Your job contains 1 sequence.
>014817
MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRS
PLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGS
RLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMF
PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDE
IFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDA
ERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQ
RDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVPF
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 014817
(418 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2012136 - symbol:PUB26 "plant U-box 26" specie... 1296 3.4e-132 1
TAIR|locus:2090604 - symbol:PUB25 "plant U-box 25" specie... 1251 2.0e-127 1
TAIR|locus:2039265 - symbol:PUB23 "plant U-box 23" specie... 449 1.9e-42 1
TAIR|locus:2169861 - symbol:AT5G37490 species:3702 "Arabi... 447 3.2e-42 1
TAIR|locus:2013850 - symbol:CMPG1 ""CYS, MET, PRO, and GL... 366 1.2e-33 1
TAIR|locus:2097390 - symbol:AT3G49810 species:3702 "Arabi... 202 8.6e-29 2
TAIR|locus:2017719 - symbol:AT1G23030 species:3702 "Arabi... 324 1.8e-28 1
TAIR|locus:2079964 - symbol:PUB22 "plant U-box 22" specie... 315 3.1e-28 1
UNIPROTKB|Q5VRH9 - symbol:PUB12 "U-box domain-containing ... 308 9.8e-27 1
TAIR|locus:2075140 - symbol:PUB13 "plant U-box 13" specie... 307 1.6e-26 1
UNIPROTKB|Q0IMG9 - symbol:SPL11 "E3 ubiquitin-protein lig... 306 2.3e-26 1
TAIR|locus:2082682 - symbol:PUB14 "plant U-box 14" specie... 297 1.7e-25 1
TAIR|locus:2174814 - symbol:CMPG2 ""CYS, MET, PRO, and GL... 286 3.6e-25 1
TAIR|locus:2144846 - symbol:AT5G09800 species:3702 "Arabi... 279 2.0e-24 1
TAIR|locus:2162276 - symbol:PUB15 "Plant U-Box 15" specie... 287 2.3e-24 1
TAIR|locus:2013990 - symbol:AT1G71020 species:3702 "Arabi... 278 1.9e-23 1
TAIR|locus:2093974 - symbol:PUB29 "plant U-box 29" specie... 274 4.4e-23 1
TAIR|locus:2013688 - symbol:PUB17 "plant U-box 17" specie... 274 3.6e-22 1
TAIR|locus:2141226 - symbol:PUB8 "plant U-box 8" species:... 265 4.4e-22 1
TAIR|locus:2102455 - symbol:AT3G54790 species:3702 "Arabi... 213 2.3e-18 2
TAIR|locus:2079706 - symbol:PUB9 "plant U-box 9" species:... 204 5.1e-18 2
TAIR|locus:2158252 - symbol:AT5G67340 species:3702 "Arabi... 194 1.5e-17 2
TAIR|locus:2008813 - symbol:AT1G67530 species:3702 "Arabi... 211 1.6e-16 2
UNIPROTKB|Q6EUK7 - symbol:PUB4 "U-box domain-containing p... 231 1.9e-16 1
TAIR|locus:2146183 - symbol:AT5G18320 species:3702 "Arabi... 216 4.0e-15 1
TAIR|locus:2181077 - symbol:SAUR21 "SMALL AUXIN UP RNA 21... 212 1.1e-14 2
TAIR|locus:2032472 - symbol:AT1G24330 species:3702 "Arabi... 197 1.9e-13 2
TAIR|locus:2194564 - symbol:PUB18 "plant U-box 18" specie... 204 2.2e-13 1
TAIR|locus:2045334 - symbol:PUB4 "plant U-box 4" species:... 205 2.3e-13 1
TAIR|locus:2010424 - symbol:PUB45 "plant U-box 45" specie... 201 2.7e-13 2
TAIR|locus:2152049 - symbol:AT5G65920 species:3702 "Arabi... 196 7.4e-13 1
TAIR|locus:2146198 - symbol:AT5G18330 species:3702 "Arabi... 196 7.5e-13 1
TAIR|locus:2146213 - symbol:AT5G18340 species:3702 "Arabi... 184 1.8e-11 1
TAIR|locus:2115365 - symbol:AT4G36550 species:3702 "Arabi... 179 1.9e-11 2
TAIR|locus:2198190 - symbol:PUB54 "plant U-box 54" specie... 175 6.1e-11 1
TAIR|locus:2144261 - symbol:AT5G11550 species:3702 "Arabi... 170 2.6e-10 1
TAIR|locus:2195563 - symbol:PUB19 "plant U-box 19" specie... 173 6.6e-10 1
TAIR|locus:2050659 - symbol:AT2G45920 species:3702 "Arabi... 164 2.5e-09 1
TAIR|locus:2101353 - symbol:AT3G49060 species:3702 "Arabi... 167 3.9e-09 1
ZFIN|ZDB-GENE-061110-97 - symbol:zgc:154085 "zgc:154085" ... 160 1.1e-08 1
TAIR|locus:2176177 - symbol:AT5G51270 species:3702 "Arabi... 162 1.4e-08 1
UNIPROTKB|Q5ZMC3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 158 1.7e-08 1
TAIR|locus:2117343 - symbol:AT4G25160 species:3702 "Arabi... 160 2.4e-08 1
TAIR|locus:2198165 - symbol:AT1G01660 species:3702 "Arabi... 157 3.0e-08 1
TAIR|locus:2047605 - symbol:AT2G19410 species:3702 "Arabi... 158 3.8e-08 1
TAIR|locus:2075457 - symbol:AT3G02840 species:3702 "Arabi... 151 6.6e-08 1
MGI|MGI:1919387 - symbol:Wdsub1 "WD repeat, SAM and U-box... 152 7.8e-08 1
RGD|1359296 - symbol:Wdsub1 "WD repeat, sterile alpha mot... 152 7.9e-08 1
UNIPROTKB|F1MRF3 - symbol:WDSUB1 "Uncharacterized protein... 151 1.0e-07 1
UNIPROTKB|G3MZA8 - symbol:WDSUB1 "Uncharacterized protein... 151 1.0e-07 1
TAIR|locus:504954932 - symbol:AT5G57035 species:3702 "Ara... 151 2.2e-07 1
UNIPROTKB|E2QX39 - symbol:WDSUB1 "Uncharacterized protein... 148 2.2e-07 1
TAIR|locus:2100372 - symbol:PUB39 "PLANT U-BOX 39" specie... 110 3.2e-07 2
UNIPROTKB|Q8N9V3 - symbol:WDSUB1 "WD repeat, SAM and U-bo... 146 3.7e-07 1
TAIR|locus:2173742 - symbol:AT5G40140 species:3702 "Arabi... 142 1.3e-06 1
TAIR|locus:2154124 - symbol:AT5G62560 species:3702 "Arabi... 107 2.8e-06 2
TAIR|locus:2171810 - symbol:PUB38 "plant U-box 38" specie... 137 4.7e-06 1
TAIR|locus:2050669 - symbol:AT2G45910 species:3702 "Arabi... 139 5.0e-06 1
TAIR|locus:2014584 - symbol:PUB43 "plant U-box 43" specie... 122 5.7e-06 2
TAIR|locus:2198180 - symbol:AT1G01670 species:3702 "Arabi... 132 8.4e-06 1
TAIR|locus:2098816 - symbol:AT3G61390 species:3702 "Arabi... 131 1.5e-05 1
UNIPROTKB|H3BTA3 - symbol:STUB1 "E3 ubiquitin-protein lig... 113 1.6e-05 1
TAIR|locus:2151641 - symbol:AT5G61560 species:3702 "Arabi... 132 2.8e-05 1
UNIPROTKB|Q0DR28 - symbol:PUB57 "U-box domain-containing ... 128 4.2e-05 1
WB|WBGene00000500 - symbol:chn-1 species:6239 "Caenorhabd... 117 0.00021 1
DICTYBASE|DDB_G0293212 - symbol:DDB_G0293212 species:4468... 122 0.00037 1
UNIPROTKB|J9NRV4 - symbol:STUB1 "Uncharacterized protein"... 113 0.00040 1
ZFIN|ZDB-GENE-030131-2963 - symbol:stub1 "STIP1 homology ... 115 0.00042 1
UNIPROTKB|F1P105 - symbol:STUB1 "STIP1 homology and U box... 113 0.00051 1
ASPGD|ASPL0000001660 - symbol:AN5906 species:162425 "Emer... 114 0.00056 1
TAIR|locus:2030462 - symbol:SAUL1 "senescence-associated ... 119 0.00075 1
UNIPROTKB|F1MUH4 - symbol:STUB1 "Uncharacterized protein"... 113 0.00077 1
UNIPROTKB|Q9UNE7 - symbol:STUB1 "E3 ubiquitin-protein lig... 113 0.00078 1
UNIPROTKB|F1RG35 - symbol:STUB1 "Uncharacterized protein"... 113 0.00078 1
MGI|MGI:1891731 - symbol:Stub1 "STIP1 homology and U-Box ... 113 0.00078 1
RGD|1306167 - symbol:Stub1 "STIP1 homology and U-box cont... 113 0.00078 1
UNIPROTKB|Q5ZHY5 - symbol:STUB1 "STIP1 homology and U box... 113 0.00084 1
UNIPROTKB|E1B7G3 - symbol:STUB1 "Uncharacterized protein"... 113 0.00086 1
>TAIR|locus:2012136 [details] [associations]
symbol:PUB26 "plant U-box 26" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011807 HSSP:Q8VZ40
HOGENOM:HOG000238505 eggNOG:NOG262907 ProtClustDB:CLSN2682687
EMBL:AK118346 EMBL:BT029013 IPI:IPI00542667 PIR:E96534
RefSeq:NP_175400.1 UniGene:At.38168 ProteinModelPortal:Q9FXA4
SMR:Q9FXA4 EnsemblPlants:AT1G49780.1 GeneID:841401
KEGG:ath:AT1G49780 TAIR:At1g49780 InParanoid:Q9FXA4 OMA:CTERAKR
PhylomeDB:Q9FXA4 Genevestigator:Q9FXA4 Uniprot:Q9FXA4
Length = 421
Score = 1296 (461.3 bits), Expect = 3.4e-132, P = 3.4e-132
Identities = 257/422 (60%), Positives = 311/422 (73%)
Query: 1 MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRS 60
MPG+LEPLDL +QIPYHFRCPISL+LM DPVT+ TGQTYDR SI+SW+A GNTTCPVTR
Sbjct: 1 MPGNLEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRV 60
Query: 61 PLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXX 120
L+DFTLIPNHTLRRLIQ+WCVANRS GV+RIPTPKQPA+P VR+LL+QAS+ + T+
Sbjct: 61 ALSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVS 120
Query: 121 XXXXXXXXXXX---XXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALL 177
DS+KNR LI+ HN R IL ++ F +I + SS EL ESLALL
Sbjct: 121 VRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIETTSLSS-ELVSESLALL 179
Query: 178 VMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISN 237
V+ +TETEC +ASD ++ ++ LLF SSIE+RVN+AALIE+VL G +S +L+ IS
Sbjct: 180 VLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISG 239
Query: 238 LDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLA-DFD 296
D IFEGV+D+LKN S R LK+GIKA+FALCLVKQTR+ A++AGA L+DRLA DFD
Sbjct: 240 SDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFD 299
Query: 297 KCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXXXXXX 356
+CD ER LATVELLCR+P GCA F EHALTVPL+VKTIL++SDRATEY
Sbjct: 300 RCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAE 359
Query: 357 ERCQRDAVSAGVLTQLLLLVQSDCTDXXXXXXXXXXXXXXDSWPQDSIGNSDDFACSEVV 416
ERC+ +A +AG++TQLLLLVQSDCT+ DSWP DS +SDDF SEV
Sbjct: 360 ERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEVA 419
Query: 417 PF 418
PF
Sbjct: 420 PF 421
>TAIR|locus:2090604 [details] [associations]
symbol:PUB25 "plant U-box 25" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB025624
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT025982 EMBL:AY086503
EMBL:AK229923 IPI:IPI00525992 RefSeq:NP_566632.1 UniGene:At.5707
ProteinModelPortal:Q9LT79 SMR:Q9LT79 EnsemblPlants:AT3G19380.1
GeneID:821472 KEGG:ath:AT3G19380 TAIR:At3g19380 eggNOG:NOG262907
InParanoid:Q9LT79 OMA:ECTERAK PhylomeDB:Q9LT79
ProtClustDB:CLSN2682687 Genevestigator:Q9LT79 Uniprot:Q9LT79
Length = 421
Score = 1251 (445.4 bits), Expect = 2.0e-127, P = 2.0e-127
Identities = 257/426 (60%), Positives = 308/426 (72%)
Query: 1 MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGN-TTCPVTR 59
MP ++EPLDL +QIPYHFRCPISLELM DPVTVCTGQTYDR SIESWV+ GN TTCPVTR
Sbjct: 1 MPRNIEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTR 60
Query: 60 SPLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYX 119
+PL+DFTLIPNHTLRRLIQ+WCVANRS GV+RIPTPKQPA+P+ VR LL+QAS+ + T+
Sbjct: 61 APLSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHV 120
Query: 120 XXXXXXXXXXXX---XXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLAL 176
DSDKNR LI++HN IL ++ F+ +T SS EL ESLAL
Sbjct: 121 SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFS----ETTSS-ELVSESLAL 175
Query: 177 LVMFPLTE-TECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQI 235
LVM P+TE + + I+SD ++ L+ LLF SSIE RVN+AALIEIV G +S +L+ I
Sbjct: 176 LVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSI 235
Query: 236 SNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLA-D 294
SN + +FEGV+D+L+N S R LK+GIK LFALC VK TR+ A+ AGA E L+DRLA D
Sbjct: 236 SNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAAD 295
Query: 295 FDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXXXX 354
FD+CD ERALATVELLCR P GCA F EHALTVPLLVKTIL++SDRATEY
Sbjct: 296 FDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT 355
Query: 355 XXERCQRDAVSAGVLTQLLLLVQSDCTDXXXXXXXXXXXXXXDSWPQ-DSIGNSDDFACS 413
ER + +A AGV+ QLLL+VQS+CT+ DSWP +S NSDDF CS
Sbjct: 356 AEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCS 415
Query: 414 -EVVPF 418
+VVPF
Sbjct: 416 SQVVPF 421
>TAIR|locus:2039265 [details] [associations]
symbol:PUB23 "plant U-box 23" species:3702 "Arabidopsis
thaliana" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0000165 "MAPK cascade" evidence=RCA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009862 "systemic acquired
resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0031348
"negative regulation of defense response" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA] [GO:0042742
"defense response to bacterium" evidence=RCA] [GO:0043069 "negative
regulation of programmed cell death" evidence=RCA] [GO:0050832
"defense response to fungus" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 EMBL:CP002685
GenomeReviews:CT485783_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009414 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0051865
EMBL:AC007017 GO:GO:0002679 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG331697 ProtClustDB:CLSN2684770 EMBL:BT005829
EMBL:AK227343 IPI:IPI00548709 PIR:G84774 RefSeq:NP_181137.2
UniGene:At.43241 ProteinModelPortal:Q84TG3 SMR:Q84TG3 IntAct:Q84TG3
STRING:Q84TG3 PRIDE:Q84TG3 EnsemblPlants:AT2G35930.1 GeneID:818166
KEGG:ath:AT2G35930 TAIR:At2g35930 InParanoid:Q84TG3 OMA:RLHARAW
PhylomeDB:Q84TG3 Genevestigator:Q84TG3 Uniprot:Q84TG3
Length = 411
Score = 449 (163.1 bits), Expect = 1.9e-42, P = 1.9e-42
Identities = 125/394 (31%), Positives = 192/394 (48%)
Query: 1 MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGN-TTCPVTR 59
M G + +D ++IP F CPISLE+M DPV V TG TYDR SIE W+ G +CPVT+
Sbjct: 1 MSGGI--MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTK 58
Query: 60 SPLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLL-NQASSESNTY 118
+TD L PNHTLRRLIQ WC N S+GV+RIPTP+ P S + L+ + ASS N
Sbjct: 59 QDITDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSASSHENQV 118
Query: 119 XXXXXXXXXXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLV 178
++ N+ + + V F NI + + L E+L LL
Sbjct: 119 KCLKRLRQIVS----ENATNKRCLEAAGVPE-----FLANIVSNDSENGSLTDEALNLLY 169
Query: 179 MFPLTETECMEIAS---DADKITSLSSLLFHSSIEVRVNSAALIEIVLA---GMRSQELR 232
+ET + + D + + SL+ ++ E RV + L++ +L M+S L+
Sbjct: 170 HLETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLK 229
Query: 233 AQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRL 292
E+F V+ IL + S + K + L +C + R+KAV AG +++ L
Sbjct: 230 P------EVFTEVVQILDDRISQ-KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELL 282
Query: 293 AD--F--DKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXX 348
D F ++ E A+ ++LLC+ G AEF H + ++ K IL++S A++
Sbjct: 283 MDESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRV 342
Query: 349 XXXXXX--XXERCQRDAVSAGVLTQLLLLVQSDC 380
+ + GV+ +L L++Q C
Sbjct: 343 LLSVGRFCATPALLHEMLQLGVVAKLCLVLQVSC 376
>TAIR|locus:2169861 [details] [associations]
symbol:AT5G37490 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0010200 "response to chitin"
evidence=IEP;RCA] [GO:0002679 "respiratory burst involved in
defense response" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0035556 "intracellular signal
transduction" evidence=RCA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002688 GenomeReviews:BA000015_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB025630 HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT020311
EMBL:BT020439 IPI:IPI00541809 RefSeq:NP_198565.1 UniGene:At.30484
ProteinModelPortal:Q5PNY6 SMR:Q5PNY6 STRING:Q5PNY6 PRIDE:Q5PNY6
EnsemblPlants:AT5G37490.1 GeneID:833727 KEGG:ath:AT5G37490
TAIR:At5g37490 eggNOG:NOG287305 InParanoid:Q5PNY6 OMA:HAPLRHE
PhylomeDB:Q5PNY6 ProtClustDB:CLSN2916550 Genevestigator:Q5PNY6
Uniprot:Q5PNY6
Length = 435
Score = 447 (162.4 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 120/379 (31%), Positives = 194/379 (51%)
Query: 6 EPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDF 65
EP + + IP F+CPIS++LM DPV + TG TYDR SIE+W+ +GN TCPVT + LT F
Sbjct: 24 EP-ESEITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTF 82
Query: 66 TLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNT--YXXXXX 123
IPNHT+R++IQ WCV S +QRIPTP+ P P V + + SS + Y
Sbjct: 83 DQIPNHTIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGV 142
Query: 124 XXXXXXXXXXDSDKNRSLISSHNVRAILSQVF--FTNINVKTASSPELAHESLALLV-MF 180
+S+KNR ++ ++V +L F F+ T + +E L+LL MF
Sbjct: 143 IIEKIKKLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTF----MLNEILSLLTWMF 198
Query: 181 PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDE 240
P+ ++AS A ++ LL + VR N+A +++ +L+ ++ + N
Sbjct: 199 PIGLEGISKLAS-ATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVEN--G 255
Query: 241 IFEGVIDILKNLSSYPRGLKVGIKALFALCLVK-QTRYKAVAAGAAETLVDRLADFDKCD 299
+ E ++ ++++ S K + A++ + L K + + + G V+ + D +
Sbjct: 256 VAEALVKLIRDSVS-SSSTKSSLIAIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSV 314
Query: 300 AERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXXXXXXERC 359
E+ALA ++ +C G E ++AL +PLLVK I K+S+ AT
Sbjct: 315 CEKALAVLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTV 374
Query: 360 Q-RDAVSAGVLTQLLLLVQ 377
DAV G ++LL++Q
Sbjct: 375 AVEDAVRLGAFQKVLLVLQ 393
>TAIR|locus:2013850 [details] [associations]
symbol:CMPG1 ""CYS, MET, PRO, and GLY protein 1""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] [GO:0035556
"intracellular signal transduction" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC026480
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 UniGene:At.23473 HSSP:Q8VZ40 EMBL:AY034913
EMBL:AY063104 EMBL:AY087421 IPI:IPI00524256 PIR:D96686
RefSeq:NP_564866.1 UniGene:At.71474 ProteinModelPortal:Q9C8D1
SMR:Q9C8D1 STRING:Q9C8D1 EnsemblPlants:AT1G66160.1 GeneID:842931
KEGG:ath:AT1G66160 TAIR:At1g66160 eggNOG:NOG283749
HOGENOM:HOG000238505 InParanoid:Q9C8D1 OMA:AFSENAN PhylomeDB:Q9C8D1
ProtClustDB:CLSN2689039 Genevestigator:Q9C8D1 Uniprot:Q9C8D1
Length = 431
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 103/378 (27%), Positives = 183/378 (48%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
++ + IP F+CPIS ELM DPV + +G TYDR +IE W +G TCPVT + LT I
Sbjct: 28 EVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQI 87
Query: 69 PNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQ--ASSESNTYXXXXXXXX 126
PNHT+RR+IQ WC ++ G++RIPTP+ P V + + A++ Y
Sbjct: 88 PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 127 XXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLV-MFPLTET 185
+S++NR + + +L V F + + A++ L E++++L M P+
Sbjct: 148 KMTRLGKESERNRKCVKENGAGLVLC-VCFDAFS-ENANASLLLEETVSVLTWMLPIG-- 203
Query: 186 ECMEIASDADKITSLSSLLFHSSIEVRVN---SAALIEIVLAGMRSQELRAQISNLDEIF 242
+E S K+T+ SS F+ +E+ N +AA + L + + A ++ ++ +
Sbjct: 204 --LEGQS---KLTTTSS--FNRLVELLRNGDQNAAFLIKELLELNVTHVHA-LTKINGVQ 255
Query: 243 EGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAER 302
E + + S+ L + I + + ++T + + V+ L D + E+
Sbjct: 256 EAFMKSINRDSTCVNSL-ISIHHM--ILTNQETVSRFLELDLVNITVEMLVDSENSVCEK 312
Query: 303 ALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXXXXXXERCQRD 362
AL + ++C G + + L +P+LVK ILKIS++ + +
Sbjct: 313 ALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKDLVSVMWKVCKSGDGSEVE-E 371
Query: 363 AVSAGVLTQLLLLVQSDC 380
A+ G +L++++Q C
Sbjct: 372 ALRLGAFKKLVVMLQVGC 389
>TAIR|locus:2097390 [details] [associations]
symbol:AT3G49810 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR EMBL:AL132965 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:BT029174
EMBL:AY084697 IPI:IPI00522796 PIR:T46047 RefSeq:NP_566927.1
UniGene:At.43608 UniGene:At.71195 ProteinModelPortal:Q058P4
SMR:Q058P4 IntAct:Q058P4 PRIDE:Q058P4 EnsemblPlants:AT3G49810.1
GeneID:824143 KEGG:ath:AT3G49810 TAIR:At3g49810 eggNOG:NOG289804
HOGENOM:HOG000077474 InParanoid:Q058P4 OMA:ELRKMMD PhylomeDB:Q058P4
ProtClustDB:CLSN2686657 Genevestigator:Q058P4 Uniprot:Q058P4
Length = 448
Score = 202 (76.2 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 41/76 (53%), Positives = 48/76 (63%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
++ LDL IP F CPISLE M DPVT+CTGQTY+R +I W G+ TCP T L D
Sbjct: 56 IKELDLQ-DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWD 114
Query: 65 FTLIPNHTLRRLIQDW 80
T+ PN TL LI W
Sbjct: 115 DTVTPNKTLHHLIYTW 130
Score = 185 (70.2 bits), Expect = 8.6e-29, Sum P(2) = 8.6e-29
Identities = 56/217 (25%), Positives = 100/217 (46%)
Query: 165 SSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLA 224
+S + E +A+LV L + A K++ + +L S E ++N A LI ++
Sbjct: 202 TSHAVGSEVVAILVSLDLDSDSKSGLMQPA-KVSLIVDMLNDGSNETKINCARLIRGLV- 259
Query: 225 GMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGA 284
+ RA++ + + G++ ++K+ + G+ ++ L + + KQ R V+ GA
Sbjct: 260 --EEKGFRAELVSSHSLLVGLMRLVKD-KRHRNGVSPALRLLKPISVHKQVRSLMVSIGA 316
Query: 285 AETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEY 344
LVD L D E AL ++ LC G + A T+P V+ ++++S+ T Y
Sbjct: 317 VPQLVDILPSLDPECLELALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNY 376
Query: 345 XXXXXXXXXXXX-ERCQRDAVSAGVLTQLLLLVQSDC 380
E C AV G+ +LLL++QS C
Sbjct: 377 ALSILWSVCKLAPEECSPLAVEVGLAAKLLLVIQSGC 413
Score = 45 (20.9 bits), Expect = 3.5e-14, Sum P(2) = 3.5e-14
Identities = 9/19 (47%), Positives = 14/19 (73%)
Query: 97 QPAEPSLVRTLLNQASSES 115
QPA+ SL+ +LN S+E+
Sbjct: 229 QPAKVSLIVDMLNDGSNET 247
>TAIR|locus:2017719 [details] [associations]
symbol:AT1G23030 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0016567
"protein ubiquitination" evidence=IEA] [GO:0010200 "response to
chitin" evidence=IEP] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AF000657
HOGENOM:HOG000238412 HSSP:Q8VZ40 ProtClustDB:CLSN2681864
EMBL:BT002518 EMBL:AK221923 IPI:IPI00532693 PIR:D86364
RefSeq:NP_173716.1 UniGene:At.41572 UniGene:At.74178
ProteinModelPortal:Q8GUG9 SMR:Q8GUG9 PaxDb:Q8GUG9 PRIDE:Q8GUG9
EnsemblPlants:AT1G23030.1 GeneID:838911 KEGG:ath:AT1G23030
TAIR:At1g23030 eggNOG:KOG0167 InParanoid:Q8GUG9 OMA:IDCGNLT
PhylomeDB:Q8GUG9 Genevestigator:Q8GUG9 Uniprot:Q8GUG9
Length = 612
Score = 324 (119.1 bits), Expect = 1.8e-28, P = 1.8e-28
Identities = 102/323 (31%), Positives = 152/323 (47%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP F CP+SLELM DPV V TGQTY+R I+ W+ GN TCP T+ L +FTL PN+ L
Sbjct: 241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVL 300
Query: 74 RRLIQDWCVAN---RSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXX 130
R LI WC + + G T K + S++R L+ + SS S T
Sbjct: 301 RSLISRWCAEHNIEQPAGYINGRT-KNSGDMSVIRALVQRLSSRS-TEDRRNAVSEIRSL 358
Query: 131 XXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEI 190
+D NR LI+ +L +N+ T+ ++ ++ + E E+
Sbjct: 359 SKRSTD-NRILIAEAGAIPVL-------VNLLTSEDVATQENAITCVLNLSIYENN-KEL 409
Query: 191 ASDADKITSLSSLLFHSSIEVRVNSAA-LIEIVLAGMRSQELRAQISNLDEIFEGVIDIL 249
A +TS+ +L ++E R N+AA L + LA E + I I ++D+L
Sbjct: 410 IMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLA----DENKIIIGGSGAI-PALVDLL 464
Query: 250 KNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCD-AERALATVE 308
+N PRG K ALF LC+ + +AV AG LV L+D + + AL +
Sbjct: 465 EN--GTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDEALTILS 522
Query: 309 LLCRIPAGCAEFAEHALTVPLLV 331
+L + + A T+P L+
Sbjct: 523 VLANNQDAKSAIVK-ANTLPALI 544
>TAIR|locus:2079964 [details] [associations]
symbol:PUB22 "plant U-box 22" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA;IGI;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0010200
"response to chitin" evidence=IEP;RCA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0002679 "respiratory burst involved in defense
response" evidence=IGI;RCA] [GO:0006952 "defense response"
evidence=IGI] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0006865 "amino acid transport" evidence=RCA]
[GO:0015824 "proline transport" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005829 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0009414
GO:GO:0010200 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 GO:GO:0051865 EMBL:AL050300 GO:GO:0002679 HSSP:Q8VZ40
HOGENOM:HOG000238505 EMBL:BT015763 EMBL:BT020203 EMBL:AK228993
IPI:IPI00521627 PIR:T08454 RefSeq:NP_190813.1 UniGene:At.35294
ProteinModelPortal:Q9SVC6 SMR:Q9SVC6 STRING:Q9SVC6
EnsemblPlants:AT3G52450.1 GeneID:824410 KEGG:ath:AT3G52450
TAIR:At3g52450 eggNOG:NOG331697 InParanoid:Q9SVC6 OMA:RNSEMAM
PhylomeDB:Q9SVC6 ProtClustDB:CLSN2684770 Genevestigator:Q9SVC6
Uniprot:Q9SVC6
Length = 435
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 72/202 (35%), Positives = 113/202 (55%)
Query: 8 LDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGN-TTCPVTRSPLTDFT 66
+D ++IP F CPISL++M DPV V TG TYDR SIE W+ +G +CPVT+ +T+
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60
Query: 67 LIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXX 126
L PNHTLRRLIQ WC N S+G++RIPTPK P S + L+ ++SS ++
Sbjct: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSS---SHLNQVKCLK 117
Query: 127 XXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETE 186
++ N+ + + V L+ + +N +V T +SP SL+ + + ++
Sbjct: 118 RLRQIVSENTTNKRCLEAAEVPEFLANIV-SN-SVDTYNSPS---SSLSSSNLNDMCQSN 172
Query: 187 CMEIASDADK--ITSLSSLLFH 206
+E D+ + + S+L+H
Sbjct: 173 MLENRFDSSRSLMDEALSVLYH 194
Score = 154 (59.3 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 59/251 (23%), Positives = 115/251 (45%)
Query: 140 SLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASD---ADK 196
S +SS N+ + N + SS L E+L++L +ET + ++ +
Sbjct: 158 SSLSSSNLNDMCQSNMLEN---RFDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNL 214
Query: 197 ITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLD-EIFEGVIDILKNLSSY 255
+ +L+ ++ E R +A L++ +L QI L+ E+F VI IL + S+
Sbjct: 215 VKTLTKIMQRGIYESRAYAALLLKKLLEVADPM----QIILLERELFGEVIQILHDQISH 270
Query: 256 PRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLAD--F--DKCDAERALATVELLC 311
+ + ++ L C + R+KAV G +++ L D F ++ ++E A+ +++LC
Sbjct: 271 -KATRSAMQILVITCPWGRNRHKAVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLC 329
Query: 312 RIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXXXX--XXERCQRDAVSAGVL 369
+ G AEF H + ++ K IL++S +E ++ + GV+
Sbjct: 330 QCAEGRAEFLNHGAAIAVVSKKILRVSQITSERAVRVLLSVGRFCATPSLLQEMLQLGVV 389
Query: 370 TQLLLLVQSDC 380
+L L++Q C
Sbjct: 390 AKLCLVLQVSC 400
>UNIPROTKB|Q5VRH9 [details] [associations]
symbol:PUB12 "U-box domain-containing protein 12"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AP008212
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 EMBL:AP002842 EMBL:AK067611 EMBL:AK071080
RefSeq:NP_001056535.2 UniGene:Os.11259 ProteinModelPortal:Q5VRH9
EnsemblPlants:LOC_Os06g01304.1 GeneID:4339839 KEGG:osa:4339839
Gramene:Q5VRH9 eggNOG:NOG242845 OMA:KTGSPRN ProtClustDB:CLSN2695872
Uniprot:Q5VRH9
Length = 611
Score = 308 (113.5 bits), Expect = 9.8e-27, P = 9.8e-27
Identities = 102/340 (30%), Positives = 164/340 (48%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP FRCPISLELM DPV V +GQTY+R I+ W+ +G+ TCP T+ PL+ +L PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 74 RRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXXXXX 133
+ LI WC AN G++ +P KQ + ++ +++S+ Y
Sbjct: 288 KSLISQWCEAN---GIE-LPKNKQNSR--------DKKAAKSSDYDHAGLVSLMNRLRSG 335
Query: 134 DSDKNRS------LISSHNV--RAILSQVFFTN--INVKTASSPELAHESLALLVMFPLT 183
+ D+ R+ L++ NV R +++ +N+ ++S P ++ L+ +
Sbjct: 336 NQDEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIH 395
Query: 184 ETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFE 243
E I D+ I + +L S+E R N+AA + L+ + E + I I
Sbjct: 396 ENNKASIV-DSHAIPKIVEVLKTGSMETRENAAATL-FSLSVV--DENKVTIGAAGAI-P 450
Query: 244 GVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERA 303
+I++L + S PRG K A+F LC+ + + +AV AG L++ L D + A
Sbjct: 451 PLINLLCDGS--PRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDEA 508
Query: 304 LATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
L+ + +L P G A +P LV+ I S R E
Sbjct: 509 LSLLSILAGNPEGKIVIARSE-PIPPLVEVIKTGSPRNRE 547
>TAIR|locus:2075140 [details] [associations]
symbol:PUB13 "plant U-box 13" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0016567
"protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0042742 "defense response to bacterium"
evidence=IGI] [GO:0000902 "cell morphogenesis" evidence=RCA]
[GO:0006487 "protein N-linked glycosylation" evidence=RCA]
[GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
[GO:0016049 "cell growth" evidence=RCA] [GO:0032880 "regulation of
protein localization" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] [GO:0048193 "Golgi vesicle
transport" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0042742 EMBL:AL133314
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY042791 EMBL:AY128813
IPI:IPI00531350 PIR:T45588 RefSeq:NP_190235.1 UniGene:At.23070
ProteinModelPortal:Q9SNC6 SMR:Q9SNC6 STRING:Q9SNC6 PaxDb:Q9SNC6
PRIDE:Q9SNC6 EnsemblPlants:AT3G46510.1 GeneID:823804
KEGG:ath:AT3G46510 TAIR:At3g46510 eggNOG:NOG269633
InParanoid:Q9SNC6 OMA:DSRIQEH PhylomeDB:Q9SNC6
ProtClustDB:CLSN2684834 Genevestigator:Q9SNC6 Uniprot:Q9SNC6
Length = 660
Score = 307 (113.1 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 108/335 (32%), Positives = 152/335 (45%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP FRCPISLE+M DPV V +GQTY+R IE W+ G++TCP T+ LT TL PN+ L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 74 RRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXXXXX 133
R LI WC AN ++ P P P V + + A E+N
Sbjct: 316 RSLIAQWCEAN---DIEP-PKPPSSLRPRKVSSFSSPA--EANKIEDLMWRLAYGNPEDQ 369
Query: 134 DSDKNR-SLISSHNV--RAILSQVFFTNINVKTASSPE--LAHESLALLVMFPLTETECM 188
S L++ N R +++ + V S+P+ + S+ L+ + E
Sbjct: 370 RSAAGEIRLLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICENNKG 429
Query: 189 EIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDI 248
I S A I + +L S+E R N+AA + L+ + E + I L I V+
Sbjct: 430 AIVS-AGAIPGIVQVLKKGSMEARENAAATL-FSLSVI--DENKVTIGALGAIPPLVV-- 483
Query: 249 LKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVE 308
L N + RG K ALF LC+ + + KA+ AG TL L + + ALA +
Sbjct: 484 LLNEGTQ-RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMVDEALAILA 542
Query: 309 LLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
+L P G A VP LV+ I S R E
Sbjct: 543 ILSSHPEGKAIIGSSD-AVPSLVEFIRTGSPRNRE 576
>UNIPROTKB|Q0IMG9 [details] [associations]
symbol:SPL11 "E3 ubiquitin-protein ligase SPL11"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA] [GO:0031348 "negative regulation of
defense response" evidence=IMP] [GO:0043069 "negative regulation of
programmed cell death" evidence=IMP] [GO:0048586 "regulation of
long-day photoperiodism, flowering" evidence=IMP]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005829 GO:GO:0005634
GO:GO:0006952 SUPFAM:SSF48371 GO:GO:0031348 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0043069 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0009908 GO:GO:0004842 GO:GO:0000151
EMBL:DP000011 EMBL:AP008218 GO:GO:0048586 eggNOG:NOG242845
EMBL:AY652589 EMBL:AY652590 EMBL:AK105835 RefSeq:NP_001067077.2
UniGene:Os.21174 ProteinModelPortal:Q0IMG9 SMR:Q0IMG9
GeneID:4352575 KEGG:dosa:Os03t0275900-01 KEGG:dosa:Os12t0570000-01
KEGG:osa:4352575 Gramene:Q0IMG9 Uniprot:Q0IMG9
Length = 694
Score = 306 (112.8 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 97/328 (29%), Positives = 158/328 (48%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ IP FRCPISLELM DPV V TGQTY+R IE W+A+G+ TCP T+ ++ L PN+
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXXX 131
LR LI WC N G++ P PK+ +P+ T +S +N
Sbjct: 331 VLRSLISQWCETN---GME--P-PKRSTQPNKP-TPACSSSERANIDALLSKLCSPDTEE 383
Query: 132 XXDSDKNRSLISSHNV--RAILSQVFFTNINVKTASSPELAHESLALLVMFPLT---ETE 186
+ L++ N R +++ + + SS +L + A+ + L+ + +
Sbjct: 384 QRSAAAELRLLAKRNANNRICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLNLSIHEDNK 443
Query: 187 CMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVI 246
I+S A + S+ +L + S+E R N+AA + L+ + E + I + I ++
Sbjct: 444 ASIISSGA--VPSIVHVLKNGSMEARENAAATL-FSLSVI--DEYKVTIGGMGAI-PALV 497
Query: 247 DILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALAT 306
+L S RG K ALF LC+ + + +A+ AG ++ + + + A+A
Sbjct: 498 VLLGEGSQ--RGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMAI 555
Query: 307 VELLCRIPAGCAEFAEHALTVPLLVKTI 334
+ +L P G A A VP+LV+ I
Sbjct: 556 LSILSSHPEGKAAIGA-AEPVPVLVEMI 582
>TAIR|locus:2082682 [details] [associations]
symbol:PUB14 "plant U-box 14" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;ISS] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046777 "protein autophosphorylation"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 EMBL:AL049655
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000238412
eggNOG:NOG242845 OMA:KTGSPRN EMBL:AY065279 EMBL:AY096530
IPI:IPI00539579 PIR:T06735 RefSeq:NP_191045.2 UniGene:At.28098
PDB:1T1H PDBsum:1T1H ProteinModelPortal:Q8VZ40 SMR:Q8VZ40
IntAct:Q8VZ40 STRING:Q8VZ40 PaxDb:Q8VZ40 PRIDE:Q8VZ40
EnsemblPlants:AT3G54850.1 GeneID:824650 KEGG:ath:AT3G54850
TAIR:At3g54850 InParanoid:Q8VZ40 PhylomeDB:Q8VZ40
ProtClustDB:CLSN2690608 EvolutionaryTrace:Q8VZ40
Genevestigator:Q8VZ40 GermOnline:AT3G54850 Uniprot:Q8VZ40
Length = 632
Score = 297 (109.6 bits), Expect = 1.7e-25, P = 1.7e-25
Identities = 101/337 (29%), Positives = 161/337 (47%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP +FRCPISLELM DPV V TGQTY+R SI+ W+ G+ TCP ++ L L PN+ L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 74 RRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXXXXX 133
+ LI WC +N G++ P+ + S T + +SS
Sbjct: 308 KSLIALWCESN---GIE---LPQN--QGSCRTTKIGGSSSSDCDRTFVLSLLEKLANGTT 359
Query: 134 DSDKNRS----LISSHNV--RAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETEC 187
+ + + L++ NV R +++ + V+ SSP+ + ++ + L+ E
Sbjct: 360 EQQRAAAGELRLLAKRNVDNRVCIAEAGAIPLLVELLSSPDPRTQEHSVTALLNLSINEG 419
Query: 188 MEIAS-DADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVI 246
+ A DA IT + +L + S+E R N+AA + L+ + E + I I + +I
Sbjct: 420 NKGAIVDAGAITDIVEVLKNGSMEARENAAATL-FSLSVI--DENKVAIGAAGAI-QALI 475
Query: 247 DILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALAT 306
+L+ + RG K A+F LC+ + + +AV G + L L D + ALA
Sbjct: 476 SLLEEGTR--RGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEALAI 533
Query: 307 VELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
+ +L G AE A ++P+LV+ I S R E
Sbjct: 534 LAILSTNQEGKTAIAE-AESIPVLVEIIRTGSPRNRE 569
>TAIR|locus:2174814 [details] [associations]
symbol:CMPG2 ""CYS, MET, PRO, and GLY protein 2""
species:3702 "Arabidopsis thaliana" [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP;RCA] [GO:0002679
"respiratory burst involved in defense response" evidence=RCA]
[GO:0035556 "intracellular signal transduction" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB010076
HSSP:Q8VZ40 HOGENOM:HOG000238505 EMBL:BT023419 EMBL:BT025629
IPI:IPI00540273 RefSeq:NP_201271.1 UniGene:At.19743
UniGene:At.74061 ProteinModelPortal:Q9FLF4 SMR:Q9FLF4 STRING:Q9FLF4
PaxDb:Q9FLF4 PRIDE:Q9FLF4 EnsemblPlants:AT5G64660.1 GeneID:836587
KEGG:ath:AT5G64660 TAIR:At5g64660 eggNOG:NOG315056
InParanoid:Q9FLF4 OMA:CAGLLEF PhylomeDB:Q9FLF4
ProtClustDB:CLSN2684525 Genevestigator:Q9FLF4 Uniprot:Q9FLF4
Length = 420
Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
Identities = 91/389 (23%), Positives = 177/389 (45%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
DL + +P FRCPISL++M PV++CTG TYDR SI+ W+ GN TCP T L + I
Sbjct: 5 DLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFI 64
Query: 69 PNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXX 128
PN TL+RLI+ W + R P + + ++ E
Sbjct: 65 PNRTLQRLIEIWSDSVRRRTCVESAELAAPTRDEIADAI-DRVKIEKEE-RDDREVLSKI 122
Query: 129 XXXXXDSDKNRSLISSHN--VRAILSQVFFTNINVKTASSPELAHESLALL--VMFPLTE 184
+SD NR ++ + V+ ++ + + +A+ + E++ +L + +++
Sbjct: 123 VRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILSTIRSKVSD 182
Query: 185 TECME---IASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEI 241
+ + D+++ + L ++E++++ A L+E + S+ L A+ L
Sbjct: 183 RRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIAERDGL--- 239
Query: 242 FEGVIDILKNLS--SYPRGLKVGIKALFALCLVKQTRY----KAVAAGAAETLVDRLADF 295
+ +++K++S S ++ + L A+ K+ + + + + L D +
Sbjct: 240 ---ITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKLLSDSTSSL 296
Query: 296 DKCDAERALATVELLCRIPAGCAEFAE-HALTVPLLVKTILKISDRATEYXXXXXXXXXX 354
E+ L +E+L G +E + +VK ++K+S ATE+
Sbjct: 297 SVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAVTVLWSVSY 356
Query: 355 XXERCQR-DAV-SAGVLTQLLLLVQSDCT 381
+ + +AV S +T++LLL+QS+C+
Sbjct: 357 LFKEDKALEAVTSVNGVTKILLLLQSNCS 385
>TAIR|locus:2144846 [details] [associations]
symbol:AT5G09800 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0010200 "response to chitin" evidence=IEP;RCA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002688 GenomeReviews:BA000015_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AB020752 EMBL:AL353994 HSSP:Q8VZ40 HOGENOM:HOG000238505
eggNOG:NOG315056 ProtClustDB:CLSN2684525 EMBL:BT010883
EMBL:AK175195 EMBL:AK176549 IPI:IPI00520675 PIR:T49918
RefSeq:NP_196542.1 UniGene:At.32456 ProteinModelPortal:Q9LXE3
SMR:Q9LXE3 IntAct:Q9LXE3 EnsemblPlants:AT5G09800.1 GeneID:830840
KEGG:ath:AT5G09800 TAIR:At5g09800 InParanoid:Q9LXE3 OMA:RSEICDG
PhylomeDB:Q9LXE3 Genevestigator:Q9LXE3 Uniprot:Q9LXE3
Length = 409
Score = 279 (103.3 bits), Expect = 2.0e-24, P = 2.0e-24
Identities = 100/387 (25%), Positives = 173/387 (44%)
Query: 9 DLSVQ-IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTL 67
DL + +P F+CPISL++M PV++ TG TYDR SI+ W+ GN TCP T L +
Sbjct: 5 DLYITTVPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEF 64
Query: 68 IPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXX 127
+PN TL RLI W S + R + P + R +N A +
Sbjct: 65 VPNLTLHRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIER---FRIENDARSK 116
Query: 128 XXXXXXDSDKNRSLISSHN-VRAILSQVFFTNINVKTASSPELAHESLALLVM-----FP 181
+SD+NR ++ + A+L + + N S L E++ +L M F
Sbjct: 117 ILRFARESDENREFLAGKDDFVAMLVDLISDSRNFSD-SQLLLVGEAVKILSMIRRKIFD 175
Query: 182 LTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEI 241
+ + + D +TS L+ + +++++ +A++E + S+ + A+ L
Sbjct: 176 RRRLSNLILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGL--- 232
Query: 242 FEGVIDILKNLSSYPRG--LKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLAD--FDK 297
V +I+K +SS ++ + L A+ K+ + + L L D
Sbjct: 233 ---VTEIIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSV 289
Query: 298 CDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXX-XXXX 356
E+ L +E + G +E + + V +V ++K+S ATE+
Sbjct: 290 SVTEKCLKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFK 348
Query: 357 ERCQRDAVSA--GVLTQLLLLVQSDCT 381
E+ +DAV GV T++LLL+QS+C+
Sbjct: 349 EKKAQDAVIRINGV-TKILLLLQSNCS 374
>TAIR|locus:2162276 [details] [associations]
symbol:PUB15 "Plant U-Box 15" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0006944 "cellular membrane
fusion" evidence=RCA] [GO:0030048 "actin filament-based movement"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB016888 GO:GO:0000151 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK175585 IPI:IPI00547462 RefSeq:NP_199049.2
UniGene:At.51075 ProteinModelPortal:Q681N2 SMR:Q681N2 PaxDb:Q681N2
PRIDE:Q681N2 EnsemblPlants:AT5G42340.1 GeneID:834240
KEGG:ath:AT5G42340 TAIR:At5g42340 eggNOG:NOG263115
InParanoid:Q681N2 OMA:CCHDGSK PhylomeDB:Q681N2
ProtClustDB:CLSN2681658 Genevestigator:Q681N2 Uniprot:Q681N2
Length = 660
Score = 287 (106.1 bits), Expect = 2.3e-24, P = 2.3e-24
Identities = 89/308 (28%), Positives = 151/308 (49%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
S+ +P+ F CPI+LE+M DPV + TGQTY++ SI+ W G+ TCP TR L +L PN
Sbjct: 287 SLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPN 346
Query: 71 HTLRRLIQDWCVANRSFGV-QRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXX 129
L+ LI WC N +F + ++ +P E +LL +A S S
Sbjct: 347 FALKNLIMQWCEKN-NFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQL-EEQRRSVKQMR 404
Query: 130 XXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETEC-M 188
++ +NR LI++ +L Q+ S P+ + A+ + L+ E
Sbjct: 405 LLARENPENRVLIANAGAIPLLVQLL---------SYPDSGIQENAVTTLLNLSIDEVNK 455
Query: 189 EIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDI 248
++ S+ I ++ +L + + E R NSAA + L+ + ++ +SN ++D+
Sbjct: 456 KLISNEGAIPNIIEILENGNREARENSAAAL-FSLSMLDENKVTIGLSNG---IPPLVDL 511
Query: 249 LKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVE 308
L++ + RG K + ALF L L + +A+ AG + L++ L D + + AL+ +
Sbjct: 512 LQHGTL--RGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSILL 569
Query: 309 LLCRIPAG 316
LL P G
Sbjct: 570 LLASHPEG 577
>TAIR|locus:2013990 [details] [associations]
symbol:AT1G71020 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC016972
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC008148 HOGENOM:HOG000238412 EMBL:AY075626 EMBL:AY142062
EMBL:AK220971 IPI:IPI00534706 PIR:E96734 RefSeq:NP_177258.3
UniGene:At.43068 HSSP:Q8VZ40 ProteinModelPortal:Q9C9A6 SMR:Q9C9A6
IntAct:Q9C9A6 PaxDb:Q9C9A6 PRIDE:Q9C9A6 EnsemblPlants:AT1G71020.1
GeneID:843442 KEGG:ath:AT1G71020 TAIR:At1g71020 eggNOG:NOG261082
InParanoid:Q9C9A6 OMA:FQARESS PhylomeDB:Q9C9A6
ProtClustDB:CLSN2681864 Genevestigator:Q9C9A6 Uniprot:Q9C9A6
Length = 628
Score = 278 (102.9 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 101/345 (29%), Positives = 155/345 (44%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
++ IP F CPISLELM DP V TGQTY+R I+ W+ GN +CP T+ L +FTL PN
Sbjct: 240 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPN 299
Query: 71 HTLRRLIQDWCVAN---RSFGVQRIPTPKQPA-------EPSLVRTLLNQASSESNTYXX 120
+ LR LI WC + + G T + S +R L+ + SS+S
Sbjct: 300 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQS--IED 357
Query: 121 XXXXXXXXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMF 180
S NR LI+ +L ++ ++ + +T + ++ ++
Sbjct: 358 RRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQEN------AVTCILNL 411
Query: 181 PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAA-LIEIVLAGMRSQELRAQISNLD 239
+ E E+ A +TS+ +L S+E R N+AA L + LA E + I
Sbjct: 412 SIYEHN-KELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLA----DENKIIIGASG 466
Query: 240 EIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFD-KC 298
I ++D+L+ S RG K ALF LC+ + + +AV AG + LV L D +
Sbjct: 467 AIM-ALVDLLQYGSV--RGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSSER 523
Query: 299 DAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
A+ AL + +L A +P L+ + K R E
Sbjct: 524 MADEALTILSVLASNQVAKTAILR-ANAIPPLIDCLQKDQPRNRE 567
>TAIR|locus:2093974 [details] [associations]
symbol:PUB29 "plant U-box 29" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010200 "response to chitin"
evidence=IEP] [GO:0070696 "transmembrane receptor protein
serine/threonine kinase binding" evidence=IPI] [GO:0009506
"plasmodesma" evidence=IDA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143
GO:GO:0009506 EMBL:CP002686 GenomeReviews:BA000014_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0010200
EMBL:AB026654 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000238505
ProtClustDB:CLSN2684525 EMBL:AK117976 EMBL:BT005359 IPI:IPI00545400
RefSeq:NP_188501.1 UniGene:At.38506 ProteinModelPortal:Q9LSA6
SMR:Q9LSA6 IntAct:Q9LSA6 ProMEX:Q9LSA6 EnsemblPlants:AT3G18710.1
GeneID:821402 KEGG:ath:AT3G18710 TAIR:At3g18710 eggNOG:NOG292721
InParanoid:Q9LSA6 OMA:YITVPSF PhylomeDB:Q9LSA6
Genevestigator:Q9LSA6 Uniprot:Q9LSA6
Length = 415
Score = 274 (101.5 bits), Expect = 4.4e-23, P = 4.4e-23
Identities = 107/389 (27%), Positives = 177/389 (45%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ +P F+CPISL++M PV++CTG TYDR SI+ W+ GN TCP T L +PN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 72 TLRRLIQDWC--VANRSFGVQRIPTPKQPAE-PSL--VRTLLNQASSESNTYXXXXXXXX 126
TL+RLI W + R G + P E P+ V LL + S N
Sbjct: 70 TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVPTKEEVNVLLERLMSLENLMKIVRFVK- 128
Query: 127 XXXXXXXDSDKNRSLISSH-NVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTET 185
DSD NR +S +L + T KT EL ++ +L +
Sbjct: 129 -------DSDSNREFLSKKMEFVPMLVDIIRTK---KTKI--ELVIMAIRILDSIKVDRE 176
Query: 186 EC--MEIASDA-DKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISN-LDEI 241
+ +A+D D +T++ + ++E ++ S +++ + +S+ + A+ L E+
Sbjct: 177 RLSNLMLANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAERDGVLTEM 236
Query: 242 FEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDA- 300
+ I I + SS P ++ + L + K+ R K +AA A + D L +
Sbjct: 237 MKS-ISITE--SSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDILLTETLTNVA 293
Query: 301 --ERALATVELLCRIPAGCAEFA--EHALTVPLLVKTILKISDRATEYXXXXX--XXXXX 354
E++L +E L G E ++ V +VK +LK+S ATE+
Sbjct: 294 VTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAVTILWCLCYVF 353
Query: 355 XXERCQRDAV--SAGVLTQLLLLVQSDCT 381
++ + V S GV T+LL+++QS+C+
Sbjct: 354 REDKTVEETVERSNGV-TKLLVVIQSNCS 381
>TAIR|locus:2013688 [details] [associations]
symbol:PUB17 "plant U-box 17" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0009626
"plant-type hypersensitive response" evidence=IGI] [GO:0009814
"defense response, incompatible interaction" evidence=IMP]
[GO:0009817 "defense response to fungus, incompatible interaction"
evidence=IGI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0009817 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 UniGene:At.17411 EMBL:AC068667
GO:GO:0000151 eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
HSSP:Q8VZ40 EMBL:AY064045 EMBL:AY150512 IPI:IPI00523315 PIR:A86416
RefSeq:NP_174228.1 UniGene:At.27415 ProteinModelPortal:Q9C7R6
SMR:Q9C7R6 IntAct:Q9C7R6 STRING:Q9C7R6 PRIDE:Q9C7R6
EnsemblPlants:AT1G29340.1 GeneID:839808 KEGG:ath:AT1G29340
TAIR:At1g29340 InParanoid:Q9C7R6 PhylomeDB:Q9C7R6
ProtClustDB:CLSN2679704 Genevestigator:Q9C7R6 Uniprot:Q9C7R6
Length = 729
Score = 274 (101.5 bits), Expect = 3.6e-22, P = 3.6e-22
Identities = 85/313 (27%), Positives = 144/313 (46%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
D + +P F CPISL+LM DPV + TGQTYDR SI W+ G+ TCP T L D ++
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 69 PNHTLRRLIQDWCVANR-SFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXX 127
PN L+ LI WC A+ S+ + +P + +L +A+ + +
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNESFASALPTKAAVEANKATVSILIKYLADGS 419
Query: 128 XXXXXXDSDKNRSLISSHNV-RAILSQV-FFTNINVKTASSPELAHE-SLALLVMFPLTE 184
+ + R L + RA +++ ++ S +A E S+ ++ + E
Sbjct: 420 QAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLLTSENAIAQENSVTAMLNLSIYE 479
Query: 185 TECMEIASDADKITSLSSLLFHS-SIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFE 243
I + D + S+ S+L ++E + N+AA + L+ + E + +I+ +D+ E
Sbjct: 480 KNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATL-FSLSAVH--EYKKRIAIVDQCVE 536
Query: 244 GVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERA 303
+ +L+N PRG K + AL+ L + + G +LV L + + AE A
Sbjct: 537 ALALLLQN--GTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGALKN--EGVAEEA 592
Query: 304 LATVELLCRIPAG 316
+ LL R G
Sbjct: 593 AGALALLVRQSLG 605
>TAIR|locus:2141226 [details] [associations]
symbol:PUB8 "plant U-box 8" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA;NAS] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR001841
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 PROSITE:PS50176 SMART:SM00184 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002687
GenomeReviews:CT486007_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL161554 GO:GO:0008270 GO:GO:0016567
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:EF637083 EMBL:AL031187 EMBL:EF182720 HSSP:Q8VZ40
IPI:IPI00526364 PIR:T05177 RefSeq:NP_193866.1 UniGene:At.65012
ProteinModelPortal:O81902 SMR:O81902 PaxDb:O81902
EnsemblPlants:AT4G21350.1 GeneID:827885 KEGG:ath:AT4G21350
TAIR:At4g21350 eggNOG:NOG271823 HOGENOM:HOG000272744
InParanoid:O81902 OMA:LCKLPEN PhylomeDB:O81902
ProtClustDB:CLSN2685551 ArrayExpress:O81902 Genevestigator:O81902
Uniprot:O81902
Length = 374
Score = 265 (98.3 bits), Expect = 4.4e-22, P = 4.4e-22
Identities = 88/286 (30%), Positives = 140/286 (48%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFT-LI 68
++ +P FRCPISLE+M DPV + +G T+DR SI+ W+ +GN TCP+T+ PL++ LI
Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLI 60
Query: 69 PNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPS----LVRTLLNQASSESNTYXXXXXX 124
PNH LR LI ++ A+ S P +Q S L+ TL++Q+SS ++
Sbjct: 61 PNHALRSLILNF--AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRL 118
Query: 125 XXXXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTE 184
DS R + S VRA L V N V L +SL+LL+ L +
Sbjct: 119 VRLTKR---DSSIRRKVTESGAVRAALDCVDSCN-QV-------LQEKSLSLLLNLSLED 167
Query: 185 TECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEG 244
+ + +D I + ++L S + + +A L+ LA + +A I + +
Sbjct: 168 DNKVGLVADG-VIRRIVTVLRVGSPDCKAIAATLLTS-LAVVEVN--KATIGSYPDAISA 223
Query: 245 VIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVD 290
++ +L+ + R K AL+ALC R + V G+ LV+
Sbjct: 224 LVSLLRVGNDRER--KESATALYALCSFPDNRKRVVDCGSVPILVE 267
>TAIR|locus:2102455 [details] [associations]
symbol:AT3G54790 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AL138650 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:AK118613 IPI:IPI00538000 PIR:T47638
RefSeq:NP_191039.2 UniGene:At.1218 UniGene:At.48768
ProteinModelPortal:Q8GWV5 SMR:Q8GWV5 PaxDb:Q8GWV5 PRIDE:Q8GWV5
EnsemblPlants:AT3G54790.1 GeneID:824644 KEGG:ath:AT3G54790
TAIR:At3g54790 eggNOG:NOG259040 InParanoid:Q8GWV5 OMA:LSHFRNQ
PhylomeDB:Q8GWV5 ProtClustDB:CLSN2680413 Genevestigator:Q8GWV5
Uniprot:Q8GWV5
Length = 760
Score = 213 (80.0 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 39/74 (52%), Positives = 50/74 (67%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ IP +FRCP+S ELM DPV V +GQT+DR SI+ W+ G CP TR LT LIPN+
Sbjct: 236 ISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPNY 295
Query: 72 TLRRLIQDWCVANR 85
T++ +I W ANR
Sbjct: 296 TVKAMIASWLEANR 309
Score = 81 (33.6 bits), Expect = 2.3e-18, Sum P(2) = 2.3e-18
Identities = 50/215 (23%), Positives = 89/215 (41%)
Query: 165 SSPELAHE-SLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVL 223
S +L E ++ L+ ++E I + I L +L + + NSAA + L
Sbjct: 525 SEEKLTQEHAVTALLNLSISELNKAMIV-EVGAIEPLVHVLNTGNDRAKENSAASL-FSL 582
Query: 224 AGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAG 283
+ + Q R +I + + ++++L ++ RG K ALF L + + + V A
Sbjct: 583 SVL--QVNRERIGQSNAAIQALVNLLGK-GTF-RGKKDAASALFNLSITHDNKARIVQAK 638
Query: 284 AAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
A + LV+ L D D ++A+A + L + G +PLLV+T+ S R E
Sbjct: 639 AVKYLVE-LLDPDLEMVDKAVALLANLSAVGEGRQAIVREG-GIPLLVETVDLGSQRGKE 696
Query: 344 YXXXXXXXXXXXXERCQRDAVSAGVLTQLLLLVQS 378
+ + G + L+ L QS
Sbjct: 697 NAASVLLQLCLNSPKFCTLVLQEGAIPPLVALSQS 731
>TAIR|locus:2079706 [details] [associations]
symbol:PUB9 "plant U-box 9" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] [GO:0071215 "cellular response to abscisic
acid stimulus" evidence=IMP] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 GO:GO:0009738
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0071215 GO:GO:0004842 GO:GO:0000151
EMBL:AC009853 HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:AY075636
IPI:IPI00538175 RefSeq:NP_566304.1 UniGene:At.21635
ProteinModelPortal:Q9SRT0 SMR:Q9SRT0 STRING:Q9SRT0 PaxDb:Q9SRT0
PRIDE:Q9SRT0 EnsemblPlants:AT3G07360.1 GeneID:819924
KEGG:ath:AT3G07360 TAIR:At3g07360 eggNOG:NOG271821
InParanoid:Q9SRT0 OMA:LIREMIS PhylomeDB:Q9SRT0
ProtClustDB:CLSN2917129 Genevestigator:Q9SRT0 Uniprot:Q9SRT0
Length = 460
Score = 204 (76.9 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 39/81 (48%), Positives = 52/81 (64%)
Query: 4 SLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLT 63
SLE L+ +V P FRCP+S ELM DPV + +GQTYD+ I+ W+++GN TCP T+ L
Sbjct: 65 SLEMLE-TVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLP 123
Query: 64 DFTLIPNHTLRRLIQDWCVAN 84
L PN +R +I WC N
Sbjct: 124 HTALTPNLLIREMISKWCKKN 144
Score = 80 (33.2 bits), Expect = 5.1e-18, Sum P(2) = 5.1e-18
Identities = 27/105 (25%), Positives = 50/105 (47%)
Query: 190 IASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDIL 249
+ + + I L L ++ R N+AA I L+ + S ++ S I + +ID+L
Sbjct: 253 VCENPNVIPLLIDALRRGTVATRSNAAAAI-FTLSALDSNKVLIGKSG---ILKPLIDLL 308
Query: 250 KNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLAD 294
+ P +K A+F LC+ + R +AV GA L ++++
Sbjct: 309 EE--GNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVRVLGKKISN 351
>TAIR|locus:2158252 [details] [associations]
symbol:AT5G67340 species:3702 "Arabidopsis thaliana"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000165
"MAPK cascade" evidence=RCA] [GO:0006499 "N-terminal protein
myristoylation" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0006865 "amino acid transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0006984 "ER-nucleus signaling pathway" evidence=RCA]
[GO:0007154 "cell communication" evidence=RCA] [GO:0009409
"response to cold" evidence=RCA] [GO:0009414 "response to water
deprivation" evidence=RCA] [GO:0009611 "response to wounding"
evidence=RCA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0009697 "salicylic acid biosynthetic process"
evidence=RCA] [GO:0009738 "abscisic acid mediated signaling
pathway" evidence=RCA] [GO:0009862 "systemic acquired resistance,
salicylic acid mediated signaling pathway" evidence=RCA]
[GO:0009867 "jasmonic acid mediated signaling pathway"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0031348 "negative regulation of
defense response" evidence=RCA] [GO:0034976 "response to
endoplasmic reticulum stress" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=RCA] [GO:0043069
"negative regulation of programmed cell death" evidence=RCA]
[GO:0050832 "defense response to fungus" evidence=RCA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB007645 HOGENOM:HOG000238412
HSSP:Q8VZ40 EMBL:BT015818 EMBL:BT020206 EMBL:AK229487
IPI:IPI00537014 RefSeq:NP_201535.3 UniGene:At.28815
ProteinModelPortal:Q5XEZ8 SMR:Q5XEZ8 STRING:Q5XEZ8 PaxDb:Q5XEZ8
PRIDE:Q5XEZ8 EnsemblPlants:AT5G67340.1 GeneID:836869
KEGG:ath:AT5G67340 TAIR:At5g67340 eggNOG:NOG269447
InParanoid:Q5XEZ8 OMA:LASWCET PhylomeDB:Q5XEZ8
ProtClustDB:CLSN2681130 Genevestigator:Q5XEZ8 Uniprot:Q5XEZ8
Length = 707
Score = 194 (73.4 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 42/107 (39%), Positives = 59/107 (55%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
V++P FRC +SLELM DPV V +GQT++R I+ W+ G CP TR L+ TL PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 72 TLRRLIQDWCVANRSFGVQRIPT--PKQPAEPSLVRTLLNQASSESN 116
+R + WC N + + +P P LV ++ +ASS N
Sbjct: 298 IVRAFLASWCETNNVYPPDPLELIHSSEPF-PLLVESV--RASSSEN 341
Score = 94 (38.1 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
Identities = 43/169 (25%), Positives = 73/169 (43%)
Query: 210 EVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFAL 269
E + NSAA + L+ + +E + +I I E ++D+L + S G K ALF L
Sbjct: 520 EAKANSAATL-FSLSVI--EEYKTEIGEAGAI-EPLVDLLGSGSL--SGKKDAATALFNL 573
Query: 270 CLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPL 329
+ + + K + AGA LV+ L D E+A+ + L + G E +P+
Sbjct: 574 SIHHENKTKVIEAGAVRYLVE-LMDPAFGMVEKAVVVLANLATVREGKIAIGEEG-GIPV 631
Query: 330 LVKTILKISDRATEYXXXXXXXXXXXXERCQRDAVSAGVLTQLLLLVQS 378
LV+ + S R E + + + GV+ L+ L +S
Sbjct: 632 LVEVVELGSARGKENATAALLQLCTHSPKFCNNVIREGVIPPLVALTKS 680
Score = 76 (31.8 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 38/150 (25%), Positives = 70/150 (46%)
Query: 164 ASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVL 223
+SS + E+ A + + T+ + + + I SL SLL+ S + R+ + A+ ++
Sbjct: 432 SSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLY--STDERIQADAVTCLLN 489
Query: 224 AGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKA-LFALCLVKQTRYKAVAA 282
+ ++ I+ I +I +LK + Y K A LF+L ++++ + + A
Sbjct: 490 LSINDNN-KSLIAESGAIVP-LIHVLK--TGYLEEAKANSAATLFSLSVIEEYKTEIGEA 545
Query: 283 GAAETLVDRLADFD---KCDAERALATVEL 309
GA E LVD L K DA AL + +
Sbjct: 546 GAIEPLVDLLGSGSLSGKKDAATALFNLSI 575
>TAIR|locus:2008813 [details] [associations]
symbol:AT1G67530 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC011020 HSSP:Q8VZ40
HOGENOM:HOG000082565 ProtClustDB:CLSN2679347 EMBL:AK117197
EMBL:BT006484 IPI:IPI00538541 PIR:G96698 RefSeq:NP_001154455.1
RefSeq:NP_176920.1 UniGene:At.35639 UniGene:At.66850
ProteinModelPortal:Q9CAG5 SMR:Q9CAG5 IntAct:Q9CAG5 PaxDb:Q9CAG5
PRIDE:Q9CAG5 EnsemblPlants:AT1G67530.1 EnsemblPlants:AT1G67530.2
GeneID:843074 KEGG:ath:AT1G67530 TAIR:At1g67530 eggNOG:NOG240771
InParanoid:Q9CAG5 OMA:GELENTR PhylomeDB:Q9CAG5
Genevestigator:Q9CAG5 Uniprot:Q9CAG5
Length = 782
Score = 211 (79.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 43/100 (43%), Positives = 59/100 (59%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P RCPISL+LMCDPV + +GQTY+R IE W + G+ TCP T+ L +L PN+ ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 75 RLIQDWCVANRSFGVQRIPT-PKQPAEPSLVRTLLNQASS 113
LI WC N G Q IP+ P + + R L+ + S
Sbjct: 333 GLIASWCEQN---GTQ-IPSGPPESQDLDYWRLALSDSES 368
Score = 66 (28.3 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 46/208 (22%), Positives = 82/208 (39%)
Query: 162 KTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEI 221
K SS E +H S L + E + + + L LL IE + AL +
Sbjct: 519 KMISSAE-SHGSATALYLNLSCLDEAKSVIGSSQAVPFLVQLL-QKEIETQCKLDALHAL 576
Query: 222 VLAGMRSQELRAQIS-NLDEIFEGVIDIL-KNLSSYPRGLKVGIKALFALCLVKQTRYKA 279
S + A +S N+ + +G++ +NL ++ + L L ++ + +A
Sbjct: 577 YNLSTYSPNIPALLSSNIIKSLQGLLASTGENL-----WIEKSLAVLLNLASSQEGKDEA 631
Query: 280 VAA-GAAETLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKIS 338
V++ G +L L D + E+A++ + +LC C + +P LV + +
Sbjct: 632 VSSQGMISSLATVLDMGDTTEQEQAVSCLLILCNGRESCIQMVLQEGVIPSLVSISVNGT 691
Query: 339 DRATEYXXXXXXXXXXXXERCQRDAVSA 366
R E ER QRD S+
Sbjct: 692 PRGRE--KSQKLLMLFREERQQRDQPSS 717
>UNIPROTKB|Q6EUK7 [details] [associations]
symbol:PUB4 "U-box domain-containing protein 4"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00185 SMART:SM00504 UniPathway:UPA00143
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AP008208
EMBL:CM000139 GO:GO:0000151 EMBL:AP004030 EMBL:AK062592
RefSeq:NP_001046379.1 UniGene:Os.5133 ProteinModelPortal:Q6EUK7
EnsemblPlants:LOC_Os02g13960.1 GeneID:4328818
KEGG:dosa:Os02t0234300-01 KEGG:osa:4328818 Gramene:Q6EUK7
eggNOG:NOG329430 HOGENOM:HOG000238412 OMA:ENRAYIA
ProtClustDB:CLSN2692596 Uniprot:Q6EUK7
Length = 728
Score = 231 (86.4 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 83/321 (25%), Positives = 142/321 (44%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
D S +P F CPISL+LM DPV TGQTYDRPSI W+ G++TCP + L D L+
Sbjct: 292 DTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLV 351
Query: 69 PNHTLRRLIQDWCVANRSFGVQR-IPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXX 127
PN LR LI WC +G+Q P + + + ++A+ E+N
Sbjct: 352 PNRALRSLISQWCGV---YGLQYDSPESNEGMAECVAASCSSRAAMEANK-----ATARI 403
Query: 128 XXXXXXDSDKNRSLISSHNVRAIL-----SQVFFTNINV------KTASSPELAHES-LA 175
D +N +++ +R + ++ F ++ S+ +A E+ +
Sbjct: 404 LVRMLEDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSNDWMAQENAVT 463
Query: 176 LLVMFPLTETECMEIASDADKITSLSSLLFHS-SIEVRVNSAALIEIVLAGMRSQELRAQ 234
L+ + E I + + +L + + E + N+AA + L+ + + +
Sbjct: 464 ALLNLSIFEPNKGRIMEQEGCLRLIVGVLQNGWTTEAKENAAATL-FSLSVVHN--FKKL 520
Query: 235 ISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLAD 294
I N E + +L +S RG K + ALF L ++ + + + A L+ L +
Sbjct: 521 IMNEPGAVEELASMLTKGTS--RGKKDAVMALFNLSTHPESSARMLESCAVVALIQSLRN 578
Query: 295 FDKCDAERALATVELLCRIPA 315
D +E A + LL + P+
Sbjct: 579 -DTV-SEEAAGALALLMKQPS 597
>TAIR|locus:2146183 [details] [associations]
symbol:AT5G18320 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
IPI:IPI00534776 RefSeq:NP_197333.2 UniGene:At.54897
ProteinModelPortal:Q3E9F7 SMR:Q3E9F7 PaxDb:Q3E9F7 PRIDE:Q3E9F7
EnsemblPlants:AT5G18320.1 GeneID:831950 KEGG:ath:AT5G18320
TAIR:At5g18320 eggNOG:NOG312656 InParanoid:Q3E9F7 OMA:NTIMIEP
PhylomeDB:Q3E9F7 ProtClustDB:CLSN2686550 Genevestigator:Q3E9F7
Uniprot:Q3E9F7
Length = 458
Score = 216 (81.1 bits), Expect = 4.0e-15, P = 4.0e-15
Identities = 75/280 (26%), Positives = 130/280 (46%)
Query: 9 DLS-VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTL 67
D+S V++P F C +S +M +PV + +GQTY++ I W+ TCP T+ L+
Sbjct: 66 DISPVEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLKH-ERTCPKTKQVLSHRLW 124
Query: 68 IPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAE--PSLVRTLLNQASSESNTYXXXXXXX 125
IPNH + LI WC+ N+ + Q+ P+ + AE S + LL + SS S+
Sbjct: 125 IPNHLISDLITQWCLVNK-YDHQK-PSDELVAELFTSDIEALLQRVSSSSSVADQIEAAK 182
Query: 126 XXXXXXXXDSDKNRSLISS-HN-VRAILSQVFFTNINVKTASSPELAHESLALLVMFPLT 183
+ ++ H+ + +LS + + ++ SS EL + L +
Sbjct: 183 ELRHQTKKFPNVRVFFVAGIHDSITRLLSPL--STLDEAVDSSLELQENIVTALFNLSIL 240
Query: 184 ETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFE 243
E+ IA + I L+ L + E R N+AA + L+ + S ++ I N E +
Sbjct: 241 ESNKTVIAENCLVIPLLTKSLKQGTDETRRNAAATLSS-LSAIDSNKII--IGN-SEAVK 296
Query: 244 GVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAG 283
+ID+++ K +F LC+V + + K V+AG
Sbjct: 297 ALIDLIEEGDLL--ATKEATSTVFNLCIVLENKGKVVSAG 334
>TAIR|locus:2181077 [details] [associations]
symbol:SAUR21 "SMALL AUXIN UP RNA 21" species:3702
"Arabidopsis thaliana" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010200 "response to chitin" evidence=IEP] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010200 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AL162351
HOGENOM:HOG000238412 HSSP:Q8VZ40 EMBL:BT015367 EMBL:BT015725
EMBL:AK229397 IPI:IPI00524109 PIR:T48204 RefSeq:NP_195803.1
UniGene:At.33496 ProteinModelPortal:Q9LZW3 SMR:Q9LZW3 PRIDE:Q9LZW3
EnsemblPlants:AT5G01830.1 GeneID:831850 KEGG:ath:AT5G01830
TAIR:At5g01830 eggNOG:NOG307369 InParanoid:Q9LZW3 OMA:IPADFRC
PhylomeDB:Q9LZW3 ProtClustDB:CLSN2687143 Genevestigator:Q9LZW3
Uniprot:Q9LZW3
Length = 674
Score = 212 (79.7 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 39/68 (57%), Positives = 47/68 (69%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP FRCPI+LELM DPV V TGQTYDR SI+ W+ +G+ TCP T L +L+PN L
Sbjct: 274 IPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRAL 333
Query: 74 RRLIQDWC 81
+ LI WC
Sbjct: 334 KNLIVLWC 341
Score = 45 (20.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 25/115 (21%), Positives = 47/115 (40%)
Query: 183 TETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIF 242
++T ++A I L L +++N+ I + L+ + + R I D
Sbjct: 397 SDTVARACIAEAGAIPKLVRYLATECPSLQINAVTTI-LNLSILEQNKTR--IMETDGAL 453
Query: 243 EGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDK 297
GVI++L++ +++ LF+L V R + G +V L D K
Sbjct: 454 NGVIEVLRSGATWEAKANAAA-TLFSLAGVSAYRRRL---GRKARVVSGLVDLAK 504
>TAIR|locus:2032472 [details] [associations]
symbol:AT1G24330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005871 "kinesin complex" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0009507 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AC002396
HSSP:Q8VZ40 eggNOG:NOG251146 HOGENOM:HOG000082565
ProtClustDB:CLSN2679347 IPI:IPI00520534 PIR:T00664
RefSeq:NP_173843.2 UniGene:At.41444 ProteinModelPortal:O48700
SMR:O48700 PaxDb:O48700 PRIDE:O48700 EnsemblPlants:AT1G24330.1
GeneID:839049 KEGG:ath:AT1G24330 TAIR:At1g24330 InParanoid:O48700
OMA:RILMGAN PhylomeDB:O48700 Genevestigator:O48700 Uniprot:O48700
Length = 771
Score = 197 (74.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 39/103 (37%), Positives = 61/103 (59%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ +CP T+ L +L PN+ ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 75 RLIQDWCVANRSFGVQRIPT-PKQPAEPSLVRTLLNQASSESN 116
LI WC N G+ +PT P + + + R ++ + S ++
Sbjct: 336 GLIASWCEQN---GIT-VPTGPPESLDLNYWRLAMSDSESPNS 374
Score = 52 (23.4 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 22/102 (21%), Positives = 42/102 (41%)
Query: 245 VIDILKNLSSYPRGLKV--GIKALFALCLVKQTRYKAVAA-GAAETLVDRLADFDKCDAE 301
+I L+ L+S L + + L L ++ + + + G TL L D + E
Sbjct: 594 IIKSLQVLASTGNHLWIEKSLAVLLNLASSREGKEEMITTQGMISTLATVLDTGDTVEQE 653
Query: 302 RALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
+A++ + +LC C + +P LV + S R +
Sbjct: 654 QAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRD 695
Score = 37 (18.1 bits), Expect = 6.9e-12, Sum P(2) = 6.9e-12
Identities = 18/70 (25%), Positives = 31/70 (44%)
Query: 172 ESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQEL 231
++++ LV+ C+++ I SL S+ + S R S L+ + R Q
Sbjct: 654 QAVSCLVILCTGSESCIQMVLQEGVIPSLVSISVNGSPRGRDKSQKLLML----FREQRH 709
Query: 232 RAQIS-NLDE 240
R Q S N +E
Sbjct: 710 RDQPSPNKEE 719
>TAIR|locus:2194564 [details] [associations]
symbol:PUB18 "plant U-box 18" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA;IDA] [GO:0010029 "regulation of seed
germination" evidence=IGI] InterPro:IPR001841 InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564
PROSITE:PS50176 SMART:SM00184 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842
EMBL:AC007067 GO:GO:0000151 HOGENOM:HOG000238412 HSSP:Q8VZ40
EMBL:AY075683 IPI:IPI00537444 PIR:B86239 RefSeq:NP_172526.1
UniGene:At.14982 ProteinModelPortal:Q9XIJ5 SMR:Q9XIJ5 PRIDE:Q9XIJ5
EnsemblPlants:AT1G10560.1 GeneID:837597 KEGG:ath:AT1G10560
TAIR:At1g10560 eggNOG:NOG251934 InParanoid:Q9XIJ5 OMA:EPSSKHR
PhylomeDB:Q9XIJ5 ProtClustDB:CLSN2679599 Genevestigator:Q9XIJ5
Uniprot:Q9XIJ5
Length = 697
Score = 204 (76.9 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 82/304 (26%), Positives = 134/304 (44%)
Query: 20 CPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQD 79
CPISLE+M DPV + TG TYDR SI W +GN TCP+T LT L+ N ++R++I+
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 80 WCVANRSF--GVQRIPTPKQPAEP-SLVRTLLNQASSESNTYXXXXXXXXXXXXXXXDSD 136
C N G+ R P SL + ++ T +
Sbjct: 354 HCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREI- 412
Query: 137 KNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTE--TECMEIASDA 194
+ ++ SS N ++ T + +K SS ++ + A+ + L++ T +IA +
Sbjct: 413 RVQTKTSSFNRSCLVKAGAVTPL-LKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEG 471
Query: 195 DKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSS 254
KI + L + E R+ SA+ + L+ + R N D I G+++I+K
Sbjct: 472 LKIL-VEILNEGAKTETRLYSASAL-FYLSSVEDYS-RLIGENPDAI-PGLMNIVKGDDY 527
Query: 255 YPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERA--LATVELLCR 312
+ + A+ L + ++ +AAGA L+D L + A LAT+ L
Sbjct: 528 GDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSGEISGGLTADCLATLAKLAE 587
Query: 313 IPAG 316
P G
Sbjct: 588 YPDG 591
>TAIR|locus:2045334 [details] [associations]
symbol:PUB4 "plant U-box 4" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR000225
InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 EMBL:CP002685 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 IPI:IPI00532127
RefSeq:NP_179895.6 UniGene:At.39339 ProteinModelPortal:F4ILG6
SMR:F4ILG6 PRIDE:F4ILG6 EnsemblPlants:AT2G23140.1 GeneID:816846
KEGG:ath:AT2G23140 OMA:WRRPSER Uniprot:F4ILG6
Length = 829
Score = 205 (77.2 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 44/107 (41%), Positives = 62/107 (57%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
SV I F CP+SLE+M DPV V +GQTY++ I+ W+ G CP TR LT TLIPN
Sbjct: 230 SVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPN 289
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNT 117
+T++ LI +WC N ++P P + + + LL+ S +T
Sbjct: 290 YTVKALIANWCETNDV----KLPDPNKSTSLNELSPLLSCTDSIPST 332
Score = 141 (54.7 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 80/331 (24%), Positives = 133/331 (40%)
Query: 53 TTCPVTRSPLTDFTLIPNHTLRRLI-QDWCVANRSFGVQRIPTPKQPAEPSL--VRTLLN 109
TT TR L+DF+ P RR Q W + G + + P L V T +
Sbjct: 490 TTSAATRRDLSDFS--PKFMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVK 547
Query: 110 QASSE--SNTYXXXXXXXXXXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSP 167
+ E S++ + NR +I + +L ++ ++ T S+
Sbjct: 548 KLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYS-----TDSAT 602
Query: 168 ELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMR 227
+ ++ L+ + + IA DA I L +L + S E + NSAA + L+ +
Sbjct: 603 Q--ENAVTALLNLSINDNNKKAIA-DAGAIEPLIHVLENGSSEAKENSAATL-FSLSVI- 657
Query: 228 SQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAET 287
+E + +I I ++D+L N PRG K ALF L + ++ + V +GA
Sbjct: 658 -EENKIKIGQSGAIGP-LVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRY 713
Query: 288 LVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYXXX 347
L+D L D ++A+A + L IP G + +PLLV+ + S R E
Sbjct: 714 LID-LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAA 771
Query: 348 XXXXXXXXXERCQRDAVSAGVLTQLLLLVQS 378
R + G + L+ L QS
Sbjct: 772 ALLQLSTNSGRFCNMVLQEGAVPPLVALSQS 802
>TAIR|locus:2010424 [details] [associations]
symbol:PUB45 "plant U-box 45" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069471
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AY094469 EMBL:BT002721 EMBL:AK230080
IPI:IPI00517206 PIR:D86404 RefSeq:NP_174112.1 UniGene:At.22435
ProteinModelPortal:Q9C7G1 SMR:Q9C7G1 PRIDE:Q9C7G1
EnsemblPlants:AT1G27910.1 GeneID:839684 KEGG:ath:AT1G27910
TAIR:At1g27910 eggNOG:NOG251146 HOGENOM:HOG000082565
InParanoid:Q9C7G1 OMA:SENMSIP PhylomeDB:Q9C7G1
ProtClustDB:CLSN2679347 Genevestigator:Q9C7G1 Uniprot:Q9C7G1
Length = 768
Score = 201 (75.8 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 41/99 (41%), Positives = 56/99 (56%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ TCP T L+ L PN+ ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 75 RLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASS 113
LI WC N GVQ P + + + R L+ + S
Sbjct: 340 ALISSWCEQN---GVQVPDGPPESLDLNYWRLALSVSES 375
Score = 46 (21.3 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 21/102 (20%), Positives = 47/102 (46%)
Query: 245 VIDILKNL--SSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADF-DKCDAE 301
+++ L++L S R + + L L L + + + V+A + + + + D + + E
Sbjct: 592 LVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTILDTGEPNEQE 651
Query: 302 RALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATE 343
+A++ + +LC C+E +P LV + + R E
Sbjct: 652 QAVSLLLILCNHSEICSEMVLQEGVIPSLVSISVNGTQRGRE 693
Score = 43 (20.2 bits), Expect = 5.6e-13, Sum P(2) = 5.6e-13
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 146 NVRAILSQVFFTNINVKTASSPEL-AHESLALLVMFPLTETECMEIASDADKITSLSSLL 204
N+ +LS + T S + +SLA+L+ L E E+ S +++L ++L
Sbjct: 583 NIPCLLSADLVNALQSLTISDEQRWTEKSLAVLLNLVLNEAGKDEMVSAPSLVSNLCTIL 642
Query: 205 FHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLS 253
+ + +L+ ++L ++I + + EGVI L ++S
Sbjct: 643 DTGEPNEQEQAVSLL-LILCN------HSEICSEMVLQEGVIPSLVSIS 684
>TAIR|locus:2152049 [details] [associations]
symbol:AT5G65920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR EMBL:AL021684 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 EMBL:AB018108
HSSP:Q8VZ40 HOGENOM:HOG000077474 ProtClustDB:CLSN2686657
EMBL:AY062476 EMBL:AY093259 IPI:IPI00534056 PIR:T05882
RefSeq:NP_201393.1 UniGene:At.27331 UniGene:At.74058
ProteinModelPortal:Q9FHN9 SMR:Q9FHN9 EnsemblPlants:AT5G65920.1
GeneID:836721 KEGG:ath:AT5G65920 TAIR:At5g65920 eggNOG:NOG268350
InParanoid:Q9FHN9 OMA:CKLASEE PhylomeDB:Q9FHN9
Genevestigator:Q9FHN9 Uniprot:Q9FHN9
Length = 444
Score = 196 (74.1 bits), Expect = 7.4e-13, P = 7.4e-13
Identities = 63/216 (29%), Positives = 100/216 (46%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
+ L+L +IP F CPISLE M DPVT+CTGQTY+R +I W G+ TCP T L D
Sbjct: 52 ISELELP-EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWD 110
Query: 65 FTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXX 124
+ PN TL +LI W + + +++ Q ++ TL +A ++ +
Sbjct: 111 DLVTPNKTLHQLIYTW-FSQKYVLMKKRSEDVQGRAIEILGTL-RKAKGKAKVHALSELK 168
Query: 125 XXXXXXXXXDSDKNRSLISSHNVRAILSQVF-FTNINVKTASSPELAHESLALLVMFPLT 183
++++ V I S + FT S + E++A+LV L
Sbjct: 169 QVVMAHAIA----KKTVVDEGGVFVISSLLSPFT--------SHAVGSEAIAILVNLELD 216
Query: 184 ETECMEIASDADKITSLSSLLFHSSIEVRVNSAALI 219
+ A +++ + +L SIE ++N A LI
Sbjct: 217 SDSKAGLMQPA-RVSLMVDMLNDGSIETKINCARLI 251
Score = 183 (69.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 60/248 (24%), Positives = 116/248 (46%)
Query: 139 RSLISSHNV--RAILSQ--VFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASDA 194
+ ++ +H + + ++ + VF + + +S + E++A+LV L + A
Sbjct: 168 KQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDSKAGLMQPA 227
Query: 195 DKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSS 254
+++ + +L SIE ++N A LI ++ + RA++ + + G++ ++K+
Sbjct: 228 -RVSLMVDMLNDGSIETKINCARLIGRLV---EEKGFRAELVSSHSLLVGLMRLVKDRRR 283
Query: 255 YPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFD-KCDAERALATVELLCRI 313
G+ + L ++ + KQ R V GA LVD L D +C E AL ++ LC
Sbjct: 284 R-NGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVEC-LESALFVLDSLCLE 341
Query: 314 PAGCAEFAEHALTVPLLVKTILKISDRATEYXXXXXXXX-XXXXERCQRDAVSAGVLTQL 372
G + T+P V+ ++K+S++ T Y E C AV G+ +L
Sbjct: 342 SEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVEVGLAAKL 401
Query: 373 LLLVQSDC 380
LL++QS C
Sbjct: 402 LLVIQSGC 409
>TAIR|locus:2146198 [details] [associations]
symbol:AT5G18330 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR016024
Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00538442 RefSeq:NP_197334.1
UniGene:At.54898 ProteinModelPortal:Q3E9F6 SMR:Q3E9F6
EnsemblPlants:AT5G18330.1 GeneID:831951 KEGG:ath:AT5G18330
TAIR:At5g18330 eggNOG:NOG311548 InParanoid:Q3E9F6 OMA:HERTCPR
PhylomeDB:Q3E9F6 Genevestigator:Q3E9F6 Uniprot:Q3E9F6
Length = 445
Score = 196 (74.1 bits), Expect = 7.5e-13, P = 7.5e-13
Identities = 66/287 (22%), Positives = 128/287 (44%)
Query: 9 DLS-VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTL 67
D+S V++P F C +S ++M +P+ + +GQT+++ I W+ TCP T+ L +
Sbjct: 59 DISPVEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLKH-ERTCPRTKQVLYHRFM 117
Query: 68 IPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXX 127
IPNH + +I++WC+ + +F + + +LL + SS S+
Sbjct: 118 IPNHLINEVIKEWCLIH-NFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKEL 176
Query: 128 XXXXXXDSDKNRSLISSHNVRAILSQV--FFTNINVKTASSPELAHESLALLVMFPLTET 185
K S + + V I + T +++ S+PE + L +F +E
Sbjct: 177 ALKA-----KRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIFSTSEK 231
Query: 186 ECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGV 245
+A + + L+ + ++ R++SAA + L+ S ++ I N E+ + +
Sbjct: 232 NKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVNS-LSYTDSNKII--IGN-SEVLKAL 287
Query: 246 IDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRL 292
I +++ S AL LC VK+ KAV+ G + ++
Sbjct: 288 IHVIEEGDSL--ATSEAFSALSNLCPVKEISEKAVSEGLIRAAIKKI 332
>TAIR|locus:2146213 [details] [associations]
symbol:AT5G18340 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 InterPro:IPR016024 Pfam:PF04564
PROSITE:PS50176 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC051626 HOGENOM:HOG000238412
ProtClustDB:CLSN2686550 IPI:IPI00517179 RefSeq:NP_197335.1
UniGene:At.54899 ProteinModelPortal:Q3E9F5 SMR:Q3E9F5
EnsemblPlants:AT5G18340.1 GeneID:831952 KEGG:ath:AT5G18340
TAIR:At5g18340 eggNOG:NOG267360 InParanoid:Q3E9F5 OMA:ISPHERV
PhylomeDB:Q3E9F5 Genevestigator:Q3E9F5 Uniprot:Q3E9F5
Length = 456
Score = 184 (69.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 70/294 (23%), Positives = 119/294 (40%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
SV++P F+C +S +M DPV + +GQTY++ I W+ + TCP + L L PN
Sbjct: 71 SVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL-NHDLTCPTAKQVLYRVCLTPN 129
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLV--------RTLLNQASSESNTYXXXX 122
H + LI WC+AN+ R P PK P++ V +LL + SS S++
Sbjct: 130 HLINELITRWCLANK---YDR-PAPK-PSDIDYVTELFTDGIESLLQRISSPSSSVADQT 184
Query: 123 XXXXXXXXXXXDSDKNRSLISSHNVRAILSQVFFTNINV---KTASSPELAHESLALLVM 179
R +I T ++V + S+PEL + L
Sbjct: 185 EAAKELALQTEKFVNVRDFFIKELPDSITR--LLTPLSVLGDEVDSNPELQENIVTALFN 242
Query: 180 FPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLD 239
E +A + I L+ + S+ R N+ + LA + + I
Sbjct: 243 MSTFEKNKTVLAENHQVIPLLAKSMKQGSVVTRRNAT----LTLASLSDIDSNKIIIGNS 298
Query: 240 EIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYK-AVAAGAAETLVDRL 292
+ +ID++ L + A+ LC ++ +K A++ G A + +
Sbjct: 299 VALKALIDLIGELDDLS-ATHDALCAVIDLCCDERENWKKAISLGLAPAAIKNI 351
>TAIR|locus:2115365 [details] [associations]
symbol:AT4G36550 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] [GO:0001666 "response to hypoxia" evidence=RCA]
[GO:0009862 "systemic acquired resistance, salicylic acid mediated
signaling pathway" evidence=RCA] [GO:0010310 "regulation of
hydrogen peroxide metabolic process" evidence=RCA] [GO:0031347
"regulation of defense response" evidence=RCA] InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002687 GenomeReviews:CT486007_GR
SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 EMBL:AL161589
GO:GO:0000151 EMBL:Z99708 HSSP:Q8VZ40 IPI:IPI00536151 PIR:E85431
RefSeq:NP_195373.6 UniGene:At.31319 ProteinModelPortal:O23225
SMR:O23225 GeneID:829807 KEGG:ath:AT4G36550 TAIR:At4g36550
eggNOG:NOG316001 HOGENOM:HOG000241850 InParanoid:O23225 OMA:CERIRDS
ArrayExpress:O23225 Genevestigator:O23225 Uniprot:O23225
Length = 718
Score = 179 (68.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
+P F+C +S +M DPV + +G T++R I+ W GN +CP+++ L DFTL PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 74 RRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTY 118
+ I +WC N VQ P K + + ++ AS S+ Y
Sbjct: 279 KSQISEWCAKN-GLDVQD-PARKHVKASNSIDFSVSIASFGSSLY 321
Score = 52 (23.4 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 15/76 (19%), Positives = 39/76 (51%)
Query: 167 PELAHESLALLVMFPLTETE--CMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLA 224
PE ++++L+ + + E C+ + D +SL + + + EV+V+++ L+ ++
Sbjct: 598 PEEQENAISILLQLCVQKIEYCCLVVREATDIYSSLILISNNGTEEVKVSASELLRALVE 657
Query: 225 GMRSQELRAQISNLDE 240
+E ++S+ E
Sbjct: 658 VDSDKEEEEEVSSRPE 673
Score = 40 (19.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
Identities = 27/126 (21%), Positives = 54/126 (42%)
Query: 139 RSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASDADKIT 198
RS+ S + +++ + N + ++ E+ L LL+ F +E S +++
Sbjct: 411 RSMSPSKFLEPLIT--YLKNALERNGTAGEIIKGGLDLLLAFLSGNRRAIE--SLEEEVF 466
Query: 199 SLSSLLFHSSI--EVRVNSAALI--------EIVLAGMRSQELRAQISNLDEIFEGVIDI 248
+ S+ S + E +N ++ +I +G S L+ S + + E +
Sbjct: 467 KMFSVFLESEVVAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMIT 526
Query: 249 LKNLSS 254
LKNLSS
Sbjct: 527 LKNLSS 532
Score = 38 (18.4 bits), Expect = 5.2e-10, Sum P(2) = 5.2e-10
Identities = 14/60 (23%), Positives = 32/60 (53%)
Query: 241 IFEGVIDILKNLSSYPRG-LKVGIK-ALFALCLVKQTRYKAVAAGAAETLVDRLADFDKC 298
+ E ++IL+ LS++P G K+ +L +L + +++ + + A TL + + + C
Sbjct: 478 VAEEALNILEVLSNHPHGPSKITSSGSLSSLLKIVESQAEHLQEQAMITLKNLSSSMEIC 537
>TAIR|locus:2198190 [details] [associations]
symbol:PUB54 "plant U-box 54" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR003613 InterPro:IPR006016
Pfam:PF00582 Pfam:PF04564 SMART:SM00504 UniPathway:UPA00143
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0006950
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
IPI:IPI00532514 PIR:F86147 RefSeq:NP_171674.2 UniGene:At.42636
ProteinModelPortal:Q9LQ92 SMR:Q9LQ92 EnsemblPlants:AT1G01680.1
GeneID:839251 KEGG:ath:AT1G01680 TAIR:At1g01680 eggNOG:NOG331289
HOGENOM:HOG000115795 InParanoid:Q9LQ92 OMA:RDICINK PhylomeDB:Q9LQ92
ProtClustDB:CLSN2917980 Genevestigator:Q9LQ92 Uniprot:Q9LQ92
Length = 308
Score = 175 (66.7 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 18 FRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLI 77
F+CPIS+E+M DP G TY+ W+ +G T P T PL + L+PNHTLR +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 78 QDWCVANRSF 87
+DW N ++
Sbjct: 297 KDWLEKNPNY 306
>TAIR|locus:2144261 [details] [associations]
symbol:AT5G11550 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR016024 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL163815 EMBL:BT002981 EMBL:BT004426
IPI:IPI00544497 PIR:T48514 RefSeq:NP_196716.1 UniGene:At.32242
ProteinModelPortal:Q9LYD7 SMR:Q9LYD7 IntAct:Q9LYD7 PRIDE:Q9LYD7
EnsemblPlants:AT5G11550.1 GeneID:831027 KEGG:ath:AT5G11550
TAIR:At5g11550 eggNOG:NOG235459 HOGENOM:HOG000241582
InParanoid:Q9LYD7 OMA:VEGMAGR PhylomeDB:Q9LYD7
ProtClustDB:CLSN2686626 ArrayExpress:Q9LYD7 Genevestigator:Q9LYD7
Uniprot:Q9LYD7
Length = 314
Score = 170 (64.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 38/104 (36%), Positives = 57/104 (54%)
Query: 241 IFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDA 300
+ G++ L++ + K K L ALCL + R+ AV AGAA +V+ A +
Sbjct: 142 LMRGLVSCLRSNNKIVTA-KYVTKILLALCLAEGNRHVAVEAGAARAVVETAAGLEISAV 200
Query: 301 ERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEY 344
ERALA +EL+C G AE HA+TVP +V + +++ R EY
Sbjct: 201 ERALAALELMCTTAEGAAEVRAHAMTVPAMVAVMARLAGRGREY 244
>TAIR|locus:2195563 [details] [associations]
symbol:PUB19 "plant U-box 19" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0010029 "regulation of seed germination" evidence=IGI]
InterPro:IPR001841 InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00184 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002684
GenomeReviews:CT485782_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0010029 GO:GO:0004842 GO:GO:0000151
EMBL:AC004473 HOGENOM:HOG000238412 HSSP:Q8VZ40 eggNOG:NOG251934
ProtClustDB:CLSN2679599 IPI:IPI00530780 PIR:T02271
RefSeq:NP_176225.1 UniGene:At.66059 ProteinModelPortal:O80742
SMR:O80742 PaxDb:O80742 PRIDE:O80742 EnsemblPlants:AT1G60190.1
GeneID:842314 KEGG:ath:AT1G60190 TAIR:At1g60190 InParanoid:O80742
OMA:TELHVAM PhylomeDB:O80742 Genevestigator:O80742 Uniprot:O80742
Length = 686
Score = 173 (66.0 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 32/66 (48%), Positives = 43/66 (65%)
Query: 19 RCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQ 78
RCPISLE+M DPV + +G TYDR SI W A+GN TCP T L L+ N +++++IQ
Sbjct: 283 RCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVIQ 342
Query: 79 DWCVAN 84
+ N
Sbjct: 343 SYSKQN 348
>TAIR|locus:2050659 [details] [associations]
symbol:AT2G45920 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AC004665
HSSP:Q8VZ40 HOGENOM:HOG000115794 ProtClustDB:CLSN2680474
EMBL:AK175182 EMBL:BT015764 EMBL:BT020181 IPI:IPI00546399
PIR:T02455 RefSeq:NP_182116.2 UniGene:At.22480
ProteinModelPortal:Q683D5 SMR:Q683D5 IntAct:Q683D5
EnsemblPlants:AT2G45920.1 GeneID:819200 KEGG:ath:AT2G45920
TAIR:At2g45920 eggNOG:NOG265582 InParanoid:Q683D5 OMA:ENRITES
PhylomeDB:Q683D5 Genevestigator:Q683D5 Uniprot:Q683D5
Length = 400
Score = 164 (62.8 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 32/75 (42%), Positives = 45/75 (60%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
+ P +F CPISLE+M DP G TY+ +I +W+ G+ T P+T + L L+PN
Sbjct: 324 EAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLVPNLA 383
Query: 73 LRRLIQDWCVANRSF 87
LR IQ+W A+ SF
Sbjct: 384 LRSAIQEWLHASSSF 398
>TAIR|locus:2101353 [details] [associations]
symbol:AT3G49060 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004713 "protein
tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0016301 "kinase
activity" evidence=ISS] [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AL132967
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004672 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40 EMBL:AY050369
EMBL:BT004526 EMBL:AK176246 EMBL:AK176327 EMBL:AK176453
EMBL:AK176423 IPI:IPI00530482 IPI:IPI00886501 PIR:T46124
RefSeq:NP_566915.1 UniGene:At.22745 ProteinModelPortal:Q94A51
SMR:Q94A51 PRIDE:Q94A51 EnsemblPlants:AT3G49060.1 GeneID:824068
KEGG:ath:AT3G49060 GeneFarm:1985 TAIR:At3g49060
HOGENOM:HOG000237993 InParanoid:Q94A51 OMA:MEINEAT PhylomeDB:Q94A51
ProtClustDB:CLSN2917392 Genevestigator:Q94A51 Uniprot:Q94A51
Length = 805
Score = 167 (63.8 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P H+ CPI E+M DP+ G TY+ +I W+A G+ T P+T + D LIPNH L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 75 RLIQDW 80
IQDW
Sbjct: 796 LAIQDW 801
>ZFIN|ZDB-GENE-061110-97 [details] [associations]
symbol:zgc:154085 "zgc:154085" species:7955 "Danio
rerio" [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 ZFIN:ZDB-GENE-061110-97 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 EMBL:CABZ01026183 EMBL:CABZ01026184 EMBL:CABZ01048063
EMBL:CABZ01048064 EMBL:FP236277 IPI:IPI00993801
Ensembl:ENSDART00000128024 ArrayExpress:E7F9P4 Bgee:E7F9P4
Uniprot:E7F9P4
Length = 487
Score = 160 (61.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P F CPI+ E+M DPV G +Y+R +IE+W++T N T P+T PL L PN TL+
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 75 RLIQDW 80
I W
Sbjct: 478 MAIFRW 483
>TAIR|locus:2176177 [details] [associations]
symbol:AT5G51270 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AB023044
HSSP:Q9WUD1 HOGENOM:HOG000237993 IPI:IPI00525770 RefSeq:NP_199940.1
UniGene:At.55484 ProteinModelPortal:Q9LU47 SMR:Q9LU47 PRIDE:Q9LU47
EnsemblPlants:AT5G51270.1 GeneID:835201 KEGG:ath:AT5G51270
GeneFarm:2016 TAIR:At5g51270 InParanoid:Q9LU47 OMA:ATHEAKE
PhylomeDB:Q9LU47 ProtClustDB:CLSN2916710 Genevestigator:Q9LU47
Uniprot:Q9LU47
Length = 819
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 31/68 (45%), Positives = 41/68 (60%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
Q P HF CP+ ++M +P G TYDR +IE W+ T+ PVT SPL + L+PNHT
Sbjct: 748 QPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWMENHRTS-PVTNSPLQNVNLLPNHT 806
Query: 73 LRRLIQDW 80
L I +W
Sbjct: 807 LYAAIVEW 814
>UNIPROTKB|Q5ZMC3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 PROSITE:PS50082 PROSITE:PS50105
PROSITE:PS50294 SMART:SM00320 SMART:SM00454 SMART:SM00504
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0004842 GeneTree:ENSGT00700000104017 GO:GO:0000151
HSSP:P16649 EMBL:AJ719461 IPI:IPI00588518 UniGene:Gga.5996
ProteinModelPortal:Q5ZMC3 Ensembl:ENSGALT00000020533
HOGENOM:HOG000231980 HOVERGEN:HBG080511 InParanoid:Q5ZMC3
OrthoDB:EOG4NCMCJ Uniprot:Q5ZMC3
Length = 476
Score = 158 (60.7 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 27/76 (35%), Positives = 44/76 (57%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
++ + + V +P F CPI+ ELM DPV G +Y++ ++E+W++ + P+T PL
Sbjct: 395 MKMVSVPVAVPDEFLCPITRELMKDPVIAADGYSYEKEAMENWISNNRRSSPMTNLPLPS 454
Query: 65 FTLIPNHTLRRLIQDW 80
L PN TL+ I W
Sbjct: 455 LVLTPNRTLKMAISRW 470
>TAIR|locus:2117343 [details] [associations]
symbol:AT4G25160 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0002238 "response
to molecule of fungal origin" evidence=RCA] InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00582 Pfam:PF04564 Pfam:PF07714 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 EMBL:AL161562 GO:GO:0004842 EMBL:AL035523
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 EMBL:AL035396
HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BX828107 IPI:IPI00540343
PIR:T05537 RefSeq:NP_194246.2 UniGene:At.32287
ProteinModelPortal:Q9SW11 SMR:Q9SW11 IntAct:Q9SW11 PaxDb:Q9SW11
PRIDE:Q9SW11 EnsemblPlants:AT4G25160.1 GeneID:828619
KEGG:ath:AT4G25160 GeneFarm:2015 TAIR:At4g25160 InParanoid:Q9SW11
OMA:FQQELEI PhylomeDB:Q9SW11 ProtClustDB:CLSN2918598
Genevestigator:Q9SW11 Uniprot:Q9SW11
Length = 835
Score = 160 (61.4 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
+S Q P HF CP+ ++M +P G TYDR +IE W+ NT+ P+T SPL L+P
Sbjct: 762 VSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS-PMTDSPLHSKNLLP 820
Query: 70 NHTLRRLIQDW 80
N+TL I +W
Sbjct: 821 NYTLYTAIMEW 831
>TAIR|locus:2198165 [details] [associations]
symbol:AT1G01660 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 eggNOG:KOG0167
HOGENOM:HOG000115794 IPI:IPI00527810 PIR:E86147 RefSeq:NP_171672.1
UniGene:At.51449 ProteinModelPortal:P0C6E7 SMR:P0C6E7 PRIDE:P0C6E7
EnsemblPlants:AT1G01660.1 GeneID:839461 KEGG:ath:AT1G01660
TAIR:At1g01660 InParanoid:P0C6E7 PhylomeDB:P0C6E7
ProtClustDB:CLSN2912787 Genevestigator:P0C6E7 Uniprot:P0C6E7
Length = 568
Score = 157 (60.3 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
Q P +F CPIS E+M +P G TY+ S+ W+ G+ T P+T L L+PNH
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHA 555
Query: 73 LRRLIQDWCVAN 84
LR IQ+W N
Sbjct: 556 LRSAIQEWLQRN 567
>TAIR|locus:2047605 [details] [associations]
symbol:AT2G19410 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 Pfam:PF04564
PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005524 EMBL:CP002685
GenomeReviews:CT485783_GR eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 HSSP:P36897 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AC003058 HOGENOM:HOG000237993
IPI:IPI00517039 PIR:T01289 RefSeq:NP_179531.1 UniGene:At.52830
ProteinModelPortal:Q8S8S7 SMR:Q8S8S7 PRIDE:Q8S8S7
EnsemblPlants:AT2G19410.1 GeneID:816460 KEGG:ath:AT2G19410
GeneFarm:2021 TAIR:At2g19410 InParanoid:Q8S8S7 OMA:VETANSK
PhylomeDB:Q8S8S7 ProtClustDB:CLSN2683172 Genevestigator:Q8S8S7
Uniprot:Q8S8S7
Length = 801
Score = 158 (60.7 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
+++ P H+ CPI E+M +P G TY+R +I +W+ N + PVTR L F L PN
Sbjct: 722 NLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPN 780
Query: 71 HTLRRLIQDW 80
HTLR I+DW
Sbjct: 781 HTLRSAIRDW 790
>TAIR|locus:2075457 [details] [associations]
symbol:AT3G02840 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0051707 "response to
other organism" evidence=ISS] [GO:0010193 "response to ozone"
evidence=IEP] [GO:0005634 "nucleus" evidence=IDA] [GO:0006612
"protein targeting to membrane" evidence=RCA] [GO:0006944 "cellular
membrane fusion" evidence=RCA] [GO:0009693 "ethylene biosynthetic
process" evidence=RCA] [GO:0010200 "response to chitin"
evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
response" evidence=RCA] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=RCA] [GO:0043069 "negative regulation of
programmed cell death" evidence=RCA] [GO:0050832 "defense response
to fungus" evidence=RCA] [GO:0052542 "defense response by callose
deposition" evidence=RCA] InterPro:IPR016024 GO:GO:0005634
GO:GO:0005737 EMBL:CP002686 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0010193 EMBL:AC018363 UniGene:At.41071
UniGene:At.48613 EMBL:BT002533 EMBL:BT008474 EMBL:AK118550
IPI:IPI00547655 RefSeq:NP_566184.1 ProteinModelPortal:Q9M8S5
STRING:Q9M8S5 EnsemblPlants:AT3G02840.1 GeneID:821225
KEGG:ath:AT3G02840 TAIR:At3g02840 OMA:RESVEGW PhylomeDB:Q9M8S5
ProtClustDB:CLSN2917076 ArrayExpress:Q9M8S5 Genevestigator:Q9M8S5
Uniprot:Q9M8S5
Length = 379
Score = 151 (58.2 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 71/298 (23%), Positives = 124/298 (41%)
Query: 94 TPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXXXXXDSDKNRSLISSHNVRAILSQ 153
TP+ E S R L N A+ E D++K + L+ + +V A+ S
Sbjct: 51 TPRDAVEIS--RRLQNAAAREEYAECLEIVSKIKNLGRGGDTNK-KCLVQNGSVLALSS- 106
Query: 154 VFFTNINVKTASSPELAHESLALLVMF-PLTETECMEIASDADKITSLSSLLFHSSIEVR 212
F L E L +L + PL +E + L L + R
Sbjct: 107 -CFERFAAARDGHMRLLEEILFVLSSWLPLNRSEGFNKMGSTASLNCLVRFLNGKDAKTR 165
Query: 213 VNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALF-ALCL 271
N+A I V+A + + + A +++++ EG++ I+++ S K + ++ A+
Sbjct: 166 QNAAFCIREVIA-VDKRYVYA-LTDVEGACEGLVKIIRDSVS-TSSTKASLMVIYRAISS 222
Query: 272 VKQTRYKAVAAGAAETLVDRLAD-FDKCDAERALATVELLCRIPAGCAEFAEHALTVPLL 330
+ K V G E + + + + +K ER+L + C G + +AL VPLL
Sbjct: 223 NDKITEKFVKLGLVELITEMMVNNAEKSVCERSLVVLNATCDNEQGKEDVLRNALIVPLL 282
Query: 331 VKTILKISDRATE------YXXXXXXXXXXXXERCQRDAVSAGVLTQLLLLVQSDCTD 382
VK IL++SD AT+ + +R +A+ G +LL+L+Q C D
Sbjct: 283 VKKILRVSDLATQCSVSILWKLWKNKKDGECDDRLLVEALQVGAFEKLLVLLQVGCED 340
>MGI|MGI:1919387 [details] [associations]
symbol:Wdsub1 "WD repeat, SAM and U-box domain containing 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0016567 "protein
ubiquitination" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 MGI:MGI:1919387 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:AK011391
EMBL:AL929242 EMBL:BC050792 EMBL:BC061948 IPI:IPI00132574
RefSeq:NP_001153108.1 RefSeq:NP_082394.1 UniGene:Mm.288734
UniGene:Mm.488684 ProteinModelPortal:Q9D0I6 SMR:Q9D0I6
PhosphoSite:Q9D0I6 PRIDE:Q9D0I6 Ensembl:ENSMUST00000028368
GeneID:72137 KEGG:mmu:72137 UCSC:uc008jto.2 InParanoid:Q9D0I6
NextBio:335536 Bgee:Q9D0I6 CleanEx:MM_WDSUB1 Genevestigator:Q9D0I6
Uniprot:Q9D0I6
Length = 474
Score = 152 (58.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
LS IP F CPI+ ELM DPV G +Y+R ++ESW+ T P+T L L P
Sbjct: 398 LSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTP 457
Query: 70 NHTLRRLIQDW 80
N TL+ I W
Sbjct: 458 NRTLKMAINRW 468
>RGD|1359296 [details] [associations]
symbol:Wdsub1 "WD repeat, sterile alpha motif and U-box domain
containing 1" species:10116 "Rattus norvegicus" [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 RGD:1359296 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GeneTree:ENSGT00700000104017
GO:GO:0000151 HSSP:Q8VZ40 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ CTD:151525 OMA:HCCCFSP EMBL:BC089856
IPI:IPI00391796 RefSeq:NP_001014201.1 UniGene:Rn.101918
ProteinModelPortal:Q5FVN8 PRIDE:Q5FVN8 Ensembl:ENSRNOT00000008168
GeneID:362137 KEGG:rno:362137 UCSC:RGD:1359296 InParanoid:Q5FVN8
NextBio:678784 ArrayExpress:Q5FVN8 Genevestigator:Q5FVN8
Uniprot:Q5FVN8
Length = 476
Score = 152 (58.6 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 31/71 (43%), Positives = 39/71 (54%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
LS IP F CPI+ ELM DPV G +Y+R ++ESW+ T P+T L L P
Sbjct: 400 LSSGIPDEFICPITRELMKDPVIASDGYSYEREAMESWIHKKKRTSPMTNLALPSLVLTP 459
Query: 70 NHTLRRLIQDW 80
N TL+ I W
Sbjct: 460 NRTLKMAINRW 470
>UNIPROTKB|F1MRF3 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525
EMBL:DAAA02004471 IPI:IPI00702869 RefSeq:XP_002685394.1
UniGene:Bt.105170 ProteinModelPortal:F1MRF3
Ensembl:ENSBTAT00000005476 GeneID:783784 KEGG:bta:783784
NextBio:20926301 Uniprot:F1MRF3
Length = 476
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
LS +IP F CPI+ ELM DP+ G +Y++ ++E+W++ T P+T L+ L P
Sbjct: 399 LSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTP 458
Query: 70 NHTLRRLIQDW 80
N TL+ I W
Sbjct: 459 NRTLKMAIDRW 469
>UNIPROTKB|G3MZA8 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR011510 InterPro:IPR015943
Pfam:PF00400 Pfam:PF04564 Pfam:PF07647 PROSITE:PS50082
PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320 SMART:SM00454
SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
Gene3D:3.30.40.10 InterPro:IPR013083 Gene3D:1.10.150.50
InterPro:IPR013761 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 OMA:HCCCFSP
EMBL:DAAA02004471 ProteinModelPortal:G3MZA8
Ensembl:ENSBTAT00000064632 Uniprot:G3MZA8
Length = 477
Score = 151 (58.2 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
LS +IP F CPI+ ELM DP+ G +Y++ ++E+W++ T P+T L+ L P
Sbjct: 400 LSSEIPDEFICPITRELMKDPIIASDGYSYEKEAMENWISRKKRTSPMTNLVLSSVILTP 459
Query: 70 NHTLRRLIQDW 80
N TL+ I W
Sbjct: 460 NRTLKMAIDRW 470
>TAIR|locus:504954932 [details] [associations]
symbol:AT5G57035 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 GO:GO:0005524
EMBL:CP002688 GO:GO:0006950 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 IPI:IPI00538382
RefSeq:NP_680448.2 UniGene:At.23555 UniGene:At.45477
ProteinModelPortal:F4K964 SMR:F4K964 EnsemblPlants:AT5G57035.1
GeneID:835807 KEGG:ath:AT5G57035 OMA:EYQRTGT PhylomeDB:F4K964
Uniprot:F4K964
Length = 789
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 28/70 (40%), Positives = 39/70 (55%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
+ + P H+ CPI E+M DP G TY+R +I+ W+ PVT+ L L PN
Sbjct: 705 NARAPTHYYCPILKEIMEDPQIAADGFTYERKAIKEWIQKHQDVSPVTKHRLKHSDLTPN 764
Query: 71 HTLRRLIQDW 80
HTLR I++W
Sbjct: 765 HTLRSAIREW 774
>UNIPROTKB|E2QX39 [details] [associations]
symbol:WDSUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001660 InterPro:IPR001680
InterPro:IPR003613 InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 Gene3D:3.30.40.10 InterPro:IPR013083
Gene3D:1.10.150.50 InterPro:IPR013761 InterPro:IPR021129
Pfam:PF00536 SUPFAM:SSF47769 GO:GO:0004842
GeneTree:ENSGT00700000104017 GO:GO:0000151 CTD:151525 OMA:HCCCFSP
EMBL:AAEX03017692 RefSeq:XP_535926.3 Ensembl:ENSCAFT00000039730
GeneID:478761 KEGG:cfa:478761 NextBio:20854042 Uniprot:E2QX39
Length = 476
Score = 148 (57.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
LS IP F CPI+ ELM DPV G +Y++ ++E+W++ T P+T L L P
Sbjct: 400 LSSGIPDEFLCPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLILPSMVLTP 459
Query: 70 NHTLRRLIQDW 80
N TL+ I W
Sbjct: 460 NRTLKMAISRW 470
>TAIR|locus:2100372 [details] [associations]
symbol:PUB39 "PLANT U-BOX 39" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005871 "kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002686
GenomeReviews:BA000014_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AL049746 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
HOGENOM:HOG000239874 ProtClustDB:CLSN2719312 EMBL:AY091018
EMBL:BT020355 IPI:IPI00534988 PIR:T07721 RefSeq:NP_190366.1
UniGene:At.35768 ProteinModelPortal:Q9STT1 SMR:Q9STT1 PaxDb:Q9STT1
PRIDE:Q9STT1 EnsemblPlants:AT3G47820.1 GeneID:823936
KEGG:ath:AT3G47820 TAIR:At3g47820 eggNOG:NOG271898
InParanoid:Q9STT1 OMA:ARENCVG PhylomeDB:Q9STT1
Genevestigator:Q9STT1 Uniprot:Q9STT1
Length = 509
Score = 110 (43.8 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 27/75 (36%), Positives = 39/75 (52%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLT-DF-TLIPN 70
+ P F CPI+ LM DPV V +GQT++R S++ V + P D T+IPN
Sbjct: 9 ETPTEFLCPITGFLMSDPVVVASGQTFERISVQ--VCRNLSFAPKLHDGTQPDLSTVIPN 66
Query: 71 HTLRRLIQDWCVANR 85
++ I WC N+
Sbjct: 67 LAMKSTILSWCDRNK 81
Score = 82 (33.9 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
Identities = 45/176 (25%), Positives = 80/176 (45%)
Query: 162 KTASSPELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIE-VRVNSAALIE 220
K S + HE + + E I+ D+I SL L S V+ N+AA I
Sbjct: 191 KLTSVDTIDHEQGLIQLRKTTRSNETTRISLCTDRILSLLRSLIVSRYNIVQTNAAASI- 249
Query: 221 IVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAV 280
+ L+ + +L+ S + +ID+LK+ S+ + +G ALF+L + ++ +
Sbjct: 250 VNLSLEKPNKLKIVRSGFVPL---LIDVLKSGSTEAQEHVIG--ALFSLAVEEENKMVIG 304
Query: 281 AAGAAETLVDRL--ADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTI 334
GA E L+ L ++ ++ + ALA L IP + + A VP+++ I
Sbjct: 305 VLGAVEPLLHALRSSESERARQDAALALYHLSL-IPNNRSRLVK-AGAVPMMLSMI 358
Score = 56 (24.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 22/77 (28%), Positives = 36/77 (46%)
Query: 243 EGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAER 302
E ++ L++ S R + AL+ L L+ R + V AGA ++ + + A R
Sbjct: 310 EPLLHALRSSES-ERARQDAALALYHLSLIPNNRSRLVKAGAVPMMLSMIRSGES--ASR 366
Query: 303 ALATVELLCRIPAGCAE 319
L LLC + A C+E
Sbjct: 367 ILL---LLCNL-AACSE 379
>UNIPROTKB|Q8N9V3 [details] [associations]
symbol:WDSUB1 "WD repeat, SAM and U-box domain-containing
protein 1" species:9606 "Homo sapiens" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] InterPro:IPR017986 InterPro:IPR001660
InterPro:IPR001680 InterPro:IPR003613 InterPro:IPR011510
InterPro:IPR015943 Pfam:PF00400 Pfam:PF04564 Pfam:PF07647
PROSITE:PS50082 PROSITE:PS50105 PROSITE:PS50294 SMART:SM00320
SMART:SM00454 SMART:SM00504 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 Gene3D:3.30.40.10
InterPro:IPR013083 Gene3D:1.10.150.50 InterPro:IPR013761
SUPFAM:SSF47769 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:AC009307 HOGENOM:HOG000231980 HOVERGEN:HBG080511
OrthoDB:EOG4NCMCJ EMBL:AK093494 EMBL:AC008277 EMBL:BC029520
IPI:IPI00167822 IPI:IPI00477952 RefSeq:NP_001121684.1
RefSeq:NP_689741.2 UniGene:Hs.20848 ProteinModelPortal:Q8N9V3
SMR:Q8N9V3 PhosphoSite:Q8N9V3 DMDM:229463016 PaxDb:Q8N9V3
PRIDE:Q8N9V3 Ensembl:ENST00000358147 Ensembl:ENST00000359774
Ensembl:ENST00000392796 Ensembl:ENST00000409990 GeneID:151525
KEGG:hsa:151525 UCSC:uc010foo.3 CTD:151525 GeneCards:GC02M160092
HGNC:HGNC:26697 HPA:HPA036840 neXtProt:NX_Q8N9V3
PharmGKB:PA128394761 InParanoid:Q8N9V3 OMA:HCCCFSP PhylomeDB:Q8N9V3
GenomeRNAi:151525 NextBio:86717 ArrayExpress:Q8N9V3 Bgee:Q8N9V3
CleanEx:HS_WDSUB1 Genevestigator:Q8N9V3 Uniprot:Q8N9V3
Length = 476
Score = 146 (56.5 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
LS IP F CPI+ ELM DPV G +Y++ ++E+W++ T P+T L L P
Sbjct: 400 LSSGIPDEFICPITRELMKDPVIASDGYSYEKEAMENWISKKKRTSPMTNLVLPSAVLTP 459
Query: 70 NHTLRRLIQDW 80
N TL+ I W
Sbjct: 460 NRTLKMAINRW 470
>TAIR|locus:2173742 [details] [associations]
symbol:AT5G40140 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF00514 Pfam:PF04564 PROSITE:PS50176
SMART:SM00185 SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 EMBL:AB010699 HSSP:Q8VZ40
eggNOG:NOG286330 HOGENOM:HOG000239874 IPI:IPI00517649
RefSeq:NP_198830.1 UniGene:At.55272 ProteinModelPortal:Q9FL17
SMR:Q9FL17 PRIDE:Q9FL17 EnsemblPlants:AT5G40140.1 GeneID:834011
KEGG:ath:AT5G40140 TAIR:At5g40140 InParanoid:Q9FL17 OMA:VLLILCN
Genevestigator:Q9FL17 Uniprot:Q9FL17
Length = 550
Score = 142 (55.0 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 81/300 (27%), Positives = 120/300 (40%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDF-TLIPNH 71
+IP F CPIS LM DP+ V +G +Y+R + +A T T +P DF T+IPN
Sbjct: 57 EIPAEFLCPISGSLMADPIIVSSGHSYERACV---IAC--KTLGFTPTPPPDFSTVIPNL 111
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXXXXX 131
L+ I WC R F P PK P LN A++E
Sbjct: 112 ALKSAIHSWC-ERRCF-----PPPK----P------LNSAAAEKLILALMEKKPQRRKVS 155
Query: 132 XXDSDKNRSLISSHNVRAILSQVFFTNI-NVKTASSPELAHESLALLVMFPLTETECMEI 190
+ + +++ +VR + N +SS E S L + T+ C
Sbjct: 156 VSEKELIQAIRDKPSVRLNHAATELDRRPNYFNSSSDESIASSSRTLQL--TTKPSCFSS 213
Query: 191 ASDADKITSLSSLLFHSS----IEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVI 246
S + I SL L +++ N + IE L +R + S + VI
Sbjct: 214 PSSGE-IESLEPNLTPEEEALLTKLKSNRISEIEEALISIRRITRIDESSRISLCTTRVI 272
Query: 247 DILKNL--SSYPRGLKVGIKALFA-LCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERA 303
LK+L S Y ++V + A+ L L K + K V +G L+D L KC + A
Sbjct: 273 SALKSLIVSRYAT-VQVNVTAVLVNLSLEKSNKVKIVRSGIVPPLIDVL----KCGSVEA 327
>TAIR|locus:2154124 [details] [associations]
symbol:AT5G62560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005871
"kinesin complex" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0019894 "kinesin binding"
evidence=IEA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 EMBL:AB015469 GO:GO:0000151 HOGENOM:HOG000239874
ProtClustDB:CLSN2719312 EMBL:AY128369 EMBL:BT000351 EMBL:AK227203
IPI:IPI00530696 RefSeq:NP_201062.1 UniGene:At.29043
ProteinModelPortal:Q0WUF6 SMR:Q0WUF6 PaxDb:Q0WUF6 PRIDE:Q0WUF6
EnsemblPlants:AT5G62560.1 GeneID:836376 KEGG:ath:AT5G62560
TAIR:At5g62560 eggNOG:NOG313122 InParanoid:Q0WUF6 OMA:FERACIQ
PhylomeDB:Q0WUF6 Genevestigator:Q0WUF6 Uniprot:Q0WUF6
Length = 559
Score = 107 (42.7 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 31/88 (35%), Positives = 47/88 (53%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPV--TRSPLTDFTLIPN 70
+ P F CPI+ LM DPV V +GQT++R S++ G + TR L+ T+IPN
Sbjct: 30 ETPPEFLCPITGFLMSDPVVVSSGQTFERLSVQVCRNLGYIPDLLDGTRPDLS--TVIPN 87
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPKQP 98
++ I WC +R Q++ P+ P
Sbjct: 88 LAMKSTIFSWC--DR----QKVDHPRPP 109
Score = 77 (32.2 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 42/167 (25%), Positives = 77/167 (46%)
Query: 171 HESLALLVMFPLTETECMEIASDADKITS-LSSLLFHSSIEVRVNSAALIEIVLAGMRSQ 229
HE +L+ +E + ++ D+I S L SLL V+ N+AA + + L+ +
Sbjct: 251 HEQGLILLRKMTRSSEDLRVSLCTDRILSFLRSLLVSRYNLVQTNAAASV-VNLSLEKQN 309
Query: 230 ELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLV 289
+++ S + +ID+LK+ ++ + G ALF+L L + + GA E L+
Sbjct: 310 KVKIVRSGFVPL---LIDVLKSGTTEAQEHVAG--ALFSLALEDENKMVIGVLGAVEPLL 364
Query: 290 DRL--ADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTI 334
L ++ ++ + ALA L IP+ A VP L+ +
Sbjct: 365 HALRSSESERARQDAALALYHLSL-IPSNRTRLVR-AGAVPTLLSMV 409
Score = 55 (24.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 22/77 (28%), Positives = 35/77 (45%)
Query: 243 EGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAER 302
E ++ L++ S R + AL+ L L+ R + V AGA TL+ + D R
Sbjct: 361 EPLLHALRSSES-ERARQDAALALYHLSLIPSNRTRLVRAGAVPTLLSMVRSGDS--TSR 417
Query: 303 ALATVELLCRIPAGCAE 319
L +LC + A C +
Sbjct: 418 ILL---VLCNL-AACPD 430
>TAIR|locus:2171810 [details] [associations]
symbol:PUB38 "plant U-box 38" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA;IDA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005871 "kinesin complex"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=IEA;IDA] [GO:0019894 "kinesin binding" evidence=IEA]
[GO:0070696 "transmembrane receptor protein serine/threonine kinase
binding" evidence=IPI] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 Pfam:PF04564 PROSITE:PS50176 SMART:SM00185
SMART:SM00504 UniPathway:UPA00143 EMBL:CP002688
GenomeReviews:BA000015_GR SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 EMBL:AB013395 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40
EMBL:BT015352 EMBL:BT015720 IPI:IPI00548483 RefSeq:NP_201323.1
UniGene:At.49809 ProteinModelPortal:Q9FJP6 SMR:Q9FJP6 STRING:Q9FJP6
PRIDE:Q9FJP6 EnsemblPlants:AT5G65200.1 GeneID:836643
KEGG:ath:AT5G65200 TAIR:At5g65200 eggNOG:NOG286330
HOGENOM:HOG000239874 InParanoid:Q9FJP6 OMA:RTRHDSA PhylomeDB:Q9FJP6
ProtClustDB:CLSN2719312 Genevestigator:Q9FJP6 Uniprot:Q9FJP6
Length = 556
Score = 137 (53.3 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 76/317 (23%), Positives = 119/317 (37%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSP---LTDFT-LI 68
Q P F CPIS +M DPV V +GQT++R ++ V P L DF+ +I
Sbjct: 32 QPPVEFLCPISKSVMSDPVVVSSGQTFERVCVQ--VCRDLNFIPKLNDDEESLPDFSNII 89
Query: 69 PNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYXXXXXXXXXX 128
PN ++ I WC + GV R P QP + S V +L Q +
Sbjct: 90 PNLNMKSTIDTWC---DTVGVSR-P---QPPDYSTVERILRQQMPPPDVEIRVSEQELLR 142
Query: 129 XXXXXDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECM 188
+I H ++ + F N + S +AH L PLT
Sbjct: 143 AVAH-----RAPMIIHHADSELMGRRDFNNSTTSSDESVIVAHSPFTPL---PLTTRPAC 194
Query: 189 EIASDADKITSLSSLLFHSSIEVRVNSAALI-EIVLAGMRSQELRAQISNL--------- 238
S + + + +L H+ ++A E++ ++S E+ Q L
Sbjct: 195 FSPSPSSSSSEIETLTHHTFFSNSTSTATEEDEVIYNKLKSSEIFDQEQGLIMMRKMTRT 254
Query: 239 -DEIFEG-----VIDILKNL--SSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVD 290
DE ++ +LKN+ S Y + +L L L K+ + V G L+D
Sbjct: 255 NDEARVSLCSPRILSLLKNMIVSRYSLVQTNALASLVNLSLDKKNKLTIVRLGFVPILID 314
Query: 291 RLADFDKCDAERALATV 307
L + E A T+
Sbjct: 315 VLKSGSREAQEHAAGTI 331
>TAIR|locus:2050669 [details] [associations]
symbol:AT2G45910 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
InterPro:IPR000719 InterPro:IPR003613 InterPro:IPR006016
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 Pfam:PF00582 Pfam:PF04564 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00504 UniPathway:UPA00143
GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.60.120.200
InterPro:IPR013320 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
EMBL:AC004665 HSSP:Q8VZ40 HOGENOM:HOG000237993 EMBL:BT002512
EMBL:AK227123 IPI:IPI00542046 PIR:T02456 RefSeq:NP_182115.2
UniGene:At.36571 ProteinModelPortal:Q8GUH1 SMR:Q8GUH1 PRIDE:Q8GUH1
EnsemblPlants:AT2G45910.1 GeneID:819199 KEGG:ath:AT2G45910
GeneFarm:1984 TAIR:At2g45910 InParanoid:Q8GUH1 OMA:KGTFAYM
PhylomeDB:Q8GUH1 ProtClustDB:CLSN2680270 Genevestigator:Q8GUH1
Uniprot:Q8GUH1
Length = 834
Score = 139 (54.0 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P +F CPI E+M DP G TY+ +I +W+ + + T P+T L+ +LI NH LR
Sbjct: 764 PPYFICPIFQEVMQDPHVAADGFTYEAEAIRAWLDSEHDTSPMTNVKLSHTSLIANHALR 823
Query: 75 RLIQDW 80
IQ+W
Sbjct: 824 SAIQEW 829
>TAIR|locus:2014584 [details] [associations]
symbol:PUB43 "plant U-box 43" species:3702 "Arabidopsis
thaliana" [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR000225 InterPro:IPR003613
InterPro:IPR016024 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 SUPFAM:SSF48371 Gene3D:1.25.10.10 InterPro:IPR011989
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC012394 GO:GO:0004842
GO:GO:0000151 UniGene:At.16778 UniGene:At.66969 HSSP:Q8VZ40
EMBL:AK226857 IPI:IPI00516849 PIR:E96791 RefSeq:NP_001077833.1
RefSeq:NP_177765.1 ProteinModelPortal:Q9SFX2 SMR:Q9SFX2
PaxDb:Q9SFX2 PRIDE:Q9SFX2 EnsemblPlants:AT1G76390.1
EnsemblPlants:AT1G76390.2 GeneID:843971 KEGG:ath:AT1G76390
TAIR:At1g76390 eggNOG:NOG276937 HOGENOM:HOG000241783
InParanoid:Q9SFX2 OMA:LTKQVMH PhylomeDB:Q9SFX2
ProtClustDB:CLSN2682757 Genevestigator:Q9SFX2 Uniprot:Q9SFX2
Length = 811
Score = 122 (48.0 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 26/72 (36%), Positives = 41/72 (56%)
Query: 18 FRCPISLELMCDPVTVCTGQTYDRPSIESWVA----TGNT-TCPVTRSPLTDFTLIPNHT 72
F CP++ ++M +PVT+ GQT++R +IE W G +CP+T L+ L P+
Sbjct: 29 FICPLTKQVMHNPVTLENGQTFEREAIEKWFQECRENGQPLSCPITSKELSITDLSPSIA 88
Query: 73 LRRLIQDWCVAN 84
LR I++W N
Sbjct: 89 LRNTIEEWRARN 100
Score = 62 (26.9 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 36/139 (25%), Positives = 61/139 (43%)
Query: 200 LSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVIDILKNLSSYP-RG 258
++ +L SS EVR + +++V+ G +E +A ++ D V I+K LS P +G
Sbjct: 151 ITDMLKSSSHEVRCKALQTLQVVVEG--DEESKAIVAEGDT----VRTIVKFLSQEPSKG 204
Query: 259 LKVGIKALFALCLVKQTRYKAVAA-GAAETLVDRLADFDK--CDAERALATVELLCRIPA 315
+ + LF L + K + GA LV + + E+A T+ L R
Sbjct: 205 REAAVSVLFELSKSEALCEKIGSIHGAIILLVGLTSSKSENVSTVEKADKTLTNLERSEE 264
Query: 316 GCAEFAEHALTVPLLVKTI 334
+ A + PLL K +
Sbjct: 265 NVRQMAINGRLQPLLAKLL 283
Score = 50 (22.7 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 19/100 (19%), Positives = 45/100 (45%)
Query: 136 DKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETECMEIASDAD 195
D ++ + H+ + ++ + + + + PE+ + LA+LV + + S
Sbjct: 392 DFDKVPVGPHHQTLVSEEIVENLLQLTSNTGPEIQGKLLAVLVGLTSCPNSVINVVSAIR 451
Query: 196 KITSLSSLL----FHSSIEVRVNSAALIEIVLAGMRSQEL 231
++ SL+ H + ++R+ S L+ + M S+EL
Sbjct: 452 NSAAIISLVQFVEIHENDDLRLASIKLLHNISPHM-SEEL 490
Score = 44 (20.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 200 LSSLLFHSSIEVRVNS---AALIEIVLAGMRSQELRAQISNLDEI--FEGVIDILKNLSS 254
L L ++ ++V V ++LI+++ SQ A + L+ I FEG +L N
Sbjct: 297 LGVLALNNDVKVIVAQTVGSSLIDLMRTRDMSQR-EAALGALNNISSFEGSAKLLINTGI 355
Query: 255 YPRGLKVGIKALFALCLVK-QTRYKAVAAGAAETLVDRLADFDK 297
P L IK LF + + R K V+A +V+ DFDK
Sbjct: 356 LPP-L---IKDLFYVGPNQLPIRLKEVSATILANIVNIGYDFDK 395
>TAIR|locus:2198180 [details] [associations]
symbol:AT1G01670 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC009273 GO:GO:0004842
Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151 HSSP:Q8VZ40
eggNOG:KOG0167 PIR:E86147 EMBL:AK118101 IPI:IPI00528098
RefSeq:NP_171673.2 UniGene:At.42637 ProteinModelPortal:Q8GXQ7
SMR:Q8GXQ7 EnsemblPlants:AT1G01670.1 GeneID:839365
KEGG:ath:AT1G01670 TAIR:At1g01670 InParanoid:Q8GXQ7 OMA:NDNEMEL
PhylomeDB:Q8GXQ7 Genevestigator:Q8GXQ7 Uniprot:Q8GXQ7
Length = 365
Score = 132 (51.5 bits), Expect = 8.4e-06, P = 8.4e-06
Identities = 30/76 (39%), Positives = 38/76 (50%)
Query: 7 PLDLSVQI--PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
PL SV I P F CPIS ++M +P G TY+ W+ G P+T L +
Sbjct: 285 PLQWSVSIEPPQCFICPISKDIMQNPHVAADGYTYEADEFRRWLNHGGEKSPMTNLRLEN 344
Query: 65 FTLIPNHTLRRLIQDW 80
LIPN LR I+DW
Sbjct: 345 RNLIPNLVLRSAIKDW 360
>TAIR|locus:2098816 [details] [associations]
symbol:AT3G61390 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AL132962 EMBL:AL137898 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 Gene3D:3.40.50.620 InterPro:IPR014729 GO:GO:0000151
HSSP:Q8VZ40 EMBL:AK117154 EMBL:BT005367 IPI:IPI00525308 PIR:T47931
RefSeq:NP_191698.2 UniGene:At.34291 ProteinModelPortal:Q8GZ84
SMR:Q8GZ84 EnsemblPlants:AT3G61390.2 GeneID:825311
KEGG:ath:AT3G61390 TAIR:At3g61390 eggNOG:NOG327619
HOGENOM:HOG000115794 InParanoid:Q8GZ84 OMA:QITESYT PhylomeDB:Q8GZ84
ProtClustDB:CLSN2680474 Genevestigator:Q8GZ84 Uniprot:Q8GZ84
Length = 435
Score = 131 (51.2 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 25/66 (37%), Positives = 36/66 (54%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P +F CPI+ ++M DP G TY+ +I W G+ T P+ L +L+PN LR
Sbjct: 354 PQYFICPITHDIMEDPHVAADGFTYEGEAISRWFERGHETSPMINKRLPHTSLVPNLALR 413
Query: 75 RLIQDW 80
IQ+W
Sbjct: 414 SAIQEW 419
>UNIPROTKB|H3BTA3 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0000151 "ubiquitin ligase complex"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] InterPro:IPR003613 Pfam:PF04564 SMART:SM00504
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:Z92544 HGNC:HGNC:11427 Ensembl:ENST00000564316 Uniprot:H3BTA3
Length = 157
Score = 113 (44.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 81 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 140
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 141 KEVIDAFISEN 151
>TAIR|locus:2151641 [details] [associations]
symbol:AT5G61560 species:3702 "Arabidopsis thaliana"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=IEA] [GO:0004713
"protein tyrosine kinase activity" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016301
"kinase activity" evidence=ISS] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0016772 "transferase activity,
transferring phosphorus-containing groups" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0002237 "response to molecule of
bacterial origin" evidence=RCA] [GO:0002238 "response to molecule
of fungal origin" evidence=RCA] [GO:0002679 "respiratory burst
involved in defense response" evidence=RCA] [GO:0006499 "N-terminal
protein myristoylation" evidence=RCA] [GO:0006865 "amino acid
transport" evidence=RCA] [GO:0009581 "detection of external
stimulus" evidence=RCA] [GO:0009595 "detection of biotic stimulus"
evidence=RCA] [GO:0010200 "response to chitin" evidence=RCA]
[GO:0030968 "endoplasmic reticulum unfolded protein response"
evidence=RCA] InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR003613 InterPro:IPR006016 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00582 Pfam:PF04564
Pfam:PF07714 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005886 GO:GO:0005524
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0009507 GO:GO:0006950
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 Gene3D:3.40.50.620
InterPro:IPR014729 GO:GO:0000151 EMBL:AB012239 HSSP:Q8VZ40
HOGENOM:HOG000237993 EMBL:AK228747 IPI:IPI00543972 IPI:IPI00886514
RefSeq:NP_200964.2 UniGene:At.29098 ProteinModelPortal:Q9FKG5
SMR:Q9FKG5 STRING:Q9FKG5 PaxDb:Q9FKG5 PRIDE:Q9FKG5
EnsemblPlants:AT5G61560.1 GeneID:836277 KEGG:ath:AT5G61560
GeneFarm:2020 TAIR:At5g61560 InParanoid:Q9FKG5 OMA:CIERETE
PhylomeDB:Q9FKG5 ProtClustDB:CLSN2918426 Genevestigator:Q9FKG5
Uniprot:Q9FKG5
Length = 796
Score = 132 (51.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P HF CPI+ ++M +P G TY++ +I+ W+ N P+T P +L+PNH+L
Sbjct: 726 PTHFYCPITKDVMENPCVASDGYTYEKRAIKEWLQK-NHKSPMTDLPFPSDSLLPNHSLL 784
Query: 75 RLIQDW 80
I++W
Sbjct: 785 SAIKEW 790
>UNIPROTKB|Q0DR28 [details] [associations]
symbol:PUB57 "U-box domain-containing protein 57"
species:39947 "Oryza sativa Japonica Group" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] InterPro:IPR000719
InterPro:IPR003613 InterPro:IPR008266 InterPro:IPR011009
Pfam:PF00069 Pfam:PF04564 PROSITE:PS00109 PROSITE:PS50011
SMART:SM00504 UniPathway:UPA00143 GO:GO:0005524 eggNOG:COG0515
SUPFAM:SSF56112 EMBL:DP000009 EMBL:AP008209 GO:GO:0004713
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151
EMBL:AC114983 EMBL:AK069682 RefSeq:NP_001050396.1 UniGene:Os.52876
EnsemblPlants:LOC_Os03g31070.1 GeneID:4333147
KEGG:dosa:Os03t0424200-01 KEGG:osa:4333147 Gramene:Q0DR28
OMA:IDINATF Uniprot:Q0DR28
Length = 518
Score = 128 (50.1 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 25/67 (37%), Positives = 35/67 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
+P F CPIS+E+M DP G TY+ +I W G + P+T L + L+PN L
Sbjct: 435 VPAAFICPISMEIMKDPQVASDGFTYEAEAIRCWFDRGISRSPMTNLALPNLNLVPNRVL 494
Query: 74 RRLIQDW 80
R I +
Sbjct: 495 RSFIHGY 501
>WB|WBGene00000500 [details] [associations]
symbol:chn-1 species:6239 "Caenorhabditis elegans"
[GO:0016567 "protein ubiquitination" evidence=IEA;IDA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IDA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040011 "locomotion"
evidence=IGI;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0018991 "oviposition" evidence=IGI] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0000209 "protein
polyubiquitination" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0030544 "Hsp70 protein binding" evidence=IPI] [GO:0051087
"chaperone binding" evidence=IPI] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 GO:GO:0005737
GO:GO:0018991 GO:GO:0002119 GO:GO:0040011 Gene3D:1.25.40.10
GO:GO:0045214 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
GO:GO:0000209 GO:GO:0000151 GO:GO:0051865 KO:K09561
GeneTree:ENSGT00650000093277 EMBL:FO081495 EMBL:AF303269 PIR:T25874
RefSeq:NP_491781.2 UniGene:Cel.19411 ProteinModelPortal:G5ECY6
SMR:G5ECY6 EnsemblMetazoa:T09B4.10.1 EnsemblMetazoa:T09B4.10.2
GeneID:172303 KEGG:cel:CELE_T09B4.10 CTD:172303 WormBase:T09B4.10
OMA:HSWAYKL NextBio:874925 Uniprot:G5ECY6
Length = 266
Score = 117 (46.2 bits), Expect = 0.00021, P = 0.00021
Identities = 27/66 (40%), Positives = 39/66 (59%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
++P I+LELM +PV V +G TYDR I + PVTR PLT+ +IPN+
Sbjct: 184 EVPEMLCGKITLELMKEPVIVPSGITYDREEIVQHLRRIGHFDPVTRKPLTENEIIPNYA 243
Query: 73 LRRLIQ 78
L+ +I+
Sbjct: 244 LKEVIE 249
>DICTYBASE|DDB_G0293212 [details] [associations]
symbol:DDB_G0293212 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003613 Pfam:PF04564
SMART:SM00382 SMART:SM00504 dictyBase:DDB_G0293212 GO:GO:0005524
EMBL:AAFI02000200 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0017111 GO:GO:0004842 GO:GO:0000151 eggNOG:COG0507
InterPro:IPR010285 Pfam:PF05970 RefSeq:XP_629245.1
ProteinModelPortal:Q54C21 EnsemblProtists:DDB0191825 GeneID:8629127
KEGG:ddi:DDB_G0293212 InParanoid:Q54C21 OMA:RNANQEN
ProtClustDB:CLSZ2429302 Uniprot:Q54C21
Length = 846
Score = 122 (48.0 bits), Expect = 0.00037, P = 0.00037
Identities = 27/68 (39%), Positives = 35/68 (51%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPL-TDFTLIPNHT 72
IP +F CPIS ++M P G T++R SI W VT+ P T LIPN
Sbjct: 772 IPIYFLCPISQKIMEHPYVAPDGYTFERSSILEWFDKRGAISFVTKRPFSTSAILIPNRN 831
Query: 73 LRRLIQDW 80
L+ IQ+W
Sbjct: 832 LKAQIQEW 839
>UNIPROTKB|J9NRV4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 OMA:QENELHS
GeneTree:ENSGT00650000093277 EMBL:AAEX03004675
Ensembl:ENSCAFT00000049790 Uniprot:J9NRV4
Length = 231
Score = 113 (44.8 bits), Expect = 0.00040, P = 0.00040
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 155 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 214
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 215 KEVIDAFISEN 225
>ZFIN|ZDB-GENE-030131-2963 [details] [associations]
symbol:stub1 "STIP1 homology and U-Box containing
protein 1" species:7955 "Danio rerio" [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0030544 "Hsp70 protein
binding" evidence=ISS] [GO:0030911 "TPR domain binding"
evidence=ISS] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=ISS] [GO:0046332 "SMAD binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0051879 "Hsp90 protein
binding" evidence=ISS] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=ISS] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISS] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028
SMART:SM00504 ZFIN:ZDB-GENE-030131-2963 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0004842
InterPro:IPR013105 Pfam:PF07719 GO:GO:0000151
GeneTree:ENSGT00650000093277 EMBL:CT573356 IPI:IPI00499851
Ensembl:ENSDART00000145075 Bgee:F1Q8K3 Uniprot:F1Q8K3
Length = 287
Score = 115 (45.5 bits), Expect = 0.00042, P = 0.00042
Identities = 29/72 (40%), Positives = 38/72 (52%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
+IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN
Sbjct: 210 EIPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLA 269
Query: 73 LRRLIQDWCVAN 84
++ +I + N
Sbjct: 270 MKEVIDAFIQEN 281
>UNIPROTKB|F1P105 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006515 "misfolded or incompletely synthesized protein
catabolic process" evidence=IEA] [GO:0019900 "kinase binding"
evidence=IEA] [GO:0030544 "Hsp70 protein binding" evidence=IEA]
[GO:0030579 "ubiquitin-dependent SMAD protein catabolic process"
evidence=IEA] [GO:0030911 "TPR domain binding" evidence=IEA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=IEA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=IEA] [GO:0042405 "nuclear inclusion body" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0046332 "SMAD binding" evidence=IEA]
[GO:0051787 "misfolded protein binding" evidence=IEA] [GO:0051865
"protein autoubiquitination" evidence=IEA] [GO:0051879 "Hsp90
protein binding" evidence=IEA] [GO:0070534 "protein K63-linked
ubiquitination" evidence=IEA] [GO:0071218 "cellular response to
misfolded protein" evidence=IEA] [GO:0090035 "positive regulation
of chaperone-mediated protein complex assembly" evidence=IEA]
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00504 GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515
GO:GO:0032436 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 IPI:IPI00600865
OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:AADN02049413 EMBL:AADN02049414
Ensembl:ENSGALT00000001529 Uniprot:F1P105
Length = 251
Score = 113 (44.8 bits), Expect = 0.00051, P = 0.00051
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 175 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAM 234
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 235 KEVIDAFISEN 245
>ASPGD|ASPL0000001660 [details] [associations]
symbol:AN5906 species:162425 "Emericella nidulans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00504
EMBL:BN001301 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 HOGENOM:HOG000163725
OMA:QENELHS EnsemblFungi:CADANIAT00007127 Uniprot:C8UZU5
Length = 293
Score = 114 (45.2 bits), Expect = 0.00056, P = 0.00056
Identities = 25/71 (35%), Positives = 40/71 (56%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
+P + PI+ E+M DPV V +G ++DR I +V P+TR+P+T L PN+ L
Sbjct: 218 VPDYLVDPITFEIMHDPVIVPSGTSFDRIGILKYVEQSGVD-PITRTPMTVNDLRPNYAL 276
Query: 74 RRLIQDWCVAN 84
+ +D+ N
Sbjct: 277 KAACEDFLTKN 287
>TAIR|locus:2030462 [details] [associations]
symbol:SAUL1 "senescence-associated E3 ubiquitin ligase
1" species:3702 "Arabidopsis thaliana" [GO:0000151 "ubiquitin
ligase complex" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=ISM;IDA]
[GO:0016567 "protein ubiquitination" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0070696 "transmembrane receptor
protein serine/threonine kinase binding" evidence=IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0010115 "regulation of abscisic
acid biosynthetic process" evidence=IMP] [GO:0010150 "leaf
senescence" evidence=IMP] [GO:0010271 "regulation of chlorophyll
catabolic process" evidence=IMP] [GO:0010380 "regulation of
chlorophyll biosynthetic process" evidence=IMP] [GO:0090359
"negative regulation of abscisic acid biosynthetic process"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000225 InterPro:IPR003613 InterPro:IPR016024
Pfam:PF00514 PROSITE:PS50176 SMART:SM00185 SMART:SM00504
UniPathway:UPA00143 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 SUPFAM:SSF48371
Gene3D:1.25.10.10 InterPro:IPR011989 EMBL:AC069251 GO:GO:0010150
GO:GO:0010380 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010271
GO:GO:0004842 GO:GO:0000151 HSSP:Q8VZ40 eggNOG:NOG276937
HOGENOM:HOG000241783 ProtClustDB:CLSN2682757 EMBL:AY059775
EMBL:AY096753 IPI:IPI00539405 IPI:IPI00886504 RefSeq:NP_564125.2
UniGene:At.21947 ProteinModelPortal:Q9LM76 SMR:Q9LM76 IntAct:Q9LM76
STRING:Q9LM76 PaxDb:Q9LM76 PRIDE:Q9LM76 EnsemblPlants:AT1G20780.1
GeneID:838668 KEGG:ath:AT1G20780 TAIR:At1g20780 InParanoid:Q9LM76
OMA:VARDYNL PhylomeDB:Q9LM76 Genevestigator:Q9LM76 GO:GO:0090359
Uniprot:Q9LM76
Length = 801
Score = 119 (46.9 bits), Expect = 0.00075, P = 0.00075
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 18 FRCPISLELMCDPVTVCTGQTYDRPSIESWVA----TGNT-TCPVTRSPLTDFTLIPNHT 72
F CP++ E+M DPVT+ G+T++R +IE W +G +CP+T LT + +
Sbjct: 27 FICPLTKEVMHDPVTLENGRTFEREAIEKWFKECRDSGRPPSCPLTSQELTSTDVSASIA 86
Query: 73 LRRLIQDW 80
LR I++W
Sbjct: 87 LRNTIEEW 94
>UNIPROTKB|F1MUH4 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0000151 "ubiquitin ligase complex" evidence=IEA]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0004842 GO:GO:0000151 GeneTree:ENSGT00650000093277
EMBL:DAAA02057282 IPI:IPI00714977 Ensembl:ENSBTAT00000057514
ArrayExpress:F1MUH4 Uniprot:F1MUH4
Length = 302
Score = 113 (44.8 bits), Expect = 0.00077, P = 0.00077
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 227 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 286
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 287 KEVIDAFISEN 297
>UNIPROTKB|Q9UNE7 [details] [associations]
symbol:STUB1 "E3 ubiquitin-protein ligase CHIP"
species:9606 "Homo sapiens" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA;IMP;TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000209 "protein polyubiquitination"
evidence=IDA;IMP] [GO:0051865 "protein autoubiquitination"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase activity"
evidence=ISS] [GO:0070534 "protein K63-linked ubiquitination"
evidence=IDA] [GO:0000151 "ubiquitin ligase complex" evidence=IDA]
[GO:0019899 "enzyme binding" evidence=IPI] [GO:0051879 "Hsp90
protein binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0030544 "Hsp70 protein binding" evidence=IDA]
[GO:0031398 "positive regulation of protein ubiquitination"
evidence=IDA] [GO:0031943 "regulation of glucocorticoid metabolic
process" evidence=IDA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0030911 "TPR domain binding" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0051604
"protein maturation" evidence=TAS] [GO:0031371 "ubiquitin
conjugating enzyme complex" evidence=TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0046332 "SMAD binding" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007179 "transforming
growth factor beta receptor signaling pathway" evidence=TAS]
[GO:0030512 "negative regulation of transforming growth factor beta
receptor signaling pathway" evidence=TAS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0051787 "misfolded protein
binding" evidence=IDA] [GO:0071218 "cellular response to misfolded
protein" evidence=IDA] [GO:0006515 "misfolded or incompletely
synthesized protein catabolic process" evidence=IDA] [GO:0090035
"positive regulation of chaperone-mediated protein complex
assembly" evidence=IDA] [GO:0019900 "kinase binding" evidence=IPI]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_6900 GO:GO:0042803
Pathway_Interaction_DB:alphasynuclein_pathway GO:GO:0043161
GO:GO:0006281 GO:GO:0030674 EMBL:CH471112 Gene3D:1.25.40.10
GO:GO:0046332 GO:GO:0007179 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0051879 GO:GO:0032436
GO:GO:0051604 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0030512 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
GO:GO:0034450 EMBL:AE006464 HOGENOM:HOG000163725 KO:K09561
CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
EMBL:AF039689 EMBL:AF129085 EMBL:AF432221 EMBL:AF217968 EMBL:Z92544
EMBL:BC007545 EMBL:BC017178 EMBL:BC022788 EMBL:BC063617
IPI:IPI00025156 IPI:IPI00645380 RefSeq:NP_005852.2
UniGene:Hs.592081 ProteinModelPortal:Q9UNE7 SMR:Q9UNE7
DIP:DIP-29752N IntAct:Q9UNE7 MINT:MINT-1132706 STRING:Q9UNE7
PhosphoSite:Q9UNE7 DMDM:78099173 PaxDb:Q9UNE7 PRIDE:Q9UNE7
DNASU:10273 Ensembl:ENST00000219548 Ensembl:ENST00000564370
Ensembl:ENST00000565677 GeneID:10273 KEGG:hsa:10273 UCSC:uc002cit.3
GeneCards:GC16P000736 H-InvDB:HIX0012661 HGNC:HGNC:11427 MIM:607207
neXtProt:NX_Q9UNE7 PharmGKB:PA36227 InParanoid:Q9UNE7 OMA:QENELHS
PhylomeDB:Q9UNE7 GenomeRNAi:10273 NextBio:38918 Bgee:Q9UNE7
CleanEx:HS_STUB1 Genevestigator:Q9UNE7 GermOnline:ENSG00000103266
GO:GO:0031371 GO:GO:0051787 GO:GO:0030911 GO:GO:0090035
GO:GO:0031943 GO:GO:0030579 Uniprot:Q9UNE7
Length = 303
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 227 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 286
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 287 KEVIDAFISEN 297
>UNIPROTKB|F1RG35 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 KO:K09561 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 EMBL:FP016225
RefSeq:XP_003124756.2 Ensembl:ENSSSCT00000008776 GeneID:100511251
KEGG:ssc:100511251 Uniprot:F1RG35
Length = 303
Score = 113 (44.8 bits), Expect = 0.00078, P = 0.00078
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 227 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 286
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 287 KEVIDAFISEN 297
>MGI|MGI:1891731 [details] [associations]
symbol:Stub1 "STIP1 homology and U-Box containing protein 1"
species:10090 "Mus musculus" [GO:0000151 "ubiquitin ligase complex"
evidence=ISO] [GO:0000209 "protein polyubiquitination"
evidence=ISO;IDA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006457 "protein folding" evidence=TAS]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISO] [GO:0006515 "misfolded or incompletely synthesized
protein catabolic process" evidence=ISO;IMP] [GO:0006974 "response
to DNA damage stimulus" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=TAS] [GO:0016874 "ligase activity"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=ISO] [GO:0030544 "Hsp70
protein binding" evidence=ISO;ISS;TAS] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=ISO]
[GO:0030674 "protein binding, bridging" evidence=TAS] [GO:0030911
"TPR domain binding" evidence=ISO;ISS] [GO:0031072 "heat shock
protein binding" evidence=TAS] [GO:0031371 "ubiquitin conjugating
enzyme complex" evidence=TAS] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO;ISS] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IPI] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=ISO;ISS] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO;ISS] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IDA] [GO:0042405
"nuclear inclusion body" evidence=ISO] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO;IMP]
[GO:0046332 "SMAD binding" evidence=ISO] [GO:0051604 "protein
maturation" evidence=TAS] [GO:0051787 "misfolded protein binding"
evidence=ISO] [GO:0051865 "protein autoubiquitination"
evidence=ISO] [GO:0051879 "Hsp90 protein binding" evidence=ISO;ISS]
[GO:0070534 "protein K63-linked ubiquitination" evidence=ISO]
[GO:0071218 "cellular response to misfolded protein"
evidence=ISO;IMP] [GO:0090035 "positive regulation of
chaperone-mediated protein complex assembly" evidence=ISO]
InterPro:IPR001440 InterPro:IPR003613 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564
PROSITE:PS50005 PROSITE:PS50293 SMART:SM00028 SMART:SM00504
UniPathway:UPA00143 MGI:MGI:1891731 GO:GO:0005737 GO:GO:0042803
GO:GO:0006457 GO:GO:0043161 GO:GO:0006281 GO:GO:0030674
Gene3D:1.25.40.10 GO:GO:0046332 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0051879
GO:GO:0032436 GO:GO:0051604 GO:GO:0000151 GO:GO:0070534
GO:GO:0051865 GO:GO:0042405 GO:GO:0071218 GO:GO:0030544
BRENDA:6.3.2.19 GO:GO:0034450 eggNOG:NOG260504 HOGENOM:HOG000163725
KO:K09561 CTD:10273 HOVERGEN:HBG053046 OrthoDB:EOG4Z36F9
OMA:QENELHS GO:GO:0031371 GO:GO:0030911 GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 EMBL:AF129086 EMBL:AK002752 EMBL:AK004464
EMBL:AK045776 EMBL:AK166630 EMBL:BC027427 EMBL:BC038939
IPI:IPI00471361 RefSeq:NP_062693.1 UniGene:Mm.277599 PDB:2C2L
PDB:2C2V PDB:3Q47 PDB:3Q49 PDB:3Q4A PDBsum:2C2L PDBsum:2C2V
PDBsum:3Q47 PDBsum:3Q49 PDBsum:3Q4A ProteinModelPortal:Q9WUD1
SMR:Q9WUD1 DIP:DIP-29751N IntAct:Q9WUD1 STRING:Q9WUD1
PhosphoSite:Q9WUD1 PaxDb:Q9WUD1 PRIDE:Q9WUD1
Ensembl:ENSMUST00000044911 GeneID:56424 KEGG:mmu:56424
UCSC:uc008bcf.1 GeneTree:ENSGT00650000093277 InParanoid:Q9WUD1
EvolutionaryTrace:Q9WUD1 NextBio:312582 Bgee:Q9WUD1
CleanEx:MM_STUB1 Genevestigator:Q9WUD1
GermOnline:ENSMUSG00000039615 Uniprot:Q9WUD1
Length = 304
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00078
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 228 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 287
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 288 KEVIDAFISEN 298
>RGD|1306167 [details] [associations]
symbol:Stub1 "STIP1 homology and U-box containing protein 1, E3
ubiquitin protein ligase" species:10116 "Rattus norvegicus"
[GO:0000151 "ubiquitin ligase complex" evidence=IEA;ISO]
[GO:0000209 "protein polyubiquitination" evidence=ISO] [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process"
evidence=IEA;ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019900 "kinase binding" evidence=IEA;ISO] [GO:0030544 "Hsp70
protein binding" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA;ISO] [GO:0030911 "TPR
domain binding" evidence=IEA;ISO] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO] [GO:0031625 "ubiquitin
protein ligase binding" evidence=IEA;ISO] [GO:0031943 "regulation
of glucocorticoid metabolic process" evidence=IEA;ISO] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA;ISO] [GO:0042405
"nuclear inclusion body" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA;ISO] [GO:0046332 "SMAD binding" evidence=IEA;ISO]
[GO:0051787 "misfolded protein binding" evidence=IEA;ISO]
[GO:0051865 "protein autoubiquitination" evidence=IEA;ISO]
[GO:0051879 "Hsp90 protein binding" evidence=IEA;ISO] [GO:0070534
"protein K63-linked ubiquitination" evidence=IEA;ISO] [GO:0071218
"cellular response to misfolded protein" evidence=IEA;ISO]
[GO:0090035 "positive regulation of chaperone-mediated protein
complex assembly" evidence=IEA;ISO] InterPro:IPR001440
InterPro:IPR003613 InterPro:IPR011990 InterPro:IPR013026
InterPro:IPR019734 Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00028 SMART:SM00504 RGD:1306167
GO:GO:0005737 GO:GO:0043161 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0031398 GO:GO:0006515 GO:GO:0032436
EMBL:CH473948 GO:GO:0000151 GO:GO:0070534 GO:GO:0051865
GO:GO:0042405 GO:GO:0071218 GO:GO:0034450 KO:K09561 CTD:10273
OrthoDB:EOG4Z36F9 OMA:QENELHS GO:GO:0090035 GO:GO:0031943
GO:GO:0030579 GeneTree:ENSGT00650000093277 IPI:IPI00203158
RefSeq:NP_001020796.2 UniGene:Rn.6504 Ensembl:ENSRNOT00000026921
GeneID:287155 KEGG:rno:287155 UCSC:RGD:1306167 NextBio:625631
Uniprot:D4A4T0
Length = 304
Score = 113 (44.8 bits), Expect = 0.00079, P = 0.00078
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 228 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 287
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 288 KEVIDAFISEN 298
>UNIPROTKB|Q5ZHY5 [details] [associations]
symbol:STUB1 "STIP1 homology and U box-containing protein
1" species:9031 "Gallus gallus" [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0071218 "cellular response to misfolded
protein" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0034450 "ubiquitin-ubiquitin ligase
activity" evidence=ISS] [GO:0000209 "protein polyubiquitination"
evidence=ISS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0042803
GO:GO:0043161 GO:GO:0006281 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006515 GO:GO:0000209 GO:GO:0000151
GO:GO:0071218 GO:GO:0034450 KO:K09561 EMBL:AJ720999 IPI:IPI00600865
RefSeq:NP_001026577.1 UniGene:Gga.6217 ProteinModelPortal:Q5ZHY5
SMR:Q5ZHY5 IntAct:Q5ZHY5 STRING:Q5ZHY5 GeneID:426918
KEGG:gga:426918 CTD:10273 eggNOG:COG5113 HOVERGEN:HBG053046
InParanoid:Q5ZHY5 OrthoDB:EOG4Z36F9 NextBio:20828310 Uniprot:Q5ZHY5
Length = 314
Score = 113 (44.8 bits), Expect = 0.00084, P = 0.00084
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 238 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAM 297
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 298 KEVIDAFISEN 308
>UNIPROTKB|E1B7G3 [details] [associations]
symbol:STUB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0090035 "positive regulation of chaperone-mediated
protein complex assembly" evidence=IEA] [GO:0071218 "cellular
response to misfolded protein" evidence=IEA] [GO:0070534 "protein
K63-linked ubiquitination" evidence=IEA] [GO:0051879 "Hsp90 protein
binding" evidence=IEA] [GO:0051865 "protein autoubiquitination"
evidence=IEA] [GO:0051787 "misfolded protein binding" evidence=IEA]
[GO:0046332 "SMAD binding" evidence=IEA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042405 "nuclear inclusion body" evidence=IEA] [GO:0034450
"ubiquitin-ubiquitin ligase activity" evidence=IEA] [GO:0032436
"positive regulation of proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0031943 "regulation of
glucocorticoid metabolic process" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0031398
"positive regulation of protein ubiquitination" evidence=IEA]
[GO:0030911 "TPR domain binding" evidence=IEA] [GO:0030579
"ubiquitin-dependent SMAD protein catabolic process" evidence=IEA]
[GO:0030544 "Hsp70 protein binding" evidence=IEA] [GO:0019900
"kinase binding" evidence=IEA] [GO:0006515 "misfolded or
incompletely synthesized protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000151 "ubiquitin ligase
complex" evidence=IEA] InterPro:IPR001440 InterPro:IPR003613
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF00515 Pfam:PF04564 PROSITE:PS50005 PROSITE:PS50293
SMART:SM00028 SMART:SM00504 GO:GO:0005737 GO:GO:0043161
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
GO:GO:0031398 GO:GO:0006515 GO:GO:0032436 GO:GO:0000151
GO:GO:0070534 GO:GO:0051865 GO:GO:0042405 GO:GO:0071218
GO:GO:0034450 OMA:QENELHS GO:GO:0090035 GO:GO:0031943 GO:GO:0030579
GeneTree:ENSGT00650000093277 EMBL:DAAA02057282 IPI:IPI00714977
Ensembl:ENSBTAT00000025473 ArrayExpress:E1B7G3 Uniprot:E1B7G3
Length = 319
Score = 113 (44.8 bits), Expect = 0.00086, P = 0.00086
Identities = 29/71 (40%), Positives = 37/71 (52%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP + IS ELM +P +G TYDR IE + PVTRSPLT LIPN +
Sbjct: 227 IPDYLCGKISFELMREPCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQEQLIPNLAM 286
Query: 74 RRLIQDWCVAN 84
+ +I + N
Sbjct: 287 KEVIDAFISEN 297
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.133 0.387 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 418 377 0.00089 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 78
No. of states in DFA: 609 (65 KB)
Total size of DFA: 232 KB (2126 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 27.39u 0.16s 27.55t Elapsed: 00:00:01
Total cpu time: 27.40u 0.16s 27.56t Elapsed: 00:00:01
Start: Mon May 20 19:55:22 2013 End: Mon May 20 19:55:23 2013