Query 014807
Match_columns 418
No_of_seqs 221 out of 2337
Neff 9.3
Searched_HMMs 29240
Date Mon Mar 25 18:10:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014807.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014807hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ka7_A Oxidoreductase; structu 100.0 5.6E-30 1.9E-34 253.0 34.6 312 38-373 112-425 (425)
2 3nrn_A Uncharacterized protein 100.0 4.6E-26 1.6E-30 224.8 33.3 302 38-371 102-403 (421)
3 3nks_A Protoporphyrinogen oxid 99.9 4.6E-27 1.6E-31 235.6 20.7 294 67-374 141-473 (477)
4 1s3e_A Amine oxidase [flavin-c 99.9 5.9E-26 2E-30 230.1 25.4 307 66-388 142-467 (520)
5 2ivd_A PPO, PPOX, protoporphyr 99.9 4.9E-26 1.7E-30 228.2 20.9 324 27-377 114-475 (478)
6 3i6d_A Protoporphyrinogen oxid 99.9 3.1E-26 1E-30 228.9 16.6 322 27-375 115-468 (470)
7 3lov_A Protoporphyrinogen oxid 99.9 9.5E-26 3.3E-30 226.0 17.2 325 27-377 110-467 (475)
8 1sez_A Protoporphyrinogen oxid 99.9 1.8E-25 6.2E-30 225.6 18.5 332 26-377 109-495 (504)
9 2yg5_A Putrescine oxidase; oxi 99.9 4.2E-25 1.4E-29 220.0 18.5 293 65-376 141-452 (453)
10 2vvm_A Monoamine oxidase N; FA 99.9 2.4E-24 8.2E-29 216.9 21.9 294 64-377 180-487 (495)
11 4dgk_A Phytoene dehydrogenase; 99.9 7.2E-23 2.4E-27 206.4 22.9 294 70-380 164-496 (501)
12 3qj4_A Renalase; FAD/NAD(P)-bi 99.9 2.6E-21 8.8E-26 185.4 21.2 228 129-374 106-341 (342)
13 1b37_A Protein (polyamine oxid 99.9 2.6E-22 8.9E-27 200.8 14.4 299 67-377 135-460 (472)
14 4dsg_A UDP-galactopyranose mut 99.9 2.5E-22 8.4E-27 201.3 13.4 292 67-372 134-452 (484)
15 4gde_A UDP-galactopyranose mut 99.9 2.1E-21 7.3E-26 196.0 17.3 293 66-373 139-477 (513)
16 2iid_A L-amino-acid oxidase; f 99.8 1.1E-18 3.7E-23 175.7 25.2 288 65-377 178-486 (498)
17 3k7m_X 6-hydroxy-L-nicotine ox 99.8 2.1E-18 7.1E-23 170.3 26.2 273 66-374 138-425 (431)
18 2z3y_A Lysine-specific histone 99.8 1.9E-18 6.3E-23 179.5 19.1 227 128-376 394-659 (662)
19 2jae_A L-amino acid oxidase; o 99.8 1.1E-18 3.7E-23 175.3 15.8 233 126-376 230-486 (489)
20 2xag_A Lysine-specific histone 99.8 3.8E-18 1.3E-22 179.8 19.4 228 128-377 565-831 (852)
21 4gut_A Lysine-specific histone 99.7 2.8E-17 9.7E-22 172.1 12.7 229 128-373 527-775 (776)
22 2b9w_A Putative aminooxidase; 99.7 7.5E-17 2.5E-21 158.8 12.6 275 67-372 140-423 (424)
23 1rsg_A FMS1 protein; FAD bindi 99.7 1.9E-16 6.6E-21 159.9 14.7 291 67-376 136-508 (516)
24 3ayj_A Pro-enzyme of L-phenyla 99.7 5.8E-17 2E-21 166.6 9.2 307 65-385 279-689 (721)
25 1yvv_A Amine oxidase, flavin-c 99.6 2.1E-14 7.2E-19 136.6 19.9 220 131-377 106-329 (336)
26 3p1w_A Rabgdi protein; GDI RAB 99.5 1.8E-13 6.1E-18 135.1 14.6 167 24-193 141-313 (475)
27 1vg0_A RAB proteins geranylger 99.5 6E-11 2.1E-15 120.6 30.9 188 26-233 271-461 (650)
28 2bcg_G Secretory pathway GDP d 99.5 1.6E-11 5.6E-16 121.7 25.9 155 33-193 136-299 (453)
29 1d5t_A Guanine nucleotide diss 99.4 4E-11 1.4E-15 118.2 24.8 157 34-194 129-290 (433)
30 1i8t_A UDP-galactopyranose mut 99.4 8.2E-14 2.8E-18 134.4 1.3 133 67-232 126-260 (367)
31 2bi7_A UDP-galactopyranose mut 99.3 6.8E-13 2.3E-17 128.7 6.8 128 67-229 130-260 (384)
32 1v0j_A UDP-galactopyranose mut 99.3 4.1E-14 1.4E-18 138.1 -3.7 135 67-231 136-273 (399)
33 3hdq_A UDP-galactopyranose mut 98.9 2.6E-09 8.9E-14 103.3 8.5 234 66-374 153-390 (397)
34 2e1m_C L-glutamate oxidase; L- 98.8 1.1E-09 3.9E-14 94.1 2.1 96 278-377 49-154 (181)
35 1ryi_A Glycine oxidase; flavop 98.2 7.2E-05 2.5E-09 71.6 17.7 196 136-373 164-361 (382)
36 3dje_A Fructosyl amine: oxygen 98.1 7.3E-05 2.5E-09 73.2 16.6 57 137-195 162-222 (438)
37 1y56_B Sarcosine oxidase; dehy 98.1 0.00068 2.3E-08 64.8 21.9 204 136-374 149-355 (382)
38 2gag_B Heterotetrameric sarcos 98.0 0.00031 1.1E-08 67.7 19.3 197 137-374 175-375 (405)
39 3dme_A Conserved exported prot 98.0 0.0002 7E-09 67.8 17.5 206 136-371 150-367 (369)
40 3nyc_A D-arginine dehydrogenas 98.0 0.00069 2.4E-08 64.5 20.7 56 136-194 154-209 (381)
41 3axb_A Putative oxidoreductase 97.9 0.00046 1.6E-08 67.7 17.2 207 137-373 182-417 (448)
42 3cgv_A Geranylgeranyl reductas 97.8 0.0034 1.2E-07 60.1 21.1 61 137-199 103-168 (397)
43 2gf3_A MSOX, monomeric sarcosi 97.7 0.0031 1E-07 60.2 20.1 201 137-374 151-364 (389)
44 3oz2_A Digeranylgeranylglycero 97.7 0.0084 2.9E-07 57.0 22.2 61 137-199 103-168 (397)
45 3ps9_A TRNA 5-methylaminomethy 97.7 0.0013 4.3E-08 68.2 17.3 56 136-194 417-473 (676)
46 3pvc_A TRNA 5-methylaminomethy 97.6 0.00091 3.1E-08 69.4 15.6 56 136-194 412-469 (689)
47 3atr_A Conserved archaeal prot 97.6 0.0062 2.1E-07 59.7 20.6 57 137-195 101-163 (453)
48 3ihg_A RDME; flavoenzyme, anth 97.5 0.0032 1.1E-07 63.2 18.1 62 137-199 121-189 (535)
49 3kkj_A Amine oxidase, flavin-c 97.5 0.008 2.7E-07 53.4 19.1 87 282-377 243-329 (336)
50 3e1t_A Halogenase; flavoprotei 97.3 0.014 4.7E-07 58.2 18.9 56 137-194 112-172 (512)
51 2e1m_A L-glutamate oxidase; L- 97.2 0.00099 3.4E-08 63.6 9.5 112 65-190 257-369 (376)
52 2gmh_A Electron transfer flavo 97.2 0.054 1.9E-06 54.8 22.7 58 137-195 145-218 (584)
53 2rgh_A Alpha-glycerophosphate 97.2 0.014 4.7E-07 59.1 18.0 57 137-195 189-251 (571)
54 3nix_A Flavoprotein/dehydrogen 97.2 0.016 5.5E-07 55.9 17.4 63 137-200 107-173 (421)
55 3da1_A Glycerol-3-phosphate de 97.1 0.01 3.4E-07 60.0 16.0 57 136-194 170-232 (561)
56 2e1m_B L-glutamate oxidase; L- 97.1 0.00045 1.5E-08 55.1 4.8 112 179-309 4-117 (130)
57 3rp8_A Flavoprotein monooxygen 97.1 0.0025 8.6E-08 61.5 10.8 58 137-199 128-187 (407)
58 2qcu_A Aerobic glycerol-3-phos 96.9 0.076 2.6E-06 52.6 19.8 57 136-195 149-211 (501)
59 1k0i_A P-hydroxybenzoate hydro 96.8 0.074 2.5E-06 50.7 18.0 61 137-199 104-169 (394)
60 3i3l_A Alkylhalidase CMLS; fla 96.6 0.019 6.7E-07 58.2 13.5 56 137-194 129-188 (591)
61 2qa2_A CABE, polyketide oxygen 96.5 0.13 4.5E-06 50.9 18.4 61 137-200 108-173 (499)
62 2dkh_A 3-hydroxybenzoate hydro 96.5 0.21 7.1E-06 51.1 20.4 63 137-200 142-218 (639)
63 2qa1_A PGAE, polyketide oxygen 96.4 0.15 5.2E-06 50.5 17.9 61 137-200 107-172 (500)
64 2i0z_A NAD(FAD)-utilizing dehy 96.4 0.008 2.7E-07 58.8 8.5 58 135-194 133-191 (447)
65 3fg2_P Putative rubredoxin red 96.3 0.011 3.8E-07 56.9 8.6 57 135-193 183-240 (404)
66 3lxd_A FAD-dependent pyridine 96.2 0.011 3.7E-07 57.2 8.4 58 135-194 193-251 (415)
67 3nlc_A Uncharacterized protein 96.2 0.01 3.6E-07 59.5 8.0 56 137-194 221-277 (549)
68 1pj5_A N,N-dimethylglycine oxi 96.2 0.011 3.8E-07 62.6 8.7 56 137-194 152-207 (830)
69 3fmw_A Oxygenase; mithramycin, 96.1 0.084 2.9E-06 53.3 14.2 61 137-200 149-214 (570)
70 2uzz_A N-methyl-L-tryptophan o 96.0 0.012 4.2E-07 55.6 7.4 55 137-194 150-204 (372)
71 2oln_A NIKD protein; flavoprot 95.8 0.016 5.4E-07 55.5 7.4 55 137-194 154-208 (397)
72 4at0_A 3-ketosteroid-delta4-5a 95.8 0.02 6.9E-07 57.0 8.1 57 137-194 203-264 (510)
73 2cdu_A NADPH oxidase; flavoenz 95.8 0.018 6.2E-07 56.3 7.6 59 134-194 189-247 (452)
74 3v76_A Flavoprotein; structura 95.7 0.02 6.9E-07 55.4 7.7 62 129-194 126-187 (417)
75 1y0p_A Fumarate reductase flav 95.7 0.025 8.5E-07 57.2 8.6 58 136-194 255-317 (571)
76 1qo8_A Flavocytochrome C3 fuma 95.5 0.025 8.5E-07 57.1 7.5 58 136-194 250-312 (566)
77 1d4d_A Flavocytochrome C fumar 95.4 0.035 1.2E-06 56.1 8.4 58 136-194 255-317 (572)
78 3iwa_A FAD-dependent pyridine 95.4 0.043 1.5E-06 53.9 8.8 58 134-193 200-257 (472)
79 2gqf_A Hypothetical protein HI 95.2 0.042 1.4E-06 52.9 7.8 57 135-194 108-168 (401)
80 3oc4_A Oxidoreductase, pyridin 95.1 0.039 1.3E-06 53.9 7.5 57 134-193 187-243 (452)
81 3g3e_A D-amino-acid oxidase; F 95.1 0.21 7.2E-06 46.6 12.2 187 137-376 143-335 (351)
82 1q1r_A Putidaredoxin reductase 95.0 0.056 1.9E-06 52.5 8.2 57 135-193 190-249 (431)
83 2cul_A Glucose-inhibited divis 95.0 0.052 1.8E-06 47.8 7.1 55 136-193 68-124 (232)
84 3ef6_A Toluene 1,2-dioxygenase 94.6 0.051 1.7E-06 52.4 6.6 56 136-194 185-241 (410)
85 3c4n_A Uncharacterized protein 94.5 0.026 8.9E-07 54.3 4.4 55 137-194 173-236 (405)
86 1xdi_A RV3303C-LPDA; reductase 94.5 0.07 2.4E-06 52.8 7.6 57 135-194 222-279 (499)
87 2v3a_A Rubredoxin reductase; a 94.5 0.076 2.6E-06 50.6 7.5 57 135-194 186-243 (384)
88 1trb_A Thioredoxin reductase; 94.4 0.089 3E-06 48.4 7.7 55 136-192 184-245 (320)
89 1mo9_A ORF3; nucleotide bindin 94.4 0.11 3.6E-06 51.9 8.6 58 135-193 254-315 (523)
90 2ywl_A Thioredoxin reductase r 94.4 0.073 2.5E-06 44.5 6.4 54 136-193 56-109 (180)
91 3o0h_A Glutathione reductase; 94.4 0.079 2.7E-06 52.2 7.5 56 135-193 231-287 (484)
92 1m6i_A Programmed cell death p 94.3 0.084 2.9E-06 52.2 7.6 55 136-193 226-281 (493)
93 1zk7_A HGII, reductase, mercur 94.3 0.11 3.9E-06 50.8 8.4 56 136-194 216-271 (467)
94 2e4g_A Tryptophan halogenase; 94.1 0.1 3.6E-06 52.3 7.9 56 137-194 195-252 (550)
95 1n4w_A CHOD, cholesterol oxida 94.1 0.078 2.7E-06 52.6 6.9 62 139-200 224-294 (504)
96 2bc0_A NADH oxidase; flavoprot 94.1 0.077 2.6E-06 52.4 6.8 57 134-193 234-290 (490)
97 2hqm_A GR, grase, glutathione 94.1 0.11 3.7E-06 51.1 7.8 58 134-192 224-283 (479)
98 1fec_A Trypanothione reductase 94.0 0.099 3.4E-06 51.6 7.4 57 135-193 230-287 (490)
99 2wpf_A Trypanothione reductase 94.0 0.11 3.7E-06 51.4 7.6 58 134-193 233-291 (495)
100 4a9w_A Monooxygenase; baeyer-v 93.9 0.1 3.5E-06 48.5 7.0 57 136-194 76-132 (357)
101 2weu_A Tryptophan 5-halogenase 93.9 0.13 4.5E-06 51.0 8.1 56 137-194 174-230 (511)
102 4dna_A Probable glutathione re 93.9 0.11 3.8E-06 50.9 7.4 57 135-194 210-268 (463)
103 2wdq_A Succinate dehydrogenase 93.9 0.11 3.8E-06 52.6 7.5 58 136-194 143-206 (588)
104 2bs2_A Quinol-fumarate reducta 93.8 0.14 4.7E-06 52.6 8.2 57 136-194 158-220 (660)
105 1pn0_A Phenol 2-monooxygenase; 93.8 3.4 0.00011 42.3 18.6 39 338-376 350-390 (665)
106 3cgb_A Pyridine nucleotide-dis 93.8 0.17 5.9E-06 49.7 8.6 57 135-194 226-282 (480)
107 2h88_A Succinate dehydrogenase 93.7 0.11 3.7E-06 53.0 7.2 58 136-195 155-218 (621)
108 2yqu_A 2-oxoglutarate dehydrog 93.7 0.14 4.6E-06 50.0 7.7 57 135-194 207-264 (455)
109 1rp0_A ARA6, thiazole biosynth 93.7 0.15 5E-06 46.4 7.4 55 137-193 120-190 (284)
110 1coy_A Cholesterol oxidase; ox 93.6 0.11 3.7E-06 51.6 6.9 60 139-199 229-298 (507)
111 1ges_A Glutathione reductase; 93.6 0.14 4.8E-06 49.9 7.5 58 134-193 206-264 (450)
112 1onf_A GR, grase, glutathione 93.2 0.19 6.4E-06 49.8 7.9 58 134-193 215-274 (500)
113 1nhp_A NADH peroxidase; oxidor 93.1 0.13 4.5E-06 50.0 6.5 57 135-194 190-246 (447)
114 2x3n_A Probable FAD-dependent 93.1 0.11 3.7E-06 49.6 5.8 62 137-200 108-173 (399)
115 1c0p_A D-amino acid oxidase; a 92.9 2.5 8.5E-05 39.3 15.0 44 136-194 142-185 (363)
116 2aqj_A Tryptophan halogenase, 92.9 0.22 7.5E-06 49.8 7.9 56 137-194 166-222 (538)
117 3lad_A Dihydrolipoamide dehydr 92.9 0.27 9.1E-06 48.2 8.4 56 135-193 220-279 (476)
118 3itj_A Thioredoxin reductase 1 92.8 0.2 6.8E-06 46.2 7.0 51 140-192 212-269 (338)
119 3ab1_A Ferredoxin--NADP reduct 92.7 0.2 6.9E-06 46.9 7.0 55 137-193 203-262 (360)
120 2r9z_A Glutathione amide reduc 92.7 0.25 8.4E-06 48.4 7.8 56 135-193 206-263 (463)
121 3nlc_A Uncharacterized protein 92.7 0.25 8.6E-06 49.4 7.9 80 289-376 463-543 (549)
122 2e5v_A L-aspartate oxidase; ar 92.6 0.19 6.4E-06 49.4 6.8 56 136-194 119-176 (472)
123 3ntd_A FAD-dependent pyridine 92.6 0.23 8E-06 49.8 7.6 58 135-193 191-266 (565)
124 4hb9_A Similarities with proba 92.5 0.76 2.6E-05 43.5 11.0 49 149-199 122-172 (412)
125 3cty_A Thioredoxin reductase; 92.4 0.28 9.7E-06 45.0 7.5 51 140-192 194-250 (319)
126 3d1c_A Flavin-containing putat 92.4 0.24 8.2E-06 46.4 7.0 55 137-194 89-143 (369)
127 2zxi_A TRNA uridine 5-carboxym 92.3 0.24 8.3E-06 50.2 7.2 56 137-195 124-181 (637)
128 1kf6_A Fumarate reductase flav 92.3 0.23 7.7E-06 50.5 7.1 57 136-194 134-197 (602)
129 2qae_A Lipoamide, dihydrolipoy 92.3 0.36 1.2E-05 47.1 8.4 56 135-193 214-275 (468)
130 2eq6_A Pyruvate dehydrogenase 92.3 0.34 1.2E-05 47.4 8.2 56 135-193 209-270 (464)
131 2pyx_A Tryptophan halogenase; 92.0 0.36 1.2E-05 48.0 8.1 56 137-194 176-233 (526)
132 2a8x_A Dihydrolipoyl dehydroge 92.0 0.42 1.4E-05 46.6 8.4 56 135-193 211-270 (464)
133 3lzw_A Ferredoxin--NADP reduct 91.9 0.29 9.9E-06 44.9 6.9 55 136-192 67-121 (332)
134 3ces_A MNMG, tRNA uridine 5-ca 91.9 0.25 8.6E-06 50.2 6.8 55 137-194 125-181 (651)
135 2gqw_A Ferredoxin reductase; f 91.9 0.35 1.2E-05 46.4 7.6 52 135-193 186-238 (408)
136 1ebd_A E3BD, dihydrolipoamide 91.8 0.37 1.3E-05 46.9 7.7 58 134-194 209-270 (455)
137 1ojt_A Surface protein; redox- 91.7 0.27 9.2E-06 48.3 6.7 57 135-194 225-286 (482)
138 1zmd_A Dihydrolipoyl dehydroge 91.7 0.38 1.3E-05 47.1 7.8 58 134-193 218-281 (474)
139 3dgh_A TRXR-1, thioredoxin red 91.7 0.35 1.2E-05 47.5 7.5 57 135-193 226-288 (483)
140 3r9u_A Thioredoxin reductase; 91.5 0.36 1.2E-05 43.9 7.0 48 143-192 190-242 (315)
141 3dk9_A Grase, GR, glutathione 91.4 0.63 2.2E-05 45.5 9.1 57 135-193 227-292 (478)
142 1chu_A Protein (L-aspartate ox 91.1 0.24 8.3E-06 49.5 5.7 57 137-194 139-208 (540)
143 2zbw_A Thioredoxin reductase; 91.1 0.63 2.1E-05 42.9 8.3 54 137-193 192-251 (335)
144 3urh_A Dihydrolipoyl dehydroge 91.1 0.57 1.9E-05 46.1 8.4 56 135-193 238-299 (491)
145 1v59_A Dihydrolipoamide dehydr 91.1 0.49 1.7E-05 46.3 7.9 56 135-193 223-286 (478)
146 3ics_A Coenzyme A-disulfide re 90.9 0.37 1.3E-05 48.6 7.0 54 135-193 227-281 (588)
147 2bry_A NEDD9 interacting prote 90.8 0.22 7.4E-06 49.3 5.0 59 137-195 167-231 (497)
148 3alj_A 2-methyl-3-hydroxypyrid 90.7 0.47 1.6E-05 44.8 7.1 58 137-200 108-167 (379)
149 4ap3_A Steroid monooxygenase; 90.4 0.45 1.6E-05 47.6 6.9 56 137-193 100-158 (549)
150 3gwf_A Cyclohexanone monooxyge 90.3 0.43 1.5E-05 47.7 6.8 56 137-193 88-146 (540)
151 1dxl_A Dihydrolipoamide dehydr 90.3 0.54 1.9E-05 45.9 7.4 57 135-194 217-279 (470)
152 3ab1_A Ferredoxin--NADP reduct 90.2 0.53 1.8E-05 44.0 6.9 55 137-193 75-130 (360)
153 2zbw_A Thioredoxin reductase; 90.1 0.55 1.9E-05 43.2 6.9 54 137-193 66-120 (335)
154 4g6h_A Rotenone-insensitive NA 90.0 0.45 1.5E-05 47.1 6.4 57 133-192 269-330 (502)
155 1jnr_A Adenylylsulfate reducta 89.8 0.63 2.1E-05 47.6 7.5 56 137-194 152-218 (643)
156 3h8l_A NADH oxidase; membrane 89.7 0.41 1.4E-05 45.7 5.8 53 135-193 217-269 (409)
157 1fl2_A Alkyl hydroperoxide red 89.5 0.59 2E-05 42.5 6.5 57 137-193 57-114 (310)
158 4b1b_A TRXR, thioredoxin reduc 89.5 0.76 2.6E-05 45.9 7.7 56 134-192 261-317 (542)
159 1vdc_A NTR, NADPH dependent th 89.2 0.55 1.9E-05 43.2 6.2 53 137-193 71-123 (333)
160 1fl2_A Alkyl hydroperoxide red 89.2 0.71 2.4E-05 41.9 6.9 50 141-192 184-240 (310)
161 2xve_A Flavin-containing monoo 89.1 0.61 2.1E-05 45.6 6.6 57 137-194 102-166 (464)
162 3dgz_A Thioredoxin reductase 2 89.0 1 3.5E-05 44.2 8.2 57 135-193 224-286 (488)
163 3fpz_A Thiazole biosynthetic e 88.8 0.27 9.4E-06 45.4 3.7 42 335-376 280-325 (326)
164 3klj_A NAD(FAD)-dependent dehy 88.7 0.54 1.8E-05 44.7 5.7 47 141-192 67-114 (385)
165 1kdg_A CDH, cellobiose dehydro 88.6 0.98 3.3E-05 45.1 7.9 60 141-202 200-269 (546)
166 3h28_A Sulfide-quinone reducta 88.6 0.27 9.4E-06 47.4 3.7 50 138-192 202-254 (430)
167 3cp8_A TRNA uridine 5-carboxym 88.6 0.65 2.2E-05 47.2 6.5 55 137-194 118-174 (641)
168 3ic9_A Dihydrolipoamide dehydr 88.4 1.4 4.8E-05 43.3 8.8 55 135-193 214-273 (492)
169 2gv8_A Monooxygenase; FMO, FAD 88.4 0.76 2.6E-05 44.5 6.8 55 137-194 116-177 (447)
170 3uox_A Otemo; baeyer-villiger 88.1 0.68 2.3E-05 46.3 6.3 56 137-193 88-146 (545)
171 3kd9_A Coenzyme A disulfide re 88.1 0.79 2.7E-05 44.4 6.7 56 134-193 188-243 (449)
172 3k30_A Histamine dehydrogenase 87.8 0.34 1.2E-05 50.0 4.0 54 138-193 569-623 (690)
173 1y56_A Hypothetical protein PH 87.8 0.6 2E-05 46.0 5.6 50 142-194 263-313 (493)
174 2q0l_A TRXR, thioredoxin reduc 87.7 1.4 4.7E-05 40.0 7.8 50 141-192 183-239 (311)
175 3s5w_A L-ornithine 5-monooxyge 87.7 1.7 5.8E-05 42.1 8.8 42 149-193 329-376 (463)
176 2vou_A 2,6-dihydroxypyridine h 87.5 0.98 3.4E-05 42.9 6.8 58 138-200 101-160 (397)
177 3gyx_A Adenylylsulfate reducta 87.2 0.8 2.7E-05 46.9 6.3 58 137-194 167-233 (662)
178 2q0l_A TRXR, thioredoxin reduc 87.1 1.1 3.9E-05 40.5 6.8 53 137-193 60-113 (311)
179 3f8d_A Thioredoxin reductase ( 86.8 0.91 3.1E-05 41.3 5.9 54 136-193 70-124 (323)
180 4gcm_A TRXR, thioredoxin reduc 86.5 1 3.5E-05 41.0 6.1 52 138-193 64-115 (312)
181 1hyu_A AHPF, alkyl hydroperoxi 86.0 1.2 4E-05 44.3 6.6 56 137-193 268-325 (521)
182 2jbv_A Choline oxidase; alcoho 86.0 0.78 2.7E-05 45.8 5.4 53 148-201 221-280 (546)
183 3jsk_A Cypbp37 protein; octame 85.9 1.8 6.2E-05 40.3 7.4 57 138-194 162-251 (344)
184 1vdc_A NTR, NADPH dependent th 85.9 1.7 5.8E-05 39.8 7.4 47 146-192 205-257 (333)
185 1w4x_A Phenylacetone monooxyge 85.9 1.3 4.3E-05 44.2 6.8 55 138-193 96-153 (542)
186 3itj_A Thioredoxin reductase 1 85.6 1.3 4.4E-05 40.6 6.4 53 137-193 85-141 (338)
187 3lzw_A Ferredoxin--NADP reduct 85.6 1.4 4.7E-05 40.2 6.5 49 141-192 194-248 (332)
188 1lvl_A Dihydrolipoamide dehydr 85.4 0.99 3.4E-05 43.9 5.7 54 135-193 211-267 (458)
189 3s5w_A L-ornithine 5-monooxyge 84.8 1.1 3.7E-05 43.5 5.7 56 137-192 128-190 (463)
190 2q7v_A Thioredoxin reductase; 84.8 2.3 8E-05 38.8 7.7 50 140-192 191-247 (325)
191 1xhc_A NADH oxidase /nitrite r 84.2 1.9 6.5E-05 40.5 6.9 52 134-193 181-233 (367)
192 3d1c_A Flavin-containing putat 84.2 1.4 4.9E-05 40.9 6.1 54 137-193 215-271 (369)
193 3cty_A Thioredoxin reductase; 84.1 1.8 6.2E-05 39.4 6.6 53 137-193 73-125 (319)
194 2gjc_A Thiazole biosynthetic e 84.0 2.6 9E-05 38.9 7.5 40 137-176 147-191 (326)
195 3sx6_A Sulfide-quinone reducta 83.8 1.5 5.3E-05 42.2 6.2 50 138-192 210-267 (437)
196 4eqs_A Coenzyme A disulfide re 83.7 1.5 5.1E-05 42.4 6.0 53 135-193 187-239 (437)
197 1trb_A Thioredoxin reductase; 83.7 2.1 7.3E-05 38.8 6.9 53 137-193 63-115 (320)
198 3hyw_A Sulfide-quinone reducta 83.6 0.67 2.3E-05 44.7 3.5 52 137-193 201-255 (430)
199 2xdo_A TETX2 protein; tetracyc 83.4 0.91 3.1E-05 43.1 4.3 52 138-194 130-182 (398)
200 3vrd_B FCCB subunit, flavocyto 83.1 0.46 1.6E-05 45.2 2.0 44 146-192 212-256 (401)
201 3c96_A Flavin-containing monoo 82.8 2.3 7.7E-05 40.5 6.9 60 137-200 108-176 (410)
202 3f8d_A Thioredoxin reductase ( 82.8 2.9 9.8E-05 37.8 7.4 48 142-192 195-249 (323)
203 3r9u_A Thioredoxin reductase; 82.6 2.1 7E-05 38.7 6.3 54 136-192 62-116 (315)
204 4fk1_A Putative thioredoxin re 82.2 1.4 4.9E-05 39.9 5.0 41 334-376 260-300 (304)
205 3pl8_A Pyranose 2-oxidase; sub 82.2 1.8 6E-05 44.1 6.1 53 149-201 273-331 (623)
206 3ces_A MNMG, tRNA uridine 5-ca 82.1 3.8 0.00013 41.6 8.4 58 332-396 377-435 (651)
207 2cul_A Glucose-inhibited divis 81.3 1.5 5E-05 38.2 4.6 36 336-375 196-231 (232)
208 3fbs_A Oxidoreductase; structu 81.3 1.9 6.4E-05 38.6 5.4 53 137-193 57-111 (297)
209 3qvp_A Glucose oxidase; oxidor 81.1 3.1 0.0001 41.9 7.3 56 147-202 238-301 (583)
210 2q7v_A Thioredoxin reductase; 80.9 2.9 9.8E-05 38.1 6.6 55 137-193 66-122 (325)
211 4a5l_A Thioredoxin reductase; 80.8 1.8 6E-05 39.3 5.1 54 137-193 67-120 (314)
212 2a87_A TRXR, TR, thioredoxin r 79.6 2.5 8.6E-05 38.8 5.8 52 137-193 72-125 (335)
213 1xhc_A NADH oxidase /nitrite r 79.3 2.4 8.4E-05 39.7 5.7 45 144-193 68-112 (367)
214 1hyu_A AHPF, alkyl hydroperoxi 78.7 3.2 0.00011 41.0 6.6 49 141-191 395-450 (521)
215 1ju2_A HydroxynitrIle lyase; f 78.6 2.6 9E-05 41.9 5.9 56 146-201 204-268 (536)
216 1cjc_A Protein (adrenodoxin re 78.0 3.7 0.00012 39.9 6.6 43 149-192 270-331 (460)
217 2zxi_A TRNA uridine 5-carboxym 77.9 6.3 0.00022 39.9 8.4 53 337-396 388-440 (637)
218 1ps9_A 2,4-dienoyl-COA reducta 77.8 5.7 0.00019 40.6 8.3 51 138-193 575-627 (671)
219 3q9t_A Choline dehydrogenase a 77.7 2.8 9.7E-05 42.1 5.8 54 148-201 218-277 (577)
220 3qfa_A Thioredoxin reductase 1 77.3 5.7 0.0002 39.1 7.9 59 134-193 248-314 (519)
221 3fbs_A Oxidoreductase; structu 76.9 3.8 0.00013 36.5 6.0 40 334-376 253-292 (297)
222 4fk1_A Putative thioredoxin re 75.8 4.1 0.00014 36.8 6.0 54 138-193 62-116 (304)
223 1q1r_A Putidaredoxin reductase 75.4 3.4 0.00012 39.7 5.5 45 144-193 68-113 (431)
224 4a9w_A Monooxygenase; baeyer-v 75.3 3.3 0.00011 37.9 5.3 41 334-376 310-352 (357)
225 2r0c_A REBC; flavin adenine di 75.2 5.7 0.0002 39.5 7.3 57 138-200 140-203 (549)
226 2ywl_A Thioredoxin reductase r 74.9 4.6 0.00016 33.1 5.6 40 335-376 132-171 (180)
227 3fim_B ARYL-alcohol oxidase; A 74.8 2.3 7.9E-05 42.6 4.3 56 147-202 219-284 (566)
228 1gpe_A Protein (glucose oxidas 74.2 3.7 0.00013 41.3 5.6 55 147-201 242-304 (587)
229 2a87_A TRXR, TR, thioredoxin r 72.7 4.2 0.00014 37.3 5.2 40 335-376 277-316 (335)
230 2gag_A Heterotetrameric sarcos 72.7 4.7 0.00016 43.2 6.2 49 143-192 323-381 (965)
231 3ef6_A Toluene 1,2-dioxygenase 72.6 3.6 0.00012 39.1 4.9 44 145-193 66-110 (410)
232 2v3a_A Rubredoxin reductase; a 71.8 6.2 0.00021 37.0 6.3 45 144-193 68-112 (384)
233 3t37_A Probable dehydrogenase; 71.8 5.3 0.00018 39.3 6.1 51 149-201 224-278 (526)
234 3l8k_A Dihydrolipoyl dehydroge 71.4 6 0.00021 38.3 6.3 53 136-193 214-271 (466)
235 1o94_A Tmadh, trimethylamine d 69.0 3.7 0.00013 42.5 4.3 49 140-193 575-645 (729)
236 3hyw_A Sulfide-quinone reducta 68.9 4.3 0.00015 38.9 4.5 43 145-193 65-108 (430)
237 2vdc_G Glutamate synthase [NAD 68.6 5.6 0.00019 38.5 5.3 40 334-376 405-444 (456)
238 1gte_A Dihydropyrimidine dehyd 67.8 13 0.00043 40.2 8.3 48 143-192 377-440 (1025)
239 2x8g_A Thioredoxin glutathione 66.1 15 0.00052 36.8 8.1 59 135-194 325-395 (598)
240 3g5s_A Methylenetetrahydrofola 65.2 7.5 0.00026 37.1 5.1 36 337-376 327-362 (443)
241 2gqw_A Ferredoxin reductase; f 64.6 4.8 0.00017 38.2 3.9 42 147-193 70-112 (408)
242 3lxd_A FAD-dependent pyridine 64.6 6.6 0.00022 37.3 4.9 46 142-192 71-117 (415)
243 3h8l_A NADH oxidase; membrane 63.9 11 0.00038 35.5 6.3 40 337-377 298-337 (409)
244 3ics_A Coenzyme A-disulfide re 63.3 13 0.00044 37.1 7.0 50 140-192 97-150 (588)
245 2gqf_A Hypothetical protein HI 62.9 5.2 0.00018 38.0 3.7 36 336-372 361-399 (401)
246 3oc4_A Oxidoreductase, pyridin 62.6 6.6 0.00023 37.8 4.5 46 144-192 66-113 (452)
247 3cp8_A TRNA uridine 5-carboxym 62.6 8.2 0.00028 39.1 5.3 53 337-396 377-429 (641)
248 4b63_A L-ornithine N5 monooxyg 62.5 12 0.00039 36.8 6.3 56 137-192 146-212 (501)
249 2i0z_A NAD(FAD)-utilizing dehy 62.3 7.2 0.00025 37.5 4.7 40 336-376 402-444 (447)
250 2vdc_G Glutamate synthase [NAD 62.0 4.8 0.00016 39.1 3.3 48 143-193 309-377 (456)
251 2bc0_A NADH oxidase; flavoprot 61.5 7.3 0.00025 38.0 4.6 47 144-193 100-148 (490)
252 2cdu_A NADPH oxidase; flavoenz 61.4 14 0.00046 35.5 6.5 47 144-193 66-116 (452)
253 3ntd_A FAD-dependent pyridine 61.2 12 0.00042 37.0 6.3 44 146-192 68-115 (565)
254 4eqs_A Coenzyme A disulfide re 61.2 9.3 0.00032 36.7 5.2 46 145-193 66-115 (437)
255 1lqt_A FPRA; NADP+ derivative, 61.1 8.3 0.00028 37.3 4.9 50 140-192 250-324 (456)
256 3v76_A Flavoprotein; structura 61.1 4.5 0.00015 38.8 2.9 34 336-370 380-416 (417)
257 1nhp_A NADH peroxidase; oxidor 60.5 13 0.00045 35.6 6.2 47 144-193 64-114 (447)
258 1m6i_A Programmed cell death p 59.2 5.5 0.00019 39.0 3.3 41 148-193 102-143 (493)
259 3sx6_A Sulfide-quinone reducta 59.1 9.6 0.00033 36.5 4.9 51 138-194 61-112 (437)
260 3cgb_A Pyridine nucleotide-dis 59.1 9.3 0.00032 37.1 4.9 43 148-193 105-151 (480)
261 4a5l_A Thioredoxin reductase; 58.6 18 0.0006 32.4 6.5 41 334-376 272-312 (314)
262 1ebd_A E3BD, dihydrolipoamide 58.3 16 0.00056 35.0 6.5 50 138-193 93-144 (455)
263 4dna_A Probable glutathione re 55.5 17 0.00059 35.0 6.1 38 334-374 294-331 (463)
264 3iwa_A FAD-dependent pyridine 55.3 15 0.00051 35.5 5.6 42 148-192 78-123 (472)
265 3fg2_P Putative rubredoxin red 55.2 15 0.00051 34.6 5.5 45 142-192 63-108 (404)
266 3o0h_A Glutathione reductase; 52.9 20 0.0007 34.7 6.2 38 334-374 314-351 (484)
267 3l8k_A Dihydrolipoyl dehydroge 52.8 18 0.0006 34.9 5.7 38 334-374 296-333 (466)
268 2a8x_A Dihydrolipoyl dehydroge 52.3 19 0.00066 34.6 5.9 50 138-193 93-145 (464)
269 3uox_A Otemo; baeyer-villiger 51.9 11 0.00039 37.3 4.2 46 143-195 345-392 (545)
270 1chu_A Protein (L-aspartate ox 51.9 11 0.00039 37.3 4.2 43 334-376 363-411 (540)
271 3vrd_B FCCB subunit, flavocyto 51.5 16 0.00056 34.2 5.1 39 336-375 284-323 (401)
272 3dgz_A Thioredoxin reductase 2 51.1 23 0.00077 34.4 6.2 39 334-374 314-352 (488)
273 3ic9_A Dihydrolipoamide dehydr 50.6 17 0.00058 35.4 5.2 38 334-374 301-338 (492)
274 3kd9_A Coenzyme A disulfide re 50.5 17 0.00057 34.9 5.1 42 147-193 70-113 (449)
275 3klj_A NAD(FAD)-dependent dehy 50.4 13 0.00044 35.0 4.2 41 334-374 253-294 (385)
276 3dk9_A Grase, GR, glutathione 50.4 21 0.00071 34.5 5.8 38 334-374 319-356 (478)
277 3dgh_A TRXR-1, thioredoxin red 50.2 22 0.00076 34.3 6.0 39 334-374 314-352 (483)
278 3lad_A Dihydrolipoamide dehydr 49.2 23 0.00079 34.1 5.9 39 334-375 306-344 (476)
279 2gjc_A Thiazole biosynthetic e 48.2 14 0.00048 33.9 3.9 40 337-376 282-325 (326)
280 1y56_A Hypothetical protein PH 48.0 16 0.00056 35.6 4.6 37 337-377 342-378 (493)
281 4gcm_A TRXR, thioredoxin reduc 47.9 30 0.001 30.9 6.2 42 333-376 265-306 (312)
282 3gwf_A Cyclohexanone monooxyge 47.7 8.4 0.00029 38.2 2.4 43 146-195 340-385 (540)
283 1dxl_A Dihydrolipoamide dehydr 47.6 26 0.00088 33.7 5.9 38 334-374 305-342 (470)
284 3qfa_A Thioredoxin reductase 1 46.9 28 0.00094 34.1 6.1 39 334-374 342-380 (519)
285 3urh_A Dihydrolipoyl dehydroge 46.7 22 0.00075 34.5 5.3 39 334-375 326-364 (491)
286 3h28_A Sulfide-quinone reducta 45.6 40 0.0014 31.9 6.9 45 143-193 63-108 (430)
287 1ojt_A Surface protein; redox- 45.0 28 0.00097 33.6 5.8 37 334-373 312-348 (482)
288 1v59_A Dihydrolipoamide dehydr 44.8 30 0.001 33.3 5.9 38 334-374 313-350 (478)
289 2hqm_A GR, grase, glutathione 44.1 29 0.001 33.5 5.7 38 334-374 310-347 (479)
290 2x8g_A Thioredoxin glutathione 43.5 31 0.0011 34.4 6.0 39 334-374 421-459 (598)
291 1lvl_A Dihydrolipoamide dehydr 43.0 53 0.0018 31.4 7.4 37 334-373 293-329 (458)
292 1ges_A Glutathione reductase; 42.4 32 0.0011 32.9 5.7 38 334-374 291-328 (450)
293 2qae_A Lipoamide, dihydrolipoy 41.9 35 0.0012 32.8 5.9 38 334-374 302-340 (468)
294 1zmd_A Dihydrolipoyl dehydroge 40.7 32 0.0011 33.1 5.3 38 334-374 308-345 (474)
295 1lqt_A FPRA; NADP+ derivative, 40.6 19 0.00065 34.7 3.7 39 336-376 349-387 (456)
296 2r9z_A Glutathione amide reduc 39.8 38 0.0013 32.5 5.8 36 335-373 291-326 (463)
297 1gte_A Dihydropyrimidine dehyd 39.7 28 0.00096 37.5 5.2 39 334-375 469-507 (1025)
298 1fec_A Trypanothione reductase 39.6 39 0.0013 32.8 5.8 37 334-373 314-350 (490)
299 2wpf_A Trypanothione reductase 39.4 39 0.0013 32.8 5.8 37 334-373 318-354 (495)
300 1kf6_A Fumarate reductase flav 39.3 24 0.00081 35.5 4.3 42 334-375 368-415 (602)
301 2eq6_A Pyruvate dehydrogenase 38.5 35 0.0012 32.8 5.2 37 334-373 297-333 (464)
302 2yqu_A 2-oxoglutarate dehydrog 37.9 45 0.0016 31.8 6.0 37 335-374 291-327 (455)
303 1zk7_A HGII, reductase, mercur 37.5 37 0.0012 32.6 5.2 38 334-374 297-334 (467)
304 1xdi_A RV3303C-LPDA; reductase 37.2 36 0.0012 33.1 5.1 38 334-374 305-342 (499)
305 3jsk_A Cypbp37 protein; octame 37.0 18 0.00062 33.5 2.7 39 338-376 293-335 (344)
306 1mo9_A ORF3; nucleotide bindin 36.2 38 0.0013 33.1 5.2 37 334-373 341-377 (523)
307 1qo8_A Flavocytochrome C3 fuma 35.6 22 0.00076 35.3 3.4 41 336-376 519-564 (566)
308 1rp0_A ARA6, thiazole biosynth 35.4 27 0.00091 31.0 3.6 40 337-377 232-276 (284)
309 2gag_A Heterotetrameric sarcos 35.0 37 0.0013 36.2 5.1 38 336-377 408-445 (965)
310 1cjc_A Protein (adrenodoxin re 34.8 26 0.0009 33.8 3.7 38 338-377 359-396 (460)
311 4ap3_A Steroid monooxygenase; 34.1 25 0.00085 34.9 3.4 43 146-195 353-397 (549)
312 2r0c_A REBC; flavin adenine di 32.7 25 0.00085 34.8 3.1 38 338-375 308-347 (549)
313 1d4d_A Flavocytochrome C fumar 32.3 23 0.00079 35.2 2.9 40 336-375 525-569 (572)
314 2bs2_A Quinol-fumarate reducta 31.7 37 0.0013 34.5 4.3 42 334-375 381-428 (660)
315 1y0p_A Fumarate reductase flav 31.7 24 0.00083 35.0 2.9 40 336-375 524-568 (571)
316 2x3n_A Probable FAD-dependent 31.3 41 0.0014 31.2 4.3 38 339-376 286-325 (399)
317 4b1b_A TRXR, thioredoxin reduc 31.1 51 0.0018 32.5 5.1 57 334-392 346-406 (542)
318 3k30_A Histamine dehydrogenase 29.9 23 0.0008 36.1 2.4 37 336-376 639-675 (690)
319 1jnr_A Adenylylsulfate reducta 29.8 49 0.0017 33.4 4.8 40 335-375 428-467 (643)
320 3c4a_A Probable tryptophan hyd 29.3 45 0.0015 30.9 4.2 46 137-195 99-144 (381)
321 4at0_A 3-ketosteroid-delta4-5a 28.4 26 0.00089 34.2 2.4 38 336-373 466-508 (510)
322 3c4a_A Probable tryptophan hyd 28.3 23 0.00079 32.9 1.9 35 339-373 262-298 (381)
323 3c96_A Flavin-containing monoo 28.2 44 0.0015 31.3 3.9 35 339-373 303-339 (410)
324 2h88_A Succinate dehydrogenase 27.7 56 0.0019 32.9 4.8 41 336-376 387-433 (621)
325 3gyx_A Adenylylsulfate reducta 26.4 50 0.0017 33.5 4.2 42 334-376 448-489 (662)
326 4fay_A Microcompartments prote 26.4 86 0.0029 27.4 5.0 37 334-377 208-247 (258)
327 2xdo_A TETX2 protein; tetracyc 26.4 42 0.0014 31.2 3.5 34 340-373 315-350 (398)
328 2vou_A 2,6-dihydroxypyridine h 26.2 54 0.0019 30.5 4.2 35 339-373 299-335 (397)
329 1onf_A GR, grase, glutathione 25.7 68 0.0023 31.1 4.9 49 139-193 92-152 (500)
330 1pzq_A Erythronolide synthase; 25.3 46 0.0016 20.6 2.2 18 396-413 37-54 (60)
331 1w4x_A Phenylacetone monooxyge 24.6 63 0.0021 31.7 4.5 44 144-194 346-391 (542)
332 4g6h_A Rotenone-insensitive NA 24.6 74 0.0025 30.9 4.9 37 337-374 363-399 (502)
333 3ihm_A Styrene monooxygenase A 23.9 67 0.0023 30.4 4.4 37 338-374 306-345 (430)
334 3alj_A 2-methyl-3-hydroxypyrid 22.6 42 0.0015 31.0 2.6 34 339-372 281-316 (379)
335 1o94_A Tmadh, trimethylamine d 22.3 34 0.0012 35.2 2.0 37 336-376 664-700 (729)
336 2uzz_A N-methyl-L-tryptophan o 21.8 43 0.0015 30.6 2.4 73 287-374 283-357 (372)
337 2e5v_A L-aspartate oxidase; ar 20.7 41 0.0014 32.4 2.1 42 333-374 324-371 (472)
338 2wdq_A Succinate dehydrogenase 20.4 40 0.0014 33.7 2.0 39 337-375 379-423 (588)
No 1
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=100.00 E-value=5.6e-30 Score=253.01 Aligned_cols=312 Identities=12% Similarity=0.078 Sum_probs=231.7
Q ss_pred CCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHH
Q 014807 38 RLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI 117 (418)
Q Consensus 38 ~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~ 117 (418)
.+++.+|.++...+..+.. ...+++|+.+|++++ ++++.++.++++++.+.++.+++++|+..++..+...
T Consensus 112 ~~~~~~~~~~~~~~~~~~~--------~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 182 (425)
T 3ka7_A 112 LLSYKDRMKIALLIVSTRK--------NRPSGSSLQAWIKSQ-VSDEWLIKFADSFCGWALSLKSDEVPVEEVFEIIENM 182 (425)
T ss_dssp GSCHHHHHHHHHHHHHTTT--------SCCCSSBHHHHHHHH-CCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHhhhh--------cCCCCCCHHHHHHHh-cCCHHHHHHHHHHHHHHhCCCcccchHHHHHHHHHHH
Confidence 4678888777664433110 124689999999997 5566688999999999999999999999888877764
Q ss_pred HhhcCCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHH
Q 014807 118 ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 197 (418)
Q Consensus 118 ~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~ 197 (418)
.... ...++.||+ +.|+++|++.++++|++|++|++|++|..++ +++++|+++|+++.||.||+|+|++.+.+
T Consensus 183 ~~~~----~~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~~gv~~~g~~~~ad~VV~a~~~~~~~~ 255 (425)
T 3ka7_A 183 YRFG----GTGIPEGGC-KGIIDALETVISANGGKIHTGQEVSKILIEN--GKAAGIIADDRIHDADLVISNLGHAATAV 255 (425)
T ss_dssp HHHC----SCEEETTSH-HHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECSCHHHHHH
T ss_pred HhcC----CccccCCCH-HHHHHHHHHHHHHcCCEEEECCceeEEEEEC--CEEEEEEECCEEEECCEEEECCCHHHHHH
Confidence 3221 136789997 5699999999999999999999999999887 67878888999999999999999999999
Q ss_pred hhcccccC--ChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEee
Q 014807 198 LIKNSILC--NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFY 275 (418)
Q Consensus 198 Ll~~~~~~--~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~ 275 (418)
|+++.... +..+.+.++.+++.+.++++++++++.. . .++.+++.+......+...|...+...+++++++.+.++
T Consensus 256 ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~-~-~~~~~~~~~~~~~~~~~~~s~~~p~~ap~G~~~l~~~~~ 333 (425)
T 3ka7_A 256 LCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPLV-G-HTGVLLTPYTRRINGVNEVTQADPELAPPGKHLTMCHQY 333 (425)
T ss_dssp HTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCSS-C-SSSEEECCSSSSEEEEECGGGTCGGGSCTTCEEEEEEEE
T ss_pred hcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCcc-C-cCEEEECCChhhcceEEeccCCCCCcCCCCCeEEEEEec
Confidence 98753211 2456677888888888899999998764 2 233343322211111334455566677677888776555
Q ss_pred cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCCCCCCCEEEeccccccCCCcc
Q 014807 276 HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSW 355 (418)
Q Consensus 276 ~~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~~~~~~l~laGd~~~~~~g~~ 355 (418)
...+..+. ++++++.++++|++++|+.. .....+.+|+.++|++.+|+. .++...+|++|||+||||+.+..| .
T Consensus 334 ~~~~~~~~-~~~~~~~~~~~l~~~~p~~~---~~~~~v~~~~~~~P~~~~~~~-~~~~~~~p~~gL~laG~~~~~~gg-~ 407 (425)
T 3ka7_A 334 VAPENVKN-LESEIEMGLEDLKEIFPGKR---YEVLLIQSYHDEWPVNRAASG-TDPGNETPFSGLYVVGDGAKGKGG-I 407 (425)
T ss_dssp ECGGGGGG-HHHHHHHHHHHHHHHSTTCC---EEEEEEEEEBTTBCSBSSCTT-CCCCSBCSSBTEEECSTTSCCTTC-C
T ss_pred cccccccc-hHHHHHHHHHHHHHhCCCCc---eEEEEEEEECCCccccccccC-CCCCCCCCcCCeEEeCCccCCCCC-C
Confidence 33222222 34567999999999999843 333477889999999999864 457777899999999999754445 5
Q ss_pred chHHHHHHHHHHHHHHHH
Q 014807 356 SQERSYVTGLEAANRVVD 373 (418)
Q Consensus 356 ~~egAi~SG~~aA~~Il~ 373 (418)
+|++|+.||++||++|+.
T Consensus 408 gv~~~~~s~~~~~~~i~~ 425 (425)
T 3ka7_A 408 EVEGVALGVMSVMEKVLG 425 (425)
T ss_dssp HHHHHHHHHHHHHHC---
T ss_pred ccHHHHHHHHHHHHHhhC
Confidence 899999999999999873
No 2
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.96 E-value=4.6e-26 Score=224.77 Aligned_cols=302 Identities=12% Similarity=0.077 Sum_probs=204.0
Q ss_pred CCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHH
Q 014807 38 RLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI 117 (418)
Q Consensus 38 ~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~ 117 (418)
.+++.+|.++...+...... ....+++|+.+|+++++++++.++.++.+++.++++.+++++|+..++..+...
T Consensus 102 ~l~~~~~~~~~~~~~~~~~~------~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (421)
T 3nrn_A 102 FLSVKEKAKALKLLAEIRMN------KLPKEEIPADEWIKEKIGENEFLLSVLESFAGWADSVSLSDLTALELAKEIRAA 175 (421)
T ss_dssp GCC--------CCHHHHHTT------CCCCCCSBHHHHHHHHTCCCHHHHHHHHHHHHHHHSSCGGGSBHHHHHHHHHHH
T ss_pred hCCHhHHHHHHHHHHHHHhc------cCCCCCCCHHHHHHHhcCCcHHHHHHHHHHHHHhcCCCcccCCHHHHHHHHHHH
Confidence 36777777776655432210 112356999999999867777788999999999999999999999888877765
Q ss_pred HhhcCCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHH
Q 014807 118 ILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQE 197 (418)
Q Consensus 118 ~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~ 197 (418)
.. .. ...++.||+ ..|+++|++.++++|++|++|++|++|..++ +++ |.++|+++.||+||+|+|++.+.+
T Consensus 176 ~~-~~---g~~~~~gG~-~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~v--V~~~g~~~~ad~Vv~a~~~~~~~~ 246 (421)
T 3nrn_A 176 LR-WG---GPGLIRGGC-KAVIDELERIIMENKGKILTRKEVVEINIEE--KKV--YTRDNEEYSFDVAISNVGVRETVK 246 (421)
T ss_dssp HH-HC---SCEEETTCH-HHHHHHHHHHHHTTTCEEESSCCEEEEETTT--TEE--EETTCCEEECSEEEECSCHHHHHH
T ss_pred hh-cC---CcceecCCH-HHHHHHHHHHHHHCCCEEEcCCeEEEEEEEC--CEE--EEeCCcEEEeCEEEECCCHHHHHH
Confidence 32 11 136789996 5799999999999999999999999999876 655 666888999999999999999999
Q ss_pred hhcccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEeecC
Q 014807 198 LIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA 277 (418)
Q Consensus 198 Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~ 277 (418)
|++...+ +..+.+.+..+.+.++.+++++++++.. . .++.+++.+... ..+...+...+...+++++++.+..+..
T Consensus 247 ll~~~~~-~~~~~~~~~~~~~~~~~~v~l~~~~~~~-~-~~~~~~~~~~~~-~~i~~~s~~~p~~ap~G~~~~~~~~~~~ 322 (421)
T 3nrn_A 247 LIGRDYF-DRDYLKQVDSIEPSEGIKFNLAVPGEPR-I-GNTIVFTPGLMI-NGFNEPSALDKSLAREGYTLIMAHMALK 322 (421)
T ss_dssp HHCGGGS-CHHHHHHHHTCCCCCEEEEEEEEESSCS-S-CSSEEECTTSSS-CEEECGGGTCGGGSCTTEEEEEEEEECT
T ss_pred hcCcccC-CHHHHHHHhCCCCCceEEEEEEEcCCcc-c-CCeEEEcCCcce-eeEeccCCCCCCcCCCCceEEEEEEeec
Confidence 9974333 2455667888888888999999988743 2 233344333221 1123334445555655667766654422
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCCCCCCCEEEeccccccCCCccch
Q 014807 278 NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQ 357 (418)
Q Consensus 278 ~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~~~~~~l~laGd~~~~~~g~~~~ 357 (418)
..++++.++.++++|++++| . .+++ .+.+|+.++|++.+..... +. .++ +|||+||||+....+ .+|
T Consensus 323 ----~~~~~~~~~~~~~~L~~~~p--~-~~~~--~~~~~~~~~p~~~~~~~~~-~~-~~~-~gl~laGd~~~~~~g-~~~ 389 (421)
T 3nrn_A 323 ----NGNVKKAIEKGWEELLEIFP--E-GEPL--LAQVYRDGNPVNRTRAGLH-IE-WPL-NEVLVVGDGYRPPGG-IEV 389 (421)
T ss_dssp ----TCCHHHHHHHHHHHHHHHCT--T-CEEE--EEEEC-------------C-CC-CCC-SSEEECSTTCCCTTC-CHH
T ss_pred ----cccHHHHHHHHHHHHHHHcC--C-CeEE--EeeeccCCCCcccccCCCC-CC-CCC-CcEEEECCcccCCCc-eee
Confidence 23445668999999999999 2 2443 4567888888874332112 22 567 999999999742212 266
Q ss_pred HHHHHHHHHHHHHH
Q 014807 358 ERSYVTGLEAANRV 371 (418)
Q Consensus 358 egAi~SG~~aA~~I 371 (418)
|+|+.||++||++|
T Consensus 390 ~ga~~sg~~aA~~l 403 (421)
T 3nrn_A 390 DGIALGVMKALEKL 403 (421)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred ehHHHHHHHHHHHh
Confidence 99999999999999
No 3
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.95 E-value=4.6e-27 Score=235.60 Aligned_cols=294 Identities=12% Similarity=0.082 Sum_probs=216.4
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhh----------c---------------
Q 014807 67 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILA----------H--------------- 121 (418)
Q Consensus 67 ~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~----------~--------------- 121 (418)
.+++|+.+|+++ ++++++.+.+++|++.++|+.+++++|+..+++.+...... .
T Consensus 141 ~~~~s~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~l~~~e~~~gsl~~~~~~~~~~~~~~~~~~~~~~ 219 (477)
T 3nks_A 141 EPDETVHSFAQR-RLGPEVASLAMDSLCRGVFAGNSRELSIRSCFPSLFQAEQTHRSILLGLLLGAGRTPQPDSALIRQA 219 (477)
T ss_dssp SSCCBHHHHHHH-HHCHHHHHHTHHHHHHHHHSSCTTTBBHHHHCHHHHHHHHHHSCHHHHHHHC-----CCCCHHHHHH
T ss_pred CCCcCHHHHHHH-hhCHHHHHHHHHHHhcccccCCHHHhhHHHHHHHHHHHHHHcCCHHHHHHHhcccccCCchhhhhhh
Confidence 578999999998 48889999999999999999999999999887765442100 0
Q ss_pred -CCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhc
Q 014807 122 -QKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIK 200 (418)
Q Consensus 122 -~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~ 200 (418)
.....+.+++||++ .|+++|++.+++.|++|++|++|++|..++ ++++.|+++++++.||+||+|+|++.+.+|++
T Consensus 220 ~~~~~~~~~~~gG~~-~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~--~~~~~v~~~~~~~~ad~vv~a~p~~~~~~ll~ 296 (477)
T 3nks_A 220 LAERWSQWSLRGGLE-MLPQALETHLTSRGVSVLRGQPVCGLSLQA--EGRWKVSLRDSSLEADHVISAIPASVLSELLP 296 (477)
T ss_dssp HHTTCSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEECG--GGCEEEECSSCEEEESEEEECSCHHHHHHHSC
T ss_pred cccCccEEEECCCHH-HHHHHHHHHHHhcCCEEEeCCEEEEEEEcC--CceEEEEECCeEEEcCEEEECCCHHHHHHhcc
Confidence 01123467899985 699999999999999999999999999876 33346777888899999999999999999987
Q ss_pred ccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCC---CccceeeeccccccccCCCCCeEEEEEeecC
Q 014807 201 NSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD---SLAWTFFDLNKIYDEHKDDSATVIQADFYHA 277 (418)
Q Consensus 201 ~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~ 277 (418)
+.. ++..+.+..+.+.++.++++.|+++.+....++.+..... ..++ +|+.+..+....+++..++.+.+.+.
T Consensus 297 ~~~---~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~g~l~~~~~~~~~~~~-~~~s~~~~~~~~~~~~~~l~~~~gg~ 372 (477)
T 3nks_A 297 AEA---APLARALSAITAVSVAVVNLQYQGAHLPVQGFGHLVPSSEDPGVLGI-VYDSVAFPEQDGSPPGLRVTVMLGGS 372 (477)
T ss_dssp GGG---HHHHHHHHTCCEEEEEEEEEEETTCCCSSCSSEEECCTTTCSSEEEE-ECHHHHCGGGSTTTTCEEEEEEECHH
T ss_pred ccC---HHHHHHHhcCCCCcEEEEEEEECCCCCCCCCceEEccCCCCCCceEE-EEeccccCCCCCCCCceEEEEEECCc
Confidence 642 4556778889999999999999987653223222221111 1233 46544333222223566665544321
Q ss_pred ------CCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC----CCCCCCEEEeccc
Q 014807 278 ------NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG----FTSFPNLFMAGDW 347 (418)
Q Consensus 278 ------~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~----~~~~~~l~laGd~ 347 (418)
....+++++++++.++++|+++++... .+....+++|++++|+|.+|+...+... ....+|||+||||
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~--~~~~~~v~rw~~a~p~~~~g~~~~~~~~~~~l~~~~~~l~l~G~~ 450 (477)
T 3nks_A 373 WLQTLEASGCVLSQELFQQRAQEAAATQLGLKE--MPSHCLVHLHKNCIPQYTLGHWQKLESARQFLTAHRLPLTLAGAS 450 (477)
T ss_dssp HHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCS--CCSEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHTTCSEEECSTT
T ss_pred cccccccccCCCCHHHHHHHHHHHHHHHhCCCC--CCcEEEEEEcCCccCCCCCCHHHHHHHHHHHHHhcCCCEEEEccC
Confidence 111246899999999999999997642 5677789999999999999976432111 1224689999999
Q ss_pred cccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 348 ITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 348 ~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
+ .| .+|++|+.||+.||++|+++
T Consensus 451 ~---~G-~gv~~a~~sg~~aA~~il~~ 473 (477)
T 3nks_A 451 Y---EG-VAVNDCIESGRQAAVSVLGT 473 (477)
T ss_dssp T---SC-CSHHHHHHHHHHHHHHHHHC
T ss_pred C---CC-CcHHHHHHHHHHHHHHHHhc
Confidence 5 34 37999999999999999875
No 4
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.95 E-value=5.9e-26 Score=230.08 Aligned_cols=307 Identities=17% Similarity=0.135 Sum_probs=214.2
Q ss_pred hcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHH-----HhhcCCCcceeeecCCcchhhHH
Q 014807 66 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKIFE 140 (418)
Q Consensus 66 ~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~-----~~~~~~~~~~~~~~gG~~~~l~~ 140 (418)
.++++|+.+|+++++.++. .+.++++++.+.++.+++++|+..++..+... +.....+....++.||++ .|++
T Consensus 142 ~~~~~s~~~~l~~~~~~~~-~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~-~l~~ 219 (520)
T 1s3e_A 142 EWDNMTMKELLDKLCWTES-AKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSG-QVSE 219 (520)
T ss_dssp HHHTSBHHHHHHHHCSSHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTH-HHHH
T ss_pred hhhccCHHHHHHhhCCCHH-HHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHH-HHHH
Confidence 3678999999999877765 68899999999999999999998876655321 011111223356889974 6999
Q ss_pred HHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCc
Q 014807 141 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASI 219 (418)
Q Consensus 141 ~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~ 219 (418)
+|++.+ |++|++|++|++|..++ +++. |++ +|+++.||+||+|+|+..+.+++..+.++ ....+.++.+++.
T Consensus 220 ~l~~~l---g~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~VI~a~p~~~l~~l~~~p~lp-~~~~~~i~~~~~~ 292 (520)
T 1s3e_A 220 RIMDLL---GDRVKLERPVIYIDQTR--ENVL-VETLNHEMYEAKYVISAIPPTLGMKIHFNPPLP-MMRNQMITRVPLG 292 (520)
T ss_dssp HHHHHH---GGGEESSCCEEEEECSS--SSEE-EEETTSCEEEESEEEECSCGGGGGGSEEESCCC-HHHHHHTTSCCBC
T ss_pred HHHHHc---CCcEEcCCeeEEEEECC--CeEE-EEECCCeEEEeCEEEECCCHHHHcceeeCCCCC-HHHHHHHHhCCCc
Confidence 998766 68999999999999876 4465 666 57789999999999999998887554442 4455678889999
Q ss_pred cEEEEEEEeccCCCCCCCCcce-e--ccCCCccceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHHH
Q 014807 220 DVVSVKLWFDKKVTVPNVSNAC-S--GFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVS 294 (418)
Q Consensus 220 ~~~~v~l~~~~~~~~~~~~~~~-~--~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~~ 294 (418)
++.++++.|+++++....+... . .......+ ++|.+. .+.+..++...+.+ +..|.+++++++.+.+++
T Consensus 293 ~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~~~-~~d~~~-----~~~~~~~l~~~~~~~~a~~~~~~~~~e~~~~vl~ 366 (520)
T 1s3e_A 293 SVIKCIVYYKEPFWRKKDYCGTMIIDGEEAPVAY-TLDDTK-----PEGNYAAIMGFILAHKARKLARLTKEERLKKLCE 366 (520)
T ss_dssp CEEEEEEECSSCGGGGGTEEEEEEECSTTCSCSE-EEECCC-----TTSCSCEEEEEEETHHHHHHTTSCHHHHHHHHHH
T ss_pred ceEEEEEEeCCCcccCCCCCceeeccCCCCceEE-EeeCCC-----CCCCCCEEEEEccchhhhhhhcCCHHHHHHHHHH
Confidence 9999999999887632221111 1 11112222 344332 11122444433322 235677899999999999
Q ss_pred HHhhhhcCCCCceeeeeeEEEcCCCc-------cccCCCCCC-CCCCCCCCCCCEEEeccccccCCCccchHHHHHHHHH
Q 014807 295 YLSKCIKDFSTATVMDHKIRRFPKSL-------THFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 366 (418)
Q Consensus 295 ~L~~~~p~~~~~~~~~~~v~r~~~a~-------~~~~pg~~~-~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~ 366 (418)
+|+++||.....++....+.+|.... +.+.||+.. .++...++++||||||+++.+.++ ++|+||+.||++
T Consensus 367 ~L~~~~~~~~~~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~l~~p~~~L~fAG~~t~~~~~-g~v~GAi~SG~~ 445 (520)
T 1s3e_A 367 LYAKVLGSLEALEPVHYEEKNWCEEQYSGGCYTTYFPPGILTQYGRVLRQPVDRIYFAGTETATHWS-GYMEGAVEAGER 445 (520)
T ss_dssp HHHHHHTCGGGGCCSEEEEEEGGGCTTTCSSSCBCCCTTHHHHHGGGTTCCBTTEEECSGGGCSSST-TSHHHHHHHHHH
T ss_pred HHHHHhCccccCCccEEEEEeeCCCCCCCCCCccccCCCccccchHHHhCCCCCEEEeehhhcCcCc-EEhHHHHHHHHH
Confidence 99999986321245666777886432 124455421 234456788999999999643333 689999999999
Q ss_pred HHHHHHHHhCCCCccccccCCC
Q 014807 367 AANRVVDYLGDGSFSKIIPVEE 388 (418)
Q Consensus 367 aA~~Il~~~~~~~~~~~~~~~~ 388 (418)
||++|++.++......++..+|
T Consensus 446 aA~~i~~~l~~~~~~~~~~~~~ 467 (520)
T 1s3e_A 446 AAREILHAMGKIPEDEIWQSEP 467 (520)
T ss_dssp HHHHHHHHTTSSCGGGSSCCCC
T ss_pred HHHHHHHHHhcCccccccccCC
Confidence 9999999998755566666545
No 5
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.94 E-value=4.9e-26 Score=228.19 Aligned_cols=324 Identities=15% Similarity=0.099 Sum_probs=220.6
Q ss_pred CcccccccCCCCCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhH
Q 014807 27 PLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCS 106 (418)
Q Consensus 27 p~~~~~~l~~~~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~S 106 (418)
|.+...++..+.+++.++++++.... .. .. ...+++|+.+|+++. ++++..+.++.|++.++++.+++++|
T Consensus 114 p~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~---~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s 184 (478)
T 2ivd_A 114 PASPPAFLASDILPLGARLRVAGELF---SR--RA---PEGVDESLAAFGRRH-LGHRATQVLLDAVQTGIYAGDVEQLS 184 (478)
T ss_dssp CCSHHHHHTCSSSCHHHHHHHHGGGG---CC--CC---CTTCCCBHHHHHHHH-TCHHHHHHTHHHHHHHHHCCCTTTBB
T ss_pred CCCHHHhccCCCCCHHHHHHHhhhhh---cC--CC---CCCCCCCHHHHHHHh-hCHHHHHHHHHHHhceeecCCHHHhh
Confidence 33333355567778888877654221 10 11 136889999999985 88889999999999999999999999
Q ss_pred HHHHHHHHHHHHhh---------------------cCCC----cceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeE
Q 014807 107 AAATLGILYFIILA---------------------HQKN----FDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTD 161 (418)
Q Consensus 107 a~~~~~~l~~~~~~---------------------~~~~----~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~ 161 (418)
+..++..+..+... .... ....+++||+ ..|++.|++.+ |++|++|++|++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l~~~l~~~l---g~~i~~~~~V~~ 260 (478)
T 2ivd_A 185 VAATFPMLVKMEREHRSLILGAIRAQKAQRQAALPAGTAPKLSGALSTFDGGL-QVLIDALAASL---GDAAHVGARVEG 260 (478)
T ss_dssp HHHHCHHHHHHHHHHSSHHHHHHHHHHHHTCC----CCSCCCCCCEEEETTCT-HHHHHHHHHHH---GGGEESSEEEEE
T ss_pred HHHHhHHHHHHHHhcCcHHHHHHHhhhccccccCcccccccccccEEEECCCH-HHHHHHHHHHh---hhhEEcCCEEEE
Confidence 98776554332100 0011 3456789997 46999999877 579999999999
Q ss_pred EEecCCCCeEEEEEE----CCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEEEEEeccCCCCC-C
Q 014807 162 FIYDEERCCISDVVC----GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVP-N 236 (418)
Q Consensus 162 I~~~~~~g~v~~v~~----~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~-~ 236 (418)
|..++ +++ .|++ +|+++.||+||+|+|++.+.+|+++. +....+.++.+++.++.++++.++++.+.. .
T Consensus 261 i~~~~--~~~-~v~~~~~~~g~~~~ad~vV~a~~~~~~~~ll~~l---~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~ 334 (478)
T 2ivd_A 261 LARED--GGW-RLIIEEHGRRAELSVAQVVLAAPAHATAKLLRPL---DDALAALVAGIAYAPIAVVHLGFDAGTLPAPD 334 (478)
T ss_dssp EECC----CC-EEEEEETTEEEEEECSEEEECSCHHHHHHHHTTT---CHHHHHHHHTCCBCCEEEEEEEECTTSSCCCC
T ss_pred EEecC--CeE-EEEEeecCCCceEEcCEEEECCCHHHHHHHhhcc---CHHHHHHHhcCCCCcEEEEEEEEccccCCCCC
Confidence 99876 344 4665 56789999999999999999998642 245567788899999999999999876432 1
Q ss_pred CCcceecc--CCCccceeeeccccccccCCCCCeEEEEEeecC--CCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeee
Q 014807 237 VSNACSGF--GDSLAWTFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHK 312 (418)
Q Consensus 237 ~~~~~~~~--~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~ 312 (418)
.+..+... +....+..++.+. .+...+++..++.+.+.+. ..+.+.+++++.+.++++|++++|... .+....
T Consensus 335 ~~~~~~~~~~~~~~~~~~~~s~~-~~~~~p~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~p~~~~ 411 (478)
T 2ivd_A 335 GFGFLVPAEEQRRMLGAIHASTT-FPFRAEGGRVLYSCMVGGARQPGLVEQDEDALAALAREELKALAGVTA--RPSFTR 411 (478)
T ss_dssp SSEEECCGGGCCSCCEEEEHHHH-CGGGBSTTCEEEEEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCS--CCSEEE
T ss_pred ceEEEecCCCCCceEEEEEEccc-CCCcCCCCCEEEEEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCC--CCcEEE
Confidence 22112110 1112222343322 2222323455655544332 235567899999999999999999753 456667
Q ss_pred EEEcCCCccccCCCCCCCC----CCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 313 IRRFPKSLTHFFPGSYKYM----MRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 313 v~r~~~a~~~~~pg~~~~r----~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
+++|+++.+.+.+|+.... +...+ .+||||||+++ .+ .+|++|+.||++||++|++.++.
T Consensus 412 ~~~w~~~~p~~~~g~~~~~~~~~~~~~~-~~~l~~aG~~~---~g-~gv~gA~~SG~~aA~~i~~~l~~ 475 (478)
T 2ivd_A 412 VFRWPLGIPQYNLGHLERVAAIDAALQR-LPGLHLIGNAY---KG-VGLNDCIRNAAQLADALVAGNTS 475 (478)
T ss_dssp EEEESSCCBCCBTTHHHHHHHHHHHHHT-STTEEECSTTT---SC-CSHHHHHHHHHHHHHHHCC----
T ss_pred EEECCCcccCCCcCHHHHHHHHHHHHhh-CCCEEEEccCC---CC-CCHHHHHHHHHHHHHHHHHhhcc
Confidence 8899999888888864211 11112 68999999994 23 36999999999999999887764
No 6
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.94 E-value=3.1e-26 Score=228.92 Aligned_cols=322 Identities=15% Similarity=0.198 Sum_probs=213.4
Q ss_pred CcccccccCCCCCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhH
Q 014807 27 PLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCS 106 (418)
Q Consensus 27 p~~~~~~l~~~~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~S 106 (418)
|.+...+++.+.+++.+|++.+.... . ... ...+++|+.+|+++. ++.+..+.++.|++.++|+.+++++|
T Consensus 115 p~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~---~~~~~~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~s 185 (470)
T 3i6d_A 115 PTKIAPFVSTGLFSLSGKARAAMDFI---L--PAS---KTKDDQSLGEFFRRR-VGDEVVENLIEPLLSGIYAGDIDKLS 185 (470)
T ss_dssp ---------------CCSHHHHHHHH---S--CCC---SSSSCCBHHHHHHHH-SCHHHHHHTHHHHHHHTTCSCTTTBB
T ss_pred cCchHHhhccCcCCHHHHHHHhcCcc---c--CCC---CCCCCcCHHHHHHHh-cCHHHHHHhccchhcEEecCCHHHhh
Confidence 44444466778888888887544221 1 011 246889999999985 88888999999999999999999999
Q ss_pred HHHHHHHHHHHH-------hh---cC-----------CCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEec
Q 014807 107 AAATLGILYFII-------LA---HQ-----------KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD 165 (418)
Q Consensus 107 a~~~~~~l~~~~-------~~---~~-----------~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~ 165 (418)
+...++.+..+. .+ .. ....+..+.||++ .|++.|++.+.+ ++|++|++|++|..+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~l~~~l~~~l~~--~~i~~~~~V~~i~~~ 262 (470)
T 3i6d_A 186 LMSTFPQFYQTEQKHRSLILGMKKTRPQGSGQQLTAKKQGQFQTLSTGLQ-TLVEEIEKQLKL--TKVYKGTKVTKLSHS 262 (470)
T ss_dssp HHHHCGGGCC-------------------------------EEEETTCTH-HHHHHHHHTCCS--EEEECSCCEEEEEEC
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHhhccccccccccccCCceEEEeCChHH-HHHHHHHHhcCC--CEEEeCCceEEEEEc
Confidence 987765442110 00 00 0123456789975 699999887654 799999999999988
Q ss_pred CCCCeEEEEEE-CCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCC--CCccee
Q 014807 166 EERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN--VSNACS 242 (418)
Q Consensus 166 ~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~--~~~~~~ 242 (418)
+ +++ .|++ +|+++.||+||+|+|++.+.+++.+.. ..+.++.+++.++.++++.|+++.+... ....+.
T Consensus 263 ~--~~~-~v~~~~g~~~~ad~vi~a~p~~~~~~l~~~~~-----~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~ 334 (470)
T 3i6d_A 263 G--SCY-SLELDNGVTLDADSVIVTAPHKAAAGMLSELP-----AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVI 334 (470)
T ss_dssp S--SSE-EEEESSSCEEEESEEEECSCHHHHHHHTTTST-----THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEE
T ss_pred C--CeE-EEEECCCCEEECCEEEECCCHHHHHHHcCCch-----hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEc
Confidence 7 345 4666 566899999999999999999887642 2457788899999999999998876321 111121
Q ss_pred ccCCCcc--ceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCC
Q 014807 243 GFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPK 318 (418)
Q Consensus 243 ~~~~~~~--~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~ 318 (418)
....... ...++ +...+...+.+..++.+.+.+ .+.+.+++++++++.++++|++++|... .+....+++|++
T Consensus 335 ~~~~~~~~~~~~~~-s~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~--~p~~~~~~~w~~ 411 (470)
T 3i6d_A 335 SRNSDFAITACTWT-NKKWPHAAPEGKTLLRAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNING--EPEMTCVTRWHE 411 (470)
T ss_dssp CSTTCCSEEEEEEH-HHHCGGGSCTTCEEEEEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCS--CCSEEEEEEEEE
T ss_pred cCCCCCCceEEEEE-cCcCCCcCCCCCEEEEEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCC--CceEEEEEEcCC
Confidence 1111110 01232 211223333345555554432 2345678999999999999999998743 567778899999
Q ss_pred CccccCCCCCCC----CCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHh
Q 014807 319 SLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 319 a~~~~~pg~~~~----r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
++|.|.+|+... ++...++.+|||+||||+ . + .+|++|+.||+++|++|++.+
T Consensus 412 a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~--~-g-~gv~~a~~sG~~aA~~i~~~l 468 (470)
T 3i6d_A 412 SMPQYHVGHKQRIKELREALASAYPGVYMTGASF--E-G-VGIPDCIDQGKAAVSDALTYL 468 (470)
T ss_dssp EEEECBTTHHHHHHHHHHHHHHHSTTEEECSTTT--S-C-CSHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHHHHHHHhhCCCEEEEeecC--C-C-CCHHHHHHHHHHHHHHHHHHh
Confidence 999999987532 122234568999999995 2 3 369999999999999999876
No 7
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.93 E-value=9.5e-26 Score=225.97 Aligned_cols=325 Identities=13% Similarity=0.095 Sum_probs=222.4
Q ss_pred CcccccccCCCCCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhH
Q 014807 27 PLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCS 106 (418)
Q Consensus 27 p~~~~~~l~~~~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~S 106 (418)
|.+...+++.+.+++.+|+ .+.-+.. . . ........+++|+.+|++++ +++++.+.++.|++.++|+.+++++|
T Consensus 110 p~~~~~~~~~~~~~~~~~~-~~~~~~~--~-~-~~~~~~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~ls 183 (475)
T 3lov_A 110 PTDLDLFRQTTLLTEEEKQ-EVADLLL--H-P-SDSLRIPEQDIPLGEYLRPR-LGDALVEKLIEPLLSGIYAGNIDQMS 183 (475)
T ss_dssp ESCHHHHTTCSSSCHHHHH-HHHHHHH--S-C-CTTCCCCSSCCBHHHHHHHH-HCHHHHHHTHHHHHHGGGCCCTTTSB
T ss_pred cCchHHHhhccCCChhHHH-HhhCccc--C-C-cccccCCCCCcCHHHHHHHH-hCHHHHHHHHHHHhceeecCChHHcC
Confidence 4444447788899999998 3321111 1 0 11111136789999999985 88889999999999999999999999
Q ss_pred HHHHHHHHHHHH----------hhcC--------------CCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEE
Q 014807 107 AAATLGILYFII----------LAHQ--------------KNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDF 162 (418)
Q Consensus 107 a~~~~~~l~~~~----------~~~~--------------~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I 162 (418)
+..+++.+..+. .... ....+.+++||++ .|++.|++.+.+ ++|++|++|++|
T Consensus 184 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~-~l~~~l~~~l~~--~~i~~~~~V~~i 260 (475)
T 3lov_A 184 TFATYPQFVANEQKAGSLFEGMRLMRPLDQLPQTPQTTIKATGQFLSLETGLE-SLIERLEEVLER--SEIRLETPLLAI 260 (475)
T ss_dssp STTTCHHHHHHHHHHSSHHHHHHHTCC--------------CCSEEEETTCHH-HHHHHHHHHCSS--CEEESSCCCCEE
T ss_pred HHHHHHHHHHHHHhcCcHHHHHHHhcccccccccccccccCCCcEEeeCChHH-HHHHHHHhhccC--CEEEcCCeeeEE
Confidence 876555543221 0001 1234567889985 699999987754 799999999999
Q ss_pred EecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCC-CCcce
Q 014807 163 IYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSNAC 241 (418)
Q Consensus 163 ~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~-~~~~~ 241 (418)
..++ +.+ .|+++++++.||+||+|+|++.+.+|+++.. . +.+..+++.++.++++.|+++...+. ....+
T Consensus 261 ~~~~--~~~-~v~~~~g~~~ad~vV~a~p~~~~~~ll~~~~---~---~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l 331 (475)
T 3lov_A 261 SRED--GRY-RLKTDHGPEYADYVLLTIPHPQVVQLLPDAH---L---PELEQLTTHSTATVTMIFDQQQSLPIEGTGFV 331 (475)
T ss_dssp EEET--TEE-EEECTTCCEEESEEEECSCHHHHHHHCTTSC---C---HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEE
T ss_pred EEeC--CEE-EEEECCCeEECCEEEECCCHHHHHHHcCccC---H---HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEE
Confidence 9887 444 4666433899999999999999999987652 1 46788899999999999998762111 11112
Q ss_pred eccCCCcc--ceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcC
Q 014807 242 SGFGDSLA--WTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFP 317 (418)
Q Consensus 242 ~~~~~~~~--~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~ 317 (418)
........ ...|+ +...+... ++..++.+.+.. ...+.+++++++++.++++|++++|... .+....+++|+
T Consensus 332 ~~~~~~~~~~~~~~~-s~~~~~~~-p~~~~l~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~--~p~~~~v~~w~ 407 (475)
T 3lov_A 332 VNRRAPYSITACTAI-DQKWNHSA-PDHTVLRAFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTL--EPKQVIISRLM 407 (475)
T ss_dssp ECTTSSCSEEEEEEH-HHHCTTTC-TTEEEEEEEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCC--CCSEEEEEEEE
T ss_pred ecCCCCCceEEEEEE-cccCCCCC-CCcEEEEEEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCC--CCeEEEEEEcc
Confidence 11111111 01222 21112222 233444443322 2345668999999999999999998643 56778899999
Q ss_pred CCccccCCCCCCC----CCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 318 KSLTHFFPGSYKY----MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 318 ~a~~~~~pg~~~~----r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
+++|.|.+|+... ++...++.+|||||||++ . + .+|++|+.||+++|++|++.++.
T Consensus 408 ~a~p~~~~g~~~~~~~~~~~l~~~~~~l~~aG~~~--~-g-~g~~~a~~sG~~aA~~i~~~l~~ 467 (475)
T 3lov_A 408 DGLPAYTVGHADRIQRVREEVLAQYPGIYLAGLAY--D-G-VGLPDCVASAKTMIESIELEQSH 467 (475)
T ss_dssp EEEECCCTTHHHHHHHHHHHHHHHSTTEEECSTTT--S-C-SSHHHHHHHHHHHHHHHHHTC--
T ss_pred cCCCCCCCChHHHHHHHHHHHHhhCCCEEEEccCC--C-C-CCHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999997432 122234678999999995 2 3 37999999999999999998874
No 8
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.93 E-value=1.8e-25 Score=225.61 Aligned_cols=332 Identities=13% Similarity=0.091 Sum_probs=218.4
Q ss_pred CCcccccccCCCCCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhh
Q 014807 26 TPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQC 105 (418)
Q Consensus 26 ~p~~~~~~l~~~~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 105 (418)
.|.+...+++...+++.+|++.+..... ........ ...+++|+.+|++++ ++++.++.+++|++.++++.+++++
T Consensus 109 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~s~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (504)
T 1sez_A 109 LPSNPIDLIKSNFLSTGSKLQMLLEPIL--WKNKKLSQ-VSDSHESVSGFFQRH-FGKEVVDYLIDPFVAGTCGGDPDSL 184 (504)
T ss_dssp CCSSHHHHHHSSSSCHHHHHHHHTHHHH--C-----------CCCBHHHHHHHH-HCHHHHHTTHHHHHHHHHSCCGGGS
T ss_pred CCCCHHHHhccccCCHHHHHHHhHhhhc--cCcccccc-cCCCCccHHHHHHHH-cCHHHHHHHHHHHHccccCCChHHh
Confidence 4444444556677888888876542111 00000000 124679999999986 8899999999999999999999999
Q ss_pred HHHHHHHHHHHHH--------------hhcC---------------CCcceeeecCCcchhhHHHHHHHHHhcC-cEEEc
Q 014807 106 SAAATLGILYFII--------------LAHQ---------------KNFDLVWCRGTLREKIFEPWMDSMRTRG-CEFLD 155 (418)
Q Consensus 106 Sa~~~~~~l~~~~--------------~~~~---------------~~~~~~~~~gG~~~~l~~~l~~~l~~~G-~~I~l 155 (418)
|+..+++.+.... +... ......+++||+ +.|+++|++.+ | ++|++
T Consensus 185 s~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GG~-~~l~~~l~~~l---~~~~i~~ 260 (504)
T 1sez_A 185 SMHHSFPELWNLEKRFGSVILGAIRSKLSPKNEKKQGPPKTSANKKRQRGSFSFLGGM-QTLTDAICKDL---REDELRL 260 (504)
T ss_dssp BHHHHCHHHHHHHHHTSCHHHHHHHHTTC----------CCCSCCSTTCSCBEETTCT-HHHHHHHHTTS---CTTTEET
T ss_pred hHHHHhHHHHHHHHHhCCHHHHHHHhhhcccccccccccchhhccccCCceEeeCcHH-HHHHHHHHhhc---ccceEEc
Confidence 9987655443321 0000 011245688997 46999998754 4 78999
Q ss_pred CceeeEEEecCCCCe----EEEEEE---CC---eEEecCEEEEccChhhHHHhhcc---cccCChHHHHHhcCCCCccEE
Q 014807 156 GRRVTDFIYDEERCC----ISDVVC---GK---ETYSAGAVVLAVGISTLQELIKN---SILCNREEFLKVLNLASIDVV 222 (418)
Q Consensus 156 ~t~V~~I~~~~~~g~----v~~v~~---~g---~~~~ad~VV~A~p~~~~~~Ll~~---~~~~~~~~~~~l~~l~~~~~~ 222 (418)
|++|++|..+++ +. .+.|++ +| +++.||+||+|+|+..+.+++.. ..++ +. .+..+++.++.
T Consensus 261 ~~~V~~I~~~~~-~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll~~~~~~~~~-~~---~l~~~~~~~~~ 335 (504)
T 1sez_A 261 NSRVLELSCSCT-EDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMKIAKRGNPFL-LN---FIPEVDYVPLS 335 (504)
T ss_dssp TCCEEEEEEECS-SSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSEEESSSSBCC-CT---TSCCCCEEEEE
T ss_pred CCeEEEEEecCC-CCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHhhcccCCccc-HH---HHhcCCCCceE
Confidence 999999998774 31 134555 24 57899999999999999998842 1121 11 26677888899
Q ss_pred EEEEEeccCCCCCC--CCcceeccCC-----CccceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHH
Q 014807 223 SVKLWFDKKVTVPN--VSNACSGFGD-----SLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAV 293 (418)
Q Consensus 223 ~v~l~~~~~~~~~~--~~~~~~~~~~-----~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~ 293 (418)
++++.|+++.+... .+..+..... .....+++ +...+...+++..++.+...+ ...+..++++++++.++
T Consensus 336 ~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~-s~~~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~ 414 (504)
T 1sez_A 336 VVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFS-SMMFPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVT 414 (504)
T ss_dssp EEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEH-HHHCGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHH
T ss_pred EEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEee-ccccCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHH
Confidence 99999988765221 1211111100 01011232 223333333344444433222 23466789999999999
Q ss_pred HHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCC---CCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHH
Q 014807 294 SYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMM---RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANR 370 (418)
Q Consensus 294 ~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~---~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~ 370 (418)
++|++++|... .+....+.+|++++|.|.+|+....+ ...++++||||||+++ . | .+|++|+.||++||++
T Consensus 415 ~~L~~~~g~~~--~p~~~~~~~w~~~~p~~~~g~~~~~~~~~~~~~~~~~l~~aG~~~--~-g-~~v~gai~sG~~aA~~ 488 (504)
T 1sez_A 415 SDLKQLLGAEG--EPTYVNHLYWSKAFPLYGHNYDSVLDAIDKMEKNLPGLFYAGNHR--G-G-LSVGKALSSGCNAADL 488 (504)
T ss_dssp HHHHHHHCBCS--CCSSEEEEEEEEEEECCCTTHHHHHHHHHHHHHHSTTEEECCSSS--S-C-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCC--CCeEEEEeECCCCCCccCcCHHHHHHHHHHHHHhCCCEEEEeecC--C-C-CCHHHHHHHHHHHHHH
Confidence 99999998743 46677788999999999988643221 1224678999999995 3 4 4899999999999999
Q ss_pred HHHHhCC
Q 014807 371 VVDYLGD 377 (418)
Q Consensus 371 Il~~~~~ 377 (418)
|++.++.
T Consensus 489 il~~l~~ 495 (504)
T 1sez_A 489 VISYLES 495 (504)
T ss_dssp HHHHHSS
T ss_pred HHHHHhh
Confidence 9999874
No 9
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.93 E-value=4.2e-25 Score=219.95 Aligned_cols=293 Identities=12% Similarity=0.103 Sum_probs=201.9
Q ss_pred hhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChh-hhHHHHHHHHHHHH-----HhhcCCCcceeeecCCcchhh
Q 014807 65 RKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAE-QCSAAATLGILYFI-----ILAHQKNFDLVWCRGTLREKI 138 (418)
Q Consensus 65 ~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~-~~Sa~~~~~~l~~~-----~~~~~~~~~~~~~~gG~~~~l 138 (418)
..++++|+.+|+++++.++. .+.++.+++.+.++.+++ ++|+..++..+... +.. ..+....++.||++ .|
T Consensus 141 ~~~~~~s~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~gG~~-~l 217 (453)
T 2yg5_A 141 RDLDTVSFKQWLINQSDDAE-ARDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVD-EDFILDKRVIGGMQ-QV 217 (453)
T ss_dssp HHHHSSBHHHHHHHHCSCHH-HHHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHC-HHHHTCEEETTCTH-HH
T ss_pred hhhhhccHHHHHHhhcCCHH-HHHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhcc-CCCcceEEEcCChH-HH
Confidence 34678999999999877766 667889988888898999 99998876655321 000 00112356889974 69
Q ss_pred HHHHHHHHHhcCcEEEcCceeeEEEecCCCCe-EEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCC
Q 014807 139 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCC-ISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 217 (418)
Q Consensus 139 ~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~-v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~ 217 (418)
++.|++.+ |++|++|++|++|..++ ++ + .|+++|+++.||+||+|+|+..+.+|+..+.++ ....+.++.+.
T Consensus 218 ~~~l~~~l---g~~i~~~~~V~~i~~~~--~~~v-~v~~~~~~~~ad~VI~a~p~~~~~~l~~~p~lp-~~~~~~i~~~~ 290 (453)
T 2yg5_A 218 SIRMAEAL---GDDVFLNAPVRTVKWNE--SGAT-VLADGDIRVEASRVILAVPPNLYSRISYDPPLP-RRQHQMHQHQS 290 (453)
T ss_dssp HHHHHHHH---GGGEECSCCEEEEEEET--TEEE-EEETTTEEEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHGGGEE
T ss_pred HHHHHHhc---CCcEEcCCceEEEEEeC--CceE-EEEECCeEEEcCEEEEcCCHHHHhcCEeCCCCC-HHHHHHHhcCC
Confidence 99998765 68999999999999877 54 5 466788899999999999999998887554442 44556788888
Q ss_pred CccEEEEEEEeccCCCCCCCCc-ceeccCCCccceeeeccccccccCCCC-CeEEEEEeec--CCCCCCCCHHHHHHHHH
Q 014807 218 SIDVVSVKLWFDKKVTVPNVSN-ACSGFGDSLAWTFFDLNKIYDEHKDDS-ATVIQADFYH--ANELMPLKDDQVVAKAV 293 (418)
Q Consensus 218 ~~~~~~v~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~s~~~~~~~~~~-~~~l~~~~~~--~~~~~~~~~~el~~~~~ 293 (418)
+.++.++++.|+++++...... .+...+....+ +++.+. . ++ ..++...+.+ ...|.+++++++.+.++
T Consensus 291 ~~~~~kv~l~~~~~~w~~~~~~g~~~~~~~~~~~-~~~~~~-----~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l 363 (453)
T 2yg5_A 291 LGLVIKVHAVYETPFWREDGLSGTGFGASEVVQE-VYDNTN-----H-EDDRGTLVAFVSDEKADAMFELSAEERKATIL 363 (453)
T ss_dssp ECCEEEEEEEESSCGGGGGTEEEEEECTTSSSCE-EEECCC-----T-TCSSEEEEEEEEHHHHHHHHHSCHHHHHHHHH
T ss_pred CcceEEEEEEECCCCCCCCCCCceeecCCCCeEE-EEeCCC-----C-CCCCCEEEEEeccHHHHHHhcCCHHHHHHHHH
Confidence 8889999999998865322111 11111122222 344331 1 22 2444433322 23455678999999999
Q ss_pred HHHhhhhcCCCCceeeeeeEEEcCCCc-------cccCCCCCC-CCCCCCCCCCCEEEeccccccCCCccchHHHHHHHH
Q 014807 294 SYLSKCIKDFSTATVMDHKIRRFPKSL-------THFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGL 365 (418)
Q Consensus 294 ~~L~~~~p~~~~~~~~~~~v~r~~~a~-------~~~~pg~~~-~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~ 365 (418)
++|++++|... .+++...+.+|.... +.+.||+.. .++...++++||||||+++.+.++ ++|+||+.||+
T Consensus 364 ~~L~~~~~~~~-~~p~~~~~~~W~~~~~~~G~~~~~~~~g~~~~~~~~~~~p~~~l~~aG~~~~~~~~-g~v~gA~~SG~ 441 (453)
T 2yg5_A 364 ASLARYLGPKA-EEPVVYYESDWGSEEWTRGCYAASFDLGGLHRYGADSRTPVGPIHFSCSDIAAEGY-QHVDGAVRMGQ 441 (453)
T ss_dssp HHHHHHHCGGG-GCCSEEEECCTTTCTTTCSSSCEEECTTHHHHHGGGTTCCBTTEEECCGGGCSTTT-TSHHHHHHHHH
T ss_pred HHHHHHhCccC-CCccEEEEeecCCCCCCCCCCcCcCCCCccccchHHHhCCcCceEEeecccccccc-cchHHHHHHHH
Confidence 99999998532 245566667786431 234566421 233456788999999999643233 68999999999
Q ss_pred HHHHHHHHHhC
Q 014807 366 EAANRVVDYLG 376 (418)
Q Consensus 366 ~aA~~Il~~~~ 376 (418)
+||++|++.++
T Consensus 442 ~aA~~i~~~l~ 452 (453)
T 2yg5_A 442 RTAADIIARSK 452 (453)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHhc
Confidence 99999998765
No 10
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.92 E-value=2.4e-24 Score=216.90 Aligned_cols=294 Identities=14% Similarity=0.074 Sum_probs=203.9
Q ss_pred HhhcCCccHHHHHHHhC--CCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHH---hhcCCCcceeeecCCcchhh
Q 014807 64 WRKYDSITARELFKQFG--CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFII---LAHQKNFDLVWCRGTLREKI 138 (418)
Q Consensus 64 ~~~~d~~s~~e~l~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~---~~~~~~~~~~~~~gG~~~~l 138 (418)
+..++++|+.+|+++++ +++. .+.++++++...++.+++++|+..++..+.... .+.........+.||+ ..|
T Consensus 180 ~~~~~~~s~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~-~~l 257 (495)
T 2vvm_A 180 FRKYDEMSYSERIDQIRDELSLN-ERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQ-SAF 257 (495)
T ss_dssp HHHHHTSBHHHHHHHHGGGCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCH-HHH
T ss_pred hhhhhhhhHHHHHHHhhccCCHH-HHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCH-HHH
Confidence 34578999999999987 7776 568999999999999999999988876653210 0000001224578997 469
Q ss_pred HHHHHHHHHhcC-cEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCC
Q 014807 139 FEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 216 (418)
Q Consensus 139 ~~~l~~~l~~~G-~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l 216 (418)
++.|++.+.+.| ++|++|++|++|..++ +.+ .|++ +|+++.||+||+|+|+..+.++...+.++ ....+.++.+
T Consensus 258 ~~~l~~~l~~~g~~~i~~~~~V~~i~~~~--~~v-~v~~~~g~~~~ad~vI~a~~~~~l~~i~~~p~lp-~~~~~ai~~~ 333 (495)
T 2vvm_A 258 ARRFWEEAAGTGRLGYVFGCPVRSVVNER--DAA-RVTARDGREFVAKRVVCTIPLNVLSTIQFSPALS-TERISAMQAG 333 (495)
T ss_dssp HHHHHHHHHTTTCEEEESSCCEEEEEECS--SSE-EEEETTCCEEEEEEEEECCCGGGGGGSEEESCCC-HHHHHHHHHC
T ss_pred HHHHHHHhhhcCceEEEeCCEEEEEEEcC--CEE-EEEECCCCEEEcCEEEECCCHHHHhheeeCCCCC-HHHHHHHHhc
Confidence 999999999988 9999999999999876 445 4666 46689999999999999998886444442 4556678888
Q ss_pred CCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHH
Q 014807 217 ASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYL 296 (418)
Q Consensus 217 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~el~~~~~~~L 296 (418)
.+.++.++++.|+++.+ . .+..+...+....+ +++.+. .+.+..++.. +.+... .+++++..+.++++|
T Consensus 334 ~~~~~~kv~l~~~~~~~-~-~~~g~~~~~~~~~~-~~~~~~-----~~~~~~vl~~-~~~~~~--~~~~~e~~~~~~~~L 402 (495)
T 2vvm_A 334 HVSMCTKVHAEVDNKDM-R-SWTGIAYPFNKLCY-AIGDGT-----TPAGNTHLVC-FGNSAN--HIQPDEDVRETLKAV 402 (495)
T ss_dssp CCCCCEEEEEEESCGGG-G-GEEEEECSSCSSCE-EEEEEE-----CTTSCEEEEE-EECSTT--CCCTTTCHHHHHHHH
T ss_pred CCCceeEEEEEECCccC-C-CceeEecCCCCcEE-EecCCC-----CCCCCeEEEE-EeCccc--cCCCHHHHHHHHHHH
Confidence 89889999999998764 2 22112111222332 333221 1123345443 443222 145556778899999
Q ss_pred hhhhcCCCCceeeeeeEEEcCC------CccccCCCCCC-CCCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHH
Q 014807 297 SKCIKDFSTATVMDHKIRRFPK------SLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAAN 369 (418)
Q Consensus 297 ~~~~p~~~~~~~~~~~v~r~~~------a~~~~~pg~~~-~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~ 369 (418)
++++|... .+....+++|.. +++.+.||+.. .++...++.+||||||+++...++ ++||||+.||++||+
T Consensus 403 ~~~~~~~~--~~~~~~~~~W~~dp~~~g~y~~~~~g~~~~~~~~l~~p~~~l~fAGe~t~~~~~-g~veGAi~SG~raA~ 479 (495)
T 2vvm_A 403 GQLAPGTF--GVKRLVFHNWVKDEFAKGAWFFSRPGMVSECLQGLREKHGGVVFANSDWALGWR-SFIDGAIEEGTRAAR 479 (495)
T ss_dssp HTTSTTSC--CEEEEEECCTTTCTTTSSSSCCCCTTHHHHHHHHHHCCBTTEEECCGGGCSSST-TSHHHHHHHHHHHHH
T ss_pred HHhcCCCC--CceEEEEeEcCCCCCCCCCccCcCCCcchhhHHHHhCcCCCEEEechhhhcCCc-eEEEhHHHHHHHHHH
Confidence 99998743 466667778853 33445566531 123334678999999999643333 799999999999999
Q ss_pred HHHHHhCC
Q 014807 370 RVVDYLGD 377 (418)
Q Consensus 370 ~Il~~~~~ 377 (418)
+|++.++.
T Consensus 480 ~i~~~l~~ 487 (495)
T 2vvm_A 480 VVLEELGT 487 (495)
T ss_dssp HHHHHHCC
T ss_pred HHHHHhcc
Confidence 99999873
No 11
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.91 E-value=7.2e-23 Score=206.39 Aligned_cols=294 Identities=12% Similarity=0.071 Sum_probs=158.5
Q ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCCCcceeeecCCcchhhHHHHHHHHHhc
Q 014807 70 ITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTR 149 (418)
Q Consensus 70 ~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~ 149 (418)
.|+.+++.++..++. ++.++... ...++.+|.+.++...+ +... ... ....+|+||+ ..|+++|++.++++
T Consensus 164 ~~~~~~~~~~~~~~~-l~~~l~~~-~~~~g~~p~~~~~~~~~--~~~~--~~~--~G~~~p~GG~-~~l~~aL~~~~~~~ 234 (501)
T 4dgk_A 164 RSVYSKVASYIEDEH-LRQAFSFH-SLLVGGNPFATSSIYTL--IHAL--ERE--WGVWFPRGGT-GALVQGMIKLFQDL 234 (501)
T ss_dssp HHHHHHHHTTCCCHH-HHHHHHHH-HHHHHSCC--CCCTHHH--HHHH--HSC--CCEEEETTHH-HHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHhccHH-HHhhhhhh-hcccCCCcchhhhhhhh--hhhh--hcc--CCeEEeCCCC-cchHHHHHHHHHHh
Confidence 478889988755555 55555432 23345556665543322 2222 111 1235799997 57999999999999
Q ss_pred CcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhH-HHhhcccccCChHHHHHhcCCCCc-cEEEEEE
Q 014807 150 GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELIKNSILCNREEFLKVLNLASI-DVVSVKL 226 (418)
Q Consensus 150 G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~-~~Ll~~~~~~~~~~~~~l~~l~~~-~~~~v~l 226 (418)
|++|++|++|++|..++ +++++|++ +|+++.||+||++++++.+ ..|++....+ ....+.++..++. +.+++++
T Consensus 235 Gg~I~~~~~V~~I~~~~--~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~Ll~~~~~~-~~~~~~~~~~~~~~s~~~~~~ 311 (501)
T 4dgk_A 235 GGEVVLNARVSHMETTG--NKIEAVHLEDGRRFLTQAVASNADVVHTYRDLLSQHPAA-VKQSNKLQTKRMSNSLFVLYF 311 (501)
T ss_dssp TCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSCEEECCC----------------------------CCEEEEEEE
T ss_pred CCceeeecceeEEEeeC--CeEEEEEecCCcEEEcCEEEECCCHHHHHHHhccccccc-hhhhhhhhccccCCceeEEEe
Confidence 99999999999999988 78888988 6789999999999998876 5667664332 2334455555554 5678889
Q ss_pred EeccCCCCCCCCcceeccCC-----------C---ccce-eeeccccccccCCCCCeEEEEEe-ecCCCCCCC----CHH
Q 014807 227 WFDKKVTVPNVSNACSGFGD-----------S---LAWT-FFDLNKIYDEHKDDSATVIQADF-YHANELMPL----KDD 286 (418)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~-----------~---~~~~-~~d~s~~~~~~~~~~~~~l~~~~-~~~~~~~~~----~~~ 286 (418)
.++++......++++++.+. . .... +...+...+.+.+++.+.+.+.. .+...+.+. .++
T Consensus 312 ~l~~~~~~l~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~s~~dp~~ap~G~~~~~~~~~~p~~~~~~~~~~~~~~ 391 (501)
T 4dgk_A 312 GLNHHHDQLAHHTVCFGPRYRELIDEIFNHDGLAEDFSLYLHAPCVTDSSLAPEGCGSYYVLAPVPHLGTANLDWTVEGP 391 (501)
T ss_dssp EESSCCTTSCSEEEEEECC-------------CCCEEEEEEECGGGTCGGGSSTTCEEEEEEEEECCTTTSCCCHHHHHH
T ss_pred cccCCccccccceeccccchhhhccccccccccccCCceecccCCCCCCCcCCCCCceEEEEEecCccccccccHHHHHH
Confidence 88876542222222322110 0 0000 11123334555655666554322 222112222 246
Q ss_pred HHHHHHHHHHhhh-hcCCCCceeeeeeEEEcCCCc-----------cccCCC---CCCCCCCC-CCCCCCEEEecccccc
Q 014807 287 QVVAKAVSYLSKC-IKDFSTATVMDHKIRRFPKSL-----------THFFPG---SYKYMMRG-FTSFPNLFMAGDWITT 350 (418)
Q Consensus 287 el~~~~~~~L~~~-~p~~~~~~~~~~~v~r~~~a~-----------~~~~pg---~~~~r~~~-~~~~~~l~laGd~~~~ 350 (418)
++.+++++.|++. +|++++ .++...+. .|..+ +...+. ....||.. .++++|||+||++++
T Consensus 392 ~~~~~vl~~l~~~~~P~~~~-~i~~~~~~-tP~~~~~~~~~~~G~~~g~~~~~~q~~~~RP~~~~t~i~gLyl~G~~t~- 468 (501)
T 4dgk_A 392 KLRDRIFAYLEQHYMPGLRS-QLVTHRMF-TPFDFRDQLNAYHGSAFSVEPVLTQSAWFRPHNRDKTITNLYLVGAGTH- 468 (501)
T ss_dssp HHHHHHHHHHHHHTCTTHHH-HEEEEEEE-CTTTTC------------------------------CCTTEEECCCH---
T ss_pred HHHHHHHHHHHHhhCCChHH-ceEEEEEC-CHHHHHHHcCCCCccccChhcchhhccccCCCCCCCCCCCEEEECCCCC-
Confidence 6788889999874 598874 56655554 44332 111111 11235644 378999999999953
Q ss_pred CCCccchHHHHHHHHHHHHHHHHHhCCCCc
Q 014807 351 RHGSWSQERSYVTGLEAANRVVDYLGDGSF 380 (418)
Q Consensus 351 ~~g~~~~egAi~SG~~aA~~Il~~~~~~~~ 380 (418)
+| ++++||+.||+.||++|++++..|..
T Consensus 469 -pG-~Gv~ga~~SG~~aA~~il~dL~gG~~ 496 (501)
T 4dgk_A 469 -PG-AGIPGVIGSAKATAGLMLEDLIGGSH 496 (501)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHC----
T ss_pred -Cc-ccHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 45 58999999999999999999976553
No 12
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.88 E-value=2.6e-21 Score=185.44 Aligned_cols=228 Identities=10% Similarity=0.085 Sum_probs=160.2
Q ss_pred eecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHhhccc--ccC
Q 014807 129 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNS--ILC 205 (418)
Q Consensus 129 ~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~Ll~~~--~~~ 205 (418)
...+|+. .+++.|++.+ |++|+++++|++|..++ +++ .|++ +|+++.||.||+|+|++.+.+|+.+. .+
T Consensus 106 ~~~~g~~-~l~~~l~~~~---g~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~~ad~vV~A~p~~~~~~ll~~~~~~l- 177 (342)
T 3qj4_A 106 VAPQGIS-SIIKHYLKES---GAEVYFRHRVTQINLRD--DKW-EVSKQTGSPEQFDLIVLTMPVPEILQLQGDITTLI- 177 (342)
T ss_dssp ECTTCTT-HHHHHHHHHH---TCEEESSCCEEEEEECS--SSE-EEEESSSCCEEESEEEECSCHHHHTTCBSTHHHHS-
T ss_pred ecCCCHH-HHHHHHHHhc---CCEEEeCCEEEEEEEcC--CEE-EEEECCCCEEEcCEEEECCCHHHHHHHhccccccc-
Confidence 4568874 6888888765 89999999999999877 445 4666 46678999999999999999998752 22
Q ss_pred ChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccC-CCccceeeeccccccccCCCCCeEEEEEeec--CCCCCC
Q 014807 206 NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG-DSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMP 282 (418)
Q Consensus 206 ~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~ 282 (418)
++...+.+..++|.++.+|++.|+++.+.+.++..+.... ....|.++|.+. .....++++.++.+...+ .+++.+
T Consensus 178 ~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~k-~~r~~~~~~~~~v~~~~~~~~~~~~~ 256 (342)
T 3qj4_A 178 SECQRQQLEAVSYSSRYALGLFYEAGTKIDVPWAGQYITSNPCIRFVSIDNKK-RNIESSEIGPSLVIHTTVPFGVTYLE 256 (342)
T ss_dssp CHHHHHHHHTCCBCCEEEEEEECSSCC--CCSCSEEECSSCSSEEEEEEHHHH-TTCCCC-CCCEEEEEECHHHHHHTTT
T ss_pred CHHHHHHHhcCCccccEEEEEEECCCCccCCceeeEEccCCcceEEEEccccC-CCCCCCCCCceEEEECCHHHHHHhhc
Confidence 2345678899999999999999997644333432222112 224554344332 211111233343333222 234677
Q ss_pred CCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCC--CCCCCEEEeccccccCCCccchHHH
Q 014807 283 LKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF--TSFPNLFMAGDWITTRHGSWSQERS 360 (418)
Q Consensus 283 ~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~--~~~~~l~laGd~~~~~~g~~~~egA 360 (418)
++++++.+.++++|++++|... .+++..++||++++|++... .++... ...+||++||||+ .| +++|+|
T Consensus 257 ~~~~~~~~~~~~~l~~~~g~~~--~p~~~~v~rW~~a~p~~~~~---~~~~~~~~~~~~~l~laGd~~---~g-~~v~~a 327 (342)
T 3qj4_A 257 HSIEDVQELVFQQLENILPGLP--QPIATKCQKWRHSQVTNAAA---NCPGQMTLHHKPFLACGGDGF---TQ-SNFDGC 327 (342)
T ss_dssp SCHHHHHHHHHHHHHHHSCSCC--CCSEEEEEEETTCSBSSCCS---SSCSCEEEETTTEEEECSGGG---SC-SSHHHH
T ss_pred CCHHHHHHHHHHHHHHhccCCC--CCceeeeccccccccccccC---CCcceeEecCCccEEEEcccc---CC-CCccHH
Confidence 8999999999999999999554 57888899999999987542 123322 3568999999995 24 489999
Q ss_pred HHHHHHHHHHHHHH
Q 014807 361 YVTGLEAANRVVDY 374 (418)
Q Consensus 361 i~SG~~aA~~Il~~ 374 (418)
+.||+.||++|++.
T Consensus 328 i~sg~~aa~~i~~~ 341 (342)
T 3qj4_A 328 ITSALCVLEALKNY 341 (342)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999764
No 13
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.88 E-value=2.6e-22 Score=200.85 Aligned_cols=299 Identities=11% Similarity=0.106 Sum_probs=187.5
Q ss_pred cCCccHHH--HHHHhCC--CHHHHHHHHHHHHH-hhhcCChhhhHHHHHHHHHHHHHhhcCCCcceeeecCCcchhhHHH
Q 014807 67 YDSITARE--LFKQFGC--SERLYRNVIGPLVQ-VGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEP 141 (418)
Q Consensus 67 ~d~~s~~e--~l~~~~~--~~~~~~~~~~p~~~-~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~ 141 (418)
.+++|+.+ |+.+... .....+.++++++. ..++.+++..|+..+... ..+. .......+..+.||++ .|++.
T Consensus 135 ~~~~s~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~-~~~~-~~~~~~~~~~~~gG~~-~l~~~ 211 (472)
T 1b37_A 135 RDDMSILAMQRLNEHQPNGPATPVDMVVDYYKFDYEFAEPPRVTSLQNTVPL-ATFS-DFGDDVYFVADQRGYE-AVVYY 211 (472)
T ss_dssp TTCCBHHHHHHHHHTSSSSCCSHHHHHHHHHHTHHHHSSCGGGBBSTTTSSC-HHHH-HHCSEEEEECCTTCTT-HHHHH
T ss_pred chhhhHHHHHHHhhhcccccccHHHHHHHHHHHhhhhcccccccchhhcccc-cccc-ccCCceeeeecCCcHH-HHHHH
Confidence 46778765 6665421 11224556666653 335667777765332211 1110 1111112233479975 69999
Q ss_pred HHHHHHhc--------CcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHhhc--ccccCChHHH
Q 014807 142 WMDSMRTR--------GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIK--NSILCNREEF 210 (418)
Q Consensus 142 l~~~l~~~--------G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~Ll~--~~~~~~~~~~ 210 (418)
|++.+.+. |++|++|++|++|..++ ++++ |++ +|++++||+||+|+|+..+.+++. .+.++ ....
T Consensus 212 l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vI~a~~~~~l~~~~~~~~p~Lp-~~~~ 287 (472)
T 1b37_A 212 LAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSP--GGVT-VKTEDNSVYSADYVMVSASLGVLQSDLIQFKPKLP-TWKV 287 (472)
T ss_dssp HHHTTSCBCTTTCCBCCTTEESSCCEEEEEECS--SCEE-EEETTSCEEEESEEEECSCHHHHHTTSSEEESCCC-HHHH
T ss_pred HHHhccccccccccccccEEEcCCEEEEEEEcC--CcEE-EEECCCCEEEcCEEEEecCHHHhccCCeeECCCCC-HHHH
Confidence 99887655 67999999999999877 4464 666 567899999999999999987642 23342 4456
Q ss_pred HHhcCCCCccEEEEEEEeccCCCCCCCCcceecc-CCCc-cceeeeccccccccCCCCCeEEEEEeecC--CCCCCCCHH
Q 014807 211 LKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGF-GDSL-AWTFFDLNKIYDEHKDDSATVIQADFYHA--NELMPLKDD 286 (418)
Q Consensus 211 ~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~-~~~~-~~~~~d~s~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~ 286 (418)
++++.+.+.++.++++.|+++++...+...+..+ .... ...++.. ..+. . ++++++.+.+.+. ..|..++++
T Consensus 288 ~ai~~~~~~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~-p~~~~l~~~~~~~~a~~~~~~~~~ 363 (472)
T 1b37_A 288 RAIYQFDMAVYTKIFLKFPRKFWPEGKGREFFLYASSRRGYYGVWQE--FEKQ-Y-PDANVLLVTVTDEESRRIEQQSDE 363 (472)
T ss_dssp HHHHHSEEECEEEEEEECSSCCSCCSTTCSEEEECCSSTTSSCEEEE--CTTT-S-TTCCEEEEEEEHHHHHHHHTSCHH
T ss_pred HHHHhcCCcceeEEEEECCCcCCCCCCCcceEEecccCCccceeeec--ccCC-C-CCCCEEEEEechHHHHHHHhCCHH
Confidence 7788888888899999999887632111111111 1010 0112211 1111 1 3455555444321 235567899
Q ss_pred HHHHHHHHHHhhhhcCCCCceeeeeeEEEc------CCCccccCCCCCC-CCCCCCCCCCCEEEeccccccCCCccchHH
Q 014807 287 QVVAKAVSYLSKCIKDFSTATVMDHKIRRF------PKSLTHFFPGSYK-YMMRGFTSFPNLFMAGDWITTRHGSWSQER 359 (418)
Q Consensus 287 el~~~~~~~L~~~~p~~~~~~~~~~~v~r~------~~a~~~~~pg~~~-~r~~~~~~~~~l~laGd~~~~~~g~~~~eg 359 (418)
++.+.++++|++++|+....+++...+.+| ..+++.+.+|+.. .++...+|++||||||++++...+ ++|+|
T Consensus 364 e~~~~~l~~L~~~~Pg~~~~~~~~~~~~~W~~~~~~~G~~~~~~~g~~~~~~~~l~~p~~~l~fAG~~t~~~~~-g~v~G 442 (472)
T 1b37_A 364 QTKAEIMQVLRKMFPGKDVPDATDILVPRWWSDRFYKGTFSNWPVGVNRYEYDQLRAPVGRVYFTGEHTSEHYN-GYVHG 442 (472)
T ss_dssp HHHHHHHHHHHHHCTTSCCCCCSEEECCCTTTCTTTSSSEEECBTTCCHHHHHHHHCCBTTEEECSGGGCTTTT-TSHHH
T ss_pred HHHHHHHHHHHHHcCCCCCCCCceEEecccCCCCCCCcccCCCCCCCChhHHHHHhccCCcEEEeecccCCCCC-CchhH
Confidence 999999999999998753224555556677 3333445566542 233445788999999999643223 79999
Q ss_pred HHHHHHHHHHHHHHHhCC
Q 014807 360 SYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 360 Ai~SG~~aA~~Il~~~~~ 377 (418)
|+.||++||++|++.++.
T Consensus 443 A~~SG~~aA~~i~~~l~~ 460 (472)
T 1b37_A 443 AYLSGIDSAEILINCAQK 460 (472)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 999999999999998864
No 14
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.87 E-value=2.5e-22 Score=201.28 Aligned_cols=292 Identities=11% Similarity=0.035 Sum_probs=197.7
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHH---------HHHHHHHhhcC-----CCcceeeec-
Q 014807 67 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATL---------GILYFIILAHQ-----KNFDLVWCR- 131 (418)
Q Consensus 67 ~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~---------~~l~~~~~~~~-----~~~~~~~~~- 131 (418)
.+++|+++|++++ +++++++.++.|++.++|+.+++++|+.+++ .++...+.... ....+.||.
T Consensus 134 ~~~~s~~e~~~~~-~g~~~~~~~~~p~~~~v~~~~~~~ls~~~~~~r~~~~~l~~~~~~~~~~~~~~~~~~~~~f~yp~~ 212 (484)
T 4dsg_A 134 EPPNNFEESFTRQ-FGEGIADIFMRPYNFKVWAVPPCLMSTEWVEERVAPVDLERIRRNIQENRDDLGWGPNATFRFPQR 212 (484)
T ss_dssp SCCSSHHHHHHHH-HHHHHCCCCCHHHHHHHHSSCGGGBCSSSCTTTSCCCCHHHHHHHHHHTCCCCCCSTTSEEEEESS
T ss_pred CCCCCHHHHHHHH-hHHHHHHHHHHHHHhhhcCCCHHHhcHHHHhccccCCCHHHHHHHHhhcccccCCCccceEEeecC
Confidence 5789999999986 8899999999999999999999999986432 22333221111 112245554
Q ss_pred CCcchhhHHHHHHHHHhcCcEEEcC--ceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhccc--ccCCh
Q 014807 132 GTLREKIFEPWMDSMRTRGCEFLDG--RRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNS--ILCNR 207 (418)
Q Consensus 132 gG~~~~l~~~l~~~l~~~G~~I~l~--t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~--~~~~~ 207 (418)
||++ .|+++|++.+.+ .+|+++ ++|++|..++ ++|+ ..+|+++.||+||+|+|++.+.+++.+. .+ ++
T Consensus 213 gG~~-~l~~~la~~l~~--~~i~~~~~~~V~~I~~~~--~~v~--~~~G~~~~ad~VI~a~p~~~~~~ll~~~~~~~-~~ 284 (484)
T 4dsg_A 213 GGTG-IIYQAIKEKLPS--EKLTFNSGFQAIAIDADA--KTIT--FSNGEVVSYDYLISTVPFDNLLRMTKGTGFKG-YD 284 (484)
T ss_dssp SCTH-HHHHHHHHHSCG--GGEEECGGGCEEEEETTT--TEEE--ETTSCEEECSEEEECSCHHHHHHHEECSSCTT-GG
T ss_pred CCHH-HHHHHHHhhhhh--CeEEECCCceeEEEEecC--CEEE--ECCCCEEECCEEEECCCHHHHHHHhhccCCCC-CH
Confidence 8974 699999988754 289999 5699999876 5442 2467789999999999999999998651 12 24
Q ss_pred HHHHHhcCCCCccEEEEEEEeccCCCC--CCCCcceeccCC-CccceeeeccccccccCCCCCeEEEEEeecCCCCCCCC
Q 014807 208 EEFLKVLNLASIDVVSVKLWFDKKVTV--PNVSNACSGFGD-SLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLK 284 (418)
Q Consensus 208 ~~~~~l~~l~~~~~~~v~l~~~~~~~~--~~~~~~~~~~~~-~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 284 (418)
...+.+..++|.++.++++.++++... ...+..++.... .... +...++..+...+++.+++.+.+... +....+
T Consensus 285 ~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~r-i~~~s~~~p~~ap~g~~~l~~e~~~~-~~~~~~ 362 (484)
T 4dsg_A 285 EWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYR-ATVFSNYSKYNVPEGHWSLMLEVSES-KYKPVN 362 (484)
T ss_dssp GHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSE-EECGGGTCGGGSCTTEEEEEEEEEEB-TTBCCC
T ss_pred HHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEE-EEeecCCCcccCCCCeEEEEEEEecC-cCCcCC
Confidence 445677889999999999999876321 111222221111 1111 11223333444434555555444333 344678
Q ss_pred HHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCC---CCCCCEEEeccccccCCCc--cchHH
Q 014807 285 DDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGF---TSFPNLFMAGDWITTRHGS--WSQER 359 (418)
Q Consensus 285 ~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~---~~~~~l~laGd~~~~~~g~--~~~eg 359 (418)
++++++.++++|.++...-.+..+...++.+|+.++|.|.+|+.......+ ... ||+++|.+ ..+.+ .+|+.
T Consensus 363 d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~~~~~~~~l~~~-~l~~~Gr~--g~~~y~v~~~d~ 439 (484)
T 4dsg_A 363 HSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNLLEKAQPELMSR-CIYSRGRF--GAWRYEVGNQDH 439 (484)
T ss_dssp TTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHHT-TEEECSTT--TTCCGGGCSHHH
T ss_pred HHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHHHHHHHHHHHhC-CcEeecCC--cccccCCCChHH
Confidence 999999999999998532222234556788999999999999764321111 123 99999996 33333 57999
Q ss_pred HHHHHHHHHHHHH
Q 014807 360 SYVTGLEAANRVV 372 (418)
Q Consensus 360 Ai~SG~~aA~~Il 372 (418)
|+.||+.||+.|+
T Consensus 440 ~i~sg~~aa~~i~ 452 (484)
T 4dsg_A 440 SFMQGVEAIDHVL 452 (484)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 9999999999986
No 15
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.87 E-value=2.1e-21 Score=196.02 Aligned_cols=293 Identities=12% Similarity=0.073 Sum_probs=197.9
Q ss_pred hcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHH---------HHHHHhhcCC-----Ccceee-e
Q 014807 66 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGI---------LYFIILAHQK-----NFDLVW-C 130 (418)
Q Consensus 66 ~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~---------l~~~~~~~~~-----~~~~~~-~ 130 (418)
..+..|+.+|+.+. +++++.+.++.|++.++++.+++++|+.++... +...+..... .....+ +
T Consensus 139 ~~~~~s~~~~~~~~-~g~~l~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (513)
T 4gde_A 139 NTKPKTFDEWIVRM-MGTGIADLFMRPYNFKVWAVPTTKMQCAWLGERVAAPNLKAVTTNVILGKTAGNWGPNATFRFPA 217 (513)
T ss_dssp CSCCCSHHHHHHHH-HHHHHHHHTHHHHHHHHHSSCGGGBCSGGGCSSCCCCCHHHHHHHHHHTCCCCSCBTTBEEEEES
T ss_pred cccccCHHHHHHHh-hhhhhhhhhcchhhhhhccCChHHhhHHHHHHhhcccchhhhhhhhhhcccccccccccceeecc
Confidence 35678999999984 888999999999999999999999987644321 1222111111 111223 4
Q ss_pred cCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHH
Q 014807 131 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEF 210 (418)
Q Consensus 131 ~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~ 210 (418)
+||+ ..|+++|++.|++.|++|++|++|++|..++ +++ +..+|+++.||+||+|+|++.+.+++.+. ...
T Consensus 218 ~gG~-~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~--~~v--~~~~G~~~~ad~vI~t~P~~~l~~~l~~~-----~~~ 287 (513)
T 4gde_A 218 RGGT-GGIWIAVANTLPKEKTRFGEKGKVTKVNANN--KTV--TLQDGTTIGYKKLVSTMAVDFLAEAMNDQ-----ELV 287 (513)
T ss_dssp SSHH-HHHHHHHHHTSCGGGEEESGGGCEEEEETTT--TEE--EETTSCEEEEEEEEECSCHHHHHHHTTCH-----HHH
T ss_pred cCCH-HHHHHHHHHHHHhcCeeeecceEEEEEEccC--CEE--EEcCCCEEECCEEEECCCHHHHHHhcCch-----hhH
Confidence 7997 4699999999999999999999999999876 543 34478899999999999999999988753 233
Q ss_pred HHhcCCCCccEEEEEEEeccCCCCCC-CCcceeccCCCcc-ceeeeccccccccCCC---------------------CC
Q 014807 211 LKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGDSLA-WTFFDLNKIYDEHKDD---------------------SA 267 (418)
Q Consensus 211 ~~l~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~~~-~~~~d~s~~~~~~~~~---------------------~~ 267 (418)
.....+.|.++.+|.+.++....... +...++-.+.... .-+...++..+...++ +.
T Consensus 288 ~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 367 (513)
T 4gde_A 288 GLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAALPTMQLADGSRPQSTEAKE 367 (513)
T ss_dssp HHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCEECCEETTSCCCSCCSEEC
T ss_pred hhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceEEEEEeccCCCcccccCCc
Confidence 45678899888889888876532111 1111110110000 0001111111111111 11
Q ss_pred eEEEEEee--cCCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCC----CCCCCCCCCE
Q 014807 268 TVIQADFY--HANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYM----MRGFTSFPNL 341 (418)
Q Consensus 268 ~~l~~~~~--~~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r----~~~~~~~~~l 341 (418)
.++...+. ..+++..++++++++.++++|.++.+......++..++.||++++|+|..|+.... +.++. +||
T Consensus 368 ~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~~~~~~~~~~~l~~--~~l 445 (513)
T 4gde_A 368 GPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLEREGTLTQILPKLQD--KDI 445 (513)
T ss_dssp CCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTHHHHHHHHHHHHHH--TTE
T ss_pred ceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhHHHHHHHHHHHHhh--cCc
Confidence 11111111 22456678999999999999999988665557888999999999999999875432 22222 699
Q ss_pred EEeccccccCCCc--cchHHHHHHHHHHHHHHHH
Q 014807 342 FMAGDWITTRHGS--WSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 342 ~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~ 373 (418)
|+||-. ..+.+ +.|+.|+.||+.||+.|+.
T Consensus 446 ~~~GR~--g~~~Y~~~n~D~a~~~g~~aa~~I~~ 477 (513)
T 4gde_A 446 WSRGRF--GSWRYEVGNQDHSFMLGVEAVDNIVN 477 (513)
T ss_dssp EECSTT--TTCCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred EEecCC--cccCcCCCCHHHHHHHHHHHHHHHHc
Confidence 999955 33333 4799999999999999996
No 16
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.83 E-value=1.1e-18 Score=175.66 Aligned_cols=288 Identities=14% Similarity=0.046 Sum_probs=177.3
Q ss_pred hhcCCccHHHHHHHhC-CCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCCCcceeeecCCcchhhHHHHH
Q 014807 65 RKYDSITARELFKQFG-CSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 143 (418)
Q Consensus 65 ~~~d~~s~~e~l~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~ 143 (418)
..++++|+.+|+++.+ ++...++.+.+ ++...... ..+....+.... . ... ...+..+.||++ .|+++|+
T Consensus 178 ~~~~~~s~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~-~-~~~--~~~~~~~~gG~~-~l~~~l~ 248 (498)
T 2iid_A 178 NKYDTYSTKEYLIKEGDLSPGAVDMIGD-LLNEDSGY---YVSFIESLKHDD-I-FAY--EKRFDEIVDGMD-KLPTAMY 248 (498)
T ss_dssp HHHTTSBHHHHHHHTSCCCHHHHHHHHH-HTTCGGGT---TSBHHHHHHHHH-H-HTT--CCCEEEETTCTT-HHHHHHH
T ss_pred HHhhhhhHHHHHHHccCCCHHHHHHHHH-hcCcccch---hHHHHHHHHHHh-c-ccc--CcceEEeCCcHH-HHHHHHH
Confidence 4578899999999875 56665554322 22110000 011111111111 1 111 123456789975 6999999
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCe----EEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCC
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE----TYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLAS 218 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~----~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~ 218 (418)
+.+.. +|++|++|++|..++ ++| .|++ +|+ ++.||+||+|+|+..+.++...+.++ +...++++++++
T Consensus 249 ~~l~~---~i~~~~~V~~I~~~~--~~v-~v~~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~Lp-~~~~~ai~~l~~ 321 (498)
T 2iid_A 249 RDIQD---KVHFNAQVIKIQQND--QKV-TVVYETLSKETPSVTADYVIVCTTSRAVRLIKFNPPLL-PKKAHALRSVHY 321 (498)
T ss_dssp HHTGG---GEESSCEEEEEEECS--SCE-EEEEECSSSCCCEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCE
T ss_pred Hhccc---ccccCCEEEEEEECC--CeE-EEEEecCCcccceEEeCEEEECCChHHHhheecCCCCC-HHHHHHHHhCCC
Confidence 88754 899999999999877 445 4555 443 58999999999999888775444442 455678889999
Q ss_pred ccEEEEEEEeccCCCCCCCC-cceeccCCCccceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHHHH
Q 014807 219 IDVVSVKLWFDKKVTVPNVS-NACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSY 295 (418)
Q Consensus 219 ~~~~~v~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~~~ 295 (418)
.+..++++.|++++|..... ..+...+.+..+.+++ +.. .+.+..++.....+ +..+..++++++.+.++++
T Consensus 322 ~~~~kv~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~-s~~----~p~g~~~L~~~~~g~~a~~~~~~~~~~~~~~~l~~ 396 (498)
T 2iid_A 322 RSGTKIFLTCTTKFWEDDGIHGGKSTTDLPSRFIYYP-NHN----FTNGVGVIIAYGIGDDANFFQALDFKDCADIVFND 396 (498)
T ss_dssp ECEEEEEEEESSCGGGGGTCCSSEEEESSTTCEEECC-SSC----CTTSCEEEEEEEEHHHHHTTTTSCHHHHHHHHHHH
T ss_pred cceeEEEEEeCCCCccCCCccCCcccCCCCcceEEEC-CCC----CCCCCcEEEEEeCCccHhhhhcCCHHHHHHHHHHH
Confidence 99999999999887632211 0010001121222222 111 11234454442222 2356778999999999999
Q ss_pred HhhhhcCCCC---ceeeeeeEEEcCCCccccCCCCCCC---------CCCCCCCCCCEEEeccccccCCCccchHHHHHH
Q 014807 296 LSKCIKDFST---ATVMDHKIRRFPKSLTHFFPGSYKY---------MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVT 363 (418)
Q Consensus 296 L~~~~p~~~~---~~~~~~~v~r~~~a~~~~~pg~~~~---------r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~S 363 (418)
|+++++.... .......+.+|... .|..|++.. ++...++.+||||||+++. ...++|+||+.|
T Consensus 397 L~~~~g~~~~~~~~~~~~~~~~~W~~~--p~~~G~~~~~~~~~~~~~~~~l~~p~~~l~fAGe~t~--~~~g~~~GAi~S 472 (498)
T 2iid_A 397 LSLIHQLPKKDIQSFCYPSVIQKWSLD--KYAMGGITTFTPYQFQHFSDPLTASQGRIYFAGEYTA--QAHGWIDSTIKS 472 (498)
T ss_dssp HHHHHTCCHHHHHHHEEEEEEEEGGGC--TTTCSSEECCCTTHHHHHHHHHHCCBTTEEECSGGGS--SSSSCHHHHHHH
T ss_pred HHHHcCCChhhhhhhcCccEEEecCCC--CCCCceeeecCCcchHHHHHHHhCCCCcEEEEEcccc--cCCcCHHHHHHH
Confidence 9999973211 01123456678652 233443321 1122357899999999963 223689999999
Q ss_pred HHHHHHHHHHHhCC
Q 014807 364 GLEAANRVVDYLGD 377 (418)
Q Consensus 364 G~~aA~~Il~~~~~ 377 (418)
|++||++|++.++.
T Consensus 473 G~raA~~i~~~l~~ 486 (498)
T 2iid_A 473 GLRAARDVNLASEN 486 (498)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhcC
Confidence 99999999999864
No 17
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.82 E-value=2.1e-18 Score=170.35 Aligned_cols=273 Identities=14% Similarity=0.095 Sum_probs=180.4
Q ss_pred hcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHH-------HhhcCCCcceeeecCCcchhh
Q 014807 66 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-------ILAHQKNFDLVWCRGTLREKI 138 (418)
Q Consensus 66 ~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~-------~~~~~~~~~~~~~~gG~~~~l 138 (418)
.++ +|+.+|+.+.+.++. ...++.+++.+.++.+++++|+..++..+... +.. . . ..+.+|+. .+
T Consensus 138 ~~d-~s~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~-~---~-~~~~~g~~-~l 209 (431)
T 3k7m_X 138 DLD-IPLNEYVDKLDLPPV-SRQFLLAWAWNMLGQPADQASALWMLQLVAAHHYSILGVVLS-L---D-EVFSNGSA-DL 209 (431)
T ss_dssp GGC-SBHHHHHHHHTCCHH-HHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSCHHHHHHT-C---C-EEETTCTH-HH
T ss_pred hhc-CCHHHHHHhcCCCHH-HHHHHHHHHHHhcCCChhhhhHHHHHHHHHhcCCccceeecc-h---h-hhcCCcHH-HH
Confidence 456 999999999877776 55677888888999999999998877665432 111 1 1 14678874 57
Q ss_pred HHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCC
Q 014807 139 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLA 217 (418)
Q Consensus 139 ~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~ 217 (418)
++.++ ++.| +|++|++|++|..++ +.|+ |++ +|++++||+||+|+|+..+.++...+.++ ....+.+..+.
T Consensus 210 ~~~~~---~~~g-~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~ad~vi~a~~~~~l~~i~~~p~l~-~~~~~~~~~~~ 281 (431)
T 3k7m_X 210 VDAMS---QEIP-EIRLQTVVTGIDQSG--DVVN-VTVKDGHAFQAHSVIVATPMNTWRRIVFTPALP-ERRRSVIEEGH 281 (431)
T ss_dssp HHHHH---TTCS-CEESSCCEEEEECSS--SSEE-EEETTSCCEEEEEEEECSCGGGGGGSEEESCCC-HHHHHHHHHCC
T ss_pred HHHHH---hhCC-ceEeCCEEEEEEEcC--CeEE-EEECCCCEEEeCEEEEecCcchHhheeeCCCCC-HHHHHHHHhCC
Confidence 76665 3446 999999999999876 4454 666 56679999999999999998775444442 44455677777
Q ss_pred CccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHHHh
Q 014807 218 SIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSYLS 297 (418)
Q Consensus 218 ~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~el~~~~~~~L~ 297 (418)
+...+++.+.+++++. . +++........+++.... . .++.++.. +...+.+...++ +.+.+.|+
T Consensus 282 ~~~~~kv~~~~~~~~~---~---i~~~~d~~~~~~~~~~~~----~-~~~~~l~~-~~~g~~~~~~~~----~~~~~~l~ 345 (431)
T 3k7m_X 282 GGQGLKILIHVRGAEA---G---IECVGDGIFPTLYDYCEV----S-ESERLLVA-FTDSGSFDPTDI----GAVKDAVL 345 (431)
T ss_dssp CCCEEEEEEEEESCCT---T---EEEEBSSSSSEEEEEEEC----S-SSEEEEEE-EEETTTCCTTCH----HHHHHHHH
T ss_pred CcceEEEEEEECCCCc---C---ceEcCCCCEEEEEeCcCC----C-CCCeEEEE-EeccccCCCCCH----HHHHHHHH
Confidence 7778899999987753 1 222222222223443311 0 23334433 333333333333 24567788
Q ss_pred hhhcCCCCceeeeeeEEEcCCC------ccccCCCCC-CCCCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHH
Q 014807 298 KCIKDFSTATVMDHKIRRFPKS------LTHFFPGSY-KYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANR 370 (418)
Q Consensus 298 ~~~p~~~~~~~~~~~v~r~~~a------~~~~~pg~~-~~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~ 370 (418)
+++|+.. ++....++|... +..+.||.. ..++.+..|.++|||||+++...+. ++|+||+.||.+||++
T Consensus 346 ~~~~~~~---~~~~~~~~W~~d~~~~G~~~~~~~g~~~~~~~~l~~p~g~~~fAGe~t~~~~~-g~~~GA~~sg~raa~~ 421 (431)
T 3k7m_X 346 YYLPEVE---VLGIDYHDWIADPLFEGPWVAPRVGQFSRVHKELGEPAGRIHFVGSDVSLEFP-GYIEGALETAECAVNA 421 (431)
T ss_dssp HHCTTCE---EEEEECCCTTTCTTTSSSSCCCCTTTTTTSSGGGGSCBTTEEECSGGGCSSST-TSHHHHHHHHHHHHHH
T ss_pred HhcCCCC---ccEeEecccCCCCCCCCCCCCcCCCCCcccHHHHhCCCCcEEEEehhhhccCC-eEehHHHHHHHHHHHH
Confidence 8898652 555556677432 233456653 3345556788999999998643333 7999999999999999
Q ss_pred HHHH
Q 014807 371 VVDY 374 (418)
Q Consensus 371 Il~~ 374 (418)
|+..
T Consensus 422 i~~~ 425 (431)
T 3k7m_X 422 ILHS 425 (431)
T ss_dssp HHHC
T ss_pred HHhh
Confidence 9864
No 18
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.79 E-value=1.9e-18 Score=179.47 Aligned_cols=227 Identities=18% Similarity=0.192 Sum_probs=152.4
Q ss_pred eeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C------CeEEecCEEEEccChhhHHHhh-
Q 014807 128 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI- 199 (418)
Q Consensus 128 ~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~------g~~~~ad~VV~A~p~~~~~~Ll- 199 (418)
..+.||++ .|+++|++ +.+|++|++|++|..++ +.|. |++ + +++++||+||+|+|+.+++++.
T Consensus 394 ~~~~gG~~-~l~~~La~-----~l~I~l~~~V~~I~~~~--~~v~-V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~ 464 (662)
T 2z3y_A 394 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTA--SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 464 (662)
T ss_dssp EEETTCTT-HHHHHHTT-----TCEEETTEEEEEEEEET--TEEE-EEEEESSCTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred eeecCcHH-HHHHHHHh-----cCceecCCeEEEEEECC--CcEE-EEEeecccCCCCeEEEeCEEEECCCHHHHhcccC
Confidence 35679975 68888864 56899999999999987 3453 554 3 4689999999999999998742
Q ss_pred ---cccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCC------CccceeeeccccccccCCCCCeEE
Q 014807 200 ---KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVI 270 (418)
Q Consensus 200 ---~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~s~~~~~~~~~~~~~l 270 (418)
..+.++ ....++++++.+.++.+|.+.|++++|.. ... .+|... ...+.+++.+ +..++
T Consensus 465 ~i~f~P~LP-~~k~~Ai~~l~~g~~~KV~l~f~~~fW~~-~~~-~~G~l~~~~~~~~~~~~~~~~~---------~~~vL 532 (662)
T 2z3y_A 465 AVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY---------KAPIL 532 (662)
T ss_dssp SSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCS-EEEECCSSSTTTTEEEEEECCS---------SSSEE
T ss_pred ceEEcCCCC-HHHHHHHHhCCccceeEEEEEcCcccccC-CCC-ceeeecCCCCCCCceeEEEeCC---------CCCEE
Confidence 223342 44456788999999999999999998743 212 223211 1111122211 22344
Q ss_pred EEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCC------ccccCCCCCCC------C-----
Q 014807 271 QADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------M----- 331 (418)
Q Consensus 271 ~~~~~~--~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a------~~~~~pg~~~~------r----- 331 (418)
...+.+ +..+..++++++++.++++|.++|+.....++....+.+|... +..+.||+... .
T Consensus 533 ~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~~dp~~~Gsys~~~pg~~~~~~~~l~~p~~~~ 612 (662)
T 2z3y_A 533 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 612 (662)
T ss_dssp EEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTTTCTTTSSSCEECBTTCCTHHHHHHHCCBCC-
T ss_pred EEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEECCCCCCCcccccCCCCCchhhHHHHhCcCccc
Confidence 333332 2345678999999999999999998643235677778889764 22334554321 1
Q ss_pred ---CCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 332 ---MRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 332 ---~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
|...++.++|||||+++...+. ++|+||+.||.+||++|++.++
T Consensus 613 ~~~~~~~~~~grl~FAGe~ts~~~~-g~v~GAi~SG~raA~~i~~~~~ 659 (662)
T 2z3y_A 613 PSIPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFL 659 (662)
T ss_dssp --------CCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccccCCCCcEEEEeccccCCCC-cCHHHHHHHHHHHHHHHHHHcc
Confidence 1123456899999999643233 7999999999999999999876
No 19
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.79 E-value=1.1e-18 Score=175.26 Aligned_cols=233 Identities=12% Similarity=0.129 Sum_probs=154.8
Q ss_pred ceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC---eEEecCEEEEccChhhHHHhhcc
Q 014807 126 DLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGISTLQELIKN 201 (418)
Q Consensus 126 ~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g---~~~~ad~VV~A~p~~~~~~Ll~~ 201 (418)
.+.+++||+ +.|++.|++.+.+ ++|++|++|++|..++ ++|+ |++ +| +++.||+||+|+|+..+.+|..+
T Consensus 230 ~~~~~~gG~-~~l~~~l~~~l~~--~~i~~~~~V~~i~~~~--~~v~-v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~~ 303 (489)
T 2jae_A 230 MMFTPVGGM-DRIYYAFQDRIGT--DNIVFGAEVTSMKNVS--EGVT-VEYTAGGSKKSITADYAICTIPPHLVGRLQNN 303 (489)
T ss_dssp SEEEETTCT-THHHHHHHHHHCG--GGEETTCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECSCHHHHTTSEEC
T ss_pred cEEeecCCH-HHHHHHHHHhcCC--CeEEECCEEEEEEEcC--CeEE-EEEecCCeEEEEECCEEEECCCHHHHHhCccC
Confidence 345688997 4699999988743 7899999999999887 5564 554 44 57999999999999998887652
Q ss_pred cccCChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceec----cCCCccceeeeccccccccCCCCCeEEEEEeec-
Q 014807 202 SILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSG----FGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH- 276 (418)
Q Consensus 202 ~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~- 276 (418)
+ ++...+.++.+++.++.++++.|+++++.... . ++| .+.+.....++ +.. ...+.+.++.....+
T Consensus 304 --l-~~~~~~~l~~~~~~~~~kv~l~~~~~~w~~~~-~-~~g~~~~~~~~~~~~~~~-s~~---~~~~~~~l~~~~~~g~ 374 (489)
T 2jae_A 304 --L-PGDVLTALKAAKPSSSGKLGIEYSRRWWETED-R-IYGGASNTDKDISQIMFP-YDH---YNSDRGVVVAYYSSGK 374 (489)
T ss_dssp --C-CHHHHHHHHTEECCCEEEEEEEESSCHHHHTT-C-CCSCEEEESSTTCEEECC-SSS---TTSSCEEEEEEEEETH
T ss_pred --C-CHHHHHHHHhCCCccceEEEEEeCCCCccCCC-C-cccccccCCCCceEEEeC-CCC---CCCCCCEEEEEeeCCc
Confidence 3 24556778888999999999999987652211 1 111 11122221222 211 111233443322222
Q ss_pred -CCCCCCCCHHHHHHHHHHHHhhhhcC-CCCceeeeeeEEEcCCCccc------cC------CCCCC-CCCCCCCCCCCE
Q 014807 277 -ANELMPLKDDQVVAKAVSYLSKCIKD-FSTATVMDHKIRRFPKSLTH------FF------PGSYK-YMMRGFTSFPNL 341 (418)
Q Consensus 277 -~~~~~~~~~~el~~~~~~~L~~~~p~-~~~~~~~~~~v~r~~~a~~~------~~------pg~~~-~r~~~~~~~~~l 341 (418)
...|..++++++.+.++++|++++|. +.. ++....+.+|.+..+. +. ||... .++...++.+||
T Consensus 375 ~~~~~~~~~~~~~~~~~l~~L~~~~~~~~~~-~~~~~~~~~W~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 453 (489)
T 2jae_A 375 RQEAFESLTHRQRLAKAIAEGSEIHGEKYTR-DISSSFSGSWRRTKYSESAWANWAGSGGSHGGAATPEYEKLLEPVDKI 453 (489)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHHCGGGGS-SEEEEEEEEGGGSTTTSCSSCEETTC-------CCHHHHHHTSCBTTE
T ss_pred hhhhhhcCCHHHHHHHHHHHHHHHcCcchhh-hccccEEEEcCCCCCCCCcchhcccccCCCcccchhhHHHHhCCCCcE
Confidence 23466788999999999999999997 543 4666667788665221 11 22211 112234678999
Q ss_pred EEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 342 FMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 342 ~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
||||+++. ..+ ++|+||+.||++||++|++.+.
T Consensus 454 ~faG~~~~-~~~-~~v~gAi~sg~~aA~~i~~~l~ 486 (489)
T 2jae_A 454 YFAGDHLS-NAI-AWQHGALTSARDVVTHIHERVA 486 (489)
T ss_dssp EECSGGGB-SST-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeEHHhc-cCc-cHHHHHHHHHHHHHHHHHHHHh
Confidence 99999953 233 6999999999999999998764
No 20
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.78 E-value=3.8e-18 Score=179.82 Aligned_cols=228 Identities=18% Similarity=0.197 Sum_probs=155.0
Q ss_pred eeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C------CeEEecCEEEEccChhhHHHhh-
Q 014807 128 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G------KETYSAGAVVLAVGISTLQELI- 199 (418)
Q Consensus 128 ~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~------g~~~~ad~VV~A~p~~~~~~Ll- 199 (418)
..+.||++ .|+++|++ +.+|++|++|++|..++ +.|. |++ + +++++||+||+|+|+.++++++
T Consensus 565 ~~~~gG~~-~L~~aLa~-----~l~I~Lnt~V~~I~~~~--~gV~-V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~ 635 (852)
T 2xag_A 565 LTVRNGYS-CVPVALAE-----GLDIKLNTAVRQVRYTA--SGCE-VIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPP 635 (852)
T ss_dssp EEETTCTT-HHHHHHTT-----TCCEECSEEEEEEEEET--TEEE-EEEEESSSTTCEEEEEESEEEECCCHHHHHCSSC
T ss_pred EEecCcHH-HHHHHHHh-----CCCEEeCCeEEEEEEcC--CcEE-EEEeecccCCCCeEEECCEEEECCCHHHHHhhhc
Confidence 35689985 69888875 35799999999999987 4453 554 3 4689999999999999998742
Q ss_pred ---cccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCC------CccceeeeccccccccCCCCCeEE
Q 014807 200 ---KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGD------SLAWTFFDLNKIYDEHKDDSATVI 270 (418)
Q Consensus 200 ---~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~------~~~~~~~d~s~~~~~~~~~~~~~l 270 (418)
..+.++ ....++++.+.+.++.+|+|.|++++|.. ... .+|+.. ...+.+++.+ +..++
T Consensus 636 ~I~F~P~LP-~~k~~AI~~l~~g~v~KV~L~F~~~fW~~-~~~-~fG~l~~~~~~~~~l~~~~~~~---------~~pvL 703 (852)
T 2xag_A 636 AVQFVPPLP-EWKTSAVQRMGFGNLNKVVLCFDRVFWDP-SVN-LFGHVGSTTASRGELFLFWNLY---------KAPIL 703 (852)
T ss_dssp SSEEESCCC-HHHHHHHHHSEECCCEEEEEECSSCCSCT-TCC-EEEECCSSSTTTTTTCEEEECS---------SSSEE
T ss_pred ccccCCCCC-HHHHHHHHcCCccceEEEEEEcCCcccCC-CCC-eeeeeccccCCCCceEEEecCC---------CCCEE
Confidence 223332 34456788899999999999999988743 211 233211 1112233321 12244
Q ss_pred EEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCC------ccccCCCCCCC------------
Q 014807 271 QADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKS------LTHFFPGSYKY------------ 330 (418)
Q Consensus 271 ~~~~~~--~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a------~~~~~pg~~~~------------ 330 (418)
...+.+ +..+..++++++++.++++|.++|+.....++....+.+|... +..+.||+...
T Consensus 704 l~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~~dp~s~GsYs~~~pG~~~~~~~~L~~P~~~~ 783 (852)
T 2xag_A 704 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSGNDYDLMAQPITPG 783 (852)
T ss_dssp EEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTTTCTTTSSSCEECBTTCCTTHHHHTTSCBCCC
T ss_pred EEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecCCCCCcCccccccCCCcchhhHHHHhCccccc
Confidence 332322 2345678999999999999999998643235677778889764 23344564321
Q ss_pred --CCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 331 --MMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 331 --r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
++....+.++|||||+++...+. ++|+||+.||.+||++|++.+..
T Consensus 784 ~~~p~~~~~~grL~FAGE~Ts~~~~-gtveGAi~SG~RAA~~Il~~l~~ 831 (852)
T 2xag_A 784 PSIPGAPQPIPRLFFAGEHTIRNYP-ATVHGALLSGLREAGRIADQFLG 831 (852)
T ss_dssp CSSTTCCCCCCCEEECSGGGCTTST-TSHHHHHHHHHHHHHHHHHHHHC
T ss_pred cccccccCCCCcEEEEehhHhCCCC-cCHHHHHHHHHHHHHHHHHHhhC
Confidence 11223456899999999643233 79999999999999999998864
No 21
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.71 E-value=2.8e-17 Score=172.12 Aligned_cols=229 Identities=16% Similarity=0.164 Sum_probs=148.4
Q ss_pred eeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHh--hccccc
Q 014807 128 VWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQEL--IKNSIL 204 (418)
Q Consensus 128 ~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~L--l~~~~~ 204 (418)
....+|+ +.+++.|++ |++|++|++|++|..++ +.|. |++ +|+++.||+||+|+|+..+++. ...+.+
T Consensus 527 ~~~~~G~-~~l~~aLa~-----gl~I~l~t~V~~I~~~~--~~v~-V~~~~G~~i~Ad~VIvA~P~~vL~~~~i~f~P~L 597 (776)
T 4gut_A 527 TLLTPGY-SVIIEKLAE-----GLDIQLKSPVQCIDYSG--DEVQ-VTTTDGTGYSAQKVLVTVPLALLQKGAIQFNPPL 597 (776)
T ss_dssp EECTTCT-HHHHHHHHT-----TSCEESSCCEEEEECSS--SSEE-EEETTCCEEEESEEEECCCHHHHHTTCSEEESCC
T ss_pred EEECChH-HHHHHHHHh-----CCcEEcCCeeEEEEEcC--CEEE-EEECCCcEEEcCEEEECCCHHHHhhcccccCCCC
Confidence 4567886 457777653 67999999999999877 4464 665 5778999999999999998752 222333
Q ss_pred CChHHHHHhcCCCCccEEEEEEEeccCCCCCC-CCcceeccCCC----cc--ceeeeccccccccCCCCCeEEEEEeec-
Q 014807 205 CNREEFLKVLNLASIDVVSVKLWFDKKVTVPN-VSNACSGFGDS----LA--WTFFDLNKIYDEHKDDSATVIQADFYH- 276 (418)
Q Consensus 205 ~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~-~~~~~~~~~~~----~~--~~~~d~s~~~~~~~~~~~~~l~~~~~~- 276 (418)
+ ....+.+..+.+.++.++.+.|++++|... ....+++.... .+ ..+++.+ ...+..++...+.+
T Consensus 598 p-~~~~~ai~~l~~g~~~KV~l~f~~~FW~~~~~g~~~fG~l~~~~~~~~~~~~~~d~~------p~g~~~vL~~~i~G~ 670 (776)
T 4gut_A 598 S-EKKMKAINSLGAGIIEKIALQFPYRFWDSKVQGADFFGHVPPSASKRGLFAVFYDMD------PQKKHSVLMSVIAGE 670 (776)
T ss_dssp C-HHHHHHHHHEEEECCEEEEEECSSCTTHHHHTTCSEEEECCSSGGGTTEEEEEEESC------TTSCSCEEEEEECTH
T ss_pred C-HHHHHHHHhCCCeeEEEEEEecCcccccccCCCCceEEeecCCcCCCceEEEEecCC------CCCCceEEEEEecch
Confidence 2 445567888888888999999999887421 00112222110 11 1123322 11123444443332
Q ss_pred -CCCCCCCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCcc------ccCCCCCC-CCCCCCCC-CCCEEEeccc
Q 014807 277 -ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLT------HFFPGSYK-YMMRGFTS-FPNLFMAGDW 347 (418)
Q Consensus 277 -~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~------~~~pg~~~-~r~~~~~~-~~~l~laGd~ 347 (418)
+..+..++++++++.++++|.++||......+....+.+|....+ ...+|... ..+....+ .++|||||++
T Consensus 671 ~a~~l~~lsdeel~~~~l~~L~~ifg~~~~~~P~~~~vt~W~~dp~s~Gsys~~~~g~~~~~~~~L~~p~~grL~FAGE~ 750 (776)
T 4gut_A 671 AVASVRTLDDKQVLQQCMATLRELFKEQEVPDPTKYFVTRWSTDPWIQMAYSFVKTGGSGEAYDIIAEDIQGTVFFAGEA 750 (776)
T ss_dssp HHHHHHTSCHHHHHHHHHHHHHHHTTTSCCCCCSEEEECCGGGCTTTCCSEEEEBTTCCTHHHHHHHCCBTTTEEECSGG
T ss_pred hHHHHHcCCHHHHHHHHHHHHHHHhCcccccCcceEEEecCCCCCccCCCCCccCCCCchhHHHHHhCcCCCcEEEEehh
Confidence 234567899999999999999999864323566677778855321 22234321 11112234 3789999999
Q ss_pred cccCCCccchHHHHHHHHHHHHHHHH
Q 014807 348 ITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 348 ~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
++..++ ++|+||+.||.+||++|++
T Consensus 751 Ts~~~~-gtveGAi~SG~RaA~~Ila 775 (776)
T 4gut_A 751 TNRHFP-QTVTGAYLSGVREASKIAA 775 (776)
T ss_dssp GCSSSC-SSHHHHHHHHHHHHHHHHC
T ss_pred hcCCCC-cCHHHHHHHHHHHHHHHHh
Confidence 753333 7999999999999999974
No 22
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.69 E-value=7.5e-17 Score=158.84 Aligned_cols=275 Identities=13% Similarity=0.135 Sum_probs=164.0
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHH-HhhcCCCcceeeecCCcchhhHHHHHHH
Q 014807 67 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFI-ILAHQKNFDLVWCRGTLREKIFEPWMDS 145 (418)
Q Consensus 67 ~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~-~~~~~~~~~~~~~~gG~~~~l~~~l~~~ 145 (418)
.+++|+.+|+++++.+ .+.+.+..|++.+.++ +++++|+..++..+... +.....+. ...+.||+ +.+++.|.+.
T Consensus 140 ~~~~s~~~~l~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~g~-~~l~~~l~~~ 215 (424)
T 2b9w_A 140 DLMLPFDEFLALNGCE-AARDLWINPFTAFGYG-HFDNVPAAYVLKYLDFVTMMSFAKGD-LWTWADGT-QAMFEHLNAT 215 (424)
T ss_dssp GGGSBHHHHHHHTTCG-GGHHHHTTTTCCCCCC-CTTTSBHHHHHHHSCHHHHHHHHHTC-CBCCTTCH-HHHHHHHHHH
T ss_pred hhccCHHHHHHhhCcH-HHHHHHHHHHHhhccC-ChHhcCHHHHHHhhhHhhhhcccCCc-eEEeCChH-HHHHHHHHHh
Confidence 4578999999998776 4677777888876665 67889987765443221 00100011 13467897 5699999876
Q ss_pred HHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEEE
Q 014807 146 MRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVK 225 (418)
Q Consensus 146 l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~ 225 (418)
+ +.+|++|++|++|..++ +++. |+++++++.||+||+|+|++.+.++++.. +...+.+..+.+.+.. +.
T Consensus 216 l---~~~v~~~~~V~~i~~~~--~~v~-v~~~~g~~~ad~Vv~a~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~-~~ 284 (424)
T 2b9w_A 216 L---EHPAERNVDITRITRED--GKVH-IHTTDWDRESDVLVLTVPLEKFLDYSDAD----DDEREYFSKIIHQQYM-VD 284 (424)
T ss_dssp S---SSCCBCSCCEEEEECCT--TCEE-EEESSCEEEESEEEECSCHHHHTTSBCCC----HHHHHHHTTCEEEEEE-EE
T ss_pred h---cceEEcCCEEEEEEEEC--CEEE-EEECCCeEEcCEEEECCCHHHHhhccCCC----HHHHHHHhcCCcceeE-EE
Confidence 5 46899999999999876 4564 77765569999999999999887766432 3334455666665533 23
Q ss_pred EEeccCCCCCCCCcceeccC--C-CccceeeeccccccccCCCCCeEEEEEee-cCCCCCCCCHHHHHHHHHHHHhhhhc
Q 014807 226 LWFDKKVTVPNVSNACSGFG--D-SLAWTFFDLNKIYDEHKDDSATVIQADFY-HANELMPLKDDQVVAKAVSYLSKCIK 301 (418)
Q Consensus 226 l~~~~~~~~~~~~~~~~~~~--~-~~~~~~~d~s~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~el~~~~~~~L~~~~p 301 (418)
+.+..... . +..+++.. . ..++.+++....+ +....++..... ....+.+.+++++.+.++++|.++.+
T Consensus 285 ~~~~~~~~--~-~~~~~~~~~~~~~~g~~~~~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~ 357 (424)
T 2b9w_A 285 ACLVKEYP--T-ISGYVPDNMRPERLGHVMVYYHRWA----DDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGH 357 (424)
T ss_dssp EEEESSCC--S-SEEECGGGGSGGGTTSCCEEEECCT----TCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTC
T ss_pred EEEeccCC--c-ccccccCCCCCcCCCcceEEeeecC----CCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCC
Confidence 33333221 1 11122111 0 1223333323221 112233322222 22445667889999999999999544
Q ss_pred CCCCceeeeeeEEEcCC----CccccCCCCCCCCCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHH
Q 014807 302 DFSTATVMDHKIRRFPK----SLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 372 (418)
Q Consensus 302 ~~~~~~~~~~~v~r~~~----a~~~~~pg~~~~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il 372 (418)
... .++. ...|.. +.+.+..|+... ....++.+|+||||+| +++ +.+|+|+.||.+||++|+
T Consensus 358 ~~~--~~~~--~~~w~~~p~~~~~~~~~G~~~~-~~~~~~~~~l~~aG~~--~~~--g~~e~a~~Sg~~aA~~~l 423 (424)
T 2b9w_A 358 PVE--KIIE--EQTWYYFPHVSSEDYKAGWYEK-VEGMQGRRNTFYAGEI--MSF--GNFDEVCHYSKDLVTRFF 423 (424)
T ss_dssp CEE--EEEE--EEEEEEEEECCHHHHHTTHHHH-HHHTTTGGGEEECSGG--GSC--SSHHHHHHHHHHHHHHHT
T ss_pred ccc--cccc--ccceeeeeccCHHHHhccHHHH-HHHHhCCCCceEeccc--ccc--ccHHHHHHHHHHHHHHhc
Confidence 321 2222 112321 112233343221 1112456799999999 455 479999999999999885
No 23
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.69 E-value=1.9e-16 Score=159.95 Aligned_cols=291 Identities=12% Similarity=0.094 Sum_probs=161.4
Q ss_pred cCCccHHHHHHHh------CCCHHHHHHHHHHHH---HhhhcCChhhhHHHHHHHHHHHHHhhcCCCcceeeecCCcchh
Q 014807 67 YDSITARELFKQF------GCSERLYRNVIGPLV---QVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREK 137 (418)
Q Consensus 67 ~d~~s~~e~l~~~------~~~~~~~~~~~~p~~---~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~ 137 (418)
.+++|+.+|+.++ .+++.. ..++.+++ ...++.+++++|+..++ .... + ...++.| + +.
T Consensus 136 ~~d~s~~~~l~~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~g~~~~~~s~~~~~-------~~~~-~-~~~~~~g-~-~~ 203 (516)
T 1rsg_A 136 VSDCSFFQLVMKYLLQRRQFLTNDQ-IRYLPQLCRYLELWHGLDWKLLSAKDTY-------FGHQ-G-RNAFALN-Y-DS 203 (516)
T ss_dssp --CCBHHHHHHHHHHHHGGGSCHHH-HHHHHHHHGGGHHHHTBCTTTSBHHHHC-------CCCS-S-CCEEESC-H-HH
T ss_pred CCCCCHHHHHHHHHHHhhcccCHHH-HHHHHHHHHHHHHHhCCChHHCChHHHH-------hhcc-C-cchhhhC-H-HH
Confidence 5679999998753 122221 12233322 23345667777765431 1111 1 1134566 5 56
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhHHHh-----------hcccccC
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTLQEL-----------IKNSILC 205 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~~~L-----------l~~~~~~ 205 (418)
|++.|++.+. +++|++|++|++|..+++ +.| .|++ +|+++.||+||+|+|+..+... --.+.+
T Consensus 204 l~~~l~~~l~--~~~i~~~~~V~~I~~~~~-~~v-~v~~~~g~~~~ad~VI~t~p~~~l~~~~~~~~~~~~~i~f~P~L- 278 (516)
T 1rsg_A 204 VVQRIAQSFP--QNWLKLSCEVKSITREPS-KNV-TVNCEDGTVYNADYVIITVPQSVLNLSVQPEKNLRGRIEFQPPL- 278 (516)
T ss_dssp HHHHHHTTSC--GGGEETTCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCCHHHHHGGGSSCSCSTTCCEEESCC-
T ss_pred HHHHHHHhCC--CCEEEECCEEEEEEEcCC-CeE-EEEECCCcEEECCEEEECCCHHHhhhccccccccccceEecCCC-
Confidence 8888887664 368999999999998642 334 5666 5678999999999999998743 112233
Q ss_pred ChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCCCcc-c-eeeecc-----------------------cccc
Q 014807 206 NREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLA-W-TFFDLN-----------------------KIYD 260 (418)
Q Consensus 206 ~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-~-~~~d~s-----------------------~~~~ 260 (418)
+....++++++.+.++.++++.|++++|.... ..+.+...... . ..++.+ ...+
T Consensus 279 p~~~~~ai~~~~~~~~~Kv~l~f~~~fW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (516)
T 1rsg_A 279 KPVIQDAFDKIHFGALGKVIFEFEECCWSNES-SKIVTLANSTNEFVEIVRNAENLDELDSMLEREDSQKHTSVTCWSQP 357 (516)
T ss_dssp CHHHHHHTTSSCCCCCEEEEEEESSCCSCCSC-SEEEECCCCCHHHHHHHHHCCSHHHHHHHC---------CCCTTSSC
T ss_pred CHHHHHHHHhCCCCcceEEEEEeCCCCCCCCC-CcEEEeCCCCccchhhcccCcccchhhhcccccccccccccccccCc
Confidence 24556788999999999999999999874321 11221111000 0 000000 0000
Q ss_pred c-----cCCCCCeEEEEEeecC--CCCCCC--CHHHHHHH---HHHHHhhhhc------CCCC---------ceeeeeeE
Q 014807 261 E-----HKDDSATVIQADFYHA--NELMPL--KDDQVVAK---AVSYLSKCIK------DFST---------ATVMDHKI 313 (418)
Q Consensus 261 ~-----~~~~~~~~l~~~~~~~--~~~~~~--~~~el~~~---~~~~L~~~~p------~~~~---------~~~~~~~v 313 (418)
. +...+..++.....+. ..+..+ +++++.+. ++++|.++|+ +... ..+....+
T Consensus 358 ~~~~~~~~~~~~~~L~~~~~g~~a~~~~~l~~~~~~~~~~~~~~l~~l~~~~g~~~~~~~~~~~~~~~~a~~p~~~~~~~ 437 (516)
T 1rsg_A 358 LFFVNLSKSTGVASFMMLMQAPLTNHIESIREDKERLFSFFQPVLNKIMKCLDSEDVIDGMRPIENIANANKPVLRNIIV 437 (516)
T ss_dssp EEEEEHHHHTSCSEEEEEECBTHHHHHHHTTTCHHHHHHHHHHHHHHHHHHTTCCCCEECCC-------CCSCEEEEEEE
T ss_pred eeEEEeeecCCCcEEEEEecchHHHHHHhcCCCHHHHHHHHHHHHHHHHhhccccccccCCCCcccccccCCCccceEEE
Confidence 0 0001233433322221 123344 77887654 5555655553 3221 11125555
Q ss_pred EEcCCCc------cccCCCCCCC--CCCC-CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 314 RRFPKSL------THFFPGSYKY--MMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 314 ~r~~~a~------~~~~pg~~~~--r~~~-~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.+|...- ..+.||.... .... ..+.++|||||+++...+. ++|+||+.||.+||++|++.++
T Consensus 438 ~~W~~dp~~~Gsys~~~~g~~~~~~~~~l~~~~~~rl~FAGe~ts~~~~-g~v~GA~~SG~raA~~i~~~~~ 508 (516)
T 1rsg_A 438 SNWTRDPYSRGAYSACFPGDDPVDMVVAMSNGQDSRIRFAGEHTIMDGA-GCAYGAWESGRREATRISDLLK 508 (516)
T ss_dssp CCTTTCTTTTTCCCCCBC----CHHHHHHHHCSSSSEEECSTTSCSTTB-TSHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCCCCCCCCccCCCcCCCCCHHHHHHHhccCCCCcEEEeccccccCCC-ccchhHHHHHHHHHHHHHHHhh
Confidence 6774432 1233443211 0111 1356899999999642222 8999999999999999998875
No 24
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.67 E-value=5.8e-17 Score=166.59 Aligned_cols=307 Identities=11% Similarity=0.023 Sum_probs=173.4
Q ss_pred hhcCCccH---HHHHHHh-CCCHHHHHHHHHHHHHhhhc-CChhhhHHHHHHHHHHHHHhhcCCCcceeeecCCcchhhH
Q 014807 65 RKYDSITA---RELFKQF-GCSERLYRNVIGPLVQVGLF-APAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIF 139 (418)
Q Consensus 65 ~~~d~~s~---~e~l~~~-~~~~~~~~~~~~p~~~~~~~-~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~ 139 (418)
.++|++|+ .+|+++. .++ ... .++.-+..+..+ .+....|...++... + ... ......+.||+ +.|+
T Consensus 279 ~~~d~~S~~~~~~~L~~~~~~s-~~~-~~~~~~~~~~gg~~~~~~~S~le~L~~~---~-~~~-~~~~~~i~GG~-~~L~ 350 (721)
T 3ayj_A 279 VAFEKGTLPPVDGVLDVDESIS-YYV-ELFGRFGFGTGGFKPLYNISLVEMMRLI---L-WDY-SNEYTLPVTEN-VEFI 350 (721)
T ss_dssp HHHHHTSSCCGGGTSCHHHHHH-HHH-HHHHHHCSSSSCCGGGTTBBHHHHHHHH---H-TTT-TCEECCSSSST-HHHH
T ss_pred HhhcccchhHHHHHHHhccccH-HHH-HHHHHHhhccCCCCCccchhHHHHHHHH---h-cCC-ccceeEECCcH-HHHH
Confidence 34677777 7777531 122 212 222222222222 233466666554443 1 211 23345678996 6799
Q ss_pred HHHHHHHHhcCcEEEcCceee--EEEecCCCC------eEEEE-EE-CCe--EEecCEEEEccChhhHHHhh-----c--
Q 014807 140 EPWMDSMRTRGCEFLDGRRVT--DFIYDEERC------CISDV-VC-GKE--TYSAGAVVLAVGISTLQELI-----K-- 200 (418)
Q Consensus 140 ~~l~~~l~~~G~~I~l~t~V~--~I~~~~~~g------~v~~v-~~-~g~--~~~ad~VV~A~p~~~~~~Ll-----~-- 200 (418)
++|++.+.+ |+.|++|++|+ +|..+++ + .|+ | .. +|+ +++||+||+|+|...+..++ .
T Consensus 351 ~aLa~~l~~-g~~I~l~~~V~~~~I~~~~~-g~~~~~~~V~-V~~~~~G~~~~~~aD~VIvTvP~~~L~~~~~r~~i~~~ 427 (721)
T 3ayj_A 351 RNLFLKAQN-VGAGKLVVQVRQERVANACH-SGTASARAQL-LSYDSHNAVHSEAYDFVILAVPHDQLTPIVSRSGFEHA 427 (721)
T ss_dssp HHHHHHHHH-HTTTSEEEEEECEEEEEEEE-CSSSSCCEEE-EEEETTCCEEEEEESEEEECSCHHHHHHHHSSSCSSCE
T ss_pred HHHHHhccc-CCceEeCCEEEeeeEEECCC-CCccccceEE-EEEecCCceEEEEcCEEEECCCHHHHhhcccccccccc
Confidence 999998743 67899999999 9998764 3 353 4 33 455 78999999999999986422 1
Q ss_pred --------------------ccc-cCC-------hHHHHHhcCCCCccEEEEEEEe-----ccCCCCCCCCc--ceeccC
Q 014807 201 --------------------NSI-LCN-------REEFLKVLNLASIDVVSVKLWF-----DKKVTVPNVSN--ACSGFG 245 (418)
Q Consensus 201 --------------------~~~-~~~-------~~~~~~l~~l~~~~~~~v~l~~-----~~~~~~~~~~~--~~~~~~ 245 (418)
.++ +-+ ....+++++++|.+..++.+.| ++++|...... ...-.+
T Consensus 428 ~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~Kv~l~~~~~~~~~~fW~~~~g~~i~~s~TD 507 (721)
T 3ayj_A 428 ASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSKVFATVKTAALDQPWVPQWRGEPIKAVVSD 507 (721)
T ss_dssp EEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEEEEEEEEGGGGGSTTSCEETTEECCEEEET
T ss_pred ccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceEEEEEEccccCCCCcccccCCCCceeeecC
Confidence 111 101 2345688999999999999999 88877432000 000011
Q ss_pred CCcc-ceeeeccccccccCCCCCeEEEEEeecC---CCC------CCCCHH-------HHHHHHHHHHh--hhhcCCCC-
Q 014807 246 DSLA-WTFFDLNKIYDEHKDDSATVIQADFYHA---NEL------MPLKDD-------QVVAKAVSYLS--KCIKDFST- 305 (418)
Q Consensus 246 ~~~~-~~~~d~s~~~~~~~~~~~~~l~~~~~~~---~~~------~~~~~~-------el~~~~~~~L~--~~~p~~~~- 305 (418)
.++. ..++...+. ..+.+++..++.+.|... ..+ ..++++ ++++.++++|. +++|+...
T Consensus 508 ~~~r~~~~~p~p~~-~d~~~~~~gvlL~sYtwg~dA~~~~~~~g~~~~~~~er~~~~~~~~~~~l~~la~~~~~p~~~~~ 586 (721)
T 3ayj_A 508 SGLAASYVVPSPIV-EDGQAPEYSSLLASYTWEDDSTRLRHDFGLYPQNPATETGTADGMYRTMVNRAYRYVKYAGASNA 586 (721)
T ss_dssp TTTEEEEEEECSCC-----CCSEEEEEEEEEETHHHHHHHTTCCSSSEESSSSSCCCHHHHHHHHHHTCCEECCTTCSSC
T ss_pred CCcceEEEeccCcc-cccCCCCCcEEEEEEeCccchhhhhccccccCCChHHhhhhhhHHHHHHHHHHhhhccCcccccc
Confidence 1111 111110000 011112334444444321 123 233333 44899999999 89987540
Q ss_pred ---------ce--eeeeeEEEcCCC-----ccccCCCCC-------CCC--CCCCCCCCCEEEeccccccCCCccchHHH
Q 014807 306 ---------AT--VMDHKIRRFPKS-----LTHFFPGSY-------KYM--MRGFTSFPNLFMAGDWITTRHGSWSQERS 360 (418)
Q Consensus 306 ---------~~--~~~~~v~r~~~a-----~~~~~pg~~-------~~r--~~~~~~~~~l~laGd~~~~~~g~~~~egA 360 (418)
.+ +.+...+.|... ...+.||+. .+. .....+..+||||||++. ..+ |++|||
T Consensus 587 ~~~~~~~l~~~~~~~~~~~~dW~~dps~Gaf~~~~pgq~~~~~l~~~~~~~~~~~~~~gri~fAGe~~S-~~~-GWieGA 664 (721)
T 3ayj_A 587 QPWWFYQLLAEARTADRFVFDWTTNKTAGGFKLDMTGDHHQSNLCFRYHTHALAASLDNRFFIASDSYS-HLG-GWLEGA 664 (721)
T ss_dssp EECHHHHHHHTSCSTTCEEEEGGGSTTSSSEECCBTTTHHHHHHHHHGGGGGGCTTTCCCEEECSGGGS-SCT-TSHHHH
T ss_pred ccchhhhhhhhcccCceEEEeCCCCCCCCccccCCCccchhhhhhhhhhhhccccCCCCCEEEeehhhc-cCC-ceehHH
Confidence 01 122345567432 123446651 111 112235689999999973 333 689999
Q ss_pred HHHHHHHHHHHHHHhCCCCcccccc
Q 014807 361 YVTGLEAANRVVDYLGDGSFSKIIP 385 (418)
Q Consensus 361 i~SG~~aA~~Il~~~~~~~~~~~~~ 385 (418)
+.||.+||.+|+..++...+.+..+
T Consensus 665 l~Sa~~Aa~~i~~~~~~~~~~~~~~ 689 (721)
T 3ayj_A 665 FMSALNAVAGLIVRANRGDVSALST 689 (721)
T ss_dssp HHHHHHHHHHHHHHHTTTCGGGBCT
T ss_pred HHHHHHHHHHHHHHhcCCCCcccCc
Confidence 9999999999999998666555554
No 25
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.62 E-value=2.1e-14 Score=136.58 Aligned_cols=220 Identities=15% Similarity=0.127 Sum_probs=148.8
Q ss_pred cCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEE-ecCEEEEccChhhHHHhhcccccCChH
Q 014807 131 RGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETY-SAGAVVLAVGISTLQELIKNSILCNRE 208 (418)
Q Consensus 131 ~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~-~ad~VV~A~p~~~~~~Ll~~~~~~~~~ 208 (418)
..|+ +.+.+.+.+ |++|+++++|++|..+++ + + .|++ +|+.+ .||.||+|+|+..+.+++... +.
T Consensus 106 ~~~~-~~l~~~l~~-----g~~i~~~~~v~~i~~~~~-~-~-~v~~~~g~~~~~a~~vV~a~g~~~~~~~~~~~----~~ 172 (336)
T 1yvv_A 106 KPGM-SAITRAMRG-----DMPVSFSCRITEVFRGEE-H-W-NLLDAEGQNHGPFSHVIIATPAPQASTLLAAA----PK 172 (336)
T ss_dssp SSCT-HHHHHHHHT-----TCCEECSCCEEEEEECSS-C-E-EEEETTSCEEEEESEEEECSCHHHHGGGGTTC----HH
T ss_pred CccH-HHHHHHHHc-----cCcEEecCEEEEEEEeCC-E-E-EEEeCCCcCccccCEEEEcCCHHHHHHhhccC----HH
Confidence 3565 346655543 789999999999998773 4 4 4666 45555 489999999999998877542 34
Q ss_pred HHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHH
Q 014807 209 EFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDD 286 (418)
Q Consensus 209 ~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~ 286 (418)
....+..+.|.++.++++.++++.+.+ ...++..+.+..| +++.+..+ ... +.+..+.....+ ...+.+++++
T Consensus 173 l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~-l~~~~~~p-~~~-~~~~~~v~~~~~~~~~~~~~~~~~ 247 (336)
T 1yvv_A 173 LASVVAGVKMDPTWAVALAFETPLQTP--MQGCFVQDSPLDW-LARNRSKP-ERD-DTLDTWILHATSQWSRQNLDASRE 247 (336)
T ss_dssp HHHHHTTCCEEEEEEEEEEESSCCSCC--CCEEEECSSSEEE-EEEGGGST-TCC-CSSEEEEEEECHHHHHHTTTSCHH
T ss_pred HHHHHhhcCccceeEEEEEecCCCCCC--CCeEEeCCCceeE-EEecCcCC-CCC-CCCcEEEEEeCHHHHHHHHhCCHH
Confidence 455678889999999999998876532 2222222334444 45544322 111 111222222211 2346678999
Q ss_pred HHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCCCCCCCEEEeccccccCCCccchHHHHHHHHH
Q 014807 287 QVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLE 366 (418)
Q Consensus 287 el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~ 366 (418)
++.+.+++.+.++++... ..+....+.+|..+++.+..+... .....++|+|||||+ .+ +++++|+.||..
T Consensus 248 ~~~~~l~~~l~~~lg~~~-~~p~~~~~~rw~~a~~~~~~~~~~----~~~~~~rl~laGDa~---~g-~gv~~a~~sg~~ 318 (336)
T 1yvv_A 248 QVIEHLHGAFAELIDCTM-PAPVFSLAHRWLYARPAGAHEWGA----LSDADLGIYVCGDWC---LS-GRVEGAWLSGQE 318 (336)
T ss_dssp HHHHHHHHHHHTTCSSCC-CCCSEEEEEEEEEEEESSCCCCSC----EEETTTTEEECCGGG---TT-SSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCC-CCCcEEEccccCccCCCCCCCCCe----eecCCCCEEEEecCC---CC-CCHHHHHHHHHH
Confidence 999999999999998532 234556788898888777654421 113458999999996 23 489999999999
Q ss_pred HHHHHHHHhCC
Q 014807 367 AANRVVDYLGD 377 (418)
Q Consensus 367 aA~~Il~~~~~ 377 (418)
+|++|.+.+.+
T Consensus 319 lA~~l~~~~~~ 329 (336)
T 1yvv_A 319 AARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHTTC
T ss_pred HHHHHHHHhhh
Confidence 99999999885
No 26
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.50 E-value=1.8e-13 Score=135.14 Aligned_cols=167 Identities=15% Similarity=0.163 Sum_probs=119.0
Q ss_pred CCCCcccccccCCCCCChhhhhhhchhHHHHhhcCCC-hhHHh--hcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcC
Q 014807 24 LPTPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFA 100 (418)
Q Consensus 24 ~p~p~~~~~~l~~~~ls~~dk~~~~~l~~~~~~~~~~-~~~~~--~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~ 100 (418)
++.|.+...+++++.|++.||.++.+++..+.++... +..+. +++++|+.+|++++++++.+++.++.++... ...
T Consensus 141 ~~VPss~~e~~~~~lLs~~eK~~l~kFL~~l~~~~~~~~~~~~~~~l~~~s~~e~l~~~gls~~l~~fl~~alaL~-~~~ 219 (475)
T 3p1w_A 141 HKVPATDMEALVSPLLSLMEKNRCKNFYQYVSEWDANKRNTWDNLDPYKLTMLEIYKHFNLCQLTIDFLGHAVALY-LND 219 (475)
T ss_dssp EECCCSHHHHHTCTTSCHHHHHHHHHHHHHHHHCCTTCGGGSTTCCTTTSBHHHHHHHTTCCHHHHHHHHHHTSCC-SSS
T ss_pred EeCCCCHHHHhhccCCCHHHHHHHHHHHHHHHhhhhccchhhhcccccCCCHHHHHHHcCCCHHHHHHHHHHHHhh-cCC
Confidence 4467775557789999999999999887766654321 22333 2468999999999999999877554443222 122
Q ss_pred ChhhhHHHHHHHHHHHHH--hhcCCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC-
Q 014807 101 PAEQCSAAATLGILYFII--LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG- 177 (418)
Q Consensus 101 ~~~~~Sa~~~~~~l~~~~--~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~- 177 (418)
+..+.++...+..+..+. ++..+.+.+.||+||++ .|+++|++.+++.|++|+++++|++|..+++ |++++|+++
T Consensus 220 ~~~~~~a~~~l~ri~~y~~Sl~~yg~s~~~yp~gG~~-~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~-g~v~gV~~~~ 297 (475)
T 3p1w_A 220 DYLKQPAYLTLERIKLYMQSISAFGKSPFIYPLYGLG-GIPEGFSRMCAINGGTFMLNKNVVDFVFDDD-NKVCGIKSSD 297 (475)
T ss_dssp GGGGSBHHHHHHHHHHHHHHHHHHSSCSEEEETTCTT-HHHHHHHHHHHHC--CEESSCCEEEEEECTT-SCEEEEEETT
T ss_pred CcccCCHHHHHHHHHHHHHHHhhcCCCceEEECCCHH-HHHHHHHHHHHHcCCEEEeCCeEEEEEEecC-CeEEEEEECC
Confidence 344567666655444332 12222456789999986 5999999999999999999999999998333 778899885
Q ss_pred CeEEecCEEEEccChh
Q 014807 178 KETYSAGAVVLAVGIS 193 (418)
Q Consensus 178 g~~~~ad~VV~A~p~~ 193 (418)
|+++.||+||+|.+..
T Consensus 298 G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 298 GEIAYCDKVICDPSYV 313 (475)
T ss_dssp SCEEEEEEEEECGGGC
T ss_pred CcEEECCEEEECCCcc
Confidence 6789999999999754
No 27
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=99.47 E-value=6e-11 Score=120.56 Aligned_cols=188 Identities=12% Similarity=0.090 Sum_probs=125.7
Q ss_pred CCcccccccCCCCCChhhhhhhchhHHHHhhcCCChhHHhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhh
Q 014807 26 TPLGTLFYTQFSRLPLVDRLTSLPLMAAVIDFDNTDVAWRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQC 105 (418)
Q Consensus 26 ~p~~~~~~l~~~~ls~~dk~~~~~l~~~~~~~~~~~~~~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 105 (418)
.|.+...+++++.|++.+|.++.+++..+..+...+..+..++.+|+.+||++++.++.+.+.+...+ +.+..+ ..
T Consensus 271 VPas~~eif~s~~Lsl~EKr~L~kFl~~~~~~~~~p~~~~~~d~~S~~d~L~~~~ls~~L~~~L~~~l--al~~~~--~~ 346 (650)
T 1vg0_A 271 VPCSRADVFNSKQLTMVEKRMLMKFLTFCVEYEEHPDEYRAYEGTTFSEYLKTQKLTPNLQYFVLHSI--AMTSET--TS 346 (650)
T ss_dssp CCCSHHHHHHCSSSCHHHHHHHHHHHHHHHTGGGCHHHHHTTTTSBHHHHHTTSSSCHHHHHHHHHHT--TC--CC--SC
T ss_pred CCCCHHHHHhCcCCCHHHHHHHHHHHHHHHHhccChHHHhhhccCCHHHHHHHhCCCHHHHHHHHHHH--hccCCC--CC
Confidence 45554447788999999999999977766554434445667899999999999989998665554322 333222 12
Q ss_pred HHHHHHHHHHHHH--hhcCCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEe
Q 014807 106 SAAATLGILYFII--LAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYS 182 (418)
Q Consensus 106 Sa~~~~~~l~~~~--~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ 182 (418)
++...+..+..++ ++..+...+.|+.||++ .|+++|++.++..|++|+++++|++|..++++|++++|++ +|+++.
T Consensus 347 pa~~~l~~i~~~l~sl~~yg~sg~~yp~GG~g-~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~ 425 (650)
T 1vg0_A 347 CTVDGLKATKKFLQCLGRYGNTPFLFPLYGQG-ELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRII 425 (650)
T ss_dssp BHHHHHHHHHHHHHHTTSSSSSSEEEETTCTT-HHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEE
T ss_pred chhHHHHHHHHHHHHHHhhccCceEEeCCchh-HHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEE
Confidence 3333322222221 12222235678999986 5999999999999999999999999998763256888886 488999
Q ss_pred cCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEEEEEeccCCC
Q 014807 183 AGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT 233 (418)
Q Consensus 183 ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~ 233 (418)
||+||++. .. ++... ...+.+..+..+.+.+++++.
T Consensus 426 A~~VVs~~--~~----lp~~~---------~~~~~~~~v~R~i~i~~~pi~ 461 (650)
T 1vg0_A 426 SKHFIIED--SY----LSENT---------CSRVQYRQISRAVLITDGSVL 461 (650)
T ss_dssp CSEEEEEG--GG----BCTTT---------TTTCCCEEEEEEEEEESSCSS
T ss_pred cCEEEECh--hh----cCHhH---------hccccccceEEEEEEecCCCC
Confidence 99999932 22 22110 112234556677778887754
No 28
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.47 E-value=1.6e-11 Score=121.66 Aligned_cols=155 Identities=11% Similarity=0.108 Sum_probs=102.1
Q ss_pred ccCCCCCChhhhhhhchhHHHHhhcCCC-hhHHh--hcCCccHHHHHHHhCCCHHHHHHHHHHHHHh----hhcCChhhh
Q 014807 33 YTQFSRLPLVDRLTSLPLMAAVIDFDNT-DVAWR--KYDSITARELFKQFGCSERLYRNVIGPLVQV----GLFAPAEQC 105 (418)
Q Consensus 33 ~l~~~~ls~~dk~~~~~l~~~~~~~~~~-~~~~~--~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~ 105 (418)
.+...++++.+|.++.+++..+.++... +..+. ..+++|+.+|+++++.++.+.+ ++...+.. .|...|...
T Consensus 136 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~l~~~~~~~~~p~~~ 214 (453)
T 2bcg_G 136 AISSPLMGIFEKRRMKKFLEWISSYKEDDLSTHQGLDLDKNTMDEVYYKFGLGNSTKE-FIGHAMALWTNDDYLQQPARP 214 (453)
T ss_dssp HHHCTTSCHHHHHHHHHHHHHHHHCBTTBGGGSTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBHHH
T ss_pred HHhhhccchhhHHHHHHHHHHHHHhccCCchhhhccccccCCHHHHHHHhCCCHHHHH-HHHHHHHhccCccccCCchHH
Confidence 4455677888887777766554443211 11111 2468999999999988888654 43321110 122234333
Q ss_pred HHHHHHHHHHHHHhhcCCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEec--CCCCeEEEEEECCeEEec
Q 014807 106 SAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSA 183 (418)
Q Consensus 106 Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~--~~~g~v~~v~~~g~~~~a 183 (418)
++..+...+... .......+.+|+||++ .|+++|++.+++.|++|++|++|++|..+ + +++++|+++|+++.|
T Consensus 215 ~~~~~~~~~~s~--~~~~~~~~~~p~gG~~-~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~--~~~~~V~~~g~~~~a 289 (453)
T 2bcg_G 215 SFERILLYCQSV--ARYGKSPYLYPMYGLG-ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDT--GKFEGVKTKLGTFKA 289 (453)
T ss_dssp HHHHHHHHHHHH--HHHSSCSEEEETTCTT-HHHHHHHHHHHHTTCEEECSCCCCEEEEETTT--TEEEEEEETTEEEEC
T ss_pred HHHHHHHHHHHH--HhhcCCceEeeCCCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEECCC--CeEEEEEECCeEEEC
Confidence 332222222111 1111233458999975 69999999999999999999999999987 5 777788889999999
Q ss_pred CEEEEccChh
Q 014807 184 GAVVLAVGIS 193 (418)
Q Consensus 184 d~VV~A~p~~ 193 (418)
|+||+|++++
T Consensus 290 d~VV~a~~~~ 299 (453)
T 2bcg_G 290 PLVIADPTYF 299 (453)
T ss_dssp SCEEECGGGC
T ss_pred CEEEECCCcc
Confidence 9999999987
No 29
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.42 E-value=4e-11 Score=118.16 Aligned_cols=157 Identities=10% Similarity=0.095 Sum_probs=105.0
Q ss_pred cCCCCCChhhhhhhchhHHHHhhcCCC-hhH--HhhcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHH
Q 014807 34 TQFSRLPLVDRLTSLPLMAAVIDFDNT-DVA--WRKYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAAT 110 (418)
Q Consensus 34 l~~~~ls~~dk~~~~~l~~~~~~~~~~-~~~--~~~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~ 110 (418)
+...++++.+|.++.+++..+.++... +.. ..+++++|+.+|+++++.++.+.+ ++...+....+.++.+.++...
T Consensus 129 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~s~~~~l~~~~~~~~l~~-~l~~~~~~~~~~~~~~~p~~~~ 207 (433)
T 1d5t_A 129 LASNLMGMFEKRRFRKFLVFVANFDENDPKTFEGVDPQNTSMRDVYRKFDLGQDVID-FTGHALALYRTDDYLDQPCLET 207 (433)
T ss_dssp HHCSSSCHHHHHHHHHHHHHHHHCCTTCGGGGTTCCTTTSBHHHHHHHTTCCHHHHH-HHHHHTSCCSSSGGGGSBSHHH
T ss_pred hhCcccChhhHHHHHHHHHHHHhhcccCchhccccccccCCHHHHHHHcCCCHHHHH-HHHHHHHhccCCCccCCCHHHH
Confidence 345566776777776665554443211 111 113578999999999888888554 4333222222234555555433
Q ss_pred HHHHHHHHh--hcCCCcceeeecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEE
Q 014807 111 LGILYFIIL--AHQKNFDLVWCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVL 188 (418)
Q Consensus 111 ~~~l~~~~~--~~~~~~~~~~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~ 188 (418)
+..+..+.. +..+...+.+++||++ .|+++|++.+++.|++|++|++|++|..++ +++++|..+|+++.||+||+
T Consensus 208 ~~~~~~~~~s~~~~g~~~~~~p~gG~~-~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~--~~v~~v~~~g~~~~ad~VV~ 284 (433)
T 1d5t_A 208 INRIKLYSESLARYGKSPYLYPLYGLG-ELPQGFARLSAIYGGTYMLNKPVDDIIMEN--GKVVGVKSEGEVARCKQLIC 284 (433)
T ss_dssp HHHHHHHHHSCCSSSCCSEEEETTCTT-HHHHHHHHHHHHHTCCCBCSCCCCEEEEET--TEEEEEEETTEEEECSEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEeCcCHH-HHHHHHHHHHHHcCCEEECCCEEEEEEEeC--CEEEEEEECCeEEECCEEEE
Confidence 333322221 1111233568999975 699999999999999999999999999877 67877888999999999999
Q ss_pred ccChhh
Q 014807 189 AVGIST 194 (418)
Q Consensus 189 A~p~~~ 194 (418)
|++++.
T Consensus 285 a~~~~~ 290 (433)
T 1d5t_A 285 DPSYVP 290 (433)
T ss_dssp CGGGCG
T ss_pred CCCCCc
Confidence 999874
No 30
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.36 E-value=8.2e-14 Score=134.40 Aligned_cols=133 Identities=12% Similarity=0.020 Sum_probs=96.9
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhHHHHHH
Q 014807 67 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMD 144 (418)
Q Consensus 67 ~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~~~gG~~~~l~~~l~~ 144 (418)
.+++|+++|+.++ +++++++.++.|++.++++.+++++|+..+..+.......+.. ...+ ++|+||+ ..|+++|++
T Consensus 126 ~~~~s~~~~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 203 (367)
T 1i8t_A 126 KVPENLEEQAISL-VGEDLYQALIKGYTEKQWGRSAKELPAFIIKRIPVRFTFDNNYFSDRYQGIPVGGY-TKLIEKMLE 203 (367)
T ss_dssp CCCCSHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSCTTSSCCCCBCSSSCCCSCCCSEEECBTTCH-HHHHHHHHT
T ss_pred CCCccHHHHHHHH-HhHHHHHHHHHHHHhhhhCCChHHcCHHHHhhceeeeccccccccchhhcccCCCH-HHHHHHHhc
Confidence 4789999999996 8899999999999999999999999986542110000001110 1123 4899997 468888875
Q ss_pred HHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEE
Q 014807 145 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSV 224 (418)
Q Consensus 145 ~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v 224 (418)
|++|++|++|++|. . . + ++.||+||+|+|++.+.++ .+..++|.+...+
T Consensus 204 -----g~~i~l~~~V~~i~--~--~-v--------~~~~D~VV~a~p~~~~~~~-------------~l~~l~y~s~~~v 252 (367)
T 1i8t_A 204 -----GVDVKLGIDFLKDK--D--S-L--------ASKAHRIIYTGPIDQYFDY-------------RFGALEYRSLKFE 252 (367)
T ss_dssp -----TSEEECSCCGGGSH--H--H-H--------HTTEEEEEECSCHHHHTTT-------------TTCCCCEEEEEEE
T ss_pred -----CCEEEeCCceeeec--h--h-h--------hccCCEEEEeccHHHHHHH-------------hhCCCCCceEEEE
Confidence 68999999999885 2 2 2 2469999999999886543 1345778888888
Q ss_pred EEEeccCC
Q 014807 225 KLWFDKKV 232 (418)
Q Consensus 225 ~l~~~~~~ 232 (418)
.+.++++.
T Consensus 253 ~~~~d~~~ 260 (367)
T 1i8t_A 253 TERHEFPN 260 (367)
T ss_dssp EEEESSSC
T ss_pred EEEecccc
Confidence 88888763
No 31
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.35 E-value=6.8e-13 Score=128.71 Aligned_cols=128 Identities=9% Similarity=-0.016 Sum_probs=94.2
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhHHHHHH
Q 014807 67 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMD 144 (418)
Q Consensus 67 ~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~~~gG~~~~l~~~l~~ 144 (418)
.+++|+++|+.++ +++++++.++.|++.++++.+++++|+..+..+...+...+.. ...+ ++|+||+ +.|+++|++
T Consensus 130 ~~~~sl~e~~~~~-~g~~~~~~~~~p~~~~~~~~~~~~ls~~~~~r~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 207 (384)
T 2bi7_A 130 ADPQTFEEEALRF-IGKELYEAFFKGYTIKQWGMQPSELPASILKRLPVRFNYDDNYFNHKFQGMPKCGY-TQMIKSILN 207 (384)
T ss_dssp SSCCBHHHHHHHH-HCHHHHHHHTHHHHHHHHSSCGGGSBGGGCCSCCCCSSSCCCSCCCSEEEEETTHH-HHHHHHHHC
T ss_pred CCCcCHHHHHHHh-hcHHHHHHHHHHHHHHHhCCCHHHhCHHHHhccccccccccccccccccEEECcCH-HHHHHHHHh
Confidence 4789999999986 8899999999999999999999999987542110000001100 1122 3899997 569988875
Q ss_pred HHHhcCcEEEcCceee-EEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEE
Q 014807 145 SMRTRGCEFLDGRRVT-DFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVS 223 (418)
Q Consensus 145 ~l~~~G~~I~l~t~V~-~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~ 223 (418)
+.|++|++|++|+ +|.. .||+||+|+|++.+.+++ +..++|.+...
T Consensus 208 ---~~g~~I~l~~~V~~~i~~-----------------~~d~VI~a~p~~~~~~~~-------------lg~l~y~s~~~ 254 (384)
T 2bi7_A 208 ---HENIKVDLQREFIVEERT-----------------HYDHVFYSGPLDAFYGYQ-------------YGRLGYRTLDF 254 (384)
T ss_dssp ---STTEEEEESCCCCGGGGG-----------------GSSEEEECSCHHHHTTTT-------------TCCCCEEEEEE
T ss_pred ---cCCCEEEECCeeehhhhc-----------------cCCEEEEcCCHHHHHHhh-------------cCCCCcceEEE
Confidence 3578999999999 7741 289999999999887652 23467887777
Q ss_pred EEEEec
Q 014807 224 VKLWFD 229 (418)
Q Consensus 224 v~l~~~ 229 (418)
+.+.+|
T Consensus 255 v~~~~d 260 (384)
T 2bi7_A 255 KKFTYQ 260 (384)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 777777
No 32
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.32 E-value=4.1e-14 Score=138.12 Aligned_cols=135 Identities=9% Similarity=-0.100 Sum_probs=94.1
Q ss_pred cCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhHHHHHH
Q 014807 67 YDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWMD 144 (418)
Q Consensus 67 ~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~~~gG~~~~l~~~l~~ 144 (418)
.+++|+.+|+++ .+++++++.++.|++.++++.+++++|+..+..+...+...+.. ...+ ++|+||+ +.|+++|++
T Consensus 136 ~~~~s~~e~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~ls~~~~~~~~~~~~~~~~~~~~~~~~~p~gG~-~~l~~~l~~ 213 (399)
T 1v0j_A 136 ADAQNLEEKAIS-LIGRPLYEAFVKGYTAKQWQTDPKELPAANITRLPVRYTFDNRYFSDTYEGLPTDGY-TAWLQNMAA 213 (399)
T ss_dssp TC----CCHHHH-HHCHHHHHHHTHHHHHHHHTSCGGGSCGGGCSCCCCCSSSCCCSCCCSEEECBTTHH-HHHHHHHTC
T ss_pred CCcccHHHHHHH-HHhHHHHHHHHHHHHHhhcCCChhhcChHhhhcceeEeccccchhhhhhcccccccH-HHHHHHHHh
Confidence 467899999998 48899999999999999999999999987652110000001110 1123 3889997 569888875
Q ss_pred HHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEE-ecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEE
Q 014807 145 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETY-SAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVS 223 (418)
Q Consensus 145 ~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~-~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~ 223 (418)
+.|++|++|++|++|.. . | + ++ .||+||+|+|++.+.++. +..++|.++..
T Consensus 214 ---~~g~~I~l~~~V~~I~~----~-v-----~--~~~~aD~VI~t~p~~~l~~~~-------------l~~l~y~s~~~ 265 (399)
T 1v0j_A 214 ---DHRIEVRLNTDWFDVRG----Q-L-----R--PGSPAAPVVYTGPLDRYFDYA-------------EGRLGWRTLDF 265 (399)
T ss_dssp ---STTEEEECSCCHHHHHH----H-H-----T--TTSTTCCEEECSCHHHHTTTT-------------TCCCCEEEEEE
T ss_pred ---cCCeEEEECCchhhhhh----h-h-----h--hcccCCEEEECCcHHHHHhhh-------------hCCCCcceEEE
Confidence 45789999999999863 2 2 1 45 799999999999876551 23567887777
Q ss_pred EEEEeccC
Q 014807 224 VKLWFDKK 231 (418)
Q Consensus 224 v~l~~~~~ 231 (418)
+.+.++.+
T Consensus 266 ~~~~~~~~ 273 (399)
T 1v0j_A 266 EVEVLPIG 273 (399)
T ss_dssp EEEEESSS
T ss_pred EEEEEccc
Confidence 78878764
No 33
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.90 E-value=2.6e-09 Score=103.31 Aligned_cols=234 Identities=7% Similarity=0.033 Sum_probs=138.8
Q ss_pred hcCCccHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCC-Ccce-eeecCCcchhhHHHHH
Q 014807 66 KYDSITARELFKQFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQK-NFDL-VWCRGTLREKIFEPWM 143 (418)
Q Consensus 66 ~~d~~s~~e~l~~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~-~~~~-~~~~gG~~~~l~~~l~ 143 (418)
..+++|++||+.++ +++++++.|+.|++.++|+.+++++|+.++.++-......+.. ...+ ++|+||+. +|++.|+
T Consensus 153 ~~~~~s~~e~~~~~-~G~~~~e~~~~py~~k~~~~~~~~Lsa~~~~Rvp~~~~~d~~yf~~~~qg~P~gGy~-~l~e~l~ 230 (397)
T 3hdq_A 153 VEQVRTSEDVVVSK-VGRDLYNKFFRGYTRKQWGLDPSELDASVTARVPTRTNRDNRYFADTYQAMPLHGYT-RMFQNML 230 (397)
T ss_dssp CSSCCBHHHHHHHH-HHHHHHHHHTHHHHHHHHSSCGGGSBTTTGGGSCCCSSCCCBSCCCSEEEEETTCHH-HHHHHHT
T ss_pred CCCCcCHHHHHHHh-cCHHHHHHHHHHHhCchhCCCHHHHHHHHHHhcCcccccCccchhhhheeccCCCHH-HHHHHHH
Confidence 36789999999984 8899999999999999999999999987443210000000000 1123 47999974 6888875
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEE
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVS 223 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~ 223 (418)
+ +.|++|++|++|+++ + .++.+|+||+|+|++.+... ....|+|.+...
T Consensus 231 ~---~~g~~V~l~~~v~~~------~---------~~~~~d~vI~T~P~d~~~~~-------------~~g~L~yrsl~~ 279 (397)
T 3hdq_A 231 S---SPNIKVMLNTDYREI------A---------DFIPFQHMIYTGPVDAFFDF-------------CYGKLPYRSLEF 279 (397)
T ss_dssp C---STTEEEEESCCGGGT------T---------TTSCEEEEEECSCHHHHTTT-------------TTCCCCEEEEEE
T ss_pred h---ccCCEEEECCeEEec------c---------ccccCCEEEEcCCHHHHHHH-------------hcCCCCCceEEE
Confidence 3 568999999999843 1 12358999999998776321 234577888888
Q ss_pred EEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhc
Q 014807 224 VKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIK 301 (418)
Q Consensus 224 v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~~~L~~~~p 301 (418)
+.+.++.+...+..+ ++-.+.....-+...+.... .+.++++++.-|.. .++.....+++-.+...+.++.
T Consensus 280 ~~~~~~~~~~~~~~~--vn~~d~~p~tRi~e~k~~~~--~~~~~t~i~~Ey~~~~~~pyYpv~~~~~~~~~~~y~~~--- 352 (397)
T 3hdq_A 280 RHETHDTEQLLPTGT--VNYPNDYAYTRVSEFKHITG--QRHHQTSVVYEYPRAEGDPYYPVPRPENAELYKKYEAL--- 352 (397)
T ss_dssp EEEEESSSCSCSSSE--EECSSSSSCSEEEEHHHHHC--CCCSSEEEEEEEEESSSSCCEECCSHHHHHHHHHHHHH---
T ss_pred EEEEeccccCCCCeE--EEeCCCCcceEEEeecccCC--CCCCCEEEEEEECCCCCccccccCchhHHHHHHHHHHH---
Confidence 888888553322222 21111111111222233321 11356666554432 1112112222111111110000
Q ss_pred CCCCceeeeeeEEEcCCCccccCCCCCCCCCCCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 302 DFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 302 ~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
....+||+|+|=. ..+.+-.|+.++.+|..+++++++.
T Consensus 353 ---------------------------------a~~~~~v~~~GRl--g~y~Y~~md~~i~~al~~~~~~~~~ 390 (397)
T 3hdq_A 353 ---------------------------------ADAAQDVTFVGRL--ATYRYYNMDQVVAQALATFRRLQGQ 390 (397)
T ss_dssp ---------------------------------HHHCTTEEECSTT--TTTCCCCHHHHHHHHHHHHHHHHC-
T ss_pred ---------------------------------HhcCCCEEEcccc--eEEEeccHHHHHHHHHHHHHHHhcc
Confidence 0123688898877 4455557999999999999988753
No 34
>2e1m_C L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.80 E-value=1.1e-09 Score=94.12 Aligned_cols=96 Identities=11% Similarity=0.118 Sum_probs=68.3
Q ss_pred CCCCCCCHHHHHHHHHHHHhhhh-cCCCCceeeee--eEEEcCCCc------cccCCCCCC-CCCCCCCCCCCEEEeccc
Q 014807 278 NELMPLKDDQVVAKAVSYLSKCI-KDFSTATVMDH--KIRRFPKSL------THFFPGSYK-YMMRGFTSFPNLFMAGDW 347 (418)
Q Consensus 278 ~~~~~~~~~el~~~~~~~L~~~~-p~~~~~~~~~~--~v~r~~~a~------~~~~pg~~~-~r~~~~~~~~~l~laGd~ 347 (418)
..+..++++++++.++++|.++| |.. ..+... .+++|.... ..+.||... ..+.+..+.++|||||++
T Consensus 49 ~~~~~l~~~e~~~~~l~~L~~~~g~~~--~~~~~~~~~~~~W~~dp~~~Ga~s~~~pg~~~~~~~~l~~p~grl~FAGe~ 126 (181)
T 2e1m_C 49 ARWDSFDDAERYGYALENLQSVHGRRI--EVFYTGAGQTQSWLRDPYACGEAAVYTPHQMTAFHLDVVRPEGPVYFAGEH 126 (181)
T ss_dssp HHHTTSCTTTTHHHHHHHHHHHHCGGG--GGTEEEEEEEEESSSCTTTSSSEECCCTTHHHHHHHHHHSCBTTEEECSGG
T ss_pred HHHHcCCHHHHHHHHHHHHHHHhCCCc--HhhccCcceecccCCCCCCCCcccCcCCCchHHHHHHHhCCCCcEEEEEHH
Confidence 34667889999999999999999 554 234445 667785432 123455431 122334577899999999
Q ss_pred cccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 348 ITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 348 ~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
+.. .. ++|+||+.||.+||++|+..++.
T Consensus 127 ts~-~~-g~~eGAl~SG~raA~~i~~~l~~ 154 (181)
T 2e1m_C 127 VSL-KH-AWIEGAVETAVRAAIAVNEAPVG 154 (181)
T ss_dssp GTT-ST-TSHHHHHHHHHHHHHHHHTCCC-
T ss_pred HcC-Cc-cCHHHHHHHHHHHHHHHHHHhcc
Confidence 642 22 79999999999999999998864
No 35
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.17 E-value=7.2e-05 Score=71.62 Aligned_cols=196 Identities=12% Similarity=0.034 Sum_probs=109.3
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcC
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 215 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~ 215 (418)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|.++++++.||.||+|++.+.. .+++.... .
T Consensus 164 ~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~s~-~l~~~~~~----------~ 229 (382)
T 1ryi_A 164 YFVCKAYVKAAKMLGAEIFEHTPVLHVERDG--EAL-FIKTPSGDVWANHVVVASGVWSG-MFFKQLGL----------N 229 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCCCEEECSS--SSE-EEEETTEEEEEEEEEECCGGGTH-HHHHHTTC----------C
T ss_pred HHHHHHHHHHHHHCCCEEEcCCcEEEEEEEC--CEE-EEEcCCceEEcCEEEECCChhHH-HHHHhcCC----------C
Confidence 3578889999999999999999999999876 455 67776668999999999998743 23322110 0
Q ss_pred CCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHHHH
Q 014807 216 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAVSY 295 (418)
Q Consensus 216 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~el~~~~~~~ 295 (418)
+...+.....+.++.+... ... .++. ...+ ++ +. .++.++.........+....+++..+.+++.
T Consensus 230 ~~~~~~~g~~~~~~~~~~~-~~~-~~~~---~~~~-~~------p~---~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~ 294 (382)
T 1ryi_A 230 NAFLPVKGECLSVWNDDIP-LTK-TLYH---DHCY-IV------PR---KSGRLVVGATMKPGDWSETPDLGGLESVMKK 294 (382)
T ss_dssp CCCEEEEEEEEEEECCSSC-CCS-EEEE---TTEE-EE------EC---TTSEEEEECCCEETCCCCSCCHHHHHHHHHH
T ss_pred CceeccceEEEEECCCCCC-ccc-eEEc---CCEE-EE------Ec---CCCeEEEeecccccCCCCCCCHHHHHHHHHH
Confidence 1122333333444432110 011 1111 1111 11 11 1233322111111122333456677889999
Q ss_pred HhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC--CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 296 LSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 296 L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~--~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
+.+++|.+....+... |....+ ++++.. |.. ....+|+|+|+.+ .+.| +..|..+|+.+|+.|..
T Consensus 295 ~~~~~p~l~~~~~~~~----w~g~~~-~t~d~~---p~ig~~~~~~~l~~~~G~--~g~G---~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 295 AKTMLPAIQNMKVDRF----WAGLRP-GTKDGK---PYIGRHPEDSRILFAAGH--FRNG---ILLAPATGALISDLIMN 361 (382)
T ss_dssp HHHHCGGGGGSEEEEE----EEEEEE-ECSSSC---CEEEEETTEEEEEEEECC--SSCT---TTTHHHHHHHHHHHHTT
T ss_pred HHHhCCCcCCCceeeE----EEEecc-cCCCCC---cEeccCCCcCCEEEEEcC--Ccch---HHHhHHHHHHHHHHHhC
Confidence 9999998764333322 311111 122221 211 1125799999877 4554 45588899999998864
No 36
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.11 E-value=7.3e-05 Score=73.16 Aligned_cols=57 Identities=19% Similarity=0.328 Sum_probs=49.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCc---eeeEEEecCCCCeEEEEEEC-CeEEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRTRGCEFLDGR---RVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t---~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~A~p~~~~ 195 (418)
.+.+.|.+.+++.|++|++++ +|++|..++ +++++|++. |+++.||.||+|+.++.-
T Consensus 162 ~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~--~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 162 NALVAAAREAQRMGVKFVTGTPQGRVVTLIFEN--NDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp HHHHHHHHHHHHTTCEEEESTTTTCEEEEEEET--TEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred HHHHHHHHHHHhcCCEEEeCCcCceEEEEEecC--CeEEEEEECCCCEEECCEEEECCCCChh
Confidence 588899999999999999999 999999876 678778885 568999999999999853
No 37
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.05 E-value=0.00068 Score=64.76 Aligned_cols=204 Identities=11% Similarity=0.092 Sum_probs=109.4
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcC
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLN 215 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~ 215 (418)
..+.+.|.+.+++.|++|+.+++|++|..++ +++++|+++++++.||.||+|+..+... +....... . .
T Consensus 149 ~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~v~gv~~~~g~i~a~~VV~A~G~~s~~-l~~~~g~~-~-------~ 217 (382)
T 1y56_B 149 FEATTAFAVKAKEYGAKLLEYTEVKGFLIEN--NEIKGVKTNKGIIKTGIVVNATNAWANL-INAMAGIK-T-------K 217 (382)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTEEEECSEEEECCGGGHHH-HHHHHTCC-S-------C
T ss_pred HHHHHHHHHHHHHCCCEEECCceEEEEEEEC--CEEEEEEECCcEEECCEEEECcchhHHH-HHHHcCCC-c-------C
Confidence 3578888899999999999999999999876 5676688866689999999999987522 22111000 0 0
Q ss_pred CCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeEEEE-EeecCCCCCCCCHHHHHHHHHH
Q 014807 216 LASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATVIQA-DFYHANELMPLKDDQVVAKAVS 294 (418)
Q Consensus 216 l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~el~~~~~~ 294 (418)
+...+.-...+.++. .........+.... .. ..++ .+. +++-++.. .......+....+++..+.+++
T Consensus 218 ~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~-~~-~~y~-----~p~---~~g~~iG~~~~~~~~~~~~~~~~~~~~~l~~ 286 (382)
T 1y56_B 218 IPIEPYKHQAVITQP-IKRGTINPMVISFK-YG-HAYL-----TQT---FHGGIIGGIGYEIGPTYDLTPTYEFLREVSY 286 (382)
T ss_dssp CCCEEEEEEEEEECC-CSTTSSCSEEEEST-TT-TEEE-----ECC---SSSCCEEECSCCBSSCCCCCCCHHHHHHHHH
T ss_pred cCCCeeEeEEEEEcc-CCcccCCCeEEecC-CC-eEEE-----EEe---CCeEEEecCCCCCCCCCCCCCCHHHHHHHHH
Confidence 111222222333332 21100001111100 00 1111 111 12322221 1111112222345667788889
Q ss_pred HHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC--CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHH
Q 014807 295 YLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 372 (418)
Q Consensus 295 ~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~--~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il 372 (418)
.+.+++|.+....+... |..-.+ .+++.. |.. ....+|+|++.-+ .++ ++.-|..+|+.+|+.|.
T Consensus 287 ~~~~~~p~l~~~~~~~~----~~g~r~-~t~d~~---p~ig~~~~~~~~~~~~G~--~g~---G~~~a~~~g~~la~~i~ 353 (382)
T 1y56_B 287 YFTKIIPALKNLLILRT----WAGYYA-KTPDSN---PAIGRIEELNDYYIAAGF--SGH---GFMMAPAVGEMVAELIT 353 (382)
T ss_dssp HHHHHCGGGGGSEEEEE----EEEEEE-ECTTSC---CEEEEESSSBTEEEEECC--TTC---HHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCCceEE----EEeccc-cCCCCC---cEeccCCCCCCEEEEEec--Ccc---hHhhhHHHHHHHHHHHh
Confidence 99999998764344322 311111 122221 211 1235799998766 344 56668888999999987
Q ss_pred HH
Q 014807 373 DY 374 (418)
Q Consensus 373 ~~ 374 (418)
..
T Consensus 354 ~~ 355 (382)
T 1y56_B 354 KG 355 (382)
T ss_dssp HS
T ss_pred CC
Confidence 64
No 38
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.04 E-value=0.00031 Score=67.66 Aligned_cols=197 Identities=15% Similarity=0.118 Sum_probs=106.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhH--HHhhcccccCChHHHHHhc
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL--QELIKNSILCNREEFLKVL 214 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~--~~Ll~~~~~~~~~~~~~l~ 214 (418)
.+.+.|.+.+++.|++|+++++|++|..++ +++++|.++++++.||.||+|+..+.. .+.+...
T Consensus 175 ~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~--~~~~~v~~~~g~~~a~~vV~a~G~~s~~l~~~~g~~------------ 240 (405)
T 2gag_B 175 HVAWAFARKANEMGVDIIQNCEVTGFIKDG--EKVTGVKTTRGTIHAGKVALAGAGHSSVLAEMAGFE------------ 240 (405)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEETTCCEEEEEEEECCGGGHHHHHHHHTCC------------
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEeC--CEEEEEEeCCceEECCEEEECCchhHHHHHHHcCCC------------
Confidence 578889999999999999999999999876 567778886558999999999998652 2222111
Q ss_pred CCCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeeccccccccCCCCCeE-EEEEeecCCCCCCCCHHHHHHHHH
Q 014807 215 NLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKIYDEHKDDSATV-IQADFYHANELMPLKDDQVVAKAV 293 (418)
Q Consensus 215 ~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~el~~~~~ 293 (418)
+...+.....+..+ +...... ..+... .. ..++ .+. .++.+ +..............+++..+.++
T Consensus 241 -~~~~~~~~~~~~~~-~~~~~~~-~~~~~~--~~-~~y~-----~p~---~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~ 306 (405)
T 2gag_B 241 -LPIQSHPLQALVSE-LFEPVHP-TVVMSN--HI-HVYV-----SQA---HKGELVMGAGIDSYNGYGQRGAFHVIQEQM 306 (405)
T ss_dssp -CCEEEEEEEEEEEE-EBCSCCC-SEEEET--TT-TEEE-----EEC---TTSEEEEEEEECSSCCCSSCCCTHHHHHHH
T ss_pred -CCccccceeEEEec-CCccccC-ceEEeC--CC-cEEE-----EEc---CCCcEEEEeccCCCCccccCCCHHHHHHHH
Confidence 11111111122222 2211000 011110 00 1011 111 23333 332221111122223455678888
Q ss_pred HHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC-CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHH
Q 014807 294 SYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG-FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVV 372 (418)
Q Consensus 294 ~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~-~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il 372 (418)
+.+.+++|.+....+... |..-. .++++.. |.. ..+.+|+|++.-+ .++| +..|...|+.+|+.|.
T Consensus 307 ~~~~~~~p~l~~~~~~~~----w~g~~-~~t~d~~---p~ig~~~~~~l~~~~G~--~g~G---~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 307 AAAVELFPIFARAHVLRT----WGGIV-DTTMDAS---PIISKTPIQNLYVNCGW--GTGG---FKGTPGAGFTLAHTIA 373 (405)
T ss_dssp HHHHHHCGGGGGCEECEE----EEEEE-EEETTSC---CEEEECSSBTEEEEECC--GGGC---STTHHHHHHHHHHHHH
T ss_pred HHHHHhCCccccCCcceE----Eeecc-ccCCCCC---CEecccCCCCEEEEecC--CCch---hhHHHHHHHHHHHHHh
Confidence 899999998754334332 21111 1122221 211 1126799998766 4454 3448888999999987
Q ss_pred HH
Q 014807 373 DY 374 (418)
Q Consensus 373 ~~ 374 (418)
..
T Consensus 374 g~ 375 (405)
T 2gag_B 374 ND 375 (405)
T ss_dssp HT
T ss_pred CC
Confidence 64
No 39
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.02 E-value=0.0002 Score=67.83 Aligned_cols=206 Identities=8% Similarity=-0.024 Sum_probs=106.3
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC-C--eEEecCEEEEccChhhHHHhhccc-ccCChHHHH
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K--ETYSAGAVVLAVGISTLQELIKNS-ILCNREEFL 211 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~-g--~~~~ad~VV~A~p~~~~~~Ll~~~-~~~~~~~~~ 211 (418)
..+.+.|.+.+++.|++|+++++|++|..+++ +.+ .|.++ | .++.||.||+|+.++.. .|+... .++ ..
T Consensus 150 ~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~a~~VV~A~G~~s~-~l~~~~~g~~-~~--- 222 (369)
T 3dme_A 150 HALMLAYQGDAESDGAQLVFHTPLIAGRVRPE-GGF-ELDFGGAEPMTLSCRVLINAAGLHAP-GLARRIEGIP-RD--- 222 (369)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SSE-EEEECTTSCEEEEEEEEEECCGGGHH-HHHHTEETSC-GG---
T ss_pred HHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-ceE-EEEECCCceeEEEeCEEEECCCcchH-HHHHHhcCCC-cc---
Confidence 35888999999999999999999999998764 434 46664 4 48999999999999843 343322 110 00
Q ss_pred HhcCCCCccEEEEEEEeccCCCCCCCCcceeccC--CCccceeeeccccccccCCCCCeE-EEEEeecCCCCCCCCHHHH
Q 014807 212 KVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFG--DSLAWTFFDLNKIYDEHKDDSATV-IQADFYHANELMPLKDDQV 288 (418)
Q Consensus 212 ~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~s~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~el 288 (418)
......+.-..++.++.+.... . .++... ...+. .+. . . .++.+ +..+.-.........+++.
T Consensus 223 --~~~~i~p~rG~~~~~~~~~~~~--~-~~~~~p~~~~~~~-~~~-----~--~-~~g~~~iG~t~e~~~~~~~~~~~~~ 288 (369)
T 3dme_A 223 --SIPPEYLCKGSYFTLAGRAPFS--R-LIYPVPQHAGLGV-HLT-----L--D-LGGQAKFGPDTEWIATEDYTLDPRR 288 (369)
T ss_dssp --GSCCCEEEEEEEEECSSSCSCS--S-EEEECTTCSSCCC-CEE-----E--C-TTSCEEECCCCEEESSCCCCCCGGG
T ss_pred --ccceeeecceEEEEECCCCccC--c-eeecCCCCCCceE-EEe-----C--c-cCCcEEECCCcccccccccccCHHH
Confidence 0011223333344454432111 1 111110 00011 010 0 0 12222 2111100011222334455
Q ss_pred HHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccC-CCCCCCCCCC----CCCCCCEEEeccccccCCCccchHHHHHH
Q 014807 289 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFF-PGSYKYMMRG----FTSFPNLFMAGDWITTRHGSWSQERSYVT 363 (418)
Q Consensus 289 ~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~-pg~~~~r~~~----~~~~~~l~laGd~~~~~~g~~~~egAi~S 363 (418)
++.+++.+.+++|.+....+... |-.-.|... ++.....|.. ....+|+|++..+ .++ ++.-|...
T Consensus 289 ~~~l~~~~~~~~P~l~~~~v~~~----w~G~Rp~~~~~~~~d~~p~i~g~~~~~~~~l~~~~G~--~~~---G~t~ap~~ 359 (369)
T 3dme_A 289 ADVFYAAVRSYWPALPDGALAPG----YTGIRPKISGPHEPAADFAIAGPASHGVAGLVNLYGI--ESP---GLTASLAI 359 (369)
T ss_dssp GGGHHHHHHTTCTTCCTTCCEEE----EEEEEEESSCTTSCCCCCEEECHHHHCCTTEEEEECC--CTT---HHHHHHHH
T ss_pred HHHHHHHHHHHCCCCChhhceec----ceeccccccCCCCCcCCeEEecccccCCCCEEEEeCC--CCc---hHhccHHH
Confidence 77888899999999875444432 222112211 1211122322 1246899998777 334 44557777
Q ss_pred HHHHHHHH
Q 014807 364 GLEAANRV 371 (418)
Q Consensus 364 G~~aA~~I 371 (418)
|+.+|+.|
T Consensus 360 a~~~a~~i 367 (369)
T 3dme_A 360 AEETLARL 367 (369)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77777765
No 40
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=97.99 E-value=0.00069 Score=64.52 Aligned_cols=56 Identities=16% Similarity=0.281 Sum_probs=48.6
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+++++|++|..++ ++ +.|+++++++.||+||+|+.++.
T Consensus 154 ~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~-~~V~t~~g~i~a~~VV~A~G~~s 209 (381)
T 3nyc_A 154 DALHQGYLRGIRRNQGQVLCNHEALEIRRVD--GA-WEVRCDAGSYRAAVLVNAAGAWC 209 (381)
T ss_dssp HHHHHHHHHHHHHTTCEEESSCCCCEEEEET--TE-EEEECSSEEEEESEEEECCGGGH
T ss_pred HHHHHHHHHHHHHCCCEEEcCCEEEEEEEeC--Ce-EEEEeCCCEEEcCEEEECCChhH
Confidence 3588899999999999999999999999877 54 46888767999999999999875
No 41
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.87 E-value=0.00046 Score=67.68 Aligned_cols=207 Identities=14% Similarity=0.094 Sum_probs=108.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEe---------------cCCCCeEEEEEECCeEE--ecCEEEEccChhhHHHhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIY---------------DEERCCISDVVCGKETY--SAGAVVLAVGISTLQELI 199 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~---------------~~~~g~v~~v~~~g~~~--~ad~VV~A~p~~~~~~Ll 199 (418)
.+.+.|.+.+++.|++|+.+++|++|.. ++ +++++|.++++++ .||.||+|+.++.. +|+
T Consensus 182 ~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~--~~v~~V~t~~g~i~~~Ad~VV~AtG~~s~-~l~ 258 (448)
T 3axb_A 182 KVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQE--ARASAAVLSDGTRVEVGEKLVVAAGVWSN-RLL 258 (448)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSC--EEEEEEEETTSCEEEEEEEEEECCGGGHH-HHH
T ss_pred HHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCC--CceEEEEeCCCEEeecCCEEEECCCcCHH-HHH
Confidence 5888999999999999999999999987 44 5677788865578 99999999999753 354
Q ss_pred cccccCChHHHHHhcCCCCccEEEEEEEeccCCC-CCCCCcceeccCCCccc-eeeeccc--cccccCCCC-CeEEE-EE
Q 014807 200 KNSILCNREEFLKVLNLASIDVVSVKLWFDKKVT-VPNVSNACSGFGDSLAW-TFFDLNK--IYDEHKDDS-ATVIQ-AD 273 (418)
Q Consensus 200 ~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~-~~~~~~~~~~~~~~~~~-~~~d~s~--~~~~~~~~~-~~~l~-~~ 273 (418)
+.... .+...+.-..++.++.... ...... ..++.....+ .+++... +.+. .+ +.++. .+
T Consensus 259 ~~~g~----------~~~~~p~rg~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~y~~p~---~~~g~~~iG~~ 324 (448)
T 3axb_A 259 NPLGI----------DTFSRPKKRMVFRVSASTEGLRRIMR-EGDLAGAGAPPLIILPKRVLVRPA---PREGSFWVQLS 324 (448)
T ss_dssp GGGTC----------CCSEEEEEEEEEEEECCSHHHHHHHH-HCCTTSSSSCCEEEETTTEEEEEE---TTTTEEEEEEC
T ss_pred HHcCC----------CCcccccceEEEEeCCcccccccccc-cccccccCCCceEEcCCceEEeec---CCCCeEEEecC
Confidence 43211 0112223233344442211 000000 0000000000 0111100 1111 22 44432 22
Q ss_pred eec--CCCCCC--CCHHHH-HHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC-CCCCCCEEEeccc
Q 014807 274 FYH--ANELMP--LKDDQV-VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG-FTSFPNLFMAGDW 347 (418)
Q Consensus 274 ~~~--~~~~~~--~~~~el-~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~-~~~~~~l~laGd~ 347 (418)
... ...+.. ..+++. .+.+++.+.+++|.+....+... |..-.+..++... |.. ..+ +|||++.-+
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~P~l~~~~~~~~----w~G~r~~~t~d~~---p~ig~~~-~~l~~a~G~ 396 (448)
T 3axb_A 325 DNLGRPFALEEDPQPEEHYYSLAILPILSLYLPQFQDAYPSGG----WAGHYDISFDANP---VVFEPWE-SGIVVAAGT 396 (448)
T ss_dssp CCTTSCBCCCSSCCCCHHHHHHHTHHHHHHHCGGGTTCCCSEE----EEEEEEEETTSSC---EEECGGG-CSEEEEECC
T ss_pred CcccCCcccccccCCChHHHHHHHHHHHHHhCcCcccCCcccc----eEEEeccccCCCC---cEeeecC-CCEEEEECC
Confidence 211 112222 334555 78899999999998764344332 2111111122221 211 123 799998777
Q ss_pred cccCCCccchHHHHHHHHHHHHHHHH
Q 014807 348 ITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 348 ~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++|+ .-|...|+.+|+.|..
T Consensus 397 --~g~G~---~~ap~~g~~la~~i~~ 417 (448)
T 3axb_A 397 --SGSGI---MKSDSIGRVAAAVALG 417 (448)
T ss_dssp --TTCCG---GGHHHHHHHHHHHHTT
T ss_pred --CchhH---hHhHHHHHHHHHHHcC
Confidence 45553 4467778888888754
No 42
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=97.76 E-value=0.0034 Score=60.05 Aligned_cols=61 Identities=11% Similarity=0.047 Sum_probs=48.8
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCeEEecCEEEEccChhh-HHHhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIST-LQELI 199 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~~~~ad~VV~A~p~~~-~~~Ll 199 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +++++|++ ++.+++||.||.|...+. +.+.+
T Consensus 103 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~~~~~~a~~vV~A~G~~s~~~~~~ 168 (397)
T 3cgv_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEECCEEEEEEEeC--CEEEEEEEEECCeEEEEEcCEEEECCCcchHhHHhc
Confidence 467888888888899999999999999886 66766766 245899999999999865 34444
No 43
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=97.72 E-value=0.0031 Score=60.25 Aligned_cols=201 Identities=10% Similarity=0.087 Sum_probs=107.5
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCC
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 216 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l 216 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +.+ .|.++++++.||.||+|+..+.- .+++.... .+
T Consensus 151 ~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~a~~vV~A~G~~~~-~l~~~~g~----------~~ 216 (389)
T 2gf3_A 151 NCIRAYRELAEARGAKVLTHTRVEDFDISP--DSV-KIETANGSYTADKLIVSMGAWNS-KLLSKLNL----------DI 216 (389)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SCE-EEEETTEEEEEEEEEECCGGGHH-HHGGGGTE----------EC
T ss_pred HHHHHHHHHHHHCCCEEEcCcEEEEEEecC--CeE-EEEeCCCEEEeCEEEEecCccHH-HHhhhhcc----------CC
Confidence 578889999999999999999999999876 334 47777778999999999998753 34443210 01
Q ss_pred CCccEEEEEEEeccCCC-CC--CCCcceeccCCCccceeeeccccccccCCCCC-eEE-EEEee----cCCCCCCCC--H
Q 014807 217 ASIDVVSVKLWFDKKVT-VP--NVSNACSGFGDSLAWTFFDLNKIYDEHKDDSA-TVI-QADFY----HANELMPLK--D 285 (418)
Q Consensus 217 ~~~~~~~v~l~~~~~~~-~~--~~~~~~~~~~~~~~~~~~d~s~~~~~~~~~~~-~~l-~~~~~----~~~~~~~~~--~ 285 (418)
...+.-..++.++.... .. .....+.... .... ++ +.+. .++ .++ ..+.. ......... +
T Consensus 217 pl~~~rg~~~~~~~~~~~~~~~~~~p~~~~~~-~~~~-~y----~~p~---~~g~~~~iG~~~~~~~~~~~~~~~~~~~~ 287 (389)
T 2gf3_A 217 PLQPYRQVVGFFESDESKYSNDIDFPGFMVEV-PNGI-YY----GFPS---FGGCGLKLGYHTFGQKIDPDTINREFGVY 287 (389)
T ss_dssp CCEEEEEEEEEECCCHHHHBGGGTCCEEEEEE-TTEE-EE----EECB---STTCCEEEEESSCCEECCTTTCCCCTTSS
T ss_pred ceEEEEEEEEEEecCcccccccccCCEEEEeC-CCCc-EE----EcCC---CCCCcEEEEEcCCCCccCcccccCccCCC
Confidence 12233333444442210 00 0000010000 0000 01 0111 122 332 22211 111111112 3
Q ss_pred HHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC--CCCCCCEEEeccccccCCCccchHHHHHH
Q 014807 286 DQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVT 363 (418)
Q Consensus 286 ~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~--~~~~~~l~laGd~~~~~~g~~~~egAi~S 363 (418)
++..+.+++.+.+++|.+.. .+... |-. +...+|... |.. ....+|+|+|.-+ .++| +.-|...
T Consensus 288 ~~~~~~l~~~~~~~~P~l~~-~~~~~----w~g-~r~~t~D~~---p~ig~~~~~~~l~~a~G~--~g~G---~~~ap~~ 353 (389)
T 2gf3_A 288 PEDESNLRAFLEEYMPGANG-ELKRG----AVC-MYTKTLDEH---FIIDLHPEHSNVVIAAGF--SGHG---FKFSSGV 353 (389)
T ss_dssp HHHHHHHHHHHHHHCGGGCS-CEEEE----EEE-EEEECTTSC---CEEEEETTEEEEEEEECC--TTCC---GGGHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCC-CceEE----EEE-EeccCCCCC---eEEccCCCCCCEEEEECC--cccc---ccccHHH
Confidence 45568899999999998764 33322 311 111223221 211 1235799998877 4554 3447788
Q ss_pred HHHHHHHHHHH
Q 014807 364 GLEAANRVVDY 374 (418)
Q Consensus 364 G~~aA~~Il~~ 374 (418)
|+.+|+.|...
T Consensus 354 g~~la~~i~~~ 364 (389)
T 2gf3_A 354 GEVLSQLALTG 364 (389)
T ss_dssp HHHHHHHHHHS
T ss_pred HHHHHHHHcCC
Confidence 99999998764
No 44
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=97.66 E-value=0.0084 Score=57.02 Aligned_cols=61 Identities=13% Similarity=0.073 Sum_probs=46.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccChhhH-HHhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTL-QELI 199 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~~~~-~~Ll 199 (418)
.+-+.|.+.+.+.|++++++++|+.+..++ ++++++.. +++ +++||.||-|-..... .+.+
T Consensus 103 ~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~--~~~~~v~~~~~~~~~~~~a~~vIgAdG~~S~vr~~~ 168 (397)
T 3oz2_A 103 KFDKHLAALAAKAGADVWVKSPALGVIKEN--GKVAGAKIRHNNEIVDVRAKMVIAADGFESEFGRWA 168 (397)
T ss_dssp HHHHHHHHHHHHHTCEEESSCCEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHH
T ss_pred HHHHHHHHHHHhcCcEEeeeeeeeeeeecc--ceeeeeeecccccceEEEEeEEEeCCccccHHHHHc
Confidence 355677777888899999999999999887 66666554 443 6899999999988653 4444
No 45
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.66 E-value=0.0013 Score=68.20 Aligned_cols=56 Identities=16% Similarity=0.256 Sum_probs=47.9
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|.+ +|+++.||.||+|+..+.
T Consensus 417 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 417 AELTRNVLELAQQQGLQIYYQYQLQNFSRKD--DCW-LLNFAGDQQATHSVVVLANGHQI 473 (676)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCGGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeeeEEEEeC--CeE-EEEECCCCEEECCEEEECCCcch
Confidence 3588889999999999999999999999887 554 6777 567899999999999874
No 46
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.62 E-value=0.00091 Score=69.43 Aligned_cols=56 Identities=11% Similarity=0.081 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCe-EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~-~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+++++|++|..++ +++ .|.+ +|+ ++.||.||+|+..+.
T Consensus 412 ~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~--~~v-~V~t~~G~~~i~Ad~VVlAtG~~s 469 (689)
T 3pvc_A 412 SDLTHALMMLAQQNGMTCHYQHELQRLKRID--SQW-QLTFGQSQAAKHHATVILATGHRL 469 (689)
T ss_dssp HHHHHHHHHHHHHTTCEEEESCCEEEEEECS--SSE-EEEEC-CCCCEEESEEEECCGGGT
T ss_pred HHHHHHHHHHHHhCCCEEEeCCeEeEEEEeC--CeE-EEEeCCCcEEEECCEEEECCCcch
Confidence 3588889999999999999999999999887 444 5776 455 899999999999873
No 47
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.60 E-value=0.0062 Score=59.72 Aligned_cols=57 Identities=23% Similarity=0.237 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~~ 195 (418)
.+.+.|.+.+.+.|++|+++++|++|..++ ++|++|++ +|+ ++.||.||.|......
T Consensus 101 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~--~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~ 163 (453)
T 3atr_A 101 LYNQRVLKEAQDRGVEIWDLTTAMKPIFED--GYVKGAVLFNRRTNEELTVYSKVVVEATGYSRS 163 (453)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSEEEECCGGGCT
T ss_pred HHHHHHHHHHHHcCCEEEeCcEEEEEEEEC--CEEEEEEEEEcCCCceEEEEcCEEEECcCCchh
Confidence 467788888888899999999999999876 66665554 565 7899999999998763
No 48
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=97.55 E-value=0.0032 Score=63.17 Aligned_cols=62 Identities=21% Similarity=0.258 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCC---eEEEEEECC---eEEecCEEEEccChhh-HHHhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC---CISDVVCGK---ETYSAGAVVLAVGIST-LQELI 199 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g---~v~~v~~~g---~~~~ad~VV~A~p~~~-~~~Ll 199 (418)
.+.+.|.+.+++.|++|+++++|++|..+++ + .|+....++ .+++||.||.|..... +.+.+
T Consensus 121 ~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~~~v~v~~~~~~~~~~i~a~~vV~AdG~~S~vR~~l 189 (535)
T 3ihg_A 121 KLEPILLAQARKHGGAIRFGTRLLSFRQHDD-DAGAGVTARLAGPDGEYDLRAGYLVGADGNRSLVRESL 189 (535)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEECG-GGCSEEEEEEEETTEEEEEEEEEEEECCCTTCHHHHHT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEECCC-CccccEEEEEEcCCCeEEEEeCEEEECCCCcchHHHHc
Confidence 4778888888888999999999999998762 2 554322344 6899999999999975 45554
No 49
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=97.54 E-value=0.008 Score=53.41 Aligned_cols=87 Identities=16% Similarity=0.125 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCCCCCCCEEEeccccccCCCccchHHHH
Q 014807 282 PLKDDQVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFTSFPNLFMAGDWITTRHGSWSQERSY 361 (418)
Q Consensus 282 ~~~~~el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~~~~~~l~laGd~~~~~~g~~~~egAi 361 (418)
.....+..+.....+........ ..+....+++|..+.+...... +...+..+|||+|||++ .| +++++|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~w~~a~~~~~~~~----~~~~~~~~~v~l~GDa~---~g-~gv~~A~ 313 (336)
T 3kkj_A 243 DASREQVIEHLHGAFAELIDCTM-PAPVFSLAHRWLYARPAGAHEW----GALSDADLGIYVCGDWC---LS-GRVEGAW 313 (336)
T ss_dssp TSCHHHHHHHHHHHHHTTCSSCC-CCCSEEEEEEEEEEEESSCCCC----SSEEETTTTEEECCGGG---TT-SSHHHHH
T ss_pred cccchhhhhhhhhhhhhhccCCc-CcchheeccceeecccccccCc----cceeeCCCCEEEEeccc---CC-cCHHHHH
Confidence 34555566666666666665433 2455666778866554332111 11224568999999995 23 4799999
Q ss_pred HHHHHHHHHHHHHhCC
Q 014807 362 VTGLEAANRVVDYLGD 377 (418)
Q Consensus 362 ~SG~~aA~~Il~~~~~ 377 (418)
.||+.||+.|++.|..
T Consensus 314 ~sG~~aA~~I~~~L~~ 329 (336)
T 3kkj_A 314 LSGQEAARRLLEHLQL 329 (336)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhhc
Confidence 9999999999999873
No 50
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=97.29 E-value=0.014 Score=58.20 Aligned_cols=56 Identities=16% Similarity=0.165 Sum_probs=46.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +++++|++ +|+ ++.||.||.|.....
T Consensus 112 ~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~--~~v~gv~~~~~dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 112 RFDDMLLRNSERKGVDVRERHEVIDVLFEG--ERAVGVRYRNTEGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEEEET--TEEEEEEEECSSSCEEEEEEEEEEECCCTTC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEEC--CEEEEEEEEeCCCCEEEEEcCEEEECCCcch
Confidence 477788888888999999999999999876 66766665 353 799999999999865
No 51
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.25 E-value=0.00099 Score=63.62 Aligned_cols=112 Identities=10% Similarity=0.056 Sum_probs=64.6
Q ss_pred hhcCCccHHHHHH-HhCCCHHHHHHHHHHHHHhhhcCChhhhHHHHHHHHHHHHHhhcCCCcceeeecCCcchhhHHHHH
Q 014807 65 RKYDSITARELFK-QFGCSERLYRNVIGPLVQVGLFAPAEQCSAAATLGILYFIILAHQKNFDLVWCRGTLREKIFEPWM 143 (418)
Q Consensus 65 ~~~d~~s~~e~l~-~~~~~~~~~~~~~~p~~~~~~~~~~~~~Sa~~~~~~l~~~~~~~~~~~~~~~~~gG~~~~l~~~l~ 143 (418)
.++|++|+.+||+ +.++++..++.+ ..++ .+. ...++|+...+.. .. .......+..+.||+ +.|+++|+
T Consensus 257 ~~lD~~S~~~~L~~~~g~s~~~~~~~-~~~~--~~~-~~~~~s~l~~l~~---~~-~~~~~~~~~~i~GG~-~~l~~~l~ 327 (376)
T 2e1m_A 257 RDFDGYSMGRFLREYAEFSDEAVEAI-GTIE--NMT-SRLHLAFFHSFLG---RS-DIDPRATYWEIEGGS-RMLPETLA 327 (376)
T ss_dssp HHHTTCBHHHHHHHTSCCCHHHHHHH-HHHT--TCT-TTTTSBHHHHHHH---CS-CSCTTCCEEEETTCT-THHHHHHH
T ss_pred HHHhCCCHHHHHhhccCCCHHHHHHH-Hhhc--Ccc-ccchhhHHHHHHH---hh-hhccCCceEEECCcH-HHHHHHHH
Confidence 4579999999999 788999877654 3322 121 2224555443322 11 111122334568996 57999999
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEcc
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAV 190 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~ 190 (418)
+.+ +.+|++|++|++|..+++ | +..+..+......-+|++.+
T Consensus 328 ~~l---~~~i~l~~~V~~I~~~~~-g-v~v~~~~~~~~~g~~~~~~~ 369 (376)
T 2e1m_A 328 KDL---RDQIVMGQRMVRLEYYDP-G-RDGHHGELTGPGGPAVAIQT 369 (376)
T ss_dssp HHG---GGTEECSEEEEEEEECCC-C--------------CCEEEEE
T ss_pred Hhc---CCcEEecCeEEEEEECCC-c-eEEEeCCCcCCCCCeeEEEe
Confidence 877 468999999999998874 5 43232222234556666665
No 52
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.22 E-value=0.054 Score=54.84 Aligned_cols=58 Identities=12% Similarity=0.218 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC----------------CeEEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----------------KETYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~----------------g~~~~ad~VV~A~p~~~~ 195 (418)
.|.+.|.+.+++.|++|+.+++|++|..+++ |+|++|.++ |.++.||.||.|......
T Consensus 145 ~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~-g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~ 218 (584)
T 2gmh_A 145 HLVSWMGEQAEALGVEVYPGYAAAEILFHED-GSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHGH 218 (584)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEEECTT-SSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTCH
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEEcCC-CCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCch
Confidence 4778888888888999999999999998764 667777764 257999999999998753
No 53
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=97.21 E-value=0.014 Score=59.10 Aligned_cols=57 Identities=16% Similarity=0.179 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~~ 195 (418)
.+...+++.+.+.|++|+.+++|++|..++ ++|++|++ +|+ ++.||.||.|+.++.-
T Consensus 189 ~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~--~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~ 251 (571)
T 2rgh_A 189 RLVIDNIKKAAEDGAYLVSKMKAVGFLYEG--DQIVGVKARDLLTDEVIEIKAKLVINTSGPWVD 251 (571)
T ss_dssp HHHHHHHHHHHHTTCEEESSEEEEEEEEET--TEEEEEEEEETTTCCEEEEEBSCEEECCGGGHH
T ss_pred HHHHHHHHHHHHcCCeEEeccEEEEEEEeC--CEEEEEEEEEcCCCCEEEEEcCEEEECCChhHH
Confidence 477788888889999999999999999877 67777774 343 6899999999999853
No 54
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=97.16 E-value=0.016 Score=55.86 Aligned_cols=63 Identities=13% Similarity=0.134 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCe--EEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE--TYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~--~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.+.+.|.+.+++.|++|+.+++|++|..+++ +.++.|.+ +|+ ++.||.||.|+.... +.+.+.
T Consensus 107 ~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~-~~~v~v~~~~g~~~~~~a~~vV~A~G~~s~l~~~~g 173 (421)
T 3nix_A 107 NFDKTLADEAARQGVDVEYEVGVTDIKFFGT-DSVTTIEDINGNKREIEARFIIDASGYGRVIPRMFG 173 (421)
T ss_dssp HHHHHHHHHHHHHTCEEECSEEEEEEEEETT-EEEEEEEETTSCEEEEEEEEEEECCGGGCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCC-EEEEEEEcCCCCEEEEEcCEEEECCCCchhhHHhcC
Confidence 4677888888888999999999999998763 43333444 455 699999999999875 344443
No 55
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=97.13 E-value=0.01 Score=59.99 Aligned_cols=57 Identities=30% Similarity=0.313 Sum_probs=48.5
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~----g--~~~~ad~VV~A~p~~~ 194 (418)
..+...|++.+.+.|++|+++++|++|..++ +++++|++. | .++.||.||.|+.++.
T Consensus 170 ~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~--g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s 232 (561)
T 3da1_A 170 ARLTLEIMKEAVARGAVALNYMKVESFIYDQ--GKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWV 232 (561)
T ss_dssp HHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEEcC--CeEEEEEEEEcCCCceEEEECCEEEECCCcch
Confidence 3588889888999999999999999999977 677777762 3 4789999999999875
No 56
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.12 E-value=0.00045 Score=55.13 Aligned_cols=112 Identities=10% Similarity=0.014 Sum_probs=52.2
Q ss_pred eEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCCCCccEEEEEEEeccCCCCCCCCcceeccCCCccceeeecccc
Q 014807 179 ETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNLASIDVVSVKLWFDKKVTVPNVSNACSGFGDSLAWTFFDLNKI 258 (418)
Q Consensus 179 ~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~d~s~~ 258 (418)
++++||+||+|+|+.++..+...+.++ ....++++++++....++.+.|++++|.... .. ++.+ .
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP-~~k~~Ai~~l~~g~~~Kv~l~f~~~FW~~~~---~~----------gd~s-~ 68 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFS-YKKRRAVIETHYDQATKVLLEFSRRWWEFTE---AD----------WKRE-L 68 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCC-HHHHHHHHHCCEECEEEEEEEESSCGGGCCH---HH----------HHHH-H
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCC-HHHHHHHHhCCCcceeEEEEEECCCCCCCCC---cc----------cccc-C
Confidence 578999999999999998876655553 5556788999999999999999999884321 11 1111 1
Q ss_pred ccccCCCCCeEEEEEeec--CCCCCCCCHHHHHHHHHHHHhhhhcCCCCceee
Q 014807 259 YDEHKDDSATVIQADFYH--ANELMPLKDDQVVAKAVSYLSKCIKDFSTATVM 309 (418)
Q Consensus 259 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~el~~~~~~~L~~~~p~~~~~~~~ 309 (418)
.+. ..+.++....++ +..|..+++ +-.+.++..|..++|+....+++
T Consensus 69 ~~~---~pg~l~~f~~wg~~A~~~~~l~~-~~r~~~~~~l~~~~p~~~~~~~~ 117 (130)
T 2e1m_B 69 DAI---APGLYDYYQQWGEDDAEAALALP-QSVRNLPTGLLGAHPSVDESRIG 117 (130)
T ss_dssp HHH---STTHHHHHHHHCCCSCCCC----------------------------
T ss_pred CCC---CCeEEEEecccCHHHHHHhcCCH-HHHHHHHHHHHHhCCCCcHHHHH
Confidence 010 112211111011 234566655 56788899999999976533444
No 57
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=97.09 E-value=0.0025 Score=61.48 Aligned_cols=58 Identities=19% Similarity=0.169 Sum_probs=44.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh-HHHhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELI 199 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~-~~~Ll 199 (418)
.|.+.|.+.+.+ ++|+++++|++|..++ +.+. |++ +|+++.||.||.|..... +.+.+
T Consensus 128 ~l~~~L~~~~~~--~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~a~~vV~AdG~~S~vr~~l 187 (407)
T 3rp8_A 128 ELQREMLDYWGR--DSVQFGKRVTRCEEDA--DGVT-VWFTDGSSASGDLLIAADGSHSALRPWV 187 (407)
T ss_dssp HHHHHHHHHHCG--GGEEESCCEEEEEEET--TEEE-EEETTSCEEEESEEEECCCTTCSSHHHH
T ss_pred HHHHHHHHhCCc--CEEEECCEEEEEEecC--CcEE-EEEcCCCEEeeCEEEECCCcChHHHHHh
Confidence 466777777765 8999999999999887 4454 555 677899999999999865 34444
No 58
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=96.90 E-value=0.076 Score=52.64 Aligned_cols=57 Identities=18% Similarity=0.131 Sum_probs=47.4
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhhH
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 195 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~~ 195 (418)
..+...|.+.+.+.|++|+.+++|++|..++ + +++|++ +|+ ++.||.||.|+.++.-
T Consensus 149 ~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~--~-~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~ 211 (501)
T 2qcu_A 149 ARLVLANAQMVVRKGGEVLTRTRATSARREN--G-LWIVEAEDIDTGKKYSWQARGLVNATGPWVK 211 (501)
T ss_dssp HHHHHHHHHHHHHTTCEEECSEEEEEEEEET--T-EEEEEEEETTTCCEEEEEESCEEECCGGGHH
T ss_pred HHHHHHHHHHHHHcCCEEEcCcEEEEEEEeC--C-EEEEEEEECCCCCEEEEECCEEEECCChhHH
Confidence 3578889999999999999999999999865 3 566766 454 7899999999999853
No 59
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.76 E-value=0.074 Score=50.66 Aligned_cols=61 Identities=10% Similarity=0.022 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccChhhH-HHhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTL-QELI 199 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~~~~-~~Ll 199 (418)
.+.+.|.+.+.+.|++|+++++|++|..+++ +.+ .|++ +|+ +++||.||.|...... .+.+
T Consensus 104 ~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~~~~~~a~~vV~AdG~~S~vr~~l 169 (394)
T 1k0i_A 104 EVTRDLMEAREACGATTVYQAAEVRLHDLQG-ERP-YVTFERDGERLRLDCDYIAGCDGFHGISRQSI 169 (394)
T ss_dssp HHHHHHHHHHHHTTCEEESSCEEEEEECTTS-SSC-EEEEEETTEEEEEECSEEEECCCTTCSTGGGS
T ss_pred HHHHHHHHHHHhcCCeEEeceeEEEEEEecC-Cce-EEEEecCCcEEEEEeCEEEECCCCCcHHHHhc
Confidence 4677788888888999999999999987642 334 3444 676 7999999999998653 4444
No 60
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.65 E-value=0.019 Score=58.18 Aligned_cols=56 Identities=21% Similarity=0.165 Sum_probs=45.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CC--eEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g--~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +.+++|++ +| .++.||.||.|.....
T Consensus 129 ~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~--g~~~~V~~~~~G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 129 EFDKLLLDEARSRGITVHEETPVTDVDLSD--PDRVVLTVRRGGESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCEEEEECCS--TTCEEEEEEETTEEEEEEESEEEECCGGGC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcC--CCEEEEEEecCCceEEEEcCEEEECCCCcc
Confidence 477788888888999999999999999864 33456666 55 4799999999999866
No 61
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=96.53 E-value=0.13 Score=50.89 Aligned_cols=61 Identities=18% Similarity=0.172 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCe---EEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~---~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.+-+.|.+.+.+.|++|+.+++|++|..++ +.|+ |++ ++. +++||.||.|..... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 173 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEG--DHVV-VEVEGPDGPRSLTTRYVVGCDGGRSTVRKAAG 173 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECS--SCEE-EEEECSSCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CEEE-EEEEcCCCcEEEEeCEEEEccCcccHHHHHcC
Confidence 477788888888899999999999999877 3464 554 443 789999999999976 455554
No 62
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=96.53 E-value=0.21 Score=51.12 Aligned_cols=63 Identities=25% Similarity=0.300 Sum_probs=46.9
Q ss_pred hhHHHHHHHHHhcCc--EEEcCceeeEEEecCC--CCeEEEEEE-------CC--eEEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEE--RCCISDVVC-------GK--ETYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~--~I~l~t~V~~I~~~~~--~g~v~~v~~-------~g--~~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.+.+.|.+.+++.|+ +|+++++|++|..+++ +..|+ |++ +| ++++||.||.|..... +.+.+.
T Consensus 142 ~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~-v~~~~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 218 (639)
T 2dkh_A 142 RVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVT-VTLERCDAAHAGQIETVQARYVVGCDGARSNVRRAIG 218 (639)
T ss_dssp HHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEE-EEEEECSGGGTTCEEEEEEEEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEE-EEEEeccccCCCCeEEEEeCEEEECCCcchHHHHHhC
Confidence 477788888888887 9999999999998652 01343 433 35 4789999999999876 456654
No 63
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=96.40 E-value=0.15 Score=50.45 Aligned_cols=61 Identities=18% Similarity=0.137 Sum_probs=47.5
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCe---EEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE---TYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~---~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +.|+ |++ ++. +++||.||.|..... +.+.+.
T Consensus 107 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~--~~v~-v~~~~~~g~~~~~a~~vVgADG~~S~VR~~lg 172 (500)
T 2qa1_A 107 VTETHLEQWATGLGADIRRGHEVLSLTDDG--AGVT-VEVRGPEGKHTLRAAYLVGCDGGRSSVRKAAG 172 (500)
T ss_dssp HHHHHHHHHHHHTTCEEEETCEEEEEEEET--TEEE-EEEEETTEEEEEEESEEEECCCTTCHHHHHTT
T ss_pred HHHHHHHHHHHHCCCEEECCcEEEEEEEcC--CeEE-EEEEcCCCCEEEEeCEEEECCCcchHHHHHcC
Confidence 467778888888899999999999999877 4454 554 332 789999999999876 455554
No 64
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.39 E-value=0.008 Score=58.82 Aligned_cols=58 Identities=17% Similarity=0.302 Sum_probs=49.5
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC-CeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~A~p~~~ 194 (418)
+..+.+.|.+.+++.|++|+++++|++|..++ +++++|.++ |+++.||.||+|+....
T Consensus 133 ~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~--~~v~~V~~~~G~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 133 AQSVVDALLTRLKDLGVKIRTNTPVETIEYEN--GQTKAVILQTGEVLETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTCCEEECSCEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCcEEEEEEecC--CcEEEEEECCCCEEECCEEEECCCCCc
Confidence 35688999999999999999999999999876 666778874 55699999999998765
No 65
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=96.26 E-value=0.011 Score=56.92 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=48.9
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|..++ +++.+|++ +|+++.||.||+|++..
T Consensus 183 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~V~~~dG~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 183 TPEISSYFHDRHSGAGIRMHYGVRATEIAAEG--DRVTGVVLSDGNTLPCDLVVVGVGVI 240 (404)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTSCEEECSEEEECCCEE
T ss_pred CHHHHHHHHHHHHhCCcEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECcCCc
Confidence 45678888889999999999999999998876 66777877 57789999999999874
No 66
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=96.24 E-value=0.011 Score=57.23 Aligned_cols=58 Identities=19% Similarity=0.259 Sum_probs=49.1
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|++++.|++|..++ +++.+|++ +|+++.||.||+|++...
T Consensus 193 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~~v~l~dG~~i~aD~Vv~a~G~~p 251 (415)
T 3lxd_A 193 GEALSEFYQAEHRAHGVDLRTGAAMDCIEGDG--TKVTGVRMQDGSVIPADIVIVGIGIVP 251 (415)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEESS--SBEEEEEESSSCEEECSEEEECSCCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEecC--CcEEEEEeCCCCEEEcCEEEECCCCcc
Confidence 45678888888999999999999999999866 66777877 677899999999998643
No 67
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.17 E-value=0.01 Score=59.50 Aligned_cols=56 Identities=29% Similarity=0.310 Sum_probs=48.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC-CeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+++++|++|..++ +++++|+++ |+++.||.||+|+....
T Consensus 221 ~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~--~~v~gV~l~~G~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 221 TMIEKMRATIIELGGEIRFSTRVDDLHMED--GQITGVTLSNGEEIKSRHVVLAVGHSA 277 (549)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEEESS--SBEEEEEETTSCEEECSCEEECCCTTC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCCh
Confidence 477888888888999999999999999876 567778884 67899999999999876
No 68
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=96.16 E-value=0.011 Score=62.60 Aligned_cols=56 Identities=14% Similarity=0.169 Sum_probs=49.9
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +++++|.++++++.||.||+|+.++.
T Consensus 152 ~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~--~~v~~V~t~~G~i~Ad~VV~AaG~~s 207 (830)
T 1pj5_A 152 RAVQLLIKRTESAGVTYRGSTTVTGIEQSG--GRVTGVQTADGVIPADIVVSCAGFWG 207 (830)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEET--TEEEEEEETTEEEECSEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCceEEEEEEeC--CEEEEEEECCcEEECCEEEECCccch
Confidence 588899999999999999999999999876 66777888777899999999999986
No 69
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.07 E-value=0.084 Score=53.27 Aligned_cols=61 Identities=21% Similarity=0.187 Sum_probs=47.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CC-eEEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ETYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g-~~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.+.+.|.+.+++.|++|+.+++|++|..+++ + |+ |++ +| ++++||.||.|..... +.+.+.
T Consensus 149 ~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~-~-v~-v~~~~~~G~~~~~a~~vV~ADG~~S~vR~~lG 214 (570)
T 3fmw_A 149 RTEALLAEHAREAGAEIPRGHEVTRLRQDAE-A-VE-VTVAGPSGPYPVRARYGVGCDGGRSTVRRLAA 214 (570)
T ss_dssp HHHHHHHHHHHHHTEECCBSCEEEECCBCSS-C-EE-EEEEETTEEEEEEESEEEECSCSSCHHHHHTT
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-e-EE-EEEEeCCCcEEEEeCEEEEcCCCCchHHHHcC
Confidence 4677888888888999999999999998773 3 54 554 45 5899999999999865 455553
No 70
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=96.00 E-value=0.012 Score=55.59 Aligned_cols=55 Identities=18% Similarity=0.327 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+.+++|++|..++ +.+ .|.++++++.||.||+|+.++.
T Consensus 150 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~--~~~-~v~~~~g~~~a~~vV~a~G~~s 204 (372)
T 2uzz_A 150 LAIKTWIQLAKEAGCAQLFNCPVTAIRHDD--DGV-TIETADGEYQAKKAIVCAGTWV 204 (372)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSE-EEEESSCEEEEEEEEECCGGGG
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEEEEEcC--CEE-EEEECCCeEEcCEEEEcCCccH
Confidence 578889999989999999999999999876 444 5677655799999999999875
No 71
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=95.84 E-value=0.016 Score=55.51 Aligned_cols=55 Identities=29% Similarity=0.417 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+++++|++|..++ +.+ .|.++++++.||.||+|+..+.
T Consensus 154 ~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~--~~v-~v~t~~g~i~a~~VV~A~G~~s 208 (397)
T 2oln_A 154 GTLAALFTLAQAAGATLRAGETVTELVPDA--DGV-SVTTDRGTYRAGKVVLACGPYT 208 (397)
T ss_dssp HHHHHHHHHHHHTTCEEEESCCEEEEEEET--TEE-EEEESSCEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEcC--CeE-EEEECCCEEEcCEEEEcCCcCh
Confidence 477888888888999999999999999876 445 4667666899999999999874
No 72
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.77 E-value=0.02 Score=56.97 Aligned_cols=57 Identities=21% Similarity=0.286 Sum_probs=48.3
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecC-EEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAG-AVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad-~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+++++|++|..+++ |+|++|.+ +++ ++.|| .||+|+....
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~-g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDT-GRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTT-CCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCC-CcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 5899999999999999999999999998843 78888876 344 58996 9999999765
No 73
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=95.77 E-value=0.018 Score=56.31 Aligned_cols=59 Identities=12% Similarity=0.208 Sum_probs=48.9
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
+...+.+.+.+.+++.|++|+++++|++|..++ +++..+.++|+++.+|.||+|++...
T Consensus 189 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~v~~v~~~g~~i~~D~vv~a~G~~p 247 (452)
T 2cdu_A 189 FDKEFTDILAKDYEAHGVNLVLGSKVAAFEEVD--DEIITKTLDGKEIKSDIAILCIGFRP 247 (452)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESSCEEEEEEET--TEEEEEETTSCEEEESEEEECCCEEE
T ss_pred hhhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCC--CeEEEEEeCCCEEECCEEEECcCCCC
Confidence 345577888899999999999999999998655 56666667888999999999998654
No 74
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=95.74 E-value=0.02 Score=55.45 Aligned_cols=62 Identities=18% Similarity=0.275 Sum_probs=50.6
Q ss_pred eecCCcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 129 WCRGTLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 129 ~~~gG~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
++... ...+.+.|.+.+++.|++|+++++|++|..++ +.+ .|.++++++.||.||+|+....
T Consensus 126 ~~~~~-~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~--~~~-~V~~~~g~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 126 FCDHS-AKDIIRMLMAEMKEAGVQLRLETSIGEVERTA--SGF-RVTTSAGTVDAASLVVASGGKS 187 (417)
T ss_dssp EESSC-HHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTEEEEESEEEECCCCSS
T ss_pred eeCCC-HHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCcEEEeeEEEECCCCcc
Confidence 34333 34689999999999999999999999999876 444 5777666999999999999865
No 75
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=95.72 E-value=0.025 Score=57.18 Aligned_cols=58 Identities=19% Similarity=0.230 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|++ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 255 AHVVQVLYDNAVKRNIDLRMNTRGIEVLKDDK-GTVKGILVKGMYKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEECTT-SCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEeeEeEEcCC-CeEEEEEEEeCCCcEEEEECCeEEEeCCCcc
Confidence 46889999999999999999999999998654 66777665 465 689999999998854
No 76
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=95.46 E-value=0.025 Score=57.12 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=48.2
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+++++|++|..+++ ++|++|++ +|+ ++.||.||+|+....
T Consensus 250 ~~l~~~L~~~~~~~gv~i~~~~~v~~l~~~~~-g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 250 PEIIDTLRKAAKEQGIDTRLNSRVVKLVVNDD-HSVVGAVVHGKHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp HHHHHHHHHHHHHTTCCEECSEEEEEEEECTT-SBEEEEEEEETTTEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEECCC-CcEEEEEEEeCCCcEEEEEcCEEEEecCCcc
Confidence 45889999999999999999999999998763 56777665 465 689999999999865
No 77
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.40 E-value=0.035 Score=56.07 Aligned_cols=58 Identities=22% Similarity=0.241 Sum_probs=46.7
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+++++|++|..+++ |+|++|.+ +|+ ++.||.||+|+....
T Consensus 255 ~~l~~~L~~~~~~~gv~i~~~t~v~~l~~~~~-g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 255 AHVAQVLWDNAVKRGTDIRLNSRVVRILEDAS-GKVTGVLVKGEYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp HHHHHHHHHHHHHTTCEEESSEEEEEEEEC---CCEEEEEEEETTTEEEEEECSEEEECCCCCT
T ss_pred HHHHHHHHHHHHHcCCeEEecCEEEEEEECCC-CeEEEEEEEeCCCcEEEEEcCEEEEeCCCCc
Confidence 45889999999999999999999999987653 56777765 454 689999999999654
No 78
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.38 E-value=0.043 Score=53.91 Aligned_cols=58 Identities=19% Similarity=0.273 Sum_probs=47.2
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|+++++|++|..++ +++..+..+|+++.+|.||+|++..
T Consensus 200 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v~v~~~~g~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 200 TSKSLSQMLRHDLEKNDVVVHTGEKVVRLEGEN--GKVARVITDKRTLDADLVILAAGVS 257 (472)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESS--SBEEEEEESSCEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhcCCEEEeCCEEEEEEccC--CeEEEEEeCCCEEEcCEEEECCCCC
Confidence 345678888899999999999999999998755 5565333477899999999999874
No 79
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=95.18 E-value=0.042 Score=52.86 Aligned_cols=57 Identities=14% Similarity=0.139 Sum_probs=47.9
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEec----CCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD----EERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~----~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.|.+.+++.|++|+++++|++|..+ + +.+ .|.+++++++||.||+|+....
T Consensus 108 ~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~--~~~-~v~~~~g~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 108 AEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEK--VRF-VLQVNSTQWQCKNLIVATGGLS 168 (401)
T ss_dssp THHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSS--CCE-EEEETTEEEEESEEEECCCCSS
T ss_pred HHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCC--CeE-EEEECCCEEECCEEEECCCCcc
Confidence 3568899999999999999999999999876 4 444 5777766899999999998765
No 80
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=95.12 E-value=0.039 Score=53.90 Aligned_cols=57 Identities=11% Similarity=0.106 Sum_probs=47.4
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.++++++.||.||+|++..
T Consensus 187 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~v-~v~~~~g~i~aD~Vv~A~G~~ 243 (452)
T 3oc4_A 187 FDKEMVAEVQKSLEKQAVIFHFEETVLGIEETA--NGI-VLETSEQEISCDSGIFALNLH 243 (452)
T ss_dssp CCHHHHHHHHHHHHTTTEEEEETCCEEEEEECS--SCE-EEEESSCEEEESEEEECSCCB
T ss_pred CCHHHHHHHHHHHHHcCCEEEeCCEEEEEEccC--CeE-EEEECCCEEEeCEEEECcCCC
Confidence 345578888899999999999999999998765 556 577766689999999999864
No 81
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=95.07 E-value=0.21 Score=46.65 Aligned_cols=187 Identities=12% Similarity=0.035 Sum_probs=99.0
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhHHHhhcccccCChHHHHHhcCC
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTLQELIKNSILCNREEFLKVLNL 216 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~~~Ll~~~~~~~~~~~~~l~~l 216 (418)
.+.+.|.+.+++.|++|+. ++|++|...+ + +.||.||+|+.++... +++..
T Consensus 143 ~~~~~l~~~~~~~Gv~i~~-~~V~~i~~~~--~-----------~~a~~VV~A~G~~s~~-l~~~~-------------- 193 (351)
T 3g3e_A 143 NYLQWLTERLTERGVKFFQ-RKVESFEEVA--R-----------EGADVIVNCTGVWAGA-LQRDP-------------- 193 (351)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCCCCHHHHH--H-----------TTCSEEEECCGGGGGG-TSCCT--------------
T ss_pred HHHHHHHHHHHHCCCEEEE-EEeCCHHHhh--c-----------CCCCEEEECCCcChHh-hcCCC--------------
Confidence 5888999999999999998 9999886432 2 4699999999987632 33321
Q ss_pred CCccEEEEEEEeccCCCCCCCCcceeccC---CCccceeeeccccccccCCCCCeEEEEEeecCCCCCCCCHHHHHHHHH
Q 014807 217 ASIDVVSVKLWFDKKVTVPNVSNACSGFG---DSLAWTFFDLNKIYDEHKDDSATVIQADFYHANELMPLKDDQVVAKAV 293 (418)
Q Consensus 217 ~~~~~~~v~l~~~~~~~~~~~~~~~~~~~---~~~~~~~~d~s~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~el~~~~~ 293 (418)
...++-..++.++.+ .... . ++... ......++ .+. .++-++..+... ..+....+++..+.++
T Consensus 194 ~l~p~rg~~~~~~~~-~~~~--~-~~~~~~~~~~~~~~y~-----~p~---~~~~~iGg~~~~-~~~~~~~~~~~~~~l~ 260 (351)
T 3g3e_A 194 LLQPGRGQIMKVDAP-WMKH--F-ILTHDPERGIYNSPYI-----IPG---TQTVTLGGIFQL-GNWSELNNIQDHNTIW 260 (351)
T ss_dssp TCEEEEEEEEEEECT-TCCS--E-EEECCTTTCTTCSCEE-----EEC---SSCEEEECCCEE-TCCCCSCCHHHHHHHH
T ss_pred ceeecCCcEEEEeCC-Ccce--E-EEeccccCCCCceeEE-----EeC---CCcEEEeeeeec-CCCCCCCCHHHHHHHH
Confidence 122233333444432 1111 1 11000 00000011 010 122222211111 1222234556678899
Q ss_pred HHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCC-CC--CCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHH
Q 014807 294 SYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKY-MM--RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANR 370 (418)
Q Consensus 294 ~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~-r~--~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~ 370 (418)
+.+.+++|.+....+... |-.-.+ .+|+ ... .+ ......+|+|++.-+ .++ ++.-|...|+.+|+.
T Consensus 261 ~~~~~~~P~l~~~~i~~~----w~G~r~-~t~D-~p~~~~~ig~~~~~~~~~~~~G~--~g~---G~~~ap~~g~~la~l 329 (351)
T 3g3e_A 261 EGCCRLEPTLKNARIIGE----RTGFRP-VRPQ-IRLEREQLRTGPSNTEVIHNYGH--GGY---GLTIHWGCALEAAKL 329 (351)
T ss_dssp HHHHHHCGGGGGCEEEEE----EEEEEE-ECSS-CEEEEEEECCSSSCEEEEEEECC--TTC---HHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCccCCcEeee----eEeeCC-CCCC-ccceeeeccCCCCCCeEEEEeCC--Ccc---hHhhhHHHHHHHHHH
Confidence 999999998764444432 211111 1122 100 00 011225789998766 344 456688889999999
Q ss_pred HHHHhC
Q 014807 371 VVDYLG 376 (418)
Q Consensus 371 Il~~~~ 376 (418)
|.+.+.
T Consensus 330 i~~~~~ 335 (351)
T 3g3e_A 330 FGRILE 335 (351)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 988765
No 82
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.03 E-value=0.056 Score=52.50 Aligned_cols=57 Identities=19% Similarity=0.353 Sum_probs=46.8
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEe--cCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~--~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|.. ++ ++++.|.+ +|+++.+|.||+|++..
T Consensus 190 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~--~~v~~v~~~~G~~i~~D~Vv~a~G~~ 249 (431)
T 1q1r_A 190 APPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQ--QKVTAVLCEDGTRLPADLVIAGIGLI 249 (431)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTT--CCEEEEEETTSCEEECSEEEECCCEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCC--CcEEEEEeCCCCEEEcCEEEECCCCC
Confidence 345777888889999999999999999987 44 55666777 57789999999999864
No 83
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=94.96 E-value=0.052 Score=47.81 Aligned_cols=55 Identities=15% Similarity=0.042 Sum_probs=44.6
Q ss_pred hhhHHHHHHHHHhc-CcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 136 EKIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 136 ~~l~~~l~~~l~~~-G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
..+.+.|.+.+++. |++|+ +++|++|..++ +++++|.+ +|+++.||.||+|+...
T Consensus 68 ~~~~~~l~~~~~~~~gv~i~-~~~v~~i~~~~--~~v~~v~~~~g~~i~a~~VV~A~G~~ 124 (232)
T 2cul_A 68 WAFHARAKYLLEGLRPLHLF-QATATGLLLEG--NRVVGVRTWEGPPARGEKVVLAVGSF 124 (232)
T ss_dssp HHHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCCEECSEEEECCTTC
T ss_pred HHHHHHHHHHHHcCCCcEEE-EeEEEEEEEeC--CEEEEEEECCCCEEECCEEEECCCCC
Confidence 35777888888886 88988 67999999876 66767777 46689999999999884
No 84
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=94.60 E-value=0.051 Score=52.36 Aligned_cols=56 Identities=16% Similarity=0.220 Sum_probs=45.5
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.+.+.+++.|++|++++.|++|..++ ++.+|++ +|+++.||.||+|++...
T Consensus 185 ~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~---~~~~v~~~dg~~i~aD~Vv~a~G~~p 241 (410)
T 3ef6_A 185 RRIGAWLRGLLTELGVQVELGTGVVGFSGEG---QLEQVMASDGRSFVADSALICVGAEP 241 (410)
T ss_dssp HHHHHHHHHHHHHHTCEEECSCCEEEEECSS---SCCEEEETTSCEEECSEEEECSCEEE
T ss_pred HHHHHHHHHHHHHCCCEEEeCCEEEEEeccC---cEEEEEECCCCEEEcCEEEEeeCCee
Confidence 3467778888889999999999999998644 3446777 678999999999998753
No 85
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=94.53 E-value=0.026 Score=54.30 Aligned_cols=55 Identities=16% Similarity=0.159 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceee---------EEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVT---------DFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~---------~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+.+++|+ +|..++ +++ +|.++++++.||.||+|+.++.
T Consensus 173 ~l~~~L~~~~~~~Gv~i~~~~~v~~~~g~~~~~~i~~~~--~~v-~v~~~~g~i~a~~VV~A~G~~s 236 (405)
T 3c4n_A 173 SLALLAAQQAIGQGAGLLLNTRAELVPGGVRLHRLTVTN--THQ-IVVHETRQIRAGVIIVAAGAAG 236 (405)
T ss_dssp HHHHHHHHHHHTTTCEEECSCEEEEETTEEEEECBCC----------CBCCEEEEEEEEEECCGGGH
T ss_pred HHHHHHHHHHHHCCCEEEcCCEEEeccccccccceEeeC--CeE-EEEECCcEEECCEEEECCCccH
Confidence 488889999988999999999999 888766 555 6767666899999999999875
No 86
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=94.52 E-value=0.07 Score=52.83 Aligned_cols=57 Identities=12% Similarity=0.165 Sum_probs=46.2
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|.+ +|+++.+|.||+|++...
T Consensus 222 d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vv~a~G~~p 279 (499)
T 1xdi_A 222 DADAALVLEESFAERGVRLFKNARAASVTRTG--AGV-LVTMTDGRTVEGSHALMTIGSVP 279 (499)
T ss_dssp SHHHHHHHHHHHHHTTCEEETTCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CEE-EEEECCCcEEEcCEEEECCCCCc
Confidence 34577888888999999999999999998765 445 3555 567899999999998754
No 87
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=94.47 E-value=0.076 Score=50.57 Aligned_cols=57 Identities=16% Similarity=0.145 Sum_probs=46.1
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++ +|+++.+|.||+|++...
T Consensus 186 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~i~~d~vv~a~G~~p 243 (384)
T 2v3a_A 186 HPAAAKAVQAGLEGLGVRFHLGPVLASLKKAG--EGL-EAHLSDGEVIPCDLVVSAVGLRP 243 (384)
T ss_dssp CHHHHHHHHHHHHTTTCEEEESCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCEEEEEEecC--CEE-EEEECCCCEEECCEEEECcCCCc
Confidence 34577888889999999999999999998765 434 4555 577899999999998643
No 88
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=94.44 E-value=0.089 Score=48.36 Aligned_cols=55 Identities=15% Similarity=0.266 Sum_probs=43.2
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C----C--eEEecCEEEEccCh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----K--ETYSAGAVVLAVGI 192 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~----g--~~~~ad~VV~A~p~ 192 (418)
..+.+.+.+.+++.|++|+++++|++|..++ +++.+|++ + | +++.+|.||+|++.
T Consensus 184 ~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~ 245 (320)
T 1trb_A 184 KILIKRLMDKVENGNIILHTNRTLEEVTGDQ--MGVTGVRLRDTQNSDNIESLDVAGLFVAIGH 245 (320)
T ss_dssp HHHHHHHHHHHHTSSEEEECSCEEEEEEECS--SSEEEEEEECCTTCCCCEEEECSEEEECSCE
T ss_pred HHHHHHHHHhcccCCeEEEcCceeEEEEcCC--CceEEEEEEeccCCCceEEEEcCEEEEEeCC
Confidence 3466777788888999999999999998765 45666665 2 4 47899999999875
No 89
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.39 E-value=0.11 Score=51.89 Aligned_cols=58 Identities=21% Similarity=0.265 Sum_probs=46.0
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeE--EEEEE-CCe-EEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCI--SDVVC-GKE-TYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v--~~v~~-~g~-~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..+++ +++ ..|++ +|+ ++.||.||+|++..
T Consensus 254 ~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~-~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~ 315 (523)
T 1mo9_A 254 DNETRAYVLDRMKEQGMEIISGSNVTRIEEDAN-GRVQAVVAMTPNGEMRIETDFVFLGLGEQ 315 (523)
T ss_dssp SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTT-SBEEEEEEEETTEEEEEECSCEEECCCCE
T ss_pred cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCC-CceEEEEEEECCCcEEEEcCEEEECcCCc
Confidence 345778888999999999999999999987653 543 24566 455 89999999999854
No 90
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=94.37 E-value=0.073 Score=44.53 Aligned_cols=54 Identities=17% Similarity=0.139 Sum_probs=43.8
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
..+.+.+.+.+++.|++|+++ +|++|..+++ + + .|.++++++.+|.||+|+...
T Consensus 56 ~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~-~-~-~v~~~~g~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 56 EELLRRLEAHARRYGAEVRPG-VVKGVRDMGG-V-F-EVETEEGVEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHHHHHHHHTTCEEEEC-CCCEEEECSS-S-E-EEECSSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCC-E-E-EEEECCCEEEECEEEECCCCC
Confidence 457888888899999999999 9999998763 3 3 466654489999999999875
No 91
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=94.36 E-value=0.079 Score=52.23 Aligned_cols=56 Identities=25% Similarity=0.309 Sum_probs=46.1
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +++ .|++ +|+++.+|.||+|++..
T Consensus 231 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 231 DYDLRQLLNDAMVAKGISIIYEATVSQVQSTE--NCY-NVVLTNGQTICADRVMLATGRV 287 (484)
T ss_dssp CHHHHHHHHHHHHHHTCEEESSCCEEEEEECS--SSE-EEEETTSCEEEESEEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeC--CEE-EEEECCCcEEEcCEEEEeeCCC
Confidence 34577888888999999999999999999876 445 4666 56789999999999864
No 92
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=94.30 E-value=0.084 Score=52.21 Aligned_cols=55 Identities=16% Similarity=0.166 Sum_probs=45.0
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
..+.+.+.+.++++|++|++++.|++|..++ +++ .|++ +|+++.||.||+|++..
T Consensus 226 ~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~--~~~-~v~l~dG~~i~aD~Vv~a~G~~ 281 (493)
T 1m6i_A 226 EYLSNWTMEKVRREGVKVMPNAIVQSVGVSS--GKL-LIKLKDGRKVETDHIVAAVGLE 281 (493)
T ss_dssp HHHHHHHHHHHHTTTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECCCEE
T ss_pred HHHHHHHHHHHHhcCCEEEeCCEEEEEEecC--CeE-EEEECCCCEEECCEEEECCCCC
Confidence 3467778888899999999999999998765 544 4666 67789999999999864
No 93
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=94.27 E-value=0.11 Score=50.77 Aligned_cols=56 Identities=16% Similarity=0.160 Sum_probs=46.8
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.+.+.+++.|++|+++++|++|..++ +. ..|.++++++.+|.||+|++...
T Consensus 216 ~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~--~~-~~v~~~~~~i~aD~Vv~a~G~~p 271 (467)
T 1zk7_A 216 PAIGEAVTAAFRAEGIEVLEHTQASQVAHMD--GE-FVLTTTHGELRADKLLVATGRTP 271 (467)
T ss_dssp HHHHHHHHHHHHHTTCEEETTCCEEEEEEET--TE-EEEEETTEEEEESEEEECSCEEE
T ss_pred HHHHHHHHHHHHhCCCEEEcCCEEEEEEEeC--CE-EEEEECCcEEEcCEEEECCCCCc
Confidence 4578888889999999999999999998765 43 45777888899999999998753
No 94
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=94.11 E-value=0.1 Score=52.32 Aligned_cols=56 Identities=16% Similarity=0.168 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHhc-CcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~-G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++. |++|+.+ +|++|..+++ +.+++|++ +|+++.||.||.|+....
T Consensus 195 ~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~-g~~~~v~~~~G~~i~ad~vI~A~G~~S 252 (550)
T 2e4g_A 195 LVADFLRRFATEKLGVRHVED-RVEHVQRDAN-GNIESVRTATGRVFDADLFVDCSGFRG 252 (550)
T ss_dssp HHHHHHHHHHHHHSCCEEEEC-CEEEEEECTT-SCEEEEEETTSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEECCEEEECCCCch
Confidence 4788888888888 9999999 9999988654 65666777 466899999999999865
No 95
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.09 E-value=0.078 Score=52.62 Aligned_cols=62 Identities=13% Similarity=0.080 Sum_probs=45.8
Q ss_pred HHHHHHHHHhcC-cEEEcCceeeEEEecCCCCeEEEEEE---CC-----eEEecCEEEEccChhhHHHhhc
Q 014807 139 FEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC---GK-----ETYSAGAVVLAVGISTLQELIK 200 (418)
Q Consensus 139 ~~~l~~~l~~~G-~~I~l~t~V~~I~~~~~~g~v~~v~~---~g-----~~~~ad~VV~A~p~~~~~~Ll~ 200 (418)
...+.+.+.+.| ++|++++.|++|..+++++++++|++ +| .++.|+.||+|+.+....+||-
T Consensus 224 ~~~~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s~~lL~ 294 (504)
T 1n4w_A 224 DKTYLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGSTELLV 294 (504)
T ss_dssp TTTHHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCCHHHHH
Confidence 344445555565 89999999999999853147888876 45 2678999999999987766543
No 96
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.08 E-value=0.077 Score=52.44 Aligned_cols=57 Identities=19% Similarity=0.349 Sum_probs=46.5
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|++++.|++|.. + +++..|.++|+++.+|.||+|++..
T Consensus 234 ~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~-~--~~v~~v~~~g~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 234 YDRDLTDLMAKNMEEHGIQLAFGETVKEVAG-N--GKVEKIITDKNEYDVDMVILAVGFR 290 (490)
T ss_dssp SCHHHHHHHHHHHHTTTCEEEETCCEEEEEC-S--SSCCEEEESSCEEECSEEEECCCEE
T ss_pred HHHHHHHHHHHHHHhCCeEEEeCCEEEEEEc-C--CcEEEEEECCcEEECCEEEECCCCC
Confidence 3455778888889999999999999999985 3 4454566788899999999999864
No 97
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=94.06 E-value=0.11 Score=51.14 Aligned_cols=58 Identities=10% Similarity=0.082 Sum_probs=45.3
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC-eEEecCEEEEccCh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGI 192 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g-~~~~ad~VV~A~p~ 192 (418)
+...+.+.+.+.+++.|++|+++++|++|..+++ +++..|.+ +| +++.+|.||+|++.
T Consensus 224 ~d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~~~v~~~~G~~~i~~D~vv~a~G~ 283 (479)
T 2hqm_A 224 FDECIQNTITDHYVKEGINVHKLSKIVKVEKNVE-TDKLKIHMNDSKSIDDVDELIWTIGR 283 (479)
T ss_dssp SCHHHHHHHHHHHHHHTCEEECSCCEEEEEECC--CCCEEEEETTSCEEEEESEEEECSCE
T ss_pred cCHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCC-CcEEEEEECCCcEEEEcCEEEECCCC
Confidence 3345778888889999999999999999987653 42334666 56 68999999999985
No 98
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=94.00 E-value=0.099 Score=51.65 Aligned_cols=57 Identities=14% Similarity=0.187 Sum_probs=45.9
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +|+++.+|.||+|++..
T Consensus 230 d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 287 (490)
T 1fec_A 230 DSELRKQLTEQLRANGINVRTHENPAKVTKNAD-GTR-HVVFESGAEADYDVVMLAIGRV 287 (490)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CEE-EEEECCCcEEEcCEEEEccCCC
Confidence 345778888889999999999999999987653 333 4666 56689999999999864
No 99
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=93.98 E-value=0.11 Score=51.45 Aligned_cols=58 Identities=17% Similarity=0.261 Sum_probs=46.1
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|++++.|++|..+++ +.+ .|++ +|+++.+|.||+|++..
T Consensus 233 ~d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~-~~~-~v~~~~G~~i~~D~vv~a~G~~ 291 (495)
T 2wpf_A 233 FDETIREEVTKQLTANGIEIMTNENPAKVSLNTD-GSK-HVTFESGKTLDVDVVMMAIGRI 291 (495)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-ceE-EEEECCCcEEEcCEEEECCCCc
Confidence 3345778888889999999999999999987653 333 4666 57789999999999864
No 100
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=93.90 E-value=0.1 Score=48.54 Aligned_cols=57 Identities=16% Similarity=0.031 Sum_probs=46.3
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.+.+.+++.|++++++++|++|..++ +.+.+|.++++++.+|+||+|+....
T Consensus 76 ~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~~~v~~~~g~~~~d~vV~AtG~~~ 132 (357)
T 4a9w_A 76 AEVLAYLAQYEQKYALPVLRPIRVQRVSHFG--ERLRVVARDGRQWLARAVISATGTWG 132 (357)
T ss_dssp HHHHHHHHHHHHHTTCCEECSCCEEEEEEET--TEEEEEETTSCEEEEEEEEECCCSGG
T ss_pred HHHHHHHHHHHHHcCCEEEcCCEEEEEEECC--CcEEEEEeCCCEEEeCEEEECCCCCC
Confidence 3477788888888899999999999999877 54422777666999999999999754
No 101
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=93.89 E-value=0.13 Score=50.95 Aligned_cols=56 Identities=20% Similarity=0.135 Sum_probs=46.1
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++|+.+ +|++|..+++ +.+++|++ +|+++.||.||.|...+.
T Consensus 174 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-~~~~~v~~~~g~~~~ad~vV~A~G~~S 230 (511)
T 2weu_A 174 EVARYLSEYAIARGVRHVVD-DVQHVGQDER-GWISGVHTKQHGEISGDLFVDCTGFRG 230 (511)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEC-eEeEEEEcCC-CCEEEEEECCCCEEEcCEEEECCCcch
Confidence 47788888888889999999 9999998654 65666777 466899999999999865
No 102
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=93.87 E-value=0.11 Score=50.86 Aligned_cols=57 Identities=18% Similarity=0.148 Sum_probs=45.9
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEE-E-CCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVV-C-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~-~-~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|. + +|+ +.+|.||+|++...
T Consensus 210 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~g~-i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 210 DQDMRRGLHAAMEEKGIRILCEDIIQSVSADAD-GRR-VATTMKHGE-IVADQVMLALGRMP 268 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTT-SCE-EEEESSSCE-EEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCC-CEE-EEEEcCCCe-EEeCEEEEeeCccc
Confidence 445788888899999999999999999998753 433 566 6 455 99999999998643
No 103
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=93.86 E-value=0.11 Score=52.61 Aligned_cols=58 Identities=14% Similarity=0.194 Sum_probs=47.5
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+.+.|++|++++.|++|..+++ |+|++|.+ +|+ ++.||.||+|+....
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~-g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~ 206 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQD-GAVVGCTALCIETGEVVYFKARATVLATGGAG 206 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCEEEEEEEETTTCCEEEEEEEEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCC-CEEEEEEEEEcCCCeEEEEEcCEEEECCCCCc
Confidence 45888999999889999999999999998633 67777764 354 589999999999854
No 104
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=93.81 E-value=0.14 Score=52.59 Aligned_cols=57 Identities=14% Similarity=0.157 Sum_probs=47.6
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~ 194 (418)
..+...|.+.+.+.|++|+.++.|.+|..++ |+|.+|.+ +|+ ++.||.||+|+....
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~ 220 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQD--GKCYGAVVRDLVTGDIIAYVAKGTLIATGGYG 220 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecC--CEEEEEEEEECCCCcEEEEEcCEEEEccCcch
Confidence 4588999999888999999999999999866 77777754 354 489999999999865
No 105
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=93.80 E-value=3.4 Score=42.32 Aligned_cols=39 Identities=18% Similarity=0.106 Sum_probs=30.9
Q ss_pred CCCEEEeccccccCCCc--cchHHHHHHHHHHHHHHHHHhC
Q 014807 338 FPNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 338 ~~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.++++|+||..|+..|. -+|+-+++.+...|.+|...+.
T Consensus 350 ~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~ 390 (665)
T 1pn0_A 350 DERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT 390 (665)
T ss_dssp TTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc
Confidence 37899999999865554 5788899999988888776553
No 106
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=93.75 E-value=0.17 Score=49.70 Aligned_cols=57 Identities=23% Similarity=0.273 Sum_probs=47.1
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|+++++|++|..+ ++++.+.++++++.+|.||+|++...
T Consensus 226 ~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~D~vi~a~G~~p 282 (480)
T 3cgb_A 226 DGDMAEYIYKEADKHHIEILTNENVKAFKGN---ERVEAVETDKGTYKADLVLVSVGVKP 282 (480)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEES---SBEEEEEETTEEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcC---CcEEEEEECCCEEEcCEEEECcCCCc
Confidence 3457788888899999999999999999864 34666777888899999999998653
No 107
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=93.74 E-value=0.11 Score=53.00 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=48.3
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhhH
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTL 195 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~~ 195 (418)
..+.+.|.+.+.+.|++|+.++.|.+|..++ |+|.+|.. +|+ ++.|+.||+|+.....
T Consensus 155 ~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~ 218 (621)
T 2h88_A 155 HSLLHTLYGRSLRYDTSYFVEYFALDLLMEN--GECRGVIALCIEDGTIHRFRAKNTVIATGGYGR 218 (621)
T ss_dssp HHHHHHHHHHHTTSCCEEEETEEEEEEEEET--TEEEEEEEEETTTCCEEEEEEEEEEECCCCCGG
T ss_pred HHHHHHHHHHHHhCCCEEEEceEEEEEEEEC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCcccc
Confidence 4688899999888999999999999999876 77877765 354 6899999999998653
No 108
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=93.68 E-value=0.14 Score=50.05 Aligned_cols=57 Identities=23% Similarity=0.246 Sum_probs=46.3
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .+.+ +|+++.+|.||+|++...
T Consensus 207 ~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~--~~v-~v~~~~g~~i~~D~vv~A~G~~p 264 (455)
T 2yqu_A 207 DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEA--KGA-RVELEGGEVLEADRVLVAVGRRP 264 (455)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEEEEET--TEE-EEEETTSCEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeC--CEE-EEEECCCeEEEcCEEEECcCCCc
Confidence 34577888888999999999999999999766 444 4555 577899999999998753
No 109
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=93.67 E-value=0.15 Score=46.36 Aligned_cols=55 Identities=16% Similarity=0.207 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE----------CC-----eEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----------GK-----ETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~----------~g-----~~~~ad~VV~A~p~~ 193 (418)
.+...|.+.+.+ .|++|++++.|++|..++ +++.+|.+ +| .++.||.||+|+...
T Consensus 120 ~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~--~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~AtG~~ 190 (284)
T 1rp0_A 120 LFTSTIMSKLLARPNVKLFNAVAAEDLIVKG--NRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVSSCGHD 190 (284)
T ss_dssp HHHHHHHHHHHTSTTEEEEETEEEEEEEEET--TEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEECCCSS
T ss_pred HHHHHHHHHHHhcCCCEEEcCcEEEEEEecC--CeEEEEEEeccccccccCccccCceEEEECCEEEECCCCc
Confidence 366677777765 699999999999999876 66766665 22 578999999999864
No 110
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=93.64 E-value=0.11 Score=51.60 Aligned_cols=60 Identities=15% Similarity=0.129 Sum_probs=44.8
Q ss_pred HHHHHHHHHhcC-cEEEcCceeeEEEecCCCC-eEEEEEE---CC-----eEEecCEEEEccChhhHHHhh
Q 014807 139 FEPWMDSMRTRG-CEFLDGRRVTDFIYDEERC-CISDVVC---GK-----ETYSAGAVVLAVGISTLQELI 199 (418)
Q Consensus 139 ~~~l~~~l~~~G-~~I~l~t~V~~I~~~~~~g-~v~~v~~---~g-----~~~~ad~VV~A~p~~~~~~Ll 199 (418)
...+...+.+.| ++|++++.|++|..+++ + ++++|.+ +| .++.|+.||+|+.+....+||
T Consensus 229 ~~~~l~~a~~~~n~~i~~~~~v~~i~~~~~-g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~sp~lL 298 (507)
T 1coy_A 229 DKTYLAQAAATGKLTITTLHRVTKVAPATG-SGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGTSKLL 298 (507)
T ss_dssp TTTHHHHHHHTTCEEEECSEEEEEEEECSS-SSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHHHHHH
T ss_pred HHHHHHHHHhcCCcEEEeCCEEEEEEECCC-CCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCCHHHH
Confidence 344444444555 89999999999999763 4 6888876 45 267899999999998776654
No 111
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=93.58 E-value=0.14 Score=49.94 Aligned_cols=58 Identities=10% Similarity=0.193 Sum_probs=45.8
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .|++ +|+++.+|.||+|++..
T Consensus 206 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 206 FDPMISETLVEVMNAEGPQLHTNAIPKAVVKNTD-GSL-TLELEDGRSETVDCLIWAIGRE 264 (450)
T ss_dssp SCHHHHHHHHHHHHHHSCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEESEEEECSCEE
T ss_pred hhHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCC-cEE-EEEECCCcEEEcCEEEECCCCC
Confidence 3345778888889999999999999999987653 433 4566 57789999999999753
No 112
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=93.23 E-value=0.19 Score=49.75 Aligned_cols=58 Identities=12% Similarity=0.139 Sum_probs=45.9
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeE-EecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKET-YSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~-~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|++++.|++|..+++ +.+ .|.+ +|++ +.+|.||+|++..
T Consensus 215 ~d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~D~vi~a~G~~ 274 (500)
T 1onf_A 215 FDESVINVLENDMKKNNINIVTFADVVEIKKVSD-KNL-SIHLSDGRIYEHFDHVIYCVGRS 274 (500)
T ss_dssp SCHHHHHHHHHHHHHTTCEEECSCCEEEEEESST-TCE-EEEETTSCEEEEESEEEECCCBC
T ss_pred cchhhHHHHHHHHHhCCCEEEECCEEEEEEEcCC-ceE-EEEECCCcEEEECCEEEECCCCC
Confidence 3345778888899999999999999999987653 433 4555 5666 9999999999864
No 113
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=93.13 E-value=0.13 Score=49.98 Aligned_cols=57 Identities=25% Similarity=0.383 Sum_probs=46.2
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|++++.|++|..+ ++++.|.++++++.+|.||+|++...
T Consensus 190 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~i~~d~vi~a~G~~p 246 (447)
T 1nhp_A 190 DKEFTDVLTEEMEANNITIATGETVERYEGD---GRVQKVVTDKNAYDADLVVVAVGVRP 246 (447)
T ss_dssp CHHHHHHHHHHHHTTTEEEEESCCEEEEECS---SBCCEEEESSCEEECSEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEcCCEEEEEEcc---CcEEEEEECCCEEECCEEEECcCCCC
Confidence 3457788888899999999999999999864 33445667888899999999998643
No 114
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=93.11 E-value=0.11 Score=49.59 Aligned_cols=62 Identities=18% Similarity=0.150 Sum_probs=48.9
Q ss_pred hhHHHHHHHHHhc-CcEEEcCceeeEEEecCCCCeEE-EEEE-CCeEEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCIS-DVVC-GKETYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~-G~~I~l~t~V~~I~~~~~~g~v~-~v~~-~g~~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.|.+.|.+.+++. |++|+++++|++|..++ +.++ .|++ +|++++||.||.|...+. +.+.+.
T Consensus 108 ~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~--~~v~g~v~~~~g~~~~ad~vV~AdG~~s~vr~~lg 173 (399)
T 2x3n_A 108 SLRRLVLEKIDGEATVEMLFETRIEAVQRDE--RHAIDQVRLNDGRVLRPRVVVGADGIASYVRRRLL 173 (399)
T ss_dssp HHHHHHHHHHTTCTTEEEECSCCEEEEEECT--TSCEEEEEETTSCEEEEEEEEECCCTTCHHHHHTS
T ss_pred HHHHHHHHHhhhcCCcEEEcCCEEEEEEEcC--CceEEEEEECCCCEEECCEEEECCCCChHHHHHhC
Confidence 5778888888887 89999999999999876 3452 4666 567899999999999866 455553
No 115
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=92.93 E-value=2.5 Score=39.35 Aligned_cols=44 Identities=25% Similarity=0.302 Sum_probs=36.4
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+. ++|++|.. . . + .||.||+|+.++.
T Consensus 142 ~~~~~~l~~~~~~~G~~i~~-~~v~~l~~----~-~--------~-~a~~VV~A~G~~s 185 (363)
T 1c0p_A 142 PKYCQYLARELQKLGATFER-RTVTSLEQ----A-F--------D-GADLVVNATGLGA 185 (363)
T ss_dssp HHHHHHHHHHHHHTTCEEEE-CCCSBGGG----T-C--------S-SCSEEEECCGGGG
T ss_pred HHHHHHHHHHHHHCCCEEEE-EEcccHhh----c-C--------c-CCCEEEECCCcch
Confidence 45889999999999999998 99998753 2 1 2 7999999999886
No 116
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=92.91 E-value=0.22 Score=49.76 Aligned_cols=56 Identities=16% Similarity=0.150 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++.|++++.+ .|++|..+++ +.++.|++ +|+++.||.||.|.....
T Consensus 166 ~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~A~G~~s 222 (538)
T 2aqj_A 166 LVADFLKRWAVERGVNRVVD-EVVDVRLNNR-GYISNLLTKEGRTLEADLFIDCSGMRG 222 (538)
T ss_dssp HHHHHHHHHHHHTTCEEEEC-CEEEEEECTT-SCEEEEEETTSCEECCSEEEECCGGGC
T ss_pred HHHHHHHHHHHHCCCEEEEe-eEeEEEEcCC-CcEEEEEECCCcEEEeCEEEECCCCch
Confidence 47788888888889999999 8999988654 55556777 466899999999999865
No 117
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=92.90 E-value=0.27 Score=48.22 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=44.4
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC---eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK---ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g---~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +.+. +.+ ++ +++.+|.||+|++..
T Consensus 220 ~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~--~~~~-v~~~~~~g~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 220 DEQVAKEAQKILTKQGLKILLGARVTGTEVKN--KQVT-VKFVDAEGEKSQAFDKLIVAVGRR 279 (476)
T ss_dssp CHHHHHHHHHHHHHTTEEEEETCEEEEEEECS--SCEE-EEEESSSEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcC--CEEE-EEEEeCCCcEEEECCEEEEeeCCc
Confidence 44577888888999999999999999999876 4443 443 33 578999999999864
No 118
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=92.81 E-value=0.2 Score=46.19 Aligned_cols=51 Identities=10% Similarity=0.038 Sum_probs=38.9
Q ss_pred HHHHHHHHhc-CcEEEcCceeeEEEecCCCCeEEEEEEC------CeEEecCEEEEccCh
Q 014807 140 EPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVCG------KETYSAGAVVLAVGI 192 (418)
Q Consensus 140 ~~l~~~l~~~-G~~I~l~t~V~~I~~~~~~g~v~~v~~~------g~~~~ad~VV~A~p~ 192 (418)
+.+.+.+.+. |++|++++.|.+|..++ +++.+|++. ++++.+|.||++++.
T Consensus 212 ~~~~~~l~~~~gv~i~~~~~v~~i~~~~--~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~ 269 (338)
T 3itj_A 212 TIMQKRAEKNEKIEILYNTVALEAKGDG--KLLNALRIKNTKKNEETDLPVSGLFYAIGH 269 (338)
T ss_dssp HHHHHHHHHCTTEEEECSEEEEEEEESS--SSEEEEEEEETTTTEEEEEECSEEEECSCE
T ss_pred HHHHHHHHhcCCeEEeecceeEEEEccc--CcEEEEEEEECCCCceEEEEeCEEEEEeCC
Confidence 4556666665 99999999999999876 456666652 257899999999875
No 119
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=92.73 E-value=0.2 Score=46.93 Aligned_cols=55 Identities=11% Similarity=0.046 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CC--eEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g--~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++|+++++|++|..++ +++.+|.+ +| +++.+|.||++++..
T Consensus 203 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 203 KTAHEVERARANGTIDVYLETEVASIEESN--GVLTRVHLRSSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp HHHHSSHHHHHHTSEEEESSEEEEEEEEET--TEEEEEEEEETTCCEEEEECSEEEECCCBC
T ss_pred HHHHHHHHHhhcCceEEEcCcCHHHhccCC--CceEEEEEEecCCCeEEEeCCEEEECCCCC
Confidence 366677777788899999999999998875 55656665 56 578999999998753
No 120
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=92.70 E-value=0.25 Score=48.36 Aligned_cols=56 Identities=18% Similarity=0.124 Sum_probs=45.0
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCe-EEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKE-TYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~-~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +.+ .|++ +|+ ++.+|.||+|++..
T Consensus 206 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~G~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 206 DPLLSATLAENMHAQGIETHLEFAVAALERDA--QGT-TLVAQDGTRLEGFDSVIWAVGRA 263 (463)
T ss_dssp CHHHHHHHHHHHHHTTCEEESSCCEEEEEEET--TEE-EEEETTCCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeE-EEEEeCCcEEEEcCEEEECCCCC
Confidence 34577888888999999999999999998765 333 4566 577 79999999999754
No 121
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=92.69 E-value=0.25 Score=49.42 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=50.0
Q ss_pred HHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCCCC-CCCCEEEeccccccCCCccchHHHHHHHHHH
Q 014807 289 VAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRGFT-SFPNLFMAGDWITTRHGSWSQERSYVTGLEA 367 (418)
Q Consensus 289 ~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~~~-~~~~l~laGd~~~~~~g~~~~egAi~SG~~a 367 (418)
+.+.+..+.+..|++...+.+-+-+- .+.+-|.-. ..-...++ .++|||.|||. .|+. +++-.|..+|.+|
T Consensus 463 l~e~~~~~~~~~~g~~~~~~~l~g~e-~~~ssp~ri----~~~~~~~~~~~~gly~~Geg--aG~a-~gi~~Aa~~G~~~ 534 (549)
T 3nlc_A 463 IREAIPAFDRKIKGFASEDGLLTGVE-TRTSSPVCI----KRGKDFQSVNLKGFYPAGEG--AGYA-GGILSAGIDGIKV 534 (549)
T ss_dssp HHHHHHHHHTTSTTTTCTTCEEEEEE-CCSSCSEEC----CCTTTTSCTTCBTEEECHHH--HTSC-CSHHHHHHHHHHH
T ss_pred HHHHHHHhhccCcCCCCCCcEEEEEe-eccCCceeE----EECCCceECCcCCEEEcccc--CChh-hHHHHHHHHHHHH
Confidence 44566778888888754332222221 111111100 01122344 68999999999 4555 6899999999999
Q ss_pred HHHHHHHhC
Q 014807 368 ANRVVDYLG 376 (418)
Q Consensus 368 A~~Il~~~~ 376 (418)
|+.|+..+.
T Consensus 535 a~~i~~~~~ 543 (549)
T 3nlc_A 535 AEAVARDIV 543 (549)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhh
Confidence 999998864
No 122
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=92.60 E-value=0.19 Score=49.41 Aligned_cols=56 Identities=20% Similarity=0.265 Sum_probs=46.0
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCeEEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+++.|++|+.+++| +|..++ +++.++.+ +++++.||.||+|+....
T Consensus 119 ~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~--~~v~Gv~v~~~~g~~~a~~VVlAtGg~~ 176 (472)
T 2e5v_A 119 REIFNFLLKLAREEGIPIIEDRLV-EIRVKD--GKVTGFVTEKRGLVEDVDKLVLATGGYS 176 (472)
T ss_dssp HHHHHHHHHHHHHTTCCEECCCEE-EEEEET--TEEEEEEETTTEEECCCSEEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEE-EEEEeC--CEEEEEEEEeCCCeEEeeeEEECCCCCc
Confidence 357888888888889999999999 998876 67777765 345688999999999865
No 123
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=92.55 E-value=0.23 Score=49.76 Aligned_cols=58 Identities=14% Similarity=0.281 Sum_probs=45.0
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEec------------------CCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------------------EERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~------------------~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|..+ ++ +++..+..+|+++.||.||+|++..
T Consensus 191 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~g~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 191 DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIK-GHLSLTLSNGELLETDLLIMAIGVR 266 (565)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTT-CEEEEEETTSCEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCC-CcEEEEEcCCCEEEcCEEEECcCCc
Confidence 3457778888899999999999999999873 22 5554333367789999999999864
No 124
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=92.55 E-value=0.76 Score=43.46 Aligned_cols=49 Identities=10% Similarity=0.002 Sum_probs=37.7
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhH-HHhh
Q 014807 149 RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELI 199 (418)
Q Consensus 149 ~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~-~~Ll 199 (418)
.+.+|+++++|++++..++ +.|+ |++ +|++++||.||-|=..... .+.+
T Consensus 122 ~~~~v~~~~~v~~~~~~~~-~~v~-v~~~dG~~~~adlvVgADG~~S~vR~~l 172 (412)
T 4hb9_A 122 LANTIQWNKTFVRYEHIEN-GGIK-IFFADGSHENVDVLVGADGSNSKVRKQY 172 (412)
T ss_dssp CTTTEECSCCEEEEEECTT-SCEE-EEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred ccceEEEEEEEEeeeEcCC-CeEE-EEECCCCEEEeeEEEECCCCCcchHHHh
Confidence 4568999999999987665 5564 555 6889999999999888654 4444
No 125
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.44 E-value=0.28 Score=44.95 Aligned_cols=51 Identities=18% Similarity=0.352 Sum_probs=38.2
Q ss_pred HHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccCh
Q 014807 140 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 140 ~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~ 192 (418)
+.+.+.+.+.|++|+++++|++|..++ +++.+|.+ +|+ ++.+|.||+|++.
T Consensus 194 ~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 250 (319)
T 3cty_A 194 NAYVQEIKKRNIPYIMNAQVTEIVGDG--KKVTGVKYKDRTTGEEKLIETDGVFIYVGL 250 (319)
T ss_dssp HHHHHHHHHTTCCEECSEEEEEEEESS--SSEEEEEEEETTTCCEEEECCSEEEECCCE
T ss_pred HHHHHHHhcCCcEEEcCCeEEEEecCC--ceEEEEEEEEcCCCceEEEecCEEEEeeCC
Confidence 445666778899999999999998765 54555554 354 6889999998753
No 126
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=92.39 E-value=0.24 Score=46.43 Aligned_cols=55 Identities=18% Similarity=0.173 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.+.+.+++.|++|+++++|++|..++ +.+ .|.++++++.+|+||+|+....
T Consensus 89 ~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~g~~~~d~vVlAtG~~~ 143 (369)
T 3d1c_A 89 TYAEYLQVVANHYELNIFENTVVTNISADD--AYY-TIATTTETYHADYIFVATGDYN 143 (369)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEECS--SSE-EEEESSCCEEEEEEEECCCSTT
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEECC--CeE-EEEeCCCEEEeCEEEECCCCCC
Confidence 366677777788899999999999999876 333 4666655799999999999864
No 127
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=92.33 E-value=0.24 Score=50.18 Aligned_cols=56 Identities=18% Similarity=0.103 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~ 195 (418)
.+.+.|.+.+++ .|++| +++.|++|..++ ++|++|.+ +|.++.||.||+|+.....
T Consensus 124 ~~~~~L~~~Le~~~GVeI-~~~~Vt~L~~e~--g~V~GV~t~dG~~i~AdaVVLATG~~s~ 181 (637)
T 2zxi_A 124 RYREYMKKVCENQENLYI-KQEEVVDIIVKN--NQVVGVRTNLGVEYKTKAVVVTTGTFLN 181 (637)
T ss_dssp HHHHHHHHHHHTCTTEEE-EESCEEEEEESS--SBEEEEEETTSCEEECSEEEECCTTCBT
T ss_pred HHHHHHHHHHHhCCCCEE-EEeEEEEEEecC--CEEEEEEECCCcEEEeCEEEEccCCCcc
Confidence 477888888887 48999 578999998876 66878887 5678999999999997643
No 128
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=92.30 E-value=0.23 Score=50.45 Aligned_cols=57 Identities=19% Similarity=0.212 Sum_probs=47.2
Q ss_pred hhhHHHHHHHHHhcC-cEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhh
Q 014807 136 EKIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G-~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~ 194 (418)
..+.+.|.+.+.+.| ++|+.++.|.+|..++ ++|++|.. +|+ ++.||.||+|+....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~--g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s 197 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDD--GHVRGLVAMNMMEGTLVQIRANAVVMATGGAG 197 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEET--TEEEEEEEEETTTTEEEEEECSCEEECCCCCG
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEEcCCCcEEEEEcCeEEECCCCCc
Confidence 358888999888888 9999999999999876 67777653 465 689999999999865
No 129
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=92.28 E-value=0.36 Score=47.13 Aligned_cols=56 Identities=14% Similarity=0.277 Sum_probs=43.1
Q ss_pred chhhHHHHHHHH-HhcCcEEEcCceeeEEEecCCCCeEEEEEE---CC--eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSM-RTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l-~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g--~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+ ++.|++|+++++|++|..++ +.+ .|.+ +| +++.+|.||+|++..
T Consensus 214 d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 214 DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNG--DSV-SLEVEGKNGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECS--SSE-EEEEECC---EEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcC--CeE-EEEEEcCCCceEEEECCEEEECCCcc
Confidence 345778888889 89999999999999998765 334 3443 45 579999999999864
No 130
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=92.28 E-value=0.34 Score=47.36 Aligned_cols=56 Identities=13% Similarity=0.123 Sum_probs=44.4
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--C--Ce--EEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KE--TYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~--g~--~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|..++ +.+ .|++ + |+ ++.+|.||+|++..
T Consensus 209 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 209 DPETAALLRRALEKEGIRVRTKTKAVGYEKKK--DGL-HVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEE-EEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeC--CEE-EEEEeecCCCceeEEEcCEEEECCCcc
Confidence 34577788888999999999999999998765 444 3444 4 66 79999999999754
No 131
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=91.99 E-value=0.36 Score=47.99 Aligned_cols=56 Identities=13% Similarity=0.191 Sum_probs=45.0
Q ss_pred hhHHHHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++ .|++|+.+ .|++|..+++ +.++.|++ +|+++.||.||.|.....
T Consensus 176 ~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~-g~~~~v~~~~g~~i~ad~vV~AdG~~S 233 (526)
T 2pyx_A 176 KFSQLLTEHCTQKLGVTHIRD-HVSQIINNQH-GDIEKLITKQNGEISGQLFIDCTGAKS 233 (526)
T ss_dssp HHHHHHHHHHHHTSCCEEEEC-CEEEEEECTT-SCEEEEEESSSCEEECSEEEECSGGGC
T ss_pred HHHHHHHHHHHhcCCCEEEEe-EEEEEEecCC-CcEEEEEECCCCEEEcCEEEECCCcch
Confidence 477788888888 89999999 5999988654 55556666 456799999999999864
No 132
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=91.96 E-value=0.42 Score=46.63 Aligned_cols=56 Identities=14% Similarity=0.235 Sum_probs=44.1
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CC--eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g--~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|..++ +.+ .+.+ +| +++.+|.||+|++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 211 DADVSKEIEKQFKKLGVTILTATKVESIADGG--SQV-TVTVTKDGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCEEEEEEECS--SCE-EEEEESSSCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcC--CeE-EEEEEcCCceEEEEcCEEEECCCCC
Confidence 34577788888999999999999999998765 334 3444 45 579999999999764
No 133
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=91.93 E-value=0.29 Score=44.93 Aligned_cols=55 Identities=13% Similarity=0.138 Sum_probs=45.3
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccCh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGI 192 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~ 192 (418)
..+.+.+.+.+++.|.++++++.|++|..+++ +. +.|.++++++.+|+||+|+..
T Consensus 67 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~-~~-~~v~~~~g~~~~d~vVlAtG~ 121 (332)
T 3lzw_A 67 QELINNLKEQMAKFDQTICLEQAVESVEKQAD-GV-FKLVTNEETHYSKTVIITAGN 121 (332)
T ss_dssp HHHHHHHHHHHTTSCCEEECSCCEEEEEECTT-SC-EEEEESSEEEEEEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCcEEccCEEEEEEECCC-Cc-EEEEECCCEEEeCEEEECCCC
Confidence 45778888888888999999999999998763 33 457776666999999999987
No 134
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=91.90 E-value=0.25 Score=50.25 Aligned_cols=55 Identities=20% Similarity=0.143 Sum_probs=45.1
Q ss_pred hhHHHHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++ .|++| +++.|+.|..++ ++|++|.+ +|.++.||.||+|+....
T Consensus 125 ~~~~~L~e~Le~~~GV~I-~~~~V~~L~~e~--g~V~GV~t~dG~~I~Ad~VVLATGt~s 181 (651)
T 3ces_A 125 LYRQAVRTALENQPNLMI-FQQAVEDLIVEN--DRVVGAVTQMGLKFRAKAVVLTVGTFL 181 (651)
T ss_dssp HHHHHHHHHHHTCTTEEE-EECCEEEEEESS--SBEEEEEETTSEEEEEEEEEECCSTTT
T ss_pred HHHHHHHHHHHhCCCCEE-EEEEEEEEEecC--CEEEEEEECCCCEEECCEEEEcCCCCc
Confidence 467788888887 58999 678999998876 66878887 567899999999999864
No 135
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=91.88 E-value=0.35 Score=46.41 Aligned_cols=52 Identities=17% Similarity=0.213 Sum_probs=42.7
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|. + +. |++ +|+++.+|.||+|++..
T Consensus 186 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~--~~---v~~~~g~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 186 PATLADFVARYHAAQGVDLRFERSVTGSV--D--GV---VLLDDGTRIAADMVVVGIGVL 238 (408)
T ss_dssp CHHHHHHHHHHHHHTTCEEEESCCEEEEE--T--TE---EEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCcEEEeCCEEEEEE--C--CE---EEECCCCEEEcCEEEECcCCC
Confidence 34577888888999999999999999998 4 52 444 67789999999999864
No 136
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=91.77 E-value=0.37 Score=46.90 Aligned_cols=58 Identities=16% Similarity=0.197 Sum_probs=44.7
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--C--CeEEecCEEEEccChhh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIST 194 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~--g~~~~ad~VV~A~p~~~ 194 (418)
+...+.+.+.+.+++.|++|++++.|++|..++ +.+ .+.+ + ++++.+|.||+|++...
T Consensus 209 ~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~g~~~~~~~D~vv~a~G~~p 270 (455)
T 1ebd_A 209 FEKQMAAIIKKRLKKKGVEVVTNALAKGAEERE--DGV-TVTYEANGETKTIDADYVLVTVGRRP 270 (455)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEET--TEE-EEEEEETTEEEEEEESEEEECSCEEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeC--CeE-EEEEEeCCceeEEEcCEEEECcCCCc
Confidence 344577888888999999999999999998765 444 3443 2 45789999999998653
No 137
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=91.70 E-value=0.27 Score=48.32 Aligned_cols=57 Identities=19% Similarity=0.216 Sum_probs=44.9
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C----CeEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G----KETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~----g~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|++++.|++|..++ +.+ .|++ + |+++.+|.||+|++...
T Consensus 225 ~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~--~~~-~v~~~~~~~~g~~~~~D~vv~a~G~~p 286 (482)
T 1ojt_A 225 DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKE--DGV-YVTFEGANAPKEPQRYDAVLVAAGRAP 286 (482)
T ss_dssp CHHHHHHHHHHHGGGEEEEECSCEEEEEEEET--TEE-EEEEESSSCCSSCEEESCEEECCCEEE
T ss_pred CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcC--CeE-EEEEeccCCCceEEEcCEEEECcCCCc
Confidence 34577888888999999999999999998765 333 3444 4 56789999999998653
No 138
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=91.69 E-value=0.38 Score=47.06 Aligned_cols=58 Identities=17% Similarity=0.269 Sum_probs=45.0
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE------CCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~------~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|+++++|++|..+++ +.+ .+.+ +++++.+|.||+|++..
T Consensus 218 ~~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 218 IDMEISKNFQRILQKQGFKFKLNTKVTGATKKSD-GKI-DVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp CCHHHHHHHHHHHHHTTCEEECSEEEEEEEECTT-SCE-EEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred cCHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCC-ceE-EEEEEecCCCCceEEEcCEEEECcCCC
Confidence 3455778888889999999999999999987653 324 3442 35689999999999864
No 139
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=91.65 E-value=0.35 Score=47.52 Aligned_cols=57 Identities=19% Similarity=0.158 Sum_probs=43.8
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC-----eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-----ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g-----~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|..+++ +.+ .|++ ++ .++.+|.||+|++..
T Consensus 226 d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~-~~~-~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 226 DQQMAELVAASMEERGIPFLRKTVPLSVEKQDD-GKL-LVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTT-SCE-EEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCC-CcE-EEEEecCCCCceeEEEcCEEEECcccc
Confidence 345778888889999999999999999987653 544 3444 32 278999999999864
No 140
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=91.49 E-value=0.36 Score=43.90 Aligned_cols=48 Identities=13% Similarity=0.193 Sum_probs=36.7
Q ss_pred HHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEccCh
Q 014807 143 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 143 ~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~A~p~ 192 (418)
.+.+++.|++|++++.|.+|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 190 ~~~~~~~gv~~~~~~~v~~i~~~~--~~~~~v~~~~~~g~~~~~~~D~vv~a~G~ 242 (315)
T 3r9u_A 190 EKVKKNEKIELITSASVDEVYGDK--MGVAGVKVKLKDGSIRDLNVPGIFTFVGL 242 (315)
T ss_dssp HHHHHCTTEEEECSCEEEEEEEET--TEEEEEEEECTTSCEEEECCSCEEECSCE
T ss_pred HHHHhcCCeEEEeCcEEEEEEcCC--CcEEEEEEEcCCCCeEEeecCeEEEEEcC
Confidence 334467899999999999998766 56666655 454 7889999998864
No 141
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=91.41 E-value=0.63 Score=45.53 Aligned_cols=57 Identities=14% Similarity=0.131 Sum_probs=44.6
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCC-eEEEEEEC----C----eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-CISDVVCG----K----ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g-~v~~v~~~----g----~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|..+++ + ++ .|.+. | +++.+|.||+|++..
T Consensus 227 d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~-~~~~-~v~~~~~~~g~~~g~~~~~D~vi~a~G~~ 292 (478)
T 3dk9_A 227 DSMISTNCTEELENAGVEVLKFSQVKEVKKTLS-GLEV-SMVTAVPGRLPVMTMIPDVDCLLWAIGRV 292 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSS-SEEE-EEEECCTTSCCEEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcEE-EEEEccCCCCcccceEEEcCEEEEeeccc
Confidence 345778888889999999999999999987654 5 33 35553 2 578999999999864
No 142
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=91.10 E-value=0.24 Score=49.50 Aligned_cols=57 Identities=19% Similarity=0.225 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHh-cCcEEEcCceeeEEEecCCCC------eEEEEEE----CCe--EEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRT-RGCEFLDGRRVTDFIYDEERC------CISDVVC----GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g------~v~~v~~----~g~--~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++ .|++|+.++.|++|..+++ + +|++|.+ +|+ ++.||.||+|+....
T Consensus 139 ~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~-g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~ 208 (540)
T 1chu_A 139 EVETTLVSKALNHPNIRVLERTNAVDLIVSDK-IGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGAS 208 (540)
T ss_dssp ---CCCHHHHHHCTTEEEECSEEEEEEEEGGG-TTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCG
T ss_pred HHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCC-CCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcc
Confidence 477777888877 6999999999999998432 5 7777665 355 689999999999865
No 143
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=91.08 E-value=0.63 Score=42.85 Aligned_cols=54 Identities=15% Similarity=0.073 Sum_probs=41.0
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++|++++.|.+|..+ +++..|.+ +| +++.+|.||++++..
T Consensus 192 ~~~~~l~~~l~~~gv~v~~~~~v~~i~~~---~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 192 ASVKELMKAHEEGRLEVLTPYELRRVEGD---ERVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHHHHHHTTSSEEETTEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHHHhccccCCeEEecCCcceeEccC---CCeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 35677777788889999999999999874 33444554 45 578999999988753
No 144
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=91.08 E-value=0.57 Score=46.06 Aligned_cols=56 Identities=20% Similarity=0.234 Sum_probs=44.2
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC----C--eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----K--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~----g--~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +.+. |.+. | +++.+|.||+|++..
T Consensus 238 d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~--~~~~-v~~~~~~~g~~~~i~~D~Vi~a~G~~ 299 (491)
T 3urh_A 238 DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSG--DGAK-VTFEPVKGGEATTLDAEVVLIATGRK 299 (491)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEET--TEEE-EEEEETTSCCCEEEEESEEEECCCCE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeC--CEEE-EEEEecCCCceEEEEcCEEEEeeCCc
Confidence 44577888888999999999999999999876 4343 4432 4 579999999999864
No 145
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=91.05 E-value=0.49 Score=46.29 Aligned_cols=56 Identities=18% Similarity=0.297 Sum_probs=43.4
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEe--cCCCCeEEEEEEC------CeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIY--DEERCCISDVVCG------KETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~--~~~~g~v~~v~~~------g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|.. ++ +.+ .|.+. ++++.+|.||+|++..
T Consensus 223 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~ 286 (478)
T 1v59_A 223 DGEVAKATQKFLKKQGLDFKLSTKVISAKRNDDK--NVV-EIVVEDTKTNKQENLEAEVLLVAVGRR 286 (478)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTT--TEE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCC--CeE-EEEEEEcCCCCceEEECCEEEECCCCC
Confidence 345778888889999999999999999987 33 333 45442 3578999999999864
No 146
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=90.89 E-value=0.37 Score=48.61 Aligned_cols=54 Identities=13% Similarity=0.173 Sum_probs=44.1
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|..++ +. |++ +|+++.+|.||+|++..
T Consensus 227 ~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~--~~---v~~~~g~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 227 DYEMAAYVHEHMKNHDVELVFEDGVDALEENG--AV---VRLKSGSVIQTDMLILAIGVQ 281 (588)
T ss_dssp CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGG--TE---EEETTSCEEECSEEEECSCEE
T ss_pred CHHHHHHHHHHHHHcCCEEEECCeEEEEecCC--CE---EEECCCCEEEcCEEEEccCCC
Confidence 44578888889999999999999999998654 42 344 67789999999999863
No 147
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=90.83 E-value=0.22 Score=49.28 Aligned_cols=59 Identities=12% Similarity=0.027 Sum_probs=44.0
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~A~p~~~~ 195 (418)
.+.+.|.+.+++.|++|++++.|++|..+++++..+.|++ +| .++.||.||.|+.....
T Consensus 167 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~ 231 (497)
T 2bry_A 167 QLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFV 231 (497)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCC
T ss_pred HHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcc
Confidence 4667788888888999999999999987421022235655 44 47899999999998653
No 148
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=90.69 E-value=0.47 Score=44.76 Aligned_cols=58 Identities=14% Similarity=0.158 Sum_probs=46.2
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.|.+.|.+.+.+.|++|+++++|++|.. + + .|++ +|+++.||.||.|..... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~--~---~v~~~~g~~~~ad~vV~AdG~~s~vr~~l~ 167 (379)
T 3alj_A 108 HLHDALVNRARALGVDISVNSEAVAADP-V--G---RLTLQTGEVLEADLIVGADGVGSKVRDSIG 167 (379)
T ss_dssp HHHHHHHHHHHHTTCEEESSCCEEEEET-T--T---EEEETTSCEEECSEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhcCCEEEeCCEEEEEEe-C--C---EEEECCCCEEEcCEEEECCCccHHHHHHhc
Confidence 4678888888888999999999999987 4 6 2455 577899999999999865 355544
No 149
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=90.37 E-value=0.45 Score=47.62 Aligned_cols=56 Identities=23% Similarity=0.118 Sum_probs=44.6
Q ss_pred hhHHHHHHHHHhcCc--EEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~--~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|. +|+++++|+++..+++ +..+.|++ +|+++.||.||+|+...
T Consensus 100 ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~w~V~~~~G~~i~ad~lV~AtG~~ 158 (549)
T 4ap3_A 100 EILAYLEHVADRFDLRRDIRFDTRVTSAVLDEE-GLRWTVRTDRGDEVSARFLVVAAGPL 158 (549)
T ss_dssp HHHHHHHHHHHHTTCGGGEECSCCEEEEEEETT-TTEEEEEETTCCEEEEEEEEECCCSE
T ss_pred HHHHHHHHHHHHcCCCccEEECCEEEEEEEcCC-CCEEEEEECCCCEEEeCEEEECcCCC
Confidence 477777777788887 8999999999998774 33456777 56789999999999954
No 150
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=90.35 E-value=0.43 Score=47.66 Aligned_cols=56 Identities=30% Similarity=0.322 Sum_probs=44.8
Q ss_pred hhHHHHHHHHHhcCc--EEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~--~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|. +|+++++|+++..+++ +..+.|++ +|+++.||.||+|+...
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~-~~~~~V~~~~G~~i~ad~lV~AtG~~ 146 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLDD-ENLWEVTTDHGEVYRAKYVVNAVGLL 146 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEETT-TTEEEEEETTSCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeCC-CCEEEEEEcCCCEEEeCEEEECCccc
Confidence 477777777888887 8999999999998764 23456777 56789999999999964
No 151
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=90.30 E-value=0.54 Score=45.87 Aligned_cols=57 Identities=16% Similarity=0.235 Sum_probs=44.3
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|++++.|++|..++ +.+ .|.+ +| +++.+|.||+|++...
T Consensus 217 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~--~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p 279 (470)
T 1dxl_A 217 DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSG--DGV-KLTVEPSAGGEQTIIEADVVLVSAGRTP 279 (470)
T ss_dssp CHHHHHHHHHHHHHSSCCEECSEEEEEEECSS--SSE-EEEEEESSSCCCEEEEESEEECCCCEEE
T ss_pred cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcC--CeE-EEEEEecCCCcceEEECCEEEECCCCCc
Confidence 34577888888999999999999999998765 334 3443 34 5799999999998653
No 152
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=90.15 E-value=0.53 Score=43.98 Aligned_cols=55 Identities=15% Similarity=0.243 Sum_probs=44.3
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|+++++++.|++|..+++ +.+ .|.+ +|+++.+|+||+|+...
T Consensus 75 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~-~~~-~v~~~~g~~~~~~~li~AtG~~ 130 (360)
T 3ab1_A 75 DLVESLWAQAERYNPDVVLNETVTKYTKLDD-GTF-ETRTNTGNVYRSRAVLIAAGLG 130 (360)
T ss_dssp HHHHHHHHHHHTTCCEEECSCCEEEEEECTT-SCE-EEEETTSCEEEEEEEEECCTTC
T ss_pred HHHHHHHHHHHHhCCEEEcCCEEEEEEECCC-ceE-EEEECCCcEEEeeEEEEccCCC
Confidence 4777888888888999999999999998753 343 4666 46689999999999874
No 153
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=90.07 E-value=0.55 Score=43.24 Aligned_cols=54 Identities=17% Similarity=0.274 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|.++++++.|++|..++ +.+ .|.+ +|+++.+|+||+|+...
T Consensus 66 ~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 66 DLVKGLVEQVAPFNPVYSLGERAETLEREG--DLF-KVTTSQGNAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHHHHHGGGCCEEEESCCEEEEEEET--TEE-EEEETTSCEEEEEEEEECCTTS
T ss_pred HHHHHHHHHHHHcCCEEEeCCEEEEEEECC--CEE-EEEECCCCEEEeCEEEECCCCC
Confidence 467778788888899999999999999876 433 4666 46689999999999874
No 154
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=89.95 E-value=0.45 Score=47.09 Aligned_cols=57 Identities=12% Similarity=0.077 Sum_probs=42.6
Q ss_pred CcchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC----eEEecCEEEEccCh
Q 014807 133 TLREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK----ETYSAGAVVLAVGI 192 (418)
Q Consensus 133 G~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g----~~~~ad~VV~A~p~ 192 (418)
.+.+.+.+.+.+.|++.|++|++|++|++|..+ +.+..+.. +| +++.||.||+|+..
T Consensus 269 ~~~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~---~~~~~~~~~dg~~~~~~i~ad~viwa~Gv 330 (502)
T 4g6h_A 269 MFEKKLSSYAQSHLENTSIKVHLRTAVAKVEEK---QLLAKTKHEDGKITEETIPYGTLIWATGN 330 (502)
T ss_dssp TSCHHHHHHHHHHHHHTTCEEETTEEEEEECSS---EEEEEEECTTSCEEEEEEECSEEEECCCE
T ss_pred CCCHHHHHHHHHHHHhcceeeecCceEEEEeCC---ceEEEEEecCcccceeeeccCEEEEccCC
Confidence 455678888899999999999999999998642 32222222 33 46899999999864
No 155
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=89.78 E-value=0.63 Score=47.58 Aligned_cols=56 Identities=18% Similarity=0.245 Sum_probs=45.7
Q ss_pred hhHHHHHHHHHhc-Cc-EEEcCceeeEEEecCCCC---eEEEEEE----CCe--EEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTR-GC-EFLDGRRVTDFIYDEERC---CISDVVC----GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~-G~-~I~l~t~V~~I~~~~~~g---~v~~v~~----~g~--~~~ad~VV~A~p~~~ 194 (418)
.+...|.+.+++. |+ +|+.++.|.+|..++ + +|++|.. +|+ ++.|+.||+|+....
T Consensus 152 ~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~--~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~ 218 (643)
T 1jnr_A 152 SYKPIIAEAAKMAVGEENIYERVFIFELLKDN--NDPNAVAGAVGFSVREPKFYVFKAKAVILATGGAT 218 (643)
T ss_dssp THHHHHHHHHHHHHCGGGEECSEEEEEEEECT--TCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEecCEEEEEEEcC--CccceeEEEEEEEecCCcEEEEEcCEEEECCCccc
Confidence 4777888888877 99 999999999999876 5 7888764 344 689999999998765
No 156
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=89.69 E-value=0.41 Score=45.74 Aligned_cols=53 Identities=11% Similarity=0.038 Sum_probs=42.0
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|+++++++.|++|.. +.| +..+|+++.+|.||++++..
T Consensus 217 ~~~~~~~~~~~l~~~gV~~~~~~~v~~i~~----~~v--~~~~g~~~~~D~vi~a~G~~ 269 (409)
T 3h8l_A 217 SPNSRKAVASIYNQLGIKLVHNFKIKEIRE----HEI--VDEKGNTIPADITILLPPYT 269 (409)
T ss_dssp CHHHHHHHHHHHHHHTCEEECSCCEEEECS----SEE--EETTSCEEECSEEEEECCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEcCCceEEECC----CeE--EECCCCEEeeeEEEECCCCC
Confidence 345778888889999999999999999863 222 23467899999999998753
No 157
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=89.51 E-value=0.59 Score=42.47 Aligned_cols=57 Identities=11% Similarity=0.184 Sum_probs=43.2
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++++.+++|+.|..+.+++..+.|.+ +|+++.+|+||+|+...
T Consensus 57 ~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~ 114 (310)
T 1fl2_A 57 KLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAK 114 (310)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCC
Confidence 4677787888888999999999999976531011245666 46689999999999974
No 158
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=89.50 E-value=0.76 Score=45.87 Aligned_cols=56 Identities=18% Similarity=0.101 Sum_probs=46.0
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccCh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 192 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~ 192 (418)
+...+.+.+.+.+++.|++|++++.|+++...+ +.+. |.+ +++++.+|.|++|+.-
T Consensus 261 ~D~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~--~~~~-v~~~~~~~~~~D~vLvAvGR 317 (542)
T 4b1b_A 261 FDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD--DKIL-VEFSDKTSELYDTVLYAIGR 317 (542)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEETCCEEEEEEET--TEEE-EEETTSCEEEESEEEECSCE
T ss_pred cchhHHHHHHHHHHhhcceeecceEEEEEEecC--CeEE-EEEcCCCeEEEEEEEEcccc
Confidence 345578889999999999999999999999877 5553 555 5678899999999975
No 159
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=89.25 E-value=0.55 Score=43.18 Aligned_cols=53 Identities=17% Similarity=0.256 Sum_probs=43.3
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++++.++ |.+|..++ +.+ .|.++|+++.+|.||+|+...
T Consensus 71 ~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~--~~~-~v~~~~~~~~~~~vv~A~G~~ 123 (333)
T 1vdc_A 71 ELTDKFRKQSERFGTTIFTET-VTKVDFSS--KPF-KLFTDSKAILADAVILAIGAV 123 (333)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-CCEEECSS--SSE-EEECSSEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEeE-EEEEEEcC--CEE-EEEECCcEEEcCEEEECCCCC
Confidence 477788888888899999997 99998766 434 355678899999999999985
No 160
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=89.24 E-value=0.71 Score=41.94 Aligned_cols=50 Identities=10% Similarity=0.248 Sum_probs=36.5
Q ss_pred HHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEEC----Ce--EEecCEEEEccCh
Q 014807 141 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TYSAGAVVLAVGI 192 (418)
Q Consensus 141 ~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~~----g~--~~~ad~VV~A~p~ 192 (418)
.+.+.+.+ .|++|++++.|++|..++ +++.+|++. |+ ++.+|.||++++.
T Consensus 184 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 240 (310)
T 1fl2_A 184 VLQDKLRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHNIELAGIFVQIGL 240 (310)
T ss_dssp HHHHHHHTCTTEEEESSEEEEEEEESS--SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEecCCceEEEEcCC--CcEEEEEEEECCCCcEEEEEcCEEEEeeCC
Confidence 45556666 699999999999998765 556555552 43 6789999998753
No 161
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=89.14 E-value=0.61 Score=45.57 Aligned_cols=57 Identities=12% Similarity=0.101 Sum_probs=42.7
Q ss_pred hhHHHHHHHHHhcCcE--EEcCceeeEEEecCCCCeEEEEEE-C---C--eEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCE--FLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~--I~l~t~V~~I~~~~~~g~v~~v~~-~---g--~~~~ad~VV~A~p~~~ 194 (418)
.+.+.+.+.+++.|++ |++++.|++|..++++++ +.|++ + | .++.+|+||+|+....
T Consensus 102 ~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~-~~V~~~~~~~g~~~~~~~d~VVvAtG~~s 166 (464)
T 2xve_A 102 VLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQT-FTVTVQDHTTDTIYSEEFDYVVCCTGHFS 166 (464)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTE-EEEEEEETTTTEEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCc-EEEEEEEcCCCceEEEEcCEEEECCCCCC
Confidence 4677777777778887 999999999998763123 34554 2 4 5789999999999643
No 162
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=88.98 E-value=1 Score=44.17 Aligned_cols=57 Identities=18% Similarity=0.202 Sum_probs=43.3
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C---Ce--EEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~---g~--~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|++|...++ +.+ .|++ + |+ ++.+|.||+|++..
T Consensus 224 d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~-~~~-~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 224 DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPT-NQL-QVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTT-SCE-EEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCC-CcE-EEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 345778888889999999999999999987543 444 2433 2 44 47899999999864
No 163
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=88.82 E-value=0.27 Score=45.45 Aligned_cols=42 Identities=14% Similarity=0.276 Sum_probs=30.8
Q ss_pred CCCCCCEEEecccccc---CCCc-cchHHHHHHHHHHHHHHHHHhC
Q 014807 335 FTSFPNLFMAGDWITT---RHGS-WSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 335 ~~~~~~l~laGd~~~~---~~g~-~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.|.+||||.|||.+.. .+.. .+.-+++.||+.||+.|++.+.
T Consensus 280 ~t~vpGv~aaGDaa~~v~g~~rmGp~~g~mi~SG~~AAe~I~~~la 325 (326)
T 3fpz_A 280 YAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp CTTSBTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred EECCCCEEEEchHhccccCCCcCchHHHHHHHHHHHHHHHHHHHhc
Confidence 4678999999997521 1111 2455678999999999999874
No 164
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=88.69 E-value=0.54 Score=44.73 Aligned_cols=47 Identities=13% Similarity=0.056 Sum_probs=37.5
Q ss_pred HHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccCh
Q 014807 141 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 192 (418)
Q Consensus 141 ~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~ 192 (418)
...+.+++.|++++++++|++|..++ .. |++ +|+++.+|++|+|+..
T Consensus 67 ~~~~~~~~~~i~~~~~~~V~~id~~~--~~---v~~~~g~~~~yd~lvlAtG~ 114 (385)
T 3klj_A 67 KKNDWYEKNNIKVITSEFATSIDPNN--KL---VTLKSGEKIKYEKLIIASGS 114 (385)
T ss_dssp SCHHHHHHTTCEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCE
T ss_pred CCHHHHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEecCC
Confidence 34455667899999999999998765 43 344 6779999999999986
No 165
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=88.63 E-value=0.98 Score=45.06 Aligned_cols=60 Identities=15% Similarity=0.215 Sum_probs=45.3
Q ss_pred HHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEEC----Ce--EE---ecCEEEEccChhhHHHhhccc
Q 014807 141 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVCG----KE--TY---SAGAVVLAVGISTLQELIKNS 202 (418)
Q Consensus 141 ~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~~----g~--~~---~ad~VV~A~p~~~~~~Ll~~~ 202 (418)
.+.+.+.+ .+++|++++.|++|..++ +++++|.+. |+ ++ .++.||+|+.+....+|+...
T Consensus 200 ~~l~~~~~~~~~~i~~~~~V~~i~~~~--~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~sp~lL~~s 269 (546)
T 1kdg_A 200 TYLQTALARPNFTFKTNVMVSNVVRNG--SQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFGTSRILFQS 269 (546)
T ss_dssp THHHHHHTCTTEEEECSCCEEEEEEET--TEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHHHHHHHHHT
T ss_pred HHHHHHhhCCCcEEEeCCEEEEEEEeC--CEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhcCHHHHHHc
Confidence 34444444 588999999999999876 788898872 43 33 789999999998777665443
No 166
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=88.59 E-value=0.27 Score=47.45 Aligned_cols=50 Identities=8% Similarity=-0.053 Sum_probs=38.3
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCeEEecCEEEEccCh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKETYSAGAVVLAVGI 192 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~~~~ad~VV~A~p~ 192 (418)
+.+.+.+.+++.|++|++++.|++|.. +.++ +.. +++++.+|.||++++.
T Consensus 202 ~~~~l~~~l~~~GV~i~~~~~v~~v~~----~~v~-~~~~~~~g~~i~~D~vv~a~G~ 254 (430)
T 3h28_A 202 SKRLVEDLFAERNIDWIANVAVKAIEP----DKVI-YEDLNGNTHEVPAKFTMFMPSF 254 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEECS----SEEE-EECTTSCEEEEECSEEEEECEE
T ss_pred HHHHHHHHHHHCCCEEEeCCEEEEEeC----CeEE-EEecCCCceEEeeeEEEECCCC
Confidence 667888889999999999999999863 2232 222 1568999999999764
No 167
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=88.58 E-value=0.65 Score=47.18 Aligned_cols=55 Identities=16% Similarity=0.091 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHhc-CcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~-G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
.+.+.|.+.+++. |++|. +..|+.|..++ ++|++|.+ +|+++.||.||+|+....
T Consensus 118 ~l~~~L~~~l~~~~GV~I~-~~~V~~L~~d~--g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 118 QYSLYMRRIVEHEPNIDLL-QDTVIGVSANS--GKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp HHHHHHHHHHHTCTTEEEE-ECCEEEEEEET--TEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred HHHHHHHHHHHhCCCCEEE-eeEEEEEEecC--CEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 4677788888774 88985 56999998876 67877777 567899999999999764
No 168
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=88.44 E-value=1.4 Score=43.31 Aligned_cols=55 Identities=22% Similarity=0.131 Sum_probs=43.3
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CC--eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g--~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++. ++|++++.|++|..++ +.+. +.+ +| +++.+|.||+|++..
T Consensus 214 d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~--~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~ 273 (492)
T 3ic9_A 214 DEEMKRYAEKTFNEE-FYFDAKARVISTIEKE--DAVE-VIYFDKSGQKTTESFQYVLAATGRK 273 (492)
T ss_dssp CHHHHHHHHHHHHTT-SEEETTCEEEEEEECS--SSEE-EEEECTTCCEEEEEESEEEECSCCE
T ss_pred CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcC--CEEE-EEEEeCCCceEEEECCEEEEeeCCc
Confidence 345777888888877 9999999999999876 4454 444 56 679999999999864
No 169
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=88.41 E-value=0.76 Score=44.52 Aligned_cols=55 Identities=16% Similarity=-0.095 Sum_probs=41.5
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C---Ce---EEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE---TYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~---g~---~~~ad~VV~A~p~~~ 194 (418)
.+.+.+.+.+++.+..|++++.|++|..++ +.+ .|++ + |+ ++.+|+||+|+..+.
T Consensus 116 ~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~--~~~-~V~~~~~~~G~~~~~~~~d~VVvAtG~~s 177 (447)
T 2gv8_A 116 TIQEYQRIYAQPLLPFIKLATDVLDIEKKD--GSW-VVTYKGTKAGSPISKDIFDAVSICNGHYE 177 (447)
T ss_dssp HHHHHHHHHHGGGGGGEECSEEEEEEEEET--TEE-EEEEEESSTTCCEEEEEESEEEECCCSSS
T ss_pred HHHHHHHHHHHHhhCeEEeCCEEEEEEeCC--CeE-EEEEeecCCCCeeEEEEeCEEEECCCCCC
Confidence 466666666666677899999999998776 433 4554 2 55 789999999999854
No 170
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=88.14 E-value=0.68 Score=46.30 Aligned_cols=56 Identities=16% Similarity=0.119 Sum_probs=43.9
Q ss_pred hhHHHHHHHHHhcCc--EEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGC--EFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~--~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|. +|+++++|+++..+++ +..+.|++ +|+++.||.||+|+...
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~-~~~w~V~~~~G~~~~ad~lV~AtG~~ 146 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVEN-DRLWEVTLDNEEVVTCRFLISATGPL 146 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGG-GTEEEEEETTTEEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCC-CCEEEEEECCCCEEEeCEEEECcCCC
Confidence 466777777777776 8999999999998764 23456777 57789999999999964
No 171
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=88.13 E-value=0.79 Score=44.41 Aligned_cols=56 Identities=18% Similarity=0.265 Sum_probs=45.0
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++. +++++++.|.+|..++ ++..+..+++++.+|.||+|++..
T Consensus 188 ~~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~---~v~~v~~~g~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 188 FDKEVTDILEEKLKKH-VNLRLQEITMKIEGEE---RVEKVVTDAGEYKAELVILATGIK 243 (449)
T ss_dssp SCHHHHHHHHHHHTTT-SEEEESCCEEEEECSS---SCCEEEETTEEEECSEEEECSCEE
T ss_pred cCHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC---cEEEEEeCCCEEECCEEEEeeCCc
Confidence 4455777888888888 9999999999997543 344566788899999999999864
No 172
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=87.83 E-value=0.34 Score=49.97 Aligned_cols=54 Identities=11% Similarity=0.053 Sum_probs=38.8
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+.+.+.+.+++.|++|+++++|++|..++ ..+..+.. +++++.+|.||+|++..
T Consensus 569 ~~~~l~~~l~~~GV~i~~~~~V~~i~~~~--~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 569 EVNRIQRRLIENGVARVTDHAVVAVGAGG--VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp CHHHHHHHHHHTTCEEEESEEEEEEETTE--EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred hHHHHHHHHHHCCCEEEcCcEEEEEECCe--EEEEEccCCeEEEEECCEEEECCCCC
Confidence 45677888899999999999999997432 22211112 34578999999999763
No 173
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=87.76 E-value=0.6 Score=46.02 Aligned_cols=50 Identities=16% Similarity=0.276 Sum_probs=39.4
Q ss_pred HHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 142 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 142 l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
+.+.+++.|++|++++.|++|..++ + +..|.+ +|+++.+|.||++++...
T Consensus 263 le~~l~~~GV~v~~~~~v~~i~~~~--~-v~~v~~~~g~~i~aD~Vv~a~G~~p 313 (493)
T 1y56_A 263 VIQELERWGIDYVHIPNVKRVEGNE--K-VERVIDMNNHEYKVDALIFADGRRP 313 (493)
T ss_dssp HHHHHHHHTCEEEECSSEEEEECSS--S-CCEEEETTCCEEECSEEEECCCEEE
T ss_pred HHHHHHhCCcEEEeCCeeEEEecCC--c-eEEEEeCCCeEEEeCEEEECCCcCc
Confidence 3367788899999999999998543 3 445666 567899999999998753
No 174
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.73 E-value=1.4 Score=39.95 Aligned_cols=50 Identities=18% Similarity=0.194 Sum_probs=36.1
Q ss_pred HHHHHHH-hcCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccCh
Q 014807 141 PWMDSMR-TRGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 141 ~l~~~l~-~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~ 192 (418)
.+.+.+. +.|++|++++.|++|..++ +++.+|++ +|+ ++.+|.||++++.
T Consensus 183 ~~~~~l~~~~gv~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 239 (311)
T 2q0l_A 183 ITLEHAKNNDKIEFLTPYVVEEIKGDA--SGVSSLSIKNTATNEKRELVVPGFFIFVGY 239 (311)
T ss_dssp HHHHHHHTCTTEEEETTEEEEEEEEET--TEEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHHhhCCCeEEEeCCEEEEEECCC--CcEeEEEEEecCCCceEEEecCEEEEEecC
Confidence 3455555 4699999999999998765 44544554 354 6899999998853
No 175
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=87.72 E-value=1.7 Score=42.10 Aligned_cols=42 Identities=21% Similarity=0.130 Sum_probs=32.9
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChh
Q 014807 149 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGIS 193 (418)
Q Consensus 149 ~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~ 193 (418)
.|++|++++.|++|..++ +.+ .|++ +|+ ++.+|.||+|+...
T Consensus 329 ~~v~i~~~~~v~~v~~~~--~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATA--QGI-ELALRDAGSGELSVETYDAVILATGYE 376 (463)
T ss_dssp CCSEEETTEEEEEEEEET--TEE-EEEEEETTTCCEEEEEESEEEECCCEE
T ss_pred CCeEEEeCCEEEEEEecC--CEE-EEEEEEcCCCCeEEEECCEEEEeeCCC
Confidence 589999999999998876 433 3444 354 48999999999874
No 176
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=87.53 E-value=0.98 Score=42.86 Aligned_cols=58 Identities=10% Similarity=0.096 Sum_probs=42.9
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhH-HHhhc
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL-QELIK 200 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~-~~Ll~ 200 (418)
+.+.|.+.+ .|++|+++++|++|..++ +.++ |++ +|+++.||.||.|...... .+.+.
T Consensus 101 l~~~L~~~~--~~~~i~~~~~v~~i~~~~--~~v~-v~~~~g~~~~ad~vV~AdG~~S~vr~~~~ 160 (397)
T 2vou_A 101 IYGGLYELF--GPERYHTSKCLVGLSQDS--ETVQ-MRFSDGTKAEANWVIGADGGASVVRKRLL 160 (397)
T ss_dssp HHHHHHHHH--CSTTEETTCCEEEEEECS--SCEE-EEETTSCEEEESEEEECCCTTCHHHHHHH
T ss_pred HHHHHHHhC--CCcEEEcCCEEEEEEecC--CEEE-EEECCCCEEECCEEEECCCcchhHHHHhc
Confidence 445555444 388999999999999876 4454 566 5778999999999998764 55554
No 177
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=87.25 E-value=0.8 Score=46.92 Aligned_cols=58 Identities=16% Similarity=0.198 Sum_probs=45.9
Q ss_pred hhHHHHHHHHHhc--CcEEEcCceeeEEEecCC-CCeEEEEEE----CCe--EEecCEEEEccChhh
Q 014807 137 KIFEPWMDSMRTR--GCEFLDGRRVTDFIYDEE-RCCISDVVC----GKE--TYSAGAVVLAVGIST 194 (418)
Q Consensus 137 ~l~~~l~~~l~~~--G~~I~l~t~V~~I~~~~~-~g~v~~v~~----~g~--~~~ad~VV~A~p~~~ 194 (418)
.+...|.+.+++. |++|+.++.|.+|..+++ .|+|.+|.. +|+ ++.|+.||+|+....
T Consensus 167 ~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g 233 (662)
T 3gyx_A 167 SYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAV 233 (662)
T ss_dssp SHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBC
T ss_pred HHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccc
Confidence 4778888888887 999999999999998761 027888754 343 589999999999754
No 178
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=87.13 E-value=1.1 Score=40.54 Aligned_cols=53 Identities=19% Similarity=0.327 Sum_probs=41.8
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+.+.|++++. +.|.+|..++ +.+ .|.+ +|+++.+|.||+|+...
T Consensus 60 ~~~~~l~~~~~~~~v~~~~-~~v~~i~~~~--~~~-~v~~~~g~~~~~~~vv~AtG~~ 113 (311)
T 2q0l_A 60 DFMQPWQEQCFRFGLKHEM-TAVQRVSKKD--SHF-VILAEDGKTFEAKSVIIATGGS 113 (311)
T ss_dssp HHHHHHHHHHHTTSCEEEC-SCEEEEEEET--TEE-EEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-EEEEEEEEcC--CEE-EEEEcCCCEEECCEEEECCCCC
Confidence 4677777778888999998 7899998876 433 3544 57789999999999964
No 179
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=86.75 E-value=0.91 Score=41.26 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=42.4
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC-CeEEecCEEEEccChh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG-KETYSAGAVVLAVGIS 193 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~-g~~~~ad~VV~A~p~~ 193 (418)
..+.+.+.+.+++.|+++++ +.|.+|..++ +.+ .|.++ |+++.+|+||+|+...
T Consensus 70 ~~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~-~v~~~~g~~~~~d~lvlAtG~~ 124 (323)
T 3f8d_A 70 SDMIKVFNKHIEKYEVPVLL-DIVEKIENRG--DEF-VVKTKRKGEFKADSVILGIGVK 124 (323)
T ss_dssp HHHHHHHHHHHHTTTCCEEE-SCEEEEEEC----CE-EEEESSSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHHHcCCEEEE-EEEEEEEecC--CEE-EEEECCCCEEEcCEEEECcCCC
Confidence 34777888888888999999 9999999876 444 46664 5789999999999876
No 180
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=86.53 E-value=1 Score=41.00 Aligned_cols=52 Identities=17% Similarity=0.195 Sum_probs=38.4
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+.........+.+..+..+..+....... . ..+..+++++++|++|+|+...
T Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~d~liiAtGs~ 115 (312)
T 4gcm_A 64 LSTKMFEHAKKFGAVYQYGDIKSVEDKGE--Y--KVINFGNKELTAKAVIIATGAE 115 (312)
T ss_dssp HHHHHHHHHHHTTCEEEECCCCEEEECSS--C--EEEECSSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHhhccccccceeeeeeeeeec--c--eeeccCCeEEEeceeEEcccCc
Confidence 55556666677788888888777766544 3 2356678899999999999964
No 181
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=86.02 E-value=1.2 Score=44.28 Aligned_cols=56 Identities=9% Similarity=0.193 Sum_probs=43.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCC-CCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~-~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++++.+++|++|..+.+ ++. +.|.+ +|+++.+|+||+|+...
T Consensus 268 ~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~-~~V~~~~g~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 268 KLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGL-HQIETASGAVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSC-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCce-EEEEECCCCEEEcCEEEECCCCC
Confidence 4677788888889999999999999976421 123 34666 56789999999999974
No 182
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=86.02 E-value=0.78 Score=45.85 Aligned_cols=53 Identities=21% Similarity=0.310 Sum_probs=41.8
Q ss_pred hcCcEEEcCceeeEEEecCCCCeEEEEEE-C---Ce--EEecC-EEEEccChhhHHHhhcc
Q 014807 148 TRGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAG-AVVLAVGISTLQELIKN 201 (418)
Q Consensus 148 ~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~---g~--~~~ad-~VV~A~p~~~~~~Ll~~ 201 (418)
+.|++|++++.|++|..+++ +++++|.+ + |+ ++.|+ .||+|+.+....+|+..
T Consensus 221 ~~~~~i~~~~~V~~i~~~~~-~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~~sp~lL~~ 280 (546)
T 2jbv_A 221 QENFTLLTGLRARQLVFDAD-RRCTGVDIVDSAFGHTHRLTARNEVVLSTGAIDTPKLLML 280 (546)
T ss_dssp CTTEEEECSCEEEEEEECTT-SBEEEEEEESSTTSCEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCCcEEEeCCEEEEEEECCC-CeEEEEEEEECCCCcEEEEEeCccEEEecCccCCchhhhh
Confidence 46899999999999998764 56888876 2 43 68898 99999999766666543
No 183
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=85.93 E-value=1.8 Score=40.32 Aligned_cols=57 Identities=16% Similarity=0.258 Sum_probs=41.8
Q ss_pred hHHHHHHHHHh-cCcEEEcCceeeEEEecCC---------------CC--eEEEEEEC-------C--------eEEecC
Q 014807 138 IFEPWMDSMRT-RGCEFLDGRRVTDFIYDEE---------------RC--CISDVVCG-------K--------ETYSAG 184 (418)
Q Consensus 138 l~~~l~~~l~~-~G~~I~l~t~V~~I~~~~~---------------~g--~v~~v~~~-------g--------~~~~ad 184 (418)
+.+.|.+.+.+ .|++|+.++.|.+|..+++ +| +|.+|.++ + .++.|+
T Consensus 162 ~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~~~~~d~~~i~Ak 241 (344)
T 3jsk_A 162 FTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDDQSAMDPNTINAP 241 (344)
T ss_dssp HHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSSSSCCBCEEEECS
T ss_pred HHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCcccccCceEEEcC
Confidence 55777777777 4899999999999987651 02 66676541 2 368899
Q ss_pred EEEEccChhh
Q 014807 185 AVVLAVGIST 194 (418)
Q Consensus 185 ~VV~A~p~~~ 194 (418)
.||.|+....
T Consensus 242 ~VV~ATG~~s 251 (344)
T 3jsk_A 242 VIISTTGHDG 251 (344)
T ss_dssp EEEECCCSSS
T ss_pred EEEECCCCCc
Confidence 9999988653
No 184
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=85.92 E-value=1.7 Score=39.78 Aligned_cols=47 Identities=13% Similarity=0.178 Sum_probs=34.0
Q ss_pred HHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CC--eEEecCEEEEccCh
Q 014807 146 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GK--ETYSAGAVVLAVGI 192 (418)
Q Consensus 146 l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g--~~~~ad~VV~A~p~ 192 (418)
+++.|++|++++.|++|..+++++++..|.+ +| +++.+|.||++++.
T Consensus 205 ~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 205 LSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 4568999999999999987541005544554 34 46899999998864
No 185
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=85.90 E-value=1.3 Score=44.24 Aligned_cols=55 Identities=16% Similarity=0.018 Sum_probs=40.9
Q ss_pred hHHHHHHHHHhcC--cEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRG--CEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G--~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+.+.+...+++.+ .+|+++++|+++..+++++ .+.|++ +|+++.||.||+|+...
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~~~ad~vV~AtG~~ 153 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGDRIRARYLIMASGQL 153 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCCEEEEEEEEECCCSC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCCEEEeCEEEECcCCC
Confidence 5555555555554 5799999999999876423 355777 46689999999999964
No 186
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=85.64 E-value=1.3 Score=40.57 Aligned_cols=53 Identities=17% Similarity=0.251 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE----CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC----GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|+++++++ |.+|..++ +.+ .+.+ ++.++.+|.||+|+...
T Consensus 85 ~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~--~~~-~v~~~~~~~~~~~~~d~vvlAtG~~ 141 (338)
T 3itj_A 85 ELMDRMREQSTKFGTEIITET-VSKVDLSS--KPF-KLWTEFNEDAEPVTTDAIILATGAS 141 (338)
T ss_dssp HHHHHHHHHHHHTTCEEECSC-EEEEECSS--SSE-EEEETTCSSSCCEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEeE-EEEEEEcC--CEE-EEEEEecCCCcEEEeCEEEECcCCC
Confidence 577888888888999999999 99998876 444 3555 45689999999999873
No 187
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=85.60 E-value=1.4 Score=40.24 Aligned_cols=49 Identities=14% Similarity=0.234 Sum_probs=36.0
Q ss_pred HHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C-----CeEEecCEEEEccCh
Q 014807 141 PWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G-----KETYSAGAVVLAVGI 192 (418)
Q Consensus 141 ~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~-----g~~~~ad~VV~A~p~ 192 (418)
...+.+++.|+++++++.|.+|..++ + +..|++ + ++++.+|.||++++.
T Consensus 194 ~~~~~l~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 248 (332)
T 3lzw_A 194 HSVENLHASKVNVLTPFVPAELIGED--K-IEQLVLEEVKGDRKEILEIDDLIVNYGF 248 (332)
T ss_dssp HHHHHHHHSSCEEETTEEEEEEECSS--S-CCEEEEEETTSCCEEEEECSEEEECCCE
T ss_pred HHHHHHhcCCeEEEeCceeeEEecCC--c-eEEEEEEecCCCceEEEECCEEEEeecc
Confidence 34456788999999999999998765 3 234544 2 346899999998763
No 188
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=85.42 E-value=0.99 Score=43.91 Aligned_cols=54 Identities=20% Similarity=0.292 Sum_probs=42.6
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC--eEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g--~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|+++++|++|.. + + +. +.. +| +++.+|.||+|++..
T Consensus 211 ~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~--~-v~-v~~~~G~~~~i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 211 DSELTAPVAESLKKLGIALHLGHSVEGYEN-G--C-LL-ANDGKGGQLRLEADRVLVAVGRR 267 (458)
T ss_dssp CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T--E-EE-EECSSSCCCEECCSCEEECCCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C--C-EE-EEECCCceEEEECCEEEECcCCC
Confidence 345778888888899999999999999986 4 4 43 443 35 579999999999864
No 189
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=84.85 E-value=1.1 Score=43.50 Aligned_cols=56 Identities=11% Similarity=-0.046 Sum_probs=39.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEE--EEEE-CCe----EEecCEEEEccCh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCIS--DVVC-GKE----TYSAGAVVLAVGI 192 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~--~v~~-~g~----~~~ad~VV~A~p~ 192 (418)
.+.+.+....++.|.+|+++++|++|..++++++.+ .|++ +|+ ++.||+||+|+..
T Consensus 128 ~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lVlAtG~ 190 (463)
T 3s5w_A 128 EFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALVVSPGG 190 (463)
T ss_dssp HHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEEECCCC
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEEECCCC
Confidence 355666666667788999999999998762112333 3443 343 7899999999996
No 190
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=84.84 E-value=2.3 Score=38.77 Aligned_cols=50 Identities=14% Similarity=0.080 Sum_probs=35.5
Q ss_pred HHHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccCh
Q 014807 140 EPWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 140 ~~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~ 192 (418)
..+.+.+.+ .|++|+++++|++|..+ +++.+|.+ +|+ ++.+|.||+|++.
T Consensus 191 ~~~~~~l~~~~gv~i~~~~~v~~i~~~---~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 247 (325)
T 2q7v_A 191 KVAQARAFANPKMKFIWDTAVEEIQGA---DSVSGVKLRNLKTGEVSELATDGVFIFIGH 247 (325)
T ss_dssp HHHHHHHHTCTTEEEECSEEEEEEEES---SSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred hHHHHHHHhcCCceEecCCceEEEccC---CcEEEEEEEECCCCcEEEEEcCEEEEccCC
Confidence 334455544 59999999999999864 33545554 354 6899999998864
No 191
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=84.21 E-value=1.9 Score=40.52 Aligned_cols=52 Identities=19% Similarity=0.221 Sum_probs=40.8
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|+++++|++|. . .. |++ +|+ +.+|.||+|++..
T Consensus 181 ~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~--~~---v~~~~g~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 181 LDEELSNMIKDMLEETGVKFFLNSELLEAN--E--EG---VLTNSGF-IEGKVKICAIGIV 233 (367)
T ss_dssp CCHHHHHHHHHHHHHTTEEEECSCCEEEEC--S--SE---EEETTEE-EECSCEEEECCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEcCCEEEEEE--e--eE---EEECCCE-EEcCEEEECcCCC
Confidence 334577888888999999999999999997 2 32 345 455 9999999999854
No 192
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=84.21 E-value=1.4 Score=40.92 Aligned_cols=54 Identities=11% Similarity=0.110 Sum_probs=39.9
Q ss_pred hhHHHHHHHHHhcC-cEEEcCceeeEEEecCCCCeEEEEEE-CCeEEe-cCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRG-CEFLDGRRVTDFIYDEERCCISDVVC-GKETYS-AGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G-~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~-ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.| ++|++++.|.+|..++ +.+ .|++ +|+++. +|.||++++..
T Consensus 215 ~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~--~~~-~v~~~~g~~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 215 YTRQRLGNVIKQGARIEMNVHYTVKDIDFNN--GQY-HISFDSGQSVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHHHHHHHTTCCEEEECSCCEEEEEEET--TEE-EEEESSSCCEEESSCCEECCCBC
T ss_pred HHHHHHHHHHhhCCcEEEecCcEEEEEEecC--Cce-EEEecCCeEeccCCceEEeeccC
Confidence 34567777788887 9999999999997655 433 4555 566554 69999998754
No 193
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=84.09 E-value=1.8 Score=39.39 Aligned_cols=53 Identities=15% Similarity=0.176 Sum_probs=42.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++++. +.|.+|..++ +.+ .|.++++++.+|.||+|+...
T Consensus 73 ~~~~~~~~~~~~~~v~~~~-~~v~~i~~~~--~~~-~v~~~~~~~~~~~li~AtG~~ 125 (319)
T 3cty_A 73 ELAKLFADHAANYAKIREG-VEVRSIKKTQ--GGF-DIETNDDTYHAKYVIITTGTT 125 (319)
T ss_dssp HHHHHHHHHHHTTSEEEET-CCEEEEEEET--TEE-EEEESSSEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEE-eeEEEEEEeC--CEE-EEEECCCEEEeCEEEECCCCC
Confidence 4677777788888999998 7899998866 434 366677889999999999964
No 194
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=84.00 E-value=2.6 Score=38.89 Aligned_cols=40 Identities=10% Similarity=0.189 Sum_probs=29.9
Q ss_pred hhHHHHHHHHHhc-CcEEEcCceeeEEEecCC-C-C--eEEEEEE
Q 014807 137 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEE-R-C--CISDVVC 176 (418)
Q Consensus 137 ~l~~~l~~~l~~~-G~~I~l~t~V~~I~~~~~-~-g--~v~~v~~ 176 (418)
.+.+.|.+.+.+. |++|+.++.|++|..+++ + | +|.+|.+
T Consensus 147 ~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv 191 (326)
T 2gjc_A 147 LFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVT 191 (326)
T ss_dssp HHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEE
T ss_pred HHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEe
Confidence 3667787777775 899999999999988731 1 3 7877765
No 195
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=83.75 E-value=1.5 Score=42.17 Aligned_cols=50 Identities=10% Similarity=-0.012 Sum_probs=37.8
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---C-----CeEEecCEEEEccCh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---G-----KETYSAGAVVLAVGI 192 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~-----g~~~~ad~VV~A~p~ 192 (418)
+.+.+.+.+++.|+++++++.|++|.. +.++ +.. + ++++.+|.||++++.
T Consensus 210 ~~~~~~~~l~~~gI~~~~~~~v~~v~~----~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~g~ 267 (437)
T 3sx6_A 210 SKGILTKGLKEEGIEAYTNCKVTKVED----NKMY-VTQVDEKGETIKEMVLPVKFGMMIPAF 267 (437)
T ss_dssp HHHHHHHHHHHTTCEEECSEEEEEEET----TEEE-EEEECTTSCEEEEEEEECSEEEEECCE
T ss_pred HHHHHHHHHHHCCCEEEcCCEEEEEEC----CeEE-EEecccCCccccceEEEEeEEEEcCCC
Confidence 667788888999999999999999963 2232 222 2 457899999999763
No 196
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=83.69 E-value=1.5 Score=42.38 Aligned_cols=53 Identities=11% Similarity=0.139 Sum_probs=42.2
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.+.+++.|++|++++.|+++.. ..+ +..+|+++.+|.||+|++..
T Consensus 187 d~~~~~~~~~~l~~~gV~i~~~~~v~~~~~----~~v--~~~~g~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 187 DADMNQPILDELDKREIPYRLNEEINAING----NEI--TFKSGKVEHYDMIIEGVGTH 239 (437)
T ss_dssp CGGGGHHHHHHHHHTTCCEEESCCEEEEET----TEE--EETTSCEEECSEEEECCCEE
T ss_pred cchhHHHHHHHhhccceEEEeccEEEEecC----Cee--eecCCeEEeeeeEEEEecee
Confidence 445788899999999999999999998752 322 23468899999999999853
No 197
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=83.66 E-value=2.1 Score=38.80 Aligned_cols=53 Identities=13% Similarity=0.185 Sum_probs=41.9
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+.+.|++++.++ |..|..++ +.+ .+..+++++.+|+||+|+...
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~-v~~i~~~~--~~~-~v~~~~~~~~~~~lv~AtG~~ 115 (320)
T 1trb_A 63 LLMERMHEHATKFETEIIFDH-INKVDLQN--RPF-RLNGDNGEYTCDALIIATGAS 115 (320)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSS--SSE-EEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHCCCEEEEee-eeEEEecC--CEE-EEEeCCCEEEcCEEEECCCCC
Confidence 467777778888899999997 99998765 444 344567889999999999874
No 198
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=83.59 E-value=0.67 Score=44.69 Aligned_cols=52 Identities=8% Similarity=-0.052 Sum_probs=38.7
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C--CeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G--KETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~--g~~~~ad~VV~A~p~~ 193 (418)
...+.+.+.++++|+++++|+.|++|+. +++. +.. + ++++.+|.||++++..
T Consensus 201 ~~~~~l~~~l~~~GV~~~~~~~v~~v~~----~~~~-~~~~~g~~~~i~~d~vi~~~G~~ 255 (430)
T 3hyw_A 201 ASKRLVEDLFAERNIDWIANVAVKAIEP----DKVI-YEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp THHHHHHHHHHHTTCEEECSCEEEEECS----SEEE-EECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHHhCCeEEEeCceEEEEeC----CceE-EEeeCCCceEeecceEEEeccCC
Confidence 3556677788899999999999999863 3342 333 3 3479999999998754
No 199
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=83.38 E-value=0.91 Score=43.10 Aligned_cols=52 Identities=15% Similarity=0.108 Sum_probs=38.9
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
|.+.|.+.+. +++|+++++|++|..++ +.+ .|++ +|++++||.||.|.....
T Consensus 130 l~~~L~~~~~--~~~i~~~~~v~~i~~~~--~~v-~v~~~~g~~~~ad~vV~AdG~~S 182 (398)
T 2xdo_A 130 LRAILLNSLE--NDTVIWDRKLVMLEPGK--KKW-TLTFENKPSETADLVILANGGMS 182 (398)
T ss_dssp HHHHHHHTSC--TTSEEESCCEEEEEECS--SSE-EEEETTSCCEEESEEEECSCTTC
T ss_pred HHHHHHhhcC--CCEEEECCEEEEEEECC--CEE-EEEECCCcEEecCEEEECCCcch
Confidence 4455555443 36899999999999876 445 3666 567899999999999865
No 200
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=83.07 E-value=0.46 Score=45.25 Aligned_cols=44 Identities=20% Similarity=0.132 Sum_probs=35.0
Q ss_pred HHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccCh
Q 014807 146 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 192 (418)
Q Consensus 146 l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~ 192 (418)
+++.|++|++++.|..++.+++ + . .|.+ +|+++.+|.||+++|.
T Consensus 212 l~~~gi~v~~~~~v~~v~~~~~-~-~-~v~~~~g~~i~~D~vi~~~g~ 256 (401)
T 3vrd_B 212 TENALIEWHPGPDAAVVKTDTE-A-M-TVETSFGETFKAAVINLIPPQ 256 (401)
T ss_dssp STTCSEEEECTTTTCEEEEETT-T-T-EEEETTSCEEECSEEEECCCE
T ss_pred HHhcCcEEEeCceEEEEEeccc-c-e-EEEcCCCcEEEeeEEEEecCc
Confidence 4567899999999999988763 3 2 3555 6789999999998875
No 201
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=82.84 E-value=2.3 Score=40.49 Aligned_cols=60 Identities=15% Similarity=0.161 Sum_probs=43.7
Q ss_pred hhHHHHHHHHHh-cC-cEEEcCceeeEEEecCCCCeEEEEEE-C---C--eEEecCEEEEccChhh-HHHhhc
Q 014807 137 KIFEPWMDSMRT-RG-CEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 137 ~l~~~l~~~l~~-~G-~~I~l~t~V~~I~~~~~~g~v~~v~~-~---g--~~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
.|.+.|.+.+.+ .| ++|+++++|++|.. ++ + |+ |++ + | .++.||.||.|..... +.+.+.
T Consensus 108 ~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~-~-v~-v~~~~~~~g~~~~~~ad~vV~AdG~~S~vR~~l~ 176 (410)
T 3c96_A 108 ELQMILLAAVRERLGQQAVRTGLGVERIEE-RD-G-RV-LIGARDGHGKPQALGADVLVGADGIHSAVRAHLH 176 (410)
T ss_dssp HHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ET-T-EE-EEEEEETTSCEEEEEESEEEECCCTTCHHHHHHC
T ss_pred HHHHHHHHHHHhhCCCcEEEECCEEEEEec-CC-c-cE-EEEecCCCCCceEEecCEEEECCCccchhHHHhc
Confidence 366777777765 36 48999999999988 53 4 53 443 3 6 4789999999999866 455553
No 202
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=82.83 E-value=2.9 Score=37.81 Aligned_cols=48 Identities=19% Similarity=0.418 Sum_probs=34.7
Q ss_pred HHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE-C---Ce--EEecCEEEEccCh
Q 014807 142 WMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC-G---KE--TYSAGAVVLAVGI 192 (418)
Q Consensus 142 l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~---g~--~~~ad~VV~A~p~ 192 (418)
+.+.+.+ .|++|++++.|++|..++ + +..|++ + |+ ++.+|.||++++.
T Consensus 195 ~~~~~~~~~gv~~~~~~~v~~i~~~~--~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 249 (323)
T 3f8d_A 195 YVETVKKKPNVEFVLNSVVKEIKGDK--V-VKQVVVENLKTGEIKELNVNGVFIEIGF 249 (323)
T ss_dssp HHHHHHTCTTEEEECSEEEEEEEESS--S-EEEEEEEETTTCCEEEEECSEEEECCCE
T ss_pred HHHHHHhCCCcEEEeCCEEEEEeccC--c-eeEEEEEECCCCceEEEEcCEEEEEECC
Confidence 3444444 499999999999998654 3 445555 2 54 6899999999865
No 203
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=82.62 E-value=2.1 Score=38.69 Aligned_cols=54 Identities=20% Similarity=0.245 Sum_probs=39.3
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEE-EEECCeEEecCEEEEccCh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISD-VVCGKETYSAGAVVLAVGI 192 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~-v~~~g~~~~ad~VV~A~p~ 192 (418)
..+.+.+.+.+++.|.+++++ .|.+| .+++.+.+.. +..++ ++.+|+||+|+..
T Consensus 62 ~~~~~~~~~~~~~~~v~~~~~-~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 62 ISFMAPWSEQCMRFGLKHEMV-GVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHHHHHTTTCCEEECC-CEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCE
T ss_pred HHHHHHHHHHHHHcCcEEEEE-EEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCC
Confidence 347788888888889999999 88888 5541022321 33345 8999999999987
No 204
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=82.24 E-value=1.4 Score=39.94 Aligned_cols=41 Identities=27% Similarity=0.248 Sum_probs=31.8
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.+|.+||||-|||.+ +.+...+--|+.+|..||..|...+.
T Consensus 260 ~~Ts~p~IyA~GDv~--~~~~~~~~~A~~~G~~AA~~i~~~L~ 300 (304)
T 4fk1_A 260 GRTSEKNIYLAGETT--TQGPSSLIIAASQGNKAAIAINSDIT 300 (304)
T ss_dssp CBCSSTTEEECSHHH--HTSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeccC--CCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 457899999999985 33333466788999999999987764
No 205
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=82.17 E-value=1.8 Score=44.05 Aligned_cols=53 Identities=13% Similarity=0.159 Sum_probs=41.0
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccChhhHHHhhcc
Q 014807 149 RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVGISTLQELIKN 201 (418)
Q Consensus 149 ~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p~~~~~~Ll~~ 201 (418)
.|++|++++.|++|..+++++++++|++ +|+ ++.||.||+++......+++..
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL~~ 331 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLLVN 331 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHHHT
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHHHh
Confidence 3789999999999998753247778776 243 6789999999998777666543
No 206
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=82.10 E-value=3.8 Score=41.61 Aligned_cols=58 Identities=17% Similarity=0.094 Sum_probs=39.4
Q ss_pred CCCC-CCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCCCCccccccCCCCChhHHHH
Q 014807 332 MRGF-TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEEDEPHIEAL 396 (418)
Q Consensus 332 ~~~~-~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~~~~~~~~~~~~~~~~~~~~ 396 (418)
+..+ ..++||||||+- +++. +.|-|..+|..|+......+.. ....+.+ ++++-++++
T Consensus 377 ~tle~k~~~gLf~AGqi--nGtt--GYeEAaaqGl~AG~nAa~~~~~-~~~~~~~--r~~ayiG~l 435 (651)
T 3ces_A 377 PTLESKFIQGLFFAGQI--NGTT--GYEEAAAQGLLAGLNAARLSAD-KEGWAPA--RSQAYLGVL 435 (651)
T ss_dssp TTSBBSSSBTEEECSGG--GTCC--CHHHHHHHHHHHHHHHHHHHTT-CCCCCCC--TTTCHHHHH
T ss_pred ccccccCCCCeEEEEEe--cCCc--ChHHHHHHHHHHHHHHHHHhcC-CCCCCCC--hhhhhhhhH
Confidence 3444 357999999999 4443 5577889999988777665542 3444555 667767766
No 207
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=81.30 E-value=1.5 Score=38.20 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=30.5
Q ss_pred CCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHh
Q 014807 336 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
+.+||||.+||.. .. +....|+.+|+.+|+.|++++
T Consensus 196 t~~p~iya~G~~a--~~--g~~~~~~~~g~~~a~~i~~~l 231 (232)
T 2cul_A 196 KRLEGLYAVGLCV--RE--GDYARMSEEGKRLAEHLLHEL 231 (232)
T ss_dssp TTSBSEEECGGGT--SC--CCHHHHHHHHHHHHHHHHHHC
T ss_pred cccccceeeeecc--cC--ccHHHHHHHHHHHHHHHHhhc
Confidence 5789999999995 33 466788999999999999876
No 208
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=81.29 E-value=1.9 Score=38.60 Aligned_cols=53 Identities=23% Similarity=0.205 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHhc-CcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTR-GCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~-G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+.+. +.++. ++.|++|..++ +. +.|.+ +|+++.+|+||+|+...
T Consensus 57 ~~~~~~~~~~~~~~~v~~~-~~~v~~i~~~~--~~-~~v~~~~g~~~~~d~vviAtG~~ 111 (297)
T 3fbs_A 57 EIIAEARRQIERYPTIHWV-EGRVTDAKGSF--GE-FIVEIDGGRRETAGRLILAMGVT 111 (297)
T ss_dssp HHHHHHHHHHTTCTTEEEE-ESCEEEEEEET--TE-EEEEETTSCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHHhcCCeEEE-EeEEEEEEEcC--Ce-EEEEECCCCEEEcCEEEECCCCC
Confidence 4677777777776 45554 55999999876 43 34666 56789999999999974
No 209
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=81.13 E-value=3.1 Score=41.86 Aligned_cols=56 Identities=18% Similarity=0.204 Sum_probs=43.1
Q ss_pred HhcCcEEEcCceeeEEEecCC--CCeEEEEEE---CCe--EEecC-EEEEccChhhHHHhhccc
Q 014807 147 RTRGCEFLDGRRVTDFIYDEE--RCCISDVVC---GKE--TYSAG-AVVLAVGISTLQELIKNS 202 (418)
Q Consensus 147 ~~~G~~I~l~t~V~~I~~~~~--~g~v~~v~~---~g~--~~~ad-~VV~A~p~~~~~~Ll~~~ 202 (418)
.+.+.+|++++.|++|..+++ ++++++|+. +|+ ++.|+ -||+++.+-...+||--.
T Consensus 238 ~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~SPqLL~lS 301 (583)
T 3qvp_A 238 QRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAVSPTILEYS 301 (583)
T ss_dssp TCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTTHHHHHHHT
T ss_pred cCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccCCHHHHHHc
Confidence 356789999999999999831 178999986 344 56786 699999998888876543
No 210
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=80.88 E-value=2.9 Score=38.14 Aligned_cols=55 Identities=20% Similarity=0.137 Sum_probs=41.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEec--CCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYD--EERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~--~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+++.|++++. +.|.+|..+ ++ +.+..+..+|+++.+|+||+|+...
T Consensus 66 ~~~~~l~~~~~~~gv~~~~-~~v~~i~~~~~~~-~~~~v~~~~g~~~~~~~vv~AtG~~ 122 (325)
T 2q7v_A 66 ELAQRMHQQAEKFGAKVEM-DEVQGVQHDATSH-PYPFTVRGYNGEYRAKAVILATGAD 122 (325)
T ss_dssp HHHHHHHHHHHHTTCEEEE-CCEEEEEECTTSS-SCCEEEEESSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEe-eeEEEEEeccCCC-ceEEEEECCCCEEEeCEEEECcCCC
Confidence 4777788888888999987 689999886 42 2132233467889999999999974
No 211
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=80.78 E-value=1.8 Score=39.25 Aligned_cols=54 Identities=7% Similarity=0.126 Sum_probs=37.6
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+.+.+.++..++ |..+..+.+ + ...+..++.++.+|+||+|+...
T Consensus 67 ~l~~~~~~~~~~~~~~~~~~~-v~~~~~~~~-~-~~~~~~~~~~~~~~~liiATG~~ 120 (314)
T 4a5l_A 67 ELMMNMRTQSEKYGTTIITET-IDHVDFSTQ-P-FKLFTEEGKEVLTKSVIIATGAT 120 (314)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEECSSS-S-EEEEETTCCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhhcCcEEEEeE-EEEeecCCC-c-eEEEECCCeEEEEeEEEEccccc
Confidence 367777777888888887665 555555542 3 33334467799999999999964
No 212
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=79.62 E-value=2.5 Score=38.80 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEE-EE-CCeEEecCEEEEccChh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDV-VC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v-~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+.+.+.|+++++++ |.+|.. + +.+ .| .+ +|+++.+|+||+|+...
T Consensus 72 ~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~--~~~-~v~~~~~g~~~~~d~lviAtG~~ 125 (335)
T 2a87_A 72 ELMDEMREQALRFGADLRMED-VESVSL-H--GPL-KSVVTADGQTHRARAVILAMGAA 125 (335)
T ss_dssp HHHHHHHHHHHHTTCEEECCC-EEEEEC-S--SSS-EEEEETTSCEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHHHcCCEEEEee-EEEEEe-C--CcE-EEEEeCCCCEEEeCEEEECCCCC
Confidence 467777777888899999998 999887 3 333 34 55 56789999999999874
No 213
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=79.31 E-value=2.4 Score=39.74 Aligned_cols=45 Identities=24% Similarity=0.207 Sum_probs=35.2
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+.+++.|+++++++.|+.|..+. .. |..+|+++.+|++|+|+...
T Consensus 68 ~~~~~~~v~~~~g~~v~~id~~~--~~---V~~~g~~~~~d~lViATGs~ 112 (367)
T 1xhc_A 68 DWYRKRGIEIRLAEEAKLIDRGR--KV---VITEKGEVPYDTLVLATGAR 112 (367)
T ss_dssp HHHHHHTEEEECSCCEEEEETTT--TE---EEESSCEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEECCEEEEEECCC--CE---EEECCcEEECCEEEECCCCC
Confidence 34556799999999999998654 33 33677889999999999963
No 214
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=78.67 E-value=3.2 Score=41.02 Aligned_cols=49 Identities=10% Similarity=0.245 Sum_probs=36.2
Q ss_pred HHHHHHHh-cCcEEEcCceeeEEEecCCCCeEEEEEE----CCe--EEecCEEEEccC
Q 014807 141 PWMDSMRT-RGCEFLDGRRVTDFIYDEERCCISDVVC----GKE--TYSAGAVVLAVG 191 (418)
Q Consensus 141 ~l~~~l~~-~G~~I~l~t~V~~I~~~~~~g~v~~v~~----~g~--~~~ad~VV~A~p 191 (418)
.+.+.+.+ .|++|++++.|++|..++ +++.+|.+ +|+ ++.+|.||++++
T Consensus 395 ~l~~~l~~~~gV~v~~~~~v~~i~~~~--~~v~~v~~~~~~~g~~~~i~~D~vi~a~G 450 (521)
T 1hyu_A 395 VLQDKVRSLKNVDIILNAQTTEVKGDG--SKVVGLEYRDRVSGDIHSVALAGIFVQIG 450 (521)
T ss_dssp HHHHHHTTCTTEEEECSEEEEEEEECS--SSEEEEEEEETTTCCEEEEECSEEEECCC
T ss_pred HHHHHHhcCCCcEEEeCCEEEEEEcCC--CcEEEEEEEeCCCCceEEEEcCEEEECcC
Confidence 45566666 589999999999998765 55656655 243 578999998875
No 215
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=78.55 E-value=2.6 Score=41.87 Aligned_cols=56 Identities=14% Similarity=0.166 Sum_probs=42.3
Q ss_pred HHhcCcEEEcCceeeEEEecCC-CCeEEEEEE---CCe--EE---ecCEEEEccChhhHHHhhcc
Q 014807 146 MRTRGCEFLDGRRVTDFIYDEE-RCCISDVVC---GKE--TY---SAGAVVLAVGISTLQELIKN 201 (418)
Q Consensus 146 l~~~G~~I~l~t~V~~I~~~~~-~g~v~~v~~---~g~--~~---~ad~VV~A~p~~~~~~Ll~~ 201 (418)
+++.|++|++++.|++|..+++ ++++++|.+ +|+ ++ .++.||+|+.+....+|+-.
T Consensus 204 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~GV~~~~~~g~~~~~~v~a~k~VILaaGa~~sp~lL~~ 268 (536)
T 1ju2_A 204 GNSNNLRVGVHASVEKIIFSNAPGLTATGVIYRDSNGTPHQAFVRSKGEVIVSAGTIGTPQLLLL 268 (536)
T ss_dssp SCTTTEEEEESCEEEEEEECCSSSCBEEEEEEECTTSCEEEEEEEEEEEEEECCHHHHHHHHHHH
T ss_pred hcCCCcEEEeCCEEEEEEECCCCCCEEEEEEEEeCCCceEEEEeccCCEEEEcCcccCCHHHHHH
Confidence 4567899999999999998762 137888876 354 34 56899999999877777543
No 216
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=77.97 E-value=3.7 Score=39.93 Aligned_cols=43 Identities=14% Similarity=0.141 Sum_probs=30.4
Q ss_pred cCcEEEcCceeeEEEecCCCC-eEEEEEEC----------------C--eEEecCEEEEccCh
Q 014807 149 RGCEFLDGRRVTDFIYDEERC-CISDVVCG----------------K--ETYSAGAVVLAVGI 192 (418)
Q Consensus 149 ~G~~I~l~t~V~~I~~~~~~g-~v~~v~~~----------------g--~~~~ad~VV~A~p~ 192 (418)
.|++|++++.+.+|..+++ + ++.+|++. | +++.+|.||+++..
T Consensus 270 ~gv~~~~~~~~~~i~~~~~-~~~v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~ 331 (460)
T 1cjc_A 270 RAWGLRFFRSPQQVLPSPD-GRRAAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGY 331 (460)
T ss_dssp EEEEEECSEEEEEEEECTT-SSSEEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCE
T ss_pred ceEEEECCCChheEEcCCC-CceEEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCC
Confidence 7899999999999986542 4 56555442 3 35778888877754
No 217
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=77.89 E-value=6.3 Score=39.87 Aligned_cols=53 Identities=19% Similarity=0.152 Sum_probs=34.4
Q ss_pred CCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCCCCccccccCCCCChhHHHH
Q 014807 337 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEEDEPHIEAL 396 (418)
Q Consensus 337 ~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~~~~~~~~~~~~~~~~~~~~ 396 (418)
.++||||||+- +++ .+.|-|..+|..|+-.....+.. ....+.+ .+++=++++
T Consensus 388 ~~~gLf~AGqi--nGt--~GyeEAaaqGl~AG~nAa~~~~~-~~~~~~~--r~~ayig~l 440 (637)
T 2zxi_A 388 KIRGLFHAGNF--NGT--TGYEEAAGQGIVAGINAALRAFG-KEPIYLR--RDESYIGVM 440 (637)
T ss_dssp SSBTEEECGGG--GTB--CSHHHHHHHHHHHHHHHHHHHTT-CCCCCCC--TTTCHHHHH
T ss_pred CCCCEEEeeec--CCc--chHHHHHHHHHHHHHHHHHHhcC-CCCCCCC--hhheehhhH
Confidence 47999999999 444 24566778888888766555542 3334555 555545554
No 218
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=77.75 E-value=5.7 Score=40.62 Aligned_cols=51 Identities=16% Similarity=0.227 Sum_probs=38.6
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECC--eEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g--~~~~ad~VV~A~p~~ 193 (418)
....+.+.+++.|++|++++.|++|. ++ + +. +..+| +++.+|.||++++..
T Consensus 575 ~~~~~~~~l~~~GV~v~~~~~v~~i~--~~-~-v~-~~~~G~~~~i~~D~Vi~a~G~~ 627 (671)
T 1ps9_A 575 TGWIHRTTLLSRGVKMIPGVSYQKID--DD-G-LH-VVINGETQVLAVDNVVICAGQE 627 (671)
T ss_dssp THHHHHHHHHHTTCEEECSCEEEEEE--TT-E-EE-EEETTEEEEECCSEEEECCCEE
T ss_pred cHHHHHHHHHhcCCEEEeCcEEEEEe--CC-e-EE-EecCCeEEEEeCCEEEECCCcc
Confidence 34456677888999999999999987 22 3 42 33566 578999999999864
No 219
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=77.65 E-value=2.8 Score=42.07 Aligned_cols=54 Identities=15% Similarity=0.195 Sum_probs=41.4
Q ss_pred hcCcEEEcCceeeEEEecCCCCeEEEEEE--C-Ce--EEec-CEEEEccChhhHHHhhcc
Q 014807 148 TRGCEFLDGRRVTDFIYDEERCCISDVVC--G-KE--TYSA-GAVVLAVGISTLQELIKN 201 (418)
Q Consensus 148 ~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~-g~--~~~a-d~VV~A~p~~~~~~Ll~~ 201 (418)
+.+.+|++++.|++|..+++++++++|.. . |+ ++.| +.||+++.+-...+||--
T Consensus 218 r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~sp~lL~~ 277 (577)
T 3q9t_A 218 KPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFETPKLLML 277 (577)
T ss_dssp CTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCChHHHHH
Confidence 45789999999999999832278889887 2 54 4667 569999999887776543
No 220
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=77.27 E-value=5.7 Score=39.14 Aligned_cols=59 Identities=19% Similarity=0.191 Sum_probs=41.5
Q ss_pred cchhhHHHHHHHHHhcCcEEEcCceeeEEEecCC--CCeEEEEEE---CC-e--EEecCEEEEccChh
Q 014807 134 LREKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEE--RCCISDVVC---GK-E--TYSAGAVVLAVGIS 193 (418)
Q Consensus 134 ~~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~--~g~v~~v~~---~g-~--~~~ad~VV~A~p~~ 193 (418)
+...+.+.+.+.+++.|++|++++.|++|...++ .+.+. +.. +| + ++.+|.||+|++..
T Consensus 248 ~d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~-v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 248 FDQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLR-VVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp SCHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEE-EEEEESSSSCEEEEEESEEEECSCEE
T ss_pred CCHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEE-EEEEECCCcEEEEEECCEEEEecCCc
Confidence 3345778888889999999999999888875431 02232 322 44 2 56899999999864
No 221
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=76.93 E-value=3.8 Score=36.48 Aligned_cols=40 Identities=20% Similarity=0.086 Sum_probs=33.1
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.++..+|||.+||.. +.+ .....|+..|..||..|...+.
T Consensus 253 ~~t~~~~vya~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~l~ 292 (297)
T 3fbs_A 253 KQTTARGIFACGDVA--RPA-GSVALAVGDGAMAGAAAHRSIL 292 (297)
T ss_dssp CBCSSTTEEECSGGG--CTT-CCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEeecC--Cch-HHHHHHHHhHHHHHHHHHHHHh
Confidence 357789999999994 333 4778899999999999998875
No 222
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=75.84 E-value=4.1 Score=36.79 Aligned_cols=54 Identities=17% Similarity=0.158 Sum_probs=36.2
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+.+...+.+.+.+.....+..|..+...++ +..+ |.+ +|+++.+|+||+||...
T Consensus 62 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-v~~~~g~~~~a~~liiATGs~ 116 (304)
T 4fk1_A 62 FKEIGLNEVMKYPSVHYYEKTVVMITKQST-GLFE-IVTKDHTKYLAERVLLATGMQ 116 (304)
T ss_dssp HHHHHHHHHTTSTTEEEEECCEEEEEECTT-SCEE-EEETTCCEEEEEEEEECCCCE
T ss_pred HHHHHHHHHHhcCCEEEEeeEEEEeeecCC-CcEE-EEECCCCEEEeCEEEEccCCc
Confidence 555555566666665556666666665553 5443 444 67899999999999864
No 223
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=75.43 E-value=3.4 Score=39.71 Aligned_cols=45 Identities=24% Similarity=0.303 Sum_probs=35.8
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+.+++.|+++++++.|+.|..++ .. |.+ +|+++.+|.||+|+...
T Consensus 68 ~~~~~~gv~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 113 (431)
T 1q1r_A 68 DAYAAQNIQLLGGTQVTAINRDR--QQ---VILSDGRALDYDRLVLATGGR 113 (431)
T ss_dssp HHHHHTTEEEECSCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEcCCCC
Confidence 44567899999999999998755 43 445 57789999999999874
No 224
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=75.31 E-value=3.3 Score=37.93 Aligned_cols=41 Identities=22% Similarity=0.303 Sum_probs=32.5
Q ss_pred CCCCCCCEEEec--cccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAG--DWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laG--d~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
..+..+|||.+| |.+ ..+..++..|+..|..||+.|.+.+.
T Consensus 310 ~~t~~~~vya~Gd~d~~--~~~~~~~~~A~~~g~~~a~~i~~~l~ 352 (357)
T 4a9w_A 310 RALAVPSVWLLGYGDWN--GMASATLIGVTRYAREAVRQVTAYCA 352 (357)
T ss_dssp BBSSCTTEEECSSCGGG--STTCSSTTTHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCCeEEecccccc--ccchhhhhhhHHHHHHHHHHHHHHHH
Confidence 356789999999 553 32225678899999999999999986
No 225
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=75.18 E-value=5.7 Score=39.48 Aligned_cols=57 Identities=12% Similarity=0.144 Sum_probs=41.8
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-C---C--eEEecCEEEEccChhh-HHHhhc
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-G---K--ETYSAGAVVLAVGIST-LQELIK 200 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~---g--~~~~ad~VV~A~p~~~-~~~Ll~ 200 (418)
+-+.|.+.+++. |+++++|++|..++ +.|+ |++ + | .++.||.||.|..... +.+.+.
T Consensus 140 l~~~L~~~a~~~---v~~~~~v~~~~~~~--~~v~-v~~~~~~~G~~~~i~a~~vVgADG~~S~vR~~lg 203 (549)
T 2r0c_A 140 LAPLLAEAVGER---LRTRSRLDSFEQRD--DHVR-ATITDLRTGATRAVHARYLVACDGASSPTRKALG 203 (549)
T ss_dssp HHHHHHHHHGGG---EECSEEEEEEEECS--SCEE-EEEEETTTCCEEEEEEEEEEECCCTTCHHHHHHT
T ss_pred HHHHHHHHHHHh---cccCcEEEEEEEeC--CEEE-EEEEECCCCCEEEEEeCEEEECCCCCcHHHHHcC
Confidence 556677777665 99999999999877 3454 433 3 5 4789999999999876 455554
No 226
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=74.89 E-value=4.6 Score=33.11 Aligned_cols=40 Identities=25% Similarity=0.120 Sum_probs=31.1
Q ss_pred CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 335 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 335 ~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
++..+++|.+||... .+......|+..|..||..|...+.
T Consensus 132 ~t~~~~i~a~GD~~~--~~~~~~~~A~~~g~~aa~~i~~~~~ 171 (180)
T 2ywl_A 132 RTSYPRVYAAGVARG--KVPGHAIISAGDGAYVAVHLVSDLR 171 (180)
T ss_dssp BCSSTTEEECGGGGT--CCSCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCEEEeecccC--cchhhHHHHHHhHHHHHHHHHHHhh
Confidence 466799999999953 3212567799999999999988764
No 227
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=74.84 E-value=2.3 Score=42.60 Aligned_cols=56 Identities=21% Similarity=0.135 Sum_probs=42.0
Q ss_pred HhcCcEEEcCceeeEEEec---CCCCeEEEEEE---CC-e--EEec-CEEEEccChhhHHHhhccc
Q 014807 147 RTRGCEFLDGRRVTDFIYD---EERCCISDVVC---GK-E--TYSA-GAVVLAVGISTLQELIKNS 202 (418)
Q Consensus 147 ~~~G~~I~l~t~V~~I~~~---~~~g~v~~v~~---~g-~--~~~a-d~VV~A~p~~~~~~Ll~~~ 202 (418)
.+.+.+|++++.|++|..+ ++++++++|.. +| + ++.| +-||+++.+-...+||--.
T Consensus 219 ~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~SPqlL~lS 284 (566)
T 3fim_B 219 SRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVGTPILLQLS 284 (566)
T ss_dssp TCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHHHHHHHHHT
T ss_pred cCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcCChHHHHhc
Confidence 4567899999999999987 21146788876 24 3 5677 6799999998888776443
No 228
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=74.20 E-value=3.7 Score=41.32 Aligned_cols=55 Identities=18% Similarity=0.193 Sum_probs=41.7
Q ss_pred HhcCcEEEcCceeeEEEecCCC--CeEEEEEE---CCe--EEec-CEEEEccChhhHHHhhcc
Q 014807 147 RTRGCEFLDGRRVTDFIYDEER--CCISDVVC---GKE--TYSA-GAVVLAVGISTLQELIKN 201 (418)
Q Consensus 147 ~~~G~~I~l~t~V~~I~~~~~~--g~v~~v~~---~g~--~~~a-d~VV~A~p~~~~~~Ll~~ 201 (418)
.+.+.+|++++.|++|..++++ +++++|.. +|+ ++.| +.||+|+..-...+||-.
T Consensus 242 ~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~sp~lL~~ 304 (587)
T 1gpe_A 242 QRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAISPLILEY 304 (587)
T ss_dssp TCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTHHHHHHH
T ss_pred cCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCCHHHHHh
Confidence 3567899999999999987421 36888765 454 5678 899999999777766543
No 229
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=72.73 E-value=4.2 Score=37.28 Aligned_cols=40 Identities=28% Similarity=0.336 Sum_probs=31.5
Q ss_pred CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 335 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 335 ~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
++..+|||.+||.. +.+......|+..|..||..|...+.
T Consensus 277 ~t~~~~iya~GD~~--~~~~~~~~~A~~~g~~aA~~i~~~l~ 316 (335)
T 2a87_A 277 STSLPGVFAAGDLV--DRTYRQAVTAAGSGCAAAIDAERWLA 316 (335)
T ss_dssp BCSSTTEEECGGGT--CCSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCEEEeeecC--CccHHHHHHHHHhHHHHHHHHHHHhh
Confidence 46789999999995 33223567899999999999988764
No 230
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=72.71 E-value=4.7 Score=43.23 Aligned_cols=49 Identities=22% Similarity=0.331 Sum_probs=37.2
Q ss_pred HHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC--------C--eEEecCEEEEccCh
Q 014807 143 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--------K--ETYSAGAVVLAVGI 192 (418)
Q Consensus 143 ~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~--------g--~~~~ad~VV~A~p~ 192 (418)
.+.+++.|++|++++.|++|..+++ +++.+|++. | +++.+|.||++++.
T Consensus 323 ~~~l~~~GV~v~~~~~v~~i~~~~~-~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~ 381 (965)
T 2gag_A 323 AAQAVADGVQVISGSVVVDTEADEN-GELSAIVVAELDEARELGGTQRFEADVLAVAGGF 381 (965)
T ss_dssp HHHHHHTTCCEEETEEEEEEEECTT-SCEEEEEEEEECTTCCEEEEEEEECSEEEEECCE
T ss_pred HHHHHhCCeEEEeCCEeEEEeccCC-CCEEEEEEEeccccCCCCceEEEEcCEEEECCCc
Confidence 5667889999999999999987411 445555542 4 57899999999974
No 231
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=72.57 E-value=3.6 Score=39.13 Aligned_cols=44 Identities=25% Similarity=0.254 Sum_probs=35.1
Q ss_pred HHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 145 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 145 ~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.|++++++++|+.|..+. .. |.+ +|+++.+|++|+|+...
T Consensus 66 ~~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 66 WYGEARIDMLTGPEVTALDVQT--RT---ISLDDGTTLSADAIVIATGSR 110 (410)
T ss_dssp HHHHTTCEEEESCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHHHCCCEEEeCCEEEEEECCC--CE---EEECCCCEEECCEEEEccCCc
Confidence 3456799999999999998765 42 444 57789999999999864
No 232
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=71.80 E-value=6.2 Score=37.03 Aligned_cols=45 Identities=22% Similarity=0.166 Sum_probs=35.7
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIS 193 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~ 193 (418)
+.+++.|+++++++.|+.|..++ .. |.++++++.+|++|+|+...
T Consensus 68 ~~~~~~~v~~~~~~~v~~i~~~~--~~---v~~~~~~~~~d~lviAtG~~ 112 (384)
T 2v3a_A 68 AMAEQLNARILTHTRVTGIDPGH--QR---IWIGEEEVRYRDLVLAWGAE 112 (384)
T ss_dssp HHHHHTTCEEECSCCCCEEEGGG--TE---EEETTEEEECSEEEECCCEE
T ss_pred HHHHhCCcEEEeCCEEEEEECCC--CE---EEECCcEEECCEEEEeCCCC
Confidence 33466789999999999998755 43 45677789999999999874
No 233
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=71.80 E-value=5.3 Score=39.26 Aligned_cols=51 Identities=18% Similarity=0.247 Sum_probs=41.4
Q ss_pred cCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccChhhHHHhhcc
Q 014807 149 RGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGISTLQELIKN 201 (418)
Q Consensus 149 ~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~~~~~~Ll~~ 201 (418)
.+.+|.+++.|++|..++ +++++|.. .++ ++.|+.||++..+-.+.+||-.
T Consensus 224 ~nl~v~~~~~v~~i~~~~--~~a~gv~~~~~~~~~~~~a~~VILsAGai~SP~LLl~ 278 (526)
T 3t37_A 224 KNLTILTGSRVRRLKLEG--NQVRSLEVVGRQGSAEVFADQIVLCAGALESPALLMR 278 (526)
T ss_dssp TTEEEECSCEEEEEEEET--TEEEEEEEEETTEEEEEEEEEEEECSHHHHHHHHHHH
T ss_pred CCeEEEeCCEEEEEEecC--CeEEEEEEEecCceEEEeecceEEcccccCCcchhhh
Confidence 467999999999999987 77888776 333 5788999999999888887644
No 234
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=71.37 E-value=6 Score=38.30 Aligned_cols=53 Identities=17% Similarity=0.173 Sum_probs=37.7
Q ss_pred hhhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CCe--EEecCEEEEccChh
Q 014807 136 EKIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GKE--TYSAGAVVLAVGIS 193 (418)
Q Consensus 136 ~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g~--~~~ad~VV~A~p~~ 193 (418)
..+.+.+.+.++ ++|+++++|++|..+++ +++. |.+ +|+ ++.+|.||+|++..
T Consensus 214 ~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~-~~v~-v~~~~~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 214 QDIVNTLLSILK---LNIKFNSPVTEVKKIKD-DEYE-VIYSTKDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHHHHHHHHC---CCEECSCCEEEEEEEET-TEEE-EEECCTTSCCEEEEESCEEECCCEE
T ss_pred HHHHHHHHhcCE---EEEEECCEEEEEEEcCC-CcEE-EEEEecCCceEEEEcCEEEECcCCC
Confidence 345555555543 89999999999987652 3343 555 354 78999999999864
No 235
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=69.00 E-value=3.7 Score=42.50 Aligned_cols=49 Identities=12% Similarity=0.079 Sum_probs=35.2
Q ss_pred HHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE---CC-eE------------------EecCEEEEccChh
Q 014807 140 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC---GK-ET------------------YSAGAVVLAVGIS 193 (418)
Q Consensus 140 ~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~---~g-~~------------------~~ad~VV~A~p~~ 193 (418)
..+.+.+++.|++|++++.|++|..+ + +. +.. ++ ++ +.+|.||+|++..
T Consensus 575 ~~~~~~l~~~GV~i~~~~~v~~i~~~---~-v~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~a~G~~ 645 (729)
T 1o94_A 575 PNMMRRLHELHVEELGDHFCSRIEPG---R-ME-IYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVLVTGRH 645 (729)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEETT---E-EE-EEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEEESCEE
T ss_pred HHHHHHHHhCCCEEEcCcEEEEEECC---e-EE-EEEecCCceEEecccccccccccCCcceeeeCCEEEECCCCC
Confidence 45667788899999999999999732 2 32 322 22 22 8999999999853
No 236
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=68.88 E-value=4.3 Score=38.95 Aligned_cols=43 Identities=16% Similarity=0.186 Sum_probs=33.3
Q ss_pred HHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 145 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 145 ~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+++.|++++.+ .|++|+.++ .+ |++ +|+++.+|++|+|+.+.
T Consensus 65 ~~~~~gv~~i~~-~v~~Id~~~--~~---V~~~~g~~i~YD~LViAtG~~ 108 (430)
T 3hyw_A 65 LLPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TGGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHHCCcEEEEe-EEEEEECCC--CE---EEECCCCEEECCEEEEeCCCC
Confidence 345678998877 699998765 43 455 67899999999999975
No 237
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=68.63 E-value=5.6 Score=38.53 Aligned_cols=40 Identities=23% Similarity=0.282 Sum_probs=32.9
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.+|..+|||.+||.+ .+ + ..+..|+..|+.||+.|...+.
T Consensus 405 ~~Ts~~~VfA~GD~~-~g-~-~~v~~A~~~G~~aA~~i~~~L~ 444 (456)
T 2vdc_G 405 KMTNMDGVFAAGDIV-RG-A-SLVVWAIRDGRDAAEGIHAYAK 444 (456)
T ss_dssp CBCSSTTEEECGGGG-SS-C-CSHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEecccc-CC-c-hHHHHHHHHHHHHHHHHHHHhh
Confidence 447789999999995 22 3 4678899999999999998874
No 238
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=67.84 E-value=13 Score=40.15 Aligned_cols=48 Identities=23% Similarity=0.237 Sum_probs=36.6
Q ss_pred HHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--------------CC--eEEecCEEEEccCh
Q 014807 143 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--------------GK--ETYSAGAVVLAVGI 192 (418)
Q Consensus 143 ~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--------------~g--~~~~ad~VV~A~p~ 192 (418)
.+.+++.|++|++++.|.+|..++ ++|++|++ +| .++.+|.||+|+..
T Consensus 377 ~~~~~~~Gv~~~~~~~~~~i~~~~--g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~ 440 (1025)
T 1gte_A 377 VELAKEEKCEFLPFLSPRKVIVKG--GRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGS 440 (1025)
T ss_dssp HHHHHHTTCEEECSEEEEEEEEET--TEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHcCCEEEeCCCceEEEccC--CeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCC
Confidence 356677899999999999998654 66665543 12 36899999999975
No 239
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=66.07 E-value=15 Score=36.75 Aligned_cols=59 Identities=17% Similarity=0.170 Sum_probs=40.9
Q ss_pred chhhHHHHHHHHHhcCcEEEcCceeeEEEec------C-CCCeEEEEE--E-CCeEEe--cCEEEEccChhh
Q 014807 135 REKIFEPWMDSMRTRGCEFLDGRRVTDFIYD------E-ERCCISDVV--C-GKETYS--AGAVVLAVGIST 194 (418)
Q Consensus 135 ~~~l~~~l~~~l~~~G~~I~l~t~V~~I~~~------~-~~g~v~~v~--~-~g~~~~--ad~VV~A~p~~~ 194 (418)
...+.+.+.+.+++.|++|++++.|++|... + +.+++. +. . +|+++. +|.||+|++...
T Consensus 325 d~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~-v~~~~~~g~~~~~~~D~vi~a~G~~p 395 (598)
T 2x8g_A 325 DQQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLL-VKGHYTDGKKFEEEFETVIFAVGREP 395 (598)
T ss_dssp CHHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEE-EEEEETTSCEEEEEESEEEECSCEEE
T ss_pred CHHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEE-EEEEeCCCcEEeccCCEEEEEeCCcc
Confidence 3457777888888999999999988888532 1 113332 32 2 565554 999999998643
No 240
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=65.21 E-value=7.5 Score=37.07 Aligned_cols=36 Identities=19% Similarity=0.021 Sum_probs=27.0
Q ss_pred CCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 337 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 337 ~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.++||||||+- +|. .+.+-|..+|..|+..+...+.
T Consensus 327 ~~~~Lf~AGqi--~G~--~Gy~eAaa~Gl~AG~naa~~~~ 362 (443)
T 3g5s_A 327 EAEGLYAAGVL--AGV--EGYLESAATGFLAGLNAARKAL 362 (443)
T ss_dssp TEEEEEECGGG--GTB--CSHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEECccc--ccc--HHHHHHHHhHHHHHHHHHHHhc
Confidence 57999999999 444 3556778889888876665554
No 241
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=64.63 E-value=4.8 Score=38.24 Aligned_cols=42 Identities=29% Similarity=0.341 Sum_probs=33.6
Q ss_pred HhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 147 RTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 147 ~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
++.|++++++++|+.|..++ .+ |.+ +|+++.+|++|+|+...
T Consensus 70 ~~~~v~~~~~~~v~~i~~~~--~~---v~~~~g~~~~~d~lviAtG~~ 112 (408)
T 2gqw_A 70 RAPEVEWLLGVTAQSFDPQA--HT---VALSDGRTLPYGTLVLATGAA 112 (408)
T ss_dssp TSCSCEEEETCCEEEEETTT--TE---EEETTSCEEECSEEEECCCEE
T ss_pred HHCCCEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 45689999999999998754 43 445 57789999999999873
No 242
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=64.60 E-value=6.6 Score=37.31 Aligned_cols=46 Identities=15% Similarity=0.072 Sum_probs=36.4
Q ss_pred HHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccCh
Q 014807 142 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 192 (418)
Q Consensus 142 l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~ 192 (418)
..+.+.+.|+++++++.|++|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 71 ~~~~~~~~~i~~~~~~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 71 PAQFWEDKAVEMKLGAEVVSLDPAA--HT---VKLGDGSAIEYGKLIWATGG 117 (415)
T ss_dssp CHHHHHHTTEEEEETCCEEEEETTT--TE---EEETTSCEEEEEEEEECCCE
T ss_pred CHHHHHHCCcEEEeCCEEEEEECCC--CE---EEECCCCEEEeeEEEEccCC
Confidence 3455667899999999999998755 42 445 5778999999999985
No 243
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=63.91 E-value=11 Score=35.54 Aligned_cols=40 Identities=23% Similarity=0.227 Sum_probs=31.9
Q ss_pred CCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 337 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 337 ~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
..+|+|.+||.+....+ .....|...|..||+.|...++.
T Consensus 298 ~~~~vfa~GD~~~~~~~-~~~~~A~~q~~~aa~~i~~~l~~ 337 (409)
T 3h8l_A 298 KYDNVYAVGDANSMTVP-KLGYLAVMTGRIAAQHLANRLGV 337 (409)
T ss_dssp SCTTEEECGGGBTTCCS-CCHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEeehhccCCCC-cHHHHHHHHHHHHHHHHHHHhcC
Confidence 68999999999532223 46678999999999999999854
No 244
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=63.29 E-value=13 Score=37.15 Aligned_cols=50 Identities=12% Similarity=0.062 Sum_probs=37.5
Q ss_pred HHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccCh
Q 014807 140 EPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 140 ~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~ 192 (418)
+.+....++.|.++++++.|++|..++ +.+. +.. +|+ ++.+|++|+|+..
T Consensus 97 ~~~~~~~~~~gi~v~~~~~V~~id~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~ 150 (588)
T 3ics_A 97 QTVERMSKRFNLDIRVLSEVVKINKEE--KTIT-IKNVTTNETYNEAYDVLILSPGA 150 (588)
T ss_dssp SCHHHHHHHTTCEEECSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred cCHHHHHHhcCcEEEECCEEEEEECCC--CEEE-EeecCCCCEEEEeCCEEEECCCC
Confidence 344455567799999999999999876 5443 443 455 6899999999986
No 245
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=62.87 E-value=5.2 Score=38.02 Aligned_cols=36 Identities=11% Similarity=0.266 Sum_probs=27.2
Q ss_pred CCCCCEEEecccccc---CCCccchHHHHHHHHHHHHHHH
Q 014807 336 TSFPNLFMAGDWITT---RHGSWSQERSYVTGLEAANRVV 372 (418)
Q Consensus 336 ~~~~~l~laGd~~~~---~~g~~~~egAi~SG~~aA~~Il 372 (418)
+.+|||||||+-+.. ..|+ .+..|..||+.|++.+.
T Consensus 361 ~~~~gly~~GE~ldv~g~~GGy-nlq~a~~sg~~ag~~~~ 399 (401)
T 2gqf_A 361 NQVSGLYFIGEVLDVTGWLGGY-NFQWAWSSAYACALSIS 399 (401)
T ss_dssp SSSTTEEECGGGBSCEECTTTH-HHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEEEEeEEeccCCCCH-HHHHHHHHHHHHHHHHh
Confidence 468999999997642 1122 46889999999998774
No 246
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=62.63 E-value=6.6 Score=37.82 Aligned_cols=46 Identities=22% Similarity=0.296 Sum_probs=35.6
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCeEEecCEEEEccCh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKETYSAGAVVLAVGI 192 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~~~~ad~VV~A~p~ 192 (418)
+.+.+.|.++++++.|++|..++ +.+ .+.. +++++.+|++|+|+..
T Consensus 66 ~~~~~~gi~~~~~~~V~~id~~~--~~v-~v~~~~~~~~~~~d~lviAtG~ 113 (452)
T 3oc4_A 66 EELRRQKIQLLLNREVVAMDVEN--QLI-AWTRKEEQQWYSYDKLILATGA 113 (452)
T ss_dssp HHHHHTTEEEECSCEEEEEETTT--TEE-EEEETTEEEEEECSEEEECCCC
T ss_pred HHHHHCCCEEEECCEEEEEECCC--CEE-EEEecCceEEEEcCEEEECCCc
Confidence 44567899999999999998876 544 2432 3567999999999987
No 247
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=62.56 E-value=8.2 Score=39.10 Aligned_cols=53 Identities=25% Similarity=0.228 Sum_probs=35.3
Q ss_pred CCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCCCCccccccCCCCChhHHHH
Q 014807 337 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGDGSFSKIIPVEEDEPHIEAL 396 (418)
Q Consensus 337 ~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~~~~~~~~~~~~~~~~~~~~ 396 (418)
.++||||||+-. +. .+.+-|..+|..|+..+...+.. ....+.+ .+++=++++
T Consensus 377 ~~~gLf~AGqi~--g~--~Gy~eA~a~G~~AG~naa~~~~~-~~~~~~~--r~~~y~g~l 429 (641)
T 3cp8_A 377 PVENLFFAGQIN--GT--SGYEEAAAQGLMAGINAVRKILG-KELIVLG--RDQAYIGVL 429 (641)
T ss_dssp SSBTEEECSGGG--TB--CCHHHHHHHHHHHHHHHHHHHHT-CCCCCCC--TTTCHHHHH
T ss_pred CcCCEEEEEeec--CC--ccHHHHHHHHHHHHHHHHHHhcC-CCCCCCC--hhhhHHHHH
Confidence 589999999994 33 35578889999999877666532 3333444 455545544
No 248
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=62.46 E-value=12 Score=36.77 Aligned_cols=56 Identities=14% Similarity=0.019 Sum_probs=40.4
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCC-----eEEEEEE-C---C--eEEecCEEEEccCh
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERC-----CISDVVC-G---K--ETYSAGAVVLAVGI 192 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g-----~v~~v~~-~---g--~~~~ad~VV~A~p~ 192 (418)
.+.+.|....++.+..|++|+.|++|...++++ ..+.|++ + | +++.|+.||+|++.
T Consensus 146 E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 146 EFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp HHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred HHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 377777776777777899999999998754311 1355655 2 2 36899999999984
No 249
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=62.25 E-value=7.2 Score=37.52 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=30.3
Q ss_pred CCCCCEEEeccccccCCCc---cchHHHHHHHHHHHHHHHHHhC
Q 014807 336 TSFPNLFMAGDWITTRHGS---WSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~---~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.++||||+||+-+. -+|. -++..|+.+|+.|++.+.+...
T Consensus 402 ~~i~GLy~aGEv~~-v~g~~GG~~l~~a~~~G~~Ag~~aa~~~~ 444 (447)
T 2i0z_A 402 KFTNGLYFCGEVLD-IHGYTGGYNITSALVTGRIAGTTAGENAK 444 (447)
T ss_dssp SSSBTEEECGGGBS-CBCCTTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCEEEEEeecc-CccCCCcHHHHHHHHHHHHHHHHHHHhhh
Confidence 47899999998864 2222 2468899999999999876643
No 250
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=61.96 E-value=4.8 Score=39.06 Aligned_cols=48 Identities=21% Similarity=0.256 Sum_probs=34.0
Q ss_pred HHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-------------------CC--eEEecCEEEEccChh
Q 014807 143 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-------------------GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 143 ~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-------------------~g--~~~~ad~VV~A~p~~ 193 (418)
.+.+++.|+++++++.|.+|.. + |++.+|++ +| .++.+|.||+|++..
T Consensus 309 ~~~~~~~Gv~~~~~~~~~~i~~-~--g~v~~v~~~~~~~~~~d~~G~~~~~~~~g~~~~i~aD~Vi~A~G~~ 377 (456)
T 2vdc_G 309 VAHAEEEGVEFIWQAAPEGFTG-D--TVVTGVRAVRIHLGVADATGRQTPQVIEGSEFTVQADLVIKALGFE 377 (456)
T ss_dssp HHHHHHTTCEEECCSSSCCEEE-E--EEEETTEEEEEEEEEEEECTTCCEEEEEEEEEEEECSEEEECSCEE
T ss_pred HHHHHHCCCEEEeCCCceEEeC-C--CcEEEEEEEEEEecccCCcCCccccccCCcEEEEECCEEEECCCCC
Confidence 3456778999999999999974 2 44432221 23 368999999999863
No 251
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=61.47 E-value=7.3 Score=38.01 Aligned_cols=47 Identities=13% Similarity=0.258 Sum_probs=35.1
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC--CeEEecCEEEEccChh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG--KETYSAGAVVLAVGIS 193 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~--g~~~~ad~VV~A~p~~ 193 (418)
+.+++.|++++++++|..|..++ +.+ .+..+ ++++.+|++|+|+...
T Consensus 100 ~~~~~~gv~v~~~~~v~~i~~~~--~~v-~v~~~g~~~~~~~d~lviAtG~~ 148 (490)
T 2bc0_A 100 EELESLGAKVYMESPVQSIDYDA--KTV-TALVDGKNHVETYDKLIFATGSQ 148 (490)
T ss_dssp HHHHHTTCEEETTCCEEEEETTT--TEE-EEEETTEEEEEECSEEEECCCEE
T ss_pred HHHHhCCCEEEeCCEEEEEECCC--CEE-EEEeCCcEEEEECCEEEECCCCC
Confidence 34556799999999999998765 544 24323 3479999999999964
No 252
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=61.37 E-value=14 Score=35.55 Aligned_cols=47 Identities=15% Similarity=0.176 Sum_probs=35.4
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--C--CeEEecCEEEEccChh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--G--KETYSAGAVVLAVGIS 193 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~--g~~~~ad~VV~A~p~~ 193 (418)
+.+++.|+++++++.|..|..++ +.+. +.. + ++++.+|++|+|+...
T Consensus 66 ~~~~~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtGs~ 116 (452)
T 2cdu_A 66 EELSNLGANVQMRHQVTNVDPET--KTIK-VKDLITNEEKTEAYDKLIMTTGSK 116 (452)
T ss_dssp HHHHHTTCEEEESEEEEEEEGGG--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHcCCEEEeCCEEEEEEcCC--CEEE-EEecCCCceEEEECCEEEEccCCC
Confidence 44566799999999999998766 5443 443 2 4579999999999853
No 253
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=61.17 E-value=12 Score=36.98 Aligned_cols=44 Identities=14% Similarity=0.011 Sum_probs=33.6
Q ss_pred HHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccCh
Q 014807 146 MRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 146 l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~ 192 (418)
.++.|++++++++|++|..++ +.++ +.. +|+ ++.+|+||+|+..
T Consensus 68 ~~~~~i~~~~~~~V~~id~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~ 115 (565)
T 3ntd_A 68 KARFNVEVRVKHEVVAIDRAA--KLVT-VRRLLDGSEYQESYDTLLLSPGA 115 (565)
T ss_dssp HHHHCCEEETTEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCE
T ss_pred HHhcCcEEEECCEEEEEECCC--CEEE-EEecCCCCeEEEECCEEEECCCC
Confidence 345689999999999998766 5443 443 243 7899999999987
No 254
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=61.15 E-value=9.3 Score=36.67 Aligned_cols=46 Identities=15% Similarity=0.064 Sum_probs=34.0
Q ss_pred HHHhcCcEEEcCceeeEEEecCCCCeEEEEEEC----CeEEecCEEEEccChh
Q 014807 145 SMRTRGCEFLDGRRVTDFIYDEERCCISDVVCG----KETYSAGAVVLAVGIS 193 (418)
Q Consensus 145 ~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~----g~~~~ad~VV~A~p~~ 193 (418)
.+++.|.+++++++|++|..+. ..+. +... +.++.+|++|+|+...
T Consensus 66 ~~~~~~i~~~~~~~V~~id~~~--~~~~-~~~~~~~~~~~~~yd~lVIATGs~ 115 (437)
T 4eqs_A 66 FYDRKQITVKTYHEVIAINDER--QTVS-VLNRKTNEQFEESYDKLILSPGAS 115 (437)
T ss_dssp HHHHHCCEEEETEEEEEEETTT--TEEE-EEETTTTEEEEEECSEEEECCCEE
T ss_pred HHHhcCCEEEeCCeEEEEEccC--cEEE-EEeccCCceEEEEcCEEEECCCCc
Confidence 3456789999999999998765 4342 3332 2368899999999974
No 255
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=61.14 E-value=8.3 Score=37.31 Aligned_cols=50 Identities=18% Similarity=0.042 Sum_probs=33.4
Q ss_pred HHHHHHHHh------cCcEEEcCceeeEEEecCCCCeEEEEEE-----------------CC--eEEecCEEEEccCh
Q 014807 140 EPWMDSMRT------RGCEFLDGRRVTDFIYDEERCCISDVVC-----------------GK--ETYSAGAVVLAVGI 192 (418)
Q Consensus 140 ~~l~~~l~~------~G~~I~l~t~V~~I~~~~~~g~v~~v~~-----------------~g--~~~~ad~VV~A~p~ 192 (418)
+.|.+.+.+ .|++|++++.|.+|..+ +++.+|++ +| +++.||.||+++..
T Consensus 250 ~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~---~~v~~v~~~~~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~ 324 (456)
T 1lqt_A 250 KVLRGYADREPRPGHRRMVFRFLTSPIEIKGK---RKVERIVLGRNELVSDGSGRVAAKDTGEREELPAQLVVRSVGY 324 (456)
T ss_dssp HHHHHHHTCC-CTTSEEEEEECSEEEEEEECS---SSCCEEEEEEEEEEECSSSSEEEEEEEEEEEEECSEEEECSCE
T ss_pred HHHHHHhhcCCCCCCceEEEEeCCCCeEEecC---CcEeEEEEEEEEecCCCcccccccCCCceEEEEcCEEEEcccc
Confidence 444555555 78999999999999753 33333333 23 35788888888864
No 256
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=61.11 E-value=4.5 Score=38.76 Aligned_cols=34 Identities=18% Similarity=0.427 Sum_probs=24.4
Q ss_pred CCCCCEEEeccccc---cCCCccchHHHHHHHHHHHHH
Q 014807 336 TSFPNLFMAGDWIT---TRHGSWSQERSYVTGLEAANR 370 (418)
Q Consensus 336 ~~~~~l~laGd~~~---~~~g~~~~egAi~SG~~aA~~ 370 (418)
..++||||||+-+. ...|+ .+..|..||+.|++.
T Consensus 380 k~~~gLy~aGE~lD~~~~~GGy-nlq~a~stG~~ag~~ 416 (417)
T 3v76_A 380 KEVPGLYFVGECVDVTGWLGGY-NFQWAWASGFVAGQD 416 (417)
T ss_dssp TTSTTEEECGGGBSEEECSSSH-HHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEEEeEecccCCCCH-HHHHHHHHHHHHhCc
Confidence 36799999995432 11233 578999999988875
No 257
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=60.53 E-value=13 Score=35.58 Aligned_cols=47 Identities=17% Similarity=0.282 Sum_probs=35.1
Q ss_pred HHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccChh
Q 014807 144 DSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 193 (418)
Q Consensus 144 ~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~~ 193 (418)
+.+++.|+++++++.|..|..++ +.|. +.. +|+ ++.+|++|+|+...
T Consensus 64 ~~~~~~gv~~~~~~~v~~i~~~~--~~v~-~~~~~~g~~~~~~~d~lviAtG~~ 114 (447)
T 1nhp_A 64 EKMESRGVNVFSNTEITAIQPKE--HQVT-VKDLVSGEERVENYDKLIISPGAV 114 (447)
T ss_dssp HHHHHTTCEEEETEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHCCCEEEECCEEEEEeCCC--CEEE-EEecCCCceEEEeCCEEEEcCCCC
Confidence 44556799999999999998766 5443 443 254 48999999999864
No 258
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=59.17 E-value=5.5 Score=38.99 Aligned_cols=41 Identities=17% Similarity=0.251 Sum_probs=33.2
Q ss_pred hcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 148 TRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 148 ~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
+.|+++++++.|.+|..++ .. |.+ +|+++.+|++|+|+...
T Consensus 102 ~~gv~~~~g~~v~~id~~~--~~---V~~~~g~~i~yd~lviATGs~ 143 (493)
T 1m6i_A 102 NGGVAVLTGKKVVQLDVRD--NM---VKLNDGSQITYEKCLIATGGT 143 (493)
T ss_dssp TCEEEEEETCCEEEEEGGG--TE---EEETTSCEEEEEEEEECCCEE
T ss_pred cCCeEEEcCCEEEEEECCC--CE---EEECCCCEEECCEEEECCCCC
Confidence 4688999999999998765 43 344 67789999999999863
No 259
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=59.14 E-value=9.6 Score=36.47 Aligned_cols=51 Identities=14% Similarity=0.171 Sum_probs=37.0
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIST 194 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~ 194 (418)
+...+.+.+++.|++++. ..|++|..++ .. |++ +|+++.+|+||+|+....
T Consensus 61 ~~~~l~~~~~~~gv~~~~-~~v~~id~~~--~~---V~~~~g~~i~~d~lviAtG~~~ 112 (437)
T 3sx6_A 61 IAFPIRHYVERKGIHFIA-QSAEQIDAEA--QN---ITLADGNTVHYDYLMIATGPKL 112 (437)
T ss_dssp HEEECHHHHHTTTCEEEC-SCEEEEETTT--TE---EEETTSCEEECSEEEECCCCEE
T ss_pred HHHHHHHHHHHCCCEEEE-eEEEEEEcCC--CE---EEECCCCEEECCEEEECCCCCc
Confidence 333455566778999975 6899998755 42 445 567899999999998743
No 260
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=59.14 E-value=9.3 Score=37.13 Aligned_cols=43 Identities=16% Similarity=0.201 Sum_probs=33.3
Q ss_pred hcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccChh
Q 014807 148 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGIS 193 (418)
Q Consensus 148 ~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~~ 193 (418)
+.|+++++++.|..|..++ +.+. +.. +|+ ++.+|++|+|+...
T Consensus 105 ~~gv~~~~~~~v~~i~~~~--~~v~-v~~~~~g~~~~~~~d~lviAtG~~ 151 (480)
T 3cgb_A 105 KYGIDAKVRHEVTKVDTEK--KIVY-AEHTKTKDVFEFSYDRLLIATGVR 151 (480)
T ss_dssp TTCCEEESSEEEEEEETTT--TEEE-EEETTTCCEEEEECSEEEECCCEE
T ss_pred hcCCEEEeCCEEEEEECCC--CEEE-EEEcCCCceEEEEcCEEEECCCCc
Confidence 4489999999999998766 5443 444 355 78999999999864
No 261
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=58.60 E-value=18 Score=32.37 Aligned_cols=41 Identities=22% Similarity=0.101 Sum_probs=31.2
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.+|.+||||-|||-+ +.+...+.-|+.+|..||..+.+.+.
T Consensus 272 ~~Ts~pgIyA~GDv~--~~~~~~~~~A~~~G~~AA~~~~~yL~ 312 (314)
T 4a5l_A 272 PKTSVDGVFACGDVC--DRVYRQAIVAAGSGCMAALSCEKWLQ 312 (314)
T ss_dssp TBCSSTTEEECSTTT--CSSCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEEEecc--CCcchHHHHHHHHHHHHHHHHHHHHh
Confidence 458899999999984 33322455688899999999887764
No 262
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=58.31 E-value=16 Score=34.96 Aligned_cols=50 Identities=18% Similarity=0.258 Sum_probs=34.9
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC-eEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK-ETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g-~~~~ad~VV~A~p~~ 193 (418)
+.+.+.+.+++.|++++.++.+. + ++ +.+ .|.+ +| +++.+|+||+|+...
T Consensus 93 l~~~~~~~~~~~gv~~~~g~~~~-i--d~--~~v-~V~~~~G~~~i~~d~lViATGs~ 144 (455)
T 1ebd_A 93 LTGGVEGLLKGNKVEIVKGEAYF-V--DA--NTV-RVVNGDSAQTYTFKNAIIATGSR 144 (455)
T ss_dssp HHHHHHHHHHTTTCEEEESEEEE-E--ET--TEE-EEEETTEEEEEECSEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEEEEEE-c--cC--CeE-EEEeCCCcEEEEeCEEEEecCCC
Confidence 33445566677899999998764 3 33 444 3555 35 579999999999874
No 263
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=55.55 E-value=17 Score=34.96 Aligned_cols=38 Identities=13% Similarity=0.036 Sum_probs=30.4
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 294 ~~t~~~~iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~g~ 331 (463)
T 4dna_A 294 SRTSTPGIYALGDVT--DRV-QLTPVAIHEAMCFIETEYKN 331 (463)
T ss_dssp CBCSSTTEEECSGGG--SSC-CCHHHHHHHHHHHHHHHHSS
T ss_pred CCCCCCCEEEEEecC--CCC-CChHHHHHHHHHHHHHHcCC
Confidence 457889999999994 333 35678999999999999864
No 264
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=55.26 E-value=15 Score=35.49 Aligned_cols=42 Identities=21% Similarity=0.217 Sum_probs=30.8
Q ss_pred hcCcEEEcCceeeEEEecCCCCeEEEEEE--CCe--EEecCEEEEccCh
Q 014807 148 TRGCEFLDGRRVTDFIYDEERCCISDVVC--GKE--TYSAGAVVLAVGI 192 (418)
Q Consensus 148 ~~G~~I~l~t~V~~I~~~~~~g~v~~v~~--~g~--~~~ad~VV~A~p~ 192 (418)
+.|.++++++.|++|..++ +.+ .+.. +|+ ++.+|++|+|+..
T Consensus 78 ~~gi~~~~~~~V~~id~~~--~~v-~~~~~~~g~~~~~~~d~lviAtG~ 123 (472)
T 3iwa_A 78 NKDVEALVETRAHAIDRAA--HTV-EIENLRTGERRTLKYDKLVLALGS 123 (472)
T ss_dssp ---CEEECSEEEEEEETTT--TEE-EEEETTTCCEEEEECSEEEECCCE
T ss_pred hcCcEEEECCEEEEEECCC--CEE-EEeecCCCCEEEEECCEEEEeCCC
Confidence 4689999999999998766 544 3443 244 7899999999986
No 265
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=55.19 E-value=15 Score=34.64 Aligned_cols=45 Identities=16% Similarity=0.186 Sum_probs=35.1
Q ss_pred HHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccCh
Q 014807 142 WMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGI 192 (418)
Q Consensus 142 l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~ 192 (418)
..+.+.+.|.++++ ++|++|..++ .. |.+ +|+++.+|++|+|+..
T Consensus 63 ~~~~~~~~~i~~~~-~~v~~id~~~--~~---v~~~~g~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 63 PEKFFQDQAIELIS-DRMVSIDREG--RK---LLLASGTAIEYGHLVLATGA 108 (404)
T ss_dssp CHHHHHHTTEEEEC-CCEEEEETTT--TE---EEESSSCEEECSEEEECCCE
T ss_pred CHHHHHhCCCEEEE-EEEEEEECCC--CE---EEECCCCEEECCEEEEeeCC
Confidence 34455678999999 9999998765 43 444 6778999999999986
No 266
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=52.85 E-value=20 Score=34.67 Aligned_cols=38 Identities=11% Similarity=0.051 Sum_probs=29.9
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 314 ~~t~~~~Iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 351 (484)
T 3o0h_A 314 MTTNVSHIWAVGDVT--GHI-QLTPVAIHDAMCFVKNAFEN 351 (484)
T ss_dssp SBCSSTTEEECGGGG--TSC-CCHHHHHHHHHHHHHHHHC-
T ss_pred CCCCCCCEEEEEecC--CCC-cCHHHHHHHHHHHHHHHcCC
Confidence 357889999999994 333 35678999999999999864
No 267
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=52.79 E-value=18 Score=34.93 Aligned_cols=38 Identities=24% Similarity=0.211 Sum_probs=30.5
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 296 ~~t~~~~Iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 333 (466)
T 3l8k_A 296 MKTNIPNVFATGDAN--GLA-PYYHAAVRMSIAAANNIMAN 333 (466)
T ss_dssp CBCSSTTEEECGGGT--CSC-CSHHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCCEEEEEecC--CCC-ccHhHHHHHHHHHHHHHhCC
Confidence 356789999999994 333 35678999999999999864
No 268
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=52.28 E-value=19 Score=34.56 Aligned_cols=50 Identities=16% Similarity=0.049 Sum_probs=35.3
Q ss_pred hHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CC--eEEecCEEEEccChh
Q 014807 138 IFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GK--ETYSAGAVVLAVGIS 193 (418)
Q Consensus 138 l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g--~~~~ad~VV~A~p~~ 193 (418)
+.+.+.+.+++.|++++.++.+. .++ +.+ .|.+ +| +++.+|+||+|+...
T Consensus 93 l~~~l~~~~~~~gv~~~~g~~~~---id~--~~v-~V~~~~G~~~~~~~d~lViAtG~~ 145 (464)
T 2a8x_A 93 RVAGVHFLMKKNKITEIHGYGTF---ADA--NTL-LVDLNDGGTESVTFDNAIIATGSS 145 (464)
T ss_dssp HHHHHHHHHHHTTCEEECEEEEE---SSS--SEE-EEEETTSCCEEEEEEEEEECCCEE
T ss_pred HHHHHHHHHHhCCCEEEEeEEEE---ecC--CeE-EEEeCCCceEEEEcCEEEECCCCC
Confidence 44445666777899999998754 333 444 3555 46 679999999999874
No 269
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=51.88 E-value=11 Score=37.30 Aligned_cols=46 Identities=13% Similarity=0.320 Sum_probs=33.6
Q ss_pred HHHHHhcCcEEEc--CceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhH
Q 014807 143 MDSMRTRGCEFLD--GRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 195 (418)
Q Consensus 143 ~~~l~~~G~~I~l--~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~ 195 (418)
.+.+.+.++++.. +++|++|.. + | | +..+| ++++|.||+||.....
T Consensus 345 ~~al~~~nV~lv~~~~~~I~~it~-~--g-v--~~~dG-~~~~D~IV~ATGf~~~ 392 (545)
T 3uox_A 345 YETYNRDNVHLVDIREAPIQEVTP-E--G-I--KTADA-AYDLDVIIYATGFDAV 392 (545)
T ss_dssp HHHTTSTTEEEEETTTSCEEEEET-T--E-E--EESSC-EEECSEEEECCCCBSS
T ss_pred HHHhcCCCEEEEecCCCCceEEcc-C--e-E--EeCCC-eeecCEEEECCccccc
Confidence 3455666888886 889999863 2 3 2 23467 9999999999998753
No 270
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=51.88 E-value=11 Score=37.26 Aligned_cols=43 Identities=26% Similarity=0.228 Sum_probs=31.1
Q ss_pred CCCCCCCEEEeccccccCC------CccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAGDWITTRH------GSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~------g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
.+++++|||-||+...++. +..++-.|+..|++|++.+.+...
T Consensus 363 ~~t~I~GLyAaGE~a~~g~hGanrl~gnsl~~~~vfG~~Ag~~aa~~~~ 411 (540)
T 1chu_A 363 GRTDVEGLYAIGEVSYTGLHGANRMASNSLLECLVYGWSAAEDITRRMP 411 (540)
T ss_dssp CBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCCccCCEEeccccccccccCCCcCcchhHHHHHHHHHHHHHHHHHhcc
Confidence 3478999999999852221 113567789999999999887654
No 271
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=51.50 E-value=16 Score=34.17 Aligned_cols=39 Identities=23% Similarity=0.141 Sum_probs=30.9
Q ss_pred CCCCCEEEeccccccCCCc-cchHHHHHHHHHHHHHHHHHh
Q 014807 336 TSFPNLFMAGDWITTRHGS-WSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~-~~~egAi~SG~~aA~~Il~~~ 375 (418)
+..+|+|-+||.+. ..+. .+...|...|..+|+.|+..+
T Consensus 284 t~~p~VfAiGDva~-~~~~pk~a~~A~~qa~v~A~ni~~~l 323 (401)
T 3vrd_B 284 SLQPGIHVIGDACN-AAPMPKSAYSANSQAKVAAAAVVALL 323 (401)
T ss_dssp SSSTTEEECGGGBC-CTTSCBSHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCEEEeccccc-CCCCCchHHHHHHHHHHHHHHHHHHh
Confidence 67899999999852 2222 356789999999999999877
No 272
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=51.14 E-value=23 Score=34.39 Aligned_cols=39 Identities=21% Similarity=0.199 Sum_probs=30.6
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+. +.+ .....|+..|+.||+.|+..
T Consensus 314 ~~t~~~~IyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~g~ 352 (488)
T 3dgz_A 314 EATSVPHIYAIGDVAE-GRP-ELTPTAIKAGKLLAQRLFGK 352 (488)
T ss_dssp SBCSSTTEEECGGGBT-TCC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEeEEecC-CCC-cchhHHHHHHHHHHHHHcCC
Confidence 4578899999999952 333 35678999999999999864
No 273
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=50.56 E-value=17 Score=35.40 Aligned_cols=38 Identities=24% Similarity=0.115 Sum_probs=30.5
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 301 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 338 (492)
T 3ic9_A 301 LQTSVDHIFVAGDAN--NTL-TLLHEAADDGKVAGTNAGAY 338 (492)
T ss_dssp CBCSSTTEEECGGGG--TSS-CSHHHHHHHHHHHHHHHHHT
T ss_pred ccCCCCCEEEEEecC--CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 457789999999995 333 35678999999999999873
No 274
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=50.46 E-value=17 Score=34.86 Aligned_cols=42 Identities=21% Similarity=0.209 Sum_probs=32.0
Q ss_pred HhcCcEEEcCceeeEEEecCCCCeEEEEEEC-C-eEEecCEEEEccChh
Q 014807 147 RTRGCEFLDGRRVTDFIYDEERCCISDVVCG-K-ETYSAGAVVLAVGIS 193 (418)
Q Consensus 147 ~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~-g-~~~~ad~VV~A~p~~ 193 (418)
++.|+++++++.|++|..++ ..|.++ + .++.+|+||+|+...
T Consensus 70 ~~~gi~v~~~~~v~~i~~~~-----~~v~~~~g~~~~~~d~lviAtG~~ 113 (449)
T 3kd9_A 70 KKRGIDLHLNAEVIEVDTGY-----VRVRENGGEKSYEWDYLVFANGAS 113 (449)
T ss_dssp HHTTCEEETTCEEEEECSSE-----EEEECSSSEEEEECSEEEECCCEE
T ss_pred HhcCcEEEecCEEEEEecCC-----CEEEECCceEEEEcCEEEECCCCC
Confidence 56799999999999986532 234554 4 379999999999863
No 275
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=50.41 E-value=13 Score=34.99 Aligned_cols=41 Identities=15% Similarity=-0.019 Sum_probs=31.0
Q ss_pred CCCCCCCEEEeccccccCCC-ccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHG-SWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g-~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|+|.+||....... .+....|...|+.||+.|+..
T Consensus 253 ~~t~~~~IyA~GD~a~~~~~~~~~~~~A~~qg~~aa~~i~g~ 294 (385)
T 3klj_A 253 METSIKDIYACGDVAEFYGKNPGLINIANKQGEVAGLNACGE 294 (385)
T ss_dssp CBCSSTTEEECGGGEEETTBCCCCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEEeeEecCCCcccHHHHHHHHHHHHHHHhcCC
Confidence 45778999999999632111 146788999999999999864
No 276
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=50.35 E-value=21 Score=34.48 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=30.5
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 319 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 356 (478)
T 3dk9_A 319 QNTNVKGIYAVGDVC--GKA-LLTPVAIAAGRKLAHRLFEY 356 (478)
T ss_dssp CBCSSTTEEECGGGG--CSS-CCHHHHHHHHHHHHHHHHSC
T ss_pred cccCCCCEEEEEecC--CCC-ccHhHHHHHHHHHHHHHcCC
Confidence 357789999999994 333 36678999999999999865
No 277
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=50.22 E-value=22 Score=34.35 Aligned_cols=39 Identities=21% Similarity=0.169 Sum_probs=30.7
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+. +.+ .....|+..|+.||+.|+..
T Consensus 314 ~~t~~~~IyA~GD~~~-~~~-~~~~~A~~~g~~aa~~i~g~ 352 (483)
T 3dgh_A 314 EATNVANIYAVGDIIY-GKP-ELTPVAVLAGRLLARRLYGG 352 (483)
T ss_dssp CBCSSTTEEECSTTBT-TSC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEcccC-CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 4578899999999952 333 36678999999999999854
No 278
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=49.22 E-value=23 Score=34.11 Aligned_cols=39 Identities=23% Similarity=0.344 Sum_probs=30.9
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHh
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|....
T Consensus 306 ~~t~~~~Iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~g~~ 344 (476)
T 3lad_A 306 CATSVPGVYAIGDVV--RGA-MLAHKASEEGVVVAERIAGHK 344 (476)
T ss_dssp SBCSSTTEEECGGGS--SSC-CCHHHHHHHHHHHHHHHHHCC
T ss_pred cccCCCCEEEEEccC--CCc-ccHHHHHHHHHHHHHHhcCCC
Confidence 347789999999994 333 356789999999999998653
No 279
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=48.20 E-value=14 Score=33.95 Aligned_cols=40 Identities=15% Similarity=0.243 Sum_probs=29.4
Q ss_pred CCCCEEEecccccc---CCCc-cchHHHHHHHHHHHHHHHHHhC
Q 014807 337 SFPNLFMAGDWITT---RHGS-WSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 337 ~~~~l~laGd~~~~---~~g~-~~~egAi~SG~~aA~~Il~~~~ 376 (418)
-+||||++|..... .+.. ...-+-+.||..||+.|++++.
T Consensus 282 ~~~~~~~~g~~~~~~~~~~r~g~~fg~m~~sg~~~a~~~~~~~~ 325 (326)
T 2gjc_A 282 GVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILKHFA 325 (326)
T ss_dssp TSTTEEECTHHHHHHHTCCBCCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCEEECChHHHHhcCCCCCChhhhhhhhhhHHHHHHHHHHhh
Confidence 47999999987531 1111 3456778999999999999864
No 280
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=48.04 E-value=16 Score=35.55 Aligned_cols=37 Identities=14% Similarity=0.245 Sum_probs=30.5
Q ss_pred CCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 337 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 337 ~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
..+|+|.+||.. +.+ ....|+..|+.||..|...++.
T Consensus 342 s~~~vya~GD~~--~~~--~~~~A~~~g~~aa~~i~~~lg~ 378 (493)
T 1y56_A 342 IKDGIYVAGSAV--SIK--PHYANYLEGKLVGAYILKEFGY 378 (493)
T ss_dssp EETTEEECSTTT--CCC--CHHHHHHHHHHHHHHHHHHTTC
T ss_pred cCCCEEEEeccC--Ccc--CHHHHHHHHHHHHHHHHHHcCC
Confidence 468999999994 443 5678999999999999998863
No 281
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=47.86 E-value=30 Score=30.86 Aligned_cols=42 Identities=29% Similarity=0.317 Sum_probs=32.7
Q ss_pred CCCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 333 RGFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 333 ~~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
..+|.+||||-|||.+ +.+...+..|+..|+.||..|.+.+.
T Consensus 265 ~~~Ts~pgIyA~GDv~--~~~~~~~~~A~~~G~~AA~~i~~~L~ 306 (312)
T 4gcm_A 265 DMTTSVPGIFAAGDVR--DKGLRQIVTATGDGSIAAQSAAEYIE 306 (312)
T ss_dssp TSBCSSTTEEECSTTB--SCSCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCccCCCCEEEEeecC--CCcchHHHHHHHHHHHHHHHHHHHHH
Confidence 3468899999999984 33434567899999999999977653
No 282
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=47.66 E-value=8.4 Score=38.22 Aligned_cols=43 Identities=14% Similarity=0.173 Sum_probs=32.2
Q ss_pred HHhcCcEEEc--CceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChhhH
Q 014807 146 MRTRGCEFLD--GRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGISTL 195 (418)
Q Consensus 146 l~~~G~~I~l--~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~~~ 195 (418)
+.+.++++.. +++|++|.. + | |++ +|+++++|.||+||.....
T Consensus 340 l~~~nV~lv~~~~~~I~~it~-~--g----v~~~dG~~~~~DvIV~ATGf~~~ 385 (540)
T 3gwf_A 340 YNRPNVEAVAIKENPIREVTA-K--G----VVTEDGVLHELDVLVFATGFDAV 385 (540)
T ss_dssp GGSTTEEEEETTTSCEEEECS-S--E----EEETTCCEEECSEEEECCCBSCS
T ss_pred hcCCCEEEEeCCCCCccEEec-C--e----EEcCCCCEEECCEEEECCccCcc
Confidence 3456788875 789998863 1 3 445 6788999999999998754
No 283
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=47.62 E-value=26 Score=33.69 Aligned_cols=38 Identities=13% Similarity=0.132 Sum_probs=29.6
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 305 ~~t~~~~Iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~g~ 342 (470)
T 1dxl_A 305 FSTNVSGVYAIGDVI--PGP-MLAHKAEEDGVACVEYLAGK 342 (470)
T ss_dssp CBCSSTTEEECSTTS--SSC-CCHHHHHHHHHHHHHHHTTS
T ss_pred CccCCCCEEEEeccC--CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 346789999999994 333 35567999999999999853
No 284
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=46.92 E-value=28 Score=34.15 Aligned_cols=39 Identities=18% Similarity=0.148 Sum_probs=30.5
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.+|..+|||.+||.+. +.+ .....|+..|+.||+.|+..
T Consensus 342 ~~Ts~~~IyA~GD~~~-g~~-~~~~~A~~~g~~aa~~i~g~ 380 (519)
T 3qfa_A 342 EQTNVPYIYAIGDILE-DKV-ELTPVAIQAGRLLAQRLYAG 380 (519)
T ss_dssp SBCSSTTEEECGGGBS-SSC-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEeccC-CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 3477899999999951 333 46678999999999999854
No 285
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=46.66 E-value=22 Score=34.49 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=31.0
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHh
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|....
T Consensus 326 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~g~~ 364 (491)
T 3urh_A 326 FQTSIAGVYAIGDVV--RGP-MLAHKAEDEGVAVAEIIAGQA 364 (491)
T ss_dssp CBCSSTTEEECGGGS--SSC-CCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCEEEEEecC--CCc-cchhHHHHHHHHHHHHHcCCC
Confidence 457789999999994 333 467789999999999998643
No 286
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=45.57 E-value=40 Score=31.89 Aligned_cols=45 Identities=16% Similarity=0.167 Sum_probs=33.0
Q ss_pred HHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE-CCeEEecCEEEEccChh
Q 014807 143 MDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC-GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 143 ~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~-~g~~~~ad~VV~A~p~~ 193 (418)
.+.+++.|++++.+ .|+.|..++ .. |.+ +++++.+|++|+|+...
T Consensus 63 ~~~~~~~gv~~~~~-~v~~id~~~--~~---v~~~~g~~i~~d~liiAtG~~ 108 (430)
T 3h28_A 63 APLLPKFNIEFINE-KAESIDPDA--NT---VTTQSGKKIEYDYLVIATGPK 108 (430)
T ss_dssp TTTGGGGTEEEECS-CEEEEETTT--TE---EEETTCCEEECSEEEECCCCE
T ss_pred HHHHHhcCCEEEEE-EEEEEECCC--CE---EEECCCcEEECCEEEEcCCcc
Confidence 33445678999875 899988654 42 445 56779999999999865
No 287
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=45.00 E-value=28 Score=33.61 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=29.5
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+.
T Consensus 312 ~~t~~~~IyA~GD~~--~~~-~l~~~A~~~g~~aa~~i~g 348 (482)
T 1ojt_A 312 MRTNVPHIYAIGDIV--GQP-MLAHKAVHEGHVAAENCAG 348 (482)
T ss_dssp SBCSSTTEEECGGGT--CSS-CCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEEccc--CCC-ccHHHHHHHHHHHHHHHcC
Confidence 356789999999995 333 3557799999999999985
No 288
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=44.79 E-value=30 Score=33.33 Aligned_cols=38 Identities=16% Similarity=0.139 Sum_probs=30.1
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|+|.+||.. +.+ .....|+..|+.||+.|+..
T Consensus 313 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 350 (478)
T 1v59_A 313 FNSKFPHIKVVGDVT--FGP-MLAHKAEEEGIAAVEMLKTG 350 (478)
T ss_dssp SBCSSTTEEECGGGS--SSC-CCHHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEeeccC--CCc-ccHHHHHHHHHHHHHHHcCC
Confidence 346789999999995 333 35678999999999999874
No 289
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=44.11 E-value=29 Score=33.50 Aligned_cols=38 Identities=21% Similarity=0.259 Sum_probs=30.1
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.. +.+ .....|+..|+.||+.|+..
T Consensus 310 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 347 (479)
T 2hqm_A 310 QNTNVPNIYSLGDVV--GKV-ELTPVAIAAGRKLSNRLFGP 347 (479)
T ss_dssp CBCSSTTEEECGGGT--TSS-CCHHHHHHHHHHHHHHHHSC
T ss_pred CccCCCCEEEEEecC--CCc-ccHHHHHHHHHHHHHHhcCC
Confidence 356789999999994 333 35678999999999999853
No 290
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=43.48 E-value=31 Score=34.37 Aligned_cols=39 Identities=18% Similarity=0.116 Sum_probs=30.4
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.+|..+|||.+||.. .+.+ .....|+..|+.||+.|+..
T Consensus 421 ~~ts~~~VyA~GD~~-~~~~-~~~~~A~~~g~~aa~~i~~~ 459 (598)
T 2x8g_A 421 EQTTVSNVYAIGDIN-AGKP-QLTPVAIQAGRYLARRLFAG 459 (598)
T ss_dssp SBCSSTTEEECGGGB-TTSC-CCHHHHHHHHHHHHHHHHHC
T ss_pred CcCCCCCEEEEeeec-CCCC-ccHHHHHHhHHHHHHHHhcC
Confidence 357789999999995 2222 35678999999999999864
No 291
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=43.05 E-value=53 Score=31.41 Aligned_cols=37 Identities=22% Similarity=0.208 Sum_probs=29.2
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++..+|+|.+||.. +.+ .....|...|+.||+.|..
T Consensus 293 ~~t~~~~Iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~g 329 (458)
T 1lvl_A 293 CQTSMHNVWAIGDVA--GEP-MLAHRAMAQGEMVAEIIAG 329 (458)
T ss_dssp CBCSSTTEEECGGGG--CSS-CCHHHHHHHHHHHHHHHTT
T ss_pred CcCCCCCEEEeeccC--CCc-ccHHHHHHHHHHHHHHhcC
Confidence 346789999999995 333 3567799999999999975
No 292
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=42.41 E-value=32 Score=32.86 Aligned_cols=38 Identities=13% Similarity=0.128 Sum_probs=29.9
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|+|.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 291 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 328 (450)
T 1ges_A 291 QNTNIEGIYAVGDNT--GAV-ELTPVAVAAGRRLSERLFNN 328 (450)
T ss_dssp SBCSSTTEEECSGGG--TSC-CCHHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeccC--CCC-ccHHHHHHHHHHHHHHHcCC
Confidence 357789999999994 333 35677999999999999863
No 293
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=41.91 E-value=35 Score=32.75 Aligned_cols=38 Identities=18% Similarity=0.223 Sum_probs=29.8
Q ss_pred CCCCCCCEEEeccccccC-CCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTR-HGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~-~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.. + .+ .....|+..|+.||+.|+..
T Consensus 302 ~~t~~~~IyA~GD~~--~~~~-~~~~~A~~~g~~aa~~i~~~ 340 (468)
T 2qae_A 302 FETSIPDVYAIGDVV--DKGP-MLAHKAEDEGVACAEILAGK 340 (468)
T ss_dssp SBCSSTTEEECGGGB--SSSC-SCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEeeccC--CCCC-ccHhHHHHHHHHHHHHHcCC
Confidence 357789999999994 3 22 35677999999999999753
No 294
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=40.70 E-value=32 Score=33.14 Aligned_cols=38 Identities=16% Similarity=0.195 Sum_probs=30.0
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.. +.+ .....|...|+.||+.|+..
T Consensus 308 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 345 (474)
T 1zmd_A 308 FQTKIPNIYAIGDVV--AGP-MLAHKAEDEGIICVEGMAGG 345 (474)
T ss_dssp CBCSSTTEEECGGGS--SSC-CCHHHHHHHHHHHHHHHTTC
T ss_pred CccCCCCEEEeeecC--CCC-ccHHHHHHHHHHHHHHhcCC
Confidence 347789999999994 333 35677999999999999864
No 295
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=40.62 E-value=19 Score=34.73 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=30.1
Q ss_pred CCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 336 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
+..+|+|.+||... ++. +.+..|+..|..+|+.|+.++.
T Consensus 349 t~~pgvya~GD~~~-gp~-~~i~~a~~~g~~~a~~i~~~l~ 387 (456)
T 1lqt_A 349 NGSPNEYVVGWIKR-GPT-GVIGTNKKDAQDTVDTLIKNLG 387 (456)
T ss_dssp TTCSSEEECTHHHH-CSC-SCTTHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeccCC-CCc-hhHHHHHHHHHHHHHHHHHHHH
Confidence 46799999999853 222 3455689999999999998874
No 296
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=39.84 E-value=38 Score=32.50 Aligned_cols=36 Identities=22% Similarity=0.316 Sum_probs=28.9
Q ss_pred CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 335 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 335 ~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
++..+|||.+||.. +.+ .....|+..|+.||+.|+.
T Consensus 291 ~t~~~~Iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~g 326 (463)
T 2r9z_A 291 NTNVPGVYALGDIT--GRD-QLTPVAIAAGRRLAERLFD 326 (463)
T ss_dssp BCSSTTEEECGGGG--TSC-CCHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEeecC--CCc-ccHHHHHHHHHHHHHHHcC
Confidence 46789999999994 333 3567799999999999975
No 297
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=39.73 E-value=28 Score=37.47 Aligned_cols=39 Identities=26% Similarity=0.257 Sum_probs=31.5
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHh
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
.+|..+|||.+||-+ ..+ ..+..|+..|+.||+.|...+
T Consensus 469 ~~Ts~~~VfA~GD~~--~~~-~~~~~A~~~G~~aA~~i~~~L 507 (1025)
T 1gte_A 469 MQTSEPWVFAGGDIV--GMA-NTTVESVNDGKQASWYIHKYI 507 (1025)
T ss_dssp CBCSSTTEEECSGGG--CSC-CCHHHHHHHHHHHHHHHHHHH
T ss_pred CccCCCCEEEeCCCC--CCc-hHHHHHHHHHHHHHHHHHHHH
Confidence 357789999999995 223 467789999999999998765
No 298
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=39.57 E-value=39 Score=32.77 Aligned_cols=37 Identities=16% Similarity=0.147 Sum_probs=29.8
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++..+|+|.+||.+ +.+ .....|+..|+.||+.|+.
T Consensus 314 ~~t~~~~IyA~GD~~--~~~-~l~~~A~~~g~~aa~~i~g 350 (490)
T 1fec_A 314 SKTNVDNIYAIGDVT--DRV-MLTPVAINEGAAFVDTVFA 350 (490)
T ss_dssp CBCSSTTEEECGGGG--CSC-CCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccC--CCc-cCHHHHHHHHHHHHHHhcC
Confidence 356789999999995 322 3667899999999999986
No 299
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=39.39 E-value=39 Score=32.79 Aligned_cols=37 Identities=19% Similarity=0.233 Sum_probs=29.7
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+.
T Consensus 318 ~~t~~~~IyA~GD~~--~~~-~l~~~A~~~g~~aa~~i~g 354 (495)
T 2wpf_A 318 SRTNVPNIYAIGDIT--DRL-MLTPVAINEGAALVDTVFG 354 (495)
T ss_dssp CBCSSTTEEECGGGG--CSC-CCHHHHHHHHHHHHHHHHS
T ss_pred CccCCCCEEEEeccC--CCc-cCHHHHHHHHHHHHHHhcC
Confidence 356789999999995 323 3567899999999999985
No 300
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=39.27 E-value=24 Score=35.48 Aligned_cols=42 Identities=26% Similarity=0.252 Sum_probs=30.6
Q ss_pred CCCCCCCEEEeccccccC-CC-----ccchHHHHHHHHHHHHHHHHHh
Q 014807 334 GFTSFPNLFMAGDWITTR-HG-----SWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~-~g-----~~~~egAi~SG~~aA~~Il~~~ 375 (418)
.+++++|||-||+...++ +| ..++-.|+..|+.|++.+.+..
T Consensus 368 ~~~~IpGLyAaGe~a~~g~hGanrl~gnsl~~~~vfGr~Ag~~aa~~~ 415 (602)
T 1kf6_A 368 CETRIKGLFAVGECSSVGLHGANRLGSNSLAELVVFGRLAGEQATERA 415 (602)
T ss_dssp SBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CccccCCEEEccccccccccCCCCCccHHHHHHHHHHHHHHHHHHHhh
Confidence 456899999999974211 11 1246779999999999988775
No 301
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=38.51 E-value=35 Score=32.81 Aligned_cols=37 Identities=27% Similarity=0.297 Sum_probs=29.3
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++..+|+|.+||.+ +.+ .....|...|+.||+.|..
T Consensus 297 ~~t~~~~Iya~GD~~--~~~-~l~~~A~~~g~~aa~~i~g 333 (464)
T 2eq6_A 297 METSVPGVYAIGDAA--RPP-LLAHKAMREGLIAAENAAG 333 (464)
T ss_dssp CBCSSTTEEECGGGT--CSS-CCHHHHHHHHHHHHHHHTT
T ss_pred cccCCCCEEEEeccC--CCc-ccHHHHHHHHHHHHHHhcC
Confidence 346789999999995 333 3566799999999999975
No 302
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=37.93 E-value=45 Score=31.78 Aligned_cols=37 Identities=22% Similarity=0.353 Sum_probs=29.4
Q ss_pred CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 335 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 335 ~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
++..+++|.+||.+ +.+ .....|...|+.||+.|+..
T Consensus 291 ~t~~~~iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 327 (455)
T 2yqu_A 291 RTRVPHIYAIGDVV--RGP-MLAHKASEEGIAAVEHMVRG 327 (455)
T ss_dssp BCSSTTEEECGGGS--SSC-CCHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCEEEEecCC--CCc-cCHHHHHHhHHHHHHHHcCC
Confidence 46689999999994 333 35667999999999999864
No 303
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=37.49 E-value=37 Score=32.60 Aligned_cols=38 Identities=26% Similarity=0.164 Sum_probs=29.9
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|+|.+||.+ +.+ .....|+..|+.||..|+..
T Consensus 297 ~~t~~~~iya~GD~~--~~~-~~~~~A~~~g~~aa~~i~~~ 334 (467)
T 1zk7_A 297 MRTSNPNIYAAGDCT--DQP-QFVYVAAAAGTRAAINMTGG 334 (467)
T ss_dssp CBCSSTTEEECSTTB--SSC-CCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEeccC--CCc-ccHHHHHHHHHHHHHHHcCC
Confidence 346789999999995 333 35678999999999998753
No 304
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=37.20 E-value=36 Score=33.06 Aligned_cols=38 Identities=16% Similarity=0.012 Sum_probs=29.7
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|+..
T Consensus 305 ~~t~~~~IyA~GD~~--~~~-~l~~~A~~~g~~aa~~i~g~ 342 (499)
T 1xdi_A 305 SRTLATGIYAAGDCT--GLL-PLASVAAMQGRIAMYHALGE 342 (499)
T ss_dssp SBCSSTTEEECSGGG--TSC-SCHHHHHHHHHHHHHHHTTC
T ss_pred cccCCCCEEEEeccC--CCc-ccHHHHHHHHHHHHHHhcCC
Confidence 346789999999995 333 34567999999999999753
No 305
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=36.99 E-value=18 Score=33.50 Aligned_cols=39 Identities=15% Similarity=0.250 Sum_probs=29.0
Q ss_pred CCCEEEecccccc---CCCc-cchHHHHHHHHHHHHHHHHHhC
Q 014807 338 FPNLFMAGDWITT---RHGS-WSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 338 ~~~l~laGd~~~~---~~g~-~~~egAi~SG~~aA~~Il~~~~ 376 (418)
+||||.+|-.+.. .+.+ ...-+-+.||+.||+.|++++.
T Consensus 293 ~~gl~~~gm~~~~~~g~~rmgp~fg~m~~sg~~~a~~~~~~~~ 335 (344)
T 3jsk_A 293 VPGLIVGGMELSEIDGANRMGPTFGAMALSGVKAAHEAIRVFD 335 (344)
T ss_dssp ETTEEECGGGHHHHHTCEECCSCCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEechhhHhhcCCCCCCcccceeeecCHHHHHHHHHHHH
Confidence 5899999987641 1111 3455678899999999999886
No 306
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=36.16 E-value=38 Score=33.14 Aligned_cols=37 Identities=30% Similarity=0.318 Sum_probs=29.6
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHH
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~ 373 (418)
.++..+|||.+||.+ +.+ .....|+..|+.||+.|..
T Consensus 341 ~~t~~~~IyA~GD~~--~~~-~~~~~A~~~g~~aa~~i~g 377 (523)
T 1mo9_A 341 LQTSVPNVYAVGDLI--GGP-MEMFKARKSGCYAARNVMG 377 (523)
T ss_dssp SBCSSTTEEECGGGG--CSS-CSHHHHHHHHHHHHHHHTT
T ss_pred CccCCCCEEEEeecC--CCc-ccHHHHHHHHHHHHHHHcC
Confidence 356789999999995 333 3567799999999999975
No 307
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=35.61 E-value=22 Score=35.28 Aligned_cols=41 Identities=22% Similarity=0.211 Sum_probs=29.9
Q ss_pred CCCCCEEEeccccccCCC-----ccchHHHHHHHHHHHHHHHHHhC
Q 014807 336 TSFPNLFMAGDWITTRHG-----SWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g-----~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
++++|||-||+-...-+| ..++-.|+..|++|++.+.+...
T Consensus 519 ~~I~GLyAaGe~~~g~~g~~~~~g~sl~~~~v~Gr~Ag~~aa~~~~ 564 (566)
T 1qo8_A 519 KPIDGLFAAGEVTGGVHGYNRLGGNAIADTVVFGRIAGDNAAKHAL 564 (566)
T ss_dssp CEEEEEEECSTTBCSSSTTCCCTTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CEeCCEEecccccCCCCCCCCCchhhHHHHHHHHHHHHHHHHHHhh
Confidence 689999999998521111 13466799999999999877653
No 308
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=35.38 E-value=27 Score=31.04 Aligned_cols=40 Identities=18% Similarity=0.242 Sum_probs=30.9
Q ss_pred CCCCEEEeccccccC-----CCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 337 SFPNLFMAGDWITTR-----HGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 337 ~~~~l~laGd~~~~~-----~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
..|++|.+|+.+... .+ .+..+++.||..+|..|.+.+.+
T Consensus 232 ~~p~i~a~G~~~~~~~g~~~~g-p~~~~~~~sG~~~a~~i~~~l~~ 276 (284)
T 1rp0_A 232 VVPGMIVTGMEVAEIDGAPRMG-PTFGAMMISGQKAGQLALKALGL 276 (284)
T ss_dssp EETTEEECTHHHHHHHTCEECC-SCCHHHHHHHHHHHHHHHHHTTC
T ss_pred ccCCEEEEeeehhhhcCCCCcC-hHHHHHHHhHHHHHHHHHHHhhh
Confidence 348999999875321 12 35688999999999999999873
No 309
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=34.99 E-value=37 Score=36.23 Aligned_cols=38 Identities=16% Similarity=0.143 Sum_probs=31.5
Q ss_pred CCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 336 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
+..+|||.+||.. +.+ .+..|+..|..||..|+..++.
T Consensus 408 ts~p~IyAaGD~a--~~~--~l~~A~~~G~~aA~~i~~~lg~ 445 (965)
T 2gag_A 408 DAVANQHLAGAMT--GRL--DTASALSTGAATGAAAATAAGF 445 (965)
T ss_dssp SCCTTEEECGGGG--TCC--SHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCCCCEEEEEecC--Cch--hHHHHHHHHHHHHHHHHHHcCC
Confidence 5789999999994 443 3458999999999999999875
No 310
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=34.78 E-value=26 Score=33.75 Aligned_cols=38 Identities=11% Similarity=0.073 Sum_probs=29.8
Q ss_pred CCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 338 FPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 338 ~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
.+|||.+||... +.. +.+..|+..|..+|+.|+.++..
T Consensus 359 ~p~vya~Gd~~~-g~~-~~i~~a~~~g~~aa~~i~~~l~~ 396 (460)
T 1cjc_A 359 VPGLYCSGWVKR-GPT-GVITTTMTDSFLTGQILLQDLKA 396 (460)
T ss_dssp CTTEEECTHHHH-CTT-CCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCc-CCC-ccHHHHHHHHHHHHHHHHHHHHh
Confidence 699999999852 222 34667999999999999998753
No 311
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=34.13 E-value=25 Score=34.85 Aligned_cols=43 Identities=21% Similarity=0.360 Sum_probs=31.0
Q ss_pred HHhcCcEEE--cCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhH
Q 014807 146 MRTRGCEFL--DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 195 (418)
Q Consensus 146 l~~~G~~I~--l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~ 195 (418)
+.+.++++. ..++|++|.. + | | +..+| ++++|.||+||.....
T Consensus 353 l~~~~V~lvd~~~~~I~~it~-~--g-v--~~~dG-~~~~D~iI~ATGf~~~ 397 (549)
T 4ap3_A 353 YNRDNVELVDLRSTPIVGMDE-T--G-I--VTTGA-HYDLDMIVLATGFDAM 397 (549)
T ss_dssp GGSTTEEEEETTTSCEEEEET-T--E-E--EESSC-EEECSEEEECCCEEES
T ss_pred hcCCCEEEEeCCCCCceEEeC-C--c-E--EeCCC-ceecCEEEECCccccc
Confidence 355678887 3588998863 2 3 2 23467 9999999999998754
No 312
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=32.66 E-value=25 Score=34.77 Aligned_cols=38 Identities=16% Similarity=0.191 Sum_probs=30.2
Q ss_pred CCCEEEeccccccCCCc--cchHHHHHHHHHHHHHHHHHh
Q 014807 338 FPNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 338 ~~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~~~ 375 (418)
.++++++||..+...+. .+|+.+++.+...|.+|...+
T Consensus 308 ~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~La~~l 347 (549)
T 2r0c_A 308 AGRVFLTGDAAHTLSPSGGFGMNTGIGSAADLGWKLAATL 347 (549)
T ss_dssp ETTEEECGGGTEECCCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEccccccCCCccCCccccccHHHHHHHHHHHHHH
Confidence 36899999999866665 568889999999988876543
No 313
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=32.32 E-value=23 Score=35.24 Aligned_cols=40 Identities=18% Similarity=0.228 Sum_probs=29.5
Q ss_pred CCCCCEEEeccccccCC-----CccchHHHHHHHHHHHHHHHHHh
Q 014807 336 TSFPNLFMAGDWITTRH-----GSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~-----g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
++++|||-||+-...-+ +..++-.|+..|++|++.+.+..
T Consensus 525 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~vfGr~Ag~~aa~~~ 569 (572)
T 1d4d_A 525 KPITGLYAAGEVTGGVHGANRLGGNAISDIVTYGRIAGASAAKFA 569 (572)
T ss_dssp SEEEEEEECSTTEESTTTTSCCTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCeeECeecccCCCCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 68999999999852111 11356789999999999987654
No 314
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=31.71 E-value=37 Score=34.52 Aligned_cols=42 Identities=24% Similarity=0.293 Sum_probs=30.2
Q ss_pred CCCCCCCEEEecccccc-CCC-----ccchHHHHHHHHHHHHHHHHHh
Q 014807 334 GFTSFPNLFMAGDWITT-RHG-----SWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~-~~g-----~~~~egAi~SG~~aA~~Il~~~ 375 (418)
.+++++|||-||+...+ -+| ..++-.|+..|++|++.+.+..
T Consensus 381 ~~v~IpGLYAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~ 428 (660)
T 2bs2_A 381 GEAKLKGLFSAGEAACWDMHGFNRLGGNSVSEAVVAGMIVGEYFAEHC 428 (660)
T ss_dssp SBCSSBTEEECGGGEECCSSTTCCCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceecCCEEeccccccccccCCCCCchHHHHHHHHHHHHHHHHHHHHh
Confidence 34689999999996311 111 1346678999999999987765
No 315
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=31.66 E-value=24 Score=35.02 Aligned_cols=40 Identities=23% Similarity=0.284 Sum_probs=29.4
Q ss_pred CCCCCEEEeccccccCCC-----ccchHHHHHHHHHHHHHHHHHh
Q 014807 336 TSFPNLFMAGDWITTRHG-----SWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g-----~~~~egAi~SG~~aA~~Il~~~ 375 (418)
++++|||-||+-...-+| ..++-.|+..|++|++.+.+..
T Consensus 524 ~~I~GLyAaGe~~~g~~g~~~l~g~sl~~~~~fGr~Ag~~aa~~~ 568 (571)
T 1y0p_A 524 QVIPGLYGAGEVTGGVHGANRLGGNAISDIITFGRLAGEEAAKYS 568 (571)
T ss_dssp CEEEEEEECSTTEESSSTTSCCTTHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCcEeceEcCCCCcCCCCCchHhHHHHHHHHHHHHHHHHHHh
Confidence 689999999988531111 1346678999999999987654
No 316
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=31.27 E-value=41 Score=31.24 Aligned_cols=38 Identities=21% Similarity=0.081 Sum_probs=31.5
Q ss_pred CCEEEeccccccCCCc--cchHHHHHHHHHHHHHHHHHhC
Q 014807 339 PNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 339 ~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~~~~ 376 (418)
++++++||..+...|. .++.-|+++|..+|+.|...+.
T Consensus 286 ~rv~lvGDAAh~~~P~~GqG~~~al~da~~La~~L~~~~~ 325 (399)
T 2x3n_A 286 DNVAMLGDAIHNVHPITGQGMNLAIEDASALADALDLALR 325 (399)
T ss_dssp TTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEechhccCCCcccccHHHHHHHHHHHHHHHHhhhc
Confidence 7899999998754443 5788999999999999987764
No 317
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=31.13 E-value=51 Score=32.52 Aligned_cols=57 Identities=16% Similarity=0.131 Sum_probs=37.6
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC----CCccccccCCCCChh
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD----GSFSKIIPVEEDEPH 392 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~----~~~~~~~~~~~~~~~ 392 (418)
.+|.++|+|-+||-+ .+.+. ....|...|+.||+.++..-.. ..-.+++...|.-+.
T Consensus 346 ~~Ts~p~IyAiGDv~-~~~p~-La~~A~~eg~~aa~~i~g~~~~~~d~~~iP~~vft~PeiA~ 406 (542)
T 4b1b_A 346 SCTNIPSIFAVGDVA-ENVPE-LAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGA 406 (542)
T ss_dssp SBCSSTTEEECTTSB-TTCCC-CHHHHHHHHHHHHHHHHSCCCCCCCCSSCCEEECSSSCEEE
T ss_pred ccccCCCeEEecccc-CCchh-HHHHHHHHHHHHHHHHhcCCCcccCCCCCceEEeCCCCeEE
Confidence 358899999999995 23343 5677889999999999864322 111245555554443
No 318
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=29.87 E-value=23 Score=36.14 Aligned_cols=37 Identities=16% Similarity=0.028 Sum_probs=29.9
Q ss_pred CCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 336 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
+..+|+|.+||.. .. ..+..|+..|..||..|...+.
T Consensus 639 t~~~~VyaiGD~~--~~--~~~~~A~~~g~~aa~~i~~~l~ 675 (690)
T 3k30_A 639 GEIASVRGIGDAW--AP--GTIAAAVWSGRRAAEEFDAVLP 675 (690)
T ss_dssp TSCSEEEECGGGT--SC--BCHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCCCEEEEeCCC--ch--hhHHHHHHHHHHHHHHHHhhcc
Confidence 4578999999994 34 3566699999999999988764
No 319
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=29.75 E-value=49 Score=33.42 Aligned_cols=40 Identities=25% Similarity=0.334 Sum_probs=26.1
Q ss_pred CCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHh
Q 014807 335 FTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 335 ~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~ 375 (418)
.++++|||-||+...++.. ...-+++..|+.|++.+.+.+
T Consensus 428 ~t~I~GLyAaGe~a~~~~~-r~~~~sl~~G~~ag~~aa~~~ 467 (643)
T 1jnr_A 428 MTTVKGLFAIGDCAGANPH-KFSSGSFTEGRIAAKAAVRFI 467 (643)
T ss_dssp BCSSBTEEECGGGBCSCCC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred CceeCCEEeeecccccccc-ccchhHHHHHHHHHHHHHHHH
Confidence 4789999999998532111 222356777777777766554
No 320
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=29.33 E-value=45 Score=30.89 Aligned_cols=46 Identities=17% Similarity=0.084 Sum_probs=37.1
Q ss_pred hhHHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhhH
Q 014807 137 KIFEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGISTL 195 (418)
Q Consensus 137 ~l~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~~ 195 (418)
.|.+.|.+.+++.|++|+++++|++|... . ++.||.||.|......
T Consensus 99 ~l~~~L~~~~~~~gv~i~~~~~v~~i~~~---~----------~~~ad~vV~AdG~~S~ 144 (381)
T 3c4a_A 99 GLVHALRDKCRSQGIAIRFESPLLEHGEL---P----------LADYDLVVLANGVNHK 144 (381)
T ss_dssp HHHHHHHHHHHHTTCEEETTCCCCSGGGC---C----------GGGCSEEEECCGGGGG
T ss_pred HHHHHHHHHHHHCCCEEEeCCEeccchhc---c----------cccCCEEEECCCCCch
Confidence 47788888888889999999999988531 1 2579999999998765
No 321
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=28.42 E-value=26 Score=34.22 Aligned_cols=38 Identities=21% Similarity=0.201 Sum_probs=27.5
Q ss_pred CCCCCEEEeccccccCC-----CccchHHHHHHHHHHHHHHHH
Q 014807 336 TSFPNLFMAGDWITTRH-----GSWSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~-----g~~~~egAi~SG~~aA~~Il~ 373 (418)
++++|||-||+-+..-+ +..++-.|+.+|++|++.+.+
T Consensus 466 ~~I~GLyAaGe~~gg~~g~~y~~G~sl~~~~~fGr~Ag~~aa~ 508 (510)
T 4at0_A 466 EPIPGLFAAGRCTSGVCAGGYASGTSLGDGSFYGRRAGISAAK 508 (510)
T ss_dssp SEEEEEEECGGGBCCSCSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred CCcCCeeeceecccCCCcCCCCcHHhHHHHHHHHHHHHHHHHh
Confidence 68999999999742111 113467899999999998753
No 322
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=28.30 E-value=23 Score=32.92 Aligned_cols=35 Identities=17% Similarity=0.165 Sum_probs=29.1
Q ss_pred CCEEEeccccccCCCc--cchHHHHHHHHHHHHHHHH
Q 014807 339 PNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 339 ~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~ 373 (418)
+++.++||..++.+|. .++.-|+++|...|+.|..
T Consensus 262 grv~LvGDAAh~~~P~~GqG~~~al~Da~~La~~L~~ 298 (381)
T 3c4a_A 262 GKLVLLGDALQSGHFSIGHGTTMAVVVAQLLVKALCT 298 (381)
T ss_dssp TTEEECGGGTCCCCGGGCCHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEccccccCCCccccHHHHHHHHHHHHHHHhc
Confidence 6899999998765554 5788899999999998865
No 323
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=28.20 E-value=44 Score=31.31 Aligned_cols=35 Identities=14% Similarity=0.142 Sum_probs=29.0
Q ss_pred CCEEEeccccccCCCc--cchHHHHHHHHHHHHHHHH
Q 014807 339 PNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 339 ~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~ 373 (418)
++++++||..+...|. .++.-|+++|...|+.|..
T Consensus 303 grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 339 (410)
T 3c96_A 303 GRITLLGDAAHLMYPMGANGASQAILDGIELAAALAR 339 (410)
T ss_dssp TTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhc
Confidence 6899999998765554 5788899999999998865
No 324
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=27.68 E-value=56 Score=32.86 Aligned_cols=41 Identities=22% Similarity=0.263 Sum_probs=30.8
Q ss_pred CCCCCEEEecccccc-CC-----CccchHHHHHHHHHHHHHHHHHhC
Q 014807 336 TSFPNLFMAGDWITT-RH-----GSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 336 ~~~~~l~laGd~~~~-~~-----g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
++++|||-||+...+ -+ +..++-.|+..|++|++.+.+...
T Consensus 387 t~IpGLyAaGE~a~~g~hGanrlggnsL~~~~vfGr~Ag~~aa~~~~ 433 (621)
T 2h88_A 387 KVVPGLYACGEAASASVHGANRLGANSLLDLVVFGRACALTIAETCK 433 (621)
T ss_dssp EEEEEEEECGGGEECSSSTTSCCTTSHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccCceEEccccccccccCCCCCchHhHHHHHHHHHHHHHHHHHhhh
Confidence 579999999996421 11 224577899999999999988764
No 325
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=26.44 E-value=50 Score=33.53 Aligned_cols=42 Identities=14% Similarity=0.121 Sum_probs=27.3
Q ss_pred CCCCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 334 GFTSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 334 ~~~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
..|.++|||-|||....+.. +....++..|+.|+..+.+.+.
T Consensus 448 ~~t~v~gl~a~Ge~~~~~~h-g~~~~sl~~g~~ag~~a~~~~~ 489 (662)
T 3gyx_A 448 RMTTVEGLWTCADGVGASGH-KFSSGSHAEGRIVGKQMVRWYL 489 (662)
T ss_dssp TBCSSBTEECCSSSBCSCCC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccCCeEeCccccccccC-ccHhHHHHHHHHHHHHHHHHHh
Confidence 45889999999998421211 2245566667777777666553
No 326
>4fay_A Microcompartments protein; BMC domain, shell protein, glycerol-binding protein; 1.56A {Lactobacillus reuteri}
Probab=26.39 E-value=86 Score=27.40 Aligned_cols=37 Identities=27% Similarity=0.397 Sum_probs=29.8
Q ss_pred CCCCCCC---EEEeccccccCCCccchHHHHHHHHHHHHHHHHHhCC
Q 014807 334 GFTSFPN---LFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLGD 377 (418)
Q Consensus 334 ~~~~~~~---l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~~ 377 (418)
..+.+.| +.|.||. +.++.|+..++.++.+++..+|.
T Consensus 208 ~gt~~ggk~~~~lTGd~-------sAVkaAv~A~~~~g~~ll~~~g~ 247 (258)
T 4fay_A 208 HGTSFSNEGCLTITGDS-------GAVRQAVMAGREVGLKLLSQFGE 247 (258)
T ss_dssp BSSSSCSCEEEEEESCH-------HHHHHHHHHHHHHHHHHHHTTSS
T ss_pred CCccccceEEEEEEeCH-------HHHHHHHHHHHHHHHHHHHHcCC
Confidence 3455555 7889988 57888999999999999999985
No 327
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=26.37 E-value=42 Score=31.24 Aligned_cols=34 Identities=18% Similarity=0.128 Sum_probs=28.5
Q ss_pred CEEEeccccccCCCc--cchHHHHHHHHHHHHHHHH
Q 014807 340 NLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 340 ~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~ 373 (418)
+++++||..+...|. .+++-|+++|...|+.|..
T Consensus 315 rv~LiGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~ 350 (398)
T 2xdo_A 315 PITMIGDAAHLMPPFAGQGVNSGLVDALILSDNLAD 350 (398)
T ss_dssp CEEECTHHHHCCCCTTSCSHHHHHHHHHHHHHHHHS
T ss_pred cEEEEeehhccCCCccCccHHHHHHHHHHHHHHHHh
Confidence 899999998765554 5789999999999998865
No 328
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=26.25 E-value=54 Score=30.46 Aligned_cols=35 Identities=11% Similarity=0.055 Sum_probs=28.1
Q ss_pred CCEEEeccccccCCCc--cchHHHHHHHHHHHHHHHH
Q 014807 339 PNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVVD 373 (418)
Q Consensus 339 ~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il~ 373 (418)
++++++||..+..+|. .+++-|+++|...|+.|..
T Consensus 299 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~ 335 (397)
T 2vou_A 299 GRVLLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTK 335 (397)
T ss_dssp TTEEECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEeccccccCCcchhhHHHHHHHHHHHHHHHhc
Confidence 6899999998865554 5788899999988887753
No 329
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=25.70 E-value=68 Score=31.08 Aligned_cols=49 Identities=14% Similarity=0.212 Sum_probs=25.5
Q ss_pred HHHHHHHHHhcCcEEEcCceeeEEEecCCCCeEEEEEE------------CCeEEecCEEEEccChh
Q 014807 139 FEPWMDSMRTRGCEFLDGRRVTDFIYDEERCCISDVVC------------GKETYSAGAVVLAVGIS 193 (418)
Q Consensus 139 ~~~l~~~l~~~G~~I~l~t~V~~I~~~~~~g~v~~v~~------------~g~~~~ad~VV~A~p~~ 193 (418)
.+.+.+.+++.|++++.++.+ .|. . +++. +.. +++++.+|+||+|+...
T Consensus 92 ~~~~~~~~~~~gv~~~~g~~~-~id--~--~~v~-v~~~~~~~~~~~~~~~~~~~~~d~lViAtGs~ 152 (500)
T 1onf_A 92 NNIYRQNLSKDKVDLYEGTAS-FLS--E--NRIL-IKGTKDNNNKDNGPLNEEILEGRNILIAVGNK 152 (500)
T ss_dssp HHHHHHHHHHTTCEEEESCCC-CC-------------------------------CBSSEEECCCCC
T ss_pred HHHHHHHHHhCCCEEEEeEEE-Eee--C--CEEE-EEeccccccccccCCCceEEEeCEEEECCCCC
Confidence 334445566789999998753 232 2 2232 221 14578999999999863
No 330
>1pzq_A Erythronolide synthase; four helix bundle, homodimer, transferase; NMR {Saccharopolyspora erythraea} SCOP: a.34.3.1
Probab=25.28 E-value=46 Score=20.60 Aligned_cols=18 Identities=39% Similarity=0.613 Sum_probs=14.0
Q ss_pred HHHHHHHHHhhhhcCCCC
Q 014807 396 LRTVNRRFNEIRAQLPLS 413 (418)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~ 413 (418)
+-.+.++|+++|+.-|-.
T Consensus 37 lesllrrwnsrradapst 54 (60)
T 1pzq_A 37 LESLLRRWNSRRADAPST 54 (60)
T ss_dssp HHHHHHHHHHHHHCSCCS
T ss_pred HHHHHHHHhhcccCCCcc
Confidence 456788999999988743
No 331
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=24.64 E-value=63 Score=31.71 Aligned_cols=44 Identities=14% Similarity=0.244 Sum_probs=30.5
Q ss_pred HHHHhcCcEEE--cCceeeEEEecCCCCeEEEEEECCeEEecCEEEEccChhh
Q 014807 144 DSMRTRGCEFL--DGRRVTDFIYDEERCCISDVVCGKETYSAGAVVLAVGIST 194 (418)
Q Consensus 144 ~~l~~~G~~I~--l~t~V~~I~~~~~~g~v~~v~~~g~~~~ad~VV~A~p~~~ 194 (418)
+.+.+.++++. .+++|++|.. + | |+++++++++|.||+|+....
T Consensus 346 ~~~~~~~v~lv~~~~~~i~~i~~-~--g----v~~~d~~~~~D~ii~atG~~~ 391 (542)
T 1w4x_A 346 EMFNRDNVHLVDTLSAPIETITP-R--G----VRTSEREYELDSLVLATGFDA 391 (542)
T ss_dssp HHTTSTTEEEEETTTSCEEEECS-S--E----EEESSCEEECSEEEECCCCCC
T ss_pred HHhCCCCEEEEecCCCCceEEcC-C--e----EEeCCeEEecCEEEEcCCccc
Confidence 34445556665 4778998852 1 3 445337899999999999876
No 332
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=24.61 E-value=74 Score=30.94 Aligned_cols=37 Identities=14% Similarity=-0.018 Sum_probs=29.5
Q ss_pred CCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHH
Q 014807 337 SFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 337 ~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~ 374 (418)
..+|+|-+||......+ .+-..|.+.|..+|+.|...
T Consensus 363 ~~~~IfAiGD~a~~~~p-~~a~~A~qqg~~~A~ni~~~ 399 (502)
T 4g6h_A 363 GSNNIFAIGDNAFAGLP-PTAQVAHQEAEYLAKNFDKM 399 (502)
T ss_dssp TCSSEEECGGGEESSSC-CCHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcccCCCCC-CchHHHHHHHHHHHHHHHHH
Confidence 67999999998543333 46788999999999998654
No 333
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=23.89 E-value=67 Score=30.37 Aligned_cols=37 Identities=8% Similarity=-0.005 Sum_probs=28.5
Q ss_pred CCCEEE-eccccccCCCc--cchHHHHHHHHHHHHHHHHH
Q 014807 338 FPNLFM-AGDWITTRHGS--WSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 338 ~~~l~l-aGd~~~~~~g~--~~~egAi~SG~~aA~~Il~~ 374 (418)
.+++.+ +||..+...+. .++.-|++++...|+.|...
T Consensus 306 ~~~~~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~ 345 (430)
T 3ihm_A 306 NGKTIIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH 345 (430)
T ss_dssp TSCEEEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc
Confidence 356777 99998754444 57888999999999888753
No 334
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=22.56 E-value=42 Score=30.96 Aligned_cols=34 Identities=9% Similarity=0.076 Sum_probs=27.1
Q ss_pred CCEEEeccccccCCCc--cchHHHHHHHHHHHHHHH
Q 014807 339 PNLFMAGDWITTRHGS--WSQERSYVTGLEAANRVV 372 (418)
Q Consensus 339 ~~l~laGd~~~~~~g~--~~~egAi~SG~~aA~~Il 372 (418)
++++++||..+...|. .++.-|+++|..+|+.|.
T Consensus 281 ~rv~lvGDAAh~~~P~~GqG~~~ai~da~~La~~L~ 316 (379)
T 3alj_A 281 GKVALVGDAAHAMCPALAQGAGCAMVNAFSLSQDLE 316 (379)
T ss_dssp TTEEECTHHHHCCCGGGSCHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEEcccCCCCcchhhhHHHHHHHHHHHHHHhc
Confidence 6899999998755544 568889999998888764
No 335
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=22.28 E-value=34 Score=35.21 Aligned_cols=37 Identities=14% Similarity=0.149 Sum_probs=29.5
Q ss_pred CCCCCEEEeccccccCCCccchHHHHHHHHHHHHHHHHHhC
Q 014807 336 TSFPNLFMAGDWITTRHGSWSQERSYVTGLEAANRVVDYLG 376 (418)
Q Consensus 336 ~~~~~l~laGd~~~~~~g~~~~egAi~SG~~aA~~Il~~~~ 376 (418)
+..+|+|.+||.. .. ..+..|+..|..||..|...+.
T Consensus 664 t~~~~VyAiGD~~--~~--~~~~~A~~~G~~aA~~i~~~l~ 700 (729)
T 1o94_A 664 NDIKGIYLIGDAE--AP--RLIADATFTGHRVAREIEEANP 700 (729)
T ss_dssp GTCCEEEECGGGT--SC--CCHHHHHHHHHHHHHTTTSSCT
T ss_pred cCCCCeEEEeCcc--ch--hhHHHHHHHHHHHHHHhhhhcc
Confidence 5678999999984 33 3567799999999999976653
No 336
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=21.75 E-value=43 Score=30.63 Aligned_cols=73 Identities=15% Similarity=0.106 Sum_probs=43.2
Q ss_pred HHHHHHHHHHhhhhcCCCCceeeeeeEEEcCCCccccCCCCCCCCCCC--CCCCCCEEEeccccccCCCccchHHHHHHH
Q 014807 287 QVVAKAVSYLSKCIKDFSTATVMDHKIRRFPKSLTHFFPGSYKYMMRG--FTSFPNLFMAGDWITTRHGSWSQERSYVTG 364 (418)
Q Consensus 287 el~~~~~~~L~~~~p~~~~~~~~~~~v~r~~~a~~~~~pg~~~~r~~~--~~~~~~l~laGd~~~~~~g~~~~egAi~SG 364 (418)
+..+.+++.+.+++|.+. .+. ..| ......+|... |.. ....+|+|++.-+ .++|+ --|..+|
T Consensus 283 ~~~~~l~~~~~~~~P~l~--~~~----~~~-~g~r~~t~d~~---p~ig~~~~~~~l~~~~G~--~g~G~---~~ap~~g 347 (372)
T 2uzz_A 283 SDGSEAFPFLRNVLPGIG--CCL----YGA-ACTYDNSPDED---FIIDTLPGHDNTLLITGL--SGHGF---KFASVLG 347 (372)
T ss_dssp TGGGSSHHHHHHHSCSCC--CEE----EEC-CCEEEECTTSC---CCEEEETTEEEEEEECCC--CSCCG---GGHHHHH
T ss_pred HHHHHHHHHHHHHCCCCC--ccc----eee-EEeeccCCCCC---eEEecCCCCCCEEEEeCC--Cccch---hccHHHH
Confidence 345667888999999875 232 224 22222233322 211 1235799998777 55654 3467788
Q ss_pred HHHHHHHHHH
Q 014807 365 LEAANRVVDY 374 (418)
Q Consensus 365 ~~aA~~Il~~ 374 (418)
+.+|+.|+..
T Consensus 348 ~~la~~i~~~ 357 (372)
T 2uzz_A 348 EIAADFAQDK 357 (372)
T ss_dssp HHHHHHHTTC
T ss_pred HHHHHHHhCC
Confidence 8888888643
No 337
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=20.72 E-value=41 Score=32.45 Aligned_cols=42 Identities=24% Similarity=0.238 Sum_probs=28.2
Q ss_pred CCCCCCCCEEEeccccccCC------CccchHHHHHHHHHHHHHHHHH
Q 014807 333 RGFTSFPNLFMAGDWITTRH------GSWSQERSYVTGLEAANRVVDY 374 (418)
Q Consensus 333 ~~~~~~~~l~laGd~~~~~~------g~~~~egAi~SG~~aA~~Il~~ 374 (418)
..+++++|||-|||...++. +..++..|+..|+.|++.+.+.
T Consensus 324 ~~~t~ipgLyAaGd~a~~~~hg~~rl~~~sl~~~~v~G~~a~~~~a~~ 371 (472)
T 2e5v_A 324 RGESNIVNLYAIGEVSDSGLHGANRLASNSLLEGLVFGINLPRYVDSS 371 (472)
T ss_dssp TCBCSSBTEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHGGGTTTSC
T ss_pred CCccccCCEEecchhcccccCCCCCCCcccHHHHHHHHHHHHHHHHhh
Confidence 34578999999999864222 1124566777788888777543
No 338
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=20.41 E-value=40 Score=33.66 Aligned_cols=39 Identities=26% Similarity=0.304 Sum_probs=28.1
Q ss_pred CCCCEEEecccccc-CCC-----ccchHHHHHHHHHHHHHHHHHh
Q 014807 337 SFPNLFMAGDWITT-RHG-----SWSQERSYVTGLEAANRVVDYL 375 (418)
Q Consensus 337 ~~~~l~laGd~~~~-~~g-----~~~~egAi~SG~~aA~~Il~~~ 375 (418)
+++|||-||+...+ -+| ..++-.|+..|++|++.+.+..
T Consensus 379 ~I~GLyAaGe~a~~g~hG~nrl~gnsl~~~~vfG~~Ag~~aa~~~ 423 (588)
T 2wdq_A 379 VVPGLFAVGEIACVSVHGANRLGGNSLLDLVVFGRAAGLHLQESI 423 (588)
T ss_dssp EEEEEEECGGGEECSSSTTSCCTTHHHHHHHHHHHHHHHTHHHHH
T ss_pred eeCCceeCccccccCCCCCCCCcchhHHHHHHHHHHHHHHHHHhh
Confidence 79999999996321 111 1346779999999999887654
Done!