BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 014817
(418 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FXA4|PUB26_ARATH U-box domain-containing protein 26 OS=Arabidopsis thaliana GN=PUB26
PE=2 SV=1
Length = 421
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 290/422 (68%), Positives = 348/422 (82%), Gaps = 5/422 (1%)
Query: 1 MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRS 60
MPG+LEPLDL +QIPYHFRCPISL+LM DPVT+ TGQTYDR SI+SW+A GNTTCPVTR
Sbjct: 1 MPGNLEPLDLGIQIPYHFRCPISLDLMSDPVTISTGQTYDRTSIDSWIAMGNTTCPVTRV 60
Query: 61 PLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTY-- 118
L+DFTLIPNHTLRRLIQ+WCVANRS GV+RIPTPKQPA+P VR+LL+QAS+ + T+
Sbjct: 61 ALSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPISVRSLLSQASAITGTHVS 120
Query: 119 -GSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALL 177
SR +A+RRLRGLARDS+KNR LI+ HN R IL ++ F +I T+ S EL ESLALL
Sbjct: 121 VRSRAAAIRRLRGLARDSEKNRVLIAGHNAREILVRILFADIET-TSLSSELVSESLALL 179
Query: 178 VMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISN 237
V+ +TETEC +ASD ++ ++ LLF SSIE+RVN+AALIE+VL G +S +L+ IS
Sbjct: 180 VLLHMTETECEAVASDPSRVGFMTRLLFDSSIEIRVNAAALIEMVLTGAKSMDLKLIISG 239
Query: 238 LDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLA-DFD 296
D IFEGV+D+LKN S R LK+GIKA+FALCLVKQTR+ A++AGA L+DRLA DFD
Sbjct: 240 SDSIFEGVLDLLKNPISSRRALKIGIKAIFALCLVKQTRHLAISAGAPGILIDRLAADFD 299
Query: 297 KCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSAS 356
+CD ER LATVELLCR+P GCA F EHALTVPL+VKTIL++SDRATEYAAGAL ALC+A
Sbjct: 300 RCDTERGLATVELLCRLPEGCAAFGEHALTVPLMVKTILRVSDRATEYAAGALLALCTAE 359
Query: 357 ERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVV 416
ERC+ +A +AG++TQLLLLVQSDCT+RAKRKAQ+LLKLLRDSWP DS +SDDF SEV
Sbjct: 360 ERCRDEAAAAGLVTQLLLLVQSDCTERAKRKAQMLLKLLRDSWPDDSTVHSDDFNRSEVA 419
Query: 417 PF 418
PF
Sbjct: 420 PF 421
>sp|Q9LT79|PUB25_ARATH U-box domain-containing protein 25 OS=Arabidopsis thaliana GN=PUB25
PE=2 SV=1
Length = 421
Score = 545 bits (1403), Expect = e-154, Method: Compositional matrix adjust.
Identities = 287/426 (67%), Positives = 341/426 (80%), Gaps = 13/426 (3%)
Query: 1 MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGN-TTCPVTR 59
MP ++EPLDL +QIPYHFRCPISLELM DPVTVCTGQTYDR SIESWV+ GN TTCPVTR
Sbjct: 1 MPRNIEPLDLGIQIPYHFRCPISLELMQDPVTVCTGQTYDRASIESWVSIGNNTTCPVTR 60
Query: 60 SPLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTY- 118
+PL+DFTLIPNHTLRRLIQ+WCVANRS GV+RIPTPKQPA+P+ VR LL+QAS+ + T+
Sbjct: 61 APLSDFTLIPNHTLRRLIQEWCVANRSNGVERIPTPKQPADPTSVRALLSQASAITGTHV 120
Query: 119 --GSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLAL 176
SR +ALRRLRG ARDSDKNR LI++HN IL ++ F+ +S EL ESLAL
Sbjct: 121 SVRSRAAALRRLRGFARDSDKNRVLIAAHNATEILIKILFSE-----TTSSELVSESLAL 175
Query: 177 LVMFPLTE-TECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQI 235
LVM P+TE + + I+SD ++ L+ LLF SSIE RVN+AALIEIV G +S +L+ I
Sbjct: 176 LVMLPITEPNQFVSISSDPGRVEFLTRLLFDSSIETRVNAAALIEIVSTGTKSADLKGSI 235
Query: 236 SNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLA-D 294
SN + +FEGV+D+L+N S R LK+GIK LFALC VK TR+ A+ AGA E L+DRLA D
Sbjct: 236 SNSESVFEGVLDLLRNPISSRRALKIGIKTLFALCSVKSTRHIAITAGAPEILIDRLAAD 295
Query: 295 FDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCS 354
FD+CD ERALATVELLCR P GCA F EHALTVPLLVKTIL++SDRATEYAAGAL ALC+
Sbjct: 296 FDRCDTERALATVELLCRTPEGCAAFGEHALTVPLLVKTILRVSDRATEYAAGALLALCT 355
Query: 355 ASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQ-DSIGNSDDFAC- 412
A ER + +A AGV+ QLLL+VQS+CT+RAK+KAQ LLKLLRDSWP +S NSDDF C
Sbjct: 356 AEERWREEAAGAGVVVQLLLMVQSECTERAKKKAQKLLKLLRDSWPDYNSFANSDDFGCS 415
Query: 413 SEVVPF 418
S+VVPF
Sbjct: 416 SQVVPF 421
>sp|Q84TG3|PUB23_ARATH E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis thaliana GN=PUB23
PE=1 SV=1
Length = 411
Score = 199 bits (507), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 135/412 (32%), Positives = 215/412 (52%), Gaps = 30/412 (7%)
Query: 1 MPGSLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGN-TTCPVTR 59
M G + +D ++IP F CPISLE+M DPV V TG TYDR SIE W+ G +CPVT+
Sbjct: 1 MSGGI--MDEEIEIPPFFLCPISLEIMKDPVIVSTGITYDRDSIEKWLFAGKKNSCPVTK 58
Query: 60 SPLTDFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYG 119
+TD L PNHTLRRLIQ WC N S+GV+RIPTP+ P S + L+ ++S ++
Sbjct: 59 QDITDADLTPNHTLRRLIQSWCTLNASYGVERIPTPRPPICKSEIEKLIRDSAS---SHE 115
Query: 120 SRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVM 179
+++ L+RLR + ++ N+ + + V F NI + + L E+L LL
Sbjct: 116 NQVKCLKRLRQIVSENATNKRCLEAAGVPE-----FLANIVSNDSENGSLTDEALNLLYH 170
Query: 180 FPLTETECMEIASDADK---ITSLSSLLFHSSIEVRVNSAALIEIVLA---GMRSQELRA 233
+ET + ++ + SL+ ++ E RV + L++ +L M+S L+
Sbjct: 171 LETSETVLKNLLNNKKDNNIVKSLTKIMQRGMYESRVYATLLLKNILEVADPMQSMTLKP 230
Query: 234 QISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLA 293
E+F V+ IL + S + K + L +C + R+KAV AG +++ L
Sbjct: 231 ------EVFTEVVQILDDRISQ-KATKAAMHILVNICPWGRNRHKAVEAGVISVIIELLM 283
Query: 294 D----FDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGAL 349
D ++ E A+ ++LLC+ G AEF H + ++ K IL++S A++ A L
Sbjct: 284 DESFTSERRGPEMAMVVLDLLCQCAEGRAEFLNHGAAIAVVCKKILRVSQTASDRAVRVL 343
Query: 350 AALCS--ASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSW 399
++ A+ + + GV+ +L L++Q C + K KA+ LLKL W
Sbjct: 344 LSVGRFCATPALLHEMLQLGVVAKLCLVLQVSCGGKTKEKAKELLKLHARVW 395
>sp|Q9SVC6|PUB22_ARATH E3 ubiquitin-protein ligase PUB22 OS=Arabidopsis thaliana GN=PUB22
PE=1 SV=1
Length = 435
Score = 183 bits (465), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 128/428 (29%), Positives = 220/428 (51%), Gaps = 45/428 (10%)
Query: 8 LDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGN-TTCPVTRSPLTDFT 66
+D ++IP F CPISL++M DPV V TG TYDR SIE W+ +G +CPVT+ +T+
Sbjct: 1 MDQEIEIPSFFLCPISLDIMKDPVIVSTGITYDRESIEKWLFSGKKNSCPVTKQVITETD 60
Query: 67 LIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALR 126
L PNHTLRRLIQ WC N S+G++RIPTPK P S + L+ ++SS ++ +++ L+
Sbjct: 61 LTPNHTLRRLIQSWCTLNASYGIERIPTPKPPICKSEIEKLIKESSS---SHLNQVKCLK 117
Query: 127 RLRGLARDSDKNRSLISSHNVRAILSQVFFTNINV------------------------K 162
RLR + ++ N+ + + V L+ + +++ +
Sbjct: 118 RLRQIVSENTTNKRCLEAAEVPEFLANIVSNSVDTYNSPSSSLSSSNLNDMCQSNMLENR 177
Query: 163 TASSPELAHESLALLVMFPLTETECMEIASD---ADKITSLSSLLFHSSIEVRVNSAALI 219
SS L E+L++L +ET + ++ + + +L+ ++ E R A
Sbjct: 178 FDSSRSLMDEALSVLYHLDTSETALKSLLNNKKGTNLVKTLTKIMQRGIYESR----AYA 233
Query: 220 EIVLAGMRSQELRAQISNLD-EIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYK 278
++L + QI L+ E+F VI IL + S+ + + ++ L C + R+K
Sbjct: 234 ALLLKKLLEVADPMQIILLERELFGEVIQILHDQISH-KATRSAMQILVITCPWGRNRHK 292
Query: 279 AVAAGAAETLVDRLAD----FDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTI 334
AV G +++ L D ++ ++E A+ +++LC+ G AEF H + ++ K I
Sbjct: 293 AVEGGTISMIIELLMDDTFSSERRNSEMAMVVLDMLCQCAEGRAEFLNHGAAIAVVSKKI 352
Query: 335 LKISDRATEYAAGALAAL---CSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLL 391
L++S +E A L ++ C+ Q + + GV+ +L L++Q C ++ K KA+ L
Sbjct: 353 LRVSQITSERAVRVLLSVGRFCATPSLLQ-EMLQLGVVAKLCLVLQVSCGNKTKEKAKEL 411
Query: 392 LKLLRDSW 399
LKL W
Sbjct: 412 LKLHARVW 419
>sp|Q5PNY6|PUB21_ARATH U-box domain-containing protein 21 OS=Arabidopsis thaliana GN=PUB21
PE=2 SV=1
Length = 435
Score = 181 bits (460), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 126/391 (32%), Positives = 207/391 (52%), Gaps = 15/391 (3%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ IP F+CPIS++LM DPV + TG TYDR SIE+W+ +GN TCPVT + LT F IPNH
Sbjct: 29 ITIPPEFQCPISIDLMKDPVIISTGITYDRVSIETWINSGNKTCPVTNTVLTTFDQIPNH 88
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSES--NTYGSRLSALRRLR 129
T+R++IQ WCV S +QRIPTP+ P P V + + SS + Y + +++
Sbjct: 89 TIRKMIQGWCVEKGSPLIQRIPTPRVPLMPCEVYEISRKLSSATRRGDYEKCGVIIEKIK 148
Query: 130 GLARDSDKNRSLISSHNVRAILSQVF--FTNINVKTASSPELAHESLALLV-MFPLTETE 186
L +S+KNR ++ ++V +L F F+ T + +E L+LL MFP+
Sbjct: 149 KLGDESEKNRKCVNENSVGWVLCDCFDKFSGDEKLTF----MLNEILSLLTWMFPIGLEG 204
Query: 187 CMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVI 246
++AS A ++ LL + VR N+A +++ +L+ ++ + N + E ++
Sbjct: 205 ISKLAS-ATSFRCVAGLLKSTDDSVRQNAAFIMKEILSLDETRVHSFAVEN--GVAEALV 261
Query: 247 DILKNLSSYPRGLKVGIKALFALCLVK-QTRYKAVAAGAAETLVDRLADFDKCDAERALA 305
++++ S I A++ + L K + + + G V+ + D + E+ALA
Sbjct: 262 KLIRDSVSSSSTKSSLI-AIYQMVLQKPEIASEFLEIGLVSITVEMIVDAENSVCEKALA 320
Query: 306 TVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQ-RDAV 364
++ +C G E ++AL +PLLVK I K+S+ AT + + L DAV
Sbjct: 321 VLDAICETEHGREEVRKNALVMPLLVKKIAKVSELATRSSMSMILKLWKTGNTVAVEDAV 380
Query: 365 SAGVLTQLLLLVQSDCTDRAKRKAQLLLKLL 395
G ++LL++Q + K KA LLK++
Sbjct: 381 RLGAFQKVLLVLQVGYGEETKEKATELLKMM 411
>sp|Q9C8D1|PUB20_ARATH U-box domain-containing protein 20 OS=Arabidopsis thaliana GN=PUB20
PE=2 SV=1
Length = 431
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 199/398 (50%), Gaps = 32/398 (8%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
++ + IP F+CPIS ELM DPV + +G TYDR +IE W +G TCPVT + LT I
Sbjct: 28 EVEITIPSQFQCPISYELMKDPVIIASGITYDRENIEKWFESGYQTCPVTNTVLTSLEQI 87
Query: 69 PNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQ--ASSESNTYGSRLSALR 126
PNHT+RR+IQ WC ++ G++RIPTP+ P V + + A++ Y + + +
Sbjct: 88 PNHTIRRMIQGWCGSSLGGGIERIPTPRVPVTSHQVSEICERLSAATRRGDYAACMEMVT 147
Query: 127 RLRGLARDSDKNRSLISSHNVRAILSQVF--FTNINVKTASSPELAHESLALLV-MFPLT 183
++ L ++S++NR + + +L F F+ + A++ L E++++L M P+
Sbjct: 148 KMTRLGKESERNRKCVKENGAGLVLCVCFDAFS----ENANASLLLEETVSVLTWMLPIG 203
Query: 184 ETECMEIASDADKITSLSSLLFHSSIEV----RVNSAALI-EIVLAGMRSQELRAQISNL 238
K+T+ SS F+ +E+ N+A LI E++ + +I+ +
Sbjct: 204 -------LEGQSKLTTTSS--FNRLVELLRNGDQNAAFLIKELLELNVTHVHALTKINGV 254
Query: 239 DEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKC 298
E F +K+++ + I + ++T + + V+ L D +
Sbjct: 255 QEAF------MKSINRDSTCVNSLISIHHMILTNQETVSRFLELDLVNITVEMLVDSENS 308
Query: 299 DAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASER 358
E+AL + ++C G + + L +P+LVK ILKIS++ + +C + +
Sbjct: 309 VCEKALTVLNVICETKEGREKVRRNKLVIPILVKKILKISEKKD--LVSVMWKVCKSGDG 366
Query: 359 CQ-RDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLL 395
+ +A+ G +L++++Q C + K K LLK++
Sbjct: 367 SEVEEALRLGAFKKLVVMLQVGCGEGTKEKVTELLKMM 404
>sp|Q5VRH9|PUB12_ORYSJ U-box domain-containing protein 12 OS=Oryza sativa subsp. japonica
GN=PUB12 PE=2 SV=1
Length = 611
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/405 (32%), Positives = 192/405 (47%), Gaps = 33/405 (8%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP FRCPISLELM DPV V +GQTY+R I+ W+ +G+ TCP T+ PL+ +L PN L
Sbjct: 228 IPDEFRCPISLELMQDPVIVSSGQTYERSCIQKWLDSGHKTCPKTQQPLSHTSLTPNFVL 287
Query: 74 RRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALRRLRGLAR 133
+ LI WC AN G++ +P KQ + A S + +S + RLR +
Sbjct: 288 KSLISQWCEAN---GIE-LPKNKQNSRDK------KAAKSSDYDHAGLVSLMNRLRSGNQ 337
Query: 134 DSDKNRS----LISSHNV--RAILSQVFFTN--INVKTASSPELAHESLALLVMFPLTET 185
D + + L++ NV R +++ +N+ ++S P ++ L+ + E
Sbjct: 338 DEQRAAAGEIRLLAKRNVNNRICIAEAGAIPLLVNLLSSSDPRTQEHAVTALLNLSIHEN 397
Query: 186 ECMEIASDADKITSLSSLLFHSSIEVRVNSAA-LIEIVLAGMRSQELRAQISNLDEIFEG 244
I D+ I + +L S+E R N+AA L + + + A G
Sbjct: 398 NKASIV-DSHAIPKIVEVLKTGSMETRENAAATLFSLSVVDENKVTIGAA---------G 447
Query: 245 VIDILKNL--SSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAER 302
I L NL PRG K A+F LC+ + + +AV AG L++ L D +
Sbjct: 448 AIPPLINLLCDGSPRGKKDAATAIFNLCIYQGNKVRAVKAGIVIHLMNFLVDPTGGMIDE 507
Query: 303 ALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRD 362
AL+ + +L P G A + +P LV+ I S R E AA L LCSA
Sbjct: 508 ALSLLSILAGNPEGKIVIAR-SEPIPPLVEVIKTGSPRNRENAAAILWLLCSADTEQTLA 566
Query: 363 AVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNS 407
A +AGV L L ++ TDRAKRKA +L+L+ + GN
Sbjct: 567 AKAAGVEDALKELSETG-TDRAKRKASSILELMHQANEDSLKGNG 610
>sp|Q8GUG9|PUB11_ARATH U-box domain-containing protein 11 OS=Arabidopsis thaliana GN=PUB11
PE=2 SV=2
Length = 612
Score = 150 bits (380), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 130/396 (32%), Positives = 192/396 (48%), Gaps = 41/396 (10%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP F CP+SLELM DPV V TGQTY+R I+ W+ GN TCP T+ L +FTL PN+ L
Sbjct: 241 IPVDFLCPVSLELMKDPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVL 300
Query: 74 RRLIQDWCVANRSFGVQRIPTP--------KQPAEPSLVRTLLNQASSESNTYGSRLSAL 125
R LI WC I P K + S++R L+ + SS S R +A+
Sbjct: 301 RSLISRWCAE------HNIEQPAGYINGRTKNSGDMSVIRALVQRLSSRSTE--DRRNAV 352
Query: 126 RRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTET 185
+R L++ S NR LI+ +L V +S ++A + A+ + L+
Sbjct: 353 SEIRSLSKRSTDNRILIAEAGAIPVL---------VNLLTSEDVATQENAITCVLNLSIY 403
Query: 186 E-CMEIASDADKITSLSSLLFHSSIEVRVNSAA-LIEIVLAGMRSQELRAQISNLDEIFE 243
E E+ A +TS+ +L ++E R N+AA L + LA E + I I
Sbjct: 404 ENNKELIMFAGAVTSIVQVLRAGTMEARENAAATLFSLSLA----DENKIIIGGSGAI-P 458
Query: 244 GVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCD-AER 302
++D+L+N PRG K ALF LC+ + +AV AG LV L+D + +
Sbjct: 459 ALVDLLEN--GTPRGKKDAATALFNLCIYHGNKGRAVRAGIVTALVKMLSDSTRHRMVDE 516
Query: 303 ALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRD 362
AL + +L + + A T+P L+ + R E AA L +LC +R
Sbjct: 517 ALTILSVLANNQDAKSAIVK-ANTLPALIGILQTDQTRNRENAAAILLSLC---KRDTEK 572
Query: 363 AVSAGVLTQL--LLLVQSDCTDRAKRKAQLLLKLLR 396
++ G L + L+ + + T+R KRKA LL+LLR
Sbjct: 573 LITIGRLGAVVPLMDLSKNGTERGKRKAISLLELLR 608
>sp|Q9SNC6|PUB13_ARATH U-box domain-containing protein 13 OS=Arabidopsis thaliana GN=PUB13
PE=1 SV=1
Length = 660
Score = 148 bits (373), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 134/397 (33%), Positives = 192/397 (48%), Gaps = 37/397 (9%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP FRCPISLE+M DPV V +GQTY+R IE W+ G++TCP T+ LT TL PN+ L
Sbjct: 256 IPDDFRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVL 315
Query: 74 RRLIQDWCVAN--------RSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGS---RL 122
R LI WC AN S +++ + PAE + + L+ + + YG+ +
Sbjct: 316 RSLIAQWCEANDIEPPKPPSSLRPRKVSSFSSPAEANKIEDLMWRLA-----YGNPEDQR 370
Query: 123 SALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPE--LAHESLALLVMF 180
SA +R LA+ + NR I+ +L V S+P+ + S+ L+
Sbjct: 371 SAAGEIRLLAKRNADNRVAIAEAGAIPLL---------VGLLSTPDSRIQEHSVTALLNL 421
Query: 181 PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDE 240
+ E I S A I + +L S+E R N+AA + L+ + E + I L
Sbjct: 422 SICENNKGAIVS-AGAIPGIVQVLKKGSMEARENAAATL-FSLSVI--DENKVTIGALGA 477
Query: 241 IFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDA 300
I V+ L N + RG K ALF LC+ + + KA+ AG TL L +
Sbjct: 478 IPPLVV--LLNEGTQ-RGKKDAATALFNLCIYQGNKGKAIRAGVIPTLTRLLTEPGSGMV 534
Query: 301 ERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQ 360
+ ALA + +L P G A + VP LV+ I S R E AA L LCS +
Sbjct: 535 DEALAILAILSSHPEGKAIIG-SSDAVPSLVEFIRTGSPRNRENAAAVLVHLCSGDPQHL 593
Query: 361 RDAVSAGVLTQLLLLVQSDCTDRAKRK-AQLLLKLLR 396
+A G++ L+ L + TDR KRK AQLL ++ R
Sbjct: 594 VEAQKLGLMGPLIDLA-GNGTDRGKRKAAQLLERISR 629
>sp|Q058P4|PUB30_ARATH U-box domain-containing protein 30 OS=Arabidopsis thaliana GN=PUB30
PE=2 SV=1
Length = 448
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 119/393 (30%), Positives = 188/393 (47%), Gaps = 24/393 (6%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
++ LDL IP F CPISLE M DPVT+CTGQTY+R +I W G+ TCP T L D
Sbjct: 56 IKELDLQ-DIPSVFICPISLEPMQDPVTLCTGQTYERLNIHKWFNLGHLTCPTTMQELWD 114
Query: 65 FTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSA 124
T+ PN TL LI W F Q+ K+ +E R + + + +R+ A
Sbjct: 115 DTVTPNKTLHHLIYTW------FS-QKYVLMKKRSEDVQGRAIEILGTLKKAKGQARVHA 167
Query: 125 LRRLRGLARDSDKNRSLISSHNVRAILSQVF--FTNINVKTASSPELAHESLALLVMFPL 182
L L+ + R + +++S + FT S + E +A+LV L
Sbjct: 168 LSELKQIVIAHLMARKTVVEEGGVSVISSLLGPFT--------SHAVGSEVVAILVSLDL 219
Query: 183 TETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIF 242
+ A K++ + +L S E ++N A LI + + RA++ + +
Sbjct: 220 DSDSKSGLMQPA-KVSLIVDMLNDGSNETKINCARLIR---GLVEEKGFRAELVSSHSLL 275
Query: 243 EGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAER 302
G++ ++K+ + G+ ++ L + + KQ R V+ GA LVD L D E
Sbjct: 276 VGLMRLVKD-KRHRNGVSPALRLLKPISVHKQVRSLMVSIGAVPQLVDILPSLDPECLEL 334
Query: 303 ALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCS-ASERCQR 361
AL ++ LC G + A T+P V+ ++++S+ T YA L ++C A E C
Sbjct: 335 ALFVLDALCTDVEGRVAVKDSANTIPYTVRVLMRVSENCTNYALSILWSVCKLAPEECSP 394
Query: 362 DAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKL 394
AV G+ +LLL++QS C K+++ LLKL
Sbjct: 395 LAVEVGLAAKLLLVIQSGCDAALKQRSAELLKL 427
>sp|Q9C9A6|PUB10_ARATH U-box domain-containing protein 10 OS=Arabidopsis thaliana GN=PUB10
PE=2 SV=1
Length = 628
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/408 (31%), Positives = 194/408 (47%), Gaps = 46/408 (11%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
++ IP F CPISLELM DP V TGQTY+R I+ W+ GN +CP T+ L +FTL PN
Sbjct: 240 NLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPKTQQKLENFTLTPN 299
Query: 71 HTLRRLIQDWCVAN---RSFGVQRIPTPKQ-------PAEPSLVRTLLNQASSESNTYGS 120
+ LR LI WC + + G T + S +R L+ + SS+S
Sbjct: 300 YVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRALVCKLSSQS--IED 357
Query: 121 RLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMF 180
R +A+ +R L++ S NR LI+ +L ++ ++ + +T E+ ++
Sbjct: 358 RRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTET-------QENAVTCILN 410
Query: 181 PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAA-LIEIVLAGMRSQELRAQISNLD 239
E+ A +TS+ +L S+E R N+AA L + LA + A
Sbjct: 411 LSIYEHNKELIMLAGAVTSIVLVLRAGSMEARENAAATLFSLSLADENKIIIGAS----- 465
Query: 240 EIFEGVIDILKNLSSYP--RGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLAD-FD 296
G I L +L Y RG K ALF LC+ + + +AV AG + LV L D
Sbjct: 466 ----GAIMALVDLLQYGSVRGKKDAATALFNLCIYQGNKGRAVRAGIVKPLVKMLTDSSS 521
Query: 297 KCDAERALATVELLCRIPAGCAEFAEHAL----TVPLLVKTILKISDRATEYAAGALAAL 352
+ A+ AL + +L + A+ A+ +P L+ + K R E AA L L
Sbjct: 522 ERMADEALTILSVLA-----SNQVAKTAILRANAIPPLIDCLQKDQPRNRENAAAILLCL 576
Query: 353 CSASERCQRDAVSAGVLTQLLLLVQ--SDCTDRAKRKAQLLLKLLRDS 398
C +R +S G L ++ L++ D T+RAKRKA LL+LLR S
Sbjct: 577 C---KRDTEKLISIGRLGAVVPLMELSRDGTERAKRKANSLLELLRKS 621
>sp|Q9FHN9|PUB31_ARATH U-box domain-containing protein 31 OS=Arabidopsis thaliana GN=PUB31
PE=2 SV=1
Length = 444
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 116/389 (29%), Positives = 191/389 (49%), Gaps = 31/389 (7%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
+IP F CPISLE M DPVT+CTGQTY+R +I W G+ TCP T L D + PN T
Sbjct: 59 EIPSVFICPISLEPMQDPVTLCTGQTYERSNILKWFNIGHCTCPTTMQELWDDLVTPNKT 118
Query: 73 LRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALRRLRGLA 132
L +LI W F Q+ K+ +E R + L LR+ +G A
Sbjct: 119 LHQLIYTW------FS-QKYVLMKKRSEDVQGRAI------------EILGTLRKAKGKA 159
Query: 133 RDS--DKNRSLISSHNV--RAILSQ--VFFTNINVKTASSPELAHESLALLVMFPLTETE 186
+ + + ++ +H + + ++ + VF + + +S + E++A+LV L
Sbjct: 160 KVHALSELKQVVMAHAIAKKTVVDEGGVFVISSLLSPFTSHAVGSEAIAILVNLELDSDS 219
Query: 187 CMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVI 246
+ A +++ + +L SIE ++N A LI + + + RA++ + + G++
Sbjct: 220 KAGLMQPA-RVSLMVDMLNDGSIETKINCARLIGRL---VEEKGFRAELVSSHSLLVGLM 275
Query: 247 DILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALAT 306
++K+ G+ + L ++ + KQ R V GA LVD L D E AL
Sbjct: 276 RLVKD-RRRRNGVSPALTLLKSVSVHKQVRNLLVRIGAVPQLVDVLPCLDVECLESALFV 334
Query: 307 VELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCS-ASERCQRDAVS 365
++ LC G + T+P V+ ++K+S++ T YA L ++C ASE C AV
Sbjct: 335 LDSLCLESEGRIALKDSVNTIPHTVRLLMKVSEKCTNYAISILWSVCKLASEECSSLAVE 394
Query: 366 AGVLTQLLLLVQSDCTDRAKRKAQLLLKL 394
G+ +LLL++QS C K+++ LLKL
Sbjct: 395 VGLAAKLLLVIQSGCDPALKQRSAELLKL 423
>sp|Q9ZV31|PUB12_ARATH U-box domain-containing protein 12 OS=Arabidopsis thaliana GN=PUB12
PE=2 SV=1
Length = 654
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 123/403 (30%), Positives = 187/403 (46%), Gaps = 55/403 (13%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P FRCPISLELM DPV V +GQTY+R I+ W+ G+ TCP T+ LT + PN+ LR
Sbjct: 257 PEEFRCPISLELMTDPVIVSSGQTYERECIKKWLEGGHLTCPKTQETLTSDIMTPNYVLR 316
Query: 75 RLIQDWCVANRSFGVQRIPTPKQPA-----------------EPSLVRTLLNQASSESNT 117
LI WC +N I PK+P E + + LL + +S+
Sbjct: 317 SLIAQWCESNG------IEPPKRPNISQPSSKASSSSSAPDDEHNKIEELLLKLTSQQPE 370
Query: 118 YGSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHE-SLAL 176
R SA +R LA+ ++ NR I++ +L +N+ T S+ E ++
Sbjct: 371 --DRRSAAGEIRLLAKQNNHNRVAIAASGAIPLL-------VNLLTISNDSRTQEHAVTS 421
Query: 177 LVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQIS 236
++ + + +I + + + +L S+E R N+AA + +S
Sbjct: 422 ILNLSICQENKGKIVYSSGAVPGIVHVLQKGSMEARENAAATL-------------FSLS 468
Query: 237 NLDEI-----FEGVIDILKNLSSY--PRGLKVGIKALFALCLVKQTRYKAVAAGAAETLV 289
+DE G I L L S RG K ALF LC+ + + KAV AG L+
Sbjct: 469 VIDENKVTIGAAGAIPPLVTLLSEGSQRGKKDAATALFNLCIFQGNKGKAVRAGLVPVLM 528
Query: 290 DRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGAL 349
L + + + +L+ + +L P G +E A VP+LV I S R E +A L
Sbjct: 529 RLLTEPESGMVDESLSILAILSSHPDGKSEVGA-ADAVPVLVDFIRSGSPRNKENSAAVL 587
Query: 350 AALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLL 392
LCS +++ +A G++ LL+ + + TDR KRKA LL
Sbjct: 588 VHLCSWNQQHLIEAQKLGIM-DLLIEMAENGTDRGKRKAAQLL 629
>sp|Q0IMG9|SL11_ORYSJ E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica
GN=SPL11 PE=1 SV=2
Length = 694
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 189/394 (47%), Gaps = 27/394 (6%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ IP FRCPISLELM DPV V TGQTY+R IE W+A+G+ TCP T+ ++ L PN+
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQP------AEPSLVRTLLNQASSESNTYGSRLSAL 125
LR LI WC N +R P +P +E + + LL++ S +T R SA
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCS-PDTEEQR-SAA 388
Query: 126 RRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTET 185
LR LA+ + NR I+ + + ++ H ALL + +
Sbjct: 389 AELRLLAKRNANNRICIAEAGA------IPLLLSLLSSSDLRTQEHAVTALLNLSIHEDN 442
Query: 186 ECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGV 245
+ I+S A + S+ +L + S+E R N+AA + L+ + E + I + I V
Sbjct: 443 KASIISSGA--VPSIVHVLKNGSMEARENAAATL-FSLSVI--DEYKVTIGGMGAIPALV 497
Query: 246 IDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALA 305
+ +L S RG K ALF LC+ + + +A+ AG ++ + + + A+A
Sbjct: 498 V-LLGEGSQ--RGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA 554
Query: 306 TVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQR--DA 363
+ +L P G A A VP+LV+ I + R E AA + LCS A
Sbjct: 555 ILSILSSHPEGKAAIGA-AEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARA 613
Query: 364 VSAGVLTQLLLLVQSDCTDRAKRKA-QLLLKLLR 396
G++ L L + TDR KRKA QLL ++ R
Sbjct: 614 QECGIMVPLRELAL-NGTDRGKRKAVQLLERMSR 646
>sp|A2ZLU6|SL11_ORYSI Protein spotted leaf 11 OS=Oryza sativa subsp. indica GN=SPL11 PE=1
SV=2
Length = 694
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 126/394 (31%), Positives = 189/394 (47%), Gaps = 27/394 (6%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ IP FRCPISLELM DPV V TGQTY+R IE W+A+G+ TCP T+ ++ L PN+
Sbjct: 271 ITIPDEFRCPISLELMKDPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNY 330
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQP------AEPSLVRTLLNQASSESNTYGSRLSAL 125
LR LI WC N +R P +P +E + + LL++ S +T R SA
Sbjct: 331 VLRSLISQWCETNGMEPPKRSTQPNKPTPACSSSERANIDALLSKLCS-PDTEEQR-SAA 388
Query: 126 RRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTET 185
LR LA+ + NR I+ + + ++ H ALL + +
Sbjct: 389 AELRLLAKRNANNRICIAEAGA------IPLLLSLLSSSDLRTQEHAVTALLNLSIHEDN 442
Query: 186 ECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGV 245
+ I+S A + S+ +L + S+E R N+AA + L+ + E + I + I V
Sbjct: 443 KASIISSGA--VPSIVHVLKNGSMEARENAAATL-FSLSVI--DEYKVTIGGMGAIPALV 497
Query: 246 IDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALA 305
+ +L S RG K ALF LC+ + + +A+ AG ++ + + + A+A
Sbjct: 498 V-LLGEGSQ--RGKKDAAAALFNLCIYQGNKGRAIRAGLVPLIMGLVTNPTGALMDEAMA 554
Query: 306 TVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQR--DA 363
+ +L P G A A VP+LV+ I + R E AA + LCS A
Sbjct: 555 ILSILSSHPEGKAAIGA-AEPVPVLVEMIGSGTPRNRENAAAVMLHLCSGEHHLVHLARA 613
Query: 364 VSAGVLTQLLLLVQSDCTDRAKRKA-QLLLKLLR 396
G++ L L + TDR KRKA QLL ++ R
Sbjct: 614 QECGIMVPLRELAL-NGTDRGKRKAVQLLERMSR 646
>sp|Q8VZ40|PUB14_ARATH U-box domain-containing protein 14 OS=Arabidopsis thaliana GN=PUB14
PE=1 SV=1
Length = 632
Score = 135 bits (340), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/394 (30%), Positives = 187/394 (47%), Gaps = 27/394 (6%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP +FRCPISLELM DPV V TGQTY+R SI+ W+ G+ TCP ++ L L PN+ L
Sbjct: 248 IPEYFRCPISLELMKDPVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVL 307
Query: 74 RRLIQDWCVAN-----RSFGVQRIP----TPKQPAEPSLVRTLLNQASSESNTYGSRLSA 124
+ LI WC +N ++ G R + + + V +LL + + + T + +A
Sbjct: 308 KSLIALWCESNGIELPQNQGSCRTTKIGGSSSSDCDRTFVLSLLEKLA--NGTTEQQRAA 365
Query: 125 LRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTE 184
LR LA+ + NR I+ +L ++ ++ P S+ L+ + E
Sbjct: 366 AGELRLLAKRNVDNRVCIAEAGAIPLLVELL-------SSPDPRTQEHSVTALLNLSINE 418
Query: 185 TECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEG 244
I DA IT + +L + S+E R N+AA + L+ + ++ + +
Sbjct: 419 GNKGAIV-DAGAITDIVEVLKNGSMEARENAAATL-FSLSVIDENKVAIGAAGAIQAL-- 474
Query: 245 VIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERAL 304
I +L+ RG K A+F LC+ + + +AV G + L L D + AL
Sbjct: 475 -ISLLE--EGTRRGKKDAATAIFNLCIYQGNKSRAVKGGIVDPLTRLLKDAGGGMVDEAL 531
Query: 305 ATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAV 364
A + +L G AE A ++P+LV+ I S R E AA L LC + A
Sbjct: 532 AILAILSTNQEGKTAIAE-AESIPVLVEIIRTGSPRNRENAAAILWYLCIGNIERLNVAR 590
Query: 365 SAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDS 398
G L L + + TDRAKRKA LL+L++ +
Sbjct: 591 EVGADVALKELTE-NGTDRAKRKAASLLELIQQT 623
>sp|Q9SF15|PUB24_ARATH E3 ubiquitin-protein ligase PUB24 OS=Arabidopsis thaliana GN=PUB24
PE=1 SV=1
Length = 456
Score = 129 bits (325), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 127/438 (28%), Positives = 188/438 (42%), Gaps = 59/438 (13%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPL-TDFTLIPN 70
++IP +F CPISLE+M DPVT +G TYDR +I W+ +CPVT+ PL D L PN
Sbjct: 8 IEIPNYFICPISLEIMKDPVTTVSGITYDRQNIVKWLEKV-PSCPVTKQPLPLDSDLTPN 66
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPK-QPAEPSLVRTLLNQASSESNTYGSRLSALRRLR 129
H LRRLIQ WCV N + GV RI TP+ P + ++V + N G R L++L
Sbjct: 67 HMLRRLIQHWCVENETRGVVRISTPRVPPGKLNVVEEIKNLKKFGQEALG-REETLQKLE 125
Query: 130 GLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAH-------ESLALLVMFPL 182
LA D + NR L+ V S + F VK S E ESL LL + +
Sbjct: 126 VLAMDGN-NRRLMCECGVHK--SLILFV---VKCTSEDEDGRRRIKGLDESLRLLHLIGI 179
Query: 183 TETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLD-EI 241
+ I + D++ + + H S A ++L + + L+ EI
Sbjct: 180 PSNDAKTILMENDRVMESLTWVLHQE---DFLSKAYTIVLLRNLTEYTSSHIVERLNPEI 236
Query: 242 FEGVIDILKNL-----------------SSYPRGLKVGIKALFALCLVKQ---------- 274
F+G+I LK++ SS P K L ++KQ
Sbjct: 237 FKGIIGFLKDVVNSVNRTSPTVRETVQSSSRPSLGKTEPSKLDHSLVIKQAVTAALMILL 296
Query: 275 -------TRYKAVAAGAAETLVDRLADF--DKCDAERALATVELLCRIPAGCAEFAEHAL 325
R V GA L++ + +K E L + LC G AE H
Sbjct: 297 ETSSWSRNRSLLVDLGAVSELIELEISYTGEKRITELMLGVLSRLCCCANGRAEILAHRG 356
Query: 326 TVPLLVKTILKISDRATEYAAGALAALC--SASERCQRDAVSAGVLTQLLLLVQSDCTDR 383
+ ++ K +L++S A + A L + S + V+ G + +L ++ DC
Sbjct: 357 GIAVVTKRLLRVSPAADDRAISILTTVSKFSPENMVVEEMVNVGTVEKLCSVLGMDCGLN 416
Query: 384 AKRKAQLLLKLLRDSWPQ 401
K KA+ +LK D W +
Sbjct: 417 LKEKAKEILKDHFDEWKK 434
>sp|Q681N2|PUB15_ARATH U-box domain-containing protein 15 OS=Arabidopsis thaliana GN=PUB15
PE=2 SV=2
Length = 660
Score = 125 bits (313), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 116/392 (29%), Positives = 197/392 (50%), Gaps = 25/392 (6%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
S+ +P+ F CPI+LE+M DPV + TGQTY++ SI+ W G+ TCP TR L +L PN
Sbjct: 287 SLILPHEFLCPITLEIMLDPVIIATGQTYEKESIQKWFDAGHKTCPKTRQELDHLSLAPN 346
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALRRLRG 130
L+ LI WC N ++ +P E +LL +A S S R S ++++R
Sbjct: 347 FALKNLIMQWCEKNNFKIPEKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRS-VKQMRL 405
Query: 131 LARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETEC-ME 189
LAR++ +NR LI++ +L Q+ S P+ + A+ + L+ E +
Sbjct: 406 LARENPENRVLIANAGAIPLLVQLL---------SYPDSGIQENAVTTLLNLSIDEVNKK 456
Query: 190 IASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGV---I 246
+ S+ I ++ +L + + E R NSAA + L+ + ++ +SN G+ +
Sbjct: 457 LISNEGAIPNIIEILENGNREARENSAAAL-FSLSMLDENKVTIGLSN------GIPPLV 509
Query: 247 DILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALAT 306
D+L++ RG K + ALF L L + +A+ AG + L++ L D + + AL+
Sbjct: 510 DLLQH--GTLRGKKDALTALFNLSLNSANKGRAIDAGIVQPLLNLLKDKNLGMIDEALSI 567
Query: 307 VELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSA 366
+ LL P G + + + LV+ I + + + E A L L S + A+
Sbjct: 568 LLLLASHPEGRQAIGQLSF-IETLVEFIRQGTPKNKECATSVLLELGSNNSSFILAALQF 626
Query: 367 GVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDS 398
GV + L+ + + T+RA+RKA L++L+ S
Sbjct: 627 GVY-EYLVEITTSGTNRAQRKANALIQLISKS 657
>sp|Q9LSA6|PUB29_ARATH U-box domain-containing protein 29 OS=Arabidopsis thaliana GN=PUB29
PE=1 SV=1
Length = 415
Score = 122 bits (305), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/417 (27%), Positives = 197/417 (47%), Gaps = 62/417 (14%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
+ +P F+CPISL++M PV++CTG TYDR SI+ W+ GN TCP T L +PN
Sbjct: 10 ITVPSFFKCPISLDVMRSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQLLKTKDFVPNL 69
Query: 72 TLRRLIQDW--CVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALRRLR 129
TL+RLI W + R G + P E E N RL +L L
Sbjct: 70 TLQRLINIWSDSIGRRHNGDSPVLNPPSGREVP--------TKEEVNVLLERLMSLENLM 121
Query: 130 GLAR---DSDKNRSLISSHN---------VRAILSQVFFTNINVKTASSPELAHESLALL 177
+ R DSD NR +S +R +++ + ++ S ++ E L+ L
Sbjct: 122 KIVRFVKDSDSNREFLSKKMEFVPMLVDIIRTKKTKIELVIMAIRILDSIKVDRERLSNL 181
Query: 178 VMFPLTETECMEIASD-ADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQIS 236
++ A+D D +T++ + ++E ++ S +++ + +S+ + A+
Sbjct: 182 ML-----------ANDGGDCLTAILLAIQRGNLESKIESVRVLDWISFDAKSKLMIAE-- 228
Query: 237 NLDEIFEGVI-DILKNL----SSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDR 291
+GV+ +++K++ SS P ++ + L + K+ R K +AA A + D
Sbjct: 229 -----RDGVLTEMMKSISITESSDPSLIEASLSFLITISKSKRVRSKLIAAKAITKIKDI 283
Query: 292 LADFDKCDA---ERALATVELLCRIPAGCAEFA--EHALTVPLLVKTILKISDRATEYAA 346
L + E++L +E L G E ++ V +VK +LK+S ATE+A
Sbjct: 284 LLTETLTNVAVTEKSLKLLETLSSKREGRLEICGDDNGRCVEGVVKKLLKVSTTATEHAV 343
Query: 347 GALAALC-------SASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLR 396
L LC + E +R S GV T+LL+++QS+C+ ++ A+ L+K+L+
Sbjct: 344 TILWCLCYVFREDKTVEETVER---SNGV-TKLLVVIQSNCSAMVRQMAKDLIKVLK 396
>sp|Q9C7R6|PUB17_ARATH U-box domain-containing protein 17 OS=Arabidopsis thaliana GN=PUB17
PE=2 SV=1
Length = 729
Score = 119 bits (299), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 116/410 (28%), Positives = 186/410 (45%), Gaps = 45/410 (10%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
D + +P F CPISL+LM DPV + TGQTYDR SI W+ G+ TCP T L D ++
Sbjct: 300 DTFITVPKDFVCPISLDLMTDPVIISTGQTYDRNSIARWIEEGHCTCPKTGQMLMDSRIV 359
Query: 69 PNHTLRRLIQDWCVANR-SFGVQRIPTPKQPAEPSLVRTLLNQASSESN----------- 116
PN L+ LI WC A+ S+ + +P + S L +A+ E+N
Sbjct: 360 PNRALKNLIVQWCTASGISYESEFTDSPNE----SFASALPTKAAVEANKATVSILIKYL 415
Query: 117 ---TYGSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHE- 172
+ ++ A R +R LA+ +NR+ I+ L ++ S +A E
Sbjct: 416 ADGSQAAQTVAAREIRLLAKTGKENRAYIAEAGAIPHLCRLL--------TSENAIAQEN 467
Query: 173 SLALLVMFPLTETECMEIASDADKITSLSSLLFHS-SIEVRVNSAALIEIVLAGMRSQEL 231
S+ ++ + E I + D + S+ S+L ++E + N+AA + + A E
Sbjct: 468 SVTAMLNLSIYEKNKSRIMEEGDCLESIVSVLVSGLTVEAQENAAATLFSLSA---VHEY 524
Query: 232 RAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDR 291
+ +I+ +D+ E + +L+N PRG K + AL+ L + + G +LV
Sbjct: 525 KKRIAIVDQCVEALALLLQN--GTPRGKKDAVTALYNLSTHPDNCSRMIEGGGVSSLVGA 582
Query: 292 LADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAA 351
L ++ AE A + LL R G + V L+ + + R E A AL
Sbjct: 583 LK--NEGVAEEAAGALALLVRQSLGAEAIGKEDSAVAGLMGMMRCGTPRGKENAVAALLE 640
Query: 352 LC-----SASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLR 396
LC + +E+ R AG+L LL T RA+RKA L ++ +
Sbjct: 641 LCRSGGAAVAEKVLRAPAIAGLLQTLLF----TGTKRARRKAASLARVFQ 686
>sp|O81902|PUB8_ARATH U-box domain-containing protein 8 OS=Arabidopsis thaliana GN=PUB8
PE=2 SV=1
Length = 374
Score = 118 bits (296), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 112/393 (28%), Positives = 189/393 (48%), Gaps = 33/393 (8%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDF-TLI 68
++ +P FRCPISLE+M DPV + +G T+DR SI+ W+ +GN TCP+T+ PL++ LI
Sbjct: 1 MAFDLPNDFRCPISLEIMSDPVILQSGHTFDRVSIQQWIDSGNRTCPITKLPLSETPYLI 60
Query: 69 PNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALRRL 128
PNH LR LI ++ A+ S P +Q S + L++ S+S++ S+L +L RL
Sbjct: 61 PNHALRSLILNF--AHVSLKESSRPRTQQEHSHSQSQALISTLVSQSSSNASKLESLTRL 118
Query: 129 -RGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETEC 187
R RDS R + S VRA L V N ++ E L++ E
Sbjct: 119 VRLTKRDSSIRRKVTESGAVRAALDCVDSCN---------QVLQEKSLSLLLNLSLE--- 166
Query: 188 MEIASDADKITSLSSLLFHSSIEV-RVNS---AALIEIVLAGMRSQEL-RAQISNLDEIF 242
D +K+ ++ + + V RV S A+ +L + E+ +A I + +
Sbjct: 167 -----DDNKVGLVADGVIRRIVTVLRVGSPDCKAIAATLLTSLAVVEVNKATIGSYPDAI 221
Query: 243 EGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAER 302
++ +L+ + R K AL+ALC R + V G+ LV+ AD ER
Sbjct: 222 SALVSLLRVGNDRER--KESATALYALCSFPDNRKRVVDCGSVPILVE-AAD---SGLER 275
Query: 303 ALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRD 362
A+ + LL + G E ++ + V +LV + + + +Y+ L LC S +
Sbjct: 276 AVEVLGLLVKCRGGREEMSKVSGFVEVLVNVLRNGNLKGIQYSLFILNCLCCCSGEIVDE 335
Query: 363 AVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLL 395
GV+ ++ + + +++ +R A +L+ L
Sbjct: 336 VKREGVV-EICFGFEDNESEKIRRNATILVHTL 367
>sp|Q9FLF4|PUB27_ARATH U-box domain-containing protein 27 OS=Arabidopsis thaliana GN=PUB27
PE=2 SV=1
Length = 420
Score = 117 bits (292), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/412 (24%), Positives = 193/412 (46%), Gaps = 40/412 (9%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
DL + +P FRCPISL++M PV++CTG TYDR SI+ W+ GN TCP T L + I
Sbjct: 5 DLCITVPTFFRCPISLDVMKSPVSLCTGVTYDRASIQRWLDGGNNTCPATMQILQNKDFI 64
Query: 69 PNHTLRRLIQDW--------CVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGS 120
PN TL+RLI+ W CV + PT + A+ +++ E
Sbjct: 65 PNRTLQRLIEIWSDSVRRRTCVESAELAA---PTRDEIADA------IDRVKIEKEERDD 115
Query: 121 RLSALRRLRGLARDSDKNRSLISSHN--VRAILSQVFFTNINVKTASSPELAHESLALLV 178
R L ++ R+SD NR ++ + V+ ++ + + +A+ + E++ +L
Sbjct: 116 R-EVLSKIVRFGRESDDNRGFLAGKDDFVKLLVDLINQVDFETTSAAKSLVVQEAVKILS 174
Query: 179 MFPLTETE-----CMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRA 233
++ + + + D+++ + L ++E++++ A L+E + S+ L A
Sbjct: 175 TIRSKVSDRRRFSNLILTNGRDRLSVIVYLFKTGNVELKIDCAGLLEFIAVDAESKLLIA 234
Query: 234 QISNLDEIFEGVIDILKNLS--SYPRGLKVGIKALFALCLVKQTRY----KAVAAGAAET 287
+ L + +++K++S S ++ + L A+ K+ + + + +
Sbjct: 235 ERDGL------ITELMKSISKDSDLSLIESSLSCLIAISSPKRVKLNLLREKLIGDVTKL 288
Query: 288 LVDRLADFDKCDAERALATVELLCRIPAGCAEF-AEHALTVPLLVKTILKISDRATEYAA 346
L D + E+ L +E+L G +E + +VK ++K+S ATE+A
Sbjct: 289 LSDSTSSLSVSVTEKCLKLLEILASTKEGRSEICGGDGECLKTVVKKLMKVSTAATEHAV 348
Query: 347 GALAALCS--ASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLR 396
L ++ ++ S +T++LLL+QS+C+ +R LLK+ +
Sbjct: 349 TVLWSVSYLFKEDKALEAVTSVNGVTKILLLLQSNCSPAVRRMLTDLLKVFK 400
>sp|Q6EUK7|PUB04_ORYSJ U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica
GN=PUB4 PE=2 SV=1
Length = 728
Score = 114 bits (286), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 112/408 (27%), Positives = 181/408 (44%), Gaps = 36/408 (8%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
D S +P F CPISL+LM DPV TGQTYDRPSI W+ G++TCP + L D L+
Sbjct: 292 DTSFSVPKEFSCPISLDLMRDPVVASTGQTYDRPSIIQWIEEGHSTCPNSGQTLADHRLV 351
Query: 69 PNHTLRRLIQDWCVANRSFGVQR-IPTPKQPAEPSLVRTLLNQASSESNTYGSRL----- 122
PN LR LI WC +G+Q P + + + ++A+ E+N +R+
Sbjct: 352 PNRALRSLISQWCGV---YGLQYDSPESNEGMAECVAASCSSRAAMEANKATARILVRML 408
Query: 123 ---------SALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSPELAHES 173
A + +R LA+ +NR+ I+ +L ++ +N + E A +
Sbjct: 409 EDGSENVKAVAAKEIRLLAKTGKQNRAFIADLGAIPLLCRLLLSN----DWMAQENAVTA 464
Query: 174 LALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAA-LIEIVLAGMRSQELR 232
L L +F + ME I + L + E + N+AA L + + +
Sbjct: 465 LLNLSIFEPNKGRIMEQEGCLRLIVGV--LQNGWTTEAKENAAATLFSLSVV----HNFK 518
Query: 233 AQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRL 292
I N E + +L +S RG K + ALF L ++ + + + A L+ L
Sbjct: 519 KLIMNEPGAVEELASMLTKGTS--RGKKDAVMALFNLSTHPESSARMLESCAVVALIQSL 576
Query: 293 ADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAAL 352
+ +E A + LL + P+ + LV + + + + E A AL +
Sbjct: 577 R--NDTVSEEAAGALALLMKQPSIVHLVGSSETVITSLVGLMRRGTPKGKENAVSALYEI 634
Query: 353 C--SASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDS 398
C S QR A G L ++ + + T RAK+KA L++K+ + S
Sbjct: 635 CRRGGSALVQRVAKIPG-LNTVIQTITLNGTKRAKKKASLIVKMCQRS 681
>sp|Q9LXE3|PUB28_ARATH U-box domain-containing protein 28 OS=Arabidopsis thaliana GN=PUB28
PE=1 SV=1
Length = 409
Score = 108 bits (271), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/395 (25%), Positives = 182/395 (46%), Gaps = 28/395 (7%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
+P F+CPISL++M PV++ TG TYDR SI+ W+ GN TCP T L + +PN TL
Sbjct: 11 VPCFFKCPISLDVMKSPVSLSTGVTYDRVSIQRWLDDGNNTCPATMQILQNKEFVPNLTL 70
Query: 74 RRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSALRRLRGLAR 133
RLI W S + R + P + R +N A S + R AR
Sbjct: 71 HRLIDHW-----SDSINRRADSESPESDTPTRDEINAAIERFRIENDARSKILR---FAR 122
Query: 134 DSDKNRSLISSH-NVRAILSQVFFTNINVKTASSPELAHESLALLVM-----FPLTETEC 187
+SD+NR ++ + A+L + + N + S L E++ +L M F
Sbjct: 123 ESDENREFLAGKDDFVAMLVDLISDSRNF-SDSQLLLVGEAVKILSMIRRKIFDRRRLSN 181
Query: 188 MEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVID 247
+ + + D +TS L+ + +++++ +A++E + S+ + A+ L V +
Sbjct: 182 LILTNGGDCLTSFFLLIKRGNPKLKIDCSAVLEFIAVDAESKLIIAKGEGL------VTE 235
Query: 248 ILK--NLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLAD--FDKCDAERA 303
I+K + S ++ + L A+ K+ + + L L D E+
Sbjct: 236 IIKLISSDSDSSLIEANLSLLIAIASSKRVKLALIREKLVTKLTSLLTDPTTSVSVTEKC 295
Query: 304 LATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCS--ASERCQR 361
L +E + G +E + + V +V ++K+S ATE+A L ++C ++ Q
Sbjct: 296 LKLLEAISSCKEGRSEICD-GVCVETVVNKLMKVSTAATEHAVTVLWSVCYLFKEKKAQD 354
Query: 362 DAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLR 396
+ +T++LLL+QS+C+ + LLK+ +
Sbjct: 355 AVIRINGVTKILLLLQSNCSLTVRHMLTDLLKVFK 389
>sp|Q9SRT0|PUB9_ARATH U-box domain-containing protein 9 OS=Arabidopsis thaliana GN=PUB9
PE=1 SV=1
Length = 460
Score = 105 bits (261), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 113/414 (27%), Positives = 183/414 (44%), Gaps = 48/414 (11%)
Query: 4 SLEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLT 63
SLE L+ +V P FRCP+S ELM DPV + +GQTYD+ I+ W+++GN TCP T+ L
Sbjct: 65 SLEMLE-TVSCPEEFRCPLSNELMRDPVVLASGQTYDKLFIQKWLSSGNRTCPKTQQVLP 123
Query: 64 DFTLIPNHTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRL- 122
L PN +R +I WC N G++ K P+LV S+ + S L
Sbjct: 124 HTALTPNLLIREMISKWCKKN---GLE----TKSQYHPNLVNEDETVTRSDREIFNSLLC 176
Query: 123 -----------SALRRLRGLARDSDKNRSLI--SSHNVRAILSQVFFTNINVKTASSPE- 168
SA + LR L R + R+L S + +++ + S+P+
Sbjct: 177 KVSSSNLQDQKSAAKELRLLTRKGTEFRALFGESPDEITRLVNPLLH-------GSNPDE 229
Query: 169 -LAHESLALLVMFPLTETECME-IASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGM 226
L + + L+ + + + + + + I L L ++ R N+AA I L+ +
Sbjct: 230 KLQEDVVTTLLNISIHDDSNKKLVCENPNVIPLLIDALRRGTVATRSNAAAAI-FTLSAL 288
Query: 227 RSQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAE 286
S ++ S I + +ID+L+ P +K A+F LC+ + R +AV GA
Sbjct: 289 DSNKVLIGKSG---ILKPLIDLLE--EGNPLAIKDVAAAIFTLCIAHENRSRAVRDGAVR 343
Query: 287 TLVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAA 346
L ++++ D LA + +L E E LL T R E A
Sbjct: 344 VLGKKISNGLYVD--ELLAILAMLVTHWKAVEELGELGGVSWLLKITRESECKRNKENAI 401
Query: 347 GALAALC----SASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLR 396
L +C + + + + + G +T+L + T RA+RKA +L LR
Sbjct: 402 VILHTICFSDRTKWKEIKEEENAHGTITKL----SREGTSRAQRKANGILDRLR 451
>sp|Q9LZW3|PUB16_ARATH U-box domain-containing protein 16 OS=Arabidopsis thaliana GN=PUB16
PE=2 SV=1
Length = 674
Score = 92.0 bits (227), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 107/419 (25%), Positives = 176/419 (42%), Gaps = 41/419 (9%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
IP FRCPI+LELM DPV V TGQTYDR SI+ W+ +G+ TCP T L +L+PN
Sbjct: 273 NIPADFRCPITLELMRDPVVVATGQTYDRESIDLWIQSGHNTCPKTGQVLKHTSLVPNRA 332
Query: 73 LRRLIQDWCVANR-------SFGVQRIPTPKQPAEPSLVRTLLNQASSESNTYGSRLSAL 125
L+ LI WC + G + P + ++ + L + S +++ G +
Sbjct: 333 LKNLIVLWCRDQKIPFELYGDGGGEPAPCKEAVEFTKMMVSFLIEKLSVADSNG----VV 388
Query: 126 RRLRGLARDSDKNRSLISSHN-----VRAILSQVFFTNINVKTASSPELAHESLALLVMF 180
LR LA+ R+ I+ VR + ++ IN T ++ L +
Sbjct: 389 FELRALAKSDTVARACIAEAGAIPKLVRYLATECPSLQINAVT---------TILNLSIL 439
Query: 181 PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDE 240
+T ME +D + L ++ E + N+AA + LAG+ + R ++
Sbjct: 440 EQNKTRIME--TDGALNGVIEVLRSGATWEAKANAAATL-FSLAGVSA--YRRRLGRKAR 494
Query: 241 IFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDA 300
+ G++D+ K + + + + A+ L ++ + V AG D + +
Sbjct: 495 VVSGLVDLAKQGPTSSK--RDALVAILNLVAERENVGRFVEAGVMGAAGDAFQELPEEAV 552
Query: 301 ERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAALC--SASER 358
A V G + + LL + + + +D E AA L +C SE
Sbjct: 553 AVVEAVVR-----RGGLMAVSAAFSLIRLLGEVMREGADTTRESAAATLVTMCRKGGSEL 607
Query: 359 CQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQDSIGNSDDFACSEVVP 417
A G+ + ++ + T R RKA L++ LR W N+ S VVP
Sbjct: 608 VAEMAAIPGIERVIWEMIGAG-TARGGRKAASLMRYLR-RWAAGDTHNTAAETQSIVVP 664
>sp|Q8GWV5|PUB3_ARATH U-box domain-containing protein 3 OS=Arabidopsis thaliana GN=PUB3
PE=2 SV=2
Length = 760
Score = 91.7 bits (226), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 39/75 (52%), Positives = 50/75 (66%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
+ IP +FRCP+S ELM DPV V +GQT+DR SI+ W+ G CP TR LT LIPN
Sbjct: 235 GISIPPYFRCPLSTELMLDPVIVASGQTFDRTSIKKWLDNGLAVCPRTRQVLTHQELIPN 294
Query: 71 HTLRRLIQDWCVANR 85
+T++ +I W ANR
Sbjct: 295 YTVKAMIASWLEANR 309
Score = 52.0 bits (123), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/141 (34%), Positives = 66/141 (46%), Gaps = 3/141 (2%)
Query: 257 RGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADFDKCDAERALATVELLCRIPAG 316
RG K ALF L + + + V A A + LV+ L D D ++A+A + L + G
Sbjct: 612 RGKKDAASALFNLSITHDNKARIVQAKAVKYLVE-LLDPDLEMVDKAVALLANLSAVGEG 670
Query: 317 CAEFAEHALTVPLLVKTILKISDRATEYAAGALAALCSASERCQRDAVSAGVLTQLLLLV 376
+PLLV+T+ S R E AA L LC S + + G + L+ L
Sbjct: 671 RQAIVREG-GIPLLVETVDLGSQRGKENAASVLLQLCLNSPKFCTLVLQEGAIPPLVALS 729
Query: 377 QSDCTDRAKRKAQLLLKLLRD 397
QS T RAK KAQ LL R+
Sbjct: 730 QSG-TQRAKEKAQQLLSHFRN 749
>sp|C6L7U1|LIN1_LOTJA Putative E3 ubiquitin-protein ligase LIN-1 OS=Lotus japonicus
GN=CERBERUS PE=2 SV=2
Length = 1485
Score = 89.7 bits (221), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
LE L + + P F CPI+ ++ CDPVT+ TGQTY+R +I+ W+ TGNTTCP+TR PL+
Sbjct: 502 LEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLS- 560
Query: 65 FTLIP--NHTLRRLIQDWCVAN 84
+++P N+ L+RLI W N
Sbjct: 561 ASILPKTNYVLKRLITSWKEQN 582
>sp|D1FP57|LIN2_LOTJA Putative E3 ubiquitin-protein ligase LIN-2 OS=Lotus japonicus
GN=LIN PE=1 SV=1
Length = 1485
Score = 89.4 bits (220), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 57/82 (69%), Gaps = 3/82 (3%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
LE L + + P F CPI+ ++ CDPVT+ TGQTY+R +I+ W+ TGNTTCP+TR PL+
Sbjct: 502 LEKLSMGSKPPKDFVCPITGQIFCDPVTLETGQTYERKAIQEWLRTGNTTCPITRQPLS- 560
Query: 65 FTLIP--NHTLRRLIQDWCVAN 84
+++P N+ L+RLI W N
Sbjct: 561 ASILPKTNYVLKRLITSWKEQN 582
>sp|Q9CAG5|PUB7_ARATH U-box domain-containing protein 7 OS=Arabidopsis thaliana GN=PUB7
PE=2 SV=1
Length = 782
Score = 89.0 bits (219), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P RCPISL+LMCDPV + +GQTY+R IE W + G+ TCP T+ L +L PN+ ++
Sbjct: 273 PEELRCPISLQLMCDPVIIASGQTYERVCIEKWFSDGHNTCPKTQQQLPHISLTPNNCVK 332
Query: 75 RLIQDWCVANRSFGVQRIPTPKQPAE 100
LI WC N G Q P P E
Sbjct: 333 GLIASWCEQN---GTQ---IPSGPPE 352
>sp|O22193|PUB4_ARATH U-box domain-containing protein 4 OS=Arabidopsis thaliana GN=PUB4
PE=1 SV=3
Length = 826
Score = 87.0 bits (214), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
SV I F CP+SLE+M DPV V +GQTY++ I+ W+ G CP TR LT TLIPN
Sbjct: 227 SVAILADFFCPLSLEVMTDPVIVSSGQTYEKAFIKRWIDLGLKVCPKTRQTLTHTTLIPN 286
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPKQ 97
+T++ LI +WC N ++P P +
Sbjct: 287 YTVKALIANWCETNDV----KLPDPNK 309
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 98/350 (28%), Positives = 157/350 (44%), Gaps = 24/350 (6%)
Query: 53 TTCPVTRSPLTDFTLIPNHTLRRL-IQDWCVANRSFGVQRIPTPKQPAEPSL--VRTLLN 109
TT TR L+DF+ P RR Q W + G + + P L V T +
Sbjct: 487 TTSAATRRDLSDFS--PKFMDRRTRGQFWRRPSERLGSRIVSAPSNETRRDLSEVETQVK 544
Query: 110 QASSE--SNTYGSRLSALRRLRGLARDSDKNRSLISSHNVRAILSQVFFTNINVKTASSP 167
+ E S++ ++ A LR LA+ + NR +I + +L ++ ++ T S+
Sbjct: 545 KLVEELKSSSLDTQRQATAELRLLAKHNMDNRIVIGNSGAIVLLVELLYS-----TDSAT 599
Query: 168 ELAHESLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMR 227
+ ++ L+ + + IA DA I L +L + S E + NSAA + L+ +
Sbjct: 600 Q--ENAVTALLNLSINDNNKKAIA-DAGAIEPLIHVLENGSSEAKENSAATL-FSLSVIE 655
Query: 228 SQELRAQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAET 287
+++ S ++D+L N PRG K ALF L + ++ + V +GA
Sbjct: 656 ENKIKIGQSG---AIGPLVDLLGN--GTPRGKKDAATALFNLSIHQENKAMIVQSGAVRY 710
Query: 288 LVDRLADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAG 347
L+D L D ++A+A + L IP G + +PLLV+ + S R E AA
Sbjct: 711 LID-LMDPAAGMVDKAVAVLANLATIPEGRNAIGQEG-GIPLLVEVVELGSARGKENAAA 768
Query: 348 ALAALCSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLRD 397
AL L + S R + G + L+ L QS T RA+ KAQ LL R+
Sbjct: 769 ALLQLSTNSGRFCNMVLQEGAVPPLVALSQS-GTPRAREKAQALLSYFRN 817
>sp|Q9XIJ5|PUB18_ARATH U-box domain-containing protein 18 OS=Arabidopsis thaliana GN=PUB18
PE=2 SV=1
Length = 697
Score = 86.7 bits (213), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 169/411 (41%), Gaps = 62/411 (15%)
Query: 20 CPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLIQD 79
CPISLE+M DPV + TG TYDR SI W +GN TCP+T LT L+ N ++R++I+
Sbjct: 294 CPISLEIMTDPVVIETGHTYDRSSITKWFGSGNITCPITGKILTSTELVDNVSVRQVIRK 353
Query: 80 WCVANRSF--GVQRIP------TPKQPAEPSLVRTLLNQASSESNTYGSRL--SALRRLR 129
C N G+ R P+ A + + +SE G + A+R +R
Sbjct: 354 HCKTNGIVLAGISRRRKSHDDVVPESLAAKGAGKLIAKFLTSELINGGEEMIYRAVREIR 413
Query: 130 GLARDSDKNRS-------------LISSHNVRAILSQV-FFTNINVKTASSPELAHESLA 175
+ S NRS L+SS ++R + + N++ ++A E L
Sbjct: 414 VQTKTSSFNRSCLVKAGAVTPLLKLLSSVDIRIQENAMAGILNLSKHVTGKSKIAGEGLK 473
Query: 176 LLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQI 235
+LV E A ++ S S+L + SS+E + + LI
Sbjct: 474 ILVEI------LNEGAKTETRLYSASALFYLSSVE---DYSRLIG--------------- 509
Query: 236 SNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRLADF 295
N D I G+++I+K + + A+ L + ++ +AAGA L+D L
Sbjct: 510 ENPDAI-PGLMNIVKGDDYGDSAKRSALLAVMGLLMQSDNHWRVLAAGAVPILLDLLRSG 568
Query: 296 DKCDAERA--LATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDR---ATEYAAGALA 350
+ A LAT+ L P G + L VK + D ++ G +
Sbjct: 569 EISGGLTADCLATLAKLAEYPDGTIGVIRRG-GLKLAVKILSSSEDSPVAVKQHCVGLIL 627
Query: 351 ALCSASERCQRDAVSAGVLTQL----LLLVQSDCTDRAKRKAQLLLKLLRD 397
LC RD V V L L V S+ +KA L++++ +
Sbjct: 628 NLCLNG---GRDVVGVLVKNSLVMGSLYTVLSNGEYGGSKKASALIRMIHE 675
>sp|Q9C7G1|PUB45_ARATH U-box domain-containing protein 45 OS=Arabidopsis thaliana GN=PUB45
PE=1 SV=1
Length = 768
Score = 85.9 bits (211), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ TCP T L+ L PN+ ++
Sbjct: 280 PEELRCPISLQLMYDPVIIASGQTYERICIEKWFSDGHNTCPKTHQQLSHLCLTPNYCVK 339
Query: 75 RLIQDWCVANRSFGVQRIPTPKQPAE 100
LI WC N GVQ P P E
Sbjct: 340 ALISSWCEQN---GVQ---VPDGPPE 359
Score = 32.7 bits (73), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 5/80 (6%)
Query: 322 EHALTVPLLVKTILKISDRA----TEYAAGALAALCSASERCQRDAVSAGVLTQLLLLVQ 377
+ ++ P LV + I D E A L LC+ SE C + GV+ L+ +
Sbjct: 626 DEMVSAPSLVSNLCTILDTGEPNEQEQAVSLLLILCNHSEICSEMVLQEGVIPS-LVSIS 684
Query: 378 SDCTDRAKRKAQLLLKLLRD 397
+ T R + +AQ LL L R+
Sbjct: 685 VNGTQRGRERAQKLLTLFRE 704
>sp|Q5XEZ8|PUB2_ARATH U-box domain-containing protein 2 OS=Arabidopsis thaliana GN=PUB2
PE=2 SV=1
Length = 707
Score = 84.3 bits (207), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 62/121 (51%), Gaps = 17/121 (14%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
V++P FRC +SLELM DPV V +GQT++R I+ W+ G CP TR L+ TL PN
Sbjct: 238 VRVPSDFRCSLSLELMTDPVIVASGQTFERVFIQKWIDMGLMVCPKTRQALSHTTLTPNF 297
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQPAE--------PSLVRTLLNQASSESNTYGSRLS 123
+R + WC N + P P E P LV ++ +ASS N + L
Sbjct: 298 IVRAFLASWCETNNVY-------PPDPLELIHSSEPFPLLVESV--RASSSENGHSESLD 348
Query: 124 A 124
A
Sbjct: 349 A 349
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 132/284 (46%), Gaps = 18/284 (6%)
Query: 114 ESNTYGSRLSALRRLRGLARDSDKNRSLISS-HNVRAILSQVFFTNINVKTASSPELAHE 172
+S++ ++ A R+R LAR+S NR +I+ + +++S ++ T+ ++ +
Sbjct: 431 KSSSLDTQREATARIRILARNSTDNRIVIARCEAIPSLVSLLYSTDERIQA--------D 482
Query: 173 SLALLVMFPLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELR 232
++ L+ + + IA + + L E + NSAA + L+ + +E +
Sbjct: 483 AVTCLLNLSINDNNKSLIAESGAIVPLIHVLKTGYLEEAKANSAATL-FSLSVI--EEYK 539
Query: 233 AQISNLDEIFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAGAAETLVDRL 292
+I I E ++D+L S G K ALF L + + + K + AGA LV+ L
Sbjct: 540 TEIGEAGAI-EPLVDLLG--SGSLSGKKDAATALFNLSIHHENKTKVIEAGAVRYLVE-L 595
Query: 293 ADFDKCDAERALATVELLCRIPAGCAEFAEHALTVPLLVKTILKISDRATEYAAGALAAL 352
D E+A+ + L + G E +P+LV+ + S R E A AL L
Sbjct: 596 MDPAFGMVEKAVVVLANLATVREGKIAIGEEG-GIPVLVEVVELGSARGKENATAALLQL 654
Query: 353 CSASERCQRDAVSAGVLTQLLLLVQSDCTDRAKRKAQLLLKLLR 396
C+ S + + + GV+ L+ L +S T R K KAQ LLK +
Sbjct: 655 CTHSPKFCNNVIREGVIPPLVALTKSG-TARGKEKAQNLLKYFK 697
>sp|O48700|PUB6_ARATH U-box domain-containing protein 6 OS=Arabidopsis thaliana GN=PUB6
PE=2 SV=2
Length = 771
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 45/70 (64%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P RCPISL+LM DPV + +GQTY+R IE W + G+ +CP T+ L +L PN+ ++
Sbjct: 276 PEELRCPISLQLMYDPVIIASGQTYERVCIEKWFSDGHNSCPKTQQQLPHLSLTPNYCVK 335
Query: 75 RLIQDWCVAN 84
LI WC N
Sbjct: 336 GLIASWCEQN 345
Score = 33.9 bits (76), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 42/92 (45%), Gaps = 5/92 (5%)
Query: 315 AGCAEFAEHALTVPLLVKTILKISDRA----TEYAAGALAALCSASERCQRDAVSAGVLT 370
A E E +T ++ T+ + D E A L LC+ SE C + + GV+
Sbjct: 621 ASSREGKEEMITTQGMISTLATVLDTGDTVEQEQAVSCLVILCTGSESCIQMVLQEGVIP 680
Query: 371 QLLLLVQSDCTDRAKRKAQLLLKLLRDSWPQD 402
L+ + + + R + K+Q LL L R+ +D
Sbjct: 681 S-LVSISVNGSPRGRDKSQKLLMLFREQRHRD 711
>sp|D1FP53|LIN_MEDTR Putative E3 ubiquitin-protein ligase LIN OS=Medicago truncatula
GN=LIN PE=2 SV=1
Length = 1488
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 54/82 (65%), Gaps = 3/82 (3%)
Query: 5 LEPLDLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTD 64
LE L + + P F CPI+ ++ DPVT+ TGQTY+R +I+ W+ TGNTTCP+TR L+
Sbjct: 504 LEKLTIGSKPPKDFVCPITGQIFSDPVTLETGQTYERKAIQEWLGTGNTTCPITRQALS- 562
Query: 65 FTLIP--NHTLRRLIQDWCVAN 84
++P N+ L+RLI W N
Sbjct: 563 ANILPKTNYVLKRLIVSWKEQN 584
>sp|Q3E9F7|PUB46_ARATH Putative U-box domain-containing protein 46 OS=Arabidopsis thaliana
GN=PUB46 PE=3 SV=1
Length = 458
Score = 79.3 bits (194), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 17/277 (6%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
V++P F C +S +M +PV + +GQTY++ I W+ TCP T+ L+ IPNH
Sbjct: 70 VEVPKEFICTLSNTIMIEPVIIASGQTYEKRYITEWLK-HERTCPKTKQVLSHRLWIPNH 128
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQPAE--PSLVRTLLNQASSESNTYGSRLSALRRLR 129
+ LI WC+ N+ + Q+ P+ + AE S + LL + SS S++ ++ A + LR
Sbjct: 129 LISDLITQWCLVNK-YDHQK-PSDELVAELFTSDIEALLQRVSS-SSSVADQIEAAKELR 185
Query: 130 GLARDSDKNRSLISS--HN-VRAILSQVFFTNINVKTASSPELAHESLALLVMFPLTETE 186
+ R + H+ + +LS + ++ SS EL + L + E+
Sbjct: 186 HQTKKFPNVRVFFVAGIHDSITRLLSP--LSTLDEAVDSSLELQENIVTALFNLSILESN 243
Query: 187 CMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDEIFEGVI 246
IA + I L+ L + E R N+AA L+ + + + I E + +I
Sbjct: 244 KTVIAENCLVIPLLTKSLKQGTDETRRNAAA----TLSSLSAIDSNKIIIGNSEAVKALI 299
Query: 247 DILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAG 283
D+++ K +F LC+V + + K V+AG
Sbjct: 300 DLIEEGDLL--ATKEATSTVFNLCIVLENKGKVVSAG 334
>sp|O23225|PUB5_ARATH U-box domain-containing protein 5 OS=Arabidopsis thaliana GN=PUB5
PE=2 SV=3
Length = 718
Score = 77.8 bits (190), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
+P F+C +S +M DPV + +G T++R I+ W GN +CP+++ L DFTL PN L
Sbjct: 219 LPEKFKCTLSRTVMYDPVIISSGNTFERMQIQKWFDEGNDSCPISKRKLDDFTLKPNVEL 278
Query: 74 RRLIQDWCVAN 84
+ I +WC N
Sbjct: 279 KSQISEWCAKN 289
>sp|O80742|PUB19_ARATH U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19
PE=2 SV=1
Length = 686
Score = 77.0 bits (188), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 18 FRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLI 77
RCPISLE+M DPV + +G TYDR SI W A+GN TCP T L L+ N +++++I
Sbjct: 282 LRCPISLEIMSDPVVLESGHTYDRSSITKWFASGNITCPKTGKTLVSTVLVDNFSVKQVI 341
Query: 78 QDWCVAN 84
Q + N
Sbjct: 342 QSYSKQN 348
>sp|Q9LQ92|PUB54_ARATH U-box domain-containing protein 54 OS=Arabidopsis thaliana GN=PUB54
PE=2 SV=1
Length = 308
Score = 76.6 bits (187), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 42/70 (60%)
Query: 18 FRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLRRLI 77
F+CPIS+E+M DP G TY+ W+ +G T P T PL + L+PNHTLR +I
Sbjct: 237 FKCPISMEIMRDPHVAADGFTYEAEEFRKWLRSGGRTSPKTNKPLENHNLVPNHTLRIII 296
Query: 78 QDWCVANRSF 87
+DW N ++
Sbjct: 297 KDWLEKNPNY 306
>sp|Q3E9F5|PUB48_ARATH U-box domain-containing protein 48 OS=Arabidopsis thaliana GN=PUB48
PE=2 SV=1
Length = 456
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 66/126 (52%), Gaps = 14/126 (11%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
SV++P F+C +S +M DPV + +GQTY++ I W+ + TCP + L L PN
Sbjct: 71 SVEVPKEFKCTLSKTIMIDPVIIFSGQTYEKRYITEWL-NHDLTCPTAKQVLYRVCLTPN 129
Query: 71 HTLRRLIQDWCVANRSFGVQRIPTPKQPAEPSLV--------RTLLNQASSESNTYGSRL 122
H + LI WC+AN+ R P PK P++ V +LL + SS S++ +
Sbjct: 130 HLINELITRWCLANK---YDR-PAPK-PSDIDYVTELFTDGIESLLQRISSPSSSVADQT 184
Query: 123 SALRRL 128
A + L
Sbjct: 185 EAAKEL 190
>sp|Q683D5|PUB37_ARATH U-box domain-containing protein 37 OS=Arabidopsis thaliana GN=PUB37
PE=2 SV=1
Length = 400
Score = 73.6 bits (179), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 46/79 (58%)
Query: 9 DLSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLI 68
D + P +F CPISLE+M DP G TY+ +I +W+ G+ T P+T + L L+
Sbjct: 320 DEHREAPQYFICPISLEVMKDPQLAADGFTYEAEAISTWLQGGHETSPMTNTKLHHTKLV 379
Query: 69 PNHTLRRLIQDWCVANRSF 87
PN LR IQ+W A+ SF
Sbjct: 380 PNLALRSAIQEWLHASSSF 398
>sp|Q3E9F6|PUB47_ARATH Putative U-box domain-containing protein 47 OS=Arabidopsis thaliana
GN=PUB47 PE=3 SV=1
Length = 445
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 127/283 (44%), Gaps = 33/283 (11%)
Query: 12 VQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNH 71
V++P F C +S ++M +P+ + +GQT+++ I W+ TCP T+ L +IPNH
Sbjct: 63 VEVPKEFICTLSNKIMIEPMLIASGQTFEKSYILEWLK-HERTCPRTKQVLYHRFMIPNH 121
Query: 72 TLRRLIQDWCVANRSFGVQRIPTPKQPAE---------PSLVRTLLNQASSESNTYGSRL 122
+ +I++WC+ + PK E SL++ + + +S E T ++
Sbjct: 122 LINEVIKEWCL------IHNFDRPKTSDEVIDLFTGDLESLLQRISSPSSVEDQTEAAKE 175
Query: 123 SALRRLRGLARDSDKNRSLISSHNVRAILSQV--FFTNINVKTASSPELAHESLALLVMF 180
AL+ K S + + V I + T +++ S+PE + L +F
Sbjct: 176 LALKA---------KRFSSVCVYFVAKIPDSITRLLTPLSISEDSNPEFLENIVTALHIF 226
Query: 181 PLTETECMEIASDADKITSLSSLLFHSSIEVRVNSAALIEIVLAGMRSQELRAQISNLDE 240
+E +A + + L+ + ++ R++SAA + L+ S ++ I E
Sbjct: 227 STSEKNKTLVAENPLVLPLLAKYMKQGTVLTRIHSAATVN-SLSYTDSNKI---IIGNSE 282
Query: 241 IFEGVIDILKNLSSYPRGLKVGIKALFALCLVKQTRYKAVAAG 283
+ + +I +++ S AL LC VK+ KAV+ G
Sbjct: 283 VLKALIHVIEEGDSL--ATSEAFSALSNLCPVKEISEKAVSEG 323
>sp|Q94A51|PUB32_ARATH U-box domain-containing protein 32 OS=Arabidopsis thaliana GN=PUB32
PE=2 SV=1
Length = 805
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P H+ CPI E+M DP+ G TY+ +I W+A G+ T P+T + D LIPNH L
Sbjct: 736 PSHYLCPIFQEVMKDPLIAADGFTYEAEAIREWLANGHDTSPMTNLKMEDCNLIPNHALH 795
Query: 75 RLIQDW 80
IQDW
Sbjct: 796 LAIQDW 801
>sp|P0C6E7|PUB55_ARATH Putative U-box domain-containing protein 55 OS=Arabidopsis thaliana
GN=PUB55 PE=3 SV=1
Length = 568
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 40/72 (55%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
Q P +F CPIS E+M +P G TY+ S+ W+ G+ T P+T L L+PNH
Sbjct: 496 QPPSYFICPISQEVMREPRVAADGFTYEAESLREWLDNGHETSPMTNLKLAHNNLVPNHA 555
Query: 73 LRRLIQDWCVAN 84
LR IQ+W N
Sbjct: 556 LRSAIQEWLQRN 567
>sp|Q9LU47|PUB53_ARATH Putative U-box domain-containing protein 53 OS=Arabidopsis thaliana
GN=PUB53 PE=3 SV=1
Length = 819
Score = 70.1 bits (170), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 13 QIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHT 72
Q P HF CP+ ++M +P G TYDR +IE W+ + T PVT SPL + L+PNHT
Sbjct: 748 QPPSHFFCPLLKDVMKEPCIAADGYTYDRRAIEEWME-NHRTSPVTNSPLQNVNLLPNHT 806
Query: 73 LRRLIQDWCVANR 85
L I +W N+
Sbjct: 807 LYAAIVEWRNRNQ 819
>sp|Q9SW11|PUB35_ARATH U-box domain-containing protein 35 OS=Arabidopsis thaliana GN=PUB35
PE=1 SV=2
Length = 835
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 10 LSVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIP 69
+S Q P HF CP+ ++M +P G TYDR +IE W+ NT+ P+T SPL L+P
Sbjct: 762 VSTQPPTHFICPLLKDVMNEPCVAADGYTYDRHAIEEWLKEHNTS-PMTDSPLHSKNLLP 820
Query: 70 NHTLRRLIQDW 80
N+TL I +W
Sbjct: 821 NYTLYTAIMEW 831
>sp|Q8S8S7|PUB34_ARATH U-box domain-containing protein 34 OS=Arabidopsis thaliana GN=PUB34
PE=3 SV=1
Length = 801
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 11 SVQIPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPN 70
+++ P H+ CPI E+M +P G TY+R +I +W+ N + PVTR L F L PN
Sbjct: 722 NLRAPSHYFCPILREIMEEPEIAADGFTYERKAILAWLEKHNIS-PVTRQKLDHFKLTPN 780
Query: 71 HTLRRLIQDW 80
HTLR I+DW
Sbjct: 781 HTLRSAIRDW 790
>sp|Q9FGD7|PUB50_ARATH Putative U-box domain-containing protein 50 OS=Arabidopsis thaliana
GN=PUB50 PE=3 SV=1
Length = 765
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 40/67 (59%)
Query: 14 IPYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTL 73
IP F CPI E+M +P G +Y+ +I+ W++ G+ T P+T L L PNHTL
Sbjct: 689 IPSVFMCPILQEVMKNPHVAADGFSYELEAIQEWLSMGHDTSPMTNLRLDYQMLTPNHTL 748
Query: 74 RRLIQDW 80
R LIQDW
Sbjct: 749 RSLIQDW 755
>sp|A0AUS0|WSDU1_DANRE WD repeat, SAM and U-box domain-containing protein 1 OS=Danio rerio
GN=wdsub1 PE=2 SV=1
Length = 487
Score = 65.9 bits (159), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 40/66 (60%)
Query: 15 PYHFRCPISLELMCDPVTVCTGQTYDRPSIESWVATGNTTCPVTRSPLTDFTLIPNHTLR 74
P F CPI+ E+M DPV G +Y+R +IE+W++T N T P+T PL L PN TL+
Sbjct: 418 PDEFLCPITREIMKDPVIAADGYSYEREAIEAWISTKNRTSPMTNLPLQTTLLTPNRTLK 477
Query: 75 RLIQDW 80
I W
Sbjct: 478 MAIFRW 483
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.133 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 136,203,503
Number of Sequences: 539616
Number of extensions: 5039462
Number of successful extensions: 12873
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 70
Number of HSP's that attempted gapping in prelim test: 12630
Number of HSP's gapped (non-prelim): 182
length of query: 418
length of database: 191,569,459
effective HSP length: 120
effective length of query: 298
effective length of database: 126,815,539
effective search space: 37791030622
effective search space used: 37791030622
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)