Your job contains 1 sequence.
>014809
MPTNEGFSGVSNCYVFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDS
LPGFFNRKAAEQSAAEVALVELAKLGKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLY
QCRKDEASGKVQFSCTVEIGDIRYIGGAAKTKKEAEIKAARTALLAIQSSASELSGNSAG
NTQLTVLPSRKRGPEVANNPEETVNVPKAKKGRFKKKILKMKRPGGRMDRTQLQNTGNME
NINASQEGSKVSQANTSGIQGVSTEVLAVEGTMDCQEGRSEIEPIEREMPAVNDALPHHI
GGDSETIHSAATHCSDRSSNEASEMGTSSLAKEVNEVTPGVGTSSVSCHTTALAKEVNEG
TPNEGTSTALTEEVNEPSGIMEAASMTNNSTLGQIESSCVIPGINQPEERIQAGTSQA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014809
(418 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2024407 - symbol:HYL1 "HYPONASTIC LEAVES 1" sp... 624 5.5e-61 1
UNIPROTKB|Q0IQN6 - symbol:DRB8 "Double-stranded RNA-bindi... 500 7.7e-48 1
TAIR|locus:2057491 - symbol:DRB2 "dsRNA-binding protein 2... 152 1.2e-08 2
TAIR|locus:2829928 - symbol:DRB3 "dsRNA-binding protein 3... 151 6.0e-08 1
TAIR|locus:2163016 - symbol:DRB5 "dsRNA-binding protein 5... 151 1.1e-07 2
TAIR|locus:2081620 - symbol:DRB4 "double-stranded-RNA-bin... 125 5.6e-05 2
>TAIR|locus:2024407 [details] [associations]
symbol:HYL1 "HYPONASTIC LEAVES 1" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0009733
"response to auxin stimulus" evidence=IMP] [GO:0009735 "response to
cytokinin stimulus" evidence=IMP] [GO:0009737 "response to abscisic
acid stimulus" evidence=IMP] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA;IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0035279 "mRNA cleavage involved
in gene silencing by miRNA" evidence=IMP] [GO:0031054 "pre-miRNA
processing" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA;IMP] [GO:0015030 "Cajal
body" evidence=IDA] [GO:0035198 "miRNA binding" evidence=IDA]
[GO:0010445 "nuclear dicing body" evidence=IDA] [GO:0051607
"defense response to virus" evidence=RCA] [GO:0010305 "leaf
vascular tissue pattern formation" evidence=IMP] [GO:0010589 "leaf
proximal/distal pattern formation" evidence=IMP] InterPro:IPR001159
Pfam:PF00035 PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0009737 GO:GO:0009735
GO:GO:0009733 Gene3D:3.30.160.20 GO:GO:0003725 GO:GO:0035198
GO:GO:0035279 GO:GO:0031054 GO:GO:0010267 GO:GO:0010305
EMBL:AC000132 EMBL:AF276440 EMBL:AY054631 EMBL:AY081525
EMBL:AK319123 IPI:IPI00525041 IPI:IPI00975255 PIR:H86230
RefSeq:NP_563850.1 UniGene:At.10223 PDB:2L2M PDB:2L2N PDB:3ADG
PDB:3ADI PDB:3ADJ PDBsum:2L2M PDBsum:2L2N PDBsum:3ADG PDBsum:3ADI
PDBsum:3ADJ ProteinModelPortal:O04492 SMR:O04492 DIP:DIP-33453N
IntAct:O04492 STRING:O04492 PaxDb:O04492 PRIDE:O04492
EnsemblPlants:AT1G09700.1 GeneID:837498 KEGG:ath:AT1G09700
TAIR:At1g09700 eggNOG:NOG237225 InParanoid:O04492 OMA:CMNGLKE
ProtClustDB:CLSN2916994 EvolutionaryTrace:O04492
Genevestigator:O04492 GO:GO:0010445 GO:GO:0010589 Uniprot:O04492
Length = 419
Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
Identities = 168/419 (40%), Positives = 220/419 (52%)
Query: 1 MPTNEGFSGVSNCYVFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDS 60
M + + SGVSNCYVFKSRLQEYAQK +PTPVYE +KEGPSH+ F+STVI+D VRY+S
Sbjct: 1 MTSTDVSSGVSNCYVFKSRLQEYAQKYKLPTPVYEIVKEGPSHKSLFQSTVILDGVRYNS 60
Query: 61 LPGFFNRXXXXXXXXXXXXXXXXXXGKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLY 120
LPGFFNR ++++C+SQP+HETGLCKNLLQEYAQKMNYAIPLY
Sbjct: 61 LPGFFNRKAAEQSAAEVALRELAKSSELSQCVSQPVHETGLCKNLLQEYAQKMNYAIPLY 120
Query: 121 QCRKDEASGKV-QFSCTVEIGDIRYXXXXXXXXXXXXXXXXXXXLLAIQSSASELSGNSA 179
QC+K E G+V QF+CTVEIG I+Y LLAIQS N
Sbjct: 121 QCQKVETLGRVTQFTCTVEIGGIKYTGAATRTKKDAEISAGRTALLAIQSDTKNNLANY- 179
Query: 180 GNTQLTVLPSRKRGPEVANNPEETVNVPKAKKGRFKKKILKMKRPGGRMDRTQL---QNT 236
NTQLTVLP K+ + A +ETV KA+K +FKKK K KR + + Q T
Sbjct: 180 -NTQLTVLPCEKKTIQAAIPLKETVKTLKARKAQFKKKAQKGKRTVAKNPEDIIIPPQPT 238
Query: 237 GNMENINASQEGSKVSQANTSGIQGVSTEVLAVEGTMDCQEGRSEIEPIEREMPAVNDAL 296
+ +N + + + + +S + G+ A G+++ + + E P E P+ + L
Sbjct: 239 DHCQNDQSEKIETTPNLEPSSCMNGLKE---AAFGSVETE--KIETTP-NLEPPSCMNGL 292
Query: 297 PHHIGGDSETIHSAATHCSDRSS--NEASEMGTSSLAKEVNEVTPGVGTSSVSCHTTALA 354
G ET T + S N E S+ E E TP + SS C L
Sbjct: 293 KEAAFGSVETEKIETTPNLEPPSCMNGLKEAAFGSVETEKIETTPNLEPSS--C-MNGL- 348
Query: 355 KEVNEGTPNEGTSTALTEEVNEPS---GIMEAA--SMTNNS--TLGQIESSCVIPGINQ 406
KE G+ E T + PS G+ EAA S+ T +ESS + G+ +
Sbjct: 349 KEAAFGSV-ETEKIETTPNLEPPSCMNGLKEAAFGSVETEKIETTPNLESSSCMSGLKE 406
>UNIPROTKB|Q0IQN6 [details] [associations]
symbol:DRB8 "Double-stranded RNA-binding protein 8"
species:39947 "Oryza sativa Japonica Group" [GO:0003725
"double-stranded RNA binding" evidence=IDA] InterPro:IPR001159
InterPro:IPR011907 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725
GO:GO:0016075 EMBL:AP008218 GO:GO:0004525 EMBL:AB036988
EMBL:DQ009988 RefSeq:NP_001065960.1 UniGene:Os.3740
EnsemblPlants:LOC_Os12g01916.1 GeneID:4351288
KEGG:dosa:Os12t0109900-02 KEGG:osa:4351288 Gramene:Q0IQN6
HOGENOM:HOG000119022 OMA:TPKPLKV ProtClustDB:CLSN2695502
PANTHER:PTHR11207 Uniprot:Q0IQN6
Length = 424
Score = 500 (181.1 bits), Expect = 7.7e-48, P = 7.7e-48
Identities = 116/254 (45%), Positives = 141/254 (55%)
Query: 10 VSNCYVFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRXX 69
V NCYVFKSRLQEYAQK G+ TP Y T KEGPSHEP F+STV++++ YDSLPGFFNR
Sbjct: 28 VENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPSHEPVFKSTVVINNTSYDSLPGFFNRKA 87
Query: 70 XXXXXXXXXXXXXXXXGKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLYQCRKDEASG 129
N I + ETGLCKNLLQEYAQKMNYAIP Y C K ASG
Sbjct: 88 AEQSAAEVALMEIVKSIPANANIPA-VQETGLCKNLLQEYAQKMNYAIPSYICTKS-ASG 145
Query: 130 KVQFSCTVEIGDIRYXXXXXXXXXXXXXXXXXXXLLAIQSSASELSGNSAGNTQLTVLPS 189
F CTVEIG I+Y LLAIQ SE S N A T+ V+P
Sbjct: 146 LAPFICTVEIGGIQYIGAAARTKKDAEIKAARTALLAIQGQ-SEGSANGA--TKYIVVPG 202
Query: 190 RKRGPEVANNPEETVNVPKAKKGRFKKKILK---MKRPGGRMD--RTQLQNTGNMENINA 244
++ G EV P ET K KKG FKKK K MK+ G +D + + + G+ + +
Sbjct: 203 KRVGKEVEKRPIETPKPLKVKKGGFKKKWNKRKFMKKDGQAVDVEKDEARVAGDAHDSDV 262
Query: 245 SQEGSKVSQANTSG 258
+ + ++Q + G
Sbjct: 263 LMQPTVITQEASCG 276
>TAIR|locus:2057491 [details] [associations]
symbol:DRB2 "dsRNA-binding protein 2" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0010267 "production of ta-siRNAs
involved in RNA interference" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] InterPro:IPR001159 Pfam:PF00035
PROSITE:PS50137 SMART:SM00358 InterPro:IPR014720 GO:GO:0005737
EMBL:CP002685 GenomeReviews:CT485783_GR Gene3D:3.30.160.20
GO:GO:0003725 EMBL:AC006283 GO:GO:0035196 EMBL:AY034976
EMBL:AY062965 IPI:IPI00547657 PIR:B84684 RefSeq:NP_565672.1
UniGene:At.13732 ProteinModelPortal:Q9SKN2 SMR:Q9SKN2 IntAct:Q9SKN2
STRING:Q9SKN2 PRIDE:Q9SKN2 EnsemblPlants:AT2G28380.1 GeneID:817386
KEGG:ath:AT2G28380 TAIR:At2g28380 eggNOG:NOG291691
HOGENOM:HOG000243232 InParanoid:Q9SKN2 OMA:PCHSMAP PhylomeDB:Q9SKN2
ProtClustDB:CLSN2688512 Genevestigator:Q9SKN2 GO:GO:0070919
Uniprot:Q9SKN2
Length = 434
Score = 152 (58.6 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 38/131 (29%), Positives = 65/131 (49%)
Query: 15 VFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRXXXXXXX 74
++K++LQE AQ++ P Y I+EGP H P F++TV + ++S P + +
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFES-PQYCSTLRQAEHS 59
Query: 75 XXXXXXXXXXX-GKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLYQCRKDEASGKVQF 133
G + ++ + ETG+ KNLLQE AQ++ +P Y + + F
Sbjct: 60 AAEVALNALSNRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPRYTTFRSGLGHQPVF 119
Query: 134 SCTVEIGDIRY 144
+ TVE+ I +
Sbjct: 120 TGTVELAGITF 130
Score = 48 (22.0 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 19/70 (27%), Positives = 35/70 (50%)
Query: 268 AVEGTMDCQEGR-SEIEPIEREMPAVNDALPHHIGGDSETI---HSAATHCSDRSSNEAS 323
AV+ T++ E R S ++ E +P + D+L + G + TI A+ ++R+ + S
Sbjct: 359 AVKPTVEAGETRISSVQEKE-SIPVLPDSLEIGVEGSTITITDCEKTASKETERAEFKDS 417
Query: 324 EMGTSSLAKE 333
G A+E
Sbjct: 418 SKGEPETARE 427
>TAIR|locus:2829928 [details] [associations]
symbol:DRB3 "dsRNA-binding protein 3" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS]
[GO:0005622 "intracellular" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0035196
"production of miRNAs involved in gene silencing by miRNA"
evidence=RCA] [GO:0051607 "defense response to virus" evidence=RCA]
InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137 SMART:SM00358
InterPro:IPR014720 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:3.30.160.20 GO:GO:0005622 GO:GO:0003725 HOGENOM:HOG000243232
EMBL:BT012284 EMBL:AP000602 EMBL:AK222128 IPI:IPI00525256
RefSeq:NP_001030779.2 RefSeq:NP_189329.3 UniGene:At.37133
ProteinModelPortal:Q9LJF5 SMR:Q9LJF5 STRING:Q9LJF5
EnsemblPlants:AT3G26932.1 EnsemblPlants:AT3G26932.2 GeneID:822310
KEGG:ath:AT3G26932 TAIR:At3g26932 eggNOG:NOG246955
InParanoid:Q2V3S2 OMA:SSVERNC PhylomeDB:Q9LJF5
ProtClustDB:CLSN2680394 Genevestigator:Q9LJF5 Uniprot:Q9LJF5
Length = 359
Score = 151 (58.2 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 15 VFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRXXXXXXX 74
++K++LQE AQ++ P Y +EGP H P F+++V + ++S P + +
Sbjct: 1 MYKNQLQELAQRSCFSLPSYTCTREGPDHAPRFKASVNFNGEIFES-PTYCSTLRQAEHS 59
Query: 75 XXXXXXXXXXX-GKVNECISQPIHETGLCKNLLQEYAQKMNYAIPLYQCRKDEASGKVQF 133
G ++ + ETG+ KNLLQE A + +P+Y + F
Sbjct: 60 AAEVALSALSSKGPSKSLTARVLDETGIYKNLLQETAHRAGLDLPVYTSVRSGPGHIPTF 119
Query: 134 SCTVEIGDIRY 144
SCTVE+ + +
Sbjct: 120 SCTVELAGMSF 130
>TAIR|locus:2163016 [details] [associations]
symbol:DRB5 "dsRNA-binding protein 5" species:3702
"Arabidopsis thaliana" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0003725 "double-stranded RNA binding" evidence=IEA;ISS;IDA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0005515 "protein binding" evidence=IPI] [GO:0010267 "production
of ta-siRNAs involved in RNA interference" evidence=RCA]
[GO:0035196 "production of miRNAs involved in gene silencing by
miRNA" evidence=RCA] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:3.30.160.20 GO:GO:0005622
GO:GO:0003725 HOGENOM:HOG000243232 ProtClustDB:CLSN2680394
EMBL:AB010072 EMBL:AK117808 EMBL:BT009653 IPI:IPI00534111
RefSeq:NP_198923.2 UniGene:At.30254 ProteinModelPortal:Q8GY79
SMR:Q8GY79 IntAct:Q8GY79 STRING:Q8GY79 EnsemblPlants:AT5G41070.1
GeneID:834109 KEGG:ath:AT5G41070 TAIR:At5g41070 eggNOG:NOG295240
InParanoid:Q8GY79 OMA:LRWINLL PhylomeDB:Q8GY79
Genevestigator:Q8GY79 Uniprot:Q8GY79
Length = 393
Score = 151 (58.2 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 37/131 (28%), Positives = 65/131 (49%)
Query: 15 VFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRXXXXXXX 74
++K++LQE AQ++ P Y I+EGP H P F+++V + ++S P + +
Sbjct: 1 MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKASVNFNGEIFES-PTYCSTLRQAEHA 59
Query: 75 XXXXXXXXXXXGKVNECISQPI-HETGLCKNLLQEYAQKMNYAIPLYQCRKDEASGKVQF 133
++ ++ I ETG+ KNLLQE A + +P+Y + + F
Sbjct: 60 AAEVSLNVLSSRVPSKSLTAKILDETGIYKNLLQETAHRAGLDLPMYTSVRSGSCHFPGF 119
Query: 134 SCTVEIGDIRY 144
SCTVE+ + +
Sbjct: 120 SCTVELAGMTF 130
Score = 38 (18.4 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 325 MGTSSLAKEVNEVTPGVGTSSVSCHTTALAKEVNEGTPNE 364
+ SSL+ VNE T + SV +T L + + E
Sbjct: 338 LNPSSLSSSVNEFTSSNNSCSV-LNTPGLGGQEKKNLTRE 376
>TAIR|locus:2081620 [details] [associations]
symbol:DRB4 "double-stranded-RNA-binding protein 4"
species:3702 "Arabidopsis thaliana" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA;ISS;IDA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA;IMP] [GO:0060145 "viral gene silencing in virus
induced gene silencing" evidence=IMP] [GO:0035196 "production of
miRNAs involved in gene silencing by miRNA" evidence=RCA;IMP]
[GO:0070919 "production of siRNA involved in chromatin silencing by
small RNA" evidence=IMP] [GO:0051607 "defense response to virus"
evidence=RCA] InterPro:IPR001159 Pfam:PF00035 PROSITE:PS50137
SMART:SM00358 InterPro:IPR014720 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0019048 Gene3D:3.30.160.20
EMBL:AL162651 GO:GO:0003725 GO:GO:0010267 GO:GO:0035196
GO:GO:0070919 EMBL:AB455097 EMBL:AY074363 EMBL:AY150509
IPI:IPI00529941 IPI:IPI00914309 PIR:T48069 RefSeq:NP_001154686.1
RefSeq:NP_191839.2 RefSeq:NP_974480.1 UniGene:At.34049
ProteinModelPortal:Q8H1D4 SMR:Q8H1D4 IntAct:Q8H1D4 STRING:Q8H1D4
PaxDb:Q8H1D4 PRIDE:Q8H1D4 EnsemblPlants:AT3G62800.1
EnsemblPlants:AT3G62800.2 GeneID:825455 KEGG:ath:AT3G62800
TAIR:At3g62800 eggNOG:NOG306267 HOGENOM:HOG000072681
InParanoid:Q8H1D4 OMA:YANEREG PhylomeDB:Q8H1D4
ProtClustDB:CLSN2690620 Genevestigator:Q8H1D4 GO:GO:0060145
Uniprot:Q8H1D4
Length = 355
Score = 125 (49.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 52/203 (25%), Positives = 76/203 (37%)
Query: 14 YVFKSRLQEYAQKAGIPTPVYETIKEGPSHEPWFRSTVIVDDVRYDSLPGFFNRXXXXXX 73
+V+K +LQ YA + + PVY +EGP H P FR V + S FF
Sbjct: 3 HVYKGQLQAYALQHNLELPVYANEREGPPHAPRFRCNVTFCGQTFQSSE-FFP------- 54
Query: 74 XXXXXXXXXXXXGKVNECISQPIHETGL---CKNLLQEYAQKMNYAIPLYQCRKDEASGK 130
K+ P G+ KNLLQE AQK + +P Y S
Sbjct: 55 ---TLKSAEHAAAKIAVASLTPQSPEGIDVAYKNLLQEIAQKESSLLPFYATATSGPSHA 111
Query: 131 VQFSCTVEIGDIRYXXXXXXXXXXXXXXXXXXXLLAIQSSASELSGNSAGNTQLTVLPSR 190
F+ TVE + ++I++ GNS T LPS
Sbjct: 112 PTFTSTVEFAGKVFSGEEAKTKKLAEMSAAKVAFMSIKN------GNS-NQTGSPTLPSE 164
Query: 191 KR---GPEVANNPEETVNVPKAK 210
++ V ++P+E + P +K
Sbjct: 165 RQEDVNSNVKSSPQEIHSQPSSK 187
Score = 39 (18.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 354 AKEVN------EGTPNEGTSTALTEE 373
AKE+N E N+GT +ALT +
Sbjct: 217 AKEINVALNEPENPTNDGTLSALTTD 242
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.308 0.126 0.354 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 418 381 0.00090 117 3 11 23 0.37 35
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 6
No. of states in DFA: 609 (65 KB)
Total size of DFA: 224 KB (2122 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.36u 0.08s 32.44t Elapsed: 00:00:02
Total cpu time: 32.36u 0.08s 32.44t Elapsed: 00:00:02
Start: Mon May 20 19:25:20 2013 End: Mon May 20 19:25:22 2013