BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014805
(418 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255576147|ref|XP_002528968.1| zinc finger protein, putative [Ricinus communis]
gi|223531614|gb|EEF33442.1| zinc finger protein, putative [Ricinus communis]
Length = 456
Score = 592 bits (1525), Expect = e-166, Method: Compositional matrix adjust.
Identities = 297/448 (66%), Positives = 341/448 (76%), Gaps = 40/448 (8%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
RQVKSNAV+NQS DNIEEAIWRLKIHDNQE GG+A +SPYP RPGEPDC++Y RTGLCGY
Sbjct: 12 RQVKSNAVSNQSPDNIEEAIWRLKIHDNQEQGGMAPSSPYPDRPGEPDCVYYLRTGLCGY 71
Query: 65 GSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
G+NCRFNHP YAAQG Q++EELPER GQPDCGYYLKTGTCKYGSTCKYHHP+DRNGAGPV
Sbjct: 72 GNNCRFNHPPYAAQGNQFKEELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDRNGAGPV 131
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 184
SFNI+GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP+ LGT LP TG A+ G M SS
Sbjct: 132 SFNIVGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPAPLGTGLPFTGPAASGPMASSN 191
Query: 185 LPSSGLQYA----------------------------------GIVPAPGWNTYMGNIGP 210
LPSSGL Y G+V A GWNTY+GN+ P
Sbjct: 192 LPSSGLPYVGGLPTWSLPRAPYVSGPRLQGPQTYMPAVLSPSQGVVAAQGWNTYVGNLSP 251
Query: 211 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
+S S+ GS+++Y+SRNQ + G+ Q+H+LS +S NLPERPDQP+CRY+MNTGTCKYG+D
Sbjct: 252 MSSGSVLGSSIVYNSRNQSESGSSGQVHMLSTTSSNLPERPDQPECRYFMNTGTCKYGSD 311
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 330
CK+HHPKERIAQ A ++IGP+GLPSRPGQ ICSNYSMYG+CKFGPTCRFDHP+ GYP Y
Sbjct: 312 CKYHHPKERIAQLATNSIGPVGLPSRPGQPICSNYSMYGLCKFGPTCRFDHPFTGYPYGY 371
Query: 331 GLSLPPLSILDSSLMNHQAIS-ATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNST 389
LSL PLSI+DSSL+++ +S S E+ SSK P+WVQN D S +HQN D
Sbjct: 372 SLSLQPLSIIDSSLLSYPRMSPPALSSESPISLSSKFPDWVQNPDGASSKHQNSDR---N 428
Query: 390 TKNSDDSSKV--DHPPHSVPNCSEPPHD 415
TK SDD + PPHS SEP HD
Sbjct: 429 TKISDDQPEQAGSPPPHSSQASSEPSHD 456
>gi|224129058|ref|XP_002320490.1| predicted protein [Populus trichocarpa]
gi|222861263|gb|EEE98805.1| predicted protein [Populus trichocarpa]
Length = 446
Score = 582 bits (1501), Expect = e-164, Method: Compositional matrix adjust.
Identities = 294/454 (64%), Positives = 340/454 (74%), Gaps = 47/454 (10%)
Query: 1 MPD--NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRR 58
MPD NRQVKSNAV+NQSA+NIEEAIWRLKIHD+QE GG+AQ+SPYP RPG PDC +Y R
Sbjct: 1 MPDHNNRQVKSNAVSNQSAENIEEAIWRLKIHDHQEQGGMAQSSPYPDRPGAPDCGYYLR 60
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
TGLCGYGSNCRFNHP YAA GAQ REELPER GQPDCGYYLKTGTCKYGSTCKYHHP+DR
Sbjct: 61 TGLCGYGSNCRFNHPVYAALGAQLREELPERVGQPDCGYYLKTGTCKYGSTCKYHHPRDR 120
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
NGAGPVSFN LGLPMRQDEKSCPYYMRT SCKFGVACKFHHPQP+SLGT+ LTG A+ G
Sbjct: 121 NGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSFSLTGAAAFG 180
Query: 179 SMGSSVLPSSGLQYA----------------------------------GIVPAPGWNTY 204
S GS ++PSSGL Y GI+P PGWNTY
Sbjct: 181 STGSPIVPSSGLPYVGGLPTWSLPRAPLMSGTNLQGPQAYMPVVVSPSPGIIPVPGWNTY 240
Query: 205 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 264
+GN+ P+S +SI GSN Y SRNQGD G+G Q+H+LS S LPERP QP+CR++M+TGT
Sbjct: 241 VGNLNPMSSSSILGSNRAYDSRNQGDSGSGGQVHLLSTVSPILPERPGQPECRHFMSTGT 300
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
CKYG+DCK+HHPKERIAQ A + +G LGLPSRPGQA+C +YSMYGICKFGPTCR+DHP
Sbjct: 301 CKYGSDCKYHHPKERIAQLATNTMGLLGLPSRPGQAVCPDYSMYGICKFGPTCRYDHPIH 360
Query: 325 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV-QHQNP 383
YP NY LSLP LSI+DSSL+ + ++ + +P SK+P+ + N D S +HQNP
Sbjct: 361 TYPYNYSLSLPSLSIMDSSLITYPRMA-----QAAPVTLSKLPDLIHNPDGASYNKHQNP 415
Query: 384 DMKNSTTKNSDDSSKV--DHPPHSVPNCSEPPHD 415
D ++TK SDD ++ PPHS SEP HD
Sbjct: 416 D---TSTKISDDPTEQAGSPPPHSSQASSEPSHD 446
>gi|225447159|ref|XP_002275775.1| PREDICTED: zinc finger CCCH domain-containing protein 12 [Vitis
vinifera]
gi|297739220|emb|CBI28871.3| unnamed protein product [Vitis vinifera]
Length = 450
Score = 567 bits (1462), Expect = e-159, Method: Compositional matrix adjust.
Identities = 288/454 (63%), Positives = 340/454 (74%), Gaps = 40/454 (8%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M DNRQV+SN V+N S++N+EEAI RLKIHDNQE G V +SPYP RPGEPDC++Y RTG
Sbjct: 1 MLDNRQVQSNGVSNPSSENVEEAILRLKIHDNQEEGSVGHSSPYPDRPGEPDCIYYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
LCGYGSNCRFNHPAY+ QGAQYR ELPER GQPDCGY+LKTGTCKYGSTCKYHHP+DR+G
Sbjct: 61 LCGYGSNCRFNHPAYSEQGAQYRGELPERVGQPDCGYFLKTGTCKYGSTCKYHHPRDRHG 120
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM 180
AGPVS NI+GLPMRQ+EK C YYMRTG CKFG ACKFHHPQP+S GT LP TG A+ GS
Sbjct: 121 AGPVSLNIVGLPMRQEEKPCSYYMRTGLCKFGAACKFHHPQPASAGTVLPATGPAAFGST 180
Query: 181 GSSVLPSSGLQYA----------------------------------GIVPAPGWNTYMG 206
GSS+LPSSGL Y GIVPA GWNTYMG
Sbjct: 181 GSSILPSSGLPYVGGLPAWSLPRAPYIPGPRMQGPQTYMPIVLSPSQGIVPAQGWNTYMG 240
Query: 207 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
N+ P+S T I GSNL+Y+SRNQ + G+ Q+H+LS+ +LPERPDQP+CRY+M+TG+CK
Sbjct: 241 NMSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCK 300
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
YG+DCK+HHPKERIAQ A + +GPLGLP RPGQA+CS+Y++YG+CK+GPTC+FDHP GY
Sbjct: 301 YGSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGY 360
Query: 327 -PINYGLSLPPLSILDSSLMNHQAISAT-HSIETSPDASSKIPNWVQNSDAVSVQHQNPD 384
NY LSLPPLSILD SL+ +Q S+T HS ETSP SSK P+WVQ +++ S + QNPD
Sbjct: 361 SSYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPD 420
Query: 385 MKNSTTKNSDDSSKVDHPPHSVPNCSEPPHDQSN 418
K S + HS PN SEPP DQS+
Sbjct: 421 TKAPEGPPEQAGSLL----HSSPNSSEPPQDQSD 450
>gi|224068913|ref|XP_002302855.1| predicted protein [Populus trichocarpa]
gi|222844581|gb|EEE82128.1| predicted protein [Populus trichocarpa]
Length = 450
Score = 567 bits (1461), Expect = e-159, Method: Compositional matrix adjust.
Identities = 287/455 (63%), Positives = 333/455 (73%), Gaps = 45/455 (9%)
Query: 1 MPD--NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRR 58
MPD NRQVKSNAV+N SADNIEEA WRLKIHD QE GG+AQ+SPYP RPG PDC +Y R
Sbjct: 1 MPDQNNRQVKSNAVSNHSADNIEEAFWRLKIHDPQEQGGMAQSSPYPDRPGVPDCGYYLR 60
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
TGLCGYGSNCR+NHP YAAQG Q REELPER GQPDCGYY+KTGTCKYGSTCKYHHP+DR
Sbjct: 61 TGLCGYGSNCRYNHPIYAAQGTQLREELPERIGQPDCGYYIKTGTCKYGSTCKYHHPRDR 120
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
NGAGPVSFN LGLPMRQDEKSCPYYMRT SCKFGVACKFHHPQP+SLGT+LPLTG A+ G
Sbjct: 121 NGAGPVSFNALGLPMRQDEKSCPYYMRTRSCKFGVACKFHHPQPASLGTSLPLTGAAAFG 180
Query: 179 SMGSSVLPSSGLQYA-----------------------------------GIVPAPGWNT 203
S GS ++PSSGL Y GIVP PGWNT
Sbjct: 181 STGSPIVPSSGLPYVGGLPTWSLPRAPPYMSGTHLQGPQAYMPVVVSPSQGIVPVPGWNT 240
Query: 204 YMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG 263
Y+GN P+S +SI GSN Y SRN GD +G+ H+LS + LPERPDQP+CR++M++G
Sbjct: 241 YVGNSNPMSSSSILGSNRAYDSRNHGD--SGSSGHLLSTAIPALPERPDQPECRHFMSSG 298
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
TCKYG+DCK+HHPKERIAQ A + +GP GLP RPGQA+C +YSMYGICKFGPTCR+DHP
Sbjct: 299 TCKYGSDCKYHHPKERIAQLATNTMGPFGLPLRPGQAVCPDYSMYGICKFGPTCRYDHPL 358
Query: 324 AGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV-QHQN 382
YP NY LSLP LS++DSSL+ + ++ +P + SK+P+ ++N D S +HQN
Sbjct: 359 PTYPYNYSLSLPSLSMMDSSLVTYPRMAQAALSSATPVSLSKLPDLIRNPDGASYNKHQN 418
Query: 383 PDMKNSTTKNSDDSSK--VDHPPHSVPNCSEPPHD 415
D S TK DD ++ PPHS SEP HD
Sbjct: 419 SD---SNTKTLDDPTEHAGSPPPHSSQASSEPSHD 450
>gi|147819907|emb|CAN76191.1| hypothetical protein VITISV_020358 [Vitis vinifera]
Length = 460
Score = 499 bits (1285), Expect = e-139, Method: Compositional matrix adjust.
Identities = 263/453 (58%), Positives = 311/453 (68%), Gaps = 71/453 (15%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ 92
+E G V +SPYP RPGEPDC++Y RTGLCGYGSNCRFNHPAY+ QGAQYR ELPER GQ
Sbjct: 12 KEEGSVGHSSPYPDRPGEPDCIYYLRTGLCGYGSNCRFNHPAYSEQGAQYRGELPERVGQ 71
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFG 152
PDCGY+LKTGTCKYGSTCKYHHP+DR+GAGPV NI+GLPMRQ+EK C YYMRTG CKFG
Sbjct: 72 PDCGYFLKTGTCKYGSTCKYHHPRDRHGAGPVXLNIVGLPMRQEEKPCSYYMRTGLCKFG 131
Query: 153 VACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA------------------- 193
ACKFHHPQP+S GT LP TG A+ GS GSS+LPSSGL Y
Sbjct: 132 AACKFHHPQPASAGTVLPATGPAAFGSTGSSILPSSGLPYVGGLPAWSLPRAPYIPGPRM 191
Query: 194 ---------------GIVPAPGWNTYM-------------------------------GN 207
GIVPA GWNTYM GN
Sbjct: 192 QGPQTYMPIVLSPSQGIVPAQGWNTYMPHFLVLMKSFHVVNLVYSIDPNEFVICEIPRGN 251
Query: 208 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 267
+ P+S T I GSNL+Y+SRNQ + G+ Q+H+LS+ +LPERPDQP+CRY+M+TG+CKY
Sbjct: 252 MSPISSTGILGSNLVYNSRNQSESGSSGQVHLLSSLIPHLPERPDQPECRYFMSTGSCKY 311
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY- 326
G+DCK+HHPKERIAQ A + +GPLGLP RPGQA+CS+Y++YG+CK+GPTC+FDHP GY
Sbjct: 312 GSDCKYHHPKERIAQLATNTLGPLGLPLRPGQAVCSHYNLYGLCKYGPTCKFDHPLTGYS 371
Query: 327 PINYGLSLPPLSILDSSLMNHQAISAT-HSIETSPDASSKIPNWVQNSDAVSVQHQNPDM 385
NY LSLPPLSILD SL+ +Q S+T HS ETSP SSK P+WVQ +++ S + QNPD
Sbjct: 372 SYNYCLSLPPLSILDPSLLPYQRNSSTVHSSETSPSKSSKFPDWVQKTESGSTKSQNPDT 431
Query: 386 KNSTTKNSDDSSKVDHPPHSVPNCSEPPHDQSN 418
K S + HS PN SEPP DQS+
Sbjct: 432 KAPEGPPEQAGSLL----HSSPNSSEPPQDQSD 460
>gi|449450892|ref|XP_004143196.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus]
gi|449515163|ref|XP_004164619.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Cucumis sativus]
Length = 430
Score = 464 bits (1195), Expect = e-128, Method: Compositional matrix adjust.
Identities = 243/447 (54%), Positives = 299/447 (66%), Gaps = 48/447 (10%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MPDN QV+ N V NQS D I EA+WRL+I DNQ+GG A++SPYP RPGEPDCL+Y RTG
Sbjct: 1 MPDNLQVQRNDVPNQSPD-ISEALWRLEISDNQDGGDAAESSPYPDRPGEPDCLYYMRTG 59
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
C YGSNCRFNHP Y QGA Y ELPER GQPDC Y+LKTGTCKYG +CKYHHP+DR G
Sbjct: 60 SCSYGSNCRFNHPVYVGQGALYNGELPERIGQPDCEYFLKTGTCKYGGSCKYHHPRDRRG 119
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM 180
AGPV+FNILGLPMRQ+EKSCPYY+RTGSCKFGV+CKF+HPQPS +G LP +LGS
Sbjct: 120 AGPVTFNILGLPMRQEEKSCPYYLRTGSCKFGVSCKFNHPQPSPVGNMLPQARPGALGSG 179
Query: 181 GSSVLPSSGLQY------------------------------AGIVPAPGWNTYMGNIGP 210
G+ +PSSG+ Y G + A WNTY+ N+ P
Sbjct: 180 GTPFMPSSGVPYPAWSMPRVQYMPGPCVQGQQSYVPVLVSPSQGAIAAQDWNTYVSNVNP 239
Query: 211 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
+ P NL Y++ N D + Q+ LS S+ LP+RPDQP+CRY+MN GTCKYG+D
Sbjct: 240 ILP------NLGYNNINLEDSYSNGQL-ALSTSTPTLPDRPDQPECRYFMNNGTCKYGSD 292
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 330
CKFHHPK+RIAQSA + LGLPSRPGQAICS Y+MYG+CK+GP+C+FDHP YP NY
Sbjct: 293 CKFHHPKQRIAQSATNA---LGLPSRPGQAICSYYNMYGLCKYGPSCKFDHPSPTYPYNY 349
Query: 331 GLSLPPLSILDSSLMNHQAISATHSI-ETSPDASSKIPNWVQNSDAVSVQHQNPDMKNST 389
G +LP +LDSS++ + + + T S ET P SK WVQ +D + + + D K
Sbjct: 350 GFTLP---LLDSSIIKYPSNNFTMSSHETLPGTVSKSSEWVQKADPSNNKRRTTDSKVII 406
Query: 390 TKNSDDSSKVDHPPHSVPNCSEPPHDQ 416
++++ V S+P SE DQ
Sbjct: 407 DSTGEEATSVS---CSLPGGSESLQDQ 430
>gi|356554539|ref|XP_003545603.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 417
Score = 447 bits (1149), Expect = e-123, Method: Compositional matrix adjust.
Identities = 239/447 (53%), Positives = 288/447 (64%), Gaps = 62/447 (13%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MP+NRQV NA S+DNIEEAI RLKI+DN + AQ++ YP RPGEP+CL+Y RTG
Sbjct: 1 MPENRQVLRNA---DSSDNIEEAIRRLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTG 57
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
CGYGSNCR++HPA+ + G Y EELP+R GQPDC Y+LKTG CKYGSTCKYHHPKDR G
Sbjct: 58 ACGYGSNCRYHHPAHISIGTHYGEELPQRAGQPDCEYFLKTGMCKYGSTCKYHHPKDRRG 117
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM 180
A PVSFN LG PMRQ+EKSCPYYMRTGSCKFGVACKFHHPQ +SLG A PL G +
Sbjct: 118 AAPVSFNTLGFPMRQEEKSCPYYMRTGSCKFGVACKFHHPQYASLG-AYPLAGGPPTPT- 175
Query: 181 GSSVLPSSGLQYA--------------------------------GIVPAPGWNTYMGNI 208
S+++P+SGL YA G++P WN YMGN+
Sbjct: 176 -STIIPTSGLSYAGGFPAWSAVPRMSYLSGQGLQSYVPPFLPSSQGVIPVQSWNNYMGNM 234
Query: 209 GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 268
P P GSNL+Y N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG
Sbjct: 235 NPAMPNGFLGSNLVYDYMNLGEPLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYG 289
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+DCKFHHPKERI+QS I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P
Sbjct: 290 SDCKFHHPKERISQSL---INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQ 346
Query: 329 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNS 388
NYGL+ P +++LD+ L + +S ETSP S N +Q+SDA +
Sbjct: 347 NYGLTSPAMNVLDTPLT--RGLSNVQPPETSPSKLSS-DNKLQHSDAKAA---------- 393
Query: 389 TTKNSDDSSKVDHPPHSVPNCSEPPHD 415
D S + D +S P +EP HD
Sbjct: 394 ---TEDSSKQDDTTSNSFPASAEPLHD 417
>gi|356501261|ref|XP_003519444.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 1 [Glycine max]
gi|356501263|ref|XP_003519445.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
isoform 2 [Glycine max]
Length = 415
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 238/448 (53%), Positives = 292/448 (65%), Gaps = 66/448 (14%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MP+NRQV NA S DNIEEAI LKI+DN + AQ++ YP RPGEP+CL+Y RTG
Sbjct: 1 MPENRQVLRNA---DSGDNIEEAIRHLKINDNWDRDAAAQSTQYPDRPGEPECLYYLRTG 57
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+CGYG+NCR++HPA+ + G Y EELP+R GQPDC Y+LKTGTCKYGSTCKYHHPKDR G
Sbjct: 58 MCGYGTNCRYHHPAHISIGTHYGEELPQRAGQPDCEYFLKTGTCKYGSTCKYHHPKDRRG 117
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM 180
A PVSFN LGLPMRQ+EKSCPYYMRTGSCKFGVACKFHHPQ +SLG A PL G+ +
Sbjct: 118 AAPVSFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQHASLG-AYPLAGSP---TP 173
Query: 181 GSSVLPSSGLQYA--------------------------------GIVPAPGWNTYMGNI 208
S+++P+SGL YA G++P WN YMGN+
Sbjct: 174 TSTIIPTSGLPYAGGFPAWSAVPRMSYLSGQGLQSYVPPFLSSSQGVIPVQSWNNYMGNM 233
Query: 209 GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 268
P P GSNL+Y N G+ G Q A + LP RPDQP+CRY+M+TGTCKYG
Sbjct: 234 NPAMPNGFLGSNLVYDYMNLGESLFGGQ-----AINSALPNRPDQPECRYFMSTGTCKYG 288
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+DCKFHHPKER++QS I PLGLP RPGQA+CS Y +YG+CKFGPTC+FDHP P
Sbjct: 289 SDCKFHHPKERMSQSL---INPLGLPVRPGQAVCSYYRIYGMCKFGPTCKFDHPVLTIPQ 345
Query: 329 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNS 388
NYGL+ P +++LD+ L + +S ETSP S +Q+SDA +
Sbjct: 346 NYGLTSPAMNVLDTPLT--RGLSNVQPPETSPSKLSD--KKLQHSDAKAA---------- 391
Query: 389 TTKNSDDSSKVDHPP-HSVPNCSEPPHD 415
++DSSK D +S P +EP H+
Sbjct: 392 ----TEDSSKQDDTTLNSFPASAEPLHN 415
>gi|357493165|ref|XP_003616871.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355518206|gb|AES99829.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 422
Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust.
Identities = 229/404 (56%), Positives = 275/404 (68%), Gaps = 38/404 (9%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
MP+NRQV NA +N S DNIEEAI RLKI+ ++ V Q+ PYP RPGEPDC++Y RTG
Sbjct: 1 MPENRQVFKNAGSNPSGDNIEEAIRRLKINSTRDRDAVPQSMPYPDRPGEPDCVYYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+CGYGSNCR+NHPA + QY EELPER GQPDC Y+LKTGTCKYGSTCKYHHPKDR G
Sbjct: 61 MCGYGSNCRYNHPANISPVTQYGEELPERVGQPDCEYFLKTGTCKYGSTCKYHHPKDRRG 120
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP-QPSSLGTALPLTGNASLGS 179
A PV FN LGLPMRQ+EKSCPYYMRTGSCKFGVACKFHHP Q +S G A P+ + +
Sbjct: 121 AAPVVFNTLGLPMRQEEKSCPYYMRTGSCKFGVACKFHHPQQAASFGGAYPVAASPPSTT 180
Query: 180 MGSSVLPSSG---------LQYA-----------------GIVPAPGWNTYMGNIGPLSP 213
+ SS P +G + Y GI+PA W+ YMG+I P P
Sbjct: 181 VTSSGFPYAGGFPAWSMPRMSYLSGQAIQSYVPPFLPSSQGIMPALSWSNYMGSINPAMP 240
Query: 214 TSIAGSNLIYSSRN-QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 272
T GSNL+Y N G+ +G Q A + +LP+RP+QPDC+Y+M+TGTCKYG+DCK
Sbjct: 241 TGFIGSNLVYDYMNPAGETLSGGQ-----AMNSSLPDRPEQPDCKYFMSTGTCKYGSDCK 295
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 332
FHHPKERIAQ+ + I PLGLP RPG AICS Y +YG+CKFGPTC+FDHP NYGL
Sbjct: 296 FHHPKERIAQTLS--INPLGLPMRPGNAICSYYRIYGVCKFGPTCKFDHPVVAISQNYGL 353
Query: 333 SLPPLSILDSSLM-NHQAISATHSIETSPDASSKIPNWVQNSDA 375
P LS+ D+SL+ N + +S ETSP S + +Q SD
Sbjct: 354 PSPTLSVFDASLLTNPRRLSTVQPAETSPSKQST--DKLQQSDT 395
>gi|18390466|ref|NP_563725.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|42571337|ref|NP_973759.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|62901489|sp|Q94AD9.1|C3H3_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 3;
Short=AtC3H3; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 4
gi|15081721|gb|AAK82515.1| At1g04990/F13M7_1 [Arabidopsis thaliana]
gi|21360515|gb|AAM47373.1| At1g04990/F13M7_1 [Arabidopsis thaliana]
gi|225897880|dbj|BAH30272.1| hypothetical protein [Arabidopsis thaliana]
gi|332189654|gb|AEE27775.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
gi|332189655|gb|AEE27776.1| zinc finger CCCH domain-containing protein 3 [Arabidopsis thaliana]
Length = 404
Score = 355 bits (910), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 198/424 (46%), Positives = 255/424 (60%), Gaps = 60/424 (14%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K+++ GV + +PYP RPGE DC FY RTG
Sbjct: 5 MSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
LCGYGS+CR+NHP + Q A Y+EELPER GQPDC Y+LKTG CKYG TCKYHHPKDRN
Sbjct: 61 LCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRN 120
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP---------------SS 164
GA PV FN++GLPMR EK CPYY+RTG+C+FGVACKFHHPQP +
Sbjct: 121 GAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAAD 180
Query: 165 LGTALPLTGNASLGSMGSSVLPSSGLQYA-----GIVPAPGWNTYMGNIGPLSPTSIAGS 219
L A LT ++ G++ +P S + G +P GW YM A S
Sbjct: 181 LRYASGLTMMSTYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYM-----------AAS 229
Query: 220 NLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
N +Y+ +NQ G+ A M + A ++ L E DQP+CR++MNTGTCKYG DCK+ HP
Sbjct: 230 NSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGV 289
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSLPPL 337
RI+Q S I P LP+RPGQ C N+ YG CKFGP C+FDHP YP + SLP
Sbjct: 290 RISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP-- 347
Query: 338 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 397
+ S + HQ IS T PN SD+ S+ + PD+K K S ++
Sbjct: 348 TPFASPVTTHQRISPT-------------PN---RSDSKSLSNGKPDVK----KESSETE 387
Query: 398 KVDH 401
K D+
Sbjct: 388 KPDN 391
>gi|297848754|ref|XP_002892258.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297338100|gb|EFH68517.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 411
Score = 349 bits (896), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 198/433 (45%), Positives = 254/433 (58%), Gaps = 80/433 (18%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K++DN G +++PYP RPGE DC FY RTG
Sbjct: 5 MSDTQHVQSSMVSIRSSDKIEDAFRKMKVNDN----GGEESNPYPDRPGERDCQFYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQGAQY-REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
LCGYGS+CR+NHPA+ Q Y +EELPER GQPDC Y+LKTG CKYGSTCKYHHPKDRN
Sbjct: 61 LCGYGSSCRYNHPAHLPQDVAYHKEELPERIGQPDCEYFLKTGACKYGSTCKYHHPKDRN 120
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS 179
GA PV FN++GLPMRQ EK CPYY+RTG+C+FGVACKFHHPQP N +
Sbjct: 121 GAQPVMFNVIGLPMRQGEKPCPYYLRTGTCRFGVACKFHHPQPD----------NGHSTA 170
Query: 180 MGSSVLPSSGLQYA------------------------------GIVPAPGWNTYMGNIG 209
G S PS+GLQYA G++P GW YM
Sbjct: 171 YGMSSFPSAGLQYASGLTMMSTYGTLPRPQVPQSYVPIMVSPSQGLLPPQGWAPYM---- 226
Query: 210 PLSPTSIAGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYG 268
SN +Y+ +NQ G+ A M + A ++ L E +QP+CR++MNTGTCKYG
Sbjct: 227 -------PASNSMYNVKNQPYYSGSSAPMAMAVALNRGLSESSEQPECRFFMNTGTCKYG 279
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP- 327
DCK++HP RI+Q + I P LP+RPGQ C N+ YG CKFG C+FDHP Y
Sbjct: 280 DDCKYNHPGVRISQPPPNLINPFVLPARPGQPACGNFRSYGFCKFGRNCKFDHPMLPYQG 339
Query: 328 INYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKN 387
+ SLP + S + HQ IS + PN SD+ S+ + PD+K
Sbjct: 340 LTMASSLP--TPYASPVSTHQRISPS-------------PN---RSDSKSLSNGKPDVK- 380
Query: 388 STTKNSDDSSKVD 400
K S ++ K D
Sbjct: 381 ---KESSETEKAD 390
>gi|359488091|ref|XP_003633700.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 3-like [Vitis vinifera]
Length = 324
Score = 347 bits (891), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 169/293 (57%), Positives = 209/293 (71%), Gaps = 35/293 (11%)
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
+R GQPDCGYYLKT TCKYGS CKYHH +DR AGPVS NI+GL MRQ+EK C YYMRTG
Sbjct: 26 KRIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVSLNIVGLSMRQEEKPCSYYMRTG 85
Query: 148 SCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG------------- 194
CKFGVACKFHH QP+S+GT LP+TG+ + GS G S+ PSSGL Y G
Sbjct: 86 LCKFGVACKFHHLQPASIGTVLPVTGSVAFGSTGISITPSSGLSYVGGIPAWLLPRAPYM 145
Query: 195 ---------------------IVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 233
I+PA GWNTYMGN+ P+S TSI GSNL+Y+++N + +
Sbjct: 146 PGPRMQGPQTYMPIVLSPSQGIIPAQGWNTYMGNMSPISSTSILGSNLVYNTKNPSESSS 205
Query: 234 GAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL 293
Q+H+LS S +LPER DQP+C Y+M+TG+CKY +DCK+HHPKERIA A + +GPL L
Sbjct: 206 NGQVHLLSLSIPHLPERRDQPECXYFMSTGSCKYDSDCKYHHPKERIAXLATNTLGPLDL 265
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY-PINYGLSLPPLSILDSSLM 345
PSRPGQA+C +Y++YG+ ++GPTC+FDHP GY NY LSLPPLSIL+ SL+
Sbjct: 266 PSRPGQAVCFHYNLYGLYRYGPTCKFDHPLTGYSSYNYCLSLPPLSILEPSLL 318
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 48/79 (60%), Gaps = 5/79 (6%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG---LPMRQDEKSCP 141
LPER QP+C Y++ TG+CKY S CKYHHPK+R ++ N LG LP R + C
Sbjct: 218 HLPERRDQPECXYFMSTGSCKYDSDCKYHHPKER--IAXLATNTLGPLDLPSRPGQAVCF 275
Query: 142 YYMRTGSCKFGVACKFHHP 160
+Y G ++G CKF HP
Sbjct: 276 HYNLYGLYRYGPTCKFDHP 294
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 4/75 (5%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYLK 100
P R +P+C ++ TG C Y S+C+++HP A A +LP R GQ C +Y
Sbjct: 220 PERRDQPECXYFMSTGSCKYDSDCKYHHPKERIAXLATNTLGPLDLPSRPGQAVCFHYNL 279
Query: 101 TGTCKYGSTCKYHHP 115
G +YG TCK+ HP
Sbjct: 280 YGLYRYGPTCKFDHP 294
>gi|7211990|gb|AAF40461.1|AC004809_19 Contains similarity to zinc finger protein from Arabidopsis
thaliana gb|AC018363. EST gb|AA713271 comes from this
gene [Arabidopsis thaliana]
Length = 396
Score = 342 bits (878), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 195/424 (45%), Positives = 252/424 (59%), Gaps = 64/424 (15%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K+++ GV + +PYP RPGE DC FY RTG
Sbjct: 1 MSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFYLRTG 56
Query: 61 LCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
LCGYGS+CR+NHP + Q A Y+EELPER GQPDC +TG CKYG TCKYHHPKDRN
Sbjct: 57 LCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDC----ETGACKYGPTCKYHHPKDRN 112
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP---------------SS 164
GA PV FN++GLPMR EK CPYY+RTG+C+FGVACKFHHPQP +
Sbjct: 113 GAQPVMFNVIGLPMRLGEKPCPYYLRTGTCRFGVACKFHHPQPDNGHSTAYGMSSFPAAD 172
Query: 165 LGTALPLTGNASLGSMGSSVLPSSGLQYA-----GIVPAPGWNTYMGNIGPLSPTSIAGS 219
L A LT ++ G++ +P S + G +P GW YM A S
Sbjct: 173 LRYASGLTMMSTYGTLPRPQVPQSYVPILVSPSQGFLPPQGWAPYM-----------AAS 221
Query: 220 NLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
N +Y+ +NQ G+ A M + A ++ L E DQP+CR++MNTGTCKYG DCK+ HP
Sbjct: 222 NSMYNVKNQPYYSGSSASMAMAVALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHPGV 281
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP-INYGLSLPPL 337
RI+Q S I P LP+RPGQ C N+ YG CKFGP C+FDHP YP + SLP
Sbjct: 282 RISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP-- 339
Query: 338 SILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSS 397
+ S + HQ IS T PN SD+ S+ + PD+K K S ++
Sbjct: 340 TPFASPVTTHQRISPT-------------PN---RSDSKSLSNGKPDVK----KESSETE 379
Query: 398 KVDH 401
K D+
Sbjct: 380 KPDN 383
>gi|297826741|ref|XP_002881253.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
gi|297327092|gb|EFH57512.1| hypothetical protein ARALYDRAFT_345050 [Arabidopsis lyrata subsp.
lyrata]
Length = 460
Score = 314 bits (805), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 196/465 (42%), Positives = 267/465 (57%), Gaps = 88/465 (18%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
+QV+++ + +S + I++ R+K++++ + Q+SPYP RPGE DC F+ RTG CGY
Sbjct: 6 QQVQNSTGSIRSPEKIQDTFRRMKVNED----NMEQSSPYPDRPGERDCQFFLRTGQCGY 61
Query: 65 GSNCRFNHP-AYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
G+ CR+NHP + QG Y+++LPER GQPDC Y+LKTG CKYG TCKYHHPKDRNGAG
Sbjct: 62 GNTCRYNHPLTHLPQGVIYYKDQLPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAG 121
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFH--HPQPSSLGTALPLTGN------ 174
PV FN+LG PMRQ EKSCPYYM+TG C+FGVACKFH HPQPS+ +A L+
Sbjct: 122 PVLFNVLGFPMRQGEKSCPYYMQTGLCRFGVACKFHHPHPQPSNGHSAYALSSFPSVGFP 181
Query: 175 ------------ASLGSMGSSVLPSSGLQY-------AGIVPAPGWNTYMGNIGPLSPTS 215
A+ G+M +P S G++P GW TYM
Sbjct: 182 YASGMTMVSLPPATYGAMARPQVPQSQAYMPFMVAPSQGLLPPQGWATYM---------- 231
Query: 216 IAGSNLIYSSRNQGDLGAGAQMHI-LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
A SN IYS + Q D + A + + +++ + ER +CR++MNTGTCKYG DCK+
Sbjct: 232 -AASNPIYSVKAQPDSSSSASVPVAMTSHYHSFSER---AECRFFMNTGTCKYGDDCKYS 287
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN-YGLS 333
HPKER+ QS + + P+ LP+RPGQ C N+ YG CKFG +C+FDH P N GL+
Sbjct: 288 HPKERLLQSPPNLLNPIVLPARPGQPACGNFKAYGFCKFGASCKFDHSMPLNPYNTTGLA 347
Query: 334 L----------PPLSI-----------LDSSLMNHQAISA-THSIETSP-DASSKIP--N 368
+ PP+S S+L N + +A T S+ET D S P +
Sbjct: 348 MSSLPTPNPYAPPVSTNLRISSPPSPPDSSTLSNGKPGAAETQSLETEKQDDSPAQPEKS 407
Query: 369 WVQN------SDAVSVQHQNPDMKNSTTKNS--------DDSSKV 399
VQ+ SD+ S+ + PD +N +++N DSSKV
Sbjct: 408 EVQDSLPPSCSDSTSLPNVKPDSENPSSENEKQDDNTIQQDSSKV 452
>gi|148907689|gb|ABR16973.1| unknown [Picea sitchensis]
Length = 504
Score = 305 bits (782), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 213/387 (55%), Gaps = 67/387 (17%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKI--HDNQEGGGVAQASPYPARPGEPDCLFYRR 58
M +N ++ + D +EEA+ ++ I HD E G + + PYP RPGE DC +Y R
Sbjct: 45 MHENWHLRPRPSPSLPGDALEEAMLQMTIQSHDPLEEIGTS-SGPYPERPGEQDCAYYMR 103
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
TGLCGYG NC FNHP + AQY ELPER GQP+C +++KTG CKYG+TCKYHHP+DR
Sbjct: 104 TGLCGYGMNCHFNHPPNVKRAAQYMNELPERFGQPECKHFMKTGVCKYGATCKYHHPRDR 163
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
+G+ V N LGLPMRQ EK CPYYMRTGSCK+GV CKFHH P++L LP +G+
Sbjct: 164 DGSK-VQLNYLGLPMRQGEKECPYYMRTGSCKYGVTCKFHHSDPTAL---LPDSGSPVYA 219
Query: 179 SMGSSVLPSSGLQY-AGIVP----------------------------------APGWNT 203
+ S+ P+SG Y AG+ PGW+T
Sbjct: 220 AAELSLSPASGSTYPAGLASWSLQRAPYVSGPCLQGSPTYMPVILSPQQSTPSVQPGWST 279
Query: 204 YMGNIGPLSP---TSIAGSNLIYSSRN------------------QGDLGA----GAQMH 238
Y G I PLS G+ +YSS QG A G Q
Sbjct: 280 YHGPISPLSSPEGKRQLGTGTVYSSSYMTGSSSSRHMRGALSPPVQGSSTAMEHPGVQSQ 339
Query: 239 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
+ + + PERPDQP C++YM TG CKYG C++HHPKER+A S GLP RPG
Sbjct: 340 VAAPQREAFPERPDQPQCQHYMKTGCCKYGTTCRYHHPKERVALSPWCMFSSQGLPLRPG 399
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAG 325
Q C YS YGICKFGP C+FDH G
Sbjct: 400 QPTCPFYSRYGICKFGPICKFDHSLTG 426
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 16/98 (16%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----------YAAQGAQYREELPER 89
Q +P RP +P C Y +TG C YG+ CR++HP +++QG LP R
Sbjct: 344 QREAFPERPDQPQCQHYMKTGCCKYGTTCRYHHPKERVALSPWCMFSSQG------LPLR 397
Query: 90 NGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN 127
GQP C +Y + G CK+G CK+ H P +F+
Sbjct: 398 PGQPTCPFYSRYGICKFGPICKFDHSLTGPNCNPAAFS 435
>gi|357507737|ref|XP_003624157.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355499172|gb|AES80375.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 418
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 162/365 (44%), Positives = 219/365 (60%), Gaps = 55/365 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMSLRPSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+ NILG P+R +
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM---------------- 180
E C YY+RTG CKFG CKFHHPQPS++ LP+ G+ ++
Sbjct: 124 ESECAYYLRTGQCKFGNTCKFHHPQPSNM--VLPMRGSPVYPTVQSPTTAGQQSYAAGIT 181
Query: 181 ---GSSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
SS +PS Q YA G+V PGW+TY G +G SP ++ Y + +
Sbjct: 182 NWSTSSYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSH 241
Query: 228 QGD-LGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKF 273
QGD AG Q + + +N+ PERPDQP+C++YM TG CK+GA C+F
Sbjct: 242 QGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRF 301
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
HHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP + Y +S
Sbjct: 302 HHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIF--TYNVS 359
Query: 334 LPPLS 338
PL+
Sbjct: 360 ASPLA 364
>gi|186477892|gb|ACC85690.1| zinc finger protein [Medicago sativa]
gi|400530100|gb|AFP86282.1| zinc finger protein [Medicago sativa]
Length = 418
Score = 300 bits (769), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 159/365 (43%), Positives = 216/365 (59%), Gaps = 55/365 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMSLRPSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+ NILG P+R +
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM---------------- 180
E C YY+RTG CKFG CKFHHPQPS++ LP+ G+ ++
Sbjct: 124 ESECAYYLRTGQCKFGNTCKFHHPQPSNM--VLPMRGSPVYPTVQSPTTAGQQSYAAGIT 181
Query: 181 ---GSSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
SS +PS Q YA G+V PGW+TY G +G SP ++ Y + +
Sbjct: 182 NWSTSSYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTMRNDQTYGTSH 241
Query: 228 QGD-------------LGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKF 273
QGD + + +N+ PERPDQP+C++YM TG CK+GA C+F
Sbjct: 242 QGDPENAGLPGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRF 301
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
HHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP + Y +S
Sbjct: 302 HHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIF--TYNVS 359
Query: 334 LPPLS 338
PL+
Sbjct: 360 ASPLA 364
>gi|18403134|ref|NP_565758.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
gi|62901127|sp|O48772.1|C3H26_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 26;
Short=AtC3H26; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN2
gi|4928919|gb|AAD33770.1|AF138744_1 zinc finger protein 2 [Arabidopsis thaliana]
gi|2702272|gb|AAB91975.1| expressed protein [Arabidopsis thaliana]
gi|330253669|gb|AEC08763.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
Length = 453
Score = 298 bits (763), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 251/466 (53%), Gaps = 100/466 (21%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
+QV+++ + +S D IE+ R+K++++ + Q+SPYP RPGE DC F+ RTG CGY
Sbjct: 6 QQVQNSTGSIRSPDKIEDTFRRMKVNED----NMEQSSPYPDRPGERDCQFFLRTGQCGY 61
Query: 65 GSNCRFNHP-AYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
G++CR+NHP QG YR++LPER GQPDC +TG CKYG TCKYHHPKDRNGAG
Sbjct: 62 GNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDC----ETGACKYGPTCKYHHPKDRNGAG 117
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS 182
PV FN+LGLPMRQ EK CPYYM+TG C+FGVACKFHHP P S P G+++
Sbjct: 118 PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHS----QPSNGHSAY---AM 170
Query: 183 SVLPSSGLQYA------------------------------------GIVPAPGWNTYMG 206
S PS G YA G++P GW TYM
Sbjct: 171 SSFPSVGFPYASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYM- 229
Query: 207 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
SN IY+ + Q D + A + + S + ++ +CR++MNTGTCK
Sbjct: 230 ----------TASNPIYNMKTQLDSSSSASVAVTVTSHHH--SFSERAECRFFMNTGTCK 277
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH----- 321
YG DCK+ HPKER+ QS + + P+ LP+RPGQ C N+ YG CKFG C+FDH
Sbjct: 278 YGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLN 337
Query: 322 --------------PYAGYP---INYGLSLPPLSILDSSLMNHQ-AISATHSIE------ 357
PY P N +S PP ++L N + A + S+E
Sbjct: 338 PYNNTGLAMSSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDD 397
Query: 358 --TSPDASSKIPNWVQN-SDAVSVQHQNPDMKNSTTKNSDDSSKVD 400
T P+ S + N SD+ S+ + PD + T K DDS+++D
Sbjct: 398 SPTEPEKSEVEDSLPPNGSDSTSLPNDKPDAE--TEKQDDDSAELD 441
>gi|334184645|ref|NP_001189661.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
gi|330253670|gb|AEC08764.1| zinc finger CCCH domain-containing protein 26 [Arabidopsis
thaliana]
Length = 467
Score = 298 bits (762), Expect = 4e-78, Method: Compositional matrix adjust.
Identities = 188/466 (40%), Positives = 251/466 (53%), Gaps = 100/466 (21%)
Query: 5 RQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
+QV+++ + +S D IE+ R+K++++ + Q+SPYP RPGE DC F+ RTG CGY
Sbjct: 6 QQVQNSTGSIRSPDKIEDTFRRMKVNED----NMEQSSPYPDRPGERDCQFFLRTGQCGY 61
Query: 65 GSNCRFNHPAY-AAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
G++CR+NHP QG YR++LPER GQPDC +TG CKYG TCKYHHPKDRNGAG
Sbjct: 62 GNSCRYNHPLTNLPQGIIYYRDQLPERVGQPDC----ETGACKYGPTCKYHHPKDRNGAG 117
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS 182
PV FN+LGLPMRQ EK CPYYM+TG C+FGVACKFHHP P S P G+++
Sbjct: 118 PVLFNVLGLPMRQGEKPCPYYMQTGLCRFGVACKFHHPHPHS----QPSNGHSAY---AM 170
Query: 183 SVLPSSGLQYA------------------------------------GIVPAPGWNTYMG 206
S PS G YA G++P GW TYM
Sbjct: 171 SSFPSVGFPYASGMTMVSLPPATYGAIPRPQVPQSQAYMPYMVAPSQGLLPPQGWATYM- 229
Query: 207 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
SN IY+ + Q D + A + + S + ++ +CR++MNTGTCK
Sbjct: 230 ----------TASNPIYNMKTQLDSSSSASVAVTVTSHHH--SFSERAECRFFMNTGTCK 277
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH----- 321
YG DCK+ HPKER+ QS + + P+ LP+RPGQ C N+ YG CKFG C+FDH
Sbjct: 278 YGDDCKYSHPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLN 337
Query: 322 --------------PYAGYP---INYGLSLPPLSILDSSLMNHQ-AISATHSIE------ 357
PY P N +S PP ++L N + A + S+E
Sbjct: 338 PYNNTGLAMSSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDD 397
Query: 358 --TSPDASSKIPNWVQN-SDAVSVQHQNPDMKNSTTKNSDDSSKVD 400
T P+ S + N SD+ S+ + PD + T K DDS+++D
Sbjct: 398 SPTEPEKSEVEDSLPPNGSDSTSLPNDKPDAE--TEKQDDDSAELD 441
>gi|359476779|ref|XP_002278934.2| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Vitis vinifera]
Length = 441
Score = 297 bits (761), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 161/362 (44%), Positives = 213/362 (58%), Gaps = 53/362 (14%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ ++ PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 26 QDAMWQMNLRSSE----TMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAI 81
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG VS NILG P+R D
Sbjct: 82 ATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPD 141
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL-----------PLT--------GNASL 177
E C YY+RTG CKFG CKFHHPQPSS+ +L P T G +
Sbjct: 142 EIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSLRGSPVYPSVPSPTTPGQQSYAGGITNW 201
Query: 178 GSMGSSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTS--IAGSNLIY-S 224
+S +PS Q YA G+V PGWN Y G +G S + G+N IY +
Sbjct: 202 PLSRASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYSGQLGSPSESQQQTGGNNQIYGT 261
Query: 225 SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADC 271
SR G+Q + + +N+ PERP QP+C++YM TG CK+GA C
Sbjct: 262 SRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPERPGQPECQFYMKTGDCKFGAVC 321
Query: 272 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 331
+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 322 RFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFAYNLS 381
Query: 332 LS 333
S
Sbjct: 382 AS 383
>gi|356531906|ref|XP_003534517.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 297 bits (760), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 158/367 (43%), Positives = 215/367 (58%), Gaps = 49/367 (13%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
V S D + +A+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFN
Sbjct: 9 VWTCSYDVVSDAMWQINLRSSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFN 64
Query: 72 HP---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HP A A+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ N
Sbjct: 65 HPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMN 124
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL-----------PLTGNAS 176
ILG P+R +E C YY+RTG CKFG CKFHHPQP+++ ++ P T
Sbjct: 125 ILGYPLRPNEPECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGQQ 184
Query: 177 LGSMG------SSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSN 220
+ G SS +PS Q YA G+V PGW+ Y G +G SP G+
Sbjct: 185 SYATGITNWSSSSYIPSPRWQGPSSYAPLILPQGMVSVPGWSAYSGQMGSDSPQQTMGNG 244
Query: 221 LIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGTCK 266
Y + Q G GA +Q + +N+ PERPDQP+C++YM TG CK
Sbjct: 245 QSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCK 304
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP +
Sbjct: 305 FGAVCRFHHPRERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVF 364
Query: 327 PINYGLS 333
N S
Sbjct: 365 TYNISAS 371
>gi|255543128|ref|XP_002512627.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223548588|gb|EEF50079.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 448
Score = 295 bits (755), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 170/414 (41%), Positives = 228/414 (55%), Gaps = 65/414 (15%)
Query: 16 SADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-- 73
SA E+A+W++ + ++ + PYP PGEPDC +Y RTGLC +G+ CRFNHP
Sbjct: 30 SASLNEDAMWQMNLRSSE----TMDSGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPN 85
Query: 74 -AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGL 131
A A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHPKD+ G AG VS NILG
Sbjct: 86 RKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDKAGIAGRVSLNILGY 145
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSG-- 189
P+R +E C YY+RTG CKFG CKFHHPQP+++ +PL G+ ++ S P
Sbjct: 146 PLRPNEIECAYYLRTGQCKFGSTCKFHHPQPTNV--MVPLRGSPVYPTVQSPTTPGQQSY 203
Query: 190 ---------------------------LQYAGIVPAPGWNTYMGNIGPLSP---TSIAGS 219
+ G+V PGWN Y G +G +S G+
Sbjct: 204 TGGVTNWSRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPEGQQQTGN 263
Query: 220 NLIY-SSRNQGDLGAGAQ--MHILSASSQ-----------NLPERPDQPDCRYYMNTGTC 265
+ IY +SR + G+Q + L A S PERP QP+C++YM TG C
Sbjct: 264 SQIYGTSRQSESVNTGSQGTLSPLRAGSMPVGFYALQRDNVFPERPGQPECQFYMKTGDC 323
Query: 266 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
K+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YG+CKFGP+C+FDHP
Sbjct: 324 KFGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGVCKFGPSCKFDHPMGI 383
Query: 326 YPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD 374
+ Y LS P P+ L S A+ T S E DA S P + S+
Sbjct: 384 F--TYNLSAPSSADAPVRRLLGSSSGSAAL--TLSTEGLVDAGSTKPRRLSLSE 433
>gi|62901479|sp|Q9SWF9.1|ZFNL_PEA RecName: Full=Zinc finger CCCH domain-containing protein ZFN-like
gi|5616313|gb|AAD45720.1| zinc finger protein [Pisum sativum]
Length = 417
Score = 294 bits (753), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 157/354 (44%), Positives = 212/354 (59%), Gaps = 49/354 (13%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMNLRSSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+ NILG P+R +
Sbjct: 64 ATARMKGEFPERLGQPECQYYLKTGTCKFGATCRFHHPKDKAGVAGRVALNILGYPLRPN 123
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL-----------PLTGNASLGSMG---- 181
E YY+RTG CKFG CKFHHPQPS++ ++ P T + G
Sbjct: 124 ESERAYYLRTGQCKFGNTCKFHHPQPSNMVLSMRGSTVYPTVQSPTTPGQQSYAAGITNW 183
Query: 182 --SSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQG 229
SS +PS Q YA G+V PGW+TY G +G SP ++ Y + +QG
Sbjct: 184 SSSSYVPSPRWQGPSSYAPLILPQGVVSVPGWSTYGGQMGSESPQQTMRNDQTYGTSHQG 243
Query: 230 DL-GAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHH 275
+L AG Q + + N+ PERPDQP+C++YM TG CK+GA C+FHH
Sbjct: 244 ELENAGLQGAYSQYRSGSVPVGFYALQRDNIFPERPDQPECQFYMKTGDCKFGAVCRFHH 303
Query: 276 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 329
P+ER + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 304 PRERQIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGIFTYN 357
>gi|124359159|gb|ABD28369.2| Zinc finger, CCCH-type; Sugar transporter superfamily [Medicago
truncatula]
Length = 428
Score = 294 bits (753), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 162/375 (43%), Positives = 219/375 (58%), Gaps = 65/375 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+EA+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 8 QEAMWQMSLRPSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAI 63
Query: 78 QGAQYREELPERNGQPDCG----------YYLKTGTCKYGSTCKYHHPKDRNG-AGPVSF 126
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHPKD+ G AG V+
Sbjct: 64 ATARMKGEFPERLGQPECQASVNECCIMHYYLKTGTCKFGATCRFHHPKDKAGVAGRVAL 123
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM------ 180
NILG P+R +E C YY+RTG CKFG CKFHHPQPS++ LP+ G+ ++
Sbjct: 124 NILGYPLRPNESECAYYLRTGQCKFGNTCKFHHPQPSNM--VLPMRGSPVYPTVQSPTTA 181
Query: 181 -------------GSSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIA 217
SS +PS Q YA G+V PGW+TY G +G SP
Sbjct: 182 GQQSYAAGITNWSTSSYIPSPRWQGPSSYAPLILPQGVVSVPGWSTYNGQMGSDSPQQTM 241
Query: 218 GSNLIYSSRNQGD-LGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTG 263
++ Y + +QGD AG Q + + +N+ PERPDQP+C++YM TG
Sbjct: 242 RNDQTYGTSHQGDPENAGLQGVYSQYRSGSVPVGFYALQRENIFPERPDQPECQFYMKTG 301
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
CK+GA C+FHHP+ER + + PLGLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 302 DCKFGAVCRFHHPRERTIPAPDCVLSPLGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPM 361
Query: 324 AGYPINYGLSLPPLS 338
+ Y +S PL+
Sbjct: 362 GIF--TYNVSASPLA 374
>gi|222615948|gb|EEE52080.1| hypothetical protein OsJ_33853 [Oryza sativa Japonica Group]
Length = 529
Score = 293 bits (751), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 227/410 (55%), Gaps = 65/410 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EEA+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 121 EEAMWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAV 174
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +
Sbjct: 175 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPN 234
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL--------------------------P 170
EK C YY+RTG CKFG CKFHHPQPS+ A+ P
Sbjct: 235 EKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWP 294
Query: 171 LTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP----TSIAGSNL 221
L+ +AS + S P SS Q G+V PGWN Y IG S + G+
Sbjct: 295 LSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQY 352
Query: 222 IYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKYG 268
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+G
Sbjct: 353 YTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFG 412
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
A CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP +
Sbjct: 413 AVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMG--TV 470
Query: 329 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 471 MYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 517
>gi|122207693|sp|Q2R4J4.2|C3H63_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 63;
Short=OsC3H63
gi|108864370|gb|ABA93650.2| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
Length = 444
Score = 293 bits (751), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 176/410 (42%), Positives = 227/410 (55%), Gaps = 65/410 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EEA+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 36 EEAMWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAV 89
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +
Sbjct: 90 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPN 149
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL--------------------------P 170
EK C YY+RTG CKFG CKFHHPQPS+ A+ P
Sbjct: 150 EKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWP 209
Query: 171 LTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP----TSIAGSNL 221
L+ +AS + S P SS Q G+V PGWN Y IG S + G+
Sbjct: 210 LSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQY 267
Query: 222 IYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKYG 268
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+G
Sbjct: 268 YTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFG 327
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
A CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP +
Sbjct: 328 AVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGT--V 385
Query: 329 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 386 MYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 432
>gi|356531908|ref|XP_003534518.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 426
Score = 293 bits (750), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 211/357 (59%), Gaps = 49/357 (13%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQ 78
+A+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A
Sbjct: 17 DAMWQINLRSSE----TMESGPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIA 72
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ NILG P+R +E
Sbjct: 73 AARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVAMNILGYPLRPNE 132
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL-----------PLTGNASLGSMG----- 181
C YY+RTG CKFG CKFHHPQP+++ ++ P T + G
Sbjct: 133 PECAYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGQQSYATGITNWS 192
Query: 182 -SSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQ-- 228
SS +PS Q YA G+V PGW+ Y G +G SP G+ Y + Q
Sbjct: 193 SSSYIPSPRWQGPSSYAPLILPQGMVSVPGWSAYSGQMGSDSPQQTMGNGQSYGTSRQSE 252
Query: 229 ----GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHP 276
G GA +Q + +N+ PERPDQP+C++YM TG CK+GA C+FHHP
Sbjct: 253 PANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCKFGAVCRFHHP 312
Query: 277 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N S
Sbjct: 313 RERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVFTYNISAS 369
>gi|224128808|ref|XP_002328972.1| predicted protein [Populus trichocarpa]
gi|222839206|gb|EEE77557.1| predicted protein [Populus trichocarpa]
Length = 425
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 153/363 (42%), Positives = 208/363 (57%), Gaps = 59/363 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
+ +A+W++ + ++ +A PYP RPGEPDC +Y RTGLC +G+ CRFNHP
Sbjct: 9 SFSDAMWQMNLRSSE----TMEAGPYPERPGEPDCSYYIRTGLCRFGATCRFNHPPNRKL 64
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
A A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G +G VS NILG P++
Sbjct: 65 AIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGISGRVSLNILGYPLQ 124
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSS-----G 189
+E C YY+RTG CKFG CKFHHPQP+++ +PL G+ ++ S P G
Sbjct: 125 PNEIECAYYLRTGQCKFGSTCKFHHPQPTNM--MVPLRGSPIYPTVSSPTTPGQQSYPGG 182
Query: 190 LQYA-------------------------GIVPAPGWNTYMGNIG----PLSPTSIAGSN 220
L G+V PGWN Y G +G P S S
Sbjct: 183 LATTWSRASFITSPRWQAPSSYTPLILPQGVVSVPGWNAYSGQLGSVSSPESQQQTGNSQ 242
Query: 221 LIYSSRNQGDLGAGAQ--------------MHILSASSQNLPERPDQPDCRYYMNTGTCK 266
+ +SR+ + AG+Q + L S PERP QP+C++YM TG CK
Sbjct: 243 IYGTSRHSESVNAGSQGTFSPYRSGSAPLGFYALQRESV-FPERPGQPECQFYMKTGDCK 301
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP +
Sbjct: 302 FGAVCRFHHPRERLIPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGVF 361
Query: 327 PIN 329
N
Sbjct: 362 TYN 364
>gi|148907602|gb|ABR16930.1| unknown [Picea sitchensis]
Length = 554
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 150/371 (40%), Positives = 210/371 (56%), Gaps = 61/371 (16%)
Query: 16 SADNIEEAIWRLKIHDNQEGGGV-AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+A++++E++ R+ + + + YP R G+ DC Y RTG CGYG NCRFNHP
Sbjct: 45 AAESMKESMRRMTLQPQDSRSRMNGYSESYPERFGQADCSHYMRTGYCGYGMNCRFNHPT 104
Query: 75 -YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
Q A+ + ELPER G C +Y+KTGTCK+G+TCKYHHP+DR GAG V N++GLPM
Sbjct: 105 NMKLQAARNKGELPERVGHNACQFYMKTGTCKFGATCKYHHPRDRLGAGQVQLNMIGLPM 164
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 193
R EK C YY+RTG CK+G +CK+ HPQP++LGT +P++G+ ++ + P+S QY+
Sbjct: 165 RMGEKECTYYIRTGYCKYGASCKYDHPQPAALGTLVPVSGSPLYATIRPPIAPASATQYS 224
Query: 194 ----------------------------------GIVPAPGWNTYMGNIGPL-SPTS--- 215
G++ A GW TY PL SP S
Sbjct: 225 PGLPTWPSPRTPYRQSPHMPGALPYMPVMYSPHQGMLAASGWGTYQSPASPLTSPESQQQ 284
Query: 216 IAGSNLIYSSRNQGDLGAGAQMHILS---------------------ASSQNLPERPDQP 254
+ N++Y+S L G +++ ++ PERP QP
Sbjct: 285 LRRMNIMYNSTQPNGLSVGGVQGLITPFAQGSSAAVGHQPGHFQPNRTQTETYPERPGQP 344
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 314
+C+YY+ TG CK+G C++HHP ER++QS+ + P+GLP RP Q C+ YS YGICKFG
Sbjct: 345 ECQYYIKTGDCKFGFACRYHHPHERVSQSSTCVLSPIGLPLRPTQPTCTYYSHYGICKFG 404
Query: 315 PTCRFDHPYAG 325
PTC+FDHP AG
Sbjct: 405 PTCKFDHPMAG 415
>gi|242070873|ref|XP_002450713.1| hypothetical protein SORBIDRAFT_05g013190 [Sorghum bicolor]
gi|241936556|gb|EES09701.1| hypothetical protein SORBIDRAFT_05g013190 [Sorghum bicolor]
Length = 446
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 174/429 (40%), Positives = 235/429 (54%), Gaps = 65/429 (15%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-- 74
D + EA+W++ + + + PYP R GEPDC +Y RTG+C +G C+FNHPA
Sbjct: 30 VDQVAEAMWQMNLGETM---APMELGPYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADR 86
Query: 75 -YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLP 132
A A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P
Sbjct: 87 KLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYP 146
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL----------------------- 169
+R +EK C YY+RTG CKFG CKFHHPQPS++ A+
Sbjct: 147 LRANEKECAYYLRTGQCKFGSTCKFHHPQPSTMMVAVRGSVYSPGQSATSPGQHAYQGAV 206
Query: 170 ---PLTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP---TSIAG 218
PL+ +AS + S P SS Q G+V PGW+ Y IG S G
Sbjct: 207 TSWPLSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYTAQIGSSSSDDQQRTPG 264
Query: 219 SNLIYS-SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGT 264
+ Y+ SR G G G Q + + + +N+ PERPDQP+C++YM TG
Sbjct: 265 AAQYYTGSRQSGTAGIGDQGMFSSYQAGSVPVGLYAVQRENVFPERPDQPECQFYMKTGD 324
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDHP
Sbjct: 325 CKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDHPMG 384
Query: 325 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPD 384
YG + P S +SL A +H E SPD+ S + +SD+ Q P
Sbjct: 385 S--AMYGHASSPTSEAPTSL-RMLAHVPSHP-EVSPDSGSGRSRRIAHSDS----QQIPS 436
Query: 385 MKNSTTKNS 393
++ ST + +
Sbjct: 437 VERSTEREA 445
>gi|356568481|ref|XP_003552439.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 1 [Glycine max]
Length = 428
Score = 293 bits (749), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 159/372 (42%), Positives = 218/372 (58%), Gaps = 51/372 (13%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
V S D + +A+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFN
Sbjct: 9 VLTCSYDVVSDAMWQINLRSSE----TMESEPYPEHPGEPDCSYYIRTGLCRFGATCRFN 64
Query: 72 HP---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HP A A+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ N
Sbjct: 65 HPPNRKLAIAAARMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVALN 124
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL-----------PLT-GNA 175
ILG P+R +E C YY+RTG CKFG CKFHHPQP+++ ++ P T G+
Sbjct: 125 ILGYPLRPNEPECGYYLRTGQCKFGNTCKFHHPQPNNMVLSMRSSPVYPTVHSPTTPGHQ 184
Query: 176 SLGS-----MGSSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSN 220
S + SS +PS Q YA G+V GW+ Y G +G SP +
Sbjct: 185 SYATGITNWSSSSYIPSPRWQGPSSYAPLILPQGMVSVSGWSAYSGQMGSDSPQQTMANG 244
Query: 221 LIYSSRNQ------GDLGAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGTCK 266
Y + Q G GA +Q + +N+ PERPDQP+C++YM TG CK
Sbjct: 245 QSYGTSRQSEPANSGSQGAYSQFRSGSVPVGFYALQRENIFPERPDQPECQFYMKTGDCK 304
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
+GA C+FHHP ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP +
Sbjct: 305 FGAVCRFHHPHERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMGVF 364
Query: 327 PINYGLSLPPLS 338
Y +S PL+
Sbjct: 365 --TYNMSASPLA 374
>gi|359476781|ref|XP_003631888.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Vitis vinifera]
Length = 393
Score = 292 bits (747), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 151/329 (45%), Positives = 201/329 (61%), Gaps = 35/329 (10%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ ++ PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 26 QDAMWQMNLRSSE----TMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAI 81
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG VS NILG P+R D
Sbjct: 82 ATARMKGEFPERMGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPD 141
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSG------- 189
E C YY+RTG CKFG CKFHHPQPSS+ +L G+ S+ S P
Sbjct: 142 EIDCAYYLRTGQCKFGSTCKFHHPQPSSMMVSL--RGSPVYPSVPSPTTPGQQSYAGGIT 199
Query: 190 ---LQYAGIVPAPGWNTYMGNIGPLSPTSIA-GSNLIYSSRNQGDLGAGAQMHILSASSQ 245
L A +P+P W +P+S A GS +S G + G + +
Sbjct: 200 NWPLSRASFIPSPRWQ---------APSSYATGSQGTFSPYRSGSVPIG----FYALQRE 246
Query: 246 NL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
N+ PERP QP+C++YM TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C
Sbjct: 247 NVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIF 306
Query: 305 YSMYGICKFGPTCRFDHPYAGYPINYGLS 333
YS YGICKFGP+C+FDHP + N S
Sbjct: 307 YSRYGICKFGPSCKFDHPMGIFAYNLSAS 335
>gi|168031758|ref|XP_001768387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680312|gb|EDQ66749.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 332
Score = 291 bits (746), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 155/334 (46%), Positives = 203/334 (60%), Gaps = 36/334 (10%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQ 78
EA W + + QEG Q PYP RPGEPDC++Y RTGLCG+G CR+NHP AA
Sbjct: 1 EAGWAMAM-QGQEGVDGGQG-PYPERPGEPDCVYYMRTGLCGFGMTCRYNHPPNRKLAAA 58
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDE 137
+ + E PER G P+C YYLKTGTCK+G+TCKYHHP+++ G+ G V N+LGLP+R E
Sbjct: 59 ATRGKGEYPERVGHPECQYYLKTGTCKFGATCKYHHPREKAGSTGRVHLNVLGLPLRLGE 118
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS--MGSSVLPSSGLQ---- 191
K C YYMRTGSCK+GV CKFHHPQP+++G +PL + + S + S P +Q
Sbjct: 119 KECAYYMRTGSCKYGVTCKFHHPQPATVGGMVPLPFGSGVPSWPLTRSPFPLPRMQAPSS 178
Query: 192 -------YAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS 244
GI+ GWN Y + GP+ P ++ QG+ +G ++ +S+
Sbjct: 179 YGTMMPLQQGIMSMAGWN-YQVSQGPVGPAEGHQQGYVFGGAPQGEHVSGYGPYMQGSSA 237
Query: 245 QNLP----------------ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
LP ERP QP+C+YYM TG CK+G+ C++HHPK+R S ++
Sbjct: 238 VGLPAHQATQAVGGQETVFPERPGQPECQYYMKTGDCKFGSTCRYHHPKDRATPSPTCHL 297
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P+GLP RPG CS YS YGICKFGPTC+FDHP
Sbjct: 298 SPMGLPLRPGNPPCSFYSRYGICKFGPTCKFDHP 331
>gi|115485469|ref|NP_001067878.1| Os11g0472000 [Oryza sativa Japonica Group]
gi|113645100|dbj|BAF28241.1| Os11g0472000, partial [Oryza sativa Japonica Group]
Length = 414
Score = 291 bits (745), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 175/411 (42%), Positives = 227/411 (55%), Gaps = 65/411 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YA 76
+ EA+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 5 VGEAMWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMA 58
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQ 135
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R
Sbjct: 59 VAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRP 118
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL-------------------------- 169
+EK C YY+RTG CKFG CKFHHPQPS+ A+
Sbjct: 119 NEKECAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNW 178
Query: 170 PLTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP----TSIAGSN 220
PL+ +AS + S P SS Q G+V PGWN Y IG S + G+
Sbjct: 179 PLSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQ 236
Query: 221 LIYSSR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKY 267
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+
Sbjct: 237 YYTGSRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKF 296
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 327
GA CKFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP
Sbjct: 297 GAVCKFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGT-- 354
Query: 328 INYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
+ YGL+ P D S A HS E SPD S + +SD+ +
Sbjct: 355 VMYGLATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 402
>gi|356535246|ref|XP_003536159.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Glycine max]
Length = 421
Score = 290 bits (742), Expect = 9e-76, Method: Compositional matrix adjust.
Identities = 156/344 (45%), Positives = 206/344 (59%), Gaps = 44/344 (12%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AY 75
N ++++W + N G + YP RPGEPDC +Y RTGLC +G+ CRFNHP
Sbjct: 14 NPQDSLWMM----NLRTGETMDSGSYPERPGEPDCSYYMRTGLCRFGATCRFNHPPNRKL 69
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
A A+ E PER GQP+C YYLKTGTCK+G+TCK+HHPKD+ G AG V+ NILG P+R
Sbjct: 70 AIATARMIGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDQAGIAGRVALNILGYPLR 129
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL---PL-------TGNASLGSMGSSV 184
+E C YY+RTG CKFG CKFHHPQPS++ +L P+ T G +
Sbjct: 130 PNEPECTYYLRTGQCKFGNTCKFHHPQPSNMMLSLRGSPVYPTVHSPTTPGQQSYAGGTY 189
Query: 185 LPSSGLQ----YA------GIVPAPGWNTYMGNIGPLS----PTSIAGSNLIYSSRNQGD 230
+PS Q YA G+V PGW+ Y G +G +S P + Y + QG+
Sbjct: 190 IPSPRWQGPSSYAPLILPQGVVSVPGWSAYSGQMGSISTSDSPQQAMRNGQTYGTSRQGE 249
Query: 231 L----GAGAQMH-------ILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
L GA +Q + +N+ PERP QP+C++YM TG CK+GA C+FHHP+E
Sbjct: 250 LAGSQGAYSQFRSGTVPVGFYTLQRENIFPERPGQPECQFYMKTGDCKFGAVCRFHHPQE 309
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
R+ + + P+GLP RPG+ +C YS YGICKFGP+C+FDHP
Sbjct: 310 RLVPAPNCVLSPIGLPLRPGEPLCVFYSRYGICKFGPSCKFDHP 353
>gi|224146159|ref|XP_002325901.1| predicted protein [Populus trichocarpa]
gi|222862776|gb|EEF00283.1| predicted protein [Populus trichocarpa]
Length = 414
Score = 288 bits (738), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 151/359 (42%), Positives = 205/359 (57%), Gaps = 57/359 (15%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQ 78
+A+W++ + ++ +A PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 1 DAMWQMNLRSSE----TMEAGPYPERPGEPDCSYYIRTGLCRFGPTCRFNHPPNRKLAIA 56
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G+TCK+HHP+D+ G +G VS NILG P+R +E
Sbjct: 57 AARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGVSGRVSLNILGYPLRLNE 116
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSS-----GLQY 192
C YY+RTG CKFG CKFHHPQP+++ +PL G+ ++ S P GL
Sbjct: 117 MECAYYLRTGQCKFGSTCKFHHPQPTNV--MVPLRGSPVYPTVNSPTTPGQQSYPGGLAT 174
Query: 193 -------------------------AGIVPAPGWNTYMGNIG----PLSPTSIAGSNLIY 223
G+V PGWN Y G +G P S S +
Sbjct: 175 NWSRASFITSPRWQAPSNYTPLILPQGVVSVPGWNAYSGQVGSVSSPESQQQTGNSQIYG 234
Query: 224 SSRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGAD 270
+SR + AG+Q M + +++ PERP QP+C++YM TG CK+GA
Sbjct: 235 TSRQNESVNAGSQGTFSPYRSDSVPMGFYALQRESVFPERPGQPECQFYMKTGDCKFGAV 294
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 329
C+FHHP+ER+ + + +GLP RPG+ +C YS YGICKFGP+C+F HP + N
Sbjct: 295 CRFHHPRERLIPAPDCVLSAIGLPLRPGEPLCIFYSRYGICKFGPSCKFHHPMGIFTYN 353
>gi|356576638|ref|XP_003556437.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Glycine max]
Length = 416
Score = 288 bits (736), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 156/359 (43%), Positives = 212/359 (59%), Gaps = 41/359 (11%)
Query: 7 VKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGS 66
+++N N N ++++W + N G + YP RPGEPDC +Y RTGLC +G+
Sbjct: 1 METNNNLNLIVPNPQDSLWMM----NLRTGETMDSGSYPERPGEPDCSYYIRTGLCRFGA 56
Query: 67 NCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AG 122
CRFNHP A A+ E PER GQP+C YYLKTGTCK+G+TCK+HHPKD+ G AG
Sbjct: 57 TCRFNHPPNRRLAIATARMIGEFPERIGQPECQYYLKTGTCKFGATCKFHHPKDQAGIAG 116
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL----PLTGNASLG 178
V+ NILG P+R +E C YY+RTG CKFG CKFHHPQPS++ +L G +
Sbjct: 117 RVALNILGYPLRPNEPECTYYLRTGQCKFGNTCKFHHPQPSNMMLSLRGQESYAGGITNW 176
Query: 179 SMGSSVLPSSGLQY----------AGIVPAPGWNTYMGNIGPLS----PTSIAGSNLIYS 224
S GS + PS Q G+V PGW+ Y G +G +S P + Y
Sbjct: 177 SRGSYI-PSPRWQGPSSYGPLILPQGVVSVPGWSAYSGQMGSISTSDSPQQAMRNGQTYE 235
Query: 225 SRNQGDLG-AGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGAD 270
+ +QG+L AG+Q + + +N+ PERP QP+C++Y+ TG CK+GA
Sbjct: 236 TSHQGELANAGSQGAYSQFRSGTVPVGFYTLQRENIFPERPGQPECQFYVKTGDCKFGAV 295
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 329
C+FHHP+ER+ + + P+GLP R G+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 296 CQFHHPRERLIPAPDCVLSPIGLPLRLGEPLCVFYSRYGICKFGPSCKFDHPMEIFSYN 354
>gi|108864369|gb|ABG22481.1| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
gi|218185712|gb|EEC68139.1| hypothetical protein OsI_36059 [Oryza sativa Indica Group]
Length = 406
Score = 287 bits (735), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 173/407 (42%), Positives = 224/407 (55%), Gaps = 65/407 (15%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGA 80
+W++ + + E G PYP R GEPDC +Y RTGLC +G C+FNHPA A A
Sbjct: 1 MWQMNLGEAMEAG------PYPERIGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVAAA 54
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +EK
Sbjct: 55 RMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRVQLNALGYPLRPNEKE 114
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTAL--------------------------PLTG 173
C YY+RTG CKFG CKFHHPQPS+ A+ PL+
Sbjct: 115 CAYYLRTGQCKFGSTCKFHHPQPSNTMVAVRGSVYSPGQSVTSPSQHTYPGAVTNWPLSR 174
Query: 174 NASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP----TSIAGSNLIYS 224
+AS + S P SS Q G+V PGWN Y IG S + G+
Sbjct: 175 SASF--IASPRWPGHSSYAQVIVPPGLVQVPGWNPYAAQIGSSSSDDQQRTAGGAQYYTG 232
Query: 225 SR-----NQGDLG------AGAQ-MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADC 271
SR N GD G AG+ + + + +++ PERPDQP+C++YM TG CK+GA C
Sbjct: 233 SRHSETPNMGDQGMFSSYQAGSVPLGLYTVQRESIFPERPDQPECQFYMKTGDCKFGAVC 292
Query: 272 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYG 331
KFHHPKERI + + LGLP RPG+ IC+ YS YGICKFGP C+FDHP + YG
Sbjct: 293 KFHHPKERIIPTPNCALSSLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGT--VMYG 350
Query: 332 LSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
L+ P D S A HS E SPD S + +SD+ +
Sbjct: 351 LATSPTG--DVSARRMLAPVPAHS-EVSPDNVSGRSRRITHSDSQQI 394
>gi|226493386|ref|NP_001141157.1| hypothetical protein [Zea mays]
gi|194702984|gb|ACF85576.1| unknown [Zea mays]
gi|224030547|gb|ACN34349.1| unknown [Zea mays]
gi|407232624|gb|AFT82654.1| C3H11 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413920883|gb|AFW60815.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 443
Score = 287 bits (734), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 169/423 (39%), Positives = 226/423 (53%), Gaps = 72/423 (17%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+ D + EA+W++ + + E G PYP R GEPDC +Y RTG+C +G C+FN
Sbjct: 25 IGVHGVDQVAEAMWQMNLEEAMELG------PYPERVGEPDCSYYMRTGMCRFGMTCKFN 78
Query: 72 HPA---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HPA A A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N
Sbjct: 79 HPADRKLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLN 138
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL------------------ 169
LG P+R +EK C YY+RTG CKFG CKFHH QPS++ A+
Sbjct: 139 ELGYPLRPNEKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAVRGSVYSPGQSATSPGQHA 198
Query: 170 --------PLTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP--- 213
PL+ +AS + S P SS Q G+V PGW+ Y IG S
Sbjct: 199 YQGAVTSWPLSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYTAQIGSSSSEDQ 256
Query: 214 -----------------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPD 255
TSI G ++SS G + G + + +NL PERPDQP+
Sbjct: 257 QRTPGAAQYYTGSRQSGTSI-GDQGMFSSYQAGSVPVG----LYAVQRENLFPERPDQPE 311
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C++YM TG CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP
Sbjct: 312 CQFYMKTGDCKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGP 371
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 375
C+FDHP YG + P S + + +H E SPD S + +SD+
Sbjct: 372 NCKFDHPMGN--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDS 428
Query: 376 VSV 378
+
Sbjct: 429 QQI 431
>gi|212275512|ref|NP_001130819.1| uncharacterized protein LOC100191923 [Zea mays]
gi|194690198|gb|ACF79183.1| unknown [Zea mays]
gi|195614544|gb|ACG29102.1| zinc finger CCCH type domain-containing protein ZFN-like [Zea mays]
gi|223942913|gb|ACN25540.1| unknown [Zea mays]
gi|223949665|gb|ACN28916.1| unknown [Zea mays]
gi|238010126|gb|ACR36098.1| unknown [Zea mays]
gi|407232630|gb|AFT82657.1| C3H19 transcription factor, partial [Zea mays subsp. mays]
gi|414588297|tpg|DAA38868.1| TPA: putative Zinc finger CCCH type domain-containing protein ZFN
[Zea mays]
Length = 443
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 171/434 (39%), Positives = 235/434 (54%), Gaps = 68/434 (15%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+ D + EA+W++ + D E G PYP R G+PDC +Y RTG+C +G C+FN
Sbjct: 25 IGAHGVDQVTEAMWQMNLGDAMELG------PYPERVGDPDCSYYMRTGMCRFGMTCKFN 78
Query: 72 HPA---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HPA A A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N
Sbjct: 79 HPADRKLAVAAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLN 138
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL------------------ 169
LG P+R +EK C YY+RTG CKFG CKFHHPQPS++ A+
Sbjct: 139 ELGYPLRLNEKECAYYLRTGQCKFGSTCKFHHPQPSTMMVAVRGSVYSPGQSATSPGHHA 198
Query: 170 --------PLTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP--- 213
PL+ +AS + S P SS Q G+V PGW+ Y IG S
Sbjct: 199 YQGAVTSWPLSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYAAQIGSSSSDDQ 256
Query: 214 TSIAGSNLIYS-SRNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYY 259
G+ Y+ SR G G G + + + + ++N+ PERPDQP+C++Y
Sbjct: 257 QRTPGAAQYYTGSRQSGTPGIGDRGMFSSYQAGSVPVGLYAVQTENVFPERPDQPECQFY 316
Query: 260 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 319
M TG CK+G+ CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+F
Sbjct: 317 MKTGDCKFGSVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKF 376
Query: 320 DHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQ 379
HP G P+ YG + P S +S E SPD+ S + +SD+
Sbjct: 377 HHP-MGNPM-YGHASSPTSEAQTS--RRMLAHVPSHPEVSPDSGSGRSRRIVHSDS---- 428
Query: 380 HQNPDMKNSTTKNS 393
Q P ++ T + +
Sbjct: 429 QQIPSVERITEREA 442
>gi|224285149|gb|ACN40302.1| unknown [Picea sitchensis]
Length = 468
Score = 286 bits (731), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 163/398 (40%), Positives = 225/398 (56%), Gaps = 74/398 (18%)
Query: 20 IEEAIWRLKI---HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP--- 73
+EEA+W++ + H+N E A+ P+P RPGEPDC +Y RTGLCG+G +CRFNHP
Sbjct: 37 VEEAMWQMSLQQQHENME----AEVGPFPERPGEPDCTYYMRTGLCGFGMSCRFNHPPNR 92
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLP 132
AA A+ + E PER GQP+C YYLKTG+CK+G+TCK+HHP+D+ G+ G N+ G P
Sbjct: 93 KQAAAAARNKGEYPERLGQPECQYYLKTGSCKFGATCKFHHPRDKAGSTGRAVINVYGYP 152
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV-------- 184
+R +EK C YYMRTG CK+G CKFHHPQP S T +P+ G++ + S
Sbjct: 153 LRPNEKECAYYMRTGQCKYGATCKFHHPQPVS--TLVPVRGSSLFTPVHSPTTPGPQPYP 210
Query: 185 --LPSSGLQYA---------------------GIVPAPGWNTY-MGNIGPLSPT----SI 216
LP+ +Q A GI+P P W+TY G +G +S +
Sbjct: 211 GSLPTWPMQRAPFIQSPRWQGPSSYAPLILPQGIMPVPSWSTYPPGQVGSISSSDGQQQA 270
Query: 217 AGSNLIYSSRNQGD-LGAGAQ-----------------MHILSASSQN---LPERPDQPD 255
G+ L+Y +Q D + +G Q + + S+S+Q PERP Q +
Sbjct: 271 MGAGLVYGPSSQTDPMASGIQGTLSHFPPGSPGMGPPTLQLPSSSAQRESMFPERPGQQE 330
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C++YM TG CK+G C++HHPKERI + LGLP RPG C+ ++ YGICKFG
Sbjct: 331 CQFYMKTGDCKFGMTCRYHHPKERIIPVPNCVLNSLGLPLRPGAPACTFFTRYGICKFGA 390
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISAT 353
TC+FDHP + +S P +D S+ HQ SA+
Sbjct: 391 TCKFDHPMGHSSYSQSISSP----IDISVGRHQIGSAS 424
>gi|449449625|ref|XP_004142565.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 367
Score = 285 bits (728), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 159/382 (41%), Positives = 218/382 (57%), Gaps = 30/382 (7%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPE 88
N G + + YP RPGEPDC +Y RTGLC +G+ CRFNHP A A+ + E PE
Sbjct: 2 NLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMKGEFPE 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
R GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG V+ NILG P+R E C YY+RTG
Sbjct: 62 RIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTG 121
Query: 148 SCKFGVACKFHHPQPSSLGTAL---PLTGNASLGSMGSSVLP--SSGLQYAGIVPAPGW- 201
CKFG CKFHHPQP+++ +L P+ + G P S+ A +P+P W
Sbjct: 122 QCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQ 181
Query: 202 --NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRY 258
++Y I P S+ G N LG+ + + +N+ PERP QP+C++
Sbjct: 182 GPSSYASLILPQGVLSVPGWNAF-----NDQLGSVSSSESPQQTRENVFPERPGQPECQF 236
Query: 259 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 318
YM TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+
Sbjct: 237 YMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCK 296
Query: 319 FDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
FDHP + N LS S+ Q + T S T+ + SS+ +A S
Sbjct: 297 FDHPMGIFTYN-------LSAASSANAPVQHLFGTSSGTTALNLSSE-----GLVEAGSA 344
Query: 379 QHQNPDMKNSTTKNSDDSSKVD 400
+ + + S SDD + +
Sbjct: 345 KPRRLSISESREMPSDDENDAE 366
>gi|307135987|gb|ADN33845.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 367
Score = 284 bits (727), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 153/347 (44%), Positives = 206/347 (59%), Gaps = 25/347 (7%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPE 88
N G + + YP RPGEPDC +Y RTGLC +G+ CRFNHP A A+ + E PE
Sbjct: 2 NLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMKGEFPE 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
R GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG V+ NILG P+R E C YY+RTG
Sbjct: 62 RIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTG 121
Query: 148 SCKFGVACKFHHPQPSSLGTAL---PLTGNASLGSMGSSVLP--SSGLQYAGIVPAPGW- 201
CKFG CKFHHPQP+++ +L P+ + G P S+ A +P+P W
Sbjct: 122 QCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQ 181
Query: 202 --NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRY 258
++Y I P S+ G N LG+ + + +N+ PERP QP+C++
Sbjct: 182 GPSSYASLILPQGVLSVPGWNAF-----NDQLGSVSSSESPQQTRENVFPERPGQPECQF 236
Query: 259 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 318
YM TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YGICKFGP+C+
Sbjct: 237 YMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCK 296
Query: 319 FDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSK 365
FDHP + N LS S+ Q + T S T+ + SS+
Sbjct: 297 FDHPMGIFTYN-------LSAASSANAPVQHLFGTSSGTTALNLSSE 336
>gi|223948513|gb|ACN28340.1| unknown [Zea mays]
gi|413920884|gb|AFW60816.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 441
Score = 283 bits (724), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 168/414 (40%), Positives = 224/414 (54%), Gaps = 72/414 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
+EA+W++ + + E G PYP R GEPDC +Y RTG+C +G C+FNHPA A
Sbjct: 32 QEAMWQMNLEEAMELG------PYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAV 85
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +
Sbjct: 86 AAARMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPN 145
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL--------------------------P 170
EK C YY+RTG CKFG CKFHH QPS++ A+ P
Sbjct: 146 EKECAYYLRTGQCKFGSTCKFHHSQPSTMMVAVRGSVYSPGQSATSPGQHAYQGAVTSWP 205
Query: 171 LTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSP------------ 213
L+ +AS + S P SS Q G+V PGW+ Y IG S
Sbjct: 206 LSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYTAQIGSSSSEDQQRTPGAAQY 263
Query: 214 --------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGT 264
TSI G ++SS G + G + + +NL PERPDQP+C++YM TG
Sbjct: 264 YTGSRQSGTSI-GDQGMFSSYQAGSVPVG----LYAVQRENLFPERPDQPECQFYMKTGD 318
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
CK+GA CKFHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDHP
Sbjct: 319 CKFGAVCKFHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDHPMG 378
Query: 325 GYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
YG + P S + + +H E SPD S + +SD+ +
Sbjct: 379 N--AMYGQAPSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 429
>gi|297828742|ref|XP_002882253.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata]
gi|297328093|gb|EFH58512.1| hypothetical protein ARALYDRAFT_477525 [Arabidopsis lyrata subsp.
lyrata]
Length = 397
Score = 282 bits (722), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 146/334 (43%), Positives = 196/334 (58%), Gaps = 37/334 (11%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ + + YP RPGEPDC +Y RTGLC +GS CRFNHP
Sbjct: 18 QDAMWQMNLSSDE----IMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVI 73
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ R E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +
Sbjct: 74 ATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSN 133
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ----Y 192
E C Y++RTG CKFG CKF+HPQP +P +G S +S + S Q Y
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSY 193
Query: 193 A------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 246
A G+VP GWN Y G +G +SP+ G++ Y + Q + S S N
Sbjct: 194 ASLIMPQGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQSQGSFSGFN 252
Query: 247 ------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
PERP QP+C++YM TG CK+G CKFHHP++R A +
Sbjct: 253 PGSSVPIGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLL 312
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+GLP RPG+ +C Y+ YGICKFGP+C+FDHP
Sbjct: 313 SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 22/39 (56%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 281
SS LP RP +P C +Y G CK+G CKF HP A
Sbjct: 313 SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFA 351
>gi|356568483|ref|XP_003552440.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
isoform 2 [Glycine max]
Length = 362
Score = 281 bits (720), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 147/328 (44%), Positives = 200/328 (60%), Gaps = 33/328 (10%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W++ + ++ ++ PYP PGEPDC +Y RTGLC +G+ CRFNHP A A
Sbjct: 1 MWQINLRSSE----TMESEPYPEHPGEPDCSYYIRTGLCRFGATCRFNHPPNRKLAIAAA 56
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ + E PER GQP+C YYLKTGTCK+G+TC++HHP+D+ G AG V+ NILG P+R +E
Sbjct: 57 RMKGEFPERIGQPECQYYLKTGTCKFGATCRFHHPRDKAGIAGRVALNILGYPLRPNEPE 116
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI---- 195
C YY+RTG CKFG CKFHHPQP+++ L + + ++ S P GI
Sbjct: 117 CGYYLRTGQCKFGNTCKFHHPQPNNM--VLSMRSSPVYPTVHSPTTPGHQSYATGITNWS 174
Query: 196 ----VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PER 250
+P+P W GP S S GS YS G + G + +N+ PER
Sbjct: 175 SSSYIPSPRWQ------GPSSYAS--GSQGAYSQFRSGSVPVG----FYALQRENIFPER 222
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 310
PDQP+C++YM TG CK+GA C+FHHP ER+ + + P+GLP RPG+ +C YS YGI
Sbjct: 223 PDQPECQFYMKTGDCKFGAVCRFHHPHERMIPAPDCVLSPIGLPLRPGEPLCVFYSRYGI 282
Query: 311 CKFGPTCRFDHPYAGYPINYGLSLPPLS 338
CKFGP+C+FDHP + Y +S PL+
Sbjct: 283 CKFGPSCKFDHPMGVF--TYNMSASPLA 308
>gi|18396338|ref|NP_566183.1| zinc finger CCCH domain-containing protein 33 [Arabidopsis
thaliana]
gi|62901378|sp|Q8GXX7.1|C3H33_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 33;
Short=AtC3H33; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN1
gi|26451016|dbj|BAC42614.1| putative zinc finger protein 1 zfn1 [Arabidopsis thaliana]
gi|109134113|gb|ABG25055.1| At3g02830 [Arabidopsis thaliana]
gi|332640343|gb|AEE73864.1| zinc finger CCCH domain-containing protein 33 [Arabidopsis
thaliana]
Length = 397
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 151/377 (40%), Positives = 213/377 (56%), Gaps = 38/377 (10%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ + YP RPGEPDC +Y RTGLC +GS CRFNHP
Sbjct: 18 QDAMWQMNLSSDE----TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVI 73
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ R E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +
Sbjct: 74 ATARMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSN 133
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ----Y 192
E C Y++RTG CKFG CKF+HPQP +P +G S +S + S Q Y
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSY 193
Query: 193 A------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 246
A G+VP GWN Y G +G +SP+ G++ Y + Q + S S N
Sbjct: 194 ASLIMPQGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQSQGSFSGYN 252
Query: 247 ------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
PERP QP+C++YM TG CK+G CKFHHP++R A +
Sbjct: 253 PGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLL 312
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQ 348
+GLP RPG+ +C Y+ YGICKFGP+C+FDHP + + S ++++S +
Sbjct: 313 SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETD-EVVETSTGKSR 371
Query: 349 AISATHSIETSPDASSK 365
+S + + + + +S K
Sbjct: 372 RLSVSETRQAATTSSGK 388
>gi|357156748|ref|XP_003577563.1| PREDICTED: zinc finger CCCH domain-containing protein 63-like
isoform 2 [Brachypodium distachyon]
Length = 447
Score = 281 bits (720), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 167/436 (38%), Positives = 227/436 (52%), Gaps = 70/436 (16%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+ + D + A+W + + ++ E G YP R GEPDC +Y RTGLC +G C+FN
Sbjct: 29 IGSHRVDGVTAAMWHMSLGESMEAG------LYPERVGEPDCSYYMRTGLCRFGMTCKFN 82
Query: 72 HPA---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFN 127
HPA A A+ + E P+R GQP+C YYLKTG CK+G+TCK+HHP+++ A V N
Sbjct: 83 HPADRKMAVAAARMKGEYPQRIGQPECQYYLKTGMCKFGATCKFHHPREKAAMATRVQLN 142
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL------------------ 169
+LG P+R +EK C YY+RTG CKFG CKF+HPQPS+ AL
Sbjct: 143 VLGYPLRPNEKECSYYLRTGQCKFGSTCKFNHPQPSNTMVALRGSVFSPGQSATSPSQHT 202
Query: 170 --------PLTGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSPTS- 215
PL+ +AS + S P SS Q G+V PGW+ Y +G S
Sbjct: 203 YSGSVTNWPLSRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYAAQLGSSSSDDQ 260
Query: 216 --IAGSNLIYSSRNQGDLGAGAQMHILSASSQN---------------LPERPDQPDCRY 258
+G+ Y+ Q + G H + +S Q+ P+RPDQP+C++
Sbjct: 261 GRSSGAAQYYTGSRQSET-QGMSDHGMISSYQHGSVPAGLYAVQREYIFPDRPDQPECQF 319
Query: 259 YMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCR 318
YM TG CK+GA CKFHHPKERI S + + PLGLP R G+ IC+ YS YGICKFGP C+
Sbjct: 320 YMKTGDCKFGAVCKFHHPKERIIPSPSCALSPLGLPLRSGEPICTFYSRYGICKFGPNCK 379
Query: 319 FDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
FDHP + YGL+ P + + H E P SS + ++D
Sbjct: 380 FDHPMGT--VMYGLATSPTGEVPTG--RHMLAPVPALSEVPPGNSSGRSRRMTHADT--- 432
Query: 379 QHQNPDMKNSTTKNSD 394
Q P + ST + +
Sbjct: 433 -QQTPSTERSTEREAS 447
>gi|115488274|ref|NP_001066624.1| Os12g0405100 [Oryza sativa Japonica Group]
gi|122204753|sp|Q2QT65.1|C3H66_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 66;
Short=OsC3H66
gi|77554746|gb|ABA97542.1| Zinc finger CCCH type domain containing protein ZFN, putative,
expressed [Oryza sativa Japonica Group]
gi|113649131|dbj|BAF29643.1| Os12g0405100 [Oryza sativa Japonica Group]
gi|215767059|dbj|BAG99287.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616953|gb|EEE53085.1| hypothetical protein OsJ_35844 [Oryza sativa Japonica Group]
Length = 454
Score = 281 bits (718), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 157/381 (41%), Positives = 207/381 (54%), Gaps = 65/381 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
EEA+W++ + GG +++PYP R GEPDC +Y RTGLC +G C+FNHP A
Sbjct: 44 EEAMWQMTL----GGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAV 99
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N+LG PMR +
Sbjct: 100 AAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPN 159
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP---LTGNASLGSMGSSVLPSSGLQYA 193
EK C YY+RTG CKF CKFHHPQPS+ A+ + S S G P + +
Sbjct: 160 EKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAVTNWT 219
Query: 194 --------------------------GIVPAPGWNTYMGNIGPLSP-------------- 213
G+V PGWN Y +G SP
Sbjct: 220 LSRSASFIASPRWPGHSGYAQVIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTTQYYG 279
Query: 214 -----TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKY 267
T G + +Y S G + G + + +N+ PERPDQP+C++YM TG CK+
Sbjct: 280 SRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFPERPDQPECQFYMKTGDCKF 335
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 327
GA CKFHHPKER+ + + LGLP RPG+ +C+ YS YGICKFGP C+FDHP
Sbjct: 336 GAVCKFHHPKERLVPAPNCALNSLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMG--T 393
Query: 328 INYGLSLPPLSILDSSLMNHQ 348
+ YG + P D S M++Q
Sbjct: 394 LMYGSATSPRG--DVSSMHYQ 412
>gi|413920885|gb|AFW60817.1| hypothetical protein ZEAMMB73_909252 [Zea mays]
Length = 407
Score = 279 bits (714), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 163/406 (40%), Positives = 218/406 (53%), Gaps = 62/406 (15%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGA 80
+W++ + + E G PYP R GEPDC +Y RTG+C +G C+FNHPA A A
Sbjct: 1 MWQMNLEEAMELG------PYPERVGEPDCSYYMRTGMCRFGMTCKFNHPADRKLAVAAA 54
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ + E P+R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N LG P+R +EK
Sbjct: 55 RMKGEYPQRIGQPECQYYLKTGTCKFGATCKFHHPREKAAMATRVQLNELGYPLRPNEKE 114
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTAL--------------------------PLTG 173
C YY+RTG CKFG CKFHH QPS++ A+ PL+
Sbjct: 115 CAYYLRTGQCKFGSTCKFHHSQPSTMMVAVRGSVYSPGQSATSPGQHAYQGAVTSWPLSR 174
Query: 174 NASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSPTS---IAGSNLIYSS 225
+AS + S P SS Q G+V PGW+ Y IG S G+ Y+
Sbjct: 175 SASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYTAQIGSSSSEDQQRTPGAAQYYTG 232
Query: 226 RNQGDLGAGAQ------------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCK 272
Q G Q + + + +NL PERPDQP+C++YM TG CK+GA CK
Sbjct: 233 SRQSGTSIGDQGMFSSYQAGSVPVGLYAVQRENLFPERPDQPECQFYMKTGDCKFGAVCK 292
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 332
FHHP+ERI + + PLGLP RPG+ ICS Y+ YG+CKFGP C+FDHP YG
Sbjct: 293 FHHPRERIIPTPNCALSPLGLPLRPGEPICSFYNRYGMCKFGPNCKFDHPMGN--AMYGQ 350
Query: 333 SLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSV 378
+ P S + + +H E SPD S + +SD+ +
Sbjct: 351 APSPASEAPAPRRMLAHVPPSHP-EASPDGGSGRSRRIAHSDSQQI 395
>gi|297598193|ref|NP_001045201.2| Os01g0917400 [Oryza sativa Japonica Group]
gi|62901482|sp|Q5JLB5.2|C3H12_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 12;
Short=OsC3H12; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 2
gi|57900442|dbj|BAD87735.1| putative zinc finger protein [Oryza sativa Japonica Group]
gi|215704392|dbj|BAG93826.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255674001|dbj|BAF07115.2| Os01g0917400 [Oryza sativa Japonica Group]
gi|343466345|gb|AEM43044.1| CCCH-type zinc finger protein [Oryza sativa Indica Group]
Length = 439
Score = 279 bits (713), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 156/356 (43%), Positives = 197/356 (55%), Gaps = 52/356 (14%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
E +W+ G G Q PYP R GEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 58 EGMWQ---QMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 114
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R E
Sbjct: 115 SARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSE 174
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTAL------------PLTGN-ASLGS 179
K C YY++TG CK+G CKFHHP+ SS G+ + P TG AS
Sbjct: 175 KECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAF 234
Query: 180 MGSSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYSS 225
S +PS Q YA G+V P WN+Y G + P+S + G+ Y +
Sbjct: 235 PRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGT 294
Query: 226 RNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCK 272
Q D AG Q + S + PERPDQP+C+YYM TG CK+GA CK
Sbjct: 295 SQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCK 354
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
FHHP+ R + + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 355 FHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 410
>gi|357156745|ref|XP_003577562.1| PREDICTED: zinc finger CCCH domain-containing protein 63-like
isoform 1 [Brachypodium distachyon]
Length = 445
Score = 278 bits (712), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 167/426 (39%), Positives = 224/426 (52%), Gaps = 70/426 (16%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
EA+W + + ++ E G YP R GEPDC +Y RTGLC +G C+FNHPA A
Sbjct: 37 EAMWHMSLGESMEAG------LYPERVGEPDCSYYMRTGLCRFGMTCKFNHPADRKMAVA 90
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E P+R GQP+C YYLKTG CK+G+TCK+HHP+++ A V N+LG P+R +E
Sbjct: 91 AARMKGEYPQRIGQPECQYYLKTGMCKFGATCKFHHPREKAAMATRVQLNVLGYPLRPNE 150
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL--------------------------PL 171
K C YY+RTG CKFG CKF+HPQPS+ AL PL
Sbjct: 151 KECSYYLRTGQCKFGSTCKFNHPQPSNTMVALRGSVFSPGQSATSPSQHTYSGSVTNWPL 210
Query: 172 TGNASLGSMGSSVLP--SSGLQYA---GIVPAPGWNTYMGNIGPLSPTS---IAGSNLIY 223
+ +AS + S P SS Q G+V PGW+ Y +G S +G+ Y
Sbjct: 211 SRSASF--IASPRWPGHSSYAQVIVPPGLVQVPGWSPYAAQLGSSSSDDQGRSSGAAQYY 268
Query: 224 SSRNQGDLGAGAQMHILSASSQN---------------LPERPDQPDCRYYMNTGTCKYG 268
+ Q + G H + +S Q+ P+RPDQP+C++YM TG CK+G
Sbjct: 269 TGSRQSET-QGMSDHGMISSYQHGSVPAGLYAVQREYIFPDRPDQPECQFYMKTGDCKFG 327
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
A CKFHHPKERI S + + PLGLP R G+ IC+ YS YGICKFGP C+FDHP +
Sbjct: 328 AVCKFHHPKERIIPSPSCALSPLGLPLRSGEPICTFYSRYGICKFGPNCKFDHPMGT--V 385
Query: 329 NYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNS 388
YGL+ P + + H E P SS + ++D Q P + S
Sbjct: 386 MYGLATSPTGEVPTG--RHMLAPVPALSEVPPGNSSGRSRRMTHADT----QQTPSTERS 439
Query: 389 TTKNSD 394
T + +
Sbjct: 440 TEREAS 445
>gi|6728979|gb|AAF26977.1|AC018363_22 zinc finger protein 1 (zfn1) [Arabidopsis thaliana]
Length = 377
Score = 278 bits (712), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 150/374 (40%), Positives = 210/374 (56%), Gaps = 38/374 (10%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W++ + ++ + YP RPGEPDC +Y RTGLC +GS CRFNHP A
Sbjct: 1 MWQMNLSSDE----TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNHPRDRELVIATA 56
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
+ R E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +E
Sbjct: 57 RMRGEYPERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVD 116
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ----YA-- 193
C Y++RTG CKFG CKF+HPQP +P +G S +S + S Q YA
Sbjct: 117 CAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSYASL 176
Query: 194 ----GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN--- 246
G+VP GWN Y G +G +SP+ G++ Y + Q + S S N
Sbjct: 177 IMPQGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQSQGSFSGYNPGS 235
Query: 247 ---------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 291
PERP QP+C++YM TG CK+G CKFHHP++R A + +
Sbjct: 236 SVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLLSSI 295
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS 351
GLP RPG+ +C Y+ YGICKFGP+C+FDHP + + S ++++S + +S
Sbjct: 296 GLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETD-EVVETSTGKSRRLS 354
Query: 352 ATHSIETSPDASSK 365
+ + + + +S K
Sbjct: 355 VSETRQAATTSSGK 368
>gi|125528863|gb|EAY76977.1| hypothetical protein OsI_04935 [Oryza sativa Indica Group]
Length = 440
Score = 277 bits (709), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 155/357 (43%), Positives = 197/357 (55%), Gaps = 53/357 (14%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
E +W+ G G Q PYP R GEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 58 EGMWQ---QMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIA 114
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R E
Sbjct: 115 SARMKGEYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSE 174
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQ--------------PS--SLGTALPLTGNASLGSMG 181
K C YY++TG CK+G CKFHHP+ PS S TA P + ++ S
Sbjct: 175 KECAYYLKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPSYTGTMASWA 234
Query: 182 ---SSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYS 224
S +PS Q YA G+V P WN+Y G + P+S + G+ Y
Sbjct: 235 FPRGSFIPSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYG 294
Query: 225 SRNQGDLGAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADC 271
+ Q D AG Q + S + PERPDQP+C+YYM TG CK+GA C
Sbjct: 295 TSQQVDASAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVC 354
Query: 272 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
KFHHP+ R + + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 355 KFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 411
>gi|4928917|gb|AAD33769.1|AF138743_1 zinc finger protein 1 [Arabidopsis thaliana]
Length = 424
Score = 277 bits (709), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 149/377 (39%), Positives = 211/377 (55%), Gaps = 38/377 (10%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ + YP RPGEPDC +Y RTGLC +GS CR NHP
Sbjct: 18 QDAMWQMNLSSDE----TMETGSYPERPGEPDCSYYIRTGLCRFGSTCRVNHPRDRELVI 73
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ R E PER G P+C YYLKTGTCK+G TCK+HHP+++ G AG VS N+LG P+R +
Sbjct: 74 ATARMRGEYPERIGHPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSN 133
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ----Y 192
E C Y++RTG CKFG CKF+HPQP +P +G S +S + S Q Y
Sbjct: 134 EVDCAYFLRTGHCKFGGTCKFNHPQPQPTNMMVPTSGQQSYPWSRASFIASPRWQDPSSY 193
Query: 193 A------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN 246
A G+VP GWN Y G +G +SP+ G++ Y + Q + S S N
Sbjct: 194 ASLIMPQGVVPVQGWNPYSGQLGSVSPSG-TGNDQNYRNLQQNETIESGSQSQGSFSGYN 252
Query: 247 ------------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
PERP QP+C++YM TG CK+G CKFHHP++R A +
Sbjct: 253 PGSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQAPPPDCLL 312
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQ 348
+GLP RPG+ +C Y+ YGICKFGP+C+FDHP + + S ++++S +
Sbjct: 313 SSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHPMRVFTYDNTASETD-EVVETSTGKSR 371
Query: 349 AISATHSIETSPDASSK 365
+S + + + + +S K
Sbjct: 372 RLSVSETRQAATTSSGK 388
>gi|222619758|gb|EEE55890.1| hypothetical protein OsJ_04549 [Oryza sativa Japonica Group]
Length = 380
Score = 276 bits (705), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 154/343 (44%), Positives = 193/343 (56%), Gaps = 49/343 (14%)
Query: 35 GGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGAQYREELPERNG 91
G G Q PYP R GEPDC +Y RTGLC +G +CRFNHP A A+ + E PER G
Sbjct: 9 GSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHPQDRNLAIASARMKGEYPERMG 68
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCK 150
QP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R EK C YY++TG CK
Sbjct: 69 QPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCK 128
Query: 151 FGVACKFHHPQ-----PSSLGTAL------------PLTGN-ASLGSMGSSVLPSSGLQ- 191
+G CKFHHP+ SS G+ + P TG AS S +PS Q
Sbjct: 129 YGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFIPSPRWQN 188
Query: 192 ---YA------GIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYSSRNQGDLGAGAQMH 238
YA G+V P WN+Y G + P+S + G+ Y + Q D AG Q
Sbjct: 189 PSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQGM 248
Query: 239 ILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 285
+ S + PERPDQP+C+YYM TG CK+GA CKFHHP+ R +
Sbjct: 249 LSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPD 308
Query: 286 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+ P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 309 CVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 351
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 278 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+++ S + + P P R G+ C+ Y G+C+FG +CRF+HP
Sbjct: 3 QQMTMSGSGAMQPGPYPERSGEPDCTYYLRTGLCRFGMSCRFNHP 47
>gi|357154003|ref|XP_003576637.1| PREDICTED: zinc finger CCCH domain-containing protein 66-like
[Brachypodium distachyon]
Length = 442
Score = 273 bits (699), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 166/414 (40%), Positives = 212/414 (51%), Gaps = 66/414 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
EE +W++ + GG + PYP R GEPDC +Y RTGLC +G C+FNHP A
Sbjct: 28 TEETMWQMSLGG---GGESMEPGPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLA 84
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQ 135
A+ E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A N+LG P+R
Sbjct: 85 VAAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIATRAQLNVLGYPLRP 144
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG- 194
+EK C YY+RTG CKF CKFHHPQPSS A+ S+ S G S Y G
Sbjct: 145 NEKECAYYLRTGQCKFASTCKFHHPQPSSTMVAV----RGSMYSPGQSATSPGQNTYPGA 200
Query: 195 --------------------------------IVPAPGWNTYMGNIGPLSP---TSIAGS 219
IV PGWN Y IG SP G+
Sbjct: 201 VTNWNMSRSASFIASPRWPGHSGYAQVIVPQSIVQVPGWNPYAAQIGSSSPDDQQRTPGT 260
Query: 220 NLIYSSRNQ------GDLG-------AGAQMHILSASSQNL-PERPDQPDCRYYMNTGTC 265
YS Q GD G + + + N+ PERPDQP+C++YM TG C
Sbjct: 261 THYYSGSRQSETTGMGDHGMFPSYQAGSVPLGVYAVQGDNVFPERPDQPECQFYMKTGDC 320
Query: 266 KYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
K+GA CKF+HPKER+ + + PLGLP RPG+ +C+ YS YGICKFGP C+FDHP
Sbjct: 321 KFGAVCKFNHPKERMIPAPNCALSPLGLPLRPGEPVCTFYSRYGICKFGPNCKFDHPMGT 380
Query: 326 YPINYGLSLPPLSILDSSLMNHQ-AISATHSIETSPDASSKIPNWVQNSDAVSV 378
+ YG P S D +++Q A S HS S + V SD+ +
Sbjct: 381 --VMYGSVTSPTS--DVPTLHYQLAPSPGHSERLLDGGGSGRSHRVPQSDSQHI 430
>gi|194695912|gb|ACF82040.1| unknown [Zea mays]
gi|407232612|gb|AFT82648.1| C3H49 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|413951531|gb|AFW84180.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
Length = 427
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 200/362 (55%), Gaps = 58/362 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ ++ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 46 EEGMWQQMAMNS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 102
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+ +
Sbjct: 103 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPN 162
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNAS--------LGSMGSS 183
EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S G+M S
Sbjct: 163 EKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMSSW 222
Query: 184 VLPSSGL----------QYA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
P + YA G+V P WN+Y G + SP G+ Y S
Sbjct: 223 TFPRASFIPSPRWQSPSNYAPMVVPHGLVQVPSWNSYPGQL--QSP----GAQQTYGSSQ 276
Query: 228 QGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTGTCKYGADCKFH 274
QG+ AG Q + S + P ERPD+P+C+YYM TG CK+GA CKFH
Sbjct: 277 QGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCKFGAVCKFH 336
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN---YG 331
HP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ YG
Sbjct: 337 HPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAAPMGVYAYG 396
Query: 332 LS 333
S
Sbjct: 397 FS 398
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 309 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 368
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 369 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 399
>gi|226504596|ref|NP_001150019.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
gi|195636098|gb|ACG37517.1| zinc finger CCCH type domain-containing protein ZFN-like 2 [Zea
mays]
Length = 427
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 154/362 (42%), Positives = 200/362 (55%), Gaps = 58/362 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ ++ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 46 EEGMWQQMAMNS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 102
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+ +
Sbjct: 103 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPN 162
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNAS--------LGSMGSS 183
EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S G+M S
Sbjct: 163 EKECAYYLKTGQCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMSSW 222
Query: 184 VLPSSGL----------QYA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
P + YA G+V P WN+Y G + SP G+ Y S
Sbjct: 223 TFPRASFIPSPRWQSPSNYAPMVVPHGLVQVPSWNSYPGQL--QSP----GAQQTYGSSQ 276
Query: 228 QGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTGTCKYGADCKFH 274
QG+ AG Q + S + P ERPD+P+C+YYM TG CK+GA CKFH
Sbjct: 277 QGEASAGNQGMLSPYRSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCKFGAVCKFH 336
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN---YG 331
HP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ YG
Sbjct: 337 HPRVRSQPPPDCVLSPMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAAPMGVYAYG 396
Query: 332 LS 333
S
Sbjct: 397 FS 398
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 309 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 368
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 369 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 399
>gi|212721330|ref|NP_001132883.1| uncharacterized protein LOC100194377 [Zea mays]
gi|194695656|gb|ACF81912.1| unknown [Zea mays]
Length = 430
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 150/360 (41%), Positives = 195/360 (54%), Gaps = 55/360 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ D+ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMDS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R +
Sbjct: 107 ASARMKGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPN 166
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNAS--------LGSMGSS 183
EK C YY++TG CK+ CKFHHP+ PSS G+ + + ++S G+M S
Sbjct: 167 EKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMPSW 226
Query: 184 VLPSSGL----------QYA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
P + YA G+V P WN+Y G + G+ Y S
Sbjct: 227 AFPRASFIPSPRWQSPSNYAPMIVPQGLVQMPSWNSYTGQL------QSPGAQQTYGSSQ 280
Query: 228 QGDLGAGAQMHILSASSQNLP-------------ERPDQPDCRYYMNTGTCKYGADCKFH 274
QG+ G Q + S + P ERPD+P+C+YYM TG CK+GA CKFH
Sbjct: 281 QGEASTGNQGMLSPYRSSSFPVPQYALQRENVFPERPDEPECQYYMKTGDCKFGAVCKFH 340
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 334
HP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 341 HPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFDHPTVVAPMVYAYGF 400
>gi|255642812|gb|ACU21592.1| Zinc finger protein [Triticum aestivum]
Length = 435
Score = 271 bits (693), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 164/389 (42%), Positives = 213/389 (54%), Gaps = 57/389 (14%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ + G Q+ PYP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMSS---GATMQSGPYPVRPGEPDCTYYLRTGLCRFGMSCRFNHPQDRNTAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +
Sbjct: 107 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRPN 166
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTAL--PLTGNASLG------SMGS- 182
E+ C YY++TG CK+G CKF+HP+ SS G+ + P+ + S G +M S
Sbjct: 167 ERECAYYLKTGQCKYGNTCKFNHPEIFSAVASSRGSPIYPPVHNSGSTGPHSYTGTMASW 226
Query: 183 -----SVLPSSGLQY----------AGIVPAPGWNTYMGNIGPLS-PTSIA---GSNLIY 223
S +PS Q G+V P WN+Y G + P+S P S G+ Y
Sbjct: 227 TYPRGSFIPSPRWQSPSNYTPMIVPQGLVQVPNWNSYPGQMVPVSSPESRLQSPGAQQYY 286
Query: 224 SSRNQGDLGAGAQ-MHILSASSQN------------LPERPDQPDCRYYMNTGTCKYGAD 270
+ QG+ AG Q M SS PERPDQP+C YY+ TG CK+GA
Sbjct: 287 GTSRQGEASAGNQGMQSPYRSSSFPAPQYALQRENVFPERPDQPECIYYIKTGDCKFGAV 346
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG----Y 326
CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP A Y
Sbjct: 347 CKFHHPRVRSQPPPDCILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVY 406
Query: 327 PINYGLSLPPLSILDSSLMNHQAISATHS 355
Y S P + + L+ + SA S
Sbjct: 407 AYGYSASASPNAPMARRLLESPSGSAYAS 435
>gi|414879020|tpg|DAA56151.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 430
Score = 269 bits (687), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 149/361 (41%), Positives = 194/361 (53%), Gaps = 57/361 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ D+ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMDS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R +
Sbjct: 107 ASARMKGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPN 166
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMG----SSVLPS 187
EK C YY++TG CK+ CKFHHP+ PSS G+ + T S S G + +PS
Sbjct: 167 EKECAYYLKTGHCKYANTCKFHHPELFNVVPSSRGSPI-YTSVHSSASAGPQSYTGTMPS 225
Query: 188 SGLQYAGIVPAP---------------------GWNTYMGNIGPLSPTSIAGSNLIYSSR 226
A +P+P WN+Y G + G+ Y S
Sbjct: 226 WAFPRASFIPSPRWQSPSNYAPMIVPQGLVQMQSWNSYTGQL------QSPGAQQTYGSS 279
Query: 227 NQGDLGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKF 273
QG+ G Q + + +N+ PERPD+P+C+YYM TG CK+GA CKF
Sbjct: 280 QQGEASTGNQGMLSPYRPSSFPVPQYALQRENVFPERPDEPECQYYMKTGDCKFGAVCKF 339
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
HHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 340 HHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFDHPTVVAPMVYAYG 399
Query: 334 L 334
Sbjct: 400 F 400
>gi|224029745|gb|ACN33948.1| unknown [Zea mays]
gi|413951533|gb|AFW84182.1| hypothetical protein ZEAMMB73_594165 [Zea mays]
Length = 377
Score = 268 bits (686), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 151/347 (43%), Positives = 193/347 (55%), Gaps = 55/347 (15%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGAQYREELPERNGQ 92
G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A A+ + E PER GQ
Sbjct: 8 GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARMKGEYPERVGQ 67
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
P+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+ +EK C YY++TG CK+
Sbjct: 68 PECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLLPNEKECAYYLKTGQCKY 127
Query: 152 GVACKFHHPQ-----PSSLGTALPLTGNAS--------LGSMGSSVLPSSGL-------- 190
CKFHHP+ PSS G+ + + ++S G+M S P +
Sbjct: 128 ANTCKFHHPELFNVVPSSRGSPIYTSVHSSASAGPQSYTGTMSSWTFPRASFIPSPRWQS 187
Query: 191 --QYA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSA 242
YA G+V P WN+Y G + SP G+ Y S QG+ AG Q +
Sbjct: 188 PSNYAPMVVPHGLVQVPSWNSYPGQL--QSP----GAQQTYGSSQQGEASAGNQGMLSPY 241
Query: 243 SSQNLP-------------ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
S + P ERPD+P+C+YYM TG CK+GA CKFHHP+ R +
Sbjct: 242 RSSSFPVPQYALQRDNVFPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLS 301
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN---YGLS 333
P+GLP RPG+ +C YS YGICKFG C+FDHP P+ YG S
Sbjct: 302 PMGLPIRPGEELCKFYSRYGICKFGANCKFDHPTMAAPMGVYAYGFS 348
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ----GAQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 259 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 318
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 319 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 349
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++A ++ + + P P RPG+ C+ Y G+C+FG +CRF+HP
Sbjct: 2 KMAMNSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHP 45
>gi|326503628|dbj|BAJ86320.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 153/369 (41%), Positives = 201/369 (54%), Gaps = 56/369 (15%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQ 78
EA W++ + GG + PYP R GE DC +Y RTG C +G C+FNHPA A
Sbjct: 32 EATWQMTLGC---GGLSMEPGPYPERIGERDCSYYMRTGFCRFGVTCKFNHPADRKLAVA 88
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDE 137
A+ + E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A N+LG P+R +E
Sbjct: 89 AARMKGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAAIAISAQLNVLGYPLRLNE 148
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL------PLTGNASLG------------- 178
K C YY+RTG CKF CKFHHPQPSS A+ P S G
Sbjct: 149 KECVYYLRTGQCKFASTCKFHHPQPSSTMVAIRSSICSPGQSTTSPGQNTYSGAVTNWSL 208
Query: 179 SMGSSVLPS------SGLQYA----GIVPAPGWNTYMGNIGPLS---PTSIAGSNLIYSS 225
S +S + S SG + G+V PGWN Y +G S G+ Y +
Sbjct: 209 SRSASFIASPRWPGPSGYEQVIVPQGLVQVPGWNPYAAQMGSSSLDGQQRTPGTAHYYGT 268
Query: 226 RNQGDLGAG------------AQMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCK 272
+ G G A + + + +N PERP+QP+C++YM TG CK+GA CK
Sbjct: 269 HQRETTGMGEHGMFTSHKAGSAPLGVYAVQGENTFPERPEQPECQFYMKTGDCKFGAVCK 328
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA----GYPI 328
F+HPK+R+ + + PLGLP RPG+ IC+ YS YGICKFGP C+FDHP G P
Sbjct: 329 FNHPKKRMVPAPNCALSPLGLPLRPGEPICTFYSRYGICKFGPNCKFDHPMGTILYGSPT 388
Query: 329 NYGLSLPPL 337
+ +PPL
Sbjct: 389 SPTGDVPPL 397
>gi|326503048|dbj|BAJ99149.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 383
Score = 265 bits (677), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 159/374 (42%), Positives = 209/374 (55%), Gaps = 54/374 (14%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAAQGAQYREELPERNGQ 92
G Q+ PYP RPGEPDC +Y RTGLC +G +CRFNHP A A+ + E PER GQ
Sbjct: 10 GVTMQSGPYPVRPGEPDCTYYLRTGLCRFGMSCRFNHPQDRNTAIASARMKGEYPERVGQ 69
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
P+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +E+ C YY++TG CK+
Sbjct: 70 PECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNALGYPLRPNERECAYYLKTGQCKY 129
Query: 152 GVACKFHHPQ-----PSSLGTAL--PLTGNASLG------SMGS------SVLPSSGLQY 192
G CKF+HP+ SS G+ + P+ + S G +M S S +PS Q
Sbjct: 130 GNTCKFNHPEIFNAVASSRGSPIYPPVHTSGSTGPHSYTGTMASWTYPRGSFIPSPRWQS 189
Query: 193 ----------AGIVPAPGWNTYMGNIGPLS-PTSIA---GSNLIYSSRNQGDLGAGAQ-- 236
G+V P WN+Y G + P+S P S G+ Y + QG+ AG Q
Sbjct: 190 PSNYTPMIVPQGLVQVPSWNSYPGQMVPVSSPESRLQSPGAQQYYGTSRQGEGSAGNQGM 249
Query: 237 ----------MHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 285
+ + +N+ PERPDQP+C YY+ TG CK+GA CKFHHP+ R
Sbjct: 250 QSPYRSSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSQPPPD 309
Query: 286 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG----YPINYGLSLPPLSILD 341
+ P+GLP RPG+ +C YS YGICKFG C+FDHP A Y Y S P + +
Sbjct: 310 CILSPMGLPLRPGEELCKFYSRYGICKFGVNCKFDHPMAAPMGVYAYGYSASASPNAPMA 369
Query: 342 SSLMNHQAISATHS 355
L+ + SA S
Sbjct: 370 RRLLESPSGSAYAS 383
>gi|357126500|ref|XP_003564925.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform 1 [Brachypodium distachyon]
Length = 442
Score = 264 bits (674), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 152/354 (42%), Positives = 199/354 (56%), Gaps = 53/354 (14%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
+E +W+ G Q PYP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 57 DEGMWQ---EMTMSSGAPMQPGPYPERPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAI 113
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +
Sbjct: 114 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRLN 173
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTAL--PLTGNASLGSMG-------- 181
EK C YY++TG CK+G CKF+HP+ SS G+ + L +AS G
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFNHPELFNAVASSRGSPIYPSLHTSASAGPHSYAGTISNW 233
Query: 182 ----SSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIA----GSNLIY 223
S +PS Q YA G+V P WN+Y G + P+S + G+ Y
Sbjct: 234 TYPRGSFIPSPRWQSPSNYAPMIVQQGLVQVPSWNSYPGQMLPVSSSESRLQSPGAQQNY 293
Query: 224 SSRNQGDLGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGAD 270
+ QG+ +G Q + + +N+ PERPDQP+C YY+ TG CK+GA
Sbjct: 294 GTYRQGEASSGNQGMLSPYRPSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAV 353
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
CKFHHP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP A
Sbjct: 354 CKFHHPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGINCKFDHPMA 407
Score = 94.7 bits (234), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 70 FNHPAYAAQGAQYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFN 127
F P YA Q RE + PER QP+C YY+KTG CK+G+ CK+HHP+ R+ P +
Sbjct: 317 FPVPQYALQ----RENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSLPPPDCVLS 372
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 167
+GLP+R E+ C +Y R G CKFG+ CKF HP S +G
Sbjct: 373 PMGLPLRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 412
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
P RPGE C FY R G+C +G NC+F+HP + G
Sbjct: 377 PLRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 412
>gi|218186710|gb|EEC69137.1| hypothetical protein OsI_38063 [Oryza sativa Indica Group]
Length = 395
Score = 263 bits (673), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 145/352 (41%), Positives = 192/352 (54%), Gaps = 66/352 (18%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
EEA+W++ + GG +++PYP R GEPDC +Y RTGLC +G C+FNHP A
Sbjct: 44 EEAMWQMTL----GGGESMESTPYPERIGEPDCSYYMRTGLCRFGMTCKFNHPPNRKLAV 99
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ E P R GQP+C YYLKTGTCK+G+TCK+HHP+++ A V N+LG PMR +
Sbjct: 100 AAARMNGEYPYRVGQPECQYYLKTGTCKFGATCKFHHPREKAALANRVQLNVLGYPMRPN 159
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIV 196
EK C YY+RTG CKF C ++P G+V
Sbjct: 160 EKECAYYLRTGQCKFASTC------------------------YAQVIVPQ------GLV 189
Query: 197 PAPGWNTYMGNIGPLSP-------------------TSIAGSNLIYSSRNQGDLGAGAQM 237
PGWN Y +G SP T G + +Y S G + G
Sbjct: 190 QVPGWNPYAAQMGSSSPDDQQRTPVTTQYYGSRQSETGGMGDHGMYQSYQGGSVPVG--- 246
Query: 238 HILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR 296
+ + +N+ PERPDQP+C++YM TG CK+GA CKFHHPKER+ + + LGLP R
Sbjct: 247 -VYTVQGENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLPLR 305
Query: 297 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQ 348
PG+ +C+ YS YGICKFGP C+FDHP + YG + P D S M++Q
Sbjct: 306 PGEPVCTFYSRYGICKFGPNCKFDHPMG--TLMYGSATSPTG--DVSSMHYQ 353
>gi|255551693|ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 481
Score = 263 bits (671), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 149/353 (42%), Positives = 190/353 (53%), Gaps = 58/353 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AY 75
+EE W+L + + + G YP RP E DC++Y RTG CGYGS CRFNHP A
Sbjct: 28 LEEGDWQLGLGEVEPG--------YPERPEEADCIYYLRTGFCGYGSRCRFNHPRDRGAV 79
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
E PER GQP C YY++TGTCK+G++CKYHHPK G A PVS N G P+R
Sbjct: 80 LGAARAGAAEFPERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSANPVSLNYYGYPLR 139
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT--------------------------- 167
EK C YY++TG CKFGV CKFHHPQP++L
Sbjct: 140 PGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPALQVAPVPAPVPASALYPNVQS 199
Query: 168 -ALPLTGNASLGSMGSSVLPSSGLQ--------YAGIVPAPGWNTYMGNIGPL-SPTSIA 217
++P T L +LP S +Q G+VP P W+ Y G I P+ SP++
Sbjct: 200 PSVPSTQQYGLVVARPPLLPGSYVQGPYGPMLVSPGVVPYPSWSPYPGPISPVASPSTQL 259
Query: 218 GSNLIYSSRNQGDLGA----GAQMHILSASSQ----NLPERPDQPDCRYYMNTGTCKYGA 269
G Q A G + S+S+Q + PERP QP+C+YYM TG CK+G+
Sbjct: 260 GVGSGVYGITQLSPSAPAYTGGYQAMPSSSNQKEQPSFPERPGQPECQYYMKTGDCKFGS 319
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
CK+HHP E IA + P+GLP RPG C++Y+ G CKFGP C+FDHP
Sbjct: 320 SCKYHHPPELIAPKTNVVLSPMGLPLRPGAPHCTHYTQRGQCKFGPACKFDHP 372
>gi|302823236|ref|XP_002993272.1| hypothetical protein SELMODRAFT_45667 [Selaginella moellendorffii]
gi|300138942|gb|EFJ05693.1| hypothetical protein SELMODRAFT_45667 [Selaginella moellendorffii]
Length = 294
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 140/286 (48%), Positives = 176/286 (61%), Gaps = 17/286 (5%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYL 99
PYP RPGE DC++Y RTGLC +G +C+FNHP AA A+ + E PER GQP+C Y+L
Sbjct: 5 PYPERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAIARGKGEYPERPGQPECQYFL 64
Query: 100 KTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFH 158
KTGTCK+GSTCKY HP+D+ G V NI+GLP R EK C YYMRTGSCK+GV CKFH
Sbjct: 65 KTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGEKECAYYMRTGSCKYGVTCKFH 124
Query: 159 HPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAG 218
HPQP+ + + A+ P++ A P + P SPT+
Sbjct: 125 HPQPAVVPSIYAAAAAAAAAGASQPGTPNA----ATGTPQ--------HFQPGSPTTADY 172
Query: 219 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
S + S G L AG + H PERP +C+YY+ TG CKYGA C+FHHP++
Sbjct: 173 SPFVPGSPTMG-LPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASCRFHHPRD 231
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
RI+ SA + + P+GLP R G CS Y +GICKFGPTC+FDHP A
Sbjct: 232 RISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLA 277
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELP 87
+GGG A +P RPG +C +Y +TG C YG++CRF+HP + +A LP
Sbjct: 190 EHKGGGGGDA--FPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISASAPTMLSPMGLP 247
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R G C YY++ G CK+G TCK+ HP
Sbjct: 248 LRTGVQPCSYYIRFGICKFGPTCKFDHP 275
>gi|225436765|ref|XP_002267320.1| PREDICTED: zinc finger CCCH domain-containing protein 32 isoform 1
[Vitis vinifera]
gi|296086618|emb|CBI32253.3| unnamed protein product [Vitis vinifera]
Length = 475
Score = 259 bits (661), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/426 (36%), Positives = 221/426 (51%), Gaps = 65/426 (15%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
++ +EE++WRL G++ YP RPG DC++Y +TG CG+GS CR+NHP
Sbjct: 25 RAVSGLEESMWRL---------GLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYNHPR 75
Query: 75 YAAQGAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNI 128
+ + R E PER G+P C +YLKTGTCK+G++C++HHP RNG G VS NI
Sbjct: 76 DRSSVSTLRSGGGEYPERIGEPACQFYLKTGTCKFGASCRFHHP--RNGGGSMSHVSLNI 133
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSS----- 183
G P+R EK C YY++TG CKFG+ CKFHHPQP+ GT+LP + ++ S
Sbjct: 134 YGYPLRLGEKECSYYLKTGQCKFGITCKFHHPQPA--GTSLPASAPTFYPTVQSPSVPTP 191
Query: 184 ----------------VLPSSGLQ--YA------GIVPAPGWNTYMGNIGPL-----SPT 214
VLP S +Q Y G+VP PGW+ Y + P+ PT
Sbjct: 192 TQYGGTSTSWRVPRPPVLPGSYVQGPYGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPT 251
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTCK 266
AGS + AG + S++ Q PERP Q +C+YY+ TG CK
Sbjct: 252 VGAGSVYGVTQLPSTHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCK 311
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
+G+ C++HHP+E + + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 312 FGSSCRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHPLG-- 369
Query: 327 PINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMK 386
N S S+ D + + S+ ++ S +S P+++ S S + P
Sbjct: 370 --NMRYSPSASSLTDMPVAPYPVGSSLATLAPSFSSSDLRPDFISGSKKDSHSTRMPSSG 427
Query: 387 NSTTKN 392
N+T+ +
Sbjct: 428 NTTSSS 433
>gi|302824291|ref|XP_002993790.1| hypothetical protein SELMODRAFT_45658 [Selaginella moellendorffii]
gi|300138386|gb|EFJ05156.1| hypothetical protein SELMODRAFT_45658 [Selaginella moellendorffii]
Length = 295
Score = 258 bits (660), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 142/290 (48%), Positives = 177/290 (61%), Gaps = 24/290 (8%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYL 99
PYP RPGE DC++Y RTGLC +G +C+FNHP AA A+ + E PER GQP+C Y+L
Sbjct: 5 PYPERPGEQDCVYYMRTGLCAFGMSCKFNHPPNRKLAAAIARGKGEYPERPGQPECQYFL 64
Query: 100 KTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFH 158
KTGTCK+GSTCKY HP+D+ G V NI+GLP R EK C YYMRTGSCK+GV CKFH
Sbjct: 65 KTGTCKFGSTCKYDHPRDKAGIQSRVQLNIVGLPYRPGEKECAYYMRTGSCKYGVTCKFH 124
Query: 159 HPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGW-NTYMG---NIGPLSPT 214
HPQP+ + + A+ + S PG N G + P SPT
Sbjct: 125 HPQPAVVPSIYAAAAAAAAAAGASQ---------------PGTPNAATGTPQHFQPGSPT 169
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
+ S + S G L AG + H PERP +C+YY+ TG CKYGA C+FH
Sbjct: 170 TADYSPFVPGSPTMG-LPAGLREHKGGGGGDAFPERPGVAECQYYLKTGDCKYGASCRFH 228
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
HP++RI+ SA + + P+GLP R G CS Y +GICKFGPTC+FDHP A
Sbjct: 229 HPRDRISASAPTMLSPMGLPLRTGVQPCSYYIRFGICKFGPTCKFDHPLA 278
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELP 87
+GGG A +P RPG +C +Y +TG C YG++CRF+HP + +A LP
Sbjct: 191 EHKGGGGGDA--FPERPGVAECQYYLKTGDCKYGASCRFHHPRDRISASAPTMLSPMGLP 248
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R G C YY++ G CK+G TCK+ HP
Sbjct: 249 LRTGVQPCSYYIRFGICKFGPTCKFDHP 276
>gi|357126502|ref|XP_003564926.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
isoform 2 [Brachypodium distachyon]
Length = 432
Score = 258 bits (658), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 149/350 (42%), Positives = 194/350 (55%), Gaps = 55/350 (15%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
+E +W+ G Q PYP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 57 DEGMWQ---EMTMSSGAPMQPGPYPERPGEPDCTYYLRTGLCRFGISCRFNHPPDRNLAI 113
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R +
Sbjct: 114 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGMVQLNTLGYPLRLN 173
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQ-----PSSLGTAL--PLTGNASLGSMG-------- 181
EK C YY++TG CK+G CKF+HP+ SS G+ + L +AS G
Sbjct: 174 EKECAYYLKTGQCKYGNTCKFNHPELFNAVASSRGSPIYPSLHTSASAGPHSYAGTISNW 233
Query: 182 ----SSVLPSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
S +PS Q YA G+V P WN+Y + G+ Y +
Sbjct: 234 TYPRGSFIPSPRWQSPSNYAPMIVQQGLVQVPSWNSYPSRL------QSPGAQQNYGTYR 287
Query: 228 QGDLGAGAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFH 274
QG+ +G Q + + +N+ PERPDQP+C YY+ TG CK+GA CKFH
Sbjct: 288 QGEASSGNQGMLSPYRPSSFPVPQYALQRENVFPERPDQPECIYYIKTGDCKFGAVCKFH 347
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
HP+ R + P+GLP RPG+ +C YS YGICKFG C+FDHP A
Sbjct: 348 HPRVRSLPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGINCKFDHPMA 397
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 6/100 (6%)
Query: 70 FNHPAYAAQGAQYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFN 127
F P YA Q RE + PER QP+C YY+KTG CK+G+ CK+HHP+ R+ P +
Sbjct: 307 FPVPQYALQ----RENVFPERPDQPECIYYIKTGDCKFGAVCKFHHPRVRSLPPPDCVLS 362
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 167
+GLP+R E+ C +Y R G CKFG+ CKF HP S +G
Sbjct: 363 PMGLPLRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 402
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 23/36 (63%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
P RPGE C FY R G+C +G NC+F+HP + G
Sbjct: 367 PLRPGEELCKFYSRYGICKFGINCKFDHPMASPMGV 402
>gi|30690809|ref|NP_182306.2| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|145331439|ref|NP_001078078.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|62901446|sp|Q84W91.2|C3H32_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 32;
Short=AtC3H32; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 1
gi|134031914|gb|ABO45694.1| At2g47850 [Arabidopsis thaliana]
gi|330255803|gb|AEC10897.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|330255805|gb|AEC10899.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
Length = 468
Score = 256 bits (655), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 139/346 (40%), Positives = 193/346 (55%), Gaps = 55/346 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
++E++WRL + + YP RPG PDC +Y RTG+CGYG+ CR+NHP A
Sbjct: 28 LQESMWRLGLGSDS----------YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASV 77
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQ 135
+ + PER G+P C +YLKTGTCK+G++CK+HHPK+ G+ V NI G P+R+
Sbjct: 78 EATVRATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVRE 137
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP--------------------LTGNA 175
+ C YY++TG CKFG+ CKFHHPQP+ GT +P G +
Sbjct: 138 GDNECSYYLKTGQCKFGITCKFHHPQPA--GTTVPPPPASAPQFYPSVQSLMPDQYGGPS 195
Query: 176 SLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSP--------TSIAG 218
S + ++LP S +Q A G+VP PGW+ Y + P LSP TS+ G
Sbjct: 196 SSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYG 255
Query: 219 SNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+ S+ G + + + Q PERP +P+C+YY+ TG CK+G CKFHHP
Sbjct: 256 VTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP 315
Query: 277 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 316 RDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 361
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 50/93 (53%), Gaps = 1/93 (1%)
Query: 230 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
D G M L S + PERP PDC YYM TG C YG C+++HP++R A A+
Sbjct: 25 DTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR-ASVEATVRA 83
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P R G+ C Y G CKFG +C+F HP
Sbjct: 84 TGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
>gi|297824887|ref|XP_002880326.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297326165|gb|EFH56585.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 471
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 139/345 (40%), Positives = 193/345 (55%), Gaps = 52/345 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + YP RPG PDC +Y RTG+CGYG+ CR+NHP A
Sbjct: 30 LEESMWRLGLGCES----------YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASV 79
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQ 135
+ + PER G+P C +YLKTGTCK+G++CK+HHPK+ G+ V NI G P+R+
Sbjct: 80 EAAVRATGQYPERLGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNIYGYPVRE 139
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPS-----------------SLGTALP--LTGNAS 176
+ C YY++TG CKFG+ CKFHHPQP+ S+ + +P G +S
Sbjct: 140 GDNECSYYLKTGQCKFGITCKFHHPQPAGTTVPPPPPASAPQFYPSVQSLMPDQYGGPSS 199
Query: 177 LGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSP--------TSIAGS 219
+ ++LP S +Q A G+VP PGW+ Y + P LSP TS+ G
Sbjct: 200 SLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQHAVGATSLYGV 259
Query: 220 NLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
+ S+ G + + + Q PERP +P+C+YY+ TG CK+G CKFHHP+
Sbjct: 260 TQLSSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPR 319
Query: 278 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 320 DRVPPRANCILSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 364
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 232 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 291
G M L ++ PERP PDC YYM TG C YG C+++HP++R + AA
Sbjct: 29 GLEESMWRLGLGCESYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEAAVR-ATG 87
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P R G+ C Y G CKFG +C+F HP
Sbjct: 88 QYPERLGEPPCQFYLKTGTCKFGASCKFHHP 118
>gi|255559296|ref|XP_002520668.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223540053|gb|EEF41630.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 478
Score = 251 bits (641), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 148/354 (41%), Positives = 197/354 (55%), Gaps = 60/354 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + N GGG + YP RPG PDC++Y RTG CGYG+ CR+NHP A
Sbjct: 30 LEESMWRLGL--NNSGGGES----YPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAV 83
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQ 135
+ E PER G+P C +YLKTGTCK+G++CK+HHPK G+ V N G P+R
Sbjct: 84 EAAVRATGEYPERIGEPSCEFYLKTGTCKFGASCKFHHPKHGGGSLSHVPLNTHGYPLRP 143
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG---------------------N 174
E C YY++TG CKFG+ CKFHHPQP+ G++LP + +
Sbjct: 144 GENECSYYLKTGQCKFGITCKFHHPQPA--GSSLPESAPQFYQPVQSPSIPIPDQYGGAS 201
Query: 175 ASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSP--------TSIA 217
ASL + +LP S +Q A G+VP PGW+ Y + P LSP TS+
Sbjct: 202 ASL-RVRPPLLPGSYVQGAYGPVLFSPGVVPIPGWSPYSAPVSPVLSPSAQPAVGATSLY 260
Query: 218 GSNLIYSSR-------NQGDLGAGAQMHILSAS--SQNLPERPDQPDCRYYMNTGTCKYG 268
G + SS A A LS + Q PERP +P+C+YY+ TG CK+G
Sbjct: 261 GVTQLSSSTPALAGPYPSPSSAAAAAAAPLSGTQKEQTFPERPGEPECQYYLRTGDCKFG 320
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+ C++HHP++R+ + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 321 SSCRYHHPRDRVVPRTNCVLSPLGLPLRPGAQHCTFYLRNGHCKFGSTCKFDHP 374
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 57/101 (56%), Gaps = 4/101 (3%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQ 92
G + +P RPGEP+C +Y RTG C +GS+CR++HP LP R G
Sbjct: 292 GTQKEQTFPERPGEPECQYYLRTGDCKFGSSCRYHHPRDRVVPRTNCVLSPLGLPLRPGA 351
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
C +YL+ G CK+GSTCK+ HP + P + +++ +P+
Sbjct: 352 QHCTFYLRNGHCKFGSTCKFDHPMETMRYSPSASSLIDMPV 392
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 300
S ++ PERP PDC YYM TG C YG C+++HP+ R A AA P R G+
Sbjct: 42 SGGGESYPERPGVPDCVYYMRTGFCGYGNRCRYNHPRNRAAVEAAVRAT-GEYPERIGEP 100
Query: 301 ICSNYSMYGICKFGPTCRFDHPYAG 325
C Y G CKFG +C+F HP G
Sbjct: 101 SCEFYLKTGTCKFGASCKFHHPKHG 125
>gi|30685903|ref|NP_851041.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|62901381|sp|Q8L7N8.2|C3H57_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 57;
Short=AtC3H57; AltName: Full=Zinc finger type
domain-containing protein ZFN3
gi|332004925|gb|AED92308.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 375
Score = 250 bits (638), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 149/380 (39%), Positives = 202/380 (53%), Gaps = 43/380 (11%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+ A+W++ + + G YP R GEPDC +Y RTGLC +GS CRFNHP
Sbjct: 19 QNAMWQMNLGSDDTMGVDGS---YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVI 75
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQD 136
A+ + E PER GQP+C +YLKTGTCK+G TCK+HHP+++ G G VS N+L P+R +
Sbjct: 76 ATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPN 135
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIV 196
E C Y++R G CKFG CKF+HPQ S N + GS V S LQ
Sbjct: 136 EDDCSYFLRIGQCKFGGTCKFNHPQTQST--------NLMVSVRGSPVY--SALQSLTGQ 185
Query: 197 PAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL-------GAGAQMHILSASSQNL-P 248
P+ W+ P +G ++S +QG L G + + +N+ P
Sbjct: 186 PSYSWSRTSFVANPPRLQDPSG----FASGSQGGLFSSGFHSGNSVPLGFYALPRENVFP 241
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
ERP QP+C++YM TG CK+G CKFHHP++R + +GLP RPG+ +C YS Y
Sbjct: 242 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRY 301
Query: 309 GICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS-------ATHSIETSPD 361
GICKFGP+C+FDHP + N + P S SSL AI+ + S+E P
Sbjct: 302 GICKFGPSCKFDHPMRVFTYNNNTASPSPS---SSLHQETAITTELRNLLVSSSVEAKP- 357
Query: 362 ASSKIPNWVQNSDA-VSVQH 380
+ +P D V QH
Sbjct: 358 --TSLPETTSAKDTIVDAQH 375
>gi|42573387|ref|NP_974790.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|21536865|gb|AAM61197.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|332004924|gb|AED92307.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 354
Score = 247 bits (631), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 148/377 (39%), Positives = 200/377 (53%), Gaps = 43/377 (11%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W++ + + G YP R GEPDC +Y RTGLC +GS CRFNHP A
Sbjct: 1 MWQMNLGSDDTMGVDGS---YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVIATA 57
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKS 139
+ + E PER GQP+C +YLKTGTCK+G TCK+HHP+++ G G VS N+L P+R +E
Sbjct: 58 RIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDD 117
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAP 199
C Y++R G CKFG CKF+HPQ S N + GS V S LQ P+
Sbjct: 118 CSYFLRIGQCKFGGTCKFNHPQTQST--------NLMVSVRGSPVY--SALQSLTGQPSY 167
Query: 200 GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL-------GAGAQMHILSASSQNL-PERP 251
W+ P +G ++S +QG L G + + +N+ PERP
Sbjct: 168 SWSRTSFVANPPRLQDPSG----FASGSQGGLFSSGFHSGNSVPLGFYALPRENVFPERP 223
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 311
QP+C++YM TG CK+G CKFHHP++R + +GLP RPG+ +C YS YGIC
Sbjct: 224 GQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSSVGLPLRPGEPLCVFYSRYGIC 283
Query: 312 KFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS-------ATHSIETSPDASS 364
KFGP+C+FDHP + N + P S SSL AI+ + S+E P +
Sbjct: 284 KFGPSCKFDHPMRVFTYNNNTASPSPS---SSLHQETAITTELRNLLVSSSVEAKP---T 337
Query: 365 KIPNWVQNSDA-VSVQH 380
+P D V QH
Sbjct: 338 SLPETTSAKDTIVDAQH 354
>gi|225432344|ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera]
gi|297736890|emb|CBI26091.3| unnamed protein product [Vitis vinifera]
Length = 478
Score = 247 bits (630), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 191/383 (49%), Gaps = 86/383 (22%)
Query: 3 DNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLC 62
D Q + VA +EE +W+L + E YP RP E DC++Y +TG C
Sbjct: 16 DPSQEWTGPVAE---TGLEEPLWQLGLGGGGEA--------YPERPDEADCIYYLKTGFC 64
Query: 63 GYGSNCRFNHPA-YAAQGAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
GYG+ CRFNHP G R E PER GQP C +Y+KTGTCK+G++CKYHHP+
Sbjct: 65 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQG 124
Query: 119 NG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL------------ 165
G PV+ N G P+R EK C YY++TG CKFG CKFHHPQP S+
Sbjct: 125 GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPA 184
Query: 166 ------------GTALPLTGNASLGSMGSSVLPSS--------GLQYAGIVPAPGWNTYM 205
++P + L +LPSS L G+VP PGW+ Y
Sbjct: 185 PVPAHTLYPTVQSPSVPSSQQYGLVVARPPLLPSSYFHGPYSPVLIPPGMVPFPGWSHYP 244
Query: 206 GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS--------------------- 244
+ P++ S Q +G+G QM+ L+ S
Sbjct: 245 APVSPVA-----------SPSTQPTVGSG-QMYGLTPLSPSAPAYTGPYTPLPSSVGPSS 292
Query: 245 -----QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 299
Q PERP QP+C+YYM TG CK+G+ CK+HHP E + P+GLP RPG
Sbjct: 293 SSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGA 352
Query: 300 AICSNYSMYGICKFGPTCRFDHP 322
C++Y+ GICKFGPTC+FDHP
Sbjct: 353 PQCTHYAQRGICKFGPTCKFDHP 375
>gi|147853205|emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 147/383 (38%), Positives = 192/383 (50%), Gaps = 86/383 (22%)
Query: 3 DNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLC 62
D Q + VA +EE +W L + E YP RP E DC++Y +TG C
Sbjct: 56 DPSQEWTGPVAE---TGLEEPLWXLGLGGGGEA--------YPERPDEADCIYYLKTGFC 104
Query: 63 GYGSNCRFNHPA-YAAQGAQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
GYG+ CRFNHP G R E PER GQP C +Y+KTGTCK+G++CKYHHP+
Sbjct: 105 GYGARCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQG 164
Query: 119 NG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL------------ 165
G PV+ N G P+R EK C YY++TG CKFG CKFHHPQP S+
Sbjct: 165 GGTVSPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPA 224
Query: 166 ------------GTALPLTGNASLGSMGSSVLPSSGLQ--YA------GIVPAPGWNTYM 205
++P + L +LPSS + Y+ G+VP PGW+ Y
Sbjct: 225 PVPAHTLYPXVQSPSVPSSQQYGLVVARPPLLPSSYIHGPYSPVLIPPGMVPFPGWSHYP 284
Query: 206 GNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS--------------------- 244
+ P++ S Q +G+G QM+ L+ S
Sbjct: 285 APVSPVA-----------SPSTQPTVGSG-QMYGLTPLSPSAPAYTGPYTPLPSSVGPSS 332
Query: 245 -----QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 299
Q PERP QP+C+YYM TG CK+G+ CK+HHP E + P+GLP RPG
Sbjct: 333 SSQKEQIFPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGA 392
Query: 300 AICSNYSMYGICKFGPTCRFDHP 322
C++Y+ GICKFGPTC+FDHP
Sbjct: 393 PQCTHYAQRGICKFGPTCKFDHP 415
>gi|295913614|gb|ADG58052.1| transcription factor [Lycoris longituba]
Length = 303
Score = 246 bits (627), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 125/274 (45%), Positives = 173/274 (63%), Gaps = 40/274 (14%)
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
KTGTCK+G+TCKYHHP++R A P N+LGLPMRQ+EKSCPYYMRTGSCKFG+ACKF+H
Sbjct: 4 KTGTCKFGATCKYHHPRERYDAPPAPLNMLGLPMRQEEKSCPYYMRTGSCKFGIACKFNH 63
Query: 160 PQPSSLGT--------------ALPLTGNASLGSMGSSVLPSSGLQ-----YAGIVPAP- 199
PQP++LG+ ++PL G S + +P+ +Q I+P P
Sbjct: 64 PQPATLGSSAYGFTGSSVASQLSMPLMGGLSAWPLARPYIPNPRMQGLSTYVPVILPQPS 123
Query: 200 --------GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 251
GW+TY G++ L T + G I +++ H S+++ NLPERP
Sbjct: 124 QGAMPMQQGWSTYTGSVSELPSTDVHGHAQIPNTK--------LHAHSGSSTTINLPERP 175
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 311
DQP+C+YYM TG+CKYG CK+HHPKER +S + +GPLGLP RPG A+C+ Y+ YG C
Sbjct: 176 DQPECQYYMKTGSCKYGTTCKYHHPKERYMESPFT-LGPLGLPLRPGHAVCTFYTAYGSC 234
Query: 312 KFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM 345
++G +C++DHP G+ Y ++P ++ D SL
Sbjct: 235 RYGSSCKYDHPLMGF---YNYAVPAIAAPDPSLF 265
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 61/100 (61%)
Query: 71 NHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
N +A G+ LPER QP+C YY+KTG+CKYG+TCKYHHPK+R P + LG
Sbjct: 156 NTKLHAHSGSSTTINLPERPDQPECQYYMKTGSCKYGTTCKYHHPKERYMESPFTLGPLG 215
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP 170
LP+R C +Y GSC++G +CK+ HP A+P
Sbjct: 216 LPLRPGHAVCTFYTAYGSCRYGSSCKYDHPLMGFYNYAVP 255
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 45/79 (56%), Gaps = 13/79 (16%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--------LPERNGQPDCG 96
P RP +P+C +Y +TG C YG+ C+++HP +Y E LP R G C
Sbjct: 172 PERPDQPECQYYMKTGSCKYGTTCKYHHPK-----ERYMESPFTLGPLGLPLRPGHAVCT 226
Query: 97 YYLKTGTCKYGSTCKYHHP 115
+Y G+C+YGS+CKY HP
Sbjct: 227 FYTAYGSCRYGSSCKYDHP 245
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 71/183 (38%), Gaps = 56/183 (30%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP--------AYAAQGAQYREEL---------- 86
P R E C +Y RTG C +G C+FNHP AY G+ +L
Sbjct: 36 PMRQEEKSCPYYMRTGSCKFGIACKFNHPQPATLGSSAYGFTGSSVASQLSMPLMGGLSA 95
Query: 87 ----------PERNG----------QPDCGYY-LKTGTCKYGSTCKYHHPKDRNGAGPV- 124
P G QP G ++ G Y + D +G +
Sbjct: 96 WPLARPYIPNPRMQGLSTYVPVILPQPSQGAMPMQQGWSTYTGSVSELPSTDVHGHAQIP 155
Query: 125 ---------SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ------PSSLG-TA 168
S + LP R D+ C YYM+TGSCK+G CK+HHP+ P +LG
Sbjct: 156 NTKLHAHSGSSTTINLPERPDQPECQYYMKTGSCKYGTTCKYHHPKERYMESPFTLGPLG 215
Query: 169 LPL 171
LPL
Sbjct: 216 LPL 218
>gi|3738297|gb|AAC63639.1| unknown protein [Arabidopsis thaliana]
Length = 553
Score = 245 bits (626), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 133/333 (39%), Positives = 179/333 (53%), Gaps = 56/333 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP RPG PDC +Y RTG+CGYG+ CR+NHP A + + PER G+P C +YLK
Sbjct: 116 YPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFYLK 175
Query: 101 TGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
TGTCK+G++CK+HHPK+ G+ V NI G P+R+ + C YY++TG CKFG+ CKFHH
Sbjct: 176 TGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHH 235
Query: 160 PQPSSLGTALP--------------------LTGNASLGSMGSSVLPSSGLQYA------ 193
PQP+ GT +P G +S + ++LP S +Q A
Sbjct: 236 PQPA--GTTVPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLL 293
Query: 194 --GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS------- 244
G+VP PGW+ Y L A + S Q +GA + + +S
Sbjct: 294 TPGVVPIPGWSPYSSLTVSLLLLLQAPVSPALSPGAQHAVGATSLYGVTQLTSTTPSLPG 353
Query: 245 ---------------QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
Q PERP +P+C+YY+ TG CK+G CKFHHP++R+ A +
Sbjct: 354 VYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLS 413
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 414 PIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 446
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-LPSRPGQAIC 302
S + PERP PDC YYM TG C YG C+++HP++R S + + G P R G+ C
Sbjct: 113 SDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVRATGQYPERFGEPPC 170
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y G CKFG +C+F HP
Sbjct: 171 QFYLKTGTCKFGASCKFHHP 190
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 4/84 (4%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNG 91
G + + +P RPGEP+C +Y +TG C +G++C+F+HP A LP R G
Sbjct: 363 GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPG 422
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y++ G CK+GSTCK+ HP
Sbjct: 423 VQRCTFYVQNGFCKFGSTCKFDHP 446
>gi|356535424|ref|XP_003536245.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 494
Score = 244 bits (623), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/352 (41%), Positives = 201/352 (57%), Gaps = 64/352 (18%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG 79
+EE++W L + GGG + YP RPG P+C++Y RTG+CGYGS CR+NHP A
Sbjct: 30 LEESMWHLTL-----GGGES----YPERPGVPNCVYYMRTGVCGYGSRCRYNHPRDRAAV 80
Query: 80 AQYRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPM 133
A + PER G+P C YYLKTGTCK+G++CK+HHPK NG G ++ NI G P+
Sbjct: 81 AAAVRVTGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLTQAPLNIYGYPL 138
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT--------------------- 172
R EK C YY++TG CKFG++CKFHHPQP+ GT+LP +
Sbjct: 139 RPGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPTSAPQFYQQVQSPTVPLPEQYGG 196
Query: 173 GNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSP---TSIAGSN 220
+ SL VLP S +Q A G+V PGW+ Y + P LSP ++ ++
Sbjct: 197 ASTSLRVARPPVLPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPVSPVLSPGAQPTVGATS 256
Query: 221 LIYSSRNQGDLGAGAQMHI-LSASS---------QNLPERPDQPDCRYYMNTGTCKYGAD 270
L ++ A A+ + LS+++ Q PERP +P+C+YY+ TG CK+G
Sbjct: 257 LYGVTQLSSPTSAFARPYTPLSSTTGPSGSNLKDQFFPERPGEPECQYYLRTGDCKFGLA 316
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
C++HHP++ I A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 317 CRYHHPRDHIV--ARPLLSPVGLPLRPGVQPCAFYLQNGHCKFGSTCKFDHP 366
>gi|79516213|ref|NP_197356.2| zinc finger CCCH domain-containing protein 58 [Arabidopsis
thaliana]
gi|62901486|sp|Q6NPN3.1|C3H58_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 58;
Short=AtC3H58; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 3
gi|38603838|gb|AAR24664.1| At5g18550 [Arabidopsis thaliana]
gi|110740171|dbj|BAF01984.1| zinc finger like protein [Arabidopsis thaliana]
gi|332005195|gb|AED92578.1| zinc finger CCCH domain-containing protein 58 [Arabidopsis
thaliana]
Length = 465
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 140/357 (39%), Positives = 189/357 (52%), Gaps = 56/357 (15%)
Query: 13 ANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH 72
A + IE ++WRL + +P RP EPDC++Y RTG+CGYGS CRFNH
Sbjct: 22 AQGTETGIEASMWRLGLRGGG-----GGGETFPERPDEPDCIYYLRTGVCGYGSRCRFNH 76
Query: 73 PAYAA--QGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVS 125
P A G E E PER GQP C ++++TGTCK+G++CKYHHP+ G PVS
Sbjct: 77 PRNRAPVLGGLRTEAGEFPERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVS 136
Query: 126 FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVL 185
N +G P+R EK C Y+MRTG CKFG C++HHP P G P S G ++
Sbjct: 137 LNYMGFPLRPGEKECSYFMRTGQCKFGSTCRYHHPVPP--GVQAPSQQQQQQLSAGPTMY 194
Query: 186 PS-------SGLQYA---------------------------GIVPAPGWNTYMGNIGPL 211
PS S QY G+VP GWN Y ++ +
Sbjct: 195 PSLQSQTVPSSQQYGVVLARPQLLPGSYVQSPYGYGQMVLPPGMVPYSGWNPYQASVSAM 254
Query: 212 -SPTS--IAGSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 264
SP + G++ +Y S + +G +S Q P+RP+QP+C+Y+M TG
Sbjct: 255 PSPGTQPSMGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGD 314
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
CK+G C+FHHP E A AS + +GLP RPG C++++ +GICKFGP C+FDH
Sbjct: 315 CKFGTSCRFHHPME-AASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDH 370
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 65/125 (52%), Gaps = 27/125 (21%)
Query: 73 PAY----AAQGAQYREE-LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN 127
PAY ++ G +E+ P+R QP+C Y+++TG CK+G++C++HHP + + +
Sbjct: 279 PAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHHPMEAASPEASTLS 338
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH----------------------PQPSSL 165
+GLP+R C ++ + G CKFG ACKF H P PSSL
Sbjct: 339 HIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPSPSSLTDMPVAPYPSSL 398
Query: 166 GTALP 170
GT P
Sbjct: 399 GTLAP 403
>gi|297807679|ref|XP_002871723.1| hypothetical protein ARALYDRAFT_488510 [Arabidopsis lyrata subsp.
lyrata]
gi|297317560|gb|EFH47982.1| hypothetical protein ARALYDRAFT_488510 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 143/356 (40%), Positives = 196/356 (55%), Gaps = 37/356 (10%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP R GEPDC +Y RTGLC +G CRFNHP A+ + E PER GQP+C +YLK
Sbjct: 7 YPERHGEPDCAYYIRTGLCRFGFTCRFNHPHDRKLVIATARIKGEYPERIGQPECEFYLK 66
Query: 101 TGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
TGTCK+G TCK+HHP+++ G G VS N+LG P+R +E C Y++RTG CKFG CKF+H
Sbjct: 67 TGTCKFGVTCKFHHPRNKAGNDGRVSVNVLGYPLRPNEDDCSYFLRTGHCKFGGTCKFNH 126
Query: 160 PQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ------YAGIVPAPGWNTYMGNIGPLSP 213
PQ S + L G+ ++ P+ G Q + + P W P S
Sbjct: 127 PQTQSTNLMVSLRGSPVYSALQP---PTDGQQSYSWPRTSFVANPPRWQ------DPSSF 177
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCK 272
+S + L S + G+ + + +N+ PERP QP+C++YM TG CK+G CK
Sbjct: 178 SSGSQGGLFSSGFHSGN---SVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCK 234
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGL 332
FHHP++R + + +GLP R G+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 235 FHHPRDRQTPAPDCALSSVGLPLRQGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNND 294
Query: 333 SLPPLSILDSSLMNHQAIS-------ATHSIETSPDASSKIPNWVQNSDA-VSVQH 380
+ P S SSL AI+ + S+E +P + +P D V QH
Sbjct: 295 ASPSPS---SSLHQETAITTQLRNLLVSSSVEATP---TTLPETTSAKDTIVDAQH 344
>gi|224107375|ref|XP_002314462.1| predicted protein [Populus trichocarpa]
gi|222863502|gb|EEF00633.1| predicted protein [Populus trichocarpa]
Length = 456
Score = 244 bits (622), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 142/354 (40%), Positives = 192/354 (54%), Gaps = 59/354 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAA 77
+EE +W+L+I + + S YP RP E DC++Y RTG CGYG+ CR+NHP A
Sbjct: 28 LEEGVWQLEIGETE--------SEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAV 79
Query: 78 QGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMR 134
GA E PER GQP C YY++TGTCK+G++CKY+HPK + PVS N G P+R
Sbjct: 80 LGAARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPLR 139
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG----------------TALPLTGNASL- 177
E+ C YY++TG CKFG CKFHHPQP+++ T P + S+
Sbjct: 140 PGERECTYYIKTGQCKFGATCKFHHPQPANMQIPAQSLAPQVASVPAHTLYPTMQSPSVP 199
Query: 178 -----GSMGSS--VLPSSGLQ--------YAGIVPAPGWNTYMGNIGPL-SPTS--IAGS 219
G M + +LP S +Q +VP P W+ Y + P+ SP + GS
Sbjct: 200 SSQQYGVMVARPPLLPGSYVQGPYGPVLLSPSLVPYPSWSPYPAPVSPVASPNAQPAVGS 259
Query: 220 NLIYSSRN---QGDLGAGAQMHILSA-----SSQN---LPERPDQPDCRYYMNTGTCKYG 268
+Y GA I +A SSQ PERP QP+C+YYM TG CK+
Sbjct: 260 GSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPERPGQPECQYYMKTGDCKFE 319
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+ C++HHP E + + P+GLP RPG C++Y+ +G CKFGP C+FDHP
Sbjct: 320 SSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYTQHGQCKFGPACKFDHP 373
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 63/115 (54%), Gaps = 5/115 (4%)
Query: 225 SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 284
S + L G + + PERP++ DC YY+ TG C YGA C+++HP++R A
Sbjct: 22 SGQETGLEEGVWQLEIGETESEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLG 81
Query: 285 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
A+ G P R GQ +C Y G CKFG +C+++HP G G S+ P+S+
Sbjct: 82 AARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQG-----GSSVRPVSL 131
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 50/94 (53%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYL 99
+P RPG+P+C +Y +TG C + S+CR++HP LP R G P C +Y
Sbjct: 298 FPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYT 357
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ HP P + ++ +P+
Sbjct: 358 QHGQCKFGPACKFDHPMGTLSYSPSASSLADMPV 391
>gi|356563888|ref|XP_003550189.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 484
Score = 243 bits (621), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/373 (38%), Positives = 186/373 (49%), Gaps = 78/373 (20%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
+A + +EE+ W+L G+A A YP RP E DC++Y RTG CGYG+ CRFN
Sbjct: 21 LAAGADAGLEESSWQL---------GLAGAESYPMRPDEADCIYYLRTGFCGYGTRCRFN 71
Query: 72 HP----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSF 126
HP A A+ E PER GQP C Y+++TG CK+G +CKYHHP+ G A PV
Sbjct: 72 HPRDRAAVIGAAARTGGEFPERVGQPVCQYFMRTGLCKFGVSCKYHHPRQAAGTATPVPL 131
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT------------------- 167
N G P+R EK C YY++TG CKFG CKFHHPQP+ +
Sbjct: 132 NYYGYPLRVAEKECSYYVKTGQCKFGATCKFHHPQPAGVQALAPSPVPPVSPLPVPVPSP 191
Query: 168 ---ALPLTGNASLGSMGSSV-----LPSSGLQ--------YAGIVPAPGWNTYMGN---- 207
+ + S G V LP S +Q +VP GW+ Y
Sbjct: 192 MYPTVQIPSGPSQQQYGVLVARPPMLPGSVVQGPYGPMVVSPAMVPFSGWSPYQAPATNP 251
Query: 208 IGPLSPTSIAGSNLIY------------------SSRNQGDLGAGAQMHILSASSQNLPE 249
+ P S TS AGS Y S + G GA + H PE
Sbjct: 252 VLPSSNTSNAGSTQFYGISQLPSSPATFTGPYQPSGSSIGPSGASQKEH-------PFPE 304
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
RPDQP+C +YM TG CK+G C++HHP ++ A A + P+GLP RPG C++Y+ G
Sbjct: 305 RPDQPECHHYMKTGECKFGLSCRYHHPPDKSAPKATVTLSPVGLPLRPGAPPCTHYTQRG 364
Query: 310 ICKFGPTCRFDHP 322
+CKFG C+FDHP
Sbjct: 365 VCKFGSACKFDHP 377
>gi|224123154|ref|XP_002330352.1| predicted protein [Populus trichocarpa]
gi|222871556|gb|EEF08687.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 243 bits (620), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 143/359 (39%), Positives = 191/359 (53%), Gaps = 67/359 (18%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----- 73
+EE +W+L + + + S YP R E DC++Y RTG CGYG+ CR+NHP
Sbjct: 27 GLEEGVWQLGLGETE--------SEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNA 78
Query: 74 ---AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNIL 129
A A GA+Y PER GQP C YY++TGTCK+G++CKYHHPK G A PVS N
Sbjct: 79 VLGAARAGGAEY----PERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYY 134
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT--------ALPLTG-------- 173
G P+R E+ C YY++TG CKFG CKFHHPQP ++ P+ G
Sbjct: 135 GYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPVPGPTLYPSVQ 194
Query: 174 ------NASLGSMGSS--VLPSSGLQ--------YAGIVPAPGWNTYMGNIGPL-SPTS- 215
+ G M + +LP S +Q +VP P WN Y + P+ SP +
Sbjct: 195 SPSVPSSQQYGVMVARPPLLPGSYVQGPYGPVLLSPSVVPYPSWNPYPAPVSPVASPNTQ 254
Query: 216 -IAGSNLIYSSRN---QGDLGAGAQMHIL-----SASSQN---LPERPDQPDCRYYMNTG 263
GS +Y GA I S+S+Q PERP QP+C+YY+ TG
Sbjct: 255 PAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPERPGQPECQYYIKTG 314
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
CK+ + C++HHP E + + + P+GLP RPG CS+Y+ G CKFGP C+FDHP
Sbjct: 315 DCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPACKFDHP 373
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 54/91 (59%)
Query: 235 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 294
A + A PER QP C+YYM TGTCK+GA CK+HHPK+ ++ ++ G P
Sbjct: 78 AVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYP 137
Query: 295 SRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
RPG+ C+ Y G CKFG TC+F HP G
Sbjct: 138 LRPGERECTYYIKTGQCKFGATCKFHHPQPG 168
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C +Y +TG C + S+CR++HP + LP R G P C +Y
Sbjct: 298 FPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYT 357
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ HP P + ++ +P+
Sbjct: 358 QRGQCKFGPACKFDHPMGTLSYSPSASSLADMPV 391
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
LP RP P C +Y G CK+G CKF HP ++ S +++
Sbjct: 343 GLPLRPGAPTCSHYTQRGQCKFGPACKFDHPMGTLSYSPSAS 384
>gi|301133584|gb|ADK63414.1| CCCH type zinc finger protein [Brassica rapa]
Length = 455
Score = 241 bits (615), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 191/352 (54%), Gaps = 59/352 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----- 73
+E ++WRL + GGG A YP R EPDC++Y RTG+CGYGS CRFNHP
Sbjct: 28 RVEASMWRLGL----TGGGEA----YPERSNEPDCIYYLRTGVCGYGSRCRFNHPRDRGA 79
Query: 74 ------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSF 126
G LPER GQP C ++++TGTCKYG +CKYHHP+ G+ PVS
Sbjct: 80 VVGGVRGGGGGGGGGDGALPERMGQPVCQHFMRTGTCKYGGSCKYHHPRQGGGSVAPVSL 139
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH----------------------PQPSS 164
+ LG P+R EK C YYMRTG CKFG+ C+F+H P PS+
Sbjct: 140 SYLGYPLRSGEKECSYYMRTGQCKFGLTCRFNHPVPQPQQQQPQTQNIYPTLQSQPMPSA 199
Query: 165 LGTALPLTGNASL-GSMGSS------VLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIA 217
L LT + L GS S VLP + Y P P T M + G + SI
Sbjct: 200 QQYGLVLTRPSLLPGSYLPSPYGPPMVLPPGMVTYPNWNPYPASLTAMPSPGTGTQQSI- 258
Query: 218 GSNLIYS--------SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 269
G++ +Y + G +G + ++ + P+RPDQP+C+Y+M TG CK+GA
Sbjct: 259 GTSSVYGMAPLSPSGTAYTGTYQSGGP-SLTTSKEEPFPQRPDQPECQYFMRTGDCKFGA 317
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C++HHP + + + + P+GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 318 SCRYHHPLDAVQTNTGVLLSPIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 369
>gi|356500268|ref|XP_003518955.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 471
Score = 241 bits (614), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 156/419 (37%), Positives = 219/419 (52%), Gaps = 68/419 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++W L + GGG + YP R G P+C++Y RTG+CGYG CR+NHP A
Sbjct: 30 LEESMWHLTL-----GGGES----YPERSGVPNCVYYMRTGVCGYGGRCRYNHPRDRAAV 80
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPM 133
A + + PER G+P C YYLKTGTCK+G++CK+HHPK NG G +S N+ G P+
Sbjct: 81 AAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLSQAPLNVYGYPL 138
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT--------------------- 172
R EK C YY++TG CKFG++CKFHHPQP+ GT+LP +
Sbjct: 139 RPGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPASAPQFYQQVQSPTVPLPEQYGG 196
Query: 173 GNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGPL-SP--------TS 215
++SL +LP S +Q A G+V PGW+ Y + P+ SP TS
Sbjct: 197 ASSSLRVARPPILPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPVSPVPSPGAQPAVGATS 256
Query: 216 IAGSNLIYS-----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
+ G + S +R L + + Q PERP +P+C+YY+ TG CK+G
Sbjct: 257 LYGVTQLSSPTSAFARPYTPLPSTTDPSRSNPKEQLYPERPGEPECQYYLRTGDCKFGLA 316
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 330
C++HHP++ I A + P+GLP RPG C+ Y G CKFG TC+FDHP + Y
Sbjct: 317 CRYHHPRDHIV--ARPLLSPVGLPLRPGLQPCAFYLQNGHCKFGSTCKFDHPLGS--MRY 372
Query: 331 GLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNST 389
S S++D + + S + S +S P + S S + P NS+
Sbjct: 373 SPSA--SSLIDVPVTPYPVGSLLSQLAPSTTSSDLRPELMSGSKKESFSARIPSSGNSS 429
>gi|359491687|ref|XP_003634306.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 2
[Vitis vinifera]
Length = 481
Score = 241 bits (614), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 140/350 (40%), Positives = 188/350 (53%), Gaps = 38/350 (10%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
+++D+ EE L+ + A+ YP RP DC FY RTG C +GSNC+FNHP
Sbjct: 98 KASDDEEEQCENLEDESAAKDDKSARFQ-YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPI 156
Query: 74 ------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SF 126
A + +EE PER GQ +C YYL+TG CK+G C+Y+H K + A PV
Sbjct: 157 RRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLEL 216
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT-----------ALPLTGNA 175
N LGLP+R EK CPYYMRTGSCK+G C+F+HP P++ G ++PL G A
Sbjct: 217 NFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQG-A 275
Query: 176 SLGSMGSSVLPSSGLQYAGIVPA------------PGWNTYMGNIGPLSPTSIAGSNLIY 223
S +M S P + + A VP P WN Y + L + +
Sbjct: 276 SQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQVFMLLLKRSMHPPPAFVI 335
Query: 224 SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 283
++ G + ++ PERP QP+C Y++ TG CK+ A CK+HHPK RI +S
Sbjct: 336 NNTATDANVYGHHQQQQQSLIEDFPERPGQPECSYFLKTGDCKFRAACKYHHPKNRIPKS 395
Query: 284 AASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
+ GLP RP Q IC++Y+ YGICKFGP C+FDH P+NYG S
Sbjct: 396 PPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDH-----PVNYGNS 440
>gi|297807877|ref|XP_002871822.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
gi|297317659|gb|EFH48081.1| hypothetical protein ARALYDRAFT_488738 [Arabidopsis lyrata subsp.
lyrata]
Length = 474
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 131/324 (40%), Positives = 181/324 (55%), Gaps = 47/324 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA--QGAQYRE--ELPERNGQPDCGYYL 99
+P RP EPDC+++ RTG+CGYGS CRFNHP A G+ E E PER GQP C +++
Sbjct: 48 FPERPDEPDCIYFLRTGVCGYGSRCRFNHPRNRAPVLGSLRTEAGEFPERMGQPVCQHFM 107
Query: 100 KTGTCKYGSTCKYHHPKDRNGAG----PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
+TGTCK+G++CKYHHP+ G G PVS N +G P+R EK C Y+MRTG CKFG C
Sbjct: 108 RTGTCKFGASCKYHHPRQGGGGGDSVTPVSLNYMGFPLRPGEKECSYFMRTGQCKFGSTC 167
Query: 156 KFHHPQPSSLGTALPLTGNASLGSM---------------------GSSVLPSSGLQY-- 192
++HHP P + A S G +LP S +Q
Sbjct: 168 RYHHPVPPGVQAASQQQQQLSAGPTMYPSLQSQSVPSSQQYGVVLARPQILPGSYVQSPY 227
Query: 193 --------AGIVPAPGWNTYMGNIGPL-SPTS--IAGSNLIYS----SRNQGDLGAGAQM 237
G+VP GWN Y ++ + SP + G++ +Y S + +G
Sbjct: 228 GYGQMVIPPGMVPYSGWNPYQASVSAIPSPGTQPSIGTSSVYGITPLSPSAPAYQSGPSS 287
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 297
++ Q P+RP+QP+C+Y+M TG CK+G+ C+FHHP E A AS + +GLP RP
Sbjct: 288 TGVTNKEQTFPQRPEQPECQYFMRTGDCKFGSSCRFHHPME-AASPEASTLSHIGLPLRP 346
Query: 298 GQAICSNYSMYGICKFGPTCRFDH 321
G C++++ +GICKFGP C+FDH
Sbjct: 347 GAVPCTHFAQHGICKFGPACKFDH 370
>gi|226499720|ref|NP_001150792.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195638922|gb|ACG38929.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195641882|gb|ACG40409.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 447
Score = 240 bits (612), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 150/379 (39%), Positives = 198/379 (52%), Gaps = 55/379 (14%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCAYYLRTGACGYGERCRYNHP 67
Query: 74 -----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
G E PER GQP C YY K GTCK+GS CK+ HP++ +G PV+ N
Sbjct: 68 RDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-SGFVPVALNN 126
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSLGTALPLTG 173
G P+R EK C YYM+TG CKFG CKFHHP QPS + + P
Sbjct: 127 SGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPELGFLTETPGMYPPVQPSPISSPHPYPH 186
Query: 174 NASLGSMGSSVLPSSGLQ--------YAGIVPAPGWNTYMGNIGPLSPTSIAGSNLI--- 222
+++ +V+P S L ++P GWN Y + P++ T+ AG
Sbjct: 187 HSNWQMGRPAVVPGSFLPGPYPPMMLPPTVMPMQGWNPY---VSPMNQTTPAGGQQAVPA 243
Query: 223 ---YSSRNQGDLGAG------AQMHILSASSQNL-----PERPDQPDCRYYMNTGTCKYG 268
Y +Q A AQ++ SS N+ PERP QP+C +YM TGTCKYG
Sbjct: 244 GPSYGLSHQEPTSAVTYGSHYAQLYSSGTSSSNIQEYVFPERPGQPECEHYMKTGTCKYG 303
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
A CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP G P
Sbjct: 304 AACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPTCKFDHP-MGTP- 361
Query: 329 NYGLSLPPLSILDSSLMNH 347
NY L P L+ L + H
Sbjct: 362 NYSLPAPSLTDLPVAPYPH 380
>gi|356521891|ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 484
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 144/366 (39%), Positives = 190/366 (51%), Gaps = 64/366 (17%)
Query: 12 VANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
VA +EE+ W+L G+ A YP RP E DC++Y RTG CGYG+ CRFN
Sbjct: 21 VAADVDAGLEESSWQL---------GLPGAESYPMRPDEADCIYYLRTGFCGYGTRCRFN 71
Query: 72 HPA--YAAQGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSF 126
HP A GA R E PER GQP C YY++TG+CK+G++CKYHHP+ G A PV
Sbjct: 72 HPRDRAAVIGAAPRTGGEFPERVGQPVCQYYMRTGSCKFGASCKYHHPRQVPGTATPVPL 131
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-------------------- 166
N G P+R +K C YY++TG CKFG CKFHHPQP+ +
Sbjct: 132 NYYGYPLRVGQKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAPSPVPPVSPLPVPVPSP 191
Query: 167 ---TALPLTG--NASLGSMGSS--VLPSSGLQ--------YAGIVPAPGWNTYMG----N 207
T P +G G + + +LP S +Q +VP GW+ Y
Sbjct: 192 MYPTVHPPSGPSQQQYGVLVARPPMLPGSVVQGPYGPMVVSPTMVPFSGWSPYQAPATNP 251
Query: 208 IGPLSPTSIAGSNLIYSSRNQGDLGA---------GAQMHILSASSQN--LPERPDQPDC 256
+ P S TS GS +Y A G+ + AS + PERPDQP+C
Sbjct: 252 LLPSSTTSNVGSTQLYGITQLPSSAATYTGPYQPSGSSIGPSGASQKEHPFPERPDQPEC 311
Query: 257 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
+YM TG CK+G C++HHP ++ A A + P+GLP RPG C++Y+ G+CKFG
Sbjct: 312 HHYMKTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPCTHYTQRGVCKFGSA 371
Query: 317 CRFDHP 322
C+FDHP
Sbjct: 372 CKFDHP 377
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 54/101 (53%), Gaps = 13/101 (12%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 303
+++ P RPD+ DC YY+ TG C YG C+F+HP++R A A+ P R GQ +C
Sbjct: 41 AESYPMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQ 100
Query: 304 NYSMYGICKFGPTCRFDHP-------------YAGYPINYG 331
Y G CKFG +C++ HP Y GYP+ G
Sbjct: 101 YYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVG 141
>gi|242056893|ref|XP_002457592.1| hypothetical protein SORBIDRAFT_03g009920 [Sorghum bicolor]
gi|241929567|gb|EES02712.1| hypothetical protein SORBIDRAFT_03g009920 [Sorghum bicolor]
Length = 449
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 161/437 (36%), Positives = 210/437 (48%), Gaps = 69/437 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------ 73
+EE++ RL + D+ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 18 LEESMRRLGLGDDGEPG----EEKLPERPGEADCAYYLRTGACGYGERCRYNHPRDRPPP 73
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
E PER GQP C YY K GTCK+GS CK+ HP++ G PV+ N G P+
Sbjct: 74 VNGVGKTAGMVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-GGFVPVTLNSSGFPL 132
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSLGTALPLTGNASLG 178
R EK C YYM+TG CKFG CKFHHP QPS + ++ P A+
Sbjct: 133 RLGEKECSYYMKTGHCKFGSTCKFHHPEVGFLSETPGMYPPVQPSPISSSHPYPHLANWQ 192
Query: 179 SMGSSVLPSSGLQYA--------GIVPAPGWNTY---MGNIGPLSPTSIAGSNLIYSSRN 227
V+P S L + ++P GWN Y M + P + Y +
Sbjct: 193 MGRPPVVPGSFLPGSYPPMMLPPTVMPMQGWNPYVSPMNQVTPAGGQQAVPAGASYGLSH 252
Query: 228 QGDLGAG------AQMHILSASSQN------LPERPDQPDCRYYMNTGTCKYGADCKFHH 275
QG A AQ++ S +S + PERP QP+C +YM TGTCKYGA CK+HH
Sbjct: 253 QGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYMKTGTCKYGAVCKYHH 312
Query: 276 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 335
P+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP + P
Sbjct: 313 PQYFSGPKSNYMLSPLGLPLRPGSQPCAYYAHHGFCKFGPTCKFDHP---------MGTP 363
Query: 336 PLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD------AVSVQHQNPDMKNST 389
SI SSL + HS +P +P ++ +SD V NP T
Sbjct: 364 NYSISASSLADVPVAPYPHSFPVTP-----MPPYLPSSDLRPQYTLVKDSSANPPPAPGT 418
Query: 390 TKNSDDSSKVDHPPHSV 406
T S + PH++
Sbjct: 419 TYGPVGSMSKVYAPHTL 435
>gi|357477237|ref|XP_003608904.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509959|gb|AES91101.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 573
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 127/319 (39%), Positives = 171/319 (53%), Gaps = 44/319 (13%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-------AAQGAQYREELPERNGQPDCG 96
+P RP DC FY +TG C +G NC+FNHP + + REE E GQ +C
Sbjct: 231 FPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECK 290
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YY ++G CK+G CKY+H R P+S N LGLP+R E+ CPYYMRTGSCKFG C
Sbjct: 291 YYQRSGGCKFGKACKYNHS--RGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNC 348
Query: 156 KFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGN---IGPLS 212
+F+HP P+++G + P +G + GS+ L+ P W++ N PL
Sbjct: 349 RFNHPDPTTVGGSDPQSGYGNGGSVS--------LRGVSQQPVASWSSRKLNETPFAPLM 400
Query: 213 PTSIAGSNLIYSSRNQGDLGAGAQMHILSASS-----------------------QNLPE 249
PT G S N A I+ SS + PE
Sbjct: 401 PTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTIDTNVYMHHQKQMPFEVFPE 460
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
RP +P+C +++ TG CK+ ++CKFHHPK R+A+ N+ GLP RP Q++CS+YS YG
Sbjct: 461 RPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYSRYG 520
Query: 310 ICKFGPTCRFDHPYAGYPI 328
ICKFGP CRFDHP + P+
Sbjct: 521 ICKFGPACRFDHPESALPL 539
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSR-P 297
S + P RP+ DC +YM TG+CK+G +CKF+HP R Q+ A + P
Sbjct: 225 SDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENA 284
Query: 298 GQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYG 331
GQ C Y G CKFG C+++H + G PI G
Sbjct: 285 GQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLG 329
>gi|79395677|ref|NP_187292.2| zinc finger CCCH domain-containing protein 34 [Arabidopsis
thaliana]
gi|150387824|sp|Q9SQU4.2|C3H34_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 34;
Short=AtC3H34; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 2
gi|110741372|dbj|BAF02236.1| hypothetical protein [Arabidopsis thaliana]
gi|332640868|gb|AEE74389.1| zinc finger CCCH domain-containing protein 34 [Arabidopsis
thaliana]
Length = 462
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 194/352 (55%), Gaps = 52/352 (14%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQ 78
+E +WRL + GGG ++ YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 29 VEAPMWRLGLSGGGGGGGGGES--YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAV 86
Query: 79 GAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLP 132
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG P
Sbjct: 87 IGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYP 146
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG------------------TALPLTGN 174
+R EK C YY+RTG CKFG+ C+F+HP P ++ T P +
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 206
Query: 175 AS--------LGSMGSSVLPSSGLQYA---------GIVPAPGWNTYMGNIGPL-SPTS- 215
S L S L S LQ G+VP GWN Y ++ + SP +
Sbjct: 207 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQ 266
Query: 216 -IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 269
GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+G+
Sbjct: 267 PSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGS 326
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 327 SCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
>gi|110740437|dbj|BAF02113.1| hypothetical protein [Arabidopsis thaliana]
Length = 462
Score = 239 bits (610), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 140/352 (39%), Positives = 194/352 (55%), Gaps = 52/352 (14%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQ 78
+E +WRL + GGG ++ YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 29 VEAPMWRLGLSGGGGGGGGGES--YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAV 86
Query: 79 GAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLP 132
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG P
Sbjct: 87 IGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYP 146
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG------------------TALPLTGN 174
+R EK C YY+RTG CKFG+ C+F+HP P ++ T P +
Sbjct: 147 LRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQS 206
Query: 175 AS--------LGSMGSSVLPSSGLQYA---------GIVPAPGWNTYMGNIGPL-SPTS- 215
S L S L S LQ G+VP GWN Y ++ + SP +
Sbjct: 207 QSIPSSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQ 266
Query: 216 -IAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 269
GS+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+G+
Sbjct: 267 PSIGSSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGS 326
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C++HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 327 SCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 378
>gi|225456787|ref|XP_002277300.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera]
gi|297733636|emb|CBI14883.3| unnamed protein product [Vitis vinifera]
Length = 484
Score = 238 bits (608), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/358 (40%), Positives = 190/358 (53%), Gaps = 51/358 (14%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
+++D+ EE L+ + A+ YP RP DC FY RTG C +GSNC+FNHP
Sbjct: 98 KASDDEEEQCENLEDESAAKDDKSARFQ-YPVRPDAVDCSFYLRTGTCKFGSNCKFNHPI 156
Query: 74 ------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SF 126
A + +EE PER GQ +C YYL+TG CK+G C+Y+H K + A PV
Sbjct: 157 RRKNQVAKEKVKEKEKEEFPERPGQTECKYYLRTGGCKFGKACRYNHTKAKPSAVPVLEL 216
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT-----------ALPLTGNA 175
N LGLP+R EK CPYYMRTGSCK+G C+F+HP P++ G ++PL G A
Sbjct: 217 NFLGLPIRMGEKECPYYMRTGSCKYGANCRFNHPDPTAAGGYESPSGYGNGGSVPLQG-A 275
Query: 176 SLGSMGSSVLPSSGLQYAGIVPA------------PGWNTYMGNIGPLS--------PTS 215
S +M S P + + A VP P WN Y + P P +
Sbjct: 276 SQSNMASWSSPRALNEPAPFVPIMFSPTQGVPPPNPEWNGYQAPLYPPPPPERSMHPPPA 335
Query: 216 IAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 275
+N + G Q I ++ PERP QP+C Y++ TG CK+ A CK+HH
Sbjct: 336 FVINNTATDANVYGHHQQQQQSLI-----EDFPERPGQPECSYFLKTGDCKFRAACKYHH 390
Query: 276 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
PK RI +S + GLP RP Q IC++Y+ YGICKFGP C+FDH P+NYG S
Sbjct: 391 PKNRIPKSPPCTLSDKGLPLRPDQNICTHYNRYGICKFGPACKFDH-----PVNYGNS 443
>gi|357129786|ref|XP_003566542.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 2 [Brachypodium distachyon]
Length = 472
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 142/352 (40%), Positives = 187/352 (53%), Gaps = 56/352 (15%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + E A P RPGE +C++Y RTG C YG +CR+NHP A A
Sbjct: 33 LEESMWRLGLGGGGEA-----APRLPERPGEANCIYYLRTGSCSYGESCRYNHPRDRAAA 87
Query: 77 AQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL 131
G E PER GQP C YY+K GTCK+GS CKY+HP++ PV+ N G
Sbjct: 88 FNGGARTTIAMGVEYPERPGQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQPVALNTSGY 147
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA------------LPLTGNASLGS 179
P+R EK C YY++TG CKFG CKFHHP LG LP++ +
Sbjct: 148 PLRPGEKECSYYIKTGHCKFGSTCKFHHPDGPELGVVSETPSMYPPAQPLPMSSPLTYPP 207
Query: 180 MGS------SVLPSSGLQ--------YAGIVPAPGWNTYMGNIGPLSPTSIAG-----SN 220
+ S SVLP S Q + ++P GWN YM ++ L+ S G +
Sbjct: 208 LASWQLGRPSVLPGSFYQGSYPPMVHPSAVIPMQGWNPYMSSMNQLA--SAGGQQNVQAG 265
Query: 221 LIYSSRNQG---DLGAGAQMHILSASSQ-------NLPERPDQPDCRYYMNTGTCKYGAD 270
+Y +QG + G+ L +S+ PERP QP+C +YM TGTCK+GA
Sbjct: 266 PLYGLSHQGPSSSVAYGSNYAPLPSSTWPSSNKQVAFPERPGQPECHHYMKTGTCKFGAT 325
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
CK+ HP+ A ++ + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 326 CKYSHPQYLSAPNSNCMLSPLGLPIRPGAQQCVYYSQHGFCKFGPRCKFDHP 377
>gi|226530435|ref|NP_001147888.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
gi|195614408|gb|ACG29034.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 451
Score = 238 bits (607), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 210/450 (46%), Gaps = 69/450 (15%)
Query: 7 VKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGS 66
KS + +E+++ RL + D+ E G P RPGE DC +Y RTG CGYG
Sbjct: 7 AKSGGADAGTGTGLEDSMRRLGLGDDGEAG----EEKLPERPGEADCAYYLRTGACGYGE 62
Query: 67 NCRFNHP------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
CR+NHP E PER GQP C YY K GTCK+GS CK+ HP++ G
Sbjct: 63 RCRYNHPRDRPAPVNGVGKTAVTVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-GG 121
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSL 165
PV+ N G P+R EK C YYM+TG CKFG CKFHHP QP +
Sbjct: 122 FVPVTLNSGGFPLRLGEKECSYYMKTGHCKFGATCKFHHPELGFLTETPGMYPPVQPPPI 181
Query: 166 GTALPLTGNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGPLSPTSIA 217
++ P A+ V+P S L + ++P GWN Y+ + ++P
Sbjct: 182 SSSHPYPHLANWQMGRPPVVPGSFLPGSYPPMVLPHTVIPMQGWNPYVPPMNQVTPAGGQ 241
Query: 218 GSNLIYSSRNQGDLGAGAQMHILSASSQ---------------NLPERPDQPDCRYYMNT 262
+ + +S G + M S +Q PERP QP+C +YM T
Sbjct: 242 QAVPVGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYMKT 301
Query: 263 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
GTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 302 GTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYAHHGYCKFGPTCKFDHP 361
Query: 323 YAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA------V 376
+ P SI SSL + S +P +P+++ +SD V
Sbjct: 362 ---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----VPSYLPSSDLRPQYTQV 407
Query: 377 SVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 406
NP TT S + PH++
Sbjct: 408 KDSSANPPPSPGTTYGPVGSISKVYAPHTL 437
>gi|297833390|ref|XP_002884577.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
lyrata]
gi|297330417|gb|EFH60836.1| hypothetical protein ARALYDRAFT_477944 [Arabidopsis lyrata subsp.
lyrata]
Length = 454
Score = 238 bits (606), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 190/348 (54%), Gaps = 52/348 (14%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAA 77
+E ++WRL + YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 28 GLEASMWRLGLSGGG-------GESYPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGA 80
Query: 78 QGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGL 131
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG
Sbjct: 81 VIGGVRGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGY 140
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG--------------TALPLTGNAS- 176
P+R EK C YY+RTG CKFG+ C+F+HP P ++ T P + S
Sbjct: 141 PLRPGEKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQHQQQQQPQLQTIYPTLQSQSV 200
Query: 177 -------LGSMGSSVLPSSGLQYA---------GIVPAPGWNTYMGNIGPL-SPTS--IA 217
L S+LP S L G+VP GWN Y ++ + SP +
Sbjct: 201 PSSQQYGLVLTRPSLLPGSYLPSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSI 260
Query: 218 GSNLIYS----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
GS+ +Y S + Q S +S+ P+RPDQP+C+Y+M TG CK+G+ C++
Sbjct: 261 GSSSVYGITPLSPSVTAYTGAYQSGPSSNTSKEFPQRPDQPECQYFMRTGDCKFGSSCRY 320
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
HHP + + + +GLP RPG A C+++S +GICKFGP CRFDH
Sbjct: 321 HHPVDAVPPKTGLVLSSIGLPLRPGVAQCTHFSQHGICKFGPACRFDH 368
>gi|223948749|gb|ACN28458.1| unknown [Zea mays]
gi|224031379|gb|ACN34765.1| unknown [Zea mays]
gi|407232626|gb|AFT82655.1| C3H12 C3H type transcription factor, partial [Zea mays subsp. mays]
gi|414876866|tpg|DAA53997.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 3
[Zea mays]
Length = 451
Score = 237 bits (605), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 156/450 (34%), Positives = 210/450 (46%), Gaps = 69/450 (15%)
Query: 7 VKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGS 66
KS + +E+++ RL + D+ E G P RPGE DC +Y RTG CGYG
Sbjct: 7 AKSGGADAGTGTGLEDSMRRLGLGDDGEAG----EEKLPERPGEADCAYYLRTGACGYGE 62
Query: 67 NCRFNHP------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
CR+NHP E PER GQP C YY K GTCK+GS CK+ HP++ G
Sbjct: 63 RCRYNHPRDRPAPVNGVGKTAVTVEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-GG 121
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSL 165
PV+ N G P+R EK C YYM+TG CKFG CKFHHP QP +
Sbjct: 122 FVPVTLNSGGFPLRLGEKECSYYMKTGHCKFGATCKFHHPELGFLTETPGMYPPVQPPPI 181
Query: 166 GTALPLTGNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGPLSPTSIA 217
++ P A+ V+P S L + ++P GWN Y+ + ++P
Sbjct: 182 SSSHPYPHLANWQMGRPPVVPGSFLPGSYPPMVLPHTVIPMQGWNPYVPPMNQVTPAGGQ 241
Query: 218 GSNLIYSSRNQGDLGAGAQMHILSASSQ---------------NLPERPDQPDCRYYMNT 262
+ + +S G + M S +Q PERP QP+C +YM T
Sbjct: 242 QAVPVGASYGLSHQGPTSAMTYGSHYAQLYSSSGTSSSNIQEYAFPERPGQPECEHYMKT 301
Query: 263 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
GTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 302 GTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYAHHGYCKFGPTCKFDHP 361
Query: 323 YAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA------V 376
+ P SI SSL + S +P +P+++ +SD V
Sbjct: 362 ---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----MPSYLPSSDLRPQYTQV 407
Query: 377 SVQHQNPDMKNSTTKNSDDSSKVDHPPHSV 406
NP TT S + PH++
Sbjct: 408 KDSSANPPPSPGTTYGPVGSISKVYAPHTL 437
>gi|255540399|ref|XP_002511264.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223550379|gb|EEF51866.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 495
Score = 237 bits (605), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 132/313 (42%), Positives = 175/313 (55%), Gaps = 36/313 (11%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELPERNGQPDCGYY 98
YP RP DC +Y +TG C +GSNC+FNHP + + + REE +R GQ +C YY
Sbjct: 141 YPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRKMQVSKEKVKEREEATDRPGQTECKYY 200
Query: 99 LKTGTCKYGSTCKYHHPKDR-------NGAGP-VSFNILGLPMRQDEKSCPYYMRTGSCK 150
L+TG CKYG C+Y+H + + P + N LGLP+R E+ CPYYMR GSCK
Sbjct: 201 LRTGGCKYGKACRYNHSRAKPLLLQAKTAVFPALDLNFLGLPIRPGERECPYYMRNGSCK 260
Query: 151 FGVACKFHHPQPSSLGTALPLT----GNASL-GSMGSSVLPSS---GLQ----YAGI--- 195
+G C+F+HP P+++G + PL G+ASL S+ S++ S GL + I
Sbjct: 261 YGANCRFNHPDPTTVGGSDPLAFSNGGSASLQNSLQSNIASWSSPGGLNETPSFMSIMFS 320
Query: 196 ----VPA--PGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPE 249
VP+ P WN Y PL S+ S D A + + PE
Sbjct: 321 PTQGVPSQNPEWNGYQVCYFPLYERSMHQPPAYVISNPATDTNVYAHQQQIQV--EEFPE 378
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
RP QP+C Y+M TG CK+ ++CK+HHPK I++S + GLP RPGQ ICS YS YG
Sbjct: 379 RPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNICSYYSRYG 438
Query: 310 ICKFGPTCRFDHP 322
ICKFGP C+FDHP
Sbjct: 439 ICKFGPACKFDHP 451
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 125/303 (41%), Gaps = 63/303 (20%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQD------EK 138
+ P R DC YY+KTGTCK+GS CK++HP R + + + R++ +
Sbjct: 140 QYPVRPEAEDCSYYMKTGTCKFGSNCKFNHPVKRK----MQVSKEKVKEREEATDRPGQT 195
Query: 139 SCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPA 198
C YY+RTG CK+G AC+++H + A PL L ++V P+ L + G+
Sbjct: 196 ECKYYLRTGGCKYGKACRYNHSR------AKPL-----LLQAKTAVFPALDLNFLGLPIR 244
Query: 199 PGWNT---YMGN----------IGPLSPTSIAGSN-LIYSSRNQGDLGAGAQMHILSASS 244
PG YM N PT++ GS+ L +S+ L Q +I S SS
Sbjct: 245 PGERECPYYMRNGSCKYGANCRFNHPDPTTVGGSDPLAFSNGGSASLQNSLQSNIASWSS 304
Query: 245 -QNLPERPDQPDCRYYMNTGTCKYGAD------CKF-------HHPKERIAQSAASN--- 287
L E P + G + C F H P + + A++
Sbjct: 305 PGGLNETPSFMSIMFSPTQGVPSQNPEWNGYQVCYFPLYERSMHQPPAYVISNPATDTNV 364
Query: 288 ------IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILD 341
I P RPGQ CS + G CKF C++ H P N+ PP + D
Sbjct: 365 YAHQQQIQVEEFPERPGQPECSYFMKTGDCKFKSNCKYHH-----PKNHISKSPPCVLSD 419
Query: 342 SSL 344
L
Sbjct: 420 KGL 422
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDC 95
Q +P RPG+P+C ++ +TG C + SNC+++HP + + LP R GQ C
Sbjct: 372 QVEEFPERPGQPECSYFMKTGDCKFKSNCKYHHPKNHISKSPPCVLSDKGLPLRPGQNIC 431
Query: 96 GYYLKTGTCKYGSTCKYHHP 115
YY + G CK+G CK+ HP
Sbjct: 432 SYYSRYGICKFGPACKFDHP 451
>gi|357129784|ref|XP_003566541.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
isoform 1 [Brachypodium distachyon]
Length = 472
Score = 237 bits (604), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 142/353 (40%), Positives = 188/353 (53%), Gaps = 57/353 (16%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ- 78
+EE++WRL + E A P RPGE +C++Y RTG C YG +CR+NHP A
Sbjct: 32 LEESMWRLGLGGGGEA-----APRLPERPGEANCIYYLRTGSCSYGESCRYNHPRDRAAA 86
Query: 79 ----GAQYR----EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
GA+ E PER GQP C YY+K GTCK+GS CKY+HP++ PV+ N G
Sbjct: 87 EFNGGARTTIAMGVEYPERPGQPLCEYYMKNGTCKFGSNCKYNHPREGGPVQPVALNTSG 146
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA------------LPLTGNASLG 178
P+R EK C YY++TG CKFG CKFHHP LG LP++ +
Sbjct: 147 YPLRPGEKECSYYIKTGHCKFGSTCKFHHPDGPELGVVSETPSMYPPAQPLPMSSPLTYP 206
Query: 179 SMGS------SVLPSSGLQ--------YAGIVPAPGWNTYMGNIGPLSPTSIAG-----S 219
+ S SVLP S Q + ++P GWN YM ++ L+ S G +
Sbjct: 207 PLASWQLGRPSVLPGSFYQGSYPPMVHPSAVIPMQGWNPYMSSMNQLA--SAGGQQNVQA 264
Query: 220 NLIYSSRNQG---DLGAGAQMHILSASSQ-------NLPERPDQPDCRYYMNTGTCKYGA 269
+Y +QG + G+ L +S+ PERP QP+C +YM TGTCK+GA
Sbjct: 265 GPLYGLSHQGPSSSVAYGSNYAPLPSSTWPSSNKQVAFPERPGQPECHHYMKTGTCKFGA 324
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
CK+ HP+ A ++ + PLGLP RPG C YS +G CKFGP C+FDHP
Sbjct: 325 TCKYSHPQYLSAPNSNCMLSPLGLPIRPGAQQCVYYSQHGFCKFGPRCKFDHP 377
>gi|356536737|ref|XP_003536892.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing
protein 32-like [Glycine max]
Length = 473
Score = 237 bits (604), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 140/351 (39%), Positives = 195/351 (55%), Gaps = 64/351 (18%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++W L + GGG YP RPG P+C++Y RTG+CGYG CR+NHP A
Sbjct: 30 LEESMWHLTL-----GGG---GESYPERPGVPNCVYYMRTGVCGYGGRCRYNHPHDRAAV 81
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPM 133
+ + PER G+P C YYLKTGTCK+G++CK+HHPK NG +S N+ G P+
Sbjct: 82 VAAVRVTGDYPERLGEPPCQYYLKTGTCKFGASCKFHHPK--NGGEYLSQAPLNVYGYPL 139
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP---------------------LT 172
R DEK C YY++TG CK+G++CKFHHPQP+ GT+LP +
Sbjct: 140 RSDEKECSYYLKTGQCKYGISCKFHHPQPA--GTSLPASAAQFYQQVQSPTVPLPEQYVG 197
Query: 173 GNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTY----MGNIGPLSPTSIAGSN 220
++SL +LP S +Q A G+V PGWN Y M + P + + ++
Sbjct: 198 ASSSLRVARPPILPGSYVQGAYGPVFLSPGVVQFPGWNHYSVRGMCAL-PGTQPGVGATS 256
Query: 221 LIYSSRNQGDLGAGAQMHILSASSQNL----------PERPDQPDCRYYMNTGTCKYGAD 270
L ++ A A+ + L SS L P+RP +PDC+YY+ TG CK+G
Sbjct: 257 LYGVTQLSSPTSAFARPYTLLPSSTGLSGSNLKEQLYPKRPGEPDCQYYLRTGDCKFGLA 316
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C++HHP++ + A + P+GLP RPG C+ Y G CKFG TC+FDH
Sbjct: 317 CQYHHPQDHVV--AQPLLSPVGLPLRPGLQPCAFYLQNGHCKFGSTCKFDH 365
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R + CS Y
Sbjct: 90 DYPERLGEPPCQYYLKTGTCKFGASCKFHHPKNGGEYLSQAPLNVYGYPLRSDEKECSYY 149
Query: 306 SMYGICKFGPTCRFDHP 322
G CK+G +C+F HP
Sbjct: 150 LKTGQCKYGISCKFHHP 166
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPGEPDC +Y RTG C +G C+++HP AQ LP R G C +YL+
Sbjct: 293 YPKRPGEPDCQYYLRTGDCKFGLACQYHHPQDHVVAQPLLSPVGLPLRPGLQPCAFYLQN 352
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
G CK+GSTCK+ H P + +++ +P+
Sbjct: 353 GHCKFGSTCKFDHSLGSMRYSPSASSLIDVPV 384
>gi|358348997|ref|XP_003638527.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355504462|gb|AES85665.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 511
Score = 236 bits (603), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 137/345 (39%), Positives = 183/345 (53%), Gaps = 58/345 (16%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREE 85
D + GG Q YP RP DC FY +TG C +G NC+FNHP + A R+E
Sbjct: 161 DERSNGGAEQ---YPLRPEAEDCSFYLKTGTCKFGFNCKFNHPLGRRNQVFRERAGERDE 217
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYM 144
L ER+ Q +C YY ++G CK+G CK+ H + + A V N LGLP+R EK CPYYM
Sbjct: 218 LEERSSQTECKYYSRSGGCKFGKDCKFDHTRGKFSADQVLELNFLGLPIRLGEKECPYYM 277
Query: 145 RTGSCKFGVACKFHHPQPSSLG--TALPLTGNASLGSMG----SSVLPSSGLQYAG---- 194
RTGSCKFG CKF+HP P+S+G + GN S S+ SS P S +
Sbjct: 278 RTGSCKFGANCKFNHPDPTSVGGYDSTAGYGNGSTTSLQDVSQSSTPPWSSTRKFNETAP 337
Query: 195 -----IVPAPG-------WNTYMG-------NIGPLSPTSIAGSNLIYSSRNQGDLGAGA 235
I P PG WN Y ++ P SP ++ N + A
Sbjct: 338 FVPIIISPTPGASPRSSDWNGYQAPFYLSERSMHPPSPYAV----------NNPAMEMNA 387
Query: 236 QMHILSAS-SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 294
MH + + PERP +P+C +++ TG CK+ + CKFHHPK RI + N+ GLP
Sbjct: 388 YMHRHKHTPVEEFPERPGEPECSFFLKTGDCKFKSHCKFHHPKNRITKLPPCNLSDKGLP 447
Query: 295 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
RPGQ +C++YS YGICKFGP C++DHP ++LPP ++
Sbjct: 448 LRPGQNVCTHYSRYGICKFGPACKYDHP---------INLPPPTM 483
>gi|6437560|gb|AAF08587.1|AC011623_20 hypothetical protein [Arabidopsis thaliana]
Length = 437
Score = 236 bits (602), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 139/348 (39%), Positives = 192/348 (55%), Gaps = 52/348 (14%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQY 82
+WRL + GGG ++ YP RP EPDC++Y RTG+CGYGS CRFNHP A
Sbjct: 8 MWRLGLSGGGGGGGGGES--YPERPDEPDCIYYLRTGVCGYGSRCRFNHPRDRGAVIGGV 65
Query: 83 REE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLPMRQD 136
R E LPER G P C ++++TGTCK+G++CKYHHP+ G G PVS + LG P+R
Sbjct: 66 RGEAGALPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPG 125
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLG------------------TALPLTGNAS-- 176
EK C YY+RTG CKFG+ C+F+HP P ++ T P + S
Sbjct: 126 EKECSYYLRTGQCKFGLTCRFNHPVPLAVQGPPQQPQQQQPQPQPQLQTIYPTLQSQSIP 185
Query: 177 ------LGSMGSSVLPSSGLQYA---------GIVPAPGWNTYMGNIGPL-SPTS--IAG 218
L S L S LQ G+VP GWN Y ++ + SP + G
Sbjct: 186 SSQQYGLVLTRPSFLTGSYLQSPYGPPMVLPPGMVPYSGWNPYQASLSAMPSPGTQPSIG 245
Query: 219 SNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
S+ IY S G + +++S+ P+RPDQP+C+Y+M TG CK+G+ C++
Sbjct: 246 SSSIYGLTPLSPSATAYTGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRY 305
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
HHP + + + +GLP RPG A C++++ +GICKFGP C+FDH
Sbjct: 306 HHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDH 353
>gi|15242694|ref|NP_201131.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
gi|62901484|sp|Q5RJC5.2|C3H67_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 67;
Short=AtC3H67; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 5
gi|10177307|dbj|BAB10568.1| unnamed protein product [Arabidopsis thaliana]
gi|110737489|dbj|BAF00687.1| hypothetical protein [Arabidopsis thaliana]
gi|332010341|gb|AED97724.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
Length = 435
Score = 235 bits (600), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 130/348 (37%), Positives = 178/348 (51%), Gaps = 44/348 (12%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V + + A++ + +EG YP RP DC FY RTG C YGS+C+F
Sbjct: 65 SVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKF 124
Query: 71 NHPA-----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV- 124
NHP + + R+E E +C YY +TG CKYG +C++ H K+ N V
Sbjct: 125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVP 184
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-TALPLTGNASLGSMG-- 181
N LGLP+R EK CP+YMR GSCKFG CKF+HP P+++G PL + GS
Sbjct: 185 ELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPK 244
Query: 182 ---------------------SSVLPSSGLQYAGIVP-APGWNTYMGNIG------PLSP 213
+ +PS G+ P A WN Y + PL+P
Sbjct: 245 APSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAP 304
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
+S +N + + + + S + PERPDQP+C YY+ TG CK+ CK+
Sbjct: 305 SSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKY 357
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 358 HHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R SFN GLP+R D+ C +
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 388
Query: 143 YMRTGSCKFGVACKFHHPQPSSL 165
Y R G CKFG AC+F H P +
Sbjct: 389 YSRYGICKFGPACRFDHSIPPTF 411
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 309 GICKFGPTCRFDHP 322
G CKFG C+F+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
>gi|413947007|gb|AFW79656.1| zinc finger CCCH type domain-containing protein ZFN-like 3 [Zea
mays]
Length = 448
Score = 234 bits (598), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 149/401 (37%), Positives = 200/401 (49%), Gaps = 65/401 (16%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
Query: 74 -----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
G E PER GQP C YY K GTCK+GS CK+ HP++ +G PV+ N
Sbjct: 68 RDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-SGFVPVALNN 126
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSLGTALPLTG 173
G P+R EK C YYM+TG CKFG CKFHHP QPS + + P
Sbjct: 127 SGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPELGFLTETPGMYPPVQPSPISSPHPYPH 186
Query: 174 NASLGSMGSSVLPSSGLQ--------YAGIVPAPGWNTYMGNIGPLSPTSIAG------- 218
+++ +V+P S L ++P GWN Y + P++ T+ AG
Sbjct: 187 HSNWQMGRPAVVPGSFLPGPYPPMMLPPTVMPMQGWNPY---VSPMNQTTPAGGQQAVPA 243
Query: 219 ------------SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
S + Y S + L + + + PERP QP+C +YM TGTCK
Sbjct: 244 GPSYGLSHQEPTSAVTYGS-HYAQLYSSSGTSSSNIQEYVFPERPGQPECEHYMKTGTCK 302
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
YGA CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP G
Sbjct: 303 YGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYAHHGFCKFGPTCKFDHP-MGT 361
Query: 327 PINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIP 367
P NY L P SL + H+ +P A +P
Sbjct: 362 P-NYSLPAP-------SLTDVPVAPYPHTFSVTPIAPYLLP 394
>gi|356563166|ref|XP_003549835.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 501
Score = 234 bits (597), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 125/336 (37%), Positives = 175/336 (52%), Gaps = 46/336 (13%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQYREE 85
+ +EGG A YP RP DC FY +TG C +G NC+FNHP + A REE
Sbjct: 137 EKKEGGNSGLAQHYPLRPEAEDCAFYIKTGNCKFGFNCKFNHPIRRKSQAVKEKAGEREE 196
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNILGLPMRQDEKSCPY 142
ER+G +C YY ++G CK+G +CKY+H + + P + N LGLP+R E+ CPY
Sbjct: 197 TTERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRLGERECPY 256
Query: 143 YMRTGSCKFGVACKFHHPQPSSLGTA--LPLTGNASLGSMGSSVLPSSGLQYAGIVPAPG 200
YMRTGSCKFG CKF+HP P+++G P +G + GS+ LQ P
Sbjct: 257 YMRTGSCKFGANCKFNHPDPTAVGGVGGDPASGYGNGGSI--------SLQGVSQTSVPS 308
Query: 201 WNT--YMGNIGPLSPTSIAGSNLIYSS-------------------------RNQGDLGA 233
W++ + P P ++ + + + N +
Sbjct: 309 WSSPRTLNESSPFVPMMLSPTQGVSTQSSDWNGYQASVYLPERNMHPPSTFVMNNPAIDT 368
Query: 234 GAQM-HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
M H PERP +P+C Y++ TG CK+ ++CKF+HPK R+A+ N+ G
Sbjct: 369 NVYMHHQKQMPVDEFPERPGEPECSYFLKTGDCKFKSNCKFNHPKNRVARLPPCNLSDKG 428
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
LP RP Q++CS+YS YGICKFGP C+FDHP P+
Sbjct: 429 LPLRPDQSVCSHYSRYGICKFGPACKFDHPINLQPV 464
>gi|55819798|gb|AAV66094.1| At5g63260 [Arabidopsis thaliana]
gi|56790210|gb|AAW30022.1| At5g63260 [Arabidopsis thaliana]
Length = 435
Score = 234 bits (597), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 129/348 (37%), Positives = 178/348 (51%), Gaps = 44/348 (12%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V + + A++ + +EG YP +P DC FY RTG C YGS+C+F
Sbjct: 65 SVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPVKPDSEDCSFYMRTGSCKYGSSCKF 124
Query: 71 NHPA-----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV- 124
NHP + + R+E E +C YY +TG CKYG +C++ H K+ N V
Sbjct: 125 NHPVRRKLQIGRERVRERDEDVENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVP 184
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-TALPLTGNASLGSMG-- 181
N LGLP+R EK CP+YMR GSCKFG CKF+HP P+++G PL + GS
Sbjct: 185 ELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGVDSPLYRGNNGGSFSPK 244
Query: 182 ---------------------SSVLPSSGLQYAGIVP-APGWNTYMGNIG------PLSP 213
+ +PS G+ P A WN Y + PL+P
Sbjct: 245 APSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNGYQASSAYPPERSPLAP 304
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
+S +N + + + + S + PERPDQP+C YY+ TG CK+ CK+
Sbjct: 305 SSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKY 357
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP CRFDH
Sbjct: 358 HHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R SFN GLP+R D+ C +
Sbjct: 329 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 388
Query: 143 YMRTGSCKFGVACKFHHPQPSSL 165
Y R G CKFG AC+F H P +
Sbjct: 389 YSRYGICKFGPACRFDHSIPPTF 411
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 147 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRN 206
Query: 309 GICKFGPTCRFDHP 322
G CKFG C+F+HP
Sbjct: 207 GSCKFGSDCKFNHP 220
>gi|22326848|ref|NP_568332.2| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
gi|4689376|gb|AAD27875.1|AF138872_1 zinc finger protein 3 [Arabidopsis thaliana]
gi|9759138|dbj|BAB09623.1| zinc finger protein 3 [Arabidopsis thaliana]
gi|332004923|gb|AED92306.1| zinc finger CCCH domain-containing protein 57 [Arabidopsis
thaliana]
Length = 368
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 145/380 (38%), Positives = 196/380 (51%), Gaps = 50/380 (13%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
+ A+W++ + + G YP R GEPDC +Y RTGLC +GS CRFNHP
Sbjct: 19 QNAMWQMNLGSDDTMGVDGS---YPERHGEPDCAYYIRTGLCRFGSTCRFNHPHDRKLVI 75
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQD 136
A+ + E PER GQP+C +YLKTGTCK+G TCK+HHP+++ G G VS N+L P+R +
Sbjct: 76 ATARIKGEYPERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPN 135
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIV 196
E C Y++R G CKFG CKF+HPQ S N + GS V S LQ
Sbjct: 136 EDDCSYFLRIGQCKFGGTCKFNHPQTQST--------NLMVSVRGSPVY--SALQSLTGQ 185
Query: 197 PAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL-------GAGAQMHILSASSQNL-P 248
P+ W+ P +G ++S +QG L G + + +N+ P
Sbjct: 186 PSYSWSRTSFVANPPRLQDPSG----FASGSQGGLFSSGFHSGNSVPLGFYALPRENVFP 241
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
ERP QP+C++YM TG CK+G CKFHHP++R P G+ +C YS Y
Sbjct: 242 ERPGQPECQFYMKTGDCKFGTVCKFHHPRDR-------QTPPPDCVLSSGEPLCVFYSRY 294
Query: 309 GICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAIS-------ATHSIETSPD 361
GICKFGP+C+FDHP + N + P S SSL AI+ + S+E P
Sbjct: 295 GICKFGPSCKFDHPMRVFTYNNNTASPSPS---SSLHQETAITTELRNLLVSSSVEAKP- 350
Query: 362 ASSKIPNWVQNSDA-VSVQH 380
+ +P D V QH
Sbjct: 351 --TSLPETTSAKDTIVDAQH 368
>gi|297596471|ref|NP_001042632.2| Os01g0257400 [Oryza sativa Japonica Group]
gi|62901483|sp|Q5NAV3.1|C3H5_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 5;
Short=OsC3H5; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 3
gi|56783956|dbj|BAD81393.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
gi|215707250|dbj|BAG93710.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255673074|dbj|BAF04546.2| Os01g0257400 [Oryza sativa Japonica Group]
Length = 466
Score = 233 bits (595), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 153/391 (39%), Positives = 200/391 (51%), Gaps = 73/391 (18%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQAS-PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+EE++WR+ + GGG A A+ P RPGE DC++Y RTG CGYG NCR+NHP A
Sbjct: 23 LEESMWRMGLGGGGGGGGEAVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAA 82
Query: 79 GA--------QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
A + E PER GQP C YY+K GTCK+GS CKY HP++ V N G
Sbjct: 83 AAVLNGGGKTTHSAEYPERPGQPVCEYYMKNGTCKFGSNCKYDHPRE-GSVQAVMLNSSG 141
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSLGTALPLTGNA 175
P+R EK C YY++TG CKFG CKFHHP QP + ++ P A
Sbjct: 142 YPLRSGEKDCTYYVKTGHCKFGSTCKFHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLA 201
Query: 176 SLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGPLSPTSIAGSNL------ 221
VLP S L + +VP GWN Y I P++ + AG +
Sbjct: 202 GWQMGRPPVLPGSFLSGSYPPMMLPSTVVPMQGWNPY---ISPVNQVASAGGHQTVQAGP 258
Query: 222 IYSSRNQGDLGA---GAQMHILSASSQN---------LPERPDQPDCRYYMNTGTCKYGA 269
Y +QG A G+Q LS+S+ P RP QP+C+YY+ TG+CK+G+
Sbjct: 259 FYGLSHQGPSAAVTYGSQYAPLSSSTMPSSSSKQEPAFPARPGQPECQYYLKTGSCKFGS 318
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY------ 323
CK+HHP+ + + PLGLP RPG C+ Y+ +G CKFGPTC+FDHP
Sbjct: 319 ACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYTQHGFCKFGPTCKFDHPMGTLSYS 378
Query: 324 -----------AGYPINYGLS--LPPLSILD 341
A YP+NY ++ PP S D
Sbjct: 379 PSASSITDLPIAPYPLNYAVAPVAPPSSSSD 409
>gi|326507710|dbj|BAJ86598.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518680|dbj|BAJ92501.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 233 bits (593), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 153/429 (35%), Positives = 207/429 (48%), Gaps = 57/429 (13%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++WRL + +E A P RPGE +C++Y RTG CGYG CR+NHP A A
Sbjct: 28 LEESMWRLGLAGGEE----AAGEGLPERPGEANCVYYLRTGACGYGETCRYNHPRDRAAA 83
Query: 77 AQG---AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
G E PER GQP C YY+K GTCK+GS CKY+HP++ PV N G P+
Sbjct: 84 FDGGIRTTRTVEYPERPGQPPCEYYMKNGTCKFGSNCKYNHPREGGSVQPVVLNSSGYPL 143
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA------------------LPLTGNA 175
R EK C YY++TG CKFG CKFHHP+ LG LP A
Sbjct: 144 RLGEKECSYYIKTGHCKFGSTCKFHHPEGPELGVVSEPPNMYPPVQQLPVSSPLPYPPLA 203
Query: 176 SLGSMGSSVLPSSG--------LQYAGIVPAPGWNTYMGNIGPLSPT---SIAGSNLIYS 224
S SVLP S + + ++P GWN YM + ++P + +Y
Sbjct: 204 SWQLGRPSVLPGSFFPGSYPPMMHPSAVMPMQGWNPYMSPMNQVAPAGGQQTVQAGPLYG 263
Query: 225 SRNQGDLGAGA-----------QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
+QG A A PERP QP+C +YM TGTCK+G+ CK+
Sbjct: 264 LSHQGPPSAVAYGSNYASLSSSTWPSSDKQEVVFPERPGQPECHHYMKTGTCKFGSTCKY 323
Query: 274 HHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLS 333
+HP+ + + PLGLP RPG C YS +G CKFGP C+FDHP ++Y S
Sbjct: 324 NHPQYLSTPRSNYMLSPLGLPIRPGAQPCLYYSQHGFCKFGPGCKFDHPLGA--LSYSPS 381
Query: 334 LPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTTKNS 393
S+ D + + + SP +S P ++ D+ + Q +P +T +
Sbjct: 382 A--SSLGDMPIAPYPLSLPVAPMAPSPSSSGLRPEYILAKDSSANQPASP---GTTFGPA 436
Query: 394 DDSSKVDHP 402
SK+ P
Sbjct: 437 GQMSKIYAP 445
>gi|297735285|emb|CBI17647.3| unnamed protein product [Vitis vinifera]
Length = 304
Score = 232 bits (592), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/294 (45%), Positives = 174/294 (59%), Gaps = 31/294 (10%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YYLKTGTCK+G+TCK+HHP+D+ G AG VS NILG P+R DE C YY+RTG CKFG C
Sbjct: 14 YYLKTGTCKFGATCKFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTC 73
Query: 156 KFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ----YA------GIVPAPGWNTYM 205
KFHHPQPSS+ +L N L +S +PS Q YA G+V PGWN Y
Sbjct: 74 KFHHPQPSSMMVSLRGITNWPLSR--ASFIPSPRWQAPSSYAPLMLPQGVVSVPGWNAYS 131
Query: 206 GNIGPLSPTS--IAGSNLIY-SSRNQGDLGAGAQ------------MHILSASSQNL-PE 249
G +G S + G+N IY +SR G+Q + + +N+ PE
Sbjct: 132 GQLGSPSESQQQTGGNNQIYGTSRQSEQPNTGSQGTFSPYRSGSVPIGFYALQRENVFPE 191
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
RP QP+C++YM TG CK+GA C+FHHP+ER+ + + P+GLP RPG+ +C YS YG
Sbjct: 192 RPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPLCIFYSRYG 251
Query: 310 ICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDAS 363
ICKFGP+C+FDHP + N S + + L+ H+A AT + DAS
Sbjct: 252 ICKFGPSCKFDHPMGIFAYNLSASSSADAPVVRRLL-HKA-QATFTARDKTDAS 303
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKS 139
Q PER GQP+C +Y+KTG CK+G+ C++HHP++R P + +GLP+R E
Sbjct: 184 QRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERLIPTPDCVLSPIGLPLRPGEPL 243
Query: 140 CPYYMRTGSCKFGVACKFHHP 160
C +Y R G CKFG +CKF HP
Sbjct: 244 CIFYSRYGICKFGPSCKFDHP 264
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 22/85 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-------------LPERN 90
+P RPG+P+C FY +TG C +G+ CRF+HP RE LP R
Sbjct: 189 FPERPGQPECQFYMKTGDCKFGAVCRFHHP---------RERLIPTPDCVLSPIGLPLRP 239
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHP 115
G+P C +Y + G CK+G +CK+ HP
Sbjct: 240 GEPLCIFYSRYGICKFGPSCKFDHP 264
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 28 KIHDNQEGGGVA-----QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K H ++ G+A YP RP E DC +Y RTG C +GS C+F+HP
Sbjct: 28 KFHHPRDKAGIAGRVSLNILGYPLRPDEIDCAYYLRTGQCKFGSTCKFHHP 78
>gi|449432823|ref|XP_004134198.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Cucumis sativus]
Length = 481
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 137/353 (38%), Positives = 180/353 (50%), Gaps = 62/353 (17%)
Query: 22 EAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY---AAQ 78
+++W L D YP RP E DC++Y RTG CGYGS CRFNHP A
Sbjct: 31 DSLWPLGSRDRDS---------YPERPDEADCIYYLRTGFCGYGSRCRFNHPRERTPALG 81
Query: 79 GAQYR-EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQD 136
G++ E PER GQP C YY++TG CK+G++CKYHHP+ G+ PVS N G P+R
Sbjct: 82 GSRPGGREYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPG 141
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLG-------TALPLTGNASLGSMGSSVL-PS- 187
EK C YY++ G CKFG CKFHHP+P+ L P+ G S+ V PS
Sbjct: 142 EKECSYYLKNGQCKFGATCKFHHPEPAGLQFPAPSPVQVAPIAGQVPAPSVYPPVQSPSA 201
Query: 188 -SGLQYA-------------------------GIVPAPGWNTYMGNIGPLSPTSI---AG 218
S QY G+V P W+ Y + P++ S G
Sbjct: 202 HSSQQYGVILARPSLLSNPYVPGPYGPMLVSPGVVQFPSWSPYPAPMSPVASPSAQPSVG 261
Query: 219 SNLIY-----SSRNQGDLGAGAQMHILSASS-----QNLPERPDQPDCRYYMNTGTCKYG 268
S +Y S G G+ M SS + PERP QP+C+YYM TG CK+G
Sbjct: 262 SGPLYGMAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPGQPECQYYMRTGDCKFG 321
Query: 269 ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+ C++HHP E + + + LGLP RPG C+++ G+CKFGP C+FDH
Sbjct: 322 SSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQRGMCKFGPACKFDH 374
Score = 85.1 bits (209), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ PER QP C+YYM TG CK+GA CK+HHP++ + ++ G P RPG+ CS
Sbjct: 88 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 147
Query: 305 YSMYGICKFGPTCRFDHP 322
Y G CKFG TC+F HP
Sbjct: 148 YLKNGQCKFGATCKFHHP 165
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ PERPD+ DC YY+ TG C YG+ C+F+HP+ER S G P R GQ +C Y
Sbjct: 43 SYPERPDEADCIYYLRTGFCGYGSRCRFNHPRERTPALGGSRPGGREYPERIGQPVCQYY 102
Query: 306 SMYGICKFGPTCRFDHP 322
G+CKFG +C++ HP
Sbjct: 103 MRTGMCKFGASCKYHHP 119
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +GS+CR++HP + LP R G P C +++
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFM 359
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ H DR P + ++ +P+
Sbjct: 360 QRGMCKFGPACKFDHSMDRLSYSPSASSLADMPV 393
>gi|334188594|ref|NP_001190604.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
gi|332010342|gb|AED97725.1| zinc finger CCCH domain-containing protein 67 [Arabidopsis
thaliana]
Length = 451
Score = 232 bits (591), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 133/364 (36%), Positives = 181/364 (49%), Gaps = 60/364 (16%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V + + A++ + +EG YP RP DC FY RTG C YGS+C+F
Sbjct: 65 SVPQGNVETDSRALFGSDQKEEEEGSEKRMMMVYPVRPDSEDCSFYMRTGSCKYGSSCKF 124
Query: 71 NHPAY-------------AAQGAQY--REELPERNGQPD------CGYYLKTGTCKYGST 109
NHP G +Y RE + ER+ + C YY +TG CKYG +
Sbjct: 125 NHPVRRKLQDLKFLGSMRTRNGKEYIGRERVRERDEDVENPKLMECKYYFRTGGCKYGES 184
Query: 110 CKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG-T 167
C++ H K+ N V N LGLP+R EK CP+YMR GSCKFG CKF+HP P+++G
Sbjct: 185 CRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMRNGSCKFGSDCKFNHPDPTAIGGV 244
Query: 168 ALPLTGNASLGSMG-----------------------SSVLPSSGLQYAGIVP-APGWNT 203
PL + GS + +PS G+ P A WN
Sbjct: 245 DSPLYRGNNGGSFSPKAPSQASSTSWSSTRHMNGTGTAPFIPSMFPHSRGVTPQASDWNG 304
Query: 204 YMGNIG------PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 257
Y + PL+P+S +N + + + + S + PERPDQP+C
Sbjct: 305 YQASSAYPPERSPLAPSSYQVNNSLAET-------SSFSQYQHQMSVEEFPERPDQPECT 357
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 317
YY+ TG CK+ CK+HHPK R+ + AA + GLP RP Q++C++YS YGICKFGP C
Sbjct: 358 YYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTHYSRYGICKFGPAC 417
Query: 318 RFDH 321
RFDH
Sbjct: 418 RFDH 421
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 85/195 (43%), Gaps = 53/195 (27%)
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
++ P+R D + C +YMRTGSCK+G +CKF+HP L LGSM +
Sbjct: 95 MMVYPVRPDSEDCSFYMRTGSCKYGSSCKFNHP------VRRKLQDLKFLGSMRTR---- 144
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL 247
+G +Y G + +++
Sbjct: 145 NGKEYIG------------------------------------------RERVRERDEDV 162
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
E P +C+YY TG CKYG C+F H KE + ++ + LGLP RPG+ C Y
Sbjct: 163 -ENPKLMECKYYFRTGGCKYGESCRFSHMKEHNSPASVPELNFLGLPIRPGEKECPFYMR 221
Query: 308 YGICKFGPTCRFDHP 322
G CKFG C+F+HP
Sbjct: 222 NGSCKFGSDCKFNHP 236
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/83 (54%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R SFN GLP+R D+ C +
Sbjct: 345 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAAFSFNDKGLPLRPDQSMCTH 404
Query: 143 YMRTGSCKFGVACKFHHPQPSSL 165
Y R G CKFG AC+F H P +
Sbjct: 405 YSRYGICKFGPACRFDHSIPPTF 427
>gi|297816042|ref|XP_002875904.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297321742|gb|EFH52163.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 447
Score = 231 bits (588), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 131/327 (40%), Positives = 170/327 (51%), Gaps = 46/327 (14%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQ-----YREELP 87
E + + YP RPG DC FY RTG C +GS+C+FNHP A Q A+ +EE
Sbjct: 97 ENESEMRETVYPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKIQIARDNKVREKEEDG 156
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHH--PKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
+ G DC YY +TG CKYG TC+++H PK + P N LGLP+R E CPYYMR
Sbjct: 157 GKLGLIDCKYYFRTGGCKYGETCRFNHTLPKSCLASAP-ELNFLGLPIRPGEVECPYYMR 215
Query: 146 TGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI---------- 195
GSCKFG CKF+HP P+++G L+ + + G + P S Q +
Sbjct: 216 NGSCKFGAECKFNHPDPTTIGGTDSLSFHGNNGVSIGTFSPKSAFQASSTSWTSPRHVNG 275
Query: 196 --------------VPA--PGWNTYMGNI-----GPLSPTSIAGSNLIYSSRNQGDLGAG 234
VP+ P WN Y ++ G SP++ Y N +
Sbjct: 276 TSPFIPVMLSQTHGVPSQTPEWNGYQASVYSSERGLFSPSTT------YLMNNLSAETSM 329
Query: 235 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 294
+ ++ PERPDQPDC YYM TG CK+ +CK+HHPK R+ + + GLP
Sbjct: 330 LSQYRHQMPAEEFPERPDQPDCSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLP 389
Query: 295 SRPGQAICSNYSMYGICKFGPTCRFDH 321
RP Q IC+ YS YGICKFGP CRFDH
Sbjct: 390 LRPDQNICTYYSRYGICKFGPACRFDH 416
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 314
DC+YY TG CKYG C+F+H + ++A + LGLP RPG+ C Y G CKFG
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTLPKSCLASAPELNFLGLPIRPGEVECPYYMRNGSCKFG 222
Query: 315 PTCRFDHP 322
C+F+HP
Sbjct: 223 AECKFNHP 230
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
P RPG CS Y G CKFG +C+F+HP A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
>gi|449487726|ref|XP_004157770.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 171/322 (53%), Gaps = 46/322 (14%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELP 87
++G +++ YP RP DC FY +TG C +GS C+FNHP ++ +Y ++
Sbjct: 125 RKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDST 184
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRT 146
+ +C +YL+TG CK+G+ C+Y+H + R P+ N LGLP+R DEK CPYYMRT
Sbjct: 185 GTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRT 244
Query: 147 GSCKFGVACKFHHPQPSSLGTALPLTG--------NASLGSMGSSVLPSSGLQYAGIVPA 198
GSCK+G CKF+HP P+++ + L+G AS + S P + VPA
Sbjct: 245 GSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRVLNEATTFVPA 304
Query: 199 -------PGWNTYMG-----NIGPLSP-----TSIAGSNLIYSSRNQGDLGAGAQMHILS 241
WN Y IG L P SIA +YSS Q D
Sbjct: 305 MISPSQDQDWNGYQAPIYPSEIGVLPPPAYVVNSIAPETDLYSSHQQVD----------- 353
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 301
PERP QP+C Y++ TG CK+ + CK+HHPK R + + GLP RP Q +
Sbjct: 354 ----EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNV 409
Query: 302 CSNYSMYGICKFGPTCRFDHPY 323
C+ Y YGICKFGP+C+FDHP+
Sbjct: 410 CTYYRRYGICKFGPSCKFDHPF 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKS 139
Q +E PER GQP+C Y+LKTG CK+ S CKYHHPK+RN P + N GLP+R D+
Sbjct: 350 QQVDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNV 409
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 194
C YY R G CKFG +CKF HP S T L G+ + + G + AG
Sbjct: 410 CTYYRRYGICKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFST----AEGAEMAG 460
>gi|307136126|gb|ADN33972.1| nucleic acid binding protein [Cucumis melo subsp. melo]
Length = 475
Score = 230 bits (586), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 124/322 (38%), Positives = 172/322 (53%), Gaps = 46/322 (14%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELP 87
++G +++ YP RP DC FY +TG C +GS C+FNHP ++ +Y ++
Sbjct: 127 RKGDWRGKSNQYPVRPEAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYDDDSA 186
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRT 146
+ +C +YL+TG CK+G+ C+Y+H + R P+ N LGLP+R DEK CPYYMRT
Sbjct: 187 GTANKTECKFYLRTGGCKFGNACRYNHTRSRALTSPILELNFLGLPIRPDEKECPYYMRT 246
Query: 147 GSCKFGVACKFHHPQPSSLGTALPLTG--------NASLGSMGSSVLPSSGLQYAGIVPA 198
GSCK+G CKF+HP P+++ + L+G AS + S P + VPA
Sbjct: 247 GSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRVLNEATTFVPA 306
Query: 199 -------PGWNTYMGNIGP-----LSP-----TSIAGSNLIYSSRNQGDLGAGAQMHILS 241
WN Y I P L P +IA +YSS Q D
Sbjct: 307 MISPSQDSEWNGYQAPIYPSEISVLPPPPYVVNNIAPEADLYSSHQQVD----------- 355
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 301
PERP QP+C Y++ TG CK+ + CK+HHPK R + + GLP RP Q +
Sbjct: 356 ----EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNV 411
Query: 302 CSNYSMYGICKFGPTCRFDHPY 323
C+ YS YGICKFGP+C+FDHP+
Sbjct: 412 CTYYSRYGICKFGPSCKFDHPF 433
>gi|413951532|gb|AFW84181.1| hypothetical protein ZEAMMB73_594165 [Zea mays]
Length = 375
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 137/334 (41%), Positives = 174/334 (52%), Gaps = 54/334 (16%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ ++ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 46 EEGMWQQMAMNS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 102
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQD 136
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+
Sbjct: 103 ASARMKGEYPERVGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPL--- 159
Query: 137 EKSCPYYMRT-GSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI 195
P Y T S F A P+ S P+ V+P G+
Sbjct: 160 ---LPSYTGTMSSWTFPRASFIPSPRWQSPSNYAPM------------VVPH------GL 198
Query: 196 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN--------- 246
V P WN+Y G + G+ Y S QG+ AG Q + S +
Sbjct: 199 VQVPSWNSYPGQL------QSPGAQQTYGSSQQGEASAGNQGMLSPYRSSSFPVPQYALQ 252
Query: 247 ----LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 302
PERPD+P+C+YYM TG CK+GA CKFHHP+ R + P+GLP RPG+ +C
Sbjct: 253 RDNVFPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELC 312
Query: 303 SNYSMYGICKFGPTCRFDHPYAGYPIN---YGLS 333
YS YGICKFG C+FDHP P+ YG S
Sbjct: 313 KFYSRYGICKFGANCKFDHPTMAAPMGVYAYGFS 346
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RP EP+C +Y +TG C +G+ C+F+HP +Q LP R G+ C +Y
Sbjct: 257 FPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSQPPPDCVLSPMGLPIRPGEELCKFYS 316
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILG 130
+ G CK+G+ CK+ HP G ++ G
Sbjct: 317 RYGICKFGANCKFDHPTMAAPMGVYAYGFSG 347
>gi|449469596|ref|XP_004152505.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Cucumis sativus]
Length = 473
Score = 228 bits (582), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 122/322 (37%), Positives = 172/322 (53%), Gaps = 46/322 (14%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-----YAAQGAQYREELP 87
++G +++ YP RP DC FY +TG C +GS C+FNHP ++ +Y ++
Sbjct: 125 RKGDWRGKSNQYPVRPDAEDCAFYLKTGTCKFGSFCKFNHPVRKKNQVVSEKLKYEDDST 184
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRT 146
+ +C +YL+TG CK+G+ C+Y+H + R P+ N LGLP+R DEK CPYYMRT
Sbjct: 185 GTANRTECKFYLRTGGCKFGNACRYNHTRPRALTSPILELNFLGLPIRPDEKECPYYMRT 244
Query: 147 GSCKFGVACKFHHPQPSSLGTALPLTG--------NASLGSMGSSVLPSSGLQYAGIVPA 198
GSCK+G CKF+HP P+++ + L+G AS + S P + VPA
Sbjct: 245 GSCKYGANCKFNHPDPTTVAGSESLSGYNNGVPLQGASQSQITSWTSPRVLNEATTFVPA 304
Query: 199 -------PGWNTYMGNIGP-----LSPTSIAGSNL-----IYSSRNQGDLGAGAQMHILS 241
WN Y I P L P + +N+ +YSS Q D
Sbjct: 305 MISPSQDQDWNGYQAPIYPSEISVLPPPAYVVNNIAPETDLYSSHQQVD----------- 353
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 301
PERP QP+C Y++ TG CK+ + CK+HHPK R + + GLP RP Q +
Sbjct: 354 ----EYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNV 409
Query: 302 CSNYSMYGICKFGPTCRFDHPY 323
C+ Y YGICKFGP+C+FDHP+
Sbjct: 410 CTYYRRYGICKFGPSCKFDHPF 431
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKS 139
Q +E PER GQP+C Y+LKTG CK+ S CKYHHPK+RN P + N GLP+R D+
Sbjct: 350 QQVDEYPERPGQPECSYFLKTGDCKFKSLCKYHHPKNRNPKLPTCTLNDKGLPLRPDQNV 409
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 194
C YY R G CKFG +CKF HP S T L G+ + + G + AG
Sbjct: 410 CTYYRRYGICKFGPSCKFDHPFLPSSSTVGELEQQPHYGNFST----AEGAEMAG 460
>gi|356513852|ref|XP_003525622.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 490
Score = 228 bits (581), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 125/329 (37%), Positives = 173/329 (52%), Gaps = 36/329 (10%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQYREELP 87
+EG YP RP DC FY +TG C +G NC+FNHP + A REE
Sbjct: 129 KEGRNSGGTHHYPLRPEAEDCAFYMKTGNCKFGFNCKFNHPIKRKSQAVKEKAGEREETT 188
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNILGLPMRQDEKSCPYYM 144
ER+G +C YY ++G CK+G +CKY+H + + P + N LGLP+R E+ CPYYM
Sbjct: 189 ERSGMTECKYYQRSGGCKFGKSCKYNHTRGKISTAPAPLLELNFLGLPIRPGERECPYYM 248
Query: 145 RTGSCKFGVACKFHHPQPSSL-------------GTALPLTGNASLGSMGSSVLPSSGLQ 191
RTGSCKFG CKF+HP P+++ G ++ L G S S+ S P + +
Sbjct: 249 RTGSCKFGANCKFNHPDPTAVGGGGGNPPSGYGNGGSISLQG-VSQTSVPSWSSPRTLNE 307
Query: 192 YAGIVP------------APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHI 239
+ VP + WN Y ++ L SI + + D H
Sbjct: 308 ASPFVPMMLSPTQGVSTQSSDWNGYQASVY-LPERSIHPPSTFVMNNPAIDTNV-YMHHQ 365
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ 299
PERP +P+C +++ TG CK+ ++CKFHHPK R+ + N+ GLP RP Q
Sbjct: 366 KQMPVDEFPERPGEPECSFFLKTGDCKFKSNCKFHHPKNRVTRLPPCNLSDKGLPLRPDQ 425
Query: 300 AICSNYSMYGICKFGPTCRFDHPYAGYPI 328
++CS+YS YGICKFGP C+FDHP P+
Sbjct: 426 SVCSHYSRYGICKFGPACKFDHPINLQPV 454
>gi|15228379|ref|NP_190414.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
gi|62901491|sp|Q9STM4.1|C3H43_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=AtC3H43; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 6
gi|4678344|emb|CAB41154.1| putative protein [Arabidopsis thaliana]
gi|194272236|gb|ACF37203.1| At3g48440 [Arabidopsis thaliana]
gi|332644896|gb|AEE78417.1| zinc finger CCCH domain-containing protein 43 [Arabidopsis
thaliana]
Length = 448
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/316 (41%), Positives = 173/316 (54%), Gaps = 43/316 (13%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPE--RNGQPDCGY 97
YP RPG DC FY RTG C +GS+C+FNHP A+ + RE+ + + G DC Y
Sbjct: 107 YPVRPGAEDCSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKY 166
Query: 98 YLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
Y +TG CKYG TC+++H ++G A N LGLP+R E CPYYMR GSCK+G CK
Sbjct: 167 YFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECK 226
Query: 157 FHHPQPSSLG-TALP-LTGN--ASLGSMG---------------------SSVLPSSGLQ 191
F+HP P+++G T P GN S+G+ S +P Q
Sbjct: 227 FNHPDPTTIGGTDSPSFRGNNGVSIGTFSPKATFQASSTSWSSPRHVNGTSPFIPVMLSQ 286
Query: 192 YAGIVPA-PGWNTYMGNI-----GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ 245
G+ P WN Y ++ G SP++ + L+ +S + + H + A +
Sbjct: 287 THGVTSQNPEWNGYQASVYSSERGVFSPST---TYLMNNSSAETSMLLSQYRHQMPA--E 341
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
PERPDQP+C YYM TG CK+ +CK+HHPK R+ + + GLP RP Q IC+ Y
Sbjct: 342 EFPERPDQPECSYYMKTGDCKFKFNCKYHHPKNRLPKLPPYALNDKGLPLRPDQNICTYY 401
Query: 306 SMYGICKFGPTCRFDH 321
S YGICKFGP CRFDH
Sbjct: 402 SRYGICKFGPACRFDH 417
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 314
DC+YY TG CKYG C+F+H + ++A + LGLP RPG+ C Y G CK+G
Sbjct: 163 DCKYYFRTGGCKYGETCRFNHTIPKSGLASAPELNFLGLPLRPGEVECPYYMRNGSCKYG 222
Query: 315 PTCRFDHP 322
C+F+HP
Sbjct: 223 AECKFNHP 230
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
P RPG CS Y G CKFG +C+F+HP A
Sbjct: 108 PVRPGAEDCSFYMRTGSCKFGSSCKFNHPLA 138
>gi|356507323|ref|XP_003522417.1| PREDICTED: zinc finger CCCH domain-containing protein 43-like
[Glycine max]
Length = 570
Score = 227 bits (579), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 125/321 (38%), Positives = 168/321 (52%), Gaps = 48/321 (14%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQYREELPERNGQP 93
+A YP RP DC FY +TG C +G NC+FNHP + A REE ER+GQ
Sbjct: 225 GRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRRKNQAKKENAGEREEQAERSGQM 284
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFG 152
+C YYL++G CK+G CK++H + ++ A N LGLP+R EK C YYMRTGSCKFG
Sbjct: 285 ECKYYLRSGGCKFGKACKFNHTRGKSSSASATELNFLGLPIRVGEKECLYYMRTGSCKFG 344
Query: 153 VACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL---------------QYAGIVP 197
C+F+HP P+++G G++ G S + G+ + A VP
Sbjct: 345 ANCRFNHPDPTTVGG-----GDSPSGYGNGSSISLQGVSQSSISSWSSTRPLNESAPFVP 399
Query: 198 A-----PG-------WNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLGAGAQMHILS 241
PG WN Y +P ++ +L Y N H
Sbjct: 400 VILSPNPGVSPQSSEWNGYQ------APVYLSERSLHPPSTYVMNNPAMESNVYMHHQKQ 453
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 301
+ PERP +P+C Y++ TG CK+ ++CKFHHPK RIA+ N+ GLP RP Q +
Sbjct: 454 MLVEEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNV 513
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C+ Y YGICKFGP C+FDHP
Sbjct: 514 CTYYRRYGICKFGPACKFDHP 534
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 46/83 (55%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPY 142
EE PER G+P+C Y+LKTG CK+ S CK+HHPK+R P+ + + GLP+R D+ C Y
Sbjct: 457 EEFPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTY 516
Query: 143 YMRTGSCKFGVACKFHHPQPSSL 165
Y R G CKFG ACKF HP PS++
Sbjct: 517 YRRYGICKFGPACKFDHPAPSTM 539
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 55/103 (53%), Gaps = 2/103 (1%)
Query: 220 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
N S + GD+ G + S +Q P RP+ DC +Y+ TGTCK+G +CKF+HP R
Sbjct: 204 NESESDKVGGDV-EGVKGERSSGRAQQYPLRPEAEDCAFYLKTGTCKFGFNCKFNHPLRR 262
Query: 280 IAQSAASNIGPLGLPS-RPGQAICSNYSMYGICKFGPTCRFDH 321
Q+ N G + R GQ C Y G CKFG C+F+H
Sbjct: 263 KNQAKKENAGEREEQAERSGQMECKYYLRSGGCKFGKACKFNH 305
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 4/83 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEP+C ++ +TG C + SNC+F+HP A + LP R Q C YY
Sbjct: 459 FPERPGEPECSYFLKTGDCKFKSNCKFHHPKNRIARLPLCNLSDKGLPLRPDQNVCTYYR 518
Query: 100 KTGTCKYGSTCKYHHPKDRNGAG 122
+ G CK+G CK+ HP AG
Sbjct: 519 RYGICKFGPACKFDHPAPSTMAG 541
>gi|57900443|dbj|BAD87736.1| putative zinc finger protein [Oryza sativa Japonica Group]
Length = 322
Score = 224 bits (572), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 127/290 (43%), Positives = 161/290 (55%), Gaps = 46/290 (15%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYY 143
E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N LG P+R EK C YY
Sbjct: 4 EYPERMGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYY 63
Query: 144 MRTGSCKFGVACKFHHPQ-----PSSLGTAL------------PLTGN-ASLGSMGSSVL 185
++TG CK+G CKFHHP+ SS G+ + P TG AS S +
Sbjct: 64 LKTGQCKYGNTCKFHHPELFNAMASSRGSPIYPSVHSSATAGPPYTGTMASWAFPRGSFI 123
Query: 186 PSSGLQ----YA------GIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYSSRNQGDL 231
PS Q YA G+V P WN+Y G + P+S + G+ Y + Q D
Sbjct: 124 PSPRWQNPSNYAPMIVPQGLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDA 183
Query: 232 GAGAQMHILSASSQN-------------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
AG Q + S + PERPDQP+C+YYM TG CK+GA CKFHHP+
Sbjct: 184 SAGNQGMLSPYRSSSYPVPQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRV 243
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
R + + P+GLP RPG+ +C YS YGICKFG C+FDHP P+
Sbjct: 244 RSMPTPDCVLSPVGLPLRPGEELCKFYSRYGICKFGANCKFDHPTMAPPM 293
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 12/114 (10%)
Query: 73 PAYAAQGAQYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILG 130
P YA Q RE + PER QP+C YY+KTG CK+G+ CK+HHP+ R+ P + +G
Sbjct: 202 PQYALQ----RENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVG 257
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 184
LP+R E+ C +Y R G CKFG CKF HP T P G + GS ++V
Sbjct: 258 LPLRPGEELCKFYSRYGICKFGANCKFDHP------TMAPPMGVYAYGSASTNV 305
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
P RPGE C FY R G+C +G+NC+F+HP A
Sbjct: 259 PLRPGEELCKFYSRYGICKFGANCKFDHPTMA 290
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 28 KIHDNQEGGGVA-----QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K H +E G+A YP RP E +C +Y +TG C YG+ C+F+HP
Sbjct: 30 KFHHPREKAGIAGRVQLNTLGYPLRPSEKECAYYLKTGQCKYGNTCKFHHP 80
>gi|224119564|ref|XP_002318105.1| predicted protein [Populus trichocarpa]
gi|222858778|gb|EEE96325.1| predicted protein [Populus trichocarpa]
Length = 477
Score = 224 bits (570), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 131/347 (37%), Positives = 177/347 (51%), Gaps = 53/347 (15%)
Query: 18 DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
D++E R +N G Q YP RP DC FY +TG C +G+NC+FNHP
Sbjct: 100 DDLENKNERSNDIENNNSSGYHQ---YPVRPEAEDCAFYMKTGTCKFGANCKFNHPLRRK 156
Query: 78 QGAQY--------REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV----- 124
Q REE E+ +C YYLKTG CKYG+ C+++H + + PV
Sbjct: 157 NQVQLTVKEKTKEREEATEKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMS 216
Query: 125 ---SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG----TALPLTGNASL 177
N LGLP+R EK C Y+MR GSCKFG CK++HP P+++G + L G ++
Sbjct: 217 PALELNFLGLPIRLGEKECEYFMRNGSCKFGANCKYNHPDPTAVGGSDHPSTFLNGGSAS 276
Query: 178 GSMG-----------------SSVLPSSGLQYAGIVP-APGWNTYMGNIGPLS-----PT 214
+ +S +P G+ P +P WN Y + P P
Sbjct: 277 LPVPSSSSVGSWSSPRALNDPTSFVPIMFSPNQGVPPQSPDWNGYQAPLYPPERSLHPPL 336
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
S A N+ S ++ A Q I+ PERP QP C +YM G CK+ ++CK+H
Sbjct: 337 SYALINIATES----NVYAPQQQQIVV---DEFPERPGQPQCSFYMKFGDCKFKSNCKYH 389
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
HPK RI++S + GLP RP Q ICS+YS YGICKFGP+C+FDH
Sbjct: 390 HPKNRISKSPPLTLSDKGLPLRPDQNICSHYSRYGICKFGPSCKFDH 436
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHH-------PKERIAQSAASNIGPLGLPSRPGQAI 301
E+P +C+YY+ TG CKYG C+F+H P +I S A + LGLP R G+
Sbjct: 175 EKPSLIECKYYLKTGGCKYGTACRFNHSRAKYSVPPVKIPMSPALELNFLGLPIRLGEKE 234
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C + G CKFG C+++HP
Sbjct: 235 CEYFMRNGSCKFGANCKYNHP 255
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 26/52 (50%), Gaps = 5/52 (9%)
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSL 344
P RPGQ CS Y +G CKF C++ HP N PPL++ D L
Sbjct: 362 FPERPGQPQCSFYMKFGDCKFKSNCKYHHPK-----NRISKSPPLTLSDKGL 408
>gi|115435758|ref|NP_001042637.1| Os01g0258700 [Oryza sativa Japonica Group]
gi|62901411|sp|Q5NAW2.2|C3H6_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 6;
Short=OsC3H6; AltName: Full=Zinc finger CCCH
domain-containing protein ZFN-like 1
gi|56783964|dbj|BAD81401.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
gi|113532168|dbj|BAF04551.1| Os01g0258700 [Oryza sativa Japonica Group]
Length = 476
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 182/342 (53%), Gaps = 49/342 (14%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQPDCGY 97
P RPGE DC++Y RTG CG+G CR+NHP GA+ L PER GQP C Y
Sbjct: 57 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 116
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
Y+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM+TG CKFG CKF
Sbjct: 117 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKF 176
Query: 158 HHPQ----PSSLGTALPLTG--------NASLGS--MG------SSVLPSS---GLQYAG 194
HHP+ P + G PL ASL + MG S +P S + +G
Sbjct: 177 HHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPGSYTPMMLSSG 236
Query: 195 IVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSASSQN 246
++P GW+ Y ++ P+ + A N+ +Y + G G + S++ Q+
Sbjct: 237 MIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQS 295
Query: 247 --------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG
Sbjct: 296 SNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPG 355
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 356 AQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 395
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 304 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 363
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 364 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 397
>gi|56783965|dbj|BAD81402.1| putative floral homeotic protein HUA1 [Oryza sativa Japonica Group]
Length = 447
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 182/342 (53%), Gaps = 49/342 (14%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQPDCGY 97
P RPGE DC++Y RTG CG+G CR+NHP GA+ L PER GQP C Y
Sbjct: 28 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 87
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
Y+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM+TG CKFG CKF
Sbjct: 88 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKF 147
Query: 158 HHPQ----PSSLGTALPLTG--------NASLGS--MG------SSVLPSS---GLQYAG 194
HHP+ P + G PL ASL + MG S +P S + +G
Sbjct: 148 HHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPGSYTPMMLSSG 207
Query: 195 IVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSASSQN 246
++P GW+ Y ++ P+ + A N+ +Y + G G + S++ Q+
Sbjct: 208 MIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQS 266
Query: 247 --------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG
Sbjct: 267 SNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPG 326
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 327 AQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 366
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 275 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 334
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 335 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 368
>gi|215767117|dbj|BAG99345.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 464
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 138/342 (40%), Positives = 182/342 (53%), Gaps = 49/342 (14%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQPDCGY 97
P RPGE DC++Y RTG CG+G CR+NHP GA+ L PER GQP C Y
Sbjct: 45 PERPGEEDCVYYLRTGACGFGDRCRYNHPRDRGGTEFGGGARNAAALDYPERAGQPICEY 104
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
Y+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM+TG CKFG CKF
Sbjct: 105 YMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYMKTGQCKFGTTCKF 164
Query: 158 HHPQ----PSSLGTALPLTG--------NASLGS--MG------SSVLPSS---GLQYAG 194
HHP+ P + G PL ASL + MG S +P S + +G
Sbjct: 165 HHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSYIPGSYTPMMLSSG 224
Query: 195 IVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----AGAQMHILSASSQN 246
++P GW+ Y ++ P+ + A N+ +Y + G G + S++ Q+
Sbjct: 225 MIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYGGPYVPYASSTGQS 283
Query: 247 --------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG
Sbjct: 284 SNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPG 343
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 344 AQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 383
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 292 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 351
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 352 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 385
>gi|297793917|ref|XP_002864843.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297310678|gb|EFH41102.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 122/311 (39%), Positives = 163/311 (52%), Gaps = 36/311 (11%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREELPERNGQPDCGYY 98
YP RP DC FY RTG C YGS+C+FNHP + + R+E E +C YY
Sbjct: 97 YPVRPDAEDCSFYMRTGSCKYGSSCKFNHPLRKKLQIGREKVRERDEDVENPKLMECKYY 156
Query: 99 LKTGTCKYGSTCKYHHPKDRN--GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
+TG CKYG +C++ H K+ +GP N LGLP+R EK CP+YMR GSCKFG CK
Sbjct: 157 FRTGGCKYGESCRFSHMKEHTSLASGP-DLNFLGLPIRPGEKECPFYMRNGSCKFGSDCK 215
Query: 157 FHHPQPSSLG----------TALPLTGNASL--------------GSMGSSVLPSSGLQY 192
F+HP P+++G P + A G+ + +P+
Sbjct: 216 FNHPDPTAIGGVDSPLFRGNNGGPFSPKAPSQASSTSWSSTRHINGTGTAPFIPAMFPHN 275
Query: 193 AGIVP-APGWNTYMGNIG-PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 250
G+ P A WN Y + P + +A S Y N + + + PER
Sbjct: 276 RGVSPQASEWNGYQASSAYPPERSVLAPS--TYPVNNSLAETSSFSQYQHQMPGEEFPER 333
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 310
PDQP+C YY+ TG CK+ CK+HHPK R+ + A + GLP RP Q++C++YS YGI
Sbjct: 334 PDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAPFSFNDKGLPLRPDQSMCTHYSRYGI 393
Query: 311 CKFGPTCRFDH 321
CKFGP CRFDH
Sbjct: 394 CKFGPACRFDH 404
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 58/96 (60%), Gaps = 1/96 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPY 142
EE PER QP+C YYLKTG CK+ CKYHHPK+R P SFN GLP+R D+ C +
Sbjct: 328 EEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAPFSFNDKGLPLRPDQSMCTH 387
Query: 143 YMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
Y R G CKFG AC+F H P + + T A G
Sbjct: 388 YSRYGICKFGPACRFDHSIPPTFSPSSSQTVEAPQG 423
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 45/74 (60%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
E P +C+YY TG CKYG C+F H KE + ++ ++ LGLP RPG+ C Y
Sbjct: 146 ENPKLMECKYYFRTGGCKYGESCRFSHMKEHTSLASGPDLNFLGLPIRPGEKECPFYMRN 205
Query: 309 GICKFGPTCRFDHP 322
G CKFG C+F+HP
Sbjct: 206 GSCKFGSDCKFNHP 219
>gi|326504076|dbj|BAK02824.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 470
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 138/400 (34%), Positives = 196/400 (49%), Gaps = 51/400 (12%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----A 74
+E ++WR+ + + G G P RP + DC++Y RTG CG+G CR+NHP
Sbjct: 28 LEGSMWRMGLAGDGGGEGDGAR--LPERPDQADCIYYLRTGACGFGDRCRYNHPRDRGGT 85
Query: 75 YAAQGAQYREEL--PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
GA+ L PER GQP C YY+KTGTCK+GS CKYHHPK PV N G P
Sbjct: 86 EFGGGAKNAVALDYPERLGQPVCEYYMKTGTCKFGSNCKYHHPKQDGSVQPVMLNSNGFP 145
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTG-------------NA 175
+R EK C YYM+TG CKFG CKFHHP+ P + G PL N
Sbjct: 146 LRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGVPVTPGIYPPLQSSTVSSPHPYAPLTNW 205
Query: 176 SLGS---MGSSVLPSS---GLQYAGIVPAPGWNTYMGNIGPLS---PTSIAGSNLIYSSR 226
+G + S +P S + +G++P GW+ Y ++ P++ + +Y
Sbjct: 206 QMGRPPVVPGSYMPGSYTPMMLSSGMIPLQGWSPYPASVNPVASGGAQQTVQAGHMYGIG 265
Query: 227 NQGDLG----AGAQMHILSASSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFH 274
+ G G M S++ Q+ PERP QP+C+YYM TG CK+GA CK+H
Sbjct: 266 HHGSSSTIAYGGPYMPYSSSTIQSSNNQQEHGFPERPGQPECQYYMRTGDCKFGATCKYH 325
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 334
HP++ + + P LP RPG CS Y+ G C++G C++DHP G S
Sbjct: 326 HPRDWSSPKSNYMFSPFCLPLRPGAQPCSYYAQNGYCRYGVACKYDHPMG----TLGYSS 381
Query: 335 PPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSD 374
P + D + + + ++ S + P ++ D
Sbjct: 382 SPFPLSDVPIAPYPLGFSIATLAPSSSSPDLRPEYISAKD 421
>gi|357129792|ref|XP_003566545.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like
[Brachypodium distachyon]
Length = 478
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 140/368 (38%), Positives = 185/368 (50%), Gaps = 52/368 (14%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREEL--PERNGQP 93
A+ P RP E DC++Y RTG CG+G CR+NHP GA+ L PER GQP
Sbjct: 57 AARLPERPDEADCIYYLRTGACGFGDRCRYNHPRDRGGTEFGGGAKNAVVLDYPERLGQP 116
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGV 153
C YY+KTGTCK+GS CKYHHPK PV N G P+R EK C YYM+TG CKFG
Sbjct: 117 VCEYYMKTGTCKFGSNCKYHHPKQDGSVLPVMLNNSGFPLRPGEKECSYYMKTGQCKFGS 176
Query: 154 ACKFHHPQ----PSSLGTALPLTGN-------ASLGS--MGS-SVLPSSGL--QYA---- 193
CKFHHP+ P + G PL + ASL + MG V+P S + YA
Sbjct: 177 TCKFHHPEFGGFPVTPGIYPPLQSSVPSPHPYASLANWQMGRPPVVPGSYMPGSYAPMML 236
Query: 194 --GIVPAPGWNTYMGNIGPLS---PTSIAGSNLIYSSRNQGDLGAGA------------Q 236
G++P GW ++ + P++ P + +Y + G A
Sbjct: 237 SSGMIPLQGW-SFRAAVNPVASGGPQQTVQAGPVYGIGHHGSSSTIAYGGPYMPYSSSTI 295
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR 296
S PERP QP+C+YYM TG CK+GA CK+HHP++ + + P LP R
Sbjct: 296 QSSHSQQEHGFPERPGQPECQYYMRTGDCKFGATCKYHHPRDWSSPKSNYVFSPFCLPLR 355
Query: 297 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQ---AISAT 353
PG CS Y+ G C++G C++DHP G S PL + D + + +I+
Sbjct: 356 PGAQPCSYYAQNGYCRYGVACKYDHPMG----TLGYSSSPLPLSDMPIAPYPLGFSIATL 411
Query: 354 HSIETSPD 361
+SPD
Sbjct: 412 APSSSSPD 419
>gi|356500274|ref|XP_003518958.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
[Glycine max]
Length = 339
Score = 215 bits (547), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 134/327 (40%), Positives = 179/327 (54%), Gaps = 65/327 (19%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYA 76
+EE++W L + GGV YP RPG P+C++Y RTG+CGYG CRFNHP A
Sbjct: 27 LEESMWHLTL------GGVES---YPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAV 77
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPM 133
A + + PER G+P C YYLKTGTCK+G++CK+HHPK NG G +S NI G P+
Sbjct: 78 AAAVRATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLSQAPLNIYGYPL 135
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT--------------------- 172
R EK C YY++TG CKFG++CKFHHPQP+ GT+LP +
Sbjct: 136 RLGEKECSYYLKTGQCKFGISCKFHHPQPA--GTSLPTSAPQFYQQVQSPTVPLPEQYGG 193
Query: 173 GNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSP--------TS 215
+ SL VLP S +Q A G+V PGW+ Y + P LSP TS
Sbjct: 194 ASTSLRVARPPVLPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPVSPVLSPGTQPAVGATS 253
Query: 216 IAGSNLIYS-----SRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
+ G + S +R L + S + PERP +P+C+YY+ TG CK+G
Sbjct: 254 LYGVTQLSSPTSAFARPYTPLSSTTGPSGSSLKDRFFPERPGEPECQYYLRTGDCKFGLA 313
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRP 297
C++HHP++ I A + P+GLP RP
Sbjct: 314 CRYHHPRDHI---VAPLLSPVGLPLRP 337
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R G+ CS Y
Sbjct: 86 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRLGEKECSYY 145
Query: 306 SMYGICKFGPTCRFDHP 322
G CKFG +C+F HP
Sbjct: 146 LKTGQCKFGISCKFHHP 162
>gi|194692174|gb|ACF80171.1| unknown [Zea mays]
gi|414879022|tpg|DAA56153.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 320
Score = 214 bits (544), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 156/294 (53%), Gaps = 51/294 (17%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYY 143
E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R +EK C YY
Sbjct: 4 EYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRPNEKECAYY 63
Query: 144 MRTGSCKFGVACKFHHPQ-----PSSLGTALPLTGNASLGSMG----SSVLPSSGLQYAG 194
++TG CK+ CKFHHP+ PSS G+ + T S S G + +PS A
Sbjct: 64 LKTGHCKYANTCKFHHPELFNVVPSSRGSPI-YTSVHSSASAGPQSYTGTMPSWAFPRAS 122
Query: 195 IVPAP---------------------GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGA 233
+P+P WN+Y G + G+ Y S QG+
Sbjct: 123 FIPSPRWQSPSNYAPMIVPQGLVQMQSWNSYTGQL------QSPGAQQTYGSSQQGEAST 176
Query: 234 GAQMHI------------LSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 280
G Q + + +N+ PERPD+P+C+YYM TG CK+GA CKFHHP+ R
Sbjct: 177 GNQGMLSPYRPSSFPVPQYALQRENVFPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRS 236
Query: 281 AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 334
+ P+GLP RPG+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 237 LPPPDCVLSPMGLPLRPGEELCKFYSRYGICKFGANCKFDHPTVVAPMVYAYGF 290
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 59/93 (63%), Gaps = 6/93 (6%)
Query: 70 FNHPAYAAQGAQYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFN 127
F P YA Q RE + PER +P+C YY+KTG CK+G+ CK+HHP+ R+ P +
Sbjct: 190 FPVPQYALQ----RENVFPERPDEPECQYYMKTGDCKFGAVCKFHHPRVRSLPPPDCVLS 245
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+GLP+R E+ C +Y R G CKFG CKF HP
Sbjct: 246 PMGLPLRPGEELCKFYSRYGICKFGANCKFDHP 278
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 23/33 (69%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
P RPGE C FY R G+C +G+NC+F+HP A
Sbjct: 250 PLRPGEELCKFYSRYGICKFGANCKFDHPTVVA 282
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 5/51 (9%)
Query: 28 KIHDNQEGGGVA-----QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K H +E G+A S YP RP E +C +Y +TG C Y + C+F+HP
Sbjct: 30 KFHHPREKAGIAGRVQLNTSGYPLRPNEKECAYYLKTGHCKYANTCKFHHP 80
>gi|242056895|ref|XP_002457593.1| hypothetical protein SORBIDRAFT_03g009930 [Sorghum bicolor]
gi|241929568|gb|EES02713.1| hypothetical protein SORBIDRAFT_03g009930 [Sorghum bicolor]
Length = 481
Score = 213 bits (542), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 137/350 (39%), Positives = 178/350 (50%), Gaps = 65/350 (18%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA ++ PER GQP C
Sbjct: 69 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QDFPERQGQPVC 126
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG CKFG C
Sbjct: 127 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTC 186
Query: 156 KFHHPQ----PSSLGTALPLTG-----------NASLG---SMGSSVLPSS---GLQYAG 194
KFHHP+ P + G PL N +G ++ S +P S + +G
Sbjct: 187 KFHHPEFGGIPVTPGIYPPLQSASVPSPHTYAPNWQMGRSPAVPGSYIPGSYTPMMLSSG 246
Query: 195 IVPAPGWNTYMGNIGPL---------------------SPTSIA--GSNLIYSSRNQGDL 231
+VP GW+ Y ++ P+ S T+IA G+ L YSS + G
Sbjct: 247 MVPLQGWSPYPASVTPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-STGQS 305
Query: 232 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 291
Q H PERP QP+C+Y+M TG CK+G CK++HP++ A + L
Sbjct: 306 SNNHQEH-------GFPERPGQPECQYFMRTGDCKFGNTCKYNHPRDWSAPKSNYMFSHL 358
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILD 341
LP RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 359 CLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSSSALPLSDMS 406
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 302
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 67 RLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVC 126
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y G CKFG C++ HP
Sbjct: 127 EYYLKTGTCKFGSNCKYHHP 146
>gi|356546492|ref|XP_003541660.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 491
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 132/369 (35%), Positives = 181/369 (49%), Gaps = 67/369 (18%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
++ +EE +W+L + GGG + S YP RP E DC +Y RTG CG+GS CRFNHP
Sbjct: 23 EAQTGLEEPVWQLGM-----GGGAGEES-YPQRPDEVDCTYYLRTGFCGFGSRCRFNHPR 76
Query: 74 --AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG----PVSFN 127
A A + E PER GQP C Y+++T TCK+GS+CKYHHP+ G PVS N
Sbjct: 77 DRAVVAGAERTAGEHPERVGQPVCQYFMRTRTCKFGSSCKYHHPRQAGAGGAAATPVSLN 136
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL---------------------- 165
G P+RQ EK C YY++TG CKFG CKFHHP P+ +
Sbjct: 137 YYGYPLRQGEKECSYYVKTGQCKFGATCKFHHPVPAGIQIPPSPFAPVSPLPVPVPSPLY 196
Query: 166 GTALPLTGNAS--LGSMGSS--VLPSSGLQYA--------GIVPAPGWNTYM----GNIG 209
T P G +S +G + + +LP S +Q +VP GW Y G +
Sbjct: 197 STMQPPPGPSSQQIGVLVARPPMLPGSLVQSPYGPVVLSPAMVPISGWGPYQASASGAVL 256
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSA-----------SSQNLPERPDQPDCRY 258
P S GS +Y A + Q PER +QP+ +Y
Sbjct: 257 PSGTPSNVGSAQLYGITQLPSPAAAYPGPYPPSGSPVGPPSSSQKEQAFPERSNQPEYQY 316
Query: 259 YMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMYGICKF 313
Y+ TG K+G +++ P + ++ + P GLP RPG C++Y+ +G+CKF
Sbjct: 317 YLKTGEVKFGPSYRYNPPPDMSVPDMSTPKANVILSPAGLPLRPGAPACTHYAQHGVCKF 376
Query: 314 GPTCRFDHP 322
G C+FDHP
Sbjct: 377 GSACKFDHP 385
>gi|356554798|ref|XP_003545729.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Glycine max]
Length = 507
Score = 212 bits (540), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 115/330 (34%), Positives = 167/330 (50%), Gaps = 68/330 (20%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE 88
I D +E V + P RPGEPDC ++ +T C +GS C+FNHP +++ A LPE
Sbjct: 179 IPDWKEVPNVVTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSSGLPE 238
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKD------------------------------- 117
R +P C +Y+KTG C+YG+ CK+HHPKD
Sbjct: 239 RPSEPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNSMMGGATGDTQP 298
Query: 118 -RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
++ P N GLP+R E CP+YM+TGSCK+GV+C+++HP +++ N
Sbjct: 299 IKSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRNAI--------NPP 350
Query: 177 LGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQ 236
+ +G+S+LPSS NIG L+P +++ + +G
Sbjct: 351 IAGLGASILPSSAANL--------------NIGLLNP-AVSAYQAFEPRLSNPMVGIAET 395
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER----IAQSAASNIGPLG 292
++ P+RP Q +C +YM TG CK+G CK+HHP +R +++ A + P G
Sbjct: 396 IY---------PQRPGQIECDFYMKTGVCKFGERCKYHHPIDRSALSLSKQATVKLTPAG 446
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP R G IC Y G CKFG TC+FDHP
Sbjct: 447 LPRREGDVICPYYLKTGTCKFGATCKFDHP 476
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 79/168 (47%), Gaps = 47/168 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------------------- 73
P R GE DC FY +TG C YG +CR+NHP
Sbjct: 314 PVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRNAINPPIAGLGASILPSSAANLNIGLLNP 373
Query: 74 ---AYAAQGAQYREEL--------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA- 121
AY A + + P+R GQ +C +Y+KTG CK+G CKYHHP DR+
Sbjct: 374 AVSAYQAFEPRLSNPMVGIAETIYPQRPGQIECDFYMKTGVCKFGERCKYHHPIDRSALS 433
Query: 122 ----GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V GLP R+ + CPYY++TG+CKFG CKF HP P +
Sbjct: 434 LSKQATVKLTPAGLPRREGDVICPYYLKTGTCKFGATCKFDHPPPGEV 481
Score = 94.4 bits (233), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 108/258 (41%), Gaps = 75/258 (29%)
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP 186
N+ P R EK C +YM T +CKFG +CKF HP +P
Sbjct: 138 NMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP----------------------VWVP 175
Query: 187 SSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGS-NLIYSSRNQG-DLGAGAQMHILSASS 244
G+ P W + +P G + Y + Q G+ + + SS
Sbjct: 176 EGGI--------PDWKEVPNVVTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSS 227
Query: 245 QN------LPERPDQPDCRYYMNTGTCKYGADCKFHHPK-----------ERIAQS---- 283
+N LPERP +P C +YM TG C+YG CKFHHPK + +AQ+
Sbjct: 228 ENADVSSGLPERPSEPPCAFYMKTGKCRYGTACKFHHPKDIQIQLSDDLSQNVAQTQTNS 287
Query: 284 ----AASNIGPL------------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYP 327
A + P+ GLP R G+ C Y G CK+G +CR++HP
Sbjct: 288 MMGGATGDTQPIKSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVSCRYNHPDRN-A 346
Query: 328 INYGLSLPPLSILDSSLM 345
IN PP++ L +S++
Sbjct: 347 IN-----PPIAGLGASIL 359
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 13/92 (14%)
Query: 241 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHH---------PKERIAQSAASNIGP 290
SAS+ + P+RP + DC +YM T TCK+G CKF H P + + ++ P
Sbjct: 135 SASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPDWKEVPNVVTSETP 194
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG+ C + CKFG C+F+HP
Sbjct: 195 ---PERPGEPDCPYFLKTQRCKFGSKCKFNHP 223
>gi|226508854|ref|NP_001150919.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
gi|195642960|gb|ACG40948.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
gi|414876867|tpg|DAA53998.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 1 [Zea mays]
gi|414876868|tpg|DAA53999.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 2 [Zea mays]
gi|414876869|tpg|DAA54000.1| TPA: zinc finger CCCH type domain-containing protein ZFN-like 1
isoform 3 [Zea mays]
Length = 471
Score = 212 bits (539), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 141/355 (39%), Positives = 174/355 (49%), Gaps = 77/355 (21%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA + PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QYFPERQGQPVC 116
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG CKFG C
Sbjct: 117 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTC 176
Query: 156 KFHHPQ-------------------PSSL--------GTALPLTGNASLGSMGSSVLPSS 188
KFHHP+ PS L G + + G+ GS VLPS
Sbjct: 177 KFHHPEFGGIPVTPGIYPALQSASVPSPLTYASNWQMGRSPAVPGSYIAGSYTPMVLPS- 235
Query: 189 GLQYAGIVPAPGWNTYMGNI--------------GPL-------SPTSIA--GSNLIYSS 225
G+VP GW+ Y + GPL S T+IA G+ L YSS
Sbjct: 236 -----GMVPLQGWSPYPAPVNHVASGGAQQTIQAGPLYGIGHHGSSTAIAYGGTYLPYSS 290
Query: 226 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 285
+ G Q H PERP QP+C+YYM TG CK+G CK++HP++ +
Sbjct: 291 -STGQSSNNHQEH-------GFPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSN 342
Query: 286 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
L LP RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 343 YMFSHLCLPLRPGAQPCTYYAQNGYCRYGIACKYDHPMGT--LGYSSSALPLSDM 395
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +G+ C++NHP ++ + Y LP R G C YY
Sbjct: 304 FPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYA 363
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G + + +P+
Sbjct: 364 QNGYCRYGIACKYDHPMGTLGYSSSALPLSDMPI 397
>gi|225452232|ref|XP_002268612.1| PREDICTED: zinc finger CCCH domain-containing protein 43 isoform 1
[Vitis vinifera]
gi|296081325|emb|CBI17707.3| unnamed protein product [Vitis vinifera]
Length = 417
Score = 211 bits (538), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 180/347 (51%), Gaps = 44/347 (12%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREELPE-RNGQPDCGYYLKT 101
YP RP DC +Y RTG C +G NC+FNHP Q + RE E + + +C YYL
Sbjct: 56 YPLRPYAQDCPYYVRTGSCKFGLNCKFNHPVTRTGQVGKERENEGEGLSEKIECKYYLTG 115
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
G CKYG++C+Y H K+ N + +N LGLPMR EK CPYYMRTGSC +G C+FHHP
Sbjct: 116 GGCKYGNSCRYSHSKETNELATLEYNFLGLPMRVGEKECPYYMRTGSCGYGANCRFHHPD 175
Query: 162 PSSLGTALPLTGNASLG---SMGSSVLPSSGLQYAGIV--PAPGWNTYM---------GN 207
P+S+G + P S+G S+G+ S+ L +G P W+++M N
Sbjct: 176 PTSVGGSEPNGNGESVGGFDSLGNHNGESTILNLSGASQPSMPSWSSHMLSNKRVPYSDN 235
Query: 208 IGPLSPT--SIAGS---NL--------IYSSRNQGDLGAGAQMHILSASS---------- 244
P S+A NL I+S L +G ++ L S
Sbjct: 236 RSSYVPAMHSVAQGIHPNLDLNGYQAPIHSQGMPRHLHSGLTLNKLMKKSDVSQHYEQTQ 295
Query: 245 -QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 303
+ PERP +P+C Y+M TG CKY + C++HHPK R+ + GLP RPG+ IC
Sbjct: 296 VEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKICW 355
Query: 304 NYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 350
+Y YGICK+G C FDHP P + S P S LD L ++ A
Sbjct: 356 HYESYGICKYGRACLFDHP----PNHTPSSFPVGSKLDPPLGHNSAT 398
Score = 87.8 bits (216), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 51/123 (41%), Positives = 72/123 (58%), Gaps = 6/123 (4%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPMRQDEKSCPY 142
EE PER G+P+C Y++KTG CKY S C+YHHPK R PV + + GLP+R +K C +
Sbjct: 297 EEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKICWH 356
Query: 143 YMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI---VPAP 199
Y G CK+G AC F HP P+ ++ P+ G+ +G + G + AG + A
Sbjct: 357 YESYGICKYGRACLFDHP-PNHTPSSFPV-GSKLDPPLGHNSATVGGNRMAGCQDEIQAS 414
Query: 200 GWN 202
GW+
Sbjct: 415 GWD 417
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 49/94 (52%), Gaps = 7/94 (7%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPD 94
Q +P RPG+P+C ++ +TG C Y S CR++HP G A + LP R G+
Sbjct: 294 TQVEEFPERPGKPECDYFMKTGDCKYKSACRYHHPKSRVPGLPVCALSDKGLPLRPGKKI 353
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
C +Y G CKYG C + HP + P SF +
Sbjct: 354 CWHYESYGICKYGRACLFDHPPNHT---PSSFPV 384
>gi|224028495|gb|ACN33323.1| unknown [Zea mays]
gi|238011118|gb|ACR36594.1| unknown [Zea mays]
gi|407232628|gb|AFT82656.1| C3H28 transcription factor, partial [Zea mays subsp. mays]
gi|413947003|gb|AFW79652.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
1 [Zea mays]
gi|413947004|gb|AFW79653.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
2 [Zea mays]
gi|413947005|gb|AFW79654.1| zinc finger CCCH type domain-containing protein ZFN-like 1 isoform
3 [Zea mays]
Length = 471
Score = 211 bits (538), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 131/330 (39%), Positives = 169/330 (51%), Gaps = 63/330 (19%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA ++ PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QDFPERQGQPVC 116
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG CKFG C
Sbjct: 117 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRLGEKECSYYMKTGQCKFGSTC 176
Query: 156 KFHHPQ----PSSLGTALPLTG-----------NASLG---SMGSSVLPSS---GLQYAG 194
KFHHP+ P + G PL N +G ++ S +P S + +G
Sbjct: 177 KFHHPEFGGIPVTPGIYPPLQSPSVPSPHTYAPNWQMGRSPAVPGSYIPGSYTPMMISSG 236
Query: 195 IVPAPGWNTYMGNIGPL---------------------SPTSIA--GSNLIYSSRNQGDL 231
+VP GW+ Y ++ P+ S T+IA G+ L YSS + G
Sbjct: 237 MVPLQGWSPYPASVNPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-SAGQS 295
Query: 232 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 291
Q H PERP QP+C+YYM TG CK+G CK++HP++ + L
Sbjct: 296 SNNHQEH-------GFPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKSNYMFSHL 348
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
LP RPG C+ Y+ G C++G C++DH
Sbjct: 349 CLPLRPGAQPCAYYAQNGYCRYGVACKYDH 378
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 302
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 57 RLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQDFPERQGQPVC 116
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y G CKFG C++ HP
Sbjct: 117 EYYLKTGTCKFGSNCKYHHP 136
>gi|226504738|ref|NP_001150480.1| LOC100284111 [Zea mays]
gi|195639552|gb|ACG39244.1| zinc finger CCCH type domain-containing protein ZFN-like 1 [Zea
mays]
Length = 471
Score = 210 bits (535), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 129/329 (39%), Positives = 168/329 (51%), Gaps = 61/329 (18%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQY--------REELPERNGQPDCG 96
P RPGE DC +Y RTG CG+G CR+NHP G ++ ++ PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRG-GTEFGGGTKNGAAQDFPERQGQPVCE 117
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG CKFG CK
Sbjct: 118 YYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRLGEKECSYYMKTGQCKFGSTCK 177
Query: 157 FHHPQ----PSSLGTALPLTG-----------NASLG---SMGSSVLPSS---GLQYAGI 195
FHHP+ P + G PL N +G ++ S +P S + +G+
Sbjct: 178 FHHPEFGGIPVTPGIYPPLQSPSVPSPHTYAPNWQMGRSPAVPGSYIPGSYTPMMISSGM 237
Query: 196 VPAPGWNTYMGNIGPL---------------------SPTSIA--GSNLIYSSRNQGDLG 232
VP GW+ Y ++ P+ S T+IA G+ L YSS + G
Sbjct: 238 VPLQGWSPYPASVNPVASGGAQQTVQAGPLYGIGHHGSSTAIAYGGTYLPYSS-SAGQSS 296
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
Q H PERP QP+C+YYM TG CK+G CK++HP++ L
Sbjct: 297 NNHQEH-------GFPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKTNYMFSHLC 349
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDH 321
LP RPG C+ Y+ G C++G C++DH
Sbjct: 350 LPLRPGAQPCAYYAQNGYCRYGVACKYDH 378
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAIC 302
LPERP + DC YY+ TG C +G C+++HP++R N P R GQ +C
Sbjct: 57 RLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGTKNGAAQDFPERQGQPVC 116
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y G CKFG C++ HP
Sbjct: 117 EYYLKTGTCKFGSNCKYHHP 136
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +G+ C++NHP ++ Y LP R G C YY
Sbjct: 304 FPERPGQPECQYYMRTGDCKFGTTCKYNHPRDWSTPKTNYMFSHLCLPLRPGAQPCAYYA 363
Query: 100 KTGTCKYGSTCKYHH 114
+ G C+YG CKY H
Sbjct: 364 QNGYCRYGVACKYDH 378
>gi|356557823|ref|XP_003547210.1| PREDICTED: zinc finger CCCH domain-containing protein 58-like
[Glycine max]
Length = 481
Score = 208 bits (529), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 133/359 (37%), Positives = 179/359 (49%), Gaps = 59/359 (16%)
Query: 15 QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP- 73
++ +EE +W+L + GG + S YP RP E DC +Y RTG CG+GS CRFNHP
Sbjct: 23 EAQTGLEEPMWQLGM------GGAGEES-YPQRPDEVDCTYYLRTGFCGFGSRCRFNHPR 75
Query: 74 --AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG--AGPVSFNIL 129
A A + E PER GQP C YY++T TCK+GS+CKYHHP+ G A P+S +
Sbjct: 76 DRAAVAGAERTTGEYPERVGQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYY 135
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL----------------------GT 167
G P+R EK C YY++TG CKFG CKFHHP P+ + T
Sbjct: 136 GYPLRPGEKECSYYVKTGQCKFGATCKFHHPVPAGVQIPAPSPVAPSPLPVPVPSPLYST 195
Query: 168 ALPLTGNAS--LGSMGSS--VLPSSGLQYA--------GIVPAPGWNTY-MGNIGPLSPT 214
P G +S +G + + +LP S +Q +VP GW Y +G + P
Sbjct: 196 MQPPPGPSSQQIGVLVARPPMLPGSLVQSPYGPVVLSPAMVPISGWGPYQVGAVHPSGTP 255
Query: 215 SIAGSNLIYSSRNQGDLGAG-----------AQMHILSASSQNLPERPDQPDCRYYMNTG 263
S GS +Y A S Q PER +QP+ +YY TG
Sbjct: 256 SNVGSPQLYGITQLPSPVAAYPGPYQPSGSPVGPSSSSQKEQAFPERSNQPEYQYYPKTG 315
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA-ICSNYSMYGICKFGPTCRFDH 321
K+G +++ P + A A + P GLP RPG A C +Y+ +G+CKFG C+FDH
Sbjct: 316 EVKFGPSYRYNPPPDMSAPKANVILSPAGLPLRPGAAPACIHYAQHGVCKFGSACKFDH 374
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 58/110 (52%), Gaps = 15/110 (13%)
Query: 236 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 295
Q+ + A ++ P+RPD+ DC YY+ TG C +G+ C+F+HP++R A + A P
Sbjct: 34 QLGMGGAGEESYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVAGAERTT-GEYPE 92
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDHP--------------YAGYPINYG 331
R GQ +C Y CKFG +C++ HP Y GYP+ G
Sbjct: 93 RVGQPVCQYYMRTRTCKFGSSCKYHHPRQAGGTAATPMSLSYYGYPLRPG 142
>gi|356523523|ref|XP_003530387.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Glycine max]
Length = 508
Score = 208 bits (529), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 117/331 (35%), Positives = 166/331 (50%), Gaps = 69/331 (20%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE 88
I D +E V +P P RPGEPDC ++ +T C +GS C+FNHP +++ A LPE
Sbjct: 178 IPDWKEVPIVTSETP-PERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSSGLPE 236
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKD------------------------------- 117
R +P C +Y+KTG C+YG+ CK+HHPKD
Sbjct: 237 RPSEPPCAFYMKTGKCRYGAACKFHHPKDIQIQLSNDSSQTVAQTQTNSIMGWATGDTPP 296
Query: 118 -RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
++ P N GLP+R E CP+YM+TGSCK+GV C+++HP +++ N
Sbjct: 297 IQSLISPSLQNSKGLPVRLGEVDCPFYMKTGSCKYGVTCRYNHPDRNAI--------NPP 348
Query: 177 LGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSP-TSIAGSNLIYSSRNQGDLGAGA 235
+ +G+S+ PSS NIG L+P S+ + S +G
Sbjct: 349 IAGLGASIFPSSAANL--------------NIGLLNPAVSVYQAFEPRLSNPMSQVGIAD 394
Query: 236 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER----IAQSAASNIGPL 291
++ P+RP Q +C +YM TG CK+G CK+HHP +R +++ A + P
Sbjct: 395 TIY---------PQRPGQIECDFYMKTGECKFGERCKYHHPIDRSAPSLSKQATVKLTPA 445
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
GLP R G IC Y G CKFG TC+FDHP
Sbjct: 446 GLPRREGAVICPYYLKTGTCKFGATCKFDHP 476
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 77/170 (45%), Gaps = 49/170 (28%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-------AYAAQGAQ---------------- 81
P R GE DC FY +TG C YG CR+NHP A GA
Sbjct: 312 PVRLGEVDCPFYMKTGSCKYGVTCRYNHPDRNAINPPIAGLGASIFPSSAANLNIGLLNP 371
Query: 82 -------YREEL--------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ L P+R GQ +C +Y+KTG CK+G CKYHHP DR+
Sbjct: 372 AVSVYQAFEPRLSNPMSQVGIADTIYPQRPGQIECDFYMKTGECKFGERCKYHHPIDRSA 431
Query: 121 -----AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V GLP R+ CPYY++TG+CKFG CKF HP P +
Sbjct: 432 PSLSKQATVKLTPAGLPRREGAVICPYYLKTGTCKFGATCKFDHPPPGEV 481
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 88/322 (27%), Positives = 128/322 (39%), Gaps = 79/322 (24%)
Query: 64 YGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
Y +N P Y + A P+R G+ DC +Y+ T TCK+G +CK+ HP G
Sbjct: 121 YSTNPLAKRPRY--ESASNMTIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPFWVPEGGI 178
Query: 124 VSFNILGL------PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS----LGTALP--- 170
+ + + P R E CPY+++T CKFG CKF+HP+ SS + + LP
Sbjct: 179 PDWKEVPIVTSETPPERPGEPDCPYFLKTQRCKFGSKCKFNHPKVSSENADVSSGLPERP 238
Query: 171 ---------LTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNL 221
TG G+ + + + N + SI G
Sbjct: 239 SEPPCAFYMKTGKCRYGA-------ACKFHHPKDIQIQLSNDSSQTVAQTQTNSIMGWAT 291
Query: 222 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-- 279
+ Q + Q +S+ LP R + DC +YM TG+CKYG C+++HP
Sbjct: 292 GDTPPIQSLISPSLQ------NSKGLPVRLGEVDCPFYMKTGSCKYGVTCRYNHPDRNAI 345
Query: 280 ----------IAQSAASNIGPLGL-----------------------------PSRPGQA 300
I S+A+N+ +GL P RPGQ
Sbjct: 346 NPPIAGLGASIFPSSAANLN-IGLLNPAVSVYQAFEPRLSNPMSQVGIADTIYPQRPGQI 404
Query: 301 ICSNYSMYGICKFGPTCRFDHP 322
C Y G CKFG C++ HP
Sbjct: 405 ECDFYMKTGECKFGERCKYHHP 426
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
P RPG+ C++Y + CKFG +C+FDHP+
Sbjct: 142 PQRPGEKDCAHYMLTRTCKFGDSCKFDHPF 171
>gi|357447361|ref|XP_003593956.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355483004|gb|AES64207.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 482
Score = 201 bits (512), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 133/371 (35%), Positives = 178/371 (47%), Gaps = 63/371 (16%)
Query: 16 SADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA- 74
S +EE +W+L + + YP RP E DC +Y RTG CG+GS CRFNHP
Sbjct: 21 SQTGLEEPMWQLGLGSGG-----SGEDSYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRD 75
Query: 75 -YAAQGAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG--AGPVSFNIL 129
A GA R E PER GQP C YY++T +CK+G++CKYHHPK A PVS N
Sbjct: 76 RAAVIGAASRTVGEYPERVGQPVCQYYMRTRSCKFGASCKYHHPKQTGATDASPVSLNYY 135
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL----------------PLTG 173
G P+R EK C Y+++TG CKFG CKF HP P+S+ PL
Sbjct: 136 GYPLRPGEKECSYFVKTGQCKFGATCKFDHPVPASVQIPAPSPVPPVSSLHVPVPSPLYP 195
Query: 174 NASLGSMGSS-----------VLPSSGLQ--------YAGIVPAPGWNTYMGN-IGPL-- 211
S SS +L S +Q +VP GW Y P+
Sbjct: 196 TVQTPSGPSSQQIGVLVARPPLLHGSFVQSPYGPMVLSPTMVPFSGWGPYQATATSPVLP 255
Query: 212 --SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS----------QNLPERPDQPDCRYY 259
SP ++ + L ++ A + LS SS Q+ P P+QP+ YY
Sbjct: 256 SGSPANVGSTQLYGITQLPSPGNAYTGPYQLSGSSVGPSSRNQNEQSFPASPNQPEYHYY 315
Query: 260 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 319
+ ++H P + A + + P GLP RPG A+C++Y+ GICKFGP C+F
Sbjct: 316 SKPEELPFAPSYRYHKPPDMSAPKVNAVLSPAGLPLRPGAALCTHYAQRGICKFGPACKF 375
Query: 320 DHPYAGYPINY 330
DHP A P++Y
Sbjct: 376 DHPIA--PLSY 384
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 54/100 (54%), Gaps = 14/100 (14%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ P+RPD+ DC YY+ TG C +G+ C+F+HP++R A A++ P R GQ +C Y
Sbjct: 43 SYPQRPDEVDCTYYLRTGFCGFGSRCRFNHPRDRAAVIGAASRTVGEYPERVGQPVCQYY 102
Query: 306 SMYGICKFGPTCRFDHP--------------YAGYPINYG 331
CKFG +C++ HP Y GYP+ G
Sbjct: 103 MRTRSCKFGASCKYHHPKQTGATDASPVSLNYYGYPLRPG 142
>gi|357477239|ref|XP_003608905.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355509960|gb|AES91102.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 307
Score = 201 bits (511), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/278 (39%), Positives = 150/278 (53%), Gaps = 37/278 (13%)
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQD 136
+ + REE E GQ +C YY ++G CK+G CKY+H R P+S N LGLP+R
Sbjct: 6 EKVREREEPEENAGQTECKYYQRSGGCKFGKACKYNH--SRGFTAPISELNFLGLPIRLG 63
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIV 196
E+ CPYYMRTGSCKFG C+F+HP P+++G + P +G + GS+ L+
Sbjct: 64 ERECPYYMRTGSCKFGSNCRFNHPDPTTVGGSDPQSGYGNGGSVS--------LRGVSQQ 115
Query: 197 PAPGWNTYMGN---IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASS--------- 244
P W++ N PL PT G S N A I+ SS
Sbjct: 116 PVASWSSRKLNETPFAPLMPTPTQGLAPQTSDWNGYQAPAYLSERIMHPSSTYVMNNPTI 175
Query: 245 --------------QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP 290
+ PERP +P+C +++ TG CK+ ++CKFHHPK R+A+ N+
Sbjct: 176 DTNVYMHHQKQMPFEVFPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSD 235
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
GLP RP Q++CS+YS YGICKFGP CRFDHP + P+
Sbjct: 236 KGLPLRPDQSVCSHYSRYGICKFGPACRFDHPESALPL 273
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 44/77 (57%), Gaps = 4/77 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYL 99
+P RPGEP+C F+ +TG C + SNC+F+HP + LP R Q C +Y
Sbjct: 192 FPERPGEPECSFFIKTGDCKFKSNCKFHHPKNRVAKLPPCNLSDKGLPLRPDQSVCSHYS 251
Query: 100 KTGTCKYGSTCKYHHPK 116
+ G CK+G C++ HP+
Sbjct: 252 RYGICKFGPACRFDHPE 268
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P R GE +C +Y RTG C +GSNCRFNHP
Sbjct: 59 PIRLGERECPYYMRTGSCKFGSNCRFNHP 87
>gi|224133812|ref|XP_002321667.1| predicted protein [Populus trichocarpa]
gi|222868663|gb|EEF05794.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 200 bits (508), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/304 (38%), Positives = 156/304 (51%), Gaps = 47/304 (15%)
Query: 58 RTGLCGYGSNCRFNHPAY-----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
+TG C +G NC+FNHP + + REE E+ GQ +C YYL+TG CKYG C++
Sbjct: 2 KTGTCKFGVNCKFNHPVRRKNQAVKENVKEREEATEKPGQTECKYYLRTGGCKYGKACRF 61
Query: 113 HHPKDRNGAGP---------VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
+H +++ + P + N LGLP+R EK C +YMR GSCK+G CK++HP P
Sbjct: 62 NHTREKTFSVPPLKTPMPSILELNFLGLPIRPGEKQCEFYMRNGSCKYGATCKYNHPDPM 121
Query: 164 SLG-----TALPLTGNASLGSMGSSVLPSSGLQYAGIVPAP----------------GWN 202
++G +A G SL + S + S A P P WN
Sbjct: 122 AVGGSDLTSAFVNGGTTSLPAPSPSSVGSWSSPRALNDPTPFVPYVFSPTRLPSQSSEWN 181
Query: 203 TYMGNIGPLS-----PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCR 257
Y G + P P S A SN + ++ A Q + PERP Q C
Sbjct: 182 GYQGTLYPPERSLHPPPSYAMSN----PATESNVYAPQQQQTVV---DEFPERPGQQLCS 234
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 317
Y+M G CK+ ++CK+HHPK RI +S + + GLP RP Q ICS YS YGICKFGP C
Sbjct: 235 YFMKFGDCKFKSNCKYHHPKNRIPKSPSLTLSDKGLPLRPDQIICSYYSRYGICKFGPAC 294
Query: 318 RFDH 321
+FDH
Sbjct: 295 KFDH 298
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 48/82 (58%), Gaps = 8/82 (9%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS--------AASNIGPLGLPSRPGQA 300
E+P Q +C+YY+ TG CKYG C+F+H +E+ + + LGLP RPG+
Sbjct: 37 EKPGQTECKYYLRTGGCKYGKACRFNHTREKTFSVPPLKTPMPSILELNFLGLPIRPGEK 96
Query: 301 ICSNYSMYGICKFGPTCRFDHP 322
C Y G CK+G TC+++HP
Sbjct: 97 QCEFYMRNGSCKYGATCKYNHP 118
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 48/92 (52%), Gaps = 11/92 (11%)
Query: 260 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS-RPGQAICSNYSMYGICKFGPTCR 318
M TGTCK+G +CKF+HP R Q+ N+ + +PGQ C Y G CK+G CR
Sbjct: 1 MKTGTCKFGVNCKFNHPVRRKNQAVKENVKEREEATEKPGQTECKYYLRTGGCKYGKACR 60
Query: 319 FDHPYAGYPINYGLSLPPL-----SILDSSLM 345
F+H S+PPL SIL+ + +
Sbjct: 61 FNHTREK-----TFSVPPLKTPMPSILELNFL 87
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYL 99
+P RPG+ C ++ + G C + SNC+++HP + + LP R Q C YY
Sbjct: 224 FPERPGQQLCSYFMKFGDCKFKSNCKYHHPKNRIPKSPSLTLSDKGLPLRPDQIICSYYS 283
Query: 100 KTGTCKYGSTCKYHH 114
+ G CK+G CK+ H
Sbjct: 284 RYGICKFGPACKFDH 298
Score = 45.4 bits (106), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 22/35 (62%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG 79
P RPGE C FY R G C YG+ C++NHP A G
Sbjct: 90 PIRPGEKQCEFYMRNGSCKYGATCKYNHPDPMAVG 124
>gi|147833028|emb|CAN72812.1| hypothetical protein VITISV_004748 [Vitis vinifera]
Length = 1504
Score = 197 bits (500), Expect = 1e-47, Method: Composition-based stats.
Identities = 123/364 (33%), Positives = 172/364 (47%), Gaps = 62/364 (17%)
Query: 10 NAVANQSADNIEEAIWRL-KIHDNQEGGGV-----AQASPYPARPGEPDCLFYRRTGLCG 63
N + S + E+ I L + + + G GV A P RPGEPDC ++ +T C
Sbjct: 337 NTIMGMSVEGFEKEINSLLRKMEARRGCGVMVPIVAANEFLPQRPGEPDCPYFMKTQKCK 396
Query: 64 YGSNCRFNHPA--YAAQGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD- 117
+G C+FNHP + GA + LPER + C +Y+KTG CK+G+TCK+HHPKD
Sbjct: 397 FGHKCKFNHPKDQIISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKDI 456
Query: 118 ------------------RNGAG-------PVSF------NILGLPMRQDEKSCPYYMRT 146
GAG PVS N GLPMR E CP+Y++T
Sbjct: 457 QIASTGKNNADGEQAETGAKGAGTTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKT 516
Query: 147 GSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMG 206
GSCK+G C+++HP +++ G+A + S P++ L + P + +
Sbjct: 517 GSCKYGATCRYNHPDRNAINPPAAAIGHAIVAS------PAANLNVGVVNPV---TSILH 567
Query: 207 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
I P ++ IY R G + +H+L S +P D +YM TG CK
Sbjct: 568 PIDPRLSQTMGVGPTIYPQR-PGQMECDVCLHLL---SNFIPTDATFMD-EFYMKTGECK 622
Query: 267 YGADCKFHHPKERIAQSAAS-----NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+G CKFHHP +R A +A + G P R G IC Y G CK+G TC+FDH
Sbjct: 623 FGERCKFHHPIDRSAPTATKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDH 682
Query: 322 PYAG 325
P G
Sbjct: 683 PPPG 686
Score = 106 bits (264), Expect = 2e-20, Method: Composition-based stats.
Identities = 60/187 (32%), Positives = 79/187 (42%), Gaps = 66/187 (35%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-------AYAAQG----AQYREEL------- 86
P R GE DC FY +TG C YG+ CR+NHP AA G A L
Sbjct: 502 PMRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHAIVASPAANLNVGVVNP 561
Query: 87 -----------------------PERNGQPDCG-------------------YYLKTGTC 104
P+R GQ +C +Y+KTG C
Sbjct: 562 VTSILHPIDPRLSQTMGVGPTIYPQRPGQMECDVCLHLLSNFIPTDATFMDEFYMKTGEC 621
Query: 105 KYGSTCKYHHPKDRNGAGP------VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFH 158
K+G CK+HHP DR+ + + G P R+ CP+Y++TG+CK+GV CKF
Sbjct: 622 KFGERCKFHHPIDRSAPTATKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFD 681
Query: 159 HPQPSSL 165
HP P +
Sbjct: 682 HPPPGEV 688
>gi|297834072|ref|XP_002884918.1| enhancer of ag-4 1 [Arabidopsis lyrata subsp. lyrata]
gi|297330758|gb|EFH61177.1| enhancer of ag-4 1 [Arabidopsis lyrata subsp. lyrata]
Length = 519
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 119/316 (37%), Positives = 164/316 (51%), Gaps = 75/316 (23%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 219 YPERPGEPDCPYYIKTQRCKYGSRCKFNHPREEAAVSVETQDALPERPSEPMCTFYMKTG 278
Query: 103 TCKYGSTCKYHHPKD--------RNGAGP-------------VSF------NILGLPMRQ 135
CK+G TCK+HHPKD NG+ V+F N GLP+R
Sbjct: 279 KCKFGLTCKFHHPKDIQVPSSSQDNGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRP 338
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI 195
E CP+Y++TGSCK+G C+++HP+ ++ + ++G+ Y+ +
Sbjct: 339 GEVDCPFYLKTGSCKYGATCRYNHPERTAF------------------IPQATGINYSLV 380
Query: 196 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 255
NT N+G ++P + Y + Q LGA LSA+ P+RP Q +
Sbjct: 381 ----SSNTANLNLGMVTP-----ATSFYQTLTQPTLGA------LSAT---YPQRPGQSE 422
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASN---------IGPLGLPSRPGQAICSNYS 306
C YYM TG CK+G C+FHHP +R+ SA SN + G P R G C Y
Sbjct: 423 CDYYMKTGECKFGERCRFHHPADRL--SATSNQASQQPNVKLSLAGYPRREGALNCPYYM 480
Query: 307 MYGICKFGPTCRFDHP 322
G CK+G TC+FDHP
Sbjct: 481 KTGTCKYGATCKFDHP 496
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 80/167 (47%), Gaps = 46/167 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREEL--------------- 86
P RPGE DC FY +TG C YG+ CR+NHP A+ Q L
Sbjct: 335 PVRPGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQATGINYSLVSSNTANLNLGMVTP 394
Query: 87 --------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP--- 123
P+R GQ +C YY+KTG CK+G C++HHP DR A
Sbjct: 395 ATSFYQTLTQPTLGALSATYPQRPGQSECDYYMKTGECKFGERCRFHHPADRLSATSNQA 454
Query: 124 -----VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V ++ G P R+ +CPYYM+TG+CK+G CKF HP P +
Sbjct: 455 SQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEV 501
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 217 EEYPERPGEPDCPYYIKTQRCKYGSRCKFNHPREEAAVSVETQD---ALPERPSEPMCTF 273
Query: 305 YSMYGICKFGPTCRFDHP 322
Y G CKFG TC+F HP
Sbjct: 274 YMKTGKCKFGLTCKFHHP 291
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 11/88 (12%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL---P 87
A ++ YP RPG+ +C +Y +TG C +G CRF+HPA A+Q + L P
Sbjct: 409 ALSATYPQRPGQSECDYYMKTGECKFGERCRFHHPADRLSATSNQASQQPNVKLSLAGYP 468
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 469 RREGALNCPYYMKTGTCKYGATCKFDHP 496
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 302
P+R + DC +YM T TCK+G CKF H P+ I + + P P RPG+ C
Sbjct: 169 PQRAGEKDCTHYMQTRTCKFGDSCKFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 228
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y CK+G C+F+HP
Sbjct: 229 PYYIKTQRCKYGSRCKFNHP 248
>gi|110738176|dbj|BAF01019.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
Length = 522
Score = 194 bits (492), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 159/314 (50%), Gaps = 71/314 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 220 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 279
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMRQ 135
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 280 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 339
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI 195
E CP+Y++TGSCK+G C+++HP+ ++ + ++G+ Y+ +
Sbjct: 340 GEVDCPFYLKTGSCKYGATCRYNHPERTAF------------------IPQAAGVNYSLV 381
Query: 196 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 255
NT N+G ++P + Y + Q LG ++SA+ P+RP Q +
Sbjct: 382 ----SSNTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSE 423
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMY 308
C YYM TG CK+G CKFHHP +R++ Q + G P R G C Y
Sbjct: 424 CDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKT 483
Query: 309 GICKFGPTCRFDHP 322
G CK+G TC+FDHP
Sbjct: 484 GTCKYGATCKFDHP 497
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 46/167 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREEL--------------- 86
P R GE DC FY +TG C YG+ CR+NHP A+ Q A L
Sbjct: 336 PVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTP 395
Query: 87 --------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP--- 123
P+R GQ +C YY+KTG CK+G CK+HHP DR A
Sbjct: 396 ATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQA 455
Query: 124 -----VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V ++ G P R+ +CPYYM+TG+CK+G CKF HP P +
Sbjct: 456 PQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEV 502
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 218 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCTF 274
Query: 305 YSMYGICKFGPTCRFDHP 322
Y G CKFG +C+F HP
Sbjct: 275 YMKTGKCKFGLSCKFHHP 292
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL-- 86
GV A+ YP RPG+ +C +Y +TG C +G C+F+HPA A Q + L
Sbjct: 409 GVISAT-YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG 467
Query: 87 -PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 468 YPRREGALNCPYYMKTGTCKYGATCKFDHP 497
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 302
P+R + DC +YM T TCK+G C+F H P+ I + + P P RPG+ C
Sbjct: 170 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 229
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y CK+G C+F+HP
Sbjct: 230 PYYIKTQRCKYGSKCKFNHP 249
>gi|22331028|ref|NP_187874.2| zinc finger CCCH domain-containing protein 37 [Arabidopsis
thaliana]
gi|75249536|sp|Q941Q3.1|C3H37_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 37;
Short=AtC3H37; AltName: Full=ENHANCER OF AG-4 protein 1
gi|16797661|gb|AAK01470.1| floral homeotic protein HUA1 [Arabidopsis thaliana]
gi|332641710|gb|AEE75231.1| zinc finger CCCH domain-containing protein 37 [Arabidopsis
thaliana]
Length = 524
Score = 194 bits (492), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 112/314 (35%), Positives = 159/314 (50%), Gaps = 71/314 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 222 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 281
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMRQ 135
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 282 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 341
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI 195
E CP+Y++TGSCK+G C+++HP+ ++ + ++G+ Y+ +
Sbjct: 342 GEVDCPFYLKTGSCKYGATCRYNHPERTAF------------------IPQAAGVNYSLV 383
Query: 196 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 255
NT N+G ++P + Y + Q LG ++SA+ P+RP Q +
Sbjct: 384 ----SSNTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSE 425
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMY 308
C YYM TG CK+G CKFHHP +R++ Q + G P R G C Y
Sbjct: 426 CDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKT 485
Query: 309 GICKFGPTCRFDHP 322
G CK+G TC+FDHP
Sbjct: 486 GTCKYGATCKFDHP 499
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 80/167 (47%), Gaps = 46/167 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREEL--------------- 86
P R GE DC FY +TG C YG+ CR+NHP A+ Q A L
Sbjct: 338 PVRSGEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTP 397
Query: 87 --------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP--- 123
P+R GQ +C YY+KTG CK+G CK+HHP DR A
Sbjct: 398 ATSFYQTLTQPTLGVISATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQA 457
Query: 124 -----VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V ++ G P R+ +CPYYM+TG+CK+G CKF HP P +
Sbjct: 458 PQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHPPPGEV 504
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 220 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCTF 276
Query: 305 YSMYGICKFGPTCRFDHP 322
Y G CKFG +C+F HP
Sbjct: 277 YMKTGKCKFGLSCKFHHP 294
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL-- 86
GV A+ YP RPG+ +C +Y +TG C +G C+F+HPA A Q + L
Sbjct: 411 GVISAT-YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG 469
Query: 87 -PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 470 YPRREGALNCPYYMKTGTCKYGATCKFDHP 499
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGP-LGLPSRPGQAIC 302
P+R + DC +YM T TCK+G C+F H P+ I + + P P RPG+ C
Sbjct: 172 PQRAGEKDCTHYMQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDC 231
Query: 303 SNYSMYGICKFGPTCRFDHP 322
Y CK+G C+F+HP
Sbjct: 232 PYYIKTQRCKYGSKCKFNHP 251
>gi|255644834|gb|ACU22918.1| unknown [Glycine max]
Length = 264
Score = 193 bits (491), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 106/223 (47%), Positives = 137/223 (61%), Gaps = 27/223 (12%)
Query: 194 GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ 253
G++P WN YMGN+ P P GSNL+Y N G+ G Q A + LP RPDQ
Sbjct: 68 GVIPVQSWNNYMGNMNPAMPNGFLGSNLVYDYMNLGESLFGGQ-----AINSALPNRPDQ 122
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
P+CRY+M+TGTCKYG+DCKFHHPKER++QS I PLGLP RPGQA+CS Y +YG+CKF
Sbjct: 123 PECRYFMSTGTCKYGSDCKFHHPKERMSQSL---INPLGLPVRPGQAVCSYYRIYGMCKF 179
Query: 314 GPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNS 373
GPTC+FDHP P NYGL+ P +++LD+ L + +S ETSP S +Q+S
Sbjct: 180 GPTCKFDHPVLTIPQNYGLTSPAMNVLDTPLT--RGLSNVQPPETSPSKLSDKK--LQHS 235
Query: 374 DAVSVQHQNPDMKNSTTKNSDDSSKVDHPP-HSVPNCSEPPHD 415
DA + ++DSSK D +S P +EP H+
Sbjct: 236 DAKAA--------------TEDSSKQDDTTLNSFPASAEPLHN 264
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 42/82 (51%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK 138
G LP R QP+C Y++ TGTCKYGS CK+HHPK+R + N LGLP+R +
Sbjct: 109 GQAINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSLI--NPLGLPVRPGQA 166
Query: 139 SCPYYMRTGSCKFGVACKFHHP 160
C YY G CKFG CKF HP
Sbjct: 167 VCSYYRIYGMCKFGPTCKFDHP 188
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREELPERNGQPD 94
GG A S P RP +P+C ++ TG C YGS+C+F+HP +Q LP R GQ
Sbjct: 108 GGQAINSALPNRPDQPECRYFMSTGTCKYGSDCKFHHPKERMSQSLINPLGLPVRPGQAV 167
Query: 95 CGYYLKTGTCKYGSTCKYHHPK----DRNGAGPVSFNILGLPMRQ 135
C YY G CK+G TCK+ HP G + N+L P+ +
Sbjct: 168 CSYYRIYGMCKFGPTCKFDHPVLTIPQNYGLTSPAMNVLDTPLTR 212
>gi|12321969|gb|AAG51026.1|AC069474_25 zinc finger protein, putative, 5' partial; 146-2518 [Arabidopsis
thaliana]
Length = 328
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 118/350 (33%), Positives = 170/350 (48%), Gaps = 83/350 (23%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 26 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 85
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMRQ 135
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 86 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 145
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI 195
E CP+Y++TGSCK+G C+++HP+ ++ + ++G+ Y+ +
Sbjct: 146 GEVDCPFYLKTGSCKYGATCRYNHPERTAF------------------IPQAAGVNYSLV 187
Query: 196 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 255
NT N+G ++P + Y + Q LG ++SA+ P+RP Q +
Sbjct: 188 ----SSNTANLNLGLVTP-----ATSFYQTLTQPTLG------VISAT---YPQRPGQSE 229
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMY 308
C YYM TG CK+G CKFHHP +R++ Q + G P R G C Y
Sbjct: 230 CDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKT 289
Query: 309 GICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIET 358
G CK+G TC+FDHP PP ++ + A AT++ T
Sbjct: 290 GTCKYGATCKFDHP------------PPGEVMAKTTSEADAAGATNTDTT 327
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ PERP +PDC YY+ T CKYG+ CKF+HP+E A S + LP RP + +C+
Sbjct: 24 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQD---SLPERPSEPMCTF 80
Query: 305 YSMYGICKFGPTCRFDHP 322
Y G CKFG +C+F HP
Sbjct: 81 YMKTGKCKFGLSCKFHHP 98
Score = 78.6 bits (192), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 12/90 (13%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------YAAQGAQYREEL-- 86
GV A+ YP RPG+ +C +Y +TG C +G C+F+HPA A Q + L
Sbjct: 215 GVISAT-YPQRPGQSECDYYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAG 273
Query: 87 -PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R G +C YY+KTGTCKYG+TCK+ HP
Sbjct: 274 YPRREGALNCPYYMKTGTCKYGATCKFDHP 303
>gi|255575514|ref|XP_002528658.1| conserved hypothetical protein [Ricinus communis]
gi|223531909|gb|EEF33724.1| conserved hypothetical protein [Ricinus communis]
Length = 500
Score = 191 bits (485), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 119/329 (36%), Positives = 161/329 (48%), Gaps = 76/329 (23%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQP 93
A P P RPGEPDC ++ +T C YGS C+FNHP A + + LPER +P
Sbjct: 173 AATTEPLPERPGEPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSEP 232
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKD-------------RNGAGP---------------VS 125
C +Y KTG CK+G+TCK+HHPKD +N A +S
Sbjct: 233 ICAFYAKTGRCKFGATCKFHHPKDIQIALGQENCNIMQNEAAAMTHGTTGDVNAVKACIS 292
Query: 126 FN--IL----GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS 179
FN +L GLP+R E CP+Y++TGSCK+G C+++HP +++ N +
Sbjct: 293 FNQALLHNSKGLPIRPGEVDCPFYLKTGSCKYGATCRYNHPDRNAI--------NPPAAA 344
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHI 239
+G +L S P N +G+I P + A IY S + LG G ++
Sbjct: 345 IGHPLLAS-----------PAANLNLGDINPAASIYQA----IYPSFSSPMLGVGPTIY- 388
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI------AQSAASNIGPLGL 293
P+RP +C YYM TG CK+G C+FHHP +R AQ A + GL
Sbjct: 389 --------PQRPGHAECDYYMKTGECKFGERCRFHHPIDRSAPTATQAQQQAVKLTLAGL 440
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P R G C Y G CK+G TC+FDHP
Sbjct: 441 PRREGAVHCPYYMKTGTCKYGATCKFDHP 469
Score = 172 bits (437), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 112/330 (33%), Positives = 147/330 (44%), Gaps = 86/330 (26%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----------AQYREELPERNG 91
S YP RPGE DC Y T C +G +C+F+HP + +G A E LPER G
Sbjct: 125 SIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPVWVPEGGIPNWKEVPLAATTEPLPERPG 184
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGSCK 150
+PDC Y+LKT CKYGS CK++HPKD G N + LP R E C +Y +TG CK
Sbjct: 185 EPDCPYFLKTQRCKYGSKCKFNHPKDELALGSSQSNDVFALPERPSEPICAFYAKTGRCK 244
Query: 151 FGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGP 210
FG CKFHHP+ + +LG +++ + G G
Sbjct: 245 FGATCKFHHPKDIQI----------ALGQENCNIMQNEAAAMT-----------HGTTGD 283
Query: 211 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
++ S NQ A +H +S+ LP RP + DC +Y+ TG+CKYGA
Sbjct: 284 VNAVKAC------ISFNQ------ALLH----NSKGLPIRPGEVDCPFYLKTGSCKYGAT 327
Query: 271 CKFHHPKER------------IAQSAASN--------------------------IGPLG 292
C+++HP + S A+N +GP
Sbjct: 328 CRYNHPDRNAINPPAAAIGHPLLASPAANLNLGDINPAASIYQAIYPSFSSPMLGVGPTI 387
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG A C Y G CKFG CRF HP
Sbjct: 388 YPQRPGHAECDYYMKTGECKFGERCRFHHP 417
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 60/170 (35%), Positives = 78/170 (45%), Gaps = 49/170 (28%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------------------- 73
P RPGE DC FY +TG C YG+ CR+NHP
Sbjct: 305 PIRPGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHPLLASPAANLNLGDINP 364
Query: 74 ---AYAAQGAQYREEL--------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-- 120
Y A + + P+R G +C YY+KTG CK+G C++HHP DR+
Sbjct: 365 AASIYQAIYPSFSSPMLGVGPTIYPQRPGHAECDYYMKTGECKFGERCRFHHPIDRSAPT 424
Query: 121 -----AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V + GLP R+ CPYYM+TG+CK+G CKF HP P +
Sbjct: 425 ATQAQQQAVKLTLAGLPRREGAVHCPYYMKTGTCKYGATCKFDHPPPGEV 474
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 241 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG--PLG----- 292
SAS+ ++ P+RP + DC +YM T TCK+G CKF HP + + N PL
Sbjct: 120 SASNYSIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPV-WVPEGGIPNWKEVPLAATTEP 178
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RPG+ C + CK+G C+F+HP
Sbjct: 179 LPERPGEPDCPYFLKTQRCKYGSKCKFNHP 208
>gi|147818474|emb|CAN74119.1| hypothetical protein VITISV_002050 [Vitis vinifera]
Length = 1388
Score = 191 bits (485), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 113/292 (38%), Positives = 151/292 (51%), Gaps = 50/292 (17%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSF------NILGLP 132
G RE PER G DC YY+KTG C +GS C+Y+HP+DR+ + +G P
Sbjct: 116 GLSSRESYPERPGVADCVYYMKTGFCGFGSRCRYNHPRDRSSVSTLRSGGGEYPERIGEP 175
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM------------ 180
Q EK C YY++TG CKFG+ CKFHHPQP+ GT+LP + ++
Sbjct: 176 ACQGEKECSYYLKTGQCKFGITCKFHHPQPA--GTSLPASAPTFYPTVQSPSVPTPTQYG 233
Query: 181 GSS---------VLPSSGLQ--YA------GIVPAPGWNTYMGNIGPL-----SPTSIAG 218
G+S VLP S +Q Y G+VP PGW+ Y + P+ PT AG
Sbjct: 234 GTSTSWRVPRPPVLPGSYVQGPYGPVLFPPGVVPIPGWSPYSTPVSPVLSPGAQPTVGAG 293
Query: 219 SNLIYSSRNQGDLGAGAQMHILSAS--------SQNLPERPDQPDCRYYMNTGTCKYGAD 270
S + AG + S++ Q PERP Q +C+YY+ TG CK+G+
Sbjct: 294 SVYGVTQLPSTHTLAGPYASLPSSAGPSSSNQKEQVFPERPGQQECQYYLRTGDCKFGSS 353
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
C++HHP+E + + PLGLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 354 CRYHHPREWVVPKTNCVLSPLGLPLRPGVQPCTFYLQNGYCKFGSTCKFDHP 405
>gi|449524278|ref|XP_004169150.1| PREDICTED: zinc finger CCCH domain-containing protein 6-like,
partial [Cucumis sativus]
Length = 403
Score = 191 bits (484), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 110/287 (38%), Positives = 146/287 (50%), Gaps = 49/287 (17%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPVSFNILGLPMRQDEKSCPY 142
E PER GQP C YY++TG CK+G++CKYHHP+ G+ PVS N G P+R EK C Y
Sbjct: 10 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 69
Query: 143 YMRTGSCKFGVACKFHHPQPSSLG-------TALPLTGNASLGSMGSSVL-PS--SGLQY 192
Y++ G CKFG CKFHHP+P+ L P+ G S+ V PS S QY
Sbjct: 70 YLKNGQCKFGATCKFHHPEPAGLQFPAPSPVQVAPIAGQVPAPSVYPPVQSPSAHSSQQY 129
Query: 193 A-------------------------GIVPAPGWNTYMGNIGPLSPTSI---AGSNLIY- 223
G+V P W+ Y + P++ S GS +Y
Sbjct: 130 GVILARPSLLSNPYVPGPYGPMLVSPGVVQFPSWSPYPAPMSPVASPSAQPSVGSGPLYG 189
Query: 224 ----SSRNQGDLGAGAQMHILSASS-----QNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
S G G+ M SS + PERP QP+C+YYM TG CK+G+ C++H
Sbjct: 190 MAHVSPSASGFAGSYQPMPSTGPSSTSQKEHSFPERPGQPECQYYMRTGDCKFGSSCRYH 249
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
HP E + + + LGLP RPG C+++ G+CKFGP C+FDH
Sbjct: 250 HPPELVTSRPSVVLSQLGLPLRPGAPPCTHFMQRGMCKFGPACKFDH 296
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 40/81 (49%), Positives = 54/81 (66%), Gaps = 1/81 (1%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEK 138
+Q PER GQP+C YY++TG CK+GS+C+YHHP + + P V + LGLP+R
Sbjct: 216 SQKEHSFPERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAP 275
Query: 139 SCPYYMRTGSCKFGVACKFHH 159
C ++M+ G CKFG ACKF H
Sbjct: 276 PCTHFMQRGMCKFGPACKFDH 296
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 49/78 (62%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ PER QP C+YYM TG CK+GA CK+HHP++ + ++ G P RPG+ CS
Sbjct: 10 REYPERIGQPVCQYYMRTGMCKFGASCKYHHPQQERGSLSPVSLNFYGYPLRPGEKECSY 69
Query: 305 YSMYGICKFGPTCRFDHP 322
Y G CKFG TC+F HP
Sbjct: 70 YLKNGQCKFGATCKFHHP 87
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +GS+CR++HP + LP R G P C +++
Sbjct: 222 FPERPGQPECQYYMRTGDCKFGSSCRYHHPPELVTSRPSVVLSQLGLPLRPGAPPCTHFM 281
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G CK+G CK+ H DR P + ++ +P+
Sbjct: 282 QRGMCKFGPACKFDHSMDRLSYSPSASSLADMPV 315
>gi|225462348|ref|XP_002269152.1| PREDICTED: zinc finger CCCH domain-containing protein 37 [Vitis
vinifera]
gi|297736083|emb|CBI24121.3| unnamed protein product [Vitis vinifera]
Length = 535
Score = 188 bits (477), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 122/348 (35%), Positives = 165/348 (47%), Gaps = 77/348 (22%)
Query: 19 NIEEAIWRLK--IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-- 74
+ IW + I D +E VA P RPGEPDC ++ +T C +G C+FNHP
Sbjct: 184 KFDHPIWVPEGGIPDWKEVPIVAANEFLPQRPGEPDCPYFMKTQKCKFGHKCKFNHPKDQ 243
Query: 75 YAAQGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD-------------- 117
+ GA + LPER + C +Y+KTG CK+G+TCK+HHPKD
Sbjct: 244 IISLGAPENTDVFVLPERPSELPCAFYVKTGKCKFGATCKFHHPKDIQIASTGKNNADGE 303
Query: 118 -----RNGAG-------PVSF------NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
GAG PVS N GLPMR E CP+Y++TGSCK+G C+++H
Sbjct: 304 QAETGAKGAGTTGDVKLPVSVTPALVHNSKGLPMRLGEVDCPFYLKTGSCKYGATCRYNH 363
Query: 160 PQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGS 219
P +++ G+A IV +P N +G + P+ TSI
Sbjct: 364 PDRNAINPPAAAIGHA-------------------IVASPAANLNVGVVNPV--TSILHP 402
Query: 220 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
R +G G ++ P+RP Q +C +YM TG CK+G CKFHHP +R
Sbjct: 403 ---IDPRLSQTMGVGPTIY---------PQRPGQMECDFYMKTGECKFGERCKFHHPIDR 450
Query: 280 IAQSAAS-----NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
A +A + G P R G IC Y G CK+G TC+FDHP
Sbjct: 451 SAPTATKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDHP 498
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 78/168 (46%), Gaps = 47/168 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------AYAAQGAQYREEL--- 86
P R GE DC FY +TG C YG+ CR+NHP A+ A +
Sbjct: 336 PMRLGEVDCPFYLKTGSCKYGATCRYNHPDRNAINPPAAAIGHAIVASPAANLNVGVVNP 395
Query: 87 -----------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
P+R GQ +C +Y+KTG CK+G CK+HHP DR+
Sbjct: 396 VTSILHPIDPRLSQTMGVGPTIYPQRPGQMECDFYMKTGECKFGERCKFHHPIDRSAPTA 455
Query: 124 ------VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
+ + G P R+ CP+Y++TG+CK+GV CKF HP P +
Sbjct: 456 TKLQQNIRLTLAGFPRREGTIICPFYLKTGTCKYGVTCKFDHPPPGEV 503
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 48/93 (51%), Gaps = 17/93 (18%)
Query: 243 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIG 289
S+ NLP +RP + DC +YM T TCK+G CKF HP + + AA+
Sbjct: 152 SASNLPIYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPIVAANEF- 210
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RPG+ C + CKFG C+F+HP
Sbjct: 211 ---LPQRPGEPDCPYFMKTQKCKFGHKCKFNHP 240
>gi|125569790|gb|EAZ11305.1| hypothetical protein OsJ_01167 [Oryza sativa Japonica Group]
Length = 376
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 116/295 (39%), Positives = 156/295 (52%), Gaps = 42/295 (14%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYM 144
+ PER GQP C YY+KTGTCK+G+ CKYHHPK PV N G P+R EK C YYM
Sbjct: 20 DYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVMLNNSGFPIRLGEKECSYYM 79
Query: 145 RTGSCKFGVACKFHHPQ----PSSLGTALPLTG--------NASLGS--MG------SSV 184
+TG CKFG CKFHHP+ P + G PL ASL + MG S
Sbjct: 80 KTGQCKFGTTCKFHHPEFGGVPMTPGIYPPLQSPSIASPHPYASLANWQMGRPPVVPGSY 139
Query: 185 LPSS---GLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRNQGDLG----A 233
+P S + +G++P GW+ Y ++ P+ + A N+ +Y + G
Sbjct: 140 IPGSYTPMMLSSGMIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGHHGSSSTIAYG 198
Query: 234 GAQMHILSASSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 285
G + S++ Q+ PERP QPDC+YYM TG CK+GA CK+HHP+E A +
Sbjct: 199 GPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSG 258
Query: 286 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
+ L LP RPG C+ Y+ G C++G C++DHP + Y S PLS +
Sbjct: 259 YMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 311
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
Q PER GQPDC YY++TG CK+G+TCKYHHP++ + N L LP+R +
Sbjct: 215 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 274
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLG---TALPLT 172
C YY + G C++GVACK+ HP +LG +ALPL+
Sbjct: 275 CAYYAQNGYCRYGVACKYDHPM-GTLGYSPSALPLS 309
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 227 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS 286
+ + G GA+ +A++ + PER QP C YYM TGTCK+G +CK+HHPK+ A
Sbjct: 5 DSANFGGGAR----NAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQDGAVLPVM 60
Query: 287 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPL 337
+ G P R G+ CS Y G CKFG TC+F HP + G P+ G+ PPL
Sbjct: 61 -LNNSGFPIRLGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMTPGI-YPPL 110
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 220 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 279
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 280 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 313
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
G G + L P R + C YYM+TG+CKFG CK+HHP+ G LP+ N S
Sbjct: 10 GGGARNAAALDYPERAGQPICEYYMKTGTCKFGTNCKYHHPKQD--GAVLPVMLNNS 64
>gi|224109138|ref|XP_002315096.1| predicted protein [Populus trichocarpa]
gi|222864136|gb|EEF01267.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 185 bits (469), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/349 (32%), Positives = 163/349 (46%), Gaps = 77/349 (22%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--- 85
I D +E +A + +P RPGEPDC ++ +T C YG NC+FNHP
Sbjct: 203 IPDWKEVPLIATSETFPERPGEPDCPYFLKTQRCKYGLNCKFNHPKEKLSLGDSENSSVS 262
Query: 86 -LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD----------RNGA------------- 121
LPER +P C +Y+KTG CK+G++CK+HHPKD NG
Sbjct: 263 ALPERPSEPPCAFYMKTGKCKFGASCKFHHPKDIQIPLSGLGNDNGVQTDSVVKNEGITG 322
Query: 122 ------GPVS----FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL 171
PV+ N GLP+R E CP+Y++TGSCK+G C+++HP+ +++
Sbjct: 323 DVDVIYSPVTPALHHNSKGLPIRLGEVDCPFYLKTGSCKYGATCRYNHPERTAI------ 376
Query: 172 TGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDL 231
N ++G ++ AP N G +P + IY + +
Sbjct: 377 --NPPAAAIGHPIV------------APSLANL--NFGVFNPAAS-----IYQTID---- 411
Query: 232 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA------QSAA 285
++ +L P+RP Q +C +YM TG CK+G CKFHHP +R A Q
Sbjct: 412 ---PRLSMLGVGPTFYPQRPGQTECDFYMKTGECKFGERCKFHHPIDRSAPTEKQIQQQT 468
Query: 286 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 334
+ GLP R G C Y G CK+G TC+FDHP G + SL
Sbjct: 469 VKLTLAGLPRREGAVHCPYYMKTGACKYGATCKFDHPPPGEVMAVATSL 517
Score = 115 bits (287), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 96/227 (42%), Gaps = 58/227 (25%)
Query: 3 DNRQVKSNAVANQSADNIEEAIW---RLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRT 59
DN + V N+ + I+ +H N +G P R GE DC FY +T
Sbjct: 306 DNGVQTDSVVKNEGITGDVDVIYSPVTPALHHNSKG--------LPIRLGEVDCPFYLKT 357
Query: 60 GLCGYGSNCRFNHPAYAA--------------------------------QGAQYREEL- 86
G C YG+ CR+NHP A Q R +
Sbjct: 358 GSCKYGATCRYNHPERTAINPPAAAIGHPIVAPSLANLNFGVFNPAASIYQTIDPRLSML 417
Query: 87 -------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-------AGPVSFNILGLP 132
P+R GQ +C +Y+KTG CK+G CK+HHP DR+ V + GLP
Sbjct: 418 GVGPTFYPQRPGQTECDFYMKTGECKFGERCKFHHPIDRSAPTEKQIQQQTVKLTLAGLP 477
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS 179
R+ CPYYM+TG+CK+G CKF HP P + A LG+
Sbjct: 478 RREGAVHCPYYMKTGACKYGATCKFDHPPPGEVMAVATSLDAAVLGA 524
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 14/85 (16%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIGPLGLPSRP 297
P+RP + DC +YM T TCK+G CKF HP + + A S P RP
Sbjct: 167 PQRPGEKDCAHYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPLIATSET----FPERP 222
Query: 298 GQAICSNYSMYGICKFGPTCRFDHP 322
G+ C + CK+G C+F+HP
Sbjct: 223 GEPDCPYFLKTQRCKYGLNCKFNHP 247
>gi|449461124|ref|XP_004148293.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like
[Cucumis sativus]
Length = 527
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 119/351 (33%), Positives = 169/351 (48%), Gaps = 84/351 (23%)
Query: 19 NIEEAIWRLK--IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
+ IW + I D +E +A + P R G+PDC ++ +T C +GS C+FNHP
Sbjct: 183 KFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDR 242
Query: 77 AQ--GAQYRE--ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD--------------- 117
+ GA+ + LPER +P C +Y+KTG CK+G CK+HHPKD
Sbjct: 243 SDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQT 302
Query: 118 -----RNGAG-------PVSF------NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
AG P+S N GLP+R E CP+Y++TGSCK+G C+++H
Sbjct: 303 LMVKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNH 362
Query: 160 PQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGS 219
P +++ + P + + +V NT G + P S
Sbjct: 363 PDRNAINPSTP------------------AMVHPAMVSTANMNT--GFVNP--------S 394
Query: 220 NLIYSSRN----QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 275
N IY + + Q LG+G+ ++ P+RP Q +C +YM TG CK+G CKFHH
Sbjct: 395 NAIYQAVDPRLIQPLLGSGSSIY---------PQRPGQIECDFYMKTGDCKFGERCKFHH 445
Query: 276 PKERIA--QSAASNIGPL--GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P +R A Q A N+ GLP R IC Y G CK+G TC+FDHP
Sbjct: 446 PIDRSAPKQGALHNVKLTLAGLPRREEAIICPYYLKTGTCKYGTTCKFDHP 496
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 109/330 (33%), Positives = 149/330 (45%), Gaps = 92/330 (27%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----------QYREELPERNGQP 93
YP RPGE DC Y T C +G +C+F+HP + +G E+LPER G P
Sbjct: 158 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANSEDLPERLGDP 217
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR-NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFG 152
DC Y+LKT CK+GS CK++HPKDR + G + LP R E C +Y++TG+CKFG
Sbjct: 218 DCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPLCAFYVKTGNCKFG 277
Query: 153 VACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG---IVPAPGWNTYMGNIG 209
+ CKFHHP+ + L+G S + ++ + + AG +V P
Sbjct: 278 INCKFHHPKDIQI-----LSGEEYGNSEQTLMVKTE--ERAGDFKLVKPP---------I 321
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 269
LSP A MH +S+ LP RP + DC +Y+ TG+CKYG
Sbjct: 322 SLSP---------------------AIMH----NSKGLPIRPGEVDCPFYLKTGSCKYGT 356
Query: 270 DCKFHHPKER-------------IAQSAASNIGPLG------------------------ 292
C+++HP + +A N G +
Sbjct: 357 TCRYNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPSNAIYQAVDPRLIQPLLGSGSSI 416
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPGQ C Y G CKFG C+F HP
Sbjct: 417 YPQRPGQIECDFYMKTGDCKFGERCKFHHP 446
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 62/169 (36%), Positives = 82/169 (48%), Gaps = 46/169 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------------------- 73
P RPGE DC FY +TG C YG+ CR+NHP
Sbjct: 335 PIRPGEVDCPFYLKTGSCKYGTTCRYNHPDRNAINPSTPAMVHPAMVSTANMNTGFVNPS 394
Query: 74 --AYAAQGAQYREEL--------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
Y A + + L P+R GQ +C +Y+KTG CK+G CK+HHP DR+
Sbjct: 395 NAIYQAVDPRLIQPLLGSGSSIYPQRPGQIECDFYMKTGDCKFGERCKFHHPIDRSAPKQ 454
Query: 124 -----VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 167
V + GLP R++ CPYY++TG+CK+G CKF HP P + T
Sbjct: 455 GALHNVKLTLAGLPRREEAIICPYYLKTGTCKYGTTCKFDHPPPGEVMT 503
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/239 (29%), Positives = 99/239 (41%), Gaps = 72/239 (30%)
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP 186
N+ P R EK C +YM T +CKFG +CKF HP +P
Sbjct: 154 NLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP----------------------IWVP 191
Query: 187 SSGL----QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSR-------NQGDLGAGA 235
G+ + I + +G+ P P + + SR ++ D GA
Sbjct: 192 EGGIPDWKEVPQIANSEDLPERLGD--PDCPYFLKTQRCKFGSRCKFNHPKDRSD-SVGA 248
Query: 236 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK------------------ 277
+ + + +LPERP +P C +Y+ TG CK+G +CKFHHPK
Sbjct: 249 E----KSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLM 304
Query: 278 ----ER----------IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
ER I+ S A GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 305 VKTEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP 363
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 46/93 (49%), Gaps = 17/93 (18%)
Query: 243 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHPK----------ERIAQSAASNIG 289
S+ NLP +RP + DC +YM T TCK+G CKF HP + + Q A S
Sbjct: 151 STSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEVPQIANSE-- 208
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP R G C + CKFG C+F+HP
Sbjct: 209 --DLPERLGDPDCPYFLKTQRCKFGSRCKFNHP 239
>gi|449531215|ref|XP_004172583.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like,
partial [Cucumis sativus]
Length = 205
Score = 180 bits (457), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 123/201 (61%), Gaps = 12/201 (5%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPE 88
N G + + YP RPGEPDC +Y RTGLC +G+ CRFNHP A A+ + E PE
Sbjct: 2 NLGSGEIMGSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMKGEFPE 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTG 147
R GQP+C YYLKTGTCK+G+TCK+HHP+D+ G AG V+ NILG P+R E C YY+RTG
Sbjct: 62 RIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNILGYPLRPSETECAYYLRTG 121
Query: 148 SCKFGVACKFHHPQPSSLGTAL---PLTGNASLGSMGSSVLP--SSGLQYAGIVPAPGW- 201
CKFG CKFHHPQP+++ +L P+ + G P S+ A +P+P W
Sbjct: 122 QCKFGNTCKFHHPQPTNMMVSLRGSPIYPTVQSPTPGQQSYPGGSTNWSRASFIPSPRWQ 181
Query: 202 --NTYMGNIGPLSPTSIAGSN 220
++Y I P S+ G N
Sbjct: 182 GPSSYASLILPQGVLSVPGWN 202
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 60/152 (39%), Positives = 81/152 (53%), Gaps = 17/152 (11%)
Query: 236 QMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER--IAQSAASNIGPLG 292
++ I +A + PER QP+C+YY+ TGTCK+GA CKFHHP+++ IA A NI LG
Sbjct: 47 ELAIATARMKGEFPERIGQPECQYYLKTGTCKFGATCKFHHPRDKAGIAGRVALNI--LG 104
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISA 352
P RP + C+ Y G CKFG TC+F HP P N +S L S + S
Sbjct: 105 YPLRPSETECAYYLRTGQCKFGNTCKFHHP---QPTNMMVS------LRGSPIYPTVQSP 155
Query: 353 THSIETSPDASSKIPNWVQNSDAVSVQHQNPD 384
T ++ P S+ NW + S S + Q P
Sbjct: 156 TPGQQSYPGGST---NWSRASFIPSPRWQGPS 184
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 230 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 288
+LG+G M S + P RP +PDC YY+ TG C++GA C+F+HP R +A + A
Sbjct: 2 NLGSGEIM-----GSGSYPVRPGEPDCSYYIRTGLCRFGATCRFNHPPNRELAIATARMK 56
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
G P R GQ C Y G CKFG TC+F HP
Sbjct: 57 GE--FPERIGQPECQYYLKTGTCKFGATCKFHHP 88
>gi|145331437|ref|NP_001078077.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
gi|330255804|gb|AEC10898.1| zinc finger CCCH domain-containing protein 32 [Arabidopsis
thaliana]
Length = 442
Score = 180 bits (457), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 105/296 (35%), Positives = 146/296 (49%), Gaps = 57/296 (19%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYY 143
+ PER G PDC YY++TG C YG+ C+Y+HP+DR P R E C +Y
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDRASVEATVRATGQYPERFGEPPCQFY 99
Query: 144 MRTGSCKFGVACKFHHPQPSS------------------LGTALP--------------- 170
++TG+CKFG +CKFHHP+ + GT +P
Sbjct: 100 LKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREPAGTTVPPPPASAPQFYPSVQS 159
Query: 171 -----LTGNASLGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSP--- 213
G +S + ++LP S +Q A G+VP PGW+ Y + P LSP
Sbjct: 160 LMPDQYGGPSSSLRVARTLLPGSYMQGAYGPMLLTPGVVPIPGWSPYSAPVSPALSPGAQ 219
Query: 214 -----TSIAGSNLIYSSRNQ--GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
TS+ G + S+ G + + + Q PERP +P+C+YY+ TG CK
Sbjct: 220 HAVGATSLYGVTQLTSTTPSLPGVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCK 279
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+G CKFHHP++R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 280 FGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 335
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Query: 230 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
D G M L S + PERP PDC YYM TG C YG C+++HP++R S + +
Sbjct: 25 DTGLQESMWRLGLGSDSYPERPGAPDCAYYMRTGVCGYGNRCRYNHPRDR--ASVEATVR 82
Query: 290 PLG-LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
G P R G+ C Y G CKFG +C+F HP
Sbjct: 83 ATGQYPERFGEPPCQFYLKTGTCKFGASCKFHHP 116
>gi|218187915|gb|EEC70342.1| hypothetical protein OsI_01241 [Oryza sativa Indica Group]
Length = 385
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 121/337 (35%), Positives = 152/337 (45%), Gaps = 86/337 (25%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA--------QYREELPERNGQPDCG 96
P RPGE DC++Y RTG CGYG NCR+NHP A A + E PER GQP C
Sbjct: 20 PERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPERPGQPVCE 79
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
YY+K GTCK+GS CKY HP++ V N G P+R EK C YY++TG CKFG CK
Sbjct: 80 YYMKNGTCKFGSNCKYDHPRE-GSVQAVMLNSSGYPLRSGEKDCTYYVKTGHCKFGSTCK 138
Query: 157 FHHP---------------QPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA-------- 193
FHHP QP + ++ P A VLP S L +
Sbjct: 139 FHHPEIGGVSETPNMYPPVQPQPISSSHPYQHLAGWQMGRPPVLPGSFLSGSYPPMMLPS 198
Query: 194 GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ 253
+VP GWN Y+ + ++ S G + + R G + L A
Sbjct: 199 TVVPMQGWNPYISPVNQVA--SAGGHQTVQAGRFMAYRTKGLLLQSLMA----------- 245
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
Y+NT PK S PLGLP RPG C+ Y+ +G CKF
Sbjct: 246 -----YLNT-------------PKSNCMLS------PLGLPLRPGSQPCAYYTQHGFCKF 281
Query: 314 GPTCRFDHPY-----------------AGYPINYGLS 333
GPTC+FDHP A YP+NY ++
Sbjct: 282 GPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVA 318
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 4/89 (4%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG----LPSR 296
+ ++ LPERP + DC YY+ TG C YG +C+++HP++R A + + G P R
Sbjct: 13 AVAAGRLPERPGEADCVYYLRTGACGYGENCRYNHPRDRAAAAVLNGGGKTTHSAEYPER 72
Query: 297 PGQAICSNYSMYGICKFGPTCRFDHPYAG 325
PGQ +C Y G CKFG C++DHP G
Sbjct: 73 PGQPVCEYYMKNGTCKFGSNCKYDHPREG 101
>gi|224101283|ref|XP_002312214.1| predicted protein [Populus trichocarpa]
gi|222852034|gb|EEE89581.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 177 bits (450), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 114/327 (34%), Positives = 148/327 (45%), Gaps = 85/327 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----------QYREELPERNGQP 93
YP RPGE DC +Y T C +G C+F+HP + +G E P+R G P
Sbjct: 151 YPQRPGEKDCAYYMLTRTCKFGDTCKFDHPVWVPEGGIPDWKEVPPIATSETFPDRPGVP 210
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKF 151
DC Y+LKT CKYG CK++HPK++ G VS N I LP R E C +YM+TG CKF
Sbjct: 211 DCPYFLKTQRCKYGLNCKFNHPKEKMSLG-VSENTSISALPERPSEPPCAFYMKTGICKF 269
Query: 152 GVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPL 211
G CKFHHP+ + SL G+ G+Q +V G + I L
Sbjct: 270 GATCKFHHPKDIQI----------SLAGQGN----DDGVQTNSVVDNGGITGDVNVIKAL 315
Query: 212 SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADC 271
+ A L +S+ LP RP + DC +Y+ TG+CKYGA C
Sbjct: 316 VSVTPA----------------------LLHNSKGLPMRPGEVDCPFYLKTGSCKYGATC 353
Query: 272 KFHHPKER-------------IAQSAAS-----------------------NIGPLGLPS 295
+++HP+ IA S A+ +GP P
Sbjct: 354 RYNHPERTAINPPAAAIGHPIIAPSMANLNLGVFSPAASIYQTIDPRLSTLGVGPTVYPQ 413
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDHP 322
RPGQA C Y G CKFG TC+F HP
Sbjct: 414 RPGQAECDFYMKTGECKFGETCKFHHP 440
Score = 159 bits (401), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 100/313 (31%), Positives = 142/313 (45%), Gaps = 79/313 (25%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYRE 84
I D +E +A + +P RPG PDC ++ +T C YG NC+FNHP +
Sbjct: 188 IPDWKEVPPIATSETFPDRPGVPDCPYFLKTQRCKYGLNCKFNHPKEKMSLGVSENTSIS 247
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD--------------------RNGAGPV 124
LPER +P C +Y+KTG CK+G+TCK+HHPKD NG
Sbjct: 248 ALPERPSEPPCAFYMKTGICKFGATCKFHHPKDIQISLAGQGNDDGVQTNSVVDNGGITG 307
Query: 125 SFNIL---------------GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
N++ GLPMR E CP+Y++TGSCK+G C+++HP+ +++
Sbjct: 308 DVNVIKALVSVTPALLHNSKGLPMRPGEVDCPFYLKTGSCKYGATCRYNHPERTAI---- 363
Query: 170 PLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQG 229
N ++G ++ S N+G SP A S
Sbjct: 364 ----NPPAAAIGHPIIAPSMANL--------------NLGVFSP---AASIYQTIDPRLS 402
Query: 230 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-- 287
LG G ++ P+RP Q +C +YM TG CK+G CKFHHP +R A +A
Sbjct: 403 TLGVGPTVY---------PQRPGQAECDFYMKTGECKFGETCKFHHPIDRSAPTAKQTEP 453
Query: 288 ----IGPLGLPSR 296
+ GLP R
Sbjct: 454 QTVKLTLAGLPRR 466
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 61/138 (44%), Gaps = 47/138 (34%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------------AYAA 77
P RPGE DC FY +TG C YG+ CR+NHP ++
Sbjct: 330 PMRPGEVDCPFYLKTGSCKYGATCRYNHPERTAINPPAAAIGHPIIAPSMANLNLGVFSP 389
Query: 78 QGAQYRE-------------ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP- 123
+ Y+ P+R GQ +C +Y+KTG CK+G TCK+HHP DR+
Sbjct: 390 AASIYQTIDPRLSTLGVGPTVYPQRPGQAECDFYMKTGECKFGETCKFHHPIDRSAPTAK 449
Query: 124 ------VSFNILGLPMRQ 135
V + GLP R+
Sbjct: 450 QTEPQTVKLTLAGLPRRE 467
>gi|413947010|gb|AFW79659.1| hypothetical protein ZEAMMB73_788382 [Zea mays]
Length = 374
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 115/313 (36%), Positives = 155/313 (49%), Gaps = 56/313 (17%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
YY K GTCK+GS CK+ HP++ +G PV+ N G P+R EK C YYM+TG CKFG CK
Sbjct: 22 YYAKNGTCKFGSNCKFDHPRE-SGFVPVALNNSGFPLRLGEKECSYYMKTGHCKFGGTCK 80
Query: 157 FHHP---------------QPSSLGTALPLTGNASLGSMGSSVLPSSGLQ--------YA 193
FHHP QPS + + P +++ +V+P S L
Sbjct: 81 FHHPELGFLTETPGMYPPVQPSPISSPHPYPHHSNWQMGRPAVVPGSFLPGPYPPMMLPP 140
Query: 194 GIVPAPGWNTYMGNIGPLSPTSIAG-------------------SNLIYSSRNQGDLGAG 234
++P GWN Y + P++ T+ AG S + Y S + L +
Sbjct: 141 TVMPMQGWNPY---VSPMNQTTPAGGQQAVPAGPSYGLSHQEPTSAVTYGS-HYAQLYSS 196
Query: 235 AQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 294
+ + PERP QP+C +YM TGTCKYGA CK+HHP+ + + PLGLP
Sbjct: 197 SGTSSSNIQEYVFPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLP 256
Query: 295 SRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATH 354
RPG C+ Y+ +G CKFGPTC+FDHP G P NY L P SL + H
Sbjct: 257 LRPGSQRCAYYAHHGFCKFGPTCKFDHP-MGTP-NYSLPAP-------SLTDVPVAPYPH 307
Query: 355 SIETSPDASSKIP 367
+ +P A +P
Sbjct: 308 TFSVTPIAPYLLP 320
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 52/79 (65%), Gaps = 5/79 (6%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKSCPY 142
PER GQP+C +Y+KTGTCKYG+ CKYHHP+ +GP S + LGLP+R + C Y
Sbjct: 209 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYF--SGPKSNCILSPLGLPLRPGSQRCAY 266
Query: 143 YMRTGSCKFGVACKFHHPQ 161
Y G CKFG CKF HP
Sbjct: 267 YAHHGFCKFGPTCKFDHPM 285
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C Y +TG C YG+ C+++HP Y + LP R G C YY
Sbjct: 209 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQRCAYYA 268
Query: 100 KTGTCKYGSTCKYHHP 115
G CK+G TCK+ HP
Sbjct: 269 HHGFCKFGPTCKFDHP 284
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 257 RYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
+YY GTCK+G++CKF HP+E A N G P R G+ CS Y G CKFG T
Sbjct: 21 QYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLGEKECSYYMKTGHCKFGGT 78
Query: 317 CRFDHPYAGY 326
C+F HP G+
Sbjct: 79 CKFHHPELGF 88
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 28 KIHDNQEGGGVAQA---SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K +E G V A S +P R GE +C +Y +TG C +G C+F+HP
Sbjct: 36 KFDHPRESGFVPVALNNSGFPLRLGEKECSYYMKTGHCKFGGTCKFHHP 84
>gi|168028390|ref|XP_001766711.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682143|gb|EDQ68564.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 323
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 105/307 (34%), Positives = 151/307 (49%), Gaps = 65/307 (21%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA-AQGAQYR-EELPERNGQPDCGYYLKT 101
YP RPGE C +Y T C +G CR++HPA+ A G LP+R +PDC Y++KT
Sbjct: 1 YPQRPGEKVCAYYMITRTCSFGVTCRYDHPAWVTAVGTPVDPSSLPQRPTEPDCAYFMKT 60
Query: 102 GTCKYGSTCKYHHPKDR-------------NGAGPV----SFNILGLPMRQDEKSCPYYM 144
G C+YGS C+++HPK++ N A P+ +FN GLP+R E +C +Y
Sbjct: 61 GECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPINPATTFNSKGLPLRPGEGNCVFYG 120
Query: 145 RTGSCKFGVACKFHHPQPSSLGTALP-LTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNT 203
+TGSCK+G AC+++HP+ LP ++G A+ + +S A N
Sbjct: 121 KTGSCKYGTACRYNHPE-----ILLPDVSGQATTADYAYTSTQNSQEYAYAAAQAYHQN- 174
Query: 204 YMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG 263
++P +A L + P+RP +PDC +Y+ TG
Sbjct: 175 -------VTPMYVASMGLPH------------------------PQRPGEPDCTFYIKTG 203
Query: 264 TCKYGADCKFHHPKERI--------AQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +GA CKFHHP +RI A + GLP R + C+ Y G CKFG
Sbjct: 204 ECSFGATCKFHHPPDRIPSGIPKPAKNQATVKLSLAGLPRRETETPCAYYMKTGACKFGQ 263
Query: 316 TCRFDHP 322
TC++DHP
Sbjct: 264 TCKYDHP 270
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 64/168 (38%), Positives = 85/168 (50%), Gaps = 47/168 (27%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------------YAAQGAQYREEL---- 86
P RPGE +C+FY +TG C YG+ CR+NHP YA Q +E
Sbjct: 108 PLRPGEGNCVFYGKTGSCKYGTACRYNHPEILLPDVSGQATTADYAYTSTQNSQEYAYAA 167
Query: 87 --------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---- 122
P+R G+PDC +Y+KTG C +G+TCK+HHP DR +G
Sbjct: 168 AQAYHQNVTPMYVASMGLPHPQRPGEPDCTFYIKTGECSFGATCKFHHPPDRIPSGIPKP 227
Query: 123 -----PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
V ++ GLP R+ E C YYM+TG+CKFG CK+ HP P +
Sbjct: 228 AKNQATVKLSLAGLPRRETETPCAYYMKTGACKFGQTCKYDHPPPQEI 275
Score = 100 bits (250), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 85/190 (44%), Gaps = 56/190 (29%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE---------- 85
G S P RP EPDC ++ +TG C YGS CRFNHP + + E+
Sbjct: 37 GTPVDPSSLPQRPTEPDCAYFMKTGECRYGSKCRFNHPKEKLESSNTDEQSSVVNQAAPI 96
Query: 86 ----------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPK----DRNGAG--------- 122
LP R G+ +C +Y KTG+CKYG+ C+Y+HP+ D +G
Sbjct: 97 NPATTFNSKGLPLRPGEGNCVFYGKTGSCKYGTACRYNHPEILLPDVSGQATTADYAYTS 156
Query: 123 --------------------PVSFNILGL--PMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P+ +GL P R E C +Y++TG C FG CKFHHP
Sbjct: 157 TQNSQEYAYAAAQAYHQNVTPMYVASMGLPHPQRPGEPDCTFYIKTGECSFGATCKFHHP 216
Query: 161 QPSSLGTALP 170
P + + +P
Sbjct: 217 -PDRIPSGIP 225
Score = 81.3 bits (199), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 49/85 (57%), Gaps = 12/85 (14%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNH---------PAYAAQGAQYREE---LPERN 90
P+P RPGEPDC FY +TG C +G+ C+F+H P A A + LP R
Sbjct: 186 PHPQRPGEPDCTFYIKTGECSFGATCKFHHPPDRIPSGIPKPAKNQATVKLSLAGLPRRE 245
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHP 115
+ C YY+KTG CK+G TCKY HP
Sbjct: 246 TETPCAYYMKTGACKFGQTCKYDHP 270
>gi|218188663|gb|EEC71090.1| hypothetical protein OsI_02867 [Oryza sativa Indica Group]
Length = 463
Score = 175 bits (444), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 164/347 (47%), Gaps = 69/347 (19%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG--------AQYREELPERNGQPDC 95
YP RPGE DC FY T C +G +C+F+HP + +G A E PE+ G+PDC
Sbjct: 104 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEESYPEQQGEPDC 163
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGA---GPVSFNIL-----GLPMRQDEKSCPYYMRTG 147
+++KTG CK+GS CK++HPK++ A G + L LP+R E C +Y +TG
Sbjct: 164 PFFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDKHLIADSSILPVRPSEPLCSFYAKTG 223
Query: 148 SCKFGVACKFHHPQ----PSSLG---TALPLTGNASLGSMGSSV-----LPSSGLQY--- 192
CKF CKF+HP+ PSS +A+ + G +GS SV P + Q
Sbjct: 224 KCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNS 283
Query: 193 AGIVPAPG-----WNTYMGNIG-------------------PLSPTSIAG--SNLIYSSR 226
G+ PG + MG+ PL T + S L+ SS
Sbjct: 284 KGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSA 343
Query: 227 N--QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 284
N QG A M + P+RP C +YM TG CK+ CKFHHP +R A
Sbjct: 344 NFMQGFDFHAAHMPV-GPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDP 402
Query: 285 ASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++N P GLP R +C+ Y G+CKFG C+FDHP
Sbjct: 403 SANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 449
Score = 138 bits (347), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 103/325 (31%), Positives = 137/325 (42%), Gaps = 67/325 (20%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--- 85
I + +E V ++ YP + GEPDC F+ +TG C +GS C+FNHP +
Sbjct: 141 IPNWKEAANVEES--YPEQQGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDK 198
Query: 86 --------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR------------------- 118
LP R +P C +Y KTG CK+ + CK++HPKD
Sbjct: 199 HLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGET 258
Query: 119 ---NGAGPVS------------FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
+ A VS FN GLPMR E CP+YM+ GSCKFG C+F+HP
Sbjct: 259 DIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRL 318
Query: 164 SLGTALPLTGNASLGSMGSSVLPSSG-------LQYAGIVPAPGWNTYMGNIGPLSPTSI 216
L LPL G L + S +L SS A + PG TY G
Sbjct: 319 VLNFPLPL-GQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFY 377
Query: 217 AGSNLIYSS----------RNQGDLGAGAQ--MHILSASSQNLPERPDQPDCRYYMNTGT 264
+ + R+ D A + + + LP R D C +YM TG
Sbjct: 378 MKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGV 437
Query: 265 CKYGADCKFHHPKERIAQSAASNIG 289
CK+G CKF HP + A + SN G
Sbjct: 438 CKFGMQCKFDHPPPQEAIAKVSNSG 462
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ 191
P R EK C +YM T +CKFG +CKF HPQ +P G + + + S +
Sbjct: 105 PQRPGEKDCAFYMMTRTCKFGGSCKFDHPQ------WVPEGGIPNWKEAAN--VEESYPE 156
Query: 192 YAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 251
G P + G S N N G H++ A S LP RP
Sbjct: 157 QQGEPDCP----FFMKTGKCKFGSKCKFNHPKEKVNALASGKTNDKHLI-ADSSILPVRP 211
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKE--------------------------------- 278
+P C +Y TG CK+ A CKF+HPK+
Sbjct: 212 SEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKM 271
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---YAGYPINYGLSLP 335
+ +AA GLP RPG+ C Y G CKFG TCRF+HP +P+ G ++
Sbjct: 272 QTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTIL 331
Query: 336 PLSILDSSLMNHQA 349
P +S L+N A
Sbjct: 332 PTP--ESMLLNSSA 343
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-----QSAASNIGPLGLP 294
L +S P+RP + DC +YM T TCK+G CKF HP+ A+N+ P
Sbjct: 97 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEE-SYP 155
Query: 295 SRPGQAICSNYSMYGICKFGPTCRFDHP 322
+ G+ C + G CKFG C+F+HP
Sbjct: 156 EQQGEPDCPFFMKTGKCKFGSKCKFNHP 183
>gi|115438594|ref|NP_001043577.1| Os01g0616400 [Oryza sativa Japonica Group]
gi|54290411|dbj|BAD61281.1| zinc finger protein 3-like [Oryza sativa Japonica Group]
gi|113533108|dbj|BAF05491.1| Os01g0616400 [Oryza sativa Japonica Group]
gi|215767326|dbj|BAG99554.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222618856|gb|EEE54988.1| hypothetical protein OsJ_02611 [Oryza sativa Japonica Group]
Length = 461
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 121/347 (34%), Positives = 164/347 (47%), Gaps = 69/347 (19%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG--------AQYREELPERNGQPDC 95
YP RPGE DC FY T C +G +C+F+HP + +G A E PE+ G+PDC
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEESYPEQEGEPDC 161
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGA---GPVSFNIL-----GLPMRQDEKSCPYYMRTG 147
+++KTG CK+GS CK++HPK++ A G + L LP+R E C +Y +TG
Sbjct: 162 PFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKTG 221
Query: 148 SCKFGVACKFHHPQ----PSSLG---TALPLTGNASLGSMGSSV-----LPSSGLQY--- 192
CKF CKF+HP+ PSS +A+ + G +GS SV P + Q
Sbjct: 222 KCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFNS 281
Query: 193 AGIVPAPG-----WNTYMGNIG-------------------PLSPTSIAG--SNLIYSSR 226
G+ PG + MG+ PL T + S L+ SS
Sbjct: 282 KGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSSA 341
Query: 227 N--QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 284
N QG A M + P+RP C +YM TG CK+ CKFHHP +R A
Sbjct: 342 NFMQGFDFHAAHMPV-GPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPDP 400
Query: 285 ASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++N P GLP R +C+ Y G+CKFG C+FDHP
Sbjct: 401 SANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 447
Score = 137 bits (346), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 105/325 (32%), Positives = 140/325 (43%), Gaps = 67/325 (20%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYR 83
I + +E V ++ YP + GEPDC F+ +TG C +GS C+FNHP A A+ +
Sbjct: 139 IPNWKEAANVEES--YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDK 196
Query: 84 EE------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR------------------- 118
LP R +P C +Y KTG CK+ + CK++HPKD
Sbjct: 197 HLIADSSILPVRPSEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGET 256
Query: 119 ---NGAGPVS------------FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
+ A VS FN GLPMR E CP+YM+ GSCKFG C+F+HP
Sbjct: 257 DIGSAADSVSAKMQTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRL 316
Query: 164 SLGTALPLTGNASLGSMGSSVLPSSG-------LQYAGIVPAPGWNTYMGNIGPLSPTSI 216
L LPL G L + S +L SS A + PG TY G
Sbjct: 317 VLNFPLPL-GQTILPTPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFY 375
Query: 217 AGSNLIYSS----------RNQGDLGAGAQ--MHILSASSQNLPERPDQPDCRYYMNTGT 264
+ + R+ D A + + + LP R D C +YM TG
Sbjct: 376 MKTGFCKFADRCKFHHPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGV 435
Query: 265 CKYGADCKFHHPKERIAQSAASNIG 289
CK+G CKF HP + A + SN G
Sbjct: 436 CKFGMQCKFDHPPPQEAIAKVSNSG 460
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 103/254 (40%), Gaps = 51/254 (20%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ 191
P R EK C +YM T +CKFG +CKF HPQ +P G + + + S +
Sbjct: 103 PQRPGEKDCAFYMMTRTCKFGGSCKFDHPQ------WVPEGGIPNWKEAAN--VEESYPE 154
Query: 192 YAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 251
G P + G S N N G H++ A S LP RP
Sbjct: 155 QEGEPDCP----FFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLI-ADSSILPVRP 209
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKE--------------------------------- 278
+P C +Y TG CK+ A CKF+HPK+
Sbjct: 210 SEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKM 269
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---YAGYPINYGLSLP 335
+ +AA GLP RPG+ C Y G CKFG TCRF+HP +P+ G ++
Sbjct: 270 QTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTIL 329
Query: 336 PLSILDSSLMNHQA 349
P +S L+N A
Sbjct: 330 PTP--ESMLLNSSA 341
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 6/88 (6%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA-----QSAASNIGPLGLP 294
L +S P+RP + DC +YM T TCK+G CKF HP+ A+N+ P
Sbjct: 95 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEAANVEE-SYP 153
Query: 295 SRPGQAICSNYSMYGICKFGPTCRFDHP 322
+ G+ C + G CKFG C+F+HP
Sbjct: 154 EQEGEPDCPFFMKTGKCKFGSKCKFNHP 181
>gi|205688147|sp|Q5ZDJ6.2|C3H8_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 8;
Short=OsC3H8
gi|54290410|dbj|BAD61280.1| zinc finger protein 3-like [Oryza sativa Japonica Group]
gi|215767138|dbj|BAG99366.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 462
Score = 174 bits (441), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 121/348 (34%), Positives = 164/348 (47%), Gaps = 70/348 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG---------AQYREELPERNGQPD 94
YP RPGE DC FY T C +G +C+F+HP + +G A E PE+ G+PD
Sbjct: 102 YPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEESYPEQEGEPD 161
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGA---GPVSFNIL-----GLPMRQDEKSCPYYMRT 146
C +++KTG CK+GS CK++HPK++ A G + L LP+R E C +Y +T
Sbjct: 162 CPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSEPLCSFYAKT 221
Query: 147 GSCKFGVACKFHHPQ----PSSLG---TALPLTGNASLGSMGSSV-----LPSSGLQY-- 192
G CKF CKF+HP+ PSS +A+ + G +GS SV P + Q
Sbjct: 222 GKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQTPVAAAQEFN 281
Query: 193 -AGIVPAPG-----WNTYMGNIG-------------------PLSPTSIAG--SNLIYSS 225
G+ PG + MG+ PL T + S L+ SS
Sbjct: 282 SKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTILPTPESMLLNSS 341
Query: 226 RN--QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 283
N QG A M + P+RP C +YM TG CK+ CKFHHP +R A
Sbjct: 342 ANFMQGFDFHAAHMPV-GPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFHHPIDRSAPD 400
Query: 284 AASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++N P GLP R +C+ Y G+CKFG C+FDHP
Sbjct: 401 PSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHP 448
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/310 (32%), Positives = 133/310 (42%), Gaps = 65/310 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-----AYAAQGAQYREE------LPERNGQ 92
YP + GEPDC F+ +TG C +GS C+FNHP A A+ + LP R +
Sbjct: 153 YPEQEGEPDCPFFMKTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLIADSSILPVRPSE 212
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDR----------------------NGAGPVS----- 125
P C +Y KTG CK+ + CK++HPKD + A VS
Sbjct: 213 PLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKMQT 272
Query: 126 -------FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
FN GLPMR E CP+YM+ GSCKFG C+F+HP L LPL G L
Sbjct: 273 PVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPL-GQTILP 331
Query: 179 SMGSSVLPSSG-------LQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSS------ 225
+ S +L SS A + PG TY G + +
Sbjct: 332 TPESMLLNSSANFMQGFDFHAAHMPVGPGPVTYPQRPGATVCDFYMKTGFCKFADRCKFH 391
Query: 226 ----RNQGDLGAGAQ--MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
R+ D A + + + LP R D C +YM TG CK+G CKF HP +
Sbjct: 392 HPIDRSAPDPSANWEPAEESVQLTLAGLPRREDAVVCAFYMKTGVCKFGMQCKFDHPPPQ 451
Query: 280 IAQSAASNIG 289
A + SN G
Sbjct: 452 EAIAKVSNSG 461
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 104/254 (40%), Gaps = 50/254 (19%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ 191
P R EK C +YM T +CKFG +CKF HPQ +P G + ++V S Q
Sbjct: 103 PQRPGEKDCAFYMMTRTCKFGGSCKFDHPQ------WVPEGGIPNWKEQAANVEESYPEQ 156
Query: 192 YAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 251
P +M G S N N G H++ A S LP RP
Sbjct: 157 EG----EPDCPFFM-KTGKCKFGSKCKFNHPKEKVNALASGNTNDKHLI-ADSSILPVRP 210
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKE--------------------------------- 278
+P C +Y TG CK+ A CKF+HPK+
Sbjct: 211 SEPLCSFYAKTGKCKFRAMCKFNHPKDIEIPSSQNEPESAVTVEGETDIGSAADSVSAKM 270
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---YAGYPINYGLSLP 335
+ +AA GLP RPG+ C Y G CKFG TCRF+HP +P+ G ++
Sbjct: 271 QTPVAAAQEFNSKGLPMRPGEVDCPFYMKMGSCKFGSTCRFNHPDRLVLNFPLPLGQTIL 330
Query: 336 PLSILDSSLMNHQA 349
P +S L+N A
Sbjct: 331 PTP--ESMLLNSSA 342
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 46/94 (48%), Gaps = 17/94 (18%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP-----------KERIAQSAASNI 288
L +S P+RP + DC +YM T TCK+G CKF HP KE+ A S
Sbjct: 95 LESSLPIYPQRPGEKDCAFYMMTRTCKFGGSCKFDHPQWVPEGGIPNWKEQAANVEES-- 152
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P + G+ C + G CKFG C+F+HP
Sbjct: 153 ----YPEQEGEPDCPFFMKTGKCKFGSKCKFNHP 182
>gi|77554314|gb|ABA97110.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|215767051|dbj|BAG99279.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222616906|gb|EEE53038.1| hypothetical protein OsJ_35760 [Oryza sativa Japonica Group]
Length = 528
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 140/281 (49%), Gaps = 37/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 230 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 289
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPSSG----- 189
CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P++
Sbjct: 290 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 349
Query: 190 ---------------------LQYAGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 227
L G+ P P WN Y + P P + + + N
Sbjct: 350 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 409
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 410 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 467
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 468 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 508
Score = 74.7 bits (182), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPS 187
P R E C YY++ GSC+FG+ CKF+HP + S + + +G+ S +
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSP 164
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPT---SIAGS-----NLIYSSRNQGDLGAG----A 235
Q P + +Y+ +I P + + GS N S D+ G
Sbjct: 165 DDEQ----APKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPK 220
Query: 236 QMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLG 292
++ + + + E Q +C+YY G CK+G CK+ H KE + ++ LG
Sbjct: 221 ELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLG 280
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RPG+ C Y G CK+ C+F HP
Sbjct: 281 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 429 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 488
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 489 GVCKFGPACAYNHP 502
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.1 bits (105), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 282 PLRPGEKECPYYMRTGSCKYATNCKFHHP 310
>gi|218186661|gb|EEC69088.1| hypothetical protein OsI_37978 [Oryza sativa Indica Group]
Length = 529
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 140/281 (49%), Gaps = 37/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 231 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 290
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPSSG----- 189
CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P++
Sbjct: 291 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 350
Query: 190 ---------------------LQYAGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 227
L G+ P P WN Y + P P + + + N
Sbjct: 351 RTVNEHHLPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 410
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 411 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 468
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 469 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 509
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 190
P R E C YY++ GSC+FG+ CKF+HP G + G SS +S
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSP 164
Query: 191 QYAGIVPAPGWNTYMGNIGPLSPT---SIAGS-----NLIYSSRNQGDLGAG----AQMH 238
P + +Y+ +I P + + GS N S D+ G ++
Sbjct: 165 DDEQQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKELK 224
Query: 239 ILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPS 295
+ + + E Q +C+YY G CK+G CK+ H KE + ++ LGLP
Sbjct: 225 VAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPL 284
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDHP 322
RPG+ C Y G CK+ C+F HP
Sbjct: 285 RPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 430 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 489
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 490 GVCKFGPACAYNHP 503
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 10/87 (11%)
Query: 195 IVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ-NLPERPD 252
++P P GW P +AG + + G++ + + +A S+ P RP
Sbjct: 59 LLPKPTGWED--------GPVVVAGDEVSGGEKLPGEVASAVGVEGAAADSRPRFPRRPG 110
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKER 279
+PDC YY+ G+C++G CKF+HP +
Sbjct: 111 EPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 26/41 (63%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
A R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 98 AADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 45.4 bits (106), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 8/53 (15%)
Query: 278 ERIAQSAASNIGPLG--------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
E++ AS +G G P RPG+ C+ Y +G C+FG C+F+HP
Sbjct: 82 EKLPGEVASAVGVEGAAADSRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHP 134
>gi|115488164|ref|NP_001066569.1| Os12g0278800 [Oryza sativa Japonica Group]
gi|122204937|sp|Q2QTY2.1|C3H65_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 65;
Short=OsC3H65
gi|77554313|gb|ABA97109.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
gi|113649076|dbj|BAF29588.1| Os12g0278800 [Oryza sativa Japonica Group]
Length = 529
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 140/281 (49%), Gaps = 37/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 231 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 290
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPSSG----- 189
CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P++
Sbjct: 291 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 350
Query: 190 ---------------------LQYAGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 227
L G+ P P WN Y + P P + + + N
Sbjct: 351 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 410
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 411 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 468
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 469 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 509
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 15/207 (7%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 190
P R E C YY++ GSC+FG+ CKF+HP G + G SS +S
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSP 164
Query: 191 QYAGIVPAPGWNTYMGNIGPLSPT---SIAGS-----NLIYSSRNQGDLGAG----AQMH 238
P + +Y+ +I P + + GS N S D+ G ++
Sbjct: 165 DDEQQAPKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPKELK 224
Query: 239 ILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPS 295
+ + + E Q +C+YY G CK+G CK+ H KE + ++ LGLP
Sbjct: 225 VAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPL 284
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDHP 322
RPG+ C Y G CK+ C+F HP
Sbjct: 285 RPGEKECPYYMRTGSCKYATNCKFHHP 311
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 430 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 489
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 490 GVCKFGPACAYNHP 503
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.1 bits (105), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 283 PLRPGEKECPYYMRTGSCKYATNCKFHHP 311
>gi|77554315|gb|ABA97111.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 508
Score = 171 bits (434), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 99/281 (35%), Positives = 140/281 (49%), Gaps = 37/281 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 210 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 269
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPSSG----- 189
CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P++
Sbjct: 270 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 329
Query: 190 ---------------------LQYAGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 227
L G+ P P WN Y + P P + + + N
Sbjct: 330 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 389
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 390 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 447
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
+ PLGLP +P Q +C+ Y YG+CKFGP C ++HP+ P+
Sbjct: 448 LSPLGLPIKPDQPVCTYYGRYGVCKFGPACAYNHPFNFSPV 488
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 86/197 (43%), Gaps = 16/197 (8%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPS 187
P R E C YY++ GSC+FG+ CKF+HP + S + + +G+ S +
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSP 164
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL 247
Q P + +Y+ +I P + I + + + +S S
Sbjct: 165 DDEQ----APKEEYGSYVPDISPEVDSLIIDVKKGRVEPKELKVAKEKRKEFISEGS--- 217
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 305
Q +C+YY G CK+G CK+ H KE + ++ LGLP RPG+ C Y
Sbjct: 218 ----SQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKECPYY 273
Query: 306 SMYGICKFGPTCRFDHP 322
G CK+ C+F HP
Sbjct: 274 MRTGSCKYATNCKFHHP 290
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELPERNGQPDCGYYLKT 101
YP RPG+P+C + ++G C + C+++HP GA LP + QP C YY +
Sbjct: 409 YPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGALSPLGLPIKPDQPVCTYYGRY 468
Query: 102 GTCKYGSTCKYHHP 115
G CK+G C Y+HP
Sbjct: 469 GVCKFGPACAYNHP 482
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 262 PLRPGEKECPYYMRTGSCKYATNCKFHHP 290
>gi|357478675|ref|XP_003609623.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510678|gb|AES91820.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 582
Score = 171 bits (433), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 129/358 (36%), Positives = 170/358 (47%), Gaps = 45/358 (12%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP RP E DC++Y RTG CGYGS CRFNHP A+ E PER GQP C YY +
Sbjct: 43 YPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYAR 102
Query: 101 TGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
TG+CK+G++CKYHHP+ G P VS N G P+R EK C YY++TG CKFG CKFHH
Sbjct: 103 TGSCKFGASCKYHHPRQAAGTTPPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHH 162
Query: 160 PQPS--SLGTALPLTGNASL-----GSMGSSVLPSSG---LQYAGIVPAPGWNTYMGNIG 209
PQP+ + P+ + L + +V P SG QY +V P G
Sbjct: 163 PQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQPPSGPSQQQYGVLVARPPLLHGSFVQG 222
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQM----HILSASSQNL---PERPDQPDCRYYMNT 262
P P ++ + + +S + AG+ + + LS S L + P + +
Sbjct: 223 PYGPMVMSPTMVPFSGWSPYQAPAGSPVLPSSNPLSVGSTQLYGITQLPSPTTAYTQLPS 282
Query: 263 GTCKYGADCKFHHPKERIAQSAASNIGPL-----------------GLPSRPGQAICSNY 305
T Y + P QS+ + GP LP RP Q C +Y
Sbjct: 283 PTTAYTGPYQSSGPSAGPYQSSGPSAGPYQSSGPSTGPSGSSQKEHSLPERPDQQECQHY 342
Query: 306 SMYGICKFGPTCRFDH-PYAGYP-INY---GLSLPPLSILDSSLMNHQAISATHSIET 358
G CKFG TCR+ H P G P +N GL L PL + L++ A + H I T
Sbjct: 343 MKTGDCKFGSTCRYHHPPDMGAPKVNLSPIGLPLRPLMLFRCILLH--ASTKPHIILT 398
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 56/126 (44%), Gaps = 46/126 (36%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--- 297
S +LPERPDQ +C++YM TG CK+G+ C++HHP + A N+ P+GLP RP
Sbjct: 324 SQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDMGAPKV--NLSPIGLPLRPLML 381
Query: 298 -----------------------------------------GQAICSNYSMYGICKFGPT 316
G C++Y+ G CKFG
Sbjct: 382 FRCILLHASTKPHIILTWLFVFIDLFGFISPLMQYFVFGLQGAQPCTHYTQRGFCKFGSA 441
Query: 317 CRFDHP 322
C+FDHP
Sbjct: 442 CKFDHP 447
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 45/125 (36%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMR----- 134
+Q LPER Q +C +Y+KTG CK+GSTC+YHHP D GA V+ + +GLP+R
Sbjct: 324 SQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDM-GAPKVNLSPIGLPLRPLMLF 382
Query: 135 ---------------------------------------QDEKSCPYYMRTGSCKFGVAC 155
Q + C +Y + G CKFG AC
Sbjct: 383 RCILLHASTKPHIILTWLFVFIDLFGFISPLMQYFVFGLQGAQPCTHYTQRGFCKFGSAC 442
Query: 156 KFHHP 160
KF HP
Sbjct: 443 KFDHP 447
>gi|357478677|ref|XP_003609624.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355510679|gb|AES91821.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 379
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/317 (36%), Positives = 152/317 (47%), Gaps = 38/317 (11%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNGQPDCGYYLK 100
YP RP E DC++Y RTG CGYGS CRFNHP A+ E PER GQP C YY +
Sbjct: 43 YPQRPDEADCIYYLRTGFCGYGSRCRFNHPRDRGAVIGAARIAGEYPERVGQPVCQYYAR 102
Query: 101 TGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
TG+CK+G++CKYHHP+ G P VS N G P+R EK C YY++TG CKFG CKFHH
Sbjct: 103 TGSCKFGASCKYHHPRQAAGTTPPVSLNCYGYPLRVGEKECSYYVKTGQCKFGATCKFHH 162
Query: 160 PQPS--SLGTALPLTGNASL-----GSMGSSVLPSSG---LQYAGIVPAPGWNTYMGNIG 209
PQP+ + P+ + L + +V P SG QY +V P G
Sbjct: 163 PQPAGGQMIAPSPVPQVSPLPMPVPSPIYQTVQPPSGPSQQQYGVLVARPPLLHGSFVQG 222
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQM----HILSASSQNL---PERPDQPDCRYYMNT 262
P P ++ + + +S + AG+ + + LS S L + P + +
Sbjct: 223 PYGPMVMSPTMVPFSGWSPYQAPAGSPVLPSSNPLSVGSTQLYGITQLPSPTTAYTQLPS 282
Query: 263 GTCKYGADCKFHHPKERIAQSAASNIGPL-----------------GLPSRPGQAICSNY 305
T Y + P QS+ + GP LP RP Q C +Y
Sbjct: 283 PTTAYTGPYQSSGPSAGPYQSSGPSAGPYQSSGPSTGPSGSSQKEHSLPERPDQQECQHY 342
Query: 306 SMYGICKFGPTCRFDHP 322
G CKFG TCR+ HP
Sbjct: 343 MKTGDCKFGSTCRYHHP 359
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMR 134
+Q LPER Q +C +Y+KTG CK+GSTC+YHHP D GA V+ + +GLP+R
Sbjct: 324 SQKEHSLPERPDQQECQHYMKTGDCKFGSTCRYHHPPDM-GAPKVNLSPIGLPLR 377
>gi|326489471|dbj|BAK01716.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 103/307 (33%), Positives = 148/307 (48%), Gaps = 40/307 (13%)
Query: 69 RFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH---PKDRNGAGPVS 125
+FN +E + E Q +C YY G CK+G +C+Y H + + V
Sbjct: 175 KFNETEQKVAKENRKETVSEGTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVE 234
Query: 126 FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVL 185
N LGLP+R K CPYYMRTGSCKF C+FHHP P+++ + PL + + +V
Sbjct: 235 LNFLGLPLRPGGKECPYYMRTGSCKFATNCRFHHPDPTNVVSRDPLLEHENGDIPQQNVQ 294
Query: 186 PSSGLQY-------------------------AGIVPAPG------WNTY-MGNIGPLSP 213
SS L AG++P G W+ Y +GP
Sbjct: 295 ASSQLNVPLWSADQRALNEHRVPSLAPAPSYSAGMIPPRGMYPSSEWSGYHQVPLGPYYT 354
Query: 214 TSIAGSNLIYSSRNQGDL-GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCK 272
I+ + N GA Q H S PERP +P+C++++ +G CK+ CK
Sbjct: 355 PGISFHHFPAPPVNHPMYRGADVQGH-QELPSDEYPERPGEPECQHFVKSGFCKFKVKCK 413
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYG 331
+HHP+ + A PLGLP RP Q +C+ Y YG+CKFGP C ++HP+ G+P++
Sbjct: 414 YHHPRSLVPPPTARAFSPLGLPLRPDQPMCTYYERYGVCKFGPACMYNHPFNFGHPVS-- 471
Query: 332 LSLPPLS 338
+ PPLS
Sbjct: 472 AAGPPLS 478
Score = 85.9 bits (211), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 103/258 (39%), Gaps = 32/258 (12%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP-QPSSLGTALPLTGNASLGSMGSSVLPSSG 189
P R E C YY++ G+C+FG+ CKF+HP + + + + + P
Sbjct: 91 FPQRHAEPDCTYYLKFGTCRFGMKCKFNHPARKKKNKVKASGSSGSGSNDISNKAFPPDD 150
Query: 190 LQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPE 249
Q G + T + ++ Q + + E
Sbjct: 151 DQ----------------KGRMEATQLKIADETEKGIYLKKFNETEQKVAKENRKETVSE 194
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
Q +C+YY G CK+G C++ H KER + A + LGLP RPG C Y
Sbjct: 195 GTAQEECKYYSTPGGCKFGESCRYLHCEGKERKTEVAKVELNFLGLPLRPGGKECPYYMR 254
Query: 308 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIP 367
G CKF CRF HP P N +S PL ++ + Q + A+ + +P
Sbjct: 255 TGSCKFATNCRFHHP---DPTNV-VSRDPLLEHENGDIPQQNVQASSQL--------NVP 302
Query: 368 NWVQNSDAVSVQHQNPDM 385
W + A++ +H+ P +
Sbjct: 303 LWSADQRALN-EHRVPSL 319
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE----LPERNGQPDCGYYL 99
YP RPGEP+C + ++G C + C+++HP R LP R QP C YY
Sbjct: 388 YPERPGEPECQHFVKSGFCKFKVKCKYHHPRSLVPPPTARAFSPLGLPLRPDQPMCTYYE 447
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CK+G C Y+HP
Sbjct: 448 RYGVCKFGPACMYNHP 463
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
+ A R P+R+ +PDC YYLK GTC++G CK++HP +
Sbjct: 82 VETADSRPRFPQRHAEPDCTYYLKFGTCRFGMKCKFNHPARKK 124
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 216 IAGSNLIYSSRNQGDLGAGAQMHILSASSQ-NLPERPDQPDCRYYMNTGTCKYGADCKFH 274
IAGS+ G++ G + +A S+ P+R +PDC YY+ GTC++G CKF+
Sbjct: 64 IAGSD-----ETTGEITGGKVQPVETADSRPRFPQRHAEPDCTYYLKFGTCRFGMKCKFN 118
Query: 275 HPKER 279
HP +
Sbjct: 119 HPARK 123
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 21/29 (72%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPG +C +Y RTG C + +NCRF+HP
Sbjct: 241 PLRPGGKECPYYMRTGSCKFATNCRFHHP 269
>gi|226499050|ref|NP_001140642.1| hypothetical protein [Zea mays]
gi|194700310|gb|ACF84239.1| unknown [Zea mays]
gi|407232622|gb|AFT82653.1| C3H54 transcription factor, partial [Zea mays subsp. mays]
gi|413916358|gb|AFW56290.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 544
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 134/275 (48%), Gaps = 34/275 (12%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 246 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 305
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL---QY 192
CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS + Q
Sbjct: 306 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 365
Query: 193 A-----------------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 228
A G+ P+ W+ Y + P P + + + N
Sbjct: 366 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 425
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 426 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 485
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 486 SPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 520
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 423 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 482
Query: 124 VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+ +GLP++ D+ C YY R G CK+G AC F+HP
Sbjct: 483 AGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHP 519
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 95/225 (42%), Gaps = 34/225 (15%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPS 187
P R E C YY++ G+C+FG+ CKF+HP + +S + G+ S S + P
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGVGSNGSGSNSSSNKASSPD 162
Query: 188 SGL----QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYS--SRNQGDLGAGAQ----- 236
+Y G+VP + + G LS +S N+ Y +G L +
Sbjct: 163 DDQAPKEEYEGLVPDISDSMGFDDKGSLS-SSENHRNMSYEVIDMKRGKLEPKEKVCEEP 221
Query: 237 ---MHILSASSQNL--------------PERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
+H N+ E Q +C+YY G CK+G CK+ H +
Sbjct: 222 EKAIHFTKLDETNIATQKGSKDKRKETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGN 281
Query: 280 IAQSAA--SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++ + + LGLP RPG+ C Y G CKF C+F HP
Sbjct: 282 GGKTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP 326
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
YP RPG+P+C + ++G C Y CR++HP + LP + QP C YY
Sbjct: 444 YPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYG 503
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CKYG C ++HP
Sbjct: 504 RYGFCKYGPACMFNHP 519
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 189 GLQYAGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS---- 243
G+ AG P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 48 GIAVAGGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGA 96
Query: 244 ---SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 97 VDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 73 PAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 89 PAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C + +NC+F+HP
Sbjct: 298 PLRPGEKECPYYMRTGSCKFATNCKFHHP 326
>gi|226491251|ref|NP_001151211.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
gi|195645032|gb|ACG41984.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
gi|413916355|gb|AFW56287.1| zinc finger CCCH type domain-containing protein ZFN-like 6 [Zea
mays]
Length = 524
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 134/275 (48%), Gaps = 34/275 (12%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 226 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 285
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL---QY 192
CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS + Q
Sbjct: 286 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 345
Query: 193 A-----------------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 228
A G+ P+ W+ Y + P P + + + N
Sbjct: 346 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 405
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 406 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 465
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 466 SPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 500
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 403 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 462
Query: 124 VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+ +GLP++ D+ C YY R G CK+G AC F+HP
Sbjct: 463 AGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHP 499
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 14/205 (6%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPS 187
P R E C YY++ G+C+FG+ CKF+HP + +S + G+ S S + P
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGVGSNGSGSNSSSNKASSPD 162
Query: 188 SGL----QYAGIVP----APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHI 239
+Y G+VP + + G + P I+ ++ + Q
Sbjct: 163 DDQAPKEEYEGLVPDISDSMVIDMKRGKLEPKEKVCEEPEKAIHFTKLD-ETNIATQKGS 221
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSRP 297
+ E Q +C+YY G CK+G CK+ H + ++ + + LGLP RP
Sbjct: 222 KDKRKETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRP 281
Query: 298 GQAICSNYSMYGICKFGPTCRFDHP 322
G+ C Y G CKF C+F HP
Sbjct: 282 GEKECPYYMRTGSCKFATNCKFHHP 306
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
YP RPG+P+C + ++G C Y CR++HP + LP + QP C YY
Sbjct: 424 YPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYG 483
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CKYG C ++HP
Sbjct: 484 RYGFCKYGPACMFNHP 499
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 189 GLQYAGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS---- 243
G+ AG P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 48 GIAVAGGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGA 96
Query: 244 ---SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 97 VDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 73 PAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 89 PAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C + +NC+F+HP
Sbjct: 278 PLRPGEKECPYYMRTGSCKFATNCKFHHP 306
>gi|224032427|gb|ACN35289.1| unknown [Zea mays]
gi|413916356|gb|AFW56288.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 527
Score = 169 bits (427), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 96/275 (34%), Positives = 134/275 (48%), Gaps = 34/275 (12%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 229 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 288
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL---QY 192
CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS + Q
Sbjct: 289 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 348
Query: 193 A-----------------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 228
A G+ P+ W+ Y + P P + + + N
Sbjct: 349 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 408
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 409 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 468
Query: 289 GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 469 SPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 503
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 406 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 465
Query: 124 VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+ +GLP++ D+ C YY R G CK+G AC F+HP
Sbjct: 466 AGLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHP 502
Score = 79.3 bits (194), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 92/209 (44%), Gaps = 19/209 (9%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPS 187
P R E C YY++ G+C+FG+ CKF+HP + +S + G+ S S + P
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGVGSNGSGSNSSSNKASSPD 162
Query: 188 SGL----QYAGIVP----APGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHI 239
+Y G+VP + + G + P I+ ++ D A +
Sbjct: 163 DDQAPKEEYEGLVPDISDSMVIDMKRGKLEPKEKVCEEPEKAIHFTKL--DETNIATQKV 220
Query: 240 LSAS----SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGL 293
L S + E Q +C+YY G CK+G CK+ H + ++ + + LGL
Sbjct: 221 LKGSKDKRKETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGL 280
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG+ C Y G CKF C+F HP
Sbjct: 281 PLRPGEKECPYYMRTGSCKFATNCKFHHP 309
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
YP RPG+P+C + ++G C Y CR++HP + LP + QP C YY
Sbjct: 427 YPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYG 486
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CKYG C ++HP
Sbjct: 487 RYGFCKYGPACMFNHP 502
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 189 GLQYAGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS---- 243
G+ AG P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 48 GIAVAGGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGA 96
Query: 244 ---SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 97 VDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 73 PAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 89 PAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C + +NC+F+HP
Sbjct: 281 PLRPGEKECPYYMRTGSCKFATNCKFHHP 309
>gi|242083372|ref|XP_002442111.1| hypothetical protein SORBIDRAFT_08g012360 [Sorghum bicolor]
gi|241942804|gb|EES15949.1| hypothetical protein SORBIDRAFT_08g012360 [Sorghum bicolor]
Length = 537
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 135/276 (48%), Gaps = 37/276 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY +G CK+G CKY H + + V N LGLP+R EK
Sbjct: 239 KETFAEGNAQEECKYYSTSGGCKFGKACKYLHREGKEAKTEVEKAELNFLGLPLRPGEKE 298
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL----- 190
CPYYMRTGSCKF CKFHHP P++ + P + L ++ S PS +
Sbjct: 299 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENADTPLQNVQGSCQPSLQIWPDHR 358
Query: 191 ----QYA-----------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 228
Q+ G+ P+P W+ Y + P P + + + N
Sbjct: 359 TLNEQHVPFLAPAQSYGGGMVPPQGMYPSPDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 418
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA-ASN 287
A S PERP QP+C++++ +G CKY C+FHHP R QSA +
Sbjct: 419 PMYKAADVPGNQPPPSDEYPERPGQPECQHFIKSGFCKYRMKCRFHHP--RSGQSAPLTG 476
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
+ P+GLP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 477 LSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 512
Score = 84.7 bits (208), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 70 FNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
NHP Y A + E PER GQP+C +++K+G CKY C++HHP+ A
Sbjct: 416 MNHPMYKAADVPGNQPPPSDEYPERPGQPECQHFIKSGFCKYRMKCRFHHPRSGQSAPLT 475
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+ +GLP++ D+ C YY R G CK+G AC F+HP
Sbjct: 476 GLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHP 511
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 106/264 (40%), Gaps = 37/264 (14%)
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP----QPSSLGTALPLTGNASLGSMGSSV 184
L P R E C YY++ G+C+FG+ CKF+HP + S + + + + S
Sbjct: 99 LRFPRRPGEPDCSYYLKFGTCRFGIKCKFNHPARKKKSSRVRGSGSNSSSNKASSPDDDQ 158
Query: 185 LPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSI---AGSNLIYSSRNQ------------- 228
P +Y G+VP + + G LS + I +I R +
Sbjct: 159 APRE--EYEGLVPDISDSMGFDDKGSLSSSEIYRKMSYEVIDMERGKLEPKEKICEEPEK 216
Query: 229 -------GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KER 279
+ Q + E Q +C+YY +G CK+G CK+ H KE
Sbjct: 217 GIYFMKLDETNITTQKGAKDKRKETFAEGNAQEECKYYSTSGGCKFGKACKYLHREGKEA 276
Query: 280 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
+ + + LGLP RPG+ C Y G CKF C+F HP P N P L
Sbjct: 277 KTEVEKAELNFLGLPLRPGEKECPYYMRTGSCKFATNCKFHHP---DPTNASSKEPGLEH 333
Query: 340 --LDSSLMNHQAISATHSIETSPD 361
D+ L N Q S S++ PD
Sbjct: 334 ENADTPLQNVQG-SCQPSLQIWPD 356
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 10 NAVANQSADNIEEAIWRLKIHDNQEGGGVAQAS-----PYPARPGEPDCLFYRRTGLCGY 64
NAV AD IE+ + L I GGG + S P P R L G
Sbjct: 30 NAV---DADAIEKQLAGLGIAVAGNGGGFPEPSGWDDGPVPVR--------IPAAVLVGR 78
Query: 65 GSNCRFNHPAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 79 DEGADEKPPAPAPTGAVDVKLRFPRRPGEPDCSYYLKFGTCRFGIKCKFNHPARKK 134
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 93 GAVDVKLRFPRRPGEPDCSYYLKFGTCRFGIKCKFNHPARKKKSSRVR 140
>gi|326521656|dbj|BAK00404.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1431
Score = 165 bits (417), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 105/294 (35%), Positives = 141/294 (47%), Gaps = 51/294 (17%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP RPG +C F+ R G C + S C+++HP + Q PER G+PDC +Y++ G
Sbjct: 1099 YPERPGRQECPFFARYGDCKFASACKYHHPKQSKDKEQVN--YPERPGRPDCPFYMRFGD 1156
Query: 104 CKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
CK+ S C YHHPKD+ GLP +E CP+YM+ G CKFG CKF+HP+ +
Sbjct: 1157 CKFASACNYHHPKDKYPT--------GLP---EEPECPFYMKRGFCKFGAQCKFYHPEDA 1205
Query: 164 SLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPT--SIAGSNL 221
+ P +A + PS+ + VP P P S+ +
Sbjct: 1206 NPTMQSPT--DAKISVTMDEHHPSTRITPEDHVPQ----------QPQYPERRSVTTDDH 1253
Query: 222 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 281
S+R + +L Q PERP QPDCRYYM G CKY + C FHHPK+R+A
Sbjct: 1254 HPSTRITPE--------VLPQQPQ-YPERPGQPDCRYYMQFGKCKYLSACIFHHPKDRLA 1304
Query: 282 Q-------SAASNIGPL--GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
+ + IGP G+P C Y G C+FG C F HP Y
Sbjct: 1305 AMWSPSDPAHSDQIGPKIHGMPD------CPFYMKSGKCQFGSLCEFRHPKDIY 1352
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 113/295 (38%), Gaps = 109/295 (36%)
Query: 48 PGEPDCLFYRRTGLCGYGSNCRFNHPA-------------------------------YA 76
P EP+C FY + G C +G+ C+F HP +
Sbjct: 1177 PEEPECPFYMKRGFCKFGAQCKFYHPEDANPTMQSPTDAKISVTMDEHHPSTRITPEDHV 1236
Query: 77 AQGAQYRE------------------------ELPERNGQPDCGYYLKTGTCKYGSTCKY 112
Q QY E + PER GQPDC YY++ G CKY S C +
Sbjct: 1237 PQQPQYPERRSVTTDDHHPSTRITPEVLPQQPQYPERPGQPDCRYYMQFGKCKYLSACIF 1296
Query: 113 HHPKDRNGA-----GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 167
HHPKDR A P + +G P CP+YM++G C+FG C+F HP+
Sbjct: 1297 HHPKDRLAAMWSPSDPAHSDQIG-PKIHGMPDCPFYMKSGKCQFGSLCEFRHPKDI---- 1351
Query: 168 ALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
Y+ A G T G Y S
Sbjct: 1352 ------------------------YSTTEEAFGERTGSG---------------AYDSLT 1372
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 282
+ D G Q S PERP +P+C +YM G CK+ +CK+HHP +R+++
Sbjct: 1373 RSDNGVEQQ-----EGSVMYPERPGEPECAHYMRQGYCKFQMNCKYHHPGDRLSK 1422
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 54/153 (35%), Positives = 80/153 (52%), Gaps = 34/153 (22%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA------YAAQGAQYREEL-PERNGQ 92
Q YP RPG+PDC +Y + G C Y S C F+HP ++ + +++ P+ +G
Sbjct: 1266 QQPQYPERPGQPDCRYYMQFGKCKYLSACIFHHPKDRLAAMWSPSDPAHSDQIGPKIHGM 1325
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKD-----------RNGAGPVSFNILG----------- 130
PDC +Y+K+G C++GS C++ HPKD R G+G +++ L
Sbjct: 1326 PDCPFYMKSGKCQFGSLCEFRHPKDIYSTTEEAFGERTGSG--AYDSLTRSDNGVEQQEG 1383
Query: 131 ---LPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P R E C +YMR G CKF + CK+HHP
Sbjct: 1384 SVMYPERPGEPECAHYMRQGYCKFQMNCKYHHP 1416
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 43/82 (52%), Gaps = 12/82 (14%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
N PERP +PDC +YM G CK+ + C +HHPK++ P GLP P C Y
Sbjct: 1138 NYPERPGRPDCPFYMRFGDCKFASACNYHHPKDKY---------PTGLPEEPE---CPFY 1185
Query: 306 SMYGICKFGPTCRFDHPYAGYP 327
G CKFG C+F HP P
Sbjct: 1186 MKRGFCKFGAQCKFYHPEDANP 1207
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 20/107 (18%)
Query: 70 FNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP-------------- 115
N Y A +Y P++ + +C Y+ GTC YG +C ++HP
Sbjct: 830 VNKEKYRAPARRY----PQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPS 885
Query: 116 --KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+D A + N LGLP+R+ ++C YYMRTG+C++G C F+HP
Sbjct: 886 ERRDHGAAEILELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP 932
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 50/105 (47%), Gaps = 26/105 (24%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAA-----QGAQ 81
P G PDC FY ++G C +GS C F HP AY + G +
Sbjct: 1320 PKIHGMPDCPFYMKSGKCQFGSLCEFRHPKDIYSTTEEAFGERTGSGAYDSLTRSDNGVE 1379
Query: 82 YRE---ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
+E PER G+P+C +Y++ G CK+ CKYHHP DR P
Sbjct: 1380 QQEGSVMYPERPGEPECAHYMRQGYCKFQMNCKYHHPGDRLSKKP 1424
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ PERP + +C ++ G CK+ + CK+HHPK+ + + + P RPG+ C Y
Sbjct: 1098 DYPERPGRQECPFFARYGDCKFASACKYHHPKQ------SKDKEQVNYPERPGRPDCPFY 1151
Query: 306 SMYGICKFGPTCRFDHPYAGYP 327
+G CKF C + HP YP
Sbjct: 1152 MRFGDCKFASACNYHHPKDKYP 1173
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 83/179 (46%), Gaps = 24/179 (13%)
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-------------PKERIAQSAAS-- 286
A ++ P++P + +C YM+ GTC YG C F+H P ER AA
Sbjct: 837 APARRYPQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPSERRDHGAAEIL 896
Query: 287 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM- 345
+ LGLP R G C Y G C++G C F+HP + I+ S P D++L
Sbjct: 897 ELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP--DHVIDARFS-SPTGWEDNALET 953
Query: 346 ----NHQAISATHSIETSPDAS-SKIPNWVQNSDAVSVQHQNPDMKNSTTKNSDDSSKV 399
+H A+H + S DA+ + + ++SD V++ ++ K+S DD S +
Sbjct: 954 EKSSDHALTEASHMKKASDDATLNDRSHLKKSSDGVTLDDRSHLNKSSDNATLDDRSHL 1012
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 46/96 (47%), Gaps = 19/96 (19%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY------------------AAQGA 80
A A YP +P + +C Y G C YG +C FNHP AA+
Sbjct: 837 APARRYPQKPRKLNCPSYMSKGTCTYGPSCHFNHPPQFNAKTNDSWRPSERRDHGAAEIL 896
Query: 81 QY-REELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
+ R LP R G +C YY++TG C+YG C ++HP
Sbjct: 897 ELNRLGLPIREGARNCDYYMRTGACRYGKNCHFNHP 932
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 22/91 (24%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPK-----------ERIAQSAASNI-----------GPL 291
PDC +YM +G C++G+ C+F HPK ER A ++ G +
Sbjct: 1326 PDCPFYMKSGKCQFGSLCEFRHPKDIYSTTEEAFGERTGSGAYDSLTRSDNGVEQQEGSV 1385
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG+ C++Y G CKF C++ HP
Sbjct: 1386 MYPERPGEPECAHYMRQGYCKFQMNCKYHHP 1416
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 66/203 (32%), Gaps = 67/203 (33%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
PE + D Y T + KY P R P N CP YM
Sbjct: 810 PENDLAMDTAAYQGTRDWGIVNKEKYRAPARRYPQKPRKLN------------CPSYMSK 857
Query: 147 GSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMG 206
G+C +G +C F+HP P +N
Sbjct: 858 GTCTYGPSCHFNHP--------------------------------------PQFN---- 875
Query: 207 NIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCK 266
A +N + + D GA IL + LP R +C YYM TG C+
Sbjct: 876 ----------AKTNDSWRPSERRDHGAA---EILELNRLGLPIREGARNCDYYMRTGACR 922
Query: 267 YGADCKFHHPKERIAQSAASNIG 289
YG +C F+HP I +S G
Sbjct: 923 YGKNCHFNHPDHVIDARFSSPTG 945
>gi|255635495|gb|ACU18099.1| unknown [Glycine max]
Length = 235
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/238 (42%), Positives = 133/238 (55%), Gaps = 51/238 (21%)
Query: 24 IWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGA 80
+W L + GGV YP RPG P+C++Y RTG+CGYG CRFNHP A A
Sbjct: 1 MWHLTL------GGVES---YPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAVAAAV 51
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDE 137
+ + PER G+P C YYLKTGTCK+G++CK+HHPK NG G +S NI G P+R E
Sbjct: 52 RATGDYPERVGEPPCQYYLKTGTCKFGASCKFHHPK--NGGGYLSQAPLNIYGYPLRLGE 109
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT---------------------GNAS 176
K C YY++TG CKFG++CKFHHPQP+ GT+LP + + S
Sbjct: 110 KECSYYLKTGQCKFGISCKFHHPQPA--GTSLPTSAPQFYQQVQSPTVPLPEQYGGASTS 167
Query: 177 LGSMGSSVLPSSGLQYA--------GIVPAPGWNTYMGNIGP-LSPTS--IAGSNLIY 223
L VLP S +Q A G+V PGW+ Y + P LSP + + G+ +Y
Sbjct: 168 LRVARPPVLPGSYVQGAYGPVLLSPGVVQFPGWSHYSAPVSPVLSPGTQPVVGATSLY 225
Score = 81.3 bits (199), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ PER +P C+YY+ TGTCK+GA CKFHHPK + + + G P R G+ CS Y
Sbjct: 56 DYPERVGEPPCQYYLKTGTCKFGASCKFHHPKNGGGYLSQAPLNIYGYPLRLGEKECSYY 115
Query: 306 SMYGICKFGPTCRFDHP 322
G CKFG +C+F HP
Sbjct: 116 LKTGQCKFGISCKFHHP 132
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 297
H+ ++ PERP P+C YYM TG C YG C+F+HP++R A +AA P R
Sbjct: 3 HLTLGGVESYPERPGVPNCVYYMRTGVCGYGDRCRFNHPRDRAAVAAAVRAT-GDYPERV 61
Query: 298 GQAICSNYSMYGICKFGPTCRFDHPYAG 325
G+ C Y G CKFG +C+F HP G
Sbjct: 62 GEPPCQYYLKTGTCKFGASCKFHHPKNG 89
>gi|413950620|gb|AFW83269.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 308
Score = 157 bits (398), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 103/313 (32%), Positives = 135/313 (43%), Gaps = 84/313 (26%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV------------------SFNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + + + N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGI 195
E C +YM+TGSCK+G C+F+HP P A + + + LPSS
Sbjct: 136 GEVDCSFYMKTGSCKYGSICRFNHPDRPG-----PAADIAFMVPLVQATLPSS------- 183
Query: 196 VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD 255
P+ P + +IY P+RP +
Sbjct: 184 -------------APIVPAVVEPLPMIY------------------------PQRPGETV 206
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP------LGLPSRPGQAICSNYSMYG 309
C +YM TG+CKY CKFHHP R A + N P LP R C+ Y G
Sbjct: 207 CDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSG 266
Query: 310 ICKFGPTCRFDHP 322
+C+FG C+FDHP
Sbjct: 267 MCRFGAHCKFDHP 279
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/166 (34%), Positives = 81/166 (48%), Gaps = 43/166 (25%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI-------- 128
A + LP R G+ DC +Y+KTG+CKYGS C+++HP A ++F +
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLP 181
Query: 129 --------------LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+ P R E C +YM+TGSCK+ CKFHHP
Sbjct: 182 SSAPIVPAVVEPLPMIYPQRPGETVCDFYMKTGSCKYSQKCKFHHP 227
Score = 89.4 bits (220), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 96/219 (43%), Gaps = 29/219 (13%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSG 189
P R E CPY + CKF CKF+HP+ ++LGT T N SL + S+VLP
Sbjct: 18 PERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTG---TNNESLIA-DSAVLPVRP 72
Query: 190 LQYAGIVPAPGWNTYMGNIGPLS-PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLP 248
+ + A G I + P I S LI A + +++ LP
Sbjct: 73 SEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLP 132
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKER-----------IAQS----------AASN 287
R + DC +YM TG+CKYG+ C+F+HP + Q+ A
Sbjct: 133 IRQGEVDCSFYMKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVE 192
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY 326
P+ P RPG+ +C Y G CK+ C+F HP + +
Sbjct: 193 PLPMIYPQRPGETVCDFYMKTGSCKYSQKCKFHHPISRF 231
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 IWRLKIHDNQEGG--GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
I R H + G A + P R C FY R+G+C +G++C+F+HP
Sbjct: 228 ISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 279
>gi|11994409|dbj|BAB02411.1| zinc finger protein-like [Arabidopsis thaliana]
Length = 326
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/346 (32%), Positives = 155/346 (44%), Gaps = 67/346 (19%)
Query: 58 RTGLCGYGSNCRFNHPAYAAQG---------AQYREELPERNGQPDCGYYLKTGTCKYGS 108
+T C +G +CRF+HP + +G EE PER G+PDC YY+KT CKYGS
Sbjct: 2 QTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPNEEYPERPGEPDCPYYIKTQRCKYGS 61
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ----PSS 164
CK++HP++ + + LP R E C +YM+TG CKFG++CKFHHP+ PSS
Sbjct: 62 KCKFNHPREEAAVSVETQD--SLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSS 119
Query: 165 ---LGTALPLTGNASLGS-----------MGSSVLPSSGLQYAGIVPAP-----GWNTYM 205
+G+++ LT + S LP L + G V P G Y
Sbjct: 120 SQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSL-FQGEVDCPFYLKTGSCKYG 178
Query: 206 GNIGPLSPTSI------AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYY 259
P AG N S N +L G L + + + QP YY
Sbjct: 179 ATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLG-----LVTPATSFYQTLTQPT--YY 231
Query: 260 MNTGTCKYGADCKFHHPKERIA-------QSAASNIGPLGLPSRPGQAICSNYSMYGICK 312
M TG CK+G CKFHHP +R++ Q + G P R G C Y G CK
Sbjct: 232 MKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCK 291
Query: 313 FGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIET 358
+G TC+FDHP PP ++ + A AT++ T
Sbjct: 292 YGATCKFDHP------------PPGEVMAKTTSEADAAGATNTDTT 325
Score = 152 bits (383), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 96/285 (33%), Positives = 138/285 (48%), Gaps = 74/285 (25%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREELPERNGQPDCGYYLKTG 102
YP RPGEPDC +Y +T C YGS C+FNHP AA + ++ LPER +P C +Y+KTG
Sbjct: 39 YPERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTG 98
Query: 103 TCKYGSTCKYHHPKDRNGAGP---------------------VSF------NILGLPMR- 134
CK+G +CK+HHPKD V+F N GLP+R
Sbjct: 99 KCKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRS 158
Query: 135 --QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQY 192
Q E CP+Y++TGSCK+G C+++HP+ ++ + ++G+ Y
Sbjct: 159 LFQGEVDCPFYLKTGSCKYGATCRYNHPERTAF------------------IPQAAGVNY 200
Query: 193 AGIVPAPGWNTYMGNIGPLSPTSIAGSNLI----YSSRNQGDLGAGAQMH----ILSASS 244
+ + NT N+G ++P + L Y + G + H LSA +
Sbjct: 201 SLV----SSNTANLNLGLVTPATSFYQTLTQPTYYMKTGECKFGERCKFHHPADRLSAMT 256
Query: 245 QNLPERPDQP-------------DCRYYMNTGTCKYGADCKFHHP 276
+ P++P+ +C YYM TGTCKYGA CKF HP
Sbjct: 257 KQAPQQPNVKLSLAGYPRREGALNCPYYMKTGTCKYGATCKFDHP 301
Score = 105 bits (263), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/147 (40%), Positives = 74/147 (50%), Gaps = 32/147 (21%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHP---AYAAQGAQYREELPERNG-------------- 91
GE DC FY +TG C YG+ CR+NHP A+ Q A L N
Sbjct: 162 GEVDCPFYLKTGSCKYGATCRYNHPERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSF 221
Query: 92 -----QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP--------VSFNILGLPMRQDEK 138
QP YY+KTG CK+G CK+HHP DR A V ++ G P R+
Sbjct: 222 YQTLTQPT--YYMKTGECKFGERCKFHHPADRLSAMTKQAPQQPNVKLSLAGYPRREGAL 279
Query: 139 SCPYYMRTGSCKFGVACKFHHPQPSSL 165
+CPYYM+TG+CK+G CKF HP P +
Sbjct: 280 NCPYYMKTGTCKYGATCKFDHPPPGEV 306
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 112/253 (44%), Gaps = 34/253 (13%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAG-------PVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
++T TCK+G +C++ HP G PV N P R E CPYY++T CK+
Sbjct: 1 MQTRTCKFGESCRFDHPIWVPEGGIPDWKEAPVVPN-EEYPERPGEPDCPYYIKTQRCKY 59
Query: 152 GVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYM-GNIGP 210
G CKF+HP+ + A+ + SL S + + ++ + +I
Sbjct: 60 GSKCKFNHPREEA---AVSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQL 116
Query: 211 LSPTSIAGSNLIYSSRNQGDLGAGAQMH-ILSASSQNLPERP---DQPDCRYYMNTGTCK 266
S + GS++ +S L +S+ LP R + DC +Y+ TG+CK
Sbjct: 117 PSSSQDIGSSVGLTSEPDATNNPHVTFTPALYHNSKGLPVRSLFQGEVDCPFYLKTGSCK 176
Query: 267 YGADCKFHHPKERIA---------------QSAASNIGPLGLPSRPGQAIC--SNYSMYG 309
YGA C+++HP ER A +A N+G + + Q + + Y G
Sbjct: 177 YGATCRYNHP-ERTAFIPQAAGVNYSLVSSNTANLNLGLVTPATSFYQTLTQPTYYMKTG 235
Query: 310 ICKFGPTCRFDHP 322
CKFG C+F HP
Sbjct: 236 ECKFGERCKFHHP 248
>gi|293335701|ref|NP_001169053.1| uncharacterized protein LOC100382893 [Zea mays]
gi|223974689|gb|ACN31532.1| unknown [Zea mays]
Length = 462
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 109/355 (30%), Positives = 152/355 (42%), Gaps = 80/355 (22%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA--QYREEL------PERNGQPDC 95
YP RPG+ DC FY TG C YG C+F+HP + +G ++E L PER G+PDC
Sbjct: 106 YPQRPGQKDCAFYMSTGTCKYGETCKFDHPQWVPEGGVPNWKEVLNDEDYYPERPGEPDC 165
Query: 96 GYYLKTGTCKYGSTCKYHHPKD-------RNGAGPVSFNILGLPMRQDEKSCPYYMRTGS 148
Y L + CK+ S CK++HPK+ R + + LP+R E C +Y +TG
Sbjct: 166 PYLL-SSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGK 224
Query: 149 CKFGVACKFHHPQPSSLGTALPLTGN----------ASLGSMGSSVLPSSGLQYAGIVPA 198
CKFG CKF+HP+ + T + A +G SV +A I PA
Sbjct: 225 CKFGAVCKFNHPKLEDIKTPSLIAKETIYRATTDAAAHIGGTDDSV---PAKTHAPIAPA 281
Query: 199 PGWNT--------------YM-------GNIGPLSPTSIAGSNLIYSSRNQGDLGAGA-- 235
N YM G+I + + ++ + + Q L A
Sbjct: 282 EAHNAKGLPIRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMAPVQATLPFPAPI 341
Query: 236 ----------------QMHILSASSQNLP----ERPDQPDCRYYMNTGTCKYGADCKFHH 275
H + +P +RP + C +YM TG+CKY +CKFHH
Sbjct: 342 VPAVALNPAANFLQSFDFHATHVPVEPMPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHH 401
Query: 276 PKERIAQSAASN--------IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P +R A + N + GLP R C+ Y G C FG C+FDHP
Sbjct: 402 PFDRSAPHSKENEDTQQPVALTLAGLPRREDAEACAFYMRSGTCGFGARCKFDHP 456
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
+++ S +YSS A+ L +S P+RP Q DC +YM+TGTCKYG CKF
Sbjct: 79 STVGQSETLYSSITM------AKRPRLESSLPIYPQRPGQKDCAFYMSTGTCKYGETCKF 132
Query: 274 HHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
HP + + + N + P RPG+ C Y + CKF C+F+HP
Sbjct: 133 DHP-QWVPEGGVPNWKEVLNDEDYYPERPGEPDCP-YLLSSRCKFKSKCKFNHP 184
>gi|147842162|emb|CAN71488.1| hypothetical protein VITISV_005339 [Vitis vinifera]
Length = 232
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 82/185 (44%), Positives = 109/185 (58%), Gaps = 38/185 (20%)
Query: 110 CKYHHPKDRNGAGPVSFNILGLP----MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
CK+ + + A ++ + LP + ++EK C YYMRTG CKFG CKFHH QP+S+
Sbjct: 48 CKWGLSRKQVDADGLTRMQIRLPTTVEVNKEEKPCSYYMRTGLCKFGATCKFHHLQPASI 107
Query: 166 GTALPLTGNASLGSMGSSVLPSSGLQYAG------------------------------- 194
GT LP+T A+ GS G S+ PSSGL Y G
Sbjct: 108 GTVLPITSPAAFGSTGVSITPSSGLPYVGGIPAWSLPRAPCMPGPHMQGPQTYMPIIFSS 167
Query: 195 ---IVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 251
IVPA GWNTYMGN+ P+S TSI GSNL+Y+++NQG+ G+G Q+H+LS+S LP+R
Sbjct: 168 SQGIVPAQGWNTYMGNMSPISSTSILGSNLVYNTKNQGESGSGGQVHLLSSSIPYLPKRR 227
Query: 252 DQPDC 256
DQP+C
Sbjct: 228 DQPEC 232
Score = 45.8 bits (107), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 28/53 (52%), Gaps = 6/53 (11%)
Query: 225 SRNQGDLGAGAQMHIL--SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 275
SR Q D +M I + N E+P C YYM TG CK+GA CKFHH
Sbjct: 53 SRKQVDADGLTRMQIRLPTTVEVNKEEKP----CSYYMRTGLCKFGATCKFHH 101
>gi|297790312|ref|XP_002863055.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308861|gb|EFH39314.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 253
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/255 (36%), Positives = 135/255 (52%), Gaps = 51/255 (20%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
+YLKTGTCK+G++CK+HHPK+ G+ V NI G P+R+ + C YY++TG CKFG+ C
Sbjct: 1 FYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITC 60
Query: 156 KFHHPQPS-----------------SLGTALP--LTGNASLGSMGSSVLPSSGLQYA--- 193
KFHHPQP+ S+ + +P G +S + ++LP S +Q A
Sbjct: 61 KFHHPQPAGTTVPPPPPASAPQFYPSVQSLMPDQYGGPSSSLRVARTLLPGSYMQGAYGP 120
Query: 194 -----GIVPAPGWNTYMGNI------GPLSP------------TSIAGSNLIYSSRNQ-- 228
G+VP PGW+ Y P+SP TS+ G + S+
Sbjct: 121 MLLTPGVVPIPGWSPYSSLSDSLLLQAPVSPALSPGAQHAVGATSLYGVTQLSSTTPSLP 180
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
G + + + Q PERP +P+C+YY+ TG CK+G CKFHHP++R+ A +
Sbjct: 181 GVYPSLSSPTGVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCIL 240
Query: 289 GPLGLPSRPGQAICS 303
P+GLP RP +CS
Sbjct: 241 SPIGLPLRP---VCS 252
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 37/65 (56%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTC 317
+Y+ TGTCK+GA CKFHHPK + G P R G CS Y G CKFG TC
Sbjct: 1 FYLKTGTCKFGASCKFHHPKNAGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITC 60
Query: 318 RFDHP 322
+F HP
Sbjct: 61 KFHHP 65
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/57 (52%), Positives = 40/57 (70%), Gaps = 5/57 (8%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNIL---GLPMR 134
Q + PER G+P+C YYLKTG CK+G++CK+HHP+DR P + IL GLP+R
Sbjct: 194 QKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHPRDR--VPPRANCILSPIGLPLR 248
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%), Gaps = 9/54 (16%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPER 89
G + + +P RPGEP+C +Y +TG C +G++C+F+HP R+ +P R
Sbjct: 191 GVIQKEQAFPERPGEPECQYYLKTGDCKFGTSCKFHHP---------RDRVPPR 235
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 28 KIHDNQEGGGVAQASP-----YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
K H + GG P YP R G+ +C +Y +TG C +G C+F+HP
Sbjct: 15 KFHHPKNAGGSMTHVPLNIYGYPVREGDNECSYYLKTGQCKFGITCKFHHP 65
>gi|414876870|tpg|DAA54001.1| TPA: hypothetical protein ZEAMMB73_676626 [Zea mays]
Length = 269
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 89/194 (45%), Positives = 108/194 (55%), Gaps = 29/194 (14%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP---------AYAAQGAQYREELPERNGQPDC 95
P RPGE DC +Y RTG CG+G CR+NHP A GA + PER GQP C
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAA--QYFPERQGQPVC 116
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YYLKTGTCK+GS CKYHHPK V N G P+R EK C YYM+TG CKFG C
Sbjct: 117 EYYLKTGTCKFGSNCKYHHPKQDGSVQSVILNNNGFPLRPGEKECSYYMKTGQCKFGSTC 176
Query: 156 KFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPT- 214
KFHHP+ +P+T ++ + + S ++ S+G AP WN + + PLS T
Sbjct: 177 KFHHPEFG----GIPVTRSSWI--IYSRLIHSNG--------APIWNGSIARMEPLSGTG 222
Query: 215 ---SIAGSNLIYSS 225
SI S YSS
Sbjct: 223 KSCSIRWSTTNYSS 236
Score = 91.3 bits (225), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 48/106 (45%), Positives = 63/106 (59%), Gaps = 8/106 (7%)
Query: 226 RNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSA 284
R + G GA+ + ++Q PER QP C YY+ TGTCK+G++CK+HHPK+ QS
Sbjct: 90 RGGTEFGGGAK----NGAAQYFPERQGQPVCEYYLKTGTCKFGSNCKYHHPKQDGSVQSV 145
Query: 285 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPIN 329
N G P RPG+ CS Y G CKFG TC+F HP + G P+
Sbjct: 146 ILNNN--GFPLRPGEKECSYYMKTGQCKFGSTCKFHHPEFGGIPVT 189
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICS 303
LPERP + DC YY+ TG C +G C+++HP++R A N P R GQ +C
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRGGTEFGGGAKNGAAQYFPERQGQPVCE 117
Query: 304 NYSMYGICKFGPTCRFDHP 322
Y G CKFG C++ HP
Sbjct: 118 YYLKTGTCKFGSNCKYHHP 136
>gi|357135532|ref|XP_003569363.1| PREDICTED: zinc finger CCCH domain-containing protein 8-like
[Brachypodium distachyon]
Length = 479
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 103/358 (28%), Positives = 157/358 (43%), Gaps = 88/358 (24%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA--------QYREELPERNGQPDC 95
YP RPGE DC FY RT C YG C+F+HP + +G + E PER G+PDC
Sbjct: 98 YPQRPGEKDCAFYMRTRTCMYGEGCKFDHPQWVPEGGIPNWKEAPKDEESYPERPGEPDC 157
Query: 96 GYYLKTGTCKYGSTCKYHHPKDR---------NGAGPVSFNILGLPMRQDEKSCPYYMRT 146
+++KT C + S CK++HPK++ N +S + + P++ E CP++ +
Sbjct: 158 PFFMKTRRCGFASKCKFNHPKEKVNVTVAGTGNKGSQISESSIS-PVKPSE-PCPFFPK- 214
Query: 147 GSCKFGVACKFHHPQPSSLGTALPLTGN-----ASLGSMGSSVLPSSGLQYAGIVPAPGW 201
G CKFG CKF H + +P +G+ A++ + G ++ S + + P
Sbjct: 215 GKCKFGTNCKFSHAK----DIEVPSSGHESKSTATVEAAGHNIAASDSVSAKKLTPVAQE 270
Query: 202 NTYMGNIGPLSPTSIAGSNLIYS--------------SRNQGDL---------------G 232
+ G P+ P + S I + R+ L
Sbjct: 271 HNSKGM--PIRPGEVDCSFYIKTGSCMYGSTCRFNHPERHHPVLDFPLVAPLGQSILPTS 328
Query: 233 AGAQMHILSASSQNLP-------------------ERPDQPDCRYYMNTGTCKYGADCKF 273
+ + +L+ ++ LP +RP + C +YM TG CK+ CKF
Sbjct: 329 SVVPVEMLNRATNFLPNFDFHATHVPIEPEPIAYPQRPGETVCDFYMKTGFCKFSEKCKF 388
Query: 274 HHPKERIAQSAASNIGP---------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
HHP +R A + ++ P GLP R +CS Y G CKFG C+FDHP
Sbjct: 389 HHPVDRSASAPVASTEPRQKSVTLTLAGLPRREDAEVCSFYMKTGTCKFGVQCKFDHP 446
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/185 (35%), Positives = 83/185 (44%), Gaps = 54/185 (29%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPA------------------------------ 74
P RPGE DC FY +TG C YGS CRFNHP
Sbjct: 277 PIRPGEVDCSFYIKTGSCMYGSTCRFNHPERHHPVLDFPLVAPLGQSILPTSSVVPVEML 336
Query: 75 -----------YAAQGAQYREE---LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ A E P+R G+ C +Y+KTG CK+ CK+HHP DR+
Sbjct: 337 NRATNFLPNFDFHATHVPIEPEPIAYPQRPGETVCDFYMKTGFCKFSEKCKFHHPVDRSA 396
Query: 121 AGPV----------SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP 170
+ PV + + GLP R+D + C +YM+TG+CKFGV CKF HP P +
Sbjct: 397 SAPVASTEPRQKSVTLTLAGLPRREDAEVCSFYMKTGTCKFGVQCKFDHPPPEEAIAKVS 456
Query: 171 LTGNA 175
G A
Sbjct: 457 KQGAA 461
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 116/279 (41%), Gaps = 52/279 (18%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ 191
P R EK C +YMRT +C +G CKF HPQ G +P A P
Sbjct: 99 PQRPGEKDCAFYMRTRTCMYGEGCKFDHPQWVPEG-GIPNWKEA----------PKDEES 147
Query: 192 YAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERP 251
Y P +M S N N G G + +S SS + P +P
Sbjct: 148 YPERPGEPDCPFFM-KTRRCGFASKCKFNHPKEKVNVTVAGTGNKGSQISESSIS-PVKP 205
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKE---------------------RIAQS---AASN 287
+P C ++ G CK+G +CKF H K+ IA S +A
Sbjct: 206 SEP-CPFFPK-GKCKFGTNCKFSHAKDIEVPSSGHESKSTATVEAAGHNIAASDSVSAKK 263
Query: 288 IGPL-------GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
+ P+ G+P RPG+ CS Y G C +G TCRF+HP +P+ L P ++ L
Sbjct: 264 LTPVAQEHNSKGMPIRPGEVDCSFYIKTGSCMYGSTCRFNHPERHHPV---LDFPLVAPL 320
Query: 341 DSSLMNHQAISATHSIETSPDASSKIPNWVQNSDAVSVQ 379
S++ S+ +E A++ +PN+ ++ V ++
Sbjct: 321 GQSIL---PTSSVVPVEMLNRATNFLPNFDFHATHVPIE 356
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 48/95 (50%), Gaps = 13/95 (13%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA-----QYREE--------LPERN 90
YP RPGE C FY +TG C + C+F+HP + A + R++ LP R
Sbjct: 362 YPQRPGETVCDFYMKTGFCKFSEKCKFHHPVDRSASAPVASTEPRQKSVTLTLAGLPRRE 421
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS 125
C +Y+KTGTCK+G CK+ HP VS
Sbjct: 422 DAEVCSFYMKTGTCKFGVQCKFDHPPPEEAIAKVS 456
Score = 58.2 bits (139), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 10/113 (8%)
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKF 273
+++ S +YSS + A+ + +S P+RP + DC +YM T TC YG CKF
Sbjct: 71 STMGQSEALYSSNSM------AKRPRVESSLPIYPQRPGEKDCAFYMRTRTCMYGEGCKF 124
Query: 274 HHPKER----IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
HP+ I + P RPG+ C + C F C+F+HP
Sbjct: 125 DHPQWVPEGGIPNWKEAPKDEESYPERPGEPDCPFFMKTRRCGFASKCKFNHP 177
>gi|388519213|gb|AFK47668.1| unknown [Medicago truncatula]
Length = 455
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/178 (41%), Positives = 100/178 (56%), Gaps = 18/178 (10%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-------AAQGAQYREELPERNGQPDCG 96
+P RP DC FY +TG C +G NC+FNHP + + REE E GQ +C
Sbjct: 231 FPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENAGQTECK 290
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
YY ++G CK+G CKY+H R P+S N LGLP+R E+ CPYYMRTGSCKFG C
Sbjct: 291 YYQRSGGCKFGKACKYNHS--RGFTAPISELNFLGLPIRLGERECPYYMRTGSCKFGSNC 348
Query: 156 KFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSP 213
+F+HP P+++G + P +G + GS+ L+ P W++ N P +P
Sbjct: 349 RFNHPDPTTVGGSDPQSGYGNGGSV--------SLRGVSQQPVASWSSRKLNETPFAP 398
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSR-P 297
S + P RP+ DC +YM TG+CK+G +CKF+HP R Q+ A + P
Sbjct: 225 SDGTHQFPLRPEAEDCSFYMKTGSCKFGFNCKFNHPIRRKNQNQAVREKVREREEPEENA 284
Query: 298 GQAICSNYSMYGICKFGPTCRFDHP-----------YAGYPINYG 331
GQ C Y G CKFG C+++H + G PI G
Sbjct: 285 GQTECKYYQRSGGCKFGKACKYNHSRGFTAPISELNFLGLPIRLG 329
>gi|413947008|gb|AFW79657.1| hypothetical protein ZEAMMB73_788382 [Zea mays]
Length = 239
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 114/220 (51%), Gaps = 33/220 (15%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
Query: 74 A-----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
G E PER GQP C YY K GTCK+GS CK+ HP++ +G PV+ N
Sbjct: 68 RDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRE-SGFVPVALNN 126
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP---------------QPSSLGTALPLTG 173
G P+R EK C YYM+TG CKFG CKFHHP QPS + + P
Sbjct: 127 SGFPLRLGEKECSYYMKTGHCKFGGTCKFHHPELGFLTETPGMYPPVQPSPISSPHPYPH 186
Query: 174 NASLGSMGSSVLPSSGL--------QYAGIVPAPGWNTYM 205
+++ +V+P S L ++P GWN Y+
Sbjct: 187 HSNWQMGRPAVVPGSFLPGPYPPMMLPPTVMPMQGWNPYV 226
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 61/109 (55%), Gaps = 7/109 (6%)
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCTYYLRTGACGYGERCRYN 65
Query: 275 HPKERIA-QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
HP++R A + + P RPGQ +C Y+ G CKFG C+FDHP
Sbjct: 66 HPRDRPAPVNGVGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHP 114
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 239 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
+ + PERP QP C YY GTCK+G++CKF HP+E A N G P R G
Sbjct: 77 VGKTTGMEYPERPGQPLCEYYAKNGTCKFGSNCKFDHPRESGFVPVALNNS--GFPLRLG 134
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAGY 326
+ CS Y G CKFG TC+F HP G+
Sbjct: 135 EKECSYYMKTGHCKFGGTCKFHHPELGF 162
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 66/147 (44%), Gaps = 25/147 (17%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 190
LP R E C YY+RTG+C +G C+++HP+ P+ G V ++G+
Sbjct: 38 LPERPGEADCTYYLRTGACGYGERCRYNHPR----DRPAPVNG----------VGKTTGM 83
Query: 191 QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 250
+Y P Y N T GSN + + ++ ++ P R
Sbjct: 84 EYPERPGQPLCEYYAKNG-----TCKFGSNCKFDHPRESGFVP------VALNNSGFPLR 132
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPK 277
+ +C YYM TG CK+G CKFHHP+
Sbjct: 133 LGEKECSYYMKTGHCKFGGTCKFHHPE 159
>gi|302143643|emb|CBI22396.3| unnamed protein product [Vitis vinifera]
Length = 134
Score = 144 bits (363), Expect = 8e-32, Method: Composition-based stats.
Identities = 64/84 (76%), Positives = 69/84 (82%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYM 144
E ER GQPDCGYYLKT TCKYGS CKYHH +DR AGPVS NI+GL MRQ+EK C YYM
Sbjct: 19 EFLERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVSLNIVGLSMRQEEKPCSYYM 78
Query: 145 RTGSCKFGVACKFHHPQPSSLGTA 168
RTG CKFGVACKFHH QP+S+GT
Sbjct: 79 RTGLCKFGVACKFHHLQPASIGTG 102
Score = 75.5 bits (184), Expect = 5e-11, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
ER QPDC YY+ T TCKYG+ CK+HH ++R+ S + +GL R + CS Y
Sbjct: 22 ERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVS-LNIVGLSMRQEEKPCSYYMRT 80
Query: 309 GICKFGPTCRFDH 321
G+CKFG C+F H
Sbjct: 81 GLCKFGVACKFHH 93
Score = 62.0 bits (149), Expect = 6e-07, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE---LPERNGQPD 94
V S + R G+PDC +Y +T C YGS C+++H L R +
Sbjct: 14 VDTISEFLERIGQPDCGYYLKTRTCKYGSICKYHHSRDRLDAGPVSLNIVGLSMRQEEKP 73
Query: 95 CGYYLKTGTCKYGSTCKYHH 114
C YY++TG CK+G CK+HH
Sbjct: 74 CSYYMRTGLCKFGVACKFHH 93
Score = 42.7 bits (99), Expect = 0.36, Method: Composition-based stats.
Identities = 21/53 (39%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 223 YSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 275
+ SR++ D G +S + L R ++ C YYM TG CK+G CKFHH
Sbjct: 47 HHSRDRLDAGP------VSLNIVGLSMRQEEKPCSYYMRTGLCKFGVACKFHH 93
Score = 39.3 bits (90), Expect = 3.5, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 22/37 (59%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
R E C +Y RTGLC +G C+F+H A+ G YR
Sbjct: 68 RQEEKPCSYYMRTGLCKFGVACKFHHLQPASIGTGYR 104
>gi|413950617|gb|AFW83266.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 333
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 103/338 (30%), Positives = 135/338 (39%), Gaps = 109/338 (32%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DC-------------------------GYYLKTGTCKYGSTCKYHHPKDRNGAGPV---- 124
C +Y KTG CK+G+ CK++HPKD + +
Sbjct: 76 ICVVRSYIAVIFFFSWHSPSFLGCPVFQFYAKTGKCKFGAICKFNHPKDIKTSPLIAKET 135
Query: 125 --------------SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP 170
+ N GLP+RQ E C +YM+TGSCK+G C+F+HP P
Sbjct: 136 IYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHPDRPG-----P 190
Query: 171 LTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGD 230
A + + + LPSS P+ P + +IY
Sbjct: 191 AADIAFMVPLVQATLPSS--------------------APIVPAVVEPLPMIY------- 223
Query: 231 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGP 290
P+RP + C +YM TG+CKY CKFHHP R A + N P
Sbjct: 224 -----------------PQRPGETVCDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDP 266
Query: 291 ------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP R C+ Y G+C+FG C+FDHP
Sbjct: 267 QQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 304
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 81/191 (42%), Gaps = 68/191 (35%)
Query: 38 VAQASPYPARPGEPDCL-------------------------FYRRTGLCGYGSNCRFNH 72
+A ++ P RP EP C+ FY +TG C +G+ C+FNH
Sbjct: 62 IADSAVLPVRPSEPICVVRSYIAVIFFFSWHSPSFLGCPVFQFYAKTGKCKFGAICKFNH 121
Query: 73 P---------------------AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
P A A A + LP R G+ DC +Y+KTG+CKYGS C+
Sbjct: 122 PKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICR 181
Query: 112 YHHPKDRNGAGPVSFNI----------------------LGLPMRQDEKSCPYYMRTGSC 149
++HP A ++F + + P R E C +YM+TGSC
Sbjct: 182 FNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGETVCDFYMKTGSC 241
Query: 150 KFGVACKFHHP 160
K+ CKFHHP
Sbjct: 242 KYSQKCKFHHP 252
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 IWRLKIHDNQEGG--GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
I R H + G A + P R C FY R+G+C +G++C+F+HP
Sbjct: 253 ISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 304
>gi|168037437|ref|XP_001771210.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677451|gb|EDQ63921.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 278
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 98/320 (30%), Positives = 139/320 (43%), Gaps = 96/320 (30%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--------LPERNGQPDC 95
YP RPG+ C +Y T C +G CR++HPA G Q LP+R +PDC
Sbjct: 1 YPQRPGQKVCAYYMATRTCSFGVTCRYDHPA-CGTGGQVTAVGTPVDPCLLPQRPAEPDC 59
Query: 96 GYYLKTGTCKYGSTCKYHHPKDR-----------------NGAGPVSFNILGLPMR---- 134
Y++KTG C+YG C+++HPK++ G ++N GLP+R
Sbjct: 60 AYFMKTGECRYGPQCRFNHPKEKLEPSNTDDQYSAASSAAFGNPATAYNTNGLPLRPVTC 119
Query: 135 ----QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 190
Q E +C +Y +TGSCK G AC+++HP+ L + L N S+ ++P
Sbjct: 120 ARDVQGEGNCVFYGKTGSCKHGPACRYNHPE-ILLSMRMQLDNNLSV----KKIIPMQ-- 172
Query: 191 QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 250
LS + G + NQ
Sbjct: 173 --------------------LSRSLETGQSTCTQQSNQD--------------------- 191
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA---ASNIGPL-----GLPSRPGQAIC 302
++Y+ TG C +GA CKFHHP +RI A N G + GLP R +A C
Sbjct: 192 ------KFYIKTGECSFGATCKFHHPPDRIPTGIPKPAKNQGLVKLSLAGLPRRETEAPC 245
Query: 303 SNYSMYGICKFGPTCRFDHP 322
+ Y G CKFG TC++DHP
Sbjct: 246 AYYMKTGACKFGQTCKYDHP 265
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 75/146 (51%), Gaps = 29/146 (19%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAA-------QGAQYREELPER------NGQPDC 95
GE +C+FY +TG C +G CR+NHP ++ +P + GQ C
Sbjct: 125 GEGNCVFYGKTGSCKHGPACRYNHPEILLSMRMQLDNNLSVKKIIPMQLSRSLETGQSTC 184
Query: 96 -------GYYLKTGTCKYGSTCKYHHPKDR---------NGAGPVSFNILGLPMRQDEKS 139
+Y+KTG C +G+TCK+HHP DR G V ++ GLP R+ E
Sbjct: 185 TQQSNQDKFYIKTGECSFGATCKFHHPPDRIPTGIPKPAKNQGLVKLSLAGLPRRETEAP 244
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSL 165
C YYM+TG+CKFG CK+ HP P +
Sbjct: 245 CAYYMKTGACKFGQTCKYDHPPPQEI 270
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
P RPGQ +C+ Y C FG TCR+DHP G
Sbjct: 2 PQRPGQKVCAYYMATRTCSFGVTCRYDHPACG 33
>gi|108862478|gb|ABG21959.1| Zinc finger C-x8-C-x5-C-x3-H type family protein, expressed [Oryza
sativa Japonica Group]
Length = 488
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 87/261 (33%), Positives = 125/261 (47%), Gaps = 40/261 (15%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---AGPVSFNILGLPMRQDEKS 139
+E + E + Q +C YY G CK+G CKY H + G A V N LGLP+R EK
Sbjct: 230 KEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLGLPLRPGEKE 289
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPL----TGNASLGSM-GSSVLPSSG----- 189
CPYYMRTGSCK+ CKFHHP PS++ + P G+A + GSS P++
Sbjct: 290 CPYYMRTGSCKYATNCKFHHPDPSNVASKDPQLEHENGDAPQQDVQGSSSQPNASIWPDQ 349
Query: 190 ---------------------LQYAGIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRN 227
L G+ P P WN Y + P P + + + N
Sbjct: 350 RTVNEHHVPFIAPSPSYSAGMLPPQGMYPPPEWNGYHQVPLNPYYPPGVPFQHFPAAPIN 409
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
A S+ PERP QP+C++++ +G CK+ CK+HHP+ + + A
Sbjct: 410 HPMYKAPEIPGHQQVPSEEYPERPGQPECQHFVKSGFCKFRMKCKYHHPRSPVPPAGA-- 467
Query: 288 IGPLGLPSRPGQAICSNYSMY 308
+ PLGLP +P +CS + ++
Sbjct: 468 LSPLGLPIKP---VCSFFHLF 485
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 22/210 (10%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP---QPSSLGTALPLTGNASLGSMGSSVLPS 187
P R E C YY++ GSC+FG+ CKF+HP + S + + +G+ S +
Sbjct: 105 FPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKKKSRVKGSNGGSGSGGSNSSSNKASSP 164
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPT---SIAGS-----NLIYSSRNQGDLGAG----A 235
Q P + +Y+ +I P + + GS N S D+ G
Sbjct: 165 DDEQ----APKEEYGSYVPDISPEVDSLGFADKGSASNLENFKKYSYEIIDVKKGRVEPK 220
Query: 236 QMHILSASSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLG 292
++ + + + E Q +C+YY G CK+G CK+ H KE + ++ LG
Sbjct: 221 ELKVAKEKRKEFISEGSSQEECKYYSTPGGCKFGKACKYLHRDGKEGKTDAEKVDLNFLG 280
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RPG+ C Y G CK+ C+F HP
Sbjct: 281 LPLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
R P R G+PDC YY+K G+C++G CK++HP +
Sbjct: 102 RPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARKK 138
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
S P RP +PDC YY+ G+C++G CKF+HP +
Sbjct: 101 SRPRFPRRPGEPDCTYYVKFGSCRFGMKCKFNHPARK 137
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C Y +NC+F+HP
Sbjct: 282 PLRPGEKECPYYMRTGSCKYATNCKFHHP 310
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C + C+++HP
Sbjct: 429 YPERPGQPECQHFVKSGFCKFRMKCKYHHP 458
>gi|414881850|tpg|DAA58981.1| TPA: hypothetical protein ZEAMMB73_531605 [Zea mays]
Length = 310
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 95/323 (29%), Positives = 129/323 (39%), Gaps = 87/323 (26%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREE----------LPERNGQPDCGYYLKTGTC 104
Y + C + S C+FNHP R + LP R +P C +Y KTG C
Sbjct: 14 IYLLSSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKC 73
Query: 105 KYGSTCKYHHPKDRNGAGPV-------------------------------------SFN 127
K+G+ CK++HPK + P + N
Sbjct: 74 KFGAVCKFNHPKLEDIKTPSLIAKETIYRATTDAAAHIGGTDDSVPAKTHAPIAPAEAHN 133
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
GLP+R E C +YM+TGSCK+G C+F+HP S + A A+L P
Sbjct: 134 AKGLPIRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMAPVQATLP------FP- 186
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL 247
A IVPA N +N + S M ++
Sbjct: 187 -----APIVPAVALN--------------PAANFLQSFDFHATHVPVEPMPMI------Y 221
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPGQ 299
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 222 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 281
Query: 300 AICSNYSMYGICKFGPTCRFDHP 322
C+ Y G C FG C+FDHP
Sbjct: 282 EACAFYMRSGTCGFGARCKFDHP 304
Score = 115 bits (288), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 81/167 (48%), Gaps = 51/167 (30%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP-------AYAAQ------------------- 78
P RPGE DC FY +TG C YGS CRFNHP A+ A
Sbjct: 138 PIRPGEVDCSFYMKTGSCKYGSICRFNHPDRSVVDIAFMAPVQATLPFPAPIVPAVALNP 197
Query: 79 GAQYREEL----------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-- 120
A + + P+R G+ C +Y+KTG+CKY CK+HHP DR+
Sbjct: 198 AANFLQSFDFHATHVPVEPMPMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPH 257
Query: 121 -------AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
PV+ + GLP R+D ++C +YMR+G+C FG CKF HP
Sbjct: 258 SKENEDTQQPVALTLAGLPRREDAEACAFYMRSGTCGFGARCKFDHP 304
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 110/271 (40%), Gaps = 79/271 (29%)
Query: 98 YLKTGTCKYGSTCKYHHPKD-------RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCK 150
YL + CK+ S CK++HPK+ R + + LP+R E C +Y +TG CK
Sbjct: 15 YLLSSRCKFKSKCKFNHPKEMVNALGTRTDNESLIADTTILPVRPSEPVCSFYAKTGKCK 74
Query: 151 FGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGP 210
FG CKF+HP+ L + + L + Y A
Sbjct: 75 FGAVCKFNHPK---------------LEDIKTPSLIAKETIYRATTDAAAH--------- 110
Query: 211 LSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
I G++ ++ + A A+ H +++ LP RP + DC +YM TG+CKYG+
Sbjct: 111 -----IGGTDDSVPAKTHAPI-APAEAH----NAKGLPIRPGEVDCSFYMKTGSCKYGSI 160
Query: 271 CKFHHPKERIAQSA-----------------------ASNI---------------GPLG 292
C+F+HP + A A+N P+
Sbjct: 161 CRFNHPDRSVVDIAFMAPVQATLPFPAPIVPAVALNPAANFLQSFDFHATHVPVEPMPMI 220
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
P RPG+ +C Y G CK+ C+F HP+
Sbjct: 221 YPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 251
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE-----------LPERNG 91
YP RPGE C FY +TG C Y NC+F+HP +A ++ E+ LP R
Sbjct: 221 YPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRRED 280
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y+++GTC +G+ CK+ HP
Sbjct: 281 AEACAFYMRSGTCGFGARCKFDHP 304
>gi|357154781|ref|XP_003576899.1| PREDICTED: zinc finger CCCH domain-containing protein 65-like
[Brachypodium distachyon]
Length = 524
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/337 (28%), Positives = 155/337 (45%), Gaps = 60/337 (17%)
Query: 26 RLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE 85
LK+ + V++ S + +C +Y+ G C +G +C++ HP + A+ E
Sbjct: 203 ELKVAKEKRRDTVSEGS------AQEECKYYKTFGGCKFGKSCKYLHPGGKERKAEVEEV 256
Query: 86 ------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP------------KDRNGAGPVSFN 127
LP R G +C YY++TG+C+Y + C++HHP + NG N
Sbjct: 257 ELNFLGLPIRPGGKECQYYMRTGSCRYATNCRFHHPDPTNVASREPVLEHENGGDIPQQN 316
Query: 128 ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
+ G P + + P RT + F P PS +P G ++P
Sbjct: 317 VQG-PSQPNVSIWPADQRTLNEHHA---PFLAPAPSYSAGMIPPQG----------MIPP 362
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIY----SSRNQGDLGAGAQMHILSAS 243
G+ P P W+ Y + PLSP G+ + +Q GA H
Sbjct: 363 QGM-----YPTPEWSGY--HQVPLSPYYPPGTPFHHFPGPPVNHQIYRGADVPGH-QQLP 414
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSA-----ASNIGPLGLPSRPG 298
S PERP QP+C++++ +G CK+G CK+HHP+ + + A + PLGLP +P
Sbjct: 415 SDEYPERPGQPECQHFVKSGYCKFGVKCKYHHPRSLMPRPPPPPPQAGTLSPLGLPLKPD 474
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 335
Q +C+ Y YG+CK+GP C ++HP+ N+G +P
Sbjct: 475 QPVCTYYGRYGVCKYGPACLYNHPF-----NFGHPVP 506
Score = 85.1 bits (209), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 90/203 (44%), Gaps = 12/203 (5%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM----GSSVLP 186
P R E C YY+R G+C+FG+ CKF+HP A + S P
Sbjct: 91 FPRRPAEPDCTYYIRFGTCRFGMKCKFNHPARRKKNRAKGSGSSGSSNKASSPPDDDQTP 150
Query: 187 SSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG----AQMHILSA 242
+ + +G + S +S +G +L+ +S D+ G ++ +
Sbjct: 151 KEEYEEDLVPDIAAEVDSLGFVNKGSKSSNSG-DLMKTSYEVIDVKKGQMEPKELKVAKE 209
Query: 243 SSQN-LPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQ 299
++ + E Q +C+YY G CK+G CK+ HP KER A+ + LGLP RPG
Sbjct: 210 KRRDTVSEGSAQEECKYYKTFGGCKFGKSCKYLHPGGKERKAEVEEVELNFLGLPIRPGG 269
Query: 300 AICSNYSMYGICKFGPTCRFDHP 322
C Y G C++ CRF HP
Sbjct: 270 KECQYYMRTGSCRYATNCRFHHP 292
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 59/98 (60%), Gaps = 12/98 (12%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD--------RNGAGPVSFNILGLPMRQ 135
+E PER GQP+C +++K+G CK+G CKYHHP+ AG + + LGLP++
Sbjct: 416 DEYPERPGQPECQHFVKSGYCKFGVKCKYHHPRSLMPRPPPPPPQAG--TLSPLGLPLKP 473
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG 173
D+ C YY R G CK+G AC ++H P + G +P G
Sbjct: 474 DQPVCTYYGRYGVCKYGPACLYNH--PFNFGHPVPAAG 509
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 60/154 (38%), Gaps = 37/154 (24%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG------------------------ 79
+P RP EPDC +Y R G C +G C+FNHPA +
Sbjct: 91 FPRRPAEPDCTYYIRFGTCRFGMKCKFNHPARRKKNRAKGSGSSGSSNKASSPPDDDQTP 150
Query: 80 -AQYREEL-PERNGQPDCGYYLKTGTCKYGS----TCKYHHPKDRNGAGPVSFNILGLPM 133
+Y E+L P+ + D ++ G+ S Y + G +
Sbjct: 151 KEEYEEDLVPDIAAEVDSLGFVNKGSKSSNSGDLMKTSYEVIDVKKGQMEPKELKVAKEK 210
Query: 134 RQD-------EKSCPYYMRTGSCKFGVACKFHHP 160
R+D ++ C YY G CKFG +CK+ HP
Sbjct: 211 RRDTVSEGSAQEECKYYKTFGGCKFGKSCKYLHP 244
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
+S S P RP +PDC YY+ GTC++G CKF+HP R
Sbjct: 84 VSDSGPRFPRRPAEPDCTYYIRFGTCRFGMKCKFNHPARR 123
>gi|242033337|ref|XP_002464063.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
gi|241917917|gb|EER91061.1| hypothetical protein SORBIDRAFT_01g011590 [Sorghum bicolor]
Length = 1390
Score = 135 bits (341), Expect = 3e-29, Method: Composition-based stats.
Identities = 103/368 (27%), Positives = 134/368 (36%), Gaps = 144/368 (39%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ-----------------------GA 80
YP RPG+ +C FY TG C YGS+C FNHP A+ G
Sbjct: 1026 YPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNRVGL 1085
Query: 81 QYREE------------------------------LPERNGQPDCGYYLKTGTCKYGSTC 110
RE+ PER P+C + L+ G C++GS+C
Sbjct: 1086 PIREDPDWASASDDSDGCCSADSSDGPLCKQEHGGYPER---PECPFLLRFGNCRFGSSC 1142
Query: 111 KYHHPKDRNGAG--------------------------PVSFNILGLPMRQDEKSCPYYM 144
+Y+HPKD+ + +S ++ P R E CP+Y+
Sbjct: 1143 QYYHPKDKVSSTYHPKDKFQSRYHPKEKSSRYHPKKEPALSGELMVYPDRPGEPECPFYV 1202
Query: 145 RTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTY 204
+TGSCKFG CKFHHP+ + PS
Sbjct: 1203 KTGSCKFGANCKFHHPK---------------------DIAPSMQ--------------- 1226
Query: 205 MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGT 264
GP SP +N + A + Q PERP QPDCRYYM G
Sbjct: 1227 ----GPASPKRSVAAN-------EHHPAARTTLQDQMYQQQKYPERPGQPDCRYYMQFGK 1275
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
CK+ + C F+HPK L S A C Y G C+FG C F HP
Sbjct: 1276 CKFESACIFNHPK---------------LSSGWHLAECPFYMKTGSCQFGSACEFYHPKV 1320
Query: 325 GYPINYGL 332
P G+
Sbjct: 1321 RCPSRGGV 1328
Score = 132 bits (333), Expect = 2e-28, Method: Composition-based stats.
Identities = 83/283 (29%), Positives = 123/283 (43%), Gaps = 94/283 (33%)
Query: 28 KIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQ------ 81
+ H +E + YP RPGEP+C FY +TG C +G+NC+F+HP A Q
Sbjct: 1173 RYHPKKEPALSGELMVYPDRPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQGPASPK 1232
Query: 82 ---------------------YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+++ PER GQPDC YY++ G CK+ S C ++HPK +G
Sbjct: 1233 RSVAANEHHPAARTTLQDQMYQQQKYPERPGQPDCRYYMQFGKCKFESACIFNHPKLSSG 1292
Query: 121 AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSM 180
CP+YM+TGSC+FG AC+F+HP+
Sbjct: 1293 --------------WHLAECPFYMKTGSCQFGSACEFYHPKVRC---------------- 1322
Query: 181 GSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHIL 240
PS G G++ + G + S+N +L
Sbjct: 1323 -----PSRG----GVIDGTDY----------------GHDFATKSQN-----------VL 1346
Query: 241 SASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 282
Q + PERP + +C +YM G CK+ +CKFHHP++R+ +
Sbjct: 1347 QQHEQAIYPERPGELECPHYMKHGYCKFQMNCKFHHPRDRLPK 1389
Score = 110 bits (275), Expect = 1e-21, Method: Composition-based stats.
Identities = 79/310 (25%), Positives = 122/310 (39%), Gaps = 117/310 (37%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSF--------------NIL 129
E P+R G+ +C +Y+ TG+C YGS+C ++HP+ + SF N +
Sbjct: 1024 EGYPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNRV 1083
Query: 130 GLPMRQD---------------------------------EKSCPYYMRTGSCKFGVACK 156
GLP+R+D CP+ +R G+C+FG +C+
Sbjct: 1084 GLPIREDPDWASASDDSDGCCSADSSDGPLCKQEHGGYPERPECPFLLRFGNCRFGSSCQ 1143
Query: 157 FHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSI 216
++HP+ + S+ P Q + P + Y P ++
Sbjct: 1144 YYHPK----------------DKVSSTYHPKDKFQ-SRYHPKEKSSRYH----PKKEPAL 1182
Query: 217 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+G ++Y P+RP +P+C +Y+ TG+CK+GA+CKFHHP
Sbjct: 1183 SGELMVY------------------------PDRPGEPECPFYVKTGSCKFGANCKFHHP 1218
Query: 277 KERIAQSAASNIGP------------------------LGLPSRPGQAICSNYSMYGICK 312
K+ IA S P P RPGQ C Y +G CK
Sbjct: 1219 KD-IAPSMQGPASPKRSVAANEHHPAARTTLQDQMYQQQKYPERPGQPDCRYYMQFGKCK 1277
Query: 313 FGPTCRFDHP 322
F C F+HP
Sbjct: 1278 FESACIFNHP 1287
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 56/235 (23%), Positives = 89/235 (37%), Gaps = 49/235 (20%)
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSG 189
G P R + +C +YM TGSC +G +C F+HP+ + + L G
Sbjct: 1025 GYPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNRVG 1084
Query: 190 LQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPE 249
L I P W S+ + D A Q
Sbjct: 1085 LP---IREDPDWA---------------------SASDDSDGCCSADSSDGPLCKQEHGG 1120
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS---------------AASNIGP---- 290
P++P+C + + G C++G+ C+++HPK++++ + +S P
Sbjct: 1121 YPERPECPFLLRFGNCRFGSSCQYYHPKDKVSSTYHPKDKFQSRYHPKEKSSRYHPKKEP 1180
Query: 291 ------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
+ P RPG+ C Y G CKFG C+F HP P G + P S+
Sbjct: 1181 ALSGELMVYPDRPGEPECPFYVKTGSCKFGANCKFHHPKDIAPSMQGPASPKRSV 1235
Score = 54.7 bits (130), Expect = 8e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 52/128 (40%), Gaps = 52/128 (40%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ--------------------- 282
S+ P+RP + +CR+YM+TG+C YG+ C F+HP+ +
Sbjct: 1023 SEGYPQRPGKLNCRFYMSTGSCSYGSSCHFNHPRLKAKLEVSSFPSEQRNHEVEFLELNR 1082
Query: 283 ----------------------SAASNIGPL------GLPSRPGQAICSNYSMYGICKFG 314
SA S+ GPL G P RP C +G C+FG
Sbjct: 1083 VGLPIREDPDWASASDDSDGCCSADSSDGPLCKQEHGGYPERPE---CPFLLRFGNCRFG 1139
Query: 315 PTCRFDHP 322
+C++ HP
Sbjct: 1140 SSCQYYHP 1147
>gi|224032243|gb|ACN35197.1| unknown [Zea mays]
Length = 429
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 116/249 (46%), Gaps = 34/249 (13%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKS 139
+E E N Q +C YY G CK+G TCKY H + G V N LGLP+R EK
Sbjct: 79 KETFAEGNTQEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKE 138
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL---QY 192
CPYYMRTGSCKF CKFHHP P++ + P G+ L ++ S PS + Q
Sbjct: 139 CPYYMRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQR 198
Query: 193 A-----------------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQ 228
A G+ P+ W+ Y + P P + + + N
Sbjct: 199 ALNEQHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNH 258
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
A S PERP QP+C++++ +G CKY C++HHP+ R + + +
Sbjct: 259 PMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGL 318
Query: 289 GPLGLPSRP 297
P+GLP +P
Sbjct: 319 SPIGLPIKP 327
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 256 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 315
Query: 124 VSFNILGLPMR 134
+ +GLP++
Sbjct: 316 AGLSPIGLPIK 326
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--SNIGPLGLPSRPGQAICSNYSMYGI 310
Q +C+YY G CK+G CK+ H + ++ + + LGLP RPG+ C Y G
Sbjct: 88 QEECKYYSTPGGCKFGKTCKYLHREGNGGKTEVEKAELNFLGLPLRPGEKECPYYMRTGS 147
Query: 311 CKFGPTCRFDHP 322
CKF C+F HP
Sbjct: 148 CKFATNCKFHHP 159
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE +C +Y RTG C + +NC+F+HP
Sbjct: 131 PLRPGEKECPYYMRTGSCKFATNCKFHHP 159
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C Y CR++HP
Sbjct: 277 YPERPGQPECQHFVKSGFCKYRMKCRYHHP 306
>gi|414872185|tpg|DAA50742.1| TPA: hypothetical protein ZEAMMB73_704527 [Zea mays]
Length = 741
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/266 (30%), Positives = 117/266 (43%), Gaps = 96/266 (36%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---------------------YAAQGAQY 82
YP RP EPDC FY +TG C +G+NC+F+HP +AA A
Sbjct: 540 YPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRSVAAKEHHAAARATL 599
Query: 83 REEL------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG--PVSFNILGLPMR 134
++++ PER GQPDC YY++ G CK+ S C ++H KD +G P
Sbjct: 600 QDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSGWHPA---------- 649
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 194
CP+YM+T +C+FG AC+F+HP+ G G
Sbjct: 650 ----ECPFYMKTRTCQFGSACEFYHPKDRCSGR-------------------------GG 680
Query: 195 IVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQP 254
++ + G + SRN ++ I PERPD+
Sbjct: 681 VIDGTDY----------------GHDFATKSRN-----VLQELAI-------YPERPDEL 712
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERI 280
+C +YM G CKY +CKFHHP++R+
Sbjct: 713 ECSHYMKHGYCKYKMNCKFHHPRDRL 738
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 122/323 (37%), Gaps = 126/323 (39%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR---------------------- 118
Q E+ PER P+C + L+ G CK+ S+C+Y+HPKD+
Sbjct: 467 QEHEDYPER---PECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSS 523
Query: 119 ----NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN 174
+S ++ P R E CP+Y++TGSCKFG CKFHHP+ +T N
Sbjct: 524 RHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKD--------ITPN 575
Query: 175 ASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG 234
GP SP + +++ A
Sbjct: 576 MQ--------------------------------GPASPKRSVAAKEHHAA-------AR 596
Query: 235 AQMHILSASSQNLPERPDQPDCRYYMNTG------------------------------- 263
A + Q PERP QPDCRYYM G
Sbjct: 597 ATLQDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSGWHPAECPFYMK 656
Query: 264 --TCKYGADCKFHHPKER----------------IAQSAASNIGPLGL-PSRPGQAICSN 304
TC++G+ C+F+HPK+R A + + + L + P RP + CS+
Sbjct: 657 TRTCQFGSACEFYHPKDRCSGRGGVIDGTDYGHDFATKSRNVLQELAIYPERPDELECSH 716
Query: 305 YSMYGICKFGPTCRFDHPYAGYP 327
Y +G CK+ C+F HP P
Sbjct: 717 YMKHGYCKYKMNCKFHHPRDRLP 739
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 150/396 (37%), Gaps = 87/396 (21%)
Query: 6 QVKSNAVANQSADNIEEAIWRLKIHDNQ---EGGGVAQASPYPARPGEPDCLFYRRTGLC 62
Q + AV ++D + + D + E G+++ YP +PG+ +C FY TG C
Sbjct: 242 QDQDEAVEQCTSDQLRTITDGNDVEDQEVHREKVGLSEG--YPQKPGKLNCRFYMSTGRC 299
Query: 63 GYGSNCRFNHPAYAAQ-------------GAQY----REELPERNGQPDCGYYLKTGTCK 105
YGS+C FNHP A+ A++ R LP R G C YY++ GTC+
Sbjct: 300 SYGSSCHFNHPRLKAKLEVSSFPSEQRNHEAEFLELNRVGLPIREGARKCIYYMRNGTCR 359
Query: 106 YGSTCKYHHPK---DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP 162
YG C ++HP+ D ++ L K P + G P
Sbjct: 360 YGKKCCFNHPEQVLDVQRHTATGWDDTNLQSSPHSKKSPEHKTMDDISSGSEVL----PP 415
Query: 163 SSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLI 222
+ L LP +V PS+ + I P W
Sbjct: 416 NILRMLLP----------PQNVPPSTKEKEIRIKKDPDW--------------------- 444
Query: 223 YSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-- 280
S+ + D A Q + P++P+C + + G CK+ + C+++HPK++
Sbjct: 445 ASASDDSDGCCSADSSDGPLCKQEHEDYPERPECPFLLRFGNCKFASSCQYYHPKDKFPS 504
Query: 281 -------------AQSAASNIGP----------LGLPSRPGQAICSNYSMYGICKFGPTC 317
+ +S P + P RP + C Y G CKFG C
Sbjct: 505 TYHPEDKFQSRYHQKEKSSRHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANC 564
Query: 318 RFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISAT 353
+F HP P G + P S+ ++ +H A AT
Sbjct: 565 KFHHPKDITPNMQGPASPKRSV--AAKEHHAAARAT 598
>gi|219888781|gb|ACL54765.1| unknown [Zea mays]
gi|414879021|tpg|DAA56152.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 192
Score = 127 bits (318), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 62/118 (52%), Positives = 77/118 (65%), Gaps = 7/118 (5%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA---YAA 77
EE +W+ D+ G Q YP RPGEPDC +Y RTGLC +G +CRFNHP A
Sbjct: 50 EEGMWQQMAMDS---GATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAI 106
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMR 134
A+ + E PER GQP+C YYLKTGTCK+G TCK+HHP+++ G AG V N G P+R
Sbjct: 107 ASARMKGEYPERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLR 164
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 52/75 (69%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
PER G+PDC YYL+TG C++G +C+++HP DRN A + P R + C YY++T
Sbjct: 71 PERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARMKGEYPERAGQPECQYYLKT 130
Query: 147 GSCKFGVACKFHHPQ 161
G+CKFG CKFHHP+
Sbjct: 131 GTCKFGPTCKFHHPR 145
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 232 GAGAQMHILSASSQ---NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASN 287
G QM + S ++ + PERP +PDC YY+ TG C++G C+F+HP +R +A ++A
Sbjct: 52 GMWQQMAMDSGATMQPGSYPERPGEPDCTYYLRTGLCRFGMSCRFNHPPDRNLAIASARM 111
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
G P R GQ C Y G CKFGPTC+F HP
Sbjct: 112 KG--EYPERAGQPECQYYLKTGTCKFGPTCKFHHP 144
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 297
PER QP+C+YY+ TGTCK+G CKFHHP+E+ + + G P RP
Sbjct: 116 PERAGQPECQYYLKTGTCKFGPTCKFHHPREKAGIAGRVQLNTSGYPLRP 165
>gi|215767260|dbj|BAG99488.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 237
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 64/152 (42%), Positives = 84/152 (55%), Gaps = 17/152 (11%)
Query: 194 GIVPAPGWNTYMGNIGPLSPTSIA----GSNLIYSSRNQGDLGAGAQMHILSASSQN--- 246
G+V P WN+Y G + P+S + G+ Y + Q D AG Q + S +
Sbjct: 57 GLVQVPSWNSYTGQMMPVSSSESRLQSPGAQQTYGTSQQVDASAGNQGMLSPYRSSSYPV 116
Query: 247 ----------LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR 296
PERPDQP+C+YYM TG CK+GA CKFHHP+ R + + P+GLP R
Sbjct: 117 PQYALQRENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLR 176
Query: 297 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
PG+ +C YS YGICKFG C+FDHP P+
Sbjct: 177 PGEELCKFYSRYGICKFGANCKFDHPTMAPPM 208
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 12/114 (10%)
Query: 73 PAYAAQGAQYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILG 130
P YA Q RE + PER QP+C YY+KTG CK+G+ CK+HHP+ R+ P + +G
Sbjct: 117 PQYALQ----RENVFPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVG 172
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 184
LP+R E+ C +Y R G CKFG CKF HP T P G + GS ++V
Sbjct: 173 LPLRPGEELCKFYSRYGICKFGANCKFDHP------TMAPPMGVYAYGSASTNV 220
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----AQYREELPERNGQPDCGYYL 99
+P RP +P+C +Y +TG C +G+ C+F+HP + LP R G+ C +Y
Sbjct: 127 FPERPDQPECQYYMKTGDCKFGAVCKFHHPRVRSMPTPDCVLSPVGLPLRPGEELCKFYS 186
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CK+G+ CK+ HP
Sbjct: 187 RYGICKFGANCKFDHP 202
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
P RPGE C FY R G+C +G+NC+F+HP A
Sbjct: 174 PLRPGEELCKFYSRYGICKFGANCKFDHPTMA 205
>gi|125525255|gb|EAY73369.1| hypothetical protein OsI_01247 [Oryza sativa Indica Group]
Length = 324
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 88/245 (35%), Positives = 123/245 (50%), Gaps = 42/245 (17%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQ----PSSLGTALPLTG--------NASLGS--M 180
Q EK C YYM+TG CKFG CKFHHP+ P + G PL ASL + M
Sbjct: 2 QGEKECSYYMKTGQCKFGTTCKFHHPEFGGVPMNPGIYPPLQSPSIASPHPYASLANWQM 61
Query: 181 GSS-VLPSS--------GLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNL----IYSSRN 227
G V+P S + +G++P GW+ Y ++ P+ + A N+ +Y +
Sbjct: 62 GRPPVVPGSYIPGSYTPMMLSSGMIPLQGWSPYPASVNPVV-SGGAQQNVQAGPVYGMGH 120
Query: 228 QGDLGA----GAQMHILSASSQN--------LPERPDQPDCRYYMNTGTCKYGADCKFHH 275
G G + S++ Q+ PERP QPDC+YYM TG CK+GA CK+HH
Sbjct: 121 HGSSSTIAYGGPYVPYASSTGQSSNNQQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHH 180
Query: 276 PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 335
P+E A + + L LP RPG C+ Y+ G C++G C++DHP + Y S
Sbjct: 181 PRELSAPKSGYMVNSLCLPLRPGAQPCAYYAQNGYCRYGVACKYDHPMGT--LGYSPSAL 238
Query: 336 PLSIL 340
PLS +
Sbjct: 239 PLSDM 243
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
Q PER GQPDC YY++TG CK+G+TCKYHHP++ + N L LP+R +
Sbjct: 147 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 206
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLG---TALPLT 172
C YY + G C++GVACK+ HP +LG +ALPL+
Sbjct: 207 CAYYAQNGYCRYGVACKYDHPM-GTLGYSPSALPLS 241
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 152 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 211
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 212 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 245
Score = 38.5 bits (88), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAY 75
GE +C +Y +TG C +G+ C+F+HP +
Sbjct: 3 GEKECSYYMKTGQCKFGTTCKFHHPEF 29
>gi|219362557|ref|NP_001136614.1| uncharacterized protein LOC100216738 [Zea mays]
gi|194696378|gb|ACF82273.1| unknown [Zea mays]
Length = 339
Score = 124 bits (311), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 120/278 (43%), Gaps = 92/278 (33%)
Query: 30 HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--------------- 74
H +E + YP RP EPDC FY +TG C +G+NC+F+HP
Sbjct: 124 HPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRS 183
Query: 75 ------YAAQGAQYREEL------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
+AA A ++++ PER GQPDC YY++ G CK+ S C ++H KD +G
Sbjct: 184 VAAKEHHAAARATLQDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSG 243
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS 182
CP+YM+T +C+FG AC+F+HP+ G
Sbjct: 244 ------------WHPAECPFYMKTRTCQFGSACEFYHPKDRCSGR--------------- 276
Query: 183 SVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSA 242
G++ + G + SRN ++ I
Sbjct: 277 ----------GGVIDGTDY----------------GHDFATKSRN-----VLQELAI--- 302
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 280
PERPD+ +C +YM G CKY +CKFHHP++R+
Sbjct: 303 ----YPERPDELECSHYMKHGYCKYKMNCKFHHPRDRL 336
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 122/323 (37%), Gaps = 126/323 (39%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR---------------------- 118
Q E+ PER P+C + L+ G CK+ S+C+Y+HPKD+
Sbjct: 65 QEHEDYPER---PECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSS 121
Query: 119 ----NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN 174
+S ++ P R E CP+Y++TGSCKFG CKFHHP+ +T N
Sbjct: 122 RHHPKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKD--------ITPN 173
Query: 175 ASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAG 234
GP SP + +++ A
Sbjct: 174 MQ--------------------------------GPASPKRSVAAKEHHAA-------AR 194
Query: 235 AQMHILSASSQNLPERPDQPDCRYYMNTG------------------------------- 263
A + Q PERP QPDCRYYM G
Sbjct: 195 ATLQDQMYQQQKFPERPGQPDCRYYMQFGKCKFQSACIFNHSKDILSSGWHPAECPFYMK 254
Query: 264 --TCKYGADCKFHHPKER----------------IAQSAASNIGPLGL-PSRPGQAICSN 304
TC++G+ C+F+HPK+R A + + + L + P RP + CS+
Sbjct: 255 TRTCQFGSACEFYHPKDRCSGRGGVIDGTDYGHDFATKSRNVLQELAIYPERPDELECSH 314
Query: 305 YSMYGICKFGPTCRFDHPYAGYP 327
Y +G CK+ C+F HP P
Sbjct: 315 YMKHGYCKYKMNCKFHHPRDRLP 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 58/134 (43%), Gaps = 27/134 (20%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI---------------AQSAASNIG 289
Q + P++P+C + + G CK+ + C+++HPK++ + +S
Sbjct: 65 QEHEDYPERPECPFLLRFGNCKFASSCQYYHPKDKFPSTYHPEDKFQSRYHQKEKSSRHH 124
Query: 290 P----------LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
P + P RP + C Y G CKFG C+F HP P G + P S+
Sbjct: 125 PKKEPALSGELMVYPDRPSEPDCPFYVKTGSCKFGANCKFHHPKDITPNMQGPASPKRSV 184
Query: 340 LDSSLMNHQAISAT 353
++ +H A AT
Sbjct: 185 --AAKEHHAAARAT 196
>gi|223993851|ref|XP_002286609.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977924|gb|EED96250.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 622
Score = 121 bits (303), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/194 (37%), Positives = 107/194 (55%), Gaps = 21/194 (10%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG---PVSFNILGLPMRQDEKSCPYY 143
P+R+G+PDC YL+TG CKYG +CKY+HP + G P++ P+R E C Y+
Sbjct: 9 PQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPPCQYF 68
Query: 144 MRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNT 203
++ G+CKFG +CKF+HP + + + + G G+ LP AG+V
Sbjct: 69 LKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEGCGGTANG--LP------AGLV------- 113
Query: 204 YMGNIGPLSPTSIAGSNLIYSSRNQG-DLGAGAQMHILSASSQNLPERPDQPDCRYYMNT 262
++ +P+ SN ++ R G D + M S+S Q LP+RP +P+C Y++
Sbjct: 114 FLTTTNNSTPSYTVDSNGVF--RQSGSDAHVSSLMAAASSSVQVLPQRPTEPNCIYFLRN 171
Query: 263 GTCKYGADCKFHHP 276
G CKYGA CKFHHP
Sbjct: 172 GRCKYGATCKFHHP 185
Score = 81.6 bits (200), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR------EELPERNGQPD 94
+PYP R GEPDC Y RTG C YG +C++NHP G + P R +P
Sbjct: 5 TTPYPQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPP 64
Query: 95 CGYYLKTGTCKYGSTCKYHHP 115
C Y+LK GTCK+G +CK++HP
Sbjct: 65 CQYFLKHGTCKFGQSCKFNHP 85
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 2/80 (2%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS--NIGPLGLPSRPGQAICSNY 305
P+R +PDCR Y+ TG CKYG CK++HP + N G P RP + C +
Sbjct: 9 PQRSGEPDCRDYLRTGRCKYGESCKYNHPPNVESGGGVKPLNPGEPMFPIRPTEPPCQYF 68
Query: 306 SMYGICKFGPTCRFDHPYAG 325
+G CKFG +C+F+HP G
Sbjct: 69 LKHGTCKFGQSCKFNHPAGG 88
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 33 QEGGGVAQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA------YAAQGAQY 82
+ GGGV +P +P RP EP C ++ + G C +G +C+FNHPA + A G +
Sbjct: 41 ESGGGVKPLNPGEPMFPIRPTEPPCQYFLKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEG 100
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS--------------FNI 128
NG P +L T ST Y D NG S ++
Sbjct: 101 CGGTA--NGLPAGLVFLTTTN---NSTPSYT--VDSNGVFRQSGSDAHVSSLMAAASSSV 153
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
LP R E +C Y++R G CK+G CKFHHP
Sbjct: 154 QVLPQRPTEPNCIYFLRNGRCKYGATCKFHHP 185
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 26/32 (81%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
LP+R +P+C Y+L+ G CKYG+TCK+HHP D
Sbjct: 156 LPQRPTEPNCIYFLRNGRCKYGATCKFHHPID 187
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 46/130 (35%), Gaps = 54/130 (41%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS----------AASNIGPLGL--- 293
P RP +P C+Y++ GTCK+G CKF+HP + S +N P GL
Sbjct: 56 FPIRPTEPPCQYFLKHGTCKFGQSCKFNHPAGGVVDSHVAVGGEGCGGTANGLPAGLVFL 115
Query: 294 -----------------------------------------PSRPGQAICSNYSMYGICK 312
P RP + C + G CK
Sbjct: 116 TTTNNSTPSYTVDSNGVFRQSGSDAHVSSLMAAASSSVQVLPQRPTEPNCIYFLRNGRCK 175
Query: 313 FGPTCRFDHP 322
+G TC+F HP
Sbjct: 176 YGATCKFHHP 185
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
P RP EP+C+++ R G C YG+ C+F+HP A+
Sbjct: 157 PQRPTEPNCIYFLRNGRCKYGATCKFHHPIDTAK 190
>gi|222635668|gb|EEE65800.1| hypothetical protein OsJ_21508 [Oryza sativa Japonica Group]
Length = 830
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 26/159 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEPDC +Y + G C +G +C +NHP + A + E+ P R G+PDC YY+
Sbjct: 184 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYV 243
Query: 100 KTGTCKYGSTCKYHHP----------------------KDRNGAGPVSFNILGLPMRQDE 137
K G+CK+G C+++HP + ++ V N+LGLP+R
Sbjct: 244 KFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT 303
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
C YYM G CKFG CKF HP P S ++ NA+
Sbjct: 304 GLCSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNAN 342
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 54/106 (50%), Gaps = 27/106 (25%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP------------------------KER 279
++ P RP +PDC YY+ G+CK+G +C+F+HP K +
Sbjct: 227 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 286
Query: 280 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
+ Q + LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 287 VEQV---KLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 329
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 48 PGEPDCLFYRRT-GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
P + D + R T + G G P A + + E+ P R G+PDC YY+K G+CK+
Sbjct: 145 PQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKF 204
Query: 107 GSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
G +C Y+HP R G P R E C YY++ GSCKFG+ C+F+HP
Sbjct: 205 GISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 259
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 185 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 244
Query: 308 YGICKFGPTCRFDHP 322
+G CKFG CRF+HP
Sbjct: 245 FGSCKFGMNCRFNHP 259
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAAQGAQY 82
A +P RPGEPDC +Y + G C +G NCRFNHP + +G
Sbjct: 227 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 286
Query: 83 REE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
E+ LP R G C YY+ G CK+G+ CK+ HP
Sbjct: 287 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 326
>gi|218198295|gb|EEC80722.1| hypothetical protein OsI_23177 [Oryza sativa Indica Group]
Length = 705
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 26/159 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEPDC +Y + G C +G +C +NHP + A + E+ P R G+PDC YY+
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYV 100
Query: 100 KTGTCKYGSTCKYHHP----------------------KDRNGAGPVSFNILGLPMRQDE 137
K G+CK+G C+++HP + ++ V N+LGLP+R
Sbjct: 101 KFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT 160
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
C YYM G CKFG CKF HP P S ++ NA+
Sbjct: 161 GLCSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNAN 199
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP---------------------KERIAQ 282
++ P RP +PDC YY+ G+CK+G +C+F+HP E ++
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 283 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
+ LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 48 PGEPDCLFYRRT-GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
P + D + R T + G G P A + + E+ P R G+PDC YY+K G+CK+
Sbjct: 2 PQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKF 61
Query: 107 GSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
G +C Y+HP R G P R E C YY++ GSCKFG+ C+F+HP
Sbjct: 62 GISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 101
Query: 308 YGICKFGPTCRFDHP 322
+G CKFG CRF+HP
Sbjct: 102 FGSCKFGMNCRFNHP 116
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAAQGAQY 82
A +P RPGEPDC +Y + G C +G NCRFNHP + +G
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 83 REE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
E+ LP R G C YY+ G CK+G+ CK+ HP
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
>gi|115468286|ref|NP_001057742.1| Os06g0520600 [Oryza sativa Japonica Group]
gi|75252736|sp|Q5Z5Q3.1|C3H43_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 43;
Short=OsC3H43
gi|54291262|dbj|BAD62014.1| translation initiation factor eIF-4F isozyme form subunit p82-like
[Oryza sativa Japonica Group]
gi|113595782|dbj|BAF19656.1| Os06g0520600 [Oryza sativa Japonica Group]
Length = 711
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/159 (37%), Positives = 83/159 (52%), Gaps = 26/159 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
+P RPGEPDC +Y + G C +G +C +NHP + A + E+ P R G+PDC YY+
Sbjct: 41 HPRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYV 100
Query: 100 KTGTCKYGSTCKYHHP----------------------KDRNGAGPVSFNILGLPMRQDE 137
K G+CK+G C+++HP + ++ V N+LGLP+R
Sbjct: 101 KFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSKVEQVKLNVLGLPLRPGT 160
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
C YYM G CKFG CKF HP P S ++ NA+
Sbjct: 161 GLCSYYMNRGICKFGTNCKFDHPDPGSDHEKWVVSSNAN 199
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 21/103 (20%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP---------------------KERIAQ 282
++ P RP +PDC YY+ G+CK+G +C+F+HP E ++
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 283 SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
+ LGLP RPG +CS Y GICKFG C+FDHP G
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHPDPG 186
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 48 PGEPDCLFYRRT-GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
P + D + R T + G G P A + + E+ P R G+PDC YY+K G+CK+
Sbjct: 2 PQDDDWFWGRPTPVVVGDGETTSKPKPPVAGKTKKVEEQHPRRPGEPDCSYYVKFGSCKF 61
Query: 107 GSTCKYHHPKDRNGAGPVSFN-ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
G +C Y+HP R G P R E C YY++ GSCKFG+ C+F+HP
Sbjct: 62 GISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHP 116
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 43/75 (57%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
P RP +PDC YY+ G+CK+G C ++HP R A P RPG+ CS Y
Sbjct: 42 PRRPGEPDCSYYVKFGSCKFGISCVYNHPDPRPQHGADDKKPAEQFPRRPGEPDCSYYVK 101
Query: 308 YGICKFGPTCRFDHP 322
+G CKFG CRF+HP
Sbjct: 102 FGSCKFGMNCRFNHP 116
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 48/100 (48%), Gaps = 25/100 (25%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------------AYAAQGAQY 82
A +P RPGEPDC +Y + G C +G NCRFNHP + +G
Sbjct: 84 AEQFPRRPGEPDCSYYVKFGSCKFGMNCRFNHPPRMPVPPQQEYFSGNACHCHHIEGKSK 143
Query: 83 REE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
E+ LP R G C YY+ G CK+G+ CK+ HP
Sbjct: 144 VEQVKLNVLGLPLRPGTGLCSYYMNRGICKFGTNCKFDHP 183
>gi|218198268|gb|EEC80695.1| hypothetical protein OsI_23121 [Oryza sativa Indica Group]
Length = 217
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 98/214 (45%), Gaps = 53/214 (24%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP---LTGNASLGSMGSSVLPSSG 189
MR +EK C YY+RTG CKF CKFHHPQPS+ A+ + S S G P +
Sbjct: 1 MRPNEKECAYYLRTGQCKFASTCKFHHPQPSNTMVAVRNSMYSPGQSATSPGQHTYPGAV 60
Query: 190 LQYA--------------------------GIVPAPGWNTYMGNIGPLSP---------- 213
+ G+V PGWN Y +G SP
Sbjct: 61 TNWTLSRSASFIASPRWPGHSGYAPVIVPQGLVQVPGWNPYAAQMGSSSPDDQQRTPVTT 120
Query: 214 ---------TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTG 263
T G + +Y S G + G + + +N+ PERPDQP+C++YM TG
Sbjct: 121 QYYGSRQSETGGMGDHGMYQSYQGGSVPVG----VYTVQGENIFPERPDQPECQFYMKTG 176
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 297
CK+GA CKFHHPKER+ + + LGLP RP
Sbjct: 177 DCKFGAVCKFHHPKERLVPAPNCALNSLGLPLRP 210
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLP 132
Y QG PER QP+C +Y+KTG CK+G+ CK+HHPK+R P + N LGLP
Sbjct: 151 VYTVQG---ENIFPERPDQPECQFYMKTGDCKFGAVCKFHHPKERLVPAPNCALNSLGLP 207
Query: 133 MR 134
+R
Sbjct: 208 LR 209
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 5/56 (8%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP 186
P R D+ C +YM+TG CKFG CKFHHP+ L N +L S+G + P
Sbjct: 160 FPERPDQPECQFYMKTGDCKFGAVCKFHHPK-----ERLVPAPNCALNSLGLPLRP 210
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P RP +P+C FY +TG C +G+ C+F+HP
Sbjct: 160 FPERPDQPECQFYMKTGDCKFGAVCKFHHP 189
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 19/27 (70%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHP 73
RP E +C +Y RTG C + S C+F+HP
Sbjct: 2 RPNEKECAYYLRTGQCKFASTCKFHHP 28
>gi|449485416|ref|XP_004157161.1| PREDICTED: zinc finger CCCH domain-containing protein ZFN-like
[Cucumis sativus]
Length = 220
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 1/108 (0%)
Query: 223 YSSRNQGDLGAGAQMHILSASSQNL-PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 281
++ R+ LG+ + + +N+ PERP QP+C++YM TG CK+GA C+FHHP+ER+
Sbjct: 53 FAIRSTDQLGSVSSSESPQQTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVL 112
Query: 282 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPIN 329
+ + P+GLP RPG+ +C YS YGICKFGP+C+FDHP + N
Sbjct: 113 PAPDCVLSPIGLPLRPGEPLCIFYSRYGICKFGPSCKFDHPMGIFTYN 160
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/82 (50%), Positives = 56/82 (68%), Gaps = 2/82 (2%)
Query: 81 QYREEL-PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEK 138
Q RE + PER GQP+C +Y+KTG CK+G+ C++HHP++R P + +GLP+R E
Sbjct: 72 QTRENVFPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPGEP 131
Query: 139 SCPYYMRTGSCKFGVACKFHHP 160
C +Y R G CKFG +CKF HP
Sbjct: 132 LCIFYSRYGICKFGPSCKFDHP 153
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C FY +TG C +G+ CRF+HP A LP R G+P C +Y
Sbjct: 78 FPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVLPAPDCVLSPIGLPLRPGEPLCIFYS 137
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CK+G +CK+ HP
Sbjct: 138 RYGICKFGPSCKFDHP 153
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 22/35 (62%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
P R + C +YM+TG CKFG C+FHHP+ L
Sbjct: 78 FPERPGQPECQFYMKTGDCKFGAVCRFHHPRERVL 112
>gi|397567414|gb|EJK45571.1| hypothetical protein THAOC_35807 [Thalassiosira oceanica]
Length = 505
Score = 118 bits (295), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 63/145 (43%), Positives = 80/145 (55%), Gaps = 26/145 (17%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR-----EEL-PERNGQPDC 95
+PYP R GEPDC Y RTG C YG +C++NHP +G + E L P R G+P C
Sbjct: 6 TPYPLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERGGGVKPANPGEPLYPVRPGEPPC 65
Query: 96 GYYLKTGTCKYGSTCKYHH----PKDRNG--AGPVSF--------------NILGLPMRQ 135
YYLK GTCK+G CK+ H P++RN AG F ++ LP R
Sbjct: 66 QYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQYVFVTSNGSSTTVAEGTSVQVLPQRP 125
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHP 160
E +C Y++R G CK+G CKFHHP
Sbjct: 126 SEPNCIYFLRNGKCKYGATCKFHHP 150
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 27/112 (24%)
Query: 33 QEGGGVAQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ------GAQY 82
+ GGGV A+P YP RPGEP C +Y + G C +G C+F+HP A + QY
Sbjct: 41 ERGGGVKPANPGEPLYPVRPGEPPCQYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQY 100
Query: 83 R-----------------EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
+ LP+R +P+C Y+L+ G CKYG+TCK+HHP D
Sbjct: 101 VFVTSNGSSTTVAEGTSVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHHPLD 152
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/84 (47%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 305
P R +PDCR Y+ TG CKYG CK++HP ER +N G P RPG+ C Y
Sbjct: 9 PLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERGGGVKPANPGEPLYPVRPGEPPCQYY 68
Query: 306 SMYGICKFGPTCRFDHPYAGYPIN 329
+G CKFG C+FDHP G P N
Sbjct: 69 LKHGTCKFGQACKFDHP-TGAPRN 91
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ 191
P+R E C Y+RTG CK+G +CK++HP G G + G + P
Sbjct: 9 PLRLGEPDCRDYLRTGRCKYGESCKYNHPLNVERG------GGVKPANPGEPLYP----- 57
Query: 192 YAGIVPA-PGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILS--------- 241
+ P P Y+ + + + + RN+ +L AG + + S
Sbjct: 58 ---VRPGEPPCQYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQYVFVTSNGSSTTVAE 114
Query: 242 -ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 280
S Q LP+RP +P+C Y++ G CKYGA CKFHHP + +
Sbjct: 115 GTSVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHHPLDAL 154
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 46/94 (48%), Gaps = 19/94 (20%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKER----------IAQSAASNIGPLG- 292
P RP +P C+YY+ GTCK+G CKF H P+ R + + +S G
Sbjct: 57 PVRPGEPPCQYYLKHGTCKFGQACKFDHPTGAPRNRNNLPAGQYVFVTSNGSSTTVAEGT 116
Query: 293 ----LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RP + C + G CK+G TC+F HP
Sbjct: 117 SVQVLPQRPSEPNCIYFLRNGKCKYGATCKFHHP 150
>gi|222635666|gb|EEE65798.1| hypothetical protein OsJ_21506 [Oryza sativa Japonica Group]
Length = 718
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + YP RPG PDC +Y G C +G C +NHPA A G + E P+R G+
Sbjct: 47 EPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCD-KLEHPQRPGEH 105
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR---------------------NGAGPVSFNILGLP 132
DC +YL+ G CKYG C+++HP DR + A V N LGLP
Sbjct: 106 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 165
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 164
+R C YYM G CKFG CKFHHP S
Sbjct: 166 LRPGTGLCSYYMNRGICKFGSNCKFHHPNSGS 197
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 287
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 99 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 158
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
+ LGLP RPG +CS Y GICKFG C+F HP +G
Sbjct: 159 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSG 196
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 30 HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------- 73
H + GG + +P RPGE DCL Y R G C YG NCRFNHP
Sbjct: 85 HPAKHAGGCDKLE-HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKAC 143
Query: 74 -AYAAQGAQYREE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ ++G E LP R G C YY+ G CK+GS CK+HHP +G
Sbjct: 144 HCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 198
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 55 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 109
Query: 305 YSMYGICKFGPTCRFDHP 322
Y +G CK+G CRF+HP
Sbjct: 110 YLRFGRCKYGMNCRFNHP 127
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 164 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 193
>gi|125555540|gb|EAZ01146.1| hypothetical protein OsI_23175 [Oryza sativa Indica Group]
Length = 628
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/152 (40%), Positives = 76/152 (50%), Gaps = 22/152 (14%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + YP RPG PDC +Y G C +G C +NHPA A G + E P+R G+
Sbjct: 47 EPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHPAKHAGGCD-KLEHPQRPGEH 105
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR---------------------NGAGPVSFNILGLP 132
DC +YL+ G CKYG C+++HP DR + A V N LGLP
Sbjct: 106 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 165
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 164
+R C YYM G CKFG CKFHHP S
Sbjct: 166 LRPGTGLCSYYMNRGICKFGSNCKFHHPNSGS 197
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 51/98 (52%), Gaps = 20/98 (20%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 287
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 99 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 158
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG 325
+ LGLP RPG +CS Y GICKFG C+F HP +G
Sbjct: 159 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSG 196
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 54/115 (46%), Gaps = 25/115 (21%)
Query: 30 HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------- 73
H + GG + +P RPGE DCL Y R G C YG NCRFNHP
Sbjct: 85 HPAKHAGGCDKLE-HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKAC 143
Query: 74 -AYAAQGAQYREE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ ++G E LP R G C YY+ G CK+GS CK+HHP +G
Sbjct: 144 HCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 198
Score = 72.0 bits (175), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 55 QEYPRRPGVPDCSYYVEFGSCKFGMGCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 109
Query: 305 YSMYGICKFGPTCRFDHP 322
Y +G CK+G CRF+HP
Sbjct: 110 YLRFGRCKYGMNCRFNHP 127
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 164 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 193
>gi|115468284|ref|NP_001057741.1| Os06g0519400 [Oryza sativa Japonica Group]
gi|122168174|sp|Q0DBW8.1|C3H42_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 42;
Short=OsC3H42
gi|113595781|dbj|BAF19655.1| Os06g0519400 [Oryza sativa Japonica Group]
Length = 279
Score = 114 bits (286), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 71/215 (33%), Positives = 97/215 (45%), Gaps = 36/215 (16%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + YP RPG PDC +Y G C +G C +NHPA A G + E P+R G+
Sbjct: 66 EPKAAVEPQEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKHAGGCD-KLEHPQRPGEH 124
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDR---------------------NGAGPVSFNILGLP 132
DC +YL+ G CKYG C+++HP DR + A V N LGLP
Sbjct: 125 DCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVKLNFLGLP 184
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHP-------------QPSSLGTALPLTGNASLGS 179
+R C YYM G CKFG CKFHHP Q + + + + + G
Sbjct: 185 LRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHEKWDGSLQTNQISSGVNIYSVLDHGE 244
Query: 180 MGSSVLPSS-GLQYAGIVPAPGWNTYMGNIGPLSP 213
+ +PS Q + + G+N Y+ L+P
Sbjct: 245 LNEQPVPSKDDFQVSFVQNIVGFNFYIWCDPELAP 279
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 34/144 (23%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA--------------------SN 287
P+RP + DC +Y+ G CKYG +C+F+HP +R+ Q
Sbjct: 118 PQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPWKACHCHHSEGKSEAEHVK 177
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGY------------PINYGLSLP 335
+ LGLP RPG +CS Y GICKFG C+F HP +G I+ G+++
Sbjct: 178 LNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSGHEKWDGSLQTNQISSGVNI- 236
Query: 336 PLSILDSSLMNHQAISATHSIETS 359
S+LD +N Q + + + S
Sbjct: 237 -YSVLDHGELNEQPVPSKDDFQVS 259
Score = 75.1 bits (183), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 55/118 (46%), Gaps = 25/118 (21%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP------------- 73
L H + GG + +P RPGE DCL Y R G C YG NCRFNHP
Sbjct: 101 LYNHPAKHAGGCDKLE-HPQRPGEHDCLHYLRFGRCKYGMNCRFNHPPDRLPQQQVYFPW 159
Query: 74 ----AYAAQGAQYREE-------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ ++G E LP R G C YY+ G CK+GS CK+HHP +G
Sbjct: 160 KACHCHHSEGKSEAEHVKLNFLGLPLRPGTGLCSYYMNRGICKFGSNCKFHHPNSGSG 217
Score = 71.2 bits (173), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
Q P RP PDC YY+ G+CK+G C ++HP + A L P RPG+ C +
Sbjct: 74 QEYPRRPGVPDCSYYVEFGSCKFGMRCLYNHPAKH-----AGGCDKLEHPQRPGEHDCLH 128
Query: 305 YSMYGICKFGPTCRFDHP 322
Y +G CK+G CRF+HP
Sbjct: 129 YLRFGRCKYGMNCRFNHP 146
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
LP RP C YYMN G CK+G++CKFHHP
Sbjct: 183 LPLRPGTGLCSYYMNRGICKFGSNCKFHHP 212
>gi|449533652|ref|XP_004173786.1| PREDICTED: zinc finger CCCH domain-containing protein 37-like,
partial [Cucumis sativus]
Length = 266
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 99/200 (49%), Gaps = 40/200 (20%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ--GAQYRE--ELPERNGQP 93
+A + P R G+PDC ++ +T C +GS C+FNHP + GA+ + LPER +P
Sbjct: 61 IANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEP 120
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKD--------------------RNGAG-------PVSF 126
C +Y+KTG CK+G CK+HHPKD AG P+S
Sbjct: 121 LCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEERAGDFKLVKPPISL 180
Query: 127 ------NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT---GNASL 177
N GLP+R E CP+Y++TGSCK+G C+++HP +++ + P S
Sbjct: 181 SPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHPDRNAINPSTPAMVHPAMVST 240
Query: 178 GSMGSSVLPSSGLQYAGIVP 197
+M + + S Y + P
Sbjct: 241 ANMNTGFVNPSNAIYQAVDP 260
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%)
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI 301
A+S++LPER PDC Y++ T CK+G+ CKF+HPK+R A LP RP + +
Sbjct: 62 ANSEDLPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPL 121
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C+ Y G CKFG C+F HP
Sbjct: 122 CAFYVKTGNCKFGINCKFHHP 142
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 60/125 (48%), Gaps = 37/125 (29%)
Query: 35 GGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQY---------- 82
G + AS P RP EP C FY +TG C +G NC+F+HP G +Y
Sbjct: 104 GAEKSDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVK 163
Query: 83 REE------------------------LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
EE LP R G+ DC +YLKTG+CKYG+TC+Y+HP DR
Sbjct: 164 TEERAGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP-DR 222
Query: 119 NGAGP 123
N P
Sbjct: 223 NAINP 227
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 32/113 (28%)
Query: 242 ASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK----------------------ER 279
+ + +LPERP +P C +Y+ TG CK+G +CKFHHPK ER
Sbjct: 108 SDASSLPERPSEPLCAFYVKTGNCKFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEER 167
Query: 280 ----------IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
I+ S A GLP RPG+ C Y G CK+G TCR++HP
Sbjct: 168 AGDFKLVKPPISLSPAIMHNSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP 220
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 20/160 (12%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 190
LP R + CPY+++T CKFG CKF+HP+ S + +SL S L + +
Sbjct: 67 LPERLGDPDCPYFLKTQRCKFGSRCKFNHPKDRSDSVGAEKSDASSLPERPSEPLCAFYV 126
Query: 191 QYAGIVPAPGWNTYM---GNIGPLSPTSIAGSN---LIYSSRNQGDLG--------AGAQ 236
+ G N +I LS S ++ + GD + A
Sbjct: 127 KTGNC--KFGINCKFHHPKDIQILSGEEYGNSEQTLMVKTEERAGDFKLVKPPISLSPAI 184
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
MH +S+ LP RP + DC +Y+ TG+CKYG C+++HP
Sbjct: 185 MH----NSKGLPIRPGEVDCPFYLKTGSCKYGTTCRYNHP 220
>gi|295913510|gb|ADG58004.1| transcription factor [Lycoris longituba]
Length = 170
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 75/136 (55%), Gaps = 18/136 (13%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQG----------AQYREELPERNGQP 93
YP RPGE DC Y T C +G C+F+HP + +G E PER G+
Sbjct: 22 YPQRPGEKDCTHYMLTRTCKFGEACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGER 81
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG--------LPMRQDEKSCPYYMR 145
DC YY+KT CK+G CK++HPKD+ A V + +G LP R E C +Y +
Sbjct: 82 DCPYYIKTQKCKFGFRCKFNHPKDKLNALTVGGDRVGAGFIDHSLLPERPSEPICVFYSK 141
Query: 146 TGSCKFGVACKFHHPQ 161
TG CKFG+ CKFHHP+
Sbjct: 142 TGKCKFGMNCKFHHPK 157
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-------AQSAASNIGPLG 292
L ++++ PERP + DC YY+ T CK+G CKF+HPK+++ + A I
Sbjct: 67 LVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHPKDKLNALTVGGDRVGAGFIDHSL 126
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RP + IC YS G CKFG C+F HP
Sbjct: 127 LPERPSEPICVFYSKTGKCKFGMNCKFHHP 156
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 64 YGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG- 122
+G+ F HP + A + P+R G+ DC +Y+ T TCK+G CK+ HP G
Sbjct: 2 FGTRSMFKHPR--LETASFPPMYPQRPGEKDCTHYMLTRTCKFGEACKFDHPIWVPEGGI 59
Query: 123 ------PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGN-A 175
P+ P R E+ CPYY++T CKFG CKF+HP+ AL + G+
Sbjct: 60 PDWKEVPLVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHPKDKL--NALTVGGDRV 117
Query: 176 SLGSMGSSVLPS 187
G + S+LP
Sbjct: 118 GAGFIDHSLLPE 129
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 58/114 (50%), Gaps = 13/114 (11%)
Query: 16 SADNIEEAIWRLK--IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
A + IW + I D +E V +P RPGE DC +Y +T C +G C+FNHP
Sbjct: 44 EACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHP 103
Query: 74 AYAAQ---------GAQYREE--LPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
GA + + LPER +P C +Y KTG CK+G CK+HHPK
Sbjct: 104 KDKLNALTVGGDRVGAGFIDHSLLPERPSEPICVFYSKTGKCKFGMNCKFHHPK 157
Score = 74.3 bits (181), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 79/186 (42%), Gaps = 18/186 (9%)
Query: 105 KYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 164
++G+ + HP+ + P + P R EK C +YM T +CKFG ACKF HP
Sbjct: 1 EFGTRSMFKHPRLETASFPPMY-----PQRPGEKDCTHYMLTRTCKFGEACKFDHP---- 51
Query: 165 LGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGW-NTYMGNIGPLSPTSIAGSNLIY 223
+P G + S + G P + T G + L
Sbjct: 52 --IWVPEGGIPDWKEVPLVPATESFPERPGERDCPYYIKTQKCKFGFRCKFNHPKDKLNA 109
Query: 224 SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 283
+ +GAG H L LPERP +P C +Y TG CK+G +CKFHHPK S
Sbjct: 110 LTVGGDRVGAGFIDHSL------LPERPSEPICVFYSKTGKCKFGMNCKFHHPKHIQIPS 163
Query: 284 AASNIG 289
+ + G
Sbjct: 164 SGQSSG 169
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHH----PKERIAQSAASNIGPL--GLPSRPGQAI 301
P+RP + DC +YM T TCK+G CKF H P+ I + P P RPG+
Sbjct: 23 PQRPGEKDCTHYMLTRTCKFGEACKFDHPIWVPEGGIPDWKEVPLVPATESFPERPGERD 82
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C Y CKFG C+F+HP
Sbjct: 83 CPYYIKTQKCKFGFRCKFNHP 103
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY 75
L + ++ G G S P RP EP C+FY +TG C +G NC+F+HP +
Sbjct: 110 LTVGGDRVGAGFIDHSLLPERPSEPICVFYSKTGKCKFGMNCKFHHPKH 158
>gi|224035765|gb|ACN36958.1| unknown [Zea mays]
gi|413916354|gb|AFW56286.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 235
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 99/211 (46%), Gaps = 31/211 (14%)
Query: 144 MRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL---QYA--- 193
MRTGSCKF CKFHHP P++ + P G+ L ++ S PS + Q A
Sbjct: 1 MRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQRALNE 60
Query: 194 --------------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
G+ P+ W+ Y + P P + + + N
Sbjct: 61 QHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNHPMYK 120
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
A S PERP QP+C++++ +G CKY C++HHP+ R + + + P+G
Sbjct: 121 AADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIG 180
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
LP +P Q +C+ Y YG CK+GP C F+HP+
Sbjct: 181 LPIKPDQPVCTYYGRYGFCKYGPACMFNHPF 211
Score = 88.2 bits (217), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 60/96 (62%), Gaps = 6/96 (6%)
Query: 71 NHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GPV 124
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 115 NHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPA 174
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+ +GLP++ D+ C YY R G CK+G AC F+HP
Sbjct: 175 GLSPIGLPIKPDQPVCTYYGRYGFCKYGPACMFNHP 210
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 41/76 (53%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP----AYAAQGAQYREELPERNGQPDCGYYL 99
YP RPG+P+C + ++G C Y CR++HP + LP + QP C YY
Sbjct: 135 YPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKPDQPVCTYYG 194
Query: 100 KTGTCKYGSTCKYHHP 115
+ G CKYG C ++HP
Sbjct: 195 RYGFCKYGPACMFNHP 210
>gi|295913574|gb|ADG58033.1| transcription factor [Lycoris longituba]
Length = 146
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 88/155 (56%), Gaps = 23/155 (14%)
Query: 169 LPLTGNASLGSMGSSVLPSSGLQ-----YAGIVPAPG---------WNTYMGNIGPLSPT 214
+PL G S + LP+ +Q I+P P W+TY G++ L T
Sbjct: 1 MPLMGGLSAWPLARPYLPNPRMQGLSAYVPVILPQPSQGAMPMQQSWSTYTGSVSQLPST 60
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
+ G I + + G G S+++ NLPERPDQP+C+YYM TG+CKYG +CK+H
Sbjct: 61 DVRGHAQIPNMKLHGHSG--------SSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYH 112
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
HPKE +S + +GPLGLP RPG AIC+ Y+MYG
Sbjct: 113 HPKESYTESPFT-LGPLGLPLRPGHAICTFYTMYG 146
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 42/69 (60%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK 138
G+ LPER QP+C YY+KTG+CKYG+ CKYHHPK+ P + LGLP+R
Sbjct: 78 GSSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPKESYTESPFTLGPLGLPLRPGHA 137
Query: 139 SCPYYMRTG 147
C +Y G
Sbjct: 138 ICTFYTMYG 146
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 125 SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 184
S + LP R D+ C YYM+TGSCK+G CK+HHP+ S T P T LG +G +
Sbjct: 79 SSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPKESY--TESPFT----LGPLGLPL 132
Query: 185 LPSSGL 190
P +
Sbjct: 133 RPGHAI 138
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR--- 83
+K+H + G + P RP +P+C +Y +TG C YG+NC+++HP + + +
Sbjct: 71 MKLHGHS---GSSTTMNLPERPDQPECQYYMKTGSCKYGTNCKYHHPKESYTESPFTLGP 127
Query: 84 EELPERNGQPDCGYYLKTG 102
LP R G C +Y G
Sbjct: 128 LGLPLRPGHAICTFYTMYG 146
>gi|295913132|gb|ADG57827.1| transcription factor [Lycoris longituba]
Length = 206
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Query: 63 GYGSNCRFNHP---AYAAQGAQYR-EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
GYG CR+NHP ++ ++ + PE QP C +LKTG C++GSTC+Y+HP+
Sbjct: 3 GYGVRCRYNHPRDRGVVSKAPRFSASDHPEHASQPVCQNFLKTGACRFGSTCRYYHPRQV 62
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP 162
G+ VS N G P+RQ EK CPYY++TG CKFG ACKFHHP+P
Sbjct: 63 GGS--VSLNYHGYPLRQGEKECPYYVKTGQCKFGSACKFHHPEP 104
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-LPERNGQPDCGYYL 99
AS +P +P C + +TG C +GS CR+ HP P R G+ +C YY+
Sbjct: 27 ASDHPEHASQPVCQNFLKTGACRFGSTCRYYHPRQVGGSVSLNYHGYPLRQGEKECPYYV 86
Query: 100 KTGTCKYGSTCKYHHPK 116
KTG CK+GS CK+HHP+
Sbjct: 87 KTGQCKFGSACKFHHPE 103
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 230 DLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
D G ++ SAS PE QP C+ ++ TG C++G+ C+++HP++ + S + N
Sbjct: 15 DRGVVSKAPRFSASDH--PEHASQPVCQNFLKTGACRFGSTCRYYHPRQ-VGGSVSLNYH 71
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
G P R G+ C Y G CKFG C+F HP
Sbjct: 72 --GYPLRQGEKECPYYVKTGQCKFGSACKFHHP 102
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 10/75 (13%)
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP---- 322
YG C+++HP++R S A P Q +C N+ G C+FG TCR+ HP
Sbjct: 4 YGVRCRYNHPRDRGVVSKAPRFSASDHPEHASQPVCQNFLKTGACRFGSTCRYYHPRQVG 63
Query: 323 ------YAGYPINYG 331
Y GYP+ G
Sbjct: 64 GSVSLNYHGYPLRQG 78
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
+S + P R + +C YY+ TG CK+G+ CKFHHP+
Sbjct: 66 VSLNYHGYPLRQGEKECPYYVKTGQCKFGSACKFHHPE 103
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 30 HDNQEGGGVA-QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
H Q GG V+ YP R GE +C +Y +TG C +GS C+F+HP
Sbjct: 58 HPRQVGGSVSLNYHGYPLRQGEKECPYYVKTGQCKFGSACKFHHP 102
>gi|357128272|ref|XP_003565798.1| PREDICTED: uncharacterized protein LOC100842536, partial
[Brachypodium distachyon]
Length = 1451
Score = 113 bits (283), Expect = 2e-22, Method: Composition-based stats.
Identities = 84/317 (26%), Positives = 126/317 (39%), Gaps = 92/317 (29%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYRE---------ELPERNGQPD 94
Y RP + +C F +R G C + S C++ H +R+ E P R G+P+
Sbjct: 1175 YSERPHKRECPFIKRFGDCKFESLCKYQHSKDRYPSRYHRKDPSQGGEVVEYPTRPGEPE 1234
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN-------ILG----------------- 130
C +Y+K CK+G+ C + HPKD N P +++ + G
Sbjct: 1235 CPFYMKNRYCKFGAHCNFDHPKDLN---PTTYSPTNEKKSVAGSDHHASTRITLKDPAPQ 1291
Query: 131 ---LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
P R + C YYM+ G CK+ AC FHHP+ LPS
Sbjct: 1292 QQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDR---------------------LPS 1330
Query: 188 SGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNL--IYSSRNQGDLGAGAQMHILSASSQ 245
GW+ P+ A S+ + N + Q + A
Sbjct: 1331 ------------GWH----------PSDPAQSDQYDTWQPTNASRIENFCQQEQIGAEIH 1368
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+PE C +YM TG C++G+ C+F H K+ + + P RPG+ CS+Y
Sbjct: 1369 GMPE------CPFYMKTGKCQFGSACEFRHLKDTRSTTEVEEHAMY--PERPGEPECSHY 1420
Query: 306 SMYGICKFGPTCRFDHP 322
+G C F C+F HP
Sbjct: 1421 MKHGYCNFQMNCKFHHP 1437
Score = 102 bits (254), Expect = 3e-19, Method: Composition-based stats.
Identities = 88/310 (28%), Positives = 113/310 (36%), Gaps = 105/310 (33%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP RPG D Y++ H Y+ ER + +C + + G
Sbjct: 1156 YPERPGRSDGPLYKQ------------EHVDYS-----------ERPHKRECPFIKRFGD 1192
Query: 104 CKYGSTCKYHHPKDRNGAGPVSFN---------ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
CK+ S CKY H KDR P ++ ++ P R E CP+YM+ CKFG
Sbjct: 1193 CKFESLCKYQHSKDRY---PSRYHRKDPSQGGEVVEYPTRPGEPECPFYMKNRYCKFGAH 1249
Query: 155 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPT 214
C F HP+ + T P
Sbjct: 1250 CNFDHPKDLNPTTYSPTN---------------------------------------EKK 1270
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
S+AGS+ S+R + + Q PERP QPDCRYYM G CKY C FH
Sbjct: 1271 SVAGSDHHASTR--------ITLKDPAPQQQQYPERPGQPDCRYYMQFGKCKYLFACIFH 1322
Query: 275 HPKERI---------AQS---------AASNIGPLGLPSRPGQAI-----CSNYSMYGIC 311
HPK+R+ AQS AS I + G I C Y G C
Sbjct: 1323 HPKDRLPSGWHPSDPAQSDQYDTWQPTNASRIENFCQQEQIGAEIHGMPECPFYMKTGKC 1382
Query: 312 KFGPTCRFDH 321
+FG C F H
Sbjct: 1383 QFGSACEFRH 1392
Score = 97.8 bits (242), Expect = 1e-17, Method: Composition-based stats.
Identities = 53/148 (35%), Positives = 71/148 (47%), Gaps = 28/148 (18%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP----------AYAAQGAQYREELP-- 87
Q YP RPG+PDC +Y + G C Y C F+HP + AQ QY P
Sbjct: 1291 QQQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPSGWHPSDPAQSDQYDTWQPTN 1350
Query: 88 ---------------ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
E +G P+C +Y+KTG C++GS C++ H KD V + + P
Sbjct: 1351 ASRIENFCQQEQIGAEIHGMPECPFYMKTGKCQFGSACEFRHLKDTRSTTEVEEHAM-YP 1409
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHP 160
R E C +YM+ G C F + CKFHHP
Sbjct: 1410 ERPGEPECSHYMKHGYCNFQMNCKFHHP 1437
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 33/78 (42%), Positives = 43/78 (55%), Gaps = 2/78 (2%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--LPERNGQPDCGYYLKTGTCKY 106
G P+C FY +TG C +GS C F H + E PER G+P+C +Y+K G C +
Sbjct: 1369 GMPECPFYMKTGKCQFGSACEFRHLKDTRSTTEVEEHAMYPERPGEPECSHYMKHGYCNF 1428
Query: 107 GSTCKYHHPKDRNGAGPV 124
CK+HHP DR PV
Sbjct: 1429 QMNCKFHHPGDRLCKKPV 1446
Score = 68.2 bits (165), Expect = 7e-09, Method: Composition-based stats.
Identities = 30/91 (32%), Positives = 51/91 (56%), Gaps = 16/91 (17%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP---------------KDRNGAGPV-SFNILG 130
P+R G+ +C Y+ G+C G +C ++HP +D +G + N +G
Sbjct: 909 PQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNRVG 968
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
LP+R+ ++C YYMR G+C++G C F+HP+
Sbjct: 969 LPIREGARNCVYYMRNGACRYGKRCHFNHPE 999
Score = 60.8 bits (146), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 19/92 (20%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQY-------------------RE 84
YP RPG+ +C Y G C G +C FNHP+ R
Sbjct: 908 YPQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNRV 967
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
LP R G +C YY++ G C+YG C ++HP+
Sbjct: 968 GLPIREGARNCVYYMRNGACRYGKRCHFNHPE 999
Score = 60.5 bits (145), Expect = 1e-06, Method: Composition-based stats.
Identities = 30/92 (32%), Positives = 43/92 (46%), Gaps = 15/92 (16%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAAS---------------NIGP 290
N P+RP + +C YM+ G+C G C F+HP + A+ S +
Sbjct: 907 NYPQRPGKLNCPSYMSKGSCSNGLSCHFNHPSVKTAKPDVSWFPSEQDNHGVAEILELNR 966
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+GLP R G C Y G C++G C F+HP
Sbjct: 967 VGLPIREGARNCVYYMRNGACRYGKRCHFNHP 998
Score = 59.3 bits (142), Expect = 4e-06, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 23/114 (20%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKE-------------RIAQSAASNIGPLGL- 293
P RP +P+C +YM CK+GA C F HPK+ +A S + L
Sbjct: 1227 PTRPGEPECPFYMKNRYCKFGAHCNFDHPKDLNPTTYSPTNEKKSVAGSDHHASTRITLK 1286
Query: 294 ---------PSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 338
P RPGQ C Y +G CK+ C F HP P + S P S
Sbjct: 1287 DPAPQQQQYPERPGQPDCRYYMQFGKCKYLFACIFHHPKDRLPSGWHPSDPAQS 1340
Score = 56.6 bits (135), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/87 (34%), Positives = 39/87 (44%), Gaps = 5/87 (5%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICS 303
ERP + +C + G CK+ + CK+ H K+R G P+RPG+ C
Sbjct: 1177 ERPHKRECPFIKRFGDCKFESLCKYQHSKDRYPSRYHRKDPSQGGEVVEYPTRPGEPECP 1236
Query: 304 NYSMYGICKFGPTCRFDHPYAGYPINY 330
Y CKFG C FDHP P Y
Sbjct: 1237 FYMKNRYCKFGAHCNFDHPKDLNPTTY 1263
Score = 47.4 bits (111), Expect = 0.014, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 29 IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
+ D + V + + YP RPGEP+C Y + G C + NC+F+HP
Sbjct: 1393 LKDTRSTTEVEEHAMYPERPGEPECSHYMKHGYCNFQMNCKFHHPG 1438
Score = 42.4 bits (98), Expect = 0.50, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 239 ILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
IL + LP R +C YYM G C+YG C F+HP+ I +S G
Sbjct: 961 ILELNRVGLPIREGARNCVYYMRNGACRYGKRCHFNHPEHVIDAHFSSPTG 1011
Score = 41.6 bits (96), Expect = 0.84, Method: Composition-based stats.
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAY 75
P R G +C++Y R G C YG C FNHP +
Sbjct: 970 PIREGARNCVYYMRNGACRYGKRCHFNHPEH 1000
>gi|62318618|dbj|BAD95055.1| zinc finger protein 2 [Arabidopsis thaliana]
Length = 120
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 70/96 (72%), Gaps = 5/96 (5%)
Query: 1 MPDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTG 60
M D + V+S+ V+ +S+D IE+A ++K+++ GV + +PYP RPGE DC FY RTG
Sbjct: 5 MSDTQHVQSSLVSIRSSDKIEDAFRKMKVNET----GVEELNPYPDRPGERDCQFYLRTG 60
Query: 61 LCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDC 95
LCGYGS+CR+NHP + Q A Y+EELPER GQPDC
Sbjct: 61 LCGYGSSCRYNHPTHLPQDVAYYKEELPERIGQPDC 96
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 6/97 (6%)
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNL---PERPDQPDCRYYMNTGTCK 266
P+S T S+L+ + A +M + + L P+RP + DC++Y+ TG C
Sbjct: 4 PMSDTQHVQSSLVSIRSSDKIEDAFRKMKVNETGVEELNPYPDRPGERDCQFYLRTGLCG 63
Query: 267 YGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 303
YG+ C+++HP + Q A LP R GQ C
Sbjct: 64 YGSSCRYNHPT-HLPQDVAYYKEE--LPERIGQPDCE 97
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 277 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
K ++ ++ + P P RPG+ C Y G+C +G +CR++HP
Sbjct: 30 KMKVNETGVEELNPY--PDRPGERDCQFYLRTGLCGYGSSCRYNHP 73
>gi|168000422|ref|XP_001752915.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696078|gb|EDQ82419.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 108 bits (270), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 56/75 (74%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
PERP QP+C+YYM TG CK+G C++HHPK+R S ++ P+GLP RPG CS Y+
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 307 MYGICKFGPTCRFDH 321
YGICKFGPTC+FDH
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/75 (54%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYM 144
PER GQP+C YY+KTG CK+G+TC+YHHPKDR P + +GLP+R C +Y
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 145 RTGSCKFGVACKFHH 159
R G CKFG CKF H
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE----LPERNGQPDCGYYL 99
+P RPG+P+C +Y +TG C +G+ CR++HP + LP R G C +Y
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPKDRTTPSPTCHLSPIGLPLRPGNLPCSFYT 63
Query: 100 KTGTCKYGSTCKYHH 114
+ G CK+G TCK+ H
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 21/31 (67%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
P R + C YYM+TG CKFG C++HHP+
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHPK 34
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 18/30 (60%)
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPGQ C Y G CKFG TCR+ HP
Sbjct: 4 FPERPGQPECQYYMKTGDCKFGTTCRYHHP 33
>gi|414876864|tpg|DAA53995.1| TPA: hypothetical protein ZEAMMB73_505725 [Zea mays]
gi|414876865|tpg|DAA53996.1| TPA: hypothetical protein ZEAMMB73_505725 [Zea mays]
Length = 220
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 73/128 (57%), Gaps = 14/128 (10%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
PERP QP+C +YM TGTCKYGA CK+HHP+ + + PLGLP RPG C+ Y+
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYA 114
Query: 307 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKI 366
+G CKFGPTC+FDHP + P SI SSL + S +P +
Sbjct: 115 HHGYCKFGPTCKFDHP---------MGTPNYSISTSSLTDVPIAPYPQSFPVTP-----M 160
Query: 367 PNWVQNSD 374
P+++ +SD
Sbjct: 161 PSYLPSSD 168
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 52/78 (66%), Gaps = 5/78 (6%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS---FNILGLPMRQDEKSCPY 142
PER GQP+C +Y+KTGTCKYG+ CKYHHP+ + GP S + LGLP+R + C Y
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFS--GPKSNCILSPLGLPLRPGSQPCAY 112
Query: 143 YMRTGSCKFGVACKFHHP 160
Y G CKFG CKF HP
Sbjct: 113 YAHHGYCKFGPTCKFDHP 130
Score = 67.8 bits (164), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYL 99
+P RPG+P+C Y +TG C YG+ C+++HP Y + LP R G C YY
Sbjct: 55 FPERPGQPECEHYMKTGTCKYGAACKYHHPQYFSGPKSNCILSPLGLPLRPGSQPCAYYA 114
Query: 100 KTGTCKYGSTCKYHHP 115
G CK+G TCK+ HP
Sbjct: 115 HHGYCKFGPTCKFDHP 130
>gi|219130045|ref|XP_002185185.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403364|gb|EEC43317.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 549
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 90/187 (48%), Gaps = 51/187 (27%)
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAG----PVSFNILGLPMRQDEKSCPYYMRTGSC 149
DC YL+TG CKYG +CKY+HP + G P+ + P+R +E C YYM+ GSC
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSC 84
Query: 150 KFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIG 209
KFG ACKF+HP P ++S Q AG P G N ++
Sbjct: 85 KFGQACKFNHP---------PQLSHSS--------------QVAGDTPVTG-NGRSTDV- 119
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 269
P+ + G ++ Q LP+RPD+PDC Y++ G CKYGA
Sbjct: 120 PVVFSQCDGPMML----------------------QFLPQRPDEPDCIYFLKNGRCKYGA 157
Query: 270 DCKFHHP 276
C++HHP
Sbjct: 158 TCRYHHP 164
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-------PERNGQPDCGYYLKTGTC 104
DC Y RTG C YG +C++NHPA G R + P R +P C YY+K G+C
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSC 84
Query: 105 KYGSTCKYHHPKD-----------------RNGAGPVSFN-------ILGLPMRQDEKSC 140
K+G CK++HP R+ PV F+ + LP R DE C
Sbjct: 85 KFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDC 144
Query: 141 PYYMRTGSCKFGVACKFHHP 160
Y+++ G CK+G C++HHP
Sbjct: 145 IYFLKNGRCKYGATCRYHHP 164
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 32/115 (27%)
Query: 33 QEGGGV-AQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR---- 83
Q GGG+ A P +P R EP C +Y + G C +G C+FNHP + +Q
Sbjct: 50 QSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTP 109
Query: 84 -----------------------EELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
+ LP+R +PDC Y+LK G CKYG+TC+YHHP
Sbjct: 110 VTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYG 309
DCR Y+ TG CKYG CK++HP QS P+ P R + +C Y +G
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPAN--VQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHG 82
Query: 310 ICKFGPTCRFDHP 322
CKFG C+F+HP
Sbjct: 83 SCKFGQACKFNHP 95
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------------- 292
P R ++P C+YYM G+CK+G CKF+HP + S + P+
Sbjct: 66 FPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQ 125
Query: 293 ---------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RP + C + G CK+G TCR+ HP
Sbjct: 126 CDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
>gi|219127658|ref|XP_002184048.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404279|gb|EEC44226.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 549
Score = 104 bits (260), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 66/187 (35%), Positives = 90/187 (48%), Gaps = 51/187 (27%)
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAG----PVSFNILGLPMRQDEKSCPYYMRTGSC 149
DC YL+TG CKYG +CKY+HP + G P+ + P+R +E C YYM+ GSC
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSC 84
Query: 150 KFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIG 209
KFG ACKF+HP P ++S Q AG P G N ++
Sbjct: 85 KFGQACKFNHP---------PQLSHSS--------------QVAGDTPVTG-NGRSTDV- 119
Query: 210 PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGA 269
P+ + G ++ Q LP+RPD+PDC Y++ G CKYGA
Sbjct: 120 PVVFSQCDGPMML----------------------QFLPQRPDEPDCIYFLKNGRCKYGA 157
Query: 270 DCKFHHP 276
C++HHP
Sbjct: 158 TCRYHHP 164
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/140 (35%), Positives = 69/140 (49%), Gaps = 31/140 (22%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-------PERNGQPDCGYYLKTGTC 104
DC Y RTG C YG +C++NHPA G R + P R +P C YY+K G+C
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPANVQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSC 84
Query: 105 KYGSTCKYHHPKD-----------------RNGAGPVSFN-------ILGLPMRQDEKSC 140
K+G CK++HP R+ PV F+ + LP R DE C
Sbjct: 85 KFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDC 144
Query: 141 PYYMRTGSCKFGVACKFHHP 160
Y+++ G CK+G C++HHP
Sbjct: 145 IYFLKNGRCKYGATCRYHHP 164
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 55/115 (47%), Gaps = 32/115 (27%)
Query: 33 QEGGGV-AQASP----YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR---- 83
Q GGG+ A P +P R EP C +Y + G C +G C+FNHP + +Q
Sbjct: 50 QSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTP 109
Query: 84 -----------------------EELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
+ LP+R +PDC Y+LK G CKYG+TC+YHHP
Sbjct: 110 VTGNGRSTDVPVVFSQCDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-----LPSRPGQAICSNYSMYG 309
DCR Y+ TG CKYG CK++HP QS P+ P R + +C Y +G
Sbjct: 25 DCRDYLRTGRCKYGPSCKYNHPAN--VQSGGGMRAPIDPSEPLFPVRLNEPLCQYYMKHG 82
Query: 310 ICKFGPTCRFDHP 322
CKFG C+F+HP
Sbjct: 83 SCKFGQACKFNHP 95
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 23/99 (23%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG-------------- 292
P R ++P C+YYM G+CK+G CKF+HP + S + P+
Sbjct: 66 FPVRLNEPLCQYYMKHGSCKFGQACKFNHPPQLSHSSQVAGDTPVTGNGRSTDVPVVFSQ 125
Query: 293 ---------LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RP + C + G CK+G TCR+ HP
Sbjct: 126 CDGPMMLQFLPQRPDEPDCIYFLKNGRCKYGATCRYHHP 164
>gi|223973265|gb|ACN30820.1| unknown [Zea mays]
gi|413950619|gb|AFW83268.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 170
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 75/146 (51%), Gaps = 29/146 (19%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS------------------FNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + ++ N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQ 161
E C +YM+TGSCK+G C+F+HP
Sbjct: 136 GEVDCSFYMKTGSCKYGSICRFNHPD 161
Score = 88.6 bits (218), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 90/206 (43%), Gaps = 61/206 (29%)
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN---GAGPVSFNILG---- 130
+ + PER G+PDC Y L CK+ S CK++HPKD G G + +++
Sbjct: 9 KAPNVEDSYPERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAV 67
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGL 190
LP+R E C +Y +TG CKFG CKF+HP+ + +S L
Sbjct: 68 LPVRPSEPICVFYAKTGKCKFGAICKFNHPK-----------------DIKTSPL----- 105
Query: 191 QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 250
IA + ++ + D A +++ LP R
Sbjct: 106 -------------------------IAKETIYTATTDAADAPTEA------CNAKGLPIR 134
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHP 276
+ DC +YM TG+CKYG+ C+F+HP
Sbjct: 135 QGEVDCSFYMKTGSCKYGSICRFNHP 160
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 22/106 (20%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
A + LP R G+ DC +Y+KTG+CKYGS C+++HP DR G G
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHP-DRPGPG 166
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 52/109 (47%), Gaps = 17/109 (15%)
Query: 231 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 278
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 279 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
A + GLP R G+ CS Y G CK+G CRF+HP
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTGSCKYGSICRFNHP 160
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 301
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
>gi|168000222|ref|XP_001752815.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695978|gb|EDQ82319.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 78
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 55/75 (73%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
PER QP+C+YYM TG CK+G C++HHPK+R S+ ++ +GLP RPG CS Y+
Sbjct: 4 FPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMGLPLRPGNPPCSFYT 63
Query: 307 MYGICKFGPTCRFDH 321
YGICKFGPTC+FDH
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYM 144
PER GQP+C YY+KTG CK+G+TC+YHHPKDR+ + + +GLP+R C +Y
Sbjct: 4 FPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMGLPLRPGNPPCSFYT 63
Query: 145 RTGSCKFGVACKFHH 159
R G CKFG CKF H
Sbjct: 64 RYGICKFGPTCKFDH 78
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 16/83 (19%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPA----------YAAQGAQYREELPERNG 91
S +P R G+P+C +Y +TG C +G+ CR++HP +A G LP R G
Sbjct: 2 SLFPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSSTCHLSAMG------LPLRPG 55
Query: 92 QPDCGYYLKTGTCKYGSTCKYHH 114
P C +Y + G CK+G TCK+ H
Sbjct: 56 NPPCSFYTRYGICKFGPTCKFDH 78
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 5/56 (8%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLP 186
P R + C YYM+TG CKFG C++HHP+ S ++ L +MG + P
Sbjct: 4 FPERLGQPECQYYMKTGECKFGTTCRYHHPKDRSTPSS-----TCHLSAMGLPLRP 54
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 19/33 (57%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 275
S+ LP RP P C +Y G CK+G CKF H
Sbjct: 46 SAMGLPLRPGNPPCSFYTRYGICKFGPTCKFDH 78
>gi|295913268|gb|ADG57891.1| transcription factor [Lycoris longituba]
Length = 73
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/70 (64%), Positives = 51/70 (72%), Gaps = 1/70 (1%)
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFG 152
+C YYLK G C +G TCK+HHP D+ G AG V NILG P+R EK C YY+RTG CKFG
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKAGIAGRVQLNILGYPLRPSEKECAYYLRTGQCKFG 63
Query: 153 VACKFHHPQP 162
CKFHHPQP
Sbjct: 64 STCKFHHPQP 73
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%)
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 314
+C+YY+ G C +G CKFHHP ++ + + LG P RP + C+ Y G CKFG
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKAGIAGRVQLNILGYPLRPSEKECAYYLRTGQCKFG 63
Query: 315 PTCRFDHP 322
TC+F HP
Sbjct: 64 STCKFHHP 71
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 6/70 (8%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-----PERNGQPDCGYYLKTGTCKY 106
+C +Y + G+C +G C+F+HP A G R +L P R + +C YYL+TG CK+
Sbjct: 4 ECQYYLKMGICXFGPTCKFHHPVDKA-GIAGRVQLNILGYPLRPSEKECAYYLRTGQCKF 62
Query: 107 GSTCKYHHPK 116
GSTCK+HHP+
Sbjct: 63 GSTCKFHHPQ 72
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 227 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
++ + Q++IL P RP + +C YY+ TG CK+G+ CKFHHP+
Sbjct: 27 DKAGIAGRVQLNIL-----GYPLRPSEKECAYYLRTGQCKFGSTCKFHHPQ 72
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RP E +C +Y RTG C +GS C+F+HP
Sbjct: 42 YPLRPSEKECAYYLRTGQCKFGSTCKFHHP 71
>gi|222618134|gb|EEE54266.1| hypothetical protein OsJ_01160 [Oryza sativa Japonica Group]
Length = 182
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 62/104 (59%), Gaps = 17/104 (16%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
P RP QP+C+YY+ TG+CK+G+ CK+HHP+ + + PLGLP RPG C+ Y+
Sbjct: 12 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 71
Query: 307 MYGICKFGPTCRFDHPY-----------------AGYPINYGLS 333
+G CKFGPTC+FDHP A YP+NY ++
Sbjct: 72 QHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPIAPYPLNYAVA 115
Score = 88.2 bits (217), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/77 (53%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYM 144
P R GQP+C YYLKTG+CK+GS CKYHHP+ N + LGLP+R + C YY
Sbjct: 12 FPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPCAYYT 71
Query: 145 RTGSCKFGVACKFHHPQ 161
+ G CKFG CKF HP
Sbjct: 72 QHGFCKFGPTCKFDHPM 88
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 54/98 (55%), Gaps = 4/98 (4%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDC 95
Q +PARPG+P+C +Y +TG C +GS C+++HP Y + LP R G C
Sbjct: 8 QEPAFPARPGQPECQYYLKTGSCKFGSACKYHHPQYLNTPKSNCMLSPLGLPLRPGSQPC 67
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
YY + G CK+G TCK+ HP P + +I LP+
Sbjct: 68 AYYTQHGFCKFGPTCKFDHPMGTLSYSPSASSITDLPI 105
>gi|295913205|gb|ADG57861.1| transcription factor [Lycoris longituba]
Length = 165
Score = 97.8 bits (242), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 51/78 (65%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
Q PERP QP+C+Y+M TG CK+G CK+HHP E + GLP RPG C
Sbjct: 40 QTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQPCIF 99
Query: 305 YSMYGICKFGPTCRFDHP 322
Y+ +G+CKFGPTC+FDHP
Sbjct: 100 YAQHGVCKFGPTCKFDHP 117
Score = 85.5 bits (210), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD-RNGAGPVSFNILGLPMRQDEKS 139
Q + PER GQP+C Y+++TG CK+G TCKYHHP + R + GLP+R +
Sbjct: 37 QQEQTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQP 96
Query: 140 CPYYMRTGSCKFGVACKFHHP 160
C +Y + G CKFG CKF HP
Sbjct: 97 CIFYAQHGVCKFGPTCKFDHP 117
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDC 95
Q +P RPG+P+C ++ RTG C +G C+++HP LP R G C
Sbjct: 38 QEQTFPERPGQPECQYFMRTGDCKFGPTCKYHHPPEWRTPRTDCVLSSAGLPLRPGVQPC 97
Query: 96 GYYLKTGTCKYGSTCKYHHP 115
+Y + G CK+G TCK+ HP
Sbjct: 98 IFYAQHGVCKFGPTCKFDHP 117
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 19/34 (55%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
SS LP RP C +Y G CK+G CKF HP
Sbjct: 84 SSAGLPLRPGVQPCIFYAQHGVCKFGPTCKFDHP 117
>gi|217074532|gb|ACJ85626.1| unknown [Medicago truncatula]
Length = 162
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP--- 73
A ++ E++W L + GGG A YP R G P+C +Y RTG CGYG CRFNHP
Sbjct: 25 AADLGESMWHLSL---GSGGG---AESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDR 78
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
A A + + PER G+P C YYLKTGTCK+G++CK+HHP
Sbjct: 79 AAVAAAVRATGDYPERLGEPPCQYYLKTGTCKFGASCKFHHP 120
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 49/77 (63%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYY 143
E PER+G P+C YY++TG C YG C+++HP+DR P R E C YY
Sbjct: 44 ESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRATGDYPERLGEPPCQYY 103
Query: 144 MRTGSCKFGVACKFHHP 160
++TG+CKFG +CKFHHP
Sbjct: 104 LKTGTCKFGASCKFHHP 120
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 234 GAQMHILSASS----QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIG 289
G M LS S ++ PER P+C YYM TG C YG C+F+HP++R A +AA
Sbjct: 29 GESMWHLSLGSGGGAESYPERHGVPNCAYYMRTGFCGYGGRCRFNHPRDRAAVAAAVRAT 88
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLP 335
P R G+ C Y G CKFG +C+F HP + +G P
Sbjct: 89 G-DYPERLGEPPCQYYLKTGTCKFGASCKFHHPISWMESLFGSCKP 133
Score = 37.7 bits (86), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
P R +C YYMRTG C +G C+F+HP+
Sbjct: 47 PERHGVPNCAYYMRTGFCGYGGRCRFNHPR 76
>gi|295913146|gb|ADG57833.1| transcription factor [Lycoris longituba]
Length = 148
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 34/160 (21%)
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS-MGSSVL 185
N GLP+R E CP+Y++TGSCK+G C+++HP+ +S+ N LG+ +G +++
Sbjct: 15 NSKGLPIRPGETDCPFYLKTGSCKYGATCRYNHPERTSI--------NPPLGANIGQTIM 66
Query: 186 PSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQ 245
PS AG+V P N + ++ PL Q LG M+
Sbjct: 67 PSGTSLPAGLV-NPAAN-LIPSLDPL--------------LAQASLGVCPTMY------- 103
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAA 285
P+RP QP+C +YM TG C +G CKFHHP +R A A+
Sbjct: 104 --PQRPGQPECDFYMKTGRCNFGERCKFHHPVDRSAPKAS 141
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 53/118 (44%), Gaps = 42/118 (35%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA----QGAQYREEL-------------- 86
P RPGE DC FY +TG C YG+ CR+NHP + GA + +
Sbjct: 20 PIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTSLPAGLVNP 79
Query: 87 ------------------------PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
P+R GQP+C +Y+KTG C +G CK+HHP DR+
Sbjct: 80 AANLIPSLDPLLAQASLGVCPTMYPQRPGQPECDFYMKTGRCNFGERCKFHHPVDRSA 137
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 54/114 (47%), Gaps = 39/114 (34%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI----------------- 128
LP R G+ DC +YLKTG+CKYG+TC+Y+HP+ + P+ NI
Sbjct: 19 LPIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTSLPAGLVN 78
Query: 129 -----------------LGL-----PMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
LG+ P R + C +YM+TG C FG CKFHHP
Sbjct: 79 PAANLIPSLDPLLAQASLGVCPTMYPQRPGQPECDFYMKTGRCNFGERCKFHHP 132
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 53/121 (43%), Gaps = 38/121 (31%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP-KERIAQSAASNIG--------- 289
L +S+ LP RP + DC +Y+ TG+CKYGA C+++HP + I +NIG
Sbjct: 12 LLHNSKGLPIRPGETDCPFYLKTGSCKYGATCRYNHPERTSINPPLGANIGQTIMPSGTS 71
Query: 290 -PLGL---------------------------PSRPGQAICSNYSMYGICKFGPTCRFDH 321
P GL P RPGQ C Y G C FG C+F H
Sbjct: 72 LPAGLVNPAANLIPSLDPLLAQASLGVCPTMYPQRPGQPECDFYMKTGRCNFGERCKFHH 131
Query: 322 P 322
P
Sbjct: 132 P 132
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 23/31 (74%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
YP RPG+P+C FY +TG C +G C+F+HP
Sbjct: 103 YPQRPGQPECDFYMKTGRCNFGERCKFHHPV 133
>gi|47499870|gb|AAT28673.1| zinc finger protein [Oryza sativa Japonica Group]
gi|47559177|gb|AAT35591.1| zinc-finger transcription factor [Oryza sativa Japonica Group]
Length = 207
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
PERP QPDC+YYM TG CK+GA CK+HHP+E A + + L LP RPG C+ Y+
Sbjct: 35 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 94
Query: 307 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL 340
G C++G C++DHP + Y S PLS +
Sbjct: 95 QNGYCRYGVACKYDHPMGT--LGYSPSALPLSDM 126
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG-AGPVSFNILGLPMRQDEKS 139
Q PER GQPDC YY++TG CK+G+TCKYHHP++ + N L LP+R +
Sbjct: 30 QQEHGFPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQP 89
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLG---TALPLT 172
C YY + G C++GVACK+ HP +LG +ALPL+
Sbjct: 90 CAYYAQNGYCRYGVACKYDHPM-GTLGYSPSALPLS 124
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP-AYAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+PDC +Y RTG C +G+ C+++HP +A + Y LP R G C YY
Sbjct: 35 FPERPGQPDCQYYMRTGDCKFGATCKYHHPRELSAPKSGYMVNSLCLPLRPGAQPCAYYA 94
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G P + + +P+
Sbjct: 95 QNGYCRYGVACKYDHPMGTLGYSPSALPLSDMPI 128
>gi|42571795|ref|NP_973988.1| zinc finger CCCH domain-containing protein 13 [Arabidopsis
thaliana]
gi|122215429|sp|Q3ECU8.1|C3H13_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 13;
Short=AtC3H13
gi|332194141|gb|AEE32262.1| zinc finger CCCH domain-containing protein 13 [Arabidopsis
thaliana]
Length = 82
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 51/79 (64%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 302
S + PERP +P+C YY+ TG C +CK+HHPK + GLP RPGQAIC
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAIC 61
Query: 303 SNYSMYGICKFGPTCRFDH 321
+YS +GIC+ GPTC+FDH
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPY 142
E+ PER G+P+C YYL+TG C CKYHHPK+ + P + N GLP+R + CP+
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPH 63
Query: 143 YMRTGSCKFGVACKFHH 159
Y R G C+ G CKF H
Sbjct: 64 YSRFGICRSGPTCKFDH 80
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA----QGAQYREELPERNGQPDCGYYL 99
+P RPGEP+C +Y RTG C NC+++HP Q + LP R GQ C +Y
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAICPHYS 65
Query: 100 KTGTCKYGSTCKYHH 114
+ G C+ G TCK+ H
Sbjct: 66 RFGICRSGPTCKFDH 80
>gi|219363609|ref|NP_001136594.1| uncharacterized protein LOC100216717 [Zea mays]
gi|194696306|gb|ACF82237.1| unknown [Zea mays]
gi|413950616|gb|AFW83265.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 165
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 71/152 (46%), Gaps = 32/152 (21%)
Query: 58 RTGLCGYGSNCRFNHP---------AYAAQGAQ------------YREEL----PERNGQ 92
+TG C YGS CRFNHP A+ Q E L P+R G+
Sbjct: 2 KTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPGE 61
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDR-------NGAGPVSFNILGLPMRQDEKSCPYYMR 145
C +Y+KTG+CKY CK+HHP R NG + LP R+D ++C +YMR
Sbjct: 62 TVCDFYMKTGSCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMR 121
Query: 146 TGSCKFGVACKFHHPQPSSLGTALPLTGNASL 177
+G C+FG CKF HP + L G +
Sbjct: 122 SGMCRFGAHCKFDHPPREEAISELQAAGKEGI 153
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 75/185 (40%), Gaps = 55/185 (29%)
Query: 144 MRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNT 203
M+TGSCK+G C+F+HP P A + + + LPSS
Sbjct: 1 MKTGSCKYGSICRFNHPDRPG-----PAADIAFMVPLVQATLPSSA-------------- 41
Query: 204 YMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTG 263
P+ P + +IY P+RP + C +YM TG
Sbjct: 42 ------PIVPAVVEPLPMIY------------------------PQRPGETVCDFYMKTG 71
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGP------LGLPSRPGQAICSNYSMYGICKFGPTC 317
+CKY CKFHHP R A + N P LP R C+ Y G+C+FG C
Sbjct: 72 SCKYSQKCKFHHPISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHC 131
Query: 318 RFDHP 322
+FDHP
Sbjct: 132 KFDHP 136
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 14/84 (16%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE------------LPERNG 91
YP RPGE C FY +TG C Y C+F+HP ++ A + +E LP R
Sbjct: 55 YPQRPGETVCDFYMKTGSCKYSQKCKFHHP--ISRFAPHSKENGDPQQPATLASLPRRED 112
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y+++G C++G+ CK+ HP
Sbjct: 113 AEACAFYMRSGMCRFGAHCKFDHP 136
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 22/84 (26%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNI----------------------LGLPMRQD 136
+KTG+CKYGS C+++HP A ++F + + P R
Sbjct: 1 MKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPG 60
Query: 137 EKSCPYYMRTGSCKFGVACKFHHP 160
E C +YM+TGSCK+ CKFHHP
Sbjct: 61 ETVCDFYMKTGSCKYSQKCKFHHP 84
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 21/88 (23%)
Query: 260 MNTGTCKYGADCKFHHPKER-----------IAQS----------AASNIGPLGLPSRPG 298
M TG+CKYG+ C+F+HP + Q+ A P+ P RPG
Sbjct: 1 MKTGSCKYGSICRFNHPDRPGPAADIAFMVPLVQATLPSSAPIVPAVVEPLPMIYPQRPG 60
Query: 299 QAICSNYSMYGICKFGPTCRFDHPYAGY 326
+ +C Y G CK+ C+F HP + +
Sbjct: 61 ETVCDFYMKTGSCKYSQKCKFHHPISRF 88
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 24 IWRLKIHDNQEGG--GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
I R H + G A + P R C FY R+G+C +G++C+F+HP
Sbjct: 85 ISRFAPHSKENGDPQQPATLASLPRREDAEACAFYMRSGMCRFGAHCKFDHP 136
>gi|297847070|ref|XP_002891416.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297337258|gb|EFH67675.1| zinc finger (CCCH-type) family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 82
Score = 91.3 bits (225), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 51/79 (64%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 302
S N PERP +P+C YY+ TG C +CK+HHPK + + GLP RP QAIC
Sbjct: 2 SDGNFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPREPPCPLNDKGLPLRPDQAIC 61
Query: 303 SNYSMYGICKFGPTCRFDH 321
+YS +GICK GPTC+FDH
Sbjct: 62 PHYSRFGICKSGPTCKFDH 80
Score = 79.0 bits (193), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN-GAGPVSFNILGLPMRQDEKSCPYYM 144
PER G+P+C YYL+TG C CKYHHPK+ P N GLP+R D+ CP+Y
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPREPPCPLNDKGLPLRPDQAICPHYS 65
Query: 145 RTGSCKFGVACKFHH 159
R G CK G CKF H
Sbjct: 66 RFGICKSGPTCKFDH 80
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 42/79 (53%), Gaps = 12/79 (15%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE--------LPERNGQPDC 95
+P RPGEP+C +Y RTG C NC+++HP + RE LP R Q C
Sbjct: 6 FPERPGEPECSYYLRTGNCYLKQNCKYHHP----KNITPREPPCPLNDKGLPLRPDQAIC 61
Query: 96 GYYLKTGTCKYGSTCKYHH 114
+Y + G CK G TCK+ H
Sbjct: 62 PHYSRFGICKSGPTCKFDH 80
>gi|194705310|gb|ACF86739.1| unknown [Zea mays]
Length = 235
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 63/91 (69%), Gaps = 5/91 (5%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP-VSFNILGLPMRQDEKSCPYYM 144
PER GQP+C YY++TG CK+G+TCKY+HP+D + + F+ L LP+R + C YY
Sbjct: 68 FPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYA 127
Query: 145 RTGSCKFGVACKFHHPQPSSLG---TALPLT 172
+ G C++G+ACK+ HP +LG +ALPL+
Sbjct: 128 QNGYCRYGIACKYDHPM-GTLGYSSSALPLS 157
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/167 (35%), Positives = 80/167 (47%), Gaps = 33/167 (19%)
Query: 195 IVPAPGWNTYMGNI--------------GPL-------SPTSIA--GSNLIYSSRNQGDL 231
+VP GW+ Y + GPL S T+IA G+ L YSS + G
Sbjct: 1 MVPLQGWSPYPAPVNHVASGGAQQTIQAGPLYGIGHHGSSTAIAYGGTYLPYSS-STGQS 59
Query: 232 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 291
Q H PERP QP+C+YYM TG CK+G CK++HP++ + L
Sbjct: 60 SNNHQEH-------GFPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHL 112
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS 338
LP RPG C+ Y+ G C++G C++DHP + Y S PLS
Sbjct: 113 CLPLRPGAQPCTYYAQNGYCRYGIACKYDHPMGT--LGYSSSALPLS 157
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE---LPERNGQPDCGYYL 99
+P RPG+P+C +Y RTG C +G+ C++NHP ++ + Y LP R G C YY
Sbjct: 68 FPERPGQPECQYYMRTGDCKFGTTCKYNHPQDWSTSKSNYMFSHLCLPLRPGAQPCTYYA 127
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ G C+YG CKY HP G + + +P+
Sbjct: 128 QNGYCRYGIACKYDHPMGTLGYSSSALPLSDMPI 161
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 22/32 (68%)
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
G P R + C YYMRTG CKFG CK++HPQ
Sbjct: 67 GFPERPGQPECQYYMRTGDCKFGTTCKYNHPQ 98
>gi|414881849|tpg|DAA58980.1| TPA: hypothetical protein ZEAMMB73_531605 [Zea mays]
Length = 94
Score = 89.0 bits (219), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 9/83 (10%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG---------AGPVSFNILGLPMRQDE 137
P+R G+ C +Y+KTG+CKY CK+HHP DR+ PV+ + GLP R+D
Sbjct: 6 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 65
Query: 138 KSCPYYMRTGSCKFGVACKFHHP 160
++C +YMR+G+C FG CKF HP
Sbjct: 66 EACAFYMRSGTCGFGARCKFDHP 88
Score = 71.6 bits (174), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 45/83 (54%), Gaps = 8/83 (9%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN--------IGPLGLPSRPGQ 299
P+RP + C +YM TG+CKY +CKFHHP +R A + N + GLP R
Sbjct: 6 PQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRREDA 65
Query: 300 AICSNYSMYGICKFGPTCRFDHP 322
C+ Y G C FG C+FDHP
Sbjct: 66 EACAFYMRSGTCGFGARCKFDHP 88
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 12/84 (14%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA-YAAQGAQYREE-----------LPERNG 91
YP RPGE C FY +TG C Y NC+F+HP +A ++ E+ LP R
Sbjct: 5 YPQRPGEIVCDFYMKTGSCKYAQNCKFHHPFDRSAPHSKENEDTQQPVALTLAGLPRRED 64
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHP 115
C +Y+++GTC +G+ CK+ HP
Sbjct: 65 AEACAFYMRSGTCGFGARCKFDHP 88
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
++ + LP R D C +YM +GTC +GA CKF HP
Sbjct: 52 VALTLAGLPRREDAEACAFYMRSGTCGFGARCKFDHP 88
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
P+ P RPG+ +C Y G CK+ C+F HP+
Sbjct: 2 PMIYPQRPGEIVCDFYMKTGSCKYAQNCKFHHPF 35
>gi|384250119|gb|EIE23599.1| hypothetical protein COCSUDRAFT_15464 [Coccomyxa subellipsoidea
C-169]
Length = 500
Score = 87.8 bits (216), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 49/77 (63%), Gaps = 4/77 (5%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
P R GQP C +Y KTG CK+G CK+ HP V N LGLP+RQ E C ++ +
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFG----VQLNSLGLPLRQGESVCGHFEK 479
Query: 146 TGSCKFGVACKFHHPQP 162
T +CKFG ACKFHHP+P
Sbjct: 480 THTCKFGPACKFHHPEP 496
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 52/79 (65%), Gaps = 3/79 (3%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-LPERNGQPDCGYYLKTG 102
+P RPG+P C FY +TG C +G C+F+HPA+ G Q LP R G+ CG++ KT
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHF--GVQLNSLGLPLRQGESVCGHFEKTH 481
Query: 103 TCKYGSTCKYHHPKDRNGA 121
TCK+G CK+HHP+ +GA
Sbjct: 482 TCKFGPACKFHHPEPLHGA 500
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 5/77 (6%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
+ P RP QP C +Y TG CK+G CKF HP Q + LGLP R G+++C ++
Sbjct: 423 SFPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFGVQ-----LNSLGLPLRQGESVCGHF 477
Query: 306 SMYGICKFGPTCRFDHP 322
CKFGP C+F HP
Sbjct: 478 EKTHTCKFGPACKFHHP 494
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLP 335
P RPGQ +C Y+ G CKFG C+FDHP + G +N L LP
Sbjct: 424 FPCRPGQPLCDFYTKTGHCKFGEACKFDHPAHFGVQLN-SLGLP 466
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 240 LSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
+ +S LP R + C ++ T TCK+G CKFHHP+
Sbjct: 458 VQLNSLGLPLRQGESVCGHFEKTHTCKFGPACKFHHPE 495
>gi|413950621|gb|AFW83270.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 167
Score = 84.3 bits (207), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 64/133 (48%), Gaps = 29/133 (21%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV------------------SFNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + + + N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTGS 148
E C +YM+T +
Sbjct: 136 GEVDCSFYMKTAA 148
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%), Gaps = 8/82 (9%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN---GAGPVSFNILG----LPMRQDEKS 139
PER G+PDC Y L CK+ S CK++HPKD G G + +++ LP+R E
Sbjct: 18 PERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 140 CPYYMRTGSCKFGVACKFHHPQ 161
C +Y +TG CKFG CKF+HP+
Sbjct: 77 CVFYAKTGKCKFGAICKFNHPK 98
Score = 71.2 bits (173), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 301
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 41/92 (44%), Gaps = 17/92 (18%)
Query: 231 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 278
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 279 -----RIAQSAASNIGPLGLPSRPGQAICSNY 305
A + GLP R G+ CS Y
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFY 143
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 8/135 (5%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSG 189
P R E CPY + CKF CKF+HP+ ++LGT T N SL + S+VLP
Sbjct: 18 PERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTG---TNNESLIA-DSAVLPVRP 72
Query: 190 LQYAGIVPAPGWNTYMGNIGPLS-PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLP 248
+ + A G I + P I S LI A + +++ LP
Sbjct: 73 SEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLP 132
Query: 249 ERPDQPDCRYYMNTG 263
R + DC +YM T
Sbjct: 133 IRQGEVDCSFYMKTA 147
>gi|413950618|gb|AFW83267.1| hypothetical protein ZEAMMB73_943527 [Zea mays]
Length = 156
Score = 84.0 bits (206), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 64/132 (48%), Gaps = 29/132 (21%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA--YAAQGAQYREE--------LPERNGQP 93
YP RPGEPDC Y C + S C+FNHP A G E LP R +P
Sbjct: 17 YPERPGEPDCP-YLLNNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEP 75
Query: 94 DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV------------------SFNILGLPMRQ 135
C +Y KTG CK+G+ CK++HPKD + + + N GLP+RQ
Sbjct: 76 ICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADAPTEACNAKGLPIRQ 135
Query: 136 DEKSCPYYMRTG 147
E C +YM+TG
Sbjct: 136 GEVDCSFYMKTG 147
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN---GAGPVSFNILG----LPMRQ 135
+ PER G+PDC Y L CK+ S CK++HPKD G G + +++ LP+R
Sbjct: 14 EDSYPERPGEPDCPYLL-NNRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRP 72
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQ 161
E C +Y +TG CKFG CKF+HP+
Sbjct: 73 SEPICVFYAKTGKCKFGAICKFNHPK 98
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 7/81 (8%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERI-AQSAASNIGPL-----GLPSRPGQAI 301
PERP +PDC Y +N CK+ + CKF+HPK+ + A +N L LP RP + I
Sbjct: 18 PERPGEPDCPYLLN-NRCKFKSKCKFNHPKDMVNALGTGTNNESLIADSAVLPVRPSEPI 76
Query: 302 CSNYSMYGICKFGPTCRFDHP 322
C Y+ G CKFG C+F+HP
Sbjct: 77 CVFYAKTGKCKFGAICKFNHP 97
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 21/86 (24%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---------------------AYA 76
+A ++ P RP EP C+FY +TG C +G+ C+FNHP A A
Sbjct: 62 IADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETIYTATTDAADA 121
Query: 77 AQGAQYREELPERNGQPDCGYYLKTG 102
A + LP R G+ DC +Y+KTG
Sbjct: 122 PTEACNAKGLPIRQGEVDCSFYMKTG 147
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 42/96 (43%), Gaps = 17/96 (17%)
Query: 231 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE------------ 278
LG G L A S LP RP +P C +Y TG CK+GA CKF+HPK+
Sbjct: 52 LGTGTNNESLIADSAVLPVRPSEPICVFYAKTGKCKFGAICKFNHPKDIKTSPLIAKETI 111
Query: 279 -----RIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
A + GLP R G+ CS Y G
Sbjct: 112 YTATTDAADAPTEACNAKGLPIRQGEVDCSFYMKTG 147
>gi|297845874|ref|XP_002890818.1| hypothetical protein ARALYDRAFT_890484 [Arabidopsis lyrata subsp.
lyrata]
gi|297336660|gb|EFH67077.1| hypothetical protein ARALYDRAFT_890484 [Arabidopsis lyrata subsp.
lyrata]
Length = 269
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+ Q+SPYP RPG +C Y +TGLC +GS+CR+NHP Q R P C Y
Sbjct: 58 MTQSSPYPVRPGVENCQCYIKTGLCRFGSSCRYNHPNQRPQV---------RIDAPICKY 108
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPV 124
+LK G+CK+GS C + H DRN A P+
Sbjct: 109 FLK-GSCKFGSACIFQHIMDRNVAEPM 134
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 13/73 (17%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
P R G +C Y+KTG C++GS+C+Y+HP R +R D C Y+++
Sbjct: 65 PVRPGVENCQCYIKTGLCRFGSSCRYNHPNQRP------------QVRIDAPICKYFLK- 111
Query: 147 GSCKFGVACKFHH 159
GSCKFG AC F H
Sbjct: 112 GSCKFGSACIFQH 124
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 14/74 (18%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
P RP +C+ Y+ TG C++G+ C+++HP +R P A Y +
Sbjct: 65 PVRPGVENCQCYIKTGLCRFGSSCRYNHPNQR--------------PQVRIDAPICKYFL 110
Query: 308 YGICKFGPTCRFDH 321
G CKFG C F H
Sbjct: 111 KGSCKFGSACIFQH 124
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 277 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
KER+ QS+ P RPG C Y G+C+FG +CR++HP
Sbjct: 55 KERMTQSSP-------YPVRPGVENCQCYIKTGLCRFGSSCRYNHP 93
>gi|302853185|ref|XP_002958109.1| hypothetical protein VOLCADRAFT_107956 [Volvox carteri f.
nagariensis]
gi|300256577|gb|EFJ40840.1| hypothetical protein VOLCADRAFT_107956 [Volvox carteri f.
nagariensis]
Length = 1304
Score = 80.5 bits (197), Expect = 1e-12, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK 138
GA E P R G+ C +Y+KTG CK+G +C + HP+ V LGLP+R +E+
Sbjct: 1176 GAVMVREFPRRPGKQLCDFYVKTGHCKFGESCVFDHPE----LYAVRLTALGLPLRPEEQ 1231
Query: 139 SCPYYMRTGSCKFGVACKFHHP 160
C +Y++ C+FG ACKFHHP
Sbjct: 1232 ICTFYLKNNECRFGPACKFHHP 1253
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/78 (41%), Positives = 43/78 (55%), Gaps = 5/78 (6%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ P RP + C +Y+ TG CK+G C F HP + A + LGLP RP + IC+
Sbjct: 1181 REFPRRPGKQLCDFYVKTGHCKFGESCVFDHP-----ELYAVRLTALGLPLRPEEQICTF 1235
Query: 305 YSMYGICKFGPTCRFDHP 322
Y C+FGP C+F HP
Sbjct: 1236 YLKNNECRFGPACKFHHP 1253
Score = 43.1 bits (100), Expect = 0.28, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 27/44 (61%)
Query: 236 QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
+++ + ++ LP RP++ C +Y+ C++G CKFHHP R
Sbjct: 1213 ELYAVRLTALGLPLRPEEQICTFYLKNNECRFGPACKFHHPPLR 1256
>gi|307103601|gb|EFN51860.1| hypothetical protein CHLNCDRAFT_27455, partial [Chlorella
variabilis]
Length = 71
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 47/76 (61%), Gaps = 5/76 (6%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
P+RP QP C +Y TG C++G CK+HHP E A + P GLP RPGQ +C+ Y
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAE-----FAVRLNPRGLPVRPGQPVCTFYQ 55
Query: 307 MYGICKFGPTCRFDHP 322
G CKFGP C++ HP
Sbjct: 56 KTGECKFGPACKYHHP 71
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
P+R GQP C +Y KTG C++G CKYHHP + V N GLP+R + C +Y +
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAEF----AVRLNPRGLPVRPGQPVCTFYQK 56
Query: 146 TGSCKFGVACKFHHP 160
TG CKFG ACK+HHP
Sbjct: 57 TGECKFGPACKYHHP 71
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/72 (52%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
+P RPG+P C FY++TG C +G C+++HPA A R LP R GQP C +Y KTG
Sbjct: 1 FPQRPGQPVCDFYQKTGHCRFGELCKYHHPAEFAVRLNPRG-LPVRPGQPVCTFYQKTGE 59
Query: 104 CKYGSTCKYHHP 115
CK+G CKYHHP
Sbjct: 60 CKFGPACKYHHP 71
Score = 44.7 bits (104), Expect = 0.087, Method: Composition-based stats.
Identities = 18/32 (56%), Positives = 22/32 (68%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+ LP RP QP C +Y TG CK+G CK+HHP
Sbjct: 40 RGLPVRPGQPVCTFYQKTGECKFGPACKYHHP 71
>gi|297735284|emb|CBI17646.3| unnamed protein product [Vitis vinifera]
Length = 111
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP---AYAA 77
++A+W++ + ++ ++ PYP RPGEPDC +Y RTGLC +G CRFNHP A
Sbjct: 26 QDAMWQMNLRSSE----TMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAI 81
Query: 78 QGAQYREELPERNGQPDC 95
A+ + E PER GQP+C
Sbjct: 82 ATARMKGEFPERMGQPEC 99
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 233 AGAQMHILSASSQN---LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER-IAQSAASNI 288
A QM++ S+ + PERP +PDC YY+ TG C++G C+F+HP R +A + A
Sbjct: 28 AMWQMNLRSSETMESGPYPERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMK 87
Query: 289 GPLGLPSRPGQAICSNYSMYGI 310
G P R GQ C ++ I
Sbjct: 88 G--EFPERMGQPECQACVLFFI 107
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
PER G+PDC YY++TG C++G TC+++HP +R A + P R + C
Sbjct: 46 PERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIATARMKGEFPERMGQPEC 99
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 23/37 (62%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 168
P R E C YY+RTG C+FG+ C+F+HP L A
Sbjct: 46 PERPGEPDCSYYIRTGLCRFGITCRFNHPPNRKLAIA 82
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG+ CS Y G+C+FG TCRF+HP
Sbjct: 46 PERPGEPDCSYYIRTGLCRFGITCRFNHP 74
>gi|413916353|gb|AFW56285.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 287
Score = 78.2 bits (191), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 81/185 (43%), Gaps = 31/185 (16%)
Query: 144 MRTGSCKFGVACKFHHPQPSSLGTALP----LTGNASLGSMGSSVLPSSGL---QYA--- 193
MRTGSCKF CKFHHP P++ + P G+ L ++ S PS + Q A
Sbjct: 1 MRTGSCKFATNCKFHHPDPTNASSKEPGLEHENGDVPLQNVQGSSQPSLQMWPDQRALNE 60
Query: 194 --------------------GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
G+ P+ W+ Y + P P + + + N
Sbjct: 61 QHVPFLAPAPSYSGGMVPPQGMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNHPMYK 120
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
A S PERP QP+C++++ +G CKY C++HHP+ R + + + P+G
Sbjct: 121 AADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIG 180
Query: 293 LPSRP 297
LP +P
Sbjct: 181 LPIKP 185
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 114 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 173
Query: 124 VSFNILGLPMR 134
+ +GLP++
Sbjct: 174 AGLSPIGLPIK 184
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C Y CR++HP
Sbjct: 135 YPERPGQPECQHFVKSGFCKYRMKCRYHHP 164
>gi|309257037|gb|ADO62646.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 77.8 bits (190), Expect = 8e-12, Method: Composition-based stats.
Identities = 36/64 (56%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YMRTG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y++TG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMRTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMRTGKCKFGLTCKFH 64
Score = 40.4 bits (93), Expect = 1.6, Method: Composition-based stats.
Identities = 15/27 (55%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY RTG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMRTGKCKFGLTCKFH 64
>gi|302832796|ref|XP_002947962.1| hypothetical protein VOLCADRAFT_103744 [Volvox carteri f.
nagariensis]
gi|300266764|gb|EFJ50950.1| hypothetical protein VOLCADRAFT_103744 [Volvox carteri f.
nagariensis]
Length = 315
Score = 77.8 bits (190), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++++TGTC YG CK+ HP DR P N G P+R DE C +Y++ G C FG
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDRP---PPQLNTRGYPIRADEPDCAHYLKKGWCAFGPT 180
Query: 155 CKFHHP--QPSSL---GTALPLTGNASL 177
CKF+HP QPS L G + P T SL
Sbjct: 181 CKFNHPEMQPSILNSYGLSQPPTAYVSL 208
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 6/88 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +++ TGTC YG CKF HP +R + G P R + C++Y G C FGP
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDR----PPPQLNTRGYPIRADEPDCAHYLKKGWCAFGP 179
Query: 316 TCRFDHPYAGYPI--NYGLSLPPLSILD 341
TC+F+HP I +YGLS PP + +
Sbjct: 180 TCKFNHPEMQPSILNSYGLSQPPTAYVS 207
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 36/64 (56%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+ RTG C YG C+F HP P R +PDC +YLK G C +G TCK+
Sbjct: 124 CTFFIRTGTCAYGDRCKFKHPLDRPPPQLNTRGYPIRADEPDCAHYLKKGWCAFGPTCKF 183
Query: 113 HHPK 116
+HP+
Sbjct: 184 NHPE 187
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP R EPDC Y + G C +G C+FNHP
Sbjct: 157 YPIRADEPDCAHYLKKGWCAFGPTCKFNHP 186
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
++ P R D+PDC +Y+ G C +G CKF+HP+
Sbjct: 154 TRGYPIRADEPDCAHYLKKGWCAFGPTCKFNHPE 187
>gi|159486531|ref|XP_001701292.1| key regulator in ER unfolded protein response [Chlamydomonas
reinhardtii]
gi|158271775|gb|EDO97587.1| key regulator in ER unfolded protein response [Chlamydomonas
reinhardtii]
Length = 1573
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYY 143
E P R G+ C +Y+KTG CK+ TC + HP + V LGLP+R E C +Y
Sbjct: 1478 REFPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHA----VRLTALGLPLRPAEPVCTFY 1533
Query: 144 MRTGSCKFGVACKFHHPQ 161
++ C FG ACKF+HP
Sbjct: 1534 LKNNECGFGPACKFNHPM 1551
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
+ P RP + C +Y+ TG CK+ C F HP E + A LGLP RP + +C+
Sbjct: 1478 REFPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHAVRLTA-----LGLPLRPAEPVCTF 1532
Query: 305 YSMYGICKFGPTCRFDHP 322
Y C FGP C+F+HP
Sbjct: 1533 YLKNNECGFGPACKFNHP 1550
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
+P RPG+ C FY +TG C + C F+HP A LP R +P C +YLK
Sbjct: 1480 FPRRPGKQLCDFYVKTGHCKFADTCVFDHPVEHAVRLTAL-GLPLRPAEPVCTFYLKNNE 1538
Query: 104 CKYGSTCKYHHPKDR 118
C +G CK++HP R
Sbjct: 1539 CGFGPACKFNHPMLR 1553
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
H + ++ LP RP +P C +Y+ C +G CKF+HP R
Sbjct: 1512 HAVRLTALGLPLRPAEPVCTFYLKNNECGFGPACKFNHPMLR 1553
>gi|309256993|gb|ADO62624.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 77.0 bits (188), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 70.5 bits (171), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 64.3 bits (155), Expect = 9e-08, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENDGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 49.7 bits (117), Expect = 0.003, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS + LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENDGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.3 bits (90), Expect = 3.6, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|309256901|gb|ADO62578.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256903|gb|ADO62579.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256905|gb|ADO62580.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256907|gb|ADO62581.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256909|gb|ADO62582.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256911|gb|ADO62583.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256913|gb|ADO62584.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256915|gb|ADO62585.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256917|gb|ADO62586.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256919|gb|ADO62587.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256925|gb|ADO62590.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256927|gb|ADO62591.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256929|gb|ADO62592.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256931|gb|ADO62593.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256933|gb|ADO62594.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256935|gb|ADO62595.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256937|gb|ADO62596.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256939|gb|ADO62597.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256941|gb|ADO62598.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256943|gb|ADO62599.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256945|gb|ADO62600.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256947|gb|ADO62601.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256949|gb|ADO62602.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256951|gb|ADO62603.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256953|gb|ADO62604.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256955|gb|ADO62605.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256957|gb|ADO62606.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256959|gb|ADO62607.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256961|gb|ADO62608.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256963|gb|ADO62609.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256965|gb|ADO62610.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256967|gb|ADO62611.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256969|gb|ADO62612.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256971|gb|ADO62613.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256973|gb|ADO62614.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256975|gb|ADO62615.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256977|gb|ADO62616.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256979|gb|ADO62617.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256981|gb|ADO62618.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256983|gb|ADO62619.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256985|gb|ADO62620.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256987|gb|ADO62621.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256995|gb|ADO62625.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256997|gb|ADO62626.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309256999|gb|ADO62627.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257001|gb|ADO62628.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257003|gb|ADO62629.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257005|gb|ADO62630.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257007|gb|ADO62631.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257009|gb|ADO62632.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257011|gb|ADO62633.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257013|gb|ADO62634.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257015|gb|ADO62635.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257017|gb|ADO62636.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257019|gb|ADO62637.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257021|gb|ADO62638.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257023|gb|ADO62639.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257025|gb|ADO62640.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257029|gb|ADO62642.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257033|gb|ADO62644.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257039|gb|ADO62647.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257041|gb|ADO62648.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257043|gb|ADO62649.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257045|gb|ADO62650.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257047|gb|ADO62651.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257049|gb|ADO62652.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257051|gb|ADO62653.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257053|gb|ADO62654.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257055|gb|ADO62655.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257057|gb|ADO62656.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257059|gb|ADO62657.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257061|gb|ADO62658.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257063|gb|ADO62659.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257069|gb|ADO62662.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257073|gb|ADO62664.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257075|gb|ADO62665.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257077|gb|ADO62666.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257079|gb|ADO62667.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257081|gb|ADO62668.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257083|gb|ADO62669.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257085|gb|ADO62670.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257087|gb|ADO62671.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257089|gb|ADO62672.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257091|gb|ADO62673.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257097|gb|ADO62676.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257101|gb|ADO62678.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257103|gb|ADO62679.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257109|gb|ADO62682.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257113|gb|ADO62684.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257115|gb|ADO62685.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257125|gb|ADO62690.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257127|gb|ADO62691.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257129|gb|ADO62692.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257131|gb|ADO62693.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257133|gb|ADO62694.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257135|gb|ADO62695.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257137|gb|ADO62696.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257139|gb|ADO62697.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257141|gb|ADO62698.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257143|gb|ADO62699.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257145|gb|ADO62700.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257147|gb|ADO62701.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257149|gb|ADO62702.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257151|gb|ADO62703.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257153|gb|ADO62704.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257157|gb|ADO62706.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257159|gb|ADO62707.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257161|gb|ADO62708.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257163|gb|ADO62709.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|328693109|gb|AEB38166.1| HUA1 [Helianthus exilis]
Length = 64
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 70.1 bits (170), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 64.3 bits (155), Expect = 1e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.3 bits (90), Expect = 4.1, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693111|gb|AEB38167.1| HUA1 [Helianthus exilis]
Length = 64
Score = 76.6 bits (187), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQSAAS-NIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA AS N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 63.9 bits (154), Expect = 2e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLFASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LPERP +P C +YM TG CK+G CKFH
Sbjct: 37 LPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.7 bits (91), Expect = 3.0, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693057|gb|AEB38140.1| HUA1 [Helianthus petiolaris]
gi|328693059|gb|AEB38141.1| HUA1 [Helianthus petiolaris]
Length = 64
Score = 75.9 bits (185), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
++LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 69.3 bits (168), Expect = 3e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
+++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
F+ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 51.6 bits (122), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 64
Score = 39.3 bits (90), Expect = 3.3, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 38 PERPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|328693113|gb|AEB38168.1| HUA1 [Helianthus tuberosus]
gi|328693115|gb|AEB38169.1| HUA1 [Helianthus tuberosus]
gi|328693117|gb|AEB38170.1| HUA1 [Helianthus tuberosus]
gi|328693119|gb|AEB38171.1| HUA1 [Helianthus tuberosus]
gi|328693121|gb|AEB38172.1| HUA1 [Helianthus tuberosus]
gi|328693123|gb|AEB38173.1| HUA1 [Helianthus tuberosus]
gi|328693125|gb|AEB38174.1| HUA1 [Helianthus tuberosus]
gi|328693127|gb|AEB38175.1| HUA1 [Helianthus tuberosus]
gi|328693131|gb|AEB38177.1| HUA1 [Helianthus tuberosus]
gi|328693133|gb|AEB38178.1| HUA1 [Helianthus tuberosus]
gi|328693135|gb|AEB38179.1| HUA1 [Helianthus tuberosus]
gi|328693137|gb|AEB38180.1| HUA1 [Helianthus tuberosus]
gi|328693139|gb|AEB38181.1| HUA1 [Helianthus tuberosus]
gi|328693141|gb|AEB38182.1| HUA1 [Helianthus tuberosus]
gi|328693143|gb|AEB38183.1| HUA1 [Helianthus tuberosus]
gi|328693145|gb|AEB38184.1| HUA1 [Helianthus tuberosus]
gi|328693147|gb|AEB38185.1| HUA1 [Helianthus tuberosus]
gi|328693149|gb|AEB38186.1| HUA1 [Helianthus tuberosus]
gi|328693151|gb|AEB38187.1| HUA1 [Helianthus tuberosus]
gi|328693153|gb|AEB38188.1| HUA1 [Helianthus tuberosus]
gi|328693157|gb|AEB38190.1| HUA1 [Helianthus tuberosus]
gi|328693159|gb|AEB38191.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT +CK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CKFH
Sbjct: 62 CKFH 65
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T +CK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
C+F
Sbjct: 62 CKF 64
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLSCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
E GV + P RP EP C FY +TG C +G C+F+
Sbjct: 31 ENNGVLEL---PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693071|gb|AEB38147.1| HUA1 [Helianthus paradoxus]
gi|328693073|gb|AEB38148.1| HUA1 [Helianthus paradoxus]
gi|328693077|gb|AEB38150.1| HUA1 [Helianthus paradoxus]
Length = 65
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R + C +YM+TG CKFG+
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CKFH
Sbjct: 62 CKFH 65
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
C+F
Sbjct: 62 CKF 64
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSDPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSDPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
E GV + P RP +P C FY +TG C +G C+F+
Sbjct: 31 ENNGVLEL---PERPSDPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693041|gb|AEB38132.1| HUA1 [Helianthus petiolaris]
gi|328693045|gb|AEB38134.1| HUA1 [Helianthus petiolaris]
gi|328693065|gb|AEB38144.1| HUA1 [Helianthus paradoxus]
gi|328693067|gb|AEB38145.1| HUA1 [Helianthus paradoxus]
gi|328693069|gb|AEB38146.1| HUA1 [Helianthus paradoxus]
gi|328693075|gb|AEB38149.1| HUA1 [Helianthus paradoxus]
gi|328693079|gb|AEB38151.1| HUA1 [Helianthus paradoxus]
gi|328693085|gb|AEB38154.1| HUA1 [Helianthus paradoxus]
gi|328693087|gb|AEB38155.1| HUA1 [Helianthus paradoxus]
gi|328693089|gb|AEB38156.1| HUA1 [Helianthus exilis]
gi|328693091|gb|AEB38157.1| HUA1 [Helianthus exilis]
gi|328693093|gb|AEB38158.1| HUA1 [Helianthus exilis]
gi|328693095|gb|AEB38159.1| HUA1 [Helianthus exilis]
gi|328693101|gb|AEB38162.1| HUA1 [Helianthus exilis]
gi|328693103|gb|AEB38163.1| HUA1 [Helianthus exilis]
gi|328693105|gb|AEB38164.1| HUA1 [Helianthus exilis]
gi|328693107|gb|AEB38165.1| HUA1 [Helianthus exilis]
Length = 65
Score = 75.5 bits (184), Expect = 5e-11, Method: Composition-based stats.
Identities = 35/64 (54%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CKFH
Sbjct: 62 CKFH 65
Score = 68.9 bits (167), Expect = 4e-09, Method: Composition-based stats.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
C+F
Sbjct: 62 CKF 64
Score = 63.2 bits (152), Expect = 3e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 50.4 bits (119), Expect = 0.002, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.5 bits (88), Expect = 6.2, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 39 PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693049|gb|AEB38136.1| HUA1 [Helianthus petiolaris]
gi|328693051|gb|AEB38137.1| HUA1 [Helianthus petiolaris]
gi|328693053|gb|AEB38138.1| HUA1 [Helianthus petiolaris]
gi|328693055|gb|AEB38139.1| HUA1 [Helianthus petiolaris]
gi|328693061|gb|AEB38142.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 74.7 bits (182), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
++LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CKFH
Sbjct: 62 CKFH 65
Score = 68.2 bits (165), Expect = 7e-09, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
+++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
C+F
Sbjct: 62 CKF 64
Score = 64.7 bits (156), Expect = 7e-08, Method: Composition-based stats.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
F+ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 FFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.9 bits (89), Expect = 4.9, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 18/27 (66%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFN 71
P RP EP C FY +TG C +G C+F+
Sbjct: 39 PERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693063|gb|AEB38143.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CK H
Sbjct: 62 CKSH 65
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CR 318
C+
Sbjct: 62 CK 63
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK H
Sbjct: 62 CKSH 65
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CK H
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKSH 65
>gi|309257027|gb|ADO62641.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM+TG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 26/64 (40%), Positives = 36/64 (56%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREE-----LPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E LPE +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPE P +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLVLPESPSEPRCAFYMKTGKCKFGLTCKFH 64
>gi|309257031|gb|ADO62643.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 64
Score = 73.6 bits (179), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM+TG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTGKCKFGLT 60
Query: 155 CKFH 158
CKFH
Sbjct: 61 CKFH 64
Score = 67.0 bits (162), Expect = 1e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTGKCKFGLT 60
Query: 317 CRF 319
C+F
Sbjct: 61 CKF 63
Score = 61.2 bits (147), Expect = 9e-07, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPE +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMKTGKCKFGLT 60
Query: 110 CKYH 113
CK+H
Sbjct: 61 CKFH 64
Score = 48.1 bits (113), Expect = 0.007, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPE P +P C +YM TG CK+G CKFH
Sbjct: 26 LSASENNGVLELPESPSEPQCAFYMKTGKCKFGLTCKFH 64
>gi|449015918|dbj|BAM79320.1| unknown zinc-finger protein [Cyanidioschyzon merolae strain 10D]
Length = 688
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 46/72 (63%), Gaps = 7/72 (9%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
YP R G PDCL Y +TG C +G+ C+FNHP + A+ + L R DC ++ TG+
Sbjct: 240 YPCREGAPDCLHYLKTGRCQFGARCKFNHP---PRDARLIDSLNRR----DCFDWVMTGS 292
Query: 104 CKYGSTCKYHHP 115
C YGS+CKY+HP
Sbjct: 293 CPYGSSCKYNHP 304
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 45/74 (60%), Gaps = 10/74 (13%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
P R G PDC +YLKTG C++G+ CK++HP P ++ R+D C ++ T
Sbjct: 241 PCREGAPDCLHYLKTGRCQFGARCKFNHP-------PRDARLIDSLNRRD---CFDWVMT 290
Query: 147 GSCKFGVACKFHHP 160
GSC +G +CK++HP
Sbjct: 291 GSCPYGSSCKYNHP 304
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 229 GDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE--RIAQSAAS 286
G L AGA L++ P R PDC +Y+ TG C++GA CKF+HP R+ S
Sbjct: 222 GMLSAGANTAQLTSRPGVYPCREGAPDCLHYLKTGRCQFGARCKFNHPPRDARLIDSL-- 279
Query: 287 NIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+ C ++ M G C +G +C+++HP
Sbjct: 280 -----------NRRDCFDWVMTGSCPYGSSCKYNHP 304
>gi|328693129|gb|AEB38176.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CK H
Sbjct: 62 CKLH 65
Score = 67.0 bits (162), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
C+
Sbjct: 62 CKL 64
Score = 61.6 bits (148), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK H
Sbjct: 62 CKLH 65
Score = 48.1 bits (113), Expect = 0.008, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CK H
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTCKLH 65
>gi|452825226|gb|EME32224.1| tetratricopeptide repeat (TPR)-containing protein [Galdieria
sulphuraria]
Length = 736
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYY 98
A+ YP R PDC++Y +TG C YGS C+FNHP E L + + DC +
Sbjct: 336 AEYITYPVRLNSPDCMYYLKTGKCNYGSRCKFNHPPRD-------ERLIKALSRRDCFDF 388
Query: 99 LKTGTCKYGSTCKYHHP 115
L+ G C YG +CKY+HP
Sbjct: 389 LQFGRCPYGKSCKYNHP 405
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 44/79 (55%), Gaps = 10/79 (12%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
P R PDC YYLKTG C YGS CK++HP P ++ R+D C +++
Sbjct: 342 PVRLNSPDCMYYLKTGKCNYGSRCKFNHP-------PRDERLIKALSRRD---CFDFLQF 391
Query: 147 GSCKFGVACKFHHPQPSSL 165
G C +G +CK++HP + L
Sbjct: 392 GRCPYGKSCKYNHPSKAEL 410
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 15/77 (19%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGPLGLPSRPGQAICSNY 305
P R + PDC YY+ TG C YG+ CKF+HP ER+ + L R C ++
Sbjct: 342 PVRLNSPDCMYYLKTGKCNYGSRCKFNHPPRDERLIK---------ALSRRD----CFDF 388
Query: 306 SMYGICKFGPTCRFDHP 322
+G C +G +C+++HP
Sbjct: 389 LQFGRCPYGKSCKYNHP 405
>gi|297845880|ref|XP_002890821.1| hypothetical protein ARALYDRAFT_313613 [Arabidopsis lyrata subsp.
lyrata]
gi|297336663|gb|EFH67080.1| hypothetical protein ARALYDRAFT_313613 [Arabidopsis lyrata subsp.
lyrata]
Length = 295
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 67/133 (50%), Gaps = 25/133 (18%)
Query: 6 QVKSNAVANQSADNIEEAIWR-------------LKIHDNQEGGGVAQASPYPARPGEPD 52
Q SN + + E +W+ + + + +G S YP RPGE +
Sbjct: 76 QRVSNVEMQRRSHETESRLWQRARTPDSRGSGSTMMLEERTQGRSEPVLSAYPIRPGEEN 135
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG-QPDCGYYLKTGTCKYGSTCK 111
C FY + LCG+GS+C +NHP E+P R G + DC ++ K G+CK GS C+
Sbjct: 136 CPFYLKNHLCGWGSDCCYNHPPL--------HEIPYRIGNKLDCKFF-KAGSCKRGSNCQ 186
Query: 112 YHHPKDRNGAGPV 124
++HP+D GA P+
Sbjct: 187 FYHPRD--GAEPM 197
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 25/128 (19%)
Query: 217 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+GS ++ R QG +LSA P RP + +C +Y+ C +G+DC ++HP
Sbjct: 106 SGSTMMLEERTQGRSEP-----VLSA----YPIRPGEENCPFYLKNHLCGWGSDCCYNHP 156
Query: 277 KERIAQSAASNIGPL-GLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAG-YPINYGLSL 334
PL +P R G + + G CK G C+F HP G P+ G +
Sbjct: 157 -------------PLHEIPYRIGNKLDCKFFKAGSCKRGSNCQFYHPRDGAEPMRQGRT- 202
Query: 335 PPLSILDS 342
P L DS
Sbjct: 203 PDLRRNDS 210
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 15/94 (15%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
P R G+ +C +YLK C +GS C Y+HP + +P R K + +
Sbjct: 128 PIRPGEENCPFYLKNHLCGWGSDCCYNHPP-----------LHEIPYRIGNKLDCKFFKA 176
Query: 147 GSCKFGVACKFHHP----QPSSLGTALPLTGNAS 176
GSCK G C+F+HP +P G L N S
Sbjct: 177 GSCKRGSNCQFYHPRDGAEPMRQGRTPDLRRNDS 210
>gi|328693155|gb|AEB38189.1| HUA1 [Helianthus tuberosus]
Length = 65
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+ KT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+ G CKFG+
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAGKCKFGLT 61
Query: 155 CKFH 158
CKFH
Sbjct: 62 CKFH 65
Score = 68.2 bits (165), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y+ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAGKCKFGLT 61
Query: 317 CRF 319
C+F
Sbjct: 62 CKF 64
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+K G CK+G T
Sbjct: 2 YFPKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKAGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM G CK+G CKFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKAGKCKFGLTCKFH 65
>gi|328693047|gb|AEB38135.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/64 (51%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT CK+GS CK++HPKD+ + S N + LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
CKFH
Sbjct: 62 CKFH 65
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T CK+G+ CKF+HPK++IA SA+ N G LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
C+F
Sbjct: 62 CKF 64
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLACKFGSKCKFNHPKDKIASLSASENNGVPELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
CK+H
Sbjct: 62 CKFH 65
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G CKFH
Sbjct: 27 LSASENNGVPELPERPSEPQCAFYMKTGKCKFGLTCKFH 65
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFN 71
E GV + P RP EP C FY +TG C +G C+F+
Sbjct: 31 ENNGVPE---LPERPSEPQCAFYMKTGKCKFGLTCKFH 65
>gi|328693043|gb|AEB38133.1| HUA1 [Helianthus petiolaris]
Length = 65
Score = 71.6 bits (174), Expect = 7e-10, Method: Composition-based stats.
Identities = 34/64 (53%), Positives = 44/64 (68%), Gaps = 2/64 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 155 CKFH 158
KFH
Sbjct: 62 SKFH 65
Score = 65.5 bits (158), Expect = 5e-08, Method: Composition-based stats.
Identities = 32/63 (50%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 317 CRF 319
+F
Sbjct: 62 SKF 64
Score = 59.3 bits (142), Expect = 3e-06, Method: Composition-based stats.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 5/64 (7%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Query: 110 CKYH 113
K+H
Sbjct: 62 SKFH 65
Score = 46.6 bits (109), Expect = 0.024, Method: Composition-based stats.
Identities = 22/39 (56%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADCKFH 274
LSAS N LPERP +P C +YM TG CK+G KFH
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTSKFH 65
>gi|334182942|ref|NP_174253.2| putative zinc finger CCCH domain-containing protein 10 [Arabidopsis
thaliana]
gi|380865369|sp|Q9C7P1.2|C3H10_ARATH RecName: Full=Putative zinc finger CCCH domain-containing protein
10; Short=AtC3H10
gi|332192988|gb|AEE31109.1| putative zinc finger CCCH domain-containing protein 10 [Arabidopsis
thaliana]
Length = 389
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP-DCGYYL 99
+S YP RPGE +CLFY + LC +GS C +NHP +E+P R G+ DC
Sbjct: 125 SSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPL--------QEIPCRIGKKLDC---- 172
Query: 100 KTGTCKYGSTCKYHHPKDRNG 120
K G CK GS C ++HPK+R+G
Sbjct: 173 KAGACKRGSNCPFNHPKERDG 193
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 17/86 (19%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK-SCPYYMR 145
P R G+ +C +Y+K C++GS C Y+HP + +P R +K C +
Sbjct: 129 PVRPGEDNCLFYMKNHLCEWGSECCYNHPP-----------LQEIPCRIGKKLDC----K 173
Query: 146 TGSCKFGVACKFHHPQPSSLGTALPL 171
G+CK G C F+HP+ G +LP+
Sbjct: 174 AGACKRGSNCPFNHPKERD-GDSLPM 198
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 33/117 (28%)
Query: 219 SNLIYSSRNQGDLGAGAQMH-----------ILSASSQNLPERPDQPDCRYYMNTGTCKY 267
S L +R Q G+ ++M +LS++ P RP + +C +YM C++
Sbjct: 92 SRLWQRARTQDRRGSESRMMFDGRTQWSHAPVLSSA---YPVRPGEDNCLFYMKNHLCEW 148
Query: 268 GADCKFHHPKERIAQSAASNIGPL-GLPSRPGQAI-CSNYSMYGICKFGPTCRFDHP 322
G++C ++HP PL +P R G+ + C G CK G C F+HP
Sbjct: 149 GSECCYNHP-------------PLQEIPCRIGKKLDCK----AGACKRGSNCPFNHP 188
>gi|12323533|gb|AAG51745.1|AC068667_24 zinc finger protein, putative; 86473-88078 [Arabidopsis thaliana]
Length = 287
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 13/81 (16%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP-DCGYYL 99
+S YP RPGE +CLFY + LC +GS C +NHP +E+P R G+ DC
Sbjct: 125 SSAYPVRPGEDNCLFYMKNHLCEWGSECCYNHPPL--------QEIPCRIGKKLDC---- 172
Query: 100 KTGTCKYGSTCKYHHPKDRNG 120
K G CK GS C ++HPK+R+G
Sbjct: 173 KAGACKRGSNCPFNHPKERDG 193
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 44/86 (51%), Gaps = 17/86 (19%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK-SCPYYMR 145
P R G+ +C +Y+K C++GS C Y+HP + +P R +K C +
Sbjct: 129 PVRPGEDNCLFYMKNHLCEWGSECCYNHPP-----------LQEIPCRIGKKLDC----K 173
Query: 146 TGSCKFGVACKFHHPQPSSLGTALPL 171
G+CK G C F+HP+ G +LP+
Sbjct: 174 AGACKRGSNCPFNHPKERD-GDSLPM 198
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 33/117 (28%)
Query: 219 SNLIYSSRNQGDLGAGAQMH-----------ILSASSQNLPERPDQPDCRYYMNTGTCKY 267
S L +R Q G+ ++M +LS++ P RP + +C +YM C++
Sbjct: 92 SRLWQRARTQDRRGSESRMMFDGRTQWSHAPVLSSA---YPVRPGEDNCLFYMKNHLCEW 148
Query: 268 GADCKFHHPKERIAQSAASNIGPL-GLPSRPGQAI-CSNYSMYGICKFGPTCRFDHP 322
G++C ++HP PL +P R G+ + C G CK G C F+HP
Sbjct: 149 GSECCYNHP-------------PLQEIPCRIGKKLDCK----AGACKRGSNCPFNHP 188
>gi|309257093|gb|ADO62674.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257095|gb|ADO62675.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 61
Score = 69.3 bits (168), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVA 154
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 155 C 155
C
Sbjct: 61 C 61
Score = 66.6 bits (161), Expect = 2e-08, Method: Composition-based stats.
Identities = 32/61 (52%), Positives = 42/61 (68%), Gaps = 1/61 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 317 C 317
C
Sbjct: 61 C 61
Score = 58.2 bits (139), Expect = 9e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 60
Query: 110 C 110
C
Sbjct: 61 C 61
Score = 43.9 bits (102), Expect = 0.15, Method: Composition-based stats.
Identities = 20/36 (55%), Positives = 23/36 (63%), Gaps = 4/36 (11%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYGADC 271
LSAS N LPERP +P C +YM TG CK+G C
Sbjct: 26 LSASENNGVLELPERPSEPQCAFYMKTGKCKFGLTC 61
>gi|452819110|gb|EME26200.1| putative zinc-finger protein [Galdieria sulphuraria]
Length = 494
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 7/89 (7%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
N E + + YP R PDC++Y +TG C YG+ C++NHP + L +
Sbjct: 184 NSEDNQLNSSYKYPIRRSRPDCIYYLKTGKCSYGTKCKYNHPPRD-------QTLVKALS 236
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
+ +C +L+ G C YG CKY HP ++G
Sbjct: 237 RRECFDFLQFGRCPYGKKCKYSHPNRQHG 265
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 12/75 (16%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
P R +PDC YYLKTG C YG+ CKY+HP +D+ +S + C +++
Sbjct: 197 PIRRSRPDCIYYLKTGKCSYGTKCKYNHPPRDQTLVKALS-----------RRECFDFLQ 245
Query: 146 TGSCKFGVACKFHHP 160
G C +G CK+ HP
Sbjct: 246 FGRCPYGKKCKYSHP 260
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 49/105 (46%), Gaps = 25/105 (23%)
Query: 219 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-PK 277
SNL+ S NQ + SS P R +PDC YY+ TG C YG CK++H P+
Sbjct: 180 SNLVNSEDNQLN------------SSYKYPIRRSRPDCIYYLKTGKCSYGTKCKYNHPPR 227
Query: 278 ERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++ A S + C ++ +G C +G C++ HP
Sbjct: 228 DQTLVKALS------------RRECFDFLQFGRCPYGKKCKYSHP 260
>gi|242036657|ref|XP_002465723.1| hypothetical protein SORBIDRAFT_01g044515 [Sorghum bicolor]
gi|241919577|gb|EER92721.1| hypothetical protein SORBIDRAFT_01g044515 [Sorghum bicolor]
Length = 155
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 46/81 (56%), Gaps = 9/81 (11%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+ Q YP RPG+PDC Y + G C Y S C FNHP ++ L +C +
Sbjct: 48 IYQQQKYPERPGQPDCQHYMQFGKCKYQSECIFNHP---------KDTLSSAWHPAECPF 98
Query: 98 YLKTGTCKYGSTCKYHHPKDR 118
Y++TGT ++GS C+++H KDR
Sbjct: 99 YMETGTYQFGSACEFYHAKDR 119
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 12/77 (15%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPY 142
+++ PER GQPDC +Y++ G CKY S C ++HPKD L CP+
Sbjct: 51 QQKYPERPGQPDCQHYMQFGKCKYQSECIFNHPKDT------------LSSAWHPAECPF 98
Query: 143 YMRTGSCKFGVACKFHH 159
YM TG+ +FG AC+F+H
Sbjct: 99 YMETGTYQFGSACEFYH 115
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 38/77 (49%), Gaps = 13/77 (16%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
Q PERP QPDC++YM G CKY ++C F+HPK+ L S A C
Sbjct: 52 QKYPERPGQPDCQHYMQFGKCKYQSECIFNHPKDT-------------LSSAWHPAECPF 98
Query: 305 YSMYGICKFGPTCRFDH 321
Y G +FG C F H
Sbjct: 99 YMETGTYQFGSACEFYH 115
>gi|328693081|gb|AEB38152.1| HUA1 [Helianthus paradoxus]
gi|328693083|gb|AEB38153.1| HUA1 [Helianthus paradoxus]
Length = 61
Score = 65.1 bits (157), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 2/59 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGV 153
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+TG CKFG+
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGL 60
Score = 62.4 bits (150), Expect = 4e-07, Method: Composition-based stats.
Identities = 31/60 (51%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNYSMYGICKFGPT 316
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y G CKFG T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKTGTCKYGST 109
++ +T C +GS C+FNHP E ELPER +P C +Y+KTG CK+G T
Sbjct: 2 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKTGKCKFGLT 61
Score = 40.8 bits (94), Expect = 1.2, Method: Composition-based stats.
Identities = 19/33 (57%), Positives = 22/33 (66%), Gaps = 4/33 (12%)
Query: 240 LSASSQN----LPERPDQPDCRYYMNTGTCKYG 268
LSAS N LPERP +P C +YM TG CK+G
Sbjct: 27 LSASENNGVLELPERPSEPQCAFYMKTGKCKFG 59
>gi|395331885|gb|EJF64265.1| hypothetical protein DICSQDRAFT_53924 [Dichomitus squalens LYAD-421
SS1]
Length = 887
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP----DCGYYLK 100
PARP CL+YR+ G C G +C+F+H + G + G+P CG+Y +
Sbjct: 9 PARP----CLYYRQ-GSCTRGVHCKFSHGIASPNGPPQSSQTVRDRGKPLVTTVCGFY-R 62
Query: 101 TGTCKYGSTCKYHHPKDRNG---------AGPVS-------FNILGLPMRQDEKSCPYYM 144
GTC++G +C + HP +G A P + + L SC +Y
Sbjct: 63 QGTCRFGDSCLFSHPSSSSGHLSNGTDTLAAPATRPTANTIVSYRALSESTTFGSCKFYA 122
Query: 145 RTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
R G+C G AC F HP TA+ G + L SM +S S
Sbjct: 123 R-GACNKGTACPFSHP-----ATAIVPKGESDLSSMQASAFGS 159
>gi|15220486|ref|NP_174250.1| putative zinc finger CCCH domain-containing protein 9 [Arabidopsis
thaliana]
gi|75268252|sp|Q9C7P4.1|C3H9_ARATH RecName: Full=Putative zinc finger CCCH domain-containing protein
9; Short=AtC3H9
gi|12323526|gb|AAG51738.1|AC068667_17 zinc finger protein, putative; 78337-80281 [Arabidopsis thaliana]
gi|332192984|gb|AEE31105.1| putative zinc finger CCCH domain-containing protein 9 [Arabidopsis
thaliana]
Length = 321
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 43/92 (46%), Gaps = 27/92 (29%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ 92
Q + Q+SPYP RPG+ DC FY + GLC Y S+CRFNHP Q ELP R
Sbjct: 41 QSKERMRQSSPYPVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQRPQ------ELPVR--- 91
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV 124
CK H DRN A P+
Sbjct: 92 ----------ICK--------HIMDRNVAEPM 105
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 23/32 (71%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
P RP + DC++Y+ G C+Y + C+F+HP +R
Sbjct: 53 PVRPGKKDCQFYLKNGLCRYRSSCRFNHPTQR 84
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 7/46 (15%)
Query: 277 KERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
KER+ QS+ P RPG+ C Y G+C++ +CRF+HP
Sbjct: 43 KERMRQSSP-------YPVRPGKKDCQFYLKNGLCRYRSSCRFNHP 81
>gi|443704541|gb|ELU01558.1| hypothetical protein CAPTEDRAFT_157003 [Capitella teleta]
Length = 740
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 16/138 (11%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRF------NHPAYAAQGAQYREEL------P 87
Q S P RP + C FYR+ G+C G++C + NH A A L
Sbjct: 7 QRSNSPTRPSDQICRFYRK-GICLRGTSCSYLHQSDQNHEAVIATPEAVDPVLDPPQIQQ 65
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPK--DRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
+ + DC + TG C++G++C+Y H D++ + P +++ + C + R
Sbjct: 66 QPKQRKDCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKP-KKEIRICSAFER 124
Query: 146 TGSCKFGVACKFHHPQPS 163
TG C++G C++ H P
Sbjct: 125 TGKCRYGEGCRYSHVIPE 142
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 61/134 (45%), Gaps = 26/134 (19%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR-EELPERNGQPD---CGYYLKTGTCKYG 107
DC +R TG+C +G++CR++H + + + E+ P + + + C + +TG C+YG
Sbjct: 72 DCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKPKKEIRICSAFERTGKCRYG 131
Query: 108 STCKYHHP----KDRNGAGPVSFNILGLPMRQDEKS-----------------CPYYMRT 146
C+Y H + A P + + Q +K+ C Y+ R
Sbjct: 132 EGCRYSHVIPEGTKEDDAKPSTEDKPPTEKSQPKKTPNPKNGDKKKIAPKKAMCRYF-RA 190
Query: 147 GSCKFGVACKFHHP 160
G+C G CKF HP
Sbjct: 191 GNCHQGDKCKFFHP 204
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKERIA-QSAASNIGPLGLPSRPGQAICSNYSMYGIC 311
+ DC + +TG C++G C++ H + + P+ P + + ICS + G C
Sbjct: 70 RKDCHVFRDTGICRFGNSCRYSHATTTDKDEEVKTEKKPVQKPKKEIR-ICSAFERTGKC 128
Query: 312 KFGPTCRFDH 321
++G CR+ H
Sbjct: 129 RYGEGCRYSH 138
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 9/93 (9%)
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN---IGPL-- 291
M S N P RP CR+Y G C G C + H ++ ++ + + P+
Sbjct: 1 MSTSSLQRSNSPTRPSDQICRFY-RKGICLRGTSCSYLHQSDQNHEAVIATPEAVDPVLD 59
Query: 292 ---GLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+ C + GIC+FG +CR+ H
Sbjct: 60 PPQIQQQPKQRKDCHVFRDTGICRFGNSCRYSH 92
>gi|223945565|gb|ACN26866.1| unknown [Zea mays]
Length = 212
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 70 FNHPAYAAQ---GAQY--REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA-GP 123
NHP Y A G Q +E PER GQP+C +++K+G CKY C+YHHP+ R A P
Sbjct: 39 MNHPMYKAADIPGHQPPPSDEYPERPGQPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPP 98
Query: 124 VSFNILGLPMR 134
+ +GLP++
Sbjct: 99 AGLSPIGLPIK 109
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 51/105 (48%), Gaps = 1/105 (0%)
Query: 194 GIVPAPGWNTY-MGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPD 252
G+ P+ W+ Y + P P + + + N A S PERP
Sbjct: 6 GMYPSSDWSGYHQVPLNPYYPPGVPFPHFPAAHMNHPMYKAADIPGHQPPPSDEYPERPG 65
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 297
QP+C++++ +G CKY C++HHP+ R + + + P+GLP +P
Sbjct: 66 QPECQHFVKSGFCKYRMKCRYHHPRSRQSAPPPAGLSPIGLPIKP 110
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP RPG+P+C + ++G C Y CR++HP
Sbjct: 60 YPERPGQPECQHFVKSGFCKYRMKCRYHHP 89
>gi|326513767|dbj|BAJ87902.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 88
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 39/83 (46%), Gaps = 8/83 (9%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
G Q+ PY RPGEPDC +Y RTGLC +G +C FNHP Q LP
Sbjct: 6 TMNSGVTMQSGPYHVRPGEPDCTYYLRTGLCSFGMSCTFNHP----QDRNTVSRLP---- 57
Query: 92 QPDCGYYLKTGTCKYGSTCKYHH 114
P + L TC S ++ H
Sbjct: 58 LPAVVFILLCFTCSQSSRLRFPH 80
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 25/33 (75%)
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
R G+PDC YYL+TG C +G +C ++HP+DRN
Sbjct: 21 RPGEPDCTYYLRTGLCSFGMSCTFNHPQDRNTV 53
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 6/53 (11%)
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 302
RP +PDC YY+ TG C +G C F+HP++R + + L LP+ +C
Sbjct: 21 RPGEPDCTYYLRTGLCSFGMSCTFNHPQDR------NTVSRLPLPAVVFILLC 67
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL 171
+R E C YY+RTG C FG++C F+HPQ + + LPL
Sbjct: 20 VRPGEPDCTYYLRTGLCSFGMSCTFNHPQDRNTVSRLPL 58
>gi|224123158|ref|XP_002330353.1| predicted protein [Populus trichocarpa]
gi|222871557|gb|EEF08688.1| predicted protein [Populus trichocarpa]
Length = 80
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 34/54 (62%), Gaps = 8/54 (14%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+EE +W+L + + + S YP R E DC++Y RTG CGYG+ CR+NHP
Sbjct: 28 LEEGVWQLGLGETE--------SEYPERSNEQDCMYYLRTGFCGYGARCRYNHP 73
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/38 (57%), Positives = 29/38 (76%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
E PER+ + DC YYL+TG C YG+ C+Y+HP+DRN G
Sbjct: 43 EYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAEG 80
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 231 LGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQ 282
L G L + PER ++ DC YY+ TG C YGA C+++HP++R A+
Sbjct: 28 LEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGARCRYNHPRDRNAE 79
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 22/30 (73%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
P R +E+ C YY+RTG C +G C+++HP+
Sbjct: 45 PERSNEQDCMYYLRTGFCGYGARCRYNHPR 74
>gi|413947009|gb|AFW79658.1| hypothetical protein ZEAMMB73_788382, partial [Zea mays]
Length = 96
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + +EE++ +L + ++ E G P RPGE DC +Y RTG CGYG CR+NHP
Sbjct: 12 SDAGTGLEESMRKLGLGEDDEAG----EEKLPERPGEADCTYYLRTGACGYGERCRYNHP 67
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/45 (55%), Positives = 33/45 (73%), Gaps = 2/45 (4%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
E+LPER G+ DC YYL+TG C YG C+Y+HP+DR PVS ++
Sbjct: 36 EKLPERPGEADCTYYLRTGACGYGERCRYNHPRDR--PAPVSASL 78
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 6/72 (8%)
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
S AG+ L S R G LG + A + LPERP + DC YY+ TG C YG C+++
Sbjct: 12 SDAGTGLEESMRKLG-LGEDDE-----AGEEKLPERPGEADCTYYLRTGACGYGERCRYN 65
Query: 275 HPKERIAQSAAS 286
HP++R A +AS
Sbjct: 66 HPRDRPAPVSAS 77
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL 177
LP R E C YY+RTG+C +G C+++HP+ + LT ASL
Sbjct: 38 LPERPGEADCTYYLRTGACGYGERCRYNHPRDRPAPVSASLTHAASL 84
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RPG+A C+ Y G C +G CR++HP
Sbjct: 38 LPERPGEADCTYYLRTGACGYGERCRYNHP 67
>gi|413947006|gb|AFW79655.1| hypothetical protein ZEAMMB73_121035 [Zea mays]
Length = 132
Score = 57.8 bits (138), Expect = 9e-06, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
G + LPER G+ DCGYYL+TG C +G C+Y+HP+DR G
Sbjct: 51 GQEANARLPERPGEADCGYYLRTGACGFGERCRYNHPRDRGG 92
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 19/29 (65%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPGE DC +Y RTG CG+G CR+NHP
Sbjct: 59 PERPGEADCGYYLRTGACGFGERCRYNHP 87
Score = 47.8 bits (112), Expect = 0.009, Method: Composition-based stats.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
++ LPERP + DC YY+ TG C +G C+++HP++R
Sbjct: 54 ANARLPERPGEADCGYYLRTGACGFGERCRYNHPRDR 90
Score = 41.6 bits (96), Expect = 0.82, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSV 184
LP R E C YY+RTG+C FG C+++HP+ GT + G S S S+
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHPRDRG-GTEVRAGGRFSPASASRSL 110
Score = 39.3 bits (90), Expect = 4.2, Method: Composition-based stats.
Identities = 16/30 (53%), Positives = 19/30 (63%)
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
LP RPG+A C Y G C FG CR++HP
Sbjct: 58 LPERPGEADCGYYLRTGACGFGERCRYNHP 87
>gi|5360265|dbj|BAA81905.1| HrZF-1 [Halocynthia roretzi]
Length = 621
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 63/172 (36%), Gaps = 33/172 (19%)
Query: 11 AVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF 70
+V NI+ I + + ++ EG +P++ C Y G+C YG C F
Sbjct: 431 SVTQSQVINIQRQIGKTPVDEDVEGDSPLH---FPSKYRTEPCTTYHTIGMCPYGEQCNF 487
Query: 71 NHPAYAAQGAQYREELPERNGQPD-----------CGYYLKTGTCKYGSTCKYHHPKDRN 119
H +L E+N P+ C + K G C YG C + H
Sbjct: 488 YH------------DLKEKNDHPNVTKTSRYKTRLCKTWQKAGECPYGVKCDFAH----- 530
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPL 171
G + N P R + C + G C +G C F H Q L T L L
Sbjct: 531 GTDDLILNSSSKP-RYKTRMCKVLQQIGRCPYGAQCTFAHKQ-DELRTDLSL 580
>gi|227438273|gb|ACP30626.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1276
Score = 57.0 bits (136), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 273 FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
FHHPK+ ++ GLP RPG+ +C++Y G C GPTC FDHP
Sbjct: 1084 FHHPKDTETSVPEGSLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 112 YHHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
+HHPKD + P S N+ GLP+R + C Y TGSC G C F HP
Sbjct: 1084 FHHPKDTETSVPEGSLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
Score = 43.5 bits (101), Expect = 0.17, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
Query: 70 FNHP----AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
F+HP +G+ E LP R G+P C Y TG+C G TC + HP
Sbjct: 1084 FHHPKDTETSVPEGSLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
Score = 40.0 bits (92), Expect = 2.0, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
S + + LP RP +P C Y +TG+C G C F HP
Sbjct: 1098 SLNLEGLPLRPGKPVCASYFHTGSCISGPTCIFDHP 1133
>gi|186479025|ref|NP_174249.2| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332192982|gb|AEE31103.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 572
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 17/89 (19%)
Query: 45 PAR-PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
P R PGE +C R C G +CR+NHP Q ELP RN C Y+L+ G
Sbjct: 215 PVRWPGE-ECWCLR----CRNGGSCRYNHPTQLPQ------ELPVRNRLQICRYFLR-GY 262
Query: 104 CKYGSTCKYHHPKDRNGAGPV----SFNI 128
CK+GS C + H +DR+ A P+ SF++
Sbjct: 263 CKFGSVCGFQHIRDRDVAEPMYENWSFDV 291
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 50/115 (43%), Gaps = 15/115 (13%)
Query: 104 CKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
C+ G +C+Y+HP P LP+R + C Y++R G CKFG C F H +
Sbjct: 228 CRNGGSCRYNHP----TQLPQE-----LPVRNRLQICRYFLR-GYCKFGSVCGFQHIRDR 277
Query: 164 SLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAG 218
+ A P+ N S ++Y+G P T + ++ P S + G
Sbjct: 278 DV--AEPMYENWSFDVRTQRRYE---IEYSGFRPEKRAKTSLDSVEPDSRKRLEG 327
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 26/57 (45%), Gaps = 11/57 (19%)
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C+ G C+++HP + P LP R IC Y + G CKFG C F H
Sbjct: 228 CRNGGSCRYNHPTQ----------LPQELPVRNRLQIC-RYFLRGYCKFGSVCGFQH 273
>gi|309256921|gb|ADO62588.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
gi|309256923|gb|ADO62589.1| putative RNA binding zinc finger nuclease [Helianthus argophyllus]
Length = 52
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRT 146
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+T
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKT 52
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 305
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 45.8 bits (107), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 5/52 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLKT 101
++ +T C +GS C+FNHP E ELPER +P C +Y+KT
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMKT 52
>gi|309256989|gb|ADO62622.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257065|gb|ADO62660.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257067|gb|ADO62661.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257117|gb|ADO62686.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257119|gb|ADO62687.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257121|gb|ADO62688.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257123|gb|ADO62689.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257155|gb|ADO62705.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|328693097|gb|AEB38160.1| HUA1 [Helianthus exilis]
gi|328693099|gb|AEB38161.1| HUA1 [Helianthus exilis]
Length = 51
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 305
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 34/51 (66%), Gaps = 2/51 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMR 145
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMK 51
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 5/51 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLK 100
++ +T C +GS C+FNHP E ELPER +P C +Y+K
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYMK 51
>gi|309257071|gb|ADO62663.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257105|gb|ADO62680.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257107|gb|ADO62681.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
gi|309257111|gb|ADO62683.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 50
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%), Gaps = 1/49 (2%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 305
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%), Gaps = 2/50 (4%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYM 144
Y+LKT TCK+GS CK++HPKD+ + S N +L LP R E C +YM
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYM 50
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYL 99
++ +T C +GS C+FNHP E ELPER +P C +Y+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPERPSEPQCAFYM 50
>gi|255077605|ref|XP_002502437.1| Endoribonuclease/protein kinase [Micromonas sp. RCC299]
gi|226517702|gb|ACO63695.1| Endoribonuclease/protein kinase [Micromonas sp. RCC299]
Length = 1053
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPA 74
YP RPGEPDC+F+ +TG C +G+ C+FNHP+
Sbjct: 1019 YPVRPGEPDCVFWIKTGRCKFGAGCKFNHPS 1049
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 25/34 (73%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+S P RP +PDC +++ TG CK+GA CKF+HP
Sbjct: 1015 TSVEYPVRPGEPDCVFWIKTGRCKFGAGCKFNHP 1048
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 27/36 (75%)
Query: 85 ELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
E P R G+PDC +++KTG CK+G+ CK++HP +G
Sbjct: 1018 EYPVRPGEPDCVFWIKTGRCKFGAGCKFNHPSGLHG 1053
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P+R E C ++++TG CKFG CKF+HP
Sbjct: 1020 PVRPGEPDCVFWIKTGRCKFGAGCKFNHP 1048
>gi|313222163|emb|CBY39153.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ + G C YG C F H + Q + +P C +++ GTC YG C +
Sbjct: 267 CITFHTLGFCPYGVRCNFVHD--KDEHRQAKHSVPSLYKTRLCRTFIERGTCPYGDKCDF 324
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT 172
H G +S++I P + K C + TG C +G C F H Q
Sbjct: 325 AH-----GTKDLSYDITKHP-KYRTKLCRSFQDTGICVYGDRCCFSHVQ----------- 367
Query: 173 GNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
S S + P SG P +P S+ + L+
Sbjct: 368 ---SPHSKPHTPTPQSG------------------ATPEAPPSMTSAELL---------- 396
Query: 233 AGAQMHILSASSQNLPERPDQPD-----CRYYMNTGTCKYGADCKFHH 275
AQ A+ + + P+ CR + TG C+YGA C F H
Sbjct: 397 --AQGEDSEATPKQKQKNKGDPETAIKICRRWKYTGKCQYGAACIFSH 442
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 59/170 (34%), Gaps = 51/170 (30%)
Query: 29 IHDNQEGGGVAQASP--YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQ 81
+HD E + P Y R C + G C YG C F H + +
Sbjct: 285 VHDKDEHRQAKHSVPSLYKTRL----CRTFIERGTCPYGDKCDFAHGTKDLSYDITKHPK 340
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHH----------PKDRNGAGP------VS 125
YR +L C + TG C YG C + H P ++GA P S
Sbjct: 341 YRTKL--------CRSFQDTGICVYGDRCCFSHVQSPHSKPHTPTPQSGATPEAPPSMTS 392
Query: 126 FNILG-------LPMRQDE---------KSCPYYMRTGSCKFGVACKFHH 159
+L P ++ + K C + TG C++G AC F H
Sbjct: 393 AELLAQGEDSEATPKQKQKNKGDPETAIKICRRWKYTGKCQYGAACIFSH 442
>gi|308800900|ref|XP_003075231.1| endoribonuclease/protein kinase IRE1-like protein (ISS)
[Ostreococcus tauri]
gi|116061785|emb|CAL52503.1| endoribonuclease/protein kinase IRE1-like protein (ISS), partial
[Ostreococcus tauri]
Length = 971
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 25/34 (73%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
Q PERP + C +YM TG CK+GA C+FHHP++
Sbjct: 924 QIFPERPGRELCEFYMKTGRCKFGASCRFHHPRD 957
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 26/32 (81%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
PER G+ C +Y+KTG CK+G++C++HHP+D
Sbjct: 926 FPERPGRELCEFYMKTGRCKFGASCRFHHPRD 957
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 22/31 (70%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
P R + C +YM+TG CKFG +C+FHHP+
Sbjct: 926 FPERPGRELCEFYMKTGRCKFGASCRFHHPR 956
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P RPG C FY +TG C +G++CRF+HP
Sbjct: 926 FPERPGRELCEFYMKTGRCKFGASCRFHHP 955
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 21/35 (60%)
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+ P P RPG+ +C Y G CKFG +CRF HP
Sbjct: 921 VAPQIFPERPGRELCEFYMKTGRCKFGASCRFHHP 955
>gi|147795077|emb|CAN60857.1| hypothetical protein VITISV_026075 [Vitis vinifera]
Length = 300
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 10/68 (14%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL--GLPSRPGQAICSNYSMYGICKF 313
CR + + +C+YGA C+F H KE + PL + +RP +C +++ G C +
Sbjct: 144 CRSWEDLASCRYGAKCQFAHGKE--------ELRPLRYSMRTRPEGNVCKQFAVTGTCPY 195
Query: 314 GPTCRFDH 321
GP CRF H
Sbjct: 196 GPRCRFSH 203
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 36/74 (48%), Gaps = 5/74 (6%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +C+YG+ C++ H K+ P+ +++ P + C + TG+C +G
Sbjct: 144 CRSWEDLASCRYGAKCQFAHGKEE--LRPLRYSMRTRP---EGNVCKQFAVTGTCPYGPR 198
Query: 155 CKFHHPQPSSLGTA 168
C+F H S L T
Sbjct: 199 CRFSHQIQSLLSTT 212
>gi|440302333|gb|ELP94655.1| tristetraproline, putative [Entamoeba invadens IP1]
Length = 211
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y+ TGTC+YGA C+F H + P+ R IC + G CK+G
Sbjct: 115 CRSYVETGTCRYGAKCQFAH--------GEKELRPVQRHPRYKTEICQTFQQTGSCKYGS 166
Query: 316 TCRFDH 321
CRF H
Sbjct: 167 RCRFIH 172
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y++TGTC+YG+ C++ H G + R + C + +TGSCK+G
Sbjct: 115 CRSYVETGTCRYGAKCQFAH-------GEKELRPVQRHPRYKTEICQTFQQTGSCKYGSR 167
Query: 155 CKFHHPQP 162
C+F H P
Sbjct: 168 CRFIHVLP 175
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 44/99 (44%), Gaps = 16/99 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C YG+ C+F H + Q Y+ E+ C + +TG+CKYGS
Sbjct: 115 CRSYVETGTCRYGAKCQFAHGEKELRPVQRHPRYKTEI--------CQTFQQTGSCKYGS 166
Query: 109 TCKYHH--PKDRNG--AGPVSFNILGLPMRQDEKSCPYY 143
C++ H P + N A S N L D + P +
Sbjct: 167 RCRFIHVLPDETNSEQAESPSSNFSELSPEDDSERLPIF 205
>gi|413916357|gb|AFW56289.1| hypothetical protein ZEAMMB73_692678 [Zea mays]
Length = 230
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 19/108 (17%)
Query: 189 GLQYAGIVPAP-GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS---- 243
G+ AG P P GW+ GP+ P I L+ GD GAG + + +
Sbjct: 48 GIAVAGGFPEPSGWDD-----GPV-PVPIPADVLV-----GGDEGAGEKPRAPAPAPTGA 96
Query: 244 ---SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNI 288
P RP +PDC YY+ GTC++G CKF+HP + S +
Sbjct: 97 VDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVRGV 144
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 65 GSNCRFNHPAYAAQGA-QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
G+ + PA A GA + P R G+PDC YYLK GTC++G CK++HP +
Sbjct: 81 GAGEKPRAPAPAPTGAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKK 136
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYR 83
G V +P RPGEPDC +Y + G C +G C+FNHPA + ++ R
Sbjct: 95 GAVDVKVRFPRRPGEPDCSYYLKFGTCRFGMKCKFNHPARKKKTSRVR 142
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P R E C YY++ G+C+FG+ CKF+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG+ CS Y +G C+FG C+F+HP
Sbjct: 103 FPRRPGEPDCSYYLKFGTCRFGMKCKFNHP 132
>gi|313235823|emb|CBY19807.1| unnamed protein product [Oikopleura dioica]
Length = 454
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 82/228 (35%), Gaps = 57/228 (25%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ + G C YG C F H + Q + +P C +++ GTC YG C +
Sbjct: 267 CITFHTLGFCPYGVRCNFVHD--KDEHRQAKHSVPSLYKTRLCRTFIERGTCPYGDKCDF 324
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT 172
H G +S++I P + K C + TG C +G C F H Q
Sbjct: 325 AH-----GTKDLSYDITKHP-KYRTKLCRSFQDTGICVYGDRCCFSHVQ----------- 367
Query: 173 GNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
S S + P SG P +P S+ + L+
Sbjct: 368 ---SPHSKPHTPSPQSG------------------ATPEAPPSMTSAELL---------- 396
Query: 233 AGAQMHILSASSQNLPERPDQPD-----CRYYMNTGTCKYGADCKFHH 275
AQ A+ + + P+ CR + TG C+YGA C F H
Sbjct: 397 --AQGEDSEATPKQKQKNKGDPETAIKICRRWKYTGKCQYGAACIFSH 442
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 59/170 (34%), Gaps = 51/170 (30%)
Query: 29 IHDNQEGGGVAQASP--YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAY-----AAQGAQ 81
+HD E + P Y R C + G C YG C F H + +
Sbjct: 285 VHDKDEHRQAKHSVPSLYKTRL----CRTFIERGTCPYGDKCDFAHGTKDLSYDITKHPK 340
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHH----------PKDRNGAGP------VS 125
YR +L C + TG C YG C + H P ++GA P S
Sbjct: 341 YRTKL--------CRSFQDTGICVYGDRCCFSHVQSPHSKPHTPSPQSGATPEAPPSMTS 392
Query: 126 FNILG-------LPMRQDE---------KSCPYYMRTGSCKFGVACKFHH 159
+L P ++ + K C + TG C++G AC F H
Sbjct: 393 AELLAQGEDSEATPKQKQKNKGDPETAIKICRRWKYTGKCQYGAACIFSH 442
>gi|113931266|ref|NP_001039082.1| zinc finger protein 36, C3H type-like 2, gene 2 [Xenopus (Silurana)
tropicalis]
gi|89267207|emb|CAJ81408.1| zinc finger protein 36 C3H type like 2 [Xenopus (Silurana)
tropicalis]
Length = 279
Score = 54.7 bits (130), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 48/117 (41%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ----DEKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PVS + GLP R+ + C + G C +G C F HP+
Sbjct: 103 RCLFIHSPQERREPPVSPDAPGLPTRRYAGPYREQCRLWRSPGGCPYGARCHFQHPK 159
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 311
CR + GTC YG C F H + + S P GLP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDAP-GLPTRRYAGPYREQCRLWRSPGGC 147
Query: 312 KFGPTCRFDHP 322
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 34/79 (43%), Gaps = 17/79 (21%)
Query: 46 ARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCK 105
A P C +R G C YG+ C F HP +RE C ++ G C
Sbjct: 131 AGPYREQCRLWRSPGGCPYGARCHFQHP------KGFREA---------CRHFAAHGDCP 175
Query: 106 YGSTCKYHH--PKDRNGAG 122
YG+ C + H P DR G+G
Sbjct: 176 YGARCHFSHSPPLDRWGSG 194
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 36/86 (41%), Gaps = 23/86 (26%)
Query: 240 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 295
+S + LP R P + CR + + G C YGA C F HPK G
Sbjct: 118 VSPDAPGLPTRRYAGPYREQCRLWRSPGGCPYGARCHFQHPK--------------GF-- 161
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDH 321
+ C +++ +G C +G C F H
Sbjct: 162 ---REACRHFAAHGDCPYGARCHFSH 184
>gi|227438197|gb|ACP30588.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 1108
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 24/33 (72%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKER 279
LPERP P+C +YM G C G DCKFHHP++R
Sbjct: 1051 LPERPGLPECLFYMKRGYCILGNDCKFHHPRDR 1083
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 26/38 (68%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
LPER G P+C +Y+K G C G+ CK+HHP+DR P
Sbjct: 1051 LPERPGLPECLFYMKRGYCILGNDCKFHHPRDRETNVP 1088
Score = 45.4 bits (106), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPG P+CLFY + G C G++C+F+HP
Sbjct: 1052 PERPGLPECLFYMKRGYCILGNDCKFHHP 1080
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 24/44 (54%)
Query: 118 RNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
R+ + S+ GLP R C +YM+ G C G CKFHHP+
Sbjct: 1038 RDLSYNTSWGFFGLPERPGLPECLFYMKRGYCILGNDCKFHHPR 1081
>gi|309256991|gb|ADO62623.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 51
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 305
Y++ T TCK+G+ CKF+HPK +IA SA+ N G L LP RP + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFY 49
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMR 145
Y+LKT TCK+GS CK++HPK + + S N +L LP R E C +YM+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFYMK 51
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLK 100
++ +T C +GS C+FNHP Y E ELPER +P C +Y+K
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKYKIASLSASENNGVLELPERPSEPQCAFYMK 51
>gi|309257099|gb|ADO62677.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 51
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 305
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFY 49
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%), Gaps = 2/51 (3%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMR 145
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM+
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMK 51
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 5/51 (9%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-----ELPERNGQPDCGYYLK 100
++ +T C +GS C+FNHP E ELPE +P C +Y+K
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLELPESPSEPQCAFYMK 51
>gi|167378199|ref|XP_001734711.1| tristetraproline [Entamoeba dispar SAW760]
gi|165903659|gb|EDR29114.1| tristetraproline, putative [Entamoeba dispar SAW760]
Length = 211
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 8/72 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ TGTC+YG C+F H + P+ R IC + G CK+G
Sbjct: 111 CRSFVETGTCRYGNKCQFAH--------GEKELRPVQRHPRYKTEICQTFHQTGTCKYGS 162
Query: 316 TCRFDHPYAGYP 327
CRF H G P
Sbjct: 163 RCRFIHVLPGEP 174
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 12/87 (13%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +++TGTC+YG+ C++ H G + R + C + +TG+CK+G
Sbjct: 111 CRSFVETGTCRYGNKCQFAH-------GEKELRPVQRHPRYKTEICQTFHQTGTCKYGSR 163
Query: 155 CKFHH-----PQPSSLGTALPLTGNAS 176
C+F H P P S +P T N S
Sbjct: 164 CRFIHVLPGEPSPVSDCVDIPQTQNFS 190
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YG+ C+F H + Q Y+ E+ C + +TGTCKYGS
Sbjct: 111 CRSFVETGTCRYGNKCQFAHGEKELRPVQRHPRYKTEI--------CQTFHQTGTCKYGS 162
Query: 109 TCKYHH 114
C++ H
Sbjct: 163 RCRFIH 168
>gi|62857339|ref|NP_001016822.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89273981|emb|CAJ81284.1| zinc finger protein 36 C3H type like 2 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 48/119 (40%), Gaps = 16/119 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ----DEKSCPYYMRTGSCKFGVACKFHHPQPS 163
C + H PVS + LP R+ + C + G C +G C F HP+ S
Sbjct: 103 RCLFIHSPQERRESPVSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKSS 161
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 240 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 295
+S + LP R P + CR + + G C YGA C F HPK
Sbjct: 118 VSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKS----------------- 160
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDH 321
+ +C +++ G C +G C F H
Sbjct: 161 --SREVCRHFAALGDCPYGARCHFSH 184
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 22/84 (26%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
A PY R C +R G C YG+ C F HP ++ + C ++
Sbjct: 131 AGPYRER-----CRLWRSPGGCPYGARCHFQHP---------------KSSREVCRHFAA 170
Query: 101 TGTCKYGSTCKYHH--PKDRNGAG 122
G C YG+ C + H P DR G+G
Sbjct: 171 LGDCPYGARCHFSHSPPLDRWGSG 194
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 311
CR + GTC YG C F H + +S S P LP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAP-RLPTRKYAGPYRERCRLWRSPGGC 147
Query: 312 KFGPTCRFDHP 322
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
>gi|320168070|gb|EFW44969.1| tRNA-dihydrouridine synthase 3 [Capsaspora owczarzaki ATCC 30864]
Length = 741
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 39/82 (47%), Gaps = 14/82 (17%)
Query: 79 GAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQD 136
G Q R + R + + C + GTC +G C++ H ++ N +S
Sbjct: 139 GRQKRNQEAAREARKNNLCKQFAIKGTCSFGDKCRFVHEREANSDAVIS----------- 187
Query: 137 EKSCPYYMRTGSCKFGVACKFH 158
CP++++ G CKFG+AC+F
Sbjct: 188 -DQCPFFLQYGQCKFGLACRFR 208
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 13/64 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + GTC +G C+F H +E + + S+ P L YG CKFG
Sbjct: 157 CKQFAIKGTCSFGDKCRFVHEREANSDAVISDQCPFFL-------------QYGQCKFGL 203
Query: 316 TCRF 319
CRF
Sbjct: 204 ACRF 207
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 9/61 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C +G CRF H A A ++ C ++L+ G CK+G C++
Sbjct: 157 CKQFAIKGTCSFGDKCRFVHEREANSDAVISDQ---------CPFFLQYGQCKFGLACRF 207
Query: 113 H 113
Sbjct: 208 R 208
>gi|412988846|emb|CCO15437.1| predicted protein [Bathycoccus prasinos]
Length = 1073
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/32 (59%), Positives = 23/32 (71%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
QN P RP+ DC +Y+ TG CKYG CKF+HP
Sbjct: 1034 QNFPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 20/30 (66%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P RP DC FY +TG C YG C+FNHP
Sbjct: 1036 FPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R DC +Y+KTG CKYG TCK++HP
Sbjct: 1036 FPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P+R + C +Y++TG CK+G CKF+HP
Sbjct: 1036 FPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 18/33 (54%)
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P P RP C Y G CK+G TC+F+HP
Sbjct: 1033 PQNFPVRPNAIDCEFYVKTGKCKYGETCKFNHP 1065
>gi|303275406|ref|XP_003056997.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461349|gb|EEH58642.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 481
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/29 (65%), Positives = 24/29 (82%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P R GQP+C +Y+KTG CK+G TCK+HHP
Sbjct: 448 PSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 34 EGGGVAQASP---YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
E V A+P YP+RPG+P+C+FY +TG C +G C+F+HP
Sbjct: 434 ERAAVIDATPPVTYPSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHP 276
P RP QP+C +Y+ TG CK+G CKFHHP
Sbjct: 448 PSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Query: 277 KERIAQSAASNIG--PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
++R A+ AA P+ PSRPGQ C Y G CKFG TC+F HP
Sbjct: 429 QKRAAERAAVIDATPPVTYPSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P R + C +Y++TG CKFG CKFHHP
Sbjct: 448 PSRPGQPECVFYVKTGRCKFGHTCKFHHP 476
>gi|309257035|gb|ADO62645.1| putative RNA binding zinc finger nuclease [Helianthus annuus]
Length = 50
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 258 YYMNTGTCKYGADCKFHHPKERIAQ-SAASNIGPLGLPSRPGQAICSNY 305
Y++ T TCK+G+ CKF+HPK++IA SA+ N G L LP P + C+ Y
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPQCAFY 49
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 32/50 (64%), Gaps = 2/50 (4%)
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYM 144
Y+LKT TCK+GS CK++HPKD+ + S N +L LP E C +YM
Sbjct: 1 YFLKTLTCKFGSKCKFNHPKDKIASLSASENNGVLVLPESPSEPQCAFYM 50
>gi|170285014|gb|AAI61276.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus (Silurana)
tropicalis]
Length = 271
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ----DEKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PVS + LP R+ + C + G C +G C F HP+
Sbjct: 103 RCLFIHSPQERRESPVSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPK 159
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGIC 311
CR + GTC YG C F H + +S S P LP+R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERRESPVSPDAP-RLPTRKYAGPYRERCRLWRSPGGC 147
Query: 312 KFGPTCRFDHP 322
+G C F HP
Sbjct: 148 PYGARCHFQHP 158
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 35/86 (40%), Gaps = 23/86 (26%)
Query: 240 LSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS 295
+S + LP R P + CR + + G C YGA C F HPK
Sbjct: 118 VSPDAPRLPTRKYAGPYRERCRLWRSPGGCPYGARCHFQHPKS----------------- 160
Query: 296 RPGQAICSNYSMYGICKFGPTCRFDH 321
+ +C +++ G C +G C F H
Sbjct: 161 --IREVCRHFAALGDCPYGARCHFSH 184
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 22/84 (26%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
A PY R C +R G C YG+ C F HP ++ + C ++
Sbjct: 131 AGPYRER-----CRLWRSPGGCPYGARCHFQHP---------------KSIREVCRHFAA 170
Query: 101 TGTCKYGSTCKYHH--PKDRNGAG 122
G C YG+ C + H P DR G+G
Sbjct: 171 LGDCPYGARCHFSHSPPLDRWGSG 194
>gi|350606345|ref|NP_001108269.2| zinc finger protein 36, C3H type-like 2, gene 2 [Xenopus laevis]
Length = 289
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 61 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 112
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQD----EKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PVS + +P R+ + C + G C +G C F HP+
Sbjct: 113 RCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCPYGARCHFQHPK 169
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C +R G C YG+ C F HP + C ++ G C YG+ C +
Sbjct: 148 CRLWRSPGGCPYGARCHFQHPKSVREA---------------CRHFAALGECPYGARCHF 192
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 193 SHSPPLDRWGSG 204
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR---PGQAICSNYSMYGICK 312
CR + GTC YG C F H + + S P P R P + C + G C
Sbjct: 99 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCP 158
Query: 313 FGPTCRFDHP 322
+G C F HP
Sbjct: 159 YGARCHFQHP 168
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 19/66 (28%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + + G C YGA C F HPK + C +++ G C +G
Sbjct: 148 CRLWRSPGGCPYGARCHFQHPKS-------------------VREACRHFAALGECPYGA 188
Query: 316 TCRFDH 321
C F H
Sbjct: 189 RCHFSH 194
>gi|163916509|gb|AAI57454.1| LOC100137650 protein [Xenopus laevis]
Length = 279
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CTRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQD----EKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PVS + +P R+ + C + G C +G C F HP+
Sbjct: 103 RCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCPYGARCHFQHPK 159
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C +R G C YG+ C F HP + C ++ G C YG+ C +
Sbjct: 138 CRLWRSPGGCPYGARCHFQHPKSVREA---------------CRHFAALGECPYGARCHF 182
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 183 SHSPPLDRWGSG 194
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 3/70 (4%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR---PGQAICSNYSMYGICK 312
CR + GTC YG C F H + + S P P R P + C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVSPDTPRIPPRRHTGPYRERCRLWRSPGGCP 148
Query: 313 FGPTCRFDHP 322
+G C F HP
Sbjct: 149 YGARCHFQHP 158
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 19/66 (28%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + + G C YGA C F HPK + C +++ G C +G
Sbjct: 138 CRLWRSPGGCPYGARCHFQHPKS-------------------VREACRHFAALGECPYGA 178
Query: 316 TCRFDH 321
C F H
Sbjct: 179 RCHFSH 184
>gi|183232062|ref|XP_652977.2| zinc finger protein [Entamoeba histolytica HM-1:IMSS]
gi|169802218|gb|EAL47591.2| zinc finger protein, putative [Entamoeba histolytica HM-1:IMSS]
gi|407042890|gb|EKE41602.1| zinc finger protein, putative [Entamoeba nuttalli P19]
gi|449705641|gb|EMD45650.1| zinc finger protein, putative [Entamoeba histolytica KU27]
Length = 212
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 53/118 (44%), Gaps = 19/118 (16%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ TGTC+YG C+F H ++ + P+ R IC + G CK+G
Sbjct: 112 CRSFVETGTCRYGNKCQFAHGEKELR--------PVQRHPRYKTEICQTFHQTGTCKYGS 163
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNS 373
CRF H G LS P + S N IS+T + S+++P + Q S
Sbjct: 164 RCRFIHVLPG-----ELSPAPDCVDISQSQNFSDISSTD------EDSNRLPVFEQLS 210
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%), Gaps = 7/74 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +++TGTC+YG+ C++ H G + R + C + +TG+CK+G
Sbjct: 112 CRSFVETGTCRYGNKCQFAH-------GEKELRPVQRHPRYKTEICQTFHQTGTCKYGSR 164
Query: 155 CKFHHPQPSSLGTA 168
C+F H P L A
Sbjct: 165 CRFIHVLPGELSPA 178
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ----YREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YG+ C+F H + Q Y+ E+ C + +TGTCKYGS
Sbjct: 112 CRSFVETGTCRYGNKCQFAHGEKELRPVQRHPRYKTEI--------CQTFHQTGTCKYGS 163
Query: 109 TCKYHH 114
C++ H
Sbjct: 164 RCRFIH 169
>gi|302805284|ref|XP_002984393.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
gi|300147781|gb|EFJ14443.1| hypothetical protein SELMODRAFT_445909 [Selaginella moellendorffii]
Length = 624
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 56/139 (40%), Gaps = 25/139 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
E WR D ++ V A C + G C G C+F H G
Sbjct: 290 EGQFWRYDTSDAKKTKRVEGA-----------CFDFVTKGSCARGDRCKFKHTF--ENGV 336
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+P+R+ C ++ G+C+ GS C+Y H D N + + N LP SC
Sbjct: 337 L----IPKRS----CYDFITKGSCERGSECRYLHSSDENASSAAADNEQQLP----PGSC 384
Query: 141 PYYMRTGSCKFGVACKFHH 159
+ + GSC+ G C+F H
Sbjct: 385 FNFFKKGSCEKGDDCRFSH 403
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 5/66 (7%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C ++ G+C+ G++C++ H + A SAA++ LP PG C N+ G C+ G
Sbjct: 343 CYDFITKGSCERGSECRYLHSSDENASSAAAD-NEQQLP--PGS--CFNFFKKGSCEKGD 397
Query: 316 TCRFDH 321
CRF H
Sbjct: 398 DCRFSH 403
>gi|302782087|ref|XP_002972817.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
gi|300159418|gb|EFJ26038.1| hypothetical protein SELMODRAFT_413447 [Selaginella moellendorffii]
Length = 568
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 25/139 (17%)
Query: 21 EEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
E WR D ++ V A C + G C G C+F H A +
Sbjct: 234 EGQFWRYDTSDAKKTKRVEGA-----------CFDFVTKGSCARGDRCKFKH---AFENG 279
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+P+R+ C ++ G+C+ GS C+Y H D N + + N LP SC
Sbjct: 280 VL---IPKRS----CYDFITKGSCERGSECRYLHSSDENASSTAADNEQQLP----PGSC 328
Query: 141 PYYMRTGSCKFGVACKFHH 159
+ + GSC+ G C+F H
Sbjct: 329 FNFFKKGSCEKGDDCRFSH 347
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C ++ G+C+ G++C++ H + A S A++ LP PG C N+ G C+ G
Sbjct: 287 CYDFITKGSCERGSECRYLHSSDENASSTAAD-NEQQLP--PGS--CFNFFKKGSCEKGD 341
Query: 316 TCRFDH 321
CRF H
Sbjct: 342 DCRFSH 347
>gi|340501726|gb|EGR28473.1| hypothetical protein IMG5_174580 [Ichthyophthirius multifiliis]
Length = 222
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 48/126 (38%), Gaps = 25/126 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y+ G C YG NCRF+H Q E + G CKYG CKY
Sbjct: 53 CFDYQ-NGNCSYGDNCRFSHRTKNTYNQQRNECRA-----------FQRGECKYGENCKY 100
Query: 113 HHPKDR------NG------AGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
H K R NG S I Q K C ++ G CK+G C+F H
Sbjct: 101 SHEKRRTCNDFQNGNCKYGENCKYSHEIQQKRTTQQTKPCRDFL-NGECKYGENCRFSHS 159
Query: 161 QPSSLG 166
Q + G
Sbjct: 160 QQAEEG 165
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 77/223 (34%), Gaps = 36/223 (16%)
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
C YG NC++ H + + EE Q + + G C YG C++ H
Sbjct: 19 CTYGENCKYAHQIQPKRQNENNEERRYETRQQKVCFDYQNGNCSYGDNCRFSHR------ 72
Query: 122 GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS-- 179
++N Q C + R G CK+G CK+ H + + GN G
Sbjct: 73 TKNTYN-------QQRNECRAFQR-GECKYGENCKYSHEKRRTCNDF--QNGNCKYGENC 122
Query: 180 -MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMH 238
+ Q P + L+ G N +S Q + G Q +
Sbjct: 123 KYSHEIQQKRTTQ--QTKPCRDF---------LNGECKYGENCRFSHSQQAEEGGNQQQN 171
Query: 239 ILSASSQ-----NLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+ S + N + CR + N G CKY +C+F H
Sbjct: 172 YKNRSYRKQYRNNNYDGQKTKQCRDFQN-GDCKYAENCRFSHE 213
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 13/78 (16%)
Query: 255 DCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI-----------CS 303
+CR + G CKYG +CK+ H K R + G + I C
Sbjct: 83 ECRAFQ-RGECKYGENCKYSHEKRRTCNDFQNGNCKYGENCKYSHEIQQKRTTQQTKPCR 141
Query: 304 NYSMYGICKFGPTCRFDH 321
++ + G CK+G CRF H
Sbjct: 142 DF-LNGECKYGENCRFSH 158
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 42/111 (37%), Gaps = 21/111 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
G C YG NC+++H + Q + P C +L G CKYG C++ H +
Sbjct: 114 GNCKYGENCKYSHEIQQKRTTQ--QTKP-------CRDFL-NGECKYGENCRFSHSQQAE 163
Query: 120 GAGPVSFNILGLPMR----------QDEKSCPYYMRTGSCKFGVACKFHHP 160
G N R Q K C + G CK+ C+F H
Sbjct: 164 EGGNQQQNYKNRSYRKQYRNNNYDGQKTKQCRDFQ-NGDCKYAENCRFSHE 213
>gi|147841870|emb|CAN78097.1| hypothetical protein VITISV_040387 [Vitis vinifera]
Length = 275
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 37 GVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYRE---ELPERNGQP 93
G+ Y R G DC++Y + G CG+GS CR+NH + + R E PER G+P
Sbjct: 28 GLRSRESYLERSGVADCVYYMKIGFCGFGSRCRYNHHRARSLISTLRSGRGEYPERIGEP 87
Query: 94 DCGYYL 99
+ L
Sbjct: 88 NIKEVL 93
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
A G + RE ER+G DC YY+K G C +GS C+Y+H + R+
Sbjct: 25 VAVGLRSRESYLERSGVADCVYYMKIGFCGFGSRCRYNHHRARS 68
>gi|205688000|sp|A3CEM4.2|C3H64_ORYSJ RecName: Full=Putative zinc finger CCCH domain-containing protein
64; Short=OsC3H64
gi|108862135|gb|ABG21865.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Oryza sativa
Japonica Group]
Length = 527
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 2/87 (2%)
Query: 202 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMN 261
N + G + ++ IAG ++ S + AG + +L Q PERP +P CRYYM
Sbjct: 167 NAHDGILDDINCAQIAGKHVGDHSNCANVIKAGV-ISLLGKLVQ-YPERPGEPFCRYYMK 224
Query: 262 TGTCKYGADCKFHHPKERIAQSAASNI 288
G CK+ CK++HPK+R + + I
Sbjct: 225 FGECKHMTFCKYNHPKDRFSCKTTNTI 251
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/32 (62%), Positives = 25/32 (78%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
PER G+P C YY+K G CK+ + CKY+HPKDR
Sbjct: 211 PERPGEPFCRYYMKFGECKHMTFCKYNHPKDR 242
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+ + YP RPGEP C +Y + G C + + C++NHP
Sbjct: 204 LGKLVQYPERPGEPFCRYYMKFGECKHMTFCKYNHP 239
>gi|449703488|gb|EMD43930.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 202
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
+NQ + YP + CLF++R G C G C F+H G Q+
Sbjct: 110 ENQLILEYSHQDKYPNKWRTQPCLFFQRYGFCRKGDECNFSHEI-PISGKQFVSVDKLFR 168
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHH 114
+P C Y+ TGTC+ G C Y H
Sbjct: 169 TKP-CKYFFTTGTCRKGENCNYSH 191
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 5/65 (7%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++ + G C+ G C + H +G VS + L K C Y+ TG+C+ G
Sbjct: 132 CLFFQRYGFCRKGDECNFSHEIPISGKQFVSVDKLFRT-----KPCKYFFTTGTCRKGEN 186
Query: 155 CKFHH 159
C + H
Sbjct: 187 CNYSH 191
>gi|302790343|ref|XP_002976939.1| hypothetical protein SELMODRAFT_416803 [Selaginella moellendorffii]
gi|300155417|gb|EFJ22049.1| hypothetical protein SELMODRAFT_416803 [Selaginella moellendorffii]
Length = 425
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG+C+YG C+F H KE ++ P+ + +C +S G C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--------DLRPVNRHPKYKTEVCRTFSAAGTCPYGK 67
Query: 316 TCRFDHPYAGYPINYGLSLPPL 337
CRF H P + LPPL
Sbjct: 68 RCRFIH---ATPKLSDVKLPPL 86
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +TG+C+YG+ C++ H K+ PV+ + P + E C + G+C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--DLRPVNRH----PKYKTE-VCRTFSAAGTCPYGKR 68
Query: 155 CKFHHPQPSSLGTALP 170
C+F H P LP
Sbjct: 69 CRFIHATPKLSDVKLP 84
>gi|449015411|dbj|BAM78813.1| unknown zinc finger protein [Cyanidioschyzon merolae strain 10D]
Length = 647
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ TG C+YG+ C+F H +E + PL + +C N++ G C +G
Sbjct: 245 CRSWIETGACRYGSKCQFAHGQE--------ELRPLPRHPKYKTKVCKNFAENGSCPYGS 296
Query: 316 TCRFDH 321
CRF H
Sbjct: 297 RCRFIH 302
Score = 45.4 bits (106), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE--RNGQPDCGYYLKTGTCKYGSTC 110
C + TG C YGS C+F H G + LP + C + + G+C YGS C
Sbjct: 245 CRSWIETGACRYGSKCQFAH------GQEELRPLPRHPKYKTKVCKNFAENGSCPYGSRC 298
Query: 111 KYHHPKDRNGA 121
++ H + R G+
Sbjct: 299 RFIHERTRTGS 309
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 11/67 (16%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM--RQDEKSCPYYMRTGSCKFG 152
C +++TG C+YGS C++ H ++ + LP + K C + GSC +G
Sbjct: 245 CRSWIETGACRYGSKCQFAHGQE---------ELRPLPRHPKYKTKVCKNFAENGSCPYG 295
Query: 153 VACKFHH 159
C+F H
Sbjct: 296 SRCRFIH 302
>gi|9454580|gb|AAF87903.1|AC015447_13 Hypothetical protein [Arabidopsis thaliana]
Length = 2123
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 53/131 (40%), Gaps = 24/131 (18%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTG 102
PY P + GLC +NC+ H +PER PDC YYL+ G
Sbjct: 1916 PYVHDPSKIAVCTKFLNGLCA-NANCKLTHKV-----------IPER--MPDCSYYLQ-G 1960
Query: 103 TCKYGSTCKYHHPKDRNGAGPVSFNIL-GLPMRQDE------KSCPYYMRTGSCKFGVAC 155
C C Y H N P+ L G DE +CP + TGSC G+ C
Sbjct: 1961 LCN-NEACPYRHVH-VNPIAPICDGFLKGYCSEGDECRKKHSYNCPVFEATGSCSQGLKC 2018
Query: 156 KFHHPQPSSLG 166
K HHP+ S G
Sbjct: 2019 KLHHPKNQSKG 2029
>gi|213623886|gb|AAI70356.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ----DEKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PV + L LP R+ + C + G C +G C F HP+
Sbjct: 103 RCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCPYGARCHFQHPK 159
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYREEL---PERNGQP---DCGYYLKTGTCK 105
C + G C YG C F H P + + L P R G P C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCP 148
Query: 106 YGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP 162
YG+ C + HPK ++C ++ G C +G C F H P
Sbjct: 149 YGARCHFQHPK------------------SARETCRHFAALGDCPYGACCHFSHSPP 187
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 256 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 310
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 311 CKFGPTCRFDHP 322
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YG+ C F HP A + C ++ G C YG+ C +
Sbjct: 138 CRLWSAPGGCPYGARCHFQHPKSARE---------------TCRHFAALGDCPYGACCHF 182
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 183 SHSPPLDRWGSG 194
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 310
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKS-------------------ARETCRHFAALGD 173
Query: 311 CKFGPTCRFDH 321
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
>gi|334182742|ref|NP_173577.2| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
gi|332191999|gb|AEE30120.1| zinc finger CCCH domain-containing protein [Arabidopsis thaliana]
Length = 2166
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 49/114 (42%), Gaps = 24/114 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC +NC+ H +PER PDC YYL+ G C C Y H N
Sbjct: 1976 GLCA-NANCKLTHKV-----------IPER--MPDCSYYLQ-GLCN-NEACPYRHVH-VN 2018
Query: 120 GAGPVSFNIL-GLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQPSSLG 166
P+ L G DE +CP + TGSC G+ CK HHP+ S G
Sbjct: 2019 PIAPICDGFLKGYCSEGDECRKKHSYNCPVFEATGSCSQGLKCKLHHPKNQSKG 2072
>gi|28393414|gb|AAO42129.1| unknown protein [Arabidopsis thaliana]
Length = 151
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 27/44 (61%)
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
R+ A + P+GLP RPG C+ Y G CKFG TC+FDHP
Sbjct: 1 RVPPRANCVLSPIGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
+GLP+R + C +Y++ G CKFG CKF HP
Sbjct: 13 IGLPLRPGVQRCTFYVQNGFCKFGSTCKFDHPM 45
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
LP R G C +Y++ G CK+GSTCK+ HP
Sbjct: 15 LPLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERI 280
LP RP C +Y+ G CK+G+ CKF HP I
Sbjct: 15 LPLRPGVQRCTFYVQNGFCKFGSTCKFDHPMGTI 48
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 45 PARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RPG C FY + G C +GS C+F+HP
Sbjct: 16 PLRPGVQRCTFYVQNGFCKFGSTCKFDHP 44
>gi|148235813|ref|NP_001081888.1| zinc finger protein 36, C3H type-like 2, gene 1 [Xenopus laevis]
gi|4580026|gb|AAD24210.1|AF061983_1 CCCH zinc finger protein C3H-4 [Xenopus laevis]
Length = 276
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ----DEKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PV + L LP R+ + C + G C +G C F HP+
Sbjct: 103 RCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCPYGARCHFQHPK 159
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYREEL---PERNGQP---DCGYYLKTGTCK 105
C + G C YG C F H P + + L P R G P C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCP 148
Query: 106 YGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP 162
YG+ C + HPK ++C ++ G C +G C F H P
Sbjct: 149 YGARCHFQHPK------------------SARETCRHFAALGDCPYGACCHFSHSPP 187
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 256 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 310
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 311 CKFGPTCRFDHP 322
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
Score = 38.5 bits (88), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 17/72 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YG+ C F HP A + C ++ G C YG+ C +
Sbjct: 138 CRLWSAPGGCPYGARCHFQHPKSARE---------------TCRHFAALGDCPYGACCHF 182
Query: 113 HH--PKDRNGAG 122
H P DR G+G
Sbjct: 183 SHSPPLDRWGSG 194
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 27/71 (38%), Gaps = 19/71 (26%)
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 310
P + CR + G C YGA C F HPK + C +++ G
Sbjct: 133 PYRERCRLWSAPGGCPYGARCHFQHPKS-------------------ARETCRHFAALGD 173
Query: 311 CKFGPTCRFDH 321
C +G C F H
Sbjct: 174 CPYGACCHFSH 184
>gi|407036780|gb|EKE38337.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 138
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 2/84 (2%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
+NQ + YP + CLF++R G C G C F+H G Q+
Sbjct: 46 ENQLILEYSHQDKYPNKWRTQPCLFFQRYGFCRKGDECNFSHEI-PVSGKQFVSVDKLFR 104
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHH 114
+P C Y+ TGTC+ G C Y H
Sbjct: 105 TKP-CKYFFTTGTCRKGENCNYSH 127
>gi|213623884|gb|AAI70354.1| C3H-4 protein [Xenopus laevis]
Length = 276
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 16/117 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C Y + C+F H Q +Y+ EL C + GTC YG
Sbjct: 51 CSRYAESGFCAYRNRCQFAHGLSELRPPVQHPKYKTEL--------CRSFHVLGTCNYGL 102
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPMRQ----DEKSCPYYMRTGSCKFGVACKFHHPQ 161
C + H PV + L LP R+ + C + G C +G C F HP+
Sbjct: 103 RCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCPYGARCHFQHPK 159
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 42/117 (35%), Gaps = 25/117 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYREEL---PERNGQP---DCGYYLKTGTCK 105
C + G C YG C F H P + + L P R G P C + G C
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDNLSLPPRRYGGPYRERCRLWSAPGGCP 148
Query: 106 YGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP 162
YG+ C + HPK ++C ++ G C +G C F H P
Sbjct: 149 YGARCHFQHPKSVR------------------ETCRHFAALGDCPYGACCHFSHSPP 187
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 256 CRYYMNTGTCKYGADCKF-HHPKERIAQSAASNIGPLGLPSR----PGQAICSNYSMYGI 310
CR + GTC YG C F H P+ER + L LP R P + C +S G
Sbjct: 89 CRSFHVLGTCNYGLRCLFIHSPQERREPPVLPDN--LSLPPRRYGGPYRERCRLWSAPGG 146
Query: 311 CKFGPTCRFDHP 322
C +G C F HP
Sbjct: 147 CPYGARCHFQHP 158
>gi|440291931|gb|ELP85173.1| hypothetical protein EIN_082550 [Entamoeba invadens IP1]
Length = 289
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 35/81 (43%), Gaps = 3/81 (3%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQP 93
E + PY + CLFY+R G C G C F H + G Q+ +P
Sbjct: 156 EQLDIPLQEPYQNKWRTQPCLFYQRYGFCRKGDECNFQH--IPSTGKQFISVDQLYRTKP 213
Query: 94 DCGYYLKTGTCKYGSTCKYHH 114
C Y+ TGTC+ G C Y H
Sbjct: 214 -CKYFFTTGTCRKGDNCNYSH 233
>gi|449493048|ref|XP_004159177.1| PREDICTED: uncharacterized protein LOC101231961 [Cucumis sativus]
Length = 286
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQ-YREELPERNGQPDCGYYLKTG 102
YP RPGE DC Y T C +G +C+F+HP + +G +E P + C YL+ G
Sbjct: 158 YPQRPGEKDCAHYMLTRTCKFGDSCKFDHPIWVPEGGIPDWKEFPFKFSFLICFTYLQRG 217
Query: 103 T 103
Sbjct: 218 V 218
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 243 SSQNLP---ERPDQPDCRYYMNTGTCKYGADCKFHHP 276
S+ NLP +RP + DC +YM T TCK+G CKF HP
Sbjct: 151 STSNLPVYPQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
P+R G+ DC +Y+ T TCK+G +CK+ HP
Sbjct: 159 PQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 294 PSRPGQAICSNYSMYGICKFGPTCRFDHP 322
P RPG+ C++Y + CKFG +C+FDHP
Sbjct: 159 PQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
P R EK C +YM T +CKFG +CKF HP
Sbjct: 159 PQRPGEKDCAHYMLTRTCKFGDSCKFDHP 187
>gi|307111265|gb|EFN59500.1| expressed protein [Chlorella variabilis]
Length = 594
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 35/77 (45%), Gaps = 26/77 (33%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++LKTGTC YG +CK+ HP D+ P C FG
Sbjct: 389 CAFFLKTGTCAYGDSCKFAHPFDK---------------------APKV----DCAFGHT 423
Query: 155 CKFHHPQ-PSSLGTALP 170
CKFHHP+ P TA+P
Sbjct: 424 CKFHHPELPPGGPTAVP 440
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 23/77 (29%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+ +TG C YG +C+F HP ++ P+ + C +G TCK+
Sbjct: 389 CAFFLKTGTCAYGDSCKFAHP---------FDKAPKVD-------------CAFGHTCKF 426
Query: 113 HHPKDRNGAGPVSFNIL 129
HHP+ G GP + +
Sbjct: 427 HHPELPPG-GPTAVPAM 442
>gi|145479755|ref|XP_001425900.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392972|emb|CAK58502.1| unnamed protein product [Paramecium tetraurelia]
Length = 155
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 37/83 (44%), Gaps = 12/83 (14%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+Y+ G C YG C F H K + Q + +P IC NY+ G C +G
Sbjct: 54 CKYWSIEGYCPYGKQCAFAHGKHEVRQK-------VHVPHNYKTQICKNYTKDGYCCYGE 106
Query: 316 TCRFDHPYAGYPINYGLSLPPLS 338
C+F HP G LPPL+
Sbjct: 107 RCQFKHPEKK-----GNKLPPLT 124
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 44/101 (43%), Gaps = 9/101 (8%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKT 101
+ + + C ++ G C YG C F H + + + +P C Y K
Sbjct: 43 TSFIVKVKTEICKYWSIEGYCPYGKQCAFAHGKHEVRQ---KVHVPHNYKTQICKNYTKD 99
Query: 102 GTCKYGSTCKYHHPKDR-NGAGPVSF-----NILGLPMRQD 136
G C YG C++ HP+ + N P+++ NI L ++Q+
Sbjct: 100 GYCCYGERCQFKHPEKKGNKLPPLTYQNLLNNIENLFLKQN 140
>gi|302797845|ref|XP_002980683.1| hypothetical protein SELMODRAFT_112852 [Selaginella moellendorffii]
gi|300151689|gb|EFJ18334.1| hypothetical protein SELMODRAFT_112852 [Selaginella moellendorffii]
Length = 119
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 39/82 (47%), Gaps = 11/82 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG+C+YG C+F H KE ++ P+ + +C +S G C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--------DLRPVNRHPKYKTEVCRTFSAAGTCPYGK 67
Query: 316 TCRFDHPYAGYPINYGLSLPPL 337
CRF H P + LPPL
Sbjct: 68 RCRFIH---ATPKLSDVKLPPL 86
Score = 38.9 bits (89), Expect = 4.6, Method: Composition-based stats.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 7/76 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +TG+C+YG+ C++ H K+ PV+ + P + E C + G+C +G
Sbjct: 16 CRSWEETGSCRYGNKCQFAHGKE--DLRPVNRH----PKYKTE-VCRTFSAAGTCPYGKR 68
Query: 155 CKFHHPQPSSLGTALP 170
C+F H P LP
Sbjct: 69 CRFIHATPKLSDVKLP 84
>gi|297850590|ref|XP_002893176.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
gi|297339018|gb|EFH69435.1| hypothetical protein ARALYDRAFT_313049 [Arabidopsis lyrata subsp.
lyrata]
Length = 2132
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 53/131 (40%), Gaps = 24/131 (18%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTG 102
PY P + GLC +NC+ H +PER PDC YYL+ G
Sbjct: 1925 PYVHDPSKIAVCTKFLNGLCA-NANCKLTHKV-----------IPER--MPDCSYYLQ-G 1969
Query: 103 TCKYGSTCKYHHPKDRNGAGPVSFNIL------GLPMRQDEK-SCPYYMRTGSCKFGVAC 155
C C Y H N + P+ L G R+ +CP + TGSC G C
Sbjct: 1970 LCN-NEACPYRHVH-VNPSAPICDGFLKGYCSDGDECRKKHSYNCPVFEATGSCSQGSKC 2027
Query: 156 KFHHPQPSSLG 166
K HHP+ S G
Sbjct: 2028 KLHHPKNQSKG 2038
>gi|145483383|ref|XP_001427714.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394797|emb|CAK60316.1| unnamed protein product [Paramecium tetraurelia]
Length = 157
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 11/92 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+Y+ G C YG C F H K+ + Q + +PS C NY+ G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK-------VHVPSNYKTKTCKNYTQDGYCCYGE 103
Query: 316 TCRFDHPYAGY----PINYGLSLPPLSILDSS 343
C+F HP I Y + L +++L +S
Sbjct: 104 RCQFKHPEKKTNKLPTIPYQILLANINLLFAS 135
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+ G C YG C + H KD + +P K+C Y + G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK------VHVPSNYKTKTCKNYTQDGYCCYGER 104
Query: 155 CKFHHPQPSS 164
C+F HP+ +
Sbjct: 105 CQFKHPEKKT 114
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ G C YG C F A+ + + +P C Y + G C YG C++
Sbjct: 51 CKYWAIEGYCPYGQQCAF---AHGKDEVRQKVHVPSNYKTKTCKNYTQDGYCCYGERCQF 107
Query: 113 HHPKDRNGAGP-VSFNIL 129
HP+ + P + + IL
Sbjct: 108 KHPEKKTNKLPTIPYQIL 125
>gi|118400634|ref|XP_001032639.1| 50S ribosomal protein [Tetrahymena thermophila]
gi|89286982|gb|EAR84976.1| 50S ribosomal protein [Tetrahymena thermophila SB210]
Length = 1347
Score = 49.3 bits (116), Expect = 0.004, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 51/141 (36%), Gaps = 46/141 (32%)
Query: 57 RRTGLCGYGSNCRF----NHPAYAAQGA------------------QYREELPERNGQPD 94
R G C +G NC++ N A Q A Q + + E GQ D
Sbjct: 33 RDQGNCQHGDNCKYLHTQNEDGQANQEAPNKEDRFGERSIQDNQRGQQQNQHNEDRGQDD 92
Query: 95 ----------CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYM 144
C YYL+ G C G CK+ H KD A P +K C +
Sbjct: 93 EFKDNEKTKICRYYLQ-GNCTKGDECKFLHQKDDGEARP-------------KKVCYNFQ 138
Query: 145 RTGSCKFGVACKFHHPQPSSL 165
TG CK G CKF H S +
Sbjct: 139 NTGFCKMGDRCKFSHDDASKV 159
Score = 44.7 bits (104), Expect = 0.097, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 15/66 (22%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRYY+ G C G +CKF H K+ +RP + +C N+ G CK G
Sbjct: 103 CRYYLQ-GNCTKGDECKFLHQKD-------------DGEARP-KKVCYNFQNTGFCKMGD 147
Query: 316 TCRFDH 321
C+F H
Sbjct: 148 RCKFSH 153
>gi|390332031|ref|XP_782924.3| PREDICTED: uncharacterized protein LOC577616 isoform 1
[Strongylocentrotus purpuratus]
Length = 886
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 79/207 (38%), Gaps = 68/207 (32%)
Query: 95 CGYYLKTGTCKYGSTCKYHHP-------KDR------NGAGPVSFNILGLPMRQDEKSCP 141
C Y++++G C YG C++ HP ++R + P S + Q ++ C
Sbjct: 124 CSYFVRSGRCSYGRNCRFLHPARPEGHSRERGSTAKPDAKTPAS-STGDKATSQPKQVCK 182
Query: 142 YYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGW 201
+Y R+G C +G C+F H S A +A+ GS + + G
Sbjct: 183 FYARSGWCSYGYRCRFSH---VSKEAASNEESDANSGSDQKTNATTEG------------ 227
Query: 202 NTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD------ 255
SI +++ SS +Q + GA+ E+PD+
Sbjct: 228 -------------SIDDGDILVSSTSQLSIDDGAE------------EQPDERKRSKRKS 262
Query: 256 -------CRYYMNTGTCKYGADCKFHH 275
CR+Y + G C+ G C+F H
Sbjct: 263 KSAKQKRCRFY-DMGHCRVGQRCRFLH 288
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 15/79 (18%)
Query: 256 CRYYMNTGTCKYGADCKFHHP-------KER------IAQSAASNIGPLGLPSRPGQAIC 302
C Y++ +G C YG +C+F HP +ER A++ AS+ G S+P Q +C
Sbjct: 124 CSYFVRSGRCSYGRNCRFLHPARPEGHSRERGSTAKPDAKTPASSTGDKAT-SQPKQ-VC 181
Query: 303 SNYSMYGICKFGPTCRFDH 321
Y+ G C +G CRF H
Sbjct: 182 KFYARSGWCSYGYRCRFSH 200
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 15/80 (18%)
Query: 50 EPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG-------------QPD-- 94
E C ++ R+G C YG NCRF HPA ++ R + + QP
Sbjct: 121 EKVCSYFVRSGRCSYGRNCRFLHPARPEGHSRERGSTAKPDAKTPASSTGDKATSQPKQV 180
Query: 95 CGYYLKTGTCKYGSTCKYHH 114
C +Y ++G C YG C++ H
Sbjct: 181 CKFYARSGWCSYGYRCRFSH 200
>gi|291225169|ref|XP_002732573.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 783
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 20/131 (15%)
Query: 50 EPDCLFYRRTGLCGYGSNCRFNH--PAYAAQG-AQYREELPERNGQPDCGYYLKTGTCKY 106
E C F+++ C +G CRF H P A G A+ + + C ++ + +C+
Sbjct: 101 EKVCTFFQKHHHCRFGFRCRFVHVVPINEAIGPARSNNNHSKLEKKTPCKFFKSSASCRA 160
Query: 107 GSTCKYHH--PKD-----RNGAGPVSFNI--LGLPMRQDEKS-------CPYYMRTGSCK 150
G C Y H P++ + + NI + + D+KS C Y+ R G+C
Sbjct: 161 GENCPYFHDSPEEHSKLLQEDVPQIEKNIKTVSKTLNHDQKSQGKPKKLCRYFAR-GNCS 219
Query: 151 FGVACKFHHPQ 161
G CKF HPQ
Sbjct: 220 MGPQCKFRHPQ 230
>gi|145553048|ref|XP_001462199.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124430037|emb|CAK94826.1| unnamed protein product [Paramecium tetraurelia]
Length = 157
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+Y+ G C YG C F H K+ + Q + +PS C NY+ G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK-------VHVPSNYKTKTCKNYTQDGYCCYGE 103
Query: 316 TCRFDHP 322
C+F HP
Sbjct: 104 RCQFKHP 110
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 6/70 (8%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+ G C YG C + H KD + +P K+C Y + G C +G
Sbjct: 51 CKYWAIEGYCPYGQQCAFAHGKDEVRQK------VHVPSNYKTKTCKNYTQDGYCCYGER 104
Query: 155 CKFHHPQPSS 164
C+F HP+ S
Sbjct: 105 CQFKHPEKKS 114
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/127 (20%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
Query: 4 NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCG 63
N+Q+ + + + E+I ++ + + + Y + C ++ G C
Sbjct: 2 NQQISCDEFDSNHSTKSCESISDEQLDEVMPSKKTNKKASYKVKVKTEICKYWAIEGYCP 61
Query: 64 YGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
YG C F H + + +P C Y + G C YG C++ HP+ ++ P
Sbjct: 62 YGQQCAFAH---GKDEVRQKVHVPSNYKTKTCKNYTQDGYCCYGERCQFKHPEKKSNKLP 118
Query: 124 -VSFNIL 129
+ + IL
Sbjct: 119 TIPYQIL 125
>gi|122215547|sp|Q3ED78.1|C3H7_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 7;
Short=AtC3H7; AltName: Full=AtSmicl
gi|134031900|gb|ABO45687.1| At1g21570 [Arabidopsis thaliana]
Length = 470
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 51/124 (41%), Gaps = 24/124 (19%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC +NC+ H +PER PDC YYL+ G C C Y H N
Sbjct: 280 GLCA-NANCKLTHKV-----------IPER--MPDCSYYLQ-GLCN-NEACPYRHVHV-N 322
Query: 120 GAGPVSFNIL-GLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT 172
P+ L G DE +CP + TGSC G+ CK HHP+ S G T
Sbjct: 323 PIAPICDGFLKGYCSEGDECRKKHSYNCPVFEATGSCSQGLKCKLHHPKNQSKGRKRKRT 382
Query: 173 GNAS 176
S
Sbjct: 383 NEPS 386
>gi|385301347|gb|EIF45541.1| tis11p [Dekkera bruxellensis AWRI1499]
Length = 403
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ ++R G C YGS C+F A+ Q + + +P C +++TGTC+YG C +
Sbjct: 311 CVQFQRNGYCPYGSKCQF---AHGEQELKRIKRCENWKTKP-CINWMRTGTCRYGKRCCF 366
Query: 113 HHPKDRNGAGPV 124
H + NG V
Sbjct: 367 KHGDEDNGTQLV 378
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + + G C YGS C++ H G + K C +MRTG+C++G
Sbjct: 311 CVQFQRNGYCPYGSKCQFAH-------GEQELKRIKRCENWKTKPCINWMRTGTCRYGKR 363
Query: 155 CKFHH 159
C F H
Sbjct: 364 CCFKH 368
>gi|189409089|ref|NP_001121591.1| ziinc finger protein Ci-ZF(C3H)-7 [Ciona intestinalis]
gi|93003058|tpd|FAA00112.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 977
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 60/150 (40%), Gaps = 27/150 (18%)
Query: 51 PDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTC 110
P C F+R G C G C F+H + A RE + C YY +G C +G C
Sbjct: 222 PVCKFFRE-GHCTKGDKCGFSH--HKASHRSRREYSKPKKVMELCQYYA-SGVCVHGDNC 277
Query: 111 KYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALP 170
Y H +IL P C Y+ C G +CKF H +P++ T
Sbjct: 278 NYMH------------DILFFP-------CKYFHSGTQCYNGDSCKFSH-EPATPATEEI 317
Query: 171 LTGNASLGSMGSSVLPSS---GLQYAGIVP 197
+ + S SSV S L+ AGI P
Sbjct: 318 IKKVHLVQSAYSSVDDSEEIKALEKAGIKP 347
>gi|167524835|ref|XP_001746753.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163775023|gb|EDQ88649.1| predicted protein [Monosiga brevicollis MX1]
Length = 391
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + NTG C+YG C+F H + + PL + +C + G+C +GP
Sbjct: 72 CRSWSNTGACRYGDKCQFAH--------GEAELRPLQRHPKYKTELCRTFHTQGVCPYGP 123
Query: 316 TCRFDH 321
C F H
Sbjct: 124 RCHFVH 129
>gi|145342006|ref|XP_001416089.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576313|gb|ABO94381.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 457
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
Q P RP + C +YM TG CK+GA CKF HP+
Sbjct: 415 QVFPSRPGREPCEFYMKTGRCKFGATCKFDHPQ 447
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/35 (57%), Positives = 22/35 (62%)
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
I P PSRPG+ C Y G CKFG TC+FDHP
Sbjct: 412 IAPQVFPSRPGREPCEFYMKTGRCKFGATCKFDHP 446
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
P R G+ C +Y+KTG CK+G+TCK+ HP+
Sbjct: 417 FPSRPGREPCEFYMKTGRCKFGATCKFDHPQ 447
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 20/31 (64%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
P R + C +YM+TG CKFG CKF HPQ
Sbjct: 417 FPSRPGREPCEFYMKTGRCKFGATCKFDHPQ 447
Score = 45.1 bits (105), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 22/30 (73%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
+P+RPG C FY +TG C +G+ C+F+HP
Sbjct: 417 FPSRPGREPCEFYMKTGRCKFGATCKFDHP 446
>gi|443705950|gb|ELU02246.1| hypothetical protein CAPTEDRAFT_213784 [Capitella teleta]
Length = 334
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 73/198 (36%), Gaps = 43/198 (21%)
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL----------GSMGSS 183
R D ++C ++ + CKFG +C F H L G+A L G S
Sbjct: 169 RNDTEACRFFAKYDWCKFGDSCHFSHAN---------LDGSADLPYQEQDLFDPEFFGFS 219
Query: 184 VLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSAS 243
+ L G P WN +L+ + + G + S+
Sbjct: 220 EDDYTELLSQGFQP---WND--------------DHDLMTRALSVLHSGEDYDDDVYSSV 262
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 303
+ ++P C ++ + G CKYGADC F H + A+ P R + I
Sbjct: 263 GPSPAKKP----CFFFQDHGYCKYGADCYFSHDVPAVPTGGATYTSP---QQRNTKDIPC 315
Query: 304 NYSMYGICKFGPTCRFDH 321
+ + C++G CRF H
Sbjct: 316 RFFLNDSCRYGDQCRFSH 333
Score = 47.0 bits (110), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 10/105 (9%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH- 72
N D + A+ L ++ + + P PA+ C F++ G C YG++C F+H
Sbjct: 235 NDDHDLMTRALSVLHSGEDYDDDVYSSVGPSPAKKP---CFFFQDHGYCKYGADCYFSHD 291
Query: 73 -PAYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYHH 114
PA GA Y P++ D C ++L +C+YG C++ H
Sbjct: 292 VPAVPTGGATYTS--PQQRNTKDIPCRFFLN-DSCRYGDQCRFSH 333
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 39/199 (19%), Positives = 65/199 (32%), Gaps = 65/199 (32%)
Query: 19 NIEEAIWRLK---IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH--- 72
++E IWRL I +++ G+ AR C F+ + C +G +C F+H
Sbjct: 142 ELKELIWRLLTDFIRVSKQNSGLISI----ARNDTEACRFFAKYDWCKFGDSCHFSHANL 197
Query: 73 ---------------PAYAAQGAQYREELPERNGQP------------------------ 93
P + EL + QP
Sbjct: 198 DGSADLPYQEQDLFDPEFFGFSEDDYTELLSQGFQPWNDDHDLMTRALSVLHSGEDYDDD 257
Query: 94 ------------DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
C ++ G CKYG+ C + H G ++ P +++ K P
Sbjct: 258 VYSSVGPSPAKKPCFFFQDHGYCKYGADCYFSHDVPAVPTGGATYTS---PQQRNTKDIP 314
Query: 142 -YYMRTGSCKFGVACKFHH 159
+ SC++G C+F H
Sbjct: 315 CRFFLNDSCRYGDQCRFSH 333
>gi|268554124|ref|XP_002635049.1| C. briggsae CBR-POS-1 protein [Caenorhabditis briggsae]
gi|52548268|gb|AAU82118.1| POS-1 [Caenorhabditis briggsae]
Length = 263
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 48/118 (40%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R+
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRSAT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 43/105 (40%), Gaps = 30/105 (28%)
Query: 82 YREELPERNGQPD------CGYYLKTGTCKYGSTCKY----------HHPKDRNGAGPVS 125
REEL + + D C Y ++ TC YG C++ HP+ RN P
Sbjct: 87 LREELMRQKRKDDAFKTALCDSYKRSATCSYGEQCRFAHGVHELRLPQHPRGRNH--PKY 144
Query: 126 FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTA 168
+L C + TG+CK+G C+F H P+ L A
Sbjct: 145 KTVL----------CDKFSTTGNCKYGTRCQFIHKIVNPTLLAQA 179
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y + TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRSATCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 308 YGICKFGPTCRFDH 321
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|170590238|ref|XP_001899879.1| Tristetraproline [Brugia malayi]
gi|158592511|gb|EDP31109.1| Tristetraproline, putative [Brugia malayi]
Length = 256
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 215 SIAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMN 261
++ G +L+ S + DL + S L ER + C+ + +
Sbjct: 3 AVIGQDLLREKPFDSGFKKSDLYIWQWFQFIHQSQVLLAERKQKRKAETHKTVPCQAWKD 62
Query: 262 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
TG C YG CKF H E + + + P R A C Y+ +G C +G C F H
Sbjct: 63 TGRCNYGKRCKFAHGPEELRPMPKTEVKIFSNP-RYRTAFCIKYTTFGYCPYGDQCHFIH 121
>gi|321252264|ref|XP_003192345.1| essential RNA-binding component of cleavage and polyadenylation
factor; Yth1p [Cryptococcus gattii WM276]
gi|317458813|gb|ADV20558.1| Essential RNA-binding component of cleavage and polyadenylation
factor, putative; Yth1p [Cryptococcus gattii WM276]
Length = 332
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P+C +++K G C+ G C Y
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDF-------------NLRTMPECIWFVKQGKCELGGECLY 144
Query: 113 HHPKDRNGAGP---VSFNILG--LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
HP+DR P F +LG P + + G C G CK HP P+
Sbjct: 145 FHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRMCEAYAAGFCPDGRDCKLAHPSPN 200
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 308
P+C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRMCEAYAA- 183
Query: 309 GICKFGPTCRFDHPYAGYP 327
G C G C+ HP P
Sbjct: 184 GFCPDGRDCKLAHPSPNRP 202
>gi|255071555|ref|XP_002499452.1| predicted protein [Micromonas sp. RCC299]
gi|226514714|gb|ACO60710.1| predicted protein [Micromonas sp. RCC299]
Length = 469
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TGTC+YGA C+F H ++ + P+ + +C ++ G C +G
Sbjct: 288 CRSWEETGTCRYGAKCQFSHGRD--------ELRPVLRHPKYKTEVCRTFAQNGTCPYGT 339
Query: 316 TCRFDH 321
CRF H
Sbjct: 340 RCRFIH 345
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
P + Q + Y+ EL C + +TGTC+YG+ C++ H +D +L P
Sbjct: 274 PPCSQQHSLYKTEL--------CRSWEETGTCRYGAKCQFSHGRDELRP------VLRHP 319
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHH---PQPSSLGTAL 169
+ E C + + G+C +G C+F H P S LGT +
Sbjct: 320 KYKTE-VCRTFAQNGTCPYGTRCRFIHQRAPTKSVLGTLV 358
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG+ C+F+H R+EL P C + + GTC YG
Sbjct: 288 CRSWEETGTCRYGAKCQFSH---------GRDELRPVLRHPKYKTEVCRTFAQNGTCPYG 338
Query: 108 STCKYHH 114
+ C++ H
Sbjct: 339 TRCRFIH 345
>gi|312071645|ref|XP_003138704.1| tristetraproline [Loa loa]
gi|307766137|gb|EFO25371.1| tristetraproline [Loa loa]
Length = 266
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 48/122 (39%), Gaps = 9/122 (7%)
Query: 208 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYY 259
+G S ++L + + DL + S L ER + C+ +
Sbjct: 10 LGEKSQDFSLKTSLSLTDFHNNDLYIWQWFQFIYQSQLLLAERKQKRKAETHKTVPCQAW 69
Query: 260 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRF 319
+TG C YG CKF H E + + + P R A+C Y+ +G C +G C F
Sbjct: 70 KDTGRCNYGKRCKFAHGPEELRPMPKAEVKVFNNP-RYRTALCIKYTTFGYCPYGDQCHF 128
Query: 320 DH 321
H
Sbjct: 129 IH 130
>gi|409051670|gb|EKM61146.1| hypothetical protein PHACADRAFT_134399 [Phanerochaete carnosa
HHB-10118-sp]
Length = 296
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 38/80 (47%), Gaps = 6/80 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQ----AICSNYSMY 308
P+C +Y G C G +C + HPKER + N G L PS P + +C NY +
Sbjct: 123 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVRRVVCQNY-LT 181
Query: 309 GICKFGPTCRFDHPYAGYPI 328
G C GP C HP P+
Sbjct: 182 GFCPLGPECPRGHPKPDLPL 201
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 43/110 (39%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 103 GLCKKGDQCEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERR 149
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + C Y+ TG C G C HP+P
Sbjct: 150 VECPDYNRGFCKLGPSCPRKHVRRVVCQNYL-TGFCPLGPECPRGHPKPD 198
>gi|118357333|ref|XP_001011916.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila]
gi|89293683|gb|EAR91671.1| hypothetical protein TTHERM_00394440 [Tetrahymena thermophila
SB210]
Length = 459
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ +++ G C+YG C+F H KE + I L + +CS Y +C++
Sbjct: 188 CKNWVSKGVCQYGQKCRFAHGKEEL-------IERLAMNKNYKTKLCSAYHKEQVCQYAA 240
Query: 316 TCRFDH 321
C F H
Sbjct: 241 RCHFKH 246
>gi|401882106|gb|EJT46379.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 2479]
gi|406700846|gb|EKD04008.1| essential RNA-binding component of cleavage and polyadenylation
factor, Yth1p [Trichosporon asahii var. asahii CBS 8904]
Length = 324
Score = 47.8 bits (112), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 52/132 (39%), Gaps = 26/132 (19%)
Query: 43 PYPARPGEPD-----CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
P P P E + C Y R LC G NC + H P C +
Sbjct: 80 PLPTHPREREKKTTVCKHYLRN-LCKVGDNCEYTHDW-------------NLRTMPTCVW 125
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNILG--LPMRQDEKS-CPYYMRTGSCKF 151
++K G C+ G C Y+HPKDR P F LG P R ++ C Y+ G C
Sbjct: 126 FVKLGKCELGGECLYYHPKDRRVECPDYNRGFCRLGPECPRRHVRRTLCQAYL-AGFCPD 184
Query: 152 GVACKFHHPQPS 163
G CK HP P
Sbjct: 185 GPDCKQAHPSPK 196
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 308
P C +++ G C+ G +C ++HPK+R + N +GP + +C Y +
Sbjct: 121 PTCVWFVKLGKCELGGECLYYHPKDRRVECPDYNRGFCRLGPECPRRHVRRTLCQAY-LA 179
Query: 309 GICKFGPTCRFDHPYAGYPINYGLSLPPL 337
G C GP C+ HP P PP+
Sbjct: 180 GFCPDGPDCKQAHPSPKLPDPESYVNPPV 208
>gi|402592884|gb|EJW86811.1| hypothetical protein WUBG_02280 [Wuchereria bancrofti]
Length = 256
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 14/120 (11%)
Query: 215 SIAGSNLIY-----SSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMN 261
++ G +L+ S + DL + S L ER + C+ + +
Sbjct: 3 AVIGQDLLREKPFDSGFEKSDLYIWQWFQFVYQSQVLLAERKQKRKAETHKTVPCQAWKD 62
Query: 262 TGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
TG C YG CKF H E + + + P R A C Y+ +G C +G C F H
Sbjct: 63 TGRCNYGKRCKFAHGPEELRPMPKAEVKIFSNP-RYRTAFCIKYTTFGYCPYGDQCHFIH 121
>gi|452823861|gb|EME30868.1| zinc finger protein isoform 2 [Galdieria sulphuraria]
gi|452823862|gb|EME30869.1| zinc finger protein isoform 1 [Galdieria sulphuraria]
Length = 364
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 46/114 (40%), Gaps = 12/114 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR +M TG C+Y + C+F H E + P+ + +C N+ G C +G
Sbjct: 259 CRSFMETGFCRYHSKCQFAHGVEELR--------PVKRHPKYKTRLCKNFVENGTCPYGS 310
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLM----NHQAISATHSIETSPDASSK 365
CRF H +G GL L + + H + ++E D SK
Sbjct: 311 RCRFIHGSSGASSFEGLQTDLLLAVQGISLGKERRHSRLPVFQTLEEKSDIHSK 364
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C Y S C+F H + + + R C +++ GTC YGS C++
Sbjct: 259 CRSFMETGFCRYHSKCQFAHGVEELRPVKRHPKYKTRL----CKNFVENGTCPYGSRCRF 314
Query: 113 HH 114
H
Sbjct: 315 IH 316
>gi|440798766|gb|ELR19831.1| zinc finger domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 740
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ TG C+YG+ C+F H ++ + P+ + IC + G C +G
Sbjct: 245 CRSFVETGACRYGSKCQFAHGRKELR--------PVLRHPKYKTEICKTFHTIGTCPYGT 296
Query: 316 TCRFDHPYAG 325
CRF H G
Sbjct: 297 RCRFIHKRPG 306
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +++TG C+YGS C++ H R PV L P + E C + G+C +G
Sbjct: 245 CRSFVETGACRYGSKCQFAH--GRKELRPV----LRHPKYKTEI-CKTFHTIGTCPYGTR 297
Query: 155 CKFHHPQPSSL-----GTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGN 207
C+F H +P LP+ G+ G S S GL G V P W + N
Sbjct: 298 CRFIHKRPGDSDIIDNSVILPVPPGGGQGTNGLSSSASVGLGPGG-VSNPEWAIWKDN 354
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 38/85 (44%), Gaps = 14/85 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YGS C+F H + +Y+ E+ C + GTC YG+
Sbjct: 245 CRSFVETGACRYGSKCQFAHGRKELRPVLRHPKYKTEI--------CKTFHTIGTCPYGT 296
Query: 109 TCKYHHPKDRNGAGPVSFNILGLPM 133
C++ H R G + N + LP+
Sbjct: 297 RCRFIH--KRPGDSDIIDNSVILPV 319
>gi|402580615|gb|EJW74564.1| hypothetical protein WUBG_14528 [Wuchereria bancrofti]
Length = 253
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ +G C + +C+F H +E + N P+ P + +C Y+M G+C +G
Sbjct: 2 CQAWLESGICNFAENCRFAHGEEELR---PCNKLPMKNPKYKTK-LCDKYTMAGLCPYGD 57
Query: 316 TCRFDHPYAG 325
C F HP A
Sbjct: 58 RCLFIHPEAS 67
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN---GQPDCGYYLKTGTCKYGST 109
C + +G+C + NCRF A+ + + +LP +N C Y G C YG
Sbjct: 2 CQAWLESGICNFAENCRF---AHGEEELRPCNKLPMKNPKYKTKLCDKYTMAGLCPYGDR 58
Query: 110 CKYHHPKDRNGAGP 123
C + HP+ N + P
Sbjct: 59 CLFIHPEASNASNP 72
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 9/72 (12%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQ---DEKSCPYYMRTGSCKF 151
C +L++G C + C++ H ++ P + LPM+ K C Y G C +
Sbjct: 2 CQAWLESGICNFAENCRFAHGEEE--LRPCN----KLPMKNPKYKTKLCDKYTMAGLCPY 55
Query: 152 GVACKFHHPQPS 163
G C F HP+ S
Sbjct: 56 GDRCLFIHPEAS 67
>gi|405118334|gb|AFR93108.1| no arches protein [Cryptococcus neoformans var. grubii H99]
Length = 332
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 19/116 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P+C +++K G C+ G C Y
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDFNLRT-------------MPECIWFVKQGKCELGGECLY 144
Query: 113 HHPKDRNGAGP---VSFNILG--LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
HP+DR P F +LG P + + G C G CK HP P+
Sbjct: 145 FHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFCPDGKDCKLAHPSPN 200
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 6/79 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 308
P+C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PECIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 309 GICKFGPTCRFDHPYAGYP 327
G C G C+ HP P
Sbjct: 184 GFCPDGKDCKLAHPSPNRP 202
>gi|297845872|ref|XP_002890817.1| hypothetical protein ARALYDRAFT_890483 [Arabidopsis lyrata subsp.
lyrata]
gi|297336659|gb|EFH67076.1| hypothetical protein ARALYDRAFT_890483 [Arabidopsis lyrata subsp.
lyrata]
Length = 473
Score = 47.4 bits (111), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 39/86 (45%), Gaps = 24/86 (27%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYY 98
Q P RPGE +C R C G +CR+NHP +LP+ Y
Sbjct: 230 TQRRHEPVRPGE-ECWCLR----CRNGRSCRYNHPT----------QLPQ---------Y 265
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPV 124
+ G CK GS CK+ H +DR+ A +
Sbjct: 266 FRRGYCKLGSFCKFQHIRDRDVAETM 291
>gi|186479027|ref|NP_001117380.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
gi|332192983|gb|AEE31104.1| Zinc finger C-x8-C-x5-C-x3-H type family protein [Arabidopsis
thaliana]
Length = 413
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 46/89 (51%), Gaps = 26/89 (29%)
Query: 45 PAR-PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
P R PGE +C R C G +CR+NHP +LP+ C Y+L+ G
Sbjct: 65 PVRWPGE-ECWCLR----CRNGGSCRYNHPT----------QLPQ-----ICRYFLR-GY 103
Query: 104 CKYGSTCKYHHPKDRNGAGPV----SFNI 128
CK+GS C + H +DR+ A P+ SF++
Sbjct: 104 CKFGSVCGFQHIRDRDVAEPMYENWSFDV 132
>gi|403418466|emb|CCM05166.1| predicted protein [Fibroporia radiculosa]
Length = 281
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 125 PECWWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCQLGPTCPRKHVRRVACQLYLTG 184
Query: 310 ICKFGPTCRFDHPYAGYPINYGLSLPP 336
C GP C HP G P+ PP
Sbjct: 185 FCPMGPDCARGHPKPGVPLPEAYEPPP 211
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 47/117 (40%), Gaps = 23/117 (19%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 105 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERR 151
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPSSLGTALP 170
P F LG P + + +C Y+ TG C G C HP+P G LP
Sbjct: 152 IECPDYNRGFCQLGPTCPRKHVRRVACQLYL-TGFCPMGPDCARGHPKP---GVPLP 204
>gi|452819712|gb|EME26766.1| zinc finger protein [Galdieria sulphuraria]
Length = 278
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR +M TG C+YG C+F H E + Q + + C N+ G C +G
Sbjct: 170 CRSFMETGFCRYGVKCQFAHGTEELRQ--------VKRHPKYKTRYCRNFMKEGNCPYGS 221
Query: 316 TCRFDHPYAG 325
CRF H G
Sbjct: 222 RCRFIHRRRG 231
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG C+F H EEL + P C ++K G C YG
Sbjct: 170 CRSFMETGFCRYGVKCQFAHGT---------EELRQVKRHPKYKTRYCRNFMKEGNCPYG 220
Query: 108 STCKYHHPK 116
S C++ H +
Sbjct: 221 SRCRFIHRR 229
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 33/71 (46%), Gaps = 7/71 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +++TG C+YG C++ H G + + + C +M+ G+C +G
Sbjct: 170 CRSFMETGFCRYGVKCQFAH-------GTEELRQVKRHPKYKTRYCRNFMKEGNCPYGSR 222
Query: 155 CKFHHPQPSSL 165
C+F H + S
Sbjct: 223 CRFIHRRRGSF 233
>gi|393244936|gb|EJD52447.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 2315
Score = 47.0 bits (110), Expect = 0.019, Method: Composition-based stats.
Identities = 28/115 (24%), Positives = 43/115 (37%), Gaps = 9/115 (7%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ + G C G +C F H AA + R C ++ K C+ G++C
Sbjct: 7 CDYFNKPGGCRRGESCTFAHVTAAAGSSDSNNAGSSRRV---CPHFSKPSGCRKGASCPD 63
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 167
H P +C Y TG C+F CK+ H P++ T
Sbjct: 64 RH------ESPTGSARPRPSRPAPRNACRTYWETGVCRFEFGCKYAHESPTASST 112
>gi|409044771|gb|EKM54252.1| hypothetical protein PHACADRAFT_174761 [Phanerochaete carnosa
HHB-10118-sp]
Length = 2312
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQD--EKS------CPYYMRT 146
C ++LK G C+YGS+C + H + A + P E S C +Y +T
Sbjct: 6 CRFHLKPGGCRYGSSCTFAHIEGATSATGGNTTDAATPGSSSTFESSPAPPGKCTFYWKT 65
Query: 147 GSCKFGVACKFHHPQPSSLGTALP 170
G CK G C+F H +P T+ P
Sbjct: 66 GDCKRGFQCRFKHDRPVDPSTSTP 89
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 19/121 (15%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL---------GLPSRPGQAICSNYS 306
CR+++ G C+YG+ C F H + + + + P+ PG+ C+ Y
Sbjct: 6 CRFHLKPGGCRYGSSCTFAHIEGATSATGGNTTDAATPGSSSTFESSPAPPGK--CTFYW 63
Query: 307 MYGICKFGPTCRFDHPYAGYPINYGLSLPPLS-----ILDSSLMNHQAISATHSIETSPD 361
G CK G CRF H P++ S P ++ + D+ L I + ET D
Sbjct: 64 KTGDCKRGFQCRFKH---DRPVDPSTSTPEVTTTRANVTDALLPFLTPIGISRLFETGSD 120
Query: 362 A 362
A
Sbjct: 121 A 121
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHP--AYAAQGAQYREELP-------ERNGQP--DCGYYLKT 101
C F+ + G C YGS+C F H A +A G + E + P C +Y KT
Sbjct: 6 CRFHLKPGGCRYGSSCTFAHIEGATSATGGNTTDAATPGSSSTFESSPAPPGKCTFYWKT 65
Query: 102 GTCKYGSTCKYHHPK 116
G CK G C++ H +
Sbjct: 66 GDCKRGFQCRFKHDR 80
>gi|340710256|ref|XP_003393709.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Bombus terrestris]
Length = 419
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N G C+ G +C++ H + I +P P IC + +GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTEGAWNDETNETIISSSVP--PVNNIC-RFFKHGICKFGN 66
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 371
C F H N + S+ +SS H + IS + +I+ + D WV+
Sbjct: 67 QCYFRHTIESVDNNV---VNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEWVK 120
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 72/188 (38%), Gaps = 19/188 (10%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--ILGLPMRQDEKSCPYYMRTGSCKFGVAC 155
Y K G C+ G+ C+Y H + GA N I+ + C ++ + G CKFG C
Sbjct: 13 YFKNGMCREGNNCRYRHTE---GAWNDETNETIISSSVPPVNNICRFF-KHGICKFGNQC 68
Query: 156 KFHHPQPSSLGTALPL--TGNASLGSMGSSVLPSSGLQYA--GIVPAPGWNTYMGNIGPL 211
F H S + N+S G S++ S+ ++ A I A W
Sbjct: 69 YFRHTIESVDNNVVNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEW----VKAPEF 124
Query: 212 SPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN----LPERPDQPDCRYYMNTGTCKY 267
P+ +A S+ + + M I A + N +P C Y TG CK
Sbjct: 125 VPSHVARSSFTIEASTTSGTSTNSSMSISYAQAVNSSDQASSPSSEPLCPYAEATGICK- 183
Query: 268 GADCKFHH 275
DC + H
Sbjct: 184 KRDCTYLH 191
>gi|307108237|gb|EFN56478.1| hypothetical protein CHLNCDRAFT_15825, partial [Chlorella
variabilis]
Length = 64
Score = 46.6 bits (109), Expect = 0.022, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG+C+YGA C+F H +E + P+ + +C ++ G C +G
Sbjct: 6 CRSWEETGSCRYGAKCQFAHGREELR--------PVLRHPKYKTEVCRTFAQSGTCPYGT 57
Query: 316 TCRFDH 321
CRF H
Sbjct: 58 RCRFIH 63
Score = 38.9 bits (89), Expect = 5.2, Method: Composition-based stats.
Identities = 22/67 (32%), Positives = 31/67 (46%), Gaps = 14/67 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG+ C+F H REEL P C + ++GTC YG
Sbjct: 6 CRSWEETGSCRYGAKCQFAHG---------REELRPVLRHPKYKTEVCRTFAQSGTCPYG 56
Query: 108 STCKYHH 114
+ C++ H
Sbjct: 57 TRCRFIH 63
Score = 37.7 bits (86), Expect = 10.0, Method: Composition-based stats.
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +TG+C+YG+ C++ H R PV L P + E C + ++G+C +G
Sbjct: 6 CRSWEETGSCRYGAKCQFAH--GREELRPV----LRHPKYKTE-VCRTFAQSGTCPYGTR 58
Query: 155 CKFHH 159
C+F H
Sbjct: 59 CRFIH 63
>gi|148225622|ref|NP_001081884.1| ZFP36 ring finger protein [Xenopus laevis]
gi|4580020|gb|AAD24207.1|AF061980_1 CCCH zinc finger protein C3H-1 [Xenopus laevis]
gi|51950038|gb|AAH82435.1| C3H-1 protein [Xenopus laevis]
gi|80477840|gb|AAI08849.1| C3H-1 protein [Xenopus laevis]
Length = 313
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TGTCKYGA C+F H K + + N P + +C + +YG C +G
Sbjct: 109 CRTFSETGTCKYGAKCQFAHGKIELRE---PNRHP-----KYKTELCHKFYLYGECPYGS 160
Query: 316 TCRFDH 321
C F H
Sbjct: 161 RCNFIH 166
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG C YG+ C+F H + EL E N P C + G C YG
Sbjct: 109 CRTFSETGTCKYGAKCQFAHG---------KIELREPNRHPKYKTELCHKFYLYGECPYG 159
Query: 108 STCKY-HHPKDRNGAGPV---SFNILGLPMRQ 135
S C + HHP+++ + + S + G+P R+
Sbjct: 160 SRCNFIHHPREQGTSQHILRQSLSYSGVPTRR 191
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 16/90 (17%)
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
PA A +Y+ EL C + +TGTCKYG+ C++ H G +
Sbjct: 95 PALPAPSPRYKTEL--------CRTFSETGTCKYGAKCQFAH-------GKIELREPNRH 139
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKF-HHPQ 161
+ + C + G C +G C F HHP+
Sbjct: 140 PKYKTELCHKFYLYGECPYGSRCNFIHHPR 169
>gi|268533062|ref|XP_002631659.1| C. briggsae CBR-MEX-1 protein [Caenorhabditis briggsae]
Length = 405
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 34/144 (23%)
Query: 235 AQMHILSASSQNLPERPDQPD-------CRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
AQ ++ + L +R + + C + GTC YG C+F H +
Sbjct: 119 AQWETMTDDERELIQRQKRKEEAFKTALCDAFKRAGTCPYGETCRFAHGE---------- 168
Query: 288 IGPLGLPSRP-GQA-------ICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
L +PS+P G+A +C +S YG C +GP C+F H + GL PL
Sbjct: 169 -NELRMPSQPRGKAHPKYKTQLCDKFSTYGQCPYGPRCQFIH-----KLKKGL---PLLE 219
Query: 340 LDSSLMNHQAISATHSIETSPDAS 363
+ +L + A T+PD S
Sbjct: 220 YNRALFQGRISPAREDEITNPDES 243
>gi|302695329|ref|XP_003037343.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
gi|300111040|gb|EFJ02441.1| hypothetical protein SCHCODRAFT_13540 [Schizophyllum commune H4-8]
Length = 287
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 4/87 (4%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C +Y G C G +C + HPKER + G L P + + I + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPSCPRKHIRRIACQLYLTG 180
Query: 310 ICKFGPTCRFDHPYAGYPINYGLSLPP 336
C GP C HP G P LPP
Sbjct: 181 FCPMGPDCPRGHPKPGLPPPEAYELPP 207
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 47/131 (35%), Gaps = 34/131 (25%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKER- 146
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS 179
+ CP Y R G CK G +C H + + L LTG +G
Sbjct: 147 -----------------KVECPDYKR-GFCKLGPSCPRKHIR--RIACQLYLTGFCPMGP 186
Query: 180 MGSSVLPSSGL 190
P GL
Sbjct: 187 DCPRGHPKPGL 197
>gi|426201512|gb|EKV51435.1| hypothetical protein AGABI2DRAFT_62161 [Agaricus bisporus var.
bisporus H97]
Length = 290
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 63/163 (38%), Gaps = 30/163 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C ++ K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECYWFAKYGYCSAGDECLYAHPKERK 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQP----SSLGTAL 169
P F LG P + K +C Y+ TG C G C HP+P +S
Sbjct: 148 IECPDYNRGFCKLGPICPRKHVRKVACQLYL-TGFCPMGPECPRGHPKPNLPLASAYEPA 206
Query: 170 PLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLS 212
P N LG P +YA + PG N +G GPL
Sbjct: 207 PALSNRELGPP-----PPGFARYADLDRVPG-NLAVGPNGPLQ 243
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 308
P+C ++ G C G +C + HPKER + N +GP+ P + + + +
Sbjct: 121 PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPI-CPRKHVRKVACQLYLT 179
Query: 309 GICKFGPTCRFDHPYAGYPI 328
G C GP C HP P+
Sbjct: 180 GFCPMGPECPRGHPKPNLPL 199
>gi|308496473|ref|XP_003110424.1| CRE-POS-1 protein [Caenorhabditis remanei]
gi|308243765|gb|EFO87717.1| CRE-POS-1 protein [Caenorhabditis remanei]
Length = 261
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGDQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 45/112 (40%), Gaps = 30/112 (26%)
Query: 83 REELPERNGQPD------CGYYLKTGTCKYGSTCKY----------HHPKDRNGAGPVSF 126
REEL + + D C Y + TC YG C++ HP+ RN P
Sbjct: 88 REELMRQKRKDDAFKTALCDSYKRNQTCSYGDQCRFAHGVHELRLPQHPRGRNH--PKYK 145
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGNAS 176
+L C + TG+CK+G C+F H P+ L A + N S
Sbjct: 146 TVL----------CDKFSTTGNCKYGTRCQFIHKLVNPTLLAQASGMLNNTS 187
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 19/77 (24%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGDQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 308 YGICKFGPTCRFDHPYA 324
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIHKLV 171
>gi|409083443|gb|EKM83800.1| hypothetical protein AGABI1DRAFT_33150 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 290
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 65/163 (39%), Gaps = 30/163 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C ++ K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECYWFAKYGYCSAGDECLYAHPKERK 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS-SLGTAL--- 169
P F LG P + K +C Y+ TG C G C HP+P+ L +A
Sbjct: 148 IECPDYNRGFCKLGPICPRKHVRKVACQLYL-TGFCPMGPECPRGHPKPNLPLASAYEPP 206
Query: 170 PLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLS 212
P N LG P +YA + PG N +G GPL
Sbjct: 207 PALSNRELGPP-----PPGFARYADLDRVPG-NLAVGPNGPLQ 243
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSMY 308
P+C ++ G C G +C + HPKER + N +GP+ P + + + +
Sbjct: 121 PECYWFAKYGYCSAGDECLYAHPKERKIECPDYNRGFCKLGPI-CPRKHVRKVACQLYLT 179
Query: 309 GICKFGPTCRFDHPYAGYPINYGLSLPP 336
G C GP C HP P+ PP
Sbjct: 180 GFCPMGPECPRGHPKPNLPLASAYEPPP 207
>gi|255081837|ref|XP_002508137.1| predicted protein [Micromonas sp. RCC299]
gi|226523413|gb|ACO69395.1| predicted protein [Micromonas sp. RCC299]
Length = 314
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 55/130 (42%), Gaps = 27/130 (20%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
++EGGG P G P C ++R G C G +CRF+H A A+ P+++
Sbjct: 212 HEEGGG---GDSRPPSRGAPICYAFQR-GECDRGDSCRFSHDANAS--------TPQKSS 259
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
P Y + G C G C++ H D N P Q + Y + G C
Sbjct: 260 AP--CYAFQKGECTRGDACRFSH--DPNAEAP-----------QRSSAPCYAFQRGECDR 304
Query: 152 GVACKFHHPQ 161
G AC+F H Q
Sbjct: 305 GDACRFSHEQ 314
>gi|190348309|gb|EDK40740.2| hypothetical protein PGUG_04838 [Meyerozyma guilliermondii ATCC
6260]
Length = 156
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C YM G C YG C+F H E + Q + P S+P C N++ YG C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAHGTEELKQVSR----PPKWRSKP----CVNWAKYGACRYGN 149
Query: 316 TCRFDH 321
C F H
Sbjct: 150 RCCFKH 155
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+K G C YG C++ H G + P + K C + + G+C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAH-------GTEELKQVSRPPKWRSKPCVNWAKYGACRYGNR 150
Query: 155 CKFHH 159
C F H
Sbjct: 151 CCFKH 155
>gi|159477867|ref|XP_001697030.1| hypothetical protein CHLREDRAFT_192634 [Chlamydomonas reinhardtii]
gi|158274942|gb|EDP00722.1| predicted protein [Chlamydomonas reinhardtii]
Length = 272
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
P R +PDC +YLK G C +G TCKY+HP+ G
Sbjct: 97 PVRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGG 130
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQP----SSLGTALPLTGNASL-----GS 179
+G P+R +E C +Y++ G C FG CK++HP+ SS G P T SL S
Sbjct: 94 VGYPVRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGGLSSYGLGQPPTAYVSLPTTTFPS 153
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAG------SNLIYSSRNQGDLGA 233
+PS+ + P G N G+ L P+++ + L ++ QG LG
Sbjct: 154 AAVYSVPSAVPTLYYLPPGMGPNQLAGSTVSLLPSAVGAMAAAQPNQLAFT--QQGALGG 211
Query: 234 GAQMHI 239
G Q +
Sbjct: 212 GTQATM 217
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
YP R EPDC Y + G C +G C++NHP
Sbjct: 96 YPVRAEEPDCAHYLKKGWCAFGPTCKYNHP 125
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 280 IAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP-YAGYPINYGLSLPPLS 338
++ SA + P+G P R + C++Y G C FGPTC+++HP G +YGL PP +
Sbjct: 83 LSLSAPNPPPPVGYPVRAEEPDCAHYLKKGWCAFGPTCKYNHPEIVGGLSSYGLGQPPTA 142
Query: 339 ILD 341
+
Sbjct: 143 YVS 145
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPK 277
P R ++PDC +Y+ G C +G CK++HP+
Sbjct: 97 PVRAEEPDCAHYLKKGWCAFGPTCKYNHPE 126
>gi|146413825|ref|XP_001482883.1| hypothetical protein PGUG_04838 [Meyerozyma guilliermondii ATCC
6260]
Length = 156
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C YM G C YG C+F H E + Q + P S+P C N++ YG C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAHGTEELKQVSR----PPKWRSKP----CVNWAKYGACRYGN 149
Query: 316 TCRFDH 321
C F H
Sbjct: 150 RCCFKH 155
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+K G C YG C++ H G + P + K C + + G+C++G
Sbjct: 98 CASYMKMGVCPYGGKCQFAH-------GTEELKQVSRPPKWRSKPCVNWAKYGACRYGNR 150
Query: 155 CKFHH 159
C F H
Sbjct: 151 CCFKH 155
>gi|392891963|ref|NP_001254325.1| Protein MEX-1, isoform a [Caenorhabditis elegans]
gi|1899062|gb|AAC47486.1| MEX-1 [Caenorhabditis elegans]
gi|14530587|emb|CAA91362.2| Protein MEX-1, isoform a [Caenorhabditis elegans]
Length = 494
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 27/117 (23%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 307
C + +G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 144 CDAFKRSGSCPYGEACRFAHGENE-----------LRMPSQPRGKAHPKYKTQLCDKFSN 192
Query: 308 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASS 364
+G C +GP C+F H + GL PLS + +L + A T+PD SS
Sbjct: 193 FGQCPYGPRCQFIH-----KLKKGL---PLSEYNRALQEGEISPARDDEITNPDESS 241
>gi|294901008|ref|XP_002777208.1| hypothetical protein Pmar_PMAR007113 [Perkinsus marinus ATCC 50983]
gi|239884700|gb|EER09024.1| hypothetical protein Pmar_PMAR007113 [Perkinsus marinus ATCC 50983]
Length = 433
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 41 ASPYPARPGEPD-CLFYRRTGLCGYGSNCRFNH---PAYAAQGAQYREELPERNGQPDCG 96
A A P +P C +RR G C +G C+F H P + + R + +P C
Sbjct: 27 AEKKAAAPRKPRVCRDWRRNGKCRFGDKCKFAHIDSPEKKTEDDKKR--AAKEKERPVCR 84
Query: 97 YYLKTGTCKYGSTCKYHHPK 116
YY C++G C+Y H +
Sbjct: 85 YYAAGKNCRFGERCRYRHER 104
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G C++G CKF H ++ RP +C Y+ C+FG
Sbjct: 40 CRDWRRNGKCRFGDKCKFAHIDSPEKKTEDDKKRAAKEKERP---VCRYYAAGKNCRFGE 96
Query: 316 TCRFDH 321
CR+ H
Sbjct: 97 RCRYRH 102
>gi|168005493|ref|XP_001755445.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162693573|gb|EDQ79925.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 154
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL 293
LP+ +P C +++ TGTC+YG++C+F HP + A SA G L
Sbjct: 49 LPQDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPFGRFRL 95
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD---RNGAGPVSFNILGL 131
LP+ +P C ++L+TGTC+YGS C++ HP + GP LGL
Sbjct: 49 LPQDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPFGRFRLGL 97
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 30/73 (41%), Gaps = 12/73 (16%)
Query: 2 PDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
P +R+ +A+Q A W D + G P P C F+ RTG
Sbjct: 19 PASRKRHLQGIAHQRAKKQ----WFDSFRDQESG--------LPQDAKRPPCTFFLRTGT 66
Query: 62 CGYGSNCRFNHPA 74
C YGS CRF HP
Sbjct: 67 CQYGSECRFEHPV 79
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 2/52 (3%)
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHP-QPSSLGTALPLTGNASLGSM 180
GLP C +++RTG+C++G C+F HP QP + P G LG M
Sbjct: 48 GLPQDAKRPPCTFFLRTGTCQYGSECRFEHPVQPPAPSAPGPF-GRFRLGLM 98
>gi|17543792|ref|NP_502805.1| Protein CCCH-5 [Caenorhabditis elegans]
gi|3881203|emb|CAB16528.1| Protein CCCH-5 [Caenorhabditis elegans]
Length = 199
Score = 46.2 bits (108), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + T C YG CKF H E + Q N+G + P + +C N+S G CK+G
Sbjct: 74 CKTFQLTKACSYGEQCKFAHSVEEL-QLKHQNLG-INNP-KYKTVLCDNFSTTGHCKYGT 130
Query: 316 TCRFDH 321
C+F H
Sbjct: 131 KCQFIH 136
>gi|326433056|gb|EGD78626.1| hypothetical protein PTSG_01604 [Salpingoeca sp. ATCC 50818]
Length = 888
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR +++ CKYG C+F H +E + P+ + +C + G+C +GP
Sbjct: 243 CRAWLDGKVCKYGEKCQFAHGEEELR--------PIQRHPKYKTELCRTFHTTGVCPYGP 294
Query: 316 TCRFDH 321
C F H
Sbjct: 295 RCHFIH 300
>gi|294874524|ref|XP_002766999.1| hypothetical protein Pmar_PMAR010979 [Perkinsus marinus ATCC 50983]
gi|239868374|gb|EEQ99716.1| hypothetical protein Pmar_PMAR010979 [Perkinsus marinus ATCC 50983]
Length = 463
Score = 46.2 bits (108), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 53 CLFYRRTGLCGYGSNCRFNH---PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGST 109
C +RR+G C +G C+F H P + + R + +P C YY C++G
Sbjct: 40 CRDWRRSGKCRFGDKCKFAHIDSPEKKIEDDKKR--AAKEKERPVCRYYAAGKNCRFGER 97
Query: 110 CKYHHPK 116
C+Y H +
Sbjct: 98 CRYRHER 104
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 9/69 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHH---PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 312
CR + +G C++G CKF H P+++I P +C Y+ C+
Sbjct: 40 CRDWRRSGKCRFGDKCKFAHIDSPEKKIEDDKKRAAKEKERP------VCRYYAAGKNCR 93
Query: 313 FGPTCRFDH 321
FG CR+ H
Sbjct: 94 FGERCRYRH 102
>gi|302842550|ref|XP_002952818.1| hypothetical protein VOLCADRAFT_93596 [Volvox carteri f.
nagariensis]
gi|300261858|gb|EFJ46068.1| hypothetical protein VOLCADRAFT_93596 [Volvox carteri f.
nagariensis]
Length = 1316
Score = 46.2 bits (108), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+ +S LP RP+ +C YYM GTC YG CK++HP
Sbjct: 826 AGTSDALPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 23/31 (74%)
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHP 160
LP R + +CPYYMR G+C +G +CK++HP
Sbjct: 831 ALPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
+ LP R +C YY++ GTC YG +CKY+HP
Sbjct: 830 DALPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 15/30 (50%), Positives = 20/30 (66%)
Query: 44 YPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
P RP +C +Y R G CGYG +C++NHP
Sbjct: 832 LPRRPNTMNCPYYMRYGTCGYGGSCKYNHP 861
>gi|154315641|ref|XP_001557143.1| predicted protein [Botryotinia fuckeliana B05.10]
Length = 739
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 46/106 (43%), Gaps = 18/106 (16%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTG 102
PYP + +FY G C +G +CRF HPA + E PE +P C +L
Sbjct: 28 PYPCK----HFVFY---GECKWGLDCRFGHPA------RIHAENPEPT-RPACKNFLSRR 73
Query: 103 TCKYGSTCKYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
C+YG C HHP GA + L LP Q + P ++
Sbjct: 74 GCQYGWKCHSHHPVATEKGASSAT---LALPTSQFTMATPGILKAA 116
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C++++ G CK+G DC+F HP A++ P+RP C N+ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE--------PTRPA---CKNFLSRRGCQYGW 79
Query: 316 TCRFDHPYA 324
C HP A
Sbjct: 80 KCHSHHPVA 88
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +++ G CK+G C++ HP + P P R +C ++ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE-------PTR---PACKNFLSRRGCQYGWK 80
Query: 155 CKFHHPQPSSLGTA 168
C HHP + G +
Sbjct: 81 CHSHHPVATEKGAS 94
>gi|149239799|ref|XP_001525775.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449898|gb|EDK44154.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 504
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG C YG C+F H ++ + P S+P C+N++ YG C++G
Sbjct: 445 CAPFMKTGVCTYGTKCQFAHGEQELKHVER----PPKWRSKP----CTNWAKYGSCRYGN 496
Query: 316 TCRFDH 321
C F H
Sbjct: 497 RCCFKH 502
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C YG+ C+F A+ Q ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 445 CAPFMKTGVCTYGTKCQF---AHGEQELKHVERPPKWRSKP-CTNWAKYGSCRYGNRCCF 500
Query: 113 HH 114
H
Sbjct: 501 KH 502
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++KTG C YG+ C++ H G + P + K C + + GSC++G
Sbjct: 445 CAPFMKTGVCTYGTKCQFAH-------GEQELKHVERPPKWRSKPCTNWAKYGSCRYGNR 497
Query: 155 CKFHH 159
C F H
Sbjct: 498 CCFKH 502
>gi|448111297|ref|XP_004201809.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
gi|359464798|emb|CCE88503.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
Length = 334
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +TG+C YGS C+F H ++ + P +P C + K GTC+YGS C +
Sbjct: 275 CASYVKTGVCPYGSKCQFAH---GESELKHVDRPPNWRSKP-CANWSKFGTCRYGSRCCF 330
Query: 113 HH 114
H
Sbjct: 331 KH 332
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C Y+ TG C YG+ C+F H + + P S+P C+N+S +G C++G
Sbjct: 275 CASYVKTGVCPYGSKCQFAHGESELKHVDR----PPNWRSKP----CANWSKFGTCRYGS 326
Query: 316 TCRFDH 321
C F H
Sbjct: 327 RCCFKH 332
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+KTG C YGS C++ H G + P K C + + G+C++G
Sbjct: 275 CASYVKTGVCPYGSKCQFAH-------GESELKHVDRPPNWRSKPCANWSKFGTCRYGSR 327
Query: 155 CKFHH 159
C F H
Sbjct: 328 CCFKH 332
>gi|410906761|ref|XP_003966860.1| PREDICTED: uncharacterized protein LOC101079369 [Takifugu rubripes]
Length = 317
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAA----QGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C YG C+F H + +Y+ EL C Y TG C YGS
Sbjct: 68 CTSYSATGFCKYGERCQFAHGLHELHIPFHHPKYKTEL--------CRSYHTTGYCYYGS 119
Query: 109 TCKY-HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
C + H+P ++ A NI C + G C FG C F H
Sbjct: 120 RCLFVHNPSEQRHAHRRRRNI----------PCRTFCSFGICPFGTRCNFLH 161
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/150 (24%), Positives = 56/150 (37%), Gaps = 21/150 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
C Y TG C YGS C F H P+ + R +P C + G C +G+ C
Sbjct: 106 CRSYHTTGYCYYGSRCLFVHNPSEQRHAHRRRRNIP-------CRTFCSFGICPFGTRCN 158
Query: 112 YHHPKDRNG----------AGPVSFNILGLPMRQDEKSCPY---YMRTGSCKFGVACKFH 158
+ H + N P+ + R+ + P+ + G C G C+F
Sbjct: 159 FLHVEGHNSDAESPDGVREKAPLPASPYAPQARELKPRLPFCHTFTTFGFCLNGTRCRFQ 218
Query: 159 HPQPSSLGTALPLTGNASLGSMGSSVLPSS 188
H P + T+ GN L +P+S
Sbjct: 219 HGLPDKIKTSAQAPGNPFLQPPPGFTVPTS 248
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 32/68 (47%), Gaps = 14/68 (20%)
Query: 256 CRYYMNTGTCKYGADCKF-HHPKE-RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
CR Y TG C YG+ C F H+P E R A NI P + CS +GIC F
Sbjct: 106 CRSYHTTGYCYYGSRCLFVHNPSEQRHAHRRRRNI--------PCRTFCS----FGICPF 153
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 154 GTRCNFLH 161
>gi|302782013|ref|XP_002972780.1| hypothetical protein SELMODRAFT_441970 [Selaginella moellendorffii]
gi|300159381|gb|EFJ26001.1| hypothetical protein SELMODRAFT_441970 [Selaginella moellendorffii]
Length = 872
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 20/69 (28%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
GE C+++RR G C G+ C F+H A C ++L C+YG+
Sbjct: 587 GEVQCVYFRR-GFCAKGNGCEFSHSAV-------------------CKFFLSGDGCRYGA 626
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 627 HCRYKHDSD 635
>gi|58263406|ref|XP_569113.1| no arches protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134108566|ref|XP_777234.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819807|sp|P0CS65.1|YTH1_CRYNB RecName: Full=mRNA 3'-end-processing protein YTH1
gi|338819808|sp|P0CS64.1|YTH1_CRYNJ RecName: Full=mRNA 3'-end-processing protein YTH1
gi|50259919|gb|EAL22587.1| hypothetical protein CNBB4640 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223763|gb|AAW41806.1| no arches protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 332
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 44/116 (37%), Gaps = 19/116 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P C +++K G C+ G C Y
Sbjct: 99 CKHYLRN-LCKMGDNCEYTHDF-------------NLRTMPVCIWFVKQGKCELGGECLY 144
Query: 113 HHPKDRNGAGP---VSFNILG--LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
HP+DR P F +LG P + + G C G CK HP P+
Sbjct: 145 FHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAAGFCPDGKDCKLAHPSPN 200
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 37/79 (46%), Gaps = 6/79 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 308
P C +++ G C+ G +C + HP++R + N G L P+ P + I C Y+
Sbjct: 125 PVCIWFVKQGKCELGGECLYFHPRDRRVECPDYNRGFCVLGPNCPRKHIRRRLCDAYAA- 183
Query: 309 GICKFGPTCRFDHPYAGYP 327
G C G C+ HP P
Sbjct: 184 GFCPDGKDCKLAHPSPNRP 202
>gi|268567848|ref|XP_002647887.1| Hypothetical protein CBG23753 [Caenorhabditis briggsae]
gi|52548266|gb|AAU82117.1| POS-1 [Caenorhabditis briggsae]
Length = 271
Score = 45.8 bits (107), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 47/118 (39%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R+
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRSQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQN----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 28/103 (27%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y + TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRSQTCSYGEQCRFAH-----------GVHELRLPQNPRGRNHPKYKTVLCDKFST 154
Query: 308 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 350
G CK+G C+F H P L +S ++N+ A+
Sbjct: 155 TGNCKYGTRCQFIHKIVN---------PTLLAQESGILNNTAV 188
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 39/94 (41%), Gaps = 28/94 (29%)
Query: 82 YREELPERNGQPD------CGYYLKTGTCKYGSTCKYHH----------PKDRNGAGPVS 125
REEL + + D C Y ++ TC YG C++ H P+ RN P
Sbjct: 87 LREELMRQKRKDDAFKTALCDSYKRSQTCSYGEQCRFAHGVHELRLPQNPRGRNH--PKY 144
Query: 126 FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+L C + TG+CK+G C+F H
Sbjct: 145 KTVL----------CDKFSTTGNCKYGTRCQFIH 168
>gi|347840056|emb|CCD54628.1| hypothetical protein [Botryotinia fuckeliana]
Length = 398
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 34/104 (32%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTG 102
PYP + +FY G C +G +CRF HPA + E PE +P C +L
Sbjct: 28 PYPCK----HFVFY---GECKWGLDCRFGHPA------RIHAENPEPT-RPACKNFLSRR 73
Query: 103 TCKYGSTCKYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMR 145
C+YG C HHP GA + L LP Q + P ++
Sbjct: 74 GCQYGWKCHSHHPVATEKGASSAT---LALPTSQFTMATPGILK 114
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C++++ G CK+G DC+F HP A++ P+RP C N+ C++G
Sbjct: 31 CKHFVFYGECKWGLDCRFGHPARIHAENPE--------PTRPA---CKNFLSRRGCQYGW 79
Query: 316 TCRFDHPYA 324
C HP A
Sbjct: 80 KCHSHHPVA 88
>gi|328877006|gb|EGG25369.1| CCCH-type zinc finger-containing protein [Dictyostelium
fasciculatum]
Length = 699
Score = 45.8 bits (107), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 33/74 (44%), Gaps = 14/74 (18%)
Query: 250 RPDQPD----CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNY 305
R D P C+ + +GTC YG CK+ H + + +IG C +
Sbjct: 121 REDVPKELRLCQLNLRSGTCTYGDSCKYSHDLVKYMELKPKSIGDK----------CIFF 170
Query: 306 SMYGICKFGPTCRF 319
YG CK+G TCRF
Sbjct: 171 DTYGFCKYGITCRF 184
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 11/77 (14%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
Q RE++P+ C L++GTC YG +CKY H + L + C
Sbjct: 119 QRREDVPKELRL--CQLNLRSGTCTYGDSCKYSHD---------LVKYMELKPKSIGDKC 167
Query: 141 PYYMRTGSCKFGVACKF 157
++ G CK+G+ C+F
Sbjct: 168 IFFDTYGFCKYGITCRF 184
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 6/60 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C R+G C YG +C+++H +Y E P+ G C ++ G CKYG TC++
Sbjct: 131 CQLNLRSGTCTYGDSCKYSHDL-----VKYMELKPKSIGDK-CIFFDTYGFCKYGITCRF 184
>gi|229596656|ref|XP_001007937.3| zinc finger protein [Tetrahymena thermophila]
gi|225565181|gb|EAR87692.3| zinc finger protein [Tetrahymena thermophila SB210]
Length = 309
Score = 45.4 bits (106), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 9/83 (10%)
Query: 241 SASSQNLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
+AS+ +PE C+ ++ G C YG CKF H K + Q A+N
Sbjct: 167 AASTNVIPEEAKYKTEMCKNWVENGKCNYGDKCKFAHGKNELVQKVAAN-------KHFK 219
Query: 299 QAICSNYSMYGICKFGPTCRFDH 321
C Y +C +GP C F H
Sbjct: 220 TKKCKQYYESCVCNYGPRCHFVH 242
>gi|392576362|gb|EIW69493.1| hypothetical protein TREMEDRAFT_68721 [Tremella mesenterica DSM
1558]
Length = 346
Score = 45.4 bits (106), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 45/117 (38%), Gaps = 21/117 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y R LC G NC + H P C +++ G C+ G C Y
Sbjct: 102 CKHYLRN-LCKMGDNCEYTHDF-------------NLRTMPVCVWFVMAGKCELGGECLY 147
Query: 113 HHPKDRNGAGP---VSFNILG--LPMRQDEKS-CPYYMRTGSCKFGVACKFHHPQPS 163
+HP+DR P F LG P R + C YM G C G CK HP P
Sbjct: 148 YHPRDRRVECPDYNRGFCRLGPECPRRHIRRQICGAYM-AGFCPDGPNCKLAHPSPK 203
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 6/80 (7%)
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN-----IGPLGLPSRPGQAICSNYSM 307
P C +++ G C+ G +C ++HP++R + N +GP + IC Y M
Sbjct: 127 MPVCVWFVMAGKCELGGECLYYHPRDRRVECPDYNRGFCRLGPECPRRHIRRQICGAY-M 185
Query: 308 YGICKFGPTCRFDHPYAGYP 327
G C GP C+ HP P
Sbjct: 186 AGFCPDGPNCKLAHPSPKLP 205
>gi|384485557|gb|EIE77737.1| hypothetical protein RO3G_02441 [Rhizopus delemar RA 99-880]
Length = 434
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ G C+YG+ C++ H ++ I + +R IC +Y + G C +G
Sbjct: 283 CRNWIELGVCRYGSKCRYAHGEQEIR--------TITRHARYKTEICRDYHLDGTCPYGT 334
Query: 316 TCRFDHPYAGYPI 328
C F H A PI
Sbjct: 335 RCTFIH--ASEPI 345
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 33/80 (41%), Gaps = 15/80 (18%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKS 139
A Y+ EL C +++ G C+YGS C+Y H G + R +
Sbjct: 276 ALYKTEL--------CRNWIELGVCRYGSKCRYAH-------GEQEIRTITRHARYKTEI 320
Query: 140 CPYYMRTGSCKFGVACKFHH 159
C Y G+C +G C F H
Sbjct: 321 CRDYHLDGTCPYGTRCTFIH 340
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH----PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + G+C YGS CR+ H + A+Y+ E+ C Y GTC YG+
Sbjct: 283 CRNWIELGVCRYGSKCRYAHGEQEIRTITRHARYKTEI--------CRDYHLDGTCPYGT 334
Query: 109 TCKYHHPKD 117
C + H +
Sbjct: 335 RCTFIHASE 343
>gi|222635942|gb|EEE66074.1| hypothetical protein OsJ_22091 [Oryza sativa Japonica Group]
Length = 1972
Score = 45.4 bits (106), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC ++C+ H LPER PDC Y+L+ G C C Y H K N
Sbjct: 1773 GLCS-NTSCKLTHKV-----------LPER--MPDCSYFLR-GLC-TNIACPYRHVK-VN 1815
Query: 120 GAGPVSFNIL-GLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
PV + L G DE CP + TG C G CK HHP+
Sbjct: 1816 LNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQGSRCKLHHPK 1864
>gi|50307627|ref|XP_453793.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642927|emb|CAH00889.1| KLLA0D16610p [Kluyveromyces lactis]
Length = 310
Score = 45.4 bits (106), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + GTCKYG C+F H + SN ++P C N+ YG C++G
Sbjct: 214 CESFATKGTCKYGNKCQFAHGLHELKIKERSN----NFRTKP----CVNWQKYGYCRYGK 265
Query: 316 TCRFDH 321
C F H
Sbjct: 266 RCCFKH 271
>gi|170585736|ref|XP_001897638.1| Zinc finger C-x8-C-x5-C-x3-H type containing protein [Brugia
malayi]
gi|158594945|gb|EDP33522.1| Zinc finger C-x8-C-x5-C-x3-H type containing protein, putative
[Brugia malayi]
Length = 355
Score = 45.4 bits (106), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 67/178 (37%), Gaps = 32/178 (17%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
Y C+ G++C + H DRN + +++C YY+ G C FG +C++
Sbjct: 25 YFANNICREGASCPFSH--DRNS--------------KPDRTCRYYL-IGKCDFGTSCRY 67
Query: 158 HHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIA 217
H +P G + + GS ++ + +G + V G++ + T
Sbjct: 68 DHKRPPLDGVKAVKSVARTTGSPNATKVVENGCSNSEGVTTAATVNRSGHVFSVDATEFI 127
Query: 218 GSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH 275
S + L + S S +LP P Y TG C G C+F H
Sbjct: 128 PSWKV--------LALSEVNTVASGSLGSLPLCP-------YFETGDCDKGDKCQFVH 170
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/122 (26%), Positives = 49/122 (40%), Gaps = 37/122 (30%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N C+ GA C F H + S+P + Y + G C FG
Sbjct: 23 CRYFAN-NICREGASCPFSHDRN----------------SKPDRT--CRYYLIGKCDFGT 63
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 375
+CR+DH PPL + +A+ + SP+A+ + N NS+
Sbjct: 64 SCRYDH-----------KRPPLDGV-------KAVKSVARTTGSPNATKVVENGCSNSEG 105
Query: 376 VS 377
V+
Sbjct: 106 VT 107
>gi|281206643|gb|EFA80829.1| hypothetical protein PPL_06417 [Polysphondylium pallidum PN500]
Length = 388
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 15/84 (17%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKS 139
++Y+ EL C + +TG C+YG C++ H +D PV + P + E +
Sbjct: 151 SRYKTEL--------CRSFAETGICRYGFKCQFAHGRDE--LRPV----MRHPKYKTE-T 195
Query: 140 CPYYMRTGSCKFGVACKFHHPQPS 163
C + GSC +G C+F H +PS
Sbjct: 196 CKTFHTVGSCPYGSRCRFIHSKPS 219
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG C+YG C+F H ++ + P+ + C + G C +G
Sbjct: 158 CRSFAETGICRYGFKCQFAHGRDELR--------PVMRHPKYKTETCKTFHTVGSCPYGS 209
Query: 316 TCRFDH 321
CRF H
Sbjct: 210 RCRFIH 215
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 14/91 (15%)
Query: 31 DNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERN 90
D G + + +R C + TG+C YG C+F H R+EL
Sbjct: 136 DGSSNGDIEEEINGQSRYKTELCRSFAETGICRYGFKCQFAHG---------RDELRPVM 186
Query: 91 GQPD-----CGYYLKTGTCKYGSTCKYHHPK 116
P C + G+C YGS C++ H K
Sbjct: 187 RHPKYKTETCKTFHTVGSCPYGSRCRFIHSK 217
>gi|5869806|emb|CAA76889.2| zinc finger protein [Danio rerio]
Length = 308
Score = 45.1 bits (105), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 65/193 (33%), Gaps = 47/193 (24%)
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYA 193
R + C Y TG+CK+ C+F H + +PS
Sbjct: 48 RYKTELCSRYAETGTCKYAERCQFAH-------------------GLHDLHVPSR----- 83
Query: 194 GIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ 253
P + T + + + G+ ++ +H L P R +
Sbjct: 84 ----HPKYKTELCRTYHTAGYCVYGTRCLF-------------VHNLKEQRPIRPRRRNV 126
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS-----RPGQAICSNYSMY 308
P CR + G C +G C F H + A PS +P A+C +S +
Sbjct: 127 P-CRTFRAFGVCPFGTRCHFLHVEGGSESDGAEEEQTWQPPSQSQEWKPRGALCRTFSAF 185
Query: 309 GICKFGPTCRFDH 321
G C +G CRF H
Sbjct: 186 GFCLYGTRCRFQH 198
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C Y C+F H + ++ +Y+ EL C Y G C YG+
Sbjct: 54 CSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYKTEL--------CRTYHTAGYCVYGT 105
Query: 109 TCKY-HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
C + H+ K++ P N+ C + G C FG C F H
Sbjct: 106 RCLFVHNLKEQRPIRPRRRNV----------PCRTFRAFGVCPFGTRCHFLH 147
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 12/119 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y G C YG+ C F H + R P R P C + G C +G+ C +
Sbjct: 92 CRTYHTAGYCVYGTRCLFVH-----NLKEQRPIRPRRRNVP-CRTFRAFGVCPFGTRCHF 145
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKS------CPYYMRTGSCKFGVACKFHHPQPSSL 165
H + + + P Q ++ C + G C +G C+F H P+++
Sbjct: 146 LHVEGGSESDGAEEEQTWQPPSQSQEWKPRGALCRTFSAFGFCLYGTRCRFQHGLPNTI 204
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 61/185 (32%), Gaps = 44/185 (23%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQ---DEKSCPYYMRTGSCKF 151
C Y +TGTCKY C++ H + L +P R + C Y G C +
Sbjct: 54 CSRYAETGTCKYAERCQFAH----------GLHDLHVPSRHPKYKTELCRTYHTAGYCVY 103
Query: 152 GVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPL 211
G C F H +L P+ +P + G+ P
Sbjct: 104 GTRCLFVH----NLKEQRPIRPR-------RRNVPCRTFRAFGVCP-------------- 138
Query: 212 SPTSIAGSNLIYSSRNQGDLGAGA-QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
G+ + G GA + SQ+ +P CR + G C YG
Sbjct: 139 -----FGTRCHFLHVEGGSESDGAEEEQTWQPPSQSQEWKPRGALCRTFSAFGFCLYGTR 193
Query: 271 CKFHH 275
C+F H
Sbjct: 194 CRFQH 198
>gi|164657462|ref|XP_001729857.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
gi|159103751|gb|EDP42643.1| hypothetical protein MGL_2843 [Malassezia globosa CBS 7966]
Length = 500
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 42/100 (42%), Gaps = 17/100 (17%)
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
A+ Q A R + P+ C YY +TGTC+ G+ C + H R P G +
Sbjct: 222 AHKQQRALERAKTPQL-----CTYYTRTGTCRRGTQCPFIHDDQRKALCPGVLKPSGCVL 276
Query: 134 ------------RQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
Q+ C +++R SC+ G AC F H Q
Sbjct: 277 PPGTCLLSHTRCPQNVPHCVHFLRLHSCRNGDACAFTHAQ 316
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 39/105 (37%), Gaps = 16/105 (15%)
Query: 245 QNLPERPDQPD-CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI-- 301
Q ER P C YY TGTC+ G C F H +R A + P G PG +
Sbjct: 226 QRALERAKTPQLCTYYTRTGTCRRGTQCPFIHDDQRKALCPGV-LKPSGCVLPPGTCLLS 284
Query: 302 ----------CSNYSMYGICKFGPTCRFDHPYAGY--PINYGLSL 334
C ++ C+ G C F H + P+ +L
Sbjct: 285 HTRCPQNVPHCVHFLRLHSCRNGDACAFTHAQVAHDAPVCRAFAL 329
>gi|341885390|gb|EGT41325.1| CBN-MEX-1 protein [Caenorhabditis brenneri]
Length = 501
Score = 45.1 bits (105), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 307
C + G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 161 CDAFKRNGSCPYGESCRFAHGE-----------NELRMPSQPRGKAHPKYKTQLCDKFST 209
Query: 308 YGICKFGPTCRFDHPY-AGYPI 328
YG C +GP C+F H G P+
Sbjct: 210 YGQCPYGPRCQFIHKLKKGLPL 231
>gi|449679922|ref|XP_004209452.1| PREDICTED: uncharacterized protein LOC101235045 [Hydra
magnipapillata]
Length = 1104
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 35/158 (22%), Positives = 60/158 (37%), Gaps = 47/158 (29%)
Query: 2 PDNRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
P R+ + VA+++ + + K+ +E A + P C F+++ G
Sbjct: 904 PKKRKSEKQKVASRAY------LDKRKVEIQREAEKKAHDASLP-------CPFFKKKGF 950
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
C YG CRF+H + R EL C +Y+ G C+ + C + H
Sbjct: 951 CDYGDQCRFSHKIEIDK----RIEL--------CKFYV-VGACRKENNCLFMH------- 990
Query: 122 GPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
++ C +Y SC G +CK+ H
Sbjct: 991 --------------EQWPCRFYHVLKSCNKGSSCKYSH 1014
>gi|51535575|dbj|BAD37519.1| zinc finger (CCCH-type) protein-like [Oryza sativa Japonica Group]
Length = 2068
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC ++C+ H LPER PDC Y+L+ G C C Y H K N
Sbjct: 1869 GLCS-NTSCKLTHKV-----------LPER--MPDCSYFLR-GLC-TNIACPYRHVK-VN 1911
Query: 120 GAGPVSFNIL-GLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
PV + L G DE CP + TG C G CK HHP+
Sbjct: 1912 LNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQGSRCKLHHPK 1960
>gi|403338887|gb|EJY68686.1| Protein CPSF-4 [Oxytricha trifallax]
Length = 373
Score = 45.1 bits (105), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 12/117 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSA------ASNIGPLGLPSRPGQAICSNY 305
P CRY++ G C G C F H P+E+ + +G + + IC NY
Sbjct: 59 PPCRYFIQDGVCSKGDKCVFRHVIPQEKRTEDCPYYERGFCRMGLFCTFNHIHKKICENY 118
Query: 306 SMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSIL--DSSLMNHQAISATHSIETSP 360
MYG C GP C +H + N +L L+ + + + A+ ATH + P
Sbjct: 119 -MYGFCPKGPDCEKEHIKSVIADN-DTTLKILANFPDNENWADKSALQATHQQQQQP 173
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 37/101 (36%), Gaps = 29/101 (28%)
Query: 59 TGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR 118
G C NC F H + P C Y+++ G C G C + H
Sbjct: 38 VGRCKMEENCPFLHVMV-------------EDKIPPCRYFIQDGVCSKGDKCVFRHV--- 81
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+P + + CPYY R G C+ G+ C F+H
Sbjct: 82 ------------IPQEKRTEDCPYYER-GFCRMGLFCTFNH 109
>gi|307106713|gb|EFN54958.1| hypothetical protein CHLNCDRAFT_134725 [Chlorella variabilis]
Length = 325
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 33/63 (52%), Gaps = 8/63 (12%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
DC F+ R G CG GS C F H G +R++ GQ DC ++L+ G C GS C
Sbjct: 8 DCQFFLR-GSCGKGSLCPFRHDPSKITG--FRQQ----QGQQDCLFFLQ-GRCTKGSLCP 59
Query: 112 YHH 114
Y H
Sbjct: 60 YRH 62
>gi|308801741|ref|XP_003078184.1| CCCH-type Zn-finger protein (ISS) [Ostreococcus tauri]
gi|116056635|emb|CAL52924.1| CCCH-type Zn-finger protein (ISS) [Ostreococcus tauri]
Length = 276
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTC+YG+ C+F H ++ + P+ + +C ++ G C +G
Sbjct: 113 CRSWEESGTCRYGSKCQFAHGRD--------ELRPVLRHPKYKTEVCRTFAAQGSCPYGS 164
Query: 316 TCRFDH 321
CRF H
Sbjct: 165 RCRFIH 170
Score = 44.7 bits (104), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 61/138 (44%), Gaps = 27/138 (19%)
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDE 137
Q + Y+ EL C + ++GTC+YGS C++ H +D +L P + E
Sbjct: 104 QHSLYKTEL--------CRSWEESGTCRYGSKCQFAHGRDELRP------VLRHPKYKTE 149
Query: 138 KSCPYYMRTGSCKFGVACKF-HHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIV 196
C + GSC +G C+F H+ P GT +T +L ++ S P++
Sbjct: 150 V-CRTFAAQGSCPYGSRCRFIHYRAPEVEGTT--VTHRTALSALMSGKSPNAHTA----- 201
Query: 197 PAPGW-NTYMGNIGPLSP 213
W +T++ PL P
Sbjct: 202 ---DWSDTFLATPAPLDP 216
>gi|156344584|ref|XP_001621239.1| hypothetical protein NEMVEDRAFT_v1g222211 [Nematostella vectensis]
gi|156206977|gb|EDO29139.1| predicted protein [Nematostella vectensis]
Length = 220
Score = 45.1 bits (105), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
++ P + D +C +Y++TGSC+FG C HP+P S T L
Sbjct: 153 EVIAWPWKVDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLL 195
>gi|308502528|ref|XP_003113448.1| CRE-MEX-1 protein [Caenorhabditis remanei]
gi|308263407|gb|EFP07360.1| CRE-MEX-1 protein [Caenorhabditis remanei]
Length = 518
Score = 45.1 bits (105), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 20/82 (24%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP-GQA-------ICSNYSM 307
C Y G+C YG C+F H + L +PS+P G+A +C +S
Sbjct: 169 CDAYKRNGSCPYGEACRFAHGE-----------NELRMPSQPRGKAHPKYKTQLCDKFST 217
Query: 308 YGICKFGPTCRFDHPY-AGYPI 328
YG C +GP C+F H G P+
Sbjct: 218 YGQCPYGPRCQFIHKLKKGLPL 239
>gi|358054521|dbj|GAA99447.1| hypothetical protein E5Q_06146 [Mixia osmundae IAM 14324]
Length = 562
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 28/64 (43%), Gaps = 13/64 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C FYR G C G C F+H L E +P C YY+K TCK+G C
Sbjct: 81 CRFYR-AGACSAGDKCSFSH------------SLVESGTKPICQYYIKGDTCKFGHKCAN 127
Query: 113 HHPK 116
H K
Sbjct: 128 LHIK 131
>gi|255725390|ref|XP_002547624.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135515|gb|EER35069.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 254
Score = 45.1 bits (105), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG C YG+ C+F H + + P S+P C+N+S YG C++G
Sbjct: 195 CASFMKTGVCPYGSKCQFAHGENELKHVDR----PPKWRSKP----CANWSKYGSCRYGN 246
Query: 316 TCRFDH 321
C F H
Sbjct: 247 RCCFKH 252
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++KTG C YGS C++ H G + P + K C + + GSC++G
Sbjct: 195 CASFMKTGVCPYGSKCQFAH-------GENELKHVDRPPKWRSKPCANWSKYGSCRYGNR 247
Query: 155 CKFHH 159
C F H
Sbjct: 248 CCFKH 252
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C YGS C+F A+ ++ + P+ +P C + K G+C+YG+ C +
Sbjct: 195 CASFMKTGVCPYGSKCQF---AHGENELKHVDRPPKWRSKP-CANWSKYGSCRYGNRCCF 250
Query: 113 HH 114
H
Sbjct: 251 KH 252
>gi|118344188|ref|NP_001071917.1| zinc finger protein [Ciona intestinalis]
gi|92081526|dbj|BAE93310.1| zinc finger protein [Ciona intestinalis]
Length = 335
Score = 45.1 bits (105), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/119 (23%), Positives = 43/119 (36%), Gaps = 24/119 (20%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
+S + +P C Y G C YG C F H + + L C +
Sbjct: 189 SSKFKTKP----CTTYYTIGTCPYGDKCNFYHTEDEKNSTRVKTRL--------CKSWNS 236
Query: 101 TGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+G C+YG C + H + L ++ + C + TG C +G C F H
Sbjct: 237 SGACEYGERCDFAHGSEE------------LVVKYKTRMCKIFQATGRCPYGTQCTFAH 283
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 39/107 (36%), Gaps = 16/107 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +G C YG C F H + EEL + C + TG C YG+ C +
Sbjct: 231 CKSWNSSGACEYGERCDFAHGS---------EELVVKYKTRMCKIFQATGRCPYGTQCTF 281
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
H + + M C ++ C FG AC F H
Sbjct: 282 AHYEREKRKDISTVYKFKTEM------CQLWL-NNKCVFGAACHFAH 321
>gi|350423562|ref|XP_003493520.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Bombus impatiens]
Length = 420
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N G C+ G +C++ H + I PS IC + +GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGVWNDGNNETIISSSAPSMNN--IC-RFFKHGICKFGN 66
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 371
C F H + N + S+ +SS H + IS + +I+ + D WV+
Sbjct: 67 HCYFRHTTESFDNNV---VNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEWVK 120
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 71/186 (38%), Gaps = 15/186 (8%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
Y K G C+ G+ C+Y H + G + I+ C ++ + G CKFG C F
Sbjct: 13 YFKNGMCREGNNCRYRHTQGVWNDGN-NETIISSSAPSMNNICRFF-KHGICKFGNHCYF 70
Query: 158 HHPQPSSLGTALPLTG--NASLGSMGSSVLPSSGLQYA--GIVPAPGWNTYMGNIGPLSP 213
H S + N+S G S++ S+ ++ A I A W P
Sbjct: 71 RHTTESFDNNVVNANSVENSSAGQHTSNISTSTTIKIAKDNIRNAEEW----VKAPEFVP 126
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQN----LPERPDQPDCRYYMNTGTCKYGA 269
+ +AGS+ + + M I A + N +P C Y TG CK
Sbjct: 127 SHVAGSSSTNEASTISGTSTNSSMSISYAQAVNSSDQASSPSSEPLCPYAEATGICK-KR 185
Query: 270 DCKFHH 275
+C + H
Sbjct: 186 NCTYLH 191
>gi|307186056|gb|EFN71788.1| Makorin-1 [Camponotus floridanus]
Length = 418
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSR-PGQAICSNYSMYGICKFG 314
CRY+ N G C+ G +C++ H + + ++ A+ + P+ PG + + GICKFG
Sbjct: 11 CRYFKN-GACREGNNCRYRHAQ--VNRNDANINETVTTPTNSPGYIVTCRFFKQGICKFG 67
Query: 315 PTCRFDH 321
CRF H
Sbjct: 68 NQCRFSH 74
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 7/64 (10%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY-----YLKTGTCKYGSTC 110
Y + G C G+NCR+ H A E + P GY + K G CK+G+ C
Sbjct: 13 YFKNGACREGNNCRYRHAQVNRNDANINETVTTPTNSP--GYIVTCRFFKQGICKFGNQC 70
Query: 111 KYHH 114
++ H
Sbjct: 71 RFSH 74
>gi|341875115|gb|EGT31050.1| hypothetical protein CAEBREN_24850 [Caenorhabditis brenneri]
Length = 265
Score = 44.7 bits (104), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q + +ANQ D++ E + R K D+ + C Y+R
Sbjct: 69 QAARSTLANQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 30/112 (26%)
Query: 83 REELPERNGQPD------CGYYLKTGTCKYGSTCKY----------HHPKDRNGAGPVSF 126
REEL + + D C Y + TC YG C++ HP+ RN P
Sbjct: 88 REELMRQKRKDDAFKTALCDSYKRNQTCSYGEQCRFAHGVHELRLPQHPRGRNH--PKYK 145
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGNAS 176
+L C + TG+CK+G C+F H P+ L A + N +
Sbjct: 146 TVL----------CDKFSTTGNCKYGTRCQFIHKLANPTLLAQASGMLNNTA 187
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 29/77 (37%), Gaps = 19/77 (24%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 308 YGICKFGPTCRFDHPYA 324
G CK+G C+F H A
Sbjct: 155 TGNCKYGTRCQFIHKLA 171
>gi|392571211|gb|EIW64383.1| hypothetical protein TRAVEDRAFT_158581 [Trametes versicolor
FP-101664 SS1]
Length = 280
Score = 44.7 bits (104), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 117 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPTCPRKHVRRVACQLYLTG 176
Query: 310 ICKFGPTCRFDHPYAGYP 327
C GP C HP G P
Sbjct: 177 FCPLGPDCPRGHPKPGIP 194
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 97 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERR 143
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQP 162
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 144 VECPDYNRGFCKLGPTCPRKHVRRVACQLYL-TGFCPLGPDCPRGHPKP 191
>gi|168062631|ref|XP_001783282.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665200|gb|EDQ51892.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 335
Score = 44.7 bits (104), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG C+Y A C+F H + ++ P+ + +C +Y+ G+C +G
Sbjct: 197 CRSWEETGHCRYAAKCQFAHGND--------DLRPVPRHPKYKTELCRSYTETGLCSYGK 248
Query: 316 TCRFDH 321
CRF H
Sbjct: 249 RCRFIH 254
>gi|432892293|ref|XP_004075749.1| PREDICTED: uncharacterized protein LOC101175179 [Oryzias latipes]
Length = 412
Score = 44.7 bits (104), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNY 305
P R CR + TG+CKYG+ C+F H + + GL P C +
Sbjct: 145 PNRYKTELCRGFQETGSCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTF 194
Query: 306 SMYGICKFGPTCRFDH--PYAGYPIN 329
+G C +GP C F H AG P++
Sbjct: 195 YNFGYCPYGPRCHFIHEEKIAGAPLS 220
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Query: 39 AQASPY--PARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCG 96
AQ P P R C ++ TG C YGS C+F H +G YR P+ +P C
Sbjct: 137 AQVQPMLSPNRYKTELCRGFQETGSCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CR 192
Query: 97 YYLKTGTCKYGSTCKYHHPKDRNGA 121
+ G C YG C + H + GA
Sbjct: 193 TFYNFGYCPYGPRCHFIHEEKIAGA 217
>gi|292623933|ref|XP_002665468.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Danio
rerio]
Length = 361
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 35/83 (42%), Gaps = 12/83 (14%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 300
++SS + R CR + +GTCKYGA C+F H E + GL P
Sbjct: 133 TSSSAPMSTRYKTELCRTFEESGTCKYGAKCQFAHGMEELR----------GLNRHPKYK 182
Query: 301 I--CSNYSMYGICKFGPTCRFDH 321
C + G C +G C F H
Sbjct: 183 TEPCRTFHTIGFCPYGARCHFIH 205
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 33/77 (42%), Gaps = 4/77 (5%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+ ++P R C + +G C YG+ C+F H +G P+ +P C
Sbjct: 133 TSSSAPMSTRYKTELCRTFEESGTCKYGAKCQFAHGMEELRGLNRH---PKYKTEP-CRT 188
Query: 98 YLKTGTCKYGSTCKYHH 114
+ G C YG+ C + H
Sbjct: 189 FHTIGFCPYGARCHFIH 205
>gi|341904659|gb|EGT60492.1| hypothetical protein CAEBREN_18470 [Caenorhabditis brenneri]
Length = 265
Score = 44.7 bits (104), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q + +ANQ D++ E + R K D+ + C Y+R
Sbjct: 69 QAARSTLANQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKYG+ C++ H
Sbjct: 115 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQFIH 168
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 30/112 (26%)
Query: 83 REELPERNGQPD------CGYYLKTGTCKYGSTCKY----------HHPKDRNGAGPVSF 126
REEL + + D C Y + TC YG C++ HP+ RN P
Sbjct: 88 REELMRQKRKDDAFKTALCDSYKRNQTCSYGEQCRFAHGVHELRLPQHPRGRNH--PKYK 145
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGNAS 176
+L C + TG+CK+G C+F H P+ L A + N +
Sbjct: 146 TVL----------CDKFSTTGNCKYGTRCQFIHKLVNPTLLAQASGMLNNTA 187
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 19/74 (25%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 308 YGICKFGPTCRFDH 321
G CK+G C+F H
Sbjct: 155 TGNCKYGTRCQFIH 168
>gi|453087467|gb|EMF15508.1| hypothetical protein SEPMUDRAFT_123789 [Mycosphaerella populorum
SO2202]
Length = 1206
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 52/124 (41%), Gaps = 21/124 (16%)
Query: 256 CRYYMNTGTCKYGA-DCKFHHPKERIAQSAASNIG-----PLGLPS-----RPGQAICSN 304
CR++ GTCK+ A +C F H A A+ IG L LP PGQ C
Sbjct: 471 CRFW-REGTCKHSAQNCSFAH---SFAAGDATKIGGEYASKLRLPPPDERYDPGQLRCHF 526
Query: 305 YSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASS 364
+ +GICK G C++ H Y PP + + Q + A ++ P +
Sbjct: 527 FRTHGICKRGAVCKYAHHDTPY------DAPPPGVTVEDVRASQLVYAQSTMSRDPQKTR 580
Query: 365 KIPN 368
K P+
Sbjct: 581 KRPD 584
>gi|218198613|gb|EEC81040.1| hypothetical protein OsI_23831 [Oryza sativa Indica Group]
Length = 632
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 46/109 (42%), Gaps = 24/109 (22%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC ++C+ H LPER PDC Y+L+ G C C Y H K N
Sbjct: 433 GLCS-NTSCKLTHKV-----------LPER--MPDCSYFLR-GLC-TNIACPYRHVK-VN 475
Query: 120 GAGPVSFNIL-GLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
PV + L G DE CP + TG C G CK HHP+
Sbjct: 476 LNAPVCEDFLKGYCAYGDECHKKHSYVCPVFEATGECPQGSRCKLHHPK 524
>gi|163915111|ref|NP_001106542.1| ZFP36 ring finger protein [Xenopus (Silurana) tropicalis]
gi|159155749|gb|AAI54919.1| zfp36 protein [Xenopus (Silurana) tropicalis]
Length = 313
Score = 44.7 bits (104), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG CKYGA C+F H K + + N P + +C + +YG C +G
Sbjct: 109 CRTFSETGICKYGAKCQFAHGKIELRE---PNRHP-----KYKTELCHKFYLYGECPYGS 160
Query: 316 TCRFDH 321
C F H
Sbjct: 161 RCNFIH 166
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 42/92 (45%), Gaps = 18/92 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C + TG+C YG+ C+F H + EL E N P C + G C YG
Sbjct: 109 CRTFSETGICKYGAKCQFAHG---------KIELREPNRHPKYKTELCHKFYLYGECPYG 159
Query: 108 STCKY-HHPKDRNGAGPV---SFNILGLPMRQ 135
S C + HHP ++ + V S + G+P ++
Sbjct: 160 SRCNFIHHPSEQGTSQHVLRQSLSYSGVPSKR 191
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 16/96 (16%)
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
PA A +Y+ EL C + +TG CKYG+ C++ H G +
Sbjct: 95 PALPAPSPRYKTEL--------CRTFSETGICKYGAKCQFAH-------GKIELREPNRH 139
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA 168
+ + C + G C +G C F H PS GT+
Sbjct: 140 PKYKTELCHKFYLYGECPYGSRCNFIH-HPSEQGTS 174
>gi|395334665|gb|EJF67041.1| hypothetical protein DICSQDRAFT_96073 [Dichomitus squalens LYAD-421
SS1]
Length = 283
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 118 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYNRGFCRLGPNCPRKHVRRVACQLYLTG 177
Query: 310 ICKFGPTCRFDHPYAGYP 327
C GP C HP G P
Sbjct: 178 FCPLGPDCPRGHPKPGIP 195
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 98 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERK 144
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQP 162
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 145 VECPDYNRGFCRLGPNCPRKHVRRVACQLYL-TGFCPLGPDCPRGHPKP 192
>gi|448097279|ref|XP_004198630.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
gi|359380052|emb|CCE82293.1| Piso0_002013 [Millerozyma farinosa CBS 7064]
Length = 328
Score = 44.7 bits (104), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +TG+C YGS C+F H ++ + P +P C + K G+C+YGS C +
Sbjct: 269 CASYVKTGVCPYGSKCQFAH---GESELKHVDRPPNWRSKP-CANWSKFGSCRYGSRCCF 324
Query: 113 HH 114
H
Sbjct: 325 KH 326
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
Y+ EL C Y+KTG C YGS C++ H G + P K C
Sbjct: 264 YKTEL--------CASYVKTGVCPYGSKCQFAH-------GESELKHVDRPPNWRSKPCA 308
Query: 142 YYMRTGSCKFGVACKFHH 159
+ + GSC++G C F H
Sbjct: 309 NWSKFGSCRYGSRCCFKH 326
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C Y+ TG C YG+ C+F H + + P S+P C+N+S +G C++G
Sbjct: 269 CASYVKTGVCPYGSKCQFAHGESELKHVDR----PPNWRSKP----CANWSKFGSCRYGS 320
Query: 316 TCRFDH 321
C F H
Sbjct: 321 RCCFKH 326
>gi|414879023|tpg|DAA56154.1| TPA: hypothetical protein ZEAMMB73_608000 [Zea mays]
Length = 71
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 298 GQAICSNYSMYGICKFGPTCRFDHPYAGYPINY 330
G+ +C YS YGICKFG C+FDHP P+ Y
Sbjct: 5 GEELCKFYSRYGICKFGANCKFDHPTVVAPMVY 37
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 20/29 (68%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
GE C FY R G+C +G+NC+F+HP A
Sbjct: 5 GEELCKFYSRYGICKFGANCKFDHPTVVA 33
>gi|413954696|gb|AFW87345.1| hypothetical protein ZEAMMB73_473743 [Zea mays]
Length = 1192
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC ++C+ H LPER PDC Y+L+ G C + C Y H K N
Sbjct: 994 GLCS-STSCKLTHKV-----------LPER--MPDCSYFLQ-GLCT-NTACPYRHVK-VN 1036
Query: 120 GAGPVSFNIL------GLPMRQDEK-SCPYYMRTGSCKFGVACKFHHP 160
PV + L G R+ C + TG C G CK HHP
Sbjct: 1037 SNAPVCEDFLKGYCADGDECRKKHSYVCLVFEATGECPQGSRCKLHHP 1084
>gi|241733215|ref|XP_002412317.1| hypothetical protein IscW_ISCW021372 [Ixodes scapularis]
gi|215505564|gb|EEC15058.1| hypothetical protein IscW_ISCW021372 [Ixodes scapularis]
Length = 382
Score = 44.7 bits (104), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS-------AASNIGPLGLPS--RPGQAI 301
P QP CR++ N G C+Y C++ H + A ++ PS P + +
Sbjct: 69 PSQP-CRFFANHGHCRYRDRCRYSHGDVGVVSDHLDAETPEAEDVAKQKKPSSGEPTE-V 126
Query: 302 CSNYSMYGICKFGPTCRFDH 321
C Y G C+FG +CRF H
Sbjct: 127 CRFYERTGYCRFGRSCRFVH 146
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 41/95 (43%), Gaps = 16/95 (16%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE--- 88
+ G G A P++P C F+ G C Y CR++H E PE
Sbjct: 56 TRRGRGKAVPVSTPSQP----CRFFANHGHCRYRDRCRYSHGDVGVVSDHLDAETPEAED 111
Query: 89 -------RNGQPD--CGYYLKTGTCKYGSTCKYHH 114
+G+P C +Y +TG C++G +C++ H
Sbjct: 112 VAKQKKPSSGEPTEVCRFYERTGYCRFGRSCRFVH 146
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 41/96 (42%), Gaps = 18/96 (18%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI-LGLPMRQD------------EKSCP 141
C ++ G C+Y C+Y H G VS ++ P +D + C
Sbjct: 73 CRFFANHGHCRYRDRCRYSH----GDVGVVSDHLDAETPEAEDVAKQKKPSSGEPTEVCR 128
Query: 142 YYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL 177
+Y RTG C+FG +C+F H +P S G +L
Sbjct: 129 FYERTGYCRFGRSCRFVH-RPRSKAKNARRVGKTAL 163
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
CR+Y TG C++G C+F H + R A +G L +P Q SN
Sbjct: 127 CRFYERTGYCRFGRSCRFVH-RPRSKAKNARRVGKTALNCQPNQVADSN 174
>gi|391332409|ref|XP_003740627.1| PREDICTED: uncharacterized protein LOC100904311 [Metaseiulus
occidentalis]
Length = 623
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 47/120 (39%), Gaps = 31/120 (25%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAA-------QGAQYREELP-----ERNGQPDCGYYL 99
DC+F+ R G C G NC+F H +G E+ P E++ P C Y+
Sbjct: 455 DCIFFIRFGKCHKGDNCKFQHDLKKVSICTKFLRGTCKAEKCPFSHEVEKDKMPLCSYFQ 514
Query: 100 KTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+ G CK S C Y H R+D C ++R G C+ G C H
Sbjct: 515 R-GLCK-ASDCPYRHSY----------------FRKDIPHCENFLR-GFCELGQQCPKQH 555
>gi|260949487|ref|XP_002619040.1| hypothetical protein CLUG_00199 [Clavispora lusitaniae ATCC 42720]
gi|238846612|gb|EEQ36076.1| hypothetical protein CLUG_00199 [Clavispora lusitaniae ATCC 42720]
Length = 235
Score = 44.7 bits (104), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C YM G C YGA C+F H + + S P S+P CSN++ YG C++G
Sbjct: 176 CVSYMKMGGCPYGAKCQFAHGEHDLK----SVPRPANYRSKP----CSNWAKYGSCRYGK 227
Query: 316 TCRFDH 321
C F H
Sbjct: 228 RCCFKH 233
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+K G C YG+ C++ H G + P K C + + GSC++G
Sbjct: 176 CVSYMKMGGCPYGAKCQFAH-------GEHDLKSVPRPANYRSKPCSNWAKYGSCRYGKR 228
Query: 155 CKFHH 159
C F H
Sbjct: 229 CCFKH 233
>gi|443685968|gb|ELT89404.1| hypothetical protein CAPTEDRAFT_193102 [Capitella teleta]
Length = 270
Score = 44.7 bits (104), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 73/191 (38%), Gaps = 32/191 (16%)
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTA-LPLTGNASLG--SMGSSVLPSSGL 190
R D ++C ++ + CKFG +C F H G+A LP G S + L
Sbjct: 108 RNDTEACRFFAKYDWCKFGDSCHFSHANLD--GSADLPYQEQDLFDPEFFGFSEDDYTEL 165
Query: 191 QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPER 250
G P WN +L+ + + G + S+ + ++
Sbjct: 166 LSQGFQP---WND--------------DHDLMTRALSVLHSGEDYDDDVYSSVGPSPAKK 208
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 310
P C ++ + G CKYGADC F H + A+ P R + I + +
Sbjct: 209 P----CFFFQDHGYCKYGADCCFSH---DVPTGGATYTSP---QQRNTKDIPCRFFLNDS 258
Query: 311 CKFGPTCRFDH 321
C++G CRF H
Sbjct: 259 CRYGDQCRFSH 269
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 14 NQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHP 73
N D + A+ L ++ + + P PA+ C F++ G C YG++C F+H
Sbjct: 174 NDDHDLMTRALSVLHSGEDYDDDVYSSVGPSPAKKP---CFFFQDHGYCKYGADCCFSHD 230
Query: 74 AYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYHH 114
GA Y P++ D C ++L +C+YG C++ H
Sbjct: 231 V-PTGGATYTS--PQQRNTKDIPCRFFL-NDSCRYGDQCRFSH 269
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 65/199 (32%), Gaps = 68/199 (34%)
Query: 19 NIEEAIWRLK---IHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH--- 72
++E IWRL I +++ G+ AR C F+ + C +G +C F+H
Sbjct: 81 ELKELIWRLLTDFIRVSKQNSGLISI----ARNDTEACRFFAKYDWCKFGDSCHFSHANL 136
Query: 73 ---------------PAYAAQGAQYREELPERNGQP------------------------ 93
P + EL + QP
Sbjct: 137 DGSADLPYQEQDLFDPEFFGFSEDDYTELLSQGFQPWNDDHDLMTRALSVLHSGEDYDDD 196
Query: 94 ------------DCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
C ++ G CKYG+ C + H GA S P +++ K P
Sbjct: 197 VYSSVGPSPAKKPCFFFQDHGYCKYGADCCFSHDVPTGGATYTS------PQQRNTKDIP 250
Query: 142 -YYMRTGSCKFGVACKFHH 159
+ SC++G C+F H
Sbjct: 251 CRFFLNDSCRYGDQCRFSH 269
>gi|402584002|gb|EJW77944.1| hypothetical protein WUBG_11146, partial [Wuchereria bancrofti]
Length = 184
Score = 44.7 bits (104), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 40/181 (22%), Positives = 73/181 (40%), Gaps = 33/181 (18%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y++ C+ G++C + H DRN + +++C YY+ G C FG +
Sbjct: 11 CRYFVN-NICREGASCPFSH--DRNS--------------KPDRTCRYYL-IGKCAFGTS 52
Query: 155 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPT 214
C++ H +P G + + + G+ ++ + +G + +V ++ + T
Sbjct: 53 CRYDHKRPPLDGVKAVKSVSRTTGTPNATKVVENGCSSSEVVTTAATVNRSSHVFSVDAT 112
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
S A A + +A+S +L P P Y TG C G C+F
Sbjct: 113 EFIPS-----------WKALALSEVNTAASGSLGSLPLCP----YFETGDCDKGDKCQFV 157
Query: 275 H 275
H
Sbjct: 158 H 158
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 50/122 (40%), Gaps = 37/122 (30%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY++N C+ GA C F H + S+P + Y + G C FG
Sbjct: 11 CRYFVN-NICREGASCPFSHDRN----------------SKPDRTC--RYYLIGKCAFGT 51
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQNSDA 375
+CR+DH PPL + +A+ + +P+A+ + N +S+
Sbjct: 52 SCRYDHKR-----------PPLDGV-------KAVKSVSRTTGTPNATKVVENGCSSSEV 93
Query: 376 VS 377
V+
Sbjct: 94 VT 95
>gi|168061106|ref|XP_001782532.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666017|gb|EDQ52684.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 158
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 61/161 (37%), Gaps = 23/161 (14%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAG 194
QD+++CP+Y++TG C+FGV C HP A L + G ++ L+Y
Sbjct: 1 QDKRNCPFYIKTGVCRFGVRCSRLHP---VFNEACTLLMRSMYTGAGLALEQVESLEYTD 57
Query: 195 IVPAPGWNTYMGNI-------GPL---------SPTSIAGSNLIYSSRNQGDLGAGAQMH 238
A + + ++ G L SP + Y+S+ L
Sbjct: 58 EEVAQEYEEFYDDVHSEFIQFGELVNFKVCRNGSPHLRGNVYVHYASQESAMLAYNHMNG 117
Query: 239 ILSASSQNLPER----PDQPDCRYYMNTGTCKYGADCKFHH 275
A Q + R D C ++ TC +G+ C F H
Sbjct: 118 RFYAKKQVVLPRGWKICDILACCFWSTVQTCSHGSACNFMH 158
>gi|52548270|gb|AAU82119.1| POS-1 [Caenorhabditis remanei]
Length = 261
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 46/116 (39%), Gaps = 27/116 (23%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q NA+A+Q D++ E + R K D+ + C Y+R
Sbjct: 69 QAARNALASQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 114
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKY 112
C YG CRF H + + Q+ P P C + TG CKYG+ C++
Sbjct: 115 CSYGDQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYGTRCQF 166
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 30/112 (26%)
Query: 83 REELPERNGQPD------CGYYLKTGTCKYGSTCKY----------HHPKDRNGAGPVSF 126
REEL + + D C Y + TC YG C++ HP+ RN P
Sbjct: 88 REELMRQKRKDDAFKTALCDSYKRNQTCSYGDQCRFAHGVHELRLPQHPRGRN--HPKYK 145
Query: 127 NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGNAS 176
+L C + TG+CK+G C+F + P+ L A + N S
Sbjct: 146 TVL----------CDKFSTTGNCKYGTRCQFINKLVNPTLLAQASGMLNNTS 187
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 27/72 (37%), Gaps = 19/72 (26%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y TC YG C+F H + L LP P +C +S
Sbjct: 106 CDSYKRNQTCSYGDQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 154
Query: 308 YGICKFGPTCRF 319
G CK+G C+F
Sbjct: 155 TGNCKYGTRCQF 166
>gi|242210067|ref|XP_002470878.1| predicted protein [Postia placenta Mad-698-R]
gi|220730105|gb|EED83968.1| predicted protein [Postia placenta Mad-698-R]
Length = 213
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + PDC +Y K G C G C Y HPK+R
Sbjct: 87 GLCKKGDACEFLHEYNLRR-------------MPDCWWYAKYGYCSAGDECLYAHPKERR 133
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 134 IECPDYNRGFCKLGPDCPRKHIRRVACQLYL-TGFCPLGPDCPRGHPKPE 182
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 32/73 (43%), Gaps = 4/73 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
PDC +Y G C G +C + HPKER + N G L P + + + + G
Sbjct: 107 PDCWWYAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPDCPRKHIRRVACQLYLTG 166
Query: 310 ICKFGPTCRFDHP 322
C GP C HP
Sbjct: 167 FCPLGPDCPRGHP 179
>gi|402226360|gb|EJU06420.1| hypothetical protein DACRYDRAFT_113130 [Dacryopinax sp. DJM-731
SS1]
Length = 410
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 52/130 (40%), Gaps = 22/130 (16%)
Query: 43 PYPARPG--EPDCLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYRE------------ELP 87
P +PG + C F+ RTG+C G CR+ H P A ++ + P
Sbjct: 159 PSATKPGREKKQCPFFTRTGICTRGRTCRYQHDPEKVAMCPKWLKGDCPNGDSCPLSHQP 218
Query: 88 ERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV-SFNILGLPM------RQDEKSC 140
P C ++ G CK G +C Y H AG F +LG ++ + C
Sbjct: 219 TPQRMPFCVHFANAGRCKNGDSCMYPHVHLGATAGICRDFAVLGYCEKGADCDKKHVREC 278
Query: 141 PYYMRTGSCK 150
P + TG CK
Sbjct: 279 PDFADTGVCK 288
>gi|18858483|ref|NP_571014.1| cth1 [Danio rerio]
gi|5911474|emb|CAB55775.1| putative zinc finger protein [Danio rerio]
gi|79158856|gb|AAI07985.1| Cth1 [Danio rerio]
Length = 319
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 37/90 (41%), Gaps = 6/90 (6%)
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPS- 295
+H L P R + P CR + G C +G C F H + A PS
Sbjct: 121 VHNLKEQRPIRPRRRNVP-CRTFRAFGVCPFGNRCHFLHVEGGSESDGAEEEQTWQPPSQ 179
Query: 296 ----RPGQAICSNYSMYGICKFGPTCRFDH 321
+P A+C +S +G C +G CRF H
Sbjct: 180 SQEWKPRGALCRTFSAFGFCLYGTRCRFQH 209
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 46/119 (38%), Gaps = 12/119 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y G C YG+ C F H + R P R P C + G C +G+ C +
Sbjct: 103 CRTYHTAGYCVYGTRCLFVH-----NLKEQRPIRPRRRNVP-CRTFRAFGVCPFGNRCHF 156
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKS------CPYYMRTGSCKFGVACKFHHPQPSSL 165
H + + + P Q ++ C + G C +G C+F H P+++
Sbjct: 157 LHVEGGSESDGAEEEQTWQPPSQSQEWKPRGALCRTFSAFGFCLYGTRCRFQHGLPNTI 215
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C Y C+F H + ++ +Y+ EL C Y G C YG+
Sbjct: 65 CSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYKTEL--------CRTYHTAGYCVYGT 116
Query: 109 TCKY-HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
C + H+ K++ P N+ C + G C FG C F H
Sbjct: 117 RCLFVHNLKEQRPIRPRRRNV----------PCRTFRAFGVCPFGNRCHFLH 158
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 61/185 (32%), Gaps = 44/185 (23%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQ---DEKSCPYYMRTGSCKF 151
C Y +TGTCKY C++ H + L +P R + C Y G C +
Sbjct: 65 CSRYAETGTCKYAERCQFAH----------GLHDLHVPSRHPKYKTELCRTYHTAGYCVY 114
Query: 152 GVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPL 211
G C F H +L P+ +P + G+ P
Sbjct: 115 GTRCLFVH----NLKEQRPIRPR-------RRNVPCRTFRAFGVCP-------------- 149
Query: 212 SPTSIAGSNLIYSSRNQGDLGAGA-QMHILSASSQNLPERPDQPDCRYYMNTGTCKYGAD 270
G+ + G GA + SQ+ +P CR + G C YG
Sbjct: 150 -----FGNRCHFLHVEGGSESDGAEEEQTWQPPSQSQEWKPRGALCRTFSAFGFCLYGTR 204
Query: 271 CKFHH 275
C+F H
Sbjct: 205 CRFQH 209
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 65 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 113
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 114 YGTRCLFVH 122
>gi|354548255|emb|CCE44992.1| hypothetical protein CPAR2_407950 [Candida parapsilosis]
Length = 265
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 32/65 (49%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
CG ++KTG+C YG C++ H G + P + K C + + GSC++G
Sbjct: 206 CGPFMKTGSCPYGLKCQFAH-------GEAELKHIERPPKWRSKPCANWSKYGSCRYGNR 258
Query: 155 CKFHH 159
C F H
Sbjct: 259 CCFKH 263
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG+C YG C+F H + + + P + C+N+S YG C++G
Sbjct: 206 CGPFMKTGSCPYGLKCQFAH--------GEAELKHIERPPKWRSKPCANWSKYGSCRYGN 257
Query: 316 TCRFDH 321
C F H
Sbjct: 258 RCCFKH 263
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ +TG C YG C+F A+ ++ E P+ +P C + K G+C+YG+ C + H
Sbjct: 209 FMKTGSCPYGLKCQF---AHGEAELKHIERPPKWRSKP-CANWSKYGSCRYGNRCCFKH 263
>gi|349802739|gb|AEQ16842.1| hypothetical protein [Pipa carvalhoi]
Length = 174
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TGTCKYGA C+F H K + + N P + +C Y +YG C +G
Sbjct: 112 CRTFSETGTCKYGAKCQFAHGKTELRE---PNRHP-----KYKTELCHKY-LYGECPYGT 162
Query: 316 TCRFDH 321
C F H
Sbjct: 163 RCNFIH 168
>gi|406607221|emb|CCH41482.1| Chromodomain-helicase-DNA-binding protein [Wickerhamomyces
ciferrii]
Length = 503
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 15/78 (19%)
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
Y+ EL C + KTG+C YG+ C++ H G ++ + K C
Sbjct: 439 YKTEL--------CSTFNKTGSCPYGNKCQFAH-------GGNELKVVNRGSKYRSKPCA 483
Query: 142 YYMRTGSCKFGVACKFHH 159
+ +TGSC++G C F H
Sbjct: 484 NWSKTGSCRYGNRCCFKH 501
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 12/85 (14%)
Query: 34 EGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRF----NHPAYAAQGAQYREELPER 89
+GG QA+ C + +TG C YG+ C+F N +G++YR +
Sbjct: 425 QGGLDKQANVNTELYKTELCSTFNKTGSCPYGNKCQFAHGGNELKVVNRGSKYRSK---- 480
Query: 90 NGQPDCGYYLKTGTCKYGSTCKYHH 114
C + KTG+C+YG+ C + H
Sbjct: 481 ----PCANWSKTGSCRYGNRCCFKH 501
Score = 38.5 bits (88), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + TG+C YG C+F H + + + S+ C+N+S G C++G
Sbjct: 444 CSTFNKTGSCPYGNKCQFAH--------GGNELKVVNRGSKYRSKPCANWSKTGSCRYGN 495
Query: 316 TCRFDH 321
C F H
Sbjct: 496 RCCFKH 501
>gi|320581641|gb|EFW95860.1| Member of the CCCH zinc finger family [Ogataea parapolymorpha DL-1]
Length = 423
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTC 110
C ++ G C YG+ C+F H G + +++ N C +LK G+C+YG C
Sbjct: 358 CTQFQEKGSCPYGAKCQFAH------GEEELKKVKRANNWKTKLCANWLKAGSCRYGKRC 411
Query: 111 KYHHPKDRNGA 121
+ H +D G+
Sbjct: 412 CFKHGEDDRGS 422
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G+C YGA C+F H +E + + +N L C+N+ G C++G
Sbjct: 358 CTQFQEKGSCPYGAKCQFAHGEEELKKVKRANNWKTKL--------CANWLKAGSCRYGK 409
Query: 316 TCRFDH 321
C F H
Sbjct: 410 RCCFKH 415
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + + G+C YG+ C++ H G + K C +++ GSC++G
Sbjct: 358 CTQFQEKGSCPYGAKCQFAH-------GEEELKKVKRANNWKTKLCANWLKAGSCRYGKR 410
Query: 155 CKFHH 159
C F H
Sbjct: 411 CCFKH 415
>gi|301106366|ref|XP_002902266.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098886|gb|EEY56938.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 602
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 59/148 (39%), Gaps = 30/148 (20%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYRE-------ELPERN-- 90
QA+ + G C + R LC G NC F H ++ + R E P R+
Sbjct: 52 QAAKKDFKRGTVVCRHWLRA-LCMKGDNCEFLHQYDMSKMPECRWGMECQVPECPFRHVP 110
Query: 91 --GQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKS--------- 139
+ +C +Y K G C +GS+C+Y H K P + + DE++
Sbjct: 111 DEERVECAFY-KQGFCSHGSSCRYRHIKLAREECPETADFALQAKVADEENVKRRKAQPV 169
Query: 140 --------CPYYMRTGSCKFGVACKFHH 159
C ++ + GSC FG C F H
Sbjct: 170 NEFFKIAICKHWEKMGSCPFGDECHFAH 197
>gi|392597302|gb|EIW86624.1| hypothetical protein CONPUDRAFT_134023 [Coniophora puteana
RWD-64-598 SS2]
Length = 292
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 6/77 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 308
P+C +Y G C G +C + HPKER A+ +GP+ + C Y +
Sbjct: 119 PECWWYAKYGYCSAGDECLYAHPKERRAECPDYRRGFCKLGPMCPRKHVRRVACQAY-LT 177
Query: 309 GICKFGPTCRFDHPYAG 325
G+C GP C HP G
Sbjct: 178 GLCPLGPECPRGHPKPG 194
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 99 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERR 145
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQP 162
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 146 AECPDYRRGFCKLGPMCPRKHVRRVACQAYL-TGLCPLGPECPRGHPKP 193
>gi|219114573|ref|XP_002176455.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402559|gb|EEC42552.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 334
Score = 44.3 bits (103), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 41/109 (37%), Gaps = 8/109 (7%)
Query: 51 PDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTC 110
PD F C YG NC+F H G + +P + K G CK G TC
Sbjct: 123 PDICFLWIHKRCPYGENCKFVH---HGNGGVLDQRAVSAFPKPRKCWDFKKGKCKMGDTC 179
Query: 111 KYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+ H G P+S + EK C + G C+ G C + H
Sbjct: 180 PFSH----EGIEPISIK-EKIDRPSSEKDCINWKTKGKCRKGETCPYRH 223
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 3/79 (3%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDC 95
GGV A P C +++ G C G C F+H + +E++ + + DC
Sbjct: 148 GGVLDQRAVSAFPKPRKCWDFKK-GKCKMGDTCPFSHEGI--EPISIKEKIDRPSSEKDC 204
Query: 96 GYYLKTGTCKYGSTCKYHH 114
+ G C+ G TC Y H
Sbjct: 205 INWKTKGKCRKGETCPYRH 223
>gi|324518763|gb|ADY47198.1| Tristetraprolin, partial [Ascaris suum]
Length = 381
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +TG C YGA+C+F H + + + P P Q +C+ + G C +G
Sbjct: 167 CREFRDTGGCGYGAECRFAHGESEL------RLPPQAHPKYKTQ-LCNKFVWLGRCPYGS 219
Query: 316 TCRFDH 321
C+F H
Sbjct: 220 RCQFIH 225
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 22/92 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQ-----GAQYREELPERNGQPDCGYYLKTGTCKYG 107
C +R TG CGYG+ CRF H + +Y+ +L C ++ G C YG
Sbjct: 167 CREFRDTGGCGYGAECRFAHGESELRLPPQAHPKYKTQL--------CNKFVWLGRCPYG 218
Query: 108 STCKYHHPKDRNGAGPVSFNILGLPMRQDEKS 139
S C++ H + N L M+QD +S
Sbjct: 219 SRCQFIHRRP---------NELISDMQQDNRS 241
>gi|224073744|ref|XP_002304152.1| predicted protein [Populus trichocarpa]
gi|222841584|gb|EEE79131.1| predicted protein [Populus trichocarpa]
Length = 264
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 20/126 (15%)
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHP-----KERIAQ---SAASNIGPLGLPSRPGQA--- 300
D+ CR + + C YG C+F H ++ + Q S+A +IG G S G
Sbjct: 100 DKNLCRMFNSGKGCTYGNKCRFLHVVPENFQKNLGQNWESSAISIGTTGTASSGGHKKGY 159
Query: 301 ----ICSNYSMYGICKFGPTCRFDH-----PYAGYPINYGLSLPPLSILDSSLMNHQAIS 351
+C+N+ M G C +G C F H + I + P +S LM I
Sbjct: 160 KKTRLCNNWEMTGGCPYGKVCHFAHGQQELEKSDGSIALASGIVPTKASNSLLMGKDGIG 219
Query: 352 ATHSIE 357
+ H E
Sbjct: 220 SNHKHE 225
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 4/92 (4%)
Query: 99 LKTGTCKYGSTCKYHHPK-DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
+TG C +GS C + H D A P N+ + + +D+ C + C +G C+F
Sbjct: 65 FRTGHCSHGSKCLFAHAVCDLRKALP---NLRRVVVNEDKNLCRMFNSGKGCTYGNKCRF 121
Query: 158 HHPQPSSLGTALPLTGNASLGSMGSSVLPSSG 189
H P + L +S S+G++ SSG
Sbjct: 122 LHVVPENFQKNLGQNWESSAISIGTTGTASSG 153
>gi|146165384|ref|XP_001014899.2| hypothetical protein TTHERM_00052030 [Tetrahymena thermophila]
gi|146145562|gb|EAR94717.2| hypothetical protein TTHERM_00052030 [Tetrahymena thermophila
SB210]
Length = 212
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 7/76 (9%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+Y+ NTG C + C F H + + LP+ C N+ G C +G
Sbjct: 71 CKYWKNTGHCHFSDSCAFAHGYHEVREKTH-------LPNNYRTKKCKNFHEIGFCLYGE 123
Query: 316 TCRFDHPYAGYPINYG 331
C+F H P N+
Sbjct: 124 RCQFLHTVHKKPNNFA 139
>gi|330792528|ref|XP_003284340.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
gi|325085686|gb|EGC39088.1| hypothetical protein DICPUDRAFT_91287 [Dictyostelium purpureum]
Length = 442
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG C+YG C+F H K+ + P+ + C + G C +G
Sbjct: 197 CRSFAETGVCRYGLKCQFAHGKDELR--------PVMRHPKYKTEACKTFYSVGSCPYGA 248
Query: 316 TCRFDH 321
CRF H
Sbjct: 249 RCRFIH 254
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 15/79 (18%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+Y+ EL C + +TG C+YG C++ H KD PV + P + E +C
Sbjct: 191 RYKTEL--------CRSFAETGVCRYGLKCQFAHGKDE--LRPV----MRHPKYKTE-AC 235
Query: 141 PYYMRTGSCKFGVACKFHH 159
+ GSC +G C+F H
Sbjct: 236 KTFYSVGSCPYGARCRFIH 254
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG+C YG C+F H + +Y+ E C + G+C YG+
Sbjct: 197 CRSFAETGVCRYGLKCQFAHGKDELRPVMRHPKYKTEA--------CKTFYSVGSCPYGA 248
Query: 109 TCKYHHPKD 117
C++ H +D
Sbjct: 249 RCRFIHTRD 257
>gi|448524536|ref|XP_003871522.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis Co 90-125]
gi|380353344|emb|CCG26100.1| hypothetical protein CORT_0C07300 [Candida orthopsilosis]
Length = 293
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
CG ++KTG C YG C++ H G + P + K C + + GSC++G
Sbjct: 234 CGPFMKTGNCPYGHKCQFAH-------GQAELKHIERPPKWRSKPCANWAKYGSCRYGNR 286
Query: 155 CKFHH 159
C F H
Sbjct: 287 CCFKH 291
Score = 41.6 bits (96), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG C YG C+F H + + + P + C+N++ YG C++G
Sbjct: 234 CGPFMKTGNCPYGHKCQFAHGQAELKH--------IERPPKWRSKPCANWAKYGSCRYGN 285
Query: 316 TCRFDH 321
C F H
Sbjct: 286 RCCFKH 291
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ +TG C YG C+F A+ ++ E P+ +P C + K G+C+YG+ C + H
Sbjct: 237 FMKTGNCPYGHKCQF---AHGQAELKHIERPPKWRSKP-CANWAKYGSCRYGNRCCFKH 291
>gi|383851850|ref|XP_003701444.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Megachile rotundata]
Length = 417
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 62/132 (46%), Gaps = 20/132 (15%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N G C+ G++C++ H +E I +N + S P + + +G+CKFG
Sbjct: 11 CRYFKN-GICREGSNCRYRHTQE-IGNDGNTN--ETVISSVPSFSSVCRFFKHGVCKFGN 66
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPD--ASSKIPNWVQNS 373
C F H P + D++L+N ++ + S + + + AS+ I N +N+
Sbjct: 67 QCHFRHN------------PEID--DNNLVNANSVENSSSGQQTSNTSASTTIKNVKENA 112
Query: 374 DAVSVQHQNPDM 385
A + P+
Sbjct: 113 HAAEEWVKAPEF 124
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 74/192 (38%), Gaps = 27/192 (14%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNIL-GLPMRQDEKSCPYYMRTGSCKFGVACK 156
Y K G C+ GS C+Y H ++ G + ++ +P S + + G CKFG C
Sbjct: 13 YFKNGICREGSNCRYRHTQEIGNDGNTNETVISSVP---SFSSVCRFFKHGVCKFGNQCH 69
Query: 157 FHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIG------- 209
F H P + +L + S SSG Q + + N
Sbjct: 70 FRHN---------PEIDDNNLVNANSVENSSSGQQTSNTSASTTIKNVKENAHAAEEWVK 120
Query: 210 --PLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPD----QPDCRYYMNTG 263
P+S+AGS+ + N + A + + + A + N + +P C Y TG
Sbjct: 121 APEFVPSSVAGSSSADEASNTLETSASSSLPLSYAQALNPSGQASNPSLEPLCPYAEATG 180
Query: 264 TCKYGADCKFHH 275
C+ +C + H
Sbjct: 181 ICR-KRNCTYLH 191
>gi|225459673|ref|XP_002284626.1| PREDICTED: uncharacterized protein LOC100262507 [Vitis vinifera]
Length = 2260
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC NC+ H +PER PDC Y+L+ G C +C Y H
Sbjct: 2060 GLCS-NPNCKLTHKV-----------IPER--MPDCSYFLQ-GLCN-NESCPYRHVNVNP 2103
Query: 120 GAGPVSFNILGLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
A + G +E CP + TGSC G CK HHP+
Sbjct: 2104 NASVCEGFLRGYCADGNECRKKHSYVCPIFEATGSCPLGSKCKLHHPK 2151
>gi|302141758|emb|CBI18961.3| unnamed protein product [Vitis vinifera]
Length = 2149
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 43/108 (39%), Gaps = 22/108 (20%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC NC+ H +PER PDC Y+L+ G C +C Y H
Sbjct: 1949 GLCS-NPNCKLTHKV-----------IPER--MPDCSYFLQ-GLCN-NESCPYRHVNVNP 1992
Query: 120 GAGPVSFNILGLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
A + G +E CP + TGSC G CK HHP+
Sbjct: 1993 NASVCEGFLRGYCADGNECRKKHSYVCPIFEATGSCPLGSKCKLHHPK 2040
>gi|302782447|ref|XP_002972997.1| hypothetical protein SELMODRAFT_98008 [Selaginella moellendorffii]
gi|300159598|gb|EFJ26218.1| hypothetical protein SELMODRAFT_98008 [Selaginella moellendorffii]
Length = 878
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 15/69 (21%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
GE C+++RR G C G+ C F+H + C ++L C+YG+
Sbjct: 680 GEVQCVYFRR-GFCAKGNCCEFSHSVSSTPAV--------------CKFFLSGDGCRYGA 724
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 725 HCRYKHDSD 733
>gi|393910345|gb|EJD75831.1| hypothetical protein LOAG_17084 [Loa loa]
Length = 411
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 6/88 (6%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD---C 95
A+ SP P C + +G+C + NCRF A+ + + LP +N + C
Sbjct: 148 ARKSPKPDSYKTVMCQAWLESGICSFAENCRF---AHGDEELRPCNRLPTKNPKYKTKLC 204
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
Y G C YG C + HP N + P
Sbjct: 205 DKYTMAGLCPYGDRCLFIHPGVSNASNP 232
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ +G C + +C+F H E + N P P + +C Y+M G+C +G
Sbjct: 162 CQAWLESGICSFAENCRFAHGDEELR---PCNRLPTKNPKYKTK-LCDKYTMAGLCPYGD 217
Query: 316 TCRFDHP 322
C F HP
Sbjct: 218 RCLFIHP 224
>gi|41054479|ref|NP_955943.1| zinc finger protein 36, C3H type-like 1b [Danio rerio]
gi|39645454|gb|AAH63991.1| Zinc finger protein 36, C3H type-like 1 like [Danio rerio]
Length = 348
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 89/234 (38%), Gaps = 42/234 (17%)
Query: 3 DNRQVKSNAVANQSADNIEEAIWRLKIHDNQE-------------GGGVAQASPYPARPG 49
+N ++ ++A N S++N E +N E G G +S Y
Sbjct: 84 NNLKMDNSASINGSSNNKENRFRDRSFSENGERLRPSSITCISANGNGQVNSSRYKTELC 143
Query: 50 EPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCK 105
P + G C YG C+F H + + +Y+ EL C + G C
Sbjct: 144 RP----FEENGTCKYGDKCQFAHGMHELRSLNRHPKYKTEL--------CRTFHSIGYCP 191
Query: 106 YGSTCKY-HHPKDRNGAGPV-SFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPS 163
YG C + H+ ++R G P+ SFN + P S + +G + P+
Sbjct: 192 YGPRCHFIHNAEERRGPPPLSSFNKMERPRLHHSFSFAGFPSSGGSQ---------DSPT 242
Query: 164 SLGTALPLTGNASLGSMGSSVLPSSGLQYAGI-VPAPGWNTYMGNIGPLSPTSI 216
S+ T PL L S+ S + A + VP+ G T GP SPTS
Sbjct: 243 SV-TPPPLFSAEDLNEWSSNPFAFSSQELANLFVPSLGGTTIPDLPGPHSPTSF 295
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTCKYG C+F H + L + +C + G C +GP
Sbjct: 143 CRPFEENGTCKYGDKCQFAH--------GMHELRSLNRHPKYKTELCRTFHSIGYCPYGP 194
Query: 316 TCRFDH 321
C F H
Sbjct: 195 RCHFIH 200
>gi|348676825|gb|EGZ16642.1| hypothetical protein PHYSODRAFT_314356 [Phytophthora sojae]
Length = 494
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ C YG CRF H A + + EE P++ C ++ CKYG C +
Sbjct: 175 CKYFGTAMGCKYGDECRFTHDEAAVKAVEGGEEPPKKKVDIPCRFFNTPLGCKYGDDCSF 234
Query: 113 HHPK 116
H K
Sbjct: 235 IHEK 238
>gi|167386244|ref|XP_001737682.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899452|gb|EDR26041.1| hypothetical protein EDI_014210 [Entamoeba dispar SAW760]
Length = 222
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNH-------PAYAAQGAQYREELPERNGQPDCGYYLKT 101
G C+F+ + G C G +C F+H P++ Q ++ + + C Y+ +T
Sbjct: 137 GTKPCIFFMQNGYCKKGGSCTFSHDISSLNNPSFCQQNSKQFISVDKLYRTKPCKYFFET 196
Query: 102 GTCKYGSTCKYHH 114
G C+ G C + H
Sbjct: 197 GVCRKGEHCNFSH 209
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 43/102 (42%), Gaps = 16/102 (15%)
Query: 70 FNHPAYAAQGAQYREELPE------RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
F++P Y + E+P+ + G C ++++ G CK G +C + H D +
Sbjct: 112 FSNPFYFSMFNN--REIPDSPQKHLKYGTKPCIFFMQNGYCKKGGSCTFSH--DISSLNN 167
Query: 124 VSF------NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
SF + + K C Y+ TG C+ G C F H
Sbjct: 168 PSFCQQNSKQFISVDKLYRTKPCKYFFETGVCRKGEHCNFSH 209
>gi|116205852|ref|XP_001228735.1| hypothetical protein CHGG_02219 [Chaetomium globosum CBS 148.51]
gi|88182816|gb|EAQ90284.1| hypothetical protein CHGG_02219 [Chaetomium globosum CBS 148.51]
Length = 916
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 57/146 (39%), Gaps = 37/146 (25%)
Query: 47 RPGEPD----CLFYRRTGLCGYGSNCRFNHPAYAAQG-AQYREELPERNGQPDCGYYLKT 101
RPG+ C FY R GLC GS C+F H A AQ P +G+ C Y+
Sbjct: 8 RPGQTVRRVPCHFYAR-GLCLKGSGCQFTHEGQDAPSPAQ-----PSSSGKVRCQYF-AA 60
Query: 102 GTCKYGSTCKYHH---PKDRNGAGPV-----SFNILGLPMRQDE---------------- 137
G C G +C Y H P P+ L LPM Q
Sbjct: 61 GYCARGDSCFYAHEAPPTPTTWRDPLPPPLPMVQPLPLPMTQSLPVVQPTPQRPTNSRAL 120
Query: 138 KSCPYYMRTGSCKFGVACKFHHPQPS 163
+C ++ R G+CK G C F HP S
Sbjct: 121 AACKFFAR-GACKNGTVCPFAHPTAS 145
>gi|291238825|ref|XP_002739326.1| PREDICTED: Smad-interacting and CPSF-like protein-like
[Saccoglossus kowalevskii]
Length = 858
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 19/105 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+FY R G C G+ C + H P++ C +L+ GTCK G++C++
Sbjct: 629 CMFYNRFGKCNRGNKCPYIHD-------------PDKVAV--CTRFLR-GTCKDGASCQF 672
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
H ++ SF + G+ R D CPY S K V F
Sbjct: 673 SHKVSKDKMPVCSFFLRGVCNRDD---CPYLHVNVSRKAAVCQDF 714
>gi|312084674|ref|XP_003144371.1| see oma family member [Loa loa]
Length = 341
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Query: 39 AQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD---C 95
A+ SP P C + +G+C + NCRF H + + LP +N + C
Sbjct: 78 ARKSPKPDSYKTVMCQAWLESGICSFAENCRFAH---GDEELRPCNRLPTKNPKYKTKLC 134
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGP 123
Y G C YG C + HP N + P
Sbjct: 135 DKYTMAGLCPYGDRCLFIHPGVSNASNP 162
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ +G C + +C+F H E + N P P + +C Y+M G+C +G
Sbjct: 92 CQAWLESGICSFAENCRFAHGDEELR---PCNRLPTKNPKYKTK-LCDKYTMAGLCPYGD 147
Query: 316 TCRFDHP 322
C F HP
Sbjct: 148 RCLFIHP 154
>gi|110762396|ref|XP_001121248.1| PREDICTED: hypothetical protein LOC725393 [Apis mellifera]
Length = 401
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 85 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 136
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 137 RCHFIHNF 144
>gi|302805206|ref|XP_002984354.1| hypothetical protein SELMODRAFT_40615 [Selaginella moellendorffii]
gi|300147742|gb|EFJ14404.1| hypothetical protein SELMODRAFT_40615 [Selaginella moellendorffii]
Length = 913
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 16/69 (23%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G+ C+++RR G C G+ C F+H + P C ++L C+YG+
Sbjct: 676 GKVQCVYFRR-GSCAKGNGCEFSHSV---------------SSTPVCKFFLSGDGCRYGA 719
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 720 HCRYKHDSD 728
>gi|17533629|ref|NP_496795.1| Protein MOE-3 [Caenorhabditis elegans]
gi|3876591|emb|CAB04229.1| Protein MOE-3 [Caenorhabditis elegans]
Length = 367
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 33/71 (46%), Gaps = 12/71 (16%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA----ICSNYSMYGIC 311
C+ ++ + TC + +C+F H +E + P L SR +C Y+ G+C
Sbjct: 136 CQAWLESKTCTFAENCRFAHGEEELR--------PAKLESRQNNKYKTKLCDKYTTTGLC 187
Query: 312 KFGPTCRFDHP 322
+G C F HP
Sbjct: 188 PYGKRCLFIHP 198
Score = 41.2 bits (95), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + C + NCRF H + A+ + C Y TG C YG C +
Sbjct: 136 CQAWLESKTCTFAENCRFAHGEEELRPAKLESRQNNKYKTKLCDKYTTTGLCPYGKRCLF 195
Query: 113 HHPKDRNGA 121
HP ++ A
Sbjct: 196 IHPDNQPNA 204
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 34/84 (40%), Gaps = 11/84 (13%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK-- 138
+ R + PE C +L++ TC + C++ H G L RQ+ K
Sbjct: 122 ERRMQKPESYKTVICQAWLESKTCTFAENCRFAH-------GEEELRPAKLESRQNNKYK 174
Query: 139 --SCPYYMRTGSCKFGVACKFHHP 160
C Y TG C +G C F HP
Sbjct: 175 TKLCDKYTTTGLCPYGKRCLFIHP 198
>gi|350422621|ref|XP_003493231.1| PREDICTED: hypothetical protein LOC100743445 [Bombus impatiens]
Length = 351
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 86 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 137
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 138 RCHFIHNF 145
>gi|344302417|gb|EGW32691.1| hypothetical protein SPAPADRAFT_60049 [Spathaspora passalidarum
NRRL Y-27907]
Length = 353
Score = 43.9 bits (102), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 15/78 (19%)
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
Y+ EL C ++K G C YG+ C++ H G ++ P + K C
Sbjct: 289 YKTEL--------CASFMKMGICPYGNKCQFAH-------GENELKVVERPPKWRSKPCV 333
Query: 142 YYMRTGSCKFGVACKFHH 159
+ + GSC++G C F H
Sbjct: 334 NWAKYGSCRYGNRCCFKH 351
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + G+C YG+ C+F A+ + E P+ +P C + K G+C+YG+ C +
Sbjct: 294 CASFMKMGICPYGNKCQF---AHGENELKVVERPPKWRSKP-CVNWAKYGSCRYGNRCCF 349
Query: 113 HH 114
H
Sbjct: 350 KH 351
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M G C YG C+F H + + P S+P C N++ YG C++G
Sbjct: 294 CASFMKMGICPYGNKCQFAHGENELKVVER----PPKWRSKP----CVNWAKYGSCRYGN 345
Query: 316 TCRFDH 321
C F H
Sbjct: 346 RCCFKH 351
>gi|17540276|ref|NP_502931.1| Protein CCCH-2 [Caenorhabditis elegans]
gi|3876905|emb|CAB05191.1| Protein CCCH-2 [Caenorhabditis elegans]
Length = 186
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + T C YG CKF H E + Q N G + P + +C N+S G CK+G
Sbjct: 78 CKTFQLTRACSYGEQCKFAHSVEEL-QLKQKNRG-VNHP-KYKTVLCDNFSRTGHCKYGT 134
Query: 316 TCRFDH 321
C+F H
Sbjct: 135 KCQFIH 140
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 40/98 (40%), Gaps = 15/98 (15%)
Query: 18 DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
D++ E + RLK +N + C ++ T C YG C+F H
Sbjct: 57 DDLHEEMMRLKRKENAFKTAL--------------CKTFQLTRACSYGEQCKFAHSVEEL 102
Query: 78 QGAQYREELPE-RNGQPDCGYYLKTGTCKYGSTCKYHH 114
Q Q + + C + +TG CKYG+ C++ H
Sbjct: 103 QLKQKNRGVNHPKYKTVLCDNFSRTGHCKYGTKCQFIH 140
>gi|412992223|emb|CCO19936.1| PREDICTED: similar to predicted protein [Bathycoccus prasinos]
Length = 823
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY-AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
C+F+ + G C G+ C+F+H A AA+GA E+ + + P C ++ K G CKYG TCK
Sbjct: 765 CVFFAK-GTCNKGNACKFSHHASSAAEGAG---EVVDTSNVP-CVFFAK-GKCKYGETCK 818
Query: 112 YHH 114
+ H
Sbjct: 819 FSH 821
>gi|383857861|ref|XP_003704422.1| PREDICTED: uncharacterized protein LOC100877850 [Megachile
rotundata]
Length = 380
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 96 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 147
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 148 RCHFIHNF 155
>gi|340723738|ref|XP_003400246.1| PREDICTED: hypothetical protein LOC100651220 [Bombus terrestris]
Length = 397
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H S + L + +C + G C +GP
Sbjct: 86 CRPFEESGTCKYGDKCQFAH--------GYSELRNLARHPKYKTELCRTFHTIGFCPYGP 137
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 138 RCHFIHNF 145
>gi|241952458|ref|XP_002418951.1| zinc finger-containing regulatory protein, putative [Candida
dubliniensis CD36]
gi|223642290|emb|CAX44259.1| zinc finger-containing regulatory protein, putative [Candida
dubliniensis CD36]
Length = 202
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG C Y + C+F H S + + P + C+N+S YG C++G
Sbjct: 143 CASFMKTGVCPYASKCQFAH--------GESELKHVERPPKWRSKPCANWSKYGSCRYGN 194
Query: 316 TCRFDH 321
C F H
Sbjct: 195 RCCFKH 200
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C Y S C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 143 CASFMKTGVCPYASKCQF---AHGESELKHVERPPKWRSKP-CANWSKYGSCRYGNRCCF 198
Query: 113 HH 114
H
Sbjct: 199 KH 200
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 69 RFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
+ +HP ++ Q +L + C ++KTG C Y S C++ H G
Sbjct: 120 QVHHPQHSHTKTQINTQLYKTEL---CASFMKTGVCPYASKCQFAH-------GESELKH 169
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+ P + K C + + GSC++G C F H
Sbjct: 170 VERPPKWRSKPCANWSKYGSCRYGNRCCFKH 200
>gi|324505301|gb|ADY42279.1| Tristetraprolin [Ascaris suum]
Length = 388
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 15/70 (21%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP----GQAICSNYSMYGIC 311
CR Y TG C YG C+F H G L LP + +C+ ++++G C
Sbjct: 158 CREYRGTGKCSYGDGCRFAH-----------GAGELRLPPQAHPKYKTQLCNKFALFGTC 206
Query: 312 KFGPTCRFDH 321
+G C+F H
Sbjct: 207 PYGARCQFIH 216
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 48/116 (41%), Gaps = 14/116 (12%)
Query: 78 QGAQYREELPERNGQPD------CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL 131
+G +R L Q D C Y TG C YG C++ H GAG +
Sbjct: 135 RGLVHRRMLSVERRQTDIYKTALCREYRGTGKCSYGDGCRFAH-----GAGELRLPPQAH 189
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
P + + C + G+C +G C+F H +PS A N + S+G S + S
Sbjct: 190 P-KYKTQLCNKFALFGTCPYGARCQFIHRRPSEFNYA--KEENRDVKSVGPSNIQS 242
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 13/69 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQ-----GAQYREELPERNGQPDCGYYLKTGTCKYG 107
C YR TG C YG CRF H A + +Y+ +L C + GTC YG
Sbjct: 158 CREYRGTGKCSYGDGCRFAHGAGELRLPPQAHPKYKTQL--------CNKFALFGTCPYG 209
Query: 108 STCKYHHPK 116
+ C++ H +
Sbjct: 210 ARCQFIHRR 218
>gi|111226448|ref|XP_637949.2| hypothetical protein DDB_G0285973 [Dictyostelium discoideum AX4]
gi|90970577|gb|EAL64445.2| hypothetical protein DDB_G0285973 [Dictyostelium discoideum AX4]
Length = 437
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 14/70 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYG 107
C ++ TG+C YG C+F H R+EL P C + G+C YG
Sbjct: 201 CRSFQETGVCRYGLKCQFAH---------GRDELRSVMRHPKYKTETCKTFYSIGSCPYG 251
Query: 108 STCKYHHPKD 117
S C++ H +D
Sbjct: 252 SRCRFIHTRD 261
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 46/101 (45%), Gaps = 15/101 (14%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+Y+ EL C + +TG C+YG C++ H +D + ++ P + E +C
Sbjct: 195 RYKTEL--------CRSFQETGVCRYGLKCQFAHGRDELRS------VMRHPKYKTE-TC 239
Query: 141 PYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMG 181
+ GSC +G C+F H + L L + S GS+
Sbjct: 240 KTFYSIGSCPYGSRCRFIHTRDPELPIHLMSQLSTSSGSIS 280
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG C+YG C+F H ++ + + P + C + G C +G
Sbjct: 201 CRSFQETGVCRYGLKCQFAHGRDELR-------SVMRHPKYKTET-CKTFYSIGSCPYGS 252
Query: 316 TCRFDH 321
CRF H
Sbjct: 253 RCRFIH 258
>gi|303272789|ref|XP_003055756.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463730|gb|EEH61008.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 63
Score = 43.5 bits (101), Expect = 0.19, Method: Composition-based stats.
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG C+YG C+F H ++ + P+ + +C ++ G C +G
Sbjct: 6 CRSWEETGACRYGVKCQFAHGRDELR--------PVLRHPKYKTEVCRTFAQNGTCPYGT 57
Query: 316 TCRFDH 321
CRF H
Sbjct: 58 RCRFIH 63
>gi|291240057|ref|XP_002739937.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 2
[Saccoglossus kowalevskii]
Length = 367
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 313
CR + GTCKYG C+F H + GL P +C + G C +
Sbjct: 118 CRPFEENGTCKYGDKCQFAHGDHELR----------GLSRHPKYKTELCRTFHTIGFCPY 167
Query: 314 GPTCRFDH 321
GP C F H
Sbjct: 168 GPRCHFIH 175
>gi|291240055|ref|XP_002739936.1| PREDICTED: zinc finger protein 36, C3H type-like 1-like isoform 1
[Saccoglossus kowalevskii]
Length = 355
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 313
CR + GTCKYG C+F H + GL P +C + G C +
Sbjct: 106 CRPFEENGTCKYGDKCQFAHGDHELR----------GLSRHPKYKTELCRTFHTIGFCPY 155
Query: 314 GPTCRFDH 321
GP C F H
Sbjct: 156 GPRCHFIH 163
>gi|302692746|ref|XP_003036052.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
gi|300109748|gb|EFJ01150.1| hypothetical protein SCHCODRAFT_50301 [Schizophyllum commune H4-8]
Length = 287
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 35/74 (47%), Gaps = 6/74 (8%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-PSRPGQAI----CSNYSMY 308
P+C +Y G C G +C + HPKER + G L PS P + I C NY +
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPSCPRKHIRRIACQNY-LT 179
Query: 309 GICKFGPTCRFDHP 322
G C GP C HP
Sbjct: 180 GFCPLGPECPRGHP 193
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERR 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ TG C G C HP+P+
Sbjct: 148 VECPDYKRGFCKLGPSCPRKHIRRIACQNYL-TGFCPLGPECPRGHPKPN 196
>gi|170085227|ref|XP_001873837.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651389|gb|EDR15629.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 292
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C ++ K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECWWFAKYGYCSAGDECLYAHPKERR 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + K +C Y+ TG C G C HP+P
Sbjct: 148 VECPDYNRGFCKLGPSCPRKHVRKVACQLYL-TGFCPLGPECLRGHPKPD 196
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C ++ G C G +C + HPKER + N G L P + + + + G
Sbjct: 121 PECWWFAKYGYCSAGDECLYAHPKERRVECPDYNRGFCKLGPSCPRKHVRKVACQLYLTG 180
Query: 310 ICKFGPTCRFDHPYAGYP 327
C GP C HP P
Sbjct: 181 FCPLGPECLRGHPKPDLP 198
>gi|320592591|gb|EFX05021.1| hypothetical protein CMQ_5283 [Grosmannia clavigera kw1407]
Length = 740
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%), Gaps = 9/73 (12%)
Query: 48 PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYG 107
P P C +Y R G C G CRF+H Q LP Q C ++ + G C+ G
Sbjct: 55 PVRPQCTYYNR-GNCLRGMTCRFSHEGTPQQ-------LPAIRAQNPCHFFAR-GRCRNG 105
Query: 108 STCKYHHPKDRNG 120
+TC++ H + +G
Sbjct: 106 ATCRFSHNQAEDG 118
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
Q++ P +P C YY N G C G C+F H P LP+ Q C +
Sbjct: 49 QHIRPTPVRPQCTYY-NRGNCLRGMTCRFSHEG-----------TPQQLPAIRAQNPC-H 95
Query: 305 YSMYGICKFGPTCRFDHPYA 324
+ G C+ G TCRF H A
Sbjct: 96 FFARGRCRNGATCRFSHNQA 115
>gi|389632125|ref|XP_003713715.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
gi|351646048|gb|EHA53908.1| CCCH zinc finger protein [Magnaporthe oryzae 70-15]
Length = 452
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 43/107 (40%), Gaps = 23/107 (21%)
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
++ G SRN G + I+ A QN P R Q CR + TG+C G C++
Sbjct: 225 AVVGGVKFLRSRN----GNMVRHDIVKAQRQNGPVRKVQTPCRMFSTTGSCTKGPLCRYQ 280
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
H PL + AIC ++ + G C G +C H
Sbjct: 281 HD-------------PLKV------AICKDFLLKGDCIGGDSCDLSH 308
>gi|72010393|ref|XP_782811.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like isoform
2 [Strongylocentrotus purpuratus]
Length = 386
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y GTCKYG C+F H + L + +C + G C +GP
Sbjct: 123 CRPYEENGTCKYGDKCQFAH--------GIHELRVLSRHPKYKTELCRTFHTVGFCPYGP 174
Query: 316 TCRFDH 321
C F H
Sbjct: 175 RCHFIH 180
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 13/76 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y G C YG C+F H + ++ +Y+ EL C + G C YG
Sbjct: 123 CRPYEENGTCKYGDKCQFAHGIHELRVLSRHPKYKTEL--------CRTFHTVGFCPYGP 174
Query: 109 TCKY-HHPKDRNGAGP 123
C + H+P +R + P
Sbjct: 175 RCHFIHNPDERKLSSP 190
>gi|389751127|gb|EIM92200.1| hypothetical protein STEHIDRAFT_47086 [Stereum hirsutum FP-91666
SS1]
Length = 296
Score = 43.5 bits (101), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERK 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ TG C G C HP+P+
Sbjct: 148 VECPDYKRGFCKLGPKCPRKHIRRVACQLYL-TGFCPLGPDCPRGHPKPN 196
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C +Y G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERKVECPDYKRGFCKLGPKCPRKHIRRVACQLYLTG 180
Query: 310 ICKFGPTCRFDHPYAGYP 327
C GP C HP P
Sbjct: 181 FCPLGPDCPRGHPKPNIP 198
>gi|146162775|ref|XP_001010054.2| tristetraproline, zinc finger protein [Tetrahymena thermophila]
gi|146146277|gb|EAR89809.2| tristetraproline, zinc finger protein [Tetrahymena thermophila
SB210]
Length = 294
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + TGTCK+G C F H KE++ G + L C + + GIC +G
Sbjct: 130 CKNWTATGTCKFGDKCSFAHGKEQLQ-------GKIHLHPNYKTKPCKKFFIKGICSYGN 182
Query: 316 TCRFDH 321
C++ H
Sbjct: 183 RCQYIH 188
>gi|407041185|gb|EKE40575.1| zinc finger protein, putative [Entamoeba nuttalli P19]
Length = 222
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 7/73 (9%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHP-------AYAAQGAQYREELPERNGQPDCGYYLKT 101
G C+F+ + G C GS+C F+H ++ Q ++ + + C Y+ +T
Sbjct: 137 GTKPCIFFMQNGYCKKGSSCTFSHDISSLNNHSFCQQNSKQFVSVDKLYRTKPCKYFFET 196
Query: 102 GTCKYGSTCKYHH 114
G C+ G C + H
Sbjct: 197 GVCRKGEHCNFSH 209
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 85 ELPE------RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSF------NILGLP 132
ELP+ + G C ++++ G CK GS+C + H D + SF + +
Sbjct: 125 ELPDSPQKHLKYGTKPCIFFMQNGYCKKGSSCTFSH--DISSLNNHSFCQQNSKQFVSVD 182
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHH 159
K C Y+ TG C+ G C F H
Sbjct: 183 KLYRTKPCKYFFETGVCRKGEHCNFSH 209
>gi|449551266|gb|EMD42230.1| hypothetical protein CERSUDRAFT_110762 [Ceriporiopsis subvermispora
B]
Length = 282
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERR 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 148 IECPDYKRGFCKLGPTCPRKHVRRVACQLYL-TGFCPLGPECPRGHPKPD 196
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 32/78 (41%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C +Y G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWYAKYGYCSAGDECLYAHPKERRIECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG 180
Query: 310 ICKFGPTCRFDHPYAGYP 327
C GP C HP P
Sbjct: 181 FCPLGPECPRGHPKPDIP 198
>gi|294892295|ref|XP_002773992.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
gi|239879196|gb|EER05808.1| hypothetical protein Pmar_PMAR011857 [Perkinsus marinus ATCC 50983]
Length = 274
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 38/83 (45%), Gaps = 25/83 (30%)
Query: 87 PERNGQ--------PDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK 138
PE NGQ P C +Y + G C+ G TCK+ H ++ A PV
Sbjct: 14 PEENGQFLHSDEKHPACHFYAR-GRCRNGDTCKFSHAEEVVAAKPV-------------- 58
Query: 139 SCPYYMRTGSCKFGVACKFHHPQ 161
C ++++ G CK G C+F H Q
Sbjct: 59 -CHFFVK-GECKNGDTCRFLHQQ 79
>gi|449688559|ref|XP_002159721.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Hydra
magnipapillata]
Length = 332
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 61/156 (39%), Gaps = 28/156 (17%)
Query: 172 TGNASLGSMGSSVLPSSGLQYAGI----VPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRN 227
T + +L S+ + + + L + + +P+ + + GN+ P + + S
Sbjct: 47 TNSTTLISLTTQITKAQVLSPSSLSFYPMPSSPKDKFSGNVSPFRERAQSASF------- 99
Query: 228 QGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
Q +L A + + SS+ E CR + GTCKYG C+F H +
Sbjct: 100 QEELDAQQRKRNSTNSSRYKTEL-----CRPFEENGTCKYGDKCQFAHGFHELR------ 148
Query: 288 IGPLGLPSRP--GQAICSNYSMYGICKFGPTCRFDH 321
GL P C Y G C +GP C F H
Sbjct: 149 ----GLNRHPKYKTEFCRTYHTIGFCPYGPRCHFIH 180
>gi|168053987|ref|XP_001779415.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669213|gb|EDQ55805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 552
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + TG C+Y + C+F H ++ P+ + +C +Y+ G+C +G
Sbjct: 455 CRSWEETGYCRYASKCQFAH--------GNDDLRPVPRHPKYKTELCRSYTETGLCNYGK 506
Query: 316 TCRFDH 321
CRF H
Sbjct: 507 RCRFIH 512
>gi|440294366|gb|ELP87383.1| hypothetical protein EIN_096400 [Entamoeba invadens IP1]
Length = 239
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 7/75 (9%)
Query: 46 ARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA------QYREELPERNGQPDCGYYL 99
+ G C+F+ + G C G NC F+H Q+ +P C Y+
Sbjct: 153 VKYGTKPCIFFMQNGYCKKGDNCTFSHDVSTTHSTNTSPQKQFVSVDKLYRTKP-CKYFF 211
Query: 100 KTGTCKYGSTCKYHH 114
+TGTC+ G C + H
Sbjct: 212 ETGTCRKGEHCNFSH 226
Score = 38.5 bits (88), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVS--FNILGLPMRQDEKSCPYYMRTGS 148
G C ++++ G CK G C + H + S + + K C Y+ TG+
Sbjct: 156 GTKPCIFFMQNGYCKKGDNCTFSHDVSTTHSTNTSPQKQFVSVDKLYRTKPCKYFFETGT 215
Query: 149 CKFGVACKFHH 159
C+ G C F H
Sbjct: 216 CRKGEHCNFSH 226
>gi|299755658|ref|XP_002912126.1| no arches protein [Coprinopsis cinerea okayama7#130]
gi|298411323|gb|EFI28632.1| no arches protein [Coprinopsis cinerea okayama7#130]
Length = 278
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 51/124 (41%), Gaps = 21/124 (16%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C ++ K G C G C Y HPK+R
Sbjct: 100 GLCKKGDACEFLHEYNLRR-------------MPECWWFAKYGYCSAGDECLYAHPKERR 146
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTG 173
P F LG P + K +C Y+ TG C G C HP+P L +A +
Sbjct: 147 IECPDYNRGFCKLGPTCPRKHVRKVACQLYL-TGFCPAGPECPKGHPKP-QLPSASDYSN 204
Query: 174 NASL 177
ASL
Sbjct: 205 QASL 208
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C ++ G C G +C + HPKER + N G L P + + + + G
Sbjct: 120 PECWWFAKYGYCSAGDECLYAHPKERRIECPDYNRGFCKLGPTCPRKHVRKVACQLYLTG 179
Query: 310 ICKFGPTCRFDHPYAGYP 327
C GP C HP P
Sbjct: 180 FCPAGPECPKGHPKPQLP 197
>gi|393218795|gb|EJD04283.1| hypothetical protein FOMMEDRAFT_155406 [Fomitiporia mediterranea
MF3/22]
Length = 914
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 34/75 (45%), Gaps = 11/75 (14%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+YG C+F H +E I + A + IC + + G C +G
Sbjct: 584 CRSWEEKGTCRYGPKCQFAHGEEEIRKVARH--------PKYKTEICRTFWVSGSCPYGK 635
Query: 316 TCRFDH---PYAGYP 327
C F H P +G P
Sbjct: 636 RCCFIHTELPTSGTP 650
>gi|225713900|gb|ACO12796.1| RING finger protein unkempt [Lepeophtheirus salmonis]
Length = 469
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 90/257 (35%), Gaps = 68/257 (26%)
Query: 95 CGYYLKTGTCKYGSTCKY-------HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTG 147
C +L G+C +G C++ PK++N P+ L C + +G
Sbjct: 72 CAKFLSIGSCPFGVACRFARGVRELRKPKNKNN--PLFKTTL----------CKLFSESG 119
Query: 148 SCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGN 207
C V C+F H G A + + S + PG+ T + +
Sbjct: 120 FCPNAVNCQFAH------GVAELRSKPIDSFELESLSPEERQRRLEKAKNTPGYKTKICS 173
Query: 208 ---------IGPLS-----PTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ 253
G L I G +L++ + N A + +
Sbjct: 174 KYREHNHCEFGELCHFIHGNEVIPGIDLMHKNDNSNKFDATYKTTM-------------- 219
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKER------IAQSAASNIG---PLGLPSRPGQAICSN 304
CR M+ C+YG+ C+F H + ++ +A N L + +CSN
Sbjct: 220 --CRKIMSKEMCEYGSKCRFAHSESELRKPLNVSMNAPHNTNYHNSLAFKT----VLCSN 273
Query: 305 YSMYGICKFGPTCRFDH 321
Y+ G CK+G C+F H
Sbjct: 274 YTETGQCKYGDNCQFAH 290
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 65/309 (21%), Positives = 102/309 (33%), Gaps = 71/309 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG----QPDCGYYLKTGTCKYGS 108
C + G C +G CRF A+G + + +N C + ++G C
Sbjct: 72 CAKFLSIGSCPFGVACRF------ARGVRELRKPKNKNNPLFKTTLCKLFSESGFCPNAV 125
Query: 109 TCKYHHPKDRNGAGPV-SFNILGLP----MRQDEKS----------CPYYMRTGSCKFGV 153
C++ H + P+ SF + L R+ EK+ C Y C+FG
Sbjct: 126 NCQFAHGVAELRSKPIDSFELESLSPEERQRRLEKAKNTPGYKTKICSKYREHNHCEFGE 185
Query: 154 ACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSP 213
C F H G+ V+P L + N +
Sbjct: 186 LCHFIH---------------------GNEVIPGIDLMHKN----DNSNKFDATYKTTMC 220
Query: 214 TSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMNTGTC 265
I + + +++ S N P + + C Y TG C
Sbjct: 221 RKIMSKEMCEYGSKCRFAHSESELRKPLNVSMNAPHNTNYHNSLAFKTVLCSNYTETGQC 280
Query: 266 KYGADCKFHHPKE--RIAQSAASNIGPLGLP-------SRPG----QAICSNYSMYGICK 312
KYG +C+F H E R+ Q +NI +P + P +C+N C
Sbjct: 281 KYGDNCQFAHGSEQLRLPQPLQANIQQQSIPPISKFSGNSPSVLYKTTMCANIRNKIPCP 340
Query: 313 FGPTCRFDH 321
GP+C F H
Sbjct: 341 HGPSCLFAH 349
>gi|348533173|ref|XP_003454080.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Oreochromis niloticus]
Length = 425
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 65/181 (35%), Gaps = 48/181 (26%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNG------------QPDCGYY 98
C++Y R G C G++C F H P A ++ R + +G P C Y+
Sbjct: 133 CMYYNRFGKCNRGTSCPFIHDPDKVAVCTRFLRGTCKQADGTCPFSHKVAKEKMPVCSYF 192
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP------MRQDEKSCPYYMRTGSCKFG 152
LK G C S C Y H A + G ++ CP + +TGSC G
Sbjct: 193 LK-GICN-NSDCPYSHVYVSRKAEVCQDFVKGYCPEGEKCKKKHTLVCPDFSKTGSCPHG 250
Query: 153 VACKFHHPQPSS------------------------LGTALPLTGNASLG--SMGSSVLP 186
CK H Q L +P ASLG S GS VLP
Sbjct: 251 SRCKLQHRQRVKRRASNTVTPPAKKARSKEPLKRPHLSVVMPQDSQASLGMPSTGSLVLP 310
Query: 187 S 187
S
Sbjct: 311 S 311
>gi|326500250|dbj|BAK06214.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1031
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 43/107 (40%), Gaps = 22/107 (20%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC ++C+ H LPER DC Y+LK G C + C Y H K +
Sbjct: 805 GLCS-DTSCKLTHKV-----------LPER--MQDCSYFLK-GLC-TNTACPYRHVKVNS 848
Query: 120 GAGPVSFNILGLPMRQDE------KSCPYYMRTGSCKFGVACKFHHP 160
A + G DE +CP + TG C CK HHP
Sbjct: 849 NAPACEDFLKGYCADGDECRKKHSYACPVFEATGECPQQSTCKLHHP 895
>gi|290985913|ref|XP_002675669.1| predicted protein [Naegleria gruberi]
gi|284089267|gb|EFC42925.1| predicted protein [Naegleria gruberi]
Length = 299
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + TG C YG C+F H + + +Y+ EL C Y GTC YG
Sbjct: 191 CRSWEETGYCRYGDKCQFAHGRHELRLVTRHHKYKSEL--------CNNYHYEGTCMYGI 242
Query: 109 TCKYHHPKDRNGAG-PVSFNILGLPMRQDEK 138
C + H DR G +S NI +P+ Q +
Sbjct: 243 RCCFIHSIDRCVIGRALSQNIDMVPIHQTSR 273
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 14/82 (17%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ--- 299
+S N +R CR + TG C+YG C+F H + L L +R +
Sbjct: 178 ASYNGKDRYKTELCRSWEETGYCRYGDKCQFAHGRHE-----------LRLVTRHHKYKS 226
Query: 300 AICSNYSMYGICKFGPTCRFDH 321
+C+NY G C +G C F H
Sbjct: 227 ELCNNYHYEGTCMYGIRCCFIH 248
>gi|50555936|ref|XP_505376.1| YALI0F13497p [Yarrowia lipolytica]
gi|49651246|emb|CAG78183.1| YALI0F13497p [Yarrowia lipolytica CLIB122]
Length = 395
Score = 43.1 bits (100), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + KTG+C YG C++ H G + P + K C ++RTG+C +
Sbjct: 337 CSSFQKTGSCSYGEKCQFAH-------GEHELKNVDRPPKWRSKLCQNWLRTGTCAYNDR 389
Query: 155 CKFHH 159
C F H
Sbjct: 390 CCFKH 394
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 12/66 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C +++TG C YG C+F H + + ++R +L C +L+TGTC Y
Sbjct: 337 CSSFQKTGSCSYGEKCQFAHGEHELKNVDRPPKWRSKL--------CQNWLRTGTCAYND 388
Query: 109 TCKYHH 114
C + H
Sbjct: 389 RCCFKH 394
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + TG+C YG C+F H + + + P + +C N+ G C +
Sbjct: 337 CSSFQKTGSCSYGEKCQFAHGEHELKN--------VDRPPKWRSKLCQNWLRTGTCAYND 388
Query: 316 TCRFDH 321
C F H
Sbjct: 389 RCCFKH 394
>gi|302805214|ref|XP_002984358.1| hypothetical protein SELMODRAFT_423539 [Selaginella moellendorffii]
gi|300147746|gb|EFJ14408.1| hypothetical protein SELMODRAFT_423539 [Selaginella moellendorffii]
Length = 710
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 15/69 (21%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G+ C+++RR G C G+ C F+H + C ++L C+YG+
Sbjct: 593 GKVQCVYFRR-GFCAKGNGCEFSHSVSSTPAV--------------CKFFLSGDGCRYGA 637
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 638 HCRYKHDSD 646
>gi|432889388|ref|XP_004075252.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-A-like [Oryzias
latipes]
Length = 390
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 313
CR Y +G+CKYGA C+F H E + GL P C + G C +
Sbjct: 151 CRTYEESGSCKYGAKCQFAHGLEELR----------GLSRHPKYKTEPCRTFHTIGFCPY 200
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 201 GARCHFIH 208
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 35/83 (42%), Gaps = 4/83 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +G C YG+ C+F H +G P+ +P C + G C YG+ C +
Sbjct: 151 CRTYEESGSCKYGAKCQFAHGLEELRGLSRH---PKYKTEP-CRTFHTIGFCPYGARCHF 206
Query: 113 HHPKDRNGAGPVSFNILGLPMRQ 135
H D A P + P+R
Sbjct: 207 IHNADEIQAAPHRQKLRPPPLRH 229
>gi|395334078|gb|EJF66454.1| hypothetical protein DICSQDRAFT_150954 [Dichomitus squalens
LYAD-421 SS1]
Length = 750
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 67/158 (42%), Gaps = 21/158 (13%)
Query: 167 TALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIG-PLSPTSIAGSNL--IY 223
+ALP+ N G+ G+ PS L A ++ A Y G G PL +A +N +
Sbjct: 356 SALPMFSNQFYGAPGAEPYPSPELAAAQMM-AQLQAQYTGAYGVPLGAQGVAMNNTGSSH 414
Query: 224 SSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 283
++ N G+ G A L L CR + GTC+YGA C+F H +E + +
Sbjct: 415 TNTNPGN-GPSANNRKLGLYKTEL--------CRSWEEKGTCRYGAKCQFAHGEEELRK- 464
Query: 284 AASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+ + IC + + G C +G C F H
Sbjct: 465 -------VQRHPKYKTEICRTFWVSGSCPYGKRCCFIH 495
>gi|390359026|ref|XP_793440.2| PREDICTED: tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like
[Strongylocentrotus purpuratus]
Length = 628
Score = 43.1 bits (100), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 14/71 (19%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
ERP C ++ C++G CKF H +++ A +I P C N+ +
Sbjct: 109 ERP----CLDFLRGAGCRFGDKCKFSHDIQKLMAGKAPDINPR----------CINFDKF 154
Query: 309 GICKFGPTCRF 319
G C +G CRF
Sbjct: 155 GSCPYGMLCRF 165
>gi|91080779|ref|XP_968440.1| PREDICTED: similar to Tis11-like protein [Tribolium castaneum]
Length = 250
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y G CKYG C+F H + + L + +C Y G C +GP
Sbjct: 102 CRPYEEFGVCKYGDKCQFAH--------GGAELRSLARHPKYKTELCRTYHTVGFCPYGP 153
Query: 316 TCRFDH 321
C F H
Sbjct: 154 RCHFVH 159
>gi|395514832|ref|XP_003761616.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Sarcophilus harrisii]
Length = 211
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 312
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 313 FGPTCRFDHPYAGYPI 328
GP+C+F HP P+
Sbjct: 126 EGPSCKFMHPRFELPM 141
>gi|156063954|ref|XP_001597899.1| hypothetical protein SS1G_02095 [Sclerotinia sclerotiorum 1980]
gi|154697429|gb|EDN97167.1| hypothetical protein SS1G_02095 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1246
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 46/129 (35%), Gaps = 26/129 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-----------------PAYAAQGAQYREELPERNGQPD- 94
C FY G C G CR H PA + + + + P G P
Sbjct: 456 CFFYNLDGNCRRGDACRDLHNSNSNIPVRSPPPGWVPPASSGKTMSRKSQAPHSVGGPKM 515
Query: 95 -CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP-YYMRTGSCKFG 152
C Y+ CK G CK H D + PV+ +P+ KS P Y G C+
Sbjct: 516 VCYYWYSENNCKKGDECKLAHSNDND--FPVATKPGSIPL----KSIPCKYWNQGHCQLD 569
Query: 153 VACKFHHPQ 161
C F H Q
Sbjct: 570 RNCYFKHEQ 578
>gi|390356014|ref|XP_003728683.1| PREDICTED: uncharacterized protein LOC100892284 [Strongylocentrotus
purpuratus]
Length = 1384
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 73/201 (36%), Gaps = 50/201 (24%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPD-----------CLFYRRTGLCGYGSNC 68
I+E + ++ +G G + + P P EP C FY G C G NC
Sbjct: 286 IQEKLKKIAQAAKLKGKGRGRGAIGPKPPKEPRGGEQKMMLHLICKFYLE-GRCKKGENC 344
Query: 69 RFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
++H +L ++ Q C +Y+ +G C G TC Y H G P
Sbjct: 345 TYSH------------DLTQQRKQELCKFYV-SGFCNKGDTCLYMH-----GEFP----- 381
Query: 129 LGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGS-SVLPS 187
C YY C G C+F H L + + SL S P
Sbjct: 382 -----------CKYYHSGSECFQGDKCRFSH---GPLNPHTRMLLDKSLSSFEEYEERPR 427
Query: 188 SGLQYAGIVPAPGWNTYMGNI 208
S + G++P P +++ ++
Sbjct: 428 SPSKTKGLLPTPNDTSHIPSL 448
>gi|302771343|ref|XP_002969090.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
gi|300163595|gb|EFJ30206.1| hypothetical protein SELMODRAFT_16791 [Selaginella moellendorffii]
Length = 136
Score = 43.1 bits (100), Expect = 0.29, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHH------PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
C+ + G C YG C F H P A S AS PL +R +C+ + G
Sbjct: 63 CKRFFAEGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTR----LCNKWETTG 118
Query: 310 ICKFGPTCRFDHPYAG 325
C FG C F H AG
Sbjct: 119 SCPFGDKCHFAHGIAG 134
Score = 38.5 bits (88), Expect = 5.9, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 58 RTGLCGYGSNCRFNH-----------------PAYAAQGAQYREELPERNGQPDCGYYLK 100
R G C Y +NC F H P A G +L +P C +
Sbjct: 15 RAGTCPYITNCNFAHGMEELRKPPPGWEEFVNPPVVADGGGNAAKL-----RP-CKRFFA 68
Query: 101 TGTCKYGSTCKYHH--PKDRNGAG-PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
G C YG C + H P + A +S P+ + C + TGSC FG C F
Sbjct: 69 EGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTRLCNKWETTGSCPFGDKCHF 128
Query: 158 HH 159
H
Sbjct: 129 AH 130
>gi|348688082|gb|EGZ27896.1| hypothetical protein PHYSODRAFT_353449 [Phytophthora sojae]
Length = 250
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 41/86 (47%), Gaps = 15/86 (17%)
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQ 135
A+ Y+ EL C +Y + G+C+YGS C++ H ++ +L P +
Sbjct: 37 TARNNLYKTEL--------CKHYTENGSCRYGSKCQFAHGEEELRG------VLRHPKYK 82
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQ 161
+ C +M TG C +G C+F H +
Sbjct: 83 TTR-CKAFMSTGKCMYGSRCRFIHTR 107
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C++Y G+C+YG+ C+F H +E + G L P + C + G C +G
Sbjct: 48 CKHYTENGSCRYGSKCQFAHGEEELR-------GVLRHP-KYKTTRCKAFMSTGKCMYGS 99
Query: 316 TCRFDH 321
CRF H
Sbjct: 100 RCRFIH 105
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y G C YGS C+F H +G + C ++ TG C YGS C++
Sbjct: 48 CKHYTENGSCRYGSKCQFAHGEEELRGVLRHPKYKTTR----CKAFMSTGKCMYGSRCRF 103
Query: 113 HHPK 116
H +
Sbjct: 104 IHTR 107
>gi|30466247|ref|NP_848671.1| cleavage and polyadenylation specificity factor subunit 4 [Mus
musculus]
gi|348568560|ref|XP_003470066.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 3 [Cavia porcellus]
gi|37999672|sp|Q8BQZ5.1|CPSF4_MOUSE RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=Clipper homolog; AltName:
Full=Clipper/CPSF 30K
gi|26337803|dbj|BAC32587.1| unnamed protein product [Mus musculus]
Length = 211
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 312
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 68 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 125
Query: 313 FGPTCRFDHPYAGYPI 328
GP+C+F HP P+
Sbjct: 126 EGPSCKFMHPRFELPM 141
>gi|148687046|gb|EDL18993.1| cleavage and polyadenylation specific factor 4, isoform CRA_b [Mus
musculus]
Length = 251
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 312
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 92 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 149
Query: 313 FGPTCRFDHPYAGYPI 328
GP+C+F HP P+
Sbjct: 150 EGPSCKFMHPRFELPM 165
>gi|302784404|ref|XP_002973974.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
gi|300158306|gb|EFJ24929.1| hypothetical protein SELMODRAFT_16790 [Selaginella moellendorffii]
Length = 136
Score = 42.7 bits (99), Expect = 0.32, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 32/76 (42%), Gaps = 10/76 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHH------PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYG 309
C+ + G C YG C F H P A S AS PL +R +C+ + G
Sbjct: 63 CKRFFAEGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTR----LCNKWETTG 118
Query: 310 ICKFGPTCRFDHPYAG 325
C FG C F H AG
Sbjct: 119 SCPFGDKCHFAHGIAG 134
Score = 38.5 bits (88), Expect = 6.5, Method: Composition-based stats.
Identities = 34/122 (27%), Positives = 44/122 (36%), Gaps = 26/122 (21%)
Query: 58 RTGLCGYGSNCRFNH-----------------PAYAAQGAQYREELPERNGQPDCGYYLK 100
R G C Y +NC F H P A G +L +P C +
Sbjct: 15 RAGTCPYITNCNFAHGMEELRKPPPGWEDFVNPPVVADGGGNAAKL-----RP-CKRFFA 68
Query: 101 TGTCKYGSTCKYHH--PKDRNGAG-PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
G C YG C + H P + A +S P+ + C + TGSC FG C F
Sbjct: 69 EGVCPYGERCIFSHEDPAVKPAATTAISNASTAKPLNWKTRLCNKWETTGSCPFGDKCHF 128
Query: 158 HH 159
H
Sbjct: 129 AH 130
>gi|17538616|ref|NP_501542.1| Protein OMA-1 [Caenorhabditis elegans]
gi|3874120|emb|CAA90977.1| Protein OMA-1 [Caenorhabditis elegans]
Length = 407
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ + TC + +C+F H +E + + + PL ++ +C Y+ G+C +G
Sbjct: 118 CQAWLESKTCSFADNCRFAHGEEELR---PTFVEPLQ-NNKYKTKLCDKYTTTGLCPYGK 173
Query: 316 TCRFDHPYAG 325
C F HP G
Sbjct: 174 RCLFIHPDHG 183
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 16/71 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNH------PAYAA--QGAQYREELPERNGQPDCGYYLKTGTC 104
C + + C + NCRF H P + Q +Y+ +L C Y TG C
Sbjct: 118 CQAWLESKTCSFADNCRFAHGEEELRPTFVEPLQNNKYKTKL--------CDKYTTTGLC 169
Query: 105 KYGSTCKYHHP 115
YG C + HP
Sbjct: 170 PYGKRCLFIHP 180
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 34/81 (41%), Gaps = 9/81 (11%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDR---NGAGPVSFNILGLPMRQDEKS 139
R + PE C +L++ TC + C++ H ++ P+ N + K
Sbjct: 106 RMQKPESYKTVICQAWLESKTCSFADNCRFAHGEEELRPTFVEPLQNN------KYKTKL 159
Query: 140 CPYYMRTGSCKFGVACKFHHP 160
C Y TG C +G C F HP
Sbjct: 160 CDKYTTTGLCPYGKRCLFIHP 180
>gi|270005438|gb|EFA01886.1| hypothetical protein TcasGA2_TC007496 [Tribolium castaneum]
Length = 213
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y G CKYG C+F H + + L + +C Y G C +GP
Sbjct: 65 CRPYEEFGVCKYGDKCQFAH--------GGAELRSLARHPKYKTELCRTYHTVGFCPYGP 116
Query: 316 TCRFDH 321
C F H
Sbjct: 117 RCHFVH 122
>gi|384483915|gb|EIE76095.1| hypothetical protein RO3G_00799 [Rhizopus delemar RA 99-880]
Length = 122
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +TG+C+YG C+Y H GP + + K+C Y G+C +GV
Sbjct: 18 CRNWDETGSCRYGKRCRYAH-------GPEELRAVPRSSQYKTKACRSYHEKGACPYGVR 70
Query: 155 CKFHH 159
C F H
Sbjct: 71 CTFKH 75
>gi|110751353|ref|XP_001121251.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1 [Apis mellifera]
Length = 415
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 55/125 (44%), Gaps = 24/125 (19%)
Query: 256 CRYYMNTGTCKYGADCKFHHPK--------ERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
CRY+ N G C+ G +C++ H + E I S+AS++ +C + +
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGIWNDGNNETIISSSASSMN----------TVCRFFKL 59
Query: 308 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKI 366
GICKFG C F H N + SI SS H + IS +I+ D +S
Sbjct: 60 -GICKFGNQCYFRHSTETVDNNL---VNANSIESSSPGQHTSNISTPTTIKNVKDNTSIA 115
Query: 367 PNWVQ 371
WV+
Sbjct: 116 EEWVK 120
>gi|334322934|ref|XP_001378504.2| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein-like [Monodelphis domestica]
Length = 312
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 84/240 (35%), Gaps = 48/240 (20%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPA--RPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
N+EE + +NQ G G P+P + G C F+ + G C G C F H
Sbjct: 14 NLEEDV------ENQRGVGYL---PFPGMDKSGVAVCTFFLK-GFCEKGQLCPFRHD--- 60
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSF--------NI 128
+ C ++L+ G CK CK+ H D F N
Sbjct: 61 -----------DGEKTVVCKHWLR-GLCKKSDHCKFLHQYDITKMPECYFYSKFGECSNK 108
Query: 129 LGLPMRQDE----KSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL----PLTGNASLGSM 180
L + D + CP+Y G CK+G+ CKF H + L P + +
Sbjct: 109 ECLFLHADPAFKIRDCPWY-DQGFCKYGLLCKFRHTRRVLCTNYLVGFCPEGPDCKFTQV 167
Query: 181 GSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHIL 240
+ G Q+ +P P N + L G L+ + +G L + + L
Sbjct: 168 TVLLEVERGQQFQSSIPKPKENVDLA----LFEKKEKGLFLVVDRKKEGRLAKESHLFEL 223
>gi|353234687|emb|CCA66709.1| hypothetical protein PIIN_00389 [Piriformospora indica DSM 11827]
Length = 380
Score = 42.7 bits (99), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 52/133 (39%), Gaps = 26/133 (19%)
Query: 50 EPDCLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-------------REELPERNGQPDC 95
+ C F+ RTGLC G +CR+ H P A ++ P N P C
Sbjct: 158 DKQCPFFSRTGLCNRGKSCRYQHDPEKVAICPRFLTGDCPSSAENCLLSHSPTLNRVPPC 217
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGPV---SFNILGLPMRQDE------KSCPYYMRT 146
++ G CK G C Y P R G F +LG + + + CP + T
Sbjct: 218 VHFQNNGRCKNGDKCVY--PHVRVGVKHSVCRDFAVLGYCEKGIDCEEAHVRECPDFAET 275
Query: 147 GSCKFGVACKFHH 159
G+CK CK H
Sbjct: 276 GTCK-NPRCKLPH 287
>gi|357117146|ref|XP_003560335.1| PREDICTED: uncharacterized protein LOC100829964 [Brachypodium
distachyon]
Length = 1823
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 44/108 (40%), Gaps = 22/108 (20%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC ++C+ H LPER DC Y+L+ G C + C Y H K +
Sbjct: 1626 GLCS-DTSCKLTHQV-----------LPER--MQDCSYFLR-GLC-TNTACPYRHVKVNS 1669
Query: 120 GAGPVSFNILGLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
A + G DE CP + TG C +CK HHP+
Sbjct: 1670 NAPACEDFLKGYCADGDECRRKHTYVCPVFEATGECAQQSSCKLHHPK 1717
>gi|336376373|gb|EGO04708.1| hypothetical protein SERLA73DRAFT_173919 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389412|gb|EGO30555.1| hypothetical protein SERLADRAFT_454858 [Serpula lacrymans var.
lacrymans S7.9]
Length = 344
Score = 42.7 bits (99), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+C+YG+ C+F H +E I + A + IC + + G C +G
Sbjct: 29 CRSWEEKGSCRYGSKCQFAHGEEEIRKVARH--------PKYKTEICRTFWVSGACPYGK 80
Query: 316 TCRFDH 321
C F H
Sbjct: 81 RCCFIH 86
>gi|405971141|gb|EKC35995.1| Zinc finger CCCH domain-containing protein 3 [Crassostrea gigas]
Length = 728
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 48/137 (35%), Gaps = 20/137 (14%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYRE-----------ELPE 88
A+ + E C+FY R G C G C++ H P A ++ +
Sbjct: 122 ATKSKKKRAEQYCMFYNRFGKCNRGDKCKYRHDPEKVAVCTRFLRGTCSIVDCPFSHKVD 181
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL------PMRQDEKSCPY 142
+ P C Y+L+ G C C Y H K A + G + C
Sbjct: 182 KEKMPVCSYFLR-GVCSR-ENCPYLHVKVNKNAEVCQDFLQGFCSKGAKCTKSHTLVCQM 239
Query: 143 YMRTGSCKFGVACKFHH 159
+ TGSC G CK H
Sbjct: 240 FAATGSCPDGAKCKLQH 256
>gi|156357309|ref|XP_001624163.1| predicted protein [Nematostella vectensis]
gi|156210922|gb|EDO32063.1| predicted protein [Nematostella vectensis]
Length = 70
Score = 42.7 bits (99), Expect = 0.37, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + Q L + +C + G C +GP
Sbjct: 9 CRPFEESGTCKYGDKCQFAHGYHELRQ--------LARHPKYKTELCRTFHTIGFCPYGP 60
Query: 316 TCRFDH 321
C F H
Sbjct: 61 RCHFIH 66
>gi|159117685|ref|XP_001709062.1| Zinc finger domain [Giardia lamblia ATCC 50803]
gi|157437177|gb|EDO81388.1| Zinc finger domain protein [Giardia lamblia ATCC 50803]
Length = 193
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
SI N+ S RN L G ++SS + + +C + G C YG C+F
Sbjct: 2 SIVMRNMESSLRNAESLAVGQ-----TSSSTGAKYKTEFCNC--FAEFGRCDYGDRCQFA 54
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
H E SN+ + L C+++ +G C +G C F H
Sbjct: 55 HSMEEFQHRRRSNVKDMKL--------CTDFITHGYCPYGRRCNFLH 93
>gi|392332511|ref|XP_003752602.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Rattus norvegicus]
Length = 247
Score = 42.7 bits (99), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 61/163 (37%), Gaps = 22/163 (13%)
Query: 180 MGSSVLPSSGLQYAG-------IVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
+G+ LP G+ +G + A G +G + P S ++ +G
Sbjct: 23 LGAQPLPFPGMDKSGTAVCEFFLKAACGKVQLLGGMCPFRHIS-GEKTVVCKHWLRGLCK 81
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AA 285
G Q L P+C +Y G C +C F H P+ +I
Sbjct: 82 KGDQCEFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGF 135
Query: 286 SNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
GPL R + IC NY + G C GP+C+F HP P+
Sbjct: 136 CKHGPLCRHRRTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 177
>gi|388505774|gb|AFK40953.1| unknown [Medicago truncatula]
Length = 37
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 260 MNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP 297
M G CK+G C++HHP++++A A I P GLP RP
Sbjct: 1 MRNGDCKFGLACRYHHPRDQVA--ARPLISPFGLPLRP 36
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMR 134
++ G CK+G C+YHHP+D+ A P+ + GLP+R
Sbjct: 1 MRNGDCKFGLACRYHHPRDQVAARPL-ISPFGLPLR 35
>gi|308161222|gb|EFO63678.1| Zinc finger domain-containing protein [Giardia lamblia P15]
Length = 193
Score = 42.4 bits (98), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 15/107 (14%)
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFH 274
SI N+ S RN L G ++SS + + +C + G C YG C+F
Sbjct: 2 SIVMRNIESSLRNVESLAVGQ-----TSSSTGAKYKTEFCNC--FAEFGRCDYGDRCQFA 54
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
H E SN+ + L C+++ +G C +G C F H
Sbjct: 55 HSMEEFQHRRRSNVKDMKL--------CTDFITHGYCPYGRRCNFLH 93
>gi|391331981|ref|XP_003740417.1| PREDICTED: uncharacterized protein LOC100906487 [Metaseiulus
occidentalis]
Length = 485
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H E + L + +C + G+C +GP
Sbjct: 178 CRPFEENGICKYGDKCQFAHGIEELRS--------LARHPKYKTELCRTFHTTGLCPYGP 229
Query: 316 TCRFDH 321
C F H
Sbjct: 230 RCHFIH 235
>gi|393218484|gb|EJD03972.1| hypothetical protein FOMMEDRAFT_133331 [Fomitiporia mediterranea
MF3/22]
Length = 292
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 45/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C+ G C Y HPK++
Sbjct: 99 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKFGYCQAGDECLYAHPKEKK 145
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 146 IECPDYKRGFCKLGPHCPRKHVRRVACQNYL-TGYCPLGPECTRGHPKPD 194
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 6/79 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 308
P+C +Y G C+ G +C + HPKE+ + +GP + C NY +
Sbjct: 119 PECWWYAKFGYCQAGDECLYAHPKEKKIECPDYKRGFCKLGPHCPRKHVRRVACQNY-LT 177
Query: 309 GICKFGPTCRFDHPYAGYP 327
G C GP C HP P
Sbjct: 178 GYCPLGPECTRGHPKPDLP 196
>gi|157119898|ref|XP_001659561.1| hypothetical protein AaeL_AAEL001527 [Aedes aegypti]
gi|108883145|gb|EAT47370.1| AAEL001527-PA, partial [Aedes aegypti]
Length = 312
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 49/191 (25%)
Query: 155 CKFHHPQPSSLGTALPLTG-------NASLGSMGSS----VLPSSGLQYAGIVPAPGWNT 203
CK+ HP P L L + G NA + MG S VLP G VPA N
Sbjct: 15 CKYFHP-PQHLKDQLLINGRNHLALKNAIMQQMGISPGQPVLP-------GQVPAVATNP 66
Query: 204 YMGNI-----------GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPD 252
Y+ ++ G L PT + ++ S+ +G Q ++ A+ Q +P
Sbjct: 67 YLASMPTSTYSPYFPPGHLMPTLLGPADPSAVSQ----VGPVVQQTLVPATQQKIPRSDR 122
Query: 253 QPDCRYYMNTGTCKYG-ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGIC 311
CR +M G CK ++C+F HP++ + ++ +C + ++ G C
Sbjct: 123 LEVCREFMR-GACKRAESECRFAHPQDSVTTHEDGSV-----------TVCMD-AVKGRC 169
Query: 312 KFGPTCRFDHP 322
P CR+ HP
Sbjct: 170 AREP-CRYFHP 179
>gi|332024832|gb|EGI65020.1| Putative E3 ubiquitin-protein ligase makorin-1 [Acromyrmex
echinatior]
Length = 417
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 76/185 (41%), Gaps = 15/185 (8%)
Query: 98 YLKTGTCKYGSTCKYHHPK-DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
Y K GTC+ G+ C+Y H + +RN A S N + + G CKFG C+
Sbjct: 13 YFKNGTCREGNNCRYRHVQGNRNDA---SINEATSTHSSAYIVTCRFFKQGMCKFGSQCR 69
Query: 157 FHHPQPSSLGTALPL--TGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPT 214
F H ++ A+ + T NA+ G S+ SS + A W P + +
Sbjct: 70 FRHNSGTTDSNAIQIDATENAASGQHTSN---SSRNKKTEKRTAEEW-VKAPEFIPTTGS 125
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPD----QPDCRYYMNTGTCKYGAD 270
IAGS+ I + M + A + N + +P C Y TG C+ ++
Sbjct: 126 PIAGSSSIDGMSSTSGTSPSTSMPVSYAQAVNPTGQASSPSLEPLCPYAEATGICR-NSN 184
Query: 271 CKFHH 275
C + H
Sbjct: 185 CTYLH 189
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 4/66 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N GTC+ G +C++ H + ++I + + G+CKFG
Sbjct: 11 CRYFKN-GTCREGNNCRYRHVQ---GNRNDASINEATSTHSSAYIVTCRFFKQGMCKFGS 66
Query: 316 TCRFDH 321
CRF H
Sbjct: 67 QCRFRH 72
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY-----YLKTGTCKYGSTC 110
Y + G C G+NCR+ H QG + + E Y + K G CK+GS C
Sbjct: 13 YFKNGTCREGNNCRYRH----VQGNRNDASINEATSTHSSAYIVTCRFFKQGMCKFGSQC 68
Query: 111 KYHH 114
++ H
Sbjct: 69 RFRH 72
>gi|301617734|ref|XP_002938300.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Xenopus (Silurana)
tropicalis]
Length = 529
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 130 GLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
G +D +CP+Y++TG+C+FG C H PSS T L + + G
Sbjct: 151 GYGTEKDRANCPFYLKTGACRFGERCSRKHNYPSSSQTLLIRSMFVTFG 199
>gi|224143966|ref|XP_002325139.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222866573|gb|EEF03704.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 549
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 23/34 (67%)
Query: 250 RPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQS 283
RP+ D YMN GT K+GA+CKF+HP R Q+
Sbjct: 422 RPEAKDRASYMNIGTYKFGANCKFNHPIRRKNQA 455
>gi|341899233|gb|EGT55168.1| hypothetical protein CAEBREN_30011 [Caenorhabditis brenneri]
Length = 208
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 45/118 (38%), Gaps = 27/118 (22%)
Query: 6 QVKSNAVANQSA----DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGL 61
Q + +ANQ D++ E + R K D+ + C Y+R
Sbjct: 55 QAARSTLANQDPCTIPDDLREELMRQKRKDDAFKTAL--------------CDSYKRNQT 100
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGYYLKTGTCKYGSTCKYHH 114
C YG CRF H + + Q+ P P C + TG CKY + C++ H
Sbjct: 101 CSYGEQCRFAHGVHELRLPQH----PRGRNHPKYKTVLCDKFSTTGNCKYETRCQFIH 154
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 36/102 (35%), Gaps = 28/102 (27%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y TC YG C+F H + L LP P +C +S
Sbjct: 92 CDSYKRNQTCSYGEQCRFAH-----------GVHELRLPQHPRGRNHPKYKTVLCDKFST 140
Query: 308 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA 349
G CK+ C+F H P L L S ++N+ A
Sbjct: 141 TGNCKYETRCQFIHKLVN---------PTLLALASGMLNNTA 173
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 32/127 (25%)
Query: 82 YREELPERNGQPD------CGYYLKTGTCKYGSTCKY----------HHPKDRNGAGPVS 125
REEL + + D C Y + TC YG C++ HP+ RN P
Sbjct: 73 LREELMRQKRKDDAFKTALCDSYKRNQTCSYGEQCRFAHGVHELRLPQHPRGRNH--PKY 130
Query: 126 FNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHP--QPSSLGTALPLTGN--ASLGSMG 181
+L C + TG+CK+ C+F H P+ L A + N +++GS
Sbjct: 131 KTVL----------CDKFSTTGNCKYETRCQFIHKLVNPTLLALASGMLNNTASAIGSNN 180
Query: 182 SSVLPSS 188
++ + S
Sbjct: 181 AAAINQS 187
>gi|302782009|ref|XP_002972778.1| hypothetical protein SELMODRAFT_173103 [Selaginella moellendorffii]
gi|300159379|gb|EFJ25999.1| hypothetical protein SELMODRAFT_173103 [Selaginella moellendorffii]
Length = 962
Score = 42.4 bits (98), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 16/69 (23%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G+ C+++R G C G+ C F+H + P C ++L C+YG+
Sbjct: 692 GKVQCVYFR-GGFCAKGNGCEFSHSV---------------SSTPVCKFFLSGDGCRYGA 735
Query: 109 TCKYHHPKD 117
C+Y H D
Sbjct: 736 HCRYKHDSD 744
>gi|348680071|gb|EGZ19887.1| hypothetical protein PHYSODRAFT_489640 [Phytophthora sojae]
Length = 536
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + N G C GA C+F H + ++ AS + + + Q++C N+ G C G
Sbjct: 400 CRNFQN-GRCMRGASCRFAHTGQVAQEAPASAVEEVSEYQKRFQSVCYNWQRGGSCVRGD 458
Query: 316 TCRFDH 321
C F H
Sbjct: 459 NCSFQH 464
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 48/125 (38%), Gaps = 17/125 (13%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYY---------- 98
G P C Y++ G C GS CRF H A A G Y+E + P
Sbjct: 343 GAPVCQNYQK-GKCKRGSACRFRHVAAPAGG--YKEPEEDEWKAPVRVALPVAAVAEVAV 399
Query: 99 ---LKTGTCKYGSTCKYHHPKDRNGAGPVS-FNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
+ G C G++C++ H P S + ++ + C + R GSC G
Sbjct: 400 CRNFQNGRCMRGASCRFAHTGQVAQEAPASAVEEVSEYQKRFQSVCYNWQRGGSCVRGDN 459
Query: 155 CKFHH 159
C F H
Sbjct: 460 CSFQH 464
>gi|325182068|emb|CCA16521.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 221
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + T +C YG C+F H + +G +Y+ C +L TG C YGS
Sbjct: 53 CKHFMETSICRYGPKCQFAHGMHELRGVVRHPKYK--------TTRCKTFLTTGKCTYGS 104
Query: 109 TCKYHHPKD 117
C++ H +D
Sbjct: 105 RCRFIHERD 113
>gi|189069316|dbj|BAG36348.1| unnamed protein product [Homo sapiens]
Length = 479
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRRHNFPTSSPTLLIKSMFTTFG 215
>gi|17566742|ref|NP_505069.1| Protein OMA-2 [Caenorhabditis elegans]
gi|351049995|emb|CCD64069.1| Protein OMA-2 [Caenorhabditis elegans]
Length = 393
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 10/73 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQS---AASNIGPLGLPSRPGQAICSNYSMYGICK 312
C+ ++ + TC + +C+F H +E + S A N ++ +C Y+ G+C
Sbjct: 111 CQAWLESKTCAFAENCRFAHGEEELRPSLIEARQN-------NKYRTKLCDKYTTTGLCP 163
Query: 313 FGPTCRFDHPYAG 325
+G C F HP G
Sbjct: 164 YGKRCLFIHPDNG 176
Score = 42.4 bits (98), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 16/71 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNH------PAY--AAQGAQYREELPERNGQPDCGYYLKTGTC 104
C + + C + NCRF H P+ A Q +YR +L C Y TG C
Sbjct: 111 CQAWLESKTCAFAENCRFAHGEEELRPSLIEARQNNKYRTKL--------CDKYTTTGLC 162
Query: 105 KYGSTCKYHHP 115
YG C + HP
Sbjct: 163 PYGKRCLFIHP 173
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 35/84 (41%), Gaps = 11/84 (13%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEK-- 138
++R + PE C +L++ TC + C++ H G + RQ+ K
Sbjct: 97 RHRMQKPESYKTVICQAWLESKTCAFAENCRFAH-------GEEELRPSLIEARQNNKYR 149
Query: 139 --SCPYYMRTGSCKFGVACKFHHP 160
C Y TG C +G C F HP
Sbjct: 150 TKLCDKYTTTGLCPYGKRCLFIHP 173
>gi|384495790|gb|EIE86281.1| hypothetical protein RO3G_10992 [Rhizopus delemar RA 99-880]
Length = 260
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C YG+ C++ A+ AQ + E P+ Q C + KTG+C YG+ C +
Sbjct: 103 CRNWEETGQCRYGTKCQY---AHGAQDLREIERHPKYKTQ-KCRTFHKTGSCPYGARCTF 158
Query: 113 HHP----KDRNGAGPVSF 126
H D + PV F
Sbjct: 159 RHFSLPGDDDHKEEPVMF 176
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +TG C+YG+ C+Y H GA + I P + +K C + +TGSC +G
Sbjct: 103 CRNWEETGQCRYGTKCQYAH-----GAQDLR-EIERHPKYKTQK-CRTFHKTGSCPYGAR 155
Query: 155 CKFHH 159
C F H
Sbjct: 156 CTFRH 160
>gi|324508112|gb|ADY43428.1| Protein TIS11 [Ascaris suum]
Length = 305
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 37/90 (41%), Gaps = 8/90 (8%)
Query: 232 GAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPL 291
G G Q +S+ P+ CR +M+ G C YG C++ H + P+
Sbjct: 39 GNGVQSSTISSQQPKNPKLYKTELCRSWMDHGRCNYGDRCQYAHGEHEKR--------PI 90
Query: 292 GLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+ A C +Y G C +GP C F H
Sbjct: 91 PRHPKYKTAYCQSYHQSGYCPYGPRCHFIH 120
>gi|427781319|gb|JAA56111.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 368
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 65/181 (35%), Gaps = 46/181 (25%)
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
+ A ++Y+ EL C + ++GTCKYG C++ H G L
Sbjct: 146 SVAQNSSRYKTEL--------CRPFEESGTCKYGDKCQFAH-------GGHELRTLARHP 190
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHH--------------PQPSSLGTALPLTGNASLGS 179
+ + C + G C +G C F H P P S AL + SLGS
Sbjct: 191 KYKTELCRTFHTAGFCPYGPRCHFIHNSDESRKNLLTNINPPPPSRPKALSVGSFGSLGS 250
Query: 180 MGSSVLPSSGL-----------------QYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLI 222
G PSS L +A +V +PG+ + P S S+ S
Sbjct: 251 AGDLSPPSSPLYDDPFFAAPPTAFSFSQDFATLVTSPGFGGGSSQVSPFSALSLPESAFQ 310
Query: 223 Y 223
+
Sbjct: 311 F 311
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGDKCQFAH--------GGHELRTLARHPKYKTELCRTFHTAGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|224082348|ref|XP_002306656.1| predicted protein [Populus trichocarpa]
gi|222856105|gb|EEE93652.1| predicted protein [Populus trichocarpa]
Length = 495
Score = 42.4 bits (98), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC + C+ H +PER PDC Y+L+ G C C Y H +
Sbjct: 301 GLC-FNPECKLTHKV-----------IPER--MPDCSYFLQ-GLCT-NKDCPYRHVRVNP 344
Query: 120 GAGPVSFNILGLP------MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 164
A + G +++ CP Y TGSC G CK HHP+ S
Sbjct: 345 NASICEGFLRGYCADVNECLKKHSYVCPTYEATGSCPQGSKCKLHHPKNRS 395
>gi|444705919|gb|ELW47297.1| Thyroid adenoma-associated protein [Tupaia chinensis]
Length = 2301
Score = 42.4 bits (98), Expect = 0.48, Method: Composition-based stats.
Identities = 20/67 (29%), Positives = 28/67 (41%), Gaps = 8/67 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 1896 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 1947
Query: 316 TCRFDHP 322
C F P
Sbjct: 1948 RCHFIPP 1954
>gi|307947822|gb|ABV54790.2| Tis11-like protein [Ilyanassa obsoleta]
Length = 503
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H A + L + +C Y G C +GP
Sbjct: 152 CRPFEESGHCKYGDKCQFAH--------GAHELRNLSRHPKYKTELCRTYHSVGFCPYGP 203
Query: 316 TCRFDH 321
C F H
Sbjct: 204 RCHFIH 209
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 12/73 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YG C+F H A+ + +Y+ EL C Y G C YG
Sbjct: 152 CRPFEESGHCKYGDKCQFAHGAHELRNLSRHPKYKTEL--------CRTYHSVGFCPYGP 203
Query: 109 TCKYHHPKDRNGA 121
C + H +D + A
Sbjct: 204 RCHFIHNEDEHKA 216
>gi|168052362|ref|XP_001778619.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669937|gb|EDQ56514.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1227
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 10/70 (14%)
Query: 95 CGYYLKTGTCKYGSTCKY-HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGV 153
C Y+ +GTC +G C + H+P DR G +P R EK+C + TG CK
Sbjct: 38 CRYWATSGTCFFGDQCNFAHNPADRAATGK------SVPKR--EKACKELLLTGYCKNEK 89
Query: 154 -ACKFHHPQP 162
C+++H P
Sbjct: 90 NGCEYNHEIP 99
>gi|112419061|gb|AAI21895.1| zinc finger CCCH-type containing 3 [Xenopus (Silurana) tropicalis]
Length = 827
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYRE-------------ELPERNGQPDCGYY 98
C++Y R G C G NC F H P A ++ ++ P C Y+
Sbjct: 614 CMYYNRFGKCNRGQNCPFIHDPEKVAVCTRFLRGTCKKTDGTCPFSHKVSKDKMPVCSYF 673
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PM-----RQDEKSCPYYMRTGSCKFG 152
LK G C + + C Y H A + G P+ ++ CP Y R G C G
Sbjct: 674 LK-GIC-HNNDCPYSHVYVSRKAEICKDFLKGYCPLGAKCKKKHTLQCPDYARDGKCPNG 731
Query: 153 VACKFHHPQ 161
CK H Q
Sbjct: 732 AKCKLQHRQ 740
>gi|268535642|ref|XP_002632956.1| C. briggsae CBR-OMA-2 protein [Caenorhabditis briggsae]
Length = 379
Score = 42.4 bits (98), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 95 CQAWLESKTCTFAENCRFAHGEEELRPSL---IEPRQ-NNKYKTKLCDKYTTTGLCPYGK 150
Query: 316 TCRFDHPYAG 325
C F HP G
Sbjct: 151 RCLFIHPDHG 160
>gi|443922894|gb|ELU42246.1| zf-CCCH domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 477
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 50 EPDCLFYRRTGLCGYGSNCRFNH---PAYAAQGAQYREELPERNGQPD--CGYYLKTGTC 104
+P C F++ G C G NCR+ H P + + P P C Y+ G C
Sbjct: 209 KPICRFFQFPGGCRQGINCRYAHNGTPDGSTDASSSGRHPPLDPNTPAGVCRYFWSRGVC 268
Query: 105 KYGSTCKYHHPK-DRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
G++C + H + D G P+ P C + +G C G +CKF H
Sbjct: 269 NRGTSCTHMHQRPDSQGNNPI------FP----RGVCRTFWTSGLCGRGASCKFEH 314
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 12/83 (14%)
Query: 241 SASSQNLPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPG 298
S+S ++ P P+ P CRY+ + G C G C H +R + I P G
Sbjct: 242 SSSGRHPPLDPNTPAGVCRYFWSRGVCNRGTSCT--HMHQRPDSQGNNPIFPRG------ 293
Query: 299 QAICSNYSMYGICKFGPTCRFDH 321
+C + G+C G +C+F+H
Sbjct: 294 --VCRTFWTSGLCGRGASCKFEH 314
>gi|334312211|ref|XP_001382196.2| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Monodelphis domestica]
Length = 516
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 165 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 216
Query: 316 TCRFDH 321
C F H
Sbjct: 217 RCHFIH 222
>gi|238883900|gb|EEQ47538.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 203
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG C Y C+F H + + P S+P C+N+S YG C++G
Sbjct: 144 CASFMKTGVCPYANKCQFAHGENELKHVER----PPKWRSKP----CANWSKYGSCRYGN 195
Query: 316 TCRFDH 321
C F H
Sbjct: 196 RCCFKH 201
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C Y + C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 144 CASFMKTGVCPYANKCQF---AHGENELKHVERPPKWRSKP-CANWSKYGSCRYGNRCCF 199
Query: 113 HH 114
H
Sbjct: 200 KH 201
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++KTG C Y + C++ H G + P + K C + + GSC++G
Sbjct: 144 CASFMKTGVCPYANKCQFAH-------GENELKHVERPPKWRSKPCANWSKYGSCRYGNR 196
Query: 155 CKFHH 159
C F H
Sbjct: 197 CCFKH 201
>gi|348673356|gb|EGZ13175.1| hypothetical protein PHYSODRAFT_316572 [Phytophthora sojae]
Length = 634
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 11/60 (18%)
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSF--NILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
G C+YG CKY+HP AGPV I +P + C ++ R GSC G CKF H
Sbjct: 94 GICRYGDLCKYYHP-----AGPVVVPPEIQAIP---SSRLCRHFSR-GSCAQGSECKFAH 144
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ G C+YG CK++HP A + P + + P +C ++S G C G
Sbjct: 88 CRGFI-AGICRYGDLCKYYHP-------AGPVVVPPEIQAIPSSRLCRHFS-RGSCAQGS 138
Query: 316 TCRFDH 321
C+F H
Sbjct: 139 ECKFAH 144
>gi|350276194|ref|NP_001037949.3| zinc finger CCCH domain-containing protein 3 [Xenopus (Silurana)
tropicalis]
gi|62467681|gb|AAX84027.1| Smad-interacting and CPSF-like protein [Xenopus (Silurana)
tropicalis]
Length = 827
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 49/129 (37%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYRE-------------ELPERNGQPDCGYY 98
C++Y R G C G NC F H P A ++ ++ P C Y+
Sbjct: 614 CMYYNRFGKCNRGQNCPFIHDPEKVAVCTRFLRGTCKKTDGTCPFSHKVSKDKMPVCSYF 673
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PM-----RQDEKSCPYYMRTGSCKFG 152
LK G C + + C Y H A + G P+ ++ CP Y R G C G
Sbjct: 674 LK-GIC-HNNDCPYSHVYVSRKAEICKDFLKGYCPLGAKCKKKHTLQCPDYARDGKCPNG 731
Query: 153 VACKFHHPQ 161
CK H Q
Sbjct: 732 AKCKLQHRQ 740
>gi|344231854|gb|EGV63733.1| hypothetical protein CANTEDRAFT_113770 [Candida tenuis ATCC 10573]
Length = 235
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 15/78 (19%)
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
Y+ EL CG ++K C YG+ C++ H G + P K C
Sbjct: 171 YKTEL--------CGSFMKNSYCPYGNKCQFAH-------GECELKRVERPSNWRSKPCA 215
Query: 142 YYMRTGSCKFGVACKFHH 159
+ R GSC++G C F H
Sbjct: 216 NWSRFGSCRYGNRCCFKH 233
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M C YG C+F H + + + P S+P C+N+S +G C++G
Sbjct: 176 CGSFMKNSYCPYGNKCQFAHGECELKRVER----PSNWRSKP----CANWSRFGSCRYGN 227
Query: 316 TCRFDH 321
C F H
Sbjct: 228 RCCFKH 233
>gi|324521953|gb|ADY47962.1| Tristetraprolin [Ascaris suum]
Length = 203
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +TG C YG CKF H +E + + + P R A C Y + G C +G
Sbjct: 59 CRAWTDTGRCNYGNKCKFAHGEEDLRKLPPEPVKVYNNP-RYRTAPCLKYRLLGSCPYGD 117
Query: 316 TCRFDH 321
C + H
Sbjct: 118 RCSYIH 123
>gi|297303397|ref|XP_001116975.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Macaca mulatta]
Length = 479
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 158 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 209
>gi|432851674|ref|XP_004067028.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Oryzias latipes]
Length = 591
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
N PV+ N +D +CP++++TG+C+FG C H P+S T +
Sbjct: 156 NPEAPVNMNFENYGTERDVANCPFFLKTGACRFGERCSRKHVYPTSSPTLM 206
>gi|145505017|ref|XP_001438475.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405647|emb|CAK71078.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 19/100 (19%)
Query: 69 RFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNI 128
+FN+ + + Q+ EE ++ C + TG+CK+GS C Y H G +
Sbjct: 42 KFNN---SLEKKQFIEEYTKKKKTELCKNFTLTGSCKFGSNCSYAH-----GQSEL---- 89
Query: 129 LGLP---MRQDEKS--CPYYMRTGSCKFGVACKFHHPQPS 163
LP + Q+ K+ C ++ G C +G C++ HP+ S
Sbjct: 90 --LPKAHLHQNYKTKPCKNFLNYGWCNYGSRCQYIHPENS 127
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + TG+CK+G++C + H + + A + ++P C N+ YG C +G
Sbjct: 65 CKNFTLTGSCKFGSNCSYAHGQSELLPKAHLH---QNYKTKP----CKNFLNYGWCNYGS 117
Query: 316 TCRFDHP 322
C++ HP
Sbjct: 118 RCQYIHP 124
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 13/80 (16%)
Query: 43 PYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-----CGY 97
Y + C + TG C +GSNC + H E LP+ + + C
Sbjct: 55 EYTKKKKTELCKNFTLTGSCKFGSNCSYAHGQ--------SELLPKAHLHQNYKTKPCKN 106
Query: 98 YLKTGTCKYGSTCKYHHPKD 117
+L G C YGS C+Y HP++
Sbjct: 107 FLNYGWCNYGSRCQYIHPEN 126
>gi|410927364|ref|XP_003977119.1| PREDICTED: uncharacterized protein LOC101065621 [Takifugu rubripes]
Length = 415
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 313
CR + TGTCKYG+ C+F H + + GL P C + +G C +
Sbjct: 153 CRGFQETGTCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 202
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 203 GSRCHFIH 210
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ TG C YGS C+F H +G YR P+ +P C + G C YGS C +
Sbjct: 153 CRGFQETGTCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CRTFYNFGYCPYGSRCHF 208
Query: 113 HHPKDRNGAGPVS 125
H +D+ G ++
Sbjct: 209 IH-EDKVSGGSLT 220
>gi|356554654|ref|XP_003545659.1| PREDICTED: uncharacterized protein LOC100802468 [Glycine max]
Length = 2002
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 25/129 (19%)
Query: 53 CLFYRRTGLCGY-GSNCRFNH-PAYAAQGAQY-------------REELPERNGQPDCGY 97
C F+ R G C G C + H P+ A ++ + +PER PDC Y
Sbjct: 1754 CQFFTRFGKCNKDGGKCPYIHDPSKIAVCTKFLNGLCSTPNCKLTHKVIPER--MPDCSY 1811
Query: 98 YLKTGTCKYGSTCKYHH----PKDRNGAGPVS-FNILGLPMRQDEK-SCPYYMRTGSCKF 151
+L+ G C C Y H PK G + + G R+ CP + TG+C
Sbjct: 1812 FLQ-GLCS-NRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCPTFEETGTCTQ 1869
Query: 152 GVACKFHHP 160
G CK HHP
Sbjct: 1870 GTKCKLHHP 1878
>gi|396473249|ref|XP_003839300.1| hypothetical protein LEMA_P029730.1 [Leptosphaeria maculans JN3]
gi|312215869|emb|CBX95821.1| hypothetical protein LEMA_P029730.1 [Leptosphaeria maculans JN3]
Length = 578
Score = 42.0 bits (97), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 26/40 (65%), Gaps = 1/40 (2%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHP-KDRNGAG 122
E+L E+ G+ C +L+TG CK+ + C+Y HP D+ G G
Sbjct: 499 EKLAEQQGKKTCETWLRTGRCKFSNKCRYAHPAADKGGEG 538
>gi|326918190|ref|XP_003205374.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Meleagris gallopavo]
Length = 953
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNGQ------------PDCGYY 98
C++Y R G C G NC + H P A ++ R + +G+ P C Y+
Sbjct: 694 CMYYNRFGKCNRGENCPYIHDPEKVAVCTRFLRGTCKKTDGKCPFSHKVSKDKMPVCSYF 753
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PMRQDEKS-----CPYYMRTGSCKFG 152
LK G C S C Y H A + G PM + K CP + + G C G
Sbjct: 754 LK-GICN-NSNCPYSHVYVSRKAEVCQDFLKGYCPMGEKCKKKHTLVCPDFAKKGICPRG 811
Query: 153 VACKFHHPQ 161
CK HP+
Sbjct: 812 ACCKLLHPK 820
>gi|2833265|sp|Q15695.2|U2AFL_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 1; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 1; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 1
gi|1293653|gb|AAA98669.1| U2AFBPL [Homo sapiens]
Length = 479
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 215
>gi|149246628|ref|XP_001527739.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447693|gb|EDK42081.1| hypothetical protein LELG_00259 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 545
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 43/108 (39%), Gaps = 15/108 (13%)
Query: 20 IEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ- 78
+EE W I+ +GG S +P+C +Y RTG+C G++C + H +
Sbjct: 200 MEELKWNDDIYKKHQGGYYKVCSRKIKTRSKPNCRYYTRTGICQRGASCNYFHDQLKIKI 259
Query: 79 ------------GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
P + P C Y+L+ G C + C+Y H
Sbjct: 260 CPHFLNDKCIGNSMCLLSHRPNEHNTPMCRYFLQ-GNCS-NTRCRYMH 305
>gi|332223957|ref|XP_003261134.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Nomascus
leucogenys]
Length = 478
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|71896131|ref|NP_001026756.1| zinc finger CCCH domain-containing protein 3 [Gallus gallus]
gi|60098725|emb|CAH65193.1| hypothetical protein RCJMB04_7c5 [Gallus gallus]
Length = 956
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNGQ------------PDCGYY 98
C++Y R G C G NC + H P A ++ R + +G+ P C Y+
Sbjct: 694 CMYYNRFGKCNRGENCPYIHDPEKVAVCTRFLRGTCKKTDGKCPFSHKVSKDKMPVCSYF 753
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PMRQDEKS-----CPYYMRTGSCKFG 152
LK G C S C Y H A + G PM + K CP + + G C G
Sbjct: 754 LK-GICN-NSNCPYSHVYVSRKAEVCQDFLKGYCPMGEKCKKKHTLVCPDFAKKGICPRG 811
Query: 153 VACKFHHPQ 161
CK HP+
Sbjct: 812 ACCKLLHPK 820
>gi|355757207|gb|EHH60732.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
fascicularis]
Length = 467
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 146 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 197
>gi|336365876|gb|EGN94225.1| hypothetical protein SERLA73DRAFT_78143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336378558|gb|EGO19716.1| hypothetical protein SERLADRAFT_453661 [Serpula lacrymans var.
lacrymans S7.9]
Length = 304
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C ++ K G C G C Y HPK+R
Sbjct: 101 GLCKKGDACEFLHEYNLRR-------------MPECWWFAKYGYCSAGDECLYAHPKERR 147
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ TG C G C HP+P
Sbjct: 148 VECPDYKRGFCKLGPTCPRKHVRRVACQLYL-TGICPLGPDCPRGHPKPD 196
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL----PSRPGQAICSNYSMYG 309
P+C ++ G C G +C + HPKER + G L P + + + + G
Sbjct: 121 PECWWFAKYGYCSAGDECLYAHPKERRVECPDYKRGFCKLGPTCPRKHVRRVACQLYLTG 180
Query: 310 ICKFGPTCRFDHPYAGYP 327
IC GP C HP P
Sbjct: 181 ICPLGPDCPRGHPKPDLP 198
>gi|1125020|dbj|BAA08532.1| U2AF1-RS1 [Homo sapiens]
Length = 479
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 215
>gi|355691520|gb|EHH26705.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2 [Macaca
mulatta]
Length = 472
Score = 42.0 bits (97), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 157 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 208
>gi|4827046|ref|NP_005080.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Homo sapiens]
gi|2833266|sp|Q15696.2|U2AFM_HUMAN RecName: Full=U2 small nuclear ribonucleoprotein auxiliary factor
35 kDa subunit-related protein 2; AltName: Full=CCCH
type zinc finger, RNA-binding motif and serine/arginine
rich protein 2; AltName: Full=Renal carcinoma antigen
NY-REN-20; AltName: Full=U2(RNU2) small nuclear RNA
auxiliary factor 1-like 2; AltName: Full=U2AF35-related
protein; Short=URP
gi|1808582|dbj|BAA08533.1| U2AF1-RS2 [Homo sapiens]
gi|109731267|gb|AAI13455.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|109731281|gb|AAI13481.1| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
gi|119619306|gb|EAW98900.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_a
[Homo sapiens]
gi|313883686|gb|ADR83329.1| zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [synthetic construct]
Length = 482
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|332860347|ref|XP_520951.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Pan
troglodytes]
Length = 478
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|297709488|ref|XP_002831462.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pongo abelii]
Length = 478
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|127797587|gb|AAH50451.2| Zinc finger (CCCH type), RNA-binding motif and serine/arginine rich
2 [Homo sapiens]
Length = 482
Score = 42.0 bits (97), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|402909571|ref|XP_003917490.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Papio anubis]
Length = 480
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|395736068|ref|XP_002815836.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pongo abelii]
Length = 489
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 174 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 225
>gi|145533841|ref|XP_001452665.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420364|emb|CAK85268.1| unnamed protein product [Paramecium tetraurelia]
Length = 198
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 28/67 (41%), Gaps = 7/67 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+Y+ C YG C F H + I Q +P +C NY G C +G
Sbjct: 97 CKYWAIEDYCPYGQQCAFAHGQHEIRQKT-------HVPHNYKTQVCKNYITIGYCCYGE 149
Query: 316 TCRFDHP 322
C+F HP
Sbjct: 150 RCQFKHP 156
>gi|355758818|gb|EHH61525.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 1 [Macaca
fascicularis]
Length = 472
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 157 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 208
>gi|344288823|ref|XP_003416146.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Loxodonta
africana]
Length = 497
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 316 TCRFDH 321
C F H
Sbjct: 213 RCHFIH 218
>gi|296234985|ref|XP_002762699.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Callithrix jacchus]
Length = 474
Score = 42.0 bits (97), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|384488209|gb|EIE80389.1| hypothetical protein RO3G_05094 [Rhizopus delemar RA 99-880]
Length = 277
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C YG+ C++ A+ AQ + E P+ Q C + KTG+C YG+ C +
Sbjct: 107 CRNWEETGQCRYGTKCQY---AHGAQDLREIERHPKYKTQ-KCRTFHKTGSCPYGARCTF 162
Query: 113 HH 114
H
Sbjct: 163 RH 164
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + +TG C+YG+ C+Y H GA + I P + +K C + +TGSC +G
Sbjct: 107 CRNWEETGQCRYGTKCQYAH-----GAQDLR-EIERHPKYKTQK-CRTFHKTGSCPYGAR 159
Query: 155 CKFHH 159
C F H
Sbjct: 160 CTFRH 164
>gi|255718555|ref|XP_002555558.1| KLTH0G12100p [Lachancea thermotolerans]
gi|238936942|emb|CAR25121.1| KLTH0G12100p [Lachancea thermotolerans CBS 6340]
Length = 279
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 43/106 (40%), Gaps = 20/106 (18%)
Query: 67 NCRFNHPAYAAQGAQYREELP-ERNGQPD------------CGYYLKTGTCKYGSTCKYH 113
C PA Q ++ E P ++ GQP C + G+CKYG C++
Sbjct: 141 ECVAEKPARKQQSSRKPGEQPAQQQGQPHEKCNKVLYKTELCESFSTKGSCKYGHNCQFA 200
Query: 114 HPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
H G + F R K C +MRTGSC +G C F H
Sbjct: 201 H-----GLQELKFKERNNKFR--TKPCVNWMRTGSCPYGQRCCFKH 239
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 4/67 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YG NC+F H Q +++E + +P C +++TG+C YG C +
Sbjct: 182 CESFSTKGSCKYGHNCQFAH---GLQELKFKERNNKFRTKP-CVNWMRTGSCPYGQRCCF 237
Query: 113 HHPKDRN 119
H D++
Sbjct: 238 KHGSDQD 244
>gi|170092415|ref|XP_001877429.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647288|gb|EDR11532.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 2289
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA------ICSNYS 306
+P C+Y C+ GA+CKF H I+ S + P G S P ++ +C+ Y
Sbjct: 4 RPTCKYLNTPRGCRQGANCKFSHDSSAISNSPVAR--PSGSQSSPARSHNTPAGVCNFYW 61
Query: 307 MYGICKFGPTCRFDH 321
G C G CRF H
Sbjct: 62 SRGDCNRGFECRFKH 76
>gi|397467387|ref|XP_003805402.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Pan paniscus]
Length = 478
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|149034888|gb|EDL89608.1| rCG42591, isoform CRA_c [Rattus norvegicus]
Length = 180
Score = 42.0 bits (97), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAA---SNIGPLGLPSRPGQAICSNYSMYGICK 312
C++++ G CK G C+F H + S GPL + IC NY + G C
Sbjct: 36 CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGPLCRHRHTRRVICVNY-LVGFCP 93
Query: 313 FGPTCRFDHPYAGYPI 328
GP+C+F HP P+
Sbjct: 94 EGPSCKFMHPRFELPM 109
>gi|326435888|gb|EGD81458.1| DUS3L protein [Salpingoeca sp. ATCC 50818]
Length = 612
Score = 42.0 bits (97), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 10/65 (15%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT-GSCKFGV 153
C + K+G C YG CK+ H D+ L + CP++ R G C+FG+
Sbjct: 102 CLAFAKSGACSYGDKCKFEHDFDK---------YLQTKPPDVDAPCPFWEREGGKCRFGI 152
Query: 154 ACKFH 158
C+F+
Sbjct: 153 MCRFY 157
>gi|426395275|ref|XP_004063900.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Gorilla gorilla
gorilla]
Length = 461
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 146 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 197
>gi|332223959|ref|XP_003261135.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 2 [Nomascus
leucogenys]
Length = 482
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|119619307|gb|EAW98901.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_b
[Homo sapiens]
Length = 446
Score = 42.0 bits (97), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 156 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 207
>gi|17540280|ref|NP_502930.1| Protein F38C2.7 [Caenorhabditis elegans]
gi|3876907|emb|CAB05193.1| Protein F38C2.7 [Caenorhabditis elegans]
Length = 203
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCK 111
C F+RR C YG C+F H + + Q + RN + C + TG CKYG C+
Sbjct: 94 CGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRN--HRNYKTVLCNNFSTTGHCKYGIRCQ 151
Query: 112 YHH 114
+ H
Sbjct: 152 FIH 154
>gi|428177122|gb|EKX46003.1| hypothetical protein GUITHDRAFT_108044 [Guillardia theta CCMP2712]
Length = 446
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 66/154 (42%), Gaps = 16/154 (10%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
C F+ R G C +G +CRF H P+ A + Q ++ + +P+ L+
Sbjct: 36 CDFWSRNGNCVHGEHCRFLHDPSVAPRPLQL--DIRSKRSRPNVQSLLQLHKGNDNDLIS 93
Query: 112 YHHPKDRNGAGPVSFNIL----GLPM-RQDEKSCPYYMRTGSCKFGVACKFHH------P 160
P S N++ P ++ ++ C ++++ G+C+ AC+F H
Sbjct: 94 LDFPPPNINLNATSPNMILANDTRPFSKKKQRVCDFFLKYGNCRQQEACRFLHLRLEDVV 153
Query: 161 QPSSLGTALPLTGNASLGSM--GSSVLPSSGLQY 192
Q ++L P N S G + G S L S +Q+
Sbjct: 154 QQNALQIVAPEHHNHSFGDLPQGQSALHSFEVQH 187
>gi|402872265|ref|XP_003900044.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Papio
anubis]
Length = 485
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 170 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 221
>gi|397512928|ref|XP_003826785.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Pan
paniscus]
gi|397512932|ref|XP_003826787.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 3 [Pan
paniscus]
gi|397512934|ref|XP_003826788.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 4 [Pan
paniscus]
gi|410039576|ref|XP_003950650.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like [Pan troglodytes]
Length = 489
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 174 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 225
>gi|126138312|ref|XP_001385679.1| hypothetical protein PICST_36883 [Scheffersomyces stipitis CBS
6054]
gi|126092957|gb|ABN67650.1| zinc finger-containing protein [Scheffersomyces stipitis CBS 6054]
Length = 223
Score = 42.0 bits (97), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C+ + + G+C YG+ C+F A+ + E P+ +P C + K G+C+YG+ C +
Sbjct: 164 CVSFMKMGICPYGNKCQF---AHGENELKTVERPPKWRSKP-CANWAKLGSCRYGNRCCF 219
Query: 113 HH 114
H
Sbjct: 220 KH 221
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++K G C YG+ C++ H G + P + K C + + GSC++G
Sbjct: 164 CVSFMKMGICPYGNKCQFAH-------GENELKTVERPPKWRSKPCANWAKLGSCRYGNR 216
Query: 155 CKFHH 159
C F H
Sbjct: 217 CCFKH 221
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 39/103 (37%), Gaps = 23/103 (22%)
Query: 219 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKE 278
SN Y S+NQ + L C +M G C YG C+F H +
Sbjct: 142 SNFAYHSKNQQQVNTQLYKTEL---------------CVSFMKMGICPYGNKCQFAHGEN 186
Query: 279 RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+ P S+P C+N++ G C++G C F H
Sbjct: 187 ELKTVER----PPKWRSKP----CANWAKLGSCRYGNRCCFKH 221
>gi|57526296|ref|NP_001009765.1| tristetraprolin [Ovis aries]
gi|54036437|sp|Q6S9E0.1|TTP_SHEEP RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Zinc finger
protein 36 homolog; Short=Zfp-36
gi|39777543|gb|AAR31111.1| tristetraprolin [Ovis aries]
Length = 325
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
CR + +G C+YGA C+F H +G L PSR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|308474554|ref|XP_003099498.1| hypothetical protein CRE_01134 [Caenorhabditis remanei]
gi|308266687|gb|EFP10640.1| hypothetical protein CRE_01134 [Caenorhabditis remanei]
Length = 356
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 83 CQAWLESKTCTFAENCRFAHGEEELR---PSFIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 138
Query: 316 TCRFDHPYAG 325
C F HP G
Sbjct: 139 RCLFIHPDHG 148
>gi|5731751|emb|CAA71245.2| CTH1 protein [Cyprinus carpio]
Length = 327
Score = 42.0 bits (97), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 256 CRYYMNTGTCKYGADCKFHHPK---ERIAQSAASNIGPLGLPS--RPGQAICSNYSMYGI 310
CR + G C +G C F H + E P+ +P A+C +S +G
Sbjct: 137 CRTFRAFGVCPFGTRCHFLHVEGGSESDGGEEEQTCQPMSQSQEWKPRGALCRTFSAFGF 196
Query: 311 CKFGPTCRFDH 321
C +G CRF H
Sbjct: 197 CLYGTRCRFQH 207
Score = 41.6 bits (96), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 16/121 (13%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELP--ERNGQPDCGYYLKTGTCKYGSTC 110
C Y G C YG+ C F H +E+ P +R C + G C +G+ C
Sbjct: 101 CRTYHTAGYCVYGTRCLFVH--------NLKEQRPVRQRCRNVPCRTFRAFGVCPFGTRC 152
Query: 111 KYHHPKDRNGAGPVSFNILGLPMRQDEKS------CPYYMRTGSCKFGVACKFHHPQPSS 164
+ H + + + PM Q ++ C + G C +G C+F H P+S
Sbjct: 153 HFLHVEGGSESDGGEEEQTCQPMSQSQEWKPRGALCRTFSAFGFCLYGTRCRFQHGLPNS 212
Query: 165 L 165
+
Sbjct: 213 I 213
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 27/114 (23%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYA----AQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C Y C+F H + ++ +Y+ EL C Y G C YG+
Sbjct: 63 CSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYKTEL--------CRTYHTAGYCVYGT 114
Query: 109 TCKY-HHPKDRNGAGPVSFNILGLPMRQDEKS--CPYYMRTGSCKFGVACKFHH 159
C + H+ K++ P+RQ ++ C + G C FG C F H
Sbjct: 115 RCLFVHNLKEQR------------PVRQRCRNVPCRTFRAFGVCPFGTRCHFLH 156
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 67/199 (33%), Gaps = 50/199 (25%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQ---D 136
+Y+ EL C Y +TGTCKY C++ H + L +P R
Sbjct: 56 TRYKTEL--------CSRYAETGTCKYAERCQFAH----------GLHDLHVPSRHPKYK 97
Query: 137 EKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIV 196
+ C Y G C +G C F H +L P+ +P + G+
Sbjct: 98 TELCRTYHTAGYCVYGTRCLFVH----NLKEQRPVRQRC-------RNVPCRTFRAFGVC 146
Query: 197 PAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDC 256
P ++ G S + G G + SQ+ +P C
Sbjct: 147 PFGTRCHFLHVEG--------------GSESDG----GEEEQTCQPMSQSQEWKPRGALC 188
Query: 257 RYYMNTGTCKYGADCKFHH 275
R + G C YG C+F H
Sbjct: 189 RTFSAFGFCLYGTRCRFQH 207
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 63 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 111
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 112 YGTRCLFVH 120
Score = 38.5 bits (88), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 28/72 (38%), Gaps = 14/72 (19%)
Query: 256 CRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
CR Y G C YG C F H ++R + N+ C + +G+C F
Sbjct: 101 CRTYHTAGYCVYGTRCLFVHNLKEQRPVRQRCRNVP------------CRTFRAFGVCPF 148
Query: 314 GPTCRFDHPYAG 325
G C F H G
Sbjct: 149 GTRCHFLHVEGG 160
>gi|388856515|emb|CCF49821.1| uncharacterized protein [Ustilago hordei]
Length = 681
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 14/70 (20%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
P C +Y+ G C+ G C + H + L G IC N+S YG C+
Sbjct: 390 PHCVHYLRAGKCRNGKQCFYTHSDK--------------LKDGTGTKICRNFSDYGWCER 435
Query: 314 GPTCRFDHPY 323
G C H Y
Sbjct: 436 GKDCEERHTY 445
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 12/103 (11%)
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG------------LPM 133
L + + C ++ KTG CK G +C Y H + P + G P
Sbjct: 326 LDAKKARTLCTFFNKTGQCKRGLSCPYLHDSSKIALCPKVLHPSGCTLLKGTCPLSHTPR 385
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
+ C +Y+R G C+ G C + H GT + N S
Sbjct: 386 AERVPHCVHYLRAGKCRNGKQCFYTHSDKLKDGTGTKICRNFS 428
>gi|170086075|ref|XP_001874261.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651813|gb|EDR16053.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 835
Score = 41.6 bits (96), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 11/79 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+YGA C+F H ++ + + + + IC + + G C +G
Sbjct: 532 CRSWEEKGTCRYGAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 583
Query: 316 TCRFDH---PYAGYPINYG 331
C F H P +G P G
Sbjct: 584 RCCFIHTELPSSGAPPTAG 602
>gi|253735916|gb|ACT34179.1| ZFP36 [Ovis aries]
Length = 325
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
CR + +G C+YGA C+F H +G L PSR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQPSRHPKYKTELCHKFYLQGRCP 155
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|332860349|ref|XP_003317416.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 isoform 1 [Pan
troglodytes]
Length = 482
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 159 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 210
>gi|324510740|gb|ADY44489.1| Tristetraprolin [Ascaris suum]
Length = 455
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 11/72 (15%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
C+ ++ C + +C+F H +E + P +P + + +C Y++ G+C
Sbjct: 193 CQAWVKNNRCNFAENCRFAHGEEELR--------PCKIPIKNAKYKTKLCDKYTLTGLCP 244
Query: 313 FGPTCRFDHPYA 324
+G C F HP A
Sbjct: 245 YGNRCLFIHPDA 256
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 36/88 (40%), Gaps = 16/88 (18%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA-------AQGAQYREELPERNGQ 92
+ SP P C + + C + NCRF H + A+Y+ +L
Sbjct: 180 RISPKPDIYKTEMCQAWVKNNRCNFAENCRFAHGEEELRPCKIPIKNAKYKTKL------ 233
Query: 93 PDCGYYLKTGTCKYGSTCKYHHPKDRNG 120
C Y TG C YG+ C + HP D NG
Sbjct: 234 --CDKYTLTGLCPYGNRCLFIHP-DANG 258
>gi|294658177|ref|XP_460514.2| DEHA2F03410p [Debaryomyces hansenii CBS767]
gi|202952931|emb|CAG88827.2| DEHA2F03410p [Debaryomyces hansenii CBS767]
Length = 287
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C Y+ G C YG C+F H + + + P S+P C+N+S +G C++G
Sbjct: 228 CASYIKMGICPYGNKCQFAHGENELKSVSR----PPKWRSKP----CANWSKFGSCRYGN 279
Query: 316 TCRFDH 321
C F H
Sbjct: 280 RCCFKH 285
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y+K G C YG+ C++ H G + P + K C + + GSC++G
Sbjct: 228 CASYIKMGICPYGNKCQFAH-------GENELKSVSRPPKWRSKPCANWSKFGSCRYGNR 280
Query: 155 CKFHH 159
C F H
Sbjct: 281 CCFKH 285
>gi|196016786|ref|XP_002118243.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
gi|190579144|gb|EDV19246.1| hypothetical protein TRIADDRAFT_33882 [Trichoplax adhaerens]
Length = 102
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C Y G C +GP
Sbjct: 41 CRPFEESGTCKYGDKCQFAH--------GIHELRALARHPKYKTELCRTYHTIGFCPYGP 92
Query: 316 TCRFDH 321
C F H
Sbjct: 93 RCHFIH 98
>gi|119619308|gb|EAW98902.1| U2(RNU2) small nuclear RNA auxiliary factor 1-like 2, isoform CRA_c
[Homo sapiens]
Length = 344
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 21 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 72
>gi|402872263|ref|XP_003900043.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 1 [Papio
anubis]
Length = 500
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 185 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 236
>gi|363751853|ref|XP_003646143.1| hypothetical protein Ecym_4262 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889778|gb|AET39326.1| hypothetical protein Ecym_4262 [Eremothecium cymbalariae
DBVPG#7215]
Length = 294
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + TG CKY C+F H + SN ++P C N+S G C++G
Sbjct: 183 CESFATTGFCKYATKCQFAHGLHELKFKERSN----KFRTKP----CINWSTTGYCRYGK 234
Query: 316 TCRFDH 321
C F H
Sbjct: 235 RCCFKH 240
>gi|347840920|emb|CCD55492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1169
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 16/108 (14%)
Query: 247 LPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
LP D P C Y+ + +C G DCK H +A N L + ++PG C
Sbjct: 450 LPASVDGPQWVCYYWYHDNSCTKGVDCKMAH--------SADN--DLRVAAKPGSVTC-R 498
Query: 305 YSMYGICKFGPTCRFDH--PYAGYPINYGLSLPPLSILDSSLMNHQAI 350
Y + G C+ G C F H P+ G I+Y S P +++DS + +++
Sbjct: 499 YWIQGHCRNGIDCFFAHESPHNGRSISYT-SQPYSNVIDSEPLVEKSV 545
>gi|397512930|ref|XP_003826786.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1-like isoform 2 [Pan
paniscus]
Length = 504
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 189 PVDFRV----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 240
>gi|441598673|ref|XP_004087475.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
gi|441598677|ref|XP_004087476.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 [Nomascus leucogenys]
Length = 492
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 174 PVDFRV----MEKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFG 225
>gi|410926251|ref|XP_003976592.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 398
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 313
CR Y +GTCKYG C+F H + + G+ P +C + G C +
Sbjct: 157 CRTYEESGTCKYGTKCQFAHGLDELR----------GISRHPKYKTELCRTFHTIGFCPY 206
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 207 GARCHFVH 214
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 31/75 (41%), Gaps = 12/75 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C YG+ C+F H +G +Y+ EL C + G C YG+
Sbjct: 157 CRTYEESGTCKYGTKCQFAHGLDELRGISRHPKYKTEL--------CRTFHTIGFCPYGA 208
Query: 109 TCKYHHPKDRNGAGP 123
C + H D P
Sbjct: 209 RCHFVHNADEASPSP 223
>gi|395526914|ref|XP_003765599.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Sarcophilus harrisii]
Length = 470
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
+D+ +CP+Y++TGSC+FG C H P+S T L + + G
Sbjct: 167 KDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMFITFG 210
>gi|213404030|ref|XP_002172787.1| cps3 [Schizosaccharomyces japonicus yFS275]
gi|212000834|gb|EEB06494.1| cps3 [Schizosaccharomyces japonicus yFS275]
Length = 499
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+R+ G C G NC F+H +L + + C Y+LK G CK+GS C
Sbjct: 41 CKFFRQ-GTCTSGKNCVFSH------------DLEPNSEKTVCKYFLK-GNCKFGSKCAL 86
Query: 113 HH 114
H
Sbjct: 87 DH 88
>gi|118344116|ref|NP_001071879.1| zinc finger protein [Ciona intestinalis]
gi|70571730|dbj|BAE06810.1| zinc finger protein [Ciona intestinalis]
Length = 380
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 38/102 (37%), Gaps = 17/102 (16%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H K + + + + +C Y G C +GP
Sbjct: 136 CRPFEENGKCKYGDKCQFAHGKHELRR--------MVRHPKYKTELCRTYHTSGFCPYGP 187
Query: 316 TCRFDHPYAGYPINYGLSLP---------PLSILDSSLMNHQ 348
C F H I + P P+ I + L HQ
Sbjct: 188 RCHFIHNQEDVGIAKKQTQPTRIQSQTSVPVKINNRQLSQHQ 229
>gi|332221469|ref|XP_003259883.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 1 isoform 5 [Nomascus
leucogenys]
Length = 507
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV F + M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 189 PVDFRV----MEKDRANCPFYSKTGACRFGHRCSRKHNFPTSSPTLLIKSMFTTFG 240
>gi|431912731|gb|ELK14749.1| Butyrate response factor 2 [Pteropus alecto]
Length = 446
Score = 41.6 bits (96), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 111 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 162
Query: 316 TCRFDH 321
C F H
Sbjct: 163 RCHFIH 168
>gi|17544434|ref|NP_503017.1| Protein DCT-13 [Caenorhabditis elegans]
gi|5832785|emb|CAB55123.1| Protein DCT-13 [Caenorhabditis elegans]
Length = 205
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 21/111 (18%)
Query: 9 SNAVAN----QSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGY 64
S+A+AN +D + E + RLK + + CL ++R C Y
Sbjct: 64 SSAIANCDPCTISDELREEMMRLKKKEKAFKTSL--------------CLSHKRGKTCIY 109
Query: 65 GSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCKYHH 114
G C+F H + + Q RN + C + TG CKYG+ C++ H
Sbjct: 110 GEACKFAHGVHELRCQQTTRN--HRNYKTVLCDKFTTTGYCKYGARCQFIH 158
>gi|444322576|ref|XP_004181929.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
gi|387514975|emb|CCH62410.1| hypothetical protein TBLA_0H01230 [Tetrapisispora blattae CBS 6284]
Length = 348
Score = 41.6 bits (96), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 15/121 (12%)
Query: 208 IGPLSPTSI-AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD------CRYYM 260
+ PLSP+++ A ++ S+ N ++ + A ++S+ N+ R C +
Sbjct: 198 VSPLSPSALPALTSENLSNHNITNIKSPAVPKGSTSSNTNISNRNINKQLFKTELCETFT 257
Query: 261 NTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFD 320
GTCKYG C+F H + S+ ++P C+N+ G C +G C+F
Sbjct: 258 TKGTCKYGNKCQFAHGLHELNFKNISS----NFRTKP----CNNWEKLGYCPYGKRCQFK 309
Query: 321 H 321
H
Sbjct: 310 H 310
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + GTCKYG+ C++ H G ++F + R K C + + G C +G
Sbjct: 253 CETFTTKGTCKYGNKCQFAH-----GLHELNFKNISSNFR--TKPCNNWEKLGYCPYGKR 305
Query: 155 CKFHH 159
C+F H
Sbjct: 306 CQFKH 310
>gi|359320685|ref|XP_003639394.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Canis
lupus familiaris]
Length = 491
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 163 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 214
Query: 316 TCRFDH 321
C F H
Sbjct: 215 RCHFIH 220
>gi|348541959|ref|XP_003458454.1| PREDICTED: hypothetical protein LOC100700871 [Oreochromis
niloticus]
Length = 300
Score = 41.6 bits (96), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHP--KERIAQSAASNIGP----LGLPSR--- 296
NL R + P CR + G C +G C F H K+ + +N+G + P R
Sbjct: 130 NLRRRRNVP-CRTFRAFGICPFGTRCNFLHVEGKDEDGRHDLANVGEKTSLVQNPQRHQK 188
Query: 297 -----PGQAICSNYSMYGICKFGPTCRFDH 321
P A+C +S +G C +G C F H
Sbjct: 189 TKGWKPRGALCRTFSAFGFCLYGTRCHFQH 218
>gi|365990802|ref|XP_003672230.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
gi|343771005|emb|CCD26987.1| hypothetical protein NDAI_0J00950 [Naumovozyma dairenensis CBS 421]
Length = 411
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + GTCKYG C+F H + SN ++P C N++ G C +G
Sbjct: 293 CESFTTKGTCKYGNKCQFAHGLHELKLKQRSN----NFRTKP----CVNWAKLGYCPYGK 344
Query: 316 TCRFDH 321
C F H
Sbjct: 345 RCCFKH 350
>gi|302694935|ref|XP_003037146.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
gi|300110843|gb|EFJ02244.1| hypothetical protein SCHCODRAFT_80684 [Schizophyllum commune H4-8]
Length = 735
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+YGA C+F H +E + + + IC + + G C +G
Sbjct: 438 CRSWEEKGTCRYGAKCQFAHGEEELRT--------VQRHPKYKTEICRTFWVSGSCPYGK 489
Query: 316 TCRFDH 321
C F H
Sbjct: 490 RCCFIH 495
>gi|17544438|ref|NP_503019.1| Protein Y116A8C.19 [Caenorhabditis elegans]
gi|5832787|emb|CAB55125.1| Protein Y116A8C.19 [Caenorhabditis elegans]
Length = 196
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCK 111
C F RR C YG C+F H + + Q ++ RN + C + TG CKYG+ C+
Sbjct: 89 CGFQRRGQKCIYGEQCKFAHSVHELRFTQAKK--THRNYKTVLCDKFSTTGYCKYGARCQ 146
Query: 112 YHH 114
+ H
Sbjct: 147 FIH 149
>gi|403374207|gb|EJY87042.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 542
Score = 41.6 bits (96), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 29/66 (43%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CK+ C F H K + + + LPS IC+ + C +G
Sbjct: 360 CRNWEISGKCKFMDSCSFAHGKHEL-------VKKVHLPSNYKTKICTQFHTTAFCPYGN 412
Query: 316 TCRFDH 321
C+F H
Sbjct: 413 RCQFLH 418
>gi|390604805|gb|EIN14196.1| hypothetical protein PUNSTDRAFT_49022 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 286
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 100 GLCKKGDACEFLHEYNLRR-------------MPECWWYAKYGYCSAGDECLYAHPKERK 146
Query: 120 GAGP---VSFNILG--LPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPS 163
P F LG P + + +C Y+ +G C G C HP+P
Sbjct: 147 IECPDYRRGFCKLGPTCPRKHIRRVACQLYL-SGFCPMGPDCPRGHPKPQ 195
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 32/74 (43%), Gaps = 6/74 (8%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQ-----SAASNIGPLGLPSRPGQAICSNYSMY 308
P+C +Y G C G +C + HPKER + +GP P + + + +
Sbjct: 120 PECWWYAKYGYCSAGDECLYAHPKERKIECPDYRRGFCKLGPT-CPRKHIRRVACQLYLS 178
Query: 309 GICKFGPTCRFDHP 322
G C GP C HP
Sbjct: 179 GFCPMGPDCPRGHP 192
>gi|325182946|emb|CCA17401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 772
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 36/83 (43%), Gaps = 21/83 (25%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPA-----------YAAQGAQYREE-LPERNGQP------ 93
+C FYR+ G C +G NCR+ H +A Q EE + R QP
Sbjct: 115 ECAFYRQ-GFCSHGPNCRYRHIKLAREECPETADFALQSKVAEEENVKRRKTQPVNEFYK 173
Query: 94 --DCGYYLKTGTCKYGSTCKYHH 114
C ++ K G+C +G C + H
Sbjct: 174 IAICKHWEKLGSCPFGDECHFAH 196
>gi|223649040|gb|ACN11278.1| Butyrate response factor 1 [Salmo salar]
Length = 400
Score = 41.6 bits (96), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 313
CR Y +GTCKYGA C+F H + GL P C + G C +
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGMDEQR----------GLSRHPKYKTEPCRTFHTIGFCPY 211
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 212 GARCHFIH 219
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGY 97
+A + P R C Y +G C YG+ C+F H +G P+ +P C
Sbjct: 147 LAPSPPISTRYKTEMCRTYEESGTCKYGAKCQFAHGMDEQRGLSRH---PKYKTEP-CRT 202
Query: 98 YLKTGTCKYGSTCKYHHPKDRN 119
+ G C YG+ C + H D
Sbjct: 203 FHTIGFCPYGARCHFIHNADEQ 224
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y ++GTCKYG+ C++ H D L + + C + G C +G
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGMDEQRG-------LSRHPKYKTEPCRTFHTIGFCPYGAR 214
Query: 155 CKFHHPQPSSLG 166
C F H LG
Sbjct: 215 CHFIHNADEQLG 226
>gi|348686519|gb|EGZ26334.1| hypothetical protein PHYSODRAFT_555909 [Phytophthora sojae]
Length = 343
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 1/71 (1%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
+ G C+YGS C Y H + + GL CP+++R G+CK+G C+
Sbjct: 77 FFVLGKCRYGSRCTYSHALPEQVSECAADEAEGLSAAAALVDCPFFLR-GNCKYGEHCRL 135
Query: 158 HHPQPSSLGTA 168
H LG A
Sbjct: 136 RHNPAMLLGAA 146
>gi|320582100|gb|EFW96318.1| mRNA 3'-end-processing protein, putative [Ogataea parapolymorpha
DL-1]
Length = 219
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 46/117 (39%), Gaps = 29/117 (24%)
Query: 48 PGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYG 107
P P C F+ ++G C G++C HP+ N + C Y+L+ G CK G
Sbjct: 38 PDRPICEFWLQSGKCPNGNDCENKHPSKIF------------NNKIVCKYWLR-GLCKMG 84
Query: 108 STCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSS 164
C + H +N+ +P C YY + G C C + H P S
Sbjct: 85 DDCDFLH----------EYNLQRMP------ECAYYSQNGVCTQSPECIYLHVDPQS 125
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 30/73 (41%), Gaps = 17/73 (23%)
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGI 310
PD+P C +++ +G C G DC+ HP + I Y + G+
Sbjct: 38 PDRPICEFWLQSGKCPNGNDCENKHPSKIF-----------------NNKIVCKYWLRGL 80
Query: 311 CKFGPTCRFDHPY 323
CK G C F H Y
Sbjct: 81 CKMGDDCDFLHEY 93
>gi|146218585|gb|AAI39895.1| Zgc:162730 protein [Danio rerio]
Length = 336
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYGA C+F H + + G P QA C + +G C +G
Sbjct: 118 CRSFQEHGSCKYGAKCQFAHGENELR-------GLYRHPKYKTQA-CRTFYQFGYCPYGS 169
Query: 316 TCRFDH 321
C F H
Sbjct: 170 RCHFIH 175
Score = 38.1 bits (87), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 5/99 (5%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPA-RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
++ ++ R+K HD G + P+ R C ++ G C YG+ C+F H
Sbjct: 83 SLNDSFSRMKPHDVPPPPGFPPLATLPSNRYKTELCRSFQEHGSCKYGAKCQFAHGENEL 142
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPK 116
+G YR P+ Q C + + G C YGS C + H +
Sbjct: 143 RGL-YRH--PKYKTQA-CRTFYQFGYCPYGSRCHFIHEE 177
>gi|145504340|ref|XP_001438142.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405303|emb|CAK70745.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 41.6 bits (96), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 72 HPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL 131
H + QY EE ++ C ++ TG CKYG C + H + P + L
Sbjct: 42 HFETIQEKQQYIEEYTKKKKTELCKNFVMTGRCKYGDKCSFAHG--QTELQPKT----HL 95
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
+ K C + + G C +G+ C++ H +
Sbjct: 96 HSKYKTKPCKRFFQQGYCPYGIRCQYIHDE 125
>gi|17544440|ref|NP_503020.1| Protein Y116A8C.20 [Caenorhabditis elegans]
gi|5832788|emb|CAB55126.1| Protein Y116A8C.20 [Caenorhabditis elegans]
Length = 201
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 18 DNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAA 77
D + E + R+K QEG CL ++R C YG C+F H +
Sbjct: 73 DELREEMKRMK---RQEGAFKTAL-----------CLSHKRGKTCIYGEQCKFAHGVHEL 118
Query: 78 QGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCKYHH 114
+ Q ++ RN + C + TG CKYG C++ H
Sbjct: 119 RCQQAKKN--HRNYKTVLCDKFTTTGYCKYGIRCQFIH 154
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 45/115 (39%), Gaps = 15/115 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHH-PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFG 314
C + TC YG CKF H E Q A N +C ++ G CK+G
Sbjct: 94 CLSHKRGKTCIYGEQCKFAHGVHELRCQQAKKN------HRNYKTVLCDKFTTTGYCKYG 147
Query: 315 PTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNW 369
C+F H ++ P+ D L +S ++ D+SS +PNW
Sbjct: 148 IRCQFIHR----SMDATNVTRPIDTADFKLDVQSDLSRAFAL----DSSSFLPNW 194
>gi|391330077|ref|XP_003739491.1| PREDICTED: uncharacterized protein LOC100902394 [Metaseiulus
occidentalis]
Length = 354
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 39/100 (39%), Gaps = 8/100 (8%)
Query: 222 IYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIA 281
+ + RN A ++ + N R CR + G CKYGA C+F H
Sbjct: 64 LQNRRNNMSDNADDNLNTTADGVSNRSSRYKTELCRPFEENGMCKYGARCQFAH------ 117
Query: 282 QSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
A+ + L + +C + G+C +G C F H
Sbjct: 118 --GAAELRTLARHPKYKSQLCRTFHSNGLCPYGHRCHFIH 155
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 49/118 (41%), Gaps = 26/118 (22%)
Query: 4 NRQVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCG 63
N Q + N +++ + DN+ N GV+ S +R C + G+C
Sbjct: 63 NLQNRRNNMSDNADDNL-----------NTTADGVSNRS---SRYKTELCRPFEENGMCK 108
Query: 64 YGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
YG+ C+F H A A+ +Y+ +L C + G C YG C + H +D
Sbjct: 109 YGARCQFAHGAAELRTLARHPKYKSQL--------CRTFHSNGLCPYGHRCHFIHNQD 158
>gi|334346699|ref|XP_001380936.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Monodelphis
domestica]
Length = 466
Score = 41.6 bits (96), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
+D+ +CP+Y++TGSC+FG C H P+S T L + + G
Sbjct: 166 KDQANCPFYIKTGSCRFGDRCSRKHNYPTSSQTLLIRSMFITFG 209
>gi|50755569|ref|XP_414800.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Gallus gallus]
Length = 243
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 58/159 (36%), Gaps = 16/159 (10%)
Query: 179 SMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQ 236
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 22 QLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQ 81
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIG 289
L P+C +Y G C +C F H P+ +I G
Sbjct: 82 CEFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
PL + IC NY + G C GPTC+F HP P+
Sbjct: 136 PLCRHRHTRRVICVNY-LVGFCPEGPTCKFMHPRFELPM 173
>gi|380026391|ref|XP_003696935.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Apis florea]
Length = 416
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 50/117 (42%), Gaps = 8/117 (6%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N G C+ G +C++ H + I PS +C + + GICKFG
Sbjct: 11 CRYFKN-GMCREGNNCRYRHTQGIWNDGNNETIISSSAPSM--NTVCRFFKL-GICKFGN 66
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQA-ISATHSIETSPDASSKIPNWVQ 371
C F H N + SI SS H + IS +I+ D +S WV+
Sbjct: 67 QCYFRHSTETVDNNL---VNANSIESSSPGQHTSNISTPTTIKNVKDNTSIAEEWVK 120
>gi|313235948|emb|CBY25091.1| unnamed protein product [Oikopleura dioica]
Length = 288
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 23/113 (20%)
Query: 78 QGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDE 137
Q + Y+ EL C + TG C+YG C++ H + N++ P + E
Sbjct: 43 QTSLYKTEL--------CRSWDDTGFCRYGKKCQFAHSQKELR------NLMRHPKYKTE 88
Query: 138 KSCPYYMRTGSCKFGVACKFHH-------PQPSS-LGTALPLTGNASLGSMGS 182
C + G C +G C F H P PS A+PL +LGS+ S
Sbjct: 89 M-CDSFHTVGVCPYGNRCHFVHNDIEALRPSPSEPAAKAVPLRKTVTLGSLQS 140
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +TG C+YG C+F H ++ + L + +C ++ G+C +G
Sbjct: 52 CRSWDDTGFCRYGKKCQFAHSQKELRN--------LMRHPKYKTEMCDSFHTVGVCPYGN 103
Query: 316 TCRFDH 321
C F H
Sbjct: 104 RCHFVH 109
>gi|115313847|gb|AAI24447.1| Zgc:162730 protein [Danio rerio]
Length = 335
Score = 41.6 bits (96), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYGA C+F H + + G P QA C + +G C +G
Sbjct: 117 CRSFQEHGSCKYGAKCQFAHGENELR-------GLYRHPKYKTQA-CRTFYQFGYCPYGS 168
Query: 316 TCRFDH 321
C F H
Sbjct: 169 RCHFIH 174
>gi|339256988|ref|XP_003370127.1| conserved hypothetical protein [Trichinella spiralis]
gi|316964971|gb|EFV49843.1| conserved hypothetical protein [Trichinella spiralis]
Length = 181
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY++N C++G++C F H + S N P C N +G CK+GP
Sbjct: 35 CRYFVNGPGCRFGSNCFFAHNLVELRPSMYRNFLYKTEP-------CRNLRTWGHCKYGP 87
Query: 316 TCRFDH 321
C + H
Sbjct: 88 RCLYLH 93
>gi|307169532|gb|EFN62174.1| Protein TIS11 [Camponotus floridanus]
Length = 361
Score = 41.6 bits (96), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G+CKYG C+F H + L + +C + G C +GP
Sbjct: 39 CRPYEESGSCKYGDKCQFAH--------GYGELRNLARHPKYKTELCRTFHTIGFCPYGP 90
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 91 RCHFIHNF 98
>gi|300794488|ref|NP_001178120.1| zinc finger protein 36, C3H1 type-like 2 [Bos taurus]
Length = 485
Score = 41.6 bits (96), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 316 TCRFDH 321
C F H
Sbjct: 207 RCHFIH 212
>gi|410897635|ref|XP_003962304.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Takifugu
rubripes]
Length = 370
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 42/114 (36%), Gaps = 34/114 (29%)
Query: 208 IGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKY 267
+GP SPT GS + SSR + +L CR + G+CKY
Sbjct: 127 LGPASPT--GGSGQVNSSRYKTEL------------------------CRPFEENGSCKY 160
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G C+F H + L + +C + G C +GP C F H
Sbjct: 161 GDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGPRCHFIH 206
>gi|308509954|ref|XP_003117160.1| CRE-MOE-3 protein [Caenorhabditis remanei]
gi|308242074|gb|EFO86026.1| CRE-MOE-3 protein [Caenorhabditis remanei]
Length = 383
Score = 41.6 bits (96), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ + TC + +C+F H ++ + S I P ++ +C Y+ G+C +G
Sbjct: 144 CQAWLESKTCTFAENCRFAHGEDELR---PSKIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 199
Query: 316 TCRFDHPYAG 325
C F HP G
Sbjct: 200 RCLFIHPDHG 209
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 52/131 (39%), Gaps = 19/131 (14%)
Query: 4 NRQVKSNAVANQSADNIE-EAIWRLKIH--DN-QEGGGVAQASP--YPARP--GE----- 50
N Q++ N+ I+ A+ RL + DN Q GG SP +P R GE
Sbjct: 76 NEQLRKEIAENKQIQTIQMRAMGRLPTNPADNIQAFGGSPLVSPHGFPQRAPRGERRMQK 135
Query: 51 PD------CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTC 104
P+ C + + C + NCRF H + ++ + C Y TG C
Sbjct: 136 PESYKTVICQAWLESKTCTFAENCRFAHGEDELRPSKIEPRQNNKYKTKLCDKYTTTGLC 195
Query: 105 KYGSTCKYHHP 115
YG C + HP
Sbjct: 196 PYGKRCLFIHP 206
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
P A +G + R + PE C +L++ TC + C++ H +D + P
Sbjct: 123 PQRAPRG-ERRMQKPESYKTVICQAWLESKTCTFAENCRFAHGEDELRPSKIE------P 175
Query: 133 MRQDE---KSCPYYMRTGSCKFGVACKFHHP 160
+ ++ K C Y TG C +G C F HP
Sbjct: 176 RQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP 206
>gi|47204423|emb|CAG14799.1| unnamed protein product [Tetraodon nigroviridis]
Length = 477
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 313
CR Y +GTCKYG C+F H + + G+ P +C + G C +
Sbjct: 153 CRTYEESGTCKYGTKCQFAHGVDELR----------GISRHPKYKTELCRTFHTIGFCPY 202
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 203 GARCHFIH 210
Score = 37.7 bits (86), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 12/69 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y +G C YG+ C+F H +G +Y+ EL C + G C YG+
Sbjct: 153 CRTYEESGTCKYGTKCQFAHGVDELRGISRHPKYKTEL--------CRTFHTIGFCPYGA 204
Query: 109 TCKYHHPKD 117
C + H D
Sbjct: 205 RCHFIHNAD 213
>gi|417401900|gb|JAA47814.1| Putative zinc finger protein 36 c3h1 type-like 2 [Desmodus
rotundus]
Length = 496
Score = 41.6 bits (96), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 162 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 213
Query: 316 TCRFDH 321
C F H
Sbjct: 214 RCHFIH 219
>gi|449550650|gb|EMD41614.1| hypothetical protein CERSUDRAFT_128533 [Ceriporiopsis subvermispora
B]
Length = 780
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 11/75 (14%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+C+YGA C+F H +E + + + + IC + + G C +G
Sbjct: 470 CRSWEEKGSCRYGAKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 521
Query: 316 TCRFDH---PYAGYP 327
C F H P +G P
Sbjct: 522 RCCFIHTELPASGAP 536
>gi|389742287|gb|EIM83474.1| hypothetical protein STEHIDRAFT_160055 [Stereum hirsutum FP-91666
SS1]
Length = 803
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+YG C+F H +E I + + + IC + + G C +G
Sbjct: 487 CRSWEEKGTCRYGPKCQFAHGEEEIRK--------VSRHPKYKTEICRTFWVSGSCPYGK 538
Query: 316 TCRFDH 321
C F H
Sbjct: 539 RCCFIH 544
>gi|156084372|ref|XP_001609669.1| hypothetical protein [Babesia bovis T2Bo]
gi|154796921|gb|EDO06101.1| hypothetical protein BBOV_II001430 [Babesia bovis]
Length = 227
Score = 41.6 bits (96), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 50/129 (38%), Gaps = 31/129 (24%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLK 100
S P P C +Y RTG C +GS+CRF+H + + C Y+L
Sbjct: 46 VSDTPITDHRPLCKYYYRTGSCLHGSDCRFSHNCLPLTSKELKL----------CRYFLM 95
Query: 101 TGT-CKY-GSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFH 158
T CKY + CKY H GL + C + G C + CKF
Sbjct: 96 GPTNCKYTAAECKYSHEP-------------GLFL------CRNNIVNGECNNLLRCKFK 136
Query: 159 HPQPSSLGT 167
H +S+ +
Sbjct: 137 HIDSASITS 145
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 44/109 (40%), Gaps = 14/109 (12%)
Query: 227 NQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH-----PKERIA 281
N ++ ++ S + + P +P C+YY TG+C +G+DC+F H + +
Sbjct: 29 NDWEIPENKDLNCPSRTVSDTPITDHRPLCKYYYRTGSCLHGSDCRFSHNCLPLTSKELK 88
Query: 282 QSAASNIGPLGLP---------SRPGQAICSNYSMYGICKFGPTCRFDH 321
+GP PG +C N + G C C+F H
Sbjct: 89 LCRYFLMGPTNCKYTAAECKYSHEPGLFLCRNNIVNGECNNLLRCKFKH 137
>gi|351726504|ref|NP_001236361.1| uncharacterized protein LOC100527203 [Glycine max]
gi|255631776|gb|ACU16255.1| unknown [Glycine max]
Length = 127
Score = 41.2 bits (95), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 241 SASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
S Q +P P++P C +++NTG C+YG CK+ HP
Sbjct: 41 SFKQQQIPPIPNRPLCFHFVNTGFCRYGDSCKYLHP 76
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 14/39 (35%), Positives = 24/39 (61%)
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
++++P +P C +++ TG C+YG +CKY HP N
Sbjct: 44 QQQIPPIPNRPLCFHFVNTGFCRYGDSCKYLHPVPNNNV 82
>gi|149050529|gb|EDM02702.1| zinc finger protein 36, C3H type-like 2 [Rattus norvegicus]
Length = 400
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 316 TCRFDH 321
C F H
Sbjct: 209 RCHFIH 214
>gi|296223994|ref|XP_002757880.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like
[Callithrix jacchus]
Length = 857
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 521 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 572
Query: 316 TCRFDH 321
C F H
Sbjct: 573 RCHFIH 578
>gi|167535049|ref|XP_001749199.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772352|gb|EDQ86005.1| predicted protein [Monosiga brevicollis MX1]
Length = 468
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 20/25 (80%)
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPK 277
+P C++++ TGTC+YG DC F HP+
Sbjct: 89 KPQCKHWLRTGTCRYGTDCFFLHPE 113
Score = 38.5 bits (88), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 20/25 (80%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPK 116
+P C ++L+TGTC+YG+ C + HP+
Sbjct: 89 KPQCKHWLRTGTCRYGTDCFFLHPE 113
>gi|2353340|gb|AAB69448.1| Tis11 family protein [Crassostrea virginica]
Length = 401
Score = 41.2 bits (95), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H A + L + +C + G C +GP
Sbjct: 121 CRPFEESGHCKYGDKCQFAH--------GAHELRNLNRHPKYKTELCRTFHTIGFCPYGP 172
Query: 316 TCRFDH 321
C F H
Sbjct: 173 RCHFIH 178
>gi|302687148|ref|XP_003033254.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
gi|300106948|gb|EFI98351.1| hypothetical protein SCHCODRAFT_256806 [Schizophyllum commune H4-8]
Length = 1239
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 22/91 (24%)
Query: 251 PDQPDCRYYMNTGTCKYGADCKFHHPKERI-------------------AQSAASNIGPL 291
P Q CR+++ GTC +G +C++ H E S+ S+ P
Sbjct: 197 PGQDVCRFWLK-GTCMHGKNCRYKHSNESRNVFDKSPAPRGNSTSRASPRGSSTSSPAPW 255
Query: 292 GL-PSRPGQAICSNYSMYGICKFGPTCRFDH 321
G S PG+ +C + + G CK+G +CR++H
Sbjct: 256 GSSASAPGRDVC-RFWLKGDCKYGNSCRYEH 285
>gi|67472471|ref|XP_652039.1| hypothetical protein [Entamoeba histolytica HM-1:IMSS]
gi|56468845|gb|EAL46653.1| hypothetical protein EHI_055700 [Entamoeba histolytica HM-1:IMSS]
gi|449703561|gb|EMD43992.1| zinc finger Cx8-C-x5-C-x3-H type (and similar) domain containing
protein [Entamoeba histolytica KU27]
Length = 222
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 7/73 (9%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHP-------AYAAQGAQYREELPERNGQPDCGYYLKT 101
G C+F+ + G C G +C F+H ++ Q ++ + + C Y+ +T
Sbjct: 137 GTKPCIFFMQNGYCKKGGSCTFSHDVSSLNNHSFCQQNSKQFVSVDKLYRTKPCKYFFET 196
Query: 102 GTCKYGSTCKYHH 114
G C+ G C + H
Sbjct: 197 GVCRKGEHCNFSH 209
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 14/87 (16%)
Query: 85 ELPE------RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSF------NILGLP 132
ELP+ + G C ++++ G CK G +C + H D + SF + +
Sbjct: 125 ELPDSPQKHLKYGTKPCIFFMQNGYCKKGGSCTFSH--DVSSLNNHSFCQQNSKQFVSVD 182
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHH 159
K C Y+ TG C+ G C F H
Sbjct: 183 KLYRTKPCKYFFETGVCRKGEHCNFSH 209
>gi|68477649|ref|XP_717137.1| hypothetical protein CaO19.5334 [Candida albicans SC5314]
gi|68477812|ref|XP_717058.1| hypothetical protein CaO19.12794 [Candida albicans SC5314]
gi|46438755|gb|EAK98081.1| hypothetical protein CaO19.12794 [Candida albicans SC5314]
gi|46438837|gb|EAK98162.1| hypothetical protein CaO19.5334 [Candida albicans SC5314]
Length = 203
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C +M TG C Y C+F H + + P S+P C+N++ YG C++G
Sbjct: 144 CASFMKTGVCPYANKCQFAHGENELKHVER----PPKWRSKP----CANWTKYGSCRYGN 195
Query: 316 TCRFDH 321
C F H
Sbjct: 196 RCCFKH 201
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + +TG+C Y + C+F A+ ++ E P+ +P C + K G+C+YG+ C +
Sbjct: 144 CASFMKTGVCPYANKCQF---AHGENELKHVERPPKWRSKP-CANWTKYGSCRYGNRCCF 199
Query: 113 HH 114
H
Sbjct: 200 KH 201
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++KTG C Y + C++ H G + P + K C + + GSC++G
Sbjct: 144 CASFMKTGVCPYANKCQFAH-------GENELKHVERPPKWRSKPCANWTKYGSCRYGNR 196
Query: 155 CKFHH 159
C F H
Sbjct: 197 CCFKH 201
>gi|74144555|dbj|BAE36112.1| unnamed protein product [Mus musculus]
Length = 568
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 245 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 296
Query: 316 TCRFDH 321
C F H
Sbjct: 297 RCHFIH 302
>gi|405960411|gb|EKC26337.1| Butyrate response factor 1 [Crassostrea gigas]
Length = 396
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H A + L + +C + G C +GP
Sbjct: 119 CRPFEESGHCKYGDKCQFAH--------GAHELRNLNRHPKYKTELCRTFHTIGFCPYGP 170
Query: 316 TCRFDH 321
C F H
Sbjct: 171 RCHFIH 176
>gi|311252736|ref|XP_003125238.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Sus
scrofa]
Length = 493
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|417411287|gb|JAA52088.1| Putative zinc finger protein 36 c3h1 type-like 2, partial [Desmodus
rotundus]
Length = 507
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 145 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 196
Query: 316 TCRFDH 321
C F H
Sbjct: 197 RCHFIH 202
>gi|327272280|ref|XP_003220913.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Anolis
carolinensis]
Length = 486
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 66/196 (33%), Gaps = 34/196 (17%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y++ G CK G C+Y H L Q C Y+ R G C +
Sbjct: 63 QVACRYFMH-GVCKEGDNCRYSH---------------DLYTSQSAMVCRYFQR-GCCAY 105
Query: 152 GVACKFHHPQP---SSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNI 208
G C++ H +P + T P T + S + V PS G A + +
Sbjct: 106 GDRCRYEHTKPLKREEVTTVSPST--KTFPSASTDVTPSPGTLEANTGETEVEDRSLAAA 163
Query: 209 GPLSPTSIAGSNLI----YSSR-----NQGDLGAGAQMHILSASSQNLPERPDQPDCRYY 259
GP++ + + Y R + L NL + Y
Sbjct: 164 GPVAEDWVNAVEFVPGQPYCGRAAPSCTEAPLQGMVIEEEYEKQQTNLEMKKQLCP---Y 220
Query: 260 MNTGTCKYGADCKFHH 275
G C+YG +C + H
Sbjct: 221 AAVGECRYGENCVYIH 236
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 13/61 (21%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G NCR++H Y +Q A C Y+ + G C YG C+Y H
Sbjct: 68 YFMHGVCKEGDNCRYSHDLYTSQSAMV------------CRYFQR-GCCAYGDRCRYEHT 114
Query: 116 K 116
K
Sbjct: 115 K 115
>gi|308490987|ref|XP_003107685.1| hypothetical protein CRE_13265 [Caenorhabditis remanei]
gi|308250554|gb|EFO94506.1| hypothetical protein CRE_13265 [Caenorhabditis remanei]
Length = 387
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ + TC + +C+F H +E + S I P ++ +C Y+ G+C +G
Sbjct: 110 CQAWLESKTCTFAENCRFAHGEEELR---PSFIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 165
Query: 316 TCRFDHPYAG 325
C F HP G
Sbjct: 166 RCLFIHPDNG 175
>gi|356551213|ref|XP_003543972.1| PREDICTED: uncharacterized protein LOC100788859 [Glycine max]
Length = 2033
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 50/135 (37%), Gaps = 26/135 (19%)
Query: 32 NQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNG 91
N++GG PY P + GLC NC+ H +PER
Sbjct: 1795 NKDGGKC----PYIHDPSKIAVCTKFLNGLCST-PNCKLTHKV-----------IPER-- 1836
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDE------KSCPYYMR 145
PDC Y+L+ G C C Y H A + G +E CP +
Sbjct: 1837 MPDCSYFLQ-GLCS-NRNCPYRHVNVNPKASICEGFLKGYCADGNECRKKHSYVCPTFEA 1894
Query: 146 TGSCKFGVACKFHHP 160
TG+C G CK HHP
Sbjct: 1895 TGTCTQGTGCKLHHP 1909
>gi|255558556|ref|XP_002520303.1| protein with unknown function [Ricinus communis]
gi|223540522|gb|EEF42089.1| protein with unknown function [Ricinus communis]
Length = 2030
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 42/108 (38%), Gaps = 22/108 (20%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC + C+ H +PER PDC Y+L+ G C C Y H
Sbjct: 1835 GLC-FNPVCKLTHKV-----------IPER--MPDCSYFLQ-GLCS-NENCPYRHVHVNP 1878
Query: 120 GAGPVSFNILGLP------MRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
A + G ++ CP Y TGSC G CK HHP+
Sbjct: 1879 NASTCEGFLRGYCNDGNECQKKHSYVCPTYEATGSCPEGSKCKLHHPK 1926
>gi|345497755|ref|XP_001599033.2| PREDICTED: hypothetical protein LOC100113609 [Nasonia vitripennis]
Length = 386
Score = 41.2 bits (95), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 30/68 (44%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G+CKYG C+F H + + L + +C + G C +GP
Sbjct: 84 CRPFEESGSCKYGDKCQFAH--------GYNELRNLARHPKYKTELCRTFHKIGFCPYGP 135
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 136 RCHFVHNF 143
>gi|145487820|ref|XP_001429915.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124397009|emb|CAK62517.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 6/90 (6%)
Query: 72 HPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL 131
H + QY EE ++ C +++TG CKYG C + H P + L
Sbjct: 48 HFITIQEKKQYIEEYTKKKKTELCKNFVQTGRCKYGYECSFAHGDSE--LQPKT----HL 101
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
+ K C + + G C +G+ C++ H +
Sbjct: 102 HSKYKTKPCKRFFQQGYCPYGIRCQYIHDE 131
>gi|402890699|ref|XP_003908616.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Papio anubis]
gi|384949034|gb|AFI38122.1| zinc finger protein 36, C3H1 type-like 2 [Macaca mulatta]
gi|387542100|gb|AFJ71677.1| zinc finger protein 36, C3H1 type-like 2 [Macaca mulatta]
Length = 492
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|348523051|ref|XP_003449037.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 422
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 313
CR Y +G CKYGA C+F H + + GL P C + G C +
Sbjct: 174 CRTYEESGACKYGAKCQFAHGMDELR----------GLNRHPKYKTEPCRTFHTIGFCPY 223
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 224 GARCHFIH 231
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 31/70 (44%), Gaps = 4/70 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y +G C YG+ C+F H +G P+ +P C + G C YG+ C +
Sbjct: 174 CRTYEESGACKYGAKCQFAHGMDELRGLNRH---PKYKTEP-CRTFHTIGFCPYGARCHF 229
Query: 113 HHPKDRNGAG 122
H D AG
Sbjct: 230 IHNADELNAG 239
>gi|224013888|ref|XP_002296608.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968960|gb|EED87304.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 471
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 7/114 (6%)
Query: 55 FYRRTGLCGYGSNCRFNHPAY---AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK 111
F + C YG +C+F H AA ++ +N C + K G CK G C
Sbjct: 197 FLWKNFRCPYGDDCKFAHEGEGGCAANKVSDGKDGESKNAVQKCFSFKKKGKCKLGDKCP 256
Query: 112 YHH---PKDRNGAGPVSFNILGLPMR-QDEKSCPYYMRTGSCKFGVACKFHHPQ 161
+ H K + + + G R + +K C + G C+ G C F H +
Sbjct: 257 FSHDVIKKSDDAEKKEATDAKGNNKRDKAQKDCINWKNKGKCRKGDKCPFRHDE 310
>gi|255083106|ref|XP_002504539.1| superfamily I helicase [Micromonas sp. RCC299]
gi|226519807|gb|ACO65797.1| superfamily I helicase [Micromonas sp. RCC299]
Length = 1155
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 37/81 (45%), Gaps = 22/81 (27%)
Query: 248 PERPDQPD----CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 303
PE P QPD CR ++ G C YG+DC+F H K A+S + +C
Sbjct: 1054 PENP-QPDNQRVCREWL-AGKCLYGSDCRFAHEKRYDAKS---------------KKLCR 1096
Query: 304 NYSMYGICKFGPTCRFDHPYA 324
++ M G C G C F H A
Sbjct: 1097 DF-MMGKCHRGAECVFSHDTA 1116
>gi|205688456|sp|Q6YVX9.2|C3H16_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 16;
Short=OsC3H16
Length = 678
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 25/38 (65%)
Query: 132 PMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
P++QD+ CP++++TG+C+FGV C H P T L
Sbjct: 161 PIQQDKAHCPFHLKTGACRFGVRCSRVHFYPDKSCTLL 198
>gi|268531842|ref|XP_002631049.1| C. briggsae CBR-MOE-3 protein [Caenorhabditis briggsae]
Length = 357
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ ++ + TC + +C+F H ++ + S I P ++ +C Y+ G+C +G
Sbjct: 120 CQAWLESKTCNFAENCRFAHGEDELR---PSKIEPRQ-NNKYKTKLCDKYTTTGLCPYGK 175
Query: 316 TCRFDHPYAG 325
C F HP G
Sbjct: 176 RCLFIHPDHG 185
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 40/91 (43%), Gaps = 10/91 (10%)
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP 132
P A +G + R + PE C +L++ TC + C++ H +D + P
Sbjct: 99 PQRAPRG-ERRMQKPESYKTVICQAWLESKTCNFAENCRFAHGEDELRPSKIE------P 151
Query: 133 MRQDE---KSCPYYMRTGSCKFGVACKFHHP 160
+ ++ K C Y TG C +G C F HP
Sbjct: 152 RQNNKYKTKLCDKYTTTGLCPYGKRCLFIHP 182
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 25/63 (39%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + + C + NCRF H + ++ + C Y TG C YG C +
Sbjct: 120 CQAWLESKTCNFAENCRFAHGEDELRPSKIEPRQNNKYKTKLCDKYTTTGLCPYGKRCLF 179
Query: 113 HHP 115
HP
Sbjct: 180 IHP 182
>gi|322799634|gb|EFZ20906.1| hypothetical protein SINV_11495 [Solenopsis invicta]
Length = 388
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 28/68 (41%), Gaps = 8/68 (11%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y G+CKYG C+F H + L + +C + G C +GP
Sbjct: 72 CRPYEENGSCKYGDKCQFAH--------GYGELRNLARHPKYKTELCRTFHTIGFCPYGP 123
Query: 316 TCRFDHPY 323
C F H +
Sbjct: 124 RCHFIHNF 131
>gi|296482648|tpg|DAA24763.1| TPA: zinc finger protein 36, C3H type-like 2 [Bos taurus]
Length = 486
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 316 TCRFDH 321
C F H
Sbjct: 207 RCHFIH 212
>gi|19113245|ref|NP_596453.1| zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|1731429|sp|P47979.1|ZFS1_SCHPO RecName: Full=Zinc finger protein zfs1; AltName: Full=Multicopy
suppressor of overexpressed cyr1 protein 4
gi|755103|dbj|BAA08654.1| zinc-finger protein [Schizosaccharomyces pombe]
gi|7106064|emb|CAB75997.1| CCCH tandem zinc finger protein, human Tristetraprolin homolog
Zfs1, involved in mRNA catabolism [Schizosaccharomyces
pombe]
Length = 404
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + +GTC+YG+ C+F H + + + P P + C ++ MYG C +G
Sbjct: 332 CKNWQISGTCRYGSKCQFAHGNQELKE-------PPRHPKYKSER-CRSFMMYGYCPYGL 383
Query: 316 TCRFDH 321
C F H
Sbjct: 384 RCCFLH 389
>gi|49249965|ref|NP_001001806.1| zinc finger protein 36, C3H1 type-like 2 [Mus musculus]
gi|223460781|gb|AAI39417.1| Zinc finger protein 36, C3H type-like 2 [Mus musculus]
Length = 484
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 316 TCRFDH 321
C F H
Sbjct: 213 RCHFIH 218
>gi|74218063|dbj|BAE42014.1| unnamed protein product [Mus musculus]
Length = 484
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 316 TCRFDH 321
C F H
Sbjct: 213 RCHFIH 218
>gi|410351521|gb|JAA42364.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
gi|410351523|gb|JAA42365.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
Length = 491
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|330797093|ref|XP_003286597.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
gi|325083422|gb|EGC36875.1| hypothetical protein DICPUDRAFT_31125 [Dictyostelium purpureum]
Length = 561
Score = 41.2 bits (95), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 13/68 (19%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + + C+YG CKF H E ++ ++G C +Y YG CKFG
Sbjct: 2 CDKMVQSEKCEYGDKCKFSHNVEEYLKTKPKSLGK-----------CLSYEAYGKCKFGI 50
Query: 316 TCRF--DH 321
C F DH
Sbjct: 51 NCYFGEDH 58
>gi|169603423|ref|XP_001795133.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
gi|111067361|gb|EAT88481.1| hypothetical protein SNOG_04721 [Phaeosphaeria nodorum SN15]
Length = 232
Score = 41.2 bits (95), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 49/123 (39%), Gaps = 27/123 (21%)
Query: 48 PGEPDCLF----YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGT 103
P P C F + GLC G C F H + P+C YY +T T
Sbjct: 43 PNRPACKFLVCKHWLRGLCKKGETCEFLHEYNLRR-------------MPECSYYARTQT 89
Query: 104 CKYGSTCKYHH--PKDRNGAGP---VSFNILG----LPMRQDEKSCPYYMRTGSCKFGVA 154
C G C Y H P+ + + P F LG L + EK CP+Y+ G C G
Sbjct: 90 CSNGDDCLYLHIDPEAKRPSCPHYDRGFCPLGPYCALKHNKKEKLCPFYL-CGFCPEGKG 148
Query: 155 CKF 157
CK+
Sbjct: 149 CKY 151
>gi|17539068|ref|NP_502949.1| Protein C35D6.4 [Caenorhabditis elegans]
gi|3874806|emb|CAB05147.1| Protein C35D6.4 [Caenorhabditis elegans]
Length = 203
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCK 111
C F+RR C YG C+F H + + Q + RN + C + TG CKYG C+
Sbjct: 94 CGFHRRGQKCAYGEKCKFAHSVHELRFPQTKRN--HRNYKTVLCNNFSTTGHCKYGIRCQ 151
Query: 112 YHH 114
+ H
Sbjct: 152 FIH 154
>gi|114577167|ref|XP_515435.2| PREDICTED: zinc finger protein 36, C3H type-like 2 [Pan
troglodytes]
gi|410267656|gb|JAA21794.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
gi|410267658|gb|JAA21795.1| zinc finger protein 36, C3H type-like 2 [Pan troglodytes]
Length = 491
Score = 41.2 bits (95), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|432937814|ref|XP_004082483.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like, partial
[Oryzias latipes]
Length = 411
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 209 CRPFEENGSCKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 260
Query: 316 TCRFDH 321
C F H
Sbjct: 261 RCHFIH 266
>gi|395829566|ref|XP_003787923.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Otolemur
garnettii]
Length = 495
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 161 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 212
Query: 316 TCRFDH 321
C F H
Sbjct: 213 RCHFIH 218
>gi|396472497|ref|XP_003839131.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
gi|312215700|emb|CBX95652.1| hypothetical protein LEMA_P028040.1 [Leptosphaeria maculans JN3]
Length = 254
Score = 41.2 bits (95), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 44/107 (41%), Gaps = 23/107 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH--PKD 117
GLC G C F H + P+C YY +T TC G C Y H P+
Sbjct: 83 GLCKKGDTCEFLHEYNLRR-------------MPECSYYARTQTCSNGDDCLYLHIDPEA 129
Query: 118 RNGAGP---VSFNILG----LPMRQDEKSCPYYMRTGSCKFGVACKF 157
+ A P F LG L + +K CPYY+ G C G CK+
Sbjct: 130 KRPACPHYDRGFCPLGPHCALKHNKKDKLCPYYL-CGFCPEGKGCKY 175
>gi|60652785|gb|AAX29087.1| zinc finger protein 36 C3H type-like 2 [synthetic construct]
Length = 498
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|15812178|ref|NP_008818.3| zinc finger protein 36, C3H1 type-like 2 [Homo sapiens]
gi|146291085|sp|P47974.3|TISD_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 2;
Short=ZFP36-like 2; AltName: Full=Butyrate response
factor 2; AltName: Full=EGF-response factor 2;
Short=ERF-2; AltName: Full=Protein TIS11D
gi|62822444|gb|AAY14992.1| unknown [Homo sapiens]
gi|119620711|gb|EAX00306.1| zinc finger protein 36, C3H type-like 2, isoform CRA_b [Homo
sapiens]
Length = 494
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|13477111|gb|AAH05010.1| ZFP36L2 protein [Homo sapiens]
gi|123993447|gb|ABM84325.1| zinc finger protein 36, C3H type-like 2 [synthetic construct]
gi|124000545|gb|ABM87781.1| zinc finger protein 36, C3H type-like 2 [synthetic construct]
Length = 497
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|397475530|ref|XP_003809188.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2, partial [Pan paniscus]
Length = 475
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 289 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 340
Query: 316 TCRFDH 321
C F H
Sbjct: 341 RCHFIH 346
>gi|294948266|ref|XP_002785677.1| hypothetical protein Pmar_PMAR025425 [Perkinsus marinus ATCC 50983]
gi|239899700|gb|EER17473.1| hypothetical protein Pmar_PMAR025425 [Perkinsus marinus ATCC 50983]
Length = 228
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 56/138 (40%), Gaps = 28/138 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+ R G+C G++C F H + C YYL G C+ G +C++
Sbjct: 84 CHFFAR-GMCRNGTSCPFRHDPKSII----------------CTYYLH-GNCRNGISCRF 125
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ-PSSLGTA--- 168
H V + G P C ++ GSC+ G +C++ H + PS L A
Sbjct: 126 SHELPDTQQPAVEEGVDGPP----PDVCKFFWH-GSCRAGSSCRWRHVKAPSRLSAAPPP 180
Query: 169 -LPLTGNASLGSMGSSVL 185
LP N + ++L
Sbjct: 181 NLPAKSNPLVSERAKALL 198
>gi|145344880|ref|XP_001416952.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577178|gb|ABO95245.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 72
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G+C+YGA C+F H ++ + P+ + +C ++ G C +G
Sbjct: 15 CRSWEESGSCRYGAKCQFAHGRD--------ELRPVLRHPKYKTEVCRTFAAQGNCPYGS 66
Query: 316 TCRFDH 321
CRF H
Sbjct: 67 RCRFIH 72
>gi|392349170|ref|XP_003750309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Rattus
norvegicus]
Length = 482
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 316 TCRFDH 321
C F H
Sbjct: 209 RCHFIH 214
>gi|402594222|gb|EJW88148.1| hypothetical protein WUBG_00943 [Wuchereria bancrofti]
Length = 394
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + +TG C YG C+F H + + AA P + +C+ +++YG+C +G
Sbjct: 166 CNAFRDTGQCAYGFHCRFAHGIDEL--RAAPGPHP-----KYKTRLCNKFTLYGLCPYGS 218
Query: 316 TCRFDH 321
C+F H
Sbjct: 219 HCQFIH 224
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA-----QYREELPERNGQPDCGYYLKTGTCKYG 107
C +R TG C YG +CRF H + A +Y+ L C + G C YG
Sbjct: 166 CNAFRDTGQCAYGFHCRFAHGIDELRAAPGPHPKYKTRL--------CNKFTLYGLCPYG 217
Query: 108 STCKYHH 114
S C++ H
Sbjct: 218 SHCQFIH 224
>gi|414881499|tpg|DAA58630.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414881500|tpg|DAA58631.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 691
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 34/121 (28%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
+P +P C FY G C G+NC+F+H + P +P C ++ G+C
Sbjct: 431 KPKKP-CHFYDH-GKCRQGNNCKFSH-----------DFTPSTKSKP-CTHF-ACGSCLK 475
Query: 107 GSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG 166
G C Y H + C Y G+C G CKF H P++ G
Sbjct: 476 GEECPYDHELSK-------------------YECHNYKNNGTCARGDNCKFSHVMPTTEG 516
Query: 167 T 167
T
Sbjct: 517 T 517
>gi|79750234|ref|NP_001031703.1| butyrate response factor 2 [Rattus norvegicus]
Length = 482
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 157 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 208
Query: 316 TCRFDH 321
C F H
Sbjct: 209 RCHFIH 214
>gi|395526014|ref|XP_003765170.1| PREDICTED: tristetraprolin [Sarcophilus harrisii]
Length = 291
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 13/75 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YGS C+F H A++ +Y+ EL C +L G C YG+
Sbjct: 51 CRTFSESGKCRYGSKCQFTHGLEELRPASRHPKYKTEL--------CRKFLLLGACPYGT 102
Query: 109 TCKY-HHPKDRNGAG 122
C + H P D AG
Sbjct: 103 RCHFIHTPYDVLSAG 117
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 11/83 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YG+ C+F H E + P + +C + + G C +G
Sbjct: 51 CRTFSESGKCRYGSKCQFTHGLE--------ELRPASRHPKYKTELCRKFLLLGACPYGT 102
Query: 316 TCRFDH-PYAGYPINYGLSLPPL 337
C F H PY ++ G + PPL
Sbjct: 103 RCHFIHTPYDV--LSAGSAHPPL 123
>gi|509778|emb|CAA55592.1| ERF-2 [Homo sapiens]
Length = 492
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|403213677|emb|CCK68179.1| hypothetical protein KNAG_0A05120 [Kazachstania naganishii CBS
8797]
Length = 290
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G CKYG C+F H + +N ++P C+N+ G C +G
Sbjct: 180 CESFTTKGFCKYGNKCQFAHGLHELNFKTFTN----NFRTKP----CNNWQKLGYCPYGK 231
Query: 316 TCRFDH 321
CRF H
Sbjct: 232 RCRFKH 237
>gi|390604243|gb|EIN13634.1| hypothetical protein PUNSTDRAFT_117353 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 814
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+YG C+F H +E + A + IC + + G C +G
Sbjct: 509 CRSWEEKGTCRYGTKCQFAHGEEELRVVARH--------PKYKTEICRTFWVSGSCPYGK 560
Query: 316 TCRFDH 321
C F H
Sbjct: 561 RCCFIH 566
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 34/78 (43%), Gaps = 15/78 (19%)
Query: 82 YREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCP 141
Y+ EL C + + GTC+YG+ C++ H G ++ + + C
Sbjct: 504 YKTEL--------CRSWEEKGTCRYGTKCQFAH-------GEEELRVVARHPKYKTEICR 548
Query: 142 YYMRTGSCKFGVACKFHH 159
+ +GSC +G C F H
Sbjct: 549 TFWVSGSCPYGKRCCFIH 566
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 33/75 (44%), Gaps = 12/75 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + G C YG+ C+F H A+ +Y+ E+ C + +G+C YG
Sbjct: 509 CRSWEEKGTCRYGTKCQFAHGEEELRVVARHPKYKTEI--------CRTFWVSGSCPYGK 560
Query: 109 TCKYHHPKDRNGAGP 123
C + H + G+ P
Sbjct: 561 RCCFIHTELPAGSAP 575
>gi|408690392|gb|AFU81656.1| C3H-type transcription factor, partial [Zea mays subsp. mays]
Length = 691
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 47/121 (38%), Gaps = 34/121 (28%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
+P +P C FY G C G+NC+F+H + P +P C ++ G+C
Sbjct: 431 KPKKP-CHFYDH-GKCRQGNNCKFSH-----------DFTPSTKSKP-CTHF-ACGSCLX 475
Query: 107 GSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLG 166
G C Y H + C Y G+C G CKF H P++ G
Sbjct: 476 GEECPYDHELSK-------------------YECHNYKNNGTCARGDNCKFSHVMPTTEG 516
Query: 167 T 167
T
Sbjct: 517 T 517
>gi|332227305|ref|XP_003262835.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Nomascus
leucogenys]
Length = 500
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H + + + + L + +C + G C +GP
Sbjct: 159 CRPFEESGMCKYGEKCQFAHGFHEL--RSLTRLQNLTRHPKYKTELCRTFHTIGFCPYGP 216
Query: 316 TCRFDH 321
C F H
Sbjct: 217 RCHFIH 222
>gi|17562800|ref|NP_505172.1| Protein POS-1 [Caenorhabditis elegans]
gi|3767590|dbj|BAA33854.1| cytoplasmic zinc-finger protein [Caenorhabditis elegans]
gi|373254396|emb|CCD70802.1| Protein POS-1 [Caenorhabditis elegans]
Length = 264
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 19/74 (25%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--------GQAICSNYSM 307
C Y + C YG C+F H + L LP P +C +SM
Sbjct: 104 CDAYKRSQACSYGDQCRFAH-----------GVHELRLPMNPRGRNHPKYKTVLCDKFSM 152
Query: 308 YGICKFGPTCRFDH 321
G CK+G C+F H
Sbjct: 153 TGNCKYGTRCQFIH 166
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 11/68 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL-PERNGQPD-----CGYYLKTGTCKY 106
C Y+R+ C YG CRF H + + R + P P C + TG CKY
Sbjct: 104 CDAYKRSQACSYGDQCRFAHGVH-----ELRLPMNPRGRNHPKYKTVLCDKFSMTGNCKY 158
Query: 107 GSTCKYHH 114
G+ C++ H
Sbjct: 159 GTRCQFIH 166
Score = 38.5 bits (88), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 37/91 (40%), Gaps = 24/91 (26%)
Query: 83 REELPERNGQPD------CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM--- 133
REE+ + + D C Y ++ C YG C++ H + L LPM
Sbjct: 86 REEMMRQRRKEDAFKTALCDAYKRSQACSYGDQCRFAH----------GVHELRLPMNPR 135
Query: 134 -----RQDEKSCPYYMRTGSCKFGVACKFHH 159
+ C + TG+CK+G C+F H
Sbjct: 136 GRNHPKYKTVLCDKFSMTGNCKYGTRCQFIH 166
>gi|443694613|gb|ELT95713.1| hypothetical protein CAPTEDRAFT_222693 [Capitella teleta]
Length = 1278
Score = 40.8 bits (94), Expect = 1.2, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 26/42 (61%), Gaps = 3/42 (7%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD 94
C + TG C YGS+C+FNHP A++G++ E ER PD
Sbjct: 45 CHLWVSTGHCNYGSSCKFNHPTSASRGSK---ESNERERSPD 83
>gi|293352395|ref|XP_002727980.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Rattus norvegicus]
Length = 243
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 37/82 (45%), Gaps = 9/82 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 306
P+C +Y G C +C F H P+ +I GPL R + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRRTRRVICVNY- 151
Query: 307 MYGICKFGPTCRFDHPYAGYPI 328
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|95769571|gb|ABF57445.1| butyrate response factor 2 [Bos taurus]
Length = 318
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 155 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 206
Query: 316 TCRFDH 321
C F H
Sbjct: 207 RCHFIH 212
>gi|424512981|emb|CCO66565.1| predicted protein [Bathycoccus prasinos]
Length = 524
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR ++ TG C+Y C+F H ++ + + P Q +C Y+ G C +G
Sbjct: 332 CRSWIETGECRYNDKCQFAHGRDELR-------CVVRHPKYKTQ-VCRTYTTTGQCPYGN 383
Query: 316 TCRFDH 321
CRF H
Sbjct: 384 RCRFIH 389
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 10/76 (13%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +++TG C+Y C++ H +D + + + C Y TG C +G
Sbjct: 332 CRSWIETGECRYNDKCQFAHGRD-------ELRCVVRHPKYKTQVCRTYTTTGQCPYGNR 384
Query: 155 CKFHH---PQPSSLGT 167
C+F H P+ LGT
Sbjct: 385 CRFIHEKLPEKGVLGT 400
>gi|984509|gb|AAA91778.1| Tis11d [Homo sapiens]
Length = 482
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|135865|sp|P23949.1|TISD_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 2;
Short=ZFP36-like 2; AltName: Full=Butyrate response
factor 2; AltName: Full=Protein TIS11D
gi|202067|gb|AAA72946.1| TIS11 primary response gene [Mus musculus]
Length = 367
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 132 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 183
Query: 316 TCRFDH 321
C F H
Sbjct: 184 RCHFIH 189
>gi|402471238|gb|EJW05085.1| hypothetical protein EDEG_00798 [Edhazardia aedis USNM 41457]
Length = 293
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +TG CKYG C+F H K + ++ AIC ++ + C +G
Sbjct: 52 CRNYEDTGFCKYGDKCQFAHNKNELRYKTRHHLYKT--------AICRSFWVNNYCPYGK 103
Query: 316 TCRFDH 321
C F H
Sbjct: 104 RCCFIH 109
>gi|148706626|gb|EDL38573.1| mCG15594 [Mus musculus]
Length = 334
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 137 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 188
Query: 316 TCRFDH 321
C F H
Sbjct: 189 RCHFIH 194
>gi|313228137|emb|CBY23287.1| unnamed protein product [Oikopleura dioica]
Length = 404
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y TG C+YG C+F H + + L + +C ++ G C +G
Sbjct: 138 CRSYEETGNCRYGKKCQFAH--------SVKEVRVLNRHPKYKTEMCKSFHTNGYCPYGA 189
Query: 316 TCRFDH 321
C F H
Sbjct: 190 RCHFVH 195
>gi|156379395|ref|XP_001631443.1| predicted protein [Nematostella vectensis]
gi|156218483|gb|EDO39380.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 23/35 (65%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
QD +C +Y++TGSC+FG C HP+P S T L
Sbjct: 193 QDTVNCAFYLKTGSCRFGERCSRQHPRPPSSVTLL 227
>gi|426335364|ref|XP_004029195.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2 [Gorilla
gorilla gorilla]
Length = 464
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|402224498|gb|EJU04560.1| hypothetical protein DACRYDRAFT_62698, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 314
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 20/108 (18%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G +C F H + P+C +Y K G C G C Y HPK+R
Sbjct: 125 GLCKKGESCEFLHEYNLRK-------------MPECWWYAKYGYCSAGDECLYTHPKERK 171
Query: 120 GAGP---VSFNILGLPMRQDEKS---CPYYMRTGSCKFGVACKFHHPQ 161
P F LG + C Y+ +G C G C HP+
Sbjct: 172 IDCPDYARGFCPLGPKCERKHARRVPCQNYL-SGFCPLGKECALAHPK 218
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 32/79 (40%), Gaps = 6/79 (7%)
Query: 254 PDCRYYMNTGTCKYGADCKFHHPKERIAQ--SAASNIGPLGLPSRPGQAI---CSNYSMY 308
P+C +Y G C G +C + HPKER A PLG A C NY +
Sbjct: 145 PECWWYAKYGYCSAGDECLYTHPKERKIDCPDYARGFCPLGPKCERKHARRVPCQNY-LS 203
Query: 309 GICKFGPTCRFDHPYAGYP 327
G C G C HP P
Sbjct: 204 GFCPLGKECALAHPKWELP 222
>gi|350041023|dbj|GAA38838.1| tristetraprolin [Clonorchis sinensis]
Length = 255
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 13/93 (13%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH----PAYAAQGAQY 82
+++H Q Q + Y AR CL Y++ C G NC F H + +Y
Sbjct: 160 MQVHKRQHMPR-KQDAIYNARYKTQPCLHYQKHKRCPLGENCHFAHGPEELLHPQSHPKY 218
Query: 83 REELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
R + C +L TGTC +G C + HP
Sbjct: 219 RTRM--------CMNFLYTGTCPFGKKCYFVHP 243
>gi|449495327|ref|XP_002187164.2| PREDICTED: zinc finger CCCH domain-containing protein 3
[Taeniopygia guttata]
Length = 1136
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNG------------QPDCGYY 98
C++Y R G C G +C + H P A ++ R + +G P C YY
Sbjct: 783 CMYYNRFGKCNRGESCPYIHDPEKVAVCTRFLRGTCKKTDGTCPFSHKVSKDKMPVCSYY 842
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PMRQDEKS-----CPYYMRTGSCKFG 152
LK G C S C Y H A + G PM + K CP + + G C G
Sbjct: 843 LK-GICS-NSNCPYSHVYVSRKAEVCQDFLKGYCPMGEKCKKKHTLVCPDFAKKGVCPKG 900
Query: 153 VACKFHHPQ 161
CK HPQ
Sbjct: 901 AQCKLLHPQ 909
>gi|351696721|gb|EHA99639.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2 [Heterocephalus glaber]
Length = 511
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 185 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSSTLLIRSMFTTFG 230
>gi|356574074|ref|XP_003555177.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Glycine max]
Length = 160
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 13/67 (19%)
Query: 223 YSSRNQGDLGAGAQMHIL-------------SASSQNLPERPDQPDCRYYMNTGTCKYGA 269
Y + D A + H+L S Q +P P++ C +++NTG C+YG
Sbjct: 7 YCEKQFQDTAADRKRHVLGIQQQQAKARWYDSFKQQQIPPVPNRSLCFHFVNTGFCRYGD 66
Query: 270 DCKFHHP 276
CK+ HP
Sbjct: 67 SCKYLHP 73
>gi|224012423|ref|XP_002294864.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220969303|gb|EED87644.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 810
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 40/102 (39%), Gaps = 16/102 (15%)
Query: 30 HDNQEGGGVAQASPYPARPGEPD--------CLFYRRTGLCGYGSNCRFNHPAYAAQGAQ 81
+D+ GG + + S G P C + G C + NC F H + +
Sbjct: 199 YDSSNGGAMYRYSSPTKMSGSPANTKLKTEMCRNILKIGYCQFKENCHFAHSKEELRKFE 258
Query: 82 YREELPERNGQPD--------CGYYLKTGTCKYGSTCKYHHP 115
EE+ E D C + + TG+C YG+ CK HP
Sbjct: 259 TVEEMHEAGLITDPKNYMARPCFFGVSTGSCPYGARCKSLHP 300
>gi|66801291|ref|XP_629571.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
gi|74850928|sp|Q54CU9.1|DUS3L_DICDI RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|60462949|gb|EAL61146.1| CCCH-type zinc finger-containing protein [Dictyostelium discoideum
AX4]
Length = 671
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 44/104 (42%), Gaps = 27/104 (25%)
Query: 264 TCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPY 323
C++ CKF H E+ S +IG IC N+ YG CK+G C F +
Sbjct: 113 VCEFNETCKFSHDVEKYLASKPKSIG-----------ICQNFQTYGECKYGLNCYFGECH 161
Query: 324 AGYPINYGLSLPPLSILDS-SLMNHQAISATHSIETSPDASSKI 366
I+D+ +++N + I ++T + S++I
Sbjct: 162 ---------------IVDNKTIVNKELIGKVEPVKTLNEVSNEI 190
>gi|355778689|gb|EHH63725.1| hypothetical protein EGM_16749 [Macaca fascicularis]
Length = 338
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 30/79 (37%), Gaps = 8/79 (10%)
Query: 243 SSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAIC 302
S Q P R CR + G CKYG C+F H + L + +C
Sbjct: 107 SGQGNPSRYKTELCRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELC 158
Query: 303 SNYSMYGICKFGPTCRFDH 321
+ G C +GP C F H
Sbjct: 159 RTFHTIGFCPYGPRCHFIH 177
>gi|395731886|ref|XP_003775975.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2-like [Pongo abelii]
Length = 489
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|301106378|ref|XP_002902272.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098892|gb|EEY56944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 528
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 64/321 (19%), Positives = 108/321 (33%), Gaps = 83/321 (25%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH------------PKDR--------- 118
AQ REEL ++ + C + + G C G CK+ H P +R
Sbjct: 201 AQAREELQKKLKKGVC-HKFQQGQCTRGDACKFAHVMQDQDAEELVQPAERPVSGIATPG 259
Query: 119 NGAGPVSFNILGLPMRQDEKS------CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLT 172
G V G PM + ++ C + + G CK G ACKF H + + L
Sbjct: 260 ASLGAVESESTG-PMTEQTQATSDAPVCINFQK-GKCKRGAACKFQHLHGNG-NDEMSLE 316
Query: 173 GNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
N + ++ P A AP Y + + G
Sbjct: 317 ENVKMETVRQDAAPEEEETQAD-EGAPVCENY--------------------QKGKCKRG 355
Query: 233 AGAQMHILSASSQNLPERPDQP------------------DCRYYMNTGTCKYGADCKFH 274
A + ++A ++ E ++ CR + G+C GA C+F
Sbjct: 356 AACRFRHVAAPAEGYQEPEEESWKAPARVALPVAAVAEVAVCRNFQR-GSCMRGASCRFA 414
Query: 275 HPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSL 334
H + + A+ + + + Q++C N+ G C G C F H A
Sbjct: 415 HTGQAPQAAPATAVEEVSEYQKRFQSVCYNWQSTGSCARGENCPFQHDGA---------- 464
Query: 335 PPLSILDSSLMNHQAISATHS 355
+++ + +A+ A S
Sbjct: 465 --FEEVETKKIKQEAVEAVES 483
>gi|47212350|emb|CAF93268.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 313
CR + TGTCKYG+ C+F H + + GL P C + +G C +
Sbjct: 143 CRGFQETGTCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 192
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 193 GSRCHFIH 200
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ TG C YGS C+F H +G YR P+ +P C + G C YGS C +
Sbjct: 143 CRGFQETGTCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CRTFYNFGYCPYGSRCHF 198
Query: 113 HH 114
H
Sbjct: 199 IH 200
>gi|354546718|emb|CCE43450.1| hypothetical protein CPAR2_210940 [Candida parapsilosis]
Length = 220
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 53/133 (39%), Gaps = 17/133 (12%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQSAASNIGPLG----LPSRPGQAICSNYSM 307
P+C +Y G C G++C + H P+ +I + N G SR + Y M
Sbjct: 97 PECLFYSKNGYCTQGSECLYQHIDPQSKIPECMNYNAGFCAEGPNCKSRHVRRTICPYYM 156
Query: 308 YGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDA--SSK 365
G C GP C HP Y N L + P I +A A S E D S+
Sbjct: 157 AGFCPQGPECEHTHPKFDYH-NLYLRIKPDPI--------RATQAESSGEEEKDGVMVSQ 207
Query: 366 IPNWVQNSDAVSV 378
I S+A+SV
Sbjct: 208 IEGNASESNAISV 220
Score = 37.7 bits (86), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 41/111 (36%), Gaps = 35/111 (31%)
Query: 51 PDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTC 110
P+CLFY + G C GS C + H + ++ P+C Y G C G C
Sbjct: 97 PECLFYSKNGYCTQGSECLYQH-------------IDPQSKIPECMNY-NAGFCAEGPNC 142
Query: 111 KYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQ 161
K H + CPYYM G C G C+ HP+
Sbjct: 143 KSRHVR--------------------RTICPYYM-AGFCPQGPECEHTHPK 172
>gi|348510817|ref|XP_003442941.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like
[Oreochromis niloticus]
Length = 372
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 149 CRPFEENGSCKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 200
Query: 316 TCRFDH 321
C F H
Sbjct: 201 RCHFIH 206
>gi|147904354|ref|NP_001080610.1| zinc finger protein 36, C3H1 type-like 2-A [Xenopus laevis]
gi|82176684|sp|Q7ZXW9.1|TISDA_XENLA RecName: Full=Zinc finger protein 36, C3H1 type-like 2-A; AltName:
Full=CCCH zinc finger protein 3; Short=XC3H-3
gi|28278580|gb|AAH44086.1| Zfp36l2-prov protein [Xenopus laevis]
Length = 363
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 137 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 188
Query: 316 TCRFDH 321
C F H
Sbjct: 189 RCHFIH 194
>gi|902735|emb|CAA60414.1| Lee1p [Saccharomyces cerevisiae]
Length = 301
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 173 GNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
GNA S ++ + +S +Q +P +N N+ LS G+ L +SSR Q +
Sbjct: 15 GNARRNSQSANEMLASQIQDFQNIPR-SFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIM 72
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
+ I +SQ + P C+++ G C+ G+ C F H + I S+A+N
Sbjct: 73 E--HLLITKNNSQQQKDYSHVP-CKFF-KMGNCQAGSSCPFSHSPDII--SSANN----- 121
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QA 349
LP + Y G CKFG C H G+ +N S P+ I S N+ A
Sbjct: 122 LPCK--------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHA 170
Query: 350 ISATHSIETSP--DASSKIPNWVQNSDAVSVQH 380
SA+ S TSP A ++ + N++ S Q+
Sbjct: 171 RSASFSTYTSPPLSAQTEFSHSASNANFFSSQY 203
>gi|449483114|ref|XP_002194245.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Taeniopygia guttata]
Length = 644
Score = 40.8 bits (94), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 24/39 (61%)
Query: 131 LPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
L +D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 335 LGTEKDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 373
>gi|449297565|gb|EMC93583.1| hypothetical protein BAUCODRAFT_133464 [Baudoinia compniacensis
UAMH 10762]
Length = 421
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 37/94 (39%), Gaps = 18/94 (19%)
Query: 24 IWRLKIHDNQEGGGV-AQASPYPARPG--EPDCLFYRRTGLCGYGSNCRFNHPAYAAQGA 80
I + H + G + A A PARP P C + + G C YG CRF H
Sbjct: 192 IAGVDFHRTKNGNLIRASALADPARPAPLRPQCENFTKHGTCPYGPICRFTH-------- 243
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+ N C +LK GTC G +C H
Sbjct: 244 -------DPNKVAICKDFLKAGTCALGDSCDMSH 270
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 37/97 (38%), Gaps = 27/97 (27%)
Query: 233 AGAQMH------ILSASSQNLPERPD--QPDCRYYMNTGTCKYGADCKFHHPKERIAQSA 284
AG H ++ AS+ P RP +P C + GTC YG C+F H ++
Sbjct: 193 AGVDFHRTKNGNLIRASALADPARPAPLRPQCENFTKHGTCPYGPICRFTHDPNKV---- 248
Query: 285 ASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
AIC ++ G C G +C H
Sbjct: 249 ---------------AICKDFLKAGTCALGDSCDMSH 270
>gi|302830796|ref|XP_002946964.1| CCCH-type zinc finger protein [Volvox carteri f. nagariensis]
gi|300268008|gb|EFJ52190.1| CCCH-type zinc finger protein [Volvox carteri f. nagariensis]
Length = 118
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 10/71 (14%)
Query: 256 CRYYMNTGTCKYGADCK--FHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
CR + TG+C+YG+ C+ F H E + P+ + C ++ GIC++
Sbjct: 5 CRSWTETGSCRYGSKCQASFAHGPEELR--------PVVRHPKYKTEHCRTFAATGICQY 56
Query: 314 GPTCRFDHPYA 324
G CRF H A
Sbjct: 57 GNRCRFIHAAA 67
>gi|46015500|pdb|1RGO|A Chain A, Structural Basis For Recognition Of The Mrna Class Ii Au-
Rich Element By The Tandem Zinc Finger Domain Of Tis11d
Length = 70
Score = 40.4 bits (93), Expect = 1.5, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 9 CRPFEESGTCKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 60
Query: 316 TCRFDH 321
C F H
Sbjct: 61 RCHFIH 66
>gi|395847233|ref|XP_003796285.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-2 isoform 1
[Otolemur garnettii]
Length = 416
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 55/136 (40%), Gaps = 27/136 (19%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y++ G C+ GS C + H D + P + C YY + G C +
Sbjct: 5 QVTCRYFMH-GVCREGSQCLFSH--DLANSKPSTI-------------CKYYQK-GYCAY 47
Query: 152 GVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPL 211
G C++ H +PS+ ++G+M SV PSSG + G P+ + L
Sbjct: 48 GTRCRYDHTRPSA-------ASGGAVGTMPHSV-PSSG--FHGPQPSSDLTASVVKTNSL 97
Query: 212 SPTSIAGSNLIYSSRN 227
P L+ RN
Sbjct: 98 EPGKREKRTLVLRDRN 113
>gi|340505388|gb|EGR31720.1| zinc finger protein, putative [Ichthyophthirius multifiliis]
Length = 241
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 12/91 (13%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY------- 308
CR++ N G C+ G+ C F H +E + + +N P+ +P+ + +C+NY
Sbjct: 42 CRHFKN-GNCQLGSACHFAHGQEELRNT--NNPTPINVPTSQPKVLCNNYKTVKCQYFQR 98
Query: 309 GICKFGPTCRFDHPYAGYPINYGLSLPPLSI 339
G CK C F P+ + G+S P S+
Sbjct: 99 GFCKNQQACSF--PHGDEEMMSGISSFPTSV 127
>gi|449270924|gb|EMC81567.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 2, partial [Columba livia]
Length = 453
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 154 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 188
>gi|356513935|ref|XP_003525663.1| PREDICTED: zinc finger CCCH domain-containing protein 34-like
[Glycine max]
Length = 524
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 59/153 (38%), Gaps = 21/153 (13%)
Query: 52 DCLFYRRTGL-CGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTC 110
DC+++ + L C G+ C + H A R DC Y+L +G C TC
Sbjct: 11 DCVYFLASPLTCKKGAECEYRHNEIA------------RLNPRDCWYWL-SGQC-LNPTC 56
Query: 111 KYHHPKDRNGAG---PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGT 167
+ HP G P LP + C Y+ GSC G C F H S+ T
Sbjct: 57 AFRHPPLDGHTGASVPSEPTQTSLPANKTMVPC-YFFFNGSCNKGDRCSFLHGPDDSIFT 115
Query: 168 ALPLTG-NASLGSMGSSVLPSSGLQYAGIVPAP 199
P+ N S ++ SSG G+V P
Sbjct: 116 VKPVKNDNGSTDALNLENKTSSG-NRIGLVSTP 147
>gi|403269875|ref|XP_003926933.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2, partial
[Saimiri boliviensis boliviensis]
Length = 332
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +GTCKYG C+F H + L + +C + G C +GP
Sbjct: 159 CRPFEESGTCKYGEKCQFAHGFHELRS--------LTRHPKYKTELCRTFHTIGFCPYGP 210
Query: 316 TCRFDH 321
C F H
Sbjct: 211 RCHFIH 216
>gi|395841461|ref|XP_003793555.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 491
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Query: 123 PVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
PV I M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 158 PVDLRI----MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFG 209
>gi|350595997|ref|XP_003360579.2| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Sus scrofa]
Length = 407
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D CP+Y++TG+C+FG C H P+S T L + + G
Sbjct: 136 MEKDRAHCPFYIKTGACRFGDKCSRKHSFPASSPTLLIKSMFTTFG 181
>gi|326913598|ref|XP_003203123.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Meleagris gallopavo]
Length = 473
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 168 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 202
>gi|195478028|ref|XP_002100381.1| GE17025 [Drosophila yakuba]
gi|194187905|gb|EDX01489.1| GE17025 [Drosophila yakuba]
Length = 448
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 44/112 (39%), Gaps = 21/112 (18%)
Query: 219 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 269
S+L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 110 SSLVTITENLGNMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 165
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C+F H + + + + C + G C +GP C F H
Sbjct: 166 KCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 209
>gi|170086856|ref|XP_001874651.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649851|gb|EDR14092.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1419
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 31/73 (42%), Gaps = 11/73 (15%)
Query: 52 DCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE----------RNGQPDCGYYLKT 101
+CLF+ G C G+ C F H EE+ E + Q C ++ K
Sbjct: 442 ECLFFS-LGKCRNGTACPFQHVPSKEPATSQPEEVDEGWDGPQSSSRQRSQKRCNHFAKR 500
Query: 102 GTCKYGSTCKYHH 114
G C YGS+C Y H
Sbjct: 501 GVCPYGSSCNYSH 513
>gi|118779804|ref|XP_309752.3| AGAP010954-PA [Anopheles gambiae str. PEST]
gi|116131343|gb|EAA05601.3| AGAP010954-PA [Anopheles gambiae str. PEST]
Length = 226
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y G CKYG C+F H + + L + +C + G C +GP
Sbjct: 95 CRPYEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 146
Query: 316 TCRFDH 321
C F H
Sbjct: 147 RCHFVH 152
>gi|402074044|gb|EJT69596.1| hypothetical protein GGTG_13212 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 930
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 47/113 (41%), Gaps = 22/113 (19%)
Query: 47 RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKY 106
RP C F+ R G C G++C F H E P C +Y G C +
Sbjct: 8 RPTRAPCTFFAR-GRCTRGASCPFVH-----------EVGPAPKPIKPC-HYFAAGHCAH 54
Query: 107 GSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
G++C++ H +DR A LP + + C Y+ G C G C+F H
Sbjct: 55 GNSCRFAHSRDRVVAAE------ALPPKTE--VCRYFA-AGRCTKGEECRFAH 98
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 91/248 (36%), Gaps = 35/248 (14%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKT 101
+P P +P Y G C +G++CRF H A E LP + + Y
Sbjct: 37 APKPIKP-----CHYFAAGHCAHGNSCRFAHSRDRVVAA---EALPPKT---EVCRYFAA 85
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQD-EKSCP-YYMRTGSCKFGVACKFHH 159
G C G C++ H +R GA P +D K P ++ G C+ G AC F H
Sbjct: 86 GRCTKGEECRFAHV-NRAGAQ-------NKPTPEDPRKRVPCHFFAVGGCRNGDACPFLH 137
Query: 160 PQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGS 219
+ L A+ + + L ++ G G+ + S+A
Sbjct: 138 DLALQVEEELDPVAEAARFCLETDDLVDDWIRVID-----GAVVKFGDGASVQTISLASD 192
Query: 220 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHP--- 276
+S+ +L +G+ ++ + + L R + D + AD K P
Sbjct: 193 ---FSAIRLDNLPSGSTATSVAGALRKLGVRVQEEDVKVRPGVVGANDSADIKVEDPSFA 249
Query: 277 ---KERIA 281
+ER+A
Sbjct: 250 ARVRERLA 257
>gi|17570419|ref|NP_510397.1| Protein Y60A9.3 [Caenorhabditis elegans]
gi|6425437|emb|CAB60410.1| Protein Y60A9.3 [Caenorhabditis elegans]
Length = 203
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 3/61 (4%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD-CGYYLKTGTCKYGSTCKYH 113
F+RR C YG C+F H + + Q + RN + C + TG CKYG C++
Sbjct: 96 FHRRGQKCAYGEKCKFAHSVHELRFPQTKRN--HRNYKTVLCNKFSTTGHCKYGIRCQFI 153
Query: 114 H 114
H
Sbjct: 154 H 154
>gi|432855626|ref|XP_004068278.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
[Oryzias latipes]
Length = 862
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 51/129 (39%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAA------QGAQYREE-------LPERNGQPDCGYY 98
C++Y R G C G++C F H P A +G RE+ + P C Y+
Sbjct: 644 CMYYNRFGKCNRGTSCTFIHDPDKVAVCTRFLRGTCKREDGTCPFSHKVSKEKMPVCSYF 703
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL------PMRQDEKSCPYYMRTGSCKFG 152
LK G C S C Y H + A + G ++ C + +TGSC G
Sbjct: 704 LK-GICN-NSDCPYSHVYVSSKAEVCEDFVKGYCPEGEKCKKKHTLVCSDFFKTGSCSRG 761
Query: 153 VACKFHHPQ 161
CK H Q
Sbjct: 762 SRCKLQHRQ 770
>gi|403414935|emb|CCM01635.1| predicted protein [Fibroporia radiculosa]
Length = 2146
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+Y A C+F H +E + + + + IC + + G C +G
Sbjct: 1842 CRSWEEKGTCRYSAKCQFAHGEEELRKVSRH--------PKYKTEICRTFWVSGSCPYGK 1893
Query: 316 TCRFDH 321
C F H
Sbjct: 1894 RCCFIH 1899
>gi|363728701|ref|XP_425572.3| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Gallus gallus]
Length = 473
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 23/35 (65%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
+D +CP+Y++TGSC+FG C H P+S T L
Sbjct: 168 KDRANCPFYIKTGSCRFGDRCSRKHNYPTSSKTLL 202
>gi|440634688|gb|ELR04607.1| hypothetical protein GMDG_06889 [Geomyces destructans 20631-21]
Length = 442
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 69/167 (41%), Gaps = 37/167 (22%)
Query: 37 GVAQASPYPARPGEPD--CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY----------- 82
G+ +A PA + D C + TG+C G CR+ H P A +
Sbjct: 238 GILKAQRKPAAIKKIDEPCRLFSTTGVCPKGPRCRYTHDPTKVAICKDFLQTGTCAASDS 297
Query: 83 ----REELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPV--SFNILGLPMRQ- 135
E PER P C ++ + G C C+Y H + + + PV +F + G R
Sbjct: 298 CDLSHEATPERT--PACLHFAR-GNCA-NENCRYAHVRV-SASAPVCRAFAVYGYCERGA 352
Query: 136 --DEK---SCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL 177
DE+ CP + RTG CK CK H +S+ L NA++
Sbjct: 353 ECDERHVVECPEFSRTGECKTK-GCKLPHRLKASI-----LRKNAAM 393
>gi|357624170|gb|EHJ75049.1| hypothetical protein KGM_19145 [Danaus plexippus]
Length = 265
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 112 CRPFEEAGVCKYGDKCQFAH--------GVRELRNLQRHPKYKTELCRTFHSVGFCPYGP 163
Query: 316 TCRFDH 321
C F H
Sbjct: 164 RCHFVH 169
>gi|348508156|ref|XP_003441621.1| PREDICTED: hypothetical protein LOC100704231 [Oreochromis
niloticus]
Length = 404
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 34/69 (49%), Gaps = 4/69 (5%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ TG C YGS C+F H +G YR P+ +P C + G C YGS C +
Sbjct: 141 CRGFQETGSCKYGSKCQFAHGEAELRGL-YRH--PKYKTEP-CRTFYNFGYCPYGSRCHF 196
Query: 113 HHPKDRNGA 121
H + + A
Sbjct: 197 IHEEKISDA 205
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAI--CSNYSMYGICKF 313
CR + TG+CKYG+ C+F H + + GL P C + +G C +
Sbjct: 141 CRGFQETGSCKYGSKCQFAHGEAELR----------GLYRHPKYKTEPCRTFYNFGYCPY 190
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 191 GSRCHFIH 198
>gi|330805000|ref|XP_003290476.1| hypothetical protein DICPUDRAFT_154989 [Dictyostelium purpureum]
gi|325079404|gb|EGC33006.1| hypothetical protein DICPUDRAFT_154989 [Dictyostelium purpureum]
Length = 429
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 53/132 (40%), Gaps = 30/132 (22%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCK- 111
C F+ LC G C ++HP+ P C Y + CKYG++C
Sbjct: 241 CQFW---PLCRNGEACIYHHPSIQCSN------FPNCTFGNKCLYIHPSIPCKYGTSCTN 291
Query: 112 ----YHHPKDRNGAGPVSFNILGLPMRQ-----DEKSCPYYMRTGSCKFGVACK------ 156
Y+HP+ P + +P R + K+C +Y +CKFG AC
Sbjct: 292 PDCVYNHPQ-----RPAVPTMAEIPCRNGFACPNRKTCGFYHPPPACKFGTACNMGRNCP 346
Query: 157 FHHPQPSSLGTA 168
F H +P S G +
Sbjct: 347 FGHGKPCSFGIS 358
>gi|6325203|ref|NP_015271.1| Lee1p [Saccharomyces cerevisiae S288c]
gi|51701649|sp|Q02799.1|LEE1_YEAST RecName: Full=Zinc finger protein LEE1
gi|1079688|gb|AAB68311.1| Lee1p [Saccharomyces cerevisiae]
gi|51013597|gb|AAT93092.1| YPL054W [Saccharomyces cerevisiae]
gi|190407896|gb|EDV11161.1| zinc finger protein LEE1 [Saccharomyces cerevisiae RM11-1a]
gi|207340508|gb|EDZ68838.1| YPL054Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|285815484|tpg|DAA11376.1| TPA: Lee1p [Saccharomyces cerevisiae S288c]
gi|392295955|gb|EIW07058.1| Lee1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 301
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 173 GNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
GNA S ++ + +S +Q +P +N N+ LS G+ L +SSR Q +
Sbjct: 15 GNARRNSQSANEMLASQIQDFQNIPR-SFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIM 72
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
+ I +SQ + P C+++ G C+ G+ C F H + I S+A+N
Sbjct: 73 E--HLLITKNNSQQQKDYSHVP-CKFF-KMGNCQAGSSCPFSHSPDII--SSANN----- 121
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QA 349
LP + Y G CKFG C H G+ +N S P+ I S N+ A
Sbjct: 122 LPCK--------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHA 170
Query: 350 ISATHSIETSP--DASSKIPNWVQNSDAVSVQH 380
SA+ S TSP A ++ + N++ S Q+
Sbjct: 171 RSASFSTYTSPPLSAQTEFSHSASNANYFSSQY 203
>gi|323331246|gb|EGA72664.1| Lee1p [Saccharomyces cerevisiae AWRI796]
Length = 301
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 29/213 (13%)
Query: 173 GNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLG 232
GNA S ++ + +S +Q +P +N N+ LS G+ L +SSR Q +
Sbjct: 15 GNARRNSQSANEMLASQIQDFQNIPR-SFNDSNANVN-LSKNCTVGNQLPFSSRQQKIIM 72
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
+ I +SQ + P C+++ G C+ G+ C F H + I S+A+N
Sbjct: 73 E--HLLITKNNSQQQKDYSHVP-CKFF-KMGNCQAGSSCPFSHSPDII--SSANN----- 121
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDHPY-AGYPINYGLSLPPLSILDSSLMNH--QA 349
LP + Y G CKFG C H G+ +N S P+ I S N+ A
Sbjct: 122 LPCK--------YFAKGNCKFGNKCVNAHVLPNGFKMN---SKEPIDITPPSQNNYLSHA 170
Query: 350 ISATHSIETSP--DASSKIPNWVQNSDAVSVQH 380
SA+ S TSP A ++ + N++ S Q+
Sbjct: 171 RSASFSTYTSPPLSAQTEFSHSASNANYFSSQY 203
>gi|223649192|gb|ACN11354.1| Butyrate response factor 1 [Salmo salar]
Length = 400
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHH---PKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 312
CR Y +GTCKYGA C+F H + +++ P C + G C
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGTDEQRDLSRHPKYKTEP-----------CRTFHTIGFCP 210
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 211 YGARCHFIH 219
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 46/115 (40%), Gaps = 22/115 (19%)
Query: 38 VAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL---PERNGQPD 94
+A + P R C Y +G C YG+ C+F H G + +L P+ +P
Sbjct: 147 LAPSPPISTRYKTEMCRTYEESGTCKYGAKCQFAH------GTDEQRDLSRHPKYKTEP- 199
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDR----NGAGPVSFNILGLPMRQDEKSCPYYMR 145
C + G C YG+ C + H D +G P P RQ + P +R
Sbjct: 200 CRTFHTIGFCPYGARCHFIHNADEQLGPDGGAP--------PQRQKMRERPQLLR 246
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 30/72 (41%), Gaps = 7/72 (9%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y ++GTCKYG+ C++ H D L + + C + G C +G
Sbjct: 162 CRTYEESGTCKYGAKCQFAHGTDEQ-------RDLSRHPKYKTEPCRTFHTIGFCPYGAR 214
Query: 155 CKFHHPQPSSLG 166
C F H LG
Sbjct: 215 CHFIHNADEQLG 226
>gi|325188682|emb|CCA23213.1| tRNAdihydrouridine synthase 3 putative [Albugo laibachii Nc14]
Length = 637
Score = 40.4 bits (93), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 249 ERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMY 308
E P CR+ + C+YG CKF H + + +I P C + +
Sbjct: 58 EDPSDVLCRFLAVSKPCEYGERCKFSHEIKDFMKRKPKDIHPY----------CPIFESF 107
Query: 309 GICKFGPTCRF 319
G C++G CRF
Sbjct: 108 GECEYGLKCRF 118
>gi|449492653|ref|XP_004159062.1| PREDICTED: uncharacterized protein LOC101224393 [Cucumis sativus]
Length = 1341
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 24/114 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC S C+ H +PER PDC Y+L+ G C C Y H + N
Sbjct: 1140 GLCSNAS-CKLTHKV-----------IPER--MPDCSYFLQ-GLCS-SKNCAYRHV-NVN 1182
Query: 120 GAGPV------SFNILGLPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPSSLG 166
P + LG R+ CP TG+C CK HHP+ + G
Sbjct: 1183 SKVPTCEAFLRGYCALGNECRKKHSYVCPLLEATGTCPDRSTCKLHHPKRQTKG 1236
>gi|189520842|ref|XP_689680.3| PREDICTED: zinc finger CCCH domain-containing protein 3 [Danio
rerio]
Length = 929
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNG------------QPDCGYY 98
C++Y R G C +G+ C + H P A ++ R + +G P C Y+
Sbjct: 699 CMYYNRFGKCNHGNTCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHKVAKEKMPVCSYF 758
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDE------KSCPYYMRTGSCKFG 152
LK G C S+C Y H A + G + D+ CP + TG C G
Sbjct: 759 LK-GICN-NSSCPYSHVYVSRKAEVCEDFVRGYCPQGDKCKKKHTLVCPDFSSTGVCPRG 816
Query: 153 VACKFHHPQ 161
CK HH Q
Sbjct: 817 SKCKLHHRQ 825
>gi|303285404|ref|XP_003061992.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456403|gb|EEH53704.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 418
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 41/100 (41%), Gaps = 21/100 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
G C G +CRF+H A + P+R+ P Y + G C G C++ H D N
Sbjct: 339 GECTRGDSCRFSHDPNA--------QTPQRSSAP--CYAFQKGECSRGDACRFSH--DPN 386
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
F G +C Y + G C G AC+F H
Sbjct: 387 AVSGGGFKASG--------TC-YAFQKGECTRGDACRFSH 417
>gi|334328570|ref|XP_001368672.2| PREDICTED: tristetraprolin-like [Monodelphis domestica]
Length = 400
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 35/70 (50%), Gaps = 13/70 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAY---AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C + +G C YGS C+F H P A++ +Y+ EL C L G+C YGS
Sbjct: 164 CRTFSESGKCRYGSKCQFAHGPGELRPASRHPKYKTEL--------CRKLLILGSCPYGS 215
Query: 109 TCKY-HHPKD 117
C + H+P D
Sbjct: 216 RCHFIHYPSD 225
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 15/86 (17%)
Query: 74 AYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPM 133
A AA ++Y+ EL C + ++G C+YGS C++ H GP
Sbjct: 151 AGAASSSRYKTEL--------CRTFSESGKCRYGSKCQFAH-------GPGELRPASRHP 195
Query: 134 RQDEKSCPYYMRTGSCKFGVACKFHH 159
+ + C + GSC +G C F H
Sbjct: 196 KYKTELCRKLLILGSCPYGSRCHFIH 221
>gi|118382894|ref|XP_001024603.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila]
gi|89306370|gb|EAS04358.1| hypothetical protein TTHERM_00301750 [Tetrahymena thermophila
SB210]
Length = 383
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 43/111 (38%), Gaps = 14/111 (12%)
Query: 220 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD--------CRYYMNTGTCKYGADC 271
NL+ +N Q + + NL + P+Q + C+ +M G C YG C
Sbjct: 181 NLVQKKKNSFGSSNMNQQPLQQSQLNNLTQGPNQQETSKFKTEMCKNWMEFGKCNYGKKC 240
Query: 272 KFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHP 322
+F H K + + N + +C+++ C +G C F H
Sbjct: 241 QFAHGKNELVDKSTVN------KRQYKSKLCNSFHTQKFCPYGNRCMFIHE 285
>gi|162287133|ref|NP_001089645.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|71681229|gb|AAI00163.1| MGC114600 protein [Xenopus laevis]
Length = 345
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 316 TCRFDH 321
C F H
Sbjct: 173 RCHFIH 178
>gi|229594940|ref|XP_001020846.3| hypothetical protein TTHERM_00411520 [Tetrahymena thermophila]
gi|225566487|gb|EAS00601.3| hypothetical protein TTHERM_00411520 [Tetrahymena thermophila
SB210]
Length = 272
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 35/74 (47%), Gaps = 8/74 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQ--------SAASNIGPLGLPSRPGQAICSNYSM 307
CR++ +G C+ GA C F H +E + + +N+ + + ++I Y+
Sbjct: 19 CRHWQTSGNCQIGAKCHFAHGQEELRNPNDPIKDATVIANVLSNPIQIQSYKSIRCKYND 78
Query: 308 YGICKFGPTCRFDH 321
G C++G C F H
Sbjct: 79 IGACRYGQACYFSH 92
Score = 38.1 bits (87), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 9/77 (11%)
Query: 95 CGYYLKTGTCKYGSTCKYHH-------PKDRNGAGPVSFNILGLPMR-QDEKSCP-YYMR 145
C ++ +G C+ G+ C + H P D V N+L P++ Q KS Y
Sbjct: 19 CRHWQTSGNCQIGAKCHFAHGQEELRNPNDPIKDATVIANVLSNPIQIQSYKSIRCKYND 78
Query: 146 TGSCKFGVACKFHHPQP 162
G+C++G AC F H +P
Sbjct: 79 IGACRYGQACYFSHGEP 95
>gi|294952825|ref|XP_002787468.1| hypothetical protein Pmar_PMAR015824 [Perkinsus marinus ATCC 50983]
gi|239902470|gb|EER19264.1| hypothetical protein Pmar_PMAR015824 [Perkinsus marinus ATCC 50983]
Length = 598
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 23/135 (17%)
Query: 26 RLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREE 85
RL + D+ EG + + C Y G C YG C F H A E
Sbjct: 186 RLTVGDSNEGTKIDVSKQLLK---TRVCKLYLE-GKCRYGKKCYFAH------NADELRE 235
Query: 86 LPERNGQPDCGYYLKTGTCKYGSTCKYHH-PKDRNGAGPVSFNILGLPMRQDEKSCPYYM 144
P C Y + G C G CKY H PK+ V +++ C ++
Sbjct: 236 PPNLRKTTLCRLYAQ-GKCTLGDDCKYAHGPKELRATEGVYKSVV----------CNWW- 283
Query: 145 RTGSCKFGVACKFHH 159
+ G C++G C+F H
Sbjct: 284 KQGHCQYGSRCRFAH 298
>gi|410912868|ref|XP_003969911.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Takifugu rubripes]
gi|4741995|gb|AAD28792.1|AF146688_1 U2 small nuclear ribonucleoprotein auxiliary factor subunit-related
protein [Takifugu rubripes]
Length = 605
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
N P++ N +D +CP++++TGSC+FG C H P++ T + + + G
Sbjct: 153 NPEAPLTVNSENYGTERDVSNCPFFLKTGSCRFGDRCSRKHVYPTASPTMMIRSMFKTFG 212
>gi|301116960|ref|XP_002906208.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262107557|gb|EEY65609.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 250
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 28/64 (43%), Gaps = 4/64 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + G C YGS C+F H +G + C +L TG C YGS C++
Sbjct: 48 CKHFTENGSCRYGSKCQFAHGEEELRGVLRHPKYKTTR----CKAFLSTGKCMYGSRCRF 103
Query: 113 HHPK 116
H +
Sbjct: 104 IHTR 107
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%), Gaps = 15/86 (17%)
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQ 135
A+ Y+ EL C ++ + G+C+YGS C++ H ++ +L P +
Sbjct: 37 TARNNLYKTEL--------CKHFTENGSCRYGSKCQFAHGEEELRG------VLRHPKYK 82
Query: 136 DEKSCPYYMRTGSCKFGVACKFHHPQ 161
+ C ++ TG C +G C+F H +
Sbjct: 83 TTR-CKAFLSTGKCMYGSRCRFIHTR 107
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+++ G+C+YG+ C+F H +E + G L P + C + G C +G
Sbjct: 48 CKHFTENGSCRYGSKCQFAHGEEELR-------GVLRHP-KYKTTRCKAFLSTGKCMYGS 99
Query: 316 TCRFDH 321
CRF H
Sbjct: 100 RCRFIH 105
>gi|325185089|emb|CCA19581.1| AlNc14C74G5006 [Albugo laibachii Nc14]
Length = 345
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 22/34 (64%)
Query: 84 EELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKD 117
+ + ERNG+ C Y+ GTC YGS CK+ H K+
Sbjct: 99 DRIKERNGKSLCIRYITKGTCVYGSKCKFFHDKN 132
>gi|24641595|ref|NP_727633.1| Tis11 homolog, isoform B [Drosophila melanogaster]
gi|22832154|gb|AAN09314.1| Tis11 homolog, isoform B [Drosophila melanogaster]
Length = 408
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 217 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 267
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 69 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 124
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G C+F H + + C + G C +GP C F H
Sbjct: 125 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 170
>gi|50550735|ref|XP_502840.1| YALI0D14982p [Yarrowia lipolytica]
gi|74634534|sp|Q6C922.1|YTH1_YARLI RecName: Full=mRNA 3'-end-processing protein YTH1
gi|49648708|emb|CAG81028.1| YALI0D14982p [Yarrowia lipolytica CLIB122]
Length = 193
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 44/111 (39%), Gaps = 24/111 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G NC F H Y Q P+C +Y+K G C C+Y H D
Sbjct: 66 GLCKKGLNCEFLH-EYNLQKM------------PECQFYVKNGFCTQSPDCQYLH-IDPA 111
Query: 120 GAGPVSFNI-LGLPMRQDEKS--------CPYYMRTGSCKFGVACKFHHPQ 161
PV FN G E S C YM TG C G C+F HP+
Sbjct: 112 SKIPVCFNYEKGFCKMGPECSRKHIRRMPCELYM-TGFCPKGRVCEFAHPK 161
>gi|170595935|ref|XP_001902576.1| C3H-1 protein [Brugia malayi]
gi|158589673|gb|EDP28575.1| C3H-1 protein, putative [Brugia malayi]
Length = 349
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + +TG C YG C+F H + + AA P + +C+ +++YG+C +G
Sbjct: 122 CNAFRDTGQCAYGFHCRFAHGIDEL--RAAPGPHP-----KYKTRLCNKFTLYGLCPYGS 174
Query: 316 TCRFDH 321
C+F H
Sbjct: 175 HCQFIH 180
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 13/67 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA-----QYREELPERNGQPDCGYYLKTGTCKYG 107
C +R TG C YG +CRF H + A +Y+ L C + G C YG
Sbjct: 122 CNAFRDTGQCAYGFHCRFAHGIDELRAAPGPHPKYKTRL--------CNKFTLYGLCPYG 173
Query: 108 STCKYHH 114
S C++ H
Sbjct: 174 SHCQFIH 180
>gi|118404606|ref|NP_001072758.1| ZFP36 ring finger protein-like 1 [Xenopus (Silurana) tropicalis]
gi|116487406|gb|AAI25787.1| hypothetical protein MGC147385 [Xenopus (Silurana) tropicalis]
Length = 345
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 316 TCRFDH 321
C F H
Sbjct: 173 RCHFIH 178
>gi|148234376|ref|NP_001084214.1| ZFP36 ring finger protein-like 1 [Xenopus laevis]
gi|4580022|gb|AAD24208.1|AF061981_1 CCCH zinc finger protein C3H-2 [Xenopus laevis]
gi|54038156|gb|AAH84197.1| C3H-2 protein [Xenopus laevis]
Length = 345
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGSCKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 316 TCRFDH 321
C F H
Sbjct: 173 RCHFIH 178
>gi|116004517|ref|NP_001070621.1| zinc finger protein 36, C3H type-like 1a [Danio rerio]
gi|115313405|gb|AAI24506.1| Zinc finger protein 36, C3H type-like 2 [Danio rerio]
gi|182890842|gb|AAI65552.1| Zfp36l2 protein [Danio rerio]
Length = 374
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 150 CRPFEENGACKYGDKCQFAH--------GIHELRSLSRHPKYKTELCRTFHTIGFCPYGP 201
Query: 316 TCRFDH 321
C F H
Sbjct: 202 RCHFIH 207
>gi|449016249|dbj|BAM79651.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 401
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQA 300
CRYY+ G CK+G C++ HP +++ +GP G+P+ GQA
Sbjct: 4 CRYYLQ-GNCKFGDRCRYEHPPGLGGRASRQQVGP-GMPAASGQA 46
>gi|301103518|ref|XP_002900845.1| makorin-like protein [Phytophthora infestans T30-4]
gi|262101600|gb|EEY59652.1| makorin-like protein [Phytophthora infestans T30-4]
Length = 281
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +Y+ G C+YGS C + H S GL CP+Y+R G+CK+G
Sbjct: 14 CRFYV-LGKCRYGSCCTFSHTLPSQVNECASDETAGLSAAAALVDCPFYLR-GNCKYGDH 71
Query: 155 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPS 187
C+ H G + + + + G ++ S
Sbjct: 72 CRLRHNPAMLSGARVAASAHFTCGICFDDIVQS 104
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICS 303
S+++ P CR+Y+ G C+YG+ C F H AS+ GL + C
Sbjct: 2 SESVAAAPTTALCRFYV-LGKCRYGSCCTFSHTLPSQVNECASD-ETAGLSAAAALVDCP 59
Query: 304 NYSMYGICKFGPTCRFDH 321
Y + G CK+G CR H
Sbjct: 60 FY-LRGNCKYGDHCRLRH 76
>gi|348536391|ref|XP_003455680.1| PREDICTED: probable E3 ubiquitin-protein ligase makorin-1-like
[Oreochromis niloticus]
Length = 431
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 71/191 (37%), Gaps = 45/191 (23%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C Y++ G CK G C+Y H D + P S C ++ + G+C FG
Sbjct: 24 CRYFMH-GLCKEGENCRYSH--DLTSSKPASM------------ICKFFQK-GNCAFGDR 67
Query: 155 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPT 214
C+F H +P LP + L S+ LPS P P T GP+ P
Sbjct: 68 CRFEHSKPVK-NEELPASQTLPLASVS---LPSPA------DPEPSGPT----PGPVVPD 113
Query: 215 SIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQ------PDCRY----YMNTGT 264
+ + + G G + S+ L E D+ D R Y G
Sbjct: 114 WVNAAEFV-----PGQPYCGRAEPVTVESTVPLIEEFDRDPALDNEDLRKQLCPYAAVGE 168
Query: 265 CKYGADCKFHH 275
C+YG +C + H
Sbjct: 169 CRYGINCAYLH 179
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 37/86 (43%), Gaps = 19/86 (22%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+M+ G CK G +C++ H S+P IC + G C FG
Sbjct: 24 CRYFMH-GLCKEGENCRYSHDL---------------TSSKPASMICKFFQK-GNCAFGD 66
Query: 316 TCRFDH--PYAGYPINYGLSLPPLSI 339
CRF+H P + +LP S+
Sbjct: 67 RCRFEHSKPVKNEELPASQTLPLASV 92
>gi|50286627|ref|XP_445742.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525048|emb|CAG58661.1| unnamed protein product [Candida glabrata]
Length = 453
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G CKYG C+F H + + SN ++P C N+ G C +G
Sbjct: 345 CETFTTKGFCKYGNKCQFAHGLQELKLKKTSN----NFRTKP----CINWDKLGYCPYGK 396
Query: 316 TCRFDH 321
C F H
Sbjct: 397 RCCFKH 402
>gi|449281115|gb|EMC88278.1| Zinc finger CCCH domain-containing protein 3, partial [Columba
livia]
Length = 348
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 52/129 (40%), Gaps = 22/129 (17%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNG------------QPDCGYY 98
C++Y R G C G +C + H P A ++ R + +G P C Y+
Sbjct: 123 CMYYNRFGKCNRGESCPYIHDPEKVAVCTRFLRGTCKKTDGTCSFSHKVSKDKMPVCSYF 182
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG-LPMRQDEKS-----CPYYMRTGSCKFG 152
LK G C S C Y H A + G PM + K CP + + GSC G
Sbjct: 183 LK-GICN-NSNCPYSHVYVSRKAEICQDFLKGYCPMGEKCKKKHTLVCPDFAKKGSCPRG 240
Query: 153 VACKFHHPQ 161
CK HPQ
Sbjct: 241 AQCKLLHPQ 249
>gi|321466129|gb|EFX77126.1| hypothetical protein DAPPUDRAFT_9312 [Daphnia pulex]
Length = 70
Score = 40.0 bits (92), Expect = 2.2, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y GTCKYG C+F H + L + +C + G C +GP
Sbjct: 9 CRPYEENGTCKYGDKCQFAH--------GFHELRSLIRHPKYKTELCRTFHTIGFCPYGP 60
Query: 316 TCRFDH 321
C F H
Sbjct: 61 RCHFVH 66
>gi|242056885|ref|XP_002457588.1| hypothetical protein SORBIDRAFT_03g009880 [Sorghum bicolor]
gi|241929563|gb|EES02708.1| hypothetical protein SORBIDRAFT_03g009880 [Sorghum bicolor]
Length = 986
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 35/80 (43%), Gaps = 15/80 (18%)
Query: 49 GEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
G C+F+ G C G+ CRF+H + A + P C +YL C+ G+
Sbjct: 704 GTEACVFFA-NGSCNLGAACRFSHSSLAPK--------------PVCKFYLTLQGCRSGN 748
Query: 109 TCKYHHPKDRNGAGPVSFNI 128
+C Y H + PV+ I
Sbjct: 749 SCPYSHDFGSKVSAPVTSGI 768
>gi|157127959|ref|XP_001661247.1| butyrate response factor 1 (TIS11B protein) [Aedes aegypti]
gi|108882307|gb|EAT46532.1| AAEL002308-PA [Aedes aegypti]
Length = 355
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + + L + +C + G C +GP
Sbjct: 91 CRPFEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 142
Query: 316 TCRFDH 321
C F H
Sbjct: 143 RCHFVH 148
>gi|345561432|gb|EGX44521.1| hypothetical protein AOL_s00188g189 [Arthrobotrys oligospora ATCC
24927]
Length = 332
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 58/156 (37%), Gaps = 35/156 (22%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C ++L+ G CK G C + H +N+ +P C + +R G C+ G
Sbjct: 152 CKHWLR-GLCKKGDACDFLH----------EYNLRRMP------ECSFLIRYGYCQNGDD 194
Query: 155 CKFHHPQPSSLGTALP--LTGNASLGSMGSSVLPSSGL---QYAGIVPA---------PG 200
C + HP P + + P G LG + + +AG P P
Sbjct: 195 CLYFHPDPENRTSLCPHYENGFCPLGPTCAKKHVRKNICKFYFAGFCPDGRECREGAHPK 254
Query: 201 WNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQ 236
WNT +G + + G Y+ R+ D G +
Sbjct: 255 WNTDLGEL----TVKVEGERKRYNERDVTDDDMGVK 286
>gi|118376804|ref|XP_001021583.1| Zinc finger protein CTH1 [Tetrahymena thermophila]
gi|89303350|gb|EAS01338.1| Zinc finger protein CTH1 [Tetrahymena thermophila SB210]
Length = 279
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 1/62 (1%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C Y+ G C YG C++ H + Q R+ +P C + T TC YG CKY
Sbjct: 84 CRNYQIHGTCNYGKKCQYAHGRHELQQKPERKTNQYYKTRP-CKEFFNTLTCPYGQRCKY 142
Query: 113 HH 114
+H
Sbjct: 143 NH 144
>gi|242052467|ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
gi|241927354|gb|EES00499.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
Length = 164
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAP 199
C +++RTG+CK+G +C++ HP+P + AL G+ + S + + G P
Sbjct: 66 CHHFVRTGTCKYGDSCRYFHPKPDGVNPALAAPGSGPGPMVQQSDFIGNQPNFVGYQ-GP 124
Query: 200 GWNTYMGNI 208
N++ GNI
Sbjct: 125 DRNSFSGNI 133
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/22 (59%), Positives = 19/22 (86%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPK 116
C ++++TGTCKYG +C+Y HPK
Sbjct: 66 CHHFVRTGTCKYGDSCRYFHPK 87
>gi|213409996|ref|XP_002175768.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
gi|212003815|gb|EEB09475.1| zinc finger protein [Schizosaccharomyces japonicus yFS275]
Length = 495
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 33/75 (44%), Gaps = 26/75 (34%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL---------PSRPGQAICSNYS 306
C+ +M G C+YG+ C+F H GP+ L SRP C +YS
Sbjct: 433 CKNWMAYGRCRYGSKCQFAH-------------GPMELKTPVRHPKYKSRP----CRSYS 475
Query: 307 MYGICKFGPTCRFDH 321
+G C +G C F H
Sbjct: 476 QFGYCPYGQRCCFLH 490
>gi|328771087|gb|EGF81127.1| hypothetical protein BATDEDRAFT_10653 [Batrachochytrium
dendrobatidis JAM81]
Length = 624
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/134 (19%), Positives = 55/134 (41%), Gaps = 13/134 (9%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + C G++CK+ H + ++GP +C +++ G CKFG
Sbjct: 112 CNKFATGEQCNLGSNCKYSHDIQAYLAEKELDLGP----------VCPQFALLGECKFGI 161
Query: 316 TCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQ--NS 373
CRF + N ++ L+ D + N S I+ ++ ++Q ++
Sbjct: 162 KCRFSKAHTDAEGNQMVAEKKLN-EDQFIKNCSTKSIIQDIKQKNIDCTRSKEFIQWWSA 220
Query: 374 DAVSVQHQNPDMKN 387
+ + +Q + ++K
Sbjct: 221 EEIKLQQRLNELKK 234
>gi|146094028|ref|XP_001467125.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
gi|134071489|emb|CAM70178.1| hypothetical protein, unknown function [Leishmania infantum JPCM5]
Length = 338
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLP 294
C+ ++ TG C +GA C +HHP A AS++ P LP
Sbjct: 300 CKQFVQTGRCTFGARCLYHHPTAVAAAPNASHVVPQRLP 338
>gi|348508274|ref|XP_003441679.1| PREDICTED: hypothetical protein LOC100696516 [Oreochromis
niloticus]
Length = 393
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H E + L + +C + G C +G
Sbjct: 125 CRSFTENGLCKYGGKCQFAHGPEELRD--------LNRHPKYKTELCRTFHTIGFCPYGI 176
Query: 316 TCRFDH 321
C F H
Sbjct: 177 RCHFVH 182
>gi|256088194|ref|XP_002580237.1| hypothetical protein [Schistosoma mansoni]
gi|353228956|emb|CCD75127.1| hypothetical protein Smp_172780 [Schistosoma mansoni]
Length = 872
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 60/160 (37%), Gaps = 18/160 (11%)
Query: 244 SQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGL-------PSR 296
SQ P+ P P C YY G C+ G +C F HPK R A+ P G PS
Sbjct: 18 SQTDPQMPFPPVC-YYYQAGCCRNGNECTFTHPKVRCRTFASDGWCPYGYNCHFWHDPSV 76
Query: 297 PGQAI------CSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAI 350
+ C Y+ CK+G C F H N G++L H I
Sbjct: 77 KPNVVNLIKKPCLFYA-NNQCKYGDKCSFSHD-IDVQNNSGITLKEYRATKKVTGVHINI 134
Query: 351 SATHSIETSPDASSKIPNWVQNSDAVSVQHQNPDMKNSTT 390
A S T+ + S N + + SV N + S+T
Sbjct: 135 EALES--TTNEISHGKENGISEASLTSVMKSNLNKTLSST 172
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 46/133 (34%), Gaps = 32/133 (24%)
Query: 27 LKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREEL 86
L ++ N ++Q P P P C +Y+ G C G+ C F HP
Sbjct: 6 LLVNSNLSIAHISQTDP--QMPFPPVCYYYQ-AGCCRNGNECTFTHPKVR---------- 52
Query: 87 PERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRT 146
C + G C YG C + H P N++ P C +Y
Sbjct: 53 --------CRTFASDGWCPYGYNCHFWHDP---SVKPNVVNLIKKP-------CLFYA-N 93
Query: 147 GSCKFGVACKFHH 159
CK+G C F H
Sbjct: 94 NQCKYGDKCSFSH 106
>gi|254572800|ref|XP_002493509.1| Zinc-finger protein of unknown function [Komagataella pastoris
GS115]
gi|238033308|emb|CAY71330.1| Zinc-finger protein of unknown function [Komagataella pastoris
GS115]
gi|328354666|emb|CCA41063.1| Makorin-2 [Komagataella pastoris CBS 7435]
Length = 368
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 35/82 (42%), Gaps = 14/82 (17%)
Query: 33 QEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQ 92
Q G + SP C FYR+ G C GS+C F+H L + +
Sbjct: 104 QLSGSNSSKSPTSRNLSHVPCKFYRQ-GACQAGSSCPFSHT------------LTQTSQA 150
Query: 93 PDCGYYLKTGTCKYGSTCKYHH 114
C Y+ K GTCK+GS C H
Sbjct: 151 ATCKYFQK-GTCKFGSKCALVH 171
>gi|54038658|gb|AAH84221.1| Unknown (protein for MGC:80832) [Xenopus laevis]
Length = 335
Score = 40.0 bits (92), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 110 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 161
Query: 316 TCRFDH 321
C F H
Sbjct: 162 RCHFIH 167
>gi|147901333|ref|NP_001081886.1| zinc finger protein 36, C3H1 type-like 2-B [Xenopus laevis]
gi|4580024|gb|AAD24209.1|AF061982_1 CCCH zinc finger protein C3H-3 [Xenopus laevis]
Length = 364
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 139 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 190
Query: 316 TCRFDH 321
C F H
Sbjct: 191 RCHFIH 196
>gi|311250935|ref|XP_003124350.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Sus scrofa]
Length = 269
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I + GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDARFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|409051356|gb|EKM60832.1| hypothetical protein PHACADRAFT_247008 [Phanerochaete carnosa
HHB-10118-sp]
Length = 710
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKE--RIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKF 313
CR + G+C+YGA C+F H +E R+ Q + IC + + G C +
Sbjct: 407 CRSWEEKGSCRYGAKCQFAHGEEELRLVQRHP----------KYKTEICRTFWVSGSCPY 456
Query: 314 GPTCRFDH 321
G C F H
Sbjct: 457 GKRCCFIH 464
>gi|303277795|ref|XP_003058191.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460848|gb|EEH58142.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 216
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 246 NLPERPDQPDCRYYMNTGTCKYGADCKFHHP 276
+LP+RP+ C + TG C YG +C +HHP
Sbjct: 182 DLPQRPNAAHCIEFQKTGGCSYGKECPYHHP 212
>gi|170068665|ref|XP_001868953.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864657|gb|EDS28040.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 251
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + + L + +C + G C +GP
Sbjct: 12 CRPFEEAGECKYGDKCQFAHGMQELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 63
Query: 316 TCRFDH 321
C F H
Sbjct: 64 RCHFVH 69
>gi|119597069|gb|EAW76663.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_b [Homo sapiens]
Length = 255
Score = 40.0 bits (92), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|63054460|ref|NP_588409.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe 972h-]
gi|48474269|sp|O74463.2|YQC1_SCHPO RecName: Full=Uncharacterized protein C1739.01
gi|157310530|emb|CAA20774.2| zf-CCCH type zinc finger protein [Schizosaccharomyces pombe]
Length = 547
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 20/70 (28%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+++ N GTC G +C F H E RP IC Y + G CKFGP
Sbjct: 47 CKFFRN-GTCTAGENCPFSHSLET---------------ERP---IC-KYFLKGNCKFGP 86
Query: 316 TCRFDHPYAG 325
C H G
Sbjct: 87 KCALSHALPG 96
>gi|410988239|ref|XP_004000394.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Felis catus]
Length = 519
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 219 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 264
>gi|126334486|ref|XP_001363797.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Monodelphis domestica]
gi|395514828|ref|XP_003761614.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Sarcophilus harrisii]
Length = 269
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|82132888|sp|Q805B4.1|TISDB_XENLA RecName: Full=Zinc finger protein 36, C3H1 type-like 2-B; AltName:
Full=CCCH zinc finger protein 3-B; Short=XC3H-3b
gi|27544283|dbj|BAC54909.1| hypothetical protein [Xenopus laevis]
Length = 364
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 139 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 190
Query: 316 TCRFDH 321
C F H
Sbjct: 191 RCHFIH 196
>gi|339247875|ref|XP_003375571.1| conserved hypothetical protein [Trichinella spiralis]
gi|316971046|gb|EFV54885.1| conserved hypothetical protein [Trichinella spiralis]
Length = 198
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY++N C++G+ C F H + S N P C N +G CK+GP
Sbjct: 35 CRYFVNGPGCRFGSSCFFAHNLVELRPSMYRNFLYKTEP-------CRNLRTWGHCKYGP 87
Query: 316 TCRFDH 321
C + H
Sbjct: 88 RCLYLH 93
>gi|71406692|ref|XP_805864.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869435|gb|EAN84013.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 181
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
Query: 127 NILGLPMR----QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
++ LP++ ++ K+C + G+CKFG C +HH PS A P ASLG
Sbjct: 106 SVRSLPVKPCVERNRKTCKQFWENGACKFGSRCLYHHLAPSQGHLADPSVTKASLG 161
>gi|24641593|ref|NP_511141.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|442616128|ref|NP_001259490.1| Tis11 homolog, isoform C [Drosophila melanogaster]
gi|76803822|sp|P47980.2|TIS1_DROME RecName: Full=Protein TIS11; AltName: Full=dTIS11
gi|22832153|gb|AAF48194.2| Tis11 homolog, isoform A [Drosophila melanogaster]
gi|189182164|gb|ACD81858.1| LD36337p [Drosophila melanogaster]
gi|440216705|gb|AGB95332.1| Tis11 homolog, isoform C [Drosophila melanogaster]
Length = 436
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 217 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 267
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 97 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 152
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G C+F H + + C + G C +GP C F H
Sbjct: 153 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 198
>gi|388580037|gb|EIM20355.1| hypothetical protein WALSEDRAFT_33405 [Wallemia sebi CBS 633.66]
Length = 292
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 52/121 (42%), Gaps = 20/121 (16%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRP--GQAICSNYSMYGICKF 313
CR + GTC+YG C+F H ++ + +P P +C+ Y G C +
Sbjct: 101 CRSWEEKGTCRYGCKCQFAHGQDELRD----------VPRHPKFKTQLCATYWHSGSCPY 150
Query: 314 GPTCRFDHPYAGYPINYGLSLPPLSILDS----SLMNHQAISAT---HSIETSPDASSKI 366
G C F H + N PPL + + ++ Q+ + T HS+ +P+ S+
Sbjct: 151 GKRCCFIHSTFPHGANAN-GAPPLPLSEEEPTMTVSPRQSFTQTPTMHSLSLTPNTSTDS 209
Query: 367 P 367
P
Sbjct: 210 P 210
>gi|149755350|ref|XP_001494963.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Equus caballus]
gi|301777646|ref|XP_002924237.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Ailuropoda melanoleuca]
gi|348568558|ref|XP_003470065.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Cavia porcellus]
gi|410984387|ref|XP_003998510.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Felis catus]
gi|431908022|gb|ELK11629.1| Cleavage and polyadenylation specificity factor subunit 4 [Pteropus
alecto]
Length = 269
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|154303548|ref|XP_001552181.1| hypothetical protein BC1G_09345 [Botryotinia fuckeliana B05.10]
Length = 1161
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 15/88 (17%)
Query: 247 LPERPDQPD--CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
LP D P C Y+ + +C G DCK H +A N L + ++PG C
Sbjct: 484 LPASVDGPQWVCYYWYHDNSCTKGVDCKMAH--------SADN--DLRVAAKPGSVTC-R 532
Query: 305 YSMYGICKFGPTCRFDH--PYAGYPINY 330
Y + G C+ G C F H P+ G I+Y
Sbjct: 533 YWIQGHCRNGIDCFFAHESPHNGRSISY 560
>gi|6756059|ref|NP_035886.1| tristetraprolin [Mus musculus]
gi|135862|sp|P22893.1|TTP_MOUSE RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Growth
factor-inducible nuclear protein NUP475; AltName:
Full=Protein TIS11A; Short=TIS11; AltName:
Full=TPA-induced sequence 11; AltName: Full=Zinc finger
protein 36; Short=Zfp-36
gi|200100|gb|AAA39837.1| nuclear protein [Mus musculus]
gi|202169|gb|AAA72947.1| TIS11 primary response gene [Mus musculus]
gi|202206|gb|AAA40498.1| tristetraproline [Mus musculus]
gi|1020395|gb|AAC37676.1| tristetraprolin [Mus musculus]
gi|18204723|gb|AAH21391.1| Zinc finger protein 36 [Mus musculus]
gi|74191806|dbj|BAE32856.1| unnamed protein product [Mus musculus]
gi|148692194|gb|EDL24141.1| zinc finger protein 36 [Mus musculus]
Length = 319
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 101 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 152
Query: 316 TCRFDH 321
C F H
Sbjct: 153 RCHFIH 158
>gi|148356224|ref|NP_579824.2| tristetraprolin [Rattus norvegicus]
gi|149056466|gb|EDM07897.1| zinc finger protein 36 [Rattus norvegicus]
Length = 326
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 108 CRTYSESGRCRYGAKCQFAHGPGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 159
Query: 316 TCRFDH 321
C F H
Sbjct: 160 RCHFIH 165
>gi|1717819|sp|P47973.1|TTP_RAT RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Protein
TIS11A; Short=TIS11; AltName: Full=Zinc finger protein
36; Short=Zfp-36
gi|57759|emb|CAA44970.1| Tis 11 protein [Rattus rattus]
gi|9971206|dbj|BAB12432.1| TIS11 [Rattus norvegicus]
gi|37805235|gb|AAH60308.1| Zinc finger protein 36 [Rattus norvegicus]
Length = 320
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 102 CRTYSESGRCRYGAKCQFAHGPGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 153
Query: 316 TCRFDH 321
C F H
Sbjct: 154 RCHFIH 159
>gi|355729882|gb|AES10015.1| zinc finger CCCH-type containing 8 [Mustela putorius furo]
Length = 239
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 68/177 (38%), Gaps = 24/177 (13%)
Query: 6 QVKSNAVANQSADNIEEAIWRLKIHDNQEGGGVAQASPYPARP-GEPDCLFYRRTGLCGY 64
Q K A A QS EE++ + + D Q+ +P A+ G+ + +R G
Sbjct: 52 QAKEMANAAQSLPFPEESVKKEGVKDTQKAVKQNSKNPKAAQKNGKQKKMKRKRAGADQK 111
Query: 65 GSNCRFNHPAYAAQGAQYREELP--------------ERNGQPDCGYYLKTGTCKYGSTC 110
GSN + + Q + +E+ P ER G+ C Y+L+ C G C
Sbjct: 112 GSNASLQNRSSQEQDDKPKEKQPRVRMSQGFINQHTVERKGKQICKYFLER-KCIKGDQC 170
Query: 111 KYHHPKDRNGAGPV-SFNILGLPMR-------QDEKSCPYYMRTGSCKFGVACKFHH 159
K+ H + + F + G R +E C +Y C G CKF H
Sbjct: 171 KFDHDAEIEKKKEMCKFYVQGYCTRGENCLYLHNEYPCKFYHTGTKCYQGEYCKFSH 227
>gi|344289700|ref|XP_003416579.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Loxodonta africana]
Length = 269
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|312383024|gb|EFR28263.1| hypothetical protein AND_04029 [Anopheles darlingi]
Length = 572
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y G CKYG C+F H + L + +C + G C +GP
Sbjct: 281 CRPYEEAGECKYGDKCQFAHGMHELRN--------LQRHPKYKTELCRTFHSVGFCPYGP 332
Query: 316 TCRFDH 321
C F H
Sbjct: 333 RCHFVH 338
>gi|663198|emb|CAA57066.1| TIScc1 [Drosophila melanogaster]
gi|1093615|prf||2104281A cc1 gene
Length = 436
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 217 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 267
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 97 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 152
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G C+F H + + C + G C +GP C F H
Sbjct: 153 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 198
>gi|195352688|ref|XP_002042843.1| GM11580 [Drosophila sechellia]
gi|194126890|gb|EDW48933.1| GM11580 [Drosophila sechellia]
Length = 431
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 43/114 (37%), Gaps = 21/114 (18%)
Query: 217 AGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKY 267
A ++L+ + N G++ +H +Q+ P P QP CR + G CKY
Sbjct: 98 AVASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKY 153
Query: 268 GADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G C+F H + + C + G C +GP C F H
Sbjct: 154 GEKCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 199
>gi|432090579|gb|ELK23995.1| Zinc finger CCCH domain-containing protein 4 [Myotis davidii]
Length = 1258
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 39/104 (37%), Gaps = 26/104 (25%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G C +G +C F+H ELP++ C +Y+ TG C C Y H
Sbjct: 375 YFVEGRCTWGDHCNFSHDI----------ELPKKREL--CKFYI-TGFCAKAENCPYMH- 420
Query: 116 KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
L R+ + C Y TG+C G C F H
Sbjct: 421 ------------AFALICRERDFPCKLYHTTGNCINGDDCMFSH 452
>gi|301788732|ref|XP_002929785.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Ailuropoda
melanoleuca]
Length = 464
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 209
>gi|335284056|ref|XP_003354505.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Sus scrofa]
Length = 244
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 59/158 (37%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I + GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDARFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|297298126|ref|XP_002808510.1| PREDICTED: LOW QUALITY PROTEIN: butyrate response factor 1-like
[Macaca mulatta]
Length = 332
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 114 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 165
Query: 316 TCRFDH 321
C F H
Sbjct: 166 RCHFIH 171
>gi|254573282|ref|XP_002493750.1| Member of the CCCH zinc finger family [Komagataella pastoris GS115]
gi|238033549|emb|CAY71571.1| Member of the CCCH zinc finger family [Komagataella pastoris GS115]
gi|328354427|emb|CCA40824.1| Zinc finger CCCH domain-containing protein 7 [Komagataella pastoris
CBS 7435]
Length = 244
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G C YG C+F H + + PS C+N++ +G C++G
Sbjct: 184 CDQFNQKGHCPYGTKCQFAH--------GTHELKSVKRPSNWKTKPCANWTKFGKCRYGK 235
Query: 316 TCRFDH 321
C F H
Sbjct: 236 RCCFKH 241
>gi|358057390|dbj|GAA96739.1| hypothetical protein E5Q_03410 [Mixia osmundae IAM 14324]
Length = 924
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 16/84 (19%)
Query: 80 AQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKS 139
A Y+ EL C + + G C+YG+ C++ H G I+ R +
Sbjct: 641 ALYKTEL--------CRSWEEKGACRYGNRCQFAH-------GQKELRIVSRHPRYKTEC 685
Query: 140 CPYYMRTGSCKFGVACKF-HHPQP 162
C Y TG C +G C F HH P
Sbjct: 686 CRSYWVTGQCPYGKRCCFIHHSMP 709
>gi|354483439|ref|XP_003503900.1| PREDICTED: tristetraprolin-like [Cricetulus griseus]
Length = 374
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 157 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 208
Query: 316 TCRFDH 321
C F H
Sbjct: 209 RCHFIH 214
>gi|395852822|ref|XP_003798929.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Otolemur garnettii]
Length = 269
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|443898042|dbj|GAC75380.1| C3H1-type Zn-finger protein [Pseudozyma antarctica T-34]
Length = 609
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILG------------LPMRQDEKSCPY 142
C ++ KTG CK G +C Y H + P G P + C +
Sbjct: 306 CTFFNKTGQCKRGLSCPYRHDSSKIALCPKVLRAAGCTLPKGTCPLSHTPRAERVPHCVH 365
Query: 143 YMRTGSCKFGVACKFHH 159
Y+R+ C+ G AC + H
Sbjct: 366 YLRSRHCRNGTACLYTH 382
>gi|432115228|gb|ELK36738.1| Cleavage and polyadenylation specificity factor subunit 4 [Myotis
davidii]
Length = 269
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|366997863|ref|XP_003683668.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
gi|357521963|emb|CCE61234.1| hypothetical protein TPHA_0A01510 [Tetrapisispora phaffii CBS 4417]
Length = 294
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/119 (22%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 206 GNIGPLSPTSIAGSNLIYSSRN--QGDLGAGAQMHILSASSQNLPERPDQPD-CRYYMNT 262
N+ LS T++ ++ S + + + A ++ + S N+ ++ + + C +
Sbjct: 130 ANLQKLSSTNVTKNDENISHKKPIKIVITTAASVNAIDYSGTNINKQLFKTELCETFTTK 189
Query: 263 GTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G CKYG C+F H + +N ++P C N++ G C +G C F H
Sbjct: 190 GFCKYGNKCQFAHGLNELKLKQKTN----NFRTKP----CINWAKLGYCPYGKRCCFKH 240
>gi|194895813|ref|XP_001978349.1| GG17735 [Drosophila erecta]
gi|190649998|gb|EDV47276.1| GG17735 [Drosophila erecta]
Length = 457
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 21/112 (18%)
Query: 219 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 269
++L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 104 ASLVTITENLGNMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 159
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C+F H + + + + C + G C +GP C F H
Sbjct: 160 KCQFAH--------GSHELRNVHRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 203
>gi|393222216|gb|EJD07700.1| hypothetical protein FOMMEDRAFT_150244 [Fomitiporia mediterranea
MF3/22]
Length = 396
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 19/75 (25%)
Query: 247 LPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYS 306
+PER P C ++ N G CK GADC F H + +GP +C +++
Sbjct: 218 IPER--TPLCVHFANNGRCKNGADCLFPHVR----------VGPRS-------GVCRDFA 258
Query: 307 MYGICKFGPTCRFDH 321
+ G C G C H
Sbjct: 259 VLGYCDKGIDCEHQH 273
>gi|281340363|gb|EFB15947.1| hypothetical protein PANDA_020065 [Ailuropoda melanoleuca]
Length = 398
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 98 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 143
>gi|357144913|ref|XP_003573458.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
[Brachypodium distachyon]
Length = 362
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 23/135 (17%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQ-------------------SAASNIGPLGLPSR 296
C+ + C YG C F H ++ A+ +AA+N + PS
Sbjct: 181 CKKFYTEEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGSYNSPTAAANGPTILKPSN 240
Query: 297 PGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLS---ILDSSLMNHQAISAT 353
IC+ + M G C FG C F H A YG L + I + A+SA
Sbjct: 241 WKTRICNKWEMTGYCPFGSKCHFAHGAAEL-HKYGGGLVDVEGRDIASTPDSKQAALSAK 299
Query: 354 HSIETSPDASSKIPN 368
ET+P +++ P+
Sbjct: 300 APAETTPASTAAPPH 314
>gi|332867114|ref|XP_519234.3| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 7 [Pan troglodytes]
gi|397489494|ref|XP_003815761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Pan paniscus]
gi|410214168|gb|JAA04303.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249442|gb|JAA12688.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289414|gb|JAA23307.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353009|gb|JAA43108.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 269
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|327278691|ref|XP_003224094.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-like [Anolis
carolinensis]
Length = 480
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 176 CRPFEESGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 227
Query: 316 TCRFDH 321
C F H
Sbjct: 228 RCHFIH 233
>gi|5729939|ref|NP_006684.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Homo sapiens]
gi|402862924|ref|XP_003895788.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Papio anubis]
gi|426357076|ref|XP_004045874.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Gorilla gorilla gorilla]
gi|37999487|sp|O95639.1|CPSF4_HUMAN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit; AltName: Full=NS1 effector domain-binding
protein 1; Short=Neb-1; AltName: Full=No arches homolog
gi|4098572|gb|AAD00321.1| no arches [Homo sapiens]
gi|49457318|emb|CAG46958.1| CPSF4 [Homo sapiens]
gi|51094626|gb|EAL23878.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597073|gb|EAW76667.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|119597074|gb|EAW76668.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_f [Homo sapiens]
gi|124302214|gb|ABN05292.1| cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|261861580|dbj|BAI47312.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
gi|355560471|gb|EHH17157.1| hypothetical protein EGK_13489 [Macaca mulatta]
gi|355747522|gb|EHH52019.1| hypothetical protein EGM_12382 [Macaca fascicularis]
gi|380809012|gb|AFE76381.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|383413433|gb|AFH29930.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
gi|384940110|gb|AFI33660.1| cleavage and polyadenylation specificity factor subunit 4 isoform 1
[Macaca mulatta]
Length = 269
Score = 39.7 bits (91), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|395514830|ref|XP_003761615.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Sarcophilus harrisii]
Length = 244
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 58/159 (36%), Gaps = 16/159 (10%)
Query: 179 SMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQ 236
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 22 QLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQ 81
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIG 289
L P+C +Y G C +C F H P+ +I G
Sbjct: 82 CEFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
PL + IC NY + G C GP+C+F HP P+
Sbjct: 136 PLCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|347659013|ref|NP_001231630.1| zinc finger protein 36, C3H1 type-like 1 isoform 2 [Homo sapiens]
Length = 407
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 189 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 240
Query: 316 TCRFDH 321
C F H
Sbjct: 241 RCHFIH 246
>gi|291411295|ref|XP_002721911.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 2 [Oryctolagus cuniculus]
Length = 269
Score = 39.7 bits (91), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|45201139|ref|NP_986709.1| AGR044Cp [Ashbya gossypii ATCC 10895]
gi|44985922|gb|AAS54533.1| AGR044Cp [Ashbya gossypii ATCC 10895]
gi|374109960|gb|AEY98865.1| FAGR044Cp [Ashbya gossypii FDAG1]
Length = 300
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + TG CKY C+F H + S+ ++P C N+S G C++G
Sbjct: 191 CESFATTGACKYDNKCQFAHGLHELKFKERSD----KFRTKP----CINWSKTGYCRYGK 242
Query: 316 TCRFDH 321
C F H
Sbjct: 243 RCCFKH 248
Score = 38.5 bits (88), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C + TG C Y + C+F H + + ++E + +P C + KTG C+YG C +
Sbjct: 191 CESFATTGACKYDNKCQFAHGLHELK---FKERSDKFRTKP-CINWSKTGYCRYGKRCCF 246
Query: 113 HHPKD 117
H D
Sbjct: 247 KHGDD 251
>gi|449017519|dbj|BAM80921.1| similar to nuclear protein UKp68 [Cyanidioschyzon merolae strain
10D]
Length = 463
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 48/140 (34%)
Query: 36 GGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDC 95
G + AS P P C F+ C S C+F+HP EL C
Sbjct: 279 GSASTASDLP-----PRCQFWPN---CRNASACKFHHPT----------EL--------C 312
Query: 96 GYYLKTGTCKYGSTCKYHHPKDRNGAGP---VSFNILGLPM----------------RQD 136
+Y C+ G C++ HP R+G+ + +G+P+ R+
Sbjct: 313 RFY---PNCRSGDRCRFIHPTSRSGSSATLALMRKAMGMPLHHGIPIPCKYGFACERRRK 369
Query: 137 EKSCPYYMRTGSCKFGVACK 156
++SCPY +C++G C+
Sbjct: 370 DRSCPYAHPLLACRYGKDCR 389
>gi|345305259|ref|XP_001512096.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Ornithorhynchus anatinus]
Length = 243
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 39/91 (42%), Gaps = 10/91 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 306
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 69 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 126
Query: 307 MYGICKFGPTCRFDHPYAGYPINYGLSLPPL 337
+ G C GP+C+F HP P+ PPL
Sbjct: 127 LVGFCPEGPSCKFMHPRFELPMGTA-EQPPL 156
>gi|169843403|ref|XP_001828431.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
gi|116510528|gb|EAU93423.1| hypothetical protein CC1G_04402 [Coprinopsis cinerea okayama7#130]
Length = 738
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+C+YG+ C+F H +E + + + + IC + + G C +G
Sbjct: 411 CRSWEEKGSCRYGSKCQFAHGEEELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 462
Query: 316 TCRFDH 321
C F H
Sbjct: 463 RCCFIH 468
>gi|397507282|ref|XP_003824130.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1 [Pan
paniscus]
Length = 407
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 189 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 240
Query: 316 TCRFDH 321
C F H
Sbjct: 241 RCHFIH 246
>gi|355731037|gb|AES10395.1| zinc finger , RNA-binding motif and serine/arginine rich 2 [Mustela
putorius furo]
Length = 463
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H PSS T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPSSSPTLLIKSMFTTFG 209
>gi|332867112|ref|XP_001137776.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 6 [Pan troglodytes]
gi|397489492|ref|XP_003815760.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Pan paniscus]
gi|410214166|gb|JAA04302.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410249440|gb|JAA12687.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410289412|gb|JAA23306.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
gi|410353007|gb|JAA43107.1| cleavage and polyadenylation specific factor 4, 30kDa [Pan
troglodytes]
Length = 244
Score = 39.7 bits (91), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|73957938|ref|XP_860761.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 3 [Canis lupus familiaris]
Length = 244
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|73957940|ref|XP_850149.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Canis lupus familiaris]
Length = 269
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|350581420|ref|XP_003481031.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Sus scrofa]
Length = 422
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 306
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 247 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 304
Query: 307 MYGICKFGPTCRFDHPYAGYPI 328
+ G C GP+C+F HP P+
Sbjct: 305 LVGFCPEGPSCKFMHPRFELPM 326
>gi|291411293|ref|XP_002721910.1| PREDICTED: cleavage and polyadenylation specific factor 4, 30kDa
isoform 1 [Oryctolagus cuniculus]
Length = 244
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|281349381|gb|EFB24965.1| hypothetical protein PANDA_005238 [Ailuropoda melanoleuca]
Length = 320
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 102 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 153
Query: 316 TCRFDH 321
C F H
Sbjct: 154 RCHFIH 159
>gi|297742083|emb|CBI33870.3| unnamed protein product [Vitis vinifera]
Length = 285
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 16/78 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAA------------SNIGPLGLPSRPGQAICS 303
C+ + C YG +C F H ++ A+ + SNI P +R IC+
Sbjct: 161 CKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPGAGGGGSNIKPSNWKTR----ICN 216
Query: 304 NYSMYGICKFGPTCRFDH 321
+ + G C FG C F H
Sbjct: 217 KWELTGYCPFGSKCHFAH 234
>gi|449502445|ref|XP_004174509.1| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 36, C3H1
type-like 2-like [Taeniopygia guttata]
Length = 384
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 167 CRPFEENGACKYGEKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 218
Query: 316 TCRFDH 321
C F H
Sbjct: 219 RCHFIH 224
>gi|344236941|gb|EGV93044.1| Tristetraproline [Cricetulus griseus]
Length = 315
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 98 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 149
Query: 316 TCRFDH 321
C F H
Sbjct: 150 RCHFIH 155
>gi|449476092|ref|XP_002192710.2| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Taeniopygia guttata]
Length = 243
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 57/159 (35%), Gaps = 16/159 (10%)
Query: 179 SMGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQ 236
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 22 QLGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQ 81
Query: 237 MHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIG 289
L P+C +Y G C +C F H P+ +I G
Sbjct: 82 CEFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHG 135
Query: 290 PLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
PL + IC NY + G C GP C+F HP P+
Sbjct: 136 PLCRHRHTRRVICVNY-LVGFCPEGPACKFMHPRFELPM 173
>gi|189203027|ref|XP_001937849.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984948|gb|EDU50436.1| mRNA 3'-end-processing protein yth1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 275
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH--PKD 117
GLC G C F H + P+C YY +T TC G C Y H P+
Sbjct: 103 GLCKKGETCEFLHEYNLRR-------------MPECSYYARTQTCSNGDDCLYLHIDPEA 149
Query: 118 RNGAGP---VSFNILG----LPMRQDEKSCPYYMRTGSCKFGVACKF-HHPQ-PSSL 165
+ + P F LG L + +K CP+Y+ G C G CK+ HP+ P+ L
Sbjct: 150 KRPSCPHYDRGFCPLGPHCSLKHNKKDKLCPFYL-CGFCPEGKGCKYGAHPRYPTDL 205
>gi|12836625|dbj|BAB23739.1| unnamed protein product [Mus musculus]
Length = 307
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 89 CRTYSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 140
Query: 316 TCRFDH 321
C F H
Sbjct: 141 RCHFIH 146
>gi|449444220|ref|XP_004139873.1| PREDICTED: uncharacterized protein LOC101206853 [Cucumis sativus]
Length = 2118
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 45/114 (39%), Gaps = 24/114 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC S C+ H +PER PDC Y+L+ G C C Y H + N
Sbjct: 1917 GLCSNAS-CKLTHKV-----------IPER--MPDCSYFLQ-GLCS-SKNCAYRHV-NVN 1959
Query: 120 GAGPV------SFNILGLPMRQDEK-SCPYYMRTGSCKFGVACKFHHPQPSSLG 166
P + LG R+ CP TG+C CK HHP+ + G
Sbjct: 1960 SKVPTCEAFLRGYCALGNECRKKHSYVCPLLEATGTCPDRSTCKLHHPKRQTKG 2013
>gi|430812672|emb|CCJ29916.1| unnamed protein product [Pneumocystis jirovecii]
Length = 383
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 43/97 (44%), Gaps = 13/97 (13%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + ++G C+YG C++ H G L + C +M +GSC +G
Sbjct: 244 CKNWEESGECRYGLKCQFAH-------GHSELRTLLRHPKYKTSPCKTFMESGSCPYGQR 296
Query: 155 CKFHHP----QPSSLGTALPLTGNASLGSMGSSVLPS 187
C F H +P + +LPL ++ S GS+ PS
Sbjct: 297 CCFSHTKEQIKPKKISVSLPLKN--TVPSQGSTFPPS 331
>gi|62204272|gb|AAH92716.1| Cth1 protein, partial [Danio rerio]
Length = 257
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 44/112 (39%), Gaps = 23/112 (20%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAY----AAQGAQYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y TG C Y C+F H + ++ +Y+ EL C Y G C YG+
Sbjct: 103 CSRYAETGTCKYAERCQFAHGLHDLHVPSRHPKYKTEL--------CRTYHTAGYCVYGT 154
Query: 109 TCKY-HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
C + H+ K++ P N+ C + G C FG C F H
Sbjct: 155 RCLFVHNLKEQRPIRPRRRNV----------PCRTFRAFGVCPFGNRCHFLH 196
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 29/69 (42%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
C Y TGTCKY C+F H + L +PSR + +C Y G C
Sbjct: 103 CSRYAETGTCKYAERCQFAH-----------GLHDLHVPSRHPKYKTELCRTYHTAGYCV 151
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 152 YGTRCLFVH 160
>gi|27806837|ref|NP_776367.1| cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
gi|75057446|sp|O19137.1|CPSF4_BOVIN RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|2327052|gb|AAC48759.1| cleavage and polyadenylation specificity factor 30 kDa subunit [Bos
taurus]
gi|296472897|tpg|DAA15012.1| TPA: cleavage and polyadenylation specificity factor subunit 4 [Bos
taurus]
Length = 243
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|327288843|ref|XP_003229134.1| PREDICTED: tRNA-dihydrouridine synthase 3-like [Anolis
carolinensis]
Length = 624
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 10/61 (16%)
Query: 265 CKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYA 324
C +GA C + H E+ + +IG C +S++G C+FG TCRF +
Sbjct: 83 CLFGAMCPWQHDLEKYIATKLPDIGD----------CCILFSLFGKCRFGITCRFGGAHL 132
Query: 325 G 325
G
Sbjct: 133 G 133
>gi|253743945|gb|EET00219.1| Zinc finger domain-containing protein [Giardia intestinalis ATCC
50581]
Length = 192
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G C YG C+F H E SN+ + L C+++ G C +G
Sbjct: 36 CNCFAEFGRCDYGDRCQFAHSMEEFQHRRRSNVKDMKL--------CTDFITQGYCPYGR 87
Query: 316 TCRFDH 321
C F H
Sbjct: 88 RCNFLH 93
>gi|355729867|gb|AES10010.1| zinc finger CCCH-type containing 3 [Mustela putorius furo]
Length = 858
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 74/188 (39%), Gaps = 34/188 (18%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNG------------QPDCGYY 98
C++Y R G C +G C + H P A ++ R + +G P C Y+
Sbjct: 645 CMYYNRFGRCHHGQRCPYIHDPDKVAVCTRFLRGTCKKTDGTCPFSHHVSKEKMPVCSYF 704
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PM-----RQDEKSCPYYMRTGSCKFG 152
LK G C S C Y H A + + G P+ ++ CP + R G C G
Sbjct: 705 LK-GICS-NSNCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGLCPRG 762
Query: 153 VACKFHHPQPSSLG---TALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIG 209
C+ H LG T P G+A S SS S G + A PG T
Sbjct: 763 AQCQLLHRSQKRLGRRPTPTPEPGSAPPRSKASS---SHGPRKASAAQRPGRQT------ 813
Query: 210 PLSPTSIA 217
P SPTS+A
Sbjct: 814 PSSPTSVA 821
>gi|59891425|ref|NP_001012351.1| cleavage and polyadenylation specificity factor subunit 4 [Rattus
norvegicus]
gi|81882852|sp|Q5FVR7.1|CPSF4_RAT RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4; AltName: Full=Cleavage and polyadenylation
specificity factor 30 kDa subunit; Short=CPSF 30 kDa
subunit
gi|58476448|gb|AAH89824.1| Cleavage and polyadenylation specific factor 4 [Rattus norvegicus]
gi|183229546|gb|ACC60271.1| cleavage and polyadenylation specific factor 4 isoform 1 [Mus
musculus]
Length = 243
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|125987603|ref|NP_001075028.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Homo sapiens]
gi|383872422|ref|NP_001244547.1| cleavage and polyadenylation specificity factor subunit 4 [Macaca
mulatta]
gi|332258048|ref|XP_003278115.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 [Nomascus leucogenys]
gi|402862922|ref|XP_003895787.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Papio anubis]
gi|403285963|ref|XP_003934278.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Saimiri boliviensis boliviensis]
gi|426357074|ref|XP_004045873.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Gorilla gorilla gorilla]
gi|13111867|gb|AAH03101.1| Cleavage and polyadenylation specific factor 4, 30kDa [Homo
sapiens]
gi|119597070|gb|EAW76664.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_c [Homo sapiens]
gi|380809014|gb|AFE76382.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|383413435|gb|AFH29931.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
gi|384940112|gb|AFI33661.1| cleavage and polyadenylation specificity factor subunit 4 isoform 2
[Macaca mulatta]
Length = 244
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|73963334|ref|XP_853070.1| PREDICTED: zinc finger protein 36, C3H type-like 1 isoform 3 [Canis
lupus familiaris]
Length = 338
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|410048467|ref|XP_003314464.2| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Pan
troglodytes]
Length = 391
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 173 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 224
Query: 316 TCRFDH 321
C F H
Sbjct: 225 RCHFIH 230
>gi|145507218|ref|XP_001439564.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406759|emb|CAK72167.1| unnamed protein product [Paramecium tetraurelia]
Length = 200
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%), Gaps = 6/60 (10%)
Query: 245 QNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSN 304
QN RP C+ +MN G C YG+ C++ HP+ I + + + + Q ICSN
Sbjct: 95 QNYKTRP----CKNFMNDGWCNYGSRCQYIHPENSIIKKKTHKL--ISQDKQAQQKICSN 148
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 43/95 (45%), Gaps = 16/95 (16%)
Query: 76 AAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLP--- 132
+ + ++ EE ++ C + G+CK+G C Y H G + LP
Sbjct: 44 SVEKYKFIEEYTKKKKTELCKNFTLKGSCKFGKECSYAH-----GCSEL------LPKAH 92
Query: 133 MRQDEKS--CPYYMRTGSCKFGVACKFHHPQPSSL 165
+ Q+ K+ C +M G C +G C++ HP+ S +
Sbjct: 93 LHQNYKTRPCKNFMNDGWCNYGSRCQYIHPENSII 127
>gi|29792109|gb|AAH50738.1| CPSF4 protein [Homo sapiens]
gi|119597071|gb|EAW76665.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_d [Homo sapiens]
gi|312153176|gb|ADQ33100.1| cleavage and polyadenylation specific factor 4, 30kDa [synthetic
construct]
Length = 243
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|392571357|gb|EIW64529.1| hypothetical protein TRAVEDRAFT_139454 [Trametes versicolor
FP-101664 SS1]
Length = 761
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+C+YGA C+F H ++ + + + + IC + + G C +G
Sbjct: 452 CRSWEEKGSCRYGAKCQFAHGEDELRK--------VQRHPKYKTEICRTFWVSGSCPYGK 503
Query: 316 TCRFDH 321
C F H
Sbjct: 504 RCCFIH 509
>gi|417397723|gb|JAA45895.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 243
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|357158149|ref|XP_003578032.1| PREDICTED: zinc finger CCCH domain-containing protein 59-like
[Brachypodium distachyon]
Length = 608
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 38/105 (36%), Gaps = 20/105 (19%)
Query: 17 ADNIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
A+N + WR + ++G G C Y +G C GS C F H
Sbjct: 293 AENTDLQYWRYDVKRQRQG----------QTNGSLLCFKYTSSGSCPRGSKCNFRHD--- 339
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGA 121
EE E + C +L G C+ G C+Y H GA
Sbjct: 340 -------EEAREHCQRNVCFDFLNKGKCEKGPECRYAHSLSEEGA 377
>gi|344289702|ref|XP_003416580.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Loxodonta africana]
Length = 244
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|395852820|ref|XP_003798928.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 1 [Otolemur garnettii]
Length = 244
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|2687591|gb|AAC53567.1| clipper/cleavage and polyadenylation specificity factor 30 kDa
subunit homolog [Mus musculus]
Length = 208
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSRN-QGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 10 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 69
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 70 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 123
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 124 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 160
>gi|291406477|ref|XP_002719590.1| PREDICTED: butyrate response factor 1 [Oryctolagus cuniculus]
Length = 338
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|149755352|ref|XP_001494983.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Equus caballus]
gi|301777648|ref|XP_002924238.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 2 [Ailuropoda melanoleuca]
gi|348568556|ref|XP_003470064.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Cavia porcellus]
gi|354495217|ref|XP_003509727.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like [Cricetulus griseus]
gi|410984389|ref|XP_003998511.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4 isoform 2 [Felis catus]
gi|183229548|gb|ACC60272.1| cleavage and polyadenylation specific factor 4 isoform 2 [Mus
musculus]
Length = 244
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 173
>gi|395504153|ref|XP_003756421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sarcophilus
harrisii]
Length = 338
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 121 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 172
Query: 316 TCRFDH 321
C F H
Sbjct: 173 RCHFIH 178
>gi|296215346|ref|XP_002754086.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Callithrix
jacchus]
Length = 338
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|392570407|gb|EIW63580.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 2341
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 32/79 (40%), Gaps = 8/79 (10%)
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHH-------PKDRNGAGPVS-FNILGLPMRQDEKSC 140
RN +P C +Y K G CK GS+C + H P + GP F C
Sbjct: 5 RNHRPPCRFYSKPGGCKNGSSCTFAHIDGASPSPPGQFQGGPRQPFVPRPPVPNAPPGVC 64
Query: 141 PYYMRTGSCKFGVACKFHH 159
+Y G C G C+F H
Sbjct: 65 KFYYDRGFCSRGSDCRFRH 83
>gi|145524992|ref|XP_001448318.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124415862|emb|CAK80921.1| unnamed protein product [Paramecium tetraurelia]
Length = 212
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 37/89 (41%), Gaps = 8/89 (8%)
Query: 233 AGAQMHILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
++ I + P + + CR Y G CKYG C F H A++ ++
Sbjct: 33 VQRKLRIKKCYQEEEPLKKKKDLCRNYQMNGCCKYGDQCFFIHTP---AKTESTLYSSTS 89
Query: 293 LPSRPGQAICSNYSMYGICKFGPTCRFDH 321
++P C Y G C FGP C+F H
Sbjct: 90 TKTKP----CKRY-FSGFCGFGPKCQFLH 113
>gi|54695804|gb|AAV38274.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|61366592|gb|AAX42880.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|344273937|ref|XP_003408775.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Loxodonta
africana]
Length = 338
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|242065404|ref|XP_002453991.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
gi|241933822|gb|EES06967.1| hypothetical protein SORBIDRAFT_04g022813 [Sorghum bicolor]
Length = 263
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
QD+ CP++++TG+C+FGV C H P T L
Sbjct: 210 QDKAHCPFHLKTGACRFGVRCSRVHFYPDKSSTLL 244
>gi|241674813|ref|XP_002400152.1| makorin, putative [Ixodes scapularis]
gi|215504190|gb|EEC13684.1| makorin, putative [Ixodes scapularis]
Length = 411
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 32/67 (47%), Gaps = 18/67 (26%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPD--CGYYLKTGTCKYGSTCKYH 113
Y +G+C G C F+H A G PD C YYLK G C YGS C+Y
Sbjct: 10 YFLSGMCRDGQRCHFSHDRAA--------------GAPDNVCRYYLK-GECMYGSRCRYD 54
Query: 114 HPK-DRN 119
H + DRN
Sbjct: 55 HVRTDRN 61
>gi|149737318|ref|XP_001500199.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Equus
caballus]
Length = 338
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|147903417|ref|NP_001079662.1| tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like [Xenopus laevis]
gi|82176436|sp|Q7ZWS1.1|DUS3L_XENLA RecName: Full=tRNA-dihydrouridine(47) synthase [NAD(P)(+)]-like;
AltName: Full=tRNA-dihydrouridine synthase 3-like
gi|28436916|gb|AAH46730.1| MGC53781 protein [Xenopus laevis]
Length = 640
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 6/51 (11%)
Query: 62 CGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C +G C+F+H A+Y + PE + +P+C Y G C YG TC++
Sbjct: 140 CFFGDKCKFSHDV-----AKYVSQKPE-DIRPNCHLYETFGKCIYGVTCRF 184
>gi|155372187|ref|NP_001094704.1| zinc finger protein 36, C3H1 type-like 1 [Bos taurus]
gi|154425731|gb|AAI51441.1| ZFP36L1 protein [Bos taurus]
gi|296482999|tpg|DAA25114.1| TPA: butyrate response factor 1 [Bos taurus]
gi|440897352|gb|ELR49063.1| Zinc finger protein 36, C3H1 type-like 1 [Bos grunniens mutus]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|410962515|ref|XP_003987814.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Felis catus]
gi|410962517|ref|XP_003987815.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Felis catus]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|403355299|gb|EJY77222.1| Tristetraproline, zinc finger protein [Oxytricha trifallax]
Length = 343
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + N G+C +G C F H +++ + LPS+ +C Y C +G
Sbjct: 42 CKNWENQGSCIFGDQCSFAHGLQQLH-------TKIDLPSKYKTRLCKKYQEELYCPYGV 94
Query: 316 TCRFDH 321
C+F H
Sbjct: 95 RCQFIH 100
>gi|351714712|gb|EHB17631.1| Butyrate response factor 1 [Heterocephalus glaber]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|195132534|ref|XP_002010698.1| GI21684 [Drosophila mojavensis]
gi|193907486|gb|EDW06353.1| GI21684 [Drosophila mojavensis]
Length = 411
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 34/94 (36%), Gaps = 17/94 (18%)
Query: 237 MHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGADCKFHHPKERIAQSAASN 287
+H +Q+ P P QP CR Y G CKYG C+F H
Sbjct: 133 LHRKLERTQSEPLPPQQPMNTSRYKTELCRPYEEAGECKYGEKCQFAH--------GCHE 184
Query: 288 IGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
+ L + C + G C +GP C F H
Sbjct: 185 LRNLQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 218
>gi|532796|gb|AAA62666.1| DTIS11 protein [Drosophila melanogaster]
Length = 437
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 27/112 (24%), Positives = 42/112 (37%), Gaps = 21/112 (18%)
Query: 219 SNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGA 269
++L+ + N G++ +H +Q+ P P QP CR + G CKYG
Sbjct: 100 ASLVTITENLGNM----NLHRKLERTQSEPLPPQQPMNTSRYKTELCRPFEEAGECKYGE 155
Query: 270 DCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C+F H + + C + G C +GP C F H
Sbjct: 156 KCQFAHGSHELRNVHRH--------PKYKTEYCRTFHSVGFCPYGPRCHFVH 199
>gi|402876515|ref|XP_003902009.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Papio anubis]
gi|403264495|ref|XP_003924515.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Saimiri
boliviensis boliviensis]
gi|355693383|gb|EHH27986.1| hypothetical protein EGK_18316 [Macaca mulatta]
gi|380815918|gb|AFE79833.1| zinc finger protein 36, C3H1 type-like 1 [Macaca mulatta]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|348573284|ref|XP_003472421.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1-like [Cavia
porcellus]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|301763295|ref|XP_002917068.1| PREDICTED: butyrate response factor 1-like [Ailuropoda melanoleuca]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|149590799|ref|XP_001521042.1| PREDICTED: zinc finger protein 36, C3H1 type-like 2-B-like
[Ornithorhynchus anatinus]
Length = 345
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G CKYG C+F H + L + +C + G C +GP
Sbjct: 133 CRPFEESGACKYGDKCQFAH--------GFHELRSLTRHPKYKTELCRTFHTIGFCPYGP 184
Query: 316 TCRFDH 321
C F H
Sbjct: 185 RCHFIH 190
>gi|126340761|ref|XP_001368017.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Monodelphis
domestica]
Length = 478
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G+NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 59 YFMHGVCKEGNNCRYSHDLSTSQSAMV------------CRYYQR-GCCAYGDRCRYEHT 105
Query: 116 KDRNGAGPVSFNILGLP 132
K + N+ P
Sbjct: 106 KPLKREEVTAANLAAKP 122
Score = 38.1 bits (87), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 36/170 (21%), Positives = 62/170 (36%), Gaps = 46/170 (27%)
Query: 253 QPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICK 312
Q CRY+M+ G CK G +C++ H L + +C Y G C
Sbjct: 54 QVTCRYFMH-GVCKEGNNCRYSH----------------DLSTSQSAMVCRYYQR-GCCA 95
Query: 313 FGPTCRFDHPYAGYPINYGLSLPPLSILDSSLMNHQAISATHSIETSPDASSKIPNWVQN 372
+G CR++H L + +A + + P ASS +P V+
Sbjct: 96 YGDRCRYEHT-------------------KPLKREEVTAANLAAKPDPPASSSLPTLVET 136
Query: 373 SDAVSV---QHQNPDMKNSTTKNSDDSSKVDHPP------HSVPNCSEPP 413
S + +N + + D + ++ P + P+C+E P
Sbjct: 137 LAEASTGEAETENSNFAAAGAGGEDWVNAIEFVPGQPYCGRAAPSCTEAP 186
>gi|90075092|dbj|BAE87226.1| unnamed protein product [Macaca fascicularis]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|431904505|gb|ELK09888.1| Butyrate response factor 1 [Pteropus alecto]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|417399200|gb|JAA46628.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|407416712|gb|EKF37774.1| hypothetical protein MOQ_002026 [Trypanosoma cruzi marinkellei]
Length = 279
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%)
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
+G G V + L + ++ K+C + G+CKFG C +HH PS A P AS+G
Sbjct: 105 SGDGSVGSLPVRLCVERNRKACRQFWENGACKFGSRCLYHHSAPSRGHFAAPSVTKASVG 164
>gi|335292719|ref|XP_003356787.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Sus scrofa]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|148231564|ref|NP_001086337.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
laevis]
gi|82183649|sp|Q6DJP7.1|CPSF4_XENLA RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|49522087|gb|AAH75128.1| MGC81862 protein [Xenopus laevis]
Length = 269
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 42/167 (25%), Positives = 60/167 (35%), Gaps = 17/167 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKSACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPL 337
L + IC NY + G C GP C+F HP P+ PPL
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCIEGPNCKFMHPRFELPMGTA-EQPPL 181
>gi|8392999|ref|NP_058868.1| zinc finger protein 36, C3H1 type-like 1 [Rattus norvegicus]
gi|135864|sp|P17431.1|TISB_RAT RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-inducible protein CMG1; AltName: Full=Protein
TIS11B
gi|55961|emb|CAA36826.1| unnamed protein product [Rattus norvegicus]
Length = 338
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|197097548|ref|NP_001124577.1| zinc finger protein 36, C3H1 type-like 1 [Pongo abelii]
gi|55725015|emb|CAH89375.1| hypothetical protein [Pongo abelii]
Length = 316
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 98 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 149
Query: 316 TCRFDH 321
C F H
Sbjct: 150 RCHFIH 155
>gi|395533099|ref|XP_003768601.1| PREDICTED: putative cleavage and polyadenylation specificity factor
subunit 4-like protein [Sarcophilus harrisii]
Length = 170
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 56/145 (38%), Gaps = 34/145 (23%)
Query: 31 DNQEGGGVAQASPYPA--RPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPE 88
+NQ G G P+P + G C F+ + GLC G C F H +
Sbjct: 20 ENQRGIGFL---PFPGMDKSGVAVCTFFLK-GLCEKGKLCPFRHD--------------D 61
Query: 89 RNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSF--------NILGLPMRQDEKS- 139
C ++L+ G CK CK+ H D F N L + D S
Sbjct: 62 GEKTVVCKHWLR-GLCKKSDCCKFLHQYDVTKMPECYFYSKFGECSNKECLFLHTDSASK 120
Query: 140 ---CPYYMRTGSCKFGVACKFHHPQ 161
CP+Y G CK+G CKFHH +
Sbjct: 121 IRDCPWY-DQGFCKYGPLCKFHHVR 144
>gi|356528629|ref|XP_003532902.1| PREDICTED: zinc finger CCCH domain-containing protein 5-like
[Glycine max]
Length = 587
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 124 VSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
V+ I QD+ CP++++TG+C+FG+ C H P T L
Sbjct: 160 VAQQIPNFGTEQDKAHCPFHLKTGACRFGIRCSRVHFYPDKSSTLL 205
>gi|27696591|gb|AAH43311.1| Zinc finger CCCH type containing 6 [Mus musculus]
Length = 936
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 34/104 (32%), Gaps = 34/104 (32%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G C G +C+FNH A + + C YYL+ G C G C Y H
Sbjct: 37 YFLEGRCIKGDHCKFNHDAELEKKKEV------------CKYYLQ-GYCTKGENCIYMH- 82
Query: 116 KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
E C +Y C G CKF H
Sbjct: 83 --------------------SEFPCKFYHSGAKCYQGDKCKFSH 106
>gi|6680808|ref|NP_031590.1| zinc finger protein 36, C3H1 type-like 1 [Mus musculus]
gi|135863|sp|P23950.1|TISB_MOUSE RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName: Full=Protein
TIS11B
gi|202065|gb|AAA72948.1| TIS11 primary response gene [Mus musculus]
gi|26331836|dbj|BAC29648.1| unnamed protein product [Mus musculus]
gi|26341688|dbj|BAC34506.1| unnamed protein product [Mus musculus]
gi|148670707|gb|EDL02654.1| zinc finger protein 36, C3H type-like 1 [Mus musculus]
Length = 338
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|256088628|ref|XP_002580430.1| zinc finger protein [Schistosoma mansoni]
gi|350644405|emb|CCD60847.1| zinc finger protein, putative [Schistosoma mansoni]
Length = 353
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
Query: 40 QASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYL 99
Q + Y AR CL Y++ C G NC F H + Q+ + R C Y
Sbjct: 220 QDAIYNARYKTQPCLHYQKYKHCPLGDNCHFAHGPNELKYPQFHPKYRTR----ICMNYA 275
Query: 100 KTGTCKYGSTCKYHH 114
GTC YG+ C + H
Sbjct: 276 NNGTCPYGNNCYFLH 290
>gi|452001978|gb|EMD94437.1| hypothetical protein COCHEDRAFT_1222928 [Cochliobolus
heterostrophus C5]
Length = 255
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 25/117 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH--PKD 117
GLC G C F H + P+C YY +T TC G C Y H P
Sbjct: 83 GLCKKGETCEFLHEYNLRR-------------MPECSYYARTQTCSNGDDCLYLHLDPDA 129
Query: 118 RNGAGP---VSFNILG----LPMRQDEKSCPYYMRTGSCKFGVACKF-HHPQ-PSSL 165
+ + P F LG L + +K CP+Y+ G C G CK+ HP+ P+ L
Sbjct: 130 KRASCPHYDRGFCPLGPHCALKHNKKDKLCPFYL-CGFCPEGKGCKYGAHPRYPTDL 185
>gi|207080074|ref|NP_001128956.1| DKFZP469G0620 protein [Pongo abelii]
gi|55732554|emb|CAH92977.1| hypothetical protein [Pongo abelii]
Length = 338
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|417398298|gb|JAA46182.1| Putative polyadenylation factor i complex subunit yth1 cpsf subunit
[Desmodus rotundus]
Length = 279
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 306
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 307 MYGICKFGPTCRFDHPYAGYPI 328
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|395849618|ref|XP_003797418.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Otolemur garnettii]
gi|395849620|ref|XP_003797419.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2
[Otolemur garnettii]
gi|395849622|ref|XP_003797420.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 3
[Otolemur garnettii]
Length = 338
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|354472162|ref|XP_003498309.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Cricetulus
griseus]
gi|344235754|gb|EGV91857.1| Butyrate response factor 1 [Cricetulus griseus]
Length = 338
Score = 39.3 bits (90), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|61370292|gb|AAX43470.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
Length = 339
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|194377356|dbj|BAG57626.1| unnamed protein product [Homo sapiens]
Length = 316
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|119597068|gb|EAW76662.1| cleavage and polyadenylation specific factor 4, 30kDa, isoform
CRA_a [Homo sapiens]
Length = 216
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGPLGLPSRPGQAICSNYS 306
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 41 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 98
Query: 307 MYGICKFGPTCRFDHPYAGYPI 328
+ G C GP+C+F HP P+
Sbjct: 99 LVGFCPEGPSCKFMHPRFELPM 120
>gi|15812180|ref|NP_004917.2| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|347659004|ref|NP_001231627.1| zinc finger protein 36, C3H1 type-like 1 isoform 1 [Homo sapiens]
gi|1351254|sp|Q07352.1|TISB_HUMAN RecName: Full=Zinc finger protein 36, C3H1 type-like 1; AltName:
Full=Butyrate response factor 1; AltName:
Full=EGF-response factor 1; Short=ERF-1; AltName:
Full=Protein TIS11B
gi|825653|emb|CAA55670.1| ERF-1 [Homo sapiens]
gi|17390794|gb|AAH18340.1| Zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|54695806|gb|AAV38275.1| zinc finger protein 36, C3H type-like 1 [Homo sapiens]
gi|61356812|gb|AAX41289.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|61360527|gb|AAX41874.1| zinc finger protein 36 C3H type-like 1 [synthetic construct]
gi|119601373|gb|EAW80967.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|119601374|gb|EAW80968.1| zinc finger protein 36, C3H type-like 1, isoform CRA_a [Homo
sapiens]
gi|123980892|gb|ABM82275.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|123995707|gb|ABM85455.1| zinc finger protein 36, C3H type-like 1 [synthetic construct]
gi|168277788|dbj|BAG10872.1| butyrate response factor 1 [synthetic construct]
Length = 338
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|413947046|gb|AFW79695.1| hypothetical protein ZEAMMB73_397300 [Zea mays]
Length = 166
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 140 CPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNAS 176
C +++RTG+CK+G +C++ HP+P+ + AL G S
Sbjct: 66 CHHFVRTGACKYGDSCRYFHPKPNGVNPALAAPGLGS 102
>gi|448101080|ref|XP_004199478.1| Piso0_001258 [Millerozyma farinosa CBS 7064]
gi|359380900|emb|CCE81359.1| Piso0_001258 [Millerozyma farinosa CBS 7064]
Length = 451
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 15/68 (22%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +Y K G C+ G +C P S N+ G+ + D+ C Y+ R G+CKFG+
Sbjct: 100 CKFY-KQGICQAGDSC------------PFSHNLDGM-LAADKLPCKYFQR-GNCKFGLK 144
Query: 155 CKFHHPQP 162
C H P
Sbjct: 145 CALAHFLP 152
>gi|332228957|ref|XP_003263654.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 1
[Nomascus leucogenys]
gi|441595135|ref|XP_004087218.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Nomascus
leucogenys]
Length = 338
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 38.1 bits (87), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|397507284|ref|XP_003824131.1| PREDICTED: zinc finger protein 36, C3H1 type-like 1 isoform 2 [Pan
paniscus]
Length = 338
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 37.7 bits (86), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|195398865|ref|XP_002058041.1| GJ15863 [Drosophila virilis]
gi|194150465|gb|EDW66149.1| GJ15863 [Drosophila virilis]
Length = 433
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR Y G CKYG C+F H + L + C + G C +GP
Sbjct: 125 CRPYEEAGECKYGEKCQFAH--------GYHELRNLQRHPKYKTEYCRTFHSVGFCPYGP 176
Query: 316 TCRFDH 321
C F H
Sbjct: 177 RCHFVH 182
>gi|193785835|dbj|BAG51270.1| unnamed protein product [Homo sapiens]
Length = 338
Score = 39.3 bits (90), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
>gi|1480243|emb|CAA67781.1| Berg36 [Homo sapiens]
Length = 338
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 120 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 171
Query: 316 TCRFDH 321
C F H
Sbjct: 172 RCHFIH 177
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 37/100 (37%), Gaps = 16/100 (16%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQ 78
+ E RL Q GGG +S Y P + G C YG C+F H + +
Sbjct: 90 SFSEGGERLLPTQKQPGGGQVNSSRYKTELCRP----FEENGACKYGDKCQFAHGIHELR 145
Query: 79 GA----QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
+Y+ EL C + G C YG C + H
Sbjct: 146 SLTRHPKYKTEL--------CRTFHTIGFCPYGPRCHFIH 177
>gi|17368847|sp|Q9DD48.1|MKRN2_SERQU RecName: Full=Probable E3 ubiquitin-protein ligase makorin-2;
AltName: Full=Zinc finger protein YGHLC3HC4
gi|11559426|dbj|BAB18861.1| zinc finger protein YGHLC3HC4 [Seriola quinqueradiata]
gi|11559471|dbj|BAB18815.1| ring zinc finger protein MAKORIN2 [Seriola quinqueradiata]
gi|13486618|dbj|BAB39861.1| ring zinc finger protein MAKORIN2 [Seriola quinqueradiata]
gi|13486620|dbj|BAB39862.1| ring zinc finger protein MAKORIN2 [Seriola quinqueradiata]
gi|13486622|dbj|BAB39863.1| ring zinc finger protein MAKORIN2 [Seriola quinqueradiata]
gi|18250953|dbj|BAB83930.1| Makorin ring finger protein 2 [Seriola quinqueradiata]
gi|25137477|dbj|BAC24086.1| ring finger protein MAKORIN2 [Seriola quinqueradiata]
Length = 423
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y+L G C+ GS C + H D N + P + C +Y R G C +
Sbjct: 5 QVTCRYFLH-GVCREGSRCLFSH--DLNNSKPSTI-------------CKFYQR-GVCAY 47
Query: 152 GVACKFHHPQPSSLG 166
G C++ H +PSS G
Sbjct: 48 GERCRYDHIKPSSRG 62
>gi|330934206|ref|XP_003304457.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
gi|311318917|gb|EFQ87453.1| hypothetical protein PTT_17055 [Pyrenophora teres f. teres 0-1]
Length = 256
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 25/117 (21%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH--PKD 117
GLC G C F H + P+C YY +T TC G C Y H P+
Sbjct: 83 GLCKKGETCEFLHEYNLRR-------------MPECSYYARTQTCSNGDDCLYLHIDPEA 129
Query: 118 RNGAGP---VSFNILG----LPMRQDEKSCPYYMRTGSCKFGVACKF-HHPQ-PSSL 165
+ + P F LG L + +K CP+Y+ G C G CK+ HP+ P+ L
Sbjct: 130 KRPSCPHYDRGFCPLGPHCSLKHNKKDKLCPFYL-CGFCPEGKGCKYGAHPRYPTDL 185
>gi|213511967|ref|NP_001133923.1| Butyrate response factor 1 [Salmo salar]
gi|209155826|gb|ACI34145.1| Butyrate response factor 1 [Salmo salar]
Length = 364
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G+CKYG+ C+F H + + G P +A C + +G C +G
Sbjct: 126 CRSFQENGSCKYGSKCQFAHGEPELR-------GLYRHPKYKTEA-CRTFYNFGYCPYGA 177
Query: 316 TCRFDHPYAGYPI 328
C F H P+
Sbjct: 178 RCHFIHEEKLTPL 190
>gi|14587778|dbj|BAB61754.1| zinc finger protein YGHLC3HC4 [Seriola quinqueradiata]
Length = 421
Score = 39.3 bits (90), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y+L G C+ GS C + H D N + P + C +Y R G C +
Sbjct: 3 QVTCRYFLH-GVCREGSRCLFSH--DLNNSKPSTI-------------CKFYQR-GVCAY 45
Query: 152 GVACKFHHPQPSSLG 166
G C++ H +PSS G
Sbjct: 46 GERCRYDHIKPSSRG 60
>gi|340375929|ref|XP_003386486.1| PREDICTED: hypothetical protein LOC100633552 [Amphimedon
queenslandica]
Length = 297
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 12/71 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA----QYREELPERNGQPDCGYYLKTGTCKYGS 108
C Y+ G C YG C+F H + + +Y+ EL C + TG C YGS
Sbjct: 78 CRPYQEYGYCKYGEKCQFAHGMHDLRSLPRHPKYKTEL--------CRTFYSTGYCPYGS 129
Query: 109 TCKYHHPKDRN 119
C + H K+ +
Sbjct: 130 RCHFIHSKNES 140
>gi|358420073|ref|XP_003584415.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 686
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 399 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 444
>gi|327268246|ref|XP_003218909.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Anolis carolinensis]
Length = 487
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 23/35 (65%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
+D +CP+Y++TG+C+FG C H P+S T L
Sbjct: 196 KDRANCPFYIKTGACRFGDRCSRKHNYPTSSQTLL 230
>gi|385301812|gb|EIF45975.1| protein yth1 [Dekkera bruxellensis AWRI1499]
Length = 270
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 44/119 (36%), Gaps = 26/119 (21%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C ++ R GLC G +C F H ++ P+C YY G C C Y
Sbjct: 134 CKYWLR-GLCKMGDDCDFLHEYNLSK-------------MPECAYYAANGVCLQADECIY 179
Query: 113 HHPKDRNGAGPVSFNILGL---------PMRQDEKS-CPYYMRTGSCKFGVACKFHHPQ 161
H D P +N L P R K CP Y+ G C G C+ HP+
Sbjct: 180 LH-VDPKSKIPECYNYSNLGFCPEGPKCPRRHVRKVMCPRYL-AGFCPKGPECELAHPK 236
>gi|281349874|gb|EFB25458.1| hypothetical protein PANDA_013548 [Ailuropoda melanoleuca]
Length = 252
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 36/82 (43%), Gaps = 9/82 (10%)
Query: 254 PDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGPLGLPSRPGQAICSNYS 306
P+C +Y G C +C F H P+ +I GPL + IC NY
Sbjct: 94 PECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGPLCRHRHTRRVICVNY- 151
Query: 307 MYGICKFGPTCRFDHPYAGYPI 328
+ G C GP+C+F HP P+
Sbjct: 152 LVGFCPEGPSCKFMHPRFELPM 173
>gi|195447116|ref|XP_002071071.1| GK25600 [Drosophila willistoni]
gi|194167156|gb|EDW82057.1| GK25600 [Drosophila willistoni]
Length = 451
Score = 39.3 bits (90), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 40/111 (36%), Gaps = 21/111 (18%)
Query: 220 NLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPD---------CRYYMNTGTCKYGAD 270
+L+ N G + +H +Q+ P P QP CR Y G CKYG
Sbjct: 116 SLVTIIENLGSMN----LHRKLERTQSEPLPPQQPMNTSRYKTELCRPYEEAGECKYGEK 171
Query: 271 CKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
C+F H + L + C + G C +GP C F H
Sbjct: 172 CQFAHGYHELRN--------LQRHPKYKTEYCRTFHSVGFCPYGPRCHFVH 214
>gi|392346719|ref|XP_003749617.1| PREDICTED: zinc finger CCCH domain-containing protein 6 [Rattus
norvegicus]
Length = 1256
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 35/104 (33%), Gaps = 34/104 (32%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G C G +C+FNH A + + C YYL+ G C G C Y H
Sbjct: 353 YFLEGRCIKGDHCKFNHDAELEKKKEV------------CKYYLQ-GYCTKGENCIYMH- 398
Query: 116 KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
+E C +Y C G CKF H
Sbjct: 399 --------------------NEFPCKFYHSGAKCYQGDKCKFSH 422
>gi|410076854|ref|XP_003956009.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
gi|372462592|emb|CCF56874.1| hypothetical protein KAFR_0B05780 [Kazachstania africana CBS 2517]
Length = 298
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G CKYG C+F H + SN +RP C N+ G C +G
Sbjct: 198 CESFTTKGFCKYGNKCQFAHGLTELKFKQRSN----NFRTRP----CINWQKLGYCPYGK 249
Query: 316 TCRFDH 321
C F H
Sbjct: 250 RCCFKH 255
>gi|257219672|gb|ACV51810.1| ZRSR2Y, partial [Bos taurus]
Length = 445
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 158 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 203
>gi|432107119|gb|ELK32542.1| Zinc finger protein 36, C3H1 type-like 1 [Myotis davidii]
Length = 319
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + G CKYG C+F H + L + +C + G C +GP
Sbjct: 101 CRPFEENGACKYGDKCQFAH--------GIHELRSLTRHPKYKTELCRTFHTIGFCPYGP 152
Query: 316 TCRFDH 321
C F H
Sbjct: 153 RCHFIH 158
>gi|426201842|gb|EKV51765.1| hypothetical protein AGABI2DRAFT_62064 [Agaricus bisporus var.
bisporus H97]
Length = 738
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+Y A C+F H ++ + + + + IC + + G C +G
Sbjct: 437 CRSWEEKGTCRYAAKCQFAHGEDELRK--------VSRHPKYKTEICRTFWVSGSCPYGK 488
Query: 316 TCRFDH 321
C F H
Sbjct: 489 RCCFIH 494
>gi|359082061|ref|XP_003588255.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Bos taurus]
Length = 130
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 27 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 72
>gi|255566961|ref|XP_002524463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223536251|gb|EEF37903.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 530
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 48/117 (41%), Gaps = 18/117 (15%)
Query: 52 DCLFYRRTGL-CGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTC 110
DC+++ + L C G C + H A R DC Y+L G C Y TC
Sbjct: 13 DCVYFLASPLTCKKGLECEYRHNEIA------------RLNPRDCWYWL-AGDC-YNPTC 58
Query: 111 KYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH-PQPSSL 165
+ HP + + GP + +P + C Y+ G C G C F H P+ +S
Sbjct: 59 AFRHPPLEMHAEGPPELSSSSVPANKTNVPC-YFFFNGFCNKGDRCFFMHGPEANSF 114
>gi|431920161|gb|ELK18200.1| Tristetraproline [Pteropus alecto]
Length = 326
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 159
Query: 316 TCRFDH 321
C F H
Sbjct: 160 RCHFIH 165
>gi|298712712|emb|CBJ48737.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 485
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 16/87 (18%)
Query: 41 ASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH-----PAYAAQGAQYREELPERNGQPD- 94
A+P R C FY + G C YG++CRF H A GA + P R +P
Sbjct: 2 AAPSSGRQSRTLCTFYEK-GSCRYGASCRFTHGTSDSRELRADGAAGETQTP-RQARPTA 59
Query: 95 -------CGYYLKTGTCKYGSTCKYHH 114
C ++ K G C G++C++ H
Sbjct: 60 STSSKEPCRFFAK-GKCVRGASCRFLH 85
>gi|348554507|ref|XP_003463067.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Cavia porcellus]
Length = 490
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIRSMFTTFG 209
>gi|195123697|ref|XP_002006340.1| GI18620 [Drosophila mojavensis]
gi|193911408|gb|EDW10275.1| GI18620 [Drosophila mojavensis]
Length = 369
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 77/181 (42%), Gaps = 30/181 (16%)
Query: 155 CKFHHPQPSSLGTALPLTGNASLGSMGSSVLPSSGLQ-----YAGIVPAPGWNTYMGNI- 208
CK+ HP P L L + G L ++ ++++ G+ +G VPA N Y+ I
Sbjct: 56 CKYFHP-PQHLKDQLLINGRNHL-ALKNALMQQMGMAPGQQVISGQVPAVAANPYLTGIP 113
Query: 209 -GPLSPTSIAGSNLIYSSRNQGDLGAGAQM-----HILSASSQNLPERPDQPDCRYYMNT 262
SP G +L+ + +Q+ + + Q +P CR ++
Sbjct: 114 ANTYSPYYATG-HLVPTLLGPDPTAVASQLGPVVPQTVQVAQQKIPRSDRLEVCREFLR- 171
Query: 263 GTCKYG-ADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGPTCRFDH 321
G CK ++C+F HP+E +A+ +I +C + ++ G C P CR+ H
Sbjct: 172 GACKRAESECRFAHPQESVARHDDGSI-----------TVCMD-AVKGRCARDP-CRYFH 218
Query: 322 P 322
P
Sbjct: 219 P 219
>gi|356508985|ref|XP_003523233.1| PREDICTED: uncharacterized protein LOC100783856 [Glycine max]
Length = 697
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 38/137 (27%)
Query: 60 GLCGYGSNCRFNHPAYAAQGA---QYREELPERNGQPDCG--YYLKTGT----------- 103
G C GS+C F H + + +YRE+ R P G Y LK+G
Sbjct: 16 GKCRRGSHCHFLHDNQNHEDSWEDKYREDGAPRYSAPHEGRDYSLKSGRSNEACINFPKG 75
Query: 104 -CKYGSTCKYHHPKDRNGAGPVSFNILGL--------------------PMRQDEKSCPY 142
C+ G++CK+ H + +G VS + L P R + C +
Sbjct: 76 RCRMGASCKFVHHNNSDGHSKVSVDELAREREIDRRHRDSSFEQGGGHGPNRSGDTLCKF 135
Query: 143 YMRTGSCKFGVACKFHH 159
+ G C+ G C+F H
Sbjct: 136 FA-NGHCRNGKYCRFSH 151
>gi|213407162|ref|XP_002174352.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
gi|212002399|gb|EEB08059.1| zinc finger protein LEE1 [Schizosaccharomyces japonicus yFS275]
Length = 518
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 29/62 (46%), Gaps = 16/62 (25%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+R+ G C G+NC F+H N + C Y+LK G CK+GS C
Sbjct: 57 CKFFRQ-GACTAGNNCPFSHSL--------------DNERSPCKYFLK-GNCKFGSKCAL 100
Query: 113 HH 114
H
Sbjct: 101 SH 102
>gi|409083106|gb|EKM83463.1| hypothetical protein AGABI1DRAFT_33015 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 748
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+Y A C+F H ++ + + + + IC + + G C +G
Sbjct: 447 CRSWEEKGTCRYAAKCQFAHGEDELRKVSRH--------PKYKTEICRTFWVSGSCPYGK 498
Query: 316 TCRFDH 321
C F H
Sbjct: 499 RCCFIH 504
>gi|395821701|ref|XP_003784175.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Otolemur garnettii]
Length = 482
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLGS---MGSSVLPSSG 189
+ +D +CP+Y +TG+C+FG C H P+S T L + + G P +G
Sbjct: 160 VEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIKSMFTTFGMEQCRRDDYDPDAG 219
Query: 190 LQYA 193
L+Y+
Sbjct: 220 LEYS 223
>gi|358420032|ref|XP_003584397.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
gi|359082042|ref|XP_003588252.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2 [Bos
taurus]
Length = 477
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 168 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 213
>gi|366990107|ref|XP_003674821.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
gi|342300685|emb|CCC68448.1| hypothetical protein NCAS_0B03640 [Naumovozyma castellii CBS 4309]
Length = 376
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + G CKYG C+F H + SN ++P C N++ G C +G
Sbjct: 275 CESFTTKGHCKYGNKCQFAHGLHELKIKQRSN----NFRTKP----CVNWTKLGYCPYGK 326
Query: 316 TCRFDH 321
C F H
Sbjct: 327 RCCFKH 332
>gi|56118476|ref|NP_001007933.1| cleavage and polyadenylation specificity factor subunit 4 [Xenopus
(Silurana) tropicalis]
gi|82181478|sp|Q66KE3.1|CPSF4_XENTR RecName: Full=Cleavage and polyadenylation specificity factor
subunit 4
gi|51513396|gb|AAH80440.1| cpsf4 protein [Xenopus (Silurana) tropicalis]
Length = 269
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 57/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCEFFLKSACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCIEGPNCKFMHPRFELPM 173
>gi|328851409|gb|EGG00564.1| hypothetical protein MELLADRAFT_32022 [Melampsora larici-populina
98AG31]
Length = 63
Score = 38.9 bits (89), Expect = 4.5, Method: Composition-based stats.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + GTC+Y C+F H ++ + P+ + IC + ++G C +G
Sbjct: 6 CRSWEEKGTCRYSTKCQFAHGQDELR--------PVSRHPKFKTEICRTFCLHGSCPYGK 57
Query: 316 TCRFDH 321
C F H
Sbjct: 58 RCCFLH 63
>gi|189525066|ref|XP_001920562.1| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Danio rerio]
Length = 635
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 135 QDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
+D+ +CP++++TG+C+FG C H P+S T + S G
Sbjct: 180 KDKANCPFFLKTGACRFGDRCSRKHDHPASSCTLMVRGMFVSFG 223
>gi|145474127|ref|XP_001423086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390146|emb|CAK55688.1| unnamed protein product [Paramecium tetraurelia]
Length = 141
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 33/74 (44%), Gaps = 7/74 (9%)
Query: 248 PERPDQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSM 307
E+ C+ ++ G+CKY +C F H + +N ++P C NY
Sbjct: 40 EEKKKTEICKNFLFKGSCKYQENCSFAHGDNELRDRVPAN---ENFKTKP----CKNYHK 92
Query: 308 YGICKFGPTCRFDH 321
+G C +G C++ H
Sbjct: 93 FGTCSYGLRCQYLH 106
>gi|71834630|ref|NP_001025418.1| zinc finger protein 36, C3H type, homolog [Danio rerio]
gi|66911936|gb|AAH97188.1| Zgc:114130 [Danio rerio]
Length = 329
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 38/97 (39%), Gaps = 15/97 (15%)
Query: 81 QYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSC 140
+Y+ EL C + + G CKYG C++ H GP L + + C
Sbjct: 75 RYKTEL--------CRTFAERGLCKYGGKCQFAH-------GPEELRDLNRHPKYKTEPC 119
Query: 141 PYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASL 177
+ G C +G+ C F H + P T N ++
Sbjct: 120 RTFHSIGFCPYGIRCHFVHNAEDDQAQSRPQTSNPTV 156
>gi|395837998|ref|XP_003791914.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Otolemur garnettii]
Length = 493
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 164 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 209
>gi|401825157|ref|XP_003886674.1| CCCH-type Zn-finger protein [Encephalitozoon hellem ATCC 50504]
gi|395459819|gb|AFM97693.1| CCCH-type Zn-finger protein [Encephalitozoon hellem ATCC 50504]
Length = 346
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 43/114 (37%), Gaps = 23/114 (20%)
Query: 26 RLKIHDNQEGGGVAQASPYPARPGEPD----------CLFYRRTGLCGYGSNCRFNHPA- 74
RLK HD + G Q AR P+ C + G C YG C+F H
Sbjct: 81 RLKGHDLKVPAGTTQTHFSSARGSHPNKKYQLYKTEMCRSHTEIGYCKYGDKCQFAHSKA 140
Query: 75 ---YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY-HHPKDRNGAGPV 124
Y + +Y+ E C + + G+C YG C + H P G PV
Sbjct: 141 ELRYVQRHPKYKTET--------CKTFWEEGSCPYGKRCCFIHIPNTDMGNLPV 186
>gi|328851501|gb|EGG00655.1| hypothetical protein MELLADRAFT_93107 [Melampsora larici-populina
98AG31]
Length = 720
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/68 (26%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 103 TCKYGSTCKYHHP----KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFH 158
+ KY + HP + G G ++ I P + E+ C ++ +TG+C+ G+ C +
Sbjct: 343 SAKYATQAPRRHPAWEPRIGRGRGSMTMKIARPPRMKKEEQCRFFAKTGACRKGLTCVYQ 402
Query: 159 HPQPSSLG 166
H +PS++
Sbjct: 403 H-EPSNVA 409
>gi|270289752|ref|NP_001161891.1| tristetraprolin [Sus scrofa]
gi|335289681|ref|XP_003355955.1| PREDICTED: tristetraprolin-like [Sus scrofa]
gi|262069462|gb|ACY08229.1| tristetraprolin [Sus scrofa]
gi|299832919|gb|ADJ56410.1| tristetraprolin [Sus scrofa]
gi|304422959|gb|ADM32892.1| tristetraprolin [Sus scrofa]
Length = 326
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 108 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 159
Query: 316 TCRFDH 321
C F H
Sbjct: 160 RCHFIH 165
>gi|156837017|ref|XP_001642545.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
gi|156113087|gb|EDO14687.1| hypothetical protein Kpol_344p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 304
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C+ + G CKYG C+F H + + SN ++P C N++ G C +G
Sbjct: 184 CKTFTTKGYCKYGNKCQFAHGLHEVKFKSRSN----NYRTKP----CINWTKLGYCPYGV 235
Query: 316 TCRFDH 321
C F H
Sbjct: 236 RCCFKH 241
>gi|17369657|sp|Q9TT91.1|MKRN1_MACEU RecName: Full=E3 ubiquitin-protein ligase makorin-1
gi|6572968|gb|AAF17489.1|AF192786_1 makorin 1 [Macropus eugenii]
Length = 478
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 13/61 (21%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G+NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 59 YFMHGVCKKGNNCRYSHDLSTSQSAMV------------CRYYQR-GCCAYGDRCRYEHT 105
Query: 116 K 116
K
Sbjct: 106 K 106
Score = 38.1 bits (87), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 41/98 (41%), Gaps = 21/98 (21%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y++ G CK G+ C+Y H L Q C YY R G C +
Sbjct: 54 QVTCRYFMH-GVCKKGNNCRYSH---------------DLSTSQSAMVCRYYQR-GCCAY 96
Query: 152 GVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPS 187
G C++ H +P TA L + L + SS LP+
Sbjct: 97 GDRCRYEHTKPLKREEVTAANLAAKSDLPA--SSSLPA 132
>gi|312072010|ref|XP_003138871.1| zinc finger C-x8-C-x5-C-x3-H type containing protein [Loa loa]
Length = 347
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 32/127 (25%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N C+ G+ C F H + S+P + Y + G C FG
Sbjct: 15 CRYFAN-NICREGSSCPFSHDRN----------------SKPDRTC--RYYLIGKCAFGT 55
Query: 316 TCRFDH---PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSP-----DA 362
+CR+DH P G S P ++++ N + + ++ S DA
Sbjct: 56 SCRYDHKRPPLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFSVDA 115
Query: 363 SSKIPNW 369
+ IP+W
Sbjct: 116 AEFIPSW 122
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 69/190 (36%), Gaps = 56/190 (29%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
Y C+ GS+C + H DRN + +++C YY+ G C FG +C++
Sbjct: 17 YFANNICREGSSCPFSH--DRNS--------------KPDRTCRYYL-IGKCAFGTSCRY 59
Query: 158 HHPQPSSLGTALPLTGNASLGSMGSSVLPS----------SGLQYAGIVPAPGWNTYMGN 207
H +P PL G ++ S S S + A A ++++ +
Sbjct: 60 DHKRP-------PLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFS 112
Query: 208 I--GPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYYMNTGTC 265
+ P+ + YS+ G G+ LP P Y TG C
Sbjct: 113 VDAAEFIPSWKISALNEYSTVASGSFGS-------------LPLCP-------YFETGDC 152
Query: 266 KYGADCKFHH 275
G C+F H
Sbjct: 153 DKGDKCQFVH 162
>gi|224066791|ref|XP_002302217.1| predicted protein [Populus trichocarpa]
gi|222843943|gb|EEE81490.1| predicted protein [Populus trichocarpa]
Length = 2120
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 42/108 (38%), Gaps = 22/108 (20%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC + +C+ H +PER PDC Y+L+ G C C Y H
Sbjct: 1926 GLC-FNPDCKLTHKV-----------IPER--MPDCSYFLQ-GLC-TNKNCPYRHVHVNP 1969
Query: 120 GAGPVSFNILGLPMRQDE------KSCPYYMRTGSCKFGVACKFHHPQ 161
A + G +E CP + GSC G CK HHP+
Sbjct: 1970 NASTCEGFLRGYCADGNECPKKHSYVCPSFEAIGSCPQGSKCKLHHPK 2017
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 294 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFG 339
>gi|395539534|ref|XP_003771723.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Sarcophilus
harrisii]
Length = 432
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 13/77 (16%)
Query: 56 YRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHP 115
Y G+C G+NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 13 YFMHGVCKEGNNCRYSHDLSTSQSAMV------------CRYYQR-GCCAYGDRCRYEHT 59
Query: 116 KDRNGAGPVSFNILGLP 132
K + N+ P
Sbjct: 60 KPLKREEVTAANLAAKP 76
>gi|148687045|gb|EDL18992.1| cleavage and polyadenylation specific factor 4, isoform CRA_a [Mus
musculus]
Length = 292
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 58/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 47 LGAQPLPFPGMDKSGAAVCEFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 106
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQ-----SAASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 107 EFLHEYDMT-----KMPECYFYSKFGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 160
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP+C+F HP P+
Sbjct: 161 LCRHRHTRRVICVNY-LVGFCPEGPSCKFMHPRFELPM 197
>gi|405958077|gb|EKC24240.1| Uncharacterized protein C18H10.09 [Crassostrea gigas]
Length = 764
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 28/107 (26%)
Query: 53 CLFYRRTGLCGYGSNCRFNH----------------------PAYAAQGAQYREELPERN 90
C + R G C YG+NCRF H P +A++ ++ + +
Sbjct: 84 CFSFERYGNCKYGNNCRFLHALPSDEKVKTSKSAKSYLADKKPQHASKKTKHDK---QDQ 140
Query: 91 GQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDE 137
G+ ++ + G C+ G C+++HP N A V + + L ++E
Sbjct: 141 GRRRVCHFFQEGHCQKGDKCRFYHP---NSANKVEVSDVILQGDKEE 184
>gi|339249059|ref|XP_003373517.1| conserved hypothetical protein [Trichinella spiralis]
gi|316970336|gb|EFV54297.1| conserved hypothetical protein [Trichinella spiralis]
Length = 747
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 9/63 (14%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C L+ CK+G C+Y H K + LP D +CP + G CKFG+
Sbjct: 52 CPNILENIECKFGENCRYAHDKAAHWDNK-------LPDISD--NCPLFEELGFCKFGLN 102
Query: 155 CKF 157
C+F
Sbjct: 103 CRF 105
>gi|242044496|ref|XP_002460119.1| hypothetical protein SORBIDRAFT_02g023040 [Sorghum bicolor]
gi|241923496|gb|EER96640.1| hypothetical protein SORBIDRAFT_02g023040 [Sorghum bicolor]
Length = 588
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 39/102 (38%), Gaps = 28/102 (27%)
Query: 17 ADNIEEAIWRLKI----HDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH 72
A+NI+ WR + H +GGG+ C + +G C GS C + H
Sbjct: 274 AENIDSQYWRYDVKRQRHGEADGGGL--------------CFKFTSSGSCQRGSKCNYRH 319
Query: 73 PAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
EE E + C +L G C+ G CK+ H
Sbjct: 320 D----------EEALEHYQRNVCFDFLNKGKCERGPECKFVH 351
>gi|426257963|ref|XP_004023719.1| PREDICTED: LOW QUALITY PROTEIN: U2 small nuclear ribonucleoprotein
auxiliary factor 35 kDa subunit-related protein 2-like
[Ovis aries]
Length = 502
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 193 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 238
>gi|348541563|ref|XP_003458256.1| PREDICTED: U2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2-like [Oreochromis
niloticus]
Length = 595
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 28/51 (54%)
Query: 119 NGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTAL 169
N PV+ + +D +CP++++TG+C+FG C H P++ T +
Sbjct: 157 NPEAPVTVSSENFGTERDVANCPFFLKTGACRFGDRCSRKHTYPTTSPTLM 207
>gi|327288272|ref|XP_003228852.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Anolis carolinensis]
Length = 269
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 57/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCDFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKYGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPACKFMHPRFELPM 173
>gi|254584178|ref|XP_002497657.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
gi|238940550|emb|CAR28724.1| ZYRO0F10560p [Zygosaccharomyces rouxii]
Length = 342
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 29/65 (44%), Gaps = 7/65 (10%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C + GTC+YG+ C++ H G + F G R K C + + G C +G
Sbjct: 246 CESFTTKGTCRYGNKCQFAH-----GLSELKFRQFGNNFRT--KPCINWTKLGYCPYGKR 298
Query: 155 CKFHH 159
C F H
Sbjct: 299 CCFKH 303
Score = 38.1 bits (87), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 28/66 (42%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
C + GTC+YG C+F H + N ++P C N++ G C +G
Sbjct: 246 CESFTTKGTCRYGNKCQFAHGLSELKFRQFGN----NFRTKP----CINWTKLGYCPYGK 297
Query: 316 TCRFDH 321
C F H
Sbjct: 298 RCCFKH 303
>gi|82268116|sp|Q4SRI6.1|MKRN1_TETNG RecName: Full=Probable E3 ubiquitin-protein ligase makorin-1
gi|47217223|emb|CAF96746.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 17/66 (25%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+M+ G CK G +C++ H +N S+P IC + G C FG
Sbjct: 24 CRYFMH-GLCKEGDNCRYSHD--------LTN-------SKPAAMICKFFQK-GNCVFGE 66
Query: 316 TCRFDH 321
CRFDH
Sbjct: 67 RCRFDH 72
>gi|326912239|ref|XP_003202461.1| PREDICTED: e3 ubiquitin-protein ligase makorin-1-like [Meleagris
gallopavo]
Length = 464
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 13/62 (20%)
Query: 55 FYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHH 114
Y G+C G NCR++H +Q A C YY + G C YG C+Y H
Sbjct: 49 LYFMHGVCKEGDNCRYSHDLSTSQSAMV------------CRYY-QRGCCAYGDHCRYEH 95
Query: 115 PK 116
K
Sbjct: 96 TK 97
>gi|260796101|ref|XP_002593043.1| hypothetical protein BRAFLDRAFT_120702 [Branchiostoma floridae]
gi|229278267|gb|EEN49054.1| hypothetical protein BRAFLDRAFT_120702 [Branchiostoma floridae]
Length = 1736
Score = 38.9 bits (89), Expect = 4.9, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 79 GAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAG 122
GA RE ER+ P C Y+++ G C +G+TC++ HP ++ +G
Sbjct: 53 GAARRERSGERSSDP-CKYWVQDGQCPFGNTCRFVHPTSQSPSG 95
>gi|4972326|dbj|BAA12906.2| YGHL2 [Seriola quinqueradiata]
Length = 392
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 35/75 (46%), Gaps = 17/75 (22%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y+L G C+ GS C + H D N + P + C +Y R G C +
Sbjct: 3 QVTCRYFLH-GVCREGSRCLFSH--DLNNSKPSTI-------------CKFYQR-GVCAY 45
Query: 152 GVACKFHHPQPSSLG 166
G C++ H +PSS G
Sbjct: 46 GERCRYDHIKPSSRG 60
>gi|417398920|gb|JAA46493.1| Putative ccch-type zn-finger protein [Desmodus rotundus]
Length = 322
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 104 CRTFSESGRCRYGAKCQFAHGPGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 155
Query: 316 TCRFDH 321
C F H
Sbjct: 156 RCHFIH 161
>gi|71406680|ref|XP_805858.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70869429|gb|EAN84007.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 276
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
+ ++ K+C + G+CKFG C +HH PS A P ASLG
Sbjct: 116 VERNRKTCKQFWENGACKFGSRCLYHHLAPSQGHLADPSVTKASLG 161
>gi|443924052|gb|ELU43129.1| no arches protein [Rhizoctonia solani AG-1 IA]
Length = 287
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 37/97 (38%), Gaps = 32/97 (32%)
Query: 60 GLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRN 119
GLC G C F H + P+C ++ + GTC G C Y HPK+R
Sbjct: 102 GLCKKGDGCEFLHEYNLRR-------------MPECWWFARHGTCTAGDECLYAHPKER- 147
Query: 120 GAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACK 156
+ CP Y R G CK G++ K
Sbjct: 148 -----------------KIECPDYQR-GFCKTGLSSK 166
>gi|194227695|ref|XP_001490095.2| PREDICTED: u2 small nuclear ribonucleoprotein auxiliary factor 35
kDa subunit-related protein 2 [Equus caballus]
Length = 470
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 163 MEKDRANCPFYSKTGACRFGDRCSRKHNFPASSPTLLIRSMFTTFG 208
>gi|410931245|ref|XP_003979006.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
4-like isoform 1 [Takifugu rubripes]
Length = 263
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 58/155 (37%), Gaps = 33/155 (21%)
Query: 19 NIEEAIWRLKIHDNQEGGGVAQASPYPA--RPGEPDCLFYRRTGLCGYGSNCRFNHPAYA 76
N++ + L+I Q+ G AQ P+P + G C F+ R C G+ C F H +
Sbjct: 7 NVDHIKFDLEIAVQQQLG--AQPLPFPGMDKSGSAVCEFFMRAA-CMKGAMCPFRHISGE 63
Query: 77 AQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFN--------- 127
C ++L+ G CK G C++ H D F
Sbjct: 64 KTVV--------------CKHWLR-GLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNK 108
Query: 128 ---ILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
L + K CP+Y R G CK G C+ H
Sbjct: 109 ECPFLHIDPESKIKDCPWYDR-GFCKHGPDCRHRH 142
>gi|301784037|ref|XP_002927428.1| PREDICTED: tristetraproline-like [Ailuropoda melanoleuca]
Length = 325
Score = 38.9 bits (89), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 158
Query: 316 TCRFDH 321
C F H
Sbjct: 159 RCHFIH 164
>gi|354545401|emb|CCE42129.1| hypothetical protein CPAR2_806780 [Candida parapsilosis]
Length = 562
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 14/65 (21%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
+ K G C+ G +C P S NI G + D+ C Y++R G+CKFG+ C
Sbjct: 89 FFKQGNCQAGDSC------------PFSHNIEGA-LAADKLPCKYFLR-GNCKFGLKCAL 134
Query: 158 HHPQP 162
H P
Sbjct: 135 AHYLP 139
>gi|224105279|ref|XP_002313752.1| predicted protein [Populus trichocarpa]
gi|222850160|gb|EEE87707.1| predicted protein [Populus trichocarpa]
Length = 223
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 46/108 (42%), Gaps = 24/108 (22%)
Query: 26 RLKIHDNQEGGGVAQASPYPARPGEPDCLFYRRTGLCGYGSNCRFNH--PAYAAQGAQYR 83
+LK QE P A+ G+ + C Y +NCRFNH A+ AQ +
Sbjct: 87 QLKRERQQEKKSSVNLCPELAKTGDVNS--------CPYKNNCRFNHDLEAFKAQKPEDL 138
Query: 84 E-ELPERNGQPDCGYYLKTGTCKYGSTCKY---HHPKD--RNGAGPVS 125
E E P NG+ C C YG C++ H +D RNG +S
Sbjct: 139 EGECPFVNGEGSC--------CPYGLACRFYGTHKGRDGVRNGKKQIS 178
>gi|395837385|ref|XP_003791616.1| PREDICTED: E3 ubiquitin-protein ligase makorin-1 [Otolemur
garnettii]
Length = 492
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 68/196 (34%), Gaps = 33/196 (16%)
Query: 92 QPDCGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKF 151
Q C Y++ G CK G C+Y H + G V C YY R G C +
Sbjct: 68 QVTCRYFMH-GVCKEGDNCRYSHDLSDSPYGVV---------------CKYYQR-GYCIY 110
Query: 152 GVACKFHHPQP--SSLGTALPLTGNASLGSMGSSVLPSSGLQYAGIVPAPGWNTYMGNIG 209
G C++ H +P TA LT +S+ + S L A N+ ++G
Sbjct: 111 GDRCRYEHSKPLKQEEATATDLTTKSSVAASSSLSSAVGPLVEMNTSEAESRNSNFRSVG 170
Query: 210 PLSPTSIAGSNLI----YSSRNQGDLGA----GAQMHILSASSQNLPERPDQ--PDCRYY 259
+ + Y R G+ S QN E Q P Y
Sbjct: 171 AGPEDWVNAIEFVPGQPYCGRTAPSCTEAPLQGSVTKEESEKEQNTVETKKQLCP----Y 226
Query: 260 MNTGTCKYGADCKFHH 275
G C+YG +C + H
Sbjct: 227 AAVGECRYGENCVYLH 242
>gi|348562835|ref|XP_003467214.1| PREDICTED: tristetraprolin-like [Cavia porcellus]
Length = 535
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 323 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 374
Query: 316 TCRFDH 321
C F H
Sbjct: 375 RCHFIH 380
>gi|296415799|ref|XP_002837573.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633446|emb|CAZ81764.1| unnamed protein product [Tuber melanosporum]
Length = 615
Score = 38.9 bits (89), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 16/65 (24%)
Query: 98 YLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKF 157
+ + GTC+ G C + H D P S D+ C Y+ + G+CKFGV C
Sbjct: 92 FFRQGTCQAGKACPFSHSMD-----PTS----------DQAPCKYFSK-GNCKFGVKCAL 135
Query: 158 HHPQP 162
H P
Sbjct: 136 AHILP 140
>gi|440910333|gb|ELR60141.1| Tristetraprolin, partial [Bos grunniens mutus]
Length = 318
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 100 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 148
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 149 YGSRCHFIH 157
>gi|387015182|gb|AFJ49710.1| Cleavage and polyadenylation specificity factor subunit 4-like
[Crotalus adamanteus]
Length = 268
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 57/158 (36%), Gaps = 16/158 (10%)
Query: 180 MGSSVLPSSGLQYAGIVPAPGWNTYMGNIGPLSPTS-IAGSNLIYSSR-NQGDLGAGAQM 237
+G+ LP G+ +G + G + P I+G + +G G Q
Sbjct: 23 LGAQPLPFPGMDKSGAAVCDFFLKAACGKGGMCPFRHISGEKTVVCKHWLRGLCKKGDQC 82
Query: 238 HILSASSQNLPERPDQPDCRYYMNTGTCKYGADCKFHH--PKERIAQS-----AASNIGP 290
L P+C +Y G C +C F H P+ +I GP
Sbjct: 83 EFLHEYDMT-----KMPECYFYSKYGECS-NKECPFLHIDPESKIKDCPWYDRGFCKHGP 136
Query: 291 LGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPI 328
L + IC NY + G C GP C+F HP P+
Sbjct: 137 LCRHRHTRRVICVNY-LVGFCPEGPACKFMHPRFELPM 173
>gi|449329780|gb|AGE96049.1| zinc finger protein [Encephalitozoon cuniculi]
Length = 346
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 80/218 (36%), Gaps = 49/218 (22%)
Query: 8 KSNAVANQSAD--NIEEAIW--RLKIHDNQEGGGVAQASPYPARPGEPD----------C 53
++N ++N S N E+ ++ R K HD++ AQ P R + C
Sbjct: 59 QNNTISNLSTSLANKEQGLFEKRQKAHDSRASTNAAQNYPLSGRGSHANKKYQLYKTEMC 118
Query: 54 LFYRRTGLCGYGSNCRFNHPA----YAAQGAQYREELPERNGQPDCGYYLKTGTCKYGST 109
+ G C YG C+F H Y + +Y+ E C + + G+C YG
Sbjct: 119 RSHTEIGYCRYGDKCQFAHSKAELRYVQRHPKYKTET--------CKTFWEEGSCPYGKR 170
Query: 110 CKYHHPKDRNGAGPVSFNILGLPM----RQDEKSCPYYMRTGSCKFGVACKFHHPQPSSL 165
C + H + +I LP+ R K+C Y G+ HP +
Sbjct: 171 CCFIHIPNT--------DIANLPIHGRQRDSGKNCTGYT------LGIEID-EHPHDELI 215
Query: 166 GTA----LPLTGNASLGSMGSSVLPSSGLQYAGIVPAP 199
T +PL LG +G + + +G+ P
Sbjct: 216 YTKIEQHMPLVEGNPLGCLGKDREGTDEIWISGMSQDP 253
>gi|343958430|dbj|BAK63070.1| signal recognition particle 19kDa [Pan troglodytes]
Length = 310
Score = 38.9 bits (89), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%)
Query: 133 MRQDEKSCPYYMRTGSCKFGVACKFHHPQPSSLGTALPLTGNASLG 178
M +D +CP+Y +TG+C+FG C H P+S T L + + G
Sbjct: 1 MEKDRANCPFYSKTGACRFGDRCSRKHNFPTSSPTLLIKSMFTTFG 46
>gi|281344081|gb|EFB19665.1| hypothetical protein PANDA_017207 [Ailuropoda melanoleuca]
Length = 318
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 100 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 151
Query: 316 TCRFDH 321
C F H
Sbjct: 152 RCHFIH 157
>gi|145509076|ref|XP_001440482.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407699|emb|CAK73085.1| unnamed protein product [Paramecium tetraurelia]
Length = 195
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 31/85 (36%), Gaps = 3/85 (3%)
Query: 42 SPYPARPGEPDCLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKT 101
Y + C + TG C +G C F H Q + L ++ C Y
Sbjct: 52 EEYTKKKKTELCKNFELTGFCKFGDECSFAHGQLELQA---KTHLHQKYKTKPCNRYFNQ 108
Query: 102 GTCKYGSTCKYHHPKDRNGAGPVSF 126
G C YG C+Y H + ++ F
Sbjct: 109 GFCPYGIRCQYLHDELKDQQKFEKF 133
>gi|111307030|gb|AAI20044.1| ZFP36 protein [Bos taurus]
gi|296477782|tpg|DAA19897.1| TPA: tristetraproline [Bos taurus]
Length = 325
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 155
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|294925662|ref|XP_002778975.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
gi|239887821|gb|EER10770.1| protein TIS11, putative [Perkinsus marinus ATCC 50983]
Length = 424
Score = 38.9 bits (89), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 18/107 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C F+ R G C +GS+C YA ++ R+ P+ C Y K G C G+ C Y
Sbjct: 77 CKFFLR-GQCKHGSDC-----GYAHDWSELRQA-PDLRKTKMCQLYRK-GQCPNGADCAY 128
Query: 113 HHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVACKFHH 159
H +D A + C ++M GSC G C+ H
Sbjct: 129 AHSRDELRATADVYKT---------SLCRFWM-NGSCNAGSKCRHAH 165
>gi|449680209|ref|XP_002153918.2| PREDICTED: uncharacterized protein LOC100206476 [Hydra
magnipapillata]
Length = 492
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 20/139 (14%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPER----------NGQPDCGYYLK 100
CLFY R G C G NC + H P A ++ R ++ N P C Y+L
Sbjct: 153 CLFYSRFGKCKRGENCHYIHDPEKVAVCTRFLRGTCKDKNCIFSHKFDPNKMPVCSYFL- 211
Query: 101 TGTCKYGSTCKYHHPKDRNGAGPVSFNILGL------PMRQDEKSCPYYMRTGSCKFGVA 154
G C C Y H + A + G ++ C ++R+G C +
Sbjct: 212 LGQCTRDK-CPYRHVNVSSSAPICEAFVKGFCPNGEKCTKKHTLECEEFLRSGICSKRKS 270
Query: 155 CKFHHPQPSSLGTALPLTG 173
C+ H G + ++G
Sbjct: 271 CRLVHRIKIKRGRTVSVSG 289
>gi|302855308|ref|XP_002959150.1| CCCH zinc finger protein [Volvox carteri f. nagariensis]
gi|300255469|gb|EFJ39773.1| CCCH zinc finger protein [Volvox carteri f. nagariensis]
Length = 65
Score = 38.9 bits (89), Expect = 5.4, Method: Composition-based stats.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 95 CGYYLKTGTCKYGSTCKYHHP-KDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGV 153
C +++TG+CKYG C + H + G+ S + + C +M T SC +G
Sbjct: 7 CEEFVRTGSCKYGDKCTFAHGWGSKEGSKEGSLH--------KTRLCERFMNTKSCPYGD 58
Query: 154 ACKFHH 159
C F H
Sbjct: 59 KCTFAH 64
>gi|241953559|ref|XP_002419501.1| zinc finger protein, putative [Candida dubliniensis CD36]
gi|223642841|emb|CAX43096.1| zinc finger protein, putative [Candida dubliniensis CD36]
Length = 505
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 12/62 (19%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGAQYREELPERNGQPDCGYYLKTGTCKYGSTCKY 112
C FYR+ G+C G++C F+H A GA ++LP C Y+ K G CK+G C
Sbjct: 120 CKFYRQ-GVCQAGNSCPFSHNLDGALGA---DKLP-------CKYFQK-GNCKFGLKCAL 167
Query: 113 HH 114
H
Sbjct: 168 AH 169
Score = 38.5 bits (88), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 44/103 (42%), Gaps = 26/103 (25%)
Query: 95 CGYYLKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGLPMRQDEKSCPYYMRTGSCKFGVA 154
C +Y + G C+ G++C + H D GA + D+ C Y+ + G+CKFG+
Sbjct: 120 CKFY-RQGVCQAGNSCPFSHNLD--GA-----------LGADKLPCKYFQK-GNCKFGLK 164
Query: 155 CKFHHPQPSSLGT----ALPLTGNA-------SLGSMGSSVLP 186
C H P L L GN S GS G+S P
Sbjct: 165 CALAHFLPDGTRVNSKGFLQLNGNGKSNNHRNSFGSYGTSSYP 207
>gi|125560223|gb|EAZ05671.1| hypothetical protein OsI_27900 [Oryza sativa Indica Group]
Length = 367
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 54/146 (36%), Gaps = 34/146 (23%)
Query: 256 CRYYMNTGTCKYGADCKFHH-----PKERIAQSAASNI---------------------- 288
C+ + C YG C F H +E +A S + ++
Sbjct: 175 CKKFYTDEGCPYGDACTFLHDEQSKARESVAISLSPSVGGGGGGGSYNSAAAAAASASAA 234
Query: 289 ---GPLGLPSRPGQAICSNYSMYGICKFGPTCRFDHPYAGYPINYGLSLPPLSILDSSLM 345
GP+ PS IC+ + M G C FG C F H A YG L + D++
Sbjct: 235 AGNGPMQKPSNWKTRICNKWEMTGYCPFGSKCHFAHGAAELH-KYGGGLVDIDSRDAAAT 293
Query: 346 ---NHQAISATHSIETSPDASSKIPN 368
+SA ET+ +++ +P+
Sbjct: 294 PDSKQAVVSAKAPAETTAASTTVLPH 319
>gi|27819622|ref|NP_776918.1| tristetraprolin [Bos taurus]
gi|1717818|sp|P53781.1|TTP_BOVIN RecName: Full=Tristetraprolin; Short=TTP; AltName: Full=Protein
TIS11A; Short=TIS11; AltName: Full=Zinc finger protein
36 homolog; Short=Zfp-36
gi|1100071|gb|AAB05819.1| tristetraprolin [Bos taurus]
Length = 324
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 31/69 (44%), Gaps = 14/69 (20%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQ---AICSNYSMYGICK 312
CR + +G C+YGA C+F H +G L SR + +C + + G C
Sbjct: 107 CRTFSESGRCRYGAKCQFAH-----------GLGELRQASRHPKYKTELCHKFYLQGRCP 155
Query: 313 FGPTCRFDH 321
+G C F H
Sbjct: 156 YGSRCHFIH 164
>gi|390478942|ref|XP_002762143.2| PREDICTED: tristetraprolin [Callithrix jacchus]
Length = 326
Score = 38.9 bits (89), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q +N P + +C + + G C +G
Sbjct: 109 CRTFSESGRCRYGAKCQFAHGLGELRQ---ANRHP-----KYKTELCHKFYLQGRCPYGS 160
Query: 316 TCRFDH 321
C F H
Sbjct: 161 RCHFIH 166
>gi|393907027|gb|EFO25206.2| zinc finger protein [Loa loa]
Length = 373
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 50/127 (39%), Gaps = 32/127 (25%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CRY+ N C+ G+ C F H + S+P + Y + G C FG
Sbjct: 15 CRYFAN-NICREGSSCPFSHDRN----------------SKPDRT--CRYYLIGKCAFGT 55
Query: 316 TCRFDH---PYAGYPINYGLSLP-----PLSILDSSLMNHQAISATHSIETSP-----DA 362
+CR+DH P G S P ++++ N + + ++ S DA
Sbjct: 56 SCRYDHKRPPLDGIKTVKSFSRVTENSNPTKVVENGCSNDEIATTAAAVNRSSHVFSVDA 115
Query: 363 SSKIPNW 369
+ IP+W
Sbjct: 116 AEFIPSW 122
>gi|440301489|gb|ELP93875.1| hypothetical protein EIN_177620 [Entamoeba invadens IP1]
Length = 111
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 8/69 (11%)
Query: 53 CLFYRRTGLCGYGSNCRFNHPAYAAQGA-------QYREELPERNGQPDCGYYLKTGTCK 105
C+F+ + G C G NC F+H A + Q+ +P C Y+ +TGTC+
Sbjct: 30 CVFFMQNGYCKKGENCTFSHDISAFMESHSSPPQKQFVSVDKLYRTKP-CKYFFETGTCR 88
Query: 106 YGSTCKYHH 114
G C + H
Sbjct: 89 KGKHCNFSH 97
>gi|294946373|ref|XP_002785044.1| hypothetical protein Pmar_PMAR011353 [Perkinsus marinus ATCC 50983]
gi|239898436|gb|EER16840.1| hypothetical protein Pmar_PMAR011353 [Perkinsus marinus ATCC 50983]
Length = 303
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 39/89 (43%), Gaps = 16/89 (17%)
Query: 200 GWNTYMGNIGPLSPTSIAGSNLIYSSRNQGDLGAGAQMHILSASSQNLPERPDQPDCRYY 259
G NT G+ GP+ P AG ++ G Q+ I + + P R C+++
Sbjct: 153 GVNTLPGSNGPMGPPVAAGMGMM-----------GQQVSIQAPA----PRRYRTELCKHF 197
Query: 260 MNTGTCKYGADCKFHHPKERIAQSAASNI 288
M G C YG C + H E I Q A N+
Sbjct: 198 ME-GKCGYGEHCSYAHSMEEIRQHVAGNL 225
>gi|156376344|ref|XP_001630321.1| predicted protein [Nematostella vectensis]
gi|156217339|gb|EDO38258.1| predicted protein [Nematostella vectensis]
Length = 752
Score = 38.5 bits (88), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 6/41 (14%)
Query: 252 DQPDCRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLG 292
D P CRYY+ C +GA+C + HP++ IA N+GP+
Sbjct: 45 DVPVCRYYLE-DRCMFGAECWYRHPEQDIA-----NVGPMA 79
>gi|410983058|ref|XP_003997861.1| PREDICTED: tristetraprolin [Felis catus]
Length = 325
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 8/66 (12%)
Query: 256 CRYYMNTGTCKYGADCKFHHPKERIAQSAASNIGPLGLPSRPGQAICSNYSMYGICKFGP 315
CR + +G C+YGA C+F H + Q++ + +C + + G C +G
Sbjct: 107 CRTFSESGRCRYGAKCQFAHGLGELRQASRH--------PKYKTELCHKFYLQGRCPYGS 158
Query: 316 TCRFDH 321
C F H
Sbjct: 159 RCHFIH 164
>gi|296480814|tpg|DAA22929.1| TPA: hypothetical protein BOS_13733 [Bos taurus]
Length = 933
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 22/134 (16%)
Query: 53 CLFYRRTGLCGYGSNCRFNH-PAYAAQGAQY-REELPERNG------------QPDCGYY 98
C++Y R G C G C + H P A ++ R + +G P C Y+
Sbjct: 682 CMYYNRFGRCNRGERCPYVHDPEKVAVCTRFVRGTCKKTDGTCPFSHHVSKEKMPVCSYF 741
Query: 99 LKTGTCKYGSTCKYHHPKDRNGAGPVSFNILGL-PM-----RQDEKSCPYYMRTGSCKFG 152
LK G C S+C Y H A + + G P+ ++ CP + R G C G
Sbjct: 742 LK-GICS-NSSCPYSHVYVSRKAEVCTDFLKGYCPLGAKCKKKHTLLCPDFSRRGVCPRG 799
Query: 153 VACKFHHPQPSSLG 166
C+ H P LG
Sbjct: 800 AQCQLLHRNPKRLG 813
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.132 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,575,092,027
Number of Sequences: 23463169
Number of extensions: 341789353
Number of successful extensions: 612866
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 440
Number of HSP's successfully gapped in prelim test: 1372
Number of HSP's that attempted gapping in prelim test: 595553
Number of HSP's gapped (non-prelim): 11278
length of query: 418
length of database: 8,064,228,071
effective HSP length: 145
effective length of query: 273
effective length of database: 8,957,035,862
effective search space: 2445270790326
effective search space used: 2445270790326
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 78 (34.7 bits)