDGQVSTQAVSAML 241 (373)
T ss_dssp HHHHHHHHHHHHHTCCBCHHHHHHHHHHSSS----CHHHHHHHHHHHHHH---TTTCBCHHHHHHHT
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHHHCCC----CHHHHHHHHHHHHHh---cCCcccHHHHHHHh
Confidence 4556666777889999999999999885432 233333333333221 12346766666553
No 103
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=22.05 E-value=94 Score=28.90 Aligned_cols=30 Identities=10% Similarity=0.093 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHHcCCccCHHHHHHHHHhhc
Q 014802 4 QTRKKIQKKMKIRGYGLRMDALDEILSFVN 33 (418)
Q Consensus 4 ~~~~~I~~~Fk~~Gl~l~~dAl~~l~~~~~ 33 (418)
..++.+.+.++..|+.+.++++++|++..+
T Consensus 196 ~~~~~l~~~~~~~~~~i~~~~l~~l~~~~~ 225 (353)
T 1sxj_D 196 NAIDRLRFISEQENVKCDDGVLERILDISA 225 (353)
T ss_dssp HHHHHHHHHHHTTTCCCCHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHcC
Confidence 456666677788999999999999998654
No 104
>1wyd_A Hypothetical aspartyl-tRNA synthetase; archaea, LIGA; HET: EPE; 2.30A {Sulfolobus tokodaii}
Probab=20.91 E-value=1.5e+02 Score=29.62 Aligned_cols=51 Identities=18% Similarity=0.240 Sum_probs=37.5
Q ss_pred EEEEEEEEEccC-Cc---EEEeeCCcEEEEEecccc--cc-ceeeccCcEEEEEEEEe
Q 014802 180 RWVMGVISQLED-GH---FYLEDLAASVEIDLSKAK--IT-TGFFTENTIVVAEGEML 230 (418)
Q Consensus 180 ~~vlGml~~~~~-g~---~~LED~tG~I~Ldls~~~--~~-~g~~~~g~vV~veG~~~ 230 (418)
+.|-|-|....+ |+ +.|.|.+|.|++.++... +. ...+..|++|.|+|...
T Consensus 19 V~v~Gwv~~~R~~g~~~F~~lrD~~g~iQ~v~~~~~~~~~~~~~l~~~~~v~v~G~v~ 76 (429)
T 1wyd_A 19 VIWAGWVHLLRDLGGKKFIILRDKTGLGQVVVDKNSSAFGISQELTQESVIQVRGIVK 76 (429)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEETTEEEEEEECTTSTTHHHHTTCCTTCEEEEEEEEE
T ss_pred EEEEEEEEEEecCCCeEEEEEEECCeeEEEEEeCChHHHHHHHhCCCCCEEEEEEEEE
Confidence 569999987543 54 448999999999886431 11 13467899999999985
Done!