Query 014821
Match_columns 418
No_of_seqs 168 out of 1954
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 18:25:39 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014821.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014821hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3uox_A Otemo; baeyer-villiger 100.0 1.3E-40 4.5E-45 338.9 25.0 369 2-416 8-433 (545)
2 3gwf_A Cyclohexanone monooxyge 100.0 2.6E-40 8.9E-45 336.3 25.2 362 3-416 8-426 (540)
3 4ap3_A Steroid monooxygenase; 100.0 3.5E-40 1.2E-44 336.0 24.2 363 3-416 21-438 (549)
4 1w4x_A Phenylacetone monooxyge 100.0 8.8E-37 3E-41 311.6 28.2 363 3-416 16-433 (542)
5 2xve_A Flavin-containing monoo 100.0 5.5E-35 1.9E-39 292.7 29.0 284 1-416 1-312 (464)
6 4a9w_A Monooxygenase; baeyer-v 100.0 4.4E-35 1.5E-39 282.8 24.7 316 1-416 1-319 (357)
7 4b63_A L-ornithine N5 monooxyg 100.0 2.1E-33 7E-38 283.7 20.8 369 3-418 39-455 (501)
8 2gv8_A Monooxygenase; FMO, FAD 100.0 1E-32 3.4E-37 275.4 25.5 280 2-416 5-333 (447)
9 3d1c_A Flavin-containing putat 100.0 7.1E-29 2.4E-33 241.0 24.6 285 1-416 2-305 (369)
10 3lzw_A Ferredoxin--NADP reduct 100.0 7.1E-30 2.4E-34 244.1 16.3 266 3-416 7-282 (332)
11 2zbw_A Thioredoxin reductase; 100.0 1E-29 3.5E-34 243.7 17.4 271 2-416 4-284 (335)
12 3ab1_A Ferredoxin--NADP reduct 100.0 6.1E-29 2.1E-33 240.9 20.1 273 1-416 12-295 (360)
13 3fbs_A Oxidoreductase; structu 100.0 3E-28 1E-32 229.1 18.0 259 3-416 2-262 (297)
14 3f8d_A Thioredoxin reductase ( 100.0 7.3E-28 2.5E-32 229.0 19.8 259 3-416 15-284 (323)
15 2q7v_A Thioredoxin reductase; 100.0 1.8E-27 6.3E-32 227.1 20.7 262 3-416 8-281 (325)
16 2q0l_A TRXR, thioredoxin reduc 99.9 3E-27 1E-31 224.2 17.8 265 4-416 2-278 (311)
17 3r9u_A Thioredoxin reductase; 99.9 5.3E-27 1.8E-31 222.4 18.1 268 2-416 3-281 (315)
18 3itj_A Thioredoxin reductase 1 99.9 2.3E-27 7.8E-32 227.2 15.4 266 3-416 22-304 (338)
19 3s5w_A L-ornithine 5-monooxyge 99.9 6.2E-27 2.1E-31 234.5 18.9 209 3-245 30-267 (463)
20 1trb_A Thioredoxin reductase; 99.9 3.4E-27 1.1E-31 224.6 14.3 265 1-416 3-283 (320)
21 1fl2_A Alkyl hydroperoxide red 99.9 1.3E-26 4.4E-31 219.6 17.8 263 3-416 1-274 (310)
22 4fk1_A Putative thioredoxin re 99.9 1E-26 3.5E-31 220.1 16.6 260 1-416 4-269 (304)
23 2a87_A TRXR, TR, thioredoxin r 99.9 8.7E-27 3E-31 223.5 16.2 261 2-416 13-285 (335)
24 1vdc_A NTR, NADPH dependent th 99.9 1.8E-26 6.1E-31 220.9 17.1 263 3-416 8-292 (333)
25 3cty_A Thioredoxin reductase; 99.9 2.8E-26 9.7E-31 218.3 18.0 260 3-416 16-285 (319)
26 3iwa_A FAD-dependent pyridine 99.9 2.8E-26 9.4E-31 230.4 14.8 278 1-416 1-291 (472)
27 1hyu_A AHPF, alkyl hydroperoxi 99.9 4.1E-25 1.4E-29 224.1 22.4 264 2-416 211-485 (521)
28 4gcm_A TRXR, thioredoxin reduc 99.9 1.3E-25 4.6E-30 213.0 15.4 176 1-240 2-179 (312)
29 4a5l_A Thioredoxin reductase; 99.9 9.3E-26 3.2E-30 214.0 13.6 185 1-240 1-186 (314)
30 3ics_A Coenzyme A-disulfide re 99.9 9.5E-26 3.3E-30 232.5 14.6 276 1-416 34-315 (588)
31 3lxd_A FAD-dependent pyridine 99.9 1.9E-25 6.6E-30 220.6 15.5 263 3-416 9-282 (415)
32 4eqs_A Coenzyme A disulfide re 99.9 7.8E-26 2.7E-30 224.6 12.6 268 5-416 2-273 (437)
33 3kd9_A Coenzyme A disulfide re 99.9 2.5E-25 8.4E-30 222.0 15.6 268 1-416 1-277 (449)
34 3oc4_A Oxidoreductase, pyridin 99.9 7.2E-25 2.5E-29 218.8 18.1 269 1-416 1-276 (452)
35 3fg2_P Putative rubredoxin red 99.9 2.3E-25 7.8E-30 219.3 12.5 264 3-416 1-272 (404)
36 3ntd_A FAD-dependent pyridine 99.9 3.2E-25 1.1E-29 227.6 14.0 270 4-416 2-300 (565)
37 2hqm_A GR, grase, glutathione 99.9 1.3E-25 4.6E-30 225.7 10.3 278 2-416 10-319 (479)
38 3ef6_A Toluene 1,2-dioxygenase 99.9 8.7E-26 3E-30 222.6 8.7 265 1-416 1-272 (410)
39 3l8k_A Dihydrolipoyl dehydroge 99.9 6.5E-26 2.2E-30 227.2 7.3 277 1-416 1-305 (466)
40 2gqw_A Ferredoxin reductase; f 99.9 1E-24 3.5E-29 214.8 15.4 259 3-416 7-270 (408)
41 2bc0_A NADH oxidase; flavoprot 99.9 6.2E-25 2.1E-29 221.4 13.4 270 3-416 35-323 (490)
42 1mo9_A ORF3; nucleotide bindin 99.9 7.4E-25 2.5E-29 222.5 13.7 278 2-416 42-350 (523)
43 1zmd_A Dihydrolipoyl dehydroge 99.9 2.7E-25 9.2E-30 223.3 10.2 281 2-416 5-317 (474)
44 3urh_A Dihydrolipoyl dehydroge 99.9 4.2E-25 1.4E-29 222.8 11.4 282 1-416 23-335 (491)
45 3klj_A NAD(FAD)-dependent dehy 99.9 9.9E-26 3.4E-30 220.0 6.5 253 3-416 9-262 (385)
46 2wpf_A Trypanothione reductase 99.9 4.9E-25 1.7E-29 222.3 11.6 281 1-416 4-327 (495)
47 1ojt_A Surface protein; redox- 99.9 1.4E-24 4.8E-29 218.4 13.8 281 3-416 6-321 (482)
48 2a8x_A Dihydrolipoyl dehydroge 99.9 3.7E-25 1.3E-29 221.7 8.7 279 1-416 1-306 (464)
49 1xhc_A NADH oxidase /nitrite r 99.9 3.3E-25 1.1E-29 215.2 7.9 256 4-416 9-265 (367)
50 3dk9_A Grase, GR, glutathione 99.9 1.1E-24 3.7E-29 219.1 11.6 275 2-416 19-328 (478)
51 2r9z_A Glutathione amide reduc 99.9 1E-24 3.4E-29 218.3 10.9 274 1-416 1-299 (463)
52 1xdi_A RV3303C-LPDA; reductase 99.9 1.6E-24 5.5E-29 218.9 12.4 287 3-416 2-314 (499)
53 1q1r_A Putidaredoxin reductase 99.9 1.3E-24 4.5E-29 215.5 11.4 265 2-416 3-281 (431)
54 2cdu_A NADPH oxidase; flavoenz 99.9 5E-24 1.7E-28 212.7 15.6 271 4-416 1-279 (452)
55 2v3a_A Rubredoxin reductase; a 99.9 2.3E-24 7.7E-29 210.7 12.5 264 2-416 3-274 (384)
56 1zk7_A HGII, reductase, mercur 99.9 4.3E-24 1.5E-28 214.1 14.2 280 2-416 3-306 (467)
57 2qae_A Lipoamide, dihydrolipoy 99.9 1.9E-24 6.3E-29 216.8 11.3 281 3-416 2-311 (468)
58 1dxl_A Dihydrolipoamide dehydr 99.9 1.5E-24 5.1E-29 217.7 9.9 281 2-416 5-314 (470)
59 1ges_A Glutathione reductase; 99.9 5.8E-25 2E-29 219.3 6.3 273 2-416 3-300 (450)
60 2eq6_A Pyruvate dehydrogenase 99.9 2E-24 6.7E-29 216.3 10.1 274 1-416 4-306 (464)
61 1nhp_A NADH peroxidase; oxidor 99.9 1.3E-23 4.4E-28 209.5 15.8 268 4-416 1-278 (447)
62 1ebd_A E3BD, dihydrolipoamide 99.9 5.2E-24 1.8E-28 212.8 12.7 277 3-416 3-305 (455)
63 3h8l_A NADH oxidase; membrane 99.9 7.6E-24 2.6E-28 208.7 13.3 265 4-416 2-304 (409)
64 1fec_A Trypanothione reductase 99.9 3.4E-24 1.2E-28 215.9 11.0 281 1-416 1-323 (490)
65 3ic9_A Dihydrolipoamide dehydr 99.9 2.4E-25 8.3E-30 224.4 2.6 276 3-416 8-310 (492)
66 1v59_A Dihydrolipoamide dehydr 99.9 2.5E-24 8.6E-29 216.4 9.2 281 3-416 5-322 (478)
67 3dgh_A TRXR-1, thioredoxin red 99.9 5.9E-24 2E-28 214.0 11.4 279 2-416 8-323 (483)
68 1onf_A GR, grase, glutathione 99.9 7.4E-24 2.5E-28 214.0 11.9 277 3-416 2-309 (500)
69 3cgb_A Pyridine nucleotide-dis 99.9 1.5E-23 5.1E-28 210.8 14.0 271 3-416 36-315 (480)
70 2yqu_A 2-oxoglutarate dehydrog 99.9 2.3E-24 7.9E-29 215.4 7.8 277 3-416 1-299 (455)
71 3o0h_A Glutathione reductase; 99.9 9.3E-24 3.2E-28 212.6 12.2 273 3-416 26-323 (484)
72 1lvl_A Dihydrolipoamide dehydr 99.9 5.7E-24 1.9E-28 212.6 10.6 272 2-416 4-302 (458)
73 3dgz_A Thioredoxin reductase 2 99.9 6.3E-24 2.2E-28 214.0 10.7 280 3-416 6-323 (488)
74 3qfa_A Thioredoxin reductase 1 99.9 7.2E-24 2.5E-28 215.0 11.1 280 3-416 32-351 (519)
75 3lad_A Dihydrolipoamide dehydr 99.9 1.1E-23 3.7E-28 211.7 12.2 281 2-416 2-315 (476)
76 4dna_A Probable glutathione re 99.9 9.9E-24 3.4E-28 211.2 11.0 272 3-416 5-303 (463)
77 2x8g_A Thioredoxin glutathione 99.9 5.9E-23 2E-27 212.0 11.7 188 2-238 106-318 (598)
78 4g6h_A Rotenone-insensitive NA 99.9 2.2E-23 7.5E-28 210.1 7.1 273 2-416 41-369 (502)
79 2vdc_G Glutamate synthase [NAD 99.9 6.2E-23 2.1E-27 204.2 9.7 171 3-244 122-303 (456)
80 3sx6_A Sulfide-quinone reducta 99.9 3.9E-23 1.3E-27 205.3 5.8 273 1-416 1-302 (437)
81 1lqt_A FPRA; NADP+ derivative, 99.9 2.1E-22 7.1E-27 200.7 9.7 171 1-240 1-202 (456)
82 4b1b_A TRXR, thioredoxin reduc 99.9 2E-22 7E-27 203.9 8.6 280 4-416 43-355 (542)
83 1m6i_A Programmed cell death p 99.9 2.2E-22 7.6E-27 202.8 7.9 283 1-416 9-315 (493)
84 3k30_A Histamine dehydrogenase 99.8 4.9E-22 1.7E-26 208.1 7.1 226 3-384 391-632 (690)
85 1ps9_A 2,4-dienoyl-COA reducta 99.8 2.4E-21 8.2E-26 202.4 10.5 144 3-228 373-519 (671)
86 1o94_A Tmadh, trimethylamine d 99.8 2.3E-21 7.8E-26 204.0 7.9 166 3-239 389-563 (729)
87 1cjc_A Protein (adrenodoxin re 99.8 2.6E-20 8.9E-25 185.7 13.5 169 3-241 6-201 (460)
88 2gag_A Heterotetrameric sarcos 99.8 5.3E-20 1.8E-24 198.7 15.2 189 3-240 128-318 (965)
89 3h28_A Sulfide-quinone reducta 99.8 3.5E-21 1.2E-25 190.9 2.3 263 3-416 2-291 (430)
90 3hyw_A Sulfide-quinone reducta 99.8 2.4E-20 8.2E-25 184.8 0.4 76 332-416 208-291 (430)
91 3vrd_B FCCB subunit, flavocyto 99.8 1.3E-18 4.4E-23 170.7 12.7 267 3-416 2-291 (401)
92 1gte_A Dihydropyrimidine dehyd 99.8 6.1E-19 2.1E-23 191.7 10.5 174 3-244 187-371 (1025)
93 1y56_A Hypothetical protein PH 99.7 1.3E-18 4.4E-23 175.2 8.4 157 3-217 108-264 (493)
94 2gqf_A Hypothetical protein HI 99.4 3.7E-13 1.3E-17 131.6 6.6 136 1-162 2-168 (401)
95 3oz2_A Digeranylgeranylglycero 99.3 5.5E-12 1.9E-16 122.4 11.5 137 1-162 2-162 (397)
96 3cgv_A Geranylgeranyl reductas 99.3 1.7E-11 5.8E-16 119.4 11.6 136 1-162 2-162 (397)
97 3v76_A Flavoprotein; structura 99.2 4E-11 1.4E-15 117.7 12.5 134 2-166 26-190 (417)
98 2ywl_A Thioredoxin reductase r 99.2 9.8E-11 3.4E-15 101.1 13.2 108 4-161 2-109 (180)
99 2cul_A Glucose-inhibited divis 99.2 6.7E-11 2.3E-15 106.7 12.5 123 1-162 1-125 (232)
100 3qj4_A Renalase; FAD/NAD(P)-bi 99.2 5.2E-11 1.8E-15 113.8 10.2 129 4-161 2-164 (342)
101 3nix_A Flavoprotein/dehydrogen 99.2 1.6E-10 5.4E-15 113.6 13.8 135 3-162 5-166 (421)
102 3ihg_A RDME; flavoenzyme, anth 99.1 6E-10 2.1E-14 113.1 15.0 138 3-162 5-183 (535)
103 1yvv_A Amine oxidase, flavin-c 99.1 6.8E-10 2.3E-14 105.4 14.1 130 3-162 2-162 (336)
104 3rp8_A Flavoprotein monooxygen 99.1 1.7E-10 5.8E-15 112.9 9.7 131 2-163 22-182 (407)
105 1rp0_A ARA6, thiazole biosynth 99.1 1E-09 3.5E-14 102.1 14.3 137 2-162 38-191 (284)
106 3i3l_A Alkylhalidase CMLS; fla 99.1 7.7E-10 2.6E-14 113.2 14.4 137 1-162 21-188 (591)
107 3c96_A Flavin-containing monoo 99.1 4.5E-10 1.5E-14 110.1 11.9 137 1-162 2-169 (410)
108 3alj_A 2-methyl-3-hydroxypyrid 99.1 2.5E-10 8.4E-15 110.7 9.9 129 1-162 9-160 (379)
109 3nlc_A Uncharacterized protein 99.1 4.1E-10 1.4E-14 113.8 11.5 132 3-162 107-277 (549)
110 2xdo_A TETX2 protein; tetracyc 99.1 6.8E-10 2.3E-14 108.3 12.6 131 1-163 24-183 (398)
111 2x3n_A Probable FAD-dependent 99.1 3.4E-10 1.2E-14 110.5 10.0 131 3-162 6-166 (399)
112 3fmw_A Oxygenase; mithramycin, 99.1 1.2E-09 4E-14 111.6 13.9 132 3-162 49-207 (570)
113 3ces_A MNMG, tRNA uridine 5-ca 99.1 7.3E-10 2.5E-14 113.1 11.9 169 3-237 28-221 (651)
114 2qa1_A PGAE, polyketide oxygen 99.1 1.2E-09 4E-14 109.9 13.4 135 2-162 10-165 (500)
115 2r0c_A REBC; flavin adenine di 99.0 1.8E-09 6.3E-14 109.8 14.6 132 3-162 26-196 (549)
116 2bry_A NEDD9 interacting prote 99.0 2.9E-10 9.9E-15 114.3 8.5 136 3-162 92-230 (497)
117 3e1t_A Halogenase; flavoprotei 99.0 1.4E-09 4.8E-14 109.8 13.5 136 3-162 7-172 (512)
118 2vou_A 2,6-dihydroxypyridine h 99.0 1.5E-09 5.1E-14 105.9 12.7 131 1-162 3-153 (397)
119 2qa2_A CABE, polyketide oxygen 99.0 1.7E-09 5.8E-14 108.7 13.1 134 3-162 12-166 (499)
120 3atr_A Conserved archaeal prot 99.0 5.8E-10 2E-14 110.8 9.4 138 3-164 6-164 (453)
121 3fpz_A Thiazole biosynthetic e 99.0 1.2E-11 4.1E-16 117.5 -2.8 151 3-240 65-217 (326)
122 3dme_A Conserved exported prot 99.0 1.6E-09 5.3E-14 104.1 11.5 62 75-162 148-209 (369)
123 2i0z_A NAD(FAD)-utilizing dehy 99.0 6.2E-10 2.1E-14 110.4 8.9 132 3-162 26-191 (447)
124 3dje_A Fructosyl amine: oxygen 99.0 3.9E-09 1.3E-13 104.3 13.6 58 76-162 160-221 (438)
125 2qcu_A Aerobic glycerol-3-phos 99.0 5.2E-09 1.8E-13 105.3 14.7 138 1-162 1-210 (501)
126 1y0p_A Fumarate reductase flav 99.0 5.7E-09 1.9E-13 106.7 14.7 137 3-162 126-317 (571)
127 1k0i_A P-hydroxybenzoate hydro 99.0 1E-09 3.6E-14 106.8 8.7 135 3-163 2-164 (394)
128 2gmh_A Electron transfer flavo 99.0 7E-09 2.4E-13 106.2 14.8 136 4-162 36-217 (584)
129 3da1_A Glycerol-3-phosphate de 98.9 5.6E-09 1.9E-13 106.4 13.7 64 76-162 169-232 (561)
130 3nyc_A D-arginine dehydrogenas 98.9 2.1E-09 7.1E-14 103.8 9.1 58 75-162 152-209 (381)
131 1qo8_A Flavocytochrome C3 fuma 98.9 8.7E-09 3E-13 105.2 14.2 137 3-162 121-312 (566)
132 2zxi_A TRNA uridine 5-carboxym 98.9 1.1E-09 3.6E-14 111.5 7.2 169 3-237 27-220 (637)
133 1y56_B Sarcosine oxidase; dehy 98.9 8.3E-09 2.8E-13 99.8 13.2 36 3-39 5-40 (382)
134 2uzz_A N-methyl-L-tryptophan o 98.9 6.6E-09 2.3E-13 100.1 12.3 36 3-38 2-37 (372)
135 1ryi_A Glycine oxidase; flavop 98.9 5.1E-09 1.8E-13 101.2 11.4 36 3-38 17-52 (382)
136 3ps9_A TRNA 5-methylaminomethy 98.9 8.9E-09 3E-13 107.4 13.6 130 4-162 273-473 (676)
137 3pvc_A TRNA 5-methylaminomethy 98.9 1.9E-08 6.3E-13 105.2 14.4 58 76-162 411-469 (689)
138 2e5v_A L-aspartate oxidase; ar 98.9 2E-09 6.8E-14 107.4 6.5 35 5-40 1-35 (472)
139 2oln_A NIKD protein; flavoprot 98.9 1.8E-08 6.3E-13 98.0 13.1 38 1-38 1-39 (397)
140 2gag_B Heterotetrameric sarcos 98.9 1.4E-08 4.6E-13 99.0 12.0 36 3-39 21-58 (405)
141 4hb9_A Similarities with proba 98.8 6.5E-09 2.2E-13 101.3 9.4 35 4-38 2-36 (412)
142 2gf3_A MSOX, monomeric sarcosi 98.8 1.2E-08 4.2E-13 98.8 11.0 38 2-39 2-39 (389)
143 4at0_A 3-ketosteroid-delta4-5a 98.8 5.5E-08 1.9E-12 98.0 15.1 39 3-41 41-79 (510)
144 2ywl_A Thioredoxin reductase r 98.8 5.9E-09 2E-13 89.8 6.4 73 332-416 64-140 (180)
145 3jsk_A Cypbp37 protein; octame 98.8 9.2E-09 3.2E-13 97.3 8.2 105 3-109 79-191 (344)
146 2dkh_A 3-hydroxybenzoate hydro 98.8 4E-08 1.4E-12 101.7 13.4 142 3-162 32-211 (639)
147 1d4d_A Flavocytochrome C fumar 98.8 1E-07 3.5E-12 97.3 15.4 137 3-162 126-317 (572)
148 1pn0_A Phenol 2-monooxygenase; 98.7 7.3E-08 2.5E-12 100.1 13.8 105 3-109 8-152 (665)
149 3k7m_X 6-hydroxy-L-nicotine ox 98.7 7.5E-08 2.6E-12 94.7 13.2 40 4-43 2-41 (431)
150 3cp8_A TRNA uridine 5-carboxym 98.7 4.2E-08 1.4E-12 100.1 10.5 128 2-161 20-173 (641)
151 2wdq_A Succinate dehydrogenase 98.7 1.6E-07 5.4E-12 96.2 14.5 36 3-38 7-42 (588)
152 3kkj_A Amine oxidase, flavin-c 98.7 1.4E-08 4.6E-13 92.4 5.7 43 1-44 1-43 (336)
153 2aqj_A Tryptophan halogenase, 98.7 7.1E-08 2.4E-12 97.8 11.5 35 2-36 4-41 (538)
154 2h88_A Succinate dehydrogenase 98.7 1.2E-07 4E-12 97.4 13.2 36 3-38 18-53 (621)
155 2rgh_A Alpha-glycerophosphate 98.7 1.6E-07 5.5E-12 95.8 13.7 36 3-38 32-67 (571)
156 3nrn_A Uncharacterized protein 98.7 3.7E-08 1.3E-12 96.6 8.6 41 4-44 1-41 (421)
157 3i6d_A Protoporphyrinogen oxid 98.7 3.5E-08 1.2E-12 98.0 8.4 39 3-41 5-49 (470)
158 1pj5_A N,N-dimethylglycine oxi 98.6 1.3E-07 4.6E-12 100.8 12.6 36 2-37 3-39 (830)
159 1kf6_A Fumarate reductase flav 98.6 2.3E-07 7.9E-12 95.1 13.9 36 3-38 5-42 (602)
160 3c4n_A Uncharacterized protein 98.6 3.6E-08 1.2E-12 96.3 7.2 35 3-37 36-72 (405)
161 2bs2_A Quinol-fumarate reducta 98.6 3.1E-07 1E-11 95.0 14.5 36 3-38 5-40 (660)
162 3axb_A Putative oxidoreductase 98.6 1E-07 3.6E-12 94.2 9.7 38 1-38 21-59 (448)
163 1chu_A Protein (L-aspartate ox 98.6 1.4E-07 4.8E-12 95.6 10.8 37 3-40 8-44 (540)
164 2e4g_A Tryptophan halogenase; 98.6 2E-07 7E-12 94.7 12.1 61 74-162 191-252 (550)
165 2gjc_A Thiazole biosynthetic e 98.6 3.6E-07 1.2E-11 85.8 12.6 104 4-109 66-177 (326)
166 3ka7_A Oxidoreductase; structu 98.6 3.5E-07 1.2E-11 89.6 12.9 40 4-43 1-40 (425)
167 2pyx_A Tryptophan halogenase; 98.6 3.9E-07 1.3E-11 92.1 13.1 61 75-164 173-235 (526)
168 2eq6_A Pyruvate dehydrogenase 98.6 4.4E-07 1.5E-11 90.2 13.3 101 4-161 170-270 (464)
169 1v59_A Dihydrolipoamide dehydr 98.6 4.4E-07 1.5E-11 90.6 13.1 102 3-161 183-286 (478)
170 2yqu_A 2-oxoglutarate dehydrog 98.6 2.8E-07 9.5E-12 91.5 11.5 96 4-161 168-263 (455)
171 3s5w_A L-ornithine 5-monooxyge 98.5 5.3E-07 1.8E-11 89.5 12.7 134 3-161 227-376 (463)
172 2v3a_A Rubredoxin reductase; a 98.5 5.6E-07 1.9E-11 87.2 12.6 98 3-161 145-242 (384)
173 3c4a_A Probable tryptophan hyd 98.5 2.7E-08 9.2E-13 96.4 3.0 101 4-106 1-125 (381)
174 2ivd_A PPO, PPOX, protoporphyr 98.5 3.5E-07 1.2E-11 91.1 10.5 40 3-42 16-55 (478)
175 2weu_A Tryptophan 5-halogenase 98.5 3.8E-07 1.3E-11 91.8 10.7 62 74-163 170-231 (511)
176 3urh_A Dihydrolipoyl dehydroge 98.5 1E-06 3.4E-11 88.3 13.4 106 3-168 198-303 (491)
177 1ges_A Glutathione reductase; 98.5 7.5E-07 2.6E-11 88.2 12.0 98 3-161 167-264 (450)
178 1ebd_A E3BD, dihydrolipoamide 98.5 1.1E-06 3.6E-11 87.2 12.8 100 3-161 170-269 (455)
179 1onf_A GR, grase, glutathione 98.5 2.8E-06 9.5E-11 85.3 15.9 101 4-168 177-278 (500)
180 1zmd_A Dihydrolipoyl dehydroge 98.5 1.4E-06 4.9E-11 86.7 13.5 103 4-161 179-281 (474)
181 1nhp_A NADH peroxidase; oxidor 98.5 7.4E-07 2.5E-11 88.2 11.2 97 3-161 149-245 (447)
182 1dxl_A Dihydrolipoamide dehydr 98.4 8.4E-07 2.9E-11 88.3 11.4 102 3-161 177-278 (470)
183 2r9z_A Glutathione amide reduc 98.4 1E-06 3.6E-11 87.5 11.8 96 4-161 167-263 (463)
184 3lxd_A FAD-dependent pyridine 98.4 1.8E-06 6.1E-11 84.5 12.2 99 3-161 152-250 (415)
185 3ef6_A Toluene 1,2-dioxygenase 98.4 1.3E-06 4.3E-11 85.5 10.9 98 3-161 143-240 (410)
186 2a8x_A Dihydrolipoyl dehydroge 98.4 2.4E-06 8.2E-11 84.9 13.0 100 3-161 171-270 (464)
187 2e1m_A L-glutamate oxidase; L- 98.4 5.6E-07 1.9E-11 86.5 7.9 42 3-44 44-86 (376)
188 4gut_A Lysine-specific histone 98.4 1.6E-06 5.4E-11 91.2 11.9 38 3-40 336-373 (776)
189 1trb_A Thioredoxin reductase; 98.4 3.2E-06 1.1E-10 79.3 12.9 101 3-161 145-246 (320)
190 3ic9_A Dihydrolipoamide dehydr 98.4 3.5E-06 1.2E-10 84.4 13.7 103 4-168 175-277 (492)
191 3oc4_A Oxidoreductase, pyridin 98.4 3.4E-06 1.2E-10 83.5 13.4 100 4-168 148-247 (452)
192 3dgh_A TRXR-1, thioredoxin red 98.4 5E-06 1.7E-10 83.0 14.7 101 4-161 188-288 (483)
193 3fg2_P Putative rubredoxin red 98.4 2.3E-06 8E-11 83.4 12.0 99 3-161 142-240 (404)
194 2qae_A Lipoamide, dihydrolipoy 98.3 3.5E-06 1.2E-10 83.8 13.2 100 4-161 175-275 (468)
195 3dk9_A Grase, GR, glutathione 98.3 3.7E-06 1.3E-10 83.8 13.4 102 4-161 188-292 (478)
196 1fec_A Trypanothione reductase 98.3 2.4E-06 8.3E-11 85.5 11.9 97 4-161 188-287 (490)
197 2wpf_A Trypanothione reductase 98.3 2.5E-06 8.4E-11 85.5 11.8 97 4-161 192-291 (495)
198 1mo9_A ORF3; nucleotide bindin 98.3 2.7E-06 9.3E-11 85.8 12.1 98 4-161 215-315 (523)
199 3dgz_A Thioredoxin reductase 2 98.3 6.4E-06 2.2E-10 82.4 14.7 101 4-161 186-286 (488)
200 1lvl_A Dihydrolipoamide dehydr 98.3 1.2E-06 4.1E-11 87.0 9.3 101 3-168 171-271 (458)
201 2gqw_A Ferredoxin reductase; f 98.3 3.2E-06 1.1E-10 82.6 12.1 94 3-161 145-238 (408)
202 1ojt_A Surface protein; redox- 98.3 1.9E-06 6.6E-11 86.0 10.7 101 3-161 185-285 (482)
203 1q1r_A Putidaredoxin reductase 98.3 3.3E-06 1.1E-10 83.0 12.2 99 3-161 149-249 (431)
204 1xdi_A RV3303C-LPDA; reductase 98.3 3.4E-06 1.2E-10 84.6 12.0 96 4-161 183-278 (499)
205 1zk7_A HGII, reductase, mercur 98.3 3.4E-06 1.2E-10 83.9 11.9 95 3-161 176-270 (467)
206 3gyx_A Adenylylsulfate reducta 98.3 1.9E-06 6.4E-11 89.1 10.2 35 3-37 22-62 (662)
207 3lad_A Dihydrolipoamide dehydr 98.3 5.3E-06 1.8E-10 82.6 13.2 100 3-161 180-279 (476)
208 2zbw_A Thioredoxin reductase; 98.3 5.4E-06 1.9E-10 78.3 12.7 100 3-161 152-251 (335)
209 4gde_A UDP-galactopyranose mut 98.3 1.2E-06 4.1E-11 88.0 8.5 42 3-44 10-52 (513)
210 4dgk_A Phytoene dehydrogenase; 98.3 4.2E-07 1.4E-11 91.1 5.0 41 3-43 1-41 (501)
211 1jnr_A Adenylylsulfate reducta 98.3 1.1E-05 3.9E-10 83.3 15.9 35 3-37 22-60 (643)
212 3iwa_A FAD-dependent pyridine 98.3 4.5E-06 1.5E-10 83.1 12.4 98 3-161 159-257 (472)
213 3o0h_A Glutathione reductase; 98.3 4.1E-06 1.4E-10 83.7 11.7 97 3-161 191-287 (484)
214 2hqm_A GR, grase, glutathione 98.3 4.5E-06 1.5E-10 83.3 11.9 99 3-161 185-284 (479)
215 3cgb_A Pyridine nucleotide-dis 98.3 2.8E-06 9.7E-11 84.8 10.3 96 3-161 186-281 (480)
216 2bc0_A NADH oxidase; flavoprot 98.3 3.7E-06 1.3E-10 84.2 11.1 97 3-161 194-290 (490)
217 4eqs_A Coenzyme A disulfide re 98.3 3.9E-06 1.3E-10 82.7 11.0 93 3-161 147-239 (437)
218 2cdu_A NADPH oxidase; flavoenz 98.3 4.5E-06 1.5E-10 82.6 11.5 97 3-161 149-246 (452)
219 3ntd_A FAD-dependent pyridine 98.2 6.1E-06 2.1E-10 84.0 12.6 114 4-161 152-266 (565)
220 1rsg_A FMS1 protein; FAD bindi 98.2 6E-07 2.1E-11 90.5 4.7 44 1-44 6-50 (516)
221 1xhc_A NADH oxidase /nitrite r 98.2 2.3E-06 7.8E-11 82.4 8.5 90 4-161 144-233 (367)
222 2b9w_A Putative aminooxidase; 98.2 2.5E-06 8.4E-11 83.6 8.3 43 2-44 5-48 (424)
223 4b1b_A TRXR, thioredoxin reduc 98.2 7E-06 2.4E-10 82.9 11.4 101 3-169 223-323 (542)
224 3hyw_A Sulfide-quinone reducta 98.2 4.7E-06 1.6E-10 82.0 9.8 106 204-377 3-110 (430)
225 2bcg_G Secretory pathway GDP d 98.2 1.4E-06 4.7E-11 86.4 5.9 42 3-44 11-52 (453)
226 4dna_A Probable glutathione re 98.2 8.4E-06 2.9E-10 80.9 11.5 97 3-161 170-267 (463)
227 2bi7_A UDP-galactopyranose mut 98.2 1.5E-06 5E-11 84.3 5.6 44 1-44 1-44 (384)
228 3qfa_A Thioredoxin reductase 1 98.2 1.8E-05 6.3E-10 79.7 13.9 104 4-161 211-314 (519)
229 1m6i_A Programmed cell death p 98.2 8.2E-06 2.8E-10 81.7 11.2 98 3-161 180-281 (493)
230 3pl8_A Pyranose 2-oxidase; sub 98.2 1.1E-05 3.6E-10 83.1 12.1 40 3-42 46-85 (623)
231 3ab1_A Ferredoxin--NADP reduct 98.1 1.1E-05 3.6E-10 77.2 11.1 100 3-161 163-262 (360)
232 3itj_A Thioredoxin reductase 1 98.1 1.2E-05 4.1E-10 75.7 11.3 98 3-161 173-270 (338)
233 3vrd_B FCCB subunit, flavocyto 98.1 3.2E-06 1.1E-10 82.2 7.3 111 202-381 1-113 (401)
234 3lov_A Protoporphyrinogen oxid 98.1 2.2E-06 7.4E-11 85.3 6.1 44 1-44 2-47 (475)
235 1v0j_A UDP-galactopyranose mut 98.1 2E-06 6.8E-11 83.8 5.6 42 3-44 7-49 (399)
236 1fl2_A Alkyl hydroperoxide red 98.1 2.6E-05 8.8E-10 72.7 12.9 97 3-161 144-241 (310)
237 4dsg_A UDP-galactopyranose mut 98.1 7.2E-06 2.5E-10 81.9 9.5 50 3-52 9-61 (484)
238 3ics_A Coenzyme A-disulfide re 98.1 1.2E-05 4.2E-10 82.2 11.0 95 3-161 187-281 (588)
239 2q7v_A Thioredoxin reductase; 98.1 1.6E-05 5.6E-10 74.7 11.0 97 3-161 152-248 (325)
240 2yg5_A Putrescine oxidase; oxi 98.1 2E-06 6.7E-11 85.1 4.4 43 2-44 4-46 (453)
241 2q0l_A TRXR, thioredoxin reduc 98.1 1.4E-05 4.9E-10 74.5 10.0 98 3-161 143-240 (311)
242 3cty_A Thioredoxin reductase; 98.0 3.1E-05 1.1E-09 72.5 12.1 96 4-161 156-251 (319)
243 3nks_A Protoporphyrinogen oxid 98.0 2.6E-06 9E-11 84.7 4.8 42 3-44 2-45 (477)
244 3f8d_A Thioredoxin reductase ( 98.0 2E-05 6.8E-10 73.6 10.7 97 3-161 154-250 (323)
245 3hdq_A UDP-galactopyranose mut 98.0 3.9E-06 1.3E-10 81.3 5.8 42 3-44 29-70 (397)
246 1s3e_A Amine oxidase [flavin-c 98.0 3.2E-06 1.1E-10 85.2 5.3 41 3-43 4-44 (520)
247 1vdc_A NTR, NADPH dependent th 98.0 2.5E-05 8.6E-10 73.6 11.1 98 3-161 159-258 (333)
248 2jae_A L-amino acid oxidase; o 98.0 4.3E-06 1.5E-10 83.5 5.6 43 2-44 10-52 (489)
249 3kd9_A Coenzyme A disulfide re 98.0 2.7E-05 9.3E-10 76.9 11.2 96 3-161 148-243 (449)
250 1sez_A Protoporphyrinogen oxid 98.0 5E-06 1.7E-10 83.3 5.9 42 3-44 13-54 (504)
251 3d1c_A Flavin-containing putat 98.0 2.2E-05 7.6E-10 75.0 10.1 104 4-161 167-271 (369)
252 3l8k_A Dihydrolipoyl dehydroge 98.0 3.1E-05 1.1E-09 76.9 11.1 99 4-161 173-271 (466)
253 3lzw_A Ferredoxin--NADP reduct 98.0 4E-05 1.4E-09 71.9 11.1 96 3-161 154-249 (332)
254 3sx6_A Sulfide-quinone reducta 98.0 2.3E-05 7.9E-10 77.1 9.7 49 330-379 65-115 (437)
255 2a87_A TRXR, TR, thioredoxin r 97.9 1.3E-05 4.6E-10 75.7 7.5 97 3-161 155-251 (335)
256 2vvm_A Monoamine oxidase N; FA 97.9 7.2E-06 2.5E-10 82.0 5.7 41 4-44 40-80 (495)
257 4g6h_A Rotenone-insensitive NA 97.9 3.6E-05 1.2E-09 77.1 10.4 98 5-161 219-331 (502)
258 3r9u_A Thioredoxin reductase; 97.9 3.8E-05 1.3E-09 71.5 9.8 97 3-161 147-243 (315)
259 1i8t_A UDP-galactopyranose mut 97.9 8.8E-06 3E-10 78.2 5.3 42 3-44 1-42 (367)
260 3klj_A NAD(FAD)-dependent dehy 97.9 2.2E-05 7.6E-10 75.9 8.1 45 332-377 70-117 (385)
261 2cul_A Glucose-inhibited divis 97.9 2.4E-05 8.2E-10 70.0 7.4 33 204-239 4-36 (232)
262 4a5l_A Thioredoxin reductase; 97.9 6.3E-05 2.2E-09 70.1 10.5 101 4-168 153-253 (314)
263 3k30_A Histamine dehydrogenase 97.9 6.5E-05 2.2E-09 78.3 11.6 98 4-161 524-623 (690)
264 3fbs_A Oxidoreductase; structu 97.9 6.9E-05 2.3E-09 69.1 10.5 33 204-239 3-35 (297)
265 2x8g_A Thioredoxin glutathione 97.8 0.00019 6.4E-09 73.6 14.4 103 4-161 287-394 (598)
266 1hyu_A AHPF, alkyl hydroperoxi 97.8 0.00011 3.7E-09 74.0 12.4 97 3-161 355-452 (521)
267 3p1w_A Rabgdi protein; GDI RAB 97.8 1.4E-05 4.7E-10 79.1 5.5 43 2-44 19-61 (475)
268 1d5t_A Guanine nucleotide diss 97.8 1.6E-05 5.5E-10 78.2 5.8 42 3-44 6-47 (433)
269 2iid_A L-amino-acid oxidase; f 97.8 1.3E-05 4.6E-10 80.1 4.7 41 3-43 33-73 (498)
270 1b37_A Protein (polyamine oxid 97.8 2.1E-05 7.1E-10 78.2 5.7 42 3-44 4-46 (472)
271 3h8l_A NADH oxidase; membrane 97.7 7E-05 2.4E-09 72.9 8.3 107 204-379 2-116 (409)
272 3h28_A Sulfide-quinone reducta 97.7 7.5E-05 2.6E-09 73.2 8.4 47 331-378 63-111 (430)
273 1c0p_A D-amino acid oxidase; a 97.7 4.1E-05 1.4E-09 73.2 5.7 34 3-36 6-39 (363)
274 3ihm_A Styrene monooxygenase A 97.6 3.5E-05 1.2E-09 75.7 4.2 33 4-36 23-55 (430)
275 2z3y_A Lysine-specific histone 97.5 5.7E-05 1.9E-09 78.4 5.2 42 3-44 107-148 (662)
276 2xag_A Lysine-specific histone 97.5 6.7E-05 2.3E-09 79.5 5.5 42 3-44 278-319 (852)
277 3g3e_A D-amino-acid oxidase; F 97.5 4.5E-05 1.5E-09 72.5 3.6 33 4-36 1-39 (351)
278 3g5s_A Methylenetetrahydrofola 97.5 9.6E-05 3.3E-09 70.6 5.5 35 4-38 2-36 (443)
279 2xve_A Flavin-containing monoo 97.5 0.00037 1.3E-08 69.0 9.8 34 3-36 197-230 (464)
280 4gcm_A TRXR, thioredoxin reduc 97.5 0.00066 2.2E-08 63.2 11.0 34 3-36 145-178 (312)
281 1o94_A Tmadh, trimethylamine d 97.4 0.00041 1.4E-08 72.7 9.0 69 4-107 529-599 (729)
282 2gv8_A Monooxygenase; FMO, FAD 97.4 0.00042 1.4E-08 68.2 8.6 34 3-36 212-246 (447)
283 2gag_A Heterotetrameric sarcos 97.3 0.00063 2.2E-08 73.5 10.4 93 4-161 285-382 (965)
284 2vdc_G Glutamate synthase [NAD 97.3 0.00023 7.7E-09 70.4 6.2 33 4-36 265-298 (456)
285 4a9w_A Monooxygenase; baeyer-v 97.3 0.00028 9.6E-09 66.6 6.4 33 3-36 163-195 (357)
286 4fk1_A Putative thioredoxin re 97.3 0.0014 4.7E-08 60.8 11.0 33 203-238 6-38 (304)
287 1lqt_A FPRA; NADP+ derivative, 97.2 0.00093 3.2E-08 66.0 9.5 35 3-37 147-202 (456)
288 3gwf_A Cyclohexanone monooxyge 97.2 0.00061 2.1E-08 68.8 8.3 35 3-37 178-212 (540)
289 3alj_A 2-methyl-3-hydroxypyrid 97.2 0.0004 1.4E-08 66.7 6.7 50 327-377 110-161 (379)
290 1cjc_A Protein (adrenodoxin re 97.2 0.0013 4.6E-08 64.9 10.5 34 3-36 145-199 (460)
291 2x3n_A Probable FAD-dependent 97.2 0.00091 3.1E-08 64.6 8.9 49 328-377 111-167 (399)
292 2bry_A NEDD9 interacting prote 97.2 0.00035 1.2E-08 69.9 6.0 37 201-240 90-126 (497)
293 1ps9_A 2,4-dienoyl-COA reducta 97.2 0.00077 2.6E-08 70.0 8.8 29 3-31 494-522 (671)
294 3v76_A Flavoprotein; structura 97.2 0.00065 2.2E-08 66.3 7.5 35 203-240 27-61 (417)
295 3ayj_A Pro-enzyme of L-phenyla 97.1 0.00018 6E-09 74.5 2.6 36 3-38 56-100 (721)
296 1gte_A Dihydropyrimidine dehyd 97.0 0.0025 8.4E-08 69.4 10.5 33 4-36 333-366 (1025)
297 3nlc_A Uncharacterized protein 97.0 0.0012 4E-08 66.6 7.4 49 328-377 224-278 (549)
298 3uox_A Otemo; baeyer-villiger 97.0 0.0033 1.1E-07 63.5 10.8 35 3-37 185-219 (545)
299 1kdg_A CDH, cellobiose dehydro 97.0 0.00055 1.9E-08 69.2 5.0 36 2-37 6-41 (546)
300 2i0z_A NAD(FAD)-utilizing dehy 96.9 0.0017 5.8E-08 63.9 7.8 48 328-376 138-191 (447)
301 3t37_A Probable dehydrogenase; 96.9 0.00068 2.3E-08 68.1 4.6 35 3-37 17-52 (526)
302 2vou_A 2,6-dihydroxypyridine h 96.8 0.0012 4.2E-08 63.7 5.6 35 203-240 5-39 (397)
303 1n4w_A CHOD, cholesterol oxida 96.8 0.001 3.6E-08 66.5 5.2 38 2-39 4-41 (504)
304 3q9t_A Choline dehydrogenase a 96.7 0.00093 3.2E-08 67.9 4.2 35 3-37 6-41 (577)
305 1ju2_A HydroxynitrIle lyase; f 96.7 0.00075 2.6E-08 68.1 3.3 35 3-38 26-60 (536)
306 1rp0_A ARA6, thiazole biosynth 96.7 0.0032 1.1E-07 57.8 7.4 35 203-240 39-74 (284)
307 2gqf_A Hypothetical protein HI 96.7 0.0027 9.1E-08 61.5 6.9 34 204-240 5-38 (401)
308 3rp8_A Flavoprotein monooxygen 96.7 0.002 6.7E-08 62.4 6.0 37 201-240 21-57 (407)
309 4ap3_A Steroid monooxygenase; 96.6 0.0019 6.4E-08 65.3 5.8 34 203-239 21-54 (549)
310 1yvv_A Amine oxidase, flavin-c 96.6 0.0048 1.6E-07 57.7 8.3 33 204-239 3-35 (336)
311 1y0p_A Fumarate reductase flav 96.6 0.019 6.5E-07 58.2 13.2 35 203-240 126-160 (571)
312 1gpe_A Protein (glucose oxidas 96.6 0.0016 5.5E-08 66.4 5.1 37 2-38 23-60 (587)
313 1vg0_A RAB proteins geranylger 96.6 0.002 7E-08 65.7 5.8 42 3-44 8-49 (650)
314 3qvp_A Glucose oxidase; oxidor 96.5 0.0015 5E-08 66.5 4.2 34 3-36 19-53 (583)
315 1coy_A Cholesterol oxidase; ox 96.5 0.0019 6.6E-08 64.6 5.1 35 3-37 11-45 (507)
316 3ces_A MNMG, tRNA uridine 5-ca 96.5 0.0092 3.1E-07 61.0 10.0 34 203-239 28-61 (651)
317 3nix_A Flavoprotein/dehydrogen 96.5 0.0044 1.5E-07 60.1 7.0 33 204-239 6-38 (421)
318 4b63_A L-ornithine N5 monooxyg 96.4 0.019 6.6E-07 57.2 11.4 34 3-36 246-281 (501)
319 3i3l_A Alkylhalidase CMLS; fla 96.4 0.0046 1.6E-07 63.0 6.7 35 202-239 22-56 (591)
320 3fim_B ARYL-alcohol oxidase; A 96.3 0.0019 6.6E-08 65.4 3.6 36 3-38 2-38 (566)
321 2xdo_A TETX2 protein; tetracyc 96.3 0.0073 2.5E-07 58.2 7.5 35 203-240 26-60 (398)
322 3cp8_A TRNA uridine 5-carboxym 96.3 0.0068 2.3E-07 61.9 7.5 35 202-239 20-54 (641)
323 2zxi_A TRNA uridine 5-carboxym 96.2 0.008 2.7E-07 61.2 7.6 34 203-239 27-60 (637)
324 3dje_A Fructosyl amine: oxygen 96.2 0.0064 2.2E-07 59.3 6.8 35 203-239 6-40 (438)
325 1id1_A Putative potassium chan 96.2 0.0057 2E-07 50.4 5.4 35 1-35 1-35 (153)
326 1k0i_A P-hydroxybenzoate hydro 96.2 0.0074 2.5E-07 57.9 6.8 34 204-240 3-36 (394)
327 3qj4_A Renalase; FAD/NAD(P)-bi 96.2 0.0098 3.3E-07 55.9 7.5 33 204-239 2-37 (342)
328 2jbv_A Choline oxidase; alcoho 96.1 0.0035 1.2E-07 63.3 4.3 36 3-38 13-49 (546)
329 4hb9_A Similarities with proba 96.1 0.015 5.2E-07 55.7 8.6 33 205-240 3-35 (412)
330 3fmw_A Oxygenase; mithramycin, 96.1 0.0051 1.8E-07 62.4 5.4 35 203-240 49-83 (570)
331 1qo8_A Flavocytochrome C3 fuma 96.0 0.055 1.9E-06 54.7 12.8 35 203-240 121-155 (566)
332 1y56_B Sarcosine oxidase; dehy 96.0 0.025 8.5E-07 53.8 9.7 34 203-239 5-38 (382)
333 3dme_A Conserved exported prot 96.0 0.051 1.7E-06 51.1 11.9 33 204-239 5-37 (369)
334 3e1t_A Halogenase; flavoprotei 96.0 0.0074 2.5E-07 60.4 6.1 33 204-239 8-40 (512)
335 1d4d_A Flavocytochrome C fumar 95.9 0.067 2.3E-06 54.2 12.9 35 203-240 126-160 (572)
336 3llv_A Exopolyphosphatase-rela 95.9 0.0083 2.8E-07 48.6 5.0 34 3-36 6-39 (141)
337 2gag_B Heterotetrameric sarcos 95.9 0.027 9.1E-07 54.0 9.5 34 203-239 21-56 (405)
338 3pvc_A TRNA 5-methylaminomethy 95.9 0.04 1.4E-06 57.2 11.0 34 203-239 264-297 (689)
339 4at0_A 3-ketosteroid-delta4-5a 95.8 0.068 2.3E-06 53.3 12.1 34 204-240 42-75 (510)
340 2qa2_A CABE, polyketide oxygen 95.8 0.025 8.6E-07 56.3 8.9 36 202-240 11-46 (499)
341 1lss_A TRK system potassium up 95.7 0.01 3.4E-07 47.7 4.7 34 3-36 4-37 (140)
342 3ps9_A TRNA 5-methylaminomethy 95.7 0.027 9.4E-07 58.3 9.2 34 203-239 272-305 (676)
343 2qa1_A PGAE, polyketide oxygen 95.7 0.028 9.5E-07 56.0 8.7 36 202-240 10-45 (500)
344 1ryi_A Glycine oxidase; flavop 95.7 0.017 5.7E-07 55.0 6.7 34 203-239 17-50 (382)
345 3cgv_A Geranylgeranyl reductas 95.6 0.0043 1.5E-07 59.4 2.5 34 204-240 5-38 (397)
346 2g1u_A Hypothetical protein TM 95.6 0.013 4.3E-07 48.4 4.9 34 3-36 19-52 (155)
347 1w4x_A Phenylacetone monooxyge 95.6 0.031 1.1E-06 56.2 8.6 34 203-239 16-49 (542)
348 3atr_A Conserved archaeal prot 95.5 0.018 6.2E-07 56.5 6.4 34 204-240 7-40 (453)
349 3fwz_A Inner membrane protein 95.5 0.016 5.6E-07 46.9 5.1 34 3-36 7-40 (140)
350 2hmt_A YUAA protein; RCK, KTN, 95.4 0.016 5.5E-07 46.6 4.9 34 3-36 6-39 (144)
351 3ihg_A RDME; flavoenzyme, anth 95.3 0.046 1.6E-06 54.8 8.9 35 203-240 5-39 (535)
352 3dfz_A SIRC, precorrin-2 dehyd 95.3 0.024 8.3E-07 49.8 5.8 35 201-238 29-63 (223)
353 3ic5_A Putative saccharopine d 95.3 0.017 5.9E-07 44.7 4.4 34 3-36 5-39 (118)
354 2aqj_A Tryptophan halogenase, 95.2 0.016 5.5E-07 58.2 5.2 49 328-377 169-223 (538)
355 4e12_A Diketoreductase; oxidor 95.1 0.02 6.7E-07 52.5 5.0 36 1-36 2-37 (283)
356 2pyx_A Tryptophan halogenase; 94.9 0.025 8.7E-07 56.6 5.6 48 329-377 180-234 (526)
357 3ghy_A Ketopantoate reductase 94.8 0.025 8.6E-07 53.1 5.0 35 1-35 1-35 (335)
358 3c85_A Putative glutathione-re 94.8 0.028 9.5E-07 47.7 4.8 34 3-36 39-73 (183)
359 3c96_A Flavin-containing monoo 94.8 0.032 1.1E-06 53.8 5.7 35 203-240 4-39 (410)
360 2weu_A Tryptophan 5-halogenase 94.7 0.044 1.5E-06 54.6 6.6 49 328-377 177-231 (511)
361 2dpo_A L-gulonate 3-dehydrogen 94.6 0.03 1E-06 52.3 4.8 36 1-36 4-39 (319)
362 2wdq_A Succinate dehydrogenase 94.5 0.39 1.3E-05 48.7 13.2 34 204-240 8-41 (588)
363 1pj5_A N,N-dimethylglycine oxi 94.3 0.078 2.7E-06 56.3 7.9 35 203-239 4-38 (830)
364 1bg6_A N-(1-D-carboxylethyl)-L 94.3 0.035 1.2E-06 52.4 4.7 36 1-36 2-37 (359)
365 2ew2_A 2-dehydropantoate 2-red 94.3 0.036 1.2E-06 51.2 4.6 36 1-36 1-36 (316)
366 3dfz_A SIRC, precorrin-2 dehyd 94.2 0.048 1.6E-06 47.9 4.9 34 2-35 30-63 (223)
367 1f0y_A HCDH, L-3-hydroxyacyl-C 94.1 0.046 1.6E-06 50.5 5.0 34 3-36 15-48 (302)
368 3gpi_A NAD-dependent epimerase 94.1 0.053 1.8E-06 49.3 5.3 36 1-36 1-36 (286)
369 4huj_A Uncharacterized protein 94.1 0.023 7.9E-07 49.9 2.7 36 1-36 21-57 (220)
370 1chu_A Protein (L-aspartate ox 94.0 0.16 5.6E-06 50.9 9.1 33 204-240 9-41 (540)
371 3l4b_C TRKA K+ channel protien 93.9 0.046 1.6E-06 47.8 4.3 32 5-36 2-33 (218)
372 3gvi_A Malate dehydrogenase; N 93.9 0.056 1.9E-06 50.4 4.9 36 1-36 5-41 (324)
373 3gg2_A Sugar dehydrogenase, UD 93.8 0.05 1.7E-06 53.3 4.7 35 1-36 1-35 (450)
374 3g79_A NDP-N-acetyl-D-galactos 93.8 0.053 1.8E-06 53.4 4.8 36 2-37 17-54 (478)
375 1kyq_A Met8P, siroheme biosynt 93.7 0.054 1.8E-06 49.2 4.4 35 2-36 12-46 (274)
376 2x5o_A UDP-N-acetylmuramoylala 93.6 0.051 1.7E-06 53.1 4.4 37 2-38 4-40 (439)
377 3p7m_A Malate dehydrogenase; p 93.5 0.072 2.5E-06 49.7 5.1 36 1-36 3-39 (321)
378 3lk7_A UDP-N-acetylmuramoylala 93.5 0.059 2E-06 52.8 4.8 34 3-36 9-42 (451)
379 3k96_A Glycerol-3-phosphate de 93.5 0.069 2.4E-06 50.6 5.0 34 3-36 29-62 (356)
380 1kf6_A Fumarate reductase flav 93.5 0.95 3.2E-05 46.0 13.8 35 204-239 6-40 (602)
381 3jsk_A Cypbp37 protein; octame 93.5 0.13 4.3E-06 48.4 6.6 35 203-240 79-115 (344)
382 2rcy_A Pyrroline carboxylate r 93.4 0.07 2.4E-06 47.9 4.7 36 1-36 2-41 (262)
383 2gmh_A Electron transfer flavo 93.3 0.075 2.6E-06 53.9 5.3 34 204-240 36-75 (584)
384 3tri_A Pyrroline-5-carboxylate 93.3 0.083 2.8E-06 48.2 5.1 36 1-36 1-39 (280)
385 3tl2_A Malate dehydrogenase; c 93.3 0.078 2.7E-06 49.3 4.9 35 1-35 6-41 (315)
386 3i83_A 2-dehydropantoate 2-red 93.3 0.074 2.5E-06 49.5 4.8 32 4-35 3-34 (320)
387 4e21_A 6-phosphogluconate dehy 93.3 0.072 2.5E-06 50.5 4.7 36 1-36 20-55 (358)
388 2zyd_A 6-phosphogluconate dehy 93.1 0.077 2.6E-06 52.4 4.8 36 1-36 13-48 (480)
389 3doj_A AT3G25530, dehydrogenas 93.0 0.088 3E-06 48.8 4.8 34 3-36 21-54 (310)
390 3dtt_A NADP oxidoreductase; st 93.0 0.096 3.3E-06 46.7 4.9 35 2-36 18-52 (245)
391 2h88_A Succinate dehydrogenase 93.0 1.5 5E-05 44.7 14.2 33 204-239 19-51 (621)
392 3mog_A Probable 3-hydroxybutyr 92.9 0.091 3.1E-06 51.9 5.0 36 1-36 3-38 (483)
393 2raf_A Putative dinucleotide-b 92.9 0.1 3.4E-06 45.4 4.8 34 3-36 19-52 (209)
394 2ewd_A Lactate dehydrogenase,; 92.9 0.088 3E-06 49.0 4.6 36 1-36 1-38 (317)
395 3hn2_A 2-dehydropantoate 2-red 92.8 0.08 2.7E-06 49.1 4.2 33 4-36 3-35 (312)
396 3ado_A Lambda-crystallin; L-gu 92.8 0.099 3.4E-06 48.6 4.8 34 3-36 6-39 (319)
397 4ffl_A PYLC; amino acid, biosy 92.8 0.11 3.6E-06 49.3 5.1 34 3-36 1-34 (363)
398 1zcj_A Peroxisomal bifunctiona 92.8 0.093 3.2E-06 51.6 4.8 35 2-36 36-70 (463)
399 3k6j_A Protein F01G10.3, confi 92.7 0.1 3.5E-06 51.0 5.0 35 2-36 53-87 (460)
400 3qha_A Putative oxidoreductase 92.7 0.082 2.8E-06 48.6 4.2 35 3-37 15-49 (296)
401 1y56_A Hypothetical protein PH 92.7 0.21 7E-06 49.5 7.3 46 87-161 267-312 (493)
402 1evy_A Glycerol-3-phosphate de 92.6 0.057 1.9E-06 51.3 3.0 33 4-36 16-48 (366)
403 2a9f_A Putative malic enzyme ( 92.6 0.099 3.4E-06 49.7 4.6 34 2-35 187-221 (398)
404 3kkj_A Amine oxidase, flavin-c 92.6 0.066 2.2E-06 47.3 3.3 33 205-240 4-36 (336)
405 2e5v_A L-aspartate oxidase; ar 92.6 1.4 4.8E-05 43.2 13.2 31 205-238 1-31 (472)
406 1hdo_A Biliverdin IX beta redu 92.6 0.13 4.5E-06 43.8 5.1 36 1-36 1-37 (206)
407 1t2d_A LDH-P, L-lactate dehydr 92.6 0.12 4.1E-06 48.2 5.1 34 3-36 4-38 (322)
408 3pid_A UDP-glucose 6-dehydroge 92.6 0.095 3.2E-06 50.8 4.5 33 3-36 36-68 (432)
409 1ks9_A KPA reductase;, 2-dehyd 92.6 0.11 3.9E-06 47.2 4.9 33 5-37 2-34 (291)
410 2izz_A Pyrroline-5-carboxylate 92.6 0.1 3.5E-06 48.6 4.7 36 1-36 20-59 (322)
411 1x0v_A GPD-C, GPDH-C, glycerol 92.6 0.062 2.1E-06 50.7 3.2 36 1-36 6-48 (354)
412 2hjr_A Malate dehydrogenase; m 92.5 0.12 4.2E-06 48.3 5.1 33 4-36 15-48 (328)
413 2y0c_A BCEC, UDP-glucose dehyd 92.5 0.1 3.4E-06 51.6 4.7 34 3-36 8-41 (478)
414 1vl6_A Malate oxidoreductase; 92.5 0.1 3.6E-06 49.4 4.5 34 2-35 191-225 (388)
415 1lld_A L-lactate dehydrogenase 92.4 0.11 3.8E-06 48.2 4.7 32 4-35 8-41 (319)
416 2vns_A Metalloreductase steap3 92.4 0.14 4.7E-06 44.7 5.0 34 3-36 28-61 (215)
417 3fi9_A Malate dehydrogenase; s 92.3 0.14 4.6E-06 48.2 5.1 35 1-35 6-43 (343)
418 3g0o_A 3-hydroxyisobutyrate de 92.3 0.12 4.1E-06 47.6 4.7 34 3-36 7-40 (303)
419 4gwg_A 6-phosphogluconate dehy 92.3 0.13 4.5E-06 50.6 5.2 36 1-36 2-37 (484)
420 1y6j_A L-lactate dehydrogenase 92.2 0.13 4.3E-06 47.9 4.8 34 3-36 7-42 (318)
421 4dio_A NAD(P) transhydrogenase 92.2 0.14 4.7E-06 49.2 5.0 34 3-36 190-223 (405)
422 2o3j_A UDP-glucose 6-dehydroge 92.2 0.091 3.1E-06 51.9 3.9 34 3-36 9-44 (481)
423 3vtf_A UDP-glucose 6-dehydroge 92.2 0.12 3.9E-06 50.4 4.5 34 3-36 21-54 (444)
424 2dkh_A 3-hydroxybenzoate hydro 92.2 0.14 4.7E-06 52.6 5.4 34 204-240 33-67 (639)
425 2uyy_A N-PAC protein; long-cha 92.1 0.15 5E-06 47.3 5.0 34 3-36 30-63 (316)
426 3d0o_A L-LDH 1, L-lactate dehy 92.1 0.13 4.3E-06 47.9 4.5 35 1-35 4-40 (317)
427 1pzg_A LDH, lactate dehydrogen 92.0 0.13 4.3E-06 48.2 4.5 33 4-36 10-43 (331)
428 2iz1_A 6-phosphogluconate dehy 91.9 0.15 5.2E-06 50.3 5.2 36 1-36 3-38 (474)
429 3qsg_A NAD-binding phosphogluc 91.9 0.12 4.1E-06 47.9 4.1 33 3-35 24-57 (312)
430 3g17_A Similar to 2-dehydropan 91.9 0.13 4.4E-06 47.2 4.3 33 4-36 3-35 (294)
431 4a7p_A UDP-glucose dehydrogena 91.8 0.15 5.1E-06 49.8 4.9 36 3-38 8-43 (446)
432 3b1f_A Putative prephenate deh 91.8 0.12 4.3E-06 47.1 4.1 36 1-36 4-41 (290)
433 4dll_A 2-hydroxy-3-oxopropiona 91.7 0.14 4.8E-06 47.6 4.5 34 3-36 31-64 (320)
434 3oj0_A Glutr, glutamyl-tRNA re 91.7 0.075 2.6E-06 43.0 2.3 33 4-36 22-54 (144)
435 2q3e_A UDP-glucose 6-dehydroge 91.6 0.11 3.9E-06 51.0 3.9 36 1-36 2-40 (467)
436 3l6d_A Putative oxidoreductase 91.6 0.19 6.5E-06 46.4 5.2 34 3-36 9-42 (306)
437 3p2y_A Alanine dehydrogenase/p 91.6 0.14 4.6E-06 48.8 4.2 34 3-36 184-217 (381)
438 3ggo_A Prephenate dehydrogenas 91.6 0.18 6.2E-06 46.8 5.0 34 3-36 33-68 (314)
439 2h78_A Hibadh, 3-hydroxyisobut 91.6 0.14 4.7E-06 47.1 4.2 34 3-36 3-36 (302)
440 2v6b_A L-LDH, L-lactate dehydr 91.5 0.17 5.7E-06 46.8 4.6 32 5-36 2-35 (304)
441 3pdu_A 3-hydroxyisobutyrate de 91.4 0.13 4.4E-06 47.0 3.7 33 4-36 2-34 (287)
442 3pef_A 6-phosphogluconate dehy 91.2 0.18 6.1E-06 46.0 4.5 33 4-36 2-34 (287)
443 1mv8_A GMD, GDP-mannose 6-dehy 91.2 0.14 4.9E-06 49.9 4.0 32 5-36 2-33 (436)
444 3eag_A UDP-N-acetylmuramate:L- 91.1 0.2 6.8E-06 46.7 4.8 34 3-36 4-38 (326)
445 1ur5_A Malate dehydrogenase; o 91.1 0.2 7E-06 46.3 4.8 33 4-36 3-36 (309)
446 3e8x_A Putative NAD-dependent 91.1 0.21 7E-06 43.9 4.7 35 2-36 20-55 (236)
447 1zej_A HBD-9, 3-hydroxyacyl-CO 91.0 0.2 6.7E-06 46.0 4.5 33 3-36 12-44 (293)
448 1nyt_A Shikimate 5-dehydrogena 90.8 0.25 8.5E-06 44.7 5.0 34 2-35 118-151 (271)
449 1jw9_B Molybdopterin biosynthe 90.7 0.2 6.7E-06 44.8 4.2 33 3-35 31-64 (249)
450 3ego_A Probable 2-dehydropanto 90.7 0.21 7.2E-06 46.1 4.5 32 4-36 3-34 (307)
451 3hwr_A 2-dehydropantoate 2-red 90.7 0.22 7.6E-06 46.2 4.6 33 3-36 19-51 (318)
452 3ius_A Uncharacterized conserv 90.6 0.21 7.3E-06 45.1 4.4 34 3-36 5-38 (286)
453 3i6i_A Putative leucoanthocyan 90.6 0.26 8.8E-06 46.1 5.1 36 1-36 8-44 (346)
454 2g1u_A Hypothetical protein TM 90.5 0.21 7.2E-06 40.9 3.9 39 199-240 15-53 (155)
455 1x13_A NAD(P) transhydrogenase 90.5 0.21 7.1E-06 48.1 4.4 34 3-36 172-205 (401)
456 3l9w_A Glutathione-regulated p 90.5 0.26 9E-06 47.6 5.1 34 3-36 4-37 (413)
457 1pjq_A CYSG, siroheme synthase 90.4 0.24 8.1E-06 48.6 4.8 35 2-36 11-45 (457)
458 1jay_A Coenzyme F420H2:NADP+ o 90.4 0.26 8.8E-06 42.5 4.6 32 5-36 2-34 (212)
459 3gt0_A Pyrroline-5-carboxylate 90.4 0.28 9.7E-06 43.6 5.0 33 4-36 3-39 (247)
460 4g65_A TRK system potassium up 90.3 0.13 4.6E-06 50.4 2.9 34 3-36 3-36 (461)
461 1hyh_A L-hicdh, L-2-hydroxyiso 90.2 0.22 7.6E-06 46.0 4.2 33 4-36 2-36 (309)
462 4ezb_A Uncharacterized conserv 90.1 0.26 9E-06 45.7 4.6 33 4-36 25-58 (317)
463 1dlj_A UDP-glucose dehydrogena 90.1 0.2 6.9E-06 48.2 4.0 31 5-36 2-32 (402)
464 3cky_A 2-hydroxymethyl glutara 90.1 0.23 8E-06 45.4 4.2 34 3-36 4-37 (301)
465 3pqe_A L-LDH, L-lactate dehydr 90.1 0.26 8.9E-06 45.9 4.5 33 3-35 5-39 (326)
466 3dhn_A NAD-dependent epimerase 90.0 0.22 7.6E-06 43.3 3.8 36 1-36 1-38 (227)
467 1guz_A Malate dehydrogenase; o 89.9 0.28 9.6E-06 45.4 4.7 32 5-36 2-35 (310)
468 1z82_A Glycerol-3-phosphate de 89.9 0.27 9.2E-06 45.9 4.6 33 4-36 15-47 (335)
469 4gbj_A 6-phosphogluconate dehy 89.9 0.2 6.7E-06 46.1 3.6 37 1-38 4-40 (297)
470 1l7d_A Nicotinamide nucleotide 89.9 0.27 9.3E-06 47.0 4.7 34 3-36 172-205 (384)
471 1a5z_A L-lactate dehydrogenase 89.9 0.24 8.2E-06 46.0 4.2 32 5-36 2-35 (319)
472 1vpd_A Tartronate semialdehyde 89.8 0.24 8.1E-06 45.4 4.0 33 4-36 6-38 (299)
473 1txg_A Glycerol-3-phosphate de 89.8 0.24 8.2E-06 46.1 4.2 30 5-34 2-31 (335)
474 4aj2_A L-lactate dehydrogenase 89.8 0.33 1.1E-05 45.3 5.0 34 2-35 18-53 (331)
475 2egg_A AROE, shikimate 5-dehyd 89.8 0.31 1.1E-05 44.7 4.8 33 3-35 141-174 (297)
476 1pjq_A CYSG, siroheme synthase 89.8 0.33 1.1E-05 47.6 5.2 35 201-238 10-44 (457)
477 2g5c_A Prephenate dehydrogenas 89.7 0.31 1.1E-05 44.2 4.7 33 4-36 2-36 (281)
478 3phh_A Shikimate dehydrogenase 89.7 0.34 1.2E-05 43.7 4.9 33 4-36 119-151 (269)
479 1ff9_A Saccharopine reductase; 89.7 0.25 8.6E-06 48.3 4.3 36 1-36 1-36 (450)
480 1pjc_A Protein (L-alanine dehy 89.6 0.32 1.1E-05 46.0 4.9 34 3-36 167-200 (361)
481 3q2o_A Phosphoribosylaminoimid 89.5 0.38 1.3E-05 45.9 5.4 34 3-36 14-47 (389)
482 3vku_A L-LDH, L-lactate dehydr 89.4 0.31 1.1E-05 45.4 4.5 33 3-35 9-43 (326)
483 3ew7_A LMO0794 protein; Q8Y8U8 89.3 0.38 1.3E-05 41.4 4.8 32 5-36 2-34 (221)
484 2f1k_A Prephenate dehydrogenas 89.3 0.33 1.1E-05 43.9 4.6 32 5-36 2-33 (279)
485 2eez_A Alanine dehydrogenase; 89.2 0.35 1.2E-05 45.9 4.9 34 3-36 166-199 (369)
486 3c24_A Putative oxidoreductase 89.2 0.35 1.2E-05 44.0 4.7 33 4-36 12-45 (286)
487 1yj8_A Glycerol-3-phosphate de 89.2 0.27 9.2E-06 46.7 4.1 34 4-37 22-62 (375)
488 2z1m_A GDP-D-mannose dehydrata 89.2 0.35 1.2E-05 44.8 4.8 36 1-36 1-37 (345)
489 2wtb_A MFP2, fatty acid multif 89.2 0.34 1.2E-05 50.4 5.0 34 3-36 312-345 (725)
490 2cvz_A Dehydrogenase, 3-hydrox 89.2 0.29 9.9E-06 44.5 4.1 32 4-36 2-33 (289)
491 1qyc_A Phenylcoumaran benzylic 89.1 0.35 1.2E-05 44.2 4.7 36 1-36 1-38 (308)
492 4b4o_A Epimerase family protei 89.1 0.44 1.5E-05 43.4 5.3 36 4-39 1-37 (298)
493 2pv7_A T-protein [includes: ch 89.1 0.37 1.3E-05 44.2 4.8 33 4-36 22-55 (298)
494 2i6t_A Ubiquitin-conjugating e 89.0 0.32 1.1E-05 44.8 4.3 34 3-36 14-49 (303)
495 2vhw_A Alanine dehydrogenase; 89.0 0.37 1.3E-05 45.9 4.9 34 3-36 168-201 (377)
496 1p77_A Shikimate 5-dehydrogena 89.0 0.31 1.1E-05 44.1 4.1 34 3-36 119-152 (272)
497 3h8v_A Ubiquitin-like modifier 88.9 0.3 1E-05 44.7 3.9 33 3-35 36-69 (292)
498 2gf2_A Hibadh, 3-hydroxyisobut 88.9 0.34 1.2E-05 44.2 4.4 32 5-36 2-33 (296)
499 1ldn_A L-lactate dehydrogenase 88.8 0.36 1.2E-05 44.7 4.5 34 3-36 6-41 (316)
500 3vps_A TUNA, NAD-dependent epi 88.8 0.42 1.4E-05 43.7 5.0 35 3-37 7-42 (321)
No 1
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=100.00 E-value=1.3e-40 Score=338.89 Aligned_cols=369 Identities=21% Similarity=0.352 Sum_probs=270.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-cCCcceecCCccccccCCCCCC---CCCCCCCCChh
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPWP---DSVTTDFPDHN 77 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-~~~~~~l~~~~~~~~~~~~~~~---~~~~~~~~~~~ 77 (418)
..+||+|||||++|+++|..|++.|++++|||+++.+||.|.. +||+..+.++...|.+...+.. ..+...++++.
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GGtw~~~~yPg~~~d~~~~~y~~~f~~~~~~~~~~~~~~~~~~ 87 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGGTWYWNRYPGCRLDTESYAYGYFALKGIIPEWEWSENFASQP 87 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCHHHHCHHHHTTSSTTCCCSBSSCBHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCceeecCchhhcccccCcccccCCCccccCCCHH
Confidence 3579999999999999999999999999999999999999987 9999999999888877643321 22356788999
Q ss_pred HHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEe
Q 014821 78 QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILC 157 (418)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlA 157 (418)
++..|++..++++++.+.++++++|++++..+ ..+.|.|++.++ .++.||+||+|
T Consensus 88 ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------------~~~~w~V~~~~G-----~~~~ad~lV~A 142 (545)
T 3uox_A 88 EMLRYVNRAADAMDVRKHYRFNTRVTAARYVE--------------------NDRLWEVTLDNE-----EVVTCRFLISA 142 (545)
T ss_dssp HHHHHHHHHHHHHTCGGGEECSCCEEEEEEEG--------------------GGTEEEEEETTT-----EEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCcCcEEECCEEEEEEEeC--------------------CCCEEEEEECCC-----CEEEeCEEEEC
Confidence 99999999999999877899999999999866 135799998876 58999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhh-hhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEE
Q 014821 158 VGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLY 236 (418)
Q Consensus 158 tG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~ 236 (418)
||.. +.|.+|+++ |++.|.+..+|+..+..-.... ......+|+|+|||+|.+|+|+|.+|+..+.+ |+++.
T Consensus 143 tG~~-s~p~~p~ip---G~~~f~g~~~h~~~~~~~~~~~~~~~~~~~krV~VIG~G~tgve~a~~la~~~~~---Vtv~~ 215 (545)
T 3uox_A 143 TGPL-SASRMPDIK---GIDSFKGESFHSSRWPTDAEGAPKGVDFTGKRVGVIGTGATGVQIIPIAAETAKE---LYVFQ 215 (545)
T ss_dssp CCSC-BC---CCCT---TGGGCCSEEEEGGGCCBCTTSCBSCCCCBTCEEEEECCSHHHHHHHHHHTTTBSE---EEEEE
T ss_pred cCCC-CCCcCCCCC---CccccCCCeEEcccccccccccccccccCCCeEEEECCCccHHHHHHHHHhhCCE---EEEEE
Confidence 9987 588999998 9999999999998876520000 00235689999999999999999999988754 99999
Q ss_pred ecCcccccCCCCCCCcchhhhhhHHHH----Hh---hcC-----------CC--------chhHHHHHH-----------
Q 014821 237 RTEHWNIPDYFPWGFPLAYLYLNRFAE----LL---VHK-----------PG--------EGFLLSLLA----------- 279 (418)
Q Consensus 237 r~~~~~~~~~~~~g~~~~~~~~~~~~~----~~---~~~-----------~~--------~~~~~~~~~----------- 279 (418)
|++.|++|... .+++......+.. .. ... +. ...+...+.
T Consensus 216 r~~~~i~p~~~---~~~~~~~~~~l~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~ 292 (545)
T 3uox_A 216 RTPNWCTPLGN---SPMSKEKMDSLRNRYPTILEYVKSTDTAFPYHRDPRKGTDVSESERDAFFEELYRQPGYGIWLSGF 292 (545)
T ss_dssp SSCCCCEECCC---CBCCHHHHHHHHHTHHHHHHHHTTSSSSSSCCCBSSCGGGSCHHHHHHHHHHHHHSSSTHHHHTSB
T ss_pred cCCCccccCCc---CCCCHHHHHHHHhhhHHHHHHHhhcccccccccccchhhhCCHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 99999998765 4444333222211 10 000 00 000111110
Q ss_pred -h--hhhHHHHHHHHHHHHHHHhhh--hhcccCCCC-CcccccccccccccccCcchhhhhccCcEEEe---ccCceeEe
Q 014821 280 -T--MLSPLRWAISKFVEADIKKKH--RLAKFGMVP-KHSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFC 350 (418)
Q Consensus 280 -~--~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~v~~~~ 350 (418)
. ........+.+.+...++.+. +.....+.| .++. +|+++++++++++.+++++|+++ ...|.+++
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----g~kR~~~~~~y~~al~~~nV~lv~~~~~~I~~it 367 (545)
T 3uox_A 293 RDLLLNKESNKFLADFVAKKIRQRVKDPVVAEKLIPKDHPF-----GAKRVPMETNYYETYNRDNVHLVDIREAPIQEVT 367 (545)
T ss_dssp TTTTTCHHHHHHHHHHHHHHHHHHCSCHHHHHHTSCSSSCT-----TSSCCCEESSHHHHTTSTTEEEEETTTSCEEEEE
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CCCccCCCccHHHHhcCCCEEEEecCCCCceEEc
Confidence 0 012333444555555554443 233456888 4666 89999999999999999999999 56799999
Q ss_pred cCcEEEcCCceeeeccEEEEccCCCCCcchhccc---cch--hhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 351 EDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIF---LSQ--TFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 351 ~~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l---~~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
+++|+++|| + +++|+||+||||+.......-+ +.. -|.+.. ......|..+ ++++||+|+
T Consensus 368 ~~gv~~~dG-~-~~~D~IV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w----~~~~~~y~g~~~~gfPN~f~ 433 (545)
T 3uox_A 368 PEGIKTADA-A-YDLDVIIYATGFDAVTGSLDRIDIRGKDNVRLIDAW----AEGPSTYLGLQARGFPNFFT 433 (545)
T ss_dssp TTEEEESSC-E-EECSEEEECCCCBSSSCSCTTSEEECGGGCBHHHHT----TTSCCCBTTTBCTTCTTEEE
T ss_pred cCeEEeCCC-e-eecCEEEECCccccccccCCCceEECCCCccHHHhh----ccccceeeccccCCCCcEEE
Confidence 999999999 7 9999999999999753322111 111 112211 2356678888 999999996
No 2
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=100.00 E-value=2.6e-40 Score=336.35 Aligned_cols=362 Identities=19% Similarity=0.324 Sum_probs=272.8
Q ss_pred CccEEEEcCCHHHHHHHHHHH-hCCCceEEEeeCCCCCccccc-cCCcceecCCccccccCCCCC---CCCCCCCCCChh
Q 014821 3 KKQIAIVGAGVSGLLACKYLL-LKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPW---PDSVTTDFPDHN 77 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~-~~~~~v~iie~~~~~gg~~~~-~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~ 77 (418)
.+||+|||||++|+++|..|+ +.|++++|||+++.+||.|.. .||+..+..|+..+.+...+. ...+...++++.
T Consensus 8 ~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GGtw~~~~ypg~~~d~~s~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (540)
T 3gwf_A 8 TVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGGTWYWNRYPGALSDTESHLYRFSFDRDLLQESTWKTTYITQP 87 (540)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCTHHHHCCCTTCEEEEEGGGSSCCSCHHHHHHCCCSBSEEEHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCCcccccCCCCceecCCcceeeeccccccccCCCCcccCCCHH
Confidence 479999999999999999999 899999999999999999997 899999999988887763210 012245678889
Q ss_pred HHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEe
Q 014821 78 QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILC 157 (418)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlA 157 (418)
++.+|++..++++++...++++++|++++..+ ..+.|.|++.++ .++.||+||+|
T Consensus 88 ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~--------------------~~~~~~V~~~~G-----~~i~ad~lV~A 142 (540)
T 3gwf_A 88 EILEYLEDVVDRFDLRRHFKFGTEVTSALYLD--------------------DENLWEVTTDHG-----EVYRAKYVVNA 142 (540)
T ss_dssp HHHHHHHHHHHHTTCGGGEEESCCEEEEEEET--------------------TTTEEEEEETTS-----CEEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCcceeEeccEEEEEEEeC--------------------CCCEEEEEEcCC-----CEEEeCEEEEC
Confidence 99999999999999877799999999999876 135799998776 47999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEe
Q 014821 158 VGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (418)
Q Consensus 158 tG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r 237 (418)
||.. +.|.+|+++ |++.|.+..+|+..+.. .....+|+|+|||+|.+|+|+|.+|+..+.+ |+++.|
T Consensus 143 tG~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~------~~~~~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r 209 (540)
T 3gwf_A 143 VGLL-SAINFPNLP---GLDTFEGETIHTAAWPE------GKSLAGRRVGVIGTGSTGQQVITSLAPEVEH---LTVFVR 209 (540)
T ss_dssp CCSC-CSBCCCCCT---TGGGCCSEEEEGGGCCS------SCCCTTSEEEEECCSHHHHHHHHHHTTTCSE---EEEEES
T ss_pred Cccc-ccCCCCCCC---CccccCCCEEEeecCCC------ccccccceEEEECCCchHHHHHHHHHhhCCE---EEEEEC
Confidence 9988 589999998 99999999999998876 2346789999999999999999999988654 999999
Q ss_pred cCcccccCCCCCCCcchhhhhhHHHH-------HhhcC-----------C-----C---chhHHHHHHh-----------
Q 014821 238 TEHWNIPDYFPWGFPLAYLYLNRFAE-------LLVHK-----------P-----G---EGFLLSLLAT----------- 280 (418)
Q Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~~~-------~~~~~-----------~-----~---~~~~~~~~~~----------- 280 (418)
++.|++|... .++.......+.. ..... + . .......+..
T Consensus 210 ~~~~i~p~~~---~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~g~~~~~~~~ 286 (540)
T 3gwf_A 210 TPQYSVPVGN---RPVNPEQIAEIKADYDRIWERAKNSAVAFGFEESTLPAMSVSEEERNRIFQEAWDHGGGFRFMFGTF 286 (540)
T ss_dssp SCCCEEECCC---CBCCHHHHHHHHHTHHHHHHHHHTSSSCSSSCCCCCCGGGSCHHHHHHHHHHHHHHCCHHHHHHTSC
T ss_pred CCCccccCcc---CCCCHHHHHHHHhccHHHHHHHHhccccccccccchhhhhCCHHHHHHHHHHHHhcccchhhhhhhh
Confidence 9999999865 4444433222221 00000 0 0 0001111110
Q ss_pred ----hhhHHHHHHHHHHHHHHHhhh--hhcccCCCCCcccccccccccccccCcchhhhhccCcEEEe---ccCceeEec
Q 014821 281 ----MLSPLRWAISKFVEADIKKKH--RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFCE 351 (418)
Q Consensus 281 ----~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~v~~~~~ 351 (418)
..........+++...++.+. +.....+.|. .. +|+++++++++++.+.+++|+++ ...|.++++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~v~dp~~~~~l~P~-~~-----g~kR~~~~~~y~~~l~~~nV~lv~~~~~~I~~it~ 360 (540)
T 3gwf_A 287 GDIATDEAANEAAASFIRAKVAEIIEDPETARKLMPK-GL-----FAKRPLCDSGYYEVYNRPNVEAVAIKENPIREVTA 360 (540)
T ss_dssp SCTTTCHHHHHHHHHHHHHHHHHHCCSHHHHHHHCCC-SC-----CCSSCEEESSTGGGGGSTTEEEEETTTSCEEEECS
T ss_pred hhhhcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCC-CC-----CccccCCCccHHHHhcCCCEEEEeCCCCCccEEec
Confidence 012233444555555444432 2334567776 44 89999999999999999999999 677999999
Q ss_pred CcEEEcCCceeeeccEEEEccCCCCCcchhcccc---ch--hhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 352 DGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFL---SQ--TFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 352 ~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
++|+++||++ +++|+||+||||+++......+. .. -+++.. .+.+..|..+ ++++||+|+
T Consensus 361 ~gv~~~dG~~-~~~DvIV~ATGf~~~~~~~~~~~i~g~~G~~l~~~w----~~~~~~y~g~~v~gfPN~f~ 426 (540)
T 3gwf_A 361 KGVVTEDGVL-HELDVLVFATGFDAVDGNYRRIEIRGRDGLHINDHW----DGQPTSYLGVSTANFPNWFM 426 (540)
T ss_dssp SEEEETTCCE-EECSEEEECCCBSCSSHHHHTSEEECGGGCBHHHHT----SSSCCCBTTTBCTTCTTEEE
T ss_pred CeEEcCCCCE-EECCEEEECCccCccccCcCcceEECCCCcCHHHhh----ccChhhccccccCCCCceEE
Confidence 9999999999 99999999999998853222111 11 111111 2456788888 999999996
No 3
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=100.00 E-value=3.5e-40 Score=336.03 Aligned_cols=363 Identities=21% Similarity=0.322 Sum_probs=271.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-cCCcceecCCccccccCCCCC---CCCCCCCCCChhH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPW---PDSVTTDFPDHNQ 78 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 78 (418)
.+||+|||||++|+++|..|++.|++++|||+++.+||.|.. .||+..+.+|...|.+...+. ...+...++++.+
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GGtw~~~~ypg~~~dv~s~~y~~~f~~~~~~~~~~~~~~~~~~e 100 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGGVWYWNRYPGARCDVESIDYSYSFSPELEQEWNWSEKYATQPE 100 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCSSSSCBHHH
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCCccccCCCCCceeCCCchhcccccccccccCCCCccCCCCHHH
Confidence 479999999999999999999999999999999999999985 899999999998888764320 1123567889999
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+.+|++..++++++.+.++++++|++++..+ ..+.|+|++.++ .++.||+||+||
T Consensus 101 i~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~--------------------~~~~w~V~~~~G-----~~i~ad~lV~At 155 (549)
T 4ap3_A 101 ILAYLEHVADRFDLRRDIRFDTRVTSAVLDE--------------------EGLRWTVRTDRG-----DEVSARFLVVAA 155 (549)
T ss_dssp HHHHHHHHHHHTTCGGGEECSCCEEEEEEET--------------------TTTEEEEEETTC-----CEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCccEEECCEEEEEEEcC--------------------CCCEEEEEECCC-----CEEEeCEEEECc
Confidence 9999999999999877899999999999876 235799998776 479999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|.. +.|.+|+++ |++.|.+.++|+..|... .....+|+|+|||+|.+|+|+|.+|+..+.. |+++.|+
T Consensus 156 G~~-s~p~~p~ip---G~~~f~g~~~~~~~~~~~-----~~~~~~krV~VIG~G~sgve~a~~l~~~~~~---Vtv~~r~ 223 (549)
T 4ap3_A 156 GPL-SNANTPAFD---GLDRFTGDIVHTARWPHD-----GVDFTGKRVGVIGTGSSGIQSIPIIAEQAEQ---LFVFQRS 223 (549)
T ss_dssp CSE-EECCCCCCT---TGGGCCSEEEEGGGCCTT-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESS
T ss_pred CCC-CCCCCCCCC---CcccCCCceEEecccccc-----ccccCCCEEEEECCCchHHHHHHHHHhhCCE---EEEEECC
Confidence 977 578899888 999999999999988721 1235789999999999999999999998765 9999999
Q ss_pred CcccccCCCCCCCcchhhhhhHHH-------HHhhc----------------CCC---chhHHHHHH-----------hh
Q 014821 239 EHWNIPDYFPWGFPLAYLYLNRFA-------ELLVH----------------KPG---EGFLLSLLA-----------TM 281 (418)
Q Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~~-------~~~~~----------------~~~---~~~~~~~~~-----------~~ 281 (418)
+.|++|... .++.......+. ..... .+. .......+. ..
T Consensus 224 ~~~ilp~~~---~~~~~~~~~~l~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~e~r~~~~e~~~~~~~~~~~~~~~~~ 300 (549)
T 4ap3_A 224 ANYSIPAGN---VPLDDATRAEQKANYAERRRLSRESGGGSPHRPHPKSALEVSEEERRAVYEERWKLGGVLFSKAFPDQ 300 (549)
T ss_dssp CCCEEECC-------CHHHHHHHHHTHHHHHHHHHHSSSSSSCCCCSSCTTSSCHHHHHHHHHHHHHHCHHHHTTSSTTT
T ss_pred CCccccCcC---CCCCHHHHHHHHhccHHHHHHHHhhccccccccCccchhcCCHHHHHHHHHHHHhhcchHHHhhhhhh
Confidence 999998765 344333222221 11000 000 000111110 00
Q ss_pred --hhHHHHHHHHHHHHHHHhhh--hhcccCCCCC-cccccccccccccccCcchhhhhccCcEEEe---ccCceeEecCc
Q 014821 282 --LSPLRWAISKFVEADIKKKH--RLAKFGMVPK-HSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFCEDG 353 (418)
Q Consensus 282 --~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~v~~~~~~~ 353 (418)
.....+...+++...++.+. +.....|.|. +.. +|++++++.++++.+.+++|+++ ...|.++++++
T Consensus 301 ~~~~~~~~~~~~~~~~~~~~~v~d~~~~~~l~P~~~~~-----~~kR~~~~~~y~~al~~~~V~lvd~~~~~I~~it~~g 375 (549)
T 4ap3_A 301 LTDPAANDTARAFWEEKIRAVVDDPAVAELLTPKDHAI-----GAKRIVLDSGYYETYNRDNVELVDLRSTPIVGMDETG 375 (549)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCSCHHHHHHHSCSSCCB-----TTBCCEEESSTGGGGGSTTEEEEETTTSCEEEEETTE
T ss_pred hcCHHHHHHHHHHHHHHHHHHcCCHHHHHhCCCCCCCC-----CccccCCCccHHHHhcCCCEEEEeCCCCCceEEeCCc
Confidence 12334455555555555442 3444567887 666 89999999999999999999999 77899999999
Q ss_pred EEEcCCceeeeccEEEEccCCCCCcchhcccc---ch--hhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 354 IVVDGQTTPLKTDLVILATGFKGDVKLKNIFL---SQ--TFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 354 v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
|+++|| + +++|+||+||||+++.....-+. .. -|++.. .+....|..+ ++++||+|+
T Consensus 376 v~~~dG-~-~~~D~iI~ATGf~~~~~~~~~~~i~g~~G~~l~~~w----~~~~~~y~g~~~~gfPN~f~ 438 (549)
T 4ap3_A 376 IVTTGA-H-YDLDMIVLATGFDAMTGSLDKLEIVGRGGRTLKETW----AAGPRTYLGLGIDGFPNFFN 438 (549)
T ss_dssp EEESSC-E-EECSEEEECCCEEESSTTGGGSEEECGGGCBHHHHT----TTSCCCBTTTBCTTCTTEEE
T ss_pred EEeCCC-c-eecCEEEECCcccccccccCceeEECCCCcCHHHhh----ccchhhccccccCCCCcEEE
Confidence 999999 7 99999999999998752221111 11 111111 2356788888 999999996
No 4
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=100.00 E-value=8.8e-37 Score=311.62 Aligned_cols=363 Identities=21% Similarity=0.329 Sum_probs=262.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-cCCcceecCCccccccCCCCC---CCCCCCCCCChhH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPW---PDSVTTDFPDHNQ 78 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 78 (418)
.+||+|||||++|+++|..|++.|++++|||+++.+||.|.. +||+..+..+...+.+...+. ...+...++++.+
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG~w~~~~~pg~~~d~~~~~~~~~f~~~~~~~~~~~~~~~~~~~ 95 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGGVWYWNRYPGARCDIESIEYCYSFSEEVLQEWNWTERYASQPE 95 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTHHHHCCCTTCBCSSCTTTSSCCSCHHHHHHCCCCBSSCBHHH
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccccCCCceeecccccccccccChhhhhccCcccccCCHHH
Confidence 479999999999999999999999999999999999999987 899999988887776653220 0112356788999
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+.+|++.+++++++...++++++|++++..+ ..+.|+|++.++ .++.||+||+|+
T Consensus 96 i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~--------------------~~~~w~V~~~~G-----~~~~ad~vV~At 150 (542)
T 1w4x_A 96 ILRYINFVADKFDLRSGITFHTTVTAAAFDE--------------------ATNTWTVDTNHG-----DRIRARYLIMAS 150 (542)
T ss_dssp HHHHHHHHHHHTTGGGGEECSCCEEEEEEET--------------------TTTEEEEEETTC-----CEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCceEEcCcEEEEEEEcC--------------------CCCeEEEEECCC-----CEEEeCEEEECc
Confidence 9999999999998765799999999999865 135699988765 479999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|.. +.|.+|+++ |++.+.+.++|+..|..- .....+|+|+|||+|.+|+|+|..|+..+.. |+++.|+
T Consensus 151 G~~-s~p~~p~i~---G~~~f~G~~~hs~~~~~~-----~~~~~gk~V~VIG~G~sg~e~a~~l~~~~~~---vtv~~r~ 218 (542)
T 1w4x_A 151 GQL-SVPQLPNFP---GLKDFAGNLYHTGNWPHE-----PVDFSGQRVGVIGTGSSGIQVSPQIAKQAAE---LFVFQRT 218 (542)
T ss_dssp CSC-CCCCCCCCT---TGGGCCSEEEEGGGCCSS-----CCCCBTCEEEEECCSHHHHHHHHHHHHHBSE---EEEEESS
T ss_pred CCC-CCCCCCCCC---CcccCCCceEECCCCCCc-----hhccCCCEEEEECCCccHHHHHHHHhhcCce---EEEEEcC
Confidence 998 589999998 998899999999988621 1235789999999999999999999998765 9999999
Q ss_pred CcccccCCCCCCCcchhhhhhHH-------HHHhhcC-----------CC--------chhHHHHHH-----------hh
Q 014821 239 EHWNIPDYFPWGFPLAYLYLNRF-------AELLVHK-----------PG--------EGFLLSLLA-----------TM 281 (418)
Q Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~-------~~~~~~~-----------~~--------~~~~~~~~~-----------~~ 281 (418)
+.|+.|... .++.......+ ....... |. ..+....+. .+
T Consensus 219 ~~~~~p~~~---~~~~~~~~~~~~~~~p~l~~~~~~~~~G~~~~~d~~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~~~~ 295 (542)
T 1w4x_A 219 PHFAVPARN---APLDPEFLADLKKRYAEFREESRNTPGGTHRYQGPKSALEVSDEELVETLERYWQEGGPDILAAYRDI 295 (542)
T ss_dssp CCCEEECCC---CBCCHHHHHHHHTTHHHHHHHHHTSSSSSCCCCCCSCTTTSCHHHHHHHHHHHHHHCSGGGGGSSTTT
T ss_pred CcccccCCC---CCCCHHHHHHHHhhCHHHHHHHHhhccccccCccccchhcCCHHHHHHHHHHHHhhcchHHHHHHHHH
Confidence 998877654 22222211111 1110000 00 001111110 00
Q ss_pred --hhHHHHHHHHHHHHHHHhhh--hhcccCCCC-CcccccccccccccccCcchhhhhccCcEEEe---ccCceeEecCc
Q 014821 282 --LSPLRWAISKFVEADIKKKH--RLAKFGMVP-KHSFLQELSSCLTITVPEKFYDKVEEGSIILK---KSQDFSFCEDG 353 (418)
Q Consensus 282 --~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~---~~~v~~~~~~~ 353 (418)
.......+.+++...++.+. +.....|.| .+.. +|+++++++++++.+.+++|+++ ...|.++++++
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~P~~~~~-----~~kr~~~~~~y~~~~~~~~v~lv~~~~~~i~~i~~~g 370 (542)
T 1w4x_A 296 LRDRDANERVAEFIRNKIRNTVRDPEVAERLVPKGYPF-----GTKRLILEIDYYEMFNRDNVHLVDTLSAPIETITPRG 370 (542)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHCSSHHHHHHHSCCSSCS-----SSSCCEEESSHHHHTTSTTEEEEETTTSCEEEECSSE
T ss_pred hcChHHHHHHHHHHHHHHHHHcCCHHHHHhcCCCCCCc-----cccCCCCCccHHHHhCCCCEEEEecCCCCceEEcCCe
Confidence 01123344455555554432 233455777 4544 89999999999999999999998 56699999999
Q ss_pred EEEcCCceeeeccEEEEccCCCCCcchhcccc---ch--hhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 354 IVVDGQTTPLKTDLVILATGFKGDVKLKNIFL---SQ--TFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 354 v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~---~~--~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
|+++| ++ +++|+||+||||+++..+...+. .. .+.+.. ......|..+ ++++||+|+
T Consensus 371 v~~~d-~~-~~~D~ii~atG~~~~~~~~~~~~i~g~~G~~l~~~w----~~~~~~y~~~~v~~~Pn~f~ 433 (542)
T 1w4x_A 371 VRTSE-RE-YELDSLVLATGFDALTGALFKIDIRGVGNVALKEKW----AAGPRTYLGLSTAGFPNLFF 433 (542)
T ss_dssp EEESS-CE-EECSEEEECCCCCCTTHHHHTSEEECGGGCBHHHHT----TTSCCCBTTTBCTTSTTEEE
T ss_pred EEeCC-eE-EecCEEEEcCCccccccCcCceeeECCCCCCHHHhh----cCchheecccccCCCCceEE
Confidence 99999 77 99999999999998644333221 00 011111 1234567777 999999985
No 5
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=100.00 E-value=5.5e-35 Score=292.67 Aligned_cols=284 Identities=26% Similarity=0.407 Sum_probs=221.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHh---CCCc---eEEEeeCCCCCccccc----------------cCCcceecCCcccc
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLL---KGFH---PIVFEARSDIGGAWIK----------------TVETTMLQTPKQLY 58 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~---~~~~---v~iie~~~~~gg~~~~----------------~~~~~~l~~~~~~~ 58 (418)
|. +||+|||||++|+++|..|++ .|++ ++|||+++.+||.|.. .|+.+..+.+...+
T Consensus 1 M~-~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~ 79 (464)
T 2xve_A 1 MA-TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECL 79 (464)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGT
T ss_pred CC-CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhc
Confidence 44 799999999999999999999 9999 9999999999999986 24445566677777
Q ss_pred ccCCCCCCCC---CCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE
Q 014821 59 QFSDYPWPDS---VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (418)
Q Consensus 59 ~~~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (418)
.|.+++++.. +...++++.++.+|++++++++++.+.++++++|++++... ..+.|.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~--------------------~~~~~~ 139 (464)
T 2xve_A 80 EFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNE--------------------DSQTFT 139 (464)
T ss_dssp CBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEET--------------------TTTEEE
T ss_pred ccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcC--------------------CCCcEE
Confidence 7777765421 13677889999999999999999844489999999999876 124799
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCH
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSA 215 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa 215 (418)
|++.+..++...++.||+||+|||.+ +.|.+|.++ |.+.|.+.++|+..++.. ....+++|+|||+|.+|
T Consensus 140 V~~~~~~~g~~~~~~~d~VVvAtG~~-s~p~~p~ip---G~~~~~g~~~hs~~~~~~------~~~~~k~VvVVG~G~sg 209 (464)
T 2xve_A 140 VTVQDHTTDTIYSEEFDYVVCCTGHF-STPYVPEFE---GFEKFGGRILHAHDFRDA------LEFKDKTVLLVGSSYSA 209 (464)
T ss_dssp EEEEETTTTEEEEEEESEEEECCCSS-SSBCCCCCB---TTTTCCSEEEEGGGCCCG------GGGTTSEEEEECCSTTH
T ss_pred EEEEEcCCCceEEEEcCEEEECCCCC-CCCccCCCC---CcccCCceEEehhhhCCH------hHcCCCEEEEEcCCCCH
Confidence 99887544555689999999999987 589999998 888888889999988763 34578999999999999
Q ss_pred HHHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHH
Q 014821 216 LDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEA 295 (418)
Q Consensus 216 ~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (418)
+|+|..|...+.. |++++|++.. .+..
T Consensus 210 ~eiA~~l~~~g~~---V~li~~~~~~-~~~~------------------------------------------------- 236 (464)
T 2xve_A 210 EDIGSQCYKYGAK---KLISCYRTAP-MGYK------------------------------------------------- 236 (464)
T ss_dssp HHHHHHHHHTTCS---EEEEECSSCC-CCCC-------------------------------------------------
T ss_pred HHHHHHHHHhCCe---EEEEEECCCC-CCCC-------------------------------------------------
Confidence 9999999998765 9999987641 1100
Q ss_pred HHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccCceeEecCcEEEcCCceeeeccEEEEccCCC
Q 014821 296 DIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCEDGIVVDGQTTPLKTDLVILATGFK 375 (418)
Q Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~~v~~~~g~~~~~~D~Vi~atG~~ 375 (418)
...+|+++ ..|.++++++|+++||++ +++|.||+|||++
T Consensus 237 ---------------------------------------~~~~V~~~-~~V~~i~~~~V~~~dG~~-i~~D~Vi~atG~~ 275 (464)
T 2xve_A 237 ---------------------------------------WPENWDER-PNLVRVDTENAYFADGSS-EKVDAIILCTGYI 275 (464)
T ss_dssp ---------------------------------------CCTTEEEC-SCEEEECSSEEEETTSCE-EECSEEEECCCBC
T ss_pred ---------------------------------------CCCceEEc-CCeEEEeCCEEEECCCCE-EeCCEEEECCCCC
Confidence 01245665 457788888999999998 9999999999999
Q ss_pred CCcchhccccchhhhhhhcCCCCC-Cc-cceeee-eeccCcccc
Q 014821 376 GDVKLKNIFLSQTFQDYLAGSPTE-KL-PLYRSA-HIYIDTLTY 416 (418)
Q Consensus 376 ~~~~~~~~l~~~~~~~~~~~~~~~-~~-~~~~~~-~~~~~~~~~ 416 (418)
++.++++. ...+...++ .+ +++.++ .++.|+||+
T Consensus 276 p~~~~l~~-------~~gl~~~~~~~v~~~~~~~~~t~~p~i~a 312 (464)
T 2xve_A 276 HHFPFLND-------DLRLVTNNRLWPLNLYKGVVWEDNPKFFY 312 (464)
T ss_dssp CCCTTBCT-------TTCCCCCSSSCCSSEETTTEESSSTTEEE
T ss_pred CCCCCcCc-------ccccccCCCcccccccceEecCCCCCEEE
Confidence 99543331 012222222 44 567765 889999996
No 6
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=4.4e-35 Score=282.81 Aligned_cols=316 Identities=22% Similarity=0.314 Sum_probs=239.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
|+++||+|||||++|+++|..|+++|++++|||+++.+||.|...++...+..+...+.+..++.+.. ...++++.++.
T Consensus 1 m~~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 79 (357)
T 4a9w_A 1 MDSVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLFSPAGWSSIPGWPMPAS-QGPYPARAEVL 79 (357)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCSSCGGGSCCSSSCCCCC-SSSSCBHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEecCchhhhhCCCCCCCCC-ccCCCCHHHHH
Confidence 78899999999999999999999999999999999999999999999999999998888888777643 56788889999
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE-EEEecCCCCceeEEEeCEEEEeec
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
+|+.++++++++ .++++++|++++..+ +.|. |.+.++ ++.||+||+|||
T Consensus 80 ~~l~~~~~~~~~--~~~~~~~v~~i~~~~----------------------~~~~~v~~~~g------~~~~d~vV~AtG 129 (357)
T 4a9w_A 80 AYLAQYEQKYAL--PVLRPIRVQRVSHFG----------------------ERLRVVARDGR------QWLARAVISATG 129 (357)
T ss_dssp HHHHHHHHHTTC--CEECSCCEEEEEEET----------------------TEEEEEETTSC------EEEEEEEEECCC
T ss_pred HHHHHHHHHcCC--EEEcCCEEEEEEECC----------------------CcEEEEEeCCC------EEEeCEEEECCC
Confidence 999999999999 799999999999876 5677 765443 799999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 160 RFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 160 ~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.. +.|.+|.++ |.+.+.+..+|+..+... ....+++|+|||+|.+|+|+|..|...+ +|++++|+.
T Consensus 130 ~~-~~~~~~~~~---g~~~~~~~~~~~~~~~~~------~~~~~~~v~VvG~G~~g~e~a~~l~~~~----~v~~v~~~~ 195 (357)
T 4a9w_A 130 TW-GEAYTPEYQ---GLESFAGIQLHSAHYSTP------APFAGMRVAIIGGGNSGAQILAEVSTVA----ETTWITQHE 195 (357)
T ss_dssp SG-GGBCCCCCT---TGGGCCSEEEEGGGCCCS------GGGTTSEEEEECCSHHHHHHHHHHTTTS----EEEEECSSC
T ss_pred CC-CCCCCCCCC---CccccCCcEEEeccCCCh------hhcCCCEEEEECCCcCHHHHHHHHHhhC----CEEEEECCC
Confidence 87 578888888 888888889998888763 3457899999999999999999998875 399999986
Q ss_pred cccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccc
Q 014821 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (418)
Q Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 319 (418)
.++.|... .+..+......+ +... ....+.+... .
T Consensus 196 ~~~~~~~~-~~~~~~~~~~~~------------------------------------~~~~---~~~~~~~~~~-----~ 230 (357)
T 4a9w_A 196 PAFLADDV-DGRVLFERATER------------------------------------WKAQ---QEGREPDLPP-----G 230 (357)
T ss_dssp CCBCCTTC-CTHHHHTC---------------------------------------------------------------
T ss_pred Ceecchhh-cCccHHHHHHHH------------------------------------Hhcc---ccccCCCccc-----c
Confidence 55666432 000000000000 0000 0000000000 0
Q ss_pred cccccccCcchhhhhccCcEEEeccCceeEecCcEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcCCCCC
Q 014821 320 SCLTITVPEKFYDKVEEGSIILKKSQDFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTE 399 (418)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~ 399 (418)
....+.+.+.+.+.++.+.+... ..+.+++.+++.+++|++ +++|.||+|||++++.+ ++....+.+.++
T Consensus 231 ~~~~~~~~~~~~~~~~~g~i~~~-~~v~~~~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~--------~l~~~gl~~~~G 300 (357)
T 4a9w_A 231 GFGDIVMVPPVLDARARGVLAAV-PPPARFSPTGMQWADGTE-RAFDAVIWCTGFRPALS--------HLKGLDLVTPQG 300 (357)
T ss_dssp ---CBCCCHHHHHHHHTTCCCEE-CCCSEEETTEEECTTSCE-EECSEEEECCCBCCCCG--------GGTTTTCBCTTS
T ss_pred cccCcccChhHHHHHhcCceEEe-cCcceEeCCeeEECCCCE-ecCCEEEECCCcCCCCc--------ccCcccccCCCC
Confidence 11123344556667777765433 347788899999999999 99999999999999954 444444446678
Q ss_pred Cccceee--eeeccCcccc
Q 014821 400 KLPLYRS--AHIYIDTLTY 416 (418)
Q Consensus 400 ~~~~~~~--~~~~~~~~~~ 416 (418)
.+.++.. +.++.||||.
T Consensus 301 ~i~vd~~~l~~t~~~~vya 319 (357)
T 4a9w_A 301 QVEVDGSGLRALAVPSVWL 319 (357)
T ss_dssp CBCBCTTSCBBSSCTTEEE
T ss_pred CccccCCcccCCCCCCeEE
Confidence 8999888 6899999996
No 7
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=100.00 E-value=2.1e-33 Score=283.70 Aligned_cols=369 Identities=16% Similarity=0.169 Sum_probs=221.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC--------------CceEEEeeCCCCCccccc--cCCcceecCC-----------c
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG--------------FHPIVFEARSDIGGAWIK--TVETTMLQTP-----------K 55 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~--------------~~v~iie~~~~~gg~~~~--~~~~~~l~~~-----------~ 55 (418)
.+||+|||+|++||++|++|.+.+ ...+.+|+.+.++ |+. .+|+..++++ .
T Consensus 39 i~Dvi~IGaGp~gLa~A~~L~~~~~~~~~~~~~~~~~~~~~~f~e~~~~f~--Wh~g~~~p~~~~q~~fl~Dlvtl~~P~ 116 (501)
T 4b63_A 39 LHDLLCVGFGPASLAIAIALHDALDPRLNKSASNIHAQPKICFLERQKQFA--WHSGMLVPGSKMQISFIKDLATLRDPR 116 (501)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHCTTTCTTC----CCCCEEEEESSSSCC--SSGGGCCTTCBCSSCGGGSSSTTTCTT
T ss_pred cCcEEEEcccHHHHHHHHHHHhcCCCceEEeccccCCCcceeeEeccCCCC--cCCCCCCCCccccccchhhhccccCCC
Confidence 479999999999999999998743 3567889887776 776 6888888764 2
Q ss_pred cccccCCC--------CCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCC
Q 014821 56 QLYQFSDY--------PWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQP 127 (418)
Q Consensus 56 ~~~~~~~~--------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (418)
..|+|..+ ++. .+...||++.++.+||++++++++. .++|+++|+++++.. +.. .
T Consensus 117 s~~sf~~yl~~~~rl~~f~-~~~~~~p~r~E~~~Yl~~~A~~~~~--~vrf~~~V~~v~~~~--~~~------------~ 179 (501)
T 4b63_A 117 SSFTFLNYLHQKGRLIHFT-NLSTFLPARLEFEDYMRWCAQQFSD--VVAYGEEVVEVIPGK--SDP------------S 179 (501)
T ss_dssp CTTSHHHHHHHHTCHHHHH-TTCCSCCBHHHHHHHHHHHHHTTGG--GEEESEEEEEEEEEC--SST------------T
T ss_pred CccchHHHHHHhCCccCCc-cccCCCCCHHHHHHHHHHHHHHcCC--ceEcceEEEeecccc--ccc------------c
Confidence 22332211 111 1257899999999999999999886 899999999999866 100 0
Q ss_pred CCCCCceEEEEecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEE
Q 014821 128 FGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVT 207 (418)
Q Consensus 128 ~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 207 (418)
....+.|+|++.++.++...++.|++||+||| ..|.+|+. ..+.+.++|++.|....+.......++|+|+
T Consensus 180 ~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG---~~P~iP~~------~~~~g~v~Hss~y~~~~~~~~~~~~~gKrV~ 250 (501)
T 4b63_A 180 SSVVDFFTVRSRNVETGEISARRTRKVVIAIG---GTAKMPSG------LPQDPRIIHSSKYCTTLPALLKDKSKPYNIA 250 (501)
T ss_dssp SSCBCEEEEEEEETTTCCEEEEEEEEEEECCC---CEECCCTT------SCCCTTEEEGGGHHHHHHHHSCCTTSCCEEE
T ss_pred ccccceEEEEEecCCCceEEEEEeCEEEECcC---CCCCCCCC------CCCCcceeeccccccchhhccccccCCcEEE
Confidence 00124699999998888889999999999999 45777743 3456789999998764433334567899999
Q ss_pred EEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhh-hHHHHHhhcCCCchhHHHHHH---hhhh
Q 014821 208 VVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYL-NRFAELLVHKPGEGFLLSLLA---TMLS 283 (418)
Q Consensus 208 VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~---~~~~ 283 (418)
|||+|.||+|++.+|+..... .+|++++|++.+..... .|+...++ ....+.+...|.......... ....
T Consensus 251 VVG~G~SA~ei~~~L~~~~~~-~~v~~~~R~~~~~p~~~----s~~~~~~f~p~~~~~f~~l~~~~r~~~~~~~~~~~~~ 325 (501)
T 4b63_A 251 VLGSGQSAAEIFHDLQKRYPN-SRTTLIMRDSAMRPSDD----SPFVNEIFNPERVDKFYSQSAAERQRSLLADKATNYS 325 (501)
T ss_dssp EECCSHHHHHHHHHHHHHSTT-CEEEEECSSSSCCBCCC----CTTGGGGGSTTHHHHHHTSCHHHHHHHHHHTGGGTSS
T ss_pred EECCcHHHHHHHHHHHhcCCC-ceEEEEeCCCccccccc----cccchhhcCHHHHHHHHhCCHHHHHHHHHHHHhhhhc
Confidence 999999999999999876433 46999999987654433 23333222 233344444443222111111 1111
Q ss_pred HH-HHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccCceeEecCcEEEcCCcee
Q 014821 284 PL-RWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCEDGIVVDGQTTP 362 (418)
Q Consensus 284 ~~-~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~~v~~~~g~~~ 362 (418)
.+ ...+.......+++...... ...+..+.. ..+ ... ........+++++... +.+++.+++.+++|++
T Consensus 326 ~v~~~li~~i~~~~y~~~~~~~~-~~~~~~~l~---~~~--~v~--~~~~~~~~~~~~v~~~-~~~~~~~~v~~~dg~~- 395 (501)
T 4b63_A 326 VVRLELIEEIYNDMYLQRVKNPD-ETQWQHRIL---PER--KIT--RVEHHGPQSRMRIHLK-SSKPESEGAANDVKET- 395 (501)
T ss_dssp CBCHHHHHHHHHHHHHHHHHCSC-GGGCSSEEE---CSE--EEE--EEECCSSSSCEEEEEE-ESCC--------CCCE-
T ss_pred ccCHHHHHHHHHHHHhhccCCCc-ccccceeec---CCc--cee--eeeecCCCCeEEEEee-eeEEeCCeeEeCCCeE-
Confidence 11 11222222222222211100 000000000 000 000 0011223455555432 3466778899999999
Q ss_pred eeccEEEEccCCCCCcchhccccchhhhhhhcCCCCCCccceeee-e-------eccCcccccC
Q 014821 363 LKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYRSA-H-------IYIDTLTYQE 418 (418)
Q Consensus 363 ~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~-------~~~~~~~~~~ 418 (418)
+++|+||+||||+++.. ++| .+.++ .+..+..+++.+.+.. + ..-++||+|.
T Consensus 396 ~~~D~VI~ATGy~~~~p--~~L-~~~~~-~l~~d~~g~~~v~rdy~~~~~~~~~~~~~~i~~qg 455 (501)
T 4b63_A 396 LEVDALMVATGYNRNAH--ERL-LSKVQ-HLRPTGQDQWKPHRDYRVEMDPSKVSSEAGIWLQG 455 (501)
T ss_dssp EEESEEEECCCEECCTH--HHH-TGGGG-GGSSTTCCSCCBCTTSBBCCCTTTBCTTCEEEECS
T ss_pred EECCEEEECcCCCCCCc--chh-cchhh-hcCcCcCCCeeeCCCcEEeecCCccCCCceEEecC
Confidence 99999999999998842 111 11122 3444666777665543 2 2346788873
No 8
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=100.00 E-value=1e-32 Score=275.41 Aligned_cols=280 Identities=28% Similarity=0.402 Sum_probs=209.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccccC-Cc------------------------------
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTV-ET------------------------------ 48 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~~~-~~------------------------------ 48 (418)
..+||+|||||++|+++|..|++.|. +|+|||+++.+||.|.... ..
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 46899999999999999999999999 9999999999999998731 11
Q ss_pred ---ceecCCccccccCCCCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCC
Q 014821 49 ---TMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNG 125 (418)
Q Consensus 49 ---~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~ 125 (418)
+..+.+...+.|.+++++.. ...|+++.++.+|+++++++++. .++++++|++++...
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~~~~~~~~--~i~~~t~V~~v~~~~---------------- 145 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKPQ-TLQFPHRHTIQEYQRIYAQPLLP--FIKLATDVLDIEKKD---------------- 145 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCTT-CCSSCBHHHHHHHHHHHHGGGGG--GEECSEEEEEEEEET----------------
T ss_pred hhhhccCCCHHHhccCCCCCCCC-CCCCCCHHHHHHHHHHHHHHhhC--eEEeCCEEEEEEeCC----------------
Confidence 11222334455666666643 46788899999999999998866 789999999998766
Q ss_pred CCCCCCCceEEEEecCCCCc-eeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCC----CceEEeccCCCCchhhhhhhh
Q 014821 126 QPFGSRGKWTVAVEDAKNHS-TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAF----HGKVIHSMDYSDMDYEAAANL 200 (418)
Q Consensus 126 ~~~~~~~~~~v~~~~~~~~~-~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~----~~~~~~~~~~~~~~~~~~~~~ 200 (418)
+.|.|++.+..+|. ..++.||+||+|||.+ +.|.+|.++ |.+.+ .+.++|+..++.. ..
T Consensus 146 ------~~~~V~~~~~~~G~~~~~~~~d~VVvAtG~~-s~p~~p~i~---G~~~~~~~~~g~v~~~~~~~~~------~~ 209 (447)
T 2gv8_A 146 ------GSWVVTYKGTKAGSPISKDIFDAVSICNGHY-EVPYIPNIK---GLDEYAKAVPGSVLHSSLFREP------EL 209 (447)
T ss_dssp ------TEEEEEEEESSTTCCEEEEEESEEEECCCSS-SSBCBCCCB---THHHHHHHSTTSEEEGGGCCCG------GG
T ss_pred ------CeEEEEEeecCCCCeeEEEEeCEEEECCCCC-CCCCCCCCC---ChhhhhccCCccEEEecccCCh------hh
Confidence 56999887632233 3479999999999998 588899888 87653 4678999888763 33
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHh
Q 014821 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLAT 280 (418)
Q Consensus 201 ~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (418)
..+++|+|||+|.+|+|+|..|...+. ++|++++|++.+
T Consensus 210 ~~~k~VvVvG~G~sg~e~A~~l~~~~~--~~V~l~~r~~~~--------------------------------------- 248 (447)
T 2gv8_A 210 FVGESVLVVGGASSANDLVRHLTPVAK--HPIYQSLLGGGD--------------------------------------- 248 (447)
T ss_dssp GTTCCEEEECSSHHHHHHHHHHTTTSC--SSEEEECTTCCS---------------------------------------
T ss_pred cCCCEEEEEccCcCHHHHHHHHHHHhC--CcEEEEeCCCCc---------------------------------------
Confidence 578999999999999999999988764 139999987642
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccCceeEe--cCcEEEcC
Q 014821 281 MLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFC--EDGIVVDG 358 (418)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~--~~~v~~~~ 358 (418)
++..+|.+. ..|.++. +.+|+++|
T Consensus 249 -----------------------------------------------------l~~~~i~~~-~~v~~~~~~~~~v~~~d 274 (447)
T 2gv8_A 249 -----------------------------------------------------IQNESLQQV-PEITKFDPTTREIYLKG 274 (447)
T ss_dssp -----------------------------------------------------CBCSSEEEE-CCEEEEETTTTEEEETT
T ss_pred -----------------------------------------------------CCCCCeEEe-cCeEEEecCCCEEEECC
Confidence 112234432 2366673 45799999
Q ss_pred CceeeeccEEEEccCCCCCcch-----hccccchhhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 359 QTTPLKTDLVILATGFKGDVKL-----KNIFLSQTFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 359 g~~~~~~D~Vi~atG~~~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
|++.+++|.||+|||++++.++ ++.+ ...+..+.....++|.++ .++.|+||+
T Consensus 275 G~~~~~~D~vi~atG~~~~~~~l~~~~l~~~-----~~~i~~~~~~~~~~~~~v~~~~~p~l~~ 333 (447)
T 2gv8_A 275 GKVLSNIDRVIYCTGYLYSVPFPSLAKLKSP-----ETKLIDDGSHVHNVYQHIFYIPDPTLAF 333 (447)
T ss_dssp TEEECCCSEEEECCCBCCCCCCHHHHSCCST-----TTCCCSSSSSCCSEETTTEETTCTTEEE
T ss_pred CCEeccCCEEEECCCCCcCCCCCcccccccc-----cCceecCCCcccccccccccCCCCcEEE
Confidence 9864799999999999999655 3322 112222223334567776 678899886
No 9
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.97 E-value=7.1e-29 Score=240.96 Aligned_cols=285 Identities=20% Similarity=0.272 Sum_probs=193.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCCCCCccccccCCcceecCCccc---cccCCCCCCCC-C------
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIKTVETTMLQTPKQL---YQFSDYPWPDS-V------ 69 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~~~gg~~~~~~~~~~l~~~~~~---~~~~~~~~~~~-~------ 69 (418)
|+++||+|||||++|+++|..|++.|. +|+|||+++ +|+.|.......++..+... +.+.++..... .
T Consensus 2 m~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 80 (369)
T 3d1c_A 2 MQHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHSFKHWPKSTRTITPSFTSNGFGMPDMNAISMDTSPAFTF 80 (369)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHHHHTSCTTCBCSSCCCCCGGGTCCCTTCSSTTCCHHHHH
T ss_pred CccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCccccCcccccccCcchhcccCCchhhhhccccccccccc
Confidence 778999999999999999999999999 999999987 99998774433333333221 11111111100 0
Q ss_pred CCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEE
Q 014821 70 TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVH 149 (418)
Q Consensus 70 ~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i 149 (418)
...++.+.++..|+.++++++++ .++++++|++++..+ +.|.|.+.++ ++
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~g------~~ 130 (369)
T 3d1c_A 81 NEEHISGETYAEYLQVVANHYEL--NIFENTVVTNISADD----------------------AYYTIATTTE------TY 130 (369)
T ss_dssp CCSSCBHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECS----------------------SSEEEEESSC------CE
T ss_pred cccCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEECC----------------------CeEEEEeCCC------EE
Confidence 13456778899999999999998 788999999999865 4588876543 58
Q ss_pred EeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCC
Q 014821 150 QVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLE 229 (418)
Q Consensus 150 ~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~ 229 (418)
.||+||+|||.. ..|.+| + +.++|+..+... ...++++|+|||+|.+|+|+|..|...+..
T Consensus 131 ~~d~vVlAtG~~-~~p~ip------~-----~~~~~~~~~~~~------~~~~~~~vvVvG~G~~g~e~a~~l~~~g~~- 191 (369)
T 3d1c_A 131 HADYIFVATGDY-NFPKKP------F-----KYGIHYSEIEDF------DNFNKGQYVVIGGNESGFDAAYQLAKNGSD- 191 (369)
T ss_dssp EEEEEEECCCST-TSBCCC------S-----SSCEEGGGCSCG------GGSCSSEEEEECCSHHHHHHHHHHHHTTCE-
T ss_pred EeCEEEECCCCC-CccCCC------C-----CceechhhcCCh------hhcCCCEEEEECCCcCHHHHHHHHHhcCCe-
Confidence 999999999987 344444 4 246777766552 234678999999999999999999988754
Q ss_pred CCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCC
Q 014821 230 NPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMV 309 (418)
Q Consensus 230 ~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 309 (418)
|+++.|++.+..+... ....+. .
T Consensus 192 --V~lv~~~~~~~~~~~d-~~~~~~----~-------------------------------------------------- 214 (369)
T 3d1c_A 192 --IALYTSTTGLNDPDAD-PSVRLS----P-------------------------------------------------- 214 (369)
T ss_dssp --EEEECC-----------CTTSCC----H--------------------------------------------------
T ss_pred --EEEEecCCCCCCCCCC-CCccCC----H--------------------------------------------------
Confidence 9999998865433211 000000 0
Q ss_pred CCcccccccccccccccCcchhhhhccCc-EEEeccC-ceeE--ecC--cEEEcCCceeee-ccEEEEccCCCCCcchhc
Q 014821 310 PKHSFLQELSSCLTITVPEKFYDKVEEGS-IILKKSQ-DFSF--CED--GIVVDGQTTPLK-TDLVILATGFKGDVKLKN 382 (418)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~-v~~~--~~~--~v~~~~g~~~~~-~D~Vi~atG~~~~~~~~~ 382 (418)
...+.+.+.+++.+ |+++.+. +..+ +++ .+.+.+|++ +. +|.||+|||++++.+
T Consensus 215 ---------------~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~-~~~~d~vi~a~G~~~~~~--- 275 (369)
T 3d1c_A 215 ---------------YTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQS-VHTPHEPILATGFDATKN--- 275 (369)
T ss_dssp ---------------HHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCC-EEESSCCEECCCBCGGGS---
T ss_pred ---------------HHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeE-eccCCceEEeeccCCccc---
Confidence 00112233445564 8888875 7777 344 367889987 64 699999999999842
Q ss_pred cccchhhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 383 IFLSQTFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 383 ~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
++.+.++.+.++.+.++... .++.||||.
T Consensus 276 -----~~~~~~~~~~~g~i~v~~~~~~t~~~~v~a 305 (369)
T 3d1c_A 276 -----PIVQQLFVTTNQDIKLTTHDESTRYPNIFM 305 (369)
T ss_dssp -----HHHHHHSCCTTSCCCBCTTSBBSSSTTEEE
T ss_pred -----hhhhhhccCCCCCEEechhhcccCCCCeEE
Confidence 23333343456668887765 888999996
No 10
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.97 E-value=7.1e-30 Score=244.05 Aligned_cols=266 Identities=17% Similarity=0.258 Sum_probs=199.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|...+|...+.. +.. .......++..+
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG~~~~~~~~~~~~~------~~~--------~~~~~~~~~~~~ 72 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGGQLSALYPEKYIYD------VAG--------FPKIRAQELINN 72 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHHCTTSEECC------STT--------CSSEEHHHHHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCceehhcCCCceEec------cCC--------CCCCCHHHHHHH
Confidence 479999999999999999999999999999999999999987666554321 111 111246789999
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.+++++. .++++++|++++... ++.|.|.+.++ ++.||+||+|||..+
T Consensus 73 ~~~~~~~~~~--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~g------~~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 73 LKEQMAKFDQ--TICLEQAVESVEKQA---------------------DGVFKLVTNEE------THYSKTVIITAGNGA 123 (332)
T ss_dssp HHHHHTTSCC--EEECSCCEEEEEECT---------------------TSCEEEEESSE------EEEEEEEEECCTTSC
T ss_pred HHHHHHHhCC--cEEccCEEEEEEECC---------------------CCcEEEEECCC------EEEeCEEEECCCCCc
Confidence 9999999988 889999999999876 34688888765 499999999999753
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
..|..|+++ |.+.+.+..+|. .+... ...++++|+|||+|.+|+|+|..|...+.. |++++|.+.+
T Consensus 124 ~~p~~~~~~---g~~~~~g~~~~~-~~~~~------~~~~~~~v~vvG~g~~~~e~a~~l~~~~~~---v~~~~~~~~~- 189 (332)
T 3lzw_A 124 FKPRKLELE---NAEQYEGKNLHY-FVDDL------QKFAGRRVAILGGGDSAVDWALMLEPIAKE---VSIIHRRDKF- 189 (332)
T ss_dssp CEECCCCCT---TGGGGBTTTEES-SCSCG------GGGBTCEEEEECSSHHHHHHHHHHTTTBSE---EEEECSSSSC-
T ss_pred CCCCCCCCC---ChhhccCceEEE-ecCCH------HHcCCCEEEEECCCHhHHHHHHHHHhhCCe---EEEEEecCcC-
Confidence 478888888 887766666776 44442 334689999999999999999999888754 9999988752
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
.+.
T Consensus 190 ~~~----------------------------------------------------------------------------- 192 (332)
T 3lzw_A 190 RAH----------------------------------------------------------------------------- 192 (332)
T ss_dssp SSC-----------------------------------------------------------------------------
T ss_pred Ccc-----------------------------------------------------------------------------
Confidence 110
Q ss_pred ccccCcchhhhhccCcEEEeccC-ceeEecCc----EEEcC-----CceeeeccEEEEccCCCCCcchhccccchhhhhh
Q 014821 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDG-----QTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDY 392 (418)
Q Consensus 323 ~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~----v~~~~-----g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~ 392 (418)
+...+.+++.+|+++.+. +..+..+. |.+++ +++ +++|.||+|+|++++..+++.+...
T Consensus 193 -----~~~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~~~~----- 261 (332)
T 3lzw_A 193 -----EHSVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEI-LEIDDLIVNYGFVSSLGPIKNWGLD----- 261 (332)
T ss_dssp -----HHHHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEE-EECSEEEECCCEECCCGGGGGSSCC-----
T ss_pred -----HHHHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEE-EECCEEEEeeccCCCchHHhhcCcc-----
Confidence 000123345567787765 77776543 77765 345 8999999999999986544433322
Q ss_pred hcCCCCCCccceeeeeeccCcccc
Q 014821 393 LAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..++.+.++..+.++.||||.
T Consensus 262 ---~~~g~i~vd~~~~t~~~~vya 282 (332)
T 3lzw_A 262 ---IEKNSIVVKSTMETNIEGFFA 282 (332)
T ss_dssp ---EETTEEECCTTSBCSSTTEEE
T ss_pred ---ccCCeEEeCCCCceecCCEEE
Confidence 335667777666778999985
No 11
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.97 E-value=1e-29 Score=243.71 Aligned_cols=271 Identities=18% Similarity=0.219 Sum_probs=194.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
+++||+|||||++|+++|..|++.|++++|||+++.+||.|...+|...+.. +..+ ......++..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~~------~~~~--------~~~~~~~~~~ 69 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGGQLTALYPEKYIYD------VAGF--------PKVYAKDLVK 69 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCHHHHHTCTTSEECC------STTC--------SSEEHHHHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeeccCCCceeec------cCCC--------CCCCHHHHHH
Confidence 4689999999999999999999999999999999999999877655432211 1100 1124567888
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++.+.+++++. .++++++|..++... +.|.|.+.++ .++.||+||+|||..
T Consensus 70 ~l~~~~~~~~~--~~~~~~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~~~lv~AtG~~ 120 (335)
T 2zbw_A 70 GLVEQVAPFNP--VYSLGERAETLEREG----------------------DLFKVTTSQG-----NAYTAKAVIIAAGVG 120 (335)
T ss_dssp HHHHHHGGGCC--EEEESCCEEEEEEET----------------------TEEEEEETTS-----CEEEEEEEEECCTTS
T ss_pred HHHHHHHHcCC--EEEeCCEEEEEEECC----------------------CEEEEEECCC-----CEEEeCEEEECCCCC
Confidence 99998888887 788899999998876 4577877655 479999999999975
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcc
Q 014821 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (418)
Q Consensus 162 ~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~ 241 (418)
+..|..|+++ |.+.+.+..++.. +.. .....+++|+|||+|.+|+|+|..|...+.. |+++.|++.+
T Consensus 121 ~~~p~~~~i~---g~~~~~~~~~~~~-~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~---V~~v~~~~~~ 187 (335)
T 2zbw_A 121 AFEPRRIGAP---GEREFEGRGVYYA-VKS------KAEFQGKRVLIVGGGDSAVDWALNLLDTARR---ITLIHRRPQF 187 (335)
T ss_dssp EEEECCCCCT---TTTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSSE---EEEECSSSSC
T ss_pred CCCCCCCCCC---ChhhccCcEEEEe-cCc------hhhcCCCEEEEECCCHHHHHHHHHHHhhCCE---EEEEEcCCcc
Confidence 3367777777 7665544333322 222 1234689999999999999999999887654 9999998753
Q ss_pred cccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccc
Q 014821 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (418)
Q Consensus 242 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (418)
. +.. ..
T Consensus 188 ~-~~~-------------~~------------------------------------------------------------ 193 (335)
T 2zbw_A 188 R-AHE-------------AS------------------------------------------------------------ 193 (335)
T ss_dssp C-SCH-------------HH------------------------------------------------------------
T ss_pred C-ccH-------------HH------------------------------------------------------------
Confidence 1 100 00
Q ss_pred cccccCcchhhhhccCcEEEeccC-ceeEecC----cEEEc---CC--ceeeeccEEEEccCCCCCcchhccccchhhhh
Q 014821 322 LTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVD---GQ--TTPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (418)
Q Consensus 322 ~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~----~v~~~---~g--~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~ 391 (418)
.+.+.+.+++.+|+++.+. +.++..+ +|.++ +| ++ +++|.||+|||++++.++.+.+...
T Consensus 194 -----~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~l~~~~~~---- 263 (335)
T 2zbw_A 194 -----VKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELA-LEVDAVLILAGYITKLGPLANWGLA---- 263 (335)
T ss_dssp -----HHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEEEECGGGGGSCCC----
T ss_pred -----HHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEE-EecCEEEEeecCCCCchHhhhccee----
Confidence 0112234566678888874 7777654 47776 77 45 8999999999999986544332222
Q ss_pred hhcCCCCCCccceeeeeeccCcccc
Q 014821 392 YLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
...+.+.++..+.++.||||.
T Consensus 264 ----~~~g~i~vd~~~~t~~~~vya 284 (335)
T 2zbw_A 264 ----LEKNKIKVDTTMATSIPGVYA 284 (335)
T ss_dssp ----EETTEEECCTTCBCSSTTEEE
T ss_pred ----ccCCeeeeCCCCCCCCCCEEE
Confidence 224567777666778999986
No 12
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.96 E-value=6.1e-29 Score=240.92 Aligned_cols=273 Identities=16% Similarity=0.181 Sum_probs=195.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
|+++||+|||||++|+++|..|++.|++++|||+.+.+||.|...+|...+. .+.. .......++.
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg~~~~~~~~~~~~------~~~~--------~~~~~~~~~~ 77 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGGQLAALYPEKHIY------DVAG--------FPEVPAIDLV 77 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTCTTSEEC------CSTT--------CSSEEHHHHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCcccccCCCcccc------cCCC--------CCCCCHHHHH
Confidence 3468999999999999999999999999999999999999987655543221 1110 0112456888
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+++.+.++++++ .+.++++|+.++... ++.|.|.+.++ .++.||+||+|+|.
T Consensus 78 ~~l~~~~~~~~~--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~g-----~~~~~~~li~AtG~ 129 (360)
T 3ab1_A 78 ESLWAQAERYNP--DVVLNETVTKYTKLD---------------------DGTFETRTNTG-----NVYRSRAVLIAAGL 129 (360)
T ss_dssp HHHHHHHHTTCC--EEECSCCEEEEEECT---------------------TSCEEEEETTS-----CEEEEEEEEECCTT
T ss_pred HHHHHHHHHhCC--EEEcCCEEEEEEECC---------------------CceEEEEECCC-----cEEEeeEEEEccCC
Confidence 899999888887 788899999999865 23688887665 57999999999998
Q ss_pred CCCCCCCCCCCCCCC-CCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 161 FSDVPNIPEFPPKKG-PEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.+..|..|+++ | .+.+.+..++.. +.. .....+++|+|||+|.+|+|+|..|...+. +|++++|++
T Consensus 130 ~~~~~~~~~i~---g~~~~~~~~~v~~~-~~~------~~~~~~~~vvVvG~G~~g~e~A~~l~~~g~---~V~lv~~~~ 196 (360)
T 3ab1_A 130 GAFEPRKLPQL---GNIDHLTGSSVYYA-VKS------VEDFKGKRVVIVGGGDSALDWTVGLIKNAA---SVTLVHRGH 196 (360)
T ss_dssp CSCCBCCCGGG---CCCTTTBTTTEESS-CSC------GGGGTTCEEEEECSSHHHHHHHHHTTTTSS---EEEEECSSS
T ss_pred CcCCCCCCCCC---CchhhCcCceEEEe-cCC------HHHcCCCcEEEECCCHHHHHHHHHHHhcCC---EEEEEEcCC
Confidence 75578888777 7 655544334332 222 123468999999999999999999988765 499999887
Q ss_pred cccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccc
Q 014821 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (418)
Q Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 319 (418)
.+. +...
T Consensus 197 ~~~-~~~~------------------------------------------------------------------------ 203 (360)
T 3ab1_A 197 EFQ-GHGK------------------------------------------------------------------------ 203 (360)
T ss_dssp SCS-SCSH------------------------------------------------------------------------
T ss_pred CCC-CCHH------------------------------------------------------------------------
Confidence 421 1100
Q ss_pred cccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEc--CC--ceeeeccEEEEccCCCCCcchhccccchhh
Q 014821 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVD--GQ--TTPLKTDLVILATGFKGDVKLKNIFLSQTF 389 (418)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~--~g--~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~ 389 (418)
..+.+.+.+++.+|+++.+. +..+..+ +|.+. +| ++ +++|.||+|||++++.++++.+...
T Consensus 204 ------~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~l~~~~~~-- 274 (360)
T 3ab1_A 204 ------TAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWT-VEADRLLILIGFKSNLGPLARWDLE-- 274 (360)
T ss_dssp ------HHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEE-EECSEEEECCCBCCSCGGGGGSSCC--
T ss_pred ------HHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEE-EeCCEEEECCCCCCCHHHHHhhccc--
Confidence 00112234556678888884 7777643 46664 77 45 8999999999999996544433222
Q ss_pred hhhhcCCCCCCccceeeeeeccCcccc
Q 014821 390 QDYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..++.+.++..+.++.||||.
T Consensus 275 ------~~~g~i~vd~~~~t~~~~vya 295 (360)
T 3ab1_A 275 ------LYENALVVDSHMKTSVDGLYA 295 (360)
T ss_dssp ------EETTEEECCTTSBCSSTTEEE
T ss_pred ------cccCeeeecCCCcCCCCCEEE
Confidence 224567777666678999986
No 13
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.96 E-value=3e-28 Score=229.09 Aligned_cols=259 Identities=10% Similarity=0.096 Sum_probs=185.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
++||+|||||++|+++|..|++.|++++|||++...+. +..... . ++ .....+..++..+
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~~-~~~~~~-----------~-----~~---~~~~~~~~~~~~~ 61 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRNR-FASHSH-----------G-----FL---GQDGKAPGEIIAE 61 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGGG-GCSCCC-----------S-----ST---TCTTCCHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCcccc-cchhhc-----------C-----Cc---CCCCCCHHHHHHH
Confidence 38999999999999999999999999999999653322 111000 0 11 1223456788999
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.+.+++. ...++++|++++... +.|.|.+.++ .++.||+||+|||..
T Consensus 62 ~~~~~~~~~~--v~~~~~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~d~vviAtG~~- 111 (297)
T 3fbs_A 62 ARRQIERYPT--IHWVEGRVTDAKGSF----------------------GEFIVEIDGG-----RRETAGRLILAMGVT- 111 (297)
T ss_dssp HHHHHTTCTT--EEEEESCEEEEEEET----------------------TEEEEEETTS-----CEEEEEEEEECCCCE-
T ss_pred HHHHHHhcCC--eEEEEeEEEEEEEcC----------------------CeEEEEECCC-----CEEEcCEEEECCCCC-
Confidence 9999888742 233467999999876 5688888776 589999999999964
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
|..|.++ |.+.+.+..++...+.. .....+++|+|||+|.+|+|+|..|...+ . |+++.+++.
T Consensus 112 --~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g-~---v~~v~~~~~-- 174 (297)
T 3fbs_A 112 --DELPEIA---GLRERWGSAVFHCPYCH------GYELDQGKIGVIAASPMAIHHALMLPDWG-E---TTFFTNGIV-- 174 (297)
T ss_dssp --EECCCCB---TTGGGBTTTEESCHHHH------TGGGTTCEEEEECCSTTHHHHHHHGGGTS-E---EEEECTTTC--
T ss_pred --CCCCCCC---CchhhcCCeeEEcccCc------chhhcCCEEEEEecCccHHHHHHHhhhcC-c---EEEEECCCC--
Confidence 6667777 77766554555444322 23356899999999999999999999875 4 999987663
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
.
T Consensus 175 --~----------------------------------------------------------------------------- 175 (297)
T 3fbs_A 175 --E----------------------------------------------------------------------------- 175 (297)
T ss_dssp --C-----------------------------------------------------------------------------
T ss_pred --C-----------------------------------------------------------------------------
Confidence 0
Q ss_pred ccccCcchhhhhccCcEEEeccCceeEecC-cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcCCCCC-C
Q 014821 323 TITVPEKFYDKVEEGSIILKKSQDFSFCED-GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTE-K 400 (418)
Q Consensus 323 ~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~-~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~-~ 400 (418)
+.+.+.+.+++.+|+++...+..+..+ .|.+++|++ +++|.||+|||++++..+++.+....-. ...+ .
T Consensus 176 ---~~~~~~~~l~~~gv~i~~~~v~~i~~~~~v~~~~g~~-~~~D~vi~a~G~~p~~~~~~~~g~~~~~-----~~~G~~ 246 (297)
T 3fbs_A 176 ---PDADQHALLAARGVRVETTRIREIAGHADVVLADGRS-IALAGLFTQPKLRITVDWIEKLGCAVEE-----GPMGST 246 (297)
T ss_dssp ---CCHHHHHHHHHTTCEEECSCEEEEETTEEEEETTSCE-EEESEEEECCEEECCCSCHHHHTCCEEE-----ETTEEE
T ss_pred ---CCHHHHHHHHHCCcEEEcceeeeeecCCeEEeCCCCE-EEEEEEEEccCcccCchhHHhcCCcccc-----CCCCce
Confidence 111223455666788887558888876 799999998 9999999999999986544433222100 0123 5
Q ss_pred ccceeeeeeccCcccc
Q 014821 401 LPLYRSAHIYIDTLTY 416 (418)
Q Consensus 401 ~~~~~~~~~~~~~~~~ 416 (418)
+.++..+.++.||||.
T Consensus 247 i~vd~~~~t~~~~vya 262 (297)
T 3fbs_A 247 IVTDPMKQTTARGIFA 262 (297)
T ss_dssp ECCCTTCBCSSTTEEE
T ss_pred EEeCCCCccCCCCEEE
Confidence 6676667788999985
No 14
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.96 E-value=7.3e-28 Score=229.03 Aligned_cols=259 Identities=17% Similarity=0.188 Sum_probs=188.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
++||+|||||++|+++|..|++.|++|+|||++ +||.|..... .+.+.. .......++.++
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~~~~~~~---------~~~~~~--------~~~~~~~~~~~~ 75 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQLTEAGI---------VDDYLG--------LIEIQASDMIKV 75 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGGGGGCCE---------ECCSTT--------STTEEHHHHHHH
T ss_pred ccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCeeccccc---------ccccCC--------CCCCCHHHHHHH
Confidence 479999999999999999999999999999997 8888876110 000000 111345789999
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.++++++ .+.+ ++|++++... +.|.+.+.++ .++.||+||+|||..
T Consensus 76 ~~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~d~lvlAtG~~- 124 (323)
T 3f8d_A 76 FNKHIEKYEV--PVLL-DIVEKIENRG----------------------DEFVVKTKRK-----GEFKADSVILGIGVK- 124 (323)
T ss_dssp HHHHHHTTTC--CEEE-SCEEEEEEC------------------------CEEEEESSS-----CEEEEEEEEECCCCE-
T ss_pred HHHHHHHcCC--EEEE-EEEEEEEecC----------------------CEEEEEECCC-----CEEEcCEEEECcCCC-
Confidence 9999999988 7777 8999998876 5688887765 489999999999965
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
|..|.++ |.+.+.+..++...+.. .....+++|+|||+|.+|+|+|..|...+.. |++++|++.+.
T Consensus 125 --~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~vvG~G~~~~e~a~~l~~~g~~---v~~~~~~~~~~ 190 (323)
T 3f8d_A 125 --RRKLGVP---GEQEFAGRGISYCSVAD------APLFKNRVVAVIGGGDSALEGAEILSSYSTK---VYLIHRRDTFK 190 (323)
T ss_dssp --ECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHHHHSSE---EEEECSSSSCC
T ss_pred --CccCCCC---chhhhcCCceEEeccCC------HhHcCCCEEEEECCCHHHHHHHHHHHHhCCe---EEEEEeCCCCC
Confidence 6777777 77766555555432221 2446789999999999999999999998754 99999887422
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
. .
T Consensus 191 ~---~--------------------------------------------------------------------------- 192 (323)
T 3f8d_A 191 A---Q--------------------------------------------------------------------------- 192 (323)
T ss_dssp S---C---------------------------------------------------------------------------
T ss_pred c---C---------------------------------------------------------------------------
Confidence 1 0
Q ss_pred ccccCcchhh-hhccCcEEEeccC-ceeEecC----cEEEcC---Cc--eeeeccEEEEccCCCCCcchhccccchhhhh
Q 014821 323 TITVPEKFYD-KVEEGSIILKKSQ-DFSFCED----GIVVDG---QT--TPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (418)
Q Consensus 323 ~~~~~~~~~~-~~~~~~v~~~~~~-v~~~~~~----~v~~~~---g~--~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~ 391 (418)
+.+.+ ..++.+|+++.+. +..+..+ +|.+++ |+ + +++|.||+|+|++++.++++.++..
T Consensus 193 -----~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~g~~---- 262 (323)
T 3f8d_A 193 -----PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKE-LNVNGVFIEIGFDPPTDFAKSNGIE---- 262 (323)
T ss_dssp -----HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEE-EECSEEEECCCEECCHHHHHHTTCC----
T ss_pred -----HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEE-EEcCEEEEEECCCCChhHHhhcCee----
Confidence 01111 2234578888886 7777655 377765 76 5 8999999999999995443332222
Q ss_pred hhcCCCCCCccceeeeeeccCcccc
Q 014821 392 YLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
-+.++.+.++..+.++.||||.
T Consensus 263 ---~~~~g~i~vd~~~~t~~~~vya 284 (323)
T 3f8d_A 263 ---TDTNGYIKVDEWMRTSVPGVFA 284 (323)
T ss_dssp ---BCTTSSBCCCTTCBCSSTTEEE
T ss_pred ---ecCCCcEecCCCceecCCCEEE
Confidence 1446778888777788999996
No 15
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.95 E-value=1.8e-27 Score=227.15 Aligned_cols=262 Identities=18% Similarity=0.193 Sum_probs=185.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
++||+|||||++|+++|..|++.|++++|||+. .+||.|...... ..+..+ ....+..++.++
T Consensus 8 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~---------~~~~~~-------~~~~~~~~~~~~ 70 (325)
T 2q7v_A 8 DYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQIAWSEEV---------ENFPGF-------PEPIAGMELAQR 70 (325)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGGGGCSCB---------CCSTTC-------SSCBCHHHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccccccccc---------ccCCCC-------CCCCCHHHHHHH
Confidence 579999999999999999999999999999997 788887652110 001111 112356788899
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEc--CCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFE--GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+.+.++++++ .+.+ ++|.+++.. . +..|.|.+.++ .++.||+||+|||.
T Consensus 71 l~~~~~~~gv--~~~~-~~v~~i~~~~~~---------------------~~~~~v~~~~g-----~~~~~~~vv~AtG~ 121 (325)
T 2q7v_A 71 MHQQAEKFGA--KVEM-DEVQGVQHDATS---------------------HPYPFTVRGYN-----GEYRAKAVILATGA 121 (325)
T ss_dssp HHHHHHHTTC--EEEE-CCEEEEEECTTS---------------------SSCCEEEEESS-----CEEEEEEEEECCCE
T ss_pred HHHHHHHcCC--EEEe-eeEEEEEeccCC---------------------CceEEEEECCC-----CEEEeCEEEECcCC
Confidence 9999999988 6666 789999876 3 12377777665 48999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
. |..|+++ |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|...+.. |++++|++.
T Consensus 122 ~---~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~ 186 (325)
T 2q7v_A 122 D---PRKLGIP---GEDNFWGKGVSTCATCD------GFFYKGKKVVVIGGGDAAVEEGMFLTKFADE---VTVIHRRDT 186 (325)
T ss_dssp E---ECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSSSS
T ss_pred C---cCCCCCC---ChhhccCceEEEeccCC------HHHcCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEeCCCc
Confidence 4 6667777 76665544455433211 2345679999999999999999999887654 999998774
Q ss_pred ccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccc
Q 014821 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (418)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (418)
+. + .
T Consensus 187 ~~-~--~------------------------------------------------------------------------- 190 (325)
T 2q7v_A 187 LR-A--N------------------------------------------------------------------------- 190 (325)
T ss_dssp CC-S--C-------------------------------------------------------------------------
T ss_pred CC-c--c-------------------------------------------------------------------------
Confidence 21 1 0
Q ss_pred ccccccCcchhh-hhccCcEEEeccC-ceeEecC----cEEEc---CCc-eeeeccEEEEccCCCCCcchhccccchhhh
Q 014821 321 CLTITVPEKFYD-KVEEGSIILKKSQ-DFSFCED----GIVVD---GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (418)
Q Consensus 321 ~~~~~~~~~~~~-~~~~~~v~~~~~~-v~~~~~~----~v~~~---~g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~ 390 (418)
+.+.+ .+++.+|+++.+. +..+..+ +|.++ +|+ ..+++|.||+|||++++.++++.+
T Consensus 191 -------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~------ 257 (325)
T 2q7v_A 191 -------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVPNTAFVKDT------ 257 (325)
T ss_dssp -------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGTTT------
T ss_pred -------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCCChHHHhhh------
Confidence 00111 2233578888775 6677654 46765 675 238999999999999996544322
Q ss_pred hhhcCCCCCCccceeeeeeccCcccc
Q 014821 391 DYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+..+.++.+.++..+.++.||||.
T Consensus 258 --~~~~~~g~i~vd~~~~t~~~~vya 281 (325)
T 2q7v_A 258 --VSLRDDGYVDVRDEIYTNIPMLFA 281 (325)
T ss_dssp --SCBCTTSCBCCBTTTBCSSTTEEE
T ss_pred --cccCCCccEecCCCCccCCCCEEE
Confidence 111346678887777778999986
No 16
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.95 E-value=3e-27 Score=224.17 Aligned_cols=265 Identities=16% Similarity=0.185 Sum_probs=184.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
+||+|||||++|+++|..|++.|+ +++|||++ .+||.|...... ..+..+ .....+.++.++
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~-~~gg~~~~~~~~---------~~~~~~-------~~~~~~~~~~~~ 64 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKG-MPGGQITGSSEI---------ENYPGV-------KEVVSGLDFMQP 64 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSS-STTCGGGGCSCB---------CCSTTC-------CSCBCHHHHHHH
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCC-CCCccccccccc---------ccCCCC-------cccCCHHHHHHH
Confidence 799999999999999999999999 99999994 688877652110 001100 123456788999
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.+.++++ .+.+ ++|.+++... +.|.|.+.++ .++.||+||+|||+.
T Consensus 65 l~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~~~g-----~~~~~~~vv~AtG~~- 113 (311)
T 2q0l_A 65 WQEQCFRFGL--KHEM-TAVQRVSKKD----------------------SHFVILAEDG-----KTFEAKSVIIATGGS- 113 (311)
T ss_dssp HHHHHHTTSC--EEEC-SCEEEEEEET----------------------TEEEEEETTS-----CEEEEEEEEECCCEE-
T ss_pred HHHHHHHcCC--EEEE-EEEEEEEEcC----------------------CEEEEEEcCC-----CEEECCEEEECCCCC-
Confidence 9999988887 6776 7899998866 4577776555 479999999999964
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
|..|+++ |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|...+.. |++++|++.+.
T Consensus 114 --~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~ 179 (311)
T 2q0l_A 114 --PKRTGIK---GESEYWGKGVSTCATCD------GFFYKNKEVAVLGGGDTAVEEAIYLANICKK---VYLIHRRDGFR 179 (311)
T ss_dssp --ECCCCCB---THHHHBTTTEESCHHHH------GGGGTTSEEEEECCSHHHHHHHHHHHTTSSE---EEEECSSSSCC
T ss_pred --CCCCCCC---ChhhccCCcEEEeecCC------hhhcCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEeeCCccC
Confidence 6667676 76554444445432211 2345679999999999999999999988654 99999877421
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
..
T Consensus 180 ---~~--------------------------------------------------------------------------- 181 (311)
T 2q0l_A 180 ---CA--------------------------------------------------------------------------- 181 (311)
T ss_dssp ---SC---------------------------------------------------------------------------
T ss_pred ---CC---------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcchhhhh-ccCcEEEeccC-ceeEecC-----cEEEc---CCc-eeeeccEEEEccCCCCCcchhccccchhhhh
Q 014821 323 TITVPEKFYDKV-EEGSIILKKSQ-DFSFCED-----GIVVD---GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (418)
Q Consensus 323 ~~~~~~~~~~~~-~~~~v~~~~~~-v~~~~~~-----~v~~~---~g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~ 391 (418)
+.+.+.+ ++.+|+++.+. +..+..+ ++.++ +|+ ..+++|.||+|+|++|+.++++.+... .
T Consensus 182 -----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~g~~---~ 253 (311)
T 2q0l_A 182 -----PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDVNNAVLKQEDNS---M 253 (311)
T ss_dssp -----HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEECCGGGBCTTSC---B
T ss_pred -----HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCccChhhhhccccc---c
Confidence 0011122 23568888775 6666543 46665 675 238999999999999996554433100 0
Q ss_pred hhcCCCCCCccceeeeeeccCcccc
Q 014821 392 YLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.+..+.++.+.++..+.++.||||.
T Consensus 254 ~l~~~~~g~i~vd~~~~t~~~~vya 278 (311)
T 2q0l_A 254 LCKCDEYGSIVVDFSMKTNVQGLFA 278 (311)
T ss_dssp SSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred eeEeccCCCEEeCCccccCCCCeEE
Confidence 0111345778887777778999985
No 17
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=99.95 E-value=5.3e-27 Score=222.43 Aligned_cols=268 Identities=21% Similarity=0.252 Sum_probs=189.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEE-EeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIV-FEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~i-ie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
+++||+|||||++|+++|..|++.|++++| +|+ +.+||.|...... ..+|. .....+..++.
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~-~~~gG~~~~~~~~------------~~~~~----~~~~~~~~~~~ 65 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEK-GMPGGQITSSSEI------------ENYPG----VAQVMDGISFM 65 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECS-SSTTGGGGGCSCB------------CCSTT----CCSCBCHHHHH
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeC-CCCCceeeeecee------------ccCCC----CCCCCCHHHHH
Confidence 568999999999999999999999999999 999 7789988763211 00110 12234668999
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.++.+.++++++ .+.++ +|+++ .+. ..+.|.+.+... + ++.||+||+|||.
T Consensus 66 ~~~~~~~~~~~v--~~~~~-~v~~i-~~~--------------------~~~~~~v~~~~~--~---~~~~d~lvlAtG~ 116 (315)
T 3r9u_A 66 APWSEQCMRFGL--KHEMV-GVEQI-LKN--------------------SDGSFTIKLEGG--K---TELAKAVIVCTGS 116 (315)
T ss_dssp HHHHHHHTTTCC--EEECC-CEEEE-EEC--------------------TTSCEEEEETTS--C---EEEEEEEEECCCE
T ss_pred HHHHHHHHHcCc--EEEEE-EEEEE-ecC--------------------CCCcEEEEEecC--C---EEEeCEEEEeeCC
Confidence 999999999998 77776 88888 433 014577544443 1 8999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.|..|.++ |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|...+.. |++++|.+.
T Consensus 117 ---~~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~g~~~~e~a~~l~~~g~~---v~~~~~~~~ 181 (315)
T 3r9u_A 117 ---APKKAGFK---GEDEFFGKGVSTCATCD------GFFYKNKEVAVLGGGDTALEEALYLANICSK---IYLIHRRDE 181 (315)
T ss_dssp ---EECCCCCB---TTTTTBTTTEESCHHHH------GGGGTTSEEEEECCBHHHHHHHHHHHTTSSE---EEEECSSSS
T ss_pred ---CCCCCCCC---ChhhcCCCeEEeeeccc------ccccCcCEEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCCC
Confidence 46777777 77766555666544332 2345689999999999999999999988754 999998875
Q ss_pred ccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccc
Q 014821 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (418)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (418)
+. . . . .
T Consensus 182 ~~-~--~-------~----~------------------------------------------------------------ 187 (315)
T 3r9u_A 182 FR-A--A-------P----S------------------------------------------------------------ 187 (315)
T ss_dssp CB-S--C-------H----H------------------------------------------------------------
T ss_pred CC-C--C-------H----H------------------------------------------------------------
Confidence 31 1 0 0 0
Q ss_pred ccccccCcchhhhhccCcEEEeccC-ceeEecCc-----EEEc--CCc--eeeeccEEEEccCCCCCcchhccccchhhh
Q 014821 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG-----IVVD--GQT--TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (418)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~-----v~~~--~g~--~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~ 390 (418)
-+.+.+++.+|+++.+. +..+..+. ++++ +|+ + +++|.||+|+|++|+..+.+.....-
T Consensus 188 --------~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~-~~~D~vv~a~G~~p~~~~~~~~~~~g-- 256 (315)
T 3r9u_A 188 --------TVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRD-LNVPGIFTFVGLNVRNEILKQDDSKF-- 256 (315)
T ss_dssp --------HHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEE-ECCSCEEECSCEEECCGGGBCTTSCB--
T ss_pred --------HHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEE-eecCeEEEEEcCCCCchhhhcccccc--
Confidence 00123345678888776 77775443 6666 776 5 89999999999999965544310000
Q ss_pred hhhcCCCCCCccceeeeeeccCcccc
Q 014821 391 DYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.+..+.++.+.++..+.++.||||.
T Consensus 257 -~l~~~~~g~i~vd~~~~t~~~~v~a 281 (315)
T 3r9u_A 257 -LCNMEEGGQVSVDLKMQTSVAGLFA 281 (315)
T ss_dssp -SSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred -eeeecCCCcEEeCCCcccCCCCEEE
Confidence 0111445778888777779999985
No 18
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.95 E-value=2.3e-27 Score=227.18 Aligned_cols=266 Identities=19% Similarity=0.254 Sum_probs=186.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC----CCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR----SDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~----~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
++||+|||||++|+++|..|++.|++|+|||+. ..+||.|..... +..+|- ...+....+
T Consensus 22 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~~------------~~~~~~----~~~~~~~~~ 85 (338)
T 3itj_A 22 HNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTTE------------IENFPG----FPDGLTGSE 85 (338)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSSE------------ECCSTT----CTTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccchh------------hcccCC----CcccCCHHH
Confidence 589999999999999999999999999999994 478887776321 000100 122345678
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+..++.+.++++++ .+.+++ |++++... +.|.+.+... +...++.+|+||+|+
T Consensus 86 ~~~~~~~~~~~~gv--~i~~~~-v~~i~~~~----------------------~~~~v~~~~~--~~~~~~~~d~vvlAt 138 (338)
T 3itj_A 86 LMDRMREQSTKFGT--EIITET-VSKVDLSS----------------------KPFKLWTEFN--EDAEPVTTDAIILAT 138 (338)
T ss_dssp HHHHHHHHHHHTTC--EEECSC-EEEEECSS----------------------SSEEEEETTC--SSSCCEEEEEEEECC
T ss_pred HHHHHHHHHHHcCC--EEEEeE-EEEEEEcC----------------------CEEEEEEEec--CCCcEEEeCEEEECc
Confidence 99999999999998 788877 99998765 5677766422 112578999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|.. |..|.++ |.+.+.+..++...+.... .....+++|+|||+|.+|+|+|..|...+.. |++++|+
T Consensus 139 G~~---~~~~~~~---g~~~~~~~~~~~~~~~~~~----~~~~~~~~v~vvG~G~~g~e~a~~l~~~g~~---v~~v~~~ 205 (338)
T 3itj_A 139 GAS---AKRMHLP---GEETYWQKGISACAVCDGA----VPIFRNKPLAVIGGGDSACEEAQFLTKYGSK---VFMLVRK 205 (338)
T ss_dssp CEE---ECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSS
T ss_pred CCC---cCCCCCC---CchhccCccEEEchhcccc----hhhcCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEEcC
Confidence 964 6677777 7665544445543321100 1245689999999999999999999988754 9999988
Q ss_pred CcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccc
Q 014821 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (418)
Q Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (418)
+.+...
T Consensus 206 ~~~~~~-------------------------------------------------------------------------- 211 (338)
T 3itj_A 206 DHLRAS-------------------------------------------------------------------------- 211 (338)
T ss_dssp SSCCSC--------------------------------------------------------------------------
T ss_pred CccCCC--------------------------------------------------------------------------
Confidence 752110
Q ss_pred ccccccccCcchhhhhc-cCcEEEeccC-ceeEecCc-----EEEcC-----CceeeeccEEEEccCCCCCcchhccccc
Q 014821 319 SSCLTITVPEKFYDKVE-EGSIILKKSQ-DFSFCEDG-----IVVDG-----QTTPLKTDLVILATGFKGDVKLKNIFLS 386 (418)
Q Consensus 319 ~~~~~~~~~~~~~~~~~-~~~v~~~~~~-v~~~~~~~-----v~~~~-----g~~~~~~D~Vi~atG~~~~~~~~~~l~~ 386 (418)
+.+.+.+. ..+|+++.+. +..+..++ |++++ +++ +++|.||+|||++++..+.+. .
T Consensus 212 ---------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~-i~~D~vi~a~G~~p~~~~~~~-~- 279 (338)
T 3itj_A 212 ---------TIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETD-LPVSGLFYAIGHTPATKIVAG-Q- 279 (338)
T ss_dssp ---------HHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEE-EECSEEEECSCEEECCGGGBT-T-
T ss_pred ---------HHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEE-EEeCEEEEEeCCCCChhHhhC-c-
Confidence 11122333 3478888875 77776543 77765 345 999999999999999654432 1
Q ss_pred hhhhhhhcCCCCCCccc-eeeeeeccCcccc
Q 014821 387 QTFQDYLAGSPTEKLPL-YRSAHIYIDTLTY 416 (418)
Q Consensus 387 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 416 (418)
+.-+.++.+.+ ...+.++.||||.
T Consensus 280 ------l~~~~~G~i~v~~~~~~t~~~~vya 304 (338)
T 3itj_A 280 ------VDTDEAGYIKTVPGSSLTSVPGFFA 304 (338)
T ss_dssp ------BCBCTTSCBCCCTTSSBCSSTTEEE
T ss_pred ------eEecCCCcEEEcCcccccCCCCEEE
Confidence 11144667764 4445788999985
No 19
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.95 E-value=6.2e-27 Score=234.53 Aligned_cols=209 Identities=21% Similarity=0.312 Sum_probs=142.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC-----CceEEEeeCCCCCccccc--cCCcceecC-----------CccccccCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG-----FHPIVFEARSDIGGAWIK--TVETTMLQT-----------PKQLYQFSDYP 64 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~-----~~v~iie~~~~~gg~~~~--~~~~~~l~~-----------~~~~~~~~~~~ 64 (418)
.+||+|||||++|+++|..|++.| .+|+|||+++.+| |.. ..++..++. |...+.|..+.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g--~~~~~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~l 107 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYR--WHGNTLVSQSELQISFLKDLVSLRNPTSPYSFVNYL 107 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCC--SSGGGCCSSCBCSSCTTSSSSTTTCTTCTTSHHHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCC--CcCCCCCCCCcCCcchhhccccccCCCCCCChhHhh
Confidence 469999999999999999999999 9999999998887 544 334444432 22222222110
Q ss_pred CCC-------CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCce--E
Q 014821 65 WPD-------SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKW--T 135 (418)
Q Consensus 65 ~~~-------~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 135 (418)
... .+...++++.++.+|+++++++++. .+.++++|++++... + ..+.| .
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~i~~~~~V~~i~~~~--~-----------------~~~~~~~~ 166 (463)
T 3s5w_A 108 HKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQE--QSRYGEEVLRIEPML--S-----------------AGQVEALR 166 (463)
T ss_dssp HHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTT--TEEESEEEEEEEEEE--E-----------------TTEEEEEE
T ss_pred hhcCceeecccccCCCCCHHHHHHHHHHHHHHcCC--eEEeCCEEEEEEEec--C-----------------CCceEEEE
Confidence 000 1134567889999999999999987 899999999998862 0 01345 5
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCc--eEEeccCCCCchhhhhhhhcCCCEEEEEcCCC
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHG--KVIHSMDYSDMDYEAAANLVKGKRVTVVGLQK 213 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~ 213 (418)
|.+.++. +...++.||+||+|||. .|.+|+. .+.+.+ .++|+..+............++++|+|||+|.
T Consensus 167 V~~~~g~-g~~~~~~~d~lVlAtG~---~p~~p~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vvVvGgG~ 237 (463)
T 3s5w_A 167 VISRNAD-GEELVRTTRALVVSPGG---TPRIPQV-----FRALKGDGRVFHHSQYLEHMAKQPCSSGKPMKIAIIGGGQ 237 (463)
T ss_dssp EEEEETT-SCEEEEEESEEEECCCC---EECCCGG-----GGGGTTCTTEEEGGGHHHHHCC-------CEEEEEECCSH
T ss_pred EEEecCC-CceEEEEeCEEEECCCC---CCCCcch-----hhhcCCCCcEEECHHHHhhHHHhhhcccCCCeEEEECCCH
Confidence 5555543 44458999999999995 4666652 233334 57887766431100000112588999999999
Q ss_pred CHHHHHHHHhhhcCCCCCeEEEEecCcccccC
Q 014821 214 SALDIAMECTTANGLENPCTVLYRTEHWNIPD 245 (418)
Q Consensus 214 sa~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~ 245 (418)
+|+|+|..|...... .+|++++|++.+ .|.
T Consensus 238 sg~e~a~~l~~~~~~-~~Vt~v~r~~~~-~p~ 267 (463)
T 3s5w_A 238 SAAEAFIDLNDSYPS-VQADMILRASAL-KPA 267 (463)
T ss_dssp HHHHHHHHHHHHCTT-EEEEEECSSSSC-CBC
T ss_pred hHHHHHHHHHhcCCC-CeEEEEEeCCCC-cCc
Confidence 999999999998222 459999999874 443
No 20
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.94 E-value=3.4e-27 Score=224.60 Aligned_cols=265 Identities=17% Similarity=0.291 Sum_probs=182.2
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
|+.+||+|||||++|+++|..|++.|++++|||+ ..+||.|...... ..+..+ .......++.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~---------~~~~~~-------~~~~~~~~~~ 65 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANLQPVLITG-MEKGGQLTTTTEV---------ENWPGD-------PNDLTGPLLM 65 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTCCCEEECC-SSTTGGGGGCSBC---------CCSTTC-------CSSCBHHHHH
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEcc-CCCCceEecchhh---------hhCCCC-------CCCCCHHHHH
Confidence 4568999999999999999999999999999997 4688876542100 001101 1123456888
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+++.+.+.++++ .+++++ |..++... +.|.+ +.++ .++.||+||+|||.
T Consensus 66 ~~~~~~~~~~~~--~~~~~~-v~~i~~~~----------------------~~~~v-~~~~-----~~~~~~~lv~AtG~ 114 (320)
T 1trb_A 66 ERMHEHATKFET--EIIFDH-INKVDLQN----------------------RPFRL-NGDN-----GEYTCDALIIATGA 114 (320)
T ss_dssp HHHHHHHHHTTC--EEECCC-EEEEECSS----------------------SSEEE-EESS-----CEEEEEEEEECCCE
T ss_pred HHHHHHHHHCCC--EEEEee-eeEEEecC----------------------CEEEE-EeCC-----CEEEcCEEEECCCC
Confidence 899999988888 777764 88888655 55777 4444 47999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
. |..|+++ |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|...+.. |++++|++.
T Consensus 115 ~---~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~ 179 (320)
T 1trb_A 115 S---ARYLGLP---SEEAFKGRGVSACATSD------GFFYRNQKVAVIGGGNTAVEEALYLSNIASE---VHLIHRRDG 179 (320)
T ss_dssp E---ECCCCCH---HHHHTBTTTEESCHHHH------GGGGTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSSS
T ss_pred C---cCCCCCC---ChHHhCCceeEecccCC------ccccCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEeCCc
Confidence 5 6666666 65544443444332221 2335689999999999999999999888754 999998774
Q ss_pred ccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccc
Q 014821 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (418)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (418)
+... . .
T Consensus 180 ~~~~----------~----~------------------------------------------------------------ 185 (320)
T 1trb_A 180 FRAE----------K----I------------------------------------------------------------ 185 (320)
T ss_dssp CCCC----------H----H------------------------------------------------------------
T ss_pred cccC----------H----H------------------------------------------------------------
Confidence 3110 0 0
Q ss_pred ccccccCcchhhhhccCcEEEeccC-ceeEecCc-----EEEcC----Cc-eeeeccEEEEccCCCCCcchhccccchhh
Q 014821 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG-----IVVDG----QT-TPLKTDLVILATGFKGDVKLKNIFLSQTF 389 (418)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~-----v~~~~----g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~ 389 (418)
+.+.+.+.+++.+|+++.+. +..+..+. |.+++ |+ +.+++|.||+|+|++++..+.+
T Consensus 186 -----~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~~~~~~------- 253 (320)
T 1trb_A 186 -----LIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPNTAIFE------- 253 (320)
T ss_dssp -----HHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEESCGGGT-------
T ss_pred -----HHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCChHHhc-------
Confidence 00112234566778888886 77776543 77765 42 2389999999999999965443
Q ss_pred hhhhcCCCCCCccceeee-----eeccCcccc
Q 014821 390 QDYLAGSPTEKLPLYRSA-----HIYIDTLTY 416 (418)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 416 (418)
..+..+ ++.+.++..+ .++.||||.
T Consensus 254 -~~l~~~-~G~i~vd~~~~~~~~~t~~~~vya 283 (320)
T 1trb_A 254 -GQLELE-NGYIKVQSGIHGNATQTSIPGVFA 283 (320)
T ss_dssp -TTSCEE-TTEECCCCSSSSCTTBCSSTTEEE
T ss_pred -cccccc-CceEEECCCcccccccCCCCCEEE
Confidence 111112 5667776663 788999985
No 21
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.94 E-value=1.3e-26 Score=219.62 Aligned_cols=263 Identities=14% Similarity=0.191 Sum_probs=183.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
++||+|||||++|+++|..|++.|++++|||+ ..||.|...... ..+. ...+....++..+
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~--~~gG~~~~~~~~---------~~~~--------~~~~~~~~~~~~~ 61 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGE--RFGGQILDTVDI---------ENYI--------SVPKTEGQKLAGA 61 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECS--STTGGGGGCCEE---------CCBT--------TBSSEEHHHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeC--CCCceecccccc---------cccc--------CcCCCCHHHHHHH
Confidence 37999999999999999999999999999986 478887652210 0000 1123355688899
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.++++++ .+.++++|+.++... + ..+.|.|.+.++ .++.||+||+|||+.
T Consensus 62 ~~~~~~~~~v--~~~~~~~v~~i~~~~--~-----------------~~~~~~v~~~~g-----~~~~~~~lv~AtG~~- 114 (310)
T 1fl2_A 62 LKVHVDEYDV--DVIDSQSASKLIPAA--V-----------------EGGLHQIETASG-----AVLKARSIIVATGAK- 114 (310)
T ss_dssp HHHHHHTSCE--EEECSCCEEEEECCS--S-----------------TTCCEEEEETTS-----CEEEEEEEEECCCEE-
T ss_pred HHHHHHHcCC--eEEccCEEEEEEecc--c-----------------CCceEEEEECCC-----CEEEeCEEEECcCCC-
Confidence 9999998888 788888999998653 0 013588887665 479999999999965
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
|..|+++ |.+.+.+..++..... ......+++|+|||+|.+|+|+|..|...+.. |+++.|.+.+.
T Consensus 115 --~~~~~~~---g~~~~~~~~~~~~~~~------~~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~---Vtlv~~~~~~~ 180 (310)
T 1fl2_A 115 --WRNMNVP---GEDQYRTKGVTYCPHC------DGPLFKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEMK 180 (310)
T ss_dssp --ECCCCCT---TTTTTBTTTEESCHHH------HGGGGBTCEEEEECCSHHHHHHHHHHHTTBSE---EEEECSSSSCC
T ss_pred --cCCCCCC---ChhhcccceeEEeccC------cHhhcCCCEEEEECCCHHHHHHHHHHHHhCCE---EEEEEeCcccC
Confidence 5566666 7665544444433221 12345689999999999999999999887754 99999887531
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
..
T Consensus 181 ---~~--------------------------------------------------------------------------- 182 (310)
T 1fl2_A 181 ---AD--------------------------------------------------------------------------- 182 (310)
T ss_dssp ---SC---------------------------------------------------------------------------
T ss_pred ---cc---------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccCcchhhhhcc-CcEEEeccC-ceeEecC-----cEEEcC---Cc-eeeeccEEEEccCCCCCcchhccccchhhhh
Q 014821 323 TITVPEKFYDKVEE-GSIILKKSQ-DFSFCED-----GIVVDG---QT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (418)
Q Consensus 323 ~~~~~~~~~~~~~~-~~v~~~~~~-v~~~~~~-----~v~~~~---g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~ 391 (418)
+.+.+.+++ .+|+++.+. +.++..+ +|.+++ |+ ..+++|.||+|+|++|+.++++ .
T Consensus 183 -----~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~--------~ 249 (310)
T 1fl2_A 183 -----QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLPNTNWLE--------G 249 (310)
T ss_dssp -----HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGGT--------T
T ss_pred -----HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCccCchHHh--------c
Confidence 001122333 468888775 6666643 466653 54 2389999999999999854332 2
Q ss_pred hhcCCCCCCccceeeeeeccCcccc
Q 014821 392 YLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.+..+..+.+.++..+.++.||||.
T Consensus 250 ~l~~~~~g~i~vd~~~~t~~~~vya 274 (310)
T 1fl2_A 250 AVERNRMGEIIIDAKCETNVKGVFA 274 (310)
T ss_dssp TSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred cccccCCCcEEcCCCCccCCCCEEE
Confidence 1111345678887777788999986
No 22
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.94 E-value=1e-26 Score=220.11 Aligned_cols=260 Identities=12% Similarity=0.108 Sum_probs=170.5
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
|+.+||+||||||||++||.+|++.|++++|||+. .+||.+...+++. +. ....+..++.
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~-~~gg~~~~~~~~~--------------~~-----~~~~~~~~~~ 63 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNN-TNRNRVTQNSHGF--------------IT-----RDGIKPEEFK 63 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECS-CCGGGGSSCBCCS--------------TT-----CTTBCHHHHH
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCCeeeeecCCc--------------cC-----CCCCCHHHHH
Confidence 88999999999999999999999999999999995 4666554433321 11 1112345666
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+.......+++. ...+...+..+.... .+.+.+.+.++ .++.||+||||||+
T Consensus 64 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~---------------------~~~~~v~~~~g-----~~~~a~~liiATGs 115 (304)
T 4fk1_A 64 EIGLNEVMKYPS--VHYYEKTVVMITKQS---------------------TGLFEIVTKDH-----TKYLAERVLLATGM 115 (304)
T ss_dssp HHHHHHHTTSTT--EEEEECCEEEEEECT---------------------TSCEEEEETTC-----CEEEEEEEEECCCC
T ss_pred HHHHHHHHhcCC--EEEEeeEEEEeeecC---------------------CCcEEEEECCC-----CEEEeCEEEEccCC
Confidence 666666666665 445556777776655 35678887776 58999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCC-HHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKS-ALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~s-a~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.|..|+++ |.+.+.+..++...... ....++++++|||+|.. ++|+|..+...+.. |+++.+..
T Consensus 116 ---~p~~p~i~---G~~~~~~~~v~~~~~~~------~~~~~~~~~~VIggG~~~~~e~a~~~~~~~~~---v~i~~~~~ 180 (304)
T 4fk1_A 116 ---QEEFPSIP---NVREYYGKSLFSCPYCD------GWELKDQPLIIISENEDHTLHMTKLVYNWSTD---LVIATNGN 180 (304)
T ss_dssp ---EEECCSCT---THHHHBTTTEESCHHHH------SGGGTTSCEEEECCSHHHHHHHHHHHTTTCSC---EEEECSSC
T ss_pred ---cccccccc---Cccccccceeeeccccc------hhHhcCCceeeecCCCchhhhHHHHHHhCCce---EEEEeccc
Confidence 57888888 77655443333222211 23356788889998865 56787777666554 88877654
Q ss_pred cccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccc
Q 014821 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (418)
Q Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 319 (418)
.+ .
T Consensus 181 ~~-~---------------------------------------------------------------------------- 183 (304)
T 4fk1_A 181 EL-S---------------------------------------------------------------------------- 183 (304)
T ss_dssp CC-C----------------------------------------------------------------------------
T ss_pred cc-h----------------------------------------------------------------------------
Confidence 21 0
Q ss_pred cccccccCcchhhhhccCcEEEeccCceeEecC-----cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhc
Q 014821 320 SCLTITVPEKFYDKVEEGSIILKKSQDFSFCED-----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (418)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~-----~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~ 394 (418)
+.+.+.+++.++.++.+.+..+..+ .|.+++|++ +++|.+|+++|..++..++..++..
T Consensus 184 --------~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~-i~~~~~vi~~g~~~~~~~~~~~g~~------- 247 (304)
T 4fk1_A 184 --------QTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLR-IERAGGFIVPTFFRPNQFIEQLGCE------- 247 (304)
T ss_dssp --------HHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCE-ECCCEEEECCEEECSSCHHHHTTCC-------
T ss_pred --------hhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccce-eeecceeeeeccccCChhhhhcCeE-------
Confidence 0111223333444454444444432 378899999 9999988888877775443332222
Q ss_pred CCCCCCccceeeeeeccCcccc
Q 014821 395 GSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
-+.++.+.++..+.+++||||.
T Consensus 248 ~~~~G~I~vd~~~~Ts~p~IyA 269 (304)
T 4fk1_A 248 LQSNGTFVIDDFGRTSEKNIYL 269 (304)
T ss_dssp CCTTSSSCSSTTCBCSSTTEEE
T ss_pred ECCCCCEEECcCCccCCCCEEE
Confidence 1446778888888999999995
No 23
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.94 E-value=8.7e-27 Score=223.53 Aligned_cols=261 Identities=18% Similarity=0.292 Sum_probs=182.4
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
..+||+|||||++|+++|..|++.|++++|||+. .+||.|...... ..+..+ .......++..
T Consensus 13 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~~~~~~~---------~~~~~~-------~~~~~~~~~~~ 75 (335)
T 2a87_A 13 PVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGT-SFGGALMTTTDV---------ENYPGF-------RNGITGPELMD 75 (335)
T ss_dssp CCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCS-SCSCGGGSCSCB---------CCSTTC-------TTCBCHHHHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCceeccchh---------hhcCCC-------CCCCCHHHHHH
Confidence 3589999999999999999999999999999984 688877552110 001111 11134568889
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEE-EEecCCCCceeEEEeCEEEEeecc
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTV-AVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
++.+.+.++++ .+++++ |.+++. . +.|.| .+.++ .++.||+||+|||.
T Consensus 76 ~l~~~~~~~~v--~~~~~~-v~~i~~-~----------------------~~~~v~~~~~g-----~~~~~d~lviAtG~ 124 (335)
T 2a87_A 76 EMREQALRFGA--DLRMED-VESVSL-H----------------------GPLKSVVTADG-----QTHRARAVILAMGA 124 (335)
T ss_dssp HHHHHHHHTTC--EEECCC-EEEEEC-S----------------------SSSEEEEETTS-----CEEEEEEEEECCCE
T ss_pred HHHHHHHHcCC--EEEEee-EEEEEe-C----------------------CcEEEEEeCCC-----CEEEeCEEEECCCC
Confidence 99999988888 777765 888876 4 34777 66554 57999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
. |..|+++ |.+.+.+..+|...+.. .....+++|+|||+|.+|+|+|..|...+. +|+++.|++.
T Consensus 125 ~---~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~ViG~G~~g~e~a~~l~~~g~---~V~l~~~~~~ 189 (335)
T 2a87_A 125 A---ARYLQVP---GEQELLGRGVSSCATCD------GFFFRDQDIAVIGGGDSAMEEATFLTRFAR---SVTLVHRRDE 189 (335)
T ss_dssp E---ECCCCCT---HHHHTBTTTEESCHHHH------GGGGTTCEEEEECSSHHHHHHHHHHTTTCS---EEEEECSSSS
T ss_pred C---ccCCCCC---chHhccCCceEEeeccc------hhhcCCCEEEEECCCHHHHHHHHHHHHhCC---eEEEEEcCCc
Confidence 5 6666666 66555444455432211 233568999999999999999999988765 4999998774
Q ss_pred ccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccc
Q 014821 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (418)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (418)
+...
T Consensus 190 ~~~~---------------------------------------------------------------------------- 193 (335)
T 2a87_A 190 FRAS---------------------------------------------------------------------------- 193 (335)
T ss_dssp CSSC----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 3110
Q ss_pred ccccccCcchh-hhhccCcEEEeccC-ceeEecCc----EEEc---CCc-eeeeccEEEEccCCCCCcchhccccchhhh
Q 014821 321 CLTITVPEKFY-DKVEEGSIILKKSQ-DFSFCEDG----IVVD---GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (418)
Q Consensus 321 ~~~~~~~~~~~-~~~~~~~v~~~~~~-v~~~~~~~----v~~~---~g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~ 390 (418)
+.+. +.+++.+|+++.+. +..+..++ +.++ +|+ +.+++|.||+|+|++++..+.+
T Consensus 194 -------~~~~~~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~~-------- 258 (335)
T 2a87_A 194 -------KIMLDRARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEPRSGLVR-------- 258 (335)
T ss_dssp -------TTHHHHHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEECCTTTB--------
T ss_pred -------HHHHHHHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCccChhHhh--------
Confidence 0011 23345678888775 77776543 7765 453 2389999999999999965443
Q ss_pred hhhcCCCCCCccceeee-eeccCcccc
Q 014821 391 DYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 391 ~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
..+..+.++.+.++..+ .++.||||.
T Consensus 259 ~~l~~~~~G~i~vd~~~~~t~~~~iya 285 (335)
T 2a87_A 259 EAIDVDPDGYVLVQGRTTSTSLPGVFA 285 (335)
T ss_dssp TTBCBCTTSCBCCSTTSSBCSSTTEEE
T ss_pred cccccCCCccEEeCCCCCccCCCCEEE
Confidence 11111446778887765 888999995
No 24
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.94 E-value=1.8e-26 Score=220.91 Aligned_cols=263 Identities=18% Similarity=0.232 Sum_probs=179.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEee----CCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEA----RSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~----~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
++||+|||||++|+++|..|++.|++++|||+ ....||.|..... ...+..+ .......+
T Consensus 8 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~~---------~~~~~~~-------~~~~~~~~ 71 (333)
T 1vdc_A 8 NTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTTD---------VENFPGF-------PEGILGVE 71 (333)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCSE---------ECCSTTC-------TTCEEHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeeccc---------cccCCCC-------ccCCCHHH
Confidence 47999999999999999999999999999999 4556666544210 0011111 11124568
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+..++.+.++++++ .+.+++ |.+++... +.|+|.+ ++ .++.||+||+|+
T Consensus 72 ~~~~l~~~~~~~gv--~~~~~~-v~~i~~~~----------------------~~~~v~~-~~-----~~~~~~~vv~A~ 120 (333)
T 1vdc_A 72 LTDKFRKQSERFGT--TIFTET-VTKVDFSS----------------------KPFKLFT-DS-----KAILADAVILAI 120 (333)
T ss_dssp HHHHHHHHHHHTTC--EEECCC-CCEEECSS----------------------SSEEEEC-SS-----EEEEEEEEEECC
T ss_pred HHHHHHHHHHHCCC--EEEEeE-EEEEEEcC----------------------CEEEEEE-CC-----cEEEcCEEEECC
Confidence 88899988888888 777765 88888755 5678876 43 589999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCC----CCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEE
Q 014821 159 GRFSDVPNIPEFPPKKGPEA----FHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTV 234 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~ 234 (418)
|.. |..|+++ |.+. |.+..+|+..+.... .....+++|+|||+|.+|+|+|..|...+.. |++
T Consensus 121 G~~---~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~v~VvG~G~~g~e~A~~l~~~g~~---V~l 187 (333)
T 1vdc_A 121 GAV---AKRLSFV---GSGEVLGGFWNRGISACAVCDGA----APIFRNKPLAVIGGGDSAMEEANFLTKYGSK---VYI 187 (333)
T ss_dssp CEE---ECCCCCB---TCSSSSSCCBTTTEESCHHHHTT----SGGGTTSEEEEECCSHHHHHHHHHHTTTSSE---EEE
T ss_pred CCC---cCCCCCC---CccccccccccCcEEEeccCccc----hhhcCCCeEEEECCChHHHHHHHHHHhcCCe---EEE
Confidence 965 5566666 5544 433444433221100 0125689999999999999999999887654 999
Q ss_pred EEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccc
Q 014821 235 LYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSF 314 (418)
Q Consensus 235 ~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 314 (418)
+.|++.+.. .
T Consensus 188 v~~~~~~~~---~------------------------------------------------------------------- 197 (333)
T 1vdc_A 188 IHRRDAFRA---S------------------------------------------------------------------- 197 (333)
T ss_dssp ECSSSSCCS---C-------------------------------------------------------------------
T ss_pred EecCCcCCc---c-------------------------------------------------------------------
Confidence 998874210 0
Q ss_pred ccccccccccccCcchh-hhhccCcEEEeccC-ceeEecCc-------EEEc---CCc-eeeeccEEEEccCCCCCcchh
Q 014821 315 LQELSSCLTITVPEKFY-DKVEEGSIILKKSQ-DFSFCEDG-------IVVD---GQT-TPLKTDLVILATGFKGDVKLK 381 (418)
Q Consensus 315 ~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~-v~~~~~~~-------v~~~---~g~-~~~~~D~Vi~atG~~~~~~~~ 381 (418)
+.+. +.+++.+|+++.+. +..+..++ +.++ +|+ +.+++|.||+|+|++++..+.
T Consensus 198 -------------~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~~ 264 (333)
T 1vdc_A 198 -------------KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEPATKFL 264 (333)
T ss_dssp -------------HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEESCGGG
T ss_pred -------------HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCccchHHh
Confidence 0011 23345678888775 66775432 6765 453 238999999999999996544
Q ss_pred ccccchhhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 382 NIFLSQTFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 382 ~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
+ ..+..+.++.+.++..+ .++.||||.
T Consensus 265 ~--------~~l~~~~~G~i~vd~~~~~t~~~~vya 292 (333)
T 1vdc_A 265 D--------GGVELDSDGYVVTKPGTTQTSVPGVFA 292 (333)
T ss_dssp T--------TSSCBCTTSCBCCCTTSCBCSSTTEEE
T ss_pred h--------ccccccCCCCEEechhhcccCCCCEEE
Confidence 3 11111446778887765 788999995
No 25
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.94 E-value=2.8e-26 Score=218.34 Aligned_cols=260 Identities=15% Similarity=0.179 Sum_probs=177.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.+||+|||||++|+++|..|++.|++++|||+ ..+||.|.....- ..+..+ ......++.++
T Consensus 16 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~-~~~gg~~~~~~~~---------~~~~~~--------~~~~~~~~~~~ 77 (319)
T 3cty_A 16 DFDVVIVGAGAAGFSAAVYAARSGFSVAILDK-AVAGGLTAEAPLV---------ENYLGF--------KSIVGSELAKL 77 (319)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SSTTGGGGGCSCB---------CCBTTB--------SSBCHHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCcEEEEeC-CCCCccccccchh---------hhcCCC--------cccCHHHHHHH
Confidence 47999999999999999999999999999999 5688877642110 001100 12345678888
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.++++++ .+.+ ++|.+++... +.|.|.+ ++ .++.||+||+|+|+.
T Consensus 78 ~~~~~~~~~v--~~~~-~~v~~i~~~~----------------------~~~~v~~-~~-----~~~~~~~li~AtG~~- 125 (319)
T 3cty_A 78 FADHAANYAK--IREG-VEVRSIKKTQ----------------------GGFDIET-ND-----DTYHAKYVIITTGTT- 125 (319)
T ss_dssp HHHHHHTTSE--EEET-CCEEEEEEET----------------------TEEEEEE-SS-----SEEEEEEEEECCCEE-
T ss_pred HHHHHHHcCC--EEEE-eeEEEEEEeC----------------------CEEEEEE-CC-----CEEEeCEEEECCCCC-
Confidence 8888888887 6766 7899998765 4577765 33 379999999999964
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
|..|+++ +.+.+.+..++...... .....+++|+|||+|.+|+|+|..|...+.. |++++|.+.+.
T Consensus 126 --~~~~~i~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viG~G~~g~e~a~~l~~~g~~---V~~i~~~~~~~ 191 (319)
T 3cty_A 126 --HKHLGVK---GESEYFGKGTSYCSTCD------GYLFKGKRVVTIGGGNSGAIAAISMSEYVKN---VTIIEYMPKYM 191 (319)
T ss_dssp --ECCCCCB---TTTTTBTTTEESCHHHH------GGGGBTSEEEEECCSHHHHHHHHHHTTTBSE---EEEECSSSSCC
T ss_pred --cccCCCC---ChHHhCCceEEEEEecc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCCc---EEEEEcCCccC
Confidence 6667676 66555433344222111 2335679999999999999999999988754 99999876421
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
. .
T Consensus 192 ~---~--------------------------------------------------------------------------- 193 (319)
T 3cty_A 192 C---E--------------------------------------------------------------------------- 193 (319)
T ss_dssp S---C---------------------------------------------------------------------------
T ss_pred C---C---------------------------------------------------------------------------
Confidence 0 0
Q ss_pred ccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEc---CCc-eeeeccEEEEccCCCCCcchhccccchhhhhh
Q 014821 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVD---GQT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQDY 392 (418)
Q Consensus 323 ~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~---~g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~ 392 (418)
+.+.+.+++.+|+++.+. +..+..+ ++.+. +|+ ..+++|.||+|||+.++..+++.+...
T Consensus 194 -----~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~~~~l~~~gl~----- 263 (319)
T 3cty_A 194 -----NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVK----- 263 (319)
T ss_dssp -----HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEECCGGGTTSCCC-----
T ss_pred -----HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCccChHHHhhcccc-----
Confidence 001122233456666554 5555433 36665 665 238999999999999996544432211
Q ss_pred hcCCCCCCccceeeeeeccCcccc
Q 014821 393 LAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
-+..+.+.++..+.++.||||.
T Consensus 264 --~~~~g~i~vd~~~~t~~~~vya 285 (319)
T 3cty_A 264 --LDERGYIVVDSRQRTSVPGVYA 285 (319)
T ss_dssp --BCTTSCBCCCTTCBCSSTTEEE
T ss_pred --ccCCccEeCCCCCccCCCCEEE
Confidence 1345678887777788999986
No 26
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=99.94 E-value=2.8e-26 Score=230.36 Aligned_cols=278 Identities=16% Similarity=0.189 Sum_probs=165.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccc-cCCcceecCCccccccCCCCCCCCCCCCCCChh
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHN 77 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (418)
|.++||+|||||++|+++|..|++. +.+|+|||+++.++ |.. ..+. .+.. .+.. ....++...
T Consensus 1 M~~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~--~~~~gl~~----------~~~g-~~~~-~~~~~~~~~ 66 (472)
T 3iwa_A 1 MSLKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRIS--YGGCGIPY----------YVSG-EVSN-IESLQATPY 66 (472)
T ss_dssp ---CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-------------------------------------------
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccc--ccccccch----------hhcC-CCCc-hHHhccccc
Confidence 7788999999999999999999998 89999999987653 111 0000 0000 0000 001111122
Q ss_pred HHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEe
Q 014821 78 QVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILC 157 (418)
Q Consensus 78 ~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlA 157 (418)
++..+.+.+.+++++ .++++++|++++... + .+.+.+..++....+.||+||+|
T Consensus 67 ~~~~~~~~~~~~~gi--~~~~~~~V~~id~~~----------------------~--~v~~~~~~~g~~~~~~~d~lviA 120 (472)
T 3iwa_A 67 NVVRDPEFFRINKDV--EALVETRAHAIDRAA----------------------H--TVEIENLRTGERRTLKYDKLVLA 120 (472)
T ss_dssp --------------C--EEECSEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEEC
T ss_pred hhccCHHHHhhhcCc--EEEECCEEEEEECCC----------------------C--EEEEeecCCCCEEEEECCEEEEe
Confidence 355666777767788 788899999998765 3 34444422344468999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhh--cCCCEEEEEcCCCCHHHHHHHHhhh-cCCCCCeEE
Q 014821 158 VGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANL--VKGKRVTVVGLQKSALDIAMECTTA-NGLENPCTV 234 (418)
Q Consensus 158 tG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~VvG~G~sa~e~a~~l~~~-~~~~~~V~~ 234 (418)
||+ .|..|+++ |.+. ..+++...+.+.. ...... ..+++++|||+|.+|+|+|..|... +.. |++
T Consensus 121 tG~---~p~~p~i~---G~~~--~~v~~~~~~~~~~-~l~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~~g~~---Vtl 188 (472)
T 3iwa_A 121 LGS---KANRPPVE---GMDL--AGVTPVTNLDEAE-FVQHAISAGEVSKAVIVGGGFIGLEMAVSLADMWGID---TTV 188 (472)
T ss_dssp CCE---EECCCSCT---TTTS--BTEEECCSHHHHH-HHHHHCCTTSCSEEEEECCSHHHHHHHHHHHHHHCCE---EEE
T ss_pred CCC---CcCCCCCC---CCCC--CCEEEeCCHHHHH-HHHHHhhcCCCCEEEEECCCHHHHHHHHHHHHhcCCc---EEE
Confidence 995 47777777 6541 2243322221111 000111 3478999999999999999999988 765 999
Q ss_pred EEecCccccc-CCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcc
Q 014821 235 LYRTEHWNIP-DYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHS 313 (418)
Q Consensus 235 ~~r~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 313 (418)
+.+.+.+ .+ ... . .
T Consensus 189 v~~~~~~-l~~~~~-------~----~----------------------------------------------------- 203 (472)
T 3iwa_A 189 VELADQI-MPGFTS-------K----S----------------------------------------------------- 203 (472)
T ss_dssp ECSSSSS-STTTSC-------H----H-----------------------------------------------------
T ss_pred EEccCcc-cccccC-------H----H-----------------------------------------------------
Confidence 9998753 33 221 0 0
Q ss_pred cccccccccccccCcchhhhhccCcEEEeccC-ceeEec-Cc---EEEcCCceeeeccEEEEccCCCCCcchhccccchh
Q 014821 314 FLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE-DG---IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQT 388 (418)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~-~~---v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~ 388 (418)
+.+.+.+.+++.+|+++.+. +.+++. ++ +.+++|++ +++|.||+|||++++..+.+
T Consensus 204 ------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G~~p~~~l~~------ 264 (472)
T 3iwa_A 204 ------------LSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRT-LDADLVILAAGVSPNTQLAR------ 264 (472)
T ss_dssp ------------HHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCE-EECSEEEECSCEEECCHHHH------
T ss_pred ------------HHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCE-EEcCEEEECCCCCcCHHHHH------
Confidence 11112335566678888875 777764 32 67788988 99999999999999854333
Q ss_pred hhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 389 FQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 389 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
...+. +.++.+.++..+.++.||||.
T Consensus 265 --~~gl~~~~~g~i~vd~~~~t~~~~Iya 291 (472)
T 3iwa_A 265 --DAGLELDPRGAIIVDTRMRTSDPDIFA 291 (472)
T ss_dssp --HHTCCBCTTCCEECCTTCBCSSTTEEE
T ss_pred --hCCccCCCCCCEEECCCcccCCCCEEE
Confidence 22232 346778888777778999986
No 27
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.93 E-value=4.1e-25 Score=224.12 Aligned_cols=264 Identities=16% Similarity=0.219 Sum_probs=187.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
..+||+|||||++|+++|.+|++.|++++|+|+ .+||.|....... .+. ...+....++..
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~--~~GG~~~~~~~~~---------~~~--------~~~~~~~~~l~~ 271 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGE--RFGGQVLDTVDIE---------NYI--------SVPKTEGQKLAG 271 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECS--STTGGGTTCSCBC---------CBT--------TBSSBCHHHHHH
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCeEEEEEC--CCCCccccccccc---------ccC--------CCCCCCHHHHHH
Confidence 468999999999999999999999999999987 4788876522100 010 111245678899
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++.+.++++++ .+..+++|.+++... + .++.|.|.+.++ .++.||+||+|||+.
T Consensus 272 ~l~~~~~~~gv--~v~~~~~v~~i~~~~--~-----------------~~~~~~V~~~~g-----~~~~~d~vVlAtG~~ 325 (521)
T 1hyu_A 272 ALKAHVSDYDV--DVIDSQSASKLVPAA--T-----------------EGGLHQIETASG-----AVLKARSIIIATGAK 325 (521)
T ss_dssp HHHHHHHTSCE--EEECSCCEEEEECCS--S-----------------TTSCEEEEETTS-----CEEEEEEEEECCCEE
T ss_pred HHHHHHHHcCC--EEEcCCEEEEEEecc--C-----------------CCceEEEEECCC-----CEEEcCEEEECCCCC
Confidence 99999999998 888888999998643 0 023588887765 479999999999965
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcc
Q 014821 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (418)
Q Consensus 162 ~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~ 241 (418)
|..|.++ |.+.+.+..++.+..+. .....+++|+|||+|.+|+|+|..|...+.. |+++.|.+.+
T Consensus 326 ---~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~V~ViGgG~~g~E~A~~L~~~g~~---Vtlv~~~~~l 390 (521)
T 1hyu_A 326 ---WRNMNVP---GEDQYRTKGVTYCPHCD------GPLFKGKRVAVIGGGNSGVEAAIDLAGIVEH---VTLLEFAPEM 390 (521)
T ss_dssp ---ECCCCCT---TTTTTTTTTEECCTTCC------GGGGBTSEEEEECCSHHHHHHHHHHHHHBSE---EEEECSSSSC
T ss_pred ---cCCCCCC---ChhhhcCceEEEeecCc------hhhcCCCeEEEECCCHHHHHHHHHHHhhCCE---EEEEEeCccc
Confidence 5666666 77666554455444332 2345689999999999999999999988765 9999987753
Q ss_pred cccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccc
Q 014821 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (418)
Q Consensus 242 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (418)
. + .
T Consensus 391 ~-~--~-------------------------------------------------------------------------- 393 (521)
T 1hyu_A 391 K-A--D-------------------------------------------------------------------------- 393 (521)
T ss_dssp C-S--C--------------------------------------------------------------------------
T ss_pred C-c--C--------------------------------------------------------------------------
Confidence 1 1 0
Q ss_pred cccccCcchhhhhcc-CcEEEeccC-ceeEecC-----cEEEcC---Cc-eeeeccEEEEccCCCCCcchhccccchhhh
Q 014821 322 LTITVPEKFYDKVEE-GSIILKKSQ-DFSFCED-----GIVVDG---QT-TPLKTDLVILATGFKGDVKLKNIFLSQTFQ 390 (418)
Q Consensus 322 ~~~~~~~~~~~~~~~-~~v~~~~~~-v~~~~~~-----~v~~~~---g~-~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~ 390 (418)
..+.+.+++ .+|+++.+. +..+..+ ++.+.+ |+ ..+++|.||+|+|++|+..++ .
T Consensus 394 ------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~pn~~~l--------~ 459 (521)
T 1hyu_A 394 ------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLPNTHWL--------E 459 (521)
T ss_dssp ------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEESCGGG--------T
T ss_pred ------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCCCchHH--------h
Confidence 001123343 578888875 6677643 356653 54 238999999999999985433 2
Q ss_pred hhhcCCCCCCccceeeeeeccCcccc
Q 014821 391 DYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..+.-+..+.+.++..+.++.||||.
T Consensus 460 ~~l~~~~~G~I~Vd~~~~ts~p~VfA 485 (521)
T 1hyu_A 460 GALERNRMGEIIIDAKCETSVKGVFA 485 (521)
T ss_dssp TTSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred hhhccCCCCcEEeCCCCCCCCCCEEE
Confidence 22211446778888777788999986
No 28
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.93 E-value=1.3e-25 Score=213.05 Aligned_cols=176 Identities=20% Similarity=0.239 Sum_probs=119.3
Q ss_pred CC--CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 1 ME--KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 1 m~--~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
|. .|||+|||||+||+++|..|++.|++|+|||+ ..+||.+.....- ..+.. .......+
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~-~~~gG~~~~~~~i---------~~~p~--------~~~~~~~~ 63 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIER-GIPGGQMANTEEV---------ENFPG--------FEMITGPD 63 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTGGGGGCSCB---------CCSTT--------CSSBCHHH
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEec-CCCCCeeeccccc---------CCcCC--------ccccchHH
Confidence 54 48999999999999999999999999999998 5688876541110 00110 11223456
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+.........++.. .+.....+....... ..+...++ .++.||+|||||
T Consensus 64 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~------------------------~~~~~~~~-----~~~~~d~liiAt 112 (312)
T 4gcm_A 64 LSTKMFEHAKKFGA--VYQYGDIKSVEDKGE------------------------YKVINFGN-----KELTAKAVIIAT 112 (312)
T ss_dssp HHHHHHHHHHHTTC--EEEECCCCEEEECSS------------------------CEEEECSS-----CEEEEEEEEECC
T ss_pred HHHHHHHHHhhccc--cccceeeeeeeeeec------------------------ceeeccCC-----eEEEeceeEEcc
Confidence 66666666666655 444444443333222 22333333 589999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|+ .|..|++| |.+.+.+..++....++ ....++++|+|||+|.+|+|+|..|...+.. |+++.|.
T Consensus 113 Gs---~~~~~~ip---G~~~~~~~~v~~~~~~~------~~~~~~k~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~ 177 (312)
T 4gcm_A 113 GA---EYKKIGVP---GEQELGGRGVSYCAVCD------GAFFKNKRLFVIGGGDSAVEEGTFLTKFADK---VTIVHRR 177 (312)
T ss_dssp CE---EECCCCCT---TTTTTBTTTEESCHHHH------GGGGTTCEEEEECCSHHHHHHHHHHTTTCSE---EEEECSS
T ss_pred cC---ccCcCCCC---ChhhhCCccEEeeeccC------ccccCCCEEEEECCCHHHHHHHHHHHhcCCE---EEEEecc
Confidence 95 47778788 87766554454333221 3446689999999999999999999888765 9999998
Q ss_pred Cc
Q 014821 239 EH 240 (418)
Q Consensus 239 ~~ 240 (418)
+.
T Consensus 178 ~~ 179 (312)
T 4gcm_A 178 DE 179 (312)
T ss_dssp SS
T ss_pred cc
Confidence 75
No 29
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.93 E-value=9.3e-26 Score=214.02 Aligned_cols=185 Identities=18% Similarity=0.307 Sum_probs=124.9
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHH
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (418)
|+ ++||+|||||+||++||..|++.|++++|||+.. .||.+.. + ++........+..+ .......++
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~-~gg~~~~---G-~~~~~~~i~~~~g~-------~~~i~~~~l 68 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFM-AGGVAAG---G-QLTTTTIIENFPGF-------PNGIDGNEL 68 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSS-GGGCCTT---C-GGGGSSEECCSTTC-------TTCEEHHHH
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCC-CCCcccC---C-CcCChHHhhhccCC-------cccCCHHHH
Confidence 65 4899999999999999999999999999999964 4443322 0 11111111111111 122345678
Q ss_pred HHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeec
Q 014821 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 80 ~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
..++.+.+.+++. .+.. ..+....... ..+.+.+.+. .++.||+||+|||
T Consensus 69 ~~~~~~~~~~~~~--~~~~-~~v~~~~~~~----------------------~~~~~~~~~~-----~~~~~~~liiATG 118 (314)
T 4a5l_A 69 MMNMRTQSEKYGT--TIIT-ETIDHVDFST----------------------QPFKLFTEEG-----KEVLTKSVIIATG 118 (314)
T ss_dssp HHHHHHHHHHTTC--EEEC-CCEEEEECSS----------------------SSEEEEETTC-----CEEEEEEEEECCC
T ss_pred HHHHHHHHhhcCc--EEEE-eEEEEeecCC----------------------CceEEEECCC-----eEEEEeEEEEccc
Confidence 8888888888886 4443 4555555444 3455555554 5899999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 160 RFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 160 ~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
+ .|+.|++| |.+.+....++...++... ....++++|+|||+|.+|+|+|..|...|.. |+++.|..
T Consensus 119 ~---~~~~~~ip---G~~~~~~~~~~~~~~~~~~----~~~~~~~~vvViGgG~ig~e~A~~l~~~G~~---Vt~v~~~~ 185 (314)
T 4a5l_A 119 A---TAKRMHVP---GEDKYWQNGVSACAICDGA----VPIFRNKVLMVVGGGDAAMEEALHLTKYGSK---VIILHRRD 185 (314)
T ss_dssp E---EECCCCCT---THHHHBTTTEESCHHHHTT----SGGGTTSEEEEECSSHHHHHHHHHHTTTSSE---EEEECSSS
T ss_pred c---cccccCCC---ccccccccceeeehhhhhh----hhhcCCCeEEEECCChHHHHHHHHHHHhCCe---eeeecccc
Confidence 5 47777777 7665443344433322211 2345689999999999999999999998865 99999876
Q ss_pred c
Q 014821 240 H 240 (418)
Q Consensus 240 ~ 240 (418)
.
T Consensus 186 ~ 186 (314)
T 4a5l_A 186 A 186 (314)
T ss_dssp S
T ss_pred c
Confidence 4
No 30
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=99.93 E-value=9.5e-26 Score=232.49 Aligned_cols=276 Identities=17% Similarity=0.187 Sum_probs=185.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
|.++||+|||||++|+++|..|++. +.+|+|||+++.++. .. ..+ | +.+. ....+....
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~--~~----~~l--p---~~~~--------g~~~~~~~~ 94 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISF--AN----CGL--P---YYIG--------GVITERQKL 94 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSB--CG----GGH--H---HHHT--------TSSCCGGGG
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccc--cC----CCC--c---hhhc--------CcCCChHHh
Confidence 5578999999999999999999998 889999999876541 11 000 0 0000 011122234
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+..+++++.+++++ .++++++|++++... + .+.+.+..++...++.||+||+||
T Consensus 95 ~~~~~~~~~~~~gi--~v~~~~~V~~id~~~----------------------~--~v~v~~~~~g~~~~~~~d~lviAt 148 (588)
T 3ics_A 95 LVQTVERMSKRFNL--DIRVLSEVVKINKEE----------------------K--TITIKNVTTNETYNEAYDVLILSP 148 (588)
T ss_dssp BSSCHHHHHHHTTC--EEECSEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEECC
T ss_pred hccCHHHHHHhcCc--EEEECCEEEEEECCC----------------------C--EEEEeecCCCCEEEEeCCEEEECC
Confidence 55677888888898 788999999998765 3 344443223445689999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhh-hhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEe
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-AANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r 237 (418)
|+ .|..|+++ |.+...+ +++...+....... .-....+++|+|||+|.+|+|+|..|...+.. |+++.+
T Consensus 149 G~---~p~~p~i~---G~~~~~~-v~~~~~~~~~~~~~~~l~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~ 218 (588)
T 3ics_A 149 GA---KPIVPSIP---GIEEAKA-LFTLRNVPDTDRIKAYIDEKKPRHATVIGGGFIGVEMVENLRERGIE---VTLVEM 218 (588)
T ss_dssp CE---EECCCCCT---TTTTCTT-EEECSSHHHHHHHHHHHHHHCCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECS
T ss_pred CC---CCCCCCCC---CcccCCC-eEEeCCHHHHHHHHHHHhhcCCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEec
Confidence 95 47777777 6633322 44433222111000 00124689999999999999999999998765 999998
Q ss_pred cCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccc
Q 014821 238 TEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQE 317 (418)
Q Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (418)
.+. +.+... . .
T Consensus 219 ~~~-~l~~~~-------~----~--------------------------------------------------------- 229 (588)
T 3ics_A 219 ANQ-VMPPID-------Y----E--------------------------------------------------------- 229 (588)
T ss_dssp SSS-SCTTSC-------H----H---------------------------------------------------------
T ss_pred CCc-ccccCC-------H----H---------------------------------------------------------
Confidence 875 333222 0 0
Q ss_pred cccccccccCcchhhhhccCcEEEeccC-ceeEec--CcEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhc
Q 014821 318 LSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (418)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~ 394 (418)
+.+.+.+.+++.+|+++.+. +..++. ++|.+++|++ +++|.||+|||++++..+++.++...
T Consensus 230 --------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~~~g~~-i~~D~Vi~a~G~~p~~~~l~~~g~~~------ 294 (588)
T 3ics_A 230 --------MAAYVHEHMKNHDVELVFEDGVDALEENGAVVRLKSGSV-IQTDMLILAIGVQPESSLAKGAGLAL------ 294 (588)
T ss_dssp --------HHHHHHHHHHHTTCEEECSCCEEEEEGGGTEEEETTSCE-EECSEEEECSCEEECCHHHHHTTCCB------
T ss_pred --------HHHHHHHHHHHcCCEEEECCeEEEEecCCCEEEECCCCE-EEcCEEEEccCCCCChHHHHhcCceE------
Confidence 01112234566678888875 777765 5699999998 99999999999999965433322221
Q ss_pred CCCCCCccceeeeeeccCcccc
Q 014821 395 GSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+.++.+.++..+.++.||||.
T Consensus 295 -~~~g~i~vd~~~~t~~~~IyA 315 (588)
T 3ics_A 295 -GVRGTIKVNEKFQTSDPHIYA 315 (588)
T ss_dssp -CGGGCBCCCTTSBCSSTTEEE
T ss_pred -cCCCCEEECCccccCCCCEEE
Confidence 335677787777778999985
No 31
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=99.93 E-value=1.9e-25 Score=220.56 Aligned_cols=263 Identities=17% Similarity=0.148 Sum_probs=174.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCc--eEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFH--PIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~--v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++||||||||++|+++|..|++.|.+ |+|||+.+..+..... + +. .+. ........+.
T Consensus 9 ~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~------l--~~---~~~---------~~~~~~~~~~ 68 (415)
T 3lxd_A 9 RADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPP------L--SK---EYL---------AREKTFERIC 68 (415)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGG------G--GT---TTT---------TTSSCSGGGB
T ss_pred CCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCccc------C--CH---HHH---------cCCCCHHHhc
Confidence 47999999999999999999999886 9999998644211000 0 00 000 0000111222
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.+......+.++ .+..+++|..++... +.|.+.++ ..+.||+||+|||+
T Consensus 69 ~~~~~~~~~~~i--~~~~~~~v~~id~~~------------------------~~v~~~~g-----~~~~~d~lvlAtG~ 117 (415)
T 3lxd_A 69 IRPAQFWEDKAV--EMKLGAEVVSLDPAA------------------------HTVKLGDG-----SAIEYGKLIWATGG 117 (415)
T ss_dssp SSCHHHHHHTTE--EEEETCCEEEEETTT------------------------TEEEETTS-----CEEEEEEEEECCCE
T ss_pred cCCHHHHHHCCc--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEEeeEEEEccCC
Confidence 223344456787 788888999998765 56777666 58999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhh--hhhhhcC-CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEe
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYE--AAANLVK-GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r 237 (418)
.|..|+++ |.+. ..+.. +....+. ....... +++|+|||+|.+|+|+|..|...+.. |+++.+
T Consensus 118 ---~~~~~~i~---g~~~--~~v~~---~~~~~d~~~l~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~ 183 (415)
T 3lxd_A 118 ---DPRRLSCV---GADL--AGVHA---VRTKEDADRLMAELDAGAKNAVVIGGGYIGLEAAAVLTKFGVN---VTLLEA 183 (415)
T ss_dssp ---ECCCCBTT---SSCC--BTEEC---CCSHHHHHHHHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEES
T ss_pred ---ccCCCCCC---Cccc--cCEEE---EcCHHHHHHHHHHhhhcCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEec
Confidence 47777777 6542 12222 1111111 1122334 89999999999999999999998765 999999
Q ss_pred cCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccc
Q 014821 238 TEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQE 317 (418)
Q Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (418)
.+.++..... ..
T Consensus 184 ~~~~l~~~~~-----------~~--------------------------------------------------------- 195 (415)
T 3lxd_A 184 LPRVLARVAG-----------EA--------------------------------------------------------- 195 (415)
T ss_dssp SSSTTTTTSC-----------HH---------------------------------------------------------
T ss_pred CCchhhhhcC-----------HH---------------------------------------------------------
Confidence 8863322111 00
Q ss_pred cccccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhh
Q 014821 318 LSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (418)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~ 391 (418)
+.+.+.+.+++.+|+++.+. +..+..+ +|.+++|++ +++|.||+|+|++|+..+ +..
T Consensus 196 --------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~-i~aD~Vv~a~G~~p~~~l--------~~~ 258 (415)
T 3lxd_A 196 --------LSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSV-IPADIVIVGIGIVPCVGA--------LIS 258 (415)
T ss_dssp --------HHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCE-EECSEEEECSCCEESCHH--------HHH
T ss_pred --------HHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCE-EEcCEEEECCCCccChHH--------HHh
Confidence 11112345566778888775 7777643 478889998 999999999999999543 344
Q ss_pred hhcCCCCCCccceeeeeeccCcccc
Q 014821 392 YLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..+... +++.++..+.++.||||.
T Consensus 259 ~gl~~~-~gi~vd~~~~t~~~~iyA 282 (415)
T 3lxd_A 259 AGASGG-NGVDVDEFCRTSLTDVYA 282 (415)
T ss_dssp TTCCCS-SSEECCTTCBCSSTTEEE
T ss_pred CCCCcC-CCEEECCCCCcCCCCEEE
Confidence 444333 347787777778999985
No 32
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=99.93 E-value=7.8e-26 Score=224.59 Aligned_cols=268 Identities=16% Similarity=0.135 Sum_probs=177.7
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
+|||||||++|+++|..|++.|. +|+|||+++..+... .. .|. .+....... ...... .
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~------~~--l~~---~~~~~~~~~--~~~~~~------~ 62 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFAN------CA--LPY---VIGEVVEDR--RYALAY------T 62 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCG------GG--HHH---HHTTSSCCG--GGTBCC------C
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCc------ch--hHH---HHcCCccch--hhhhhc------C
Confidence 69999999999999999999874 799999976443210 00 000 000000000 000000 1
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
.+...+++++ .++.+++|+.++... ..+.+....++....+.||+||||||+
T Consensus 63 ~~~~~~~~~i--~~~~~~~V~~id~~~------------------------~~~~~~~~~~~~~~~~~yd~lVIATGs-- 114 (437)
T 4eqs_A 63 PEKFYDRKQI--TVKTYHEVIAINDER------------------------QTVSVLNRKTNEQFEESYDKLILSPGA-- 114 (437)
T ss_dssp HHHHHHHHCC--EEEETEEEEEEETTT------------------------TEEEEEETTTTEEEEEECSEEEECCCE--
T ss_pred HHHHHHhcCC--EEEeCCeEEEEEccC------------------------cEEEEEeccCCceEEEEcCEEEECCCC--
Confidence 1233455677 788889999998765 345555555566678999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
.|+.|+++ +...+.. ++....... .......++++++|||+|.+|+|+|..+...+.. |+++.+.++.
T Consensus 115 -~p~~p~i~---g~~~~~~---~~~~~~~~l-~~~~~~~~~~~vvViGgG~ig~E~A~~l~~~g~~---Vtlv~~~~~l- 182 (437)
T 4eqs_A 115 -SANSLGFE---SDITFTL---RNLEDTDAI-DQFIKANQVDKVLVVGAGYVSLEVLENLYERGLH---PTLIHRSDKI- 182 (437)
T ss_dssp -EECCCCCC---CTTEECC---SSHHHHHHH-HHHHHHHTCCEEEEECCSHHHHHHHHHHHHHTCE---EEEEESSSCC-
T ss_pred -cccccccc---CceEEee---ccHHHHHHH-HHhhhccCCcEEEEECCccchhhhHHHHHhcCCc---ceeeeeeccc-
Confidence 47788777 6433211 110000000 0011234578999999999999999999999875 9999998863
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
++...
T Consensus 183 l~~~d--------------------------------------------------------------------------- 187 (437)
T 4eqs_A 183 NKLMD--------------------------------------------------------------------------- 187 (437)
T ss_dssp STTSC---------------------------------------------------------------------------
T ss_pred ccccc---------------------------------------------------------------------------
Confidence 33322
Q ss_pred ccccCcchhhhhccCcEEEeccC-ceeEecCcEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcC-CCCCC
Q 014821 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEK 400 (418)
Q Consensus 323 ~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~ 400 (418)
+...+.+.+.+++.+|+++.+. +..++.+.+.+++|++ +++|.||+|+|.+|+..+++ ...+. +.++.
T Consensus 188 -~~~~~~~~~~l~~~gV~i~~~~~v~~~~~~~v~~~~g~~-~~~D~vl~a~G~~Pn~~~~~--------~~gl~~~~~G~ 257 (437)
T 4eqs_A 188 -ADMNQPILDELDKREIPYRLNEEINAINGNEITFKSGKV-EHYDMIIEGVGTHPNSKFIE--------SSNIKLDRKGF 257 (437)
T ss_dssp -GGGGHHHHHHHHHTTCCEEESCCEEEEETTEEEETTSCE-EECSEEEECCCEEESCGGGT--------TSSCCCCTTSC
T ss_pred -chhHHHHHHHhhccceEEEeccEEEEecCCeeeecCCeE-EeeeeEEEEeceecCcHHHH--------hhhhhhccCCc
Confidence 0011223345566678888886 8889999999999999 99999999999999854333 33332 44677
Q ss_pred ccceeeeeeccCcccc
Q 014821 401 LPLYRSAHIYIDTLTY 416 (418)
Q Consensus 401 ~~~~~~~~~~~~~~~~ 416 (418)
+.++..+.++.||||.
T Consensus 258 I~vd~~~~Ts~p~IyA 273 (437)
T 4eqs_A 258 IPVNDKFETNVPNIYA 273 (437)
T ss_dssp EECCTTCBCSSTTEEE
T ss_pred EecCCCccCCCCCEEE
Confidence 8888888889999995
No 33
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=99.93 E-value=2.5e-25 Score=222.02 Aligned_cols=268 Identities=18% Similarity=0.239 Sum_probs=168.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
|+++||+|||||++|+++|..|++. +.+|+|||+.+.++.... ..|.. .........
T Consensus 1 M~~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~~~~~~~--------~~p~~-------------~~~~~~~~~ 59 (449)
T 3kd9_A 1 MSLKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEWVSHAPC--------GIPYV-------------VEGLSTPDK 59 (449)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSCCC---------------------------------------
T ss_pred CCcCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCccccCCc--------CCccc-------------cCCCCCHHH
Confidence 8889999999999999999999997 789999999875542110 00000 000011122
Q ss_pred HHHH-HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEe
Q 014821 79 VLDY-IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILC 157 (418)
Q Consensus 79 ~~~~-l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlA 157 (418)
+..+ .+.+.+++++ .+.++++|++++... +.|.+.++ ..++.||+||+|
T Consensus 60 ~~~~~~~~~~~~~gi--~v~~~~~v~~i~~~~------------------------~~v~~~~g----~~~~~~d~lviA 109 (449)
T 3kd9_A 60 LMYYPPEVFIKKRGI--DLHLNAEVIEVDTGY------------------------VRVRENGG----EKSYEWDYLVFA 109 (449)
T ss_dssp ------CTHHHHTTC--EEETTCEEEEECSSE------------------------EEEECSSS----EEEEECSEEEEC
T ss_pred hhhcCHHHHHHhcCc--EEEecCEEEEEecCC------------------------CEEEECCc----eEEEEcCEEEEC
Confidence 2222 2334467788 789988999987544 66654333 257999999999
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhh--hcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEE
Q 014821 158 VGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAAN--LVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVL 235 (418)
Q Consensus 158 tG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~ 235 (418)
||+ .|..|+++ |.+.. .++......... ..... ...+++++|||+|.+|+|+|..|...+.. |+++
T Consensus 110 tG~---~p~~p~i~---G~~~~--~v~~~~~~~~~~-~~~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv 177 (449)
T 3kd9_A 110 NGA---SPQVPAIE---GVNLK--GVFTADLPPDAL-AIREYMEKYKVENVVIIGGGYIGIEMAEAFAAQGKN---VTMI 177 (449)
T ss_dssp CCE---EECCCSCB---TTTST--TEECSCSTHHHH-HHHHHHSSSCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEE
T ss_pred CCC---CCCCCCCC---CCCCC--CEEEeCCHHHHH-HHHHHHHhcCCCeEEEECCCHHHHHHHHHHHhCCCe---EEEE
Confidence 995 47777777 65421 133222111110 00111 12678999999999999999999998765 9999
Q ss_pred EecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccc
Q 014821 236 YRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFL 315 (418)
Q Consensus 236 ~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (418)
.|.+.++..... ..
T Consensus 178 ~~~~~~l~~~~~-----------~~------------------------------------------------------- 191 (449)
T 3kd9_A 178 VRGERVLRRSFD-----------KE------------------------------------------------------- 191 (449)
T ss_dssp ESSSSTTTTTSC-----------HH-------------------------------------------------------
T ss_pred EcCCccchhhcC-----------HH-------------------------------------------------------
Confidence 998863322122 00
Q ss_pred cccccccccccCcchhhhhccCcEEEeccC-ceeEecCc---EEEcCCceeeeccEEEEccCCCCCcchhccccchhhhh
Q 014821 316 QELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG---IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQD 391 (418)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~---v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~ 391 (418)
+.+.+.+.+++. |+++.+. +..++.++ ..+.+|++ +++|.||+|||++|+..+++.++...
T Consensus 192 ----------~~~~l~~~l~~~-v~i~~~~~v~~i~~~~~v~~v~~~g~~-i~~D~Vv~a~G~~p~~~l~~~~gl~~--- 256 (449)
T 3kd9_A 192 ----------VTDILEEKLKKH-VNLRLQEITMKIEGEERVEKVVTDAGE-YKAELVILATGIKPNIELAKQLGVRI--- 256 (449)
T ss_dssp ----------HHHHHHHHHTTT-SEEEESCCEEEEECSSSCCEEEETTEE-EECSEEEECSCEEECCHHHHHTTCCB---
T ss_pred ----------HHHHHHHHHHhC-cEEEeCCeEEEEeccCcEEEEEeCCCE-EECCEEEEeeCCccCHHHHHhCCccC---
Confidence 001122344555 7777765 66666542 34567877 99999999999999965433322221
Q ss_pred hhcCCCCCCccceeeeeeccCcccc
Q 014821 392 YLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+.++.+.++..+.++.||||.
T Consensus 257 ----~~~G~i~vd~~~~t~~~~IyA 277 (449)
T 3kd9_A 257 ----GETGAIWTNEKMQTSVENVYA 277 (449)
T ss_dssp ----CTTSSBCCCTTCBCSSTTEEE
T ss_pred ----CCCCCEEECCCCccCCCCEEE
Confidence 345678888777789999985
No 34
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=99.92 E-value=7.2e-25 Score=218.82 Aligned_cols=269 Identities=13% Similarity=0.130 Sum_probs=173.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
|. +||+|||||++|+++|..|++. +.+|+|||+++.+|..... .+ .+. ...+.....
T Consensus 1 M~-~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~~-~~-----------~~~--------~~~~~~~~~ 59 (452)
T 3oc4_A 1 MS-LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSGG-LS-----------AYF--------NHTINELHE 59 (452)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC-----------------------------------
T ss_pred CC-CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCcc-ch-----------hhh--------cCCCCCHHH
Confidence 54 6999999999999999999998 8899999998866521000 00 000 000000011
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+..+......++++ .++++++|++++... +.+.+... +...++.||+||+||
T Consensus 60 ~~~~~~~~~~~~gi--~~~~~~~V~~id~~~----------------------~~v~v~~~----~~~~~~~~d~lviAt 111 (452)
T 3oc4_A 60 ARYITEEELRRQKI--QLLLNREVVAMDVEN----------------------QLIAWTRK----EEQQWYSYDKLILAT 111 (452)
T ss_dssp -CCCCHHHHHHTTE--EEECSCEEEEEETTT----------------------TEEEEEET----TEEEEEECSEEEECC
T ss_pred hhcCCHHHHHHCCC--EEEECCEEEEEECCC----------------------CEEEEEec----CceEEEEcCEEEECC
Confidence 11112333456777 788899999998765 44544411 233689999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|+ .|..|+++ |.+. ..+++...+..... .......+++++|||+|.+|+|+|..|...+.. |+++.|.
T Consensus 112 G~---~p~~p~i~---g~~~--~~v~~~~~~~~~~~-~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~ 179 (452)
T 3oc4_A 112 GA---SQFSTQIR---GSQT--EKLLKYKFLSGALA-AVPLLENSQTVAVIGAGPIGMEAIDFLVKMKKT---VHVFESL 179 (452)
T ss_dssp CC---CBCCCCCB---TTTC--TTEEEGGGCC-----CCHHHHTCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred Cc---ccCCCCCC---CCCC--CCEEEeCCHHHHHH-HHHHHhcCCEEEEECCCHHHHHHHHHHHhCCCe---EEEEEcc
Confidence 95 57777777 6543 23555443322110 012335689999999999999999999988765 9999998
Q ss_pred CcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccc
Q 014821 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (418)
Q Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (418)
+.++..... . .
T Consensus 180 ~~~l~~~~d-------~----~---------------------------------------------------------- 190 (452)
T 3oc4_A 180 ENLLPKYFD-------K----E---------------------------------------------------------- 190 (452)
T ss_dssp SSSSTTTCC-------H----H----------------------------------------------------------
T ss_pred CccccccCC-------H----H----------------------------------------------------------
Confidence 863322121 0 0
Q ss_pred ccccccccCcchhhhhccCcEEEeccC-ceeEe--cCc--EEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhh
Q 014821 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFC--EDG--IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (418)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~--~~~--v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~ 393 (418)
+.+.+.+.+++.+|+++.+. +..++ +++ |.+++| + +++|.||+|||++|+..+++ ..+
T Consensus 191 -------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~-i~aD~Vv~A~G~~p~~~~l~--------~~~ 253 (452)
T 3oc4_A 191 -------MVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-E-ISCDSGIFALNLHPQLAYLD--------KKI 253 (452)
T ss_dssp -------HHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-E-EEESEEEECSCCBCCCSSCC--------TTS
T ss_pred -------HHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-E-EEeCEEEECcCCCCChHHHH--------hhh
Confidence 11122345567788998876 77776 333 556666 6 99999999999999965432 111
Q ss_pred cCCCCCCccceeeeeeccCcccc
Q 014821 394 AGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.-+.++.+.++..+.++.||||.
T Consensus 254 ~~~~~g~i~vd~~~~t~~~~IyA 276 (452)
T 3oc4_A 254 QRNLDQTIAVDAYLQTSVPNVFA 276 (452)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEE
T ss_pred ccCCCCCEEECcCccCCCCCEEE
Confidence 11456778888877788999985
No 35
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=99.92 E-value=2.3e-25 Score=219.26 Aligned_cols=264 Identities=14% Similarity=0.163 Sum_probs=171.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
+++|+|||||++|+++|..|++.|. +|+|||+.+..... . + .+ +.. +....... ..+.
T Consensus 1 ~k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~--~--~--~l--~~~---~l~~~~~~---------~~~~ 60 (404)
T 3fg2_P 1 NDTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQ--R--P--PL--SKA---YLKSGGDP---------NSLM 60 (404)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBC--S--G--GG--GTG---GGGSCCCT---------TSSB
T ss_pred CCCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCC--C--c--cC--CHH---HHCCCCCH---------HHcc
Confidence 4789999999999999999999998 89999998743211 0 0 00 000 00000000 0111
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.+......++++ .+.. ++|+.++... ..|.+.++ .++.||+||+|||+
T Consensus 61 ~~~~~~~~~~~i--~~~~-~~v~~id~~~------------------------~~v~~~~g-----~~~~~d~lvlAtG~ 108 (404)
T 3fg2_P 61 FRPEKFFQDQAI--ELIS-DRMVSIDREG------------------------RKLLLASG-----TAIEYGHLVLATGA 108 (404)
T ss_dssp SSCHHHHHHTTE--EEEC-CCEEEEETTT------------------------TEEEESSS-----CEEECSEEEECCCE
T ss_pred CCCHHHHHhCCC--EEEE-EEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEeeCC
Confidence 112233445677 6777 8999998665 45777666 58999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.|..|+++ |.+. ..++......+. .........+++++|||+|.+|+|+|..|...+.. |+++.+.+.
T Consensus 109 ---~p~~~~i~---g~~~--~~v~~~~~~~d~-~~l~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtvv~~~~~ 176 (404)
T 3fg2_P 109 ---RNRMLDVP---NASL--PDVLYLRTLDES-EVLRQRMPDKKHVVVIGAGFIGLEFAATARAKGLE---VDVVELAPR 176 (404)
T ss_dssp ---EECCCCST---TTTS--TTEECCSSHHHH-HHHHHHGGGCSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred ---CccCCCCC---CCCC--CcEEEECCHHHH-HHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCc
Confidence 47777777 6432 123321111110 01112344689999999999999999999988765 999999875
Q ss_pred ccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccc
Q 014821 241 WNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSS 320 (418)
Q Consensus 241 ~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 320 (418)
++..... ..
T Consensus 177 ~~~~~~~-----------~~------------------------------------------------------------ 185 (404)
T 3fg2_P 177 VMARVVT-----------PE------------------------------------------------------------ 185 (404)
T ss_dssp TTTTTSC-----------HH------------------------------------------------------------
T ss_pred chhhccC-----------HH------------------------------------------------------------
Confidence 4322111 00
Q ss_pred ccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhc
Q 014821 321 CLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (418)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~ 394 (418)
+.+.+.+.+++.+|+++.+. +..++.+ +|.+++|++ +++|.||+|||++++..++ +...+
T Consensus 186 -----~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~-i~aD~Vv~a~G~~p~~~l~--------~~~gl 251 (404)
T 3fg2_P 186 -----ISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNT-LPCDLVVVGVGVIPNVEIA--------AAAGL 251 (404)
T ss_dssp -----HHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCE-EECSEEEECCCEEECCHHH--------HHTTC
T ss_pred -----HHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCE-EEcCEEEECcCCccCHHHH--------HhCCC
Confidence 11122345566788888885 7777643 478899998 9999999999999995443 33333
Q ss_pred CCCCCCccceeeeeeccCcccc
Q 014821 395 GSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
...++ +.++..+.++.||||.
T Consensus 252 ~~~~G-i~vd~~~~t~~~~iya 272 (404)
T 3fg2_P 252 PTAAG-IIVDQQLLTSDPHISA 272 (404)
T ss_dssp CBSSS-EEECTTSBCSSTTEEE
T ss_pred CCCCC-EEECCCcccCCCCEEE
Confidence 23333 7777777778999985
No 36
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=99.92 E-value=3.2e-25 Score=227.58 Aligned_cols=270 Identities=19% Similarity=0.203 Sum_probs=176.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
+||+|||||++|+++|..|++. +.+|+|||+++.++.. . ..+ | +.+. ....+....+.+
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~--~----~~l--~---~~~~--------~~~~~~~~~~~~ 62 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFA--N----CGL--P---YHIS--------GEIAQRSALVLQ 62 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBC--G----GGH--H---HHHT--------SSSCCGGGGBCC
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCcccc--c----cCc--h---HHhc--------CCcCChHHhhcc
Confidence 7899999999999999999997 7899999998765411 0 000 0 0000 011112234455
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++..+.+++++ .++++++|++++... + .+.+.+..++...++.||+||+|||+
T Consensus 63 ~~~~~~~~~~i--~~~~~~~V~~id~~~----------------------~--~v~~~~~~~g~~~~~~~d~lviAtG~- 115 (565)
T 3ntd_A 63 TPESFKARFNV--EVRVKHEVVAIDRAA----------------------K--LVTVRRLLDGSEYQESYDTLLLSPGA- 115 (565)
T ss_dssp CHHHHHHHHCC--EEETTEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEECCCE-
T ss_pred CHHHHHHhcCc--EEEECCEEEEEECCC----------------------C--EEEEEecCCCCeEEEECCEEEECCCC-
Confidence 66777777888 788999999998765 3 34444433344568999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhh--hhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAA--NLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 162 ~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.|..|+++ |.+.. .+++...+.... .... ....+++|+|||+|.+|+|+|..|...+.. |+++.|.+
T Consensus 116 --~p~~p~ip---G~~~~--~v~~~~~~~~~~-~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~~~ 184 (565)
T 3ntd_A 116 --APIVPPIP---GVDNP--LTHSLRNIPDMD-RILQTIQMNNVEHATVVGGGFIGLEMMESLHHLGIK---TTLLELAD 184 (565)
T ss_dssp --EECCCCCT---TCCST--TEECCSSHHHHH-HHHHHHHHTTCSEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred --CCCCCCCC---CCCCC--CEEEeCCHHHHH-HHHHHHhhCCCCEEEEECCCHHHHHHHHHHHhcCCc---EEEEEcCC
Confidence 47777777 66432 233322211111 0000 224578999999999999999999988765 99999987
Q ss_pred cccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccc
Q 014821 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (418)
Q Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 319 (418)
. +.+... ..+.
T Consensus 185 ~-~l~~~~-----------~~~~--------------------------------------------------------- 195 (565)
T 3ntd_A 185 Q-VMTPVD-----------REMA--------------------------------------------------------- 195 (565)
T ss_dssp S-SCTTSC-----------HHHH---------------------------------------------------------
T ss_pred c-cchhcC-----------HHHH---------------------------------------------------------
Confidence 5 333222 0000
Q ss_pred cccccccCcchhhhhccCcEEEeccC-ceeEec---------------------C--cEEEcCCceeeeccEEEEccCCC
Q 014821 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE---------------------D--GIVVDGQTTPLKTDLVILATGFK 375 (418)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~---------------------~--~v~~~~g~~~~~~D~Vi~atG~~ 375 (418)
..+.+.+++.+|+++.+. +..++. + .+.+++|++ +++|.||+|||++
T Consensus 196 --------~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~-i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 196 --------GFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGEL-LETDLLIMAIGVR 266 (565)
T ss_dssp --------HHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCE-EEESEEEECSCEE
T ss_pred --------HHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCE-EEcCEEEECcCCc
Confidence 011223445566666654 555543 2 256788888 9999999999999
Q ss_pred CCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 376 GDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 376 ~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
++..+.+ ...+. +.++.+.++..+.++.||||.
T Consensus 267 p~~~l~~--------~~g~~~~~~g~i~vd~~~~t~~~~IyA 300 (565)
T 3ntd_A 267 PETQLAR--------DAGLAIGELGGIKVNAMMQTSDPAIYA 300 (565)
T ss_dssp ECCHHHH--------HHTCCBCTTSSBCCCTTCBCSSTTEEE
T ss_pred cchHHHH--------hCCcccCCCCCEEECCCcccCCCCEEE
Confidence 9954433 22222 346778888777788999986
No 37
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.3e-25 Score=225.65 Aligned_cols=278 Identities=15% Similarity=0.166 Sum_probs=170.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCC---CC-C
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS---VT-T 71 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~---~~-~ 71 (418)
.++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+......+ ....+.+... .. .
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~n~gciP~k~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 88 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAK-ALGGTCVNVGCVPKKVMWYASDLATRVSHANEYGLYQNLPLDKEH 88 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTBSTTSCCSGGG
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCC-CcCCcCcccCcHHHHHHHHHHHHHHHHHhHHhcCccccccccccc
Confidence 3589999999999999999999999999999996 78998875 22222111100000 0011111100 00 0
Q ss_pred CCCChhHHHHH-----------HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEec
Q 014821 72 DFPDHNQVLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED 140 (418)
Q Consensus 72 ~~~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 140 (418)
...+...+..+ +....++.++ .+..+ .+..++ . +.+.|...+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--~----------------------~~~~v~~~~ 141 (479)
T 2hqm_A 89 LTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKV--DVVFG-WARFNK--D----------------------GNVEVQKRD 141 (479)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTE--EEEEE-EEEECT--T----------------------SCEEEEESS
T ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEee--C----------------------CEEEEEeCC
Confidence 11122233222 2333344455 44443 344432 1 335565433
Q ss_pred CCCCceeEEEeCEEEEeeccCCCCCCCC-CCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHH
Q 014821 141 AKNHSTEVHQVDFVILCVGRFSDVPNIP-EFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIA 219 (418)
Q Consensus 141 ~~~~~~~~i~~d~vIlAtG~~~~~p~~p-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a 219 (418)
+ ...++.||+||+|||+ .|..| +++ |.+. ++++..+.. ....+++++|||+|.+|+|+|
T Consensus 142 g---~~~~~~~d~lviAtGs---~p~~p~~i~---g~~~----~~~~~~~~~-------l~~~~~~vvViGgG~ig~E~A 201 (479)
T 2hqm_A 142 N---TTEVYSANHILVATGG---KAIFPENIP---GFEL----GTDSDGFFR-------LEEQPKKVVVVGAGYIGIELA 201 (479)
T ss_dssp S---CCEEEEEEEEEECCCE---EECCCTTST---TGGG----SBCHHHHHH-------CSSCCSEEEEECSSHHHHHHH
T ss_pred C---cEEEEEeCEEEEcCCC---CCCCCCCCC---Cccc----ccchHHHhc-------ccccCCeEEEECCCHHHHHHH
Confidence 3 2247999999999995 47777 777 6531 222222211 123578999999999999999
Q ss_pred HHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHh
Q 014821 220 MECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKK 299 (418)
Q Consensus 220 ~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (418)
..|...+.. |+++.+.+.. ++... . .+
T Consensus 202 ~~l~~~g~~---Vtlv~~~~~~-l~~~d-------~----~~-------------------------------------- 228 (479)
T 2hqm_A 202 GVFHGLGSE---THLVIRGETV-LRKFD-------E----CI-------------------------------------- 228 (479)
T ss_dssp HHHHHTTCE---EEEECSSSSS-CTTSC-------H----HH--------------------------------------
T ss_pred HHHHHcCCc---eEEEEeCCcc-ccccC-------H----HH--------------------------------------
Confidence 999988765 9999998753 33322 0 00
Q ss_pred hhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC------cEEEcCC-ceeeeccEEEEc
Q 014821 300 KHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED------GIVVDGQ-TTPLKTDLVILA 371 (418)
Q Consensus 300 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~------~v~~~~g-~~~~~~D~Vi~a 371 (418)
.+.+.+.+++.+|+++.+. +..+..+ .|.+++| ++ +++|.||+|
T Consensus 229 ---------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~-i~~D~vv~a 280 (479)
T 2hqm_A 229 ---------------------------QNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSI-DDVDELIWT 280 (479)
T ss_dssp ---------------------------HHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEE-EEESEEEEC
T ss_pred ---------------------------HHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEE-EEcCEEEEC
Confidence 0111234455568888875 7677532 3677888 67 999999999
Q ss_pred cCCCCCcch-hccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 372 TGFKGDVKL-KNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 372 tG~~~~~~~-~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|++|+..+ ++. ..+. +.++.+.++..+.++.|+||.
T Consensus 281 ~G~~p~~~l~l~~--------~gl~~~~~G~i~vd~~~~t~~~~IyA 319 (479)
T 2hqm_A 281 IGRKSHLGMGSEN--------VGIKLNSHDQIIADEYQNTNVPNIYS 319 (479)
T ss_dssp SCEEECCCSSGGG--------GTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CCCCCccccChhh--------cCceECCCCCEeECCCCccCCCCEEE
Confidence 999999533 222 2222 345778888777889999985
No 38
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=99.92 E-value=8.7e-26 Score=222.63 Aligned_cols=265 Identities=13% Similarity=0.196 Sum_probs=172.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCc--eEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFH--PIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~--v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
|. ++|+|||||++|+++|..|++.|.+ |+|||+.+..+.. . +. + +. .+........ .. ..
T Consensus 1 M~-~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~--~--~~--l--~~---~~~~g~~~~~-~~-~~---- 62 (410)
T 3ef6_A 1 MA-THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYD--R--PS--L--SK---AVLDGSLERP-PI-LA---- 62 (410)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBC--S--GG--G--GT---HHHHTSSSSC-CB-SS----
T ss_pred CC-CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcC--C--cc--c--cH---HHhCCCCCHH-Hh-cC----
Confidence 53 5999999999999999999999987 9999998754311 0 00 0 00 0000000000 00 11
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
......++++ ++.++++|+.++... +.|.+.++ .++.||+||+||
T Consensus 63 ----~~~~~~~~~i--~~~~~~~v~~id~~~------------------------~~v~~~~g-----~~~~~d~lvlAt 107 (410)
T 3ef6_A 63 ----EADWYGEARI--DMLTGPEVTALDVQT------------------------RTISLDDG-----TTLSADAIVIAT 107 (410)
T ss_dssp ----CTTHHHHTTC--EEEESCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECC
T ss_pred ----CHHHHHHCCC--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEcc
Confidence 1122345677 788888999998765 56777666 589999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|+. |..|+++ |.+. ..+++...+.+.. ........+++|+|||+|.+|+|+|..|...+.. |+++.+.
T Consensus 108 G~~---p~~~~ip---G~~~--~~v~~~~~~~d~~-~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtvv~~~ 175 (410)
T 3ef6_A 108 GSR---ARTMALP---GSQL--PGVVTLRTYGDVQ-VLRDSWTSATRLLIVGGGLIGCEVATTARKLGLS---VTILEAG 175 (410)
T ss_dssp CEE---ECCCCCT---TTTS--TTEECCCSHHHHH-HHHHHCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSS
T ss_pred CCc---ccCCCCC---Cccc--cceEEeccHHHHH-HHHHHhccCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 954 7777777 6541 2233322211110 0112344689999999999999999999998765 9999998
Q ss_pred CcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccc
Q 014821 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (418)
Q Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (418)
+.++..... ..
T Consensus 176 ~~~l~~~~~-----------~~---------------------------------------------------------- 186 (410)
T 3ef6_A 176 DELLVRVLG-----------RR---------------------------------------------------------- 186 (410)
T ss_dssp SSSSHHHHC-----------HH----------------------------------------------------------
T ss_pred CccchhhcC-----------HH----------------------------------------------------------
Confidence 753211000 00
Q ss_pred ccccccccCcchhhhhccCcEEEeccC-ceeEecC----cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhh
Q 014821 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (418)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~----~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~ 393 (418)
+.+.+.+.+++.+|+++.+. +..++.+ +|.+++|++ +++|.||+|+|++++..+ +....
T Consensus 187 -------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~-i~aD~Vv~a~G~~p~~~l--------~~~~g 250 (410)
T 3ef6_A 187 -------IGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRS-FVADSALICVGAEPADQL--------ARQAG 250 (410)
T ss_dssp -------HHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCE-EECSEEEECSCEEECCHH--------HHHTT
T ss_pred -------HHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCE-EEcCEEEEeeCCeecHHH--------HHhCC
Confidence 01112234455678888775 7777654 488999998 999999999999999544 33333
Q ss_pred cCCCCCCccceeeeeeccCcccc
Q 014821 394 AGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+... +++.++..+.++.|+||.
T Consensus 251 l~~~-~gi~vd~~~~t~~~~IyA 272 (410)
T 3ef6_A 251 LACD-RGVIVDHCGATLAKGVFA 272 (410)
T ss_dssp CCBS-SSEECCTTSBCSSTTEEE
T ss_pred CccC-CeEEEccCeeECCCCEEE
Confidence 3233 447777777778999985
No 39
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=99.92 E-value=6.5e-26 Score=227.20 Aligned_cols=277 Identities=13% Similarity=0.118 Sum_probs=167.4
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccc-cCCCCCCCCCCCCCCCh
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-FSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~ 76 (418)
|. .+||+|||||++|+++|..|++.|.+|+|||+++.+||.|.. +.|...+......+. +...+.. ......
T Consensus 1 M~~~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~~~~----~~~~~~ 76 (466)
T 3l8k_A 1 MSLKYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNIANV----KIPLDF 76 (466)
T ss_dssp -CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHCS----CCCCCH
T ss_pred CCccceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhcccC----CCCcCH
Confidence 54 589999999999999999999999999999988999999886 333322221111110 0000000 111122
Q ss_pred hHHH------------HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCC
Q 014821 77 NQVL------------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (418)
Q Consensus 77 ~~~~------------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 144 (418)
..+. .++....++.++ .+.. .++..++.. .+.|...++
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~-g~v~~id~~------------------------~~~V~~~~g--- 126 (466)
T 3l8k_A 77 STVQDRKDYVQELRFKQHKRNMSQYETL--TFYK-GYVKIKDPT------------------------HVIVKTDEG--- 126 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCTTE--EEES-EEEEEEETT------------------------EEEEEETTS---
T ss_pred HHHHHHHHhheeccccchHHHHHHhCCC--EEEE-eEEEEecCC------------------------eEEEEcCCC---
Confidence 2222 222333333444 3444 466666533 366665544
Q ss_pred ceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhh
Q 014821 145 STEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTT 224 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~ 224 (418)
...++.||+||+|||+ .|..|+++ |.+. ++++.++..... .....+++|+|||+|.+|+|+|..|..
T Consensus 127 ~~~~~~~d~lviAtG~---~p~~p~i~---G~~~----~~t~~~~~~~~~---~l~~~~~~vvViGgG~~g~e~A~~l~~ 193 (466)
T 3l8k_A 127 KEIEAETRYMIIASGA---ETAKLRLP---GVEY----CLTSDDIFGYKT---SFRKLPQDMVIIGAGYIGLEIASIFRL 193 (466)
T ss_dssp CEEEEEEEEEEECCCE---EECCCCCT---TGGG----SBCHHHHHSTTC---SCCSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred cEEEEecCEEEECCCC---CccCCCCC---Cccc----eEeHHHHHHHHH---HHhhCCCeEEEECCCHHHHHHHHHHHH
Confidence 2233999999999995 57777777 6551 333322221000 012347899999999999999999999
Q ss_pred hcCCCCCeEEEEecCcccccCC-CCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 225 ANGLENPCTVLYRTEHWNIPDY-FPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 225 ~~~~~~~V~~~~r~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
.+.. |+++.|.+.. ++.. . . .+. +.
T Consensus 194 ~g~~---Vtlv~~~~~~-l~~~~d-------~----~~~----------------------------~~----------- 219 (466)
T 3l8k_A 194 MGVQ---THIIEMLDRA-LITLED-------Q----DIV----------------------------NT----------- 219 (466)
T ss_dssp TTCE---EEEECSSSSS-CTTSCC-------H----HHH----------------------------HH-----------
T ss_pred cCCE---EEEEEeCCcC-CCCCCC-------H----HHH----------------------------HH-----------
Confidence 8765 9999998753 3322 2 0 000 00
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec---Cc--EEEc--CCc--eeeeccEEEEccC
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE---DG--IVVD--GQT--TPLKTDLVILATG 373 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~---~~--v~~~--~g~--~~~~~D~Vi~atG 373 (418)
+.+.++ |+++.+. +..++. ++ +.++ +|+ + +++|.||+|+|
T Consensus 220 --------------------------l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~-i~~D~vi~a~G 269 (466)
T 3l8k_A 220 --------------------------LLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKS-IFTNSVVLAAG 269 (466)
T ss_dssp --------------------------HHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEE-EEESCEEECCC
T ss_pred --------------------------HHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEE-EEcCEEEECcC
Confidence 011112 5555554 555554 33 5566 665 5 99999999999
Q ss_pred CCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 374 FKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 374 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
++|+..+ .+....+. +.++ +.++..+.++.||||.
T Consensus 270 ~~p~~~l-------~l~~~gl~~~~~G-i~vd~~~~t~~~~Iya 305 (466)
T 3l8k_A 270 RRPVIPE-------GAREIGLSISKTG-IVVDETMKTNIPNVFA 305 (466)
T ss_dssp EEECCCT-------TTGGGTCCBCSSS-BCCCTTCBCSSTTEEE
T ss_pred CCccccc-------chhhcCceeCCCC-EeECCCccCCCCCEEE
Confidence 9999542 02222222 3355 8888777779999995
No 40
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=99.92 E-value=1e-24 Score=214.81 Aligned_cols=259 Identities=13% Similarity=0.120 Sum_probs=169.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++||+|||||++|+++|..|++.|. +|+|||+.+.++.. . + ..+..... ... .. ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~--~--~----~~~~~~~~-~~~--~~---~~-------- 64 (408)
T 2gqw_A 7 KAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYD--R--P----PLSKDFMA-HGD--AE---KI-------- 64 (408)
T ss_dssp CSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBC--S--G----GGGTHHHH-HCC--GG---GS--------
T ss_pred CCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCccc--C--C----CCCHHHhC-CCc--hh---hh--------
Confidence 4799999999999999999999887 59999997643210 0 0 00000000 000 00 00
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+++ ..+++++ .++++++|+.++... +.|.+.++ .++.||+||+|||+
T Consensus 65 -~~~-~~~~~~v--~~~~~~~v~~i~~~~------------------------~~v~~~~g-----~~~~~d~lviAtG~ 111 (408)
T 2gqw_A 65 -RLD-CKRAPEV--EWLLGVTAQSFDPQA------------------------HTVALSDG-----RTLPYGTLVLATGA 111 (408)
T ss_dssp -BCC-CTTSCSC--EEEETCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE
T ss_pred -hHH-HHHHCCC--EEEcCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEECCCC
Confidence 001 2234566 778888899988655 56777665 47999999999995
Q ss_pred CCCCCCCCCC-CCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 161 FSDVPNIPEF-PPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 161 ~~~~p~~p~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.|..|++ + |.+ ..+++.....+.. ........+++|+|||+|.+|+|+|..|...+.. |+++.+.+
T Consensus 112 ---~~~~~~i~~---G~~---~~v~~~~~~~~~~-~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~ 178 (408)
T 2gqw_A 112 ---APRALPTLQ---GAT---MPVHTLRTLEDAR-RIQAGLRPQSRLLIVGGGVIGLELAATARTAGVH---VSLVETQP 178 (408)
T ss_dssp ---EECCCGGGT---TCS---SCEEECCSHHHHH-HHHTTCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred ---CCCCCCccC---CCC---CcEEEECCHHHHH-HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE---EEEEEeCC
Confidence 4777777 7 654 1244322211110 0111233589999999999999999999988765 99999987
Q ss_pred cccccC-CCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccc
Q 014821 240 HWNIPD-YFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (418)
Q Consensus 240 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (418)
. ++++ .. . .
T Consensus 179 ~-~l~~~~~-------~----~---------------------------------------------------------- 188 (408)
T 2gqw_A 179 R-LMSRAAP-------A----T---------------------------------------------------------- 188 (408)
T ss_dssp S-SSTTTSC-------H----H----------------------------------------------------------
T ss_pred c-ccccccC-------H----H----------------------------------------------------------
Confidence 5 3332 11 0 0
Q ss_pred ccccccccCcchhhhhccCcEEEeccC-ceeEecCcEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcCCC
Q 014821 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSP 397 (418)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~ 397 (418)
+.+.+.+.+++.+|+++.+. +..++++.|++++|++ +++|.||+|+|++++..++ +...+...
T Consensus 189 -------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~v~~~~g~~-i~~D~vi~a~G~~p~~~l~--------~~~gl~~~ 252 (408)
T 2gqw_A 189 -------LADFVARYHAAQGVDLRFERSVTGSVDGVVLLDDGTR-IAADMVVVGIGVLANDALA--------RAAGLACD 252 (408)
T ss_dssp -------HHHHHHHHHHHTTCEEEESCCEEEEETTEEEETTSCE-EECSEEEECSCEEECCHHH--------HHHTCCBS
T ss_pred -------HHHHHHHHHHHcCcEEEeCCEEEEEECCEEEECCCCE-EEcCEEEECcCCCccHHHH--------HhCCCCCC
Confidence 01112234566678888885 7777755788899988 9999999999999995443 33333233
Q ss_pred CCCccceeeeeeccCcccc
Q 014821 398 TEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~ 416 (418)
+ ++.++..+.++.|+||.
T Consensus 253 ~-gi~Vd~~~~t~~~~IyA 270 (408)
T 2gqw_A 253 D-GIFVDAYGRTTCPDVYA 270 (408)
T ss_dssp S-SEECCTTCBCSSTTEEE
T ss_pred C-CEEECCCCccCCCCEEE
Confidence 3 37777777778999985
No 41
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=99.92 E-value=6.2e-25 Score=221.44 Aligned_cols=270 Identities=19% Similarity=0.237 Sum_probs=172.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC---CceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG---FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~---~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (418)
++||+|||||++|+++|..|++.| .+|+|||+++.++..+.. + +. .... ... ....+
T Consensus 35 ~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~------~--~~---~~~~-~~~--------~~~~~ 94 (490)
T 2bc0_A 35 GSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAG------M--AL---WIGE-QIA--------GPEGL 94 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGG------H--HH---HHTT-SSS--------CSGGG
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccc------c--ch---hhcC-ccC--------CHHHh
Confidence 489999999999999999999987 899999998755422111 0 00 0000 000 00011
Q ss_pred HHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeec
Q 014821 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 80 ~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
.......++++++ .++++++|..++... +.+.+.. + +...++.||+||+|||
T Consensus 95 ~~~~~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~~-~---g~~~~~~~d~lviAtG 146 (490)
T 2bc0_A 95 FYSDKEELESLGA--KVYMESPVQSIDYDA----------------------KTVTALV-D---GKNHVETYDKLIFATG 146 (490)
T ss_dssp BSCCHHHHHHTTC--EEETTCCEEEEETTT----------------------TEEEEEE-T---TEEEEEECSEEEECCC
T ss_pred hhcCHHHHHhCCC--EEEeCCEEEEEECCC----------------------CEEEEEe-C---CcEEEEECCEEEECCC
Confidence 1111233445677 788889999998655 3333321 2 2235799999999999
Q ss_pred cCCCCCCCCCCCCCCCCC------CCC---ceEEeccCCCCchhhhhhhh--cCCCEEEEEcCCCCHHHHHHHHhhhcCC
Q 014821 160 RFSDVPNIPEFPPKKGPE------AFH---GKVIHSMDYSDMDYEAAANL--VKGKRVTVVGLQKSALDIAMECTTANGL 228 (418)
Q Consensus 160 ~~~~~p~~p~~~~~~g~~------~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~v~VvG~G~sa~e~a~~l~~~~~~ 228 (418)
+ .|..|+++ |.+ .|. ..+++...+.+.. ...... ..+++|+|||+|.+|+|+|..|...+..
T Consensus 147 ~---~p~~p~i~---G~~~~~~~~~f~~~~~~v~~~~~~~~~~-~~~~~~~~~~~~~vvVIGgG~ig~E~A~~l~~~g~~ 219 (490)
T 2bc0_A 147 S---QPILPPIK---GAEIKEGSLEFEATLENLQFVKLYQNSA-DVIAKLENKDIKRVAVVGAGYIGVELAEAFQRKGKE 219 (490)
T ss_dssp E---EECCCSCB---TCCBCTTCTTCCBSSTTEEECSSHHHHH-HHHHHTTSTTCCEEEEECCSHHHHHHHHHHHHTTCE
T ss_pred C---CcCCCCCC---CccccccccccccccCCEEEeCCHHHHH-HHHHHhhhcCCceEEEECCCHHHHHHHHHHHHCCCe
Confidence 5 47777777 654 231 2355533322111 111122 5689999999999999999999988765
Q ss_pred CCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCC
Q 014821 229 ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGM 308 (418)
Q Consensus 229 ~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 308 (418)
|+++.|++.++..... . .
T Consensus 220 ---Vtlv~~~~~~l~~~~~-------~----~------------------------------------------------ 237 (490)
T 2bc0_A 220 ---VVLIDVVDTCLAGYYD-------R----D------------------------------------------------ 237 (490)
T ss_dssp ---EEEEESSSSTTTTTSC-------H----H------------------------------------------------
T ss_pred ---EEEEEcccchhhhHHH-------H----H------------------------------------------------
Confidence 9999998753221111 0 0
Q ss_pred CCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCc----EEEcCCceeeeccEEEEccCCCCCcchhcc
Q 014821 309 VPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGDVKLKNI 383 (418)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~----v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~ 383 (418)
+.+.+.+.+++.+|+++.+. +..+..++ +.+ +|++ +++|.||+|+|++|+..+++
T Consensus 238 -----------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~-i~~D~Vi~a~G~~p~~~ll~- 297 (490)
T 2bc0_A 238 -----------------LTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNE-YDVDMVILAVGFRPNTTLGN- 297 (490)
T ss_dssp -----------------HHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCE-EECSEEEECCCEEECCGGGT-
T ss_pred -----------------HHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcE-EECCEEEECCCCCcChHHHH-
Confidence 01112345566778888875 77776543 444 7777 99999999999999965432
Q ss_pred ccchhhhhhhcCCCCCCccceeeeeeccCcccc
Q 014821 384 FLSQTFQDYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 384 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..+.-+.++.+.++..+.++.|+||.
T Consensus 298 -------~~l~~~~~G~I~Vd~~~~t~~~~IyA 323 (490)
T 2bc0_A 298 -------GKIDLFRNGAFLVNKRQETSIPGVYA 323 (490)
T ss_dssp -------TCSCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred -------hhhccCCCCCEEECCCcccCCCCEEE
Confidence 22111346778888877778999985
No 42
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=99.92 E-value=7.4e-25 Score=222.53 Aligned_cols=278 Identities=19% Similarity=0.234 Sum_probs=181.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCC-CCCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYP-WPDSVTTDFP 74 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~-~~~~~~~~~~ 74 (418)
.++||+|||||++|+++|..|++.|.+|+|||++..+||.|.+ +.|...+......+ .+..+. |+.. ...++
T Consensus 42 ~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~~-~~~~~ 120 (523)
T 1mo9_A 42 REYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLARTFSGQYWFPDM-TEKVV 120 (523)
T ss_dssp SCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHHTTTSTTCCCC-TTCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhhhhhcCcHHHH-Hhhhh
Confidence 3589999999999999999999999999999998779998875 22222211111100 011111 1111 12234
Q ss_pred ChhHHHHHHHH-------HH-----HhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC
Q 014821 75 DHNQVLDYIQS-------YA-----SHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (418)
Q Consensus 75 ~~~~~~~~l~~-------~~-----~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (418)
+..++..++.. .. ++.++ .+.+++++..++. +.|.+. +
T Consensus 121 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv--~~~~~~~v~~i~~--------------------------~~v~~~-g- 170 (523)
T 1mo9_A 121 GIKEVVDLFRAGRNGPHGIMNFQSKEQLNL--EYILNCPAKVIDN--------------------------HTVEAA-G- 170 (523)
T ss_dssp CHHHHHHHHHHHTHHHHHHHHHHHHHTSCC--CEEESSCCEEEET--------------------------TEEEET-T-
T ss_pred hHHHHHHHHHhhhhhhhhhhhhcccccCCc--EEEEeeEEEEeeC--------------------------CEEEEC-C-
Confidence 46677766653 33 55666 5665677777653 235553 3
Q ss_pred CCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCC-CchhhhhhhhcCCCEEEEEcCCCCHHHHHHH
Q 014821 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYS-DMDYEAAANLVKGKRVTVVGLQKSALDIAME 221 (418)
Q Consensus 143 ~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~ 221 (418)
..+.||+||+|||+ .|..|+++ |.+. ..++++.++. .. ....+++++|||+|.+|+|+|..
T Consensus 171 ----~~~~~d~lViATGs---~p~~p~i~---G~~~--~~v~~~~~~~~~l------~~~~g~~vvViGgG~~g~E~A~~ 232 (523)
T 1mo9_A 171 ----KVFKAKNLILAVGA---GPGTLDVP---GVNA--KGVFDHATLVEEL------DYEPGSTVVVVGGSKTAVEYGCF 232 (523)
T ss_dssp ----EEEEBSCEEECCCE---ECCCCCST---TTTS--BTEEEHHHHHHHC------CSCCCSEEEEECCSHHHHHHHHH
T ss_pred ----EEEEeCEEEECCCC---CCCCCCCC---Cccc--CcEeeHHHHHHHH------HhcCCCeEEEECCCHHHHHHHHH
Confidence 57999999999995 47777777 6643 1245443322 11 11224999999999999999999
Q ss_pred HhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhh
Q 014821 222 CTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKH 301 (418)
Q Consensus 222 l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (418)
|...+.. |+++.+.+. +++... . .
T Consensus 233 l~~~G~~---Vtlv~~~~~-~l~~~~-------~----~----------------------------------------- 256 (523)
T 1mo9_A 233 FNATGRR---TVMLVRTEP-LKLIKD-------N----E----------------------------------------- 256 (523)
T ss_dssp HHHTTCE---EEEECSSCT-TTTCCS-------H----H-----------------------------------------
T ss_pred HHHcCCe---EEEEEecCc-cccccc-------H----H-----------------------------------------
Confidence 9988765 999999875 333221 0 0
Q ss_pred hhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--Cc------EEEcCCc-eeeeccEEEEc
Q 014821 302 RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG------IVVDGQT-TPLKTDLVILA 371 (418)
Q Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~------v~~~~g~-~~~~~D~Vi~a 371 (418)
+...+.+.+++.+|+++.+. +..+.. ++ |.+++|+ + +++|.||+|
T Consensus 257 ------------------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~-i~aD~Vv~A 311 (523)
T 1mo9_A 257 ------------------------TRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMR-IETDFVFLG 311 (523)
T ss_dssp ------------------------HHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEE-EECSCEEEC
T ss_pred ------------------------HHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEE-EEcCEEEEC
Confidence 00112234556678888775 666653 33 5667887 6 999999999
Q ss_pred cCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 372 TGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 372 tG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
||++|+... ++....+. +.++.+.++..+.++.|+||.
T Consensus 312 ~G~~p~~~~-------~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 350 (523)
T 1mo9_A 312 LGEQPRSAE-------LAKILGLDLGPKGEVLVNEYLQTSVPNVYA 350 (523)
T ss_dssp CCCEECCHH-------HHHHHTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred cCCccCCcc-------CHHHcCCccCCCCCEEECCCCccCCCCEEE
Confidence 999999541 23333332 346778888777778999985
No 43
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=99.92 E-value=2.7e-25 Score=223.28 Aligned_cols=281 Identities=12% Similarity=0.136 Sum_probs=174.7
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc------ccCCCCCCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY------QFSDYPWPDSVTTDF 73 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~ 73 (418)
.++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.. +.|...+......+ .+..+.++.. ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~--~~~ 82 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMS--EVR 82 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEES--CEE
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccC--CCc
Confidence 4589999999999999999999999999999998899999876 23322211111000 1111111100 001
Q ss_pred CChhHHHH-----------HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC
Q 014821 74 PDHNQVLD-----------YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (418)
Q Consensus 74 ~~~~~~~~-----------~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (418)
.+...+.. .+....+++++ .+..++ +..++ . +.+.|.+.++
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~-~~~~~--~----------------------~~~~v~~~~g- 134 (474)
T 1zmd_A 83 LNLDKMMEQKSTAVKALTGGIAHLFKQNKV--VHVNGY-GKITG--K----------------------NQVTATKADG- 134 (474)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEEEE--T----------------------TEEEEECTTS-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEE-EEEec--C----------------------CEEEEEecCC-
Confidence 11222222 22444555676 566644 33443 2 3356654431
Q ss_pred CCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHH
Q 014821 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (418)
Q Consensus 143 ~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l 222 (418)
...++.||+||+|||+. |..|+++ |.+.. .++++.++.... ..+++|+|||+|.+|+|+|..|
T Consensus 135 --g~~~~~~d~lViAtGs~---p~~p~i~---g~~~~--~v~t~~~~~~~~-------~~~~~vvViGgG~~g~E~A~~l 197 (474)
T 1zmd_A 135 --GTQVIDTKNILIATGSE---VTPFPGI---TIDED--TIVSSTGALSLK-------KVPEKMVVIGAGVIGVELGSVW 197 (474)
T ss_dssp --CEEEEEEEEEEECCCEE---ECCCTTC---CCCSS--SEECHHHHTTCS-------SCCSEEEEECCSHHHHHHHHHH
T ss_pred --CcEEEEeCEEEECCCCC---CCCCCCC---CCCcC--cEEcHHHHhhcc-------ccCceEEEECCCHHHHHHHHHH
Confidence 22579999999999954 6777666 65421 355554443322 3468999999999999999999
Q ss_pred hhhcCCCCCeEEEEecCccccc-CCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhh
Q 014821 223 TTANGLENPCTVLYRTEHWNIP-DYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKH 301 (418)
Q Consensus 223 ~~~~~~~~~V~~~~r~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (418)
...+.. |+++.+++. ++| ... . .+
T Consensus 198 ~~~g~~---Vtlv~~~~~-~l~~~~~-------~----~~---------------------------------------- 222 (474)
T 1zmd_A 198 QRLGAD---VTAVEFLGH-VGGVGID-------M----EI---------------------------------------- 222 (474)
T ss_dssp HHTTCE---EEEECSSSS-SSCSSCC-------H----HH----------------------------------------
T ss_pred HHcCCE---EEEEeccCc-cCCcccC-------H----HH----------------------------------------
Confidence 988765 999999875 333 221 0 00
Q ss_pred hhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--c-EEE-------cCCceeeeccEEEE
Q 014821 302 RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G-IVV-------DGQTTPLKTDLVIL 370 (418)
Q Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~-v~~-------~~g~~~~~~D~Vi~ 370 (418)
.+.+.+.+++.+|+++.+. +..+..+ + +.+ .++++ +++|.||+
T Consensus 223 -------------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~-i~~D~vv~ 276 (474)
T 1zmd_A 223 -------------------------SKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEV-ITCDVLLV 276 (474)
T ss_dssp -------------------------HHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEE-EEESEEEE
T ss_pred -------------------------HHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceE-EEcCEEEE
Confidence 0112234455678888775 6676543 2 433 34566 99999999
Q ss_pred ccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 371 ATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 371 atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
|+|++|+..++. ++...+. +.++.+.++..+.++.|+||.
T Consensus 277 a~G~~p~~~~l~------l~~~g~~~~~~G~i~vd~~~~t~~~~IyA 317 (474)
T 1zmd_A 277 CIGRRPFTKNLG------LEELGIELDPRGRIPVNTRFQTKIPNIYA 317 (474)
T ss_dssp CSCEEECCTTSS------HHHHTCCCCTTSCCCCCTTCBCSSTTEEE
T ss_pred CcCCCcCCCcCC------chhcCCccCCCCCEEECcCCccCCCCEEE
Confidence 999999954310 2222232 335678888777888999985
No 44
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=99.92 E-value=4.2e-25 Score=222.79 Aligned_cols=282 Identities=16% Similarity=0.161 Sum_probs=168.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccc-----cCCCCCCCCCCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDSVTTDF 73 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~ 73 (418)
|.++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.. +.|...+..+...+. +..+.+... ...
T Consensus 23 m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~--~~~ 100 (491)
T 3urh_A 23 MMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVA--NPK 100 (491)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECC--CCE
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccC--CCc
Confidence 55689999999999999999999999999999998999999876 344433322222111 111111110 011
Q ss_pred CChhHHHHH-----------HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC
Q 014821 74 PDHNQVLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (418)
Q Consensus 74 ~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (418)
.+...+..+ +....++.++ .+.. ..+..++ .+.+.|...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~-g~~~~~~------------------------~~~~~v~~~~-- 151 (491)
T 3urh_A 101 LNLQKMMAHKDATVKSNVDGVSFLFKKNKI--DGFQ-GTGKVLG------------------------QGKVSVTNEK-- 151 (491)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEE-SEEEECS------------------------SSEEEEECTT--
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEE-EEEEEec------------------------CCEEEEEeCC--
Confidence 111222222 2223334454 3333 2222221 1234454322
Q ss_pred CCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCC-CCceEEecc-CCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHH
Q 014821 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEA-FHGKVIHSM-DYSDMDYEAAANLVKGKRVTVVGLQKSALDIAM 220 (418)
Q Consensus 143 ~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~ 220 (418)
+...++.||+||+|||+. | +.++ |.+. +.+..++++ .... ....+++|+|||+|.+|+|+|.
T Consensus 152 -g~~~~~~~d~lViATGs~---p--~~ip---g~~~~~~~~~~~~~~~~~~-------~~~~~~~vvViGgG~~g~E~A~ 215 (491)
T 3urh_A 152 -GEEQVLEAKNVVIATGSD---V--AGIP---GVEVAFDEKTIVSSTGALA-------LEKVPASMIVVGGGVIGLELGS 215 (491)
T ss_dssp -SCEEEEECSEEEECCCEE---C--CCBT---TBCCCCCSSSEECHHHHTS-------CSSCCSEEEEECCSHHHHHHHH
T ss_pred -CceEEEEeCEEEEccCCC---C--CCCC---CcccccCCeeEEehhHhhh-------hhhcCCeEEEECCCHHHHHHHH
Confidence 344689999999999965 3 2333 4432 222223322 2222 2245789999999999999999
Q ss_pred HHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhh
Q 014821 221 ECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKK 300 (418)
Q Consensus 221 ~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (418)
.|...+.. |+++.+.+.. ++... . .
T Consensus 216 ~l~~~g~~---Vtlv~~~~~~-l~~~d-------~----~---------------------------------------- 240 (491)
T 3urh_A 216 VWARLGAK---VTVVEFLDTI-LGGMD-------G----E---------------------------------------- 240 (491)
T ss_dssp HHHHHTCE---EEEECSSSSS-SSSSC-------H----H----------------------------------------
T ss_pred HHHHcCCE---EEEEeccccc-cccCC-------H----H----------------------------------------
Confidence 99998865 9999988753 33221 0 0
Q ss_pred hhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--c--EEEcC---C--ceeeeccEEEE
Q 014821 301 HRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVDG---Q--TTPLKTDLVIL 370 (418)
Q Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~--v~~~~---g--~~~~~~D~Vi~ 370 (418)
+.+.+.+.+++.+|+++.+. +..+..+ + +.+++ | ++ +++|.||+
T Consensus 241 -------------------------~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~Vi~ 294 (491)
T 3urh_A 241 -------------------------VAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATT-LDAEVVLI 294 (491)
T ss_dssp -------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEE-EEESEEEE
T ss_pred -------------------------HHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEE-EEcCEEEE
Confidence 01112234566678888775 6666532 2 55552 5 45 99999999
Q ss_pred ccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 371 ATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 371 atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
|||++|+..++. +....+. +.++.+.++..+.++.||||.
T Consensus 295 a~G~~p~~~~l~------l~~~g~~~~~~G~i~vd~~~~t~~~~IyA 335 (491)
T 3urh_A 295 ATGRKPSTDGLG------LAKAGVVLDSRGRVEIDRHFQTSIAGVYA 335 (491)
T ss_dssp CCCCEECCTTSC------HHHHTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred eeCCccCCCccC------chhcCceECCCCCEeECCCCCCCCCCEEE
Confidence 999999954311 2222222 346778888878889999996
No 45
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=99.92 E-value=9.9e-26 Score=220.05 Aligned_cols=253 Identities=13% Similarity=0.108 Sum_probs=167.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
+.+|+|||||+||+++|..|...+.+++|||+.+..+. ++... +. .+.. ..+..++..+
T Consensus 9 ~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y-~~~~l-------~~---~l~g----------~~~~~~l~~~ 67 (385)
T 3klj_A 9 STKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPY-YRPRL-------NE---IIAK----------NKSIDDILIK 67 (385)
T ss_dssp BCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCB-CGGGH-------HH---HHHS----------CCCGGGTBSS
T ss_pred CCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCc-ccChh-------hH---HHcC----------CCCHHHccCC
Confidence 57999999999999999999777899999999875431 00000 00 0000 0111222223
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
..+..+++++ .++++++|++++... .+|++.++ .++.||+||+|||+
T Consensus 68 ~~~~~~~~~i--~~~~~~~V~~id~~~------------------------~~v~~~~g-----~~~~yd~lvlAtG~-- 114 (385)
T 3klj_A 68 KNDWYEKNNI--KVITSEFATSIDPNN------------------------KLVTLKSG-----EKIKYEKLIIASGS-- 114 (385)
T ss_dssp CHHHHHHTTC--EEECSCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE--
T ss_pred CHHHHHHCCC--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEecCC--
Confidence 3444556788 789999999998765 46777766 58999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCccc
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWN 242 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~ 242 (418)
.|..|+++ |.+ .+++...+.+.. ........+++|+|||+|.+|+|+|..|...+.. |+++.+.+.++
T Consensus 115 -~p~~p~i~---G~~----~v~~~~~~~d~~-~l~~~l~~~~~vvVIGgG~~g~E~A~~l~~~g~~---Vtvv~~~~~~l 182 (385)
T 3klj_A 115 -IANKIKVP---HAD----EIFSLYSYDDAL-KIKDECKNKGKAFIIGGGILGIELAQAIIDSGTP---ASIGIILEYPL 182 (385)
T ss_dssp -EECCCCCT---TCS----CEECCSSHHHHH-HHHHHHHHHSCEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSSSC
T ss_pred -CcCCCCCC---CCC----CeEEeCCHHHHH-HHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEEcCCccc
Confidence 57788777 665 244422222111 0111223378999999999999999999998865 99999988533
Q ss_pred ccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccccccc
Q 014821 243 IPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCL 322 (418)
Q Consensus 243 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 322 (418)
..... ..
T Consensus 183 ~~~~~-----------~~-------------------------------------------------------------- 189 (385)
T 3klj_A 183 ERQLD-----------RD-------------------------------------------------------------- 189 (385)
T ss_dssp TTTSC-----------HH--------------------------------------------------------------
T ss_pred hhhcC-----------HH--------------------------------------------------------------
Confidence 22121 00
Q ss_pred ccccCcchhhhhccCcEEEeccC-ceeEecCcEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcCCCCCCc
Q 014821 323 TITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKL 401 (418)
Q Consensus 323 ~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 401 (418)
+.+.+.+.+++.+|+++.+. +..+ |++ +++|.||+|||++|+..+++. ..+... +++
T Consensus 190 ---~~~~~~~~l~~~gV~~~~~~~v~~i---------g~~-~~~D~vv~a~G~~p~~~~~~~--------~gl~~~-~gi 247 (385)
T 3klj_A 190 ---GGLFLKDKLDRLGIKIYTNSNFEEM---------GDL-IRSSCVITAVGVKPNLDFIKD--------TEIASK-RGI 247 (385)
T ss_dssp ---HHHHHHHHHHTTTCEEECSCCGGGC---------HHH-HHHSEEEECCCEEECCGGGTT--------SCCCBS-SSE
T ss_pred ---HHHHHHHHHHhCCCEEEeCCEEEEc---------CeE-EecCeEEECcCcccChhhhhh--------cCCCcC-CCE
Confidence 01112234556678888775 5444 667 999999999999999654433 333233 347
Q ss_pred cceeeeeeccCcccc
Q 014821 402 PLYRSAHIYIDTLTY 416 (418)
Q Consensus 402 ~~~~~~~~~~~~~~~ 416 (418)
.++..+.++.|+||.
T Consensus 248 ~vd~~~~t~~~~IyA 262 (385)
T 3klj_A 248 LVNDHMETSIKDIYA 262 (385)
T ss_dssp EECTTCBCSSTTEEE
T ss_pred EECCCcccCCCCEEE
Confidence 788777778999985
No 46
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=99.91 E-value=4.9e-25 Score=222.28 Aligned_cols=281 Identities=17% Similarity=0.214 Sum_probs=176.3
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHh-CCCceEEEe--------eCCCCCccccc--cCCcceecCCcccc----ccCCCC
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFE--------ARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYP 64 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie--------~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~ 64 (418)
|. ++||+|||||++|+++|..|++ .|.+|+||| +...+||.|.. +.|...+......+ .+..+.
T Consensus 4 M~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g 83 (495)
T 2wpf_A 4 MSKAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDVQTSHGPPFYAALGGTCVNVGCVPKKLMVTGAQYMDHLRESAGFG 83 (495)
T ss_dssp CCEEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBCBTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred cccccCEEEECCChhHHHHHHHHHHhcCCeEEEEecccccccccCCCCCCeeecCCcchHHHHHHHHHHHHHHhHHHhcC
Confidence 54 5899999999999999999999 999999999 34678998876 33432222111110 111122
Q ss_pred CCCCCCCC--CCChhHHHHHHHHH-----------HHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCC
Q 014821 65 WPDSVTTD--FPDHNQVLDYIQSY-----------ASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGS 130 (418)
Q Consensus 65 ~~~~~~~~--~~~~~~~~~~l~~~-----------~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (418)
+... .. ..+...+..+.+.+ .++. ++ .++.+ .+..++ .
T Consensus 84 ~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~--~--------------------- 135 (495)
T 2wpf_A 84 WEFD--GSSVKANWKKLIAAKNEAVLDINKSYEGMFNDTEGL--DFFLG-WGSLES--K--------------------- 135 (495)
T ss_dssp EECC--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--EEEES-EEEEEE--T---------------------
T ss_pred cccC--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--EEEEe-EEEEee--C---------------------
Confidence 2110 00 12233444443333 2344 55 44443 455543 2
Q ss_pred CCceEEEEecCCC---CceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEE
Q 014821 131 RGKWTVAVEDAKN---HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVT 207 (418)
Q Consensus 131 ~~~~~v~~~~~~~---~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 207 (418)
++|.+.+..+ +...++.||+||+|||+ .|..|+++ |.+ .++++.++.... ..+++++
T Consensus 136 ---~~v~v~~~~~~~~~~~~~~~~d~lViATGs---~p~~p~i~---G~~----~~~~~~~~~~~~-------~~~~~vv 195 (495)
T 2wpf_A 136 ---NVVVVRETADPKSAVKERLQADHILLATGS---WPQMPAIP---GIE----HCISSNEAFYLP-------EPPRRVL 195 (495)
T ss_dssp ---TEEEEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCCT---TGG----GCEEHHHHTTCS-------SCCSEEE
T ss_pred ---CEEEEeecCCccCCCCeEEEcCEEEEeCCC---CcCCCCCC---Ccc----ccccHHHHHhhh-------hcCCeEE
Confidence 3466652111 00357999999999995 47777777 653 244444433321 3478999
Q ss_pred EEcCCCCHHHHHHHHhhh---cCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhH
Q 014821 208 VVGLQKSALDIAMECTTA---NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSP 284 (418)
Q Consensus 208 VvG~G~sa~e~a~~l~~~---~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (418)
|||+|.+|+|+|..|... +.. |+++.|.+. +++... . .
T Consensus 196 ViGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~-~l~~~d-------~----~------------------------ 236 (495)
T 2wpf_A 196 TVGGGFISVEFAGIFNAYKPPGGK---VTLCYRNNL-ILRGFD-------E----T------------------------ 236 (495)
T ss_dssp EECSSHHHHHHHHHHHHHCCTTCE---EEEEESSSS-SCTTSC-------H----H------------------------
T ss_pred EECCCHHHHHHHHHHHhhCCCCCe---EEEEEcCCc-cccccC-------H----H------------------------
Confidence 999999999999999988 654 999999875 333322 0 0
Q ss_pred HHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEcC
Q 014821 285 LRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDG 358 (418)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~~ 358 (418)
+.+.+.+.+++.+|+++.+. +..+..+ .|.+++
T Consensus 237 -----------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~ 275 (495)
T 2wpf_A 237 -----------------------------------------IREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFES 275 (495)
T ss_dssp -----------------------------------------HHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETT
T ss_pred -----------------------------------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECC
Confidence 00112234556678888885 7777542 367788
Q ss_pred CceeeeccEEEEccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 359 QTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 359 g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
|++ +++|.||+|+|++|+...+ .+....+. +.++.+.++..+.++.||||.
T Consensus 276 G~~-i~~D~vv~a~G~~p~~~~L------~l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 327 (495)
T 2wpf_A 276 GKT-LDVDVVMMAIGRIPRTNDL------QLGNVGVKLTPKGGVQVDEFSRTNVPNIYA 327 (495)
T ss_dssp SCE-EEESEEEECSCEEECCGGG------TGGGTTCCBCTTSSBCCCTTCBCSSTTEEE
T ss_pred CcE-EEcCEEEECCCCccccccc------chhhcCccCCCCCCEEECCCCccCCCCEEE
Confidence 987 9999999999999995411 02222222 335678888777778999996
No 47
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=99.91 E-value=1.4e-24 Score=218.41 Aligned_cols=281 Identities=10% Similarity=0.102 Sum_probs=173.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCCCCCCCCCh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (418)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.. +.|...+......+ .+..+.++.. ......
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~~~~gi~~~--~~~~~~ 83 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHLAANGIKYP--EPELDI 83 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTCCCC--CCCCCH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 589999999999999999999999999999998889988765 22221111000000 0111111100 111122
Q ss_pred hHHHH-----------HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecC----
Q 014821 77 NQVLD-----------YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA---- 141 (418)
Q Consensus 77 ~~~~~-----------~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---- 141 (418)
..+.. .+...+++.++ .+..++.+. ++ . +.+.|...++
T Consensus 84 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~--~----------------------~~v~v~~~~g~~~~ 136 (482)
T 1ojt_A 84 DMLRAYKDGVVSRLTGGLAGMAKSRKV--DVIQGDGQF-LD--P----------------------HHLEVSLTAGDAYE 136 (482)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEEEEEEE-EE--T----------------------TEEEEEEEEEEETT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEeeEEEE-cc--C----------------------CEEEEEecCCcccc
Confidence 22222 23344555676 666655433 22 2 3355544332
Q ss_pred ---CCCceeEEEeCEEEEeeccCCCCCCCCC-CCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 142 ---KNHSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 142 ---~~~~~~~i~~d~vIlAtG~~~~~p~~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
.++...++.||+||+|||+. |..|+ ++ . + ..++++.+..... ..+++++|||+|.+|+|
T Consensus 137 ~~~~~g~~~~i~ad~lViAtGs~---p~~~~~i~---~-~---~~v~~~~~~~~~~-------~~~~~vvViGgG~ig~E 199 (482)
T 1ojt_A 137 QAAPTGEKKIVAFKNCIIAAGSR---VTKLPFIP---E-D---PRIIDSSGALALK-------EVPGKLLIIGGGIIGLE 199 (482)
T ss_dssp EEEEEEEEEEEEEEEEEECCCEE---ECCCSSCC---C-C---TTEECHHHHTTCC-------CCCSEEEEESCSHHHHH
T ss_pred cccccCcceEEEcCEEEECCCCC---CCCCCCCC---c-c---CcEEcHHHHhccc-------ccCCeEEEECCCHHHHH
Confidence 11233579999999999965 55554 32 1 1 1245444433321 34789999999999999
Q ss_pred HHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHH
Q 014821 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (418)
+|..|...+.. |+++.+.+. ++|... . .
T Consensus 200 ~A~~l~~~G~~---Vtlv~~~~~-~l~~~~-------~----~------------------------------------- 227 (482)
T 1ojt_A 200 MGTVYSTLGSR---LDVVEMMDG-LMQGAD-------R----D------------------------------------- 227 (482)
T ss_dssp HHHHHHHHTCE---EEEECSSSS-SSTTSC-------H----H-------------------------------------
T ss_pred HHHHHHHcCCe---EEEEEECCc-cccccC-------H----H-------------------------------------
Confidence 99999998865 999999875 333222 0 0
Q ss_pred HhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC----cEEEcC----CceeeeccEE
Q 014821 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDG----QTTPLKTDLV 368 (418)
Q Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~----~v~~~~----g~~~~~~D~V 368 (418)
+.+.+.+.+++.+|+++.+. +.+++.+ .+++++ |++ +++|.|
T Consensus 228 ----------------------------~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~-~~~D~v 278 (482)
T 1ojt_A 228 ----------------------------LVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEP-QRYDAV 278 (482)
T ss_dssp ----------------------------HHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSC-EEESCE
T ss_pred ----------------------------HHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceE-EEcCEE
Confidence 01112335566678888886 7777543 266776 777 899999
Q ss_pred EEccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 369 ILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 369 i~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
|+|+|++|+..+.. +....+. +.++.+.++..+.++.|+||.
T Consensus 279 v~a~G~~p~~~~l~------~~~~gl~~~~~G~i~vd~~~~t~~~~IyA 321 (482)
T 1ojt_A 279 LVAAGRAPNGKLIS------AEKAGVAVTDRGFIEVDKQMRTNVPHIYA 321 (482)
T ss_dssp EECCCEEECGGGTT------GGGTTCCCCTTSCCCCCTTSBCSSTTEEE
T ss_pred EECcCCCcCCCCCC------hhhcCceeCCCCCEeeCCCcccCCCCEEE
Confidence 99999999954310 2222222 234678888877889999995
No 48
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.91 E-value=3.7e-25 Score=221.65 Aligned_cols=279 Identities=13% Similarity=0.132 Sum_probs=171.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc-----ccCCCCCCCCCCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY-----QFSDYPWPDSVTTDF 73 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~ 73 (418)
|+++||+|||||++|+++|..|++.|.+|+|||+. .+||.|.. +.|...+......+ .+..+.++ . .. .
T Consensus 1 M~~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~-~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~-~~-~ 76 (464)
T 2a8x_A 1 MTHYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPK-YWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-G-EV-T 76 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-E-CC-E
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCC-CCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-C-CC-c
Confidence 77799999999999999999999999999999997 78887754 22222111100000 01111111 0 00 0
Q ss_pred CChhH-----------HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC
Q 014821 74 PDHNQ-----------VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (418)
Q Consensus 74 ~~~~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (418)
.+... +...+...+++.++ .++.++.+. + +. +.+.|...++
T Consensus 77 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv--~~~~g~~~~-i--d~----------------------~~v~V~~~~G- 128 (464)
T 2a8x_A 77 FDYGIAYDRSRKVAEGRVAGVHFLMKKNKI--TEIHGYGTF-A--DA----------------------NTLLVDLNDG- 128 (464)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECEEEEE-S--SS----------------------SEEEEEETTS-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-e--cC----------------------CeEEEEeCCC-
Confidence 11111 22334555666677 666655432 2 22 3455654332
Q ss_pred CCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHH
Q 014821 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (418)
Q Consensus 143 ~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l 222 (418)
...++.||+||+|||+. |..|+++ +.+. .++++.+.... ...+++|+|||+|.+|+|+|..|
T Consensus 129 --~~~~~~~d~lViAtG~~---~~~~~~~---g~~~---~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l 190 (464)
T 2a8x_A 129 --GTESVTFDNAIIATGSS---TRLVPGT---SLSA---NVVTYEEQILS-------RELPKSIIIAGAGAIGMEFGYVL 190 (464)
T ss_dssp --CCEEEEEEEEEECCCEE---ECCCTTC---CCBT---TEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHH
T ss_pred --ceEEEEcCEEEECCCCC---CCCCCCC---CCCc---eEEecHHHhhc-------cccCCeEEEECCcHHHHHHHHHH
Confidence 22579999999999965 5666666 5432 24443332221 13478999999999999999999
Q ss_pred hhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhh
Q 014821 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (418)
Q Consensus 223 ~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (418)
...+.. |+++.|.+. ++|... ..+
T Consensus 191 ~~~g~~---Vtlv~~~~~-~l~~~~-----------~~~----------------------------------------- 214 (464)
T 2a8x_A 191 KNYGVD---VTIVEFLPR-ALPNED-----------ADV----------------------------------------- 214 (464)
T ss_dssp HHTTCE---EEEECSSSS-SSTTSC-----------HHH-----------------------------------------
T ss_pred HHcCCe---EEEEEcCCc-cccccC-----------HHH-----------------------------------------
Confidence 988765 999999875 333322 000
Q ss_pred hcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--c--EEEc-CC--ceeeeccEEEEccCC
Q 014821 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVD-GQ--TTPLKTDLVILATGF 374 (418)
Q Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~--v~~~-~g--~~~~~~D~Vi~atG~ 374 (418)
.+.+.+.+++.+|+++.+. +..++.+ + +.++ +| ++ +++|.||+|+|+
T Consensus 215 ------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~ 269 (464)
T 2a8x_A 215 ------------------------SKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQE-LKAEKVLQAIGF 269 (464)
T ss_dssp ------------------------HHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEE-EEESEEEECSCE
T ss_pred ------------------------HHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEE-EEcCEEEECCCC
Confidence 0111233445567788775 6677643 2 3444 66 45 999999999999
Q ss_pred CCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 375 KGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 375 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|+..++. ++...+. +.++.+.++..+.++.||||.
T Consensus 270 ~p~~~~l~------~~~~gl~~~~~G~i~vd~~~~t~~~~IyA 306 (464)
T 2a8x_A 270 APNVEGYG------LDKAGVALTDRKAIGVDDYMRTNVGHIYA 306 (464)
T ss_dssp EECCSSSC------HHHHTCCBCTTSSBCCCTTSBCSSTTEEE
T ss_pred CccCCCCC------chhcCCccCCCCCEeECcCCccCCCCEEE
Confidence 99954311 2222232 335778888878889999985
No 49
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.91 E-value=3.3e-25 Score=215.16 Aligned_cols=256 Identities=15% Similarity=0.168 Sum_probs=168.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
.||+|||||++|+++|..|++.| +|+|||+.+..+ |.. +. + +. .+... ....++..+.
T Consensus 9 ~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~~~--~~~--~~--l--~~---~~~g~----------~~~~~~~~~~ 66 (367)
T 1xhc_A 9 SKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPVPY--YSK--PM--L--SH---YIAGF----------IPRNRLFPYS 66 (367)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSSCC--CCS--TT--H--HH---HHTTS----------SCGGGGCSSC
T ss_pred CcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCCCc--ccc--ch--h--HH---HHhCC----------CCHHHhccCC
Confidence 58999999999999999999999 999999976432 100 00 0 00 00000 0111121122
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCCC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
.+..+++++ +++.+++|..++... +.|. .++ .++.||+||+|||+
T Consensus 67 ~~~~~~~~v--~~~~g~~v~~id~~~------------------------~~V~-~~g-----~~~~~d~lViATGs--- 111 (367)
T 1xhc_A 67 LDWYRKRGI--EIRLAEEAKLIDRGR------------------------KVVI-TEK-----GEVPYDTLVLATGA--- 111 (367)
T ss_dssp HHHHHHHTE--EEECSCCEEEEETTT------------------------TEEE-ESS-----CEEECSEEEECCCE---
T ss_pred HHHHHhCCc--EEEECCEEEEEECCC------------------------CEEE-ECC-----cEEECCEEEECCCC---
Confidence 334456687 788888899988655 5666 444 47999999999995
Q ss_pred CCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcccc
Q 014821 164 VPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNI 243 (418)
Q Consensus 164 ~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~~ 243 (418)
.|..|+++ |.+ .+++...+.+.. .......++++++|||+|.+|+|+|..|...+.. |+++.|.+. ++
T Consensus 112 ~p~~p~i~---G~~----~v~~~~~~~~~~-~l~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~-~l 179 (367)
T 1xhc_A 112 RAREPQIK---GKE----YLLTLRTIFDAD-RIKESIENSGEAIIIGGGFIGLELAGNLAEAGYH---VKLIHRGAM-FL 179 (367)
T ss_dssp EECCCCSB---TGG----GEECCCSHHHHH-HHHHHHHHHSEEEEEECSHHHHHHHHHHHHTTCE---EEEECSSSC-CT
T ss_pred CCCCCCCC---CcC----CEEEEcCHHHHH-HHHHHhhcCCcEEEECCCHHHHHHHHHHHhCCCE---EEEEeCCCe-ec
Confidence 57777777 622 344432222111 0001112458999999999999999999998765 999998875 33
Q ss_pred cCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccc
Q 014821 244 PDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLT 323 (418)
Q Consensus 244 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 323 (418)
+ .. ..+
T Consensus 180 ~-~~-----------~~~-------------------------------------------------------------- 185 (367)
T 1xhc_A 180 G-LD-----------EEL-------------------------------------------------------------- 185 (367)
T ss_dssp T-CC-----------HHH--------------------------------------------------------------
T ss_pred c-CC-----------HHH--------------------------------------------------------------
Confidence 3 21 000
Q ss_pred cccCcchhhhhccCcEEEeccC-ceeEecCcEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcCCCCCCcc
Q 014821 324 ITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLP 402 (418)
Q Consensus 324 ~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 402 (418)
.+.+.+.+++.+|+++.+. +..++.+++.+++|+ +++|.||+|+|++|+..++ +...+... +.+.
T Consensus 186 ---~~~l~~~l~~~gV~i~~~~~v~~i~~~~v~~~~g~--i~~D~vi~a~G~~p~~~ll--------~~~gl~~~-~gi~ 251 (367)
T 1xhc_A 186 ---SNMIKDMLEETGVKFFLNSELLEANEEGVLTNSGF--IEGKVKICAIGIVPNVDLA--------RRSGIHTG-RGIL 251 (367)
T ss_dssp ---HHHHHHHHHHTTEEEECSCCEEEECSSEEEETTEE--EECSCEEEECCEEECCHHH--------HHTTCCBS-SSEE
T ss_pred ---HHHHHHHHHHCCCEEEcCCEEEEEEeeEEEECCCE--EEcCEEEECcCCCcCHHHH--------HhCCCCCC-CCEE
Confidence 0112235566689999886 888887789998885 9999999999999995433 33333232 3477
Q ss_pred ceeeeeeccCcccc
Q 014821 403 LYRSAHIYIDTLTY 416 (418)
Q Consensus 403 ~~~~~~~~~~~~~~ 416 (418)
++..+.++.||||.
T Consensus 252 Vd~~~~t~~~~IyA 265 (367)
T 1xhc_A 252 IDDNFRTSAKDVYA 265 (367)
T ss_dssp CCTTSBCSSTTEEE
T ss_pred ECCCcccCCCCEEE
Confidence 77766778899985
No 50
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=99.91 E-value=1.1e-24 Score=219.09 Aligned_cols=275 Identities=14% Similarity=0.185 Sum_probs=170.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPD 75 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~ 75 (418)
.++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+......+ .+..+.++.. ....+
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~-~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~ 95 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGARAAVVESH-KLGGTCVNVGCVPKKVMWNTAVHSEFMHDHADYGFPSC--EGKFN 95 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHTTTTTTTSCCC--CCCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC-CCCCcccccCccchHHHHHHHHHHHHHHHHHhcCccCC--CCccC
Confidence 3589999999999999999999999999999975 79998866 33332222111111 1112222211 12233
Q ss_pred hhHHHHHHHHH-----------HHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCC
Q 014821 76 HNQVLDYIQSY-----------ASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (418)
Q Consensus 76 ~~~~~~~l~~~-----------~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 144 (418)
...+..+.+.+ .++.++ .+.. ..+..++. ..+.|.. ++
T Consensus 96 ~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~-g~~~~~~~------------------------~~~~v~~-~g--- 144 (478)
T 3dk9_A 96 WRVIKEKRDAYVSRLNAIYQNNLTKSHI--EIIR-GHAAFTSD------------------------PKPTIEV-SG--- 144 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEE-SCEEECSC------------------------SSCEEEE-TT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEE-eEEEEeeC------------------------CeEEEEE-CC---
Confidence 34444443333 233344 3333 23332221 2255653 33
Q ss_pred ceeEEEeCEEEEeeccCCCCCCCC---CCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHH
Q 014821 145 STEVHQVDFVILCVGRFSDVPNIP---EFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAME 221 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~~~p~~p---~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~ 221 (418)
.++.||+||+|||+ .|..| +++ |.+ ..+++..+... ...+++|+|||+|.+|+|+|..
T Consensus 145 --~~~~~d~lviAtG~---~p~~p~~~~i~---G~~----~~~~~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~ 205 (478)
T 3dk9_A 145 --KKYTAPHILIATGG---MPSTPHESQIP---GAS----LGITSDGFFQL-------EELPGRSVIVGAGYIAVEMAGI 205 (478)
T ss_dssp --EEEECSCEEECCCE---EECCCCTTTST---TGG----GSBCHHHHTTC-------CSCCSEEEEECCSHHHHHHHHH
T ss_pred --EEEEeeEEEEccCC---CCCCCCcCCCC---CCc----eeEchHHhhch-------hhcCccEEEECCCHHHHHHHHH
Confidence 47999999999995 46777 677 654 12333333221 2347899999999999999999
Q ss_pred HhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhh
Q 014821 222 CTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKH 301 (418)
Q Consensus 222 l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (418)
|...+.. |+++.|.+..+ +... ..
T Consensus 206 l~~~g~~---Vtlv~~~~~~l-~~~d-----------~~----------------------------------------- 229 (478)
T 3dk9_A 206 LSALGSK---TSLMIRHDKVL-RSFD-----------SM----------------------------------------- 229 (478)
T ss_dssp HHHTTCE---EEEECSSSSSC-TTSC-----------HH-----------------------------------------
T ss_pred HHHcCCe---EEEEEeCCccc-cccC-----------HH-----------------------------------------
Confidence 9998765 99999987633 3322 00
Q ss_pred hhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--Cc----EEEcC---C----ceeeeccE
Q 014821 302 RLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG----IVVDG---Q----TTPLKTDL 367 (418)
Q Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~----v~~~~---g----~~~~~~D~ 367 (418)
+.+.+.+.+++.+|+++.+. +..++. ++ +.+++ | ++ +++|.
T Consensus 230 ------------------------~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~-~~~D~ 284 (478)
T 3dk9_A 230 ------------------------ISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMI-PDVDC 284 (478)
T ss_dssp ------------------------HHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEE-EEESE
T ss_pred ------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceE-EEcCE
Confidence 01112234556678888875 666653 23 45554 2 45 89999
Q ss_pred EEEccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 368 VILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 368 Vi~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
||+|+|++|+...+. +....+. +.++.+.++..+.++.||||.
T Consensus 285 vi~a~G~~p~~~~l~------l~~~g~~~~~~G~i~vd~~~~t~~~~IyA 328 (478)
T 3dk9_A 285 LLWAIGRVPNTKDLS------LNKLGIQTDDKGHIIVDEFQNTNVKGIYA 328 (478)
T ss_dssp EEECSCEEESCTTSC------GGGGTCCBCTTCCBCCCTTCBCSSTTEEE
T ss_pred EEEeeccccCCCCCC------chhcCCeeCCCCCEeeCCCcccCCCCEEE
Confidence 999999999854110 2222222 346778888877889999996
No 51
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=99.91 E-value=1e-24 Score=218.30 Aligned_cols=274 Identities=15% Similarity=0.184 Sum_probs=169.9
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccc----cccCCCCCCCCCCCCC
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL----YQFSDYPWPDSVTTDF 73 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~ 73 (418)
|. ++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+...... .....+.+... ...
T Consensus 1 M~~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~g~~~~--~~~ 77 (463)
T 2r9z_A 1 MTQHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK-ALGGTCVNVGCVPKKVMWYASHLAEAVRDAPGFGVQAS--GGT 77 (463)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTBCCC-----
T ss_pred CCccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC-CCCCcCcCcCchhHHHHHHHHHHHHHHhhhhhcCcccC--CCC
Confidence 54 689999999999999999999999999999997 78998875 2232211111000 01111111110 111
Q ss_pred CChhHHHHHHH-----------HHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC
Q 014821 74 PDHNQVLDYIQ-----------SYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (418)
Q Consensus 74 ~~~~~~~~~l~-----------~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (418)
.+...+..+.+ ...++.++ .+..+ ++..++ . +.|.+ ++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--~------------------------~~v~~-~g- 126 (463)
T 2r9z_A 78 LDWPRLVAGRDRYIGAINSFWDGYVERLGI--TRVDG-HARFVD--A------------------------HTIEV-EG- 126 (463)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CEEEEE--T------------------------TEEEE-TT-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHCCC--EEEEe-EEEEcc--C------------------------CEEEE-CC-
Confidence 22233333322 22344455 44443 444443 2 34555 33
Q ss_pred CCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHH
Q 014821 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (418)
Q Consensus 143 ~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l 222 (418)
.++.||+||+|||+ .|..|+++ |.+. ++++..+.. ....+++|+|||+|.+|+|+|..|
T Consensus 127 ----~~~~~d~lviAtGs---~p~~p~i~---G~~~----~~~~~~~~~-------~~~~~~~vvVvGgG~~g~e~A~~l 185 (463)
T 2r9z_A 127 ----QRLSADHIVIATGG---RPIVPRLP---GAEL----GITSDGFFA-------LQQQPKRVAIIGAGYIGIELAGLL 185 (463)
T ss_dssp ----EEEEEEEEEECCCE---EECCCSCT---TGGG----SBCHHHHHH-------CSSCCSEEEEECCSHHHHHHHHHH
T ss_pred ----EEEEcCEEEECCCC---CCCCCCCC---Cccc----eecHHHHhh-------hhccCCEEEEECCCHHHHHHHHHH
Confidence 57999999999995 47777777 6531 223222211 123478999999999999999999
Q ss_pred hhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhh
Q 014821 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (418)
Q Consensus 223 ~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (418)
...+.. |+++.+++.. ++... . .+
T Consensus 186 ~~~G~~---Vtlv~~~~~~-l~~~~-------~----~~----------------------------------------- 209 (463)
T 2r9z_A 186 RSFGSE---VTVVALEDRL-LFQFD-------P----LL----------------------------------------- 209 (463)
T ss_dssp HHTTCE---EEEECSSSSS-STTSC-------H----HH-----------------------------------------
T ss_pred HhcCCE---EEEEEcCCcc-ccccC-------H----HH-----------------------------------------
Confidence 988765 9999998753 23221 0 00
Q ss_pred hcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC----cEEEcCCc-eeeeccEEEEccCCCC
Q 014821 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQT-TPLKTDLVILATGFKG 376 (418)
Q Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~----~v~~~~g~-~~~~~D~Vi~atG~~~ 376 (418)
.+.+.+.+++.+|+++.+. +..++.+ .|.+++|+ + +++|.||+|||++|
T Consensus 210 ------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~-i~~D~vv~a~G~~p 264 (463)
T 2r9z_A 210 ------------------------SATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRL-EGFDSVIWAVGRAP 264 (463)
T ss_dssp ------------------------HHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEE-EEESEEEECSCEEE
T ss_pred ------------------------HHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEE-EEcCEEEECCCCCc
Confidence 0111234556678888886 7777542 47778898 7 99999999999999
Q ss_pred CcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 377 DVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 377 ~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+.+.+ .+....+. +.++.+.++..+.++.||||.
T Consensus 265 ~~~~l------~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya 299 (463)
T 2r9z_A 265 NTRDL------GLEAAGIEVQSNGMVPTDAYQNTNVPGVYA 299 (463)
T ss_dssp SCTTS------CHHHHTCCCCTTSCCCCCTTSBCSSTTEEE
T ss_pred CCCCC------CchhcCCccCCCCCEeECCCCccCCCCEEE
Confidence 85311 02222232 336778888777888999986
No 52
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=99.91 E-value=1.6e-24 Score=218.92 Aligned_cols=287 Identities=16% Similarity=0.160 Sum_probs=175.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC---CCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCCCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK---GFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDF 73 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~---~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~ 73 (418)
++||+|||||++|+++|..|++. |.+|+|||+.. +||.|.. +.|...+......+ .+..+.++.......
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~~~ 80 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDDAK 80 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC------C
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCCCc
Confidence 48999999999999999999998 99999999987 9998765 22222111111100 111111110000111
Q ss_pred CChhHHH-----------HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC
Q 014821 74 PDHNQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK 142 (418)
Q Consensus 74 ~~~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 142 (418)
.+...+. .++....+++++ .++.++ +..++... +. ..+.+.|...++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~i~~~~--~~----------------~~~~~~V~~~~g- 138 (499)
T 1xdi_A 81 ISLPQIHARVKTLAAAQSADITAQLLSMGV--QVIAGR-GELIDSTP--GL----------------ARHRIKATAADG- 138 (499)
T ss_dssp BCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESE-EEECCSSS--CC----------------SSEEEEEECTTS-
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEecCcc--cC----------------CCCEEEEEeCCC-
Confidence 1222322 234555666777 666653 55554410 00 002244443332
Q ss_pred CCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHH
Q 014821 143 NHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (418)
Q Consensus 143 ~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l 222 (418)
....+.||+||+|||+ .|..|+++ |.+.. .++++.+.... ...+++++|||+|.+|+|+|..|
T Consensus 139 --~~~~~~~d~lviATGs---~p~~p~i~---g~~~~--~v~~~~~~~~~-------~~~~~~vvViGgG~ig~E~A~~l 201 (499)
T 1xdi_A 139 --STSEHEADVVLVATGA---SPRILPSA---QPDGE--RILTWRQLYDL-------DALPDHLIVVGSGVTGAEFVDAY 201 (499)
T ss_dssp --CEEEEEESEEEECCCE---EECCCGGG---CCCSS--SEEEGGGGGGC-------SSCCSSEEEESCSHHHHHHHHHH
T ss_pred --cEEEEEeCEEEEcCCC---CCCCCCCC---CCCcC--cEEehhHhhhh-------hccCCeEEEECCCHHHHHHHHHH
Confidence 2247999999999995 47777776 65432 24554443321 23468999999999999999999
Q ss_pred hhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhh
Q 014821 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (418)
Q Consensus 223 ~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (418)
...+.. |+++.+.+. ++|... . .
T Consensus 202 ~~~g~~---Vtlv~~~~~-~l~~~d-------~----~------------------------------------------ 224 (499)
T 1xdi_A 202 TELGVP---VTVVASQDH-VLPYED-------A----D------------------------------------------ 224 (499)
T ss_dssp HHTTCC---EEEECSSSS-SSCCSS-------H----H------------------------------------------
T ss_pred HHcCCe---EEEEEcCCc-cccccC-------H----H------------------------------------------
Confidence 988765 999999875 333322 0 0
Q ss_pred hcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCc----EEEcCCceeeeccEEEEccCCCCC
Q 014821 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~----v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
+...+.+.+++.+|+++.+. +..++.++ +.+.+|++ +++|.||+|+|++|+
T Consensus 225 -----------------------~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vv~a~G~~p~ 280 (499)
T 1xdi_A 225 -----------------------AALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRT-VEGSHALMTIGSVPN 280 (499)
T ss_dssp -----------------------HHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCE-EEESEEEECCCEEEC
T ss_pred -----------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcE-EEcCEEEECCCCCcC
Confidence 01112234556678888875 77776432 45567888 999999999999999
Q ss_pred cchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 378 VKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 378 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..++. ++...+. +..+.+.++..+.++.|+||.
T Consensus 281 ~~~l~------l~~~gl~~~~~G~i~Vd~~~~t~~~~IyA 314 (499)
T 1xdi_A 281 TSGLG------LERVGIQLGRGNYLTVDRVSRTLATGIYA 314 (499)
T ss_dssp CSSSC------TTTTTCCCBTTTBCCCCSSSBCSSTTEEE
T ss_pred CCcCC------chhcCceECCCCCEEECCCcccCCCCEEE
Confidence 64411 1222222 234668888777778999985
No 53
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=99.91 E-value=1.3e-24 Score=215.49 Aligned_cols=265 Identities=14% Similarity=0.141 Sum_probs=167.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (418)
..+||+|||||++|+++|..|++.|. +|+|||+.+.+.. .. + ..+.. +.. ... ....+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~--~~--~----~l~~~---~~~--------~~~-~~~~~ 62 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPH--HL--P----PLSKA---YLA--------GKA-TAESL 62 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCB--CS--G----GGGTT---TTT--------TCS-CSGGG
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCC--cC--C----CCcHH---HhC--------CCC-ChHHh
Confidence 35899999999999999999999998 7999999754321 00 0 00000 000 000 00111
Q ss_pred HHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeec
Q 014821 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 80 ~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
.....+..+++++ .++++++|..++... ..|.+.++ .++.||+||+|||
T Consensus 63 ~~~~~~~~~~~gv--~~~~~~~v~~i~~~~------------------------~~v~~~~g-----~~~~~d~lviAtG 111 (431)
T 1q1r_A 63 YLRTPDAYAAQNI--QLLGGTQVTAINRDR------------------------QQVILSDG-----RALDYDRLVLATG 111 (431)
T ss_dssp BSSCHHHHHHTTE--EEECSCCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCC
T ss_pred cccCHHHHHhCCC--EEEeCCEEEEEECCC------------------------CEEEECCC-----CEEECCEEEEcCC
Confidence 1111233456687 788888999998655 45776655 4799999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCc--eEEeccCCCCchhh--hhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEE
Q 014821 160 RFSDVPNIPEFPPKKGPEAFHG--KVIHSMDYSDMDYE--AAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVL 235 (418)
Q Consensus 160 ~~~~~p~~p~~~~~~g~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~ 235 (418)
+ .|..|+++ |.+. .+ .+.+ +....+. .......+++|+|||+|.+|+|+|..|...+.. |+++
T Consensus 112 ~---~p~~~~i~---G~~~-~~~~~v~~---~~~~~d~~~l~~~l~~~~~vvViGgG~~g~E~A~~l~~~G~~---Vtlv 178 (431)
T 1q1r_A 112 G---RPRPLPVA---SGAV-GKANNFRY---LRTLEDAECIRRQLIADNRLVVIGGGYIGLEVAATAIKANMH---VTLL 178 (431)
T ss_dssp E---EECCCGGG---TTHH-HHSTTEEE---SSSHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEE
T ss_pred C---CccCCCCC---Cccc-CCCceEEE---ECCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHhCCCE---EEEE
Confidence 6 47777777 6541 11 0332 1111111 112234589999999999999999999988765 9999
Q ss_pred EecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccc
Q 014821 236 YRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFL 315 (418)
Q Consensus 236 ~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 315 (418)
.+.+.. ++... +. .+
T Consensus 179 ~~~~~~-l~~~~------~~----~~------------------------------------------------------ 193 (431)
T 1q1r_A 179 DTAARV-LERVT------AP----PV------------------------------------------------------ 193 (431)
T ss_dssp CSSSST-TTTTS------CH----HH------------------------------------------------------
T ss_pred EeCCcc-ccchh------hH----HH------------------------------------------------------
Confidence 988752 22211 00 00
Q ss_pred cccccccccccCcchhhhhccCcEEEeccC-ceeEec----C---cEEEcCCceeeeccEEEEccCCCCCcchhccccch
Q 014821 316 QELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE----D---GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQ 387 (418)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~----~---~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~ 387 (418)
.+.+.+.+++.+|+++.+. +..+.. + .|.+++|++ +++|.||+|+|++++..+++.
T Consensus 194 -----------~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~-i~~D~Vv~a~G~~p~~~l~~~---- 257 (431)
T 1q1r_A 194 -----------SAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTR-LPADLVIAGIGLIPNCELASA---- 257 (431)
T ss_dssp -----------HHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCE-EECSEEEECCCEEECCHHHHH----
T ss_pred -----------HHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCE-EEcCEEEECCCCCcCcchhhc----
Confidence 0111223444567777775 666654 2 367889988 999999999999998554333
Q ss_pred hhhhhhcCCCCCCccceeeeeeccCcccc
Q 014821 388 TFQDYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..+... +++.++..+.++.|+||.
T Consensus 258 ----~gl~~~-~gi~Vd~~~~ts~~~IyA 281 (431)
T 1q1r_A 258 ----AGLQVD-NGIVINEHMQTSDPLIMA 281 (431)
T ss_dssp ----TTCCBS-SSEECCTTSBCSSTTEEE
T ss_pred ----cCCCCC-CCEEECCCcccCCCCEEE
Confidence 333232 347777777778899985
No 54
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=99.91 E-value=5e-24 Score=212.72 Aligned_cols=271 Identities=17% Similarity=0.210 Sum_probs=172.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
+||+|||||++|+++|..|++. |.+|+|||+++.++..... + + .+...... ......+..
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~------~--~----~~~~g~~~------~~~~~~~~~ 62 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCG------I--A----LYLGKEIK------NNDPRGLFY 62 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGG------H--H----HHHTTCBG------GGCGGGGBS
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCccccc------c--h----hhhcCCcc------cCCHHHhhh
Confidence 5899999999999999999998 8999999998755321110 0 0 00000000 000011111
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++....+++++ .++++++|..++... + .|.+.+..++...++.||+||+|||+
T Consensus 63 ~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~v~~~~~g~~~~~~~d~lviAtGs- 115 (452)
T 2cdu_A 63 SSPEELSNLGA--NVQMRHQVTNVDPET----------------------K--TIKVKDLITNEEKTEAYDKLIMTTGS- 115 (452)
T ss_dssp CCHHHHHHTTC--EEEESEEEEEEEGGG----------------------T--EEEEEETTTCCEEEEECSEEEECCCE-
T ss_pred cCHHHHHHcCC--EEEeCCEEEEEEcCC----------------------C--EEEEEecCCCceEEEECCEEEEccCC-
Confidence 22333456687 788888999998655 2 34444422233468999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcc
Q 014821 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHW 241 (418)
Q Consensus 162 ~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~ 241 (418)
.|..|+++ |.+. ..+++...+.+.. ........+++++|||+|.+|+|+|..|...+.. |+++.+.+..
T Consensus 116 --~p~~p~i~---g~~~--~~v~~~~~~~~~~-~~~~~~~~~~~vvViGgG~~g~E~A~~l~~~g~~---Vtlv~~~~~~ 184 (452)
T 2cdu_A 116 --KPTVPPIP---GIDS--SRVYLCKNYNDAK-KLFEEAPKAKTITIIGSGYIGAELAEAYSNQNYN---VNLIDGHERV 184 (452)
T ss_dssp --EECCCCCT---TTTS--TTEEECSSHHHHH-HHHHHGGGCSEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSSST
T ss_pred --CcCCCCCC---CCCC--CCEEEeCcHHHHH-HHHHHhccCCeEEEECcCHHHHHHHHHHHhcCCE---EEEEEcCCch
Confidence 47777777 6542 2355533332211 1112334689999999999999999999888765 9999998753
Q ss_pred cccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccc
Q 014821 242 NIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSC 321 (418)
Q Consensus 242 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 321 (418)
+..... . .
T Consensus 185 l~~~~~-------~----~------------------------------------------------------------- 192 (452)
T 2cdu_A 185 LYKYFD-------K----E------------------------------------------------------------- 192 (452)
T ss_dssp TTTTSC-------H----H-------------------------------------------------------------
T ss_pred hhhhhh-------h----h-------------------------------------------------------------
Confidence 221211 0 0
Q ss_pred cccccCcchhhhhccCcEEEeccC-ceeEec--CcE--EEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcC-
Q 014821 322 LTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DGI--VVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAG- 395 (418)
Q Consensus 322 ~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~v--~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~- 395 (418)
+.+.+.+.+++.+|+++.+. +.+++. +.+ ...+|++ +++|.||+|||++|+..+++ .. +.
T Consensus 193 ----~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~-i~~D~vv~a~G~~p~~~ll~--------~~-l~~ 258 (452)
T 2cdu_A 193 ----FTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKE-IKSDIAILCIGFRPNTELLK--------GK-VAM 258 (452)
T ss_dssp ----HHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCE-EEESEEEECCCEEECCGGGT--------TT-SCB
T ss_pred ----HHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCE-EECCEEEECcCCCCCHHHHH--------Hh-hhc
Confidence 01112235566678888886 777764 333 2347877 99999999999999965332 22 22
Q ss_pred CCCCCccceeeeeeccCcccc
Q 014821 396 SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+.++.+.++..+.++.||||.
T Consensus 259 ~~~G~i~Vd~~~~t~~~~IyA 279 (452)
T 2cdu_A 259 LDNGAIITDEYMHSSNRDIFA 279 (452)
T ss_dssp CTTSCBCCCTTSBCSSTTEEE
T ss_pred CCCCCEEECCCcCcCCCCEEE
Confidence 346778888878778999985
No 55
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=99.91 E-value=2.3e-24 Score=210.71 Aligned_cols=264 Identities=16% Similarity=0.161 Sum_probs=172.9
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQV 79 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (418)
.++||+|||||++|+++|..|++.|. +|+++|++. |..|... .+. ..+ .......++
T Consensus 3 ~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~--g~~~~~~----~l~-----~~~----------~~~~~~~~~ 61 (384)
T 2v3a_A 3 ERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD--GRSYSKP----MLS-----TGF----------SKNKDADGL 61 (384)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC--CCEECGG----GGG-----GTT----------TTTCCHHHH
T ss_pred CCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC--CCccCcc----ccc-----HHH----------hCCCCHHHh
Confidence 36899999999999999999999884 689999864 3222220 000 000 001122233
Q ss_pred H-HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 80 L-DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 80 ~-~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
. .++...++++++ .++.+++|..++... ++|.+.+ .++.||+||+||
T Consensus 62 ~~~~~~~~~~~~~v--~~~~~~~v~~i~~~~------------------------~~v~~~~------~~~~~d~lviAt 109 (384)
T 2v3a_A 62 AMAEPGAMAEQLNA--RILTHTRVTGIDPGH------------------------QRIWIGE------EEVRYRDLVLAW 109 (384)
T ss_dssp EEECHHHHHHHTTC--EEECSCCCCEEEGGG------------------------TEEEETT------EEEECSEEEECC
T ss_pred hccCHHHHHHhCCc--EEEeCCEEEEEECCC------------------------CEEEECC------cEEECCEEEEeC
Confidence 2 245666677788 777788888887655 4566543 369999999999
Q ss_pred ccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 159 GRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 159 G~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|+ .|..|+++ |.+. ..++++..+.+.. ........+++++|||+|.+|+|+|..|...+.. |+++.+.
T Consensus 110 G~---~p~~p~i~---g~~~--~~v~~~~~~~~~~-~~~~~~~~~~~v~ViGgG~~g~e~A~~l~~~g~~---Vtlv~~~ 177 (384)
T 2v3a_A 110 GA---EPIRVPVE---GDAQ--DALYPINDLEDYA-RFRQAAAGKRRVLLLGAGLIGCEFANDLSSGGYQ---LDVVAPC 177 (384)
T ss_dssp CE---EECCCCCB---STTT--TCEEECSSHHHHH-HHHHHHTTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESS
T ss_pred CC---CcCCCCCC---CcCc--CCEEEECCHHHHH-HHHHhhccCCeEEEECCCHHHHHHHHHHHhCCCe---EEEEecC
Confidence 95 46777777 6532 2355544432211 0112344589999999999999999999998765 9999987
Q ss_pred CcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCccccccc
Q 014821 239 EHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQEL 318 (418)
Q Consensus 239 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 318 (418)
+. +.+... +. .
T Consensus 178 ~~-~~~~~~------~~----~---------------------------------------------------------- 188 (384)
T 2v3a_A 178 EQ-VMPGLL------HP----A---------------------------------------------------------- 188 (384)
T ss_dssp SS-SSTTTS------CH----H----------------------------------------------------------
T ss_pred cc-hhhccc------CH----H----------------------------------------------------------
Confidence 75 333211 00 0
Q ss_pred ccccccccCcchhhhhccCcEEEeccC-ceeEec--C--cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhh
Q 014821 319 SSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--D--GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (418)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~--~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~ 393 (418)
+.+.+.+.+++.+++++.+. +..++. + .+.+++|++ +++|.||+|+|++++..++ +...
T Consensus 189 -------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~-i~~d~vv~a~G~~p~~~l~--------~~~g 252 (384)
T 2v3a_A 189 -------AAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEV-IPCDLVVSAVGLRPRTELA--------FAAG 252 (384)
T ss_dssp -------HHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEECCHHH--------HHTT
T ss_pred -------HHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCE-EECCEEEECcCCCcCHHHH--------HHCC
Confidence 01112334556678888775 666653 2 367788988 9999999999999995433 3333
Q ss_pred cCCCCCCccceeeeeeccCcccc
Q 014821 394 AGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+...++ +.++..+.++.||||.
T Consensus 253 ~~~~~g-i~vd~~~~t~~~~IyA 274 (384)
T 2v3a_A 253 LAVNRG-IVVDRSLRTSHANIYA 274 (384)
T ss_dssp CCBSSS-EEECTTCBCSSTTEEE
T ss_pred CCCCCC-EEECCCCCCCCCCEEE
Confidence 323344 7787777788999985
No 56
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=99.91 E-value=4.3e-24 Score=214.06 Aligned_cols=280 Identities=16% Similarity=0.192 Sum_probs=169.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccc-cccCCCCCCCCC--CCCCCCh
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL-YQFSDYPWPDSV--TTDFPDH 76 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~-~~~~~~~~~~~~--~~~~~~~ 76 (418)
+++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+...... +.+...++..+. .......
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 81 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG-TIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGIAATVPTIDR 81 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS-STTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTSCCCCCCCCH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC-CCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCccCCCCccCH
Confidence 4789999999999999999999999999999997 79999876 2332221111110 001111111000 0111112
Q ss_pred hHHH-------HHHH-----HHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCC
Q 014821 77 NQVL-------DYIQ-----SYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (418)
Q Consensus 77 ~~~~-------~~l~-----~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (418)
..+. .+++ ...+++ ++ .+.. .++..++. ..+.|...+
T Consensus 82 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~v--~~~~-g~~~~~~~------------------------~~~~v~~~~--- 131 (467)
T 1zk7_A 82 SKLLAQQQARVDELRHAKYEGILGGNPAI--TVVH-GEARFKDD------------------------QSLTVRLNE--- 131 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHTTCTTE--EEEE-EEEEEEET------------------------TEEEEEETT---
T ss_pred HHHHHHHHHHHHHHhhhhHHHHHhccCCe--EEEE-EEEEEccC------------------------CEEEEEeCC---
Confidence 2222 2222 222333 44 4444 34555542 235555533
Q ss_pred CceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHh
Q 014821 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (418)
Q Consensus 144 ~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~ 223 (418)
+...++.||+||+|||+ .|..|+++ |.+.. .++++.+.. .....+++|+|||+|.+|+|+|..|.
T Consensus 132 g~~~~~~~d~lviAtGs---~p~~p~i~---G~~~~--~~~~~~~~~-------~~~~~~~~vvViGgG~~g~E~A~~l~ 196 (467)
T 1zk7_A 132 GGERVVMFDRCLVATGA---SPAVPPIP---GLKES--PYWTSTEAL-------ASDTIPERLAVIGSSVVALELAQAFA 196 (467)
T ss_dssp SSEEEEECSEEEECCCE---EECCCCCT---TTTTS--CCBCHHHHH-------HCSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred CceEEEEeCEEEEeCCC---CCCCCCCC---CCCcC--ceecHHHHh-------cccccCCEEEEECCCHHHHHHHHHHH
Confidence 23357999999999995 47777777 65432 123322211 12234789999999999999999999
Q ss_pred hhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 224 ~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
..+.. |+++.+.+. ++| .. ..
T Consensus 197 ~~g~~---Vtlv~~~~~-~l~-~~-----------~~------------------------------------------- 217 (467)
T 1zk7_A 197 RLGSK---VTVLARNTL-FFR-ED-----------PA------------------------------------------- 217 (467)
T ss_dssp HTTCE---EEEECSSCT-TTT-SC-----------HH-------------------------------------------
T ss_pred HcCCE---EEEEEECCc-cCC-CC-----------HH-------------------------------------------
Confidence 88765 999999875 333 22 00
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--c--EEEcCCceeeeccEEEEccCCCCCc
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVDGQTTPLKTDLVILATGFKGDV 378 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~--v~~~~g~~~~~~D~Vi~atG~~~~~ 378 (418)
+.+.+.+.+++.+|+++.+. +..++.+ . +.++ +.+ +++|.||+|+|+.++.
T Consensus 218 ----------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~-i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 218 ----------------------IGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGE-LRADKLLVATGRTPNT 273 (467)
T ss_dssp ----------------------HHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEE-EEESEEEECSCEEESC
T ss_pred ----------------------HHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcE-EEcCEEEECCCCCcCC
Confidence 01112234555678888775 6666532 2 4444 556 9999999999999885
Q ss_pred chhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 379 KLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 379 ~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
... .+....+. +.++.+.++..+.++.|+||.
T Consensus 274 ~~l------~l~~~gl~~~~~G~i~vd~~~~t~~~~iya 306 (467)
T 1zk7_A 274 RSL------ALDAAGVTVNAQGAIVIDQGMRTSNPNIYA 306 (467)
T ss_dssp TTS------CGGGGTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CcC------CchhcCCcCCCCCCEEECCCcccCCCCEEE
Confidence 421 12222222 335668888777778999986
No 57
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=99.91 E-value=1.9e-24 Score=216.82 Aligned_cols=281 Identities=13% Similarity=0.117 Sum_probs=171.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccc-----cCCCCCCCCCCCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDSVTTDFPD 75 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~~ 75 (418)
++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.. +.|...+......+. +..+.++.. .....+
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~-~~~~~~ 80 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGG-EGVTMD 80 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECG-GGCEEC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccC-CCCccC
Confidence 489999999999999999999999999999998899998875 222211111000000 000001000 000011
Q ss_pred hhHHH-----------HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCC
Q 014821 76 HNQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (418)
Q Consensus 76 ~~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 144 (418)
...+. ..+....++.++ .++.++. ..++. +.+.|...+ |
T Consensus 81 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~-~~i~~------------------------~~~~v~~~~---G 130 (468)
T 2qae_A 81 SAKMQQQKERAVKGLTGGVEYLFKKNKV--TYYKGEG-SFETA------------------------HSIRVNGLD---G 130 (468)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEEEEE-EEEET------------------------TEEEEEETT---S
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEE-EEeeC------------------------CEEEEEecC---C
Confidence 12222 223445555676 6666543 33432 235555433 2
Q ss_pred ceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhh
Q 014821 145 STEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTT 224 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~ 224 (418)
...++.||+||+|||+ .|..|+++ |.+. ..++++.++... ...+++++|||+|.+|+|+|..|..
T Consensus 131 ~~~~~~~d~lviAtG~---~p~~p~~~---g~~~--~~v~t~~~~~~~-------~~~~~~vvViGgG~~g~E~A~~l~~ 195 (468)
T 2qae_A 131 KQEMLETKKTIIATGS---EPTELPFL---PFDE--KVVLSSTGALAL-------PRVPKTMVVIGGGVIGLELGSVWAR 195 (468)
T ss_dssp CEEEEEEEEEEECCCE---EECCBTTB---CCCS--SSEECHHHHHTC-------SSCCSEEEEECCSHHHHHHHHHHHH
T ss_pred ceEEEEcCEEEECCCC---CcCCCCCC---CCCc--CceechHHHhhc-------ccCCceEEEECCCHHHHHHHHHHHH
Confidence 2357999999999995 46777666 5432 124444333221 1357899999999999999999998
Q ss_pred hcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhc
Q 014821 225 ANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLA 304 (418)
Q Consensus 225 ~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (418)
.+.. |+++.+.+. ++|... . .
T Consensus 196 ~g~~---Vtlv~~~~~-~l~~~d-------~----~-------------------------------------------- 216 (468)
T 2qae_A 196 LGAE---VTVVEFAPR-CAPTLD-------E----D-------------------------------------------- 216 (468)
T ss_dssp TTCE---EEEECSSSS-SSTTSC-------H----H--------------------------------------------
T ss_pred hCCE---EEEEecCCc-ccccCC-------H----H--------------------------------------------
Confidence 8765 999999875 333322 0 0
Q ss_pred ccCCCCCcccccccccccccccCcchhhhh-ccCcEEEeccC-ceeEecC--c--EEEc--CC--ceeeeccEEEEccCC
Q 014821 305 KFGMVPKHSFLQELSSCLTITVPEKFYDKV-EEGSIILKKSQ-DFSFCED--G--IVVD--GQ--TTPLKTDLVILATGF 374 (418)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~-v~~~~~~--~--v~~~--~g--~~~~~~D~Vi~atG~ 374 (418)
+.+.+.+.+ ++.+|+++.+. +..++.+ + +.++ +| ++ +++|.||+|+|+
T Consensus 217 ---------------------~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~-i~~D~vv~a~G~ 274 (468)
T 2qae_A 217 ---------------------VTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRET-VTCEALLVSVGR 274 (468)
T ss_dssp ---------------------HHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEE-EEESEEEECSCE
T ss_pred ---------------------HHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEE-EECCEEEECCCc
Confidence 011122345 55678888875 7777643 2 4554 66 45 999999999999
Q ss_pred CCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 375 KGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 375 ~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|+..+.. ++...+. +..+.+.++..+.++.||||.
T Consensus 275 ~p~~~~l~------l~~~gl~~~~~G~i~vd~~~~t~~~~IyA 311 (468)
T 2qae_A 275 RPFTGGLG------LDKINVAKNERGFVKIGDHFETSIPDVYA 311 (468)
T ss_dssp EECCTTSC------HHHHTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred ccCCCCCC------chhcCCccCCCCCEeECCCcccCCCCEEE
Confidence 99954311 2222222 335678888777788999985
No 58
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=1.5e-24 Score=217.66 Aligned_cols=281 Identities=15% Similarity=0.192 Sum_probs=172.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccc-----cCCCCCCCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDSVTTDFP 74 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~-----~~~~~~~~~~~~~~~ 74 (418)
.++||+|||||++|+++|..|++.|.+|+|||+.+.+||.|.. +.|...+......+. +..+.++.. ... .
T Consensus 5 ~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~-~~~-~ 82 (470)
T 1dxl_A 5 DENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVS-NVE-I 82 (470)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEES-CEE-E
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccC-CCc-c
Confidence 4689999999999999999999999999999998889998865 222211111000000 000000000 000 0
Q ss_pred ChhH-----------HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCC
Q 014821 75 DHNQ-----------VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (418)
Q Consensus 75 ~~~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (418)
+... +...+...+++.++ .+++++.+. ++ . +.+.|...+
T Consensus 83 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~-~~--~----------------------~~~~v~~~~--- 132 (470)
T 1dxl_A 83 DLAAMMGQKDKAVSNLTRGIEGLFKKNKV--TYVKGYGKF-VS--P----------------------SEISVDTIE--- 132 (470)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCEEE-EE--T----------------------TEEEECCSS---
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEEEE-ec--C----------------------CEEEEEeCC---
Confidence 1111 22234455556677 677765443 33 2 335554432
Q ss_pred CceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHh
Q 014821 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (418)
Q Consensus 144 ~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~ 223 (418)
|...++.||+||+|||+. |..|+++ |.+. ..++++.+..... ..+++|+|||+|.+|+|+|..|.
T Consensus 133 G~~~~i~~d~lIiAtGs~---p~~p~~~---g~~~--~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~~l~ 197 (470)
T 1dxl_A 133 GENTVVKGKHIIIATGSD---VKSLPGV---TIDE--KKIVSSTGALALS-------EIPKKLVVIGAGYIGLEMGSVWG 197 (470)
T ss_dssp SCCEEEECSEEEECCCEE---ECCBTTB---CCCS--SSEECHHHHTTCS-------SCCSEEEESCCSHHHHHHHHHHH
T ss_pred CceEEEEcCEEEECCCCC---CCCCCCC---CCCc--ccEEeHHHhhhhh-------hcCCeEEEECCCHHHHHHHHHHH
Confidence 223579999999999964 6666666 5432 1355544433321 35789999999999999999999
Q ss_pred hhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 224 ~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
..+.. |+++.+++. ++|... ..+
T Consensus 198 ~~g~~---Vtli~~~~~-~l~~~~-----------~~~------------------------------------------ 220 (470)
T 1dxl_A 198 RIGSE---VTVVEFASE-IVPTMD-----------AEI------------------------------------------ 220 (470)
T ss_dssp HHTCE---EEEECSSSS-SSTTSC-----------HHH------------------------------------------
T ss_pred HcCCc---EEEEEcCCc-cccccc-----------HHH------------------------------------------
Confidence 88765 999999875 333222 000
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCc----EEEc---CC--ceeeeccEEEEccC
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVD---GQ--TTPLKTDLVILATG 373 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~----v~~~---~g--~~~~~~D~Vi~atG 373 (418)
.+.+.+.+++.+|+++.+. +..++.++ +.++ +| ++ +++|.||+|+|
T Consensus 221 -----------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-~~~D~vv~a~G 276 (470)
T 1dxl_A 221 -----------------------RKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTI-IEADVVLVSAG 276 (470)
T ss_dssp -----------------------HHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEE-EEESEEECCCC
T ss_pred -----------------------HHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceE-EECCEEEECCC
Confidence 0111234455567777775 66776432 3443 45 55 99999999999
Q ss_pred CCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 374 FKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 374 ~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
++|+..+.. +....+. +.++.+.++..+.++.|+||.
T Consensus 277 ~~p~~~~l~------~~~~gl~~~~~G~i~vd~~~~t~~~~Iya 314 (470)
T 1dxl_A 277 RTPFTSGLN------LDKIGVETDKLGRILVNERFSTNVSGVYA 314 (470)
T ss_dssp EEECCTTSC------CTTTTCCBCSSSCBCCCTTCBCSSTTEEE
T ss_pred CCcCCCCCC------chhcCCccCCCCCEeECcCCccCCCCEEE
Confidence 999955411 1222222 335678888777788999985
No 59
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=99.90 E-value=5.8e-25 Score=219.33 Aligned_cols=273 Identities=14% Similarity=0.185 Sum_probs=167.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc-----ccCCCCCCCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY-----QFSDYPWPDSVTTDFP 74 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~ 74 (418)
+++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+......+ ....+.+.. .....
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~--~~~~~ 79 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAMYGQKCALIEAK-ELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDT--TINKF 79 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS-CTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEE--EEEEE
T ss_pred ccCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC-CCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccC--CCCcc
Confidence 3689999999999999999999999999999996 78998865 22322111110000 000011100 00011
Q ss_pred ChhHHHHHH-----------HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCC
Q 014821 75 DHNQVLDYI-----------QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (418)
Q Consensus 75 ~~~~~~~~l-----------~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (418)
+...+..+. ....++.++ .+..+ ++..++. +.|.+ ++
T Consensus 80 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~v--~~~~g-~~~~i~~--------------------------~~v~~-~g-- 127 (450)
T 1ges_A 80 NWETLIASRTAYIDRIHTSYENVLGKNNV--DVIKG-FARFVDA--------------------------KTLEV-NG-- 127 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEES-CCEEEET--------------------------TEEEE-TT--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEe-EEEEecC--------------------------CEEEE-CC--
Confidence 122333222 222344455 44443 3444431 23555 33
Q ss_pred CceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHh
Q 014821 144 HSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (418)
Q Consensus 144 ~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~ 223 (418)
.++.||+||+|||+ .|..|+++ |.+. ++++..+.. ....+++|+|||+|.+|+|+|..|.
T Consensus 128 ---~~~~~d~lviAtGs---~p~~p~i~---g~~~----~~~~~~~~~-------~~~~~~~vvViGgG~~g~e~A~~l~ 187 (450)
T 1ges_A 128 ---ETITADHILIATGG---RPSHPDIP---GVEY----GIDSDGFFA-------LPALPERVAVVGAGYIGVELGGVIN 187 (450)
T ss_dssp ---EEEEEEEEEECCCE---EECCCCST---TGGG----SBCHHHHHH-------CSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred ---EEEEeCEEEECCCC---CCCCCCCC---Cccc----eecHHHhhh-------hhhcCCeEEEECCCHHHHHHHHHHH
Confidence 57999999999995 47777777 6531 222222211 1234789999999999999999999
Q ss_pred hhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 224 ~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
..+.. |+++.+++. +++... . .+
T Consensus 188 ~~g~~---Vtlv~~~~~-~l~~~~-------~----~~------------------------------------------ 210 (450)
T 1ges_A 188 GLGAK---THLFEMFDA-PLPSFD-------P----MI------------------------------------------ 210 (450)
T ss_dssp HTTCE---EEEECSSSS-SSTTSC-------H----HH------------------------------------------
T ss_pred hcCCE---EEEEEeCCc-hhhhhh-------H----HH------------------------------------------
Confidence 88765 999998875 333221 0 00
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEcCCceeeeccEEEEccCCCCC
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
.+.+.+.+++.+|+++.+. +..++.+ .+.+++|++ +++|.||+|+|++|+
T Consensus 211 -----------------------~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~-i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 211 -----------------------SETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRS-ETVDCLIWAIGREPA 266 (450)
T ss_dssp -----------------------HHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCE-EEESEEEECSCEEES
T ss_pred -----------------------HHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcE-EEcCEEEECCCCCcC
Confidence 0111233444567777775 6666532 367788988 999999999999998
Q ss_pred cchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 378 VKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 378 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.+.+ .++...+. +.++.+.++..+.++.||||.
T Consensus 267 ~~~l------~~~~~gl~~~~~g~i~vd~~~~t~~~~IyA 300 (450)
T 1ges_A 267 NDNI------NLEAAGVKTNEKGYIVVDKYQNTNIEGIYA 300 (450)
T ss_dssp CTTS------CHHHHTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred CCCC------CchhcCceECCCCCEeECCCCccCCCCEEE
Confidence 5311 12222232 336778888877889999995
No 60
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=99.90 E-value=2e-24 Score=216.30 Aligned_cols=274 Identities=15% Similarity=0.136 Sum_probs=169.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCCCCCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFP 74 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~ 74 (418)
|+++||+|||||++|+++|..|++.|.+|+|||+.. +||.|.. +.|...+......+ .+..+.++. ....
T Consensus 4 m~~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~-~GG~~~~~g~iP~k~l~~~~~~~~~~~~~~~~g~~~---~~~~ 79 (464)
T 2eq6_A 4 MKTYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE-VGGVCLNVGCIPTKALLHAAETLHHLKVAEGFGLKA---KPEL 79 (464)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHHHHGGGTEEC---CCEE
T ss_pred cccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC-CCCCCCCcChHHHHHHHHHHHHHHHHHhHHhcCCCC---CCCc
Confidence 445899999999999999999999999999999976 8998865 22222111111000 011111110 0011
Q ss_pred ChhHHH-------HH----HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCC
Q 014821 75 DHNQVL-------DY----IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN 143 (418)
Q Consensus 75 ~~~~~~-------~~----l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 143 (418)
+...+. ++ +....++.++ .+..++. ..++ . ++|.+. +
T Consensus 80 ~~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~-~~~~--~------------------------~~v~v~-g-- 127 (464)
T 2eq6_A 80 DLKKLGGWRDQVVKKLTGGVGTLLKGNGV--ELLRGFA-RLVG--P------------------------KEVEVG-G-- 127 (464)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESCE-EEEE--T------------------------TEEEET-T--
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEeeeE-EEcc--C------------------------CEEEEc-c--
Confidence 112222 22 2334455566 5665443 3332 2 235554 3
Q ss_pred CceeEEEeCEEEEeeccCCCCCCCCC-CCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHH
Q 014821 144 HSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMEC 222 (418)
Q Consensus 144 ~~~~~i~~d~vIlAtG~~~~~p~~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l 222 (418)
.++.||+||+|||+. |..|+ ++ +.. .++++.++.... ...+++|+|||+|.+|+|+|..|
T Consensus 128 ---~~~~~d~lViATGs~---p~~p~gi~---~~~----~v~~~~~~~~l~------~~~~~~vvViGgG~~g~e~A~~l 188 (464)
T 2eq6_A 128 ---ERYGAKSLILATGSE---PLELKGFP---FGE----DVWDSTRALKVE------EGLPKRLLVIGGGAVGLELGQVY 188 (464)
T ss_dssp ---EEEEEEEEEECCCEE---ECCBTTBC---CSS----SEECHHHHTCGG------GCCCSEEEEECCSHHHHHHHHHH
T ss_pred ---EEEEeCEEEEcCCCC---CCCCCCCC---CCC----cEEcHHHHHhhh------hhcCCEEEEECCCHHHHHHHHHH
Confidence 479999999999954 66664 55 421 355554444322 12478999999999999999999
Q ss_pred hhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhh
Q 014821 223 TTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (418)
Q Consensus 223 ~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (418)
...+.. |+++.+.+. ++|... ..
T Consensus 189 ~~~g~~---Vtlv~~~~~-~l~~~~-----------~~------------------------------------------ 211 (464)
T 2eq6_A 189 RRLGAE---VTLIEYMPE-ILPQGD-----------PE------------------------------------------ 211 (464)
T ss_dssp HHTTCE---EEEECSSSS-SSTTSC-----------HH------------------------------------------
T ss_pred HHCCCe---EEEEEcCCc-cccccC-----------HH------------------------------------------
Confidence 988765 999999875 333221 00
Q ss_pred hcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--c--EEEc-C--Cc--eeeeccEEEEcc
Q 014821 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVD-G--QT--TPLKTDLVILAT 372 (418)
Q Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~--v~~~-~--g~--~~~~~D~Vi~at 372 (418)
+.+.+.+.+++.+|+++.+. +..++.+ + +.++ + |+ + +++|.||+|+
T Consensus 212 -----------------------~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~-i~~D~vv~a~ 267 (464)
T 2eq6_A 212 -----------------------TAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEE-VVVDKVLVAV 267 (464)
T ss_dssp -----------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEE-EEESEEEECS
T ss_pred -----------------------HHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeE-EEcCEEEECC
Confidence 00112234455678888875 6666532 2 5555 6 76 6 9999999999
Q ss_pred CCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 373 GFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 373 G~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
|++|+..+. .+....+. +.++.+.++..+.++.|+||.
T Consensus 268 G~~p~~~~l------~l~~~g~~~~~~G~i~vd~~~~t~~~~Iya 306 (464)
T 2eq6_A 268 GRKPRTEGL------GLEKAGVKVDERGFIRVNARMETSVPGVYA 306 (464)
T ss_dssp CEEESCTTS------SHHHHTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CcccCCCCC------ChhhcCceecCCCCEEECCCcccCCCCEEE
Confidence 999985432 02222222 345678888777788999985
No 61
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=99.90 E-value=1.3e-23 Score=209.50 Aligned_cols=268 Identities=16% Similarity=0.172 Sum_probs=170.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
+||+|||||++|+++|..|++. +.+|+|||+.+.++.. .... + .+.. .......++..
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~-~~~~-------~----~~~~--------~~~~~~~~~~~ 60 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFL-SAGM-------Q----LYLE--------GKVKDVNSVRY 60 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBC-GGGH-------H----HHHT--------TSSCCGGGSBS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcc-cccc-------h----hhhc--------CccCCHHHhhc
Confidence 4899999999999999999997 8999999998755411 0000 0 0000 00001111111
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++....+++++ .+++++.|..++... + .|.+.+..++...++.||+||+|||+
T Consensus 61 ~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~~~~~~~g~~~~~~~d~lviAtG~- 113 (447)
T 1nhp_A 61 MTGEKMESRGV--NVFSNTEITAIQPKE----------------------H--QVTVKDLVSGEERVENYDKLIISPGA- 113 (447)
T ss_dssp CCHHHHHHTTC--EEEETEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEECCCE-
T ss_pred CCHHHHHHCCC--EEEECCEEEEEeCCC----------------------C--EEEEEecCCCceEEEeCCEEEEcCCC-
Confidence 22333455677 788889999988655 2 35554422233346999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhc--CCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 162 SDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLV--KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 162 ~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.|..|+++ |.+. ..+++...+.+.. ....... .+++++|||+|.+|+|+|..|...+.. |+++.+.+
T Consensus 114 --~p~~p~i~---G~~~--~~v~~~~~~~~~~-~l~~~~~~~~~~~vvIiG~G~~g~e~A~~l~~~g~~---Vtlv~~~~ 182 (447)
T 1nhp_A 114 --VPFELDIP---GKDL--DNIYLMRGRQWAI-KLKQKTVDPEVNNVVVIGSGYIGIEAAEAFAKAGKK---VTVIDILD 182 (447)
T ss_dssp --EECCCCST---TTTS--BSEECCCHHHHHH-HHHHHHTCTTCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSS
T ss_pred --CcCCCCCC---CCCC--CCeEEECCHHHHH-HHHHHhhhcCCCeEEEECCCHHHHHHHHHHHHCCCe---EEEEecCc
Confidence 47777777 6542 2355433322111 0011222 689999999999999999999988765 99999987
Q ss_pred cccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccc
Q 014821 240 HWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELS 319 (418)
Q Consensus 240 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 319 (418)
. +++... +. .
T Consensus 183 ~-~l~~~~------~~----~----------------------------------------------------------- 192 (447)
T 1nhp_A 183 R-PLGVYL------DK----E----------------------------------------------------------- 192 (447)
T ss_dssp S-TTTTTC------CH----H-----------------------------------------------------------
T ss_pred c-cccccC------CH----H-----------------------------------------------------------
Confidence 5 222111 00 0
Q ss_pred cccccccCcchhhhhccCcEEEeccC-ceeEecCc----EEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhc
Q 014821 320 SCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG----IVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLA 394 (418)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~----v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~ 394 (418)
+.+.+.+.+++.+|+++.+. +..++.++ +.+ +|++ +++|.||+|||++|+..+.+ .. +
T Consensus 193 ------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~-i~~d~vi~a~G~~p~~~~~~--------~~-~ 255 (447)
T 1nhp_A 193 ------FTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNA-YDADLVVVAVGVRPNTAWLK--------GT-L 255 (447)
T ss_dssp ------HHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCE-EECSEEEECSCEEESCGGGT--------TT-S
T ss_pred ------HHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCE-EECCEEEECcCCCCChHHHH--------hh-h
Confidence 01112335566678888875 77776542 444 5667 99999999999999854332 22 2
Q ss_pred C-CCCCCccceeeeeeccCcccc
Q 014821 395 G-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 395 ~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
. +.++.+.++..+.++.|+||.
T Consensus 256 ~~~~~G~i~Vd~~~~t~~~~Iya 278 (447)
T 1nhp_A 256 ELHPNGLIKTDEYMRTSEPDVFA 278 (447)
T ss_dssp CBCTTSCBCCCTTCBCSSTTEEE
T ss_pred hhcCCCcEEECccccCCCCCEEE
Confidence 1 345668888777778899985
No 62
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=5.2e-24 Score=212.79 Aligned_cols=277 Identities=11% Similarity=0.135 Sum_probs=169.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCCCCCCCCCh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (418)
++||+|||||++|+++|..|++.|.+|+|||+. .+||.|.. +.|...+......+ .+..+.++.. .. ..+.
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~~-~~-~~~~ 79 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKAE-NV-TIDF 79 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEECC-SC-EECH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCcccC-CC-ccCH
Confidence 589999999999999999999999999999997 78988764 22221111000000 0000011000 00 0111
Q ss_pred hH-----------HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCc
Q 014821 77 NQ-----------VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHS 145 (418)
Q Consensus 77 ~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 145 (418)
.. +..++...++++++ .++.++.+ .++ . +.+.|...++
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~-~id--~----------------------~~v~V~~~~G---- 128 (455)
T 1ebd_A 80 AKVQEWKASVVKKLTGGVEGLLKGNKV--EIVKGEAY-FVD--A----------------------NTVRVVNGDS---- 128 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTTC--EEEESEEE-EEE--T----------------------TEEEEEETTE----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEE-Ecc--C----------------------CeEEEEeCCC----
Confidence 11 23334555666677 66665543 343 2 3366655432
Q ss_pred eeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhh
Q 014821 146 TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTA 225 (418)
Q Consensus 146 ~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~ 225 (418)
..++.||+||+|||+. |..|+++ |.+. .++++.+... ....+++|+|||+|.+|+|+|..|...
T Consensus 129 ~~~i~~d~lViATGs~---p~~~~~~---g~~~---~v~~~~~~~~-------~~~~~~~vvViGgG~~g~e~A~~l~~~ 192 (455)
T 1ebd_A 129 AQTYTFKNAIIATGSR---PIELPNF---KFSN---RILDSTGALN-------LGEVPKSLVVIGGGYIGIELGTAYANF 192 (455)
T ss_dssp EEEEECSEEEECCCEE---ECCBTTB---CCCS---SEECHHHHHT-------CSSCCSEEEEECCSHHHHHHHHHHHHT
T ss_pred cEEEEeCEEEEecCCC---CCCCCCC---Cccc---eEecHHHHhc-------cccCCCeEEEECCCHHHHHHHHHHHHc
Confidence 1579999999999954 6666666 5432 2444433222 113478999999999999999999988
Q ss_pred cCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcc
Q 014821 226 NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAK 305 (418)
Q Consensus 226 ~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (418)
+.. |+++.+.+. ++|... . .+
T Consensus 193 g~~---Vtlv~~~~~-~l~~~~-------~----~~-------------------------------------------- 213 (455)
T 1ebd_A 193 GTK---VTILEGAGE-ILSGFE-------K----QM-------------------------------------------- 213 (455)
T ss_dssp TCE---EEEEESSSS-SSTTSC-------H----HH--------------------------------------------
T ss_pred CCc---EEEEEcCCc-cccccC-------H----HH--------------------------------------------
Confidence 765 999999875 333221 0 00
Q ss_pred cCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--cE--EEc---CCceeeeccEEEEccCCCCC
Q 014821 306 FGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--GI--VVD---GQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 306 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~v--~~~---~g~~~~~~D~Vi~atG~~~~ 377 (418)
.+.+.+.+++.+|+++.+. +..++.+ ++ .++ ++++ +++|.||+|+|++|+
T Consensus 214 ---------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~-~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 214 ---------------------AAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKT-IDADYVLVTVGRRPN 271 (455)
T ss_dssp ---------------------HHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEE-EEESEEEECSCEEES
T ss_pred ---------------------HHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeE-EEcCEEEECcCCCcc
Confidence 0111234455567787775 6666532 23 443 4456 999999999999998
Q ss_pred cchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 378 VKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 378 ~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
..++. ++...+. +.++.+.++..+.++.|+||.
T Consensus 272 ~~~l~------~~~~g~~~~~~G~i~vd~~~~t~~~~Iya 305 (455)
T 1ebd_A 272 TDELG------LEQIGIKMTNRGLIEVDQQCRTSVPNIFA 305 (455)
T ss_dssp CSSSS------TTTTTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred cCcCC------hhhcCCccCCCCCEeeCCCcccCCCCEEE
Confidence 54311 1222222 335678888777788999985
No 63
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=99.90 E-value=7.6e-24 Score=208.68 Aligned_cols=265 Identities=14% Similarity=0.072 Sum_probs=171.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHh---CCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~---~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++|+|||||++|+++|..|++ .+.+|+|||+++.++.. +. .++. ........++.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~-----~~--------------~~~~---~~~~~~~~~~~ 59 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR-----PA--------------LPHV---AIGVRDVDELK 59 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC-----CS--------------SCCC---CSSCCCCCCEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec-----cc--------------hhhc---ccCCcCHHHHH
Confidence 689999999999999999999 89999999998733211 00 0000 01111223344
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.++.+.++++++ .+..+ +|+.++... ..|++.++. +...++.||+||+|||.
T Consensus 60 ~~~~~~~~~~gv--~~~~~-~v~~i~~~~------------------------~~V~~~~g~-~~~~~~~~d~lViAtG~ 111 (409)
T 3h8l_A 60 VDLSEALPEKGI--QFQEG-TVEKIDAKS------------------------SMVYYTKPD-GSMAEEEYDYVIVGIGA 111 (409)
T ss_dssp EEHHHHTGGGTC--EEEEC-EEEEEETTT------------------------TEEEEECTT-SCEEEEECSEEEECCCC
T ss_pred HHHHHHHhhCCe--EEEEe-eEEEEeCCC------------------------CEEEEccCC-cccceeeCCEEEECCCC
Confidence 456666677787 66654 898888655 356666642 33457999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhh-cCCCEEEEEcCCC-------------------------C
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANL-VKGKRVTVVGLQK-------------------------S 214 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~VvG~G~-------------------------s 214 (418)
.|..|.++ |.+. ...+...+..... ..... ...++++|||+|. .
T Consensus 112 ---~~~~~~ip---G~~~---~~~~~~~~~~~~~-~~~~l~~~~~~~vViG~G~f~~~~~~~~~~p~~~~p~~~~~~~~~ 181 (409)
T 3h8l_A 112 ---HLATELVK---GWDK---YGYSVCEPEFATK-LREKLESFQGGNIAIGSGPFYQGHNPKPKVPENFVPNADSACEGP 181 (409)
T ss_dssp ---EECGGGSB---THHH---HCEESSSTTHHHH-HHHHHHHCCSEEEEEEECCBCCCCSSCCBSCTTSSCCCSCSSCHH
T ss_pred ---CcCccCCC---Chhh---cCcCcCCHHHHHH-HHHHHHHhcCCeEEEEecccccCCCccccccccccCCCCcccCCH
Confidence 46666666 6553 2333333322110 00111 1126677999992 3
Q ss_pred HHHHHHHHh----hhcCC-CCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHH
Q 014821 215 ALDIAMECT----TANGL-ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAI 289 (418)
Q Consensus 215 a~e~a~~l~----~~~~~-~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (418)
++|+|..+. ..+.. ..+|+++++.+ +++... ..
T Consensus 182 ~~e~a~~~~~~l~~~g~~~~~~v~~~~~~~--~l~~~~-----------~~----------------------------- 219 (409)
T 3h8l_A 182 VFEMSLMLHGYFKKKGMLDKVHVTVFSPGE--YLSDLS-----------PN----------------------------- 219 (409)
T ss_dssp HHHHHHHHHHHHHTTTCTTTEEEEEECSSS--SSTTBC-----------HH-----------------------------
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEEeCCc--cccccC-----------HH-----------------------------
Confidence 778886654 33320 12589998876 333221 00
Q ss_pred HHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCcEEEcCCceeeeccEE
Q 014821 290 SKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDGQTTPLKTDLV 368 (418)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~g~~~~~~D~V 368 (418)
+.+.+.+.+++.+|+++.+. |.+++.++|++++|++ +++|.|
T Consensus 220 ------------------------------------~~~~~~~~l~~~gV~~~~~~~v~~i~~~~v~~~~g~~-~~~D~v 262 (409)
T 3h8l_A 220 ------------------------------------SRKAVASIYNQLGIKLVHNFKIKEIREHEIVDEKGNT-IPADIT 262 (409)
T ss_dssp ------------------------------------HHHHHHHHHHHHTCEEECSCCEEEECSSEEEETTSCE-EECSEE
T ss_pred ------------------------------------HHHHHHHHHHHCCCEEEcCCceEEECCCeEEECCCCE-EeeeEE
Confidence 01112334556678999876 8899999999999998 999999
Q ss_pred EEccCCCCCcchhccccchhhhhh--hcCCCCCCccceeee-eeccCcccc
Q 014821 369 ILATGFKGDVKLKNIFLSQTFQDY--LAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 369 i~atG~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
|+|+|+.++ .++... .+.+.++.+.++..+ .+++||||.
T Consensus 263 i~a~G~~~~---------~~l~~~~~~l~~~~G~i~vd~~~~~~~~~~vfa 304 (409)
T 3h8l_A 263 ILLPPYTGN---------PALKNSTPDLVDDGGFIPTDLNMVSIKYDNVYA 304 (409)
T ss_dssp EEECCEECC---------HHHHTSCGGGSCTTSCBCBBTTSBBSSCTTEEE
T ss_pred EECCCCCcc---------HHHHhccccCcCCCCCEEeCcccccCCCCCEEE
Confidence 999999988 334443 333567889998887 669999995
No 64
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=99.90 E-value=3.4e-24 Score=215.93 Aligned_cols=281 Identities=15% Similarity=0.204 Sum_probs=173.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHh-CCCceEEEe--------eCCCCCccccc--cCCcceecCCcccc----ccCCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLL-KGFHPIVFE--------ARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPW 65 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie--------~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~ 65 (418)
|.++||+|||||++|+++|..|++ .|.+|+||| +...+||.|.. +.|...+......+ ....+.+
T Consensus 1 ~~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~a~~~~~~~~~~~~g~ 80 (490)
T 1fec_A 1 SRAYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDLQKHHGPPHYAALGGTCVNVGCVPKKLMVTGANYMDTIRESAGFGW 80 (490)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEESCSSSBTTTBSCTTCHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTE
T ss_pred CccccEEEECCCHHHHHHHHHHHHHcCCEEEEEecccccccccCCCcCccccCCCcchhhHHHHHHHHHHHHHHHHhcCc
Confidence 467899999999999999999999 999999999 34678998765 33332221111110 0111111
Q ss_pred CCCCCCC--CCChhHHHHH-----------HHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCC
Q 014821 66 PDSVTTD--FPDHNQVLDY-----------IQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSR 131 (418)
Q Consensus 66 ~~~~~~~--~~~~~~~~~~-----------l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (418)
... .. ..+...+.++ +....+++ ++ .+..+ .+..++..
T Consensus 81 ~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~gv--~~~~g-~~~~i~~~----------------------- 132 (490)
T 1fec_A 81 ELD--RESVRPNWKALIAAKNKAVSGINDSYEGMFADTEGL--TFHQG-FGALQDNH----------------------- 132 (490)
T ss_dssp ECC--GGGCEECHHHHHHHHHHHHHHHHHHHHHHHHTSTTE--EEEES-EEEEEETT-----------------------
T ss_pred ccC--CcccccCHHHHHHHHHHHHHHHHHHHHHHHhcCCCc--EEEEe-EEEEeeCC-----------------------
Confidence 100 00 1122233322 23334455 65 55553 45555421
Q ss_pred CceEEEEecC--CCCc-eeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEE
Q 014821 132 GKWTVAVEDA--KNHS-TEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTV 208 (418)
Q Consensus 132 ~~~~v~~~~~--~~~~-~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~V 208 (418)
++.+... .++. ..++.||+||+|||+ .|..|+++ |.+ .++++..+... ...+++++|
T Consensus 133 ---~v~v~~~~~~~g~~~~~~~~d~lviAtGs---~p~~p~i~---g~~----~~~~~~~~~~~-------~~~~~~vvV 192 (490)
T 1fec_A 133 ---TVLVRESADPNSAVLETLDTEYILLATGS---WPQHLGIE---GDD----LCITSNEAFYL-------DEAPKRALC 192 (490)
T ss_dssp ---EEEEESSSSTTSCEEEEEEEEEEEECCCE---EECCCCSB---TGG----GCBCHHHHTTC-------SSCCSEEEE
T ss_pred ---EEEEEeeccCCCCceEEEEcCEEEEeCCC---CCCCCCCC---Ccc----ceecHHHHhhh-------hhcCCeEEE
Confidence 2444320 1121 257999999999995 47777777 653 12333222221 234789999
Q ss_pred EcCCCCHHHHHHHHhhh---cCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHH
Q 014821 209 VGLQKSALDIAMECTTA---NGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPL 285 (418)
Q Consensus 209 vG~G~sa~e~a~~l~~~---~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (418)
||+|.+|+|+|..|... +.. |+++.+.+. ++|... . .
T Consensus 193 iGgG~ig~E~A~~l~~~~~~g~~---Vtlv~~~~~-~l~~~d-------~----~------------------------- 232 (490)
T 1fec_A 193 VGGGYISIEFAGIFNAYKARGGQ---VDLAYRGDM-ILRGFD-------S----E------------------------- 232 (490)
T ss_dssp ECSSHHHHHHHHHHHHHSCTTCE---EEEEESSSS-SSTTSC-------H----H-------------------------
T ss_pred ECCCHHHHHHHHHHHhhccCcCe---EEEEEcCCC-cccccC-------H----H-------------------------
Confidence 99999999999999988 654 999999875 333221 0 0
Q ss_pred HHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEcCC
Q 014821 286 RWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQ 359 (418)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~~g 359 (418)
+...+.+.+++.+|+++.+. +..+..+ .|.+++|
T Consensus 233 ----------------------------------------~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G 272 (490)
T 1fec_A 233 ----------------------------------------LRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESG 272 (490)
T ss_dssp ----------------------------------------HHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTS
T ss_pred ----------------------------------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCC
Confidence 01112335566678888885 7777543 3677889
Q ss_pred ceeeeccEEEEccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 360 TTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 360 ~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
++ +++|.||+|+|++|+...+ .+....+. +.++.+.++..+.++.|+||.
T Consensus 273 ~~-i~~D~vv~a~G~~p~~~~L------~l~~~gl~~~~~G~I~Vd~~~~t~~~~IyA 323 (490)
T 1fec_A 273 AE-ADYDVVMLAIGRVPRSQTL------QLEKAGVEVAKNGAIKVDAYSKTNVDNIYA 323 (490)
T ss_dssp CE-EEESEEEECSCEEESCTTS------CGGGGTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred cE-EEcCEEEEccCCCcCcccc------CchhcCccCCCCCCEEECCCCccCCCCEEE
Confidence 87 9999999999999985411 02222222 336778888877778999985
No 65
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=99.90 E-value=2.4e-25 Score=224.40 Aligned_cols=276 Identities=16% Similarity=0.129 Sum_probs=168.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCCCCCCCCCCCCCCCh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~~~~~~~~~ 76 (418)
.+||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+...+..+ .+..+.++. .....+.
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~-~~GGtc~~~gciPsk~l~~~a~~~~~~~~~~~~g~~~--~~~~~~~ 84 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGG-AYGTTCARVGCMPSKLLIAAADASYHASQTDLFGIQV--DRISVNG 84 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCSCEEEEESS-CSSCHHHHHSHHHHHHHHHHHHHHHHHTCGGGGTEEC--SEEEECH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCC-CCCCcccccChhcCHHHHHHHHHHHHHhhhhhcCcCC--CCCccCH
Confidence 379999999999999999999999999999996 59998765 44433322211111 111111111 0111234
Q ss_pred hHHHHHHHHHHHhcCcc---------cceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCcee
Q 014821 77 NQVLDYIQSYASHFDLR---------KHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTE 147 (418)
Q Consensus 77 ~~~~~~l~~~~~~~~~~---------~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 147 (418)
.++.++++...+++... ..-.+...+... +.++|.+.++ .
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~g~a~~~--------------------------~~~~v~~~~~-----~ 133 (492)
T 3ic9_A 85 KAVMKRIQTERDRFVGFVVESVESFDEQDKIRGFAKFL--------------------------DEHTLQVDDH-----S 133 (492)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGEEESCEEEE--------------------------ETTEEEETTT-----E
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcCeeEEEEEEEEe--------------------------cCCEEEEcCC-----c
Confidence 55555555544433210 000111121111 1245666544 6
Q ss_pred EEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcC
Q 014821 148 VHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANG 227 (418)
Q Consensus 148 ~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~ 227 (418)
++.||+||+|||+ .|..|+++ +.. ...++++..+... ...+++|+|||+|.+|+|+|..|...+.
T Consensus 134 ~~~~d~lViATGs---~p~~p~~~---~~~--~~~v~t~~~~~~~-------~~~~k~vvViGgG~ig~E~A~~l~~~g~ 198 (492)
T 3ic9_A 134 QVIAKRIVIATGS---RPNYPEFL---AAA--GSRLLTNDNLFEL-------NDLPKSVAVFGPGVIGLELGQALSRLGV 198 (492)
T ss_dssp EEEEEEEEECCCE---ECCCCHHH---HTT--GGGEECHHHHTTC-------SSCCSEEEEESSCHHHHHHHHHHHHTTC
T ss_pred EEEeCEEEEccCC---CCcCCCCC---Ccc--CCcEEcHHHHhhh-------hhcCCeEEEECCCHHHHHHHHHHHHcCC
Confidence 8999999999995 47777654 322 1235554443332 2457999999999999999999999876
Q ss_pred CCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccC
Q 014821 228 LENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFG 307 (418)
Q Consensus 228 ~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (418)
. |+++.|.+.. ++... . .+
T Consensus 199 ~---Vtlv~~~~~~-l~~~d-------~----~~---------------------------------------------- 217 (492)
T 3ic9_A 199 I---VKVFGRSGSV-ANLQD-------E----EM---------------------------------------------- 217 (492)
T ss_dssp E---EEEECCTTCC-TTCCC-------H----HH----------------------------------------------
T ss_pred e---EEEEEECCcc-cccCC-------H----HH----------------------------------------------
Confidence 5 9999998863 33322 0 00
Q ss_pred CCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--Cc--EEEc--CC--ceeeeccEEEEccCCCCCc
Q 014821 308 MVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG--IVVD--GQ--TTPLKTDLVILATGFKGDV 378 (418)
Q Consensus 308 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~--v~~~--~g--~~~~~~D~Vi~atG~~~~~ 378 (418)
.+.+.+.+++. |+++.+. +..++. ++ +.+. +| ++ +++|.||+|||++|+.
T Consensus 218 -------------------~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~-i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 218 -------------------KRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTT-ESFQYVLAATGRKANV 276 (492)
T ss_dssp -------------------HHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEE-EEESEEEECSCCEESC
T ss_pred -------------------HHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEE-EECCEEEEeeCCccCC
Confidence 01112344555 7777775 666653 23 4443 67 45 9999999999999996
Q ss_pred ch--hccccchhhhhhhcCCCCCCccce-eeeeeccCcccc
Q 014821 379 KL--KNIFLSQTFQDYLAGSPTEKLPLY-RSAHIYIDTLTY 416 (418)
Q Consensus 379 ~~--~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 416 (418)
.+ ++.++.. .+.++.+.++ ..+.++.||||.
T Consensus 277 ~~l~l~~~gl~-------~~~~G~i~vd~~~~~t~~~~IyA 310 (492)
T 3ic9_A 277 DKLGLENTSIE-------LDKKNSPLFDELTLQTSVDHIFV 310 (492)
T ss_dssp SSSCGGGSCCC-------BCTTCCBCCCTTTCBCSSTTEEE
T ss_pred CCCChhhcCCE-------ECCCCCEeECcccccCCCCCEEE
Confidence 54 2222222 1346677777 666788999985
No 66
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=99.90 E-value=2.5e-24 Score=216.44 Aligned_cols=281 Identities=16% Similarity=0.152 Sum_probs=169.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc-----ccCCCCCCCCCCCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY-----QFSDYPWPDSVTTDFPD 75 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~ 75 (418)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|.. +.|...+......+ .+..+.++.. .....+
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~-~~~~~~ 83 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVN-GDIKIN 83 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEEC-SCEEEC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccC-CCCccC
Confidence 589999999999999999999999999999998889998765 22221111100000 0000000000 000111
Q ss_pred hhHHHH-----------HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCC
Q 014821 76 HNQVLD-----------YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNH 144 (418)
Q Consensus 76 ~~~~~~-----------~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 144 (418)
...+.. .+...+++.++ .+++++.+.. +. +.+.|.+.++
T Consensus 84 ~~~~~~~~~~~~~~l~~~~~~~~~~~gv--~~~~g~~~~~---~~----------------------~~v~V~~~~G--- 133 (478)
T 1v59_A 84 VANFQKAKDDAVKQLTGGIELLFKKNKV--TYYKGNGSFE---DE----------------------TKIRVTPVDG--- 133 (478)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESEEEES---SS----------------------SEEEEECCTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEEEEEEc---cC----------------------CeEEEEecCC---
Confidence 222222 23344555676 6666655431 22 3456655433
Q ss_pred ceeE------EEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHH
Q 014821 145 STEV------HQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDI 218 (418)
Q Consensus 145 ~~~~------i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~ 218 (418)
...+ +.||+||+|||+.+ +.+| |.+.....++++.+..... ..+++|+|||+|.+|+|+
T Consensus 134 ~~~~~~~~~~i~~d~lViAtGs~p--~~~~------g~~~~~~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~ 198 (478)
T 1v59_A 134 LEGTVKEDHILDVKNIIVATGSEV--TPFP------GIEIDEEKIVSSTGALSLK-------EIPKRLTIIGGGIIGLEM 198 (478)
T ss_dssp CTTCCSSCEEEEEEEEEECCCEEE--CCCT------TCCCCSSSEECHHHHTTCS-------SCCSEEEEECCSHHHHHH
T ss_pred CcccccccceEEeCEEEECcCCCC--CCCC------CCCCCCceEEcHHHHHhhh-------ccCceEEEECCCHHHHHH
Confidence 1124 99999999999762 2333 3321111355544433321 247899999999999999
Q ss_pred HHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHH
Q 014821 219 AMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIK 298 (418)
Q Consensus 219 a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (418)
|..|...+.. |+++.|++. ++|... ..
T Consensus 199 A~~l~~~g~~---Vtlv~~~~~-~l~~~~-----------~~-------------------------------------- 225 (478)
T 1v59_A 199 GSVYSRLGSK---VTVVEFQPQ-IGASMD-----------GE-------------------------------------- 225 (478)
T ss_dssp HHHHHHTTCE---EEEECSSSS-SSSSSC-----------HH--------------------------------------
T ss_pred HHHHHHcCCE---EEEEEeCCc-cccccC-----------HH--------------------------------------
Confidence 9999998765 999999885 333221 00
Q ss_pred hhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--C----cEEEc-----CCceeeecc
Q 014821 299 KKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--D----GIVVD-----GQTTPLKTD 366 (418)
Q Consensus 299 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~----~v~~~-----~g~~~~~~D 366 (418)
+.+.+.+.+++.+|+++.+. +..+.. + .+.++ ++++ +++|
T Consensus 226 ---------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~-~~~D 277 (478)
T 1v59_A 226 ---------------------------VAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQEN-LEAE 277 (478)
T ss_dssp ---------------------------HHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEE-EEES
T ss_pred ---------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceE-EECC
Confidence 00112234455678888775 667654 2 24554 3456 9999
Q ss_pred EEEEccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 367 LVILATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 367 ~Vi~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.||+|+|++|+... .++....+. +.++.+.++..+.++.||||.
T Consensus 278 ~vv~a~G~~p~~~~------l~l~~~g~~~~~~G~i~vd~~~~t~~~~IyA 322 (478)
T 1v59_A 278 VLLVAVGRRPYIAG------LGAEKIGLEVDKRGRLVIDDQFNSKFPHIKV 322 (478)
T ss_dssp EEEECSCEEECCTT------SCTTTTTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred EEEECCCCCcCCCC------CCchhcCceeCCCCCEeECcCCccCCCCEEE
Confidence 99999999999540 022222222 335678888777788999986
No 67
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=99.90 E-value=5.9e-24 Score=213.98 Aligned_cols=279 Identities=18% Similarity=0.223 Sum_probs=169.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC-------C--CCCccccc--cCCcceecCCcccc----ccCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR-------S--DIGGAWIK--TVETTMLQTPKQLY----QFSDYPWP 66 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~-------~--~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~ 66 (418)
..+||+|||||++|+++|..|++.|.+|+|||+. . .+||.|.. +.|...+..+...+ ....+.+.
T Consensus 8 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~~~~g~~ 87 (483)
T 3dgh_A 8 YDYDLIVIGGGSAGLACAKEAVLNGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEAAAYGWN 87 (483)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHHHhcCcc
Confidence 3589999999999999999999999999999942 1 37888876 33433222211111 01111111
Q ss_pred CCCCCCCCChhHHHHHHHHHHHh-----------cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE
Q 014821 67 DSVTTDFPDHNQVLDYIQSYASH-----------FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (418)
Q Consensus 67 ~~~~~~~~~~~~~~~~l~~~~~~-----------~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (418)
.. .....+...+..+.+.+.+. .++ .+. ...+..++. ..+.
T Consensus 88 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~-~g~a~~~~~------------------------~~v~ 139 (483)
T 3dgh_A 88 VD-DKIKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKV--EYI-NGLGSFVDS------------------------HTLL 139 (483)
T ss_dssp CC-CCCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CSEEEEEET------------------------TEEE
T ss_pred cC-CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-EeEEEEccC------------------------CEEE
Confidence 11 11223444555544444332 233 222 234433332 2244
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCH
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSA 215 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa 215 (418)
|...++ . .++.||+||+|||+ .|..|+++ |.+.+ .+++..+.. ....+++++|||+|.+|
T Consensus 140 v~~~~g---~-~~~~~d~lviATGs---~p~~p~i~---G~~~~---~~~~~~~~~-------~~~~~~~vvViGgG~~g 199 (483)
T 3dgh_A 140 AKLKSG---E-RTITAQTFVIAVGG---RPRYPDIP---GAVEY---GITSDDLFS-------LDREPGKTLVVGAGYIG 199 (483)
T ss_dssp EECTTC---C-EEEEEEEEEECCCE---EECCCSST---THHHH---CBCHHHHTT-------CSSCCCEEEEECCSHHH
T ss_pred EEeCCC---e-EEEEcCEEEEeCCC---CcCCCCCC---Ccccc---cCcHHHHhh-------hhhcCCcEEEECCCHHH
Confidence 543332 2 57999999999995 57777777 76432 233333222 12357899999999999
Q ss_pred HHHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHH
Q 014821 216 LDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEA 295 (418)
Q Consensus 216 ~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (418)
+|+|..|...+.. |+++.|+. +++... . .
T Consensus 200 ~E~A~~l~~~g~~---Vtlv~~~~--~l~~~d-------~----~----------------------------------- 228 (483)
T 3dgh_A 200 LECAGFLKGLGYE---PTVMVRSI--VLRGFD-------Q----Q----------------------------------- 228 (483)
T ss_dssp HHHHHHHHHTTCE---EEEEESSC--SSTTSC-------H----H-----------------------------------
T ss_pred HHHHHHHHHcCCE---EEEEeCCC--CCcccC-------H----H-----------------------------------
Confidence 9999999998765 99999843 333222 0 0
Q ss_pred HHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--Cc---EEEcCCc-----eeee
Q 014821 296 DIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG---IVVDGQT-----TPLK 364 (418)
Q Consensus 296 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~---v~~~~g~-----~~~~ 364 (418)
+.+.+.+.+++.+|+++.+. +..+.. ++ |.+.++. + ++
T Consensus 229 ------------------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~-~~ 277 (483)
T 3dgh_A 229 ------------------------------MAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESE-DV 277 (483)
T ss_dssp ------------------------------HHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEE-EE
T ss_pred ------------------------------HHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeE-EE
Confidence 00112234455667777775 666653 22 6666553 5 89
Q ss_pred ccEEEEccCCCCCcchhccccchhhhhhhcCCCCCCccceeeeeeccCcccc
Q 014821 365 TDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 365 ~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|.||+|+|++|+..++. +....+....+.+.++..+.++.||||.
T Consensus 278 ~D~vi~a~G~~p~~~~l~------l~~~gl~~~~G~i~vd~~~~t~~~~IyA 323 (483)
T 3dgh_A 278 YDTVLWAIGRKGLVDDLN------LPNAGVTVQKDKIPVDSQEATNVANIYA 323 (483)
T ss_dssp ESEEEECSCEEECCGGGT------GGGTTCCCBTTBBCCCTTCBCSSTTEEE
T ss_pred cCEEEECcccccCcCcCC------chhcCccccCCEEEECcCCccCCCCEEE
Confidence 999999999999854431 1222232333778888778889999996
No 68
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=7.4e-24 Score=214.04 Aligned_cols=277 Identities=12% Similarity=0.146 Sum_probs=163.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcc----ccccCCCCCCCCCCCCCCCh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQ----LYQFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~----~~~~~~~~~~~~~~~~~~~~ 76 (418)
++||+|||||++|+++|..|++.|.+|+|||++ .+||.|.. +.|...+..... ...+..+.+... .....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~-~~GG~c~~~gc~P~k~l~~~a~~~~~~~~~~~~g~~~~---~~~~~ 77 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKS-RLGGTCVNVGCVPKKIMFNAASVHDILENSRHYGFDTK---FSFNL 77 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-STTHHHHHTSHHHHHHHHHHHHHHHHHHHGGGGTCCCC---CCCCH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCC-CcCccccccCCcchHHHHHHHHHHHHHHhhHhcCCccC---CccCH
Confidence 389999999999999999999999999999997 58998865 222211110000 001111112110 11122
Q ss_pred hHHH-----------HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecC----
Q 014821 77 NQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA---- 141 (418)
Q Consensus 77 ~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---- 141 (418)
..+. .++....++.++ .+..++ +..++. +.+.+.+.
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~-~~~id~--------------------------~~v~v~~~~~~~ 128 (500)
T 1onf_A 78 PLLVERRDKYIQRLNNIYRQNLSKDKV--DLYEGT-ASFLSE--------------------------NRILIKGTKDNN 128 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEESC-CCCC----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeE-EEEeeC--------------------------CEEEEEeccccc
Confidence 2222 223333445565 444432 222221 12333220
Q ss_pred ----CCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 142 ----KNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 142 ----~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
.++...++.||+||+|||+ .|..|+++ |.+ .++++.++.... . +++|+|||+|.+|+|
T Consensus 129 ~~~~~~~~~~~~~~d~lViAtGs---~p~~p~i~---G~~----~~~~~~~~~~~~-------~-~~~vvViGgG~ig~E 190 (500)
T 1onf_A 129 NKDNGPLNEEILEGRNILIAVGN---KPVFPPVK---GIE----NTISSDEFFNIK-------E-SKKIGIVGSGYIAVE 190 (500)
T ss_dssp ------------CBSSEEECCCC---CBCCCSCT---TGG----GCEEHHHHTTCC-------C-CSEEEEECCSHHHHH
T ss_pred cccccCCCceEEEeCEEEECCCC---CCCCCCCC---CCC----cccCHHHHhccC-------C-CCeEEEECChHHHHH
Confidence 0011247899999999994 57777777 653 245544443321 2 789999999999999
Q ss_pred HHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHH
Q 014821 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (418)
+|..|...+.. |+++.|.+.. ++... . .
T Consensus 191 ~A~~l~~~g~~---Vtlv~~~~~~-l~~~d-------~----~------------------------------------- 218 (500)
T 1onf_A 191 LINVIKRLGID---SYIFARGNRI-LRKFD-------E----S------------------------------------- 218 (500)
T ss_dssp HHHHHHTTTCE---EEEECSSSSS-CTTSC-------H----H-------------------------------------
T ss_pred HHHHHHHcCCe---EEEEecCCcc-Ccccc-------h----h-------------------------------------
Confidence 99999988765 9999998753 34322 0 0
Q ss_pred HhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEEEcCCceeeeccEEEEc
Q 014821 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIVVDGQTTPLKTDLVILA 371 (418)
Q Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~~~~g~~~~~~D~Vi~a 371 (418)
+.+.+.+.+++.+|+++.+. +..+..+ .+.+++|++.+++|.||+|
T Consensus 219 ----------------------------~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a 270 (500)
T 1onf_A 219 ----------------------------VINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYC 270 (500)
T ss_dssp ----------------------------HHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEEC
T ss_pred ----------------------------hHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEEC
Confidence 01112335566678888886 7777542 3667788644899999999
Q ss_pred cCCCCCcchhccccchhhhhhhcCCCCCCccceeeeeeccCcccc
Q 014821 372 TGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 372 tG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|++|+.+.+ .+....+....+.+.++..+.++.|+||.
T Consensus 271 ~G~~p~~~~l------~~~~~g~~~~~G~i~vd~~~~t~~~~iya 309 (500)
T 1onf_A 271 VGRSPDTENL------KLEKLNVETNNNYIVVDENQRTSVNNIYA 309 (500)
T ss_dssp CCBCCTTTTS------SCTTTTCCBSSSCEEECTTCBCSSSSEEE
T ss_pred CCCCcCCCCC------CchhcCccccCCEEEECCCcccCCCCEEE
Confidence 9999995310 01222222345667787777788999985
No 69
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=99.90 E-value=1.5e-23 Score=210.79 Aligned_cols=271 Identities=16% Similarity=0.224 Sum_probs=167.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++||+|||||++|+++|..|++. +.+|+|||+.+..+..... . +. ... ........+.
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~-~-------~~---~~~---------~~~~~~~~l~ 95 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCG-L-------PY---VIS---------GAIASTEKLI 95 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGG-H-------HH---HHT---------TSSSCGGGGB
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCC-c-------ch---hhc---------CCcCCHHHhh
Confidence 47999999999999999999996 8899999998755421110 0 00 000 0001111111
Q ss_pred -HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeec
Q 014821 81 -DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 81 -~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
.+.+.+.+++++ .++++++|..++... + .|.+.+..++...++.||+||+|||
T Consensus 96 ~~~~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~--~v~v~~~~~g~~~~~~~d~lviAtG 149 (480)
T 3cgb_A 96 ARNVKTFRDKYGI--DAKVRHEVTKVDTEK----------------------K--IVYAEHTKTKDVFEFSYDRLLIATG 149 (480)
T ss_dssp SSCHHHHHHTTCC--EEESSEEEEEEETTT----------------------T--EEEEEETTTCCEEEEECSEEEECCC
T ss_pred hcCHHHHHhhcCC--EEEeCCEEEEEECCC----------------------C--EEEEEEcCCCceEEEEcCEEEECCC
Confidence 123334455677 788889999998655 3 3444431223334799999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhh--cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEe
Q 014821 160 RFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANL--VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYR 237 (418)
Q Consensus 160 ~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r 237 (418)
+ .|..|+++ |.+. ..+++...+.+.. ...... ..+++|+|||+|.+|+|+|..|...+.. |+++.+
T Consensus 150 ~---~p~~p~i~---G~~~--~~v~~~~~~~~~~-~l~~~~~~~~~~~vvViGgG~~g~e~A~~l~~~g~~---Vtlv~~ 217 (480)
T 3cgb_A 150 V---RPVMPEWE---GRDL--QGVHLLKTIPDAE-RILKTLETNKVEDVTIIGGGAIGLEMAETFVELGKK---VRMIER 217 (480)
T ss_dssp E---EECCCCCB---TTTS--BTEECCSSHHHHH-HHHHHHHSSCCCEEEEECCHHHHHHHHHHHHHTTCE---EEEECC
T ss_pred C---cccCCCCC---CccC--CCEEEeCCHHHHH-HHHHHhhhcCCCeEEEECCCHHHHHHHHHHHhcCCe---EEEEEe
Confidence 5 47777777 6542 1244432222111 000111 2689999999999999999999988765 999999
Q ss_pred cCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccc
Q 014821 238 TEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQE 317 (418)
Q Consensus 238 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 317 (418)
.+. +.+... . .
T Consensus 218 ~~~-~l~~~~-------~----~--------------------------------------------------------- 228 (480)
T 3cgb_A 218 NDH-IGTIYD-------G----D--------------------------------------------------------- 228 (480)
T ss_dssp GGG-TTSSSC-------H----H---------------------------------------------------------
T ss_pred CCc-hhhcCC-------H----H---------------------------------------------------------
Confidence 875 333211 0 0
Q ss_pred cccccccccCcchhhhhccCcEEEeccC-ceeEecCc-E--EEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhh
Q 014821 318 LSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG-I--VVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL 393 (418)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~-v--~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~ 393 (418)
+.+.+.+.+++.+|+++.+. +..++.++ + ...++.+ +++|.||+|+|++++..+++.++..
T Consensus 229 --------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~~~~-i~~D~vi~a~G~~p~~~~l~~~g~~------ 293 (480)
T 3cgb_A 229 --------MAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETDKGT-YKADLVLVSVGVKPNTDFLEGTNIR------ 293 (480)
T ss_dssp --------HHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEETTEE-EECSEEEECSCEEESCGGGTTSCCC------
T ss_pred --------HHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEECCCE-EEcCEEEECcCCCcChHHHHhCCcc------
Confidence 00111234455567777765 66665433 2 2234556 9999999999999985544332222
Q ss_pred cCCCCCCccceeeeeeccCcccc
Q 014821 394 AGSPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 394 ~~~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.+.++.+.++..+.++.|+||.
T Consensus 294 -~~~~G~I~Vd~~~~ts~p~IyA 315 (480)
T 3cgb_A 294 -TNHKGAIEVNAYMQTNVQDVYA 315 (480)
T ss_dssp -BCTTSCBCCCTTSBCSSTTEEE
T ss_pred -cCCCCCEEECCCccCCCCCEEE
Confidence 1345678888777778999985
No 70
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=99.90 E-value=2.3e-24 Score=215.36 Aligned_cols=277 Identities=14% Similarity=0.154 Sum_probs=167.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccccc---CCCCCCCCCCCCCCChh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQF---SDYPWPDSVTTDFPDHN 77 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~ 77 (418)
++||+|||||++|+++|..|++.|.+|+|||+++.+||.|.. +.|...+......+.. ..+.++.. ....+..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~g~~~~--~~~~~~~ 78 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK--GVELDLP 78 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHCCTTEEEC--CEEECHH
T ss_pred CCCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhhhcCCcccC--CCccCHH
Confidence 379999999999999999999999999999998889998876 2332211111100000 01111000 0001122
Q ss_pred HHHH-----------HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCce
Q 014821 78 QVLD-----------YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHST 146 (418)
Q Consensus 78 ~~~~-----------~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 146 (418)
.+.. .+...+++.++ .+..++. ..+ + .+.+.|.. ++
T Consensus 79 ~~~~~~~~~~~~l~~~~~~~~~~~~v--~~~~g~~-~~i---~---------------------~~~~~v~~-~g----- 125 (455)
T 2yqu_A 79 ALMAHKDKVVQANTQGVEFLFKKNGI--ARHQGTA-RFL---S---------------------ERKVLVEE-TG----- 125 (455)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTC--EEEESCE-EES---S---------------------SSEEEETT-TC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEeEE-EEe---c---------------------CCeEEEee-CC-----
Confidence 2222 22344445566 5555432 222 1 12344432 22
Q ss_pred eEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhc
Q 014821 147 EVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTAN 226 (418)
Q Consensus 147 ~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~ 226 (418)
.++.||+||+|||+. |..|+++ +.+. ..++++.++.... ..+++|+|||+|.+|+|+|..|...+
T Consensus 126 ~~~~~d~lviAtG~~---p~~~~~~---g~~~--~~v~~~~~~~~~~-------~~~~~vvIiGgG~~g~e~A~~l~~~g 190 (455)
T 2yqu_A 126 EELEARYILIATGSA---PLIPPWA---QVDY--ERVVTSTEALSFP-------EVPKRLIVVGGGVIGLELGVVWHRLG 190 (455)
T ss_dssp CEEEEEEEEECCCEE---ECCCTTB---CCCS--SSEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHHHHHHTT
T ss_pred EEEEecEEEECCCCC---CCCCCCC---CCCc--CcEechHHhhccc-------cCCCeEEEECCCHHHHHHHHHHHHcC
Confidence 579999999999964 6666666 5432 1355544433321 34689999999999999999999887
Q ss_pred CCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 014821 227 GLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKF 306 (418)
Q Consensus 227 ~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (418)
.. |+++.+.+. ++|... ..+
T Consensus 191 ~~---V~lv~~~~~-~l~~~~-----------~~~--------------------------------------------- 210 (455)
T 2yqu_A 191 AE---VIVLEYMDR-ILPTMD-----------LEV--------------------------------------------- 210 (455)
T ss_dssp CE---EEEECSSSS-SCTTSC-----------HHH---------------------------------------------
T ss_pred CE---EEEEecCCc-cccccC-----------HHH---------------------------------------------
Confidence 65 999999875 333221 000
Q ss_pred CCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--Cc--EEEcCCceeeeccEEEEccCCCCCcchh
Q 014821 307 GMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG--IVVDGQTTPLKTDLVILATGFKGDVKLK 381 (418)
Q Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~--v~~~~g~~~~~~D~Vi~atG~~~~~~~~ 381 (418)
.+.+.+.+++.+|+++.+. +..++. ++ +.+++|++ +++|.||+|||++++..+.
T Consensus 211 --------------------~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~~D~vv~A~G~~p~~~~l 269 (455)
T 2yqu_A 211 --------------------SRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEV-LEADRVLVAVGRRPYTEGL 269 (455)
T ss_dssp --------------------HHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCE-EEESEEEECSCEEECCTTC
T ss_pred --------------------HHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeE-EEcCEEEECcCCCcCCCCC
Confidence 0111223344567777775 666653 23 45567888 9999999999999985431
Q ss_pred ccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 382 NIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 382 ~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
. ++...+. +.++.+.++..+.++.|+||.
T Consensus 270 ~------~~~~g~~~~~~g~i~vd~~~~t~~~~iya 299 (455)
T 2yqu_A 270 S------LENAGLSTDERGRIPVDEHLRTRVPHIYA 299 (455)
T ss_dssp C------GGGGTCCCCTTSCCCCCTTSBCSSTTEEE
T ss_pred C------hhhcCCccCCCCcEeECCCcccCCCCEEE
Confidence 0 1222222 234667777777778899985
No 71
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=99.90 E-value=9.3e-24 Score=212.57 Aligned_cols=273 Identities=14% Similarity=0.129 Sum_probs=170.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccc----cccCCCCCCCCCCCCCCCh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL----YQFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~ 76 (418)
.+||+|||||++|+++|..|++.|.+|+|||+ ..+||.|.. +.|...+...... ..+..+.+... ......
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~~--~~~~~~ 102 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGKRVAIAEE-YRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKYA--DPIFNW 102 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCCC--CCEECH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcCEEEEEeC-CCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCcccC--CCccCH
Confidence 57999999999999999999999999999999 789998776 3333222111110 01111212110 001111
Q ss_pred hH-----------HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEe-cCCCC
Q 014821 77 NQ-----------VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE-DAKNH 144 (418)
Q Consensus 77 ~~-----------~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~ 144 (418)
.. +..++....++.++ .+.. ..+..++. ..+.+. ++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~-g~~~~i~~--------------------------~~v~v~~~~--- 150 (484)
T 3o0h_A 103 EKLVAAKNKEISRLEGLYREGLQNSNV--HIYE-SRAVFVDE--------------------------HTLELSVTG--- 150 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTC--EEEE-SCEEEEET--------------------------TEEEETTTC---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEE-eEEEEeeC--------------------------CEEEEecCC---
Confidence 22 22333444444555 4444 35555442 235554 33
Q ss_pred ceeEEEeCEEEEeeccCCCCCC-CCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHh
Q 014821 145 STEVHQVDFVILCVGRFSDVPN-IPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~~~p~-~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~ 223 (418)
..+.+|+||+|||+. |. .|.++ |.+. +.++..+.. ....+++++|||+|.+|+|+|..|.
T Consensus 151 --~~~~~d~lviAtG~~---p~~~p~i~---G~~~----~~~~~~~~~-------~~~~~~~v~ViGgG~~g~e~A~~l~ 211 (484)
T 3o0h_A 151 --ERISAEKILIATGAK---IVSNSAIK---GSDL----CLTSNEIFD-------LEKLPKSIVIVGGGYIGVEFANIFH 211 (484)
T ss_dssp --CEEEEEEEEECCCEE---ECCC--CB---TGGG----SBCTTTGGG-------CSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred --eEEEeCEEEEccCCC---cccCCCCC---Cccc----cccHHHHHh-------HHhcCCcEEEECcCHHHHHHHHHHH
Confidence 589999999999954 66 67666 6542 222222222 2245789999999999999999999
Q ss_pred hhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 224 ~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
..+.. |+++.+.+.+ ++... ..
T Consensus 212 ~~g~~---Vtli~~~~~~-l~~~~-----------~~------------------------------------------- 233 (484)
T 3o0h_A 212 GLGVK---TTLLHRGDLI-LRNFD-----------YD------------------------------------------- 233 (484)
T ss_dssp HTTCE---EEEECSSSSS-STTSC-----------HH-------------------------------------------
T ss_pred HcCCe---EEEEECCCcc-ccccC-----------HH-------------------------------------------
Confidence 88765 9999988753 23221 00
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC----cEEEcCCceeeeccEEEEccCCCCCc
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED----GIVVDGQTTPLKTDLVILATGFKGDV 378 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~----~v~~~~g~~~~~~D~Vi~atG~~~~~ 378 (418)
+.+.+.+.+++.+|+++.+. +..++.+ .|.+++|++ +++|.||+|+|++++.
T Consensus 234 ----------------------~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~-i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 234 ----------------------LRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQT-ICADRVMLATGRVPNT 290 (484)
T ss_dssp ----------------------HHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCE-EEESEEEECCCEEECC
T ss_pred ----------------------HHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcE-EEcCEEEEeeCCCcCC
Confidence 01112234455578888765 7777654 377889988 9999999999999985
Q ss_pred chhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 379 KLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 379 ~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
.++. +....+. +.++.+.++..+.++.||||.
T Consensus 291 ~~l~------l~~~g~~~~~~G~i~vd~~~~t~~~~Iya 323 (484)
T 3o0h_A 291 TGLG------LERAGVKVNEFGAVVVDEKMTTNVSHIWA 323 (484)
T ss_dssp TTCC------HHHHTCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred CCCC------hhhcCceECCCCCEeECCCCCCCCCCEEE
Confidence 4311 2222222 345678888777889999996
No 72
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=99.90 E-value=5.7e-24 Score=212.60 Aligned_cols=272 Identities=15% Similarity=0.214 Sum_probs=166.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCcccc----ccCC---CCCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLY----QFSD---YPWPDSVTTD 72 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~---~~~~~~~~~~ 72 (418)
.++||+|||||++|+++|..|++.|.+|+|||+ +.+||.|.. +.|...+......+ .+.. +.++.. ..
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~-~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~~g~~~~--~~ 80 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEG-QALGGTCLNIGCIPSKALIHVAEQFHQASRFTEPSPLGISVA--SP 80 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECS-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHTTSCCTTCCCCC--CC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEcc-CCCCCcCCCcCcHhHHHHHHHHHHHHHHhhcccccccCcccC--CC
Confidence 468999999999999999999999999999999 789999875 23322211111111 1111 222211 11
Q ss_pred CCChhHHHHH-----------HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecC
Q 014821 73 FPDHNQVLDY-----------IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA 141 (418)
Q Consensus 73 ~~~~~~~~~~-----------l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 141 (418)
..+...+..+ +....+++++ .+..++.+ .++ . ++|.+.+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g~~~-~~~--~------------------------~~v~v~~- 130 (458)
T 1lvl_A 81 RLDIGQSVAWKDGIVDRLTTGVAALLKKHGV--KVVHGWAK-VLD--G------------------------KQVEVDG- 130 (458)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEECSCEE-EEE--T------------------------TEEEETT-
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCc--EEEEEEEE-Ecc--C------------------------CEEEEee-
Confidence 2233333333 2344555676 56654433 232 2 3455533
Q ss_pred CCCceeEEEeCEEEEeeccCCCCCCCCC-CCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHH
Q 014821 142 KNHSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAM 220 (418)
Q Consensus 142 ~~~~~~~i~~d~vIlAtG~~~~~p~~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~ 220 (418)
.++.||+||+|||+. |..|+ ++ . + +.++++.++.... ..+++|+|||+|.+|+|+|.
T Consensus 131 -----~~~~~d~lviATGs~---p~~~~~~~---~-~---~~v~~~~~~~~~~-------~~~~~vvViGgG~~g~e~A~ 188 (458)
T 1lvl_A 131 -----QRIQCEHLLLATGSS---SVELPMLP---L-G---GPVISSTEALAPK-------ALPQHLVVVGGGYIGLELGI 188 (458)
T ss_dssp -----EEEECSEEEECCCEE---ECCBTTBC---C-B---TTEECHHHHTCCS-------SCCSEEEEECCSHHHHHHHH
T ss_pred -----EEEEeCEEEEeCCCC---CCCCCCCC---c-c---CcEecHHHHhhhh-------ccCCeEEEECcCHHHHHHHH
Confidence 479999999999964 55554 33 1 1 1355554443322 35789999999999999999
Q ss_pred HHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhh
Q 014821 221 ECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKK 300 (418)
Q Consensus 221 ~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (418)
.|...+.. |+++.+++. ++|... ..+
T Consensus 189 ~l~~~g~~---Vtlv~~~~~-~l~~~~-----------~~~--------------------------------------- 214 (458)
T 1lvl_A 189 AYRKLGAQ---VSVVEARER-ILPTYD-----------SEL--------------------------------------- 214 (458)
T ss_dssp HHHHHTCE---EEEECSSSS-SSTTSC-----------HHH---------------------------------------
T ss_pred HHHHCCCe---EEEEEcCCc-cccccC-----------HHH---------------------------------------
Confidence 99998765 999999875 333221 000
Q ss_pred hhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCcEEEc--CC--ceeeeccEEEEccCCC
Q 014821 301 HRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVD--GQ--TTPLKTDLVILATGFK 375 (418)
Q Consensus 301 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~--~g--~~~~~~D~Vi~atG~~ 375 (418)
.+.+.+.+++.+|+++.+. +..++.+.+.+. +| ++ +++|.||+|||++
T Consensus 215 --------------------------~~~l~~~l~~~gv~i~~~~~v~~i~~~~v~v~~~~G~~~~-i~~D~vv~a~G~~ 267 (458)
T 1lvl_A 215 --------------------------TAPVAESLKKLGIALHLGHSVEGYENGCLLANDGKGGQLR-LEADRVLVAVGRR 267 (458)
T ss_dssp --------------------------HHHHHHHHHHHTCEEETTCEEEEEETTEEEEECSSSCCCE-ECCSCEEECCCEE
T ss_pred --------------------------HHHHHHHHHHCCCEEEECCEEEEEEeCCEEEEECCCceEE-EECCEEEECcCCC
Confidence 0111223445567777775 677765335444 56 46 9999999999999
Q ss_pred CCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 376 GDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 376 ~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
|+..+. .++...+. +.+ .+.++..+.++.|+||.
T Consensus 268 p~~~~l------~~~~~g~~~~~~-~i~vd~~~~t~~~~Iya 302 (458)
T 1lvl_A 268 PRTKGF------NLECLDLKMNGA-AIAIDERCQTSMHNVWA 302 (458)
T ss_dssp ECCSSS------SGGGSCCCEETT-EECCCTTCBCSSTTEEE
T ss_pred cCCCCC------CcHhcCCcccCC-EEeECCCCcCCCCCEEE
Confidence 995431 01111111 122 56666666778899985
No 73
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=99.90 E-value=6.3e-24 Score=214.01 Aligned_cols=280 Identities=15% Similarity=0.157 Sum_probs=170.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEee--------CCCCCccccc--cCCcceecCCcccc----ccCCCCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEA--------RSDIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS 68 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~--------~~~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~ 68 (418)
.+||+|||||++|+++|..|++.|.+|+|||+ ...+||.|.. +.|...+......+ ....+.+...
T Consensus 6 ~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~~~~g~~~~ 85 (488)
T 3dgz_A 6 SFDLLVIGGGSGGLACAKEAAQLGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDAHHYGWEVA 85 (488)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCCC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHHHhcCcccC
Confidence 58999999999999999999999999999997 4578998876 34443332211111 1112222211
Q ss_pred CCCCCCChhHHHHHHHHHHH-----------hcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 69 VTTDFPDHNQVLDYIQSYAS-----------HFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 69 ~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.........+..+.+.+.+ ..++ .+ +...+..++. ..+.|.
T Consensus 86 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~~-i~g~~~~~~~------------------------~~v~v~ 137 (488)
T 3dgz_A 86 -QPVQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKV--KY-FNIKASFVDE------------------------HTVRGV 137 (488)
T ss_dssp -SSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECCEEEESSS------------------------SEEEEE
T ss_pred -CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EEEEEEEccC------------------------CeEEEE
Confidence 1123344455554443332 2233 22 2233333221 223443
Q ss_pred EecCCCCceeEEEeCEEEEeeccCCCCCCCCC-CCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHH
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPE-FPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSAL 216 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~ 216 (418)
.. ++...++.||+||||||+ .|..|+ ++ |.+.+ .+++..+... ...+++++|||+|.+|+
T Consensus 138 ~~---~g~~~~~~~d~lViATGs---~p~~p~~i~---G~~~~---~~~~~~~~~~-------~~~~~~vvViGgG~ig~ 198 (488)
T 3dgz_A 138 DK---GGKATLLSAEHIVIATGG---RPRYPTQVK---GALEY---GITSDDIFWL-------KESPGKTLVVGASYVAL 198 (488)
T ss_dssp CT---TSCEEEEEEEEEEECCCE---EECCCSSCB---THHHH---CBCHHHHTTC-------SSCCCSEEEECCSHHHH
T ss_pred eC---CCceEEEECCEEEEcCCC---CCCCCCCCC---Ccccc---cCcHHHHHhh-------hhcCCeEEEECCCHHHH
Confidence 32 234468999999999995 577776 77 65432 2333333221 23467899999999999
Q ss_pred HHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHH
Q 014821 217 DIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEAD 296 (418)
Q Consensus 217 e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (418)
|+|..|...+.. |+++.|.. +++... . .
T Consensus 199 E~A~~l~~~g~~---Vtlv~~~~--~l~~~d-------~----~------------------------------------ 226 (488)
T 3dgz_A 199 ECAGFLTGIGLD---TTVMMRSI--PLRGFD-------Q----Q------------------------------------ 226 (488)
T ss_dssp HHHHHHHHTTCC---EEEEESSC--SSTTSC-------H----H------------------------------------
T ss_pred HHHHHHHHcCCc---eEEEEcCc--ccccCC-------H----H------------------------------------
Confidence 999999998765 99999864 333222 0 0
Q ss_pred HHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec---Cc--EEEcC---Cce-eeecc
Q 014821 297 IKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE---DG--IVVDG---QTT-PLKTD 366 (418)
Q Consensus 297 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~---~~--v~~~~---g~~-~~~~D 366 (418)
+.+.+.+.+++.+|+++.+. +..+.. +. +.+.+ |+. .+++|
T Consensus 227 -----------------------------~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D 277 (488)
T 3dgz_A 227 -----------------------------MSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFD 277 (488)
T ss_dssp -----------------------------HHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEES
T ss_pred -----------------------------HHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECC
Confidence 01112234556678887774 566643 22 45544 552 27899
Q ss_pred EEEEccCCCCCcchhccccchhhhhhhcC-C-CCCCccceeeeeeccCcccc
Q 014821 367 LVILATGFKGDVKLKNIFLSQTFQDYLAG-S-PTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 367 ~Vi~atG~~~~~~~~~~l~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~ 416 (418)
.||+|||++|+..++. +....+. + .++.+.++..+.++.||||.
T Consensus 278 ~vi~a~G~~p~~~~l~------l~~~g~~~~~~~G~i~vd~~~~t~~~~IyA 323 (488)
T 3dgz_A 278 TVLWAIGRVPETRTLN------LEKAGISTNPKNQKIIVDAQEATSVPHIYA 323 (488)
T ss_dssp EEEECSCEEESCGGGT------GGGGTCCBCSSSCCBCCCTTSBCSSTTEEE
T ss_pred EEEEcccCCcccCcCC------ccccCcEecCCCCeEeECCCCccCCCCEEE
Confidence 9999999999954321 1222222 3 46778888877889999995
No 74
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=99.90 E-value=7.2e-24 Score=214.98 Aligned_cols=280 Identities=17% Similarity=0.193 Sum_probs=168.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC--------CCCccccc--cCCcceecCCcccc----ccCCCCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS--------DIGGAWIK--TVETTMLQTPKQLY----QFSDYPWPDS 68 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~--------~~gg~~~~--~~~~~~l~~~~~~~----~~~~~~~~~~ 68 (418)
.+||+|||||++|+++|..|++.|.+|+|||+++ .+||.|.. +.|...+..+...+ .+..+.+...
T Consensus 32 ~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~~~~g~~~~ 111 (519)
T 3qfa_A 32 DYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDSRNYGWKVE 111 (519)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTBCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHHHhcCcccC
Confidence 5899999999999999999999999999999954 68888776 34433332221111 1112222211
Q ss_pred CCCCCCChhHHHHHHHHHHH-----------hcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 69 VTTDFPDHNQVLDYIQSYAS-----------HFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 69 ~~~~~~~~~~~~~~l~~~~~-----------~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.....+...+..+.+.+.+ ..++ .+. ...+..++... +.|.
T Consensus 112 -~~~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV--~~i-~g~a~~~d~~~------------------------v~v~ 163 (519)
T 3qfa_A 112 -ETVKHDWDRMIEAVQNHIGSLNWGYRVALREKKV--VYE-NAYGQFIGPHR------------------------IKAT 163 (519)
T ss_dssp -SSCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CSEEEEEETTE------------------------EEEE
T ss_pred -CcCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEE-EEEEEEeeCCE------------------------EEEE
Confidence 1122344455554443322 2343 232 34454444322 4443
Q ss_pred EecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
..+ +...++.||+||||||+ .|..|+++ |...+ ++++..+..+ ...+++++|||+|.+|+|
T Consensus 164 ~~~---g~~~~i~~d~lViATGs---~p~~p~i~---G~~~~---~~t~~~~~~l-------~~~~~~vvVIGgG~ig~E 224 (519)
T 3qfa_A 164 NNK---GKEKIYSAERFLIATGE---RPRYLGIP---GDKEY---CISSDDLFSL-------PYCPGKTLVVGASYVALE 224 (519)
T ss_dssp CTT---CCCCEEEEEEEEECCCE---EECCCCCT---THHHH---CBCHHHHTTC-------SSCCCSEEEECCSHHHHH
T ss_pred cCC---CCEEEEECCEEEEECCC---CcCCCCCC---CccCc---eEcHHHHhhh-------hhcCCeEEEECCcHHHHH
Confidence 322 33458999999999995 57777777 65432 3333333221 234678999999999999
Q ss_pred HHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHH
Q 014821 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (418)
+|..|...+.. |+++.|+. +++... . .
T Consensus 225 ~A~~l~~~G~~---Vtlv~~~~--~l~~~d-------~----~------------------------------------- 251 (519)
T 3qfa_A 225 CAGFLAGIGLD---VTVMVRSI--LLRGFD-------Q----D------------------------------------- 251 (519)
T ss_dssp HHHHHHHTTCC---EEEEESSC--SSTTSC-------H----H-------------------------------------
T ss_pred HHHHHHHcCCe---EEEEeccc--ccccCC-------H----H-------------------------------------
Confidence 99999998765 99999852 334322 0 0
Q ss_pred HhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeE---ec---CcE--E--EcCCc--eeee
Q 014821 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSF---CE---DGI--V--VDGQT--TPLK 364 (418)
Q Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~---~~---~~v--~--~~~g~--~~~~ 364 (418)
+.+.+.+.+++.+|+++.+. +..+ .. +.+ . ..+|. ..++
T Consensus 252 ----------------------------~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~ 303 (519)
T 3qfa_A 252 ----------------------------MANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGE 303 (519)
T ss_dssp ----------------------------HHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEE
T ss_pred ----------------------------HHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEE
Confidence 00112234455667777763 3333 32 222 2 23553 2278
Q ss_pred ccEEEEccCCCCCcchhccccchhhhhhhcCC--CCCCccceeeeeeccCcccc
Q 014821 365 TDLVILATGFKGDVKLKNIFLSQTFQDYLAGS--PTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 365 ~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|.||+|+|++|+...+. +....+.. .++.+.++..+.++.||||.
T Consensus 304 ~D~vi~a~G~~p~~~~l~------l~~~gl~~~~~~G~I~Vd~~~~Ts~~~IyA 351 (519)
T 3qfa_A 304 YNTVMLAIGRDACTRKIG------LETVGVKINEKTGKIPVTDEEQTNVPYIYA 351 (519)
T ss_dssp ESEEEECSCEEESCSSSC------STTTTCCCCTTTCCBCCCTTSBCSSTTEEE
T ss_pred CCEEEEecCCcccCCCCC------hhhcCcEEcCCCCeEeeCCCCccCCCCEEE
Confidence 999999999999854321 22222222 35778888888889999995
No 75
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=99.90 E-value=1.1e-23 Score=211.67 Aligned_cols=281 Identities=14% Similarity=0.096 Sum_probs=168.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC------CCccccc--cCCcceecCCccccc-----cCCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD------IGGAWIK--TVETTMLQTPKQLYQ-----FSDYPWPDS 68 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~------~gg~~~~--~~~~~~l~~~~~~~~-----~~~~~~~~~ 68 (418)
+++||+|||||++|+++|..|++.|++|+|||++.. +||.|.. +.|...+......+. +..+.+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~- 80 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIST- 80 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEEC-
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCccc-
Confidence 578999999999999999999999999999999863 5665544 222222111111100 11111111
Q ss_pred CCCCCCChhHHHHHH-----------HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 69 VTTDFPDHNQVLDYI-----------QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 69 ~~~~~~~~~~~~~~l-----------~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.....+...+..+. ....++.++ .+.. ..+..++ ...+.|.
T Consensus 81 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~-g~~~~~~------------------------~~~~~v~ 132 (476)
T 3lad_A 81 -GEVAIDVPTMIARKDQIVRNLTGGVASLIKANGV--TLFE-GHGKLLA------------------------GKKVEVT 132 (476)
T ss_dssp -SCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEE-SEEEECS------------------------TTCEEEE
T ss_pred -CCCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEE-eEEEEec------------------------CCEEEEE
Confidence 01111222222222 233334455 3444 2333322 1335554
Q ss_pred EecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
..+ +...++.||+||+|||+. |..|+.. +.+ ...++++..+... ...+++|+|||+|.+|+|
T Consensus 133 ~~~---g~~~~~~~d~lvlAtG~~---p~~~~~~---~~~--~~~v~~~~~~~~~-------~~~~~~v~ViGgG~~g~e 194 (476)
T 3lad_A 133 AAD---GSSQVLDTENVILASGSK---PVEIPPA---PVD--QDVIVDSTGALDF-------QNVPGKLGVIGAGVIGLE 194 (476)
T ss_dssp CTT---SCEEEECCSCEEECCCEE---ECCCTTS---CCC--SSSEEEHHHHTSC-------SSCCSEEEEECCSHHHHH
T ss_pred cCC---CceEEEEcCEEEEcCCCC---CCCCCCC---CCC--cccEEechhhhcc-------ccCCCeEEEECCCHHHHH
Confidence 332 334689999999999964 5555433 322 1235555444332 245789999999999999
Q ss_pred HHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHH
Q 014821 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (418)
+|..|...+.. |+++.|.+.+ ++... ..
T Consensus 195 ~A~~l~~~g~~---Vtlv~~~~~~-l~~~~-----------~~------------------------------------- 222 (476)
T 3lad_A 195 LGSVWARLGAE---VTVLEAMDKF-LPAVD-----------EQ------------------------------------- 222 (476)
T ss_dssp HHHHHHHTTCE---EEEEESSSSS-STTSC-----------HH-------------------------------------
T ss_pred HHHHHHHcCCc---EEEEecCCCc-CcccC-----------HH-------------------------------------
Confidence 99999988765 9999998753 33222 00
Q ss_pred HhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC--c--EEEcCC---ceeeeccEEE
Q 014821 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED--G--IVVDGQ---TTPLKTDLVI 369 (418)
Q Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~--~--v~~~~g---~~~~~~D~Vi 369 (418)
+.+.+.+.+++.+|+++.+. +..++.+ + +.+.++ ++ +++|.||
T Consensus 223 ----------------------------~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~-~~~D~vi 273 (476)
T 3lad_A 223 ----------------------------VAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKS-QAFDKLI 273 (476)
T ss_dssp ----------------------------HHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEE-EEESEEE
T ss_pred ----------------------------HHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEE-EECCEEE
Confidence 11112345566788888886 7777632 2 566654 45 9999999
Q ss_pred EccCCCCCcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 370 LATGFKGDVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 370 ~atG~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+|||++|+.... .+....+. +.++.+.++..+.++.||||.
T Consensus 274 ~a~G~~p~~~~l------~~~~~g~~~~~~G~i~vd~~~~t~~~~Iya 315 (476)
T 3lad_A 274 VAVGRRPVTTDL------LAADSGVTLDERGFIYVDDYCATSVPGVYA 315 (476)
T ss_dssp ECSCEEECCTTC------CSSCCSCCBCTTSCBCCCTTSBCSSTTEEE
T ss_pred EeeCCcccCCCC------CccccCccccCCCCEeeCCCcccCCCCEEE
Confidence 999999985421 01111121 335678888777889999996
No 76
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=99.89 E-value=9.9e-24 Score=211.22 Aligned_cols=272 Identities=14% Similarity=0.126 Sum_probs=169.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccc----cccCCCCCCCCCCCCCCCh
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQL----YQFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~----~~~~~~~~~~~~~~~~~~~ 76 (418)
++||+|||||++|+++|..|++.|.+|+|||+ ..+||.|.. +.|...+..+... ..+..+.+... ....+.
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk-~~~GG~~~~~gcip~k~l~~~~~~~~~~~~~~~~g~~~~--~~~~~~ 81 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGKKVAIAEE-FRYGGTCVIRGCVPKKLYVYASQFAEHFEDAAGFGWTVG--ESRFDW 81 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEEES-SCTTHHHHHHSHHHHHHHHHHHHHHHHHHHGGGGTEEEC--CCEECH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCCEEEEEeC-CCCCCcccccCchhhHHHHHHHHHHHHHHHHHhcCcccC--CCCcCH
Confidence 48999999999999999999999999999999 789998865 3232221111100 01111111100 001122
Q ss_pred hHHH-----------HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEe-cCCCC
Q 014821 77 NQVL-----------DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVE-DAKNH 144 (418)
Q Consensus 77 ~~~~-----------~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~~ 144 (418)
..+. .++....++.++ .+..+ ++..++ . ..+.+. ++
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~gv--~~~~g-~~~~i~--~------------------------~~v~~~~~~--- 129 (463)
T 4dna_A 82 AKLVAAKEQEIARLEGLYRKGLANAGA--EILDT-RAELAG--P------------------------NTVKLLASG--- 129 (463)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTC--EEEES-CEEESS--S------------------------SEEEETTTT---
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCC--EEEEE-EEEEee--C------------------------CEEEEecCC---
Confidence 2222 233333444455 34432 333322 1 345552 22
Q ss_pred ceeEEEeCEEEEeeccCCCCCC-CCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHh
Q 014821 145 STEVHQVDFVILCVGRFSDVPN-IPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECT 223 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~~~p~-~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~ 223 (418)
..+.+|+||+|||+ .|. .|+++ |.+. ++++..+.. ....+++++|||+|.+|+|+|..+.
T Consensus 130 --~~~~~d~lviAtG~---~p~~~p~i~---G~~~----~~~~~~~~~-------~~~~~~~v~ViGgG~~g~e~A~~l~ 190 (463)
T 4dna_A 130 --KTVTAERIVIAVGG---HPSPHDALP---GHEL----CITSNEAFD-------LPALPESILIAGGGYIAVEFANIFH 190 (463)
T ss_dssp --EEEEEEEEEECCCE---EECCCTTST---TGGG----CBCHHHHTT-------CSSCCSEEEEECCSHHHHHHHHHHH
T ss_pred --eEEEeCEEEEecCC---CcccCCCCC---Cccc----cccHHHHhh-------hhcCCCeEEEECCCHHHHHHHHHHH
Confidence 58999999999995 466 77777 6542 233222222 1234789999999999999999999
Q ss_pred hhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 224 TANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 224 ~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
..+.. |+++.+.+..+ +... ..
T Consensus 191 ~~g~~---Vt~v~~~~~~l-~~~~-----------~~------------------------------------------- 212 (463)
T 4dna_A 191 GLGVK---TTLIYRGKEIL-SRFD-----------QD------------------------------------------- 212 (463)
T ss_dssp HTTCE---EEEECSSSSSS-TTSC-----------HH-------------------------------------------
T ss_pred HcCCe---EEEEEcCCccc-cccC-----------HH-------------------------------------------
Confidence 88765 99999987533 3222 00
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecC-----cEE-EcCCceeeeccEEEEccCCCC
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCED-----GIV-VDGQTTPLKTDLVILATGFKG 376 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~-----~v~-~~~g~~~~~~D~Vi~atG~~~ 376 (418)
+.+.+.+.+++.+|+++.+. +..+..+ .|. +++|+ +++|.||+|+|++|
T Consensus 213 ----------------------~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~--i~aD~Vv~a~G~~p 268 (463)
T 4dna_A 213 ----------------------MRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE--IVADQVMLALGRMP 268 (463)
T ss_dssp ----------------------HHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE--EEESEEEECSCEEE
T ss_pred ----------------------HHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe--EEeCEEEEeeCccc
Confidence 01112345566778888875 7777643 356 66775 99999999999999
Q ss_pred CcchhccccchhhhhhhcC-CCCCCccceeeeeeccCcccc
Q 014821 377 DVKLKNIFLSQTFQDYLAG-SPTEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 377 ~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 416 (418)
+..++. +....+. +.++.+.++..+.++.||||.
T Consensus 269 ~~~~l~------l~~~g~~~~~~G~i~vd~~~~t~~~~iya 303 (463)
T 4dna_A 269 NTNGLG------LEAAGVRTNELGAIIVDAFSRTSTPGIYA 303 (463)
T ss_dssp SCTTSS------TGGGTCCBCTTSCBCCCTTCBCSSTTEEE
T ss_pred CCCCCC------ccccCceECCCCCEeECcCCCCCCCCEEE
Confidence 854311 1222222 346778888777889999996
No 77
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=99.88 E-value=5.9e-23 Score=211.99 Aligned_cols=188 Identities=21% Similarity=0.274 Sum_probs=114.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC-C-------CCCccccc--cCCcceecCCccc----cccCCCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR-S-------DIGGAWIK--TVETTMLQTPKQL----YQFSDYPWPD 67 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~-~-------~~gg~~~~--~~~~~~l~~~~~~----~~~~~~~~~~ 67 (418)
..+||+|||||++|+++|..|++.|.+++|||+. + .+||.|.. +.|...+...... ..+..+.+..
T Consensus 106 ~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~~~~~~g~~~~~GG~~~~~g~iP~~~l~~~~~~~~~~~~~~~~g~~~ 185 (598)
T 2x8g_A 106 YDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYVEPTPIGTTWGLGGTCVNVGCIPKKLMHQAGLLSHALEDAEHFGWSL 185 (598)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCCCCTTCCCCCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccccEEEECCCccHHHHHHHHHhCCCeEEEEeccCCcccccccccCceEeccCCCchHHHHHHHHHHHHHhhHHhCCccc
Confidence 3589999999999999999999999999999973 2 36776654 2333222111100 0011111110
Q ss_pred CCCCCCCChhHHHHHHHHHHHhc-----------CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEE
Q 014821 68 SVTTDFPDHNQVLDYIQSYASHF-----------DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTV 136 (418)
Q Consensus 68 ~~~~~~~~~~~~~~~l~~~~~~~-----------~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 136 (418)
.......+..++.++++.+++++ ++ .+. ...+..++. +.+
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V--~~~-~~~~~~~~~--------------------------~~v 236 (598)
T 2x8g_A 186 DRSKISHNWSTMVEGVQSHIGSLNWGYKVALRDNQV--TYL-NAKGRLISP--------------------------HEV 236 (598)
T ss_dssp CGGGCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EEE-CSEEEEEET--------------------------TEE
T ss_pred cCCcCccCHHHHHHHHHHHHHHHHHHHHHHHhhCCc--EEE-EEEEEEcCC--------------------------CEE
Confidence 00011234456666666554432 22 121 223333321 335
Q ss_pred EEecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHH
Q 014821 137 AVEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSAL 216 (418)
Q Consensus 137 ~~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~ 216 (418)
.+... +|...++.||+||+|||+ .|..|+++ |.+.+ .+++..+.. ....+++|+|||+|.+|+
T Consensus 237 ~v~~~-~g~~~~~~~d~lviAtGs---~p~~p~i~---G~~~~---~~~~~~~~~-------~~~~~~~vvViGgG~~g~ 299 (598)
T 2x8g_A 237 QITDK-NQKVSTITGNKIILATGE---RPKYPEIP---GAVEY---GITSDDLFS-------LPYFPGKTLVIGASYVAL 299 (598)
T ss_dssp EEECT-TCCEEEEEEEEEEECCCE---EECCCSST---THHHH---CEEHHHHTT-------CSSCCCSEEEECCSHHHH
T ss_pred EEEeC-CCCeEEEEeCEEEEeCCC---CCCCCCCC---Ccccc---eEcHHHHhh-------CccCCCEEEEECCCHHHH
Confidence 44432 233457999999999995 57788777 75432 333332222 123467899999999999
Q ss_pred HHHHHHhhhcCCCCCeEEEEec
Q 014821 217 DIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 217 e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
|+|..|...+.. |+++.|+
T Consensus 300 E~A~~l~~~g~~---Vtlv~~~ 318 (598)
T 2x8g_A 300 ECAGFLASLGGD---VTVMVRS 318 (598)
T ss_dssp HHHHHHHHTTCC---EEEEESS
T ss_pred HHHHHHHHcCCE---EEEEECC
Confidence 999999998765 9999987
No 78
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=99.88 E-value=2.2e-23 Score=210.12 Aligned_cols=273 Identities=15% Similarity=0.158 Sum_probs=165.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
++++|||||||++|+.+|..|++.+++|+|||+++.. .| .|. +++. .....+...+..
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~~~------~~------~Pl-L~~v---------a~G~l~~~~i~~ 98 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRSYF------LF------TPL-LPSA---------PVGTVDEKSIIE 98 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSSEE------EC------GGG-GGGT---------TTTSSCGGGGEE
T ss_pred CCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCCCc------cc------ccc-hhHH---------hhccccHHHhhh
Confidence 3578999999999999999999999999999997521 11 010 0000 001111112211
Q ss_pred HHHHHHHh--cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecC---------------CCC
Q 014821 82 YIQSYASH--FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA---------------KNH 144 (418)
Q Consensus 82 ~l~~~~~~--~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---------------~~~ 144 (418)
-++..... .+. .+...+|++|+.+. .+|++.+. ..+
T Consensus 99 p~~~~~~~~~~~v---~~~~~~v~~ID~~~------------------------k~V~l~~~~~~~~~~~~~~~~~~~~~ 151 (502)
T 4g6h_A 99 PIVNFALKKKGNV---TYYEAEATSINPDR------------------------NTVTIKSLSAVSQLYQPENHLGLHQA 151 (502)
T ss_dssp EHHHHHTTCSSCE---EEEEEEEEEEEGGG------------------------TEEEEEEEEEEEECSSSCCCCCCCTT
T ss_pred hHHHHHHhhcCCe---EEEEEEEEEEEhhh------------------------CEEEEeecccceeecccccccccccC
Confidence 12222222 122 23457899998766 23433221 113
Q ss_pred ceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhh-------------------hhhhcCCCE
Q 014821 145 STEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-------------------AANLVKGKR 205 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~ 205 (418)
...++.||+||||||+ .|+.+++| |.+++ .+. +....+.. .+......+
T Consensus 152 ~~~~i~YD~LViAtGs---~~~~~~ip---G~~e~---a~~---l~t~~dA~~ir~~l~~~~e~a~~~~~~~~~~~~~~~ 219 (502)
T 4g6h_A 152 EPAEIKYDYLISAVGA---EPNTFGIP---GVTDY---GHF---LKEIPNSLEIRRTFAANLEKANLLPKGDPERRRLLS 219 (502)
T ss_dssp CCEEEECSEEEECCCC---EECCTTCT---THHHH---CEE---CSSHHHHHHHHHHHHHHHHHHHHSCTTCHHHHHHTE
T ss_pred CceEEeCCEEEEcCCc---ccccCCcc---Ccccc---cCC---CCCHHHHHHHHHHHHHHHHHHhcccccchhhccccc
Confidence 3468999999999995 46777776 75432 111 11111100 011122458
Q ss_pred EEEEcCCCCHHHHHHHHhhhcCC-----------CCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhH
Q 014821 206 VTVVGLQKSALDIAMECTTANGL-----------ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFL 274 (418)
Q Consensus 206 v~VvG~G~sa~e~a~~l~~~~~~-----------~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 274 (418)
++|||+|.+|+|+|.+|...+.. ..+|+++.+.++ ++|.+. ..+
T Consensus 220 vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~-il~~~~-----------~~~------------- 274 (502)
T 4g6h_A 220 IVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPI-VLNMFE-----------KKL------------- 274 (502)
T ss_dssp EEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSS-SSTTSC-----------HHH-------------
T ss_pred eEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccc-cccCCC-----------HHH-------------
Confidence 99999999999999999764311 135899998875 445433 111
Q ss_pred HHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCc
Q 014821 275 LSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDG 353 (418)
Q Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~ 353 (418)
++...+.+++.+|+++.+. +..+++++
T Consensus 275 ----------------------------------------------------~~~~~~~L~~~GV~v~~~~~v~~v~~~~ 302 (502)
T 4g6h_A 275 ----------------------------------------------------SSYAQSHLENTSIKVHLRTAVAKVEEKQ 302 (502)
T ss_dssp ----------------------------------------------------HHHHHHHHHHTTCEEETTEEEEEECSSE
T ss_pred ----------------------------------------------------HHHHHHHHHhcceeeecCceEEEEeCCc
Confidence 1112345667789999987 88898887
Q ss_pred EEE----cCCc---eeeeccEEEEccCCCCCcchhccccchhhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 354 IVV----DGQT---TPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 354 v~~----~~g~---~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
+.+ +||+ +.+++|.||||+|.++++...+. .. ......+..+++.++..+ +++.||||.
T Consensus 303 ~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~~~~~~~l-~~---~~~~~~~~~g~I~Vd~~lq~~~~~~IfA 369 (502)
T 4g6h_A 303 LLAKTKHEDGKITEETIPYGTLIWATGNKARPVITDL-FK---KIPEQNSSKRGLAVNDFLQVKGSNNIFA 369 (502)
T ss_dssp EEEEEECTTSCEEEEEEECSEEEECCCEECCHHHHHH-HH---HSGGGTTCCSSEEBCTTSBBTTCSSEEE
T ss_pred eEEEEEecCcccceeeeccCEEEEccCCcCCHHHHhH-HH---hccccccCCCceeECCccccCCCCCEEE
Confidence 654 3553 23899999999999998422221 10 001122456789999888 889999995
No 79
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=99.88 E-value=6.2e-23 Score=204.24 Aligned_cols=171 Identities=19% Similarity=0.300 Sum_probs=116.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.+..|.. ....++.++
T Consensus 122 ~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~~GG~l~~gip~~------------------------~~~~~~~~~ 177 (456)
T 2vdc_G 122 GLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDRMGGLLVYGIPGF------------------------KLEKSVVER 177 (456)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSCSTHHHHTSCTT------------------------TSCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCCCCCeeeecCCCc------------------------cCCHHHHHH
Confidence 47999999999999999999999999999999999999876533321 111456677
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
..+.++++++ ++++++.|. . .+++.+. .+.||+||+|||+.
T Consensus 178 ~~~~l~~~gv--~~~~~~~v~-----~-------------------------~v~~~~~------~~~~d~vvlAtG~~- 218 (456)
T 2vdc_G 178 RVKLLADAGV--IYHPNFEVG-----R-------------------------DASLPEL------RRKHVAVLVATGVY- 218 (456)
T ss_dssp HHHHHHHTTC--EEETTCCBT-----T-------------------------TBCHHHH------HSSCSEEEECCCCC-
T ss_pred HHHHHHHCCc--EEEeCCEec-----c-------------------------EEEhhHh------HhhCCEEEEecCCC-
Confidence 7777788888 677765531 1 1222222 25699999999974
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhh----h--h-----hhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCC
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYE----A--A-----ANLVKGKRVTVVGLQKSALDIAMECTTANGLENP 231 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~----~--~-----~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~ 231 (418)
.|..+.++ |.+. . .+++..++...... . . .....+++|+|||+|.+|+|+|..+...+. ++
T Consensus 219 -~~~~~~ip---G~~~-~-gv~~a~~~l~~~~~~~~~~~~~~~~~g~~~~~gk~VvVIGgG~~a~d~A~~~~r~Ga--~~ 290 (456)
T 2vdc_G 219 -KARDIKAP---GSGL-G-NIVAALDYLTTSNKVSLGDTVEAYENGSLNAAGKHVVVLGGGDTAMDCVRTAIRQGA--TS 290 (456)
T ss_dssp -EECCTTCS---CCTT-T-TEEEHHHHHHHHHHHHCTTTCSSCCTTCSCCCCSEEEEECSSHHHHHHHHHHHHTTC--SE
T ss_pred -CCCCCCCC---CCcC-C-CcEEHHHHHHHhhhhhcccccccccccccccCCCEEEEECCChhHHHHHHHHHHcCC--CE
Confidence 36666676 6541 1 24433222110000 0 0 012468999999999999999999888765 35
Q ss_pred eEEEEecCccccc
Q 014821 232 CTVLYRTEHWNIP 244 (418)
Q Consensus 232 V~~~~r~~~~~~~ 244 (418)
|++++|++...+|
T Consensus 291 Vtiv~r~~~~~~p 303 (456)
T 2vdc_G 291 VKCLYRRDRKNMP 303 (456)
T ss_dssp EEEECSSCSTTCS
T ss_pred EEEEEeCCccCCC
Confidence 9999998864333
No 80
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=99.87 E-value=3.9e-23 Score=205.34 Aligned_cols=273 Identities=14% Similarity=0.167 Sum_probs=171.8
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHh---CCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCCh
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDH 76 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~---~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (418)
|. ++||||||||++|+++|..|++ .+.+|+|||+++... +. |... .+ .......
T Consensus 1 M~~m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~------~~------~~~~-~~---------~~g~~~~ 58 (437)
T 3sx6_A 1 MRGSAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQ------FV------PSNP-WV---------GVGWKER 58 (437)
T ss_dssp CTTSCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEE------CG------GGHH-HH---------HHTSSCH
T ss_pred CCCCCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCc------cc------CCcc-cc---------ccCccCH
Confidence 54 5799999999999999999999 799999999976321 00 0000 00 0111233
Q ss_pred hHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEE
Q 014821 77 NQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVIL 156 (418)
Q Consensus 77 ~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIl 156 (418)
.++...+...+++.++ .+. .++|+.++... ..|.+.++ .++.||+||+
T Consensus 59 ~~~~~~l~~~~~~~gv--~~~-~~~v~~id~~~------------------------~~V~~~~g-----~~i~~d~lvi 106 (437)
T 3sx6_A 59 DDIAFPIRHYVERKGI--HFI-AQSAEQIDAEA------------------------QNITLADG-----NTVHYDYLMI 106 (437)
T ss_dssp HHHEEECHHHHHTTTC--EEE-CSCEEEEETTT------------------------TEEEETTS-----CEEECSEEEE
T ss_pred HHHHHHHHHHHHHCCC--EEE-EeEEEEEEcCC------------------------CEEEECCC-----CEEECCEEEE
Confidence 4555556677777787 555 57899998655 35777665 5799999999
Q ss_pred eeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhh--hhhhcCCCEEEEEcCCCCH------HHHHHHHh----h
Q 014821 157 CVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA--AANLVKGKRVTVVGLQKSA------LDIAMECT----T 224 (418)
Q Consensus 157 AtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~v~VvG~G~sa------~e~a~~l~----~ 224 (418)
|||+ .|..|.++ |.+...+...+...+....... .....++++++|||+|.+| +|+|..+. .
T Consensus 107 AtG~---~~~~~~ip---G~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~ 180 (437)
T 3sx6_A 107 ATGP---KLAFENVP---GSDPHEGPVQSICTVDHAERAFAEYQALLREPGPIVIGAMAGASCFGPAYEYAMIVASDLKK 180 (437)
T ss_dssp CCCC---EECGGGST---TCSTTTSSEECCSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHH
T ss_pred CCCC---CcCcccCC---CCCcccCcceecccccHHHHHHHHHHHHHhCCCEEEEEcCCCCCcCcHHHHHHHHHHHHHHH
Confidence 9995 46677777 7664433333322222110000 0011224567899997654 88886554 3
Q ss_pred hcCC-CCC-eEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhh
Q 014821 225 ANGL-ENP-CTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHR 302 (418)
Q Consensus 225 ~~~~-~~~-V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (418)
.+.. ..+ |+++++.+. +.+... .+.+
T Consensus 181 ~g~~~~~~~Vtlv~~~~~-~~~~~l-~~~~-------------------------------------------------- 208 (437)
T 3sx6_A 181 RGMRDKIPSFTFITSEPY-IGHLGI-QGVG-------------------------------------------------- 208 (437)
T ss_dssp TTCGGGCSCEEEEESSSS-TTCTTT-TCCT--------------------------------------------------
T ss_pred cCCcccCcEEEEEcCCcc-cccccc-Ccch--------------------------------------------------
Confidence 3321 013 999998764 211100 0000
Q ss_pred hcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCcEEEcC---------CceeeeccEEEEcc
Q 014821 303 LAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDG---------QTTPLKTDLVILAT 372 (418)
Q Consensus 303 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~---------g~~~~~~D~Vi~at 372 (418)
.....+.+.+++.+|+++.+. +.+++++++.+++ +++ +++|.|++|+
T Consensus 209 ----------------------~~~~~~~~~l~~~gI~~~~~~~v~~v~~~~v~~~~~~~~g~~~~~~~-i~~D~vv~~~ 265 (437)
T 3sx6_A 209 ----------------------DSKGILTKGLKEEGIEAYTNCKVTKVEDNKMYVTQVDEKGETIKEMV-LPVKFGMMIP 265 (437)
T ss_dssp ----------------------THHHHHHHHHHHTTCEEECSEEEEEEETTEEEEEEECTTSCEEEEEE-EECSEEEEEC
T ss_pred ----------------------HHHHHHHHHHHHCCCEEEcCCEEEEEECCeEEEEecccCCccccceE-EEEeEEEEcC
Confidence 011122345667789999886 8889888877764 556 9999999999
Q ss_pred CCCCCcchhccccchhhhhhhcCCCCCCccceeee-eeccCcccc
Q 014821 373 GFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 373 G~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 416 (418)
|+.++..+.+. ..+.+.++.+.++..+ .++.||||.
T Consensus 266 g~~~~~~~~~~--------~gl~~~~G~i~Vd~~l~t~~~~~Ifa 302 (437)
T 3sx6_A 266 AFKGVPAVAGV--------EGLCNPGGFVLVDEHQRSKKYANIFA 302 (437)
T ss_dssp CEECCHHHHTS--------TTTBCTTSCBCBCTTSBBSSCTTEEE
T ss_pred CCcCchhhhcc--------ccccCCCCcEEeChhccCCCCCCEEE
Confidence 99988433321 2223667889999888 669999995
No 81
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=99.87 E-value=2.1e-22 Score=200.69 Aligned_cols=171 Identities=25% Similarity=0.279 Sum_probs=115.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHh-C------CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLL-K------GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDF 73 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~-~------~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 73 (418)
|..+||+|||||++|+.+|..|++ . +.+|+|||+.+.+||.|++.. .+.+
T Consensus 1 m~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~gg~~~~gv-----------------------~p~~ 57 (456)
T 1lqt_A 1 MRPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTPWGLVRSGV-----------------------APDH 57 (456)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSCSTHHHHTS-----------------------CTTC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCCCCcccccc-----------------------CCCC
Confidence 788999999999999999999999 7 899999999988888876421 1122
Q ss_pred CChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCE
Q 014821 74 PDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDF 153 (418)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~ 153 (418)
+...++..++...++++++ .++.+..+ . . .|++.++ .+.||+
T Consensus 58 ~~~~~~~~~~~~~~~~~~v--~~~~~v~v------~----------------------~--~v~~~~~------~~~~d~ 99 (456)
T 1lqt_A 58 PKIKSISKQFEKTAEDPRF--RFFGNVVV------G----------------------E--HVQPGEL------SERYDA 99 (456)
T ss_dssp TGGGGGHHHHHHHHTSTTE--EEEESCCB------T----------------------T--TBCHHHH------HHHSSE
T ss_pred CCHHHHHHHHHHHHhcCCC--EEEeeEEE------C----------------------C--EEEECCC------eEeCCE
Confidence 3345677788887777776 55544321 1 0 1333332 478999
Q ss_pred EEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCC----Cchhh-hhhhhcCCCEEEEEcCCCCHHHHHHHHhhhc--
Q 014821 154 VILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYS----DMDYE-AAANLVKGKRVTVVGLQKSALDIAMECTTAN-- 226 (418)
Q Consensus 154 vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~----~~~~~-~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~-- 226 (418)
||+|||+. .|..|+++ |.+ +.+ ++++..+. ...+. .......+++|+|||+|.+|+|+|..|...+
T Consensus 100 lViAtG~~--~~~~~~ip---G~~-~~g-v~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIG~G~~g~e~A~~L~~~~~~ 172 (456)
T 1lqt_A 100 VIYAVGAQ--SDRMLNIP---GED-LPG-SIAAVDFVGWYNAHPHFEQVSPDLSGARAVVIGNGNVALDVARILLTDPDV 172 (456)
T ss_dssp EEECCCCC--EECCCCCT---TTT-STT-EEEHHHHHHHHTTCGGGTTCCCCCCSSEEEEECCSHHHHHHHHHHHSCHHH
T ss_pred EEEeeCCC--CCCCCCCC---CCC-CCC-cEEHHHHHhhhhcCcccccchhhcCCCEEEEECCCHHHHHHHHHHHhhhhh
Confidence 99999964 25666677 654 333 55544331 00000 0011236899999999999999999998741
Q ss_pred -----------------CCCCCeEEEEecCc
Q 014821 227 -----------------GLENPCTVLYRTEH 240 (418)
Q Consensus 227 -----------------~~~~~V~~~~r~~~ 240 (418)
+. ++|+++.|++.
T Consensus 173 l~~tdi~~~~~~~l~~~g~-~~V~lv~r~~~ 202 (456)
T 1lqt_A 173 LARTDIADHALESLRPRGI-QEVVIVGRRGP 202 (456)
T ss_dssp HTTSCCCHHHHHHHTTCCC-CEEEEECSSCG
T ss_pred hcCCCccHHHHHHHHHCCC-cEEEEEecCCh
Confidence 11 36999999885
No 82
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=99.86 E-value=2e-22 Score=203.93 Aligned_cols=280 Identities=17% Similarity=0.189 Sum_probs=164.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC--------CCCccccc--cCCcceecCCcccccc-----CCCCCCCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS--------DIGGAWIK--TVETTMLQTPKQLYQF-----SDYPWPDS 68 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~--------~~gg~~~~--~~~~~~l~~~~~~~~~-----~~~~~~~~ 68 (418)
|||+|||||++|+.+|..+++.|.+|+|||+.. .+||++.+ +.|+..+...+..++. ..+.+..
T Consensus 43 YDviVIG~GpaG~~aA~~aa~~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~~- 121 (542)
T 4b1b_A 43 YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKF- 121 (542)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEEE-
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCccc-
Confidence 799999999999999999999999999999643 47887665 4454333222211110 0011100
Q ss_pred CCCCCCChhHHHHHHHHHH-----------HhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 69 VTTDFPDHNQVLDYIQSYA-----------SHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 69 ~~~~~~~~~~~~~~l~~~~-----------~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.....+...+..+.+... +..++ .+ +.....-+..+. ..|.
T Consensus 122 -~~~~~d~~~~~~~~~~~v~~l~~~~~~~l~~~~V--~~-i~G~a~f~~~~~------------------------v~V~ 173 (542)
T 4b1b_A 122 -DNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKV--KY-INGLAKLKDKNT------------------------VSYY 173 (542)
T ss_dssp -EEEEECHHHHHHHHHHHHHHHHHHHHHHHHHTTC--EE-ECEEEEEEETTE------------------------EEEE
T ss_pred -CcccccHHHHHHHHHHHHHHHHHHHHHHHHhCCC--EE-EeeeEEEcCCCc------------------------ceEe
Confidence 000112233333333322 22343 22 223333333222 3333
Q ss_pred EecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
... ..+..+++.+|++|||||+ .|.+|+.. +... ..++.+.+...+ ...+++++|||+|++|+|
T Consensus 174 ~~~-~~~~~~~i~a~~iiIATGs---~P~~P~~~---~~~~--~~~~ts~~~l~l-------~~lP~~lvIIGgG~IGlE 237 (542)
T 4b1b_A 174 LKG-DLSKEETVTGKYILIATGC---RPHIPDDV---EGAK--ELSITSDDIFSL-------KKDPGKTLVVGASYVALE 237 (542)
T ss_dssp EC---CCCEEEEEEEEEEECCCE---EECCCSSS---BTHH--HHCBCHHHHTTC-------SSCCCSEEEECCSHHHHH
T ss_pred ecc-cCCceEEEeeeeEEeccCC---CCCCCCcc---cCCC--ccccCchhhhcc-------ccCCceEEEECCCHHHHH
Confidence 322 1244578999999999994 57777543 2211 123333333332 245789999999999999
Q ss_pred HHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHH
Q 014821 218 IAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADI 297 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (418)
+|..+...|.. ||++.|+. ++|... . .
T Consensus 238 ~A~~~~~lG~~---VTii~~~~--~L~~~D-------~----e------------------------------------- 264 (542)
T 4b1b_A 238 CSGFLNSLGYD---VTVAVRSI--VLRGFD-------Q----Q------------------------------------- 264 (542)
T ss_dssp HHHHHHHHTCC---EEEEESSC--SSTTSC-------H----H-------------------------------------
T ss_pred HHHHHHhcCCe---EEEecccc--cccccc-------h----h-------------------------------------
Confidence 99999999876 99998754 445433 0 0
Q ss_pred HhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--Cc--EEEcCCceeeeccEEEEcc
Q 014821 298 KKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--DG--IVVDGQTTPLKTDLVILAT 372 (418)
Q Consensus 298 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~~--v~~~~g~~~~~~D~Vi~at 372 (418)
+...+.+.+++.+++++.+. +..++. +. |.+.++++ +.+|.|++|+
T Consensus 265 ----------------------------i~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~-~~~D~vLvAv 315 (542)
T 4b1b_A 265 ----------------------------CAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTS-ELYDTVLYAI 315 (542)
T ss_dssp ----------------------------HHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCE-EEESEEEECS
T ss_pred ----------------------------HHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCe-EEEEEEEEcc
Confidence 01112234556677887776 555543 22 56778888 8999999999
Q ss_pred CCCCCcchhccccchhhhhhhcC-CCCCC-ccceeeeeeccCcccc
Q 014821 373 GFKGDVKLKNIFLSQTFQDYLAG-SPTEK-LPLYRSAHIYIDTLTY 416 (418)
Q Consensus 373 G~~~~~~~~~~l~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~ 416 (418)
|.+|+.+.+. +....+. +..+. +.++..+.++.|+||.
T Consensus 316 GR~Pnt~~L~------le~~gv~~~~~~~~i~vd~~~~Ts~p~IyA 355 (542)
T 4b1b_A 316 GRKGDIDGLN------LESLNMNVNKSNNKIIADHLSCTNIPSIFA 355 (542)
T ss_dssp CEEESCGGGC------GGGTTCCEETTTTEECCCTTSBCSSTTEEE
T ss_pred cccCCccccC------cccceeeecccCceEeccccccccCCCeEE
Confidence 9999954222 1111221 12233 4566666899999985
No 83
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=99.86 E-value=2.2e-22 Score=202.76 Aligned_cols=283 Identities=10% Similarity=0.085 Sum_probs=164.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCc-----cccccCCCCCCCC-----
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPK-----QLYQFSDYPWPDS----- 68 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~-----~~~~~~~~~~~~~----- 68 (418)
|..+||||||||++|+++|..|++. +.+|+|||+.+.++. .....+..+.... ..+.|..++....
T Consensus 9 ~~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~~y--~r~~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 86 (493)
T 1m6i_A 9 PSHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPELPY--MRPPLSKELWFSDDPNVTKTLRFKQWNGKERSIYFQ 86 (493)
T ss_dssp CSEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSCCB--CSGGGGTGGGCC--CTHHHHCEEECTTSCEEESBSS
T ss_pred CCcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCCCC--CCCCCCHHhhcCCccchhhccccccccccccccccc
Confidence 3568999999999999999999886 789999999875541 1110010010000 0011111110000
Q ss_pred CCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeE
Q 014821 69 VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEV 148 (418)
Q Consensus 69 ~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 148 (418)
....+.....+.+ ..++++ .++.+++|..++... ++|.+.++ .+
T Consensus 87 ~~~~~~~~~~l~~-----~~~~gv--~~~~g~~v~~id~~~------------------------~~V~~~~g-----~~ 130 (493)
T 1m6i_A 87 PPSFYVSAQDLPH-----IENGGV--AVLTGKKVVQLDVRD------------------------NMVKLNDG-----SQ 130 (493)
T ss_dssp CGGGSBCTTTTTT-----STTCEE--EEEETCCEEEEEGGG------------------------TEEEETTS-----CE
T ss_pred chHhhcchhhhhh-----hhcCCe--EEEcCCEEEEEECCC------------------------CEEEECCC-----CE
Confidence 0001111111100 123455 677788999998765 56777665 57
Q ss_pred EEeCEEEEeeccCCCCCCCCCCCCCCCCC--CCCceEEeccCCCCchhh--hhhhhcCCCEEEEEcCCCCHHHHHHHHhh
Q 014821 149 HQVDFVILCVGRFSDVPNIPEFPPKKGPE--AFHGKVIHSMDYSDMDYE--AAANLVKGKRVTVVGLQKSALDIAMECTT 224 (418)
Q Consensus 149 i~~d~vIlAtG~~~~~p~~p~~~~~~g~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~VvG~G~sa~e~a~~l~~ 224 (418)
+.||+||+|||+. |..|+++ +.. .+...+.. +....+. .......+++|+|||+|.+|+|+|..|..
T Consensus 131 i~yd~lviATGs~---p~~~~~~---~~~~~~~~~~v~~---~~~~~d~~~l~~~~~~~~~vvViGgG~iG~E~A~~l~~ 201 (493)
T 1m6i_A 131 ITYEKCLIATGGT---PRSLSAI---DRAGAEVKSRTTL---FRKIGDFRSLEKISREVKSITIIGGGFLGSELACALGR 201 (493)
T ss_dssp EEEEEEEECCCEE---ECCCHHH---HTSCHHHHHTEEE---CCSHHHHHHHHHHHHHCSEEEEECCSHHHHHHHHHHHH
T ss_pred EECCEEEECCCCC---CCCCCCc---ccccccccCceEE---EcCHHHHHHHHHHhhcCCeEEEECCCHHHHHHHHHHHh
Confidence 9999999999954 6665544 321 11112222 1111111 11223458999999999999999999987
Q ss_pred hcCC-CCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhh
Q 014821 225 ANGL-ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRL 303 (418)
Q Consensus 225 ~~~~-~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (418)
.+.. ..+|+++.+.+.++..... ..
T Consensus 202 ~~~~~g~~V~~v~~~~~~~~~~l~-----------~~------------------------------------------- 227 (493)
T 1m6i_A 202 KARALGTEVIQLFPEKGNMGKILP-----------EY------------------------------------------- 227 (493)
T ss_dssp HHHHHTCEEEEECSSSSTTTTTSC-----------HH-------------------------------------------
T ss_pred hhhhcCCEEEEEecCcccccccCC-----------HH-------------------------------------------
Confidence 4210 1248988876532211100 00
Q ss_pred cccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec--C--cEEEcCCceeeeccEEEEccCCCCCc
Q 014821 304 AKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE--D--GIVVDGQTTPLKTDLVILATGFKGDV 378 (418)
Q Consensus 304 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~--~--~v~~~~g~~~~~~D~Vi~atG~~~~~ 378 (418)
+.+.+.+.+++.+|+++.+. +..++. + .|.+++|++ +++|.||+|+|++++.
T Consensus 228 ----------------------~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~-i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 228 ----------------------LSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRK-VETDHIVAAVGLEPNV 284 (493)
T ss_dssp ----------------------HHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCE-EEESEEEECCCEEECC
T ss_pred ----------------------HHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCE-EECCEEEECCCCCccH
Confidence 01112345566788888885 777753 2 367889988 9999999999999996
Q ss_pred chhccccchhhhhhhcCCC--CCCccceeeeeeccCcccc
Q 014821 379 KLKNIFLSQTFQDYLAGSP--TEKLPLYRSAHIYIDTLTY 416 (418)
Q Consensus 379 ~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 416 (418)
.+++. ..+... .+++.++..+.+ .|+||.
T Consensus 285 ~l~~~--------~gl~~~~~~ggi~Vd~~l~t-~~~IyA 315 (493)
T 1m6i_A 285 ELAKT--------GGLEIDSDFGGFRVNAELQA-RSNIWV 315 (493)
T ss_dssp TTHHH--------HTCCBCTTTCSEECCTTCEE-ETTEEE
T ss_pred HHHHH--------cCCccccCCCcEEECCCccc-CCCeeE
Confidence 54432 222222 356777666643 588885
No 84
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=99.85 E-value=4.9e-22 Score=208.12 Aligned_cols=226 Identities=18% Similarity=0.186 Sum_probs=159.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|.. .+++ +.....+.
T Consensus 391 ~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~GG~~~~~~~~p~------------------------~~~~~~~~ 446 (690)
T 3k30_A 391 DARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDLGGRVTQESALPG------------------------LSAWGRVK 446 (690)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCTHHHHHHTSTT------------------------CGGGGHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCEeeeccCCCc------------------------hhHHHHHH
Confidence 579999999999999999999999999999999999988765 2221 12335778
Q ss_pred HHHHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeec
Q 014821 81 DYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 81 ~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
.|+...+.++ ++ .+.+++++ +..+. .++.+|+||+|||
T Consensus 447 ~~~~~~~~~~~gv--~~~~~~~v----------------------------------~~~~~-----~~~~~d~lvlAtG 485 (690)
T 3k30_A 447 EYREAVLAELPNV--EIYRESPM----------------------------------TGDDI-----VEFGFEHVITATG 485 (690)
T ss_dssp HHHHHHHHTCTTE--EEESSCCC----------------------------------CHHHH-----HHTTCCEEEECCC
T ss_pred HHHHHHHHHcCCC--EEEECCee----------------------------------cHHHH-----hhcCCCEEEEcCC
Confidence 8888888876 66 55554332 11111 3577999999999
Q ss_pred cCCCC-----CCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEc--CCCCHHHHHHHHhhhcCCCCCe
Q 014821 160 RFSDV-----PNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVG--LQKSALDIAMECTTANGLENPC 232 (418)
Q Consensus 160 ~~~~~-----p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG--~G~sa~e~a~~l~~~~~~~~~V 232 (418)
+.+.. |..|.++ |.+. ..+++..++.. .....+++|+||| +|.+|+|+|..|...+.. |
T Consensus 486 ~~~~~~~~~~~~~~~i~---G~~~--~~v~~~~~~l~------~~~~~g~~VvViG~ggG~~g~e~A~~L~~~g~~---V 551 (690)
T 3k30_A 486 ATWRTDGVARFHTTALP---IAEG--MQVLGPDDLFA------GRLPDGKKVVVYDDDHYYLGGVVAELLAQKGYE---V 551 (690)
T ss_dssp EEECSSCCSSSCSSCCC---BCTT--SEEECHHHHHT------TCCCSSSEEEEEECSCSSHHHHHHHHHHHTTCE---E
T ss_pred CccccccccccCCCCCC---CCCC--CcEEcHHHHhC------CCCCCCCEEEEEcCCCCccHHHHHHHHHhCCCe---e
Confidence 76211 4566666 6542 34555544332 2345678999999 999999999999998765 9
Q ss_pred EEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhcccCCCCCc
Q 014821 233 TVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKFGMVPKH 312 (418)
Q Consensus 233 ~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (418)
+++.+.+.. .+...
T Consensus 552 tlv~~~~~l-~~~~~----------------------------------------------------------------- 565 (690)
T 3k30_A 552 SIVTPGAQV-SSWTN----------------------------------------------------------------- 565 (690)
T ss_dssp EEEESSSST-TGGGG-----------------------------------------------------------------
T ss_pred EEEeccccc-ccccc-----------------------------------------------------------------
Confidence 999987742 21100
Q ss_pred ccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCcEEEc-----CCceeeeccEEEEccCCCCCcchhccc
Q 014821 313 SFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVD-----GQTTPLKTDLVILATGFKGDVKLKNIF 384 (418)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~-----~g~~~~~~D~Vi~atG~~~~~~~~~~l 384 (418)
.+.....+.+.+++.+|+++.+. +..++.+++.+. ++++ +++|.||+|||++++..+...+
T Consensus 566 ----------~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~~~~~~~~~~-i~aD~VV~A~G~~p~~~l~~~l 632 (690)
T 3k30_A 566 ----------NTFEVNRIQRRLIENGVARVTDHAVVAVGAGGVTVRDTYASIERE-LECDAVVMVTARLPREELYLDL 632 (690)
T ss_dssp ----------GGTCHHHHHHHHHHTTCEEEESEEEEEEETTEEEEEETTTCCEEE-EECSEEEEESCEEECCHHHHHH
T ss_pred ----------cchhHHHHHHHHHHCCCEEEcCcEEEEEECCeEEEEEccCCeEEE-EECCEEEECCCCCCChHHHHHH
Confidence 00011223456677789999886 888888876553 3455 9999999999999997766544
No 85
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=99.84 E-value=2.4e-21 Score=202.37 Aligned_cols=144 Identities=26% Similarity=0.404 Sum_probs=103.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++||+|||||++|+++|..|++.|++|+|||+++.+||.|.. ..++ .....++.
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~gg~~~~~~~~~~------------------------~~~~~~~~ 428 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEIGGQFNIAKQIPG------------------------KEEFYETL 428 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSCTTHHHHTTSTT------------------------CTTHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCeeeccccCCC------------------------HHHHHHHH
Confidence 579999999999999999999999999999999888887654 1111 01123455
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEE-EeCEEEEeec
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVH-QVDFVILCVG 159 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i-~~d~vIlAtG 159 (418)
.++...++++++ .+++++.|.. ..+ .||+||+|||
T Consensus 429 ~~~~~~~~~~gv--~~~~~~~v~~------------------------------------------~~~~~~d~lviAtG 464 (671)
T 1ps9_A 429 RYYRRMIEVTGV--TLKLNHTVTA------------------------------------------DQLQAFDETILASG 464 (671)
T ss_dssp HHHHHHHHHHTC--EEEESCCCCS------------------------------------------SSSCCSSEEEECCC
T ss_pred HHHHHHHHHcCC--EEEeCcEecH------------------------------------------HHhhcCCEEEEccC
Confidence 666677777777 6666543210 013 7999999999
Q ss_pred cCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCC
Q 014821 160 RFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGL 228 (418)
Q Consensus 160 ~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~ 228 (418)
+ .|..|.++ |.+. ..+++..++.. .....+++|+|||+|.+|+|+|..|...+..
T Consensus 465 ~---~p~~~~i~---G~~~--~~v~~~~~~l~------~~~~~~~~VvVIGgG~~g~E~A~~l~~~G~~ 519 (671)
T 1ps9_A 465 I---VPRTPPID---GIDH--PKVLSYLDVLR------DKAPVGNKVAIIGCGGIGFDTAMYLSQPGES 519 (671)
T ss_dssp E---EECCCCCB---TTTS--TTEEEHHHHHT------SCCCCCSEEEEECCHHHHHHHHHHHTCCSSC
T ss_pred C---CcCCCCCC---CCCC--CcEeeHHHHhh------CCCCCCCeEEEECCChhHHHHHHHHHhcCCC
Confidence 5 47777777 6543 23555433221 1234689999999999999999999887653
No 86
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=99.83 E-value=2.3e-21 Score=203.96 Aligned_cols=166 Identities=21% Similarity=0.218 Sum_probs=111.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
.+||+|||||++|+++|..|++.|++|+|||+.+.+||.|.. .+|+ ++....+.
T Consensus 389 ~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~GG~~~~~~~~pg------------------------~~~~~~~~ 444 (729)
T 1o94_A 389 KDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKIGGHLNQVAALPG------------------------LGEWSYHR 444 (729)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTHHHHTTSTT------------------------CGGGHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCeeeecccCCC------------------------hHHHHHHH
Confidence 479999999999999999999999999999999999988766 2221 11123455
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+|++..++.+.. .+..++.+..+ ..+++.+. ..+.||+||+|||+
T Consensus 445 ~~~~~~i~~~~~-----~~~~~v~i~~~-------------------------~~v~~~~~-----~~~~~d~vviAtG~ 489 (729)
T 1o94_A 445 DYRETQITKLLK-----KNKESQLALGQ-------------------------KPMTADDV-----LQYGADKVIIATGA 489 (729)
T ss_dssp HHHHHHHHHHHH-----HSTTCEEECSC-------------------------CCCCHHHH-----HTSCCSEEEECCCE
T ss_pred HHHHHHHHHhhc-----ccCCceEEEeC-------------------------eEEehhhc-----cccCCCEEEEcCCC
Confidence 565555544310 00111222111 11222222 35789999999997
Q ss_pred CCCC-----CCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEc--CCCCHHHHHHHHhhhcCCCCCeE
Q 014821 161 FSDV-----PNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVG--LQKSALDIAMECTTANGLENPCT 233 (418)
Q Consensus 161 ~~~~-----p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG--~G~sa~e~a~~l~~~~~~~~~V~ 233 (418)
.+.. |..|+++ |.+.+...+++..++.. .....+++|+||| +|.+|+|+|..|...+.. |+
T Consensus 490 ~~~~~~~~~p~~~~ip---G~~~~~~~v~~~~~~l~------~~~~~gk~VvVIG~GgG~~g~e~A~~l~~~G~~---Vt 557 (729)
T 1o94_A 490 RWNTDGTNCLTHDPIP---GADASLPDQLTPEQVMD------GKKKIGKRVVILNADTYFMAPSLAEKLATAGHE---VT 557 (729)
T ss_dssp EECSSCCCTTTSSCCT---TCCTTSTTEECHHHHHH------CCSCCCSEEEEEECCCSSHHHHHHHHHHHTTCE---EE
T ss_pred CcccccccCccCCCCC---CccccCCCEEEHHHHhc------CCCCCCCeEEEEcCCCCchHHHHHHHHHHcCCE---EE
Confidence 6221 5667777 77654445665544321 2335678999999 999999999999998765 99
Q ss_pred EEEecC
Q 014821 234 VLYRTE 239 (418)
Q Consensus 234 ~~~r~~ 239 (418)
+++|.+
T Consensus 558 lv~~~~ 563 (729)
T 1o94_A 558 IVSGVH 563 (729)
T ss_dssp EEESSC
T ss_pred EEeccc
Confidence 999876
No 87
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=99.83 E-value=2.6e-20 Score=185.74 Aligned_cols=169 Identities=21% Similarity=0.200 Sum_probs=114.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC--CceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~--~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
.+||+|||||++|+.+|..|++.+ .+|+|||+.+.++|.|+.... +.++...++.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~gg~~~~g~~-----------------------p~~~~~~~~~ 62 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVPFGLVRFGVA-----------------------PDHPEVKNVI 62 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSSCTHHHHTSC-----------------------TTCGGGGGHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcCCceeecccC-----------------------CCCccHHHHH
Confidence 479999999999999999999988 899999999888887755211 1122335677
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.++...++++++ .++.++.+. . .|++.+. .+.||+||+|||+
T Consensus 63 ~~~~~~~~~~gv--~~~~~~~v~-----~-------------------------~V~~~~~------~~~~d~lVlAtGs 104 (460)
T 1cjc_A 63 NTFTQTARSDRC--AFYGNVEVG-----R-------------------------DVTVQEL------QDAYHAVVLSYGA 104 (460)
T ss_dssp HHHHHHHTSTTE--EEEBSCCBT-----T-------------------------TBCHHHH------HHHSSEEEECCCC
T ss_pred HHHHHHHHhCCc--EEEeeeEEe-----e-------------------------EEEeccc------eEEcCEEEEecCc
Confidence 788888887777 666655431 1 1222221 3689999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCc----hhhh-hhhhcCCCEEEEEcCCCCHHHHHHHHhh-----------
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDM----DYEA-AANLVKGKRVTVVGLQKSALDIAMECTT----------- 224 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~v~VvG~G~sa~e~a~~l~~----------- 224 (418)
. .|..|+++ |.+ .. .+++...+..+ .+.. ......+++|+|||+|.+|+|+|..|..
T Consensus 105 ~--~~~~~~ip---G~~-~~-gv~~~~~~~~~~~~~~d~~~~~~~~~~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~ 177 (460)
T 1cjc_A 105 E--DHQALDIP---GEE-LP-GVFSARAFVGWYNGLPENRELAPDLSCDTAVILGQGNVALDVARILLTPPDHLEKTDIT 177 (460)
T ss_dssp C--EECCCCCT---TTT-ST-TEEEHHHHHHHHTTCGGGTTCCCCTTSSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCC
T ss_pred C--CCCCCCCC---CCC-CC-cEEEHHHHHHHhhcCccccccccCCCCCEEEEECCCHHHHHHHHHHhhchhhhcccccc
Confidence 5 13667777 654 22 24554333110 0000 0011257999999999999999999983
Q ss_pred ---------hcCCCCCeEEEEecCcc
Q 014821 225 ---------ANGLENPCTVLYRTEHW 241 (418)
Q Consensus 225 ---------~~~~~~~V~~~~r~~~~ 241 (418)
.+. ++|+++.|++..
T Consensus 178 ~~a~~~l~~~g~--~~V~lv~r~~~~ 201 (460)
T 1cjc_A 178 EAALGALRQSRV--KTVWIVGRRGPL 201 (460)
T ss_dssp HHHHHHHHTCCC--CEEEEECSSCGG
T ss_pred HHHHHHHhhCCC--cEEEEEEcCChH
Confidence 232 359999998854
No 88
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=99.82 E-value=5.3e-20 Score=198.75 Aligned_cols=189 Identities=14% Similarity=0.162 Sum_probs=118.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.+||+|||||++|+++|..|++.|++|+|||+++.+||.|.. .+...+ ... ...++...
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~~-~~k~~i-------------------~~~-~~~~~~~~ 186 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLLD-TAGEQI-------------------DGM-DSSAWIEQ 186 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGGG-SSCCEE-------------------TTE-EHHHHHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceecc-CCcccc-------------------CCC-CHHHHHHH
Confidence 479999999999999999999999999999999889988773 111111 000 12344444
Q ss_pred HHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC-CCceeEEEeCEEEEeecc
Q 014821 83 IQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK-NHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 83 l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~i~~d~vIlAtG~ 160 (418)
+.+...++ ++ .+..+++|.++.... ...... . ..+.+.+...+.. .+...++.||+||||||+
T Consensus 187 ~~~~l~~~~~v--~~~~~~~V~~i~~~~----~~~~v~-------~--~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs 251 (965)
T 2gag_A 187 VTSELAEAEET--THLQRTTVFGSYDAN----YLIAAQ-------R--RTVHLDGPSGPGVSRERIWHIRAKQVVLATGA 251 (965)
T ss_dssp HHHHHHHSTTE--EEESSEEEEEEETTT----EEEEEE-------E--CSTTCSSCCCTTCCSEEEEEEEEEEEEECCCE
T ss_pred HHHHHhhcCCc--EEEeCCEEEeeecCC----ceeeeE-------e--ecccccccccccCCCCceEEEECCEEEECCCC
Confidence 44445554 66 678888898886433 000000 0 0000111110000 012247999999999996
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
. |..|.++ |.+. ..++++..+..... ......+++|+|||+|.+|+|+|..|...+.. |+++.+++.
T Consensus 252 ~---p~~~~ip---G~~~--~gv~~~~~~~~~l~--~~~~~~gk~vvViGgG~~g~E~A~~L~~~G~~---Vtvv~~~~~ 318 (965)
T 2gag_A 252 H---ERPIVFE---NNDR--PGIMLAGAVRSYLN--RYGVRAGARIAVATTNDSAYELVRELAATGGV---VAVIDARSS 318 (965)
T ss_dssp E---ECCCCCB---TCCS--TTEEEHHHHHHHHH--TTCEESCSSEEEEESSTTHHHHHHHHGGGTCC---SEEEESCSS
T ss_pred c---cCCCCCC---CCCC--CCEEEhHHHHHHHH--hcCCCCCCeEEEEcCCHHHHHHHHHHHHcCCc---EEEEECCCc
Confidence 4 6667677 6542 23454432211110 01223568999999999999999999998765 999998764
No 89
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=99.81 E-value=3.5e-21 Score=190.88 Aligned_cols=263 Identities=11% Similarity=0.104 Sum_probs=159.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHh--CCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL--KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~--~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++||+|||||++|+++|..|++ .+.+|+|||+++.++..... + .+. .......++.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~~~--~-----------~~~---------~g~~~~~~~~ 59 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTPAF--P-----------HLA---------MGWRKFEDIS 59 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGGGH--H-----------HHH---------HTCSCGGGSE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCCCc--c-----------hhc---------cCccCHHHHH
Confidence 3799999999999999999999 78999999998754421100 0 000 0000111222
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
..+.+.+++.++ .+.. .+|+.++... ..|.+.++ .++.||+||+|||+
T Consensus 60 ~~~~~~~~~~gv--~~~~-~~v~~id~~~------------------------~~v~~~~g-----~~i~~d~liiAtG~ 107 (430)
T 3h28_A 60 VPLAPLLPKFNI--EFIN-EKAESIDPDA------------------------NTVTTQSG-----KKIEYDYLVIATGP 107 (430)
T ss_dssp EESTTTGGGGTE--EEEC-SCEEEEETTT------------------------TEEEETTC-----CEEECSEEEECCCC
T ss_pred HHHHHHHHhcCC--EEEE-EEEEEEECCC------------------------CEEEECCC-----cEEECCEEEEcCCc
Confidence 222333445676 5554 5888887655 35666655 47999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhh-----hhhhcCCCEEEEEcCCCCH------HHHHHHHhh----h
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEA-----AANLVKGKRVTVVGLQKSA------LDIAMECTT----A 225 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~v~VvG~G~sa------~e~a~~l~~----~ 225 (418)
. |..|.+ .. .+...+ +....+.. .....++++++|||+|.+| +|+|..+.. .
T Consensus 108 ~---~~~pg~------~~-~g~~~~---~~~~~~a~~~~~~~~~~~~~~~~vVVGgG~~~~~~G~~~E~a~~la~~l~~~ 174 (430)
T 3h28_A 108 K---LVFGAE------GQ-EENSTS---ICTAEHALETQKKLQELYANPGPVVIGAIPGVSCFGPAYEFALMLHYELKKR 174 (430)
T ss_dssp E---EECCSB------TH-HHHSCC---CSSHHHHHHHHHHHHHHHHSCCCEEEEECTTCCCCHHHHHHHHHHHHHHHHT
T ss_pred c---cccCCC------CC-cCCccC---cCCHHHHHHHHHHHHHHHhcCCeEEEEcCCCCCcCcHHHHHHHHHHHHHHHc
Confidence 4 555532 21 011111 11111110 0111224567899998765 888865543 3
Q ss_pred cCC-CCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhc
Q 014821 226 NGL-ENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLA 304 (418)
Q Consensus 226 ~~~-~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (418)
+.. ..+|+++.+.+. +.+... .+.
T Consensus 175 g~~~~~~V~~v~~~~~-~~~~~l-~~~----------------------------------------------------- 199 (430)
T 3h28_A 175 GIRYKVPMTFITSEPY-LGHFGV-GGI----------------------------------------------------- 199 (430)
T ss_dssp TCGGGCCEEEECSSSS-TTCTTT-TCS-----------------------------------------------------
T ss_pred CCccceEEEEecCCcc-cccccc-Ccc-----------------------------------------------------
Confidence 321 024888887653 111000 000
Q ss_pred ccCCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEecCcEEEcC----CceeeeccEEEEccCCCCCcc
Q 014821 305 KFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCEDGIVVDG----QTTPLKTDLVILATGFKGDVK 379 (418)
Q Consensus 305 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~~~v~~~~----g~~~~~~D~Vi~atG~~~~~~ 379 (418)
+.....+.+.+++.+|+++.+. +.+++.+++++++ +++ +++|.||+|+|+.++..
T Consensus 200 -------------------~~~~~~l~~~l~~~GV~i~~~~~v~~v~~~~v~~~~~~~~g~~-i~~D~vv~a~G~~~~~~ 259 (430)
T 3h28_A 200 -------------------GASKRLVEDLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHE-VPAKFTMFMPSFQGPEV 259 (430)
T ss_dssp -------------------TTHHHHHHHHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEE-EECSEEEEECEEECCHH
T ss_pred -------------------hHHHHHHHHHHHHCCCEEEeCCEEEEEeCCeEEEEecCCCceE-EeeeEEEECCCCccchh
Confidence 0011123346677789999887 8899988888887 677 99999999999998732
Q ss_pred hhccccchhhhh--hhcCCCCC-Cccceeee-eeccCcccc
Q 014821 380 LKNIFLSQTFQD--YLAGSPTE-KLPLYRSA-HIYIDTLTY 416 (418)
Q Consensus 380 ~~~~l~~~~~~~--~~~~~~~~-~~~~~~~~-~~~~~~~~~ 416 (418)
+.+ ..+.+.++ .+.++..+ .+++||||.
T Consensus 260 ---------l~~~~~gl~~~~G~~i~Vd~~l~t~~~~~Ifa 291 (430)
T 3h28_A 260 ---------VASAGDKVANPANKMVIVNRCFQNPTYKNIFG 291 (430)
T ss_dssp ---------HHTTCTTTBCTTTCCBCCCTTSBCSSSTTEEE
T ss_pred ---------HhhccccCcCCCCCEEecCccccCCCCCCEEE
Confidence 222 12335667 89998888 669999995
No 90
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=99.77 E-value=2.4e-20 Score=184.81 Aligned_cols=76 Identities=12% Similarity=0.097 Sum_probs=56.2
Q ss_pred hhhccCcEEEeccC-ceeEecCcEEEcC--C-ceeeeccEEEEccCCCCCcchhccccchhhhhhh---cCCCCCCccce
Q 014821 332 DKVEEGSIILKKSQ-DFSFCEDGIVVDG--Q-TTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYL---AGSPTEKLPLY 404 (418)
Q Consensus 332 ~~~~~~~v~~~~~~-v~~~~~~~v~~~~--g-~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~---~~~~~~~~~~~ 404 (418)
+.+++.+|+++.+. +..++++++.+++ | .+++++|.||+|+|++++. ++.... ..+.++.+.++
T Consensus 208 ~~l~~~GV~~~~~~~v~~v~~~~~~~~~~~g~~~~i~~d~vi~~~G~~~~~---------~~~~~~~~l~~~~~g~i~vd 278 (430)
T 3hyw_A 208 DLFAERNIDWIANVAVKAIEPDKVIYEDLNGNTHEVPAKFTMFMPSFQGPE---------VVASAGDKVANPANKMVIVN 278 (430)
T ss_dssp HHHHHTTCEEECSCEEEEECSSEEEEECTTSCEEEEECSEEEEECEEECCH---------HHHTTCTTTBCTTTCCBCCC
T ss_pred HHHHhCCeEEEeCceEEEEeCCceEEEeeCCCceEeecceEEEeccCCCch---------HHHhcccccccCCceEEEec
Confidence 45667789999997 8899999888764 2 2239999999999999882 233221 21335668888
Q ss_pred eee-eeccCcccc
Q 014821 405 RSA-HIYIDTLTY 416 (418)
Q Consensus 405 ~~~-~~~~~~~~~ 416 (418)
..+ ++++||||.
T Consensus 279 ~~lq~t~~~~IfA 291 (430)
T 3hyw_A 279 RCFQNPTYKNIFG 291 (430)
T ss_dssp TTSBCSSSTTEEE
T ss_pred ccccCCCCCCEEE
Confidence 888 799999995
No 91
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=99.77 E-value=1.3e-18 Score=170.72 Aligned_cols=267 Identities=12% Similarity=0.057 Sum_probs=154.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC--CceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~--~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
-|+|||||||++|+++|..|++.+ .+|+|||+++... ..+.... ..... . +...+.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~-----~~p~~~~-v~~g~-------~---------~~~~~~ 59 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYY-----TCYMSNE-VIGGD-------R---------ELASLR 59 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEE-----CSTTHHH-HHHTS-------S---------CGGGGE
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCC-----CccCHHH-HhcCC-------C---------CHHHHh
Confidence 378999999999999999998865 5899999976321 0010000 00000 0 000111
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.-++.+ ...++ ++. ..+|++|+.+. ..|.+.++ .++.||+||+|||+
T Consensus 60 ~~~~~~-~~~gv--~~i-~~~v~~id~~~------------------------~~v~~~~g-----~~i~yd~LviAtG~ 106 (401)
T 3vrd_B 60 VGYDGL-RAHGI--QVV-HDSALGIDPDK------------------------KLVKTAGG-----AEFAYDRCVVAPGI 106 (401)
T ss_dssp ECSHHH-HHTTC--EEE-CSCEEEEETTT------------------------TEEEETTS-----CEEECSEEEECCCE
T ss_pred hCHHHH-HHCCC--EEE-EeEEEEEEccC------------------------cEEEeccc-----ceeecceeeeccCC
Confidence 111112 23465 443 46899998765 45777666 58999999999995
Q ss_pred CCCCCCCCCCCCCCCCCCCCc-eEEeccCCCCchhhhhh--hhcCCCEEEEEcCCCC-----------HHHHHHHHhhhc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHG-KVIHSMDYSDMDYEAAA--NLVKGKRVTVVGLQKS-----------ALDIAMECTTAN 226 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~v~VvG~G~s-----------a~e~a~~l~~~~ 226 (418)
. +.++.++ |.+.... ...|+....+....... ........+|++.|.. +.+++..+...+
T Consensus 107 ~---~~~~~i~---G~~e~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~~~~~i~~~~a~~e~~~~~a~~~~~~~ 180 (401)
T 3vrd_B 107 D---LLYDKIE---GYSEALAAKLPHAWKAGEQTALLRRQLESMDDGGVVIIAPPAPPFRCPPGPYERASQIAHYLKAHK 180 (401)
T ss_dssp E---ECGGGSB---TCCSGGGGTSCCCSSCSHHHHHHHHHHHHSCTTCEEEEECCSSSCBCTTHHHHHHHHHHHHHHHHC
T ss_pred c---cccCCcc---CchhhcccCccceeccHHHHHHHHHHHHhcccCCcEEEecCCccEEeehHHHHHHHHHHHHHHhcC
Confidence 4 6666666 6554321 12222211111100001 1123344455554433 235555555554
Q ss_pred CCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhhHHHHHHHHHHHHHHHhhhhhccc
Q 014821 227 GLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLSPLRWAISKFVEADIKKKHRLAKF 306 (418)
Q Consensus 227 ~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (418)
.. .+|+++.+.+...... .+...+...
T Consensus 181 ~~-~~v~i~~~~~~~~~~~------------------------------------------~~~~~~~~~---------- 207 (401)
T 3vrd_B 181 SK-SKVIILDNSQTFSKQA------------------------------------------QFTKGWERL---------- 207 (401)
T ss_dssp TT-CEEEEECSSSSCTTHH------------------------------------------HHHHHHHHH----------
T ss_pred CC-CEEEEEcccccccccc------------------------------------------cccHHHHHH----------
Confidence 43 4688888765421110 000000000
Q ss_pred CCCCCcccccccccccccccCcchhhhhccCcEEEeccC-ceeEec----CcEEEcCCceeeeccEEEEccCCCCCcchh
Q 014821 307 GMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQ-DFSFCE----DGIVVDGQTTPLKTDLVILATGFKGDVKLK 381 (418)
Q Consensus 307 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-v~~~~~----~~v~~~~g~~~~~~D~Vi~atG~~~~~~~~ 381 (418)
+...+++..|+++.+. +..++. ..+.+++|++ +++|.|++|+|.+++
T Consensus 208 -----------------------~~~~l~~~gi~v~~~~~v~~v~~~~~~~~v~~~~g~~-i~~D~vi~~~g~~~~---- 259 (401)
T 3vrd_B 208 -----------------------YGFGTENALIEWHPGPDAAVVKTDTEAMTVETSFGET-FKAAVINLIPPQRAG---- 259 (401)
T ss_dssp -----------------------SCTTSTTCSEEEECTTTTCEEEEETTTTEEEETTSCE-EECSEEEECCCEEEC----
T ss_pred -----------------------HHHHHHhcCcEEEeCceEEEEEecccceEEEcCCCcE-EEeeEEEEecCcCCc----
Confidence 1124566778888876 555542 2488899999 999999999999887
Q ss_pred ccccchhhhhhhcCCCCCCccceee-e-eeccCcccc
Q 014821 382 NIFLSQTFQDYLAGSPTEKLPLYRS-A-HIYIDTLTY 416 (418)
Q Consensus 382 ~~l~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~ 416 (418)
.++.+..+.+..|++.++.. + ++++||||.
T Consensus 260 -----~~~~~~gl~~~~G~i~VD~~tl~~t~~p~VfA 291 (401)
T 3vrd_B 260 -----KIAQSASLTNDSGWCPVDIRTFESSLQPGIHV 291 (401)
T ss_dssp -----HHHHHTTCCCTTSSBCBCTTTCBBSSSTTEEE
T ss_pred -----hhHhhccccccCCCEEECCCcceecCCCCEEE
Confidence 45566666677889999876 4 899999995
No 92
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=99.77 E-value=6.1e-19 Score=191.73 Aligned_cols=174 Identities=16% Similarity=0.235 Sum_probs=112.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
.+||+|||||++|+++|..|++.|+ +|+|||+.+.+||.+....|.. ....++.+
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~~~~ip~~------------------------~~~~~~~~ 242 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLSTSEIPQF------------------------RLPYDVVN 242 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHHHHTSCTT------------------------TSCHHHHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccccccCCcc------------------------cCCHHHHH
Confidence 4689999999999999999999999 7999999888998765433321 11134566
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+..+.++++++ .+.+++.+.. ..+++.+. ..+.||+||+|||+.
T Consensus 243 ~~~~~~~~~gv--~~~~~~~v~~-----------------------------~~v~~~~~-----~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 243 FEIELMKDLGV--KIICGKSLSE-----------------------------NEITLNTL-----KEEGYKAAFIGIGLP 286 (1025)
T ss_dssp HHHHHHHTTTC--EEEESCCBST-----------------------------TSBCHHHH-----HHTTCCEEEECCCCC
T ss_pred HHHHHHHHCCc--EEEcccEecc-----------------------------ceEEhhhc-----CccCCCEEEEecCCC
Confidence 66677777787 6666554410 11333332 246799999999963
Q ss_pred CCCCCCCCC-CCCCCCCCCCceEEeccCCCCchhhh--------hh-hhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCC
Q 014821 162 SDVPNIPEF-PPKKGPEAFHGKVIHSMDYSDMDYEA--------AA-NLVKGKRVTVVGLQKSALDIAMECTTANGLENP 231 (418)
Q Consensus 162 ~~~p~~p~~-~~~~g~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~ 231 (418)
.|..+++ + |.+... .++++.++....... .. ....+++|+|||+|.+|+|+|..+...|. ++
T Consensus 287 --~p~~l~~~~---G~~~~~-gv~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~VvVIGgG~~g~e~A~~~~~~G~--~~ 358 (1025)
T 1gte_A 287 --EPKTDDIFQ---GLTQDQ-GFYTSKDFLPLVAKSSKAGMCACHSPLPSIRGAVIVLGAGDTAFDCATSALRCGA--RR 358 (1025)
T ss_dssp --EECCCGGGT---TCCTTT-TEEEHHHHHHHHHHHHCBTTBSCCCCCCCCCSEEEEECSSHHHHHHHHHHHHTTC--SE
T ss_pred --CCCCCCCCC---CCCCCC-CEEEhHHHHHHHHhhcccccccccccccccCCcEEEECCChHHHHHHHHHHHcCC--CE
Confidence 3554432 3 333222 244433321100000 00 01236799999999999999999988875 25
Q ss_pred eEEEEecCccccc
Q 014821 232 CTVLYRTEHWNIP 244 (418)
Q Consensus 232 V~~~~r~~~~~~~ 244 (418)
|++++|++..+++
T Consensus 359 Vtvv~r~~~~~~~ 371 (1025)
T 1gte_A 359 VFLVFRKGFVNIR 371 (1025)
T ss_dssp EEEECSSCGGGCC
T ss_pred EEEEEecChhhCC
Confidence 9999998754444
No 93
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.75 E-value=1.3e-18 Score=175.22 Aligned_cols=157 Identities=17% Similarity=0.182 Sum_probs=100.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.+||+|||||++|+++|..|++. .+|+|||+++.+||.|...... .+. ++ . ...++...
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~~~~~~--------~~g-----~~----~---~~~~~~~~ 166 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMWLKGIK--------QEG-----FN----K---DSRKVVEE 166 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGGGTCSE--------ETT-----TT----E---EHHHHHHH
T ss_pred cCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeeeccccc--------cCC-----CC----C---CHHHHHHH
Confidence 46999999999999999999999 9999999998888876652110 000 00 0 22333333
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.. +.++ .++++++|.+++... +.+.+...+. +....+.||+||+|||+.
T Consensus 167 l~~~l-~~~v--~~~~~~~v~~i~~~~----------------------~~~~~~~~~~--~~~~~~~~d~lvlAtGa~- 218 (493)
T 1y56_A 167 LVGKL-NENT--KIYLETSALGVFDKG----------------------EYFLVPVVRG--DKLIEILAKRVVLATGAI- 218 (493)
T ss_dssp HHHTC-CTTE--EEETTEEECCCEECS----------------------SSEEEEEEET--TEEEEEEESCEEECCCEE-
T ss_pred HHHHH-hcCC--EEEcCCEEEEEEcCC----------------------cEEEEEEecC--CeEEEEECCEEEECCCCC-
Confidence 33222 3355 677888998888765 4455543222 333479999999999965
Q ss_pred CCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 163 DVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 163 ~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
|..|.++ |.+. . .++....+.... ......++++++|||+|.+|+|
T Consensus 219 --~~~~~~~---g~~~-~-gv~~~~~~~~~~--~~~~~~~~~~vvViGgG~~gle 264 (493)
T 1y56_A 219 --DSTMLFE---NNDM-P-GVFRRDFALEVM--NVWEVAPGRKVAVTGSKADEVI 264 (493)
T ss_dssp --ECCCCCT---TTTS-T-TEEEHHHHHHHH--HTSCBCSCSEEEEESTTHHHHH
T ss_pred --ccCCCCC---CCCC-C-CEEEcHHHHHHH--HhcccCCCCEEEEECCCHHHHH
Confidence 6666676 6542 2 244432221110 0011345789999999999998
No 94
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.37 E-value=3.7e-13 Score=131.65 Aligned_cols=136 Identities=18% Similarity=0.304 Sum_probs=88.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcce--e---cCCccccc------------c---
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTM--L---QTPKQLYQ------------F--- 60 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~--l---~~~~~~~~------------~--- 60 (418)
|+.+||+|||||++|+++|..|+++|.+|+|||+++.+|+.|...-.+.. . ..|...+. |
T Consensus 2 M~~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 2 SQYSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 45689999999999999999999999999999999888765432000000 0 00100000 0
Q ss_pred --------CCCCCCC-CCCCCCC--ChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCC
Q 014821 61 --------SDYPWPD-SVTTDFP--DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (418)
Q Consensus 61 --------~~~~~~~-~~~~~~~--~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (418)
...++.. .....|+ ....+.+++...+++.++ +++++++|+++...+ +.
T Consensus 82 ~~~~~~~~~Gi~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~Gv--~i~~~~~v~~i~~~~--~g---------------- 141 (401)
T 2gqf_A 82 DFISLVAEQGITYHEKELGQLFCDEGAEQIVEMLKSECDKYGA--KILLRSEVSQVERIQ--ND---------------- 141 (401)
T ss_dssp HHHHHHHHTTCCEEECSTTEEEETTCTHHHHHHHHHHHHHHTC--EEECSCCEEEEEECC--SC----------------
T ss_pred HHHHHHHhCCCceEECcCCEEccCCCHHHHHHHHHHHHHHCCC--EEEeCCEEEEEEccc--Cc----------------
Confidence 0011100 0111222 567888889998888898 899999999998762 00
Q ss_pred CCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 130 ~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
.++.|.|.+.++ ++.||+||+|||..+
T Consensus 142 ~~~~~~v~~~~g------~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 142 EKVRFVLQVNST------QWQCKNLIVATGGLS 168 (401)
T ss_dssp SSCCEEEEETTE------EEEESEEEECCCCSS
T ss_pred CCCeEEEEECCC------EEECCEEEECCCCcc
Confidence 013477765432 699999999999873
No 95
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=99.32 E-value=5.5e-12 Score=122.45 Aligned_cols=137 Identities=17% Similarity=0.195 Sum_probs=88.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc----------c-------------CCcceecCCccc
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK----------T-------------VETTMLQTPKQL 57 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~----------~-------------~~~~~l~~~~~~ 57 (418)
|+++||+|||||++|+++|..|+++|++|+|||+++.+|..... . ..+.++..+...
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCc
Confidence 88999999999999999999999999999999998766432110 0 000111111110
Q ss_pred cccC-CCCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEE
Q 014821 58 YQFS-DYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTV 136 (418)
Q Consensus 58 ~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 136 (418)
.... ..............+..+...|.+.+.+.|. .+.++++|+++..+. +....+
T Consensus 82 ~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~--~~~~~~~v~~~~~~~---------------------~~~~~v 138 (397)
T 3oz2_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKEN---------------------GKVAGA 138 (397)
T ss_dssp SCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEET---------------------TEEEEE
T ss_pred eEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCc--EEeeeeeeeeeeecc---------------------ceeeee
Confidence 0000 0000000011224678888899999888898 899999999988766 111222
Q ss_pred EEecCCCCceeEEEeCEEEEeeccCC
Q 014821 137 AVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 137 ~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
.... ++...++.+|.||.|+|..|
T Consensus 139 ~~~~--~~~~~~~~a~~vIgAdG~~S 162 (397)
T 3oz2_A 139 KIRH--NNEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEE--TTEEEEEEEEEEEECCCTTC
T ss_pred eecc--cccceEEEEeEEEeCCcccc
Confidence 2222 24556899999999999885
No 96
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=99.27 E-value=1.7e-11 Score=119.38 Aligned_cols=136 Identities=16% Similarity=0.203 Sum_probs=90.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccccc----------C---Cc-ceecCCccccccCCC---
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKT----------V---ET-TMLQTPKQLYQFSDY--- 63 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~----------~---~~-~~l~~~~~~~~~~~~--- 63 (418)
|+++||+|||||++|+++|..|+++|++|+|||+...+|+..... . +. .....+...+.+...
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~ 81 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEK 81 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCS
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCC
Confidence 677999999999999999999999999999999988665422210 0 00 000000000111000
Q ss_pred ---CCCC----CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE-
Q 014821 64 ---PWPD----SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT- 135 (418)
Q Consensus 64 ---~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (418)
.+.. ........+..+..+|.+.+.+.|+ .++++++|++++..+ +.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~v~g 137 (397)
T 3cgv_A 82 RPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGA--DVWVKSPALGVIKEN----------------------GKVAG 137 (397)
T ss_dssp SCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTC--EEESSCCEEEEEEET----------------------TEEEE
T ss_pred EEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCC--EEEECCEEEEEEEeC----------------------CEEEE
Confidence 0000 0012233677888899998888888 899999999998866 4455
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
|.+.+. +...++.+|.||.|+|..|
T Consensus 138 v~~~~~--~~~~~~~a~~vV~A~G~~s 162 (397)
T 3cgv_A 138 AKIRHN--NEIVDVRAKMVIAADGFES 162 (397)
T ss_dssp EEEEET--TEEEEEEEEEEEECCCTTC
T ss_pred EEEEEC--CeEEEEEcCEEEECCCcch
Confidence 666543 3346899999999999875
No 97
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.24 E-value=4e-11 Score=117.66 Aligned_cols=134 Identities=14% Similarity=0.301 Sum_probs=88.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccccc------------CCccee-cCCcccc----cc----
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKT------------VETTML-QTPKQLY----QF---- 60 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~------------~~~~~l-~~~~~~~----~~---- 60 (418)
+.+||+|||||++|+++|..|++.|.+|+|||+++.+|+.+... .+...+ ..+.... .|
T Consensus 26 ~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 105 (417)
T 3v76_A 26 EKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRPQD 105 (417)
T ss_dssp --CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCHHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCHHH
Confidence 35799999999999999999999999999999999887654210 000000 0000000 00
Q ss_pred -------CCCCCCCC-CCCCC--CChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCC
Q 014821 61 -------SDYPWPDS-VTTDF--PDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGS 130 (418)
Q Consensus 61 -------~~~~~~~~-~~~~~--~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (418)
...++... ....| .....+.+.+.+.+++.++ .++++++|+++...+
T Consensus 106 ~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~Gv--~i~~~~~V~~i~~~~--------------------- 162 (417)
T 3v76_A 106 FVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEAGV--QLRLETSIGEVERTA--------------------- 162 (417)
T ss_dssp HHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHHTC--EEECSCCEEEEEEET---------------------
T ss_pred HHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHCCC--EEEECCEEEEEEEeC---------------------
Confidence 00110000 00111 2456888889888888898 899999999998876
Q ss_pred CCceEEEEecCCCCceeEEEeCEEEEeeccCCCCCC
Q 014821 131 RGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSDVPN 166 (418)
Q Consensus 131 ~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~~p~ 166 (418)
+.|.|.+.++ ++.||.||+|+|..| .|.
T Consensus 163 -~~~~V~~~~g------~i~ad~VIlAtG~~S-~p~ 190 (417)
T 3v76_A 163 -SGFRVTTSAG------TVDAASLVVASGGKS-IPK 190 (417)
T ss_dssp -TEEEEEETTE------EEEESEEEECCCCSS-CGG
T ss_pred -CEEEEEECCc------EEEeeEEEECCCCcc-CCC
Confidence 4577766543 799999999999883 443
No 98
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.23 E-value=9.8e-11 Score=101.12 Aligned_cols=108 Identities=21% Similarity=0.397 Sum_probs=79.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
+||+|||||++|+.+|..|++.|.+++|+|+.+..-. .. .....+..+ .......++.+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~---~~---------~~~~~~~~~-------~~~~~~~~~~~~l 62 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVK---GV---------SRVPNYPGL-------LDEPSGEELLRRL 62 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTT---TC---------SCCCCSTTC-------TTCCCHHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCccc---Cc---------hhhhccCCC-------cCCCCHHHHHHHH
Confidence 7999999999999999999999999999999762210 00 000001100 0123457889999
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.++++++ ++.++ +|++++..+ +.+.|.+.++ ++.||.||+|+|..
T Consensus 63 ~~~~~~~gv--~v~~~-~v~~i~~~~----------------------~~~~v~~~~g------~i~ad~vI~A~G~~ 109 (180)
T 2ywl_A 63 EAHARRYGA--EVRPG-VVKGVRDMG----------------------GVFEVETEEG------VEKAERLLLCTHKD 109 (180)
T ss_dssp HHHHHHTTC--EEEEC-CCCEEEECS----------------------SSEEEECSSC------EEEEEEEEECCTTC
T ss_pred HHHHHHcCC--EEEeC-EEEEEEEcC----------------------CEEEEEECCC------EEEECEEEECCCCC
Confidence 999999998 88888 999998765 4466765433 79999999999965
No 99
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.23 E-value=6.7e-11 Score=106.75 Aligned_cols=123 Identities=22% Similarity=0.183 Sum_probs=81.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCcccc-ccCCCCCCCCCCCCCCChhHH
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLY-QFSDYPWPDSVTTDFPDHNQV 79 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (418)
|+.+||+|||||++|+++|..|++.|.+++|||++....|.+ ..+...-......+ .+.+ ..-+.+..+
T Consensus 1 M~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G~~--~~~~~~~~~~~~~~~~~~d--------~~g~~~~~~ 70 (232)
T 2cul_A 1 MAAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVMMP--FLPPKPPFPPGSLLERAYD--------PKDERVWAF 70 (232)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC--SSCCCSCCCTTCHHHHHCC--------TTCCCHHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCCcc--cCccccccchhhHHhhhcc--------CCCCCHHHH
Confidence 788999999999999999999999999999999974333322 11111000000000 0000 011256688
Q ss_pred HHHHHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 80 LDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 80 ~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
..++.+.++++ ++ .++ +++|+++...+ +..+.|.+.++ .++.||+||+|+
T Consensus 71 ~~~l~~~~~~~~gv--~i~-~~~v~~i~~~~---------------------~~v~~v~~~~g-----~~i~a~~VV~A~ 121 (232)
T 2cul_A 71 HARAKYLLEGLRPL--HLF-QATATGLLLEG---------------------NRVVGVRTWEG-----PPARGEKVVLAV 121 (232)
T ss_dssp HHHHHHHHHTCTTE--EEE-ECCEEEEEEET---------------------TEEEEEEETTS-----CCEECSEEEECC
T ss_pred HHHHHHHHHcCCCc--EEE-EeEEEEEEEeC---------------------CEEEEEEECCC-----CEEECCEEEECC
Confidence 88999988887 77 566 67999998765 22245665554 479999999999
Q ss_pred ccCC
Q 014821 159 GRFS 162 (418)
Q Consensus 159 G~~~ 162 (418)
|.++
T Consensus 122 G~~s 125 (232)
T 2cul_A 122 GSFL 125 (232)
T ss_dssp TTCS
T ss_pred CCCh
Confidence 9763
No 100
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.19 E-value=5.2e-11 Score=113.83 Aligned_cols=129 Identities=21% Similarity=0.333 Sum_probs=87.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHh---CCCceEEEeeCCCCCccccccC----CcceecCCccccccC---------------
Q 014821 4 KQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARSDIGGAWIKTV----ETTMLQTPKQLYQFS--------------- 61 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~---~~~~v~iie~~~~~gg~~~~~~----~~~~l~~~~~~~~~~--------------- 61 (418)
+||+|||||++|+++|+.|++ .|++|+|||++..+||.+.... ....+......+...
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~~~~~~ 81 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRFYDELL 81 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHHHHHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHHHHHHH
Confidence 799999999999999999999 8999999999999998776621 222222211111000
Q ss_pred --C--CCCCCC--------CCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCC
Q 014821 62 --D--YPWPDS--------VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (418)
Q Consensus 62 --~--~~~~~~--------~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (418)
. .+|... ....|.....+..+++..+++.+. .++++++|++|+..+
T Consensus 82 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~~g~--~i~~~~~V~~i~~~~-------------------- 139 (342)
T 3qj4_A 82 AYGVLRPLSSPIEGMVMKEGDCNFVAPQGISSIIKHYLKESGA--EVYFRHRVTQINLRD-------------------- 139 (342)
T ss_dssp HTTSCEECCSCEETCCC--CCEEEECTTCTTHHHHHHHHHHTC--EEESSCCEEEEEECS--------------------
T ss_pred hCCCeecCchhhcceeccCCccceecCCCHHHHHHHHHHhcCC--EEEeCCEEEEEEEcC--------------------
Confidence 0 011100 011122233445566666666677 899999999999876
Q ss_pred CCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 130 ~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.|+|.+.++ .++.+|.||+|+...
T Consensus 140 --~~~~v~~~~g-----~~~~ad~vV~A~p~~ 164 (342)
T 3qj4_A 140 --DKWEVSKQTG-----SPEQFDLIVLTMPVP 164 (342)
T ss_dssp --SSEEEEESSS-----CCEEESEEEECSCHH
T ss_pred --CEEEEEECCC-----CEEEcCEEEECCCHH
Confidence 5698888765 357999999999853
No 101
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.18 E-value=1.6e-10 Score=113.55 Aligned_cols=135 Identities=20% Similarity=0.238 Sum_probs=87.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC----CCccccc-c------C--------------CcceecCCccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD----IGGAWIK-T------V--------------ETTMLQTPKQL 57 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~----~gg~~~~-~------~--------------~~~~l~~~~~~ 57 (418)
.+||+|||||++|+++|..|+++|++|+|+|+... .|..... . . .+..+......
T Consensus 5 ~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 84 (421)
T 3nix_A 5 KVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGKEI 84 (421)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETTEE
T ss_pred cCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCCee
Confidence 48999999999999999999999999999999762 2221111 0 0 00000000000
Q ss_pred --cccCCCCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE
Q 014821 58 --YQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (418)
Q Consensus 58 --~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (418)
+.+...............+..+...|.+.+.+.|+ .++++++|++++..+ +.+.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv--~i~~~~~v~~i~~~~----------------------~~~~ 140 (421)
T 3nix_A 85 ADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGV--DVEYEVGVTDIKFFG----------------------TDSV 140 (421)
T ss_dssp EEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTC--EEECSEEEEEEEEET----------------------TEEE
T ss_pred EEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEE
Confidence 01110000000012235678888999999888898 899999999999876 4455
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+... +|...++.+|.||+|+|..|
T Consensus 141 v~v~~~-~g~~~~~~a~~vV~A~G~~s 166 (421)
T 3nix_A 141 TTIEDI-NGNKREIEARFIIDASGYGR 166 (421)
T ss_dssp EEEEET-TSCEEEEEEEEEEECCGGGC
T ss_pred EEEEcC-CCCEEEEEcCEEEECCCCch
Confidence 555432 24445799999999999875
No 102
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.12 E-value=6e-10 Score=113.09 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=90.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-----------------------cCC--cc------ee
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-----------------------TVE--TT------ML 51 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-----------------------~~~--~~------~l 51 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+..+..-+. ..+ .. ..
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 84 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIRLA 84 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEEEE
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeeeEE
Confidence 589999999999999999999999999999998755321000 000 00 00
Q ss_pred cCCc--ccc----ccCC----CCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCccccccccc
Q 014821 52 QTPK--QLY----QFSD----YPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFW 121 (418)
Q Consensus 52 ~~~~--~~~----~~~~----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~ 121 (418)
.... ... .+.. ............++..+..+|.+.+.+.+. .++++++|++++..+ +..
T Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~--~~~------- 153 (535)
T 3ihg_A 85 ESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGG--AIRFGTRLLSFRQHD--DDA------- 153 (535)
T ss_dssp SSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEEC--GGG-------
T ss_pred eccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEECC--CCc-------
Confidence 0000 000 0000 000000013345678899999999998888 899999999999876 000
Q ss_pred CCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 122 NGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 122 ~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
...+++++.+++ ...++.||+||.|+|..|
T Consensus 154 ---------~~~v~v~~~~~~--~~~~i~a~~vV~AdG~~S 183 (535)
T 3ihg_A 154 ---------GAGVTARLAGPD--GEYDLRAGYLVGADGNRS 183 (535)
T ss_dssp ---------CSEEEEEEEETT--EEEEEEEEEEEECCCTTC
T ss_pred ---------cccEEEEEEcCC--CeEEEEeCEEEECCCCcc
Confidence 016777777653 256899999999999985
No 103
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.11 E-value=6.8e-10 Score=105.45 Aligned_cols=130 Identities=16% Similarity=0.281 Sum_probs=81.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-cCCcceecCCcccc-----------------------
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETTMLQTPKQLY----------------------- 58 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-~~~~~~l~~~~~~~----------------------- 58 (418)
++||+|||||++|+++|..|++.|++|+|||+++.+||.+.. ......+......+
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQGHVAEW 81 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHHTSEEEE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhCCCeeec
Confidence 479999999999999999999999999999999888886654 11111111100000
Q ss_pred -----ccCCCCCCC--CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCC
Q 014821 59 -----QFSDYPWPD--SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSR 131 (418)
Q Consensus 59 -----~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (418)
.+....+.. .....+.....+....+..++ ++ .++++++|++++..+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--g~--~i~~~~~v~~i~~~~---------------------- 135 (336)
T 1yvv_A 82 TPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMRG--DM--PVSFSCRITEVFRGE---------------------- 135 (336)
T ss_dssp CCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHHT--TC--CEECSCCEEEEEECS----------------------
T ss_pred cccceeccCcccccCCCCCccEEcCccHHHHHHHHHc--cC--cEEecCEEEEEEEeC----------------------
Confidence 000000000 001111112233333443333 66 799999999999876
Q ss_pred CceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 132 GKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 132 ~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.|.|++.++. ....||+||+|+|..+
T Consensus 136 ~~~~v~~~~g~----~~~~a~~vV~a~g~~~ 162 (336)
T 1yvv_A 136 EHWNLLDAEGQ----NHGPFSHVIIATPAPQ 162 (336)
T ss_dssp SCEEEEETTSC----EEEEESEEEECSCHHH
T ss_pred CEEEEEeCCCc----CccccCEEEEcCCHHH
Confidence 56888876652 2335999999999874
No 104
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.10 E-value=1.7e-10 Score=112.95 Aligned_cols=131 Identities=19% Similarity=0.227 Sum_probs=85.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcc---cccc------CC--cc-----eecCCccccccCCC--
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA---WIKT------VE--TT-----MLQTPKQLYQFSDY-- 63 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~---~~~~------~~--~~-----~l~~~~~~~~~~~~-- 63 (418)
+.+||+|||||++|+++|..|+++|++|+|||+.+.+... .... .. ++ ....+...+.+.+.
T Consensus 22 ~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~ 101 (407)
T 3rp8_A 22 GHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDFRS 101 (407)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEETTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEECCC
Confidence 4689999999999999999999999999999998755311 0000 00 00 00000001111000
Q ss_pred -------CCCC-----CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCC
Q 014821 64 -------PWPD-----SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSR 131 (418)
Q Consensus 64 -------~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (418)
+... ........+..+.+.|.+.+.+ . .++++++|++++..+
T Consensus 102 g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~---------------------- 155 (407)
T 3rp8_A 102 GENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--D--SVQFGKRVTRCEEDA---------------------- 155 (407)
T ss_dssp CCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--G--GEEESCCEEEEEEET----------------------
T ss_pred CCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--C--EEEECCEEEEEEecC----------------------
Confidence 0000 0012234567788888888766 4 799999999999876
Q ss_pred CceEEEEecCCCCceeEEEeCEEEEeeccCCC
Q 014821 132 GKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 132 ~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
+.++|++.++ .++.+|.||.|+|..|.
T Consensus 156 ~~v~v~~~~g-----~~~~a~~vV~AdG~~S~ 182 (407)
T 3rp8_A 156 DGVTVWFTDG-----SSASGDLLIAADGSHSA 182 (407)
T ss_dssp TEEEEEETTS-----CEEEESEEEECCCTTCS
T ss_pred CcEEEEEcCC-----CEEeeCEEEECCCcChH
Confidence 5678887776 48999999999999863
No 105
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.10 E-value=1e-09 Score=102.07 Aligned_cols=137 Identities=15% Similarity=0.189 Sum_probs=83.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhC-CCceEEEeeCCCCCcc-ccc--cCCcceecCCc-cccccCCCCCCCCCCCC--CC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDIGGA-WIK--TVETTMLQTPK-QLYQFSDYPWPDSVTTD--FP 74 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~-~~~v~iie~~~~~gg~-~~~--~~~~~~l~~~~-~~~~~~~~~~~~~~~~~--~~ 74 (418)
..+||+|||||++|+++|..|+++ |.+|+|||+.+.+|+. |.. .+....+..+. .++.-...++... ... ..
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~~-~~~~~~~ 116 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVAYDEQ-DTYVVVK 116 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCCCEEC-SSEEEES
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCCcccC-CCEEEec
Confidence 357999999999999999999997 9999999999877653 322 11111111110 0000001111100 000 01
Q ss_pred ChhHHHHHHHHHHHh-cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEec---------CCCC
Q 014821 75 DHNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED---------AKNH 144 (418)
Q Consensus 75 ~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---------~~~~ 144 (418)
...++...+.+.+.+ .++ .++++++|+++.... +....|.+.. +..+
T Consensus 117 ~~~~~~~~l~~~~~~~~gv--~i~~~~~V~~i~~~~---------------------~~v~gv~~~~~~~~~~~~~g~~g 173 (284)
T 1rp0_A 117 HAALFTSTIMSKLLARPNV--KLFNAVAAEDLIVKG---------------------NRVGGVVTNWALVAQNHHTQSCM 173 (284)
T ss_dssp CHHHHHHHHHHHHHTSTTE--EEEETEEEEEEEEET---------------------TEEEEEEEEEHHHHTCTTTSSCC
T ss_pred CHHHHHHHHHHHHHhcCCC--EEEcCcEEEEEEecC---------------------CeEEEEEEeccccccccCccccC
Confidence 345666666666654 577 899999999998765 1222344431 1123
Q ss_pred ceeEEEeCEEEEeeccCC
Q 014821 145 STEVHQVDFVILCVGRFS 162 (418)
Q Consensus 145 ~~~~i~~d~vIlAtG~~~ 162 (418)
...++.||.||+|+|..|
T Consensus 174 ~~~~i~ad~VV~AtG~~s 191 (284)
T 1rp0_A 174 DPNVMEAKIVVSSCGHDG 191 (284)
T ss_dssp CCEEEEEEEEEECCCSSS
T ss_pred ceEEEECCEEEECCCCch
Confidence 346899999999999764
No 106
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.09 E-value=7.7e-10 Score=113.23 Aligned_cols=137 Identities=14% Similarity=0.154 Sum_probs=89.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcc----ccc-------cC--------------CcceecCC-
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA----WIK-------TV--------------ETTMLQTP- 54 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~----~~~-------~~--------------~~~~l~~~- 54 (418)
|+.+||+|||||++|+++|..|+++|++|+|||+.+..+.. ... .. .+......
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 56789999999999999999999999999999997533211 000 00 00000000
Q ss_pred -cc--ccccCCCCCCC-C-CCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCC
Q 014821 55 -KQ--LYQFSDYPWPD-S-VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (418)
Q Consensus 55 -~~--~~~~~~~~~~~-~-~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (418)
.. .+.|....... . .......+..+...|.+.+.+.|+ .++++++|+++...+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~V~~v~~~~-------------------- 158 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGI--TVHEETPVTDVDLSD-------------------- 158 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEECCS--------------------
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcC--------------------
Confidence 00 00111000000 0 011234678889999999988888 899999999998754
Q ss_pred CCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 130 ~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+..+.|.+.++ |...++.||.||.|+|..|
T Consensus 159 -g~~~~V~~~~~--G~~~~i~AdlVV~AdG~~S 188 (591)
T 3i3l_A 159 -PDRVVLTVRRG--GESVTVESDFVIDAGGSGG 188 (591)
T ss_dssp -TTCEEEEEEET--TEEEEEEESEEEECCGGGC
T ss_pred -CCEEEEEEecC--CceEEEEcCEEEECCCCcc
Confidence 35677887742 4446899999999999885
No 107
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.09 E-value=4.5e-10 Score=110.08 Aligned_cols=137 Identities=16% Similarity=0.140 Sum_probs=86.2
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCc-eEEEeeCCCCCccccc--cCC---------cc-----eecCCccccccCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFH-PIVFEARSDIGGAWIK--TVE---------TT-----MLQTPKQLYQFSDY 63 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~-v~iie~~~~~gg~~~~--~~~---------~~-----~l~~~~~~~~~~~~ 63 (418)
|+.+||+|||||++|+++|..|+++|++ |+|||+.+.++..... ..+ ++ ....+...+.+.+.
T Consensus 2 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~ 81 (410)
T 3c96_A 2 SEPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQ 81 (410)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcC
Confidence 4578999999999999999999999999 9999998765421110 000 00 00000001111100
Q ss_pred --------CC----CCCCCCCCCChhHHHHHHHHHHHh-cC-cccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCC
Q 014821 64 --------PW----PDSVTTDFPDHNQVLDYIQSYASH-FD-LRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG 129 (418)
Q Consensus 64 --------~~----~~~~~~~~~~~~~~~~~l~~~~~~-~~-~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~ 129 (418)
+. ..........+..+.++|.+.+.+ .+ . .++++++|++++. +
T Consensus 82 ~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~--~v~~~~~v~~i~~-~-------------------- 138 (410)
T 3c96_A 82 SGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQ--AVRTGLGVERIEE-R-------------------- 138 (410)
T ss_dssp TSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTT--SEEESEEEEEEEE-E--------------------
T ss_pred CCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCc--EEEECCEEEEEec-C--------------------
Confidence 00 000011223566788888887766 35 4 6899999999987 6
Q ss_pred CCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 130 SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 130 ~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.|++.+..+|...++.||.||.|+|..|
T Consensus 139 --~~v~v~~~~~~~g~~~~~~ad~vV~AdG~~S 169 (410)
T 3c96_A 139 --DGRVLIGARDGHGKPQALGADVLVGADGIHS 169 (410)
T ss_dssp --TTEEEEEEEETTSCEEEEEESEEEECCCTTC
T ss_pred --CccEEEEecCCCCCceEEecCEEEECCCccc
Confidence 4477777663234446899999999999885
No 108
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.09 E-value=2.5e-10 Score=110.73 Aligned_cols=129 Identities=16% Similarity=0.187 Sum_probs=84.2
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc--cCC---------cc-----eecCCccccccCC--
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK--TVE---------TT-----MLQTPKQLYQFSD-- 62 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~--~~~---------~~-----~l~~~~~~~~~~~-- 62 (418)
|+.+||+|||||++|+++|..|+++|++|+|||+.+.+++.-.. ..+ ++ ....+...+.+..
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g 88 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHN 88 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCC
Confidence 45689999999999999999999999999999998765421000 000 00 0000000011100
Q ss_pred -----CCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 63 -----YPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 63 -----~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.+.. .......++..+.++|.+.+.+.++ .++++++|++++. + + .|+
T Consensus 89 ~~~~~~~~~-~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~~-~----------------------~--~v~ 140 (379)
T 3alj_A 89 KSVSKETFN-GLPWRIMTRSHLHDALVNRARALGV--DISVNSEAVAADP-V----------------------G--RLT 140 (379)
T ss_dssp EEEEEECGG-GCCEEEEEHHHHHHHHHHHHHHTTC--EEESSCCEEEEET-T----------------------T--EEE
T ss_pred ceeeeccCC-CCceEEECHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEe-C----------------------C--EEE
Confidence 0000 0012234567888999998888888 8999999999975 4 3 566
Q ss_pred EecCCCCceeEEEeCEEEEeeccCC
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.++ .++.||.||.|+|..|
T Consensus 141 ~~~g-----~~~~ad~vV~AdG~~s 160 (379)
T 3alj_A 141 LQTG-----EVLEADLIVGADGVGS 160 (379)
T ss_dssp ETTS-----CEEECSEEEECCCTTC
T ss_pred ECCC-----CEEEcCEEEECCCccH
Confidence 6555 4799999999999875
No 109
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.08 E-value=4.1e-10 Score=113.75 Aligned_cols=132 Identities=21% Similarity=0.365 Sum_probs=84.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCC-------ccccc--cCCcceecC-----------------Ccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG-------GAWIK--TVETTMLQT-----------------PKQ 56 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~g-------g~~~~--~~~~~~l~~-----------------~~~ 56 (418)
.+||+|||||++|+++|..|++.|++|+|||+...++ +.|.. ..+...+.. ...
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~~~ 186 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVKDP 186 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSCCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEeccc
Confidence 3799999999999999999999999999999987552 22332 001000000 000
Q ss_pred ------cc-ccCCCCCCCCC-CCCCC-----ChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCC
Q 014821 57 ------LY-QFSDYPWPDSV-TTDFP-----DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNG 123 (418)
Q Consensus 57 ------~~-~~~~~~~~~~~-~~~~~-----~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~ 123 (418)
.+ .|..+..+... ....+ ....+.+.+.+.+.+.++ .++++++|+++...+
T Consensus 187 ~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv--~I~~~t~V~~I~~~~-------------- 250 (549)
T 3nlc_A 187 NFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGG--EIRFSTRVDDLHMED-------------- 250 (549)
T ss_dssp TCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTC--EEESSCCEEEEEESS--------------
T ss_pred cccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEEeC--------------
Confidence 00 00000000000 00001 125667778888888888 899999999998765
Q ss_pred CCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 124 NGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 124 ~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+..+.|.+.++ .++.||.||+|+|..+
T Consensus 251 -------~~v~gV~l~~G-----~~i~Ad~VVlA~G~~s 277 (549)
T 3nlc_A 251 -------GQITGVTLSNG-----EEIKSRHVVLAVGHSA 277 (549)
T ss_dssp -------SBEEEEEETTS-----CEEECSCEEECCCTTC
T ss_pred -------CEEEEEEECCC-----CEEECCEEEECCCCCh
Confidence 23455777665 4799999999999874
No 110
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.08 E-value=6.8e-10 Score=108.35 Aligned_cols=131 Identities=24% Similarity=0.338 Sum_probs=82.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCC-----ccccccCCc-cee-c------------CCccccccC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG-----GAWIKTVET-TML-Q------------TPKQLYQFS 61 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~g-----g~~~~~~~~-~~l-~------------~~~~~~~~~ 61 (418)
|..+||+|||||++|+++|..|++.|++|+|||+.+.++ +.+...... ..+ . .+... .+.
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEE
Confidence 345799999999999999999999999999999986542 222211100 000 0 00000 000
Q ss_pred C--------C--CCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCC
Q 014821 62 D--------Y--PWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSR 131 (418)
Q Consensus 62 ~--------~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (418)
+ . +...........+..+.++|.+.+.. . .++++++|++++..+
T Consensus 103 ~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~--~i~~~~~v~~i~~~~---------------------- 156 (398)
T 2xdo_A 103 DEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--D--TVIWDRKLVMLEPGK---------------------- 156 (398)
T ss_dssp CSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--T--SEEESCCEEEEEECS----------------------
T ss_pred CCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--C--EEEECCEEEEEEECC----------------------
Confidence 0 0 00000011123556666666655432 3 689999999999866
Q ss_pred CceEEEEecCCCCceeEEEeCEEEEeeccCCC
Q 014821 132 GKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 132 ~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
+.++|++.++ .++.||.||.|+|..|.
T Consensus 157 ~~v~v~~~~g-----~~~~ad~vV~AdG~~S~ 183 (398)
T 2xdo_A 157 KKWTLTFENK-----PSETADLVILANGGMSK 183 (398)
T ss_dssp SSEEEEETTS-----CCEEESEEEECSCTTCS
T ss_pred CEEEEEECCC-----cEEecCEEEECCCcchh
Confidence 5588887665 47899999999998853
No 111
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.07 E-value=3.4e-10 Score=110.47 Aligned_cols=131 Identities=14% Similarity=0.105 Sum_probs=85.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCc---cccc---------cC-------------CcceecCCcc-
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG---AWIK---------TV-------------ETTMLQTPKQ- 56 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg---~~~~---------~~-------------~~~~l~~~~~- 56 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+.+.. .... .. ....+..+..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g~ 85 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDGE 85 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETTE
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCCC
Confidence 47999999999999999999999999999999765411 0000 00 0000000000
Q ss_pred -ccccCCCCCCCCCCCCCCChhHHHHHHHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCce
Q 014821 57 -LYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKW 134 (418)
Q Consensus 57 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (418)
...+...............+..+.+.|.+.+.+. ++ +++++++|++++..+ +.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv--~i~~~~~v~~i~~~~----------------------~~v 141 (399)
T 2x3n_A 86 LLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATV--EMLFETRIEAVQRDE----------------------RHA 141 (399)
T ss_dssp EEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTE--EEECSCCEEEEEECT----------------------TSC
T ss_pred EEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCc--EEEcCCEEEEEEEcC----------------------Cce
Confidence 0001000000000112356778889999988887 77 899999999998866 456
Q ss_pred --EEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 135 --TVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 135 --~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
.|++.++ .++.+|.||+|+|..|
T Consensus 142 ~g~v~~~~g-----~~~~ad~vV~AdG~~s 166 (399)
T 2x3n_A 142 IDQVRLNDG-----RVLRPRVVVGADGIAS 166 (399)
T ss_dssp EEEEEETTS-----CEEEEEEEEECCCTTC
T ss_pred EEEEEECCC-----CEEECCEEEECCCCCh
Confidence 7777655 4799999999999885
No 112
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.06 E-value=1.2e-09 Score=111.56 Aligned_cols=132 Identities=16% Similarity=0.136 Sum_probs=87.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCc-------------------cccccCCcceecCCcc-------
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG-------------------AWIKTVETTMLQTPKQ------- 56 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg-------------------~~~~~~~~~~l~~~~~------- 56 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+.... .|...... .......
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~-~~~~~~~~~~~~~~ 127 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEG-TQVAKGLPFAGIFT 127 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTS-CCBCSBCCBTTBCT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhc-CcccCCceeCCccc
Confidence 47999999999999999999999999999999775431 11110000 0000000
Q ss_pred -ccccCCCCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE
Q 014821 57 -LYQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (418)
Q Consensus 57 -~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (418)
.+.+....... ......++..+...|.+.+.+.++ .++++++|++++.++ +.++
T Consensus 128 ~~~~~~~~~~~~-~~~~~i~~~~l~~~L~~~a~~~gv--~i~~~~~v~~l~~~~----------------------~~v~ 182 (570)
T 3fmw_A 128 QGLDFGLVDTRH-PYTGLVPQSRTEALLAEHAREAGA--EIPRGHEVTRLRQDA----------------------EAVE 182 (570)
T ss_dssp TCCBGGGSCCSC-CSBBCCCHHHHHHHHHHHHHHHTE--ECCBSCEEEECCBCS----------------------SCEE
T ss_pred ccccccccCCCC-CeeEEeCHHHHHHHHHHHHHhCCC--EEEeCCEEEEEEEcC----------------------CeEE
Confidence 01111111100 012235678888999999888888 899999999998766 5577
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
|++...+ | ..++.+|+||.|+|..|
T Consensus 183 v~~~~~~-G-~~~~~a~~vV~ADG~~S 207 (570)
T 3fmw_A 183 VTVAGPS-G-PYPVRARYGVGCDGGRS 207 (570)
T ss_dssp EEEEETT-E-EEEEEESEEEECSCSSC
T ss_pred EEEEeCC-C-cEEEEeCEEEEcCCCCc
Confidence 7775321 1 25899999999999886
No 113
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.05 E-value=7.3e-10 Score=113.08 Aligned_cols=169 Identities=15% Similarity=0.108 Sum_probs=98.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC-CCCccccccCCcceecC----------Ccc---------ccccCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS-DIGGAWIKTVETTMLQT----------PKQ---------LYQFSD 62 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~-~~gg~~~~~~~~~~l~~----------~~~---------~~~~~~ 62 (418)
.+||+|||||++|+++|..|++.|.+|+|||++. .+|... +.+...... ... ...|..
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~--Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~ 105 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMS--CNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI 105 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCS--SSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCCEEEEeeccccccccc--ccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh
Confidence 5899999999999999999999999999999974 333211 111110000 000 001100
Q ss_pred CCCCCC---C-CCCCCChhHHHHHHHHHHHh-cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 63 YPWPDS---V-TTDFPDHNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 63 ~~~~~~---~-~~~~~~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.....+ + ......+..+...+.+.+++ .++ .+ ++++|+++..++ +..+.|.
T Consensus 106 l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV--~I-~~~~V~~L~~e~---------------------g~V~GV~ 161 (651)
T 3ces_A 106 LNASKGPAVRATRAQADRVLYRQAVRTALENQPNL--MI-FQQAVEDLIVEN---------------------DRVVGAV 161 (651)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEESS---------------------SBEEEEE
T ss_pred hhcccCcccccchhhCCHHHHHHHHHHHHHhCCCC--EE-EEEEEEEEEecC---------------------CEEEEEE
Confidence 000000 0 00112345778888888887 577 66 678999998755 2334566
Q ss_pred EecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
+.++ .++.||.||+|||.++ ..+.++ |...+ ...+ +| |.+|++
T Consensus 162 t~dG-----~~I~Ad~VVLATGt~s---~~~~i~---G~~~~----------------------~~gr---iG-g~~a~e 204 (651)
T 3ces_A 162 TQMG-----LKFRAKAVVLTVGTFL---DGKIHI---GLDNY----------------------SGGR---AG-DPPSIP 204 (651)
T ss_dssp ETTS-----EEEEEEEEEECCSTTT---CCEEEC---C---------------------------------------CCH
T ss_pred ECCC-----CEEECCEEEEcCCCCc---cCcccc---CcccC----------------------CCCC---cc-chhhhH
Confidence 6554 5799999999999763 333344 44321 0112 56 788999
Q ss_pred HHHHHhhhcCCCCCeEEEEe
Q 014821 218 IAMECTTANGLENPCTVLYR 237 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r 237 (418)
++..|...|.. |+.+..
T Consensus 205 LA~~L~~lG~~---v~~~~t 221 (651)
T 3ces_A 205 LSRRLRELPLR---VGRLKT 221 (651)
T ss_dssp HHHHHHTTTCC---EEEECC
T ss_pred HHHHHHhcCCe---EEEecC
Confidence 99999888765 877753
No 114
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.05 E-value=1.2e-09 Score=109.92 Aligned_cols=135 Identities=17% Similarity=0.232 Sum_probs=89.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc------------cC---CcceecCCccccccCCCCC-
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK------------TV---ETTMLQTPKQLYQFSDYPW- 65 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~------------~~---~~~~l~~~~~~~~~~~~~~- 65 (418)
+++||+|||||++|+++|..|+++|++++|||+.+.++..-+. .. +.+.-..+.....|....+
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 89 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGLPID 89 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTEEEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccceecc
Confidence 4689999999999999999999999999999998765321100 00 0000000111111111000
Q ss_pred ----CCCC-CCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEec
Q 014821 66 ----PDSV-TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED 140 (418)
Q Consensus 66 ----~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 140 (418)
.... .....++..+.+.|.+.+.+.++ .++++++|++++.++ +.++|++.+
T Consensus 90 ~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~~~~ 145 (500)
T 2qa1_A 90 FGVLEGAWQAAKTVPQSVTETHLEQWATGLGA--DIRRGHEVLSLTDDG----------------------AGVTVEVRG 145 (500)
T ss_dssp GGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTC--EEEETCEEEEEEEET----------------------TEEEEEEEE
T ss_pred cccCCCCCCceeecCHHHHHHHHHHHHHHCCC--EEECCcEEEEEEEcC----------------------CeEEEEEEc
Confidence 0000 01223567888899999988888 899999999999876 457777776
Q ss_pred CCCCceeEEEeCEEEEeeccCC
Q 014821 141 AKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 141 ~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+. + ..++++|+||.|+|..|
T Consensus 146 ~~-g-~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 146 PE-G-KHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp TT-E-EEEEEESEEEECCCTTC
T ss_pred CC-C-CEEEEeCEEEECCCcch
Confidence 52 2 45899999999999986
No 115
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.04 E-value=1.8e-09 Score=109.81 Aligned_cols=132 Identities=11% Similarity=0.128 Sum_probs=86.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-----------------------cCCc------ceecC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-----------------------TVET------TMLQT 53 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-----------------------~~~~------~~l~~ 53 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+.++...+. ..+. ..+..
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 105 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWVTR 105 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEESS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEecc
Confidence 479999999999999999999999999999998765421110 0000 00000
Q ss_pred Ccc--ccccCCCCC--------CCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCC
Q 014821 54 PKQ--LYQFSDYPW--------PDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNG 123 (418)
Q Consensus 54 ~~~--~~~~~~~~~--------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~ 123 (418)
... ...+. ++. .........++..+.++|.+.+.+. ++++++|++++.++
T Consensus 106 ~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-----v~~~~~v~~~~~~~-------------- 165 (549)
T 2r0c_A 106 VGGHEVYRIP-LGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER-----LRTRSRLDSFEQRD-------------- 165 (549)
T ss_dssp BTSCEEEEEC-CCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG-----EECSEEEEEEEECS--------------
T ss_pred CCCceeEeec-ccccccccccCCCCCcccccCHHHHHHHHHHHHHHh-----cccCcEEEEEEEeC--------------
Confidence 000 00010 000 0000112245667778888877664 78899999998876
Q ss_pred CCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 124 NGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 124 ~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+++++.+..+|...++.||+||.|+|..|
T Consensus 166 --------~~v~v~~~~~~~G~~~~i~a~~vVgADG~~S 196 (549)
T 2r0c_A 166 --------DHVRATITDLRTGATRAVHARYLVACDGASS 196 (549)
T ss_dssp --------SCEEEEEEETTTCCEEEEEEEEEEECCCTTC
T ss_pred --------CEEEEEEEECCCCCEEEEEeCEEEECCCCCc
Confidence 5577887774445557899999999999986
No 116
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.04 E-value=2.9e-10 Score=114.27 Aligned_cols=136 Identities=18% Similarity=0.155 Sum_probs=87.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc-cCCcc-eecCCcccc-ccCCCCCCCCCCCCCCChhHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK-TVETT-MLQTPKQLY-QFSDYPWPDSVTTDFPDHNQV 79 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~-~~~~~-~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (418)
.+||+|||||++|+++|..|++.|++|+|||+.+.+|+.... ..+.. ..-...... ....+... .....++..+
T Consensus 92 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~---~~~~~~~~~l 168 (497)
T 2bry_A 92 NTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGRFCTG---TLDHISIRQL 168 (497)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTTTTCT---TCCEEEHHHH
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccccccc---ccccCCHHHH
Confidence 579999999999999999999999999999998877643111 00000 000000000 00001000 1112345788
Q ss_pred HHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeec
Q 014821 80 LDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVG 159 (418)
Q Consensus 80 ~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG 159 (418)
.++|.+.+++.++ .++++++|++++..+ + .++.+.|.+.+..+|...++.+|+||+|+|
T Consensus 169 ~~~L~~~~~~~gv--~v~~~~~v~~i~~~~--~-----------------~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G 227 (497)
T 2bry_A 169 QLLLLKVALLLGV--EIHWGVKFTGLQPPP--R-----------------KGSGWRAQLQPNPPAQLASYEFDVLISAAG 227 (497)
T ss_dssp HHHHHHHHHHTTC--EEEESCEEEEEECCC--S-----------------TTCCBEEEEESCCCHHHHTCCBSEEEECCC
T ss_pred HHHHHHHHHhCCC--EEEeCCEEEEEEEec--C-----------------CCCEEEEEEEECCCCCEEEEEcCEEEECCC
Confidence 8889888888888 899999999998642 0 023577877432123234689999999999
Q ss_pred cCC
Q 014821 160 RFS 162 (418)
Q Consensus 160 ~~~ 162 (418)
..|
T Consensus 228 ~~S 230 (497)
T 2bry_A 228 GKF 230 (497)
T ss_dssp TTC
T ss_pred CCc
Confidence 874
No 117
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.04 E-value=1.4e-09 Score=109.76 Aligned_cols=136 Identities=15% Similarity=0.260 Sum_probs=86.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC----CCccccc-cCC------cce--e---cCCcc---c------
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD----IGGAWIK-TVE------TTM--L---QTPKQ---L------ 57 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~----~gg~~~~-~~~------~~~--l---~~~~~---~------ 57 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+. .|..+.. ... ++. + ..+.. .
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~~~ 86 (512)
T 3e1t_A 7 VFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWGKE 86 (512)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEecCC
Confidence 47999999999999999999999999999999862 2221111 000 000 0 00000 0
Q ss_pred -----cccCCCCCCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCC
Q 014821 58 -----YQFSDYPWPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG 132 (418)
Q Consensus 58 -----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (418)
+.+...+...........+..+...|.+.+.+.++ +++++++|+++...+ +.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~~~~V~~v~~~~---------------------~~ 143 (512)
T 3e1t_A 87 PEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGV--DVRERHEVIDVLFEG---------------------ER 143 (512)
T ss_dssp SSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTC--EEESSCEEEEEEEET---------------------TE
T ss_pred ccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEEC---------------------CE
Confidence 01110000000012235678889999999988888 899999999999865 12
Q ss_pred ceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 133 KWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 133 ~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
...|.+... +|...++.+|.||.|+|..|
T Consensus 144 v~gv~~~~~-dG~~~~i~ad~VI~AdG~~S 172 (512)
T 3e1t_A 144 AVGVRYRNT-EGVELMAHARFIVDASGNRT 172 (512)
T ss_dssp EEEEEEECS-SSCEEEEEEEEEEECCCTTC
T ss_pred EEEEEEEeC-CCCEEEEEcCEEEECCCcch
Confidence 122444432 24446899999999999885
No 118
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.03 E-value=1.5e-09 Score=105.89 Aligned_cols=131 Identities=18% Similarity=0.207 Sum_probs=82.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC----Cccccc---------cCC--cceecCCccccccCCC-C
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI----GGAWIK---------TVE--TTMLQTPKQLYQFSDY-P 64 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~----gg~~~~---------~~~--~~~l~~~~~~~~~~~~-~ 64 (418)
|..+||+|||||++|+++|..|+++|++|+|||+.+.. |..+.. ... ......+...+.+.+. .
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCC
Confidence 34689999999999999999999999999999997653 111100 000 0000011111111110 0
Q ss_pred ---CCC-CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEec
Q 014821 65 ---WPD-SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED 140 (418)
Q Consensus 65 ---~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 140 (418)
... ........+..+.+.|.+.+ .+. .++++++|++++..+ +.++|++.+
T Consensus 83 g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~--~i~~~~~v~~i~~~~----------------------~~v~v~~~~ 136 (397)
T 2vou_A 83 GERVGSVPADWRFTSYDSIYGGLYELF--GPE--RYHTSKCLVGLSQDS----------------------ETVQMRFSD 136 (397)
T ss_dssp CCEEEEEECCCCEEEHHHHHHHHHHHH--CST--TEETTCCEEEEEECS----------------------SCEEEEETT
T ss_pred CCccccccCcccccCHHHHHHHHHHhC--CCc--EEEcCCEEEEEEecC----------------------CEEEEEECC
Confidence 000 00011233456666666554 256 799999999998876 558888776
Q ss_pred CCCCceeEEEeCEEEEeeccCC
Q 014821 141 AKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 141 ~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+ .++.+|.||.|+|..|
T Consensus 137 g-----~~~~ad~vV~AdG~~S 153 (397)
T 2vou_A 137 G-----TKAEANWVIGADGGAS 153 (397)
T ss_dssp S-----CEEEESEEEECCCTTC
T ss_pred C-----CEEECCEEEECCCcch
Confidence 5 4799999999999885
No 119
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.02 E-value=1.7e-09 Score=108.73 Aligned_cols=134 Identities=19% Similarity=0.203 Sum_probs=89.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc------------c---CCcceecCCccccccCCCC---
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK------------T---VETTMLQTPKQLYQFSDYP--- 64 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~------------~---~~~~~l~~~~~~~~~~~~~--- 64 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+.++...+. . .+.+.-..+.....|....
T Consensus 12 ~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~~~ 91 (499)
T 2qa2_A 12 DASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGRPVDF 91 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTEEEEG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecceeccc
Confidence 579999999999999999999999999999998755321100 0 0000000011111111100
Q ss_pred --CCCCC-CCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecC
Q 014821 65 --WPDSV-TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDA 141 (418)
Q Consensus 65 --~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 141 (418)
..... .....++..+.+.|.+.+.+.+. .++++++|++++.++ +.++|++.++
T Consensus 92 ~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv--~v~~~~~v~~i~~~~----------------------~~v~v~~~~~ 147 (499)
T 2qa2_A 92 GVLEGAHYGVKAVPQSTTESVLEEWALGRGA--ELLRGHTVRALTDEG----------------------DHVVVEVEGP 147 (499)
T ss_dssp GGSTTCCCEEEEEEHHHHHHHHHHHHHHTTC--EEEESCEEEEEEECS----------------------SCEEEEEECS
T ss_pred ccCCCCCCceEecCHHHHHHHHHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEEEEEEcC
Confidence 00000 01223577888999999888888 899999999999876 4577877765
Q ss_pred CCCceeEEEeCEEEEeeccCC
Q 014821 142 KNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 142 ~~~~~~~i~~d~vIlAtG~~~ 162 (418)
. + ..++.+|+||.|+|..|
T Consensus 148 ~-g-~~~~~a~~vVgADG~~S 166 (499)
T 2qa2_A 148 D-G-PRSLTTRYVVGCDGGRS 166 (499)
T ss_dssp S-C-EEEEEEEEEEECCCTTC
T ss_pred C-C-cEEEEeCEEEEccCccc
Confidence 3 3 46899999999999986
No 120
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=99.02 E-value=5.8e-10 Score=110.83 Aligned_cols=138 Identities=14% Similarity=0.095 Sum_probs=86.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC--Cccccc------cCCcceecCC--------ccccc-cCCCC-
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI--GGAWIK------TVETTMLQTP--------KQLYQ-FSDYP- 64 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~--gg~~~~------~~~~~~l~~~--------~~~~~-~~~~~- 64 (418)
.+||+|||||++|+++|..|+++|++|+|||+.+.. |..+.. .+..+.+..+ ...+. +....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 489999999999999999999999999999997643 211110 0000000000 00000 00000
Q ss_pred --CCCCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE-EEEecC
Q 014821 65 --WPDSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVEDA 141 (418)
Q Consensus 65 --~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~ 141 (418)
+.........++..+.+.|.+.+.+.++ .++++++|+++..++ +... |.+.+.
T Consensus 86 ~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv--~i~~~~~v~~i~~~~----------------------~~v~gv~~~~~ 141 (453)
T 3atr_A 86 TVWTVNGEGFELNAPLYNQRVLKEAQDRGV--EIWDLTTAMKPIFED----------------------GYVKGAVLFNR 141 (453)
T ss_dssp CEEEEEEEEEEECHHHHHHHHHHHHHHTTC--EEESSEEEEEEEEET----------------------TEEEEEEEEET
T ss_pred eEEeECCCcEEEcHHHHHHHHHHHHHHcCC--EEEeCcEEEEEEEEC----------------------CEEEEEEEEEc
Confidence 0000001224567888889888888888 899999999998765 3332 555432
Q ss_pred CCCceeEEEeCEEEEeeccCCCC
Q 014821 142 KNHSTEVHQVDFVILCVGRFSDV 164 (418)
Q Consensus 142 ~~~~~~~i~~d~vIlAtG~~~~~ 164 (418)
.+|...++.||.||.|+|..|..
T Consensus 142 ~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 142 RTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp TTTEEEEEECSEEEECCGGGCTT
T ss_pred CCCceEEEEcCEEEECcCCchhh
Confidence 12444589999999999998643
No 121
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.2e-11 Score=117.55 Aligned_cols=151 Identities=13% Similarity=0.099 Sum_probs=91.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHh--CCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL--KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~--~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
.+||+||||||+||+||++|++ .|++|+|||+.+.+||.... .+..+ +...+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~--~~~~~-----------------------~~~~l~ 119 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL--GGQLF-----------------------SAMVMR 119 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC--CSTTC-----------------------CCEEEE
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe--CCccC-----------------------CHHHHH
Confidence 4799999999999999999975 48999999999889886443 11000 000111
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
..+....+++++ .+..+.. .....+.++++++.
T Consensus 120 ~~~~~~~~e~Gv--~~~~~~~---------------------------------------------~~~~~~~~~~~~~~ 152 (326)
T 3fpz_A 120 KPAHLFLQELEI--PYEDEGD---------------------------------------------YVVVKHAALFISTV 152 (326)
T ss_dssp TTTHHHHHHTTC--CCEECSS---------------------------------------------EEEESCHHHHHHHH
T ss_pred HHHHHHHHHcCC--EEEECCc---------------------------------------------ceecceeEEEEcch
Confidence 112233445565 3332110 12334445556663
Q ss_pred CCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 161 FSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 161 ~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
. +..+.++ |...+.+.-......+. .....+++++|||+|.++++.|..+...+.. +++..+...
T Consensus 153 ~---~~~~~~~---g~~~~~~~~~~~~~~~~------~~~~~~~~v~viggg~~av~~a~~~~~~~~~---v~i~~~~~~ 217 (326)
T 3fpz_A 153 L---SKVLQLP---NVKLFNATCVEDLVTRP------PTEKGEVTVAGVVTNWTLVTQAHGTQCAMDP---NVIELAGYK 217 (326)
T ss_dssp H---HHHHTST---TEEEETTEEEEEEEEES------SCSSSSCEEEEEEEEEHHHHTCTTSSSCCCC---EEEEESCBC
T ss_pred h---hhccccc---cceeecccccceeeccC------CcccCCCEEEEEccCceeeehhhhhhhccCc---EEEEeeccc
Confidence 3 4445455 65544443222222222 2345688999999999999998877666554 888877553
No 122
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.00 E-value=1.6e-09 Score=104.09 Aligned_cols=62 Identities=13% Similarity=0.153 Sum_probs=48.7
Q ss_pred ChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEE
Q 014821 75 DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFV 154 (418)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~v 154 (418)
....+...+.+.+++.|. +++++++|++++.++ ++.+.|.+.++ ...++.||.|
T Consensus 148 ~~~~~~~~l~~~~~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g---~~~~~~a~~V 201 (369)
T 3dme_A 148 DSHALMLAYQGDAESDGA--QLVFHTPLIAGRVRP---------------------EGGFELDFGGA---EPMTLSCRVL 201 (369)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEECSCCEEEEEECT---------------------TSSEEEEECTT---SCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHCCC--EEECCCEEEEEEEcC---------------------CceEEEEECCC---ceeEEEeCEE
Confidence 345777888888888898 899999999999876 23477766543 3358999999
Q ss_pred EEeeccCC
Q 014821 155 ILCVGRFS 162 (418)
Q Consensus 155 IlAtG~~~ 162 (418)
|+|+|.++
T Consensus 202 V~A~G~~s 209 (369)
T 3dme_A 202 INAAGLHA 209 (369)
T ss_dssp EECCGGGH
T ss_pred EECCCcch
Confidence 99999874
No 123
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.00 E-value=6.2e-10 Score=110.41 Aligned_cols=132 Identities=20% Similarity=0.304 Sum_probs=86.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcc----eec--------CC--ccc-----ccc---
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETT----MLQ--------TP--KQL-----YQF--- 60 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~----~l~--------~~--~~~-----~~~--- 60 (418)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+|+.....-.+. ... .+ ... ..+
T Consensus 26 ~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (447)
T 2i0z_A 26 HYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFNNE 105 (447)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSCHH
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcCHH
Confidence 37999999999999999999999999999999887765322100000 000 00 000 000
Q ss_pred --------CCCCCCCCC-CCCCC---ChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCC
Q 014821 61 --------SDYPWPDSV-TTDFP---DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPF 128 (418)
Q Consensus 61 --------~~~~~~~~~-~~~~~---~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (418)
...++.... ...|+ ....+.+.|.+.+++.++ +++++++|+++...+
T Consensus 106 ~~~~~~~~~G~~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~GV--~i~~~~~V~~i~~~~------------------- 164 (447)
T 2i0z_A 106 DIITFFENLGVKLKEEDHGRMFPVSNKAQSVVDALLTRLKDLGV--KIRTNTPVETIEYEN------------------- 164 (447)
T ss_dssp HHHHHHHHTTCCEEECGGGEEEETTCCHHHHHHHHHHHHHHTTC--EEECSCCEEEEEEET-------------------
T ss_pred HHHHHHHhcCCceEEeeCCEEECCCCCHHHHHHHHHHHHHHCCC--EEEeCcEEEEEEecC-------------------
Confidence 000110000 01122 356788888888888888 899999999998765
Q ss_pred CCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 129 GSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 129 ~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+..+.|.+.++ .++.||.||+|+|..+
T Consensus 165 --~~v~~V~~~~G-----~~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 165 --GQTKAVILQTG-----EVLETNHVVIAVGGKS 191 (447)
T ss_dssp --TEEEEEEETTC-----CEEECSCEEECCCCSS
T ss_pred --CcEEEEEECCC-----CEEECCEEEECCCCCc
Confidence 22377777654 3699999999999883
No 124
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.98 E-value=3.9e-09 Score=104.26 Aligned_cols=58 Identities=17% Similarity=0.282 Sum_probs=47.6
Q ss_pred hhHHHHHHHHHHHhcCcccceEeee---EEEEEEEcCCCCcccccccccCCCCCCCCCCCceE-EEEecCCCCceeEEEe
Q 014821 76 HNQVLDYIQSYASHFDLRKHIKFNR---KVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVEDAKNHSTEVHQV 151 (418)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~v~~~~---~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~i~~ 151 (418)
...+...+.+.+.+.|+ ++++++ +|+++...+ +.+. |.+.++ .++.|
T Consensus 160 ~~~~~~~L~~~a~~~Gv--~i~~~t~~~~V~~i~~~~----------------------~~v~gV~t~~G-----~~i~A 210 (438)
T 3dje_A 160 ARNALVAAAREAQRMGV--KFVTGTPQGRVVTLIFEN----------------------NDVKGAVTADG-----KIWRA 210 (438)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESTTTTCEEEEEEET----------------------TEEEEEEETTT-----EEEEC
T ss_pred HHHHHHHHHHHHHhcCC--EEEeCCcCceEEEEEecC----------------------CeEEEEEECCC-----CEEEC
Confidence 35777888888888898 899999 999998866 4566 777665 58999
Q ss_pred CEEEEeeccCC
Q 014821 152 DFVILCVGRFS 162 (418)
Q Consensus 152 d~vIlAtG~~~ 162 (418)
|.||+|+|.++
T Consensus 211 d~VV~AtG~~s 221 (438)
T 3dje_A 211 ERTFLCAGASA 221 (438)
T ss_dssp SEEEECCGGGG
T ss_pred CEEEECCCCCh
Confidence 99999999984
No 125
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=98.98 E-value=5.2e-09 Score=105.29 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=86.8
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccc-cc---cCCcceecC-----------------------
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAW-IK---TVETTMLQT----------------------- 53 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~-~~---~~~~~~l~~----------------------- 53 (418)
|+.+||+|||||++|+++|+.|+++|.+|+|+|+.+..+|.. .. ..++.+...
T Consensus 1 M~~~DVvIIGgGi~G~~~A~~La~~G~~V~llE~~~~~~gtS~~s~gli~~g~~~~~~~~~~l~~~~~~~~~~l~~~~~~ 80 (501)
T 2qcu_A 1 METKDLIVIGGGINGAGIAADAAGRGLSVLMLEAQDLACATSSASSKLIHGGLRYLEHYEFRLVSEALAEREVLLKMAPH 80 (501)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSGGGSSCCEECCCGGGGGGTCHHHHHHHHHHHHHHHHHCTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCEEEEECCCCCCCccccccccccccchhhhhchHHHHHHHHHHHHHHHHhCCc
Confidence 788999999999999999999999999999999975332221 11 011111000
Q ss_pred ---------Cccc--------------ccc-CCCCCCCCC-----C--C--------------CCCChhHHHHHHHHHHH
Q 014821 54 ---------PKQL--------------YQF-SDYPWPDSV-----T--T--------------DFPDHNQVLDYIQSYAS 88 (418)
Q Consensus 54 ---------~~~~--------------~~~-~~~~~~~~~-----~--~--------------~~~~~~~~~~~l~~~~~ 88 (418)
+... +.. ....+.... . + .+.....+...+...+.
T Consensus 81 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~P~l~~~~~~~~~~~~g~v~~~~l~~~l~~~a~ 160 (501)
T 2qcu_A 81 IAFPMRFRLPHRPHLRPAWMIRIGLFMYDHLGKRTSLPGSTGLRFGANSVLKPEIKRGFEYSDCWVDDARLVLANAQMVV 160 (501)
T ss_dssp TEEEEEEEEECCTTTSCHHHHHHHHHHHHSSSCCSSSCCCEEEECCTTSSBCTTCCEEEEEEEEEECHHHHHHHHHHHHH
T ss_pred cccccCeEeccCcccchHHHHHHHHHHHHhcCCcEEECHHHHHHhhcCCCcchhceEEEEeeCCEEcHHHHHHHHHHHHH
Confidence 0000 000 000000000 0 0 01134567777777888
Q ss_pred hcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 89 HFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 89 ~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.|. .+.++++|+++..++ +.|.|.+.+..+|...++.+|.||+|+|.++
T Consensus 161 ~~Gv--~i~~~~~V~~l~~~~----------------------~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s 210 (501)
T 2qcu_A 161 RKGG--EVLTRTRATSARREN----------------------GLWIVEAEDIDTGKKYSWQARGLVNATGPWV 210 (501)
T ss_dssp HTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETTTCCEEEEEESCEEECCGGGH
T ss_pred HcCC--EEEcCcEEEEEEEeC----------------------CEEEEEEEECCCCCEEEEECCEEEECCChhH
Confidence 8898 899999999998865 4577887653345556899999999999874
No 126
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.97 E-value=5.7e-09 Score=106.75 Aligned_cols=137 Identities=16% Similarity=0.166 Sum_probs=87.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceec------------CCcc--------------
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQ------------TPKQ-------------- 56 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~------------~~~~-------------- 56 (418)
.+||+|||||++|+++|..|++.|.+|+|||+.+..||.....-.+.... ++..
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNIND 205 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 57999999999999999999999999999999988876533211111000 0000
Q ss_pred ----------------ccccCCCCCC-----CCC--CC------CCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEE
Q 014821 57 ----------------LYQFSDYPWP-----DSV--TT------DFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEF 107 (418)
Q Consensus 57 ----------------~~~~~~~~~~-----~~~--~~------~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 107 (418)
++.-...++. ... .. .......+...|.+.+.+.++ .++++++|+++..
T Consensus 206 ~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 283 (571)
T 1y0p_A 206 PALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKRNI--DLRMNTRGIEVLK 283 (571)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEeeEeEE
Confidence 0000011111 000 00 012346788888888888898 8999999999987
Q ss_pred cCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 108 EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
++ + +..+-|.+.+. ++...++.+|.||+|||.++
T Consensus 284 ~~--~------------------g~v~Gv~~~~~-~g~~~~i~a~~VVlAtGg~~ 317 (571)
T 1y0p_A 284 DD--K------------------GTVKGILVKGM-YKGYYWVKADAVILATGGFA 317 (571)
T ss_dssp CT--T------------------SCEEEEEEEET-TTEEEEEECSEEEECCCCCT
T ss_pred cC--C------------------CeEEEEEEEeC-CCcEEEEECCeEEEeCCCcc
Confidence 54 0 12233555431 24456899999999999874
No 127
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=98.96 E-value=1e-09 Score=106.76 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=83.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC------Ccc--ccc------cCC---cce-ecCCccccccCC--
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI------GGA--WIK------TVE---TTM-LQTPKQLYQFSD-- 62 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~------gg~--~~~------~~~---~~~-l~~~~~~~~~~~-- 62 (418)
++||+|||||++|+++|..|++.|++|+|||+.+.. +.. +.. ... .+. ...+...+.+..
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 379999999999999999999999999999997631 111 100 000 000 000000011100
Q ss_pred ----CCCC---CCCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE
Q 014821 63 ----YPWP---DSVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT 135 (418)
Q Consensus 63 ----~~~~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (418)
..+. ........++..+.+.|.+.+.+.+. .++++++|++++..+ ++.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~--~i~~~~~v~~i~~~~---------------------~~~~~ 138 (394)
T 1k0i_A 82 QRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGA--TTVYQAAEVRLHDLQ---------------------GERPY 138 (394)
T ss_dssp EEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTC--EEESSCEEEEEECTT---------------------SSSCE
T ss_pred ceEEeccccccCCCceEEechHHHHHHHHHHHHhcCC--eEEeceeEEEEEEec---------------------CCceE
Confidence 0000 00011122456777778877777787 899999999998754 23467
Q ss_pred EEE-ecCCCCceeEEEeCEEEEeeccCCC
Q 014821 136 VAV-EDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 136 v~~-~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
|++ .+ |...++.+|.||.|+|..|.
T Consensus 139 v~~~~~---g~~~~~~a~~vV~AdG~~S~ 164 (394)
T 1k0i_A 139 VTFERD---GERLRLDCDYIAGCDGFHGI 164 (394)
T ss_dssp EEEEET---TEEEEEECSEEEECCCTTCS
T ss_pred EEEecC---CcEEEEEeCEEEECCCCCcH
Confidence 776 43 33347999999999998853
No 128
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=98.95 E-value=7e-09 Score=106.18 Aligned_cols=136 Identities=18% Similarity=0.248 Sum_probs=86.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC------CCceEEEeeCCCCCccccc-----------cCCcce-----ec--CCccccc
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK------GFHPIVFEARSDIGGAWIK-----------TVETTM-----LQ--TPKQLYQ 59 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~------~~~v~iie~~~~~gg~~~~-----------~~~~~~-----l~--~~~~~~~ 59 (418)
+||+|||||++|+++|..|++. |++|+|||+.+.+|+.... ..+... +. .....+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~~~~ 115 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTEDRFG 115 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechhhee
Confidence 7999999999999999999998 9999999998877643111 000000 00 0000011
Q ss_pred c-C-----CCC-CCC----CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCC
Q 014821 60 F-S-----DYP-WPD----SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPF 128 (418)
Q Consensus 60 ~-~-----~~~-~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~ 128 (418)
+ . .++ ++. .......++..+.++|.+.+++.++ .++++++|+++..++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv--~i~~g~~v~~l~~~~------------------- 174 (584)
T 2gmh_A 116 ILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGV--EVYPGYAAAEILFHE------------------- 174 (584)
T ss_dssp EECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTC--EEETTCCEEEEEECT-------------------
T ss_pred eeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC-------------------
Confidence 1 0 011 010 0012234677888999999988898 899999999998865
Q ss_pred CCCCce-EEEEec---CCCCce-------eEEEeCEEEEeeccCC
Q 014821 129 GSRGKW-TVAVED---AKNHST-------EVHQVDFVILCVGRFS 162 (418)
Q Consensus 129 ~~~~~~-~v~~~~---~~~~~~-------~~i~~d~vIlAtG~~~ 162 (418)
++.. .|.+.+ ..+|.. .++.+|+||+|+|..|
T Consensus 175 --~g~V~gV~~~~~g~~~~G~~~~~~~~g~~i~Ad~VV~AdG~~S 217 (584)
T 2gmh_A 175 --DGSVKGIATNDVGIQKDGAPKTTFERGLELHAKVTIFAEGCHG 217 (584)
T ss_dssp --TSSEEEEEECCEEECTTSCEEEEEECCCEEECSEEEECCCTTC
T ss_pred --CCCEEEEEeCCccccCCCCcccccCCceEEECCEEEEeeCCCc
Confidence 1222 255542 012321 5799999999999885
No 129
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.95 E-value=5.6e-09 Score=106.42 Aligned_cols=64 Identities=14% Similarity=0.011 Sum_probs=50.5
Q ss_pred hhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEE
Q 014821 76 HNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVI 155 (418)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vI 155 (418)
...+...+...+.+.|. .+.++++|+++...+ +..+.|.+.+..++...++.+|.||
T Consensus 169 ~~~l~~~L~~~a~~~G~--~i~~~~~V~~l~~~~---------------------g~v~gV~~~d~~tg~~~~i~A~~VV 225 (561)
T 3da1_A 169 DARLTLEIMKEAVARGA--VALNYMKVESFIYDQ---------------------GKVVGVVAKDRLTDTTHTIYAKKVV 225 (561)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESEEEEEEEEET---------------------TEEEEEEEEETTTCCEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCC--EEEcCCEEEEEEEcC---------------------CeEEEEEEEEcCCCceEEEECCEEE
Confidence 45566677777788898 899999999999876 2346688877555666789999999
Q ss_pred EeeccCC
Q 014821 156 LCVGRFS 162 (418)
Q Consensus 156 lAtG~~~ 162 (418)
+|+|.++
T Consensus 226 ~AaG~~s 232 (561)
T 3da1_A 226 NAAGPWV 232 (561)
T ss_dssp ECCGGGH
T ss_pred ECCCcch
Confidence 9999874
No 130
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.93 E-value=2.1e-09 Score=103.80 Aligned_cols=58 Identities=12% Similarity=0.195 Sum_probs=46.7
Q ss_pred ChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEE
Q 014821 75 DHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFV 154 (418)
Q Consensus 75 ~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~v 154 (418)
....+...+.+.+.+.|. .++++++|+++...+ +.|.|.+.++ ++.||.|
T Consensus 152 ~~~~~~~~l~~~a~~~Gv--~i~~~~~V~~i~~~~----------------------~~~~V~t~~g------~i~a~~V 201 (381)
T 3nyc_A 152 DTDALHQGYLRGIRRNQG--QVLCNHEALEIRRVD----------------------GAWEVRCDAG------SYRAAVL 201 (381)
T ss_dssp CHHHHHHHHHHHHHHTTC--EEESSCCCCEEEEET----------------------TEEEEECSSE------EEEESEE
T ss_pred CHHHHHHHHHHHHHHCCC--EEEcCCEEEEEEEeC----------------------CeEEEEeCCC------EEEcCEE
Confidence 346777788888888898 899999999999876 4477766543 7999999
Q ss_pred EEeeccCC
Q 014821 155 ILCVGRFS 162 (418)
Q Consensus 155 IlAtG~~~ 162 (418)
|+|+|.++
T Consensus 202 V~A~G~~s 209 (381)
T 3nyc_A 202 VNAAGAWC 209 (381)
T ss_dssp EECCGGGH
T ss_pred EECCChhH
Confidence 99999874
No 131
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.93 E-value=8.7e-09 Score=105.24 Aligned_cols=137 Identities=15% Similarity=0.179 Sum_probs=86.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCccee------------cCCcc--------------
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTML------------QTPKQ-------------- 56 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l------------~~~~~-------------- 56 (418)
.+||+|||||++|+++|..|++.|.+|+|||+.+.+|+.....-.+... .++..
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~~~ 200 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQND 200 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4799999999999999999999999999999998776532221100000 00000
Q ss_pred ----------------ccccCCCCCC-----CCC--------CCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEE
Q 014821 57 ----------------LYQFSDYPWP-----DSV--------TTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEF 107 (418)
Q Consensus 57 ----------------~~~~~~~~~~-----~~~--------~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 107 (418)
++.-...++. ... .........+...|.+.+.+.++ .++++++|+++..
T Consensus 201 ~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv--~i~~~~~v~~l~~ 278 (566)
T 1qo8_A 201 IKLVTILAEQSADGVQWLESLGANLDDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQGI--DTRLNSRVVKLVV 278 (566)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHTTC--CEECSEEEEEEEE
T ss_pred HHHHHHHHhccHHHHHHHHhcCCccccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhcCC--EEEeCCEEEEEEE
Confidence 0000011110 000 00112356788888888888898 8999999999986
Q ss_pred cCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 108 EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
++ ++..+-|.+.+ .++...++.+|.||+|||.++
T Consensus 279 ~~--------------------~g~v~Gv~~~~-~~g~~~~i~A~~VVlAtGg~s 312 (566)
T 1qo8_A 279 ND--------------------DHSVVGAVVHG-KHTGYYMIGAKSVVLATGGYG 312 (566)
T ss_dssp CT--------------------TSBEEEEEEEE-TTTEEEEEEEEEEEECCCCCT
T ss_pred CC--------------------CCcEEEEEEEe-CCCcEEEEEcCEEEEecCCcc
Confidence 53 01123355543 124445799999999999874
No 132
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=98.92 E-value=1.1e-09 Score=111.49 Aligned_cols=169 Identities=15% Similarity=0.107 Sum_probs=102.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC-CCCccccccCCcceecC-----------Cc--------cccccCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS-DIGGAWIKTVETTMLQT-----------PK--------QLYQFSD 62 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~-~~gg~~~~~~~~~~l~~-----------~~--------~~~~~~~ 62 (418)
.+||+|||||++|+++|..|++.|.+|+|||++. .+|.. .+.+...... .. ....|..
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~--~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~ 104 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQM--SCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM 104 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCC--CSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCc--CccccccccchHHHHHHHHHhhhHHHHHhhhcccceee
Confidence 4899999999999999999999999999999974 34421 0111100000 00 0001100
Q ss_pred CCCCCC---C-CCCCCChhHHHHHHHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE
Q 014821 63 YPWPDS---V-TTDFPDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA 137 (418)
Q Consensus 63 ~~~~~~---~-~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 137 (418)
.....+ + ......+..+...+.+.++++ ++ .+ ++++|+++...+ +..+.|.
T Consensus 105 l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GV--eI-~~~~Vt~L~~e~---------------------g~V~GV~ 160 (637)
T 2zxi_A 105 LNTRKGKAVQSPRAQADKKRYREYMKKVCENQENL--YI-KQEEVVDIIVKN---------------------NQVVGVR 160 (637)
T ss_dssp ESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EESCEEEEEESS---------------------SBEEEEE
T ss_pred cccccCccccchhhhCCHHHHHHHHHHHHHhCCCC--EE-EEeEEEEEEecC---------------------CEEEEEE
Confidence 000000 0 001124567888888888874 77 66 678999998765 2234466
Q ss_pred EecCCCCceeEEEeCEEEEeeccCCCCCCCCCCCCCCCCCCCCceEEeccCCCCchhhhhhhhcCCCEEEEEcCCCCHHH
Q 014821 138 VEDAKNHSTEVHQVDFVILCVGRFSDVPNIPEFPPKKGPEAFHGKVIHSMDYSDMDYEAAANLVKGKRVTVVGLQKSALD 217 (418)
Q Consensus 138 ~~~~~~~~~~~i~~d~vIlAtG~~~~~p~~p~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VvG~G~sa~e 217 (418)
+.++ .++.||.||+|||.+ +..+.++ |...+ . ..+ + |+.+|++
T Consensus 161 t~dG-----~~i~AdaVVLATG~~---s~~~~~~---G~~~~---------------------~-~Gr---~-G~~~A~~ 203 (637)
T 2zxi_A 161 TNLG-----VEYKTKAVVVTTGTF---LNGVIYI---GDKMI---------------------P-GGR---L-GEPRSEG 203 (637)
T ss_dssp ETTS-----CEEECSEEEECCTTC---BTCEEEE---TTEEE---------------------E-CSB---T-TBCCBCT
T ss_pred ECCC-----cEEEeCEEEEccCCC---ccCceec---cceec---------------------C-CCC---C-CchhHHH
Confidence 6555 579999999999976 3333333 43321 0 111 2 3678899
Q ss_pred HHHHHhhhcCCCCCeEEEEe
Q 014821 218 IAMECTTANGLENPCTVLYR 237 (418)
Q Consensus 218 ~a~~l~~~~~~~~~V~~~~r 237 (418)
++..|...|.. +..+.+
T Consensus 204 la~~L~~lG~~---v~~l~t 220 (637)
T 2zxi_A 204 LSDFYRRFDFP---LIRFKT 220 (637)
T ss_dssp HHHHHHHTTCC---CEEEEE
T ss_pred HHHHHHhcCCc---eEEecC
Confidence 99999888765 666654
No 133
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.92 E-value=8.3e-09 Score=99.81 Aligned_cols=36 Identities=33% Similarity=0.556 Sum_probs=33.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~g 39 (418)
.+||+|||||++|+++|+.|+++|.+|+|||+.. ++
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~-~~ 40 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRF-IG 40 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS-TT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCC-CC
Confidence 5899999999999999999999999999999974 44
No 134
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.92 E-value=6.6e-09 Score=100.10 Aligned_cols=36 Identities=25% Similarity=0.370 Sum_probs=33.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
++||+|||||++|+++|+.|+++|.+|+|||+....
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~~V~vle~~~~~ 37 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGLNVLMTDAHMPP 37 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTCCEEEECSSCSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 489999999999999999999999999999997644
No 135
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.91 E-value=5.1e-09 Score=101.24 Aligned_cols=36 Identities=19% Similarity=0.329 Sum_probs=33.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
++||+|||||++|+++|+.|+++|.+|+|||+....
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~ 52 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMG 52 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCC
Confidence 479999999999999999999999999999997543
No 136
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.90 E-value=8.9e-09 Score=107.44 Aligned_cols=130 Identities=14% Similarity=0.175 Sum_probs=85.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCc--cccc---cCCcceecC-------------------------
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG--AWIK---TVETTMLQT------------------------- 53 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg--~~~~---~~~~~~l~~------------------------- 53 (418)
+||+|||||++|+++|+.|+++|.+|+|||+++.+|+ ++.. .++......
T Consensus 273 ~DVvIIGgGiaGlsaA~~La~~G~~V~vlEk~~~~g~gaS~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 352 (676)
T 3ps9_A 273 REAAIIGGGIASALLSLALLRRGWQVTLYCADEAPALGASGNRQGALYPLLSKHDEALNRFFSNAFTFARRFYDQLPVKF 352 (676)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSCSTTCCSCEEECCCCCSSCHHHHHHHHHHHHHHHHHHHHCCSCC
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCcccccCccCCCceecCcCCCCccHHHHHHHHHHHHHHHHHHHCCCCc
Confidence 7999999999999999999999999999999765552 1211 111100000
Q ss_pred ---Cccccc-------------cCCCCCCCC-------------------C------CCCCCChhHHHHHHHHHHHhcCc
Q 014821 54 ---PKQLYQ-------------FSDYPWPDS-------------------V------TTDFPDHNQVLDYIQSYASHFDL 92 (418)
Q Consensus 54 ---~~~~~~-------------~~~~~~~~~-------------------~------~~~~~~~~~~~~~l~~~~~~~~~ 92 (418)
....+. +....++.. . .........+...+.+.+.+.|+
T Consensus 353 ~~~~~g~l~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~~~~~l~~~~gg~~~p~~g~v~p~~l~~aL~~~a~~~Gv 432 (676)
T 3ps9_A 353 DHDWCGVTQLGWDEKSQHKIAQMLSMDLPAELAVAVEANAVEQITGVATNCSGITYPQGGWLCPAELTRNVLELAQQQGL 432 (676)
T ss_dssp CEECCCEEEECCSHHHHHHHHHHHTSCCCTTTCEEECHHHHHHHHSSCCSSCEEEETTCEEECHHHHHHHHHHHHHHTTC
T ss_pred CcCcCCeeeecCCHHHHHHHHHHHhcCCcHHHhhhCCHHHHHHhhCCCccCCcEEecCCeeeCHHHHHHHHHHHHHhCCC
Confidence 000000 000001100 0 01112345677778888888898
Q ss_pred ccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 93 RKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 93 ~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
.++++++|+++...+ +.|.|.+.++ .++.+|.||+|+|.++
T Consensus 433 --~i~~~t~V~~l~~~~----------------------~~v~V~t~~G-----~~i~Ad~VVlAtG~~s 473 (676)
T 3ps9_A 433 --QIYYQYQLQNFSRKD----------------------DCWLLNFAGD-----QQATHSVVVLANGHQI 473 (676)
T ss_dssp --EEEESCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECCGGGG
T ss_pred --EEEeCCeeeEEEEeC----------------------CeEEEEECCC-----CEEECCEEEECCCcch
Confidence 899999999999876 4577777655 3699999999999874
No 137
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.87 E-value=1.9e-08 Score=105.21 Aligned_cols=58 Identities=10% Similarity=0.234 Sum_probs=46.6
Q ss_pred hhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCcee-EEEeCEE
Q 014821 76 HNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTE-VHQVDFV 154 (418)
Q Consensus 76 ~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~i~~d~v 154 (418)
...+...+.+.+.+.|+ .++++++|+++...+ +.|.|.+.++ . ++.+|.|
T Consensus 411 p~~l~~aL~~~a~~~Gv--~i~~~t~V~~l~~~~----------------------~~v~V~t~~G-----~~~i~Ad~V 461 (689)
T 3pvc_A 411 PSDLTHALMMLAQQNGM--TCHYQHELQRLKRID----------------------SQWQLTFGQS-----QAAKHHATV 461 (689)
T ss_dssp HHHHHHHHHHHHHHTTC--EEEESCCEEEEEECS----------------------SSEEEEEC-C-----CCCEEESEE
T ss_pred HHHHHHHHHHHHHhCCC--EEEeCCeEeEEEEeC----------------------CeEEEEeCCC-----cEEEECCEE
Confidence 45677778888888898 899999999999876 4587777654 3 6899999
Q ss_pred EEeeccCC
Q 014821 155 ILCVGRFS 162 (418)
Q Consensus 155 IlAtG~~~ 162 (418)
|+|+|.++
T Consensus 462 VlAtG~~s 469 (689)
T 3pvc_A 462 ILATGHRL 469 (689)
T ss_dssp EECCGGGT
T ss_pred EECCCcch
Confidence 99999974
No 138
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.86 E-value=2e-09 Score=107.44 Aligned_cols=35 Identities=34% Similarity=0.430 Sum_probs=32.0
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCc
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg 40 (418)
||+|||||++|+++|..|++.|.+|+|+|+. ..+|
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~V~viek~-~~~g 35 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKKVTLISKR-IDGG 35 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECSS-TTCS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCCEEEEeCC-CCCc
Confidence 7999999999999999999999999999998 4444
No 139
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.86 E-value=1.8e-08 Score=97.99 Aligned_cols=38 Identities=24% Similarity=0.392 Sum_probs=33.4
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
|. .+||+|||||++|+++|+.|+++|.+|+|||+....
T Consensus 1 M~~~~DVvIIGaG~~Gl~~A~~La~~G~~V~vlE~~~~~ 39 (397)
T 2oln_A 1 MTESYDVVVVGGGPVGLATAWQVAERGHRVLVLERHTFF 39 (397)
T ss_dssp --CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCTT
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 54 489999999999999999999999999999997644
No 140
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.85 E-value=1.4e-08 Score=99.02 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=33.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHh-CC-CceEEEeeCCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL-KG-FHPIVFEARSDIG 39 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~-~~-~~v~iie~~~~~g 39 (418)
.+||+|||||++|+++|..|++ +| .+|+|||++. ++
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~V~vlE~~~-~~ 58 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITNVAVLEKGW-LA 58 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCCEEEECSSS-TT
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCcEEEEeCCC-CC
Confidence 5799999999999999999999 99 9999999977 44
No 141
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.84 E-value=6.5e-09 Score=101.30 Aligned_cols=35 Identities=26% Similarity=0.458 Sum_probs=32.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
++|+|||||++||++|..|+++|++|+|||+.+.+
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~ 36 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAA 36 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSS
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCC
Confidence 57999999999999999999999999999997654
No 142
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.83 E-value=1.2e-08 Score=98.80 Aligned_cols=38 Identities=24% Similarity=0.325 Sum_probs=34.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~g 39 (418)
.++||+|||||++|+++|+.|+++|.+|+|||+....+
T Consensus 2 ~~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~ 39 (389)
T 2gf3_A 2 THFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPH 39 (389)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCC
Confidence 35899999999999999999999999999999976443
No 143
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.81 E-value=5.5e-08 Score=98.03 Aligned_cols=39 Identities=28% Similarity=0.456 Sum_probs=36.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGA 41 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~ 41 (418)
.+||+|||+|++|+++|..|+++|.+|+|||+.+..||.
T Consensus 41 ~~DVvVVGaG~AGl~AA~~aa~~G~~V~vlEk~~~~GG~ 79 (510)
T 4at0_A 41 EADVVVAGYGIAGVAASIEAARAGADVLVLERTSGWGGA 79 (510)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCc
Confidence 479999999999999999999999999999999877653
No 144
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=98.79 E-value=5.9e-09 Score=89.82 Aligned_cols=73 Identities=5% Similarity=-0.044 Sum_probs=46.9
Q ss_pred hhhccCcEEEeccCceeEecC----cEEEcCCceeeeccEEEEccCCCCCcchhccccchhhhhhhcCCCCCCccceeee
Q 014821 332 DKVEEGSIILKKSQDFSFCED----GIVVDGQTTPLKTDLVILATGFKGDVKLKNIFLSQTFQDYLAGSPTEKLPLYRSA 407 (418)
Q Consensus 332 ~~~~~~~v~~~~~~v~~~~~~----~v~~~~g~~~~~~D~Vi~atG~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 407 (418)
+.+++.+++++.+.+..++.+ .+.+++| + +++|.||+|||..++ +.+.++.++ + .+.+.++..+
T Consensus 64 ~~~~~~gv~v~~~~v~~i~~~~~~~~v~~~~g-~-i~ad~vI~A~G~~~~--~~~~~g~~~-------~-~g~i~vd~~~ 131 (180)
T 2ywl_A 64 AHARRYGAEVRPGVVKGVRDMGGVFEVETEEG-V-EKAERLLLCTHKDPT--LPSLLGLTR-------R-GAYIDTDEGG 131 (180)
T ss_dssp HHHHHTTCEEEECCCCEEEECSSSEEEECSSC-E-EEEEEEEECCTTCCH--HHHHHTCCE-------E-TTEECCCTTC
T ss_pred HHHHHcCCEEEeCEEEEEEEcCCEEEEEECCC-E-EEECEEEECCCCCCC--ccccCCCCc-------c-CceEEeCCCC
Confidence 344455577777666666542 2566777 6 999999999999974 222222221 2 4556666666
Q ss_pred eeccCcccc
Q 014821 408 HIYIDTLTY 416 (418)
Q Consensus 408 ~~~~~~~~~ 416 (418)
.++.|+||.
T Consensus 132 ~t~~~~i~a 140 (180)
T 2ywl_A 132 RTSYPRVYA 140 (180)
T ss_dssp BCSSTTEEE
T ss_pred CcCCCCEEE
Confidence 668899885
No 145
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=98.79 E-value=9.2e-09 Score=97.25 Aligned_cols=105 Identities=20% Similarity=0.253 Sum_probs=63.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCc-cccc--cCCcceecCCc-cccccCCCCCCCCCC-CCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGG-AWIK--TVETTMLQTPK-QLYQFSDYPWPDSVT-TDFPD 75 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg-~~~~--~~~~~~l~~~~-~~~~~~~~~~~~~~~-~~~~~ 75 (418)
.+||+|||||++|+++|..|+++ |.+|+|||+...+|+ .|.. .+....+..+. .++.-...++..... .....
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~G~~~~~~~ 158 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVPYEDEGDYVVVKH 158 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCCCEECSSEEEESC
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCcccccCCeEEEec
Confidence 47999999999999999999997 999999999887764 3433 22222221111 000001111111000 00112
Q ss_pred hhHHHHHHHHHHHh-cCcccceEeeeEEEEEEEcC
Q 014821 76 HNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEG 109 (418)
Q Consensus 76 ~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~ 109 (418)
..++...|...+.+ .++ .+++++.|+++...+
T Consensus 159 ~~d~~~~L~~~a~~~~gV--~i~~~~~V~dLi~~~ 191 (344)
T 3jsk_A 159 AALFTSTVLSKVLQRPNV--KLFNATTVEDLITRK 191 (344)
T ss_dssp HHHHHHHHHHHHHTCTTE--EEEETEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHhCCCC--EEEeCCEEEEEEecC
Confidence 34556666666666 477 788999999987654
No 146
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=98.78 E-value=4e-08 Score=101.73 Aligned_cols=142 Identities=18% Similarity=0.214 Sum_probs=88.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHh-CCCceEEEeeCCCCCccccc------------cC-------------CcceecCC--
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDIGGAWIK------------TV-------------ETTMLQTP-- 54 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie~~~~~gg~~~~------------~~-------------~~~~l~~~-- 54 (418)
.+||+|||||++||++|..|++ .|++|+|||+.+.++...+. .. ....+..+
T Consensus 32 ~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~~ 111 (639)
T 2dkh_A 32 QVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPDP 111 (639)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEECT
T ss_pred CCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCCC
Confidence 4799999999999999999999 99999999998755321110 00 00000000
Q ss_pred ---ccccccCCCCCC-CC---CCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCC
Q 014821 55 ---KQLYQFSDYPWP-DS---VTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQP 127 (418)
Q Consensus 55 ---~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~ 127 (418)
........++.. .. ......++..+.++|.+.+.+++....++++++|++++.++ +.
T Consensus 112 ~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~--~~-------------- 175 (639)
T 2dkh_A 112 GQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDH--GA-------------- 175 (639)
T ss_dssp TSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECT--TC--------------
T ss_pred CCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECC--CC--------------
Confidence 000000000000 00 01122467788899999998886322688999999998764 00
Q ss_pred CCCCCceEEEEecC---CCCceeEEEeCEEEEeeccCC
Q 014821 128 FGSRGKWTVAVEDA---KNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 128 ~~~~~~~~v~~~~~---~~~~~~~i~~d~vIlAtG~~~ 162 (418)
....++|++.+. .+|...++.+|+||.|+|..|
T Consensus 176 --~~~~v~v~~~~~~~~~~G~~~~i~a~~vVgADG~~S 211 (639)
T 2dkh_A 176 --ADYPVTVTLERCDAAHAGQIETVQARYVVGCDGARS 211 (639)
T ss_dssp --SSCCEEEEEEECSGGGTTCEEEEEEEEEEECCCTTC
T ss_pred --CcCCEEEEEEeccccCCCCeEEEEeCEEEECCCcch
Confidence 012467776641 124556899999999999986
No 147
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.76 E-value=1e-07 Score=97.34 Aligned_cols=137 Identities=19% Similarity=0.162 Sum_probs=86.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCccee------------cCCccc-------------
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTML------------QTPKQL------------- 57 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l------------~~~~~~------------- 57 (418)
.+||+|||+|++|+++|..|++.|.+|+|||+.+.+|+.....-.+... .++...
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~~ 205 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIND 205 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCCC
Confidence 4699999999999999999999999999999998877643321111100 000000
Q ss_pred -----------------cccCCCCCC-----CCC--C------CCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEE
Q 014821 58 -----------------YQFSDYPWP-----DSV--T------TDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEF 107 (418)
Q Consensus 58 -----------------~~~~~~~~~-----~~~--~------~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~ 107 (418)
+.-...++. ... . ........+...|.+.+.+.++ +++++++|+++..
T Consensus 206 ~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv--~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 206 PELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKRGT--DIRLNSRVVRILE 283 (572)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHTTC--EEESSEEEEEEEE
T ss_pred HHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHcCC--eEEecCEEEEEEE
Confidence 000011111 000 0 0011255788888888888898 8999999999976
Q ss_pred cCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 108 EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
++ .+..+-|.+.+ .++...++.+|.||+|||.++
T Consensus 284 ~~--------------------~g~v~GV~~~~-~~G~~~~i~A~~VVlAtGg~~ 317 (572)
T 1d4d_A 284 DA--------------------SGKVTGVLVKG-EYTGYYVIKADAVVIAAGGFA 317 (572)
T ss_dssp C----------------------CCEEEEEEEE-TTTEEEEEECSEEEECCCCCT
T ss_pred CC--------------------CCeEEEEEEEe-CCCcEEEEEcCEEEEeCCCCc
Confidence 43 01223355543 124456799999999999774
No 148
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=98.74 E-value=7.3e-08 Score=100.11 Aligned_cols=105 Identities=16% Similarity=0.175 Sum_probs=64.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHh-----CCCceEEEeeCCCCCcc------ccc------c-------------CCcceec
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL-----KGFHPIVFEARSDIGGA------WIK------T-------------VETTMLQ 52 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~-----~~~~v~iie~~~~~gg~------~~~------~-------------~~~~~l~ 52 (418)
.+||+|||||++||++|..|++ .|++++|||+.+..... +.. . .....+.
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 4799999999999999999999 99999999997643210 000 0 0000000
Q ss_pred CCc---ccc---ccCCCCCC-CCCCCCCCChhHHHHHHHHHHHhcC---cccceEeeeEEEEEEEcC
Q 014821 53 TPK---QLY---QFSDYPWP-DSVTTDFPDHNQVLDYIQSYASHFD---LRKHIKFNRKVVGIEFEG 109 (418)
Q Consensus 53 ~~~---~~~---~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~---~~~~v~~~~~v~~i~~~~ 109 (418)
.+. ... .+.+.... ........++..+.++|.+.+.+++ + .+.+++++++++.++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v--~v~~g~~v~~~~~d~ 152 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRI--KVERPLIPEKMEIDS 152 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSS--CEECSEEEEEEEECG
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCce--EEEeCCEEEEEEecC
Confidence 000 000 00000000 0001122467788889988888876 6 799999999998754
No 149
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.74 E-value=7.5e-08 Score=94.67 Aligned_cols=40 Identities=30% Similarity=0.444 Sum_probs=37.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccc
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~ 43 (418)
+||+|||||++|+++|+.|++.|.+|+|||+++.+||...
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~GG~~~ 41 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLGGRAY 41 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCccCeec
Confidence 7999999999999999999999999999999888888654
No 150
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=98.71 E-value=4.2e-08 Score=100.10 Aligned_cols=128 Identities=20% Similarity=0.274 Sum_probs=79.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC-CCCccccccCCcceec----------C-Cc--------cccccC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS-DIGGAWIKTVETTMLQ----------T-PK--------QLYQFS 61 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~-~~gg~~~~~~~~~~l~----------~-~~--------~~~~~~ 61 (418)
..+||+|||||++|+++|..|++.|.+|+|+|++. .+|+.+.. +..... . .. ....|.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~--ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~ 97 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCN--PAIGGVAKGQITREIDALGGEMGKAIDATGIQFR 97 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSC--SEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEE
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccc--cchhhhhHHHHHHHHHhcccHHHHHHHhcCCchh
Confidence 35899999999999999999999999999999974 34442211 110000 0 00 000110
Q ss_pred CCC---CCCCC-CCCCCChhHHHHHHHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE-
Q 014821 62 DYP---WPDSV-TTDFPDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT- 135 (418)
Q Consensus 62 ~~~---~~~~~-~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (418)
... .+..+ ......+..+...+.+.++++ ++ .+ ++++|+++..++ +...
T Consensus 98 ~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV--~I-~~~~V~~L~~d~----------------------g~V~G 152 (641)
T 3cp8_A 98 MLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNI--DL-LQDTVIGVSANS----------------------GKFSS 152 (641)
T ss_dssp EECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTE--EE-EECCEEEEEEET----------------------TEEEE
T ss_pred hcccccCccccchhhhcCHHHHHHHHHHHHHhCCCC--EE-EeeEEEEEEecC----------------------CEEEE
Confidence 000 00000 001234557888888888875 77 56 567899987755 2232
Q ss_pred EEEecCCCCceeEEEeCEEEEeeccC
Q 014821 136 VAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 136 v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
|.+.++ .++.||.||+|||.+
T Consensus 153 V~t~~G-----~~i~Ad~VVLATG~~ 173 (641)
T 3cp8_A 153 VTVRSG-----RAIQAKAAILACGTF 173 (641)
T ss_dssp EEETTS-----CEEEEEEEEECCTTC
T ss_pred EEECCC-----cEEEeCEEEECcCCC
Confidence 555544 489999999999976
No 151
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.70 E-value=1.6e-07 Score=96.16 Aligned_cols=36 Identities=17% Similarity=0.192 Sum_probs=33.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
.+||+|||||++|+++|..|++.|.+|+|||+....
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~~V~vlEK~~~~ 42 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQTCALLSKVFPT 42 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCC
Confidence 479999999999999999999999999999998654
No 152
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.69 E-value=1.4e-08 Score=92.42 Aligned_cols=43 Identities=33% Similarity=0.529 Sum_probs=39.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
|+ +||+||||||+||++|..|+++|++|+|||+++.+||.+..
T Consensus 1 Mt-~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~~~~ 43 (336)
T 3kkj_A 1 MT-VPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSS 43 (336)
T ss_dssp -C-CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred CC-CCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccc
Confidence 54 89999999999999999999999999999999999987665
No 153
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=98.69 E-value=7.1e-08 Score=97.84 Aligned_cols=35 Identities=31% Similarity=0.524 Sum_probs=32.5
Q ss_pred CCccEEEEcCCHHHHHHHHHHHh---CCCceEEEeeCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLL---KGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~---~~~~v~iie~~~ 36 (418)
..+||+|||||++|+++|..|++ .|++|+|||+..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~ 41 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAA 41 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCC
Confidence 36899999999999999999999 999999999954
No 154
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.69 E-value=1.2e-07 Score=97.44 Aligned_cols=36 Identities=28% Similarity=0.262 Sum_probs=33.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
.+||+|||||.+|+++|..|++.|.+|+|||+....
T Consensus 18 ~~DVvVVG~G~AGl~AAl~aa~~G~~V~vlEK~~~~ 53 (621)
T 2h88_A 18 EFDAVVVGAGGAGLRAAFGLSEAGFNTACVTKLFPT 53 (621)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCGG
T ss_pred cCCEEEECccHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 479999999999999999999999999999997643
No 155
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=98.67 E-value=1.6e-07 Score=95.83 Aligned_cols=36 Identities=17% Similarity=0.260 Sum_probs=33.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
.+||+|||||++|+++|..|+++|.+|+|||+.+..
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~~V~LlE~~~~~ 67 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGIKTGLIEMQDFA 67 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTT
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCC
Confidence 589999999999999999999999999999997643
No 156
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=98.67 E-value=3.7e-08 Score=96.64 Aligned_cols=41 Identities=39% Similarity=0.651 Sum_probs=37.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
+||+|||||++||++|..|+++|.+|+|+|+++.+||....
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~~ 41 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGHEIIVLEKSAMIGGRFTN 41 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTSSE
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCceeEE
Confidence 48999999999999999999999999999999988875443
No 157
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=98.66 E-value=3.5e-08 Score=97.97 Aligned_cols=39 Identities=33% Similarity=0.606 Sum_probs=36.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC------CceEEEeeCCCCCcc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG------FHPIVFEARSDIGGA 41 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~------~~v~iie~~~~~gg~ 41 (418)
++||+|||||++||++|..|++.| ++|+|+|+++.+||.
T Consensus 5 ~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG~ 49 (470)
T 3i6d_A 5 KKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGGK 49 (470)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCTT
T ss_pred CCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCce
Confidence 479999999999999999999999 999999999888874
No 158
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.64 E-value=1.3e-07 Score=100.84 Aligned_cols=36 Identities=25% Similarity=0.447 Sum_probs=33.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSD 37 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~~ 37 (418)
+.+||+|||||++|+++|+.|+++|. +|+|||++..
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~ 39 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPL 39 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCT
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCC
Confidence 36899999999999999999999998 9999999764
No 159
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.64 E-value=2.3e-07 Score=95.14 Aligned_cols=36 Identities=25% Similarity=0.246 Sum_probs=33.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC--CceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~--~~v~iie~~~~~ 38 (418)
.+||+|||||++|+++|..|++.| .+|+|||+....
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~~V~vlEk~~~~ 42 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNAKIALISKVYPM 42 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTCCEEEEESSCGG
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCCcEEEEeCCCCC
Confidence 479999999999999999999999 999999997643
No 160
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=98.63 E-value=3.6e-08 Score=96.32 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~ 37 (418)
.+||+|||||++|+++|+.|+++ |++|+|||+...
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~ 72 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGL 72 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCS
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence 37999999999999999999999 999999999753
No 161
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.63 E-value=3.1e-07 Score=95.02 Aligned_cols=36 Identities=25% Similarity=0.296 Sum_probs=33.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
.+||+|||||.+|+++|..|++.|.+|+|||+....
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~~V~vlEK~~~~ 40 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGLSTIVLSLIPVK 40 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTCCEEEECSSCGG
T ss_pred cccEEEECchHHHHHHHHHHHHCCCcEEEEeccCCC
Confidence 579999999999999999999999999999997644
No 162
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=98.61 E-value=1e-07 Score=94.25 Aligned_cols=38 Identities=34% Similarity=0.411 Sum_probs=34.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDI 38 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~~~ 38 (418)
|+++||+|||||++|+++|..|+++| .+|+|||+...+
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~~V~vlE~~~~~ 59 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGGSVLVVDAGHAP 59 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCSCEEEEESSSST
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCCcEEEEccCCCC
Confidence 66789999999999999999999999 999999994333
No 163
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.60 E-value=1.4e-07 Score=95.58 Aligned_cols=37 Identities=24% Similarity=0.313 Sum_probs=33.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg 40 (418)
.+||+|||||++|+++|..|++ |.+|+|||+....++
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~~V~vlEk~~~~~g 44 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QHQVIVLSKGPVTEG 44 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TSCEEEECSSCTTC-
T ss_pred CCCEEEECccHHHHHHHHHHhc-CCcEEEEECCCCCCC
Confidence 4799999999999999999999 999999999876543
No 164
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=98.60 E-value=2e-07 Score=94.72 Aligned_cols=61 Identities=16% Similarity=0.257 Sum_probs=46.7
Q ss_pred CChhHHHHHHHHHHHhc-CcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeC
Q 014821 74 PDHNQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVD 152 (418)
Q Consensus 74 ~~~~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d 152 (418)
..+..+.++|.+.+.+. |+ .+.++ +|++++..+ .+..+.|.+.++ .++.+|
T Consensus 191 ~~~~~l~~~L~~~~~~~~Gv--~i~~~-~V~~i~~~~--------------------~g~~~~v~~~~G-----~~i~ad 242 (550)
T 2e4g_A 191 FDAHLVADFLRRFATEKLGV--RHVED-RVEHVQRDA--------------------NGNIESVRTATG-----RVFDAD 242 (550)
T ss_dssp ECHHHHHHHHHHHHHHHSCC--EEEEC-CEEEEEECT--------------------TSCEEEEEETTS-----CEEECS
T ss_pred EcHHHHHHHHHHHHHhcCCc--EEEEC-eEeEEEEcC--------------------CCCEEEEEECCC-----CEEECC
Confidence 45678889999999888 88 88898 999998754 011244555544 479999
Q ss_pred EEEEeeccCC
Q 014821 153 FVILCVGRFS 162 (418)
Q Consensus 153 ~vIlAtG~~~ 162 (418)
.||+|+|..|
T Consensus 243 ~vI~A~G~~S 252 (550)
T 2e4g_A 243 LFVDCSGFRG 252 (550)
T ss_dssp EEEECCGGGC
T ss_pred EEEECCCCch
Confidence 9999999875
No 165
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=98.60 E-value=3.6e-07 Score=85.82 Aligned_cols=104 Identities=18% Similarity=0.286 Sum_probs=64.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCc-cccc--cCCcceecCCc-cccccCCCCCCCC-CCCCCCCh
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGG-AWIK--TVETTMLQTPK-QLYQFSDYPWPDS-VTTDFPDH 76 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg-~~~~--~~~~~~l~~~~-~~~~~~~~~~~~~-~~~~~~~~ 76 (418)
+||+|||||++|+++|..|++. |.+|+|+|+++.+|+ .|.. .+....+.... .++.-...++... ........
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~~~~~~~~~~~~L~~~Gv~~~~~g~~~~~~~~ 145 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFSAMVMRKPAHLFLQELEIPYEDEGDYVVVKHA 145 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCCCEEEETTTHHHHHHTTCCCEECSSEEEESCH
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccchhhhhhHHHHHHHhhCcccccCCCeEEEcch
Confidence 5999999999999999999998 999999999988874 4432 22222222111 0111111111110 00001134
Q ss_pred hHHHHHHHHHHHhc-CcccceEeeeEEEEEEEcC
Q 014821 77 NQVLDYIQSYASHF-DLRKHIKFNRKVVGIEFEG 109 (418)
Q Consensus 77 ~~~~~~l~~~~~~~-~~~~~v~~~~~v~~i~~~~ 109 (418)
.++...+.+.+.+. ++ .++.+++|+++..+.
T Consensus 146 ~~~~~~L~~~a~~~~GV--~i~~~~~V~~Ll~~~ 177 (326)
T 2gjc_A 146 ALFISTVLSKVLQLPNV--KLFNATCVEDLVTRP 177 (326)
T ss_dssp HHHHHHHHHHHHTSTTE--EEETTEEEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCc--EEEecceeeeeeecc
Confidence 56677777766664 77 788889999998753
No 166
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=98.59 E-value=3.5e-07 Score=89.59 Aligned_cols=40 Identities=33% Similarity=0.519 Sum_probs=36.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccc
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~ 43 (418)
+||+|||||.+||++|..|+++|.+|+|||+++.+||...
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~~V~vlE~~~~~GG~~~ 40 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGHEVEVFERLPITGGRFT 40 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCceEEEeCCCCCCCcee
Confidence 5899999999999999999999999999999998887543
No 167
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=98.57 E-value=3.9e-07 Score=92.14 Aligned_cols=61 Identities=11% Similarity=0.094 Sum_probs=45.3
Q ss_pred ChhHHHHHHHHHHHh-cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCC-ceEEEEecCCCCceeEEEeC
Q 014821 75 DHNQVLDYIQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG-KWTVAVEDAKNHSTEVHQVD 152 (418)
Q Consensus 75 ~~~~~~~~l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~i~~d 152 (418)
.+..+..+|.+.+.+ .|+ .++++ +|++++..+ ++ ...|.+.++ .++.+|
T Consensus 173 ~r~~l~~~L~~~a~~~~Gv--~i~~~-~v~~i~~~~---------------------~g~~~~v~~~~g-----~~i~ad 223 (526)
T 2pyx_A 173 NAAKFSQLLTEHCTQKLGV--THIRD-HVSQIINNQ---------------------HGDIEKLITKQN-----GEISGQ 223 (526)
T ss_dssp CHHHHHHHHHHHHHHTSCC--EEEEC-CEEEEEECT---------------------TSCEEEEEESSS-----CEEECS
T ss_pred cHHHHHHHHHHHHHhcCCC--EEEEe-EEEEEEecC---------------------CCcEEEEEECCC-----CEEEcC
Confidence 567888899999888 788 78887 699998764 11 234555443 259999
Q ss_pred EEEEeeccCCCC
Q 014821 153 FVILCVGRFSDV 164 (418)
Q Consensus 153 ~vIlAtG~~~~~ 164 (418)
.||.|+|..|..
T Consensus 224 ~vV~AdG~~S~~ 235 (526)
T 2pyx_A 224 LFIDCTGAKSLL 235 (526)
T ss_dssp EEEECSGGGCCC
T ss_pred EEEECCCcchHH
Confidence 999999998533
No 168
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.57 E-value=4.4e-07 Score=90.23 Aligned_cols=101 Identities=22% Similarity=0.262 Sum_probs=78.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++.+.+
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~l 216 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILP-------------------------------Q--GDPETAALL 216 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T--SCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCcccc-------------------------------c--cCHHHHHHH
Confidence 6899999999999999999999999999999763310 0 124677788
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+++.++ ++.++++|.+++... +...|.+.+..+|...++.||.||+|+|..
T Consensus 217 ~~~l~~~gV--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~ 270 (464)
T 2eq6_A 217 RRALEKEGI--RVRTKTKAVGYEKKK----------------------DGLHVRLEPAEGGEGEEVVVDKVLVAVGRK 270 (464)
T ss_dssp HHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETTCCSCEEEEESEEEECSCEE
T ss_pred HHHHHhcCC--EEEcCCEEEEEEEeC----------------------CEEEEEEeecCCCceeEEEcCEEEECCCcc
Confidence 888888899 899999999998765 345566552111333589999999999965
No 169
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.57 E-value=4.4e-07 Score=90.57 Aligned_cols=102 Identities=25% Similarity=0.369 Sum_probs=79.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+... ...++.++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~---------------------------------~~~~~~~~ 229 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS---------------------------------MDGEVAKA 229 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS---------------------------------SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc---------------------------------cCHHHHHH
Confidence 368999999999999999999999999999997633210 11467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEE--cCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEF--EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+.+..++.++ ++.++++|.+++. .. +...+.+.+..++...++.||.||+|+|.
T Consensus 230 l~~~l~~~gv--~i~~~~~v~~i~~~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~ 285 (478)
T 1v59_A 230 TQKFLKKQGL--DFKLSTKVISAKRNDDK----------------------NVVEIVVEDTKTNKQENLEAEVLLVAVGR 285 (478)
T ss_dssp HHHHHHHTTC--EEECSEEEEEEEEETTT----------------------TEEEEEEEETTTTEEEEEEESEEEECSCE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEecCC----------------------CeEEEEEEEcCCCCceEEECCEEEECCCC
Confidence 8888888899 8999999999987 33 34556665322234468999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 286 ~ 286 (478)
T 1v59_A 286 R 286 (478)
T ss_dssp E
T ss_pred C
Confidence 5
No 170
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.56 E-value=2.8e-07 Score=91.46 Aligned_cols=96 Identities=27% Similarity=0.252 Sum_probs=76.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||||++|+.+|..|++.|.+|+++++.+.+. +. ...++.+.+
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l-------------------------------~~--~~~~~~~~l 214 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRIL-------------------------------PT--MDLEVSRAA 214 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999975321 00 114667777
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+++.++ +++++++|++++... +.+.+.+.++ .++.||.||+|+|..
T Consensus 215 ~~~l~~~Gv--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~i~~D~vv~A~G~~ 263 (455)
T 2yqu_A 215 ERVFKKQGL--TIRTGVRVTAVVPEA----------------------KGARVELEGG-----EVLEADRVLVAVGRR 263 (455)
T ss_dssp HHHHHHHTC--EEECSCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEECCEEEEEEEeC----------------------CEEEEEECCC-----eEEEcCEEEECcCCC
Confidence 888888898 899999999998765 3455555444 579999999999965
No 171
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.54 E-value=5.3e-07 Score=89.49 Aligned_cols=134 Identities=17% Similarity=0.070 Sum_probs=75.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCC-------CCCC--C
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWP-------DSVT--T 71 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~-------~~~~--~ 71 (418)
.++|+|||+|.+|+.+|..|++. +.+|+++++.+.+-..-...+ ...+..|...-.|...+.. .... .
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~-~~~~~~p~~~~~~~~l~~~~~~~~~~~~~~~~~ 305 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPF-VNEVFAPKFTDLIYSREHAERERLLREYHNTNY 305 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHH-HHGGGSHHHHHHHHHSCHHHHHHHHHHTGGGTS
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCcc-chhccChhHHHHHhcCCHHHHHHHHHHhhccCC
Confidence 46899999999999999999998 889999999764311000000 0000000000000000000 0000 0
Q ss_pred CCCChhHHH----HHHHH-HHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCce
Q 014821 72 DFPDHNQVL----DYIQS-YASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHST 146 (418)
Q Consensus 72 ~~~~~~~~~----~~l~~-~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 146 (418)
.-.....+. ...++ .....++ .+.++++|++++..+ +.+.|.+.+..+|..
T Consensus 306 ~~~~~~~~~~~~~~l~~~~~~~~~~v--~i~~~~~v~~v~~~~----------------------~~~~v~~~~~~~g~~ 361 (463)
T 3s5w_A 306 SVVDTDLIERIYGVFYRQKVSGIPRH--AFRCMTTVERATATA----------------------QGIELALRDAGSGEL 361 (463)
T ss_dssp SCBCHHHHHHHHHHHHHHHHHCCCCS--EEETTEEEEEEEEET----------------------TEEEEEEEETTTCCE
T ss_pred CcCCHHHHHHHHHHHHHHHhcCCCCe--EEEeCCEEEEEEecC----------------------CEEEEEEEEcCCCCe
Confidence 000111111 11111 1111466 788999999998766 568898887656777
Q ss_pred eEEEeCEEEEeeccC
Q 014821 147 EVHQVDFVILCVGRF 161 (418)
Q Consensus 147 ~~i~~d~vIlAtG~~ 161 (418)
.++.+|.||+|||..
T Consensus 362 ~~~~~D~Vv~AtG~~ 376 (463)
T 3s5w_A 362 SVETYDAVILATGYE 376 (463)
T ss_dssp EEEEESEEEECCCEE
T ss_pred EEEECCEEEEeeCCC
Confidence 789999999999965
No 172
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.54 E-value=5.6e-07 Score=87.17 Aligned_cols=98 Identities=18% Similarity=0.257 Sum_probs=78.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .+ ...++.+.
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~-------------------------------~~-~~~~~~~~ 192 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMP-------------------------------GL-LHPAAAKA 192 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------TT-SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhh-------------------------------cc-cCHHHHHH
Confidence 47899999999999999999999999999999753311 00 12467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ .++++++|.+++... +.+.|.+.++ .++.||.||+|+|..
T Consensus 193 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~g-----~~i~~d~vv~a~G~~ 242 (384)
T 2v3a_A 193 VQAGLEGLGV--RFHLGPVLASLKKAG----------------------EGLEAHLSDG-----EVIPCDLVVSAVGLR 242 (384)
T ss_dssp HHHHHHTTTC--EEEESCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEecC----------------------CEEEEEECCC-----CEEECCEEEECcCCC
Confidence 8888888898 899999999998765 3456666555 579999999999965
No 173
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=98.53 E-value=2.7e-08 Score=96.40 Aligned_cols=101 Identities=13% Similarity=0.118 Sum_probs=61.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCCCC---CccccccCCcce------ec---------CCccccccC--
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARSDI---GGAWIKTVETTM------LQ---------TPKQLYQFS-- 61 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~~~---gg~~~~~~~~~~------l~---------~~~~~~~~~-- 61 (418)
+||+|||||++|+++|..|+++ |++|+|||+++.+ |........... +. .+...+.+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHH 80 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeC
Confidence 4899999999999999999998 9999999998765 322111000000 00 000001110
Q ss_pred CCCCCC--CCCCCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEE
Q 014821 62 DYPWPD--SVTTDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIE 106 (418)
Q Consensus 62 ~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~ 106 (418)
...+.. ........+..+.+.|.+.+.+.++ .++++++|++++
T Consensus 81 g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv--~i~~~~~v~~i~ 125 (381)
T 3c4a_A 81 NEPSLMSTGVLLCGVERRGLVHALRDKCRSQGI--AIRFESPLLEHG 125 (381)
T ss_dssp SSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTC--EEETTCCCCSGG
T ss_pred CeeEEecCCCceeeecHHHHHHHHHHHHHHCCC--EEEeCCEeccch
Confidence 000000 0001124678889999999888888 788888876653
No 174
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.50 E-value=3.5e-07 Score=91.12 Aligned_cols=40 Identities=33% Similarity=0.610 Sum_probs=36.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAW 42 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~ 42 (418)
.+||+|||||++||++|..|++.|++|+|+|+++.+||..
T Consensus 16 ~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr~ 55 (478)
T 2ivd_A 16 GMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGAV 55 (478)
T ss_dssp -CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTTC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCcee
Confidence 5799999999999999999999999999999999998743
No 175
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=98.50 E-value=3.8e-07 Score=91.80 Aligned_cols=62 Identities=16% Similarity=0.126 Sum_probs=46.8
Q ss_pred CChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCE
Q 014821 74 PDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDF 153 (418)
Q Consensus 74 ~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~ 153 (418)
..+..+...|.+.+.+.|+ .+.++ +|++++..+ .+..+.|.+.++ .++.+|.
T Consensus 170 ~~~~~l~~~L~~~a~~~gv--~~~~~-~v~~i~~~~--------------------~~~~~~v~~~~g-----~~~~ad~ 221 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGV--RHVVD-DVQHVGQDE--------------------RGWISGVHTKQH-----GEISGDL 221 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTC--EEEEC-CEEEEEECT--------------------TSCEEEEEESSS-----CEEECSE
T ss_pred EcHHHHHHHHHHHHHHCCC--EEEEC-eEeEEEEcC--------------------CCCEEEEEECCC-----CEEEcCE
Confidence 3567888899998888888 78888 999998754 011245555544 4799999
Q ss_pred EEEeeccCCC
Q 014821 154 VILCVGRFSD 163 (418)
Q Consensus 154 vIlAtG~~~~ 163 (418)
||.|+|..|.
T Consensus 222 vV~A~G~~S~ 231 (511)
T 2weu_A 222 FVDCTGFRGL 231 (511)
T ss_dssp EEECCGGGCC
T ss_pred EEECCCcchH
Confidence 9999999853
No 176
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.49 E-value=1e-06 Score=88.29 Aligned_cols=106 Identities=24% Similarity=0.289 Sum_probs=82.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ...++.+.
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~~ 244 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-------------------------------G--MDGEVAKQ 244 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-------------------------------S--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-------------------------------c--CCHHHHHH
Confidence 36899999999999999999999999999999763311 0 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+.+++.++ .+.++++|.+++..+ +...+.+.+..++...++.+|.||+|+|..
T Consensus 245 l~~~l~~~gV--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~- 299 (491)
T 3urh_A 245 LQRMLTKQGI--DFKLGAKVTGAVKSG----------------------DGAKVTFEPVKGGEATTLDAEVVLIATGRK- 299 (491)
T ss_dssp HHHHHHHTTC--EEECSEEEEEEEEET----------------------TEEEEEEEETTSCCCEEEEESEEEECCCCE-
T ss_pred HHHHHHhCCC--EEEECCeEEEEEEeC----------------------CEEEEEEEecCCCceEEEEcCEEEEeeCCc-
Confidence 8888888899 899999999998766 446677665433445689999999999954
Q ss_pred CCCCCC
Q 014821 163 DVPNIP 168 (418)
Q Consensus 163 ~~p~~p 168 (418)
|+..
T Consensus 300 --p~~~ 303 (491)
T 3urh_A 300 --PSTD 303 (491)
T ss_dssp --ECCT
T ss_pred --cCCC
Confidence 5543
No 177
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.48 E-value=7.5e-07 Score=88.19 Aligned_cols=98 Identities=20% Similarity=0.234 Sum_probs=77.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. ..+ ..++.+.
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~~--~~~~~~~ 213 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPL-------------------------------PSF--DPMISET 213 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchh-------------------------------hhh--hHHHHHH
Confidence 3689999999999999999999999999999975331 001 1357777
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.++ +++++++|.+++..+ ++...|.+.++ .++.+|.||+|+|..
T Consensus 214 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g-----~~i~~D~vv~a~G~~ 264 (450)
T 1ges_A 214 LVEVMNAEGP--QLHTNAIPKAVVKNT---------------------DGSLTLELEDG-----RSETVDCLIWAIGRE 264 (450)
T ss_dssp HHHHHHHHSC--EEECSCCEEEEEECT---------------------TSCEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC---------------------CcEEEEEECCC-----cEEEcCEEEECCCCC
Confidence 8888888898 899999999998754 23356766555 479999999999965
No 178
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=1.1e-06 Score=87.22 Aligned_cols=100 Identities=21% Similarity=0.237 Sum_probs=77.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.. . ...++..+
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 216 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-------------------------------G--FEKQMAAI 216 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------------------------------c--cCHHHHHH
Confidence 36899999999999999999999999999999763310 0 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.++ .+.++++|.+++... +...+.+... +...++.+|.||+|+|..
T Consensus 217 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~--g~~~~~~~D~vv~a~G~~ 269 (455)
T 1ebd_A 217 IKKRLKKKGV--EVVTNALAKGAEERE----------------------DGVTVTYEAN--GETKTIDADYVLVTVGRR 269 (455)
T ss_dssp HHHHHHHTTC--EEEESEEEEEEEEET----------------------TEEEEEEEET--TEEEEEEESEEEECSCEE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEEeC----------------------CeEEEEEEeC--CceeEEEcCEEEECcCCC
Confidence 8888888899 899999999998765 3345555421 234689999999999965
No 179
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.47 E-value=2.8e-06 Score=85.27 Aligned_cols=101 Identities=23% Similarity=0.365 Sum_probs=78.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. .. -..++...+
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 223 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRIL-------------------------------RK--FDESVINVL 223 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred CeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccC-------------------------------cc--cchhhHHHH
Confidence 689999999999999999999999999999976331 00 114677788
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeE-EEeCEEEEeeccCC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEV-HQVDFVILCVGRFS 162 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-i~~d~vIlAtG~~~ 162 (418)
.+..++.|+ ++.++++|.+++... ++...|.+.++ .+ +.||.||+|+|..
T Consensus 224 ~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~g-----~~~~~~D~vi~a~G~~- 274 (500)
T 1onf_A 224 ENDMKKNNI--NIVTFADVVEIKKVS---------------------DKNLSIHLSDG-----RIYEHFDHVIYCVGRS- 274 (500)
T ss_dssp HHHHHHTTC--EEECSCCEEEEEESS---------------------TTCEEEEETTS-----CEEEEESEEEECCCBC-
T ss_pred HHHHHhCCC--EEEECCEEEEEEEcC---------------------CceEEEEECCC-----cEEEECCEEEECCCCC-
Confidence 888888899 899999999998754 12356666554 34 9999999999954
Q ss_pred CCCCCC
Q 014821 163 DVPNIP 168 (418)
Q Consensus 163 ~~p~~p 168 (418)
|+..
T Consensus 275 --p~~~ 278 (500)
T 1onf_A 275 --PDTE 278 (500)
T ss_dssp --CTTT
T ss_pred --cCCC
Confidence 5543
No 180
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.46 E-value=1.4e-06 Score=86.74 Aligned_cols=103 Identities=25% Similarity=0.408 Sum_probs=78.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+... .+ ..++..++
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------~~--~~~~~~~l 226 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV------------------------------GI--DMEISKNF 226 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS------------------------------SC--CHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc------------------------------cc--CHHHHHHH
Confidence 68999999999999999999999999999997633110 11 14677788
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+..++.|+ ++.++++|.+++... +....+.+.+...+...++.+|.||+|+|..
T Consensus 227 ~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~ 281 (474)
T 1zmd_A 227 QRILQKQGF--KFKLNTKVTGATKKS---------------------DGKIDVSIEAASGGKAEVITCDVLLVCIGRR 281 (474)
T ss_dssp HHHHHHTTC--EEECSEEEEEEEECT---------------------TSCEEEEEEETTSCCCEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCceEEEEEEcC---------------------CceEEEEEEecCCCCceEEEcCEEEECcCCC
Confidence 888888899 899999999998765 1225565542212233689999999999965
No 181
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.45 E-value=7.4e-07 Score=88.16 Aligned_cols=97 Identities=19% Similarity=0.223 Sum_probs=75.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|++|+.+|..|++.|.+|+++|+.+.+... . ...++.+.
T Consensus 149 ~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~------------------------------~--~~~~~~~~ 196 (447)
T 1nhp_A 149 VNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGV------------------------------Y--LDKEFTDV 196 (447)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTT------------------------------T--CCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCcccccc------------------------------c--CCHHHHHH
Confidence 479999999999999999999999999999997633110 0 11467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.++ ++.++++|.+++... ..+.+.+ ++ .++.+|.||+|+|..
T Consensus 197 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~v~~v~~-~~-----~~i~~d~vi~a~G~~ 245 (447)
T 1nhp_A 197 LTEEMEANNI--TIATGETVERYEGDG----------------------RVQKVVT-DK-----NAYDADLVVVAVGVR 245 (447)
T ss_dssp HHHHHHTTTE--EEEESCCEEEEECSS----------------------BCCEEEE-SS-----CEEECSEEEECSCEE
T ss_pred HHHHHHhCCC--EEEcCCEEEEEEccC----------------------cEEEEEE-CC-----CEEECCEEEECcCCC
Confidence 8888888898 899999999998543 2234544 22 479999999999965
No 182
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.44 E-value=8.4e-07 Score=88.32 Aligned_cols=102 Identities=24% Similarity=0.311 Sum_probs=79.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. . ...++.++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------------------------------~--~~~~~~~~ 223 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-------------------------------T--MDAEIRKQ 223 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------------------------------c--ccHHHHHH
Confidence 36899999999999999999999999999999763310 0 11467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ .+.++++|.+++... +...+.+.+..++...++.+|.||+|+|..
T Consensus 224 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 278 (470)
T 1dxl_A 224 FQRSLEKQGM--KFKLKTKVVGVDTSG----------------------DGVKLTVEPSAGGEQTIIEADVVLVSAGRT 278 (470)
T ss_dssp HHHHHHHSSC--CEECSEEEEEEECSS----------------------SSEEEEEEESSSCCCEEEEESEEECCCCEE
T ss_pred HHHHHHHcCC--EEEeCCEEEEEEEcC----------------------CeEEEEEEecCCCcceEEECCEEEECCCCC
Confidence 8888888899 899999999998654 335566553222334689999999999965
No 183
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.44 E-value=1e-06 Score=87.51 Aligned_cols=96 Identities=22% Similarity=0.259 Sum_probs=76.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||||+.|+.+|..|++.|.+|+++++.+.+. ..+ ..++.+.+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~~--~~~~~~~l 213 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLL-------------------------------FQF--DPLLSATL 213 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccc-------------------------------ccc--CHHHHHHH
Confidence 689999999999999999999999999999975331 001 13566777
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCcee-EEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTE-VHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~i~~d~vIlAtG~~ 161 (418)
.+..++.++ +++++++|.+++... +...|.+.++ . ++.+|.||+|+|..
T Consensus 214 ~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~G-----~~~i~~D~vv~a~G~~ 263 (463)
T 2r9z_A 214 AENMHAQGI--ETHLEFAVAALERDA----------------------QGTTLVAQDG-----TRLEGFDSVIWAVGRA 263 (463)
T ss_dssp HHHHHHTTC--EEESSCCEEEEEEET----------------------TEEEEEETTC-----CEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEeC----------------------CeEEEEEeCC-----cEEEEcCEEEECCCCC
Confidence 888888898 899999999998765 3356666554 3 79999999999965
No 184
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.40 E-value=1.8e-06 Score=84.52 Aligned_cols=99 Identities=21% Similarity=0.269 Sum_probs=78.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. .. ...++.++
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~------------------------------~~--~~~~~~~~ 199 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLA------------------------------RV--AGEALSEF 199 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhh------------------------------hh--cCHHHHHH
Confidence 46899999999999999999999999999999763310 00 12577888
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.|+ +++++++|.+++..+ +....|.+.++ .++.||.||+|+|..
T Consensus 200 l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~v~~v~l~dG-----~~i~aD~Vv~a~G~~ 250 (415)
T 3lxd_A 200 YQAEHRAHGV--DLRTGAAMDCIEGDG---------------------TKVTGVRMQDG-----SVIPADIVIVGIGIV 250 (415)
T ss_dssp HHHHHHHTTC--EEEETCCEEEEEESS---------------------SBEEEEEESSS-----CEEECSEEEECSCCE
T ss_pred HHHHHHhCCC--EEEECCEEEEEEecC---------------------CcEEEEEeCCC-----CEEEcCEEEECCCCc
Confidence 8888888999 899999999998754 12235666666 589999999999954
No 185
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.39 E-value=1.3e-06 Score=85.50 Aligned_cols=98 Identities=19% Similarity=0.295 Sum_probs=78.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+.... ...++.+.
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~--------------------------------~~~~~~~~ 190 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV--------------------------------LGRRIGAW 190 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH--------------------------------HCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh--------------------------------cCHHHHHH
Confidence 4689999999999999999999999999999976332100 01467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.|+ ++.++++|.+++.++ ....|.+.++ .++.||.||+|+|..
T Consensus 191 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~~~v~~~dg-----~~i~aD~Vv~a~G~~ 240 (410)
T 3ef6_A 191 LRGLLTELGV--QVELGTGVVGFSGEG----------------------QLEQVMASDG-----RSFVADSALICVGAE 240 (410)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEECSS----------------------SCCEEEETTS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEeccC----------------------cEEEEEECCC-----CEEEcCEEEEeeCCe
Confidence 8888888899 899999999998654 3345777666 589999999999965
No 186
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.39 E-value=2.4e-06 Score=84.88 Aligned_cols=100 Identities=22% Similarity=0.205 Sum_probs=77.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+. .. ...++.++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 217 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRAL-------------------------------PN--EDADVSKE 217 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 3689999999999999999999999999999976331 00 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ ++.++++|.+++... +...+.+.+ ++...++.||.||+|+|..
T Consensus 218 l~~~l~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~--~g~~~~~~~D~vv~a~G~~ 270 (464)
T 2a8x_A 218 IEKQFKKLGV--TILTATKVESIADGG----------------------SQVTVTVTK--DGVAQELKAEKVLQAIGFA 270 (464)
T ss_dssp HHHHHHHHTC--EEECSCEEEEEEECS----------------------SCEEEEEES--SSCEEEEEESEEEECSCEE
T ss_pred HHHHHHHcCC--EEEeCcEEEEEEEcC----------------------CeEEEEEEc--CCceEEEEcCEEEECCCCC
Confidence 8888888899 899999999998755 334555542 1334679999999999965
No 187
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.38 E-value=5.6e-07 Score=86.53 Aligned_cols=42 Identities=38% Similarity=0.603 Sum_probs=39.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC-CCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR-SDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~-~~~gg~~~~ 44 (418)
.+||+|||||++||++|+.|.+.|++++|+|++ +.+||.|..
T Consensus 44 ~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr~~t 86 (376)
T 2e1m_A 44 PKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGRIKT 86 (376)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTTCCE
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCceee
Confidence 579999999999999999999999999999999 999998776
No 188
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.38 E-value=1.6e-06 Score=91.24 Aligned_cols=38 Identities=42% Similarity=0.657 Sum_probs=36.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGG 40 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg 40 (418)
.+||+|||||++|+++|..|++.|++|+|+|+.+.+||
T Consensus 336 ~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 336 NKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 47999999999999999999999999999999988887
No 189
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.37 E-value=3.2e-06 Score=79.26 Aligned_cols=101 Identities=15% Similarity=0.233 Sum_probs=76.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.+ .....+.+.
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~-----------------------------------~~~~~~~~~ 189 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGF-----------------------------------RAEKILIKR 189 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC-----------------------------------CCCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcc-----------------------------------ccCHHHHHH
Confidence 368999999999999999999999999999986522 011355666
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCC-CceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKN-HSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.++ ++.+++++.+++.+. +....|.+.+..+ +...++.||.||+|+|..
T Consensus 190 l~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~ 246 (320)
T 1trb_A 190 LMDKVENGNI--ILHTNRTLEEVTGDQ---------------------MGVTGVRLRDTQNSDNIESLDVAGLFVAIGHS 246 (320)
T ss_dssp HHHHHHTSSE--EEECSCEEEEEEECS---------------------SSEEEEEEECCTTCCCCEEEECSEEEECSCEE
T ss_pred HHHhcccCCe--EEEcCceeEEEEcCC---------------------CceEEEEEEeccCCCceEEEEcCEEEEEeCCC
Confidence 7777777888 899999999998754 1223366654322 344689999999999965
No 190
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.37 E-value=3.5e-06 Score=84.39 Aligned_cols=103 Identities=19% Similarity=0.244 Sum_probs=78.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ...++.+.+
T Consensus 175 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~~l 221 (492)
T 3ic9_A 175 KSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN-------------------------------L--QDEEMKRYA 221 (492)
T ss_dssp SEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT-------------------------------C--CCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------------------------------c--CCHHHHHHH
Confidence 6899999999999999999999999999999763311 0 114677777
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCCC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
.+..++. + .+.++++|.+++..+ +...+.+.+ .+|...++.||.||+|+|..
T Consensus 222 ~~~l~~~-V--~i~~~~~v~~i~~~~----------------------~~v~v~~~~-~~G~~~~i~~D~Vi~a~G~~-- 273 (492)
T 3ic9_A 222 EKTFNEE-F--YFDAKARVISTIEKE----------------------DAVEVIYFD-KSGQKTTESFQYVLAATGRK-- 273 (492)
T ss_dssp HHHHHTT-S--EEETTCEEEEEEECS----------------------SSEEEEEEC-TTCCEEEEEESEEEECSCCE--
T ss_pred HHHHhhC-c--EEEECCEEEEEEEcC----------------------CEEEEEEEe-CCCceEEEECCEEEEeeCCc--
Confidence 7777765 7 789999999998765 345566543 22445689999999999954
Q ss_pred CCCCC
Q 014821 164 VPNIP 168 (418)
Q Consensus 164 ~p~~p 168 (418)
|+..
T Consensus 274 -p~~~ 277 (492)
T 3ic9_A 274 -ANVD 277 (492)
T ss_dssp -ESCS
T ss_pred -cCCC
Confidence 5544
No 191
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.36 E-value=3.4e-06 Score=83.51 Aligned_cols=100 Identities=20% Similarity=0.310 Sum_probs=77.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|.+.|.+|+++++.+.+.. ..+ ..++.+.+
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~~--d~~~~~~l 195 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLP------------------------------KYF--DKEMVAEV 195 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------TTC--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccc------------------------------ccC--CHHHHHHH
Confidence 6899999999999999999999999999999763310 001 14677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCCC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
.+.+++.|+ ++.++++|.+++..+ +...|.+.++ ++.||.||+|+|..
T Consensus 196 ~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~v~v~~~~g------~i~aD~Vv~A~G~~-- 243 (452)
T 3oc4_A 196 QKSLEKQAV--IFHFEETVLGIEETA----------------------NGIVLETSEQ------EISCDSGIFALNLH-- 243 (452)
T ss_dssp HHHHHTTTE--EEEETCCEEEEEECS----------------------SCEEEEESSC------EEEESEEEECSCCB--
T ss_pred HHHHHHcCC--EEEeCCEEEEEEccC----------------------CeEEEEECCC------EEEeCEEEECcCCC--
Confidence 888888899 899999999998654 3344555322 79999999999955
Q ss_pred CCCCC
Q 014821 164 VPNIP 168 (418)
Q Consensus 164 ~p~~p 168 (418)
|+..
T Consensus 244 -p~~~ 247 (452)
T 3oc4_A 244 -PQLA 247 (452)
T ss_dssp -CCCS
T ss_pred -CChH
Confidence 5544
No 192
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.36 E-value=5e-06 Score=82.99 Aligned_cols=101 Identities=20% Similarity=0.292 Sum_probs=80.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|++.|.+|+++++.. +. ..+ ..++.+.+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~~--d~~~~~~l 233 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSI-VL-------------------------------RGF--DQQMAELV 233 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC-SS-------------------------------TTS--CHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC-CC-------------------------------ccc--CHHHHHHH
Confidence 689999999999999999999999999998842 10 001 14677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+++.++ .+.++++|.+++... ++...|.+.++.++...++.+|.||+|+|..
T Consensus 234 ~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~ 288 (483)
T 3dgh_A 234 AASMEERGI--PFLRKTVPLSVEKQD---------------------DGKLLVKYKNVETGEESEDVYDTVLWAIGRK 288 (483)
T ss_dssp HHHHHHTTC--CEEETEEEEEEEECT---------------------TSCEEEEEEETTTCCEEEEEESEEEECSCEE
T ss_pred HHHHHhCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEecCCCCceeEEEcCEEEECcccc
Confidence 888888899 899999999998755 2345677777655566789999999999964
No 193
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.36 E-value=2.3e-06 Score=83.37 Aligned_cols=99 Identities=22% Similarity=0.313 Sum_probs=78.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||+|+.|+.+|..|.+.+.+++++++.+.+.. .. ...++.++
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~------------------------------~~--~~~~~~~~ 189 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMA------------------------------RV--VTPEISSY 189 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchh------------------------------hc--cCHHHHHH
Confidence 36899999999999999999999999999999753310 00 12467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.|+ ++.++++|.+++..+ +....|.+.++ .++.||.||+|+|..
T Consensus 190 l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~v~~V~~~dG-----~~i~aD~Vv~a~G~~ 240 (404)
T 3fg2_P 190 FHDRHSGAGI--RMHYGVRATEIAAEG---------------------DRVTGVVLSDG-----NTLPCDLVVVGVGVI 240 (404)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEEET---------------------TEEEEEEETTS-----CEEECSEEEECCCEE
T ss_pred HHHHHHhCCc--EEEECCEEEEEEecC---------------------CcEEEEEeCCC-----CEEEcCEEEECcCCc
Confidence 8888888999 899999999998764 12234666665 589999999999965
No 194
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.35 E-value=3.5e-06 Score=83.79 Aligned_cols=100 Identities=22% Similarity=0.246 Sum_probs=77.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|++.|.+|+++++.+.+.. . ...++.+.+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~~~l 221 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-------------------------------T--LDEDVTNAL 221 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------------------------------T--SCHHHHHHH
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-------------------------------c--CCHHHHHHH
Confidence 6899999999999999999999999999999763310 0 114677788
Q ss_pred HHHH-HhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYA-SHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~-~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.. ++.++ ++.++++|.+++... +...+.+.+. ++...++.||.||+|+|..
T Consensus 222 ~~~l~~~~gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~-~g~~~~i~~D~vv~a~G~~ 275 (468)
T 2qae_A 222 VGALAKNEKM--KFMTSTKVVGGTNNG----------------------DSVSLEVEGK-NGKRETVTCEALLVSVGRR 275 (468)
T ss_dssp HHHHHHHTCC--EEECSCEEEEEEECS----------------------SSEEEEEECC----EEEEEESEEEECSCEE
T ss_pred HHHHhhcCCc--EEEeCCEEEEEEEcC----------------------CeEEEEEEcC-CCceEEEECCEEEECCCcc
Confidence 8888 88899 899999999998765 3355665421 1333579999999999965
No 195
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.35 E-value=3.7e-06 Score=83.82 Aligned_cols=102 Identities=13% Similarity=0.113 Sum_probs=78.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .. ...++.+++
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~~ 234 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------------------------------RS--FDSMISTNC 234 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHHH
T ss_pred ccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999975321 00 124677788
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCC-ceEEEEecCCCCce--eEEEeCEEEEeecc
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG-KWTVAVEDAKNHST--EVHQVDFVILCVGR 160 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~--~~i~~d~vIlAtG~ 160 (418)
.+.+++.++ .+..+++|.+++... ++ ...+.+.+..++.. .++.+|.||+|+|.
T Consensus 235 ~~~l~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~ 291 (478)
T 3dk9_A 235 TEELENAGV--EVLKFSQVKEVKKTL---------------------SGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGR 291 (478)
T ss_dssp HHHHHHTTC--EEETTEEEEEEEECS---------------------SSEEEEEEECCTTSCCEEEEEEEESEEEECSCE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEEccCCCCcccceEEEcCEEEEeecc
Confidence 888888899 899999999998765 12 24455554332332 68999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 292 ~ 292 (478)
T 3dk9_A 292 V 292 (478)
T ss_dssp E
T ss_pred c
Confidence 5
No 196
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.34 E-value=2.4e-06 Score=85.47 Aligned_cols=97 Identities=14% Similarity=0.131 Sum_probs=77.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC---CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK---GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~---~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++++|||+|+.|+.+|..|.+. |.+|+++++.+.+.. . -..++.
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------------------------------~--~d~~~~ 234 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-------------------------------G--FDSELR 234 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-------------------------------T--SCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-------------------------------c--cCHHHH
Confidence 6899999999999999999998 999999999763310 0 114677
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+.+.+.+++.|+ +++++++|.+++..+ ++...|.+.++ .++.||.||+|+|.
T Consensus 235 ~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~G-----~~i~~D~vv~a~G~ 286 (490)
T 1fec_A 235 KQLTEQLRANGI--NVRTHENPAKVTKNA---------------------DGTRHVVFESG-----AEADYDVVMLAIGR 286 (490)
T ss_dssp HHHHHHHHHTTE--EEEETCCEEEEEECT---------------------TSCEEEEETTS-----CEEEESEEEECSCE
T ss_pred HHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CCEEEEEECCC-----cEEEcCEEEEccCC
Confidence 888888888899 899999999998764 23356666554 47999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 287 ~ 287 (490)
T 1fec_A 287 V 287 (490)
T ss_dssp E
T ss_pred C
Confidence 5
No 197
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.34 E-value=2.5e-06 Score=85.54 Aligned_cols=97 Identities=15% Similarity=0.199 Sum_probs=77.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhC---CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLK---GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVL 80 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~---~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (418)
++++|||+|+.|+.+|..|++. |.+|+++++.+.+. .. -..++.
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~ 238 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLIL-------------------------------RG--FDETIR 238 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSC-------------------------------TT--SCHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCccc-------------------------------cc--cCHHHH
Confidence 6899999999999999999998 99999999975321 00 114677
Q ss_pred HHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 81 DYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 81 ~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
..+.+.+++.++ +++++++|.+++... ++...|.+.++ .++.||.||+|+|.
T Consensus 239 ~~l~~~l~~~GV--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~G-----~~i~~D~vv~a~G~ 290 (495)
T 2wpf_A 239 EEVTKQLTANGI--EIMTNENPAKVSLNT---------------------DGSKHVTFESG-----KTLDVDVVMMAIGR 290 (495)
T ss_dssp HHHHHHHHHTTC--EEEESCCEEEEEECT---------------------TSCEEEEETTS-----CEEEESEEEECSCE
T ss_pred HHHHHHHHhCCC--EEEeCCEEEEEEEcC---------------------CceEEEEECCC-----cEEEcCEEEECCCC
Confidence 788888888899 899999999998754 23356666555 47999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 291 ~ 291 (495)
T 2wpf_A 291 I 291 (495)
T ss_dssp E
T ss_pred c
Confidence 5
No 198
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.33 E-value=2.7e-06 Score=85.82 Aligned_cols=98 Identities=15% Similarity=0.229 Sum_probs=77.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~l 261 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLK-------------------------------LI--KDNETRAYV 261 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------TC--CSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCccc-------------------------------cc--ccHHHHHHH
Confidence 789999999999999999999999999999976331 00 124677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCc---eEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGK---WTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.+.+++.|+ +++++++|.+++..+ ++. +.|.+.++ ..++.||.||+|+|.
T Consensus 262 ~~~l~~~GV--~i~~~~~V~~i~~~~---------------------~~~v~~~~v~~~~G----~~~i~aD~Vv~A~G~ 314 (523)
T 1mo9_A 262 LDRMKEQGM--EIISGSNVTRIEEDA---------------------NGRVQAVVAMTPNG----EMRIETDFVFLGLGE 314 (523)
T ss_dssp HHHHHHTTC--EEESSCEEEEEEECT---------------------TSBEEEEEEEETTE----EEEEECSCEEECCCC
T ss_pred HHHHHhCCc--EEEECCEEEEEEEcC---------------------CCceEEEEEEECCC----cEEEEcCEEEECcCC
Confidence 888888899 899999999998754 122 45655443 137999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 315 ~ 315 (523)
T 1mo9_A 315 Q 315 (523)
T ss_dssp E
T ss_pred c
Confidence 5
No 199
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.33 E-value=6.4e-06 Score=82.36 Aligned_cols=101 Identities=17% Similarity=0.157 Sum_probs=79.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|++.|.+|+++++.. +. ..+ ..++.+.+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~-~l-------------------------------~~~--d~~~~~~l 231 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTGIGLDTTVMMRSI-PL-------------------------------RGF--DQQMSSLV 231 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TTS--CHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCceEEEEcCc-cc-------------------------------ccC--CHHHHHHH
Confidence 579999999999999999999999999999842 10 001 14677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+..++.++ .+++++.+.+++... ++...+.+.+..++...++.||.||+|+|..
T Consensus 232 ~~~l~~~gv--~~~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~ 286 (488)
T 3dgz_A 232 TEHMESHGT--QFLKGCVPSHIKKLP---------------------TNQLQVTWEDHASGKEDTGTFDTVLWAIGRV 286 (488)
T ss_dssp HHHHHHTTC--EEEETEEEEEEEECT---------------------TSCEEEEEEETTTTEEEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEcC---------------------CCcEEEEEEeCCCCeeEEEECCEEEEcccCC
Confidence 888888899 899999999998754 2445676666444555578999999999954
No 200
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.33 E-value=1.2e-06 Score=86.96 Aligned_cols=101 Identities=22% Similarity=0.252 Sum_probs=76.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||++|+.+|..|++.|.+|+|+++.+.+.. . ...++..+
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 217 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-------------------------------T--YDSELTAP 217 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-------------------------------c--cCHHHHHH
Confidence 36899999999999999999999999999999763321 0 11466777
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+.+..++.++ ++.++++|.+++. + + ..+. . ++|...++.||.||+|+|..
T Consensus 218 l~~~l~~~gv--~i~~~~~v~~i~~-~----------------------~-v~v~--~-~~G~~~~i~~D~vv~a~G~~- 267 (458)
T 1lvl_A 218 VAESLKKLGI--ALHLGHSVEGYEN-G----------------------C-LLAN--D-GKGGQLRLEADRVLVAVGRR- 267 (458)
T ss_dssp HHHHHHHHTC--EEETTCEEEEEET-T----------------------E-EEEE--C-SSSCCCEECCSCEEECCCEE-
T ss_pred HHHHHHHCCC--EEEECCEEEEEEe-C----------------------C-EEEE--E-CCCceEEEECCEEEECcCCC-
Confidence 7888888898 8999999999986 5 2 3333 2 12333579999999999965
Q ss_pred CCCCCC
Q 014821 163 DVPNIP 168 (418)
Q Consensus 163 ~~p~~p 168 (418)
|+.+
T Consensus 268 --p~~~ 271 (458)
T 1lvl_A 268 --PRTK 271 (458)
T ss_dssp --ECCS
T ss_pred --cCCC
Confidence 5544
No 201
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.33 E-value=3.2e-06 Score=82.57 Aligned_cols=94 Identities=23% Similarity=0.436 Sum_probs=75.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. ...++..+
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~--~~~~~~~~ 192 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMS------------------------------RA--APATLADF 192 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------------------cc--cCHHHHHH
Confidence 37899999999999999999999999999999763310 00 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.|+ +++++++|.+++ + + .|.+.++ .++.||.||+|+|..
T Consensus 193 l~~~l~~~GV--~i~~~~~v~~i~--~----------------------~--~v~~~~g-----~~i~~D~vi~a~G~~ 238 (408)
T 2gqw_A 193 VARYHAAQGV--DLRFERSVTGSV--D----------------------G--VVLLDDG-----TRIAADMVVVGIGVL 238 (408)
T ss_dssp HHHHHHHTTC--EEEESCCEEEEE--T----------------------T--EEEETTS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHcCc--EEEeCCEEEEEE--C----------------------C--EEEECCC-----CEEEcCEEEECcCCC
Confidence 8888888899 899999999998 4 2 4666554 579999999999965
No 202
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.32 E-value=1.9e-06 Score=86.01 Aligned_cols=101 Identities=22% Similarity=0.201 Sum_probs=77.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+.+.. . ...++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 231 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-------------------------------G--ADRDLVKV 231 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------------------------------T--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------------------------------c--cCHHHHHH
Confidence 36899999999999999999999999999999763310 0 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ .+.++++|.+++... +...|.+.+.. +...++.||.||+|+|..
T Consensus 232 l~~~l~~~gV--~i~~~~~v~~i~~~~----------------------~~~~v~~~~~~-~~g~~~~~D~vv~a~G~~ 285 (482)
T 1ojt_A 232 WQKQNEYRFD--NIMVNTKTVAVEPKE----------------------DGVYVTFEGAN-APKEPQRYDAVLVAAGRA 285 (482)
T ss_dssp HHHHHGGGEE--EEECSCEEEEEEEET----------------------TEEEEEEESSS-CCSSCEEESCEEECCCEE
T ss_pred HHHHHHhcCC--EEEECCEEEEEEEcC----------------------CeEEEEEeccC-CCceEEEcCEEEECcCCC
Confidence 8888888888 899999999998765 33556665410 111468899999999965
No 203
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.32 E-value=3.3e-06 Score=83.04 Aligned_cols=99 Identities=17% Similarity=0.292 Sum_probs=76.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. ...++.++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~------------------------------~~--~~~~~~~~ 196 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLE------------------------------RV--TAPPVSAF 196 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTT------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccc------------------------------ch--hhHHHHHH
Confidence 36899999999999999999999999999999753210 00 11467777
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEE--cCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEF--EGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
+.+..++.|+ .+.++++|.+++. .+ +....|.+.++ .++.||.||+|+|.
T Consensus 197 l~~~l~~~GV--~i~~~~~v~~i~~~~~~---------------------~~v~~v~~~~G-----~~i~~D~Vv~a~G~ 248 (431)
T 1q1r_A 197 YEHLHREAGV--DIRTGTQVCGFEMSTDQ---------------------QKVTAVLCEDG-----TRLPADLVIAGIGL 248 (431)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEEECTTT---------------------CCEEEEEETTS-----CEEECSEEEECCCE
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEeccCC---------------------CcEEEEEeCCC-----CEEEcCEEEECCCC
Confidence 8888888899 8999999999987 33 12235666555 57999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 249 ~ 249 (431)
T 1q1r_A 249 I 249 (431)
T ss_dssp E
T ss_pred C
Confidence 5
No 204
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.30 E-value=3.4e-06 Score=84.57 Aligned_cols=96 Identities=13% Similarity=0.189 Sum_probs=77.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+.+
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~l 229 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVL-------------------------------PY--EDADAALVL 229 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSS-------------------------------CC--SSHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHHH
Confidence 689999999999999999999999999999976331 01 114677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+++.|+ .+.++++|.+++... +...|...++ .++.+|.||+|+|..
T Consensus 230 ~~~l~~~GV--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~i~aD~Vv~a~G~~ 278 (499)
T 1xdi_A 230 EESFAERGV--RLFKNARAASVTRTG----------------------AGVLVTMTDG-----RTVEGSHALMTIGSV 278 (499)
T ss_dssp HHHHHHTTC--EEETTCCEEEEEECS----------------------SSEEEEETTS-----CEEEESEEEECCCEE
T ss_pred HHHHHHCCC--EEEeCCEEEEEEEeC----------------------CEEEEEECCC-----cEEEcCEEEECCCCC
Confidence 888888899 899999999998765 3355554444 579999999999965
No 205
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.30 E-value=3.4e-06 Score=83.86 Aligned_cols=95 Identities=11% Similarity=0.165 Sum_probs=76.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|.+.|.+|+++++.+.+. . ...++.+.
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~ 221 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------------------------------R---EDPAIGEA 221 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------------------------------T---SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------------------------------C---CCHHHHHH
Confidence 3689999999999999999999999999999975221 1 11467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.|+ +++++++|.+++.+. +.+.|.+. + .++.+|.||+|+|..
T Consensus 222 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~~~~v~~~-~-----~~i~aD~Vv~a~G~~ 270 (467)
T 1zk7_A 222 VTAAFRAEGI--EVLEHTQASQVAHMD----------------------GEFVLTTT-H-----GELRADKLLVATGRT 270 (467)
T ss_dssp HHHHHHHTTC--EEETTCCEEEEEEET----------------------TEEEEEET-T-----EEEEESEEEECSCEE
T ss_pred HHHHHHhCCC--EEEcCCEEEEEEEeC----------------------CEEEEEEC-C-----cEEEcCEEEECCCCC
Confidence 8888888899 899999999998755 34555553 2 479999999999965
No 206
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.30 E-value=1.9e-06 Score=89.13 Aligned_cols=35 Identities=14% Similarity=0.081 Sum_probs=32.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC------CCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK------GFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~------~~~v~iie~~~~ 37 (418)
.+||+|||||.|||++|..|++. |.+|+|||+...
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~~V~vleK~~~ 62 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEAKILLVDKASL 62 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTCCEEEECSSCT
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCCcEEEEEecCC
Confidence 37999999999999999999997 999999999653
No 207
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.30 E-value=5.3e-06 Score=82.64 Aligned_cols=100 Identities=27% Similarity=0.303 Sum_probs=79.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .. ...++.+.
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 226 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFL-------------------------------PA--VDEQVAKE 226 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcC-------------------------------cc--cCHHHHHH
Confidence 3689999999999999999999999999999976331 00 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.++ .+.++++|.+++..+ +...+.+.+++ + ..++.+|.||+|+|..
T Consensus 227 l~~~l~~~Gv--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~-g-~~~~~~D~vi~a~G~~ 279 (476)
T 3lad_A 227 AQKILTKQGL--KILLGARVTGTEVKN----------------------KQVTVKFVDAE-G-EKSQAFDKLIVAVGRR 279 (476)
T ss_dssp HHHHHHHTTE--EEEETCEEEEEEECS----------------------SCEEEEEESSS-E-EEEEEESEEEECSCEE
T ss_pred HHHHHHhCCC--EEEECCEEEEEEEcC----------------------CEEEEEEEeCC-C-cEEEECCEEEEeeCCc
Confidence 8888888899 899999999998765 44566666542 2 4679999999999965
No 208
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.30 E-value=5.4e-06 Score=78.25 Aligned_cols=100 Identities=17% Similarity=0.134 Sum_probs=76.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|..|+.+|..|++.+.+|+++++.+.+. ......+.
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~-----------------------------------~~~~~~~~ 196 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFR-----------------------------------AHEASVKE 196 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCC-----------------------------------SCHHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccC-----------------------------------ccHHHHHH
Confidence 3689999999999999999999999999999965221 11345666
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+++..++.++ .+.+++++.+++.++ +...|.+....++...++.+|.||+|+|..
T Consensus 197 l~~~l~~~gv--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2zbw_A 197 LMKAHEEGRL--EVLTPYELRRVEGDE----------------------RVRWAVVFHNQTQEELALEVDAVLILAGYI 251 (335)
T ss_dssp HHHHHHTTSS--EEETTEEEEEEEESS----------------------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHhccccCCe--EEecCCcceeEccCC----------------------CeeEEEEEECCCCceEEEecCEEEEeecCC
Confidence 7777777788 899999999998743 223465553323445689999999999965
No 209
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.29 E-value=1.2e-06 Score=87.96 Aligned_cols=42 Identities=26% Similarity=0.357 Sum_probs=38.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHh-CCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||||++||+||..|++ .|++|+|+|+++.+||..+.
T Consensus 10 ~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~~~T 52 (513)
T 4gde_A 10 SVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGLAST 52 (513)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGGGCE
T ss_pred CCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCCeee
Confidence 3799999999999999999997 59999999999999997654
No 210
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=98.29 E-value=4.2e-07 Score=91.13 Aligned_cols=41 Identities=29% Similarity=0.453 Sum_probs=32.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~ 43 (418)
||+|||||||++||++|..|++.|++|+|+|+++.+||...
T Consensus 1 Mk~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~~~GG~~~ 41 (501)
T 4dgk_A 1 MKPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRDKPGGRAY 41 (501)
T ss_dssp CCCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-------C
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCcEEEEccCCCCCCcEE
Confidence 48899999999999999999999999999999999998543
No 211
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.29 E-value=1.1e-05 Score=83.26 Aligned_cols=35 Identities=26% Similarity=0.295 Sum_probs=32.0
Q ss_pred CccEEEEcCCHHHHHHHHHHH---h-CCCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLL---L-KGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~---~-~~~~v~iie~~~~ 37 (418)
.+||+|||||++||++|..|+ + .|.+|+|+|+...
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~~V~vlEK~~~ 60 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGLKVTLVEKAAV 60 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTCCEEEECSSCT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCCeEEEEeCcCC
Confidence 379999999999999999999 6 8999999999763
No 212
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.29 E-value=4.5e-06 Score=83.06 Aligned_cols=98 Identities=26% Similarity=0.276 Sum_probs=78.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC-CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~-~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
.++++|||+|+.|+.+|..|++. +.+|+++++.+.+.. .. ...++.+
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~------------------------------~~--~~~~~~~ 206 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMP------------------------------GF--TSKSLSQ 206 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSST------------------------------TT--SCHHHHH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccc------------------------------cc--cCHHHHH
Confidence 36899999999999999999999 999999999753210 01 1146778
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+.+++.++ ++.++++|.+++..+ +...+.+.++ .++.||.||+|+|..
T Consensus 207 ~l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~~v~v~~~~g-----~~i~aD~Vv~a~G~~ 257 (472)
T 3iwa_A 207 MLRHDLEKNDV--VVHTGEKVVRLEGEN----------------------GKVARVITDK-----RTLDADLVILAAGVS 257 (472)
T ss_dssp HHHHHHHHTTC--EEECSCCEEEEEESS----------------------SBEEEEEESS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHhcCC--EEEeCCEEEEEEccC----------------------CeEEEEEeCC-----CEEEcCEEEECCCCC
Confidence 88888888899 899999999998754 4455666665 489999999999965
No 213
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.27 E-value=4.1e-06 Score=83.70 Aligned_cols=97 Identities=19% Similarity=0.265 Sum_probs=78.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||+|+.|+.+|..|++.|.+++++++.+.+. ..+ ..++...
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l-------------------------------~~~--~~~~~~~ 237 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLIL-------------------------------RNF--DYDLRQL 237 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TTS--CHHHHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCccc-------------------------------ccc--CHHHHHH
Confidence 3689999999999999999999999999999975331 001 1467777
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.|+ .+.++++|.+++..+ +.+.|.+.++ .++.+|.||+|+|..
T Consensus 238 l~~~l~~~Gv--~i~~~~~V~~i~~~~----------------------~~v~v~~~~g-----~~i~aD~Vi~A~G~~ 287 (484)
T 3o0h_A 238 LNDAMVAKGI--SIIYEATVSQVQSTE----------------------NCYNVVLTNG-----QTICADRVMLATGRV 287 (484)
T ss_dssp HHHHHHHHTC--EEESSCCEEEEEECS----------------------SSEEEEETTS-----CEEEESEEEECCCEE
T ss_pred HHHHHHHCCC--EEEeCCEEEEEEeeC----------------------CEEEEEECCC-----cEEEcCEEEEeeCCC
Confidence 8888888899 899999999998765 4466777665 589999999999965
No 214
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.27 E-value=4.5e-06 Score=83.30 Aligned_cols=99 Identities=18% Similarity=0.213 Sum_probs=76.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||||+.|+.+|..|++.|.+|+++++.+.+. .. ...++.+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~d~~~~~~ 231 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVL-------------------------------RK--FDECIQNT 231 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCccc-------------------------------cc--cCHHHHHH
Confidence 3689999999999999999999999999999976331 00 11467777
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCC-ceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRG-KWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.|+ ++.++++|.+++..+ ++ ...|.+.++ . .++.+|.||+|+|..
T Consensus 232 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~~v~~~~G---~-~~i~~D~vv~a~G~~ 284 (479)
T 2hqm_A 232 ITDHYVKEGI--NVHKLSKIVKVEKNV---------------------ETDKLKIHMNDS---K-SIDDVDELIWTIGRK 284 (479)
T ss_dssp HHHHHHHHTC--EEECSCCEEEEEECC----------------------CCCEEEEETTS---C-EEEEESEEEECSCEE
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEEcC---------------------CCcEEEEEECCC---c-EEEEcCEEEECCCCC
Confidence 8888888899 899999999998754 12 245655443 1 479999999999965
No 215
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.26 E-value=2.8e-06 Score=84.77 Aligned_cols=96 Identities=21% Similarity=0.276 Sum_probs=74.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|++|+.+|..|++.|.+|+++++.+.+.. . ...++.+.
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~--~~~~~~~~ 232 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-------------------------------I--YDGDMAEY 232 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-------------------------------S--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-------------------------------c--CCHHHHHH
Confidence 47899999999999999999999999999999753311 0 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.|+ ++.++++|.+++... +.+.+.+. + .++.||.||+|+|..
T Consensus 233 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~v~~v~~~-~-----~~i~~D~vi~a~G~~ 281 (480)
T 3cgb_A 233 IYKEADKHHI--EILTNENVKAFKGNE----------------------RVEAVETD-K-----GTYKADLVLVSVGVK 281 (480)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEESS----------------------BEEEEEET-T-----EEEECSEEEECSCEE
T ss_pred HHHHHHHcCc--EEEcCCEEEEEEcCC----------------------cEEEEEEC-C-----CEEEcCEEEECcCCC
Confidence 8888888899 899999999998643 22334432 2 379999999999965
No 216
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.26 E-value=3.7e-06 Score=84.17 Aligned_cols=97 Identities=22% Similarity=0.279 Sum_probs=74.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+.. .. ...++.+.
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~--~~~~~~~~ 241 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLA------------------------------GY--YDRDLTDL 241 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------TT--SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhh------------------------------hH--HHHHHHHH
Confidence 46899999999999999999999999999999753310 00 11467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ ++.++++|.+++.+. ....+.+ ++ .++.||.||+|+|..
T Consensus 242 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~v~~v~~-~g-----~~i~~D~Vi~a~G~~ 290 (490)
T 2bc0_A 242 MAKNMEEHGI--QLAFGETVKEVAGNG----------------------KVEKIIT-DK-----NEYDVDMVILAVGFR 290 (490)
T ss_dssp HHHHHHTTTC--EEEETCCEEEEECSS----------------------SCCEEEE-SS-----CEEECSEEEECCCEE
T ss_pred HHHHHHhCCe--EEEeCCEEEEEEcCC----------------------cEEEEEE-CC-----cEEECCEEEECCCCC
Confidence 8888888899 899999999998532 2223444 33 479999999999965
No 217
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.26 E-value=3.9e-06 Score=82.71 Aligned_cols=93 Identities=19% Similarity=0.327 Sum_probs=73.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||||+.|+.+|..|++.|.+|+++++.+.+.. .+ ..++.+.
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-------------------------------~~--d~~~~~~ 193 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-------------------------------LM--DADMNQP 193 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-------------------------------TS--CGGGGHH
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-------------------------------cc--cchhHHH
Confidence 35899999999999999999999999999999763311 01 1355667
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ .+.++++|.+++... +.+.++ +++.||.|++|+|..
T Consensus 194 ~~~~l~~~gV--~i~~~~~v~~~~~~~--------------------------v~~~~g-----~~~~~D~vl~a~G~~ 239 (437)
T 4eqs_A 194 ILDELDKREI--PYRLNEEINAINGNE--------------------------ITFKSG-----KVEHYDMIIEGVGTH 239 (437)
T ss_dssp HHHHHHHTTC--CEEESCCEEEEETTE--------------------------EEETTS-----CEEECSEEEECCCEE
T ss_pred HHHHhhccce--EEEeccEEEEecCCe--------------------------eeecCC-----eEEeeeeEEEEecee
Confidence 7778888899 899999998876433 666666 589999999999954
No 218
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.26 E-value=4.5e-06 Score=82.62 Aligned_cols=97 Identities=16% Similarity=0.227 Sum_probs=74.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .. ...++.+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~--~~~~~~~~ 196 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLY------------------------------KY--FDKEFTDI 196 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTT------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhh------------------------------hh--hhhhHHHH
Confidence 36899999999999999999999999999999753310 00 11467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceE-EEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWT-VAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.|+ .++++++|.+++..+ +... +.. ++ .++.||.||+|+|..
T Consensus 197 l~~~l~~~Gv--~i~~~~~v~~i~~~~----------------------~~v~~v~~-~g-----~~i~~D~vv~a~G~~ 246 (452)
T 2cdu_A 197 LAKDYEAHGV--NLVLGSKVAAFEEVD----------------------DEIITKTL-DG-----KEIKSDIAILCIGFR 246 (452)
T ss_dssp HHHHHHHTTC--EEEESSCEEEEEEET----------------------TEEEEEET-TS-----CEEEESEEEECCCEE
T ss_pred HHHHHHHCCC--EEEcCCeeEEEEcCC----------------------CeEEEEEe-CC-----CEEECCEEEECcCCC
Confidence 8888888899 899999999998643 2222 332 33 479999999999965
No 219
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.25 E-value=6.1e-06 Score=84.02 Aligned_cols=114 Identities=15% Similarity=0.307 Sum_probs=77.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. . ....++...+
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~--~~~~~~~~~l 198 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVM-------------------------------T--PVDREMAGFA 198 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSC-------------------------------T--TSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccc-------------------------------h--hcCHHHHHHH
Confidence 589999999999999999999999999999975321 1 0124677788
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCC-CCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFG-SRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+++.++ .+.+++++.+++... ..... ....+...... .++...+...++ .++.||.||+|+|..
T Consensus 199 ~~~l~~~GV--~i~~~~~v~~i~~~~--~~~~~--~~~~~~~~~~~~~~~~~~v~~~~g-----~~i~~D~vi~a~G~~ 266 (565)
T 3ntd_A 199 HQAIRDQGV--DLRLGTALSEVSYQV--QTHVA--SDAAGEDTAHQHIKGHLSLTLSNG-----ELLETDLLIMAIGVR 266 (565)
T ss_dssp HHHHHHTTC--EEEETCCEEEEEEEC--CCCCC--CGGGTCCCTTCCTTCEEEEEETTS-----CEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCeEEEEeccc--ccccc--ccccccccccccCCCcEEEEEcCC-----CEEEcCEEEECcCCc
Confidence 888888899 899999999998742 00000 00000000000 123455555444 489999999999965
No 220
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.23 E-value=6e-07 Score=90.51 Aligned_cols=44 Identities=39% Similarity=0.600 Sum_probs=39.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCCCCCccccc
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~~~gg~~~~ 44 (418)
|+.+||+|||||++||++|..|++.| ++|+|+|+++++||....
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~~t 50 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRLQT 50 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTCCE
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCceee
Confidence 34579999999999999999999999 999999999999997544
No 221
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.23 E-value=2.3e-06 Score=82.36 Aligned_cols=90 Identities=14% Similarity=0.168 Sum_probs=72.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||||+.|+.+|..|++.|.+|+++++.+.+. . -..++.+++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~---~~~~~~~~l 189 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFL-------------------------------G---LDEELSNMI 189 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCT-------------------------------T---CCHHHHHHH
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeec-------------------------------c---CCHHHHHHH
Confidence 689999999999999999999999999999976331 1 114677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+..++.++ ++.++++|.+++. . .|.+.++ . +.+|.||+|+|..
T Consensus 190 ~~~l~~~gV--~i~~~~~v~~i~~-~-------------------------~v~~~~g-----~-i~~D~vi~a~G~~ 233 (367)
T 1xhc_A 190 KDMLEETGV--KFFLNSELLEANE-E-------------------------GVLTNSG-----F-IEGKVKICAIGIV 233 (367)
T ss_dssp HHHHHHTTE--EEECSCCEEEECS-S-------------------------EEEETTE-----E-EECSCEEEECCEE
T ss_pred HHHHHHCCC--EEEcCCEEEEEEe-e-------------------------EEEECCC-----E-EEcCEEEECcCCC
Confidence 888888899 8999999998862 1 2555443 4 9999999999965
No 222
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.21 E-value=2.5e-06 Score=83.58 Aligned_cols=43 Identities=35% Similarity=0.558 Sum_probs=39.9
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCCCCCccccc
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~~~gg~~~~ 44 (418)
+.+||+|||||++||++|..|++.| .+|+|+|+++.+||.+..
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG~~~t 48 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGGKCHS 48 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSSTTCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCCcccc
Confidence 4689999999999999999999999 899999999999997665
No 223
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.19 E-value=7e-06 Score=82.87 Aligned_cols=101 Identities=18% Similarity=0.147 Sum_probs=80.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||||+.|+..|..+++.|.+|+|+++.. + ... ...++...
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~-~-------------------------------L~~--~D~ei~~~ 268 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSI-V-------------------------------LRG--FDQQCAVK 268 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSC-S-------------------------------STT--SCHHHHHH
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEecccc-c-------------------------------ccc--cchhHHHH
Confidence 3689999999999999999999999999998742 1 001 12578888
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFS 162 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~ 162 (418)
+....++.++ .+..+..+..++... +...|.+.++ .++.+|.|++|+|.
T Consensus 269 l~~~l~~~gi--~~~~~~~v~~~~~~~----------------------~~~~v~~~~~-----~~~~~D~vLvAvGR-- 317 (542)
T 4b1b_A 269 VKLYMEEQGV--MFKNGILPKKLTKMD----------------------DKILVEFSDK-----TSELYDTVLYAIGR-- 317 (542)
T ss_dssp HHHHHHHTTC--EEEETCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECSCE--
T ss_pred HHHHHHhhcc--eeecceEEEEEEecC----------------------CeEEEEEcCC-----CeEEEEEEEEcccc--
Confidence 8888899899 899999999998876 4456666555 47889999999995
Q ss_pred CCCCCCC
Q 014821 163 DVPNIPE 169 (418)
Q Consensus 163 ~~p~~p~ 169 (418)
.|+...
T Consensus 318 -~Pnt~~ 323 (542)
T 4b1b_A 318 -KGDIDG 323 (542)
T ss_dssp -EESCGG
T ss_pred -cCCccc
Confidence 476654
No 224
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.19 E-value=4.7e-06 Score=81.95 Aligned_cols=106 Identities=13% Similarity=0.042 Sum_probs=71.9
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhhhh
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATMLS 283 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (418)
|+|+|||+|..|+.+|..|.+.+.. .+|+++.+++.+... |.-.
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~-~~VtlI~~~~~~~~~-------p~l~---------------------------- 46 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPD-LKITLISDRPYFGFT-------PAFP---------------------------- 46 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTT-CEEEEECSSSEEECG-------GGHH----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHhccCcC-CeEEEEcCCCCCccC-------ccHH----------------------------
Confidence 6899999999999999999887654 569999988753221 0000
Q ss_pred HHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccCceeEec--CcEEEcCCce
Q 014821 284 PLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCE--DGIVVDGQTT 361 (418)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~--~~v~~~~g~~ 361 (418)
...... +.+. .+...+.+.+++.+|+++.+.+..++. +.|++++|++
T Consensus 47 -----------~v~~g~-------~~~~-------------~i~~~~~~~~~~~gv~~i~~~v~~Id~~~~~V~~~~g~~ 95 (430)
T 3hyw_A 47 -----------HLAMGW-------RKFE-------------DISVPLAPLLPKFNIEFINEKAESIDPDANTVTTQSGKK 95 (430)
T ss_dssp -----------HHHHTC-------SCGG-------------GSEEESTTTGGGGTEEEECSCEEEEETTTTEEEETTCCE
T ss_pred -----------HHhcCC-------CCHH-------------HhhhcHHHHHHHCCcEEEEeEEEEEECCCCEEEECCCCE
Confidence 000000 0000 011122345566789999998888875 4599999999
Q ss_pred eeeccEEEEccCCCCC
Q 014821 362 PLKTDLVILATGFKGD 377 (418)
Q Consensus 362 ~~~~D~Vi~atG~~~~ 377 (418)
+++|.+|+|||.+..
T Consensus 96 -i~YD~LViAtG~~~~ 110 (430)
T 3hyw_A 96 -IEYDYLVIATGPKLV 110 (430)
T ss_dssp -EECSEEEECCCCEEE
T ss_pred -EECCEEEEeCCCCcc
Confidence 999999999997643
No 225
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.18 E-value=1.4e-06 Score=86.37 Aligned_cols=42 Identities=14% Similarity=0.352 Sum_probs=39.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 11 ~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~~t 52 (453)
T 2bcg_G 11 DYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEAAS 52 (453)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccccc
Confidence 579999999999999999999999999999999999998766
No 226
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.18 E-value=8.4e-06 Score=80.90 Aligned_cols=97 Identities=14% Similarity=0.205 Sum_probs=76.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||+|+.|+.+|..|.+.|.+|+++++.+.+. .. ...++.+.
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l-------------------------------~~--~~~~~~~~ 216 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEIL-------------------------------SR--FDQDMRRG 216 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSS-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccc-------------------------------cc--cCHHHHHH
Confidence 3689999999999999999999999999999975321 00 11467788
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEE-EecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVA-VEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.|+ ++.++++|.+++..+ ++...|. +.++ + +.+|.||+|+|..
T Consensus 217 l~~~l~~~Gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~g-----~-i~aD~Vv~a~G~~ 267 (463)
T 4dna_A 217 LHAAMEEKGI--RILCEDIIQSVSADA---------------------DGRRVATTMKHG-----E-IVADQVMLALGRM 267 (463)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEECT---------------------TSCEEEEESSSC-----E-EEESEEEECSCEE
T ss_pred HHHHHHHCCC--EEECCCEEEEEEEcC---------------------CCEEEEEEcCCC-----e-EEeCEEEEeeCcc
Confidence 8888888899 899999999998865 2334555 4444 4 9999999999965
No 227
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=98.17 E-value=1.5e-06 Score=84.25 Aligned_cols=44 Identities=39% Similarity=0.579 Sum_probs=41.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
|+++||+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 1 m~~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 44 (384)
T 2bi7_A 1 MKSKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIGGNSYD 44 (384)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSSGGGCE
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcCCcccc
Confidence 78899999999999999999999999999999999999998876
No 228
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.17 E-value=1.8e-05 Score=79.66 Aligned_cols=104 Identities=15% Similarity=0.190 Sum_probs=75.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++++|||+|+.|+.+|..|++.|.+|+++++.. +. ..+ ..++.+.+
T Consensus 211 ~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~-~l-------------------------------~~~--d~~~~~~~ 256 (519)
T 3qfa_A 211 GKTLVVGASYVALECAGFLAGIGLDVTVMVRSI-LL-------------------------------RGF--DQDMANKI 256 (519)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESSC-SS-------------------------------TTS--CHHHHHHH
T ss_pred CeEEEECCcHHHHHHHHHHHHcCCeEEEEeccc-cc-------------------------------ccC--CHHHHHHH
Confidence 579999999999999999999999999999842 11 011 14677888
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+..++.++ .+..++.+..++... +. ..+...+.+...+.+....+.||.||+|+|..
T Consensus 257 ~~~l~~~GV--~v~~~~~v~~v~~~~--~~----------------~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~ 314 (519)
T 3qfa_A 257 GEHMEEHGI--KFIRQFVPIKVEQIE--AG----------------TPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD 314 (519)
T ss_dssp HHHHHHTTC--EEEESEEEEEEEEEE--CC----------------TTCEEEEEEEESSSSCEEEEEESEEEECSCEE
T ss_pred HHHHHHCCC--EEEeCCeEEEEEEcc--CC----------------CCceEEEEEEECCCcEEEEEECCEEEEecCCc
Confidence 888888899 899998888887644 00 01234555544332334578999999999965
No 229
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.16 E-value=8.2e-06 Score=81.69 Aligned_cols=98 Identities=18% Similarity=0.191 Sum_probs=74.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHh----CCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL----KGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQ 78 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~----~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (418)
.++|+|||||+.|+.+|..|++ .|.+|+++++.+.+. ...++ ..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~------------------------------~~~l~--~~ 227 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNM------------------------------GKILP--EY 227 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTT------------------------------TTTSC--HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccc------------------------------cccCC--HH
Confidence 3689999999999999999987 478899998864221 01111 46
Q ss_pred HHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 79 VLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 79 ~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
+...+.+..++.|+ .++++++|.+++..+ +...|.+.++ .++.||.||+|+
T Consensus 228 ~~~~~~~~l~~~GV--~v~~~~~V~~i~~~~----------------------~~~~v~l~dG-----~~i~aD~Vv~a~ 278 (493)
T 1m6i_A 228 LSNWTMEKVRREGV--KVMPNAIVQSVGVSS----------------------GKLLIKLKDG-----RKVETDHIVAAV 278 (493)
T ss_dssp HHHHHHHHHHTTTC--EEECSCCEEEEEEET----------------------TEEEEEETTS-----CEEEESEEEECC
T ss_pred HHHHHHHHHHhcCC--EEEeCCEEEEEEecC----------------------CeEEEEECCC-----CEEECCEEEECC
Confidence 67778888888899 899999999998654 3345666555 589999999999
Q ss_pred ccC
Q 014821 159 GRF 161 (418)
Q Consensus 159 G~~ 161 (418)
|..
T Consensus 279 G~~ 281 (493)
T 1m6i_A 279 GLE 281 (493)
T ss_dssp CEE
T ss_pred CCC
Confidence 965
No 230
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.16 E-value=1.1e-05 Score=83.11 Aligned_cols=40 Identities=25% Similarity=0.339 Sum_probs=36.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAW 42 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~ 42 (418)
.+||+|||||++|+.+|..|++.|++|+|||+.+..||.+
T Consensus 46 ~~dvvIIG~G~aGl~aA~~l~~~G~~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 46 KYDVVIVGSGPIGCTYARELVGAGYKVAMFDIGEIDSGLK 85 (623)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCSSSS
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCcEEEEeccCCCCCcc
Confidence 5799999999999999999999999999999988777543
No 231
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.14 E-value=1.1e-05 Score=77.21 Aligned_cols=100 Identities=16% Similarity=0.159 Sum_probs=73.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.+. ....+.+.
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~~~~ 207 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQ-----------------------------------GHGKTAHE 207 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCS-----------------------------------SCSHHHHS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCC-----------------------------------CCHHHHHH
Confidence 3689999999999999999999999999999965221 00234455
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++.++ .+.+++++.+++..+ +....|.+. ..++...++.+|.||+|+|..
T Consensus 208 l~~~~~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~-~~~g~~~~i~~D~vi~a~G~~ 262 (360)
T 3ab1_A 208 VERARANGTI--DVYLETEVASIEESN---------------------GVLTRVHLR-SSDGSKWTVEADRLLILIGFK 262 (360)
T ss_dssp SHHHHHHTSE--EEESSEEEEEEEEET---------------------TEEEEEEEE-ETTCCEEEEECSEEEECCCBC
T ss_pred HHHHhhcCce--EEEcCcCHHHhccCC---------------------CceEEEEEE-ecCCCeEEEeCCEEEECCCCC
Confidence 6666667788 899999999998764 122245554 122445689999999999954
No 232
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.14 E-value=1.2e-05 Score=75.74 Aligned_cols=98 Identities=13% Similarity=0.221 Sum_probs=72.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|++|+.+|..|.+.+.+++++++.+.+. ....+
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~-----------------------------------~~~~~--- 214 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLR-----------------------------------ASTIM--- 214 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999965221 01122
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+...+..++ .+.+++++.+++.+. +....|.+.+..++...++.||.||+|+|..
T Consensus 215 ~~~l~~~~gv--~i~~~~~v~~i~~~~---------------------~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 215 QKRAEKNEKI--EILYNTVALEAKGDG---------------------KLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp HHHHHHCTTE--EEECSEEEEEEEESS---------------------SSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred HHHHHhcCCe--EEeecceeEEEEccc---------------------CcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 2222233488 889999999998765 2234477776545666789999999999965
No 233
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.13 E-value=3.2e-06 Score=82.17 Aligned_cols=111 Identities=17% Similarity=0.118 Sum_probs=72.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHhh
Q 014821 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLATM 281 (418)
Q Consensus 202 ~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (418)
++|+|+|||+|..|+-+|..|...+.. .+|+++.+++.+... |+....
T Consensus 1 aGKkVvIIG~G~AG~~aA~~L~~~~~~-~~Vtlie~~~~~~~~-------p~~~~v------------------------ 48 (401)
T 3vrd_B 1 AGRKVVVVGGGTGGATAAKYIKLADPS-IEVTLIEPNETYYTC-------YMSNEV------------------------ 48 (401)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCTT-SEEEEECSCSSEECS-------TTHHHH------------------------
T ss_pred CcCEEEEECCcHHHHHHHHHHHhcCcC-CeEEEEeCCCCCCCc-------cCHHHH------------------------
Confidence 379999999999999999999887653 469999887643221 110000
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccCceeEecC--cEEEcCC
Q 014821 282 LSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCED--GIVVDGQ 359 (418)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~--~v~~~~g 359 (418)
... ..+.... ... .+.+...+++++.+.+..++.+ .+.+.+|
T Consensus 49 ---------------~~g--------~~~~~~~------------~~~-~~~~~~~gv~~i~~~v~~id~~~~~v~~~~g 92 (401)
T 3vrd_B 49 ---------------IGG--------DRELASL------------RVG-YDGLRAHGIQVVHDSALGIDPDKKLVKTAGG 92 (401)
T ss_dssp ---------------HHT--------SSCGGGG------------EEC-SHHHHHTTCEEECSCEEEEETTTTEEEETTS
T ss_pred ---------------hcC--------CCCHHHH------------hhC-HHHHHHCCCEEEEeEEEEEEccCcEEEeccc
Confidence 000 0000000 000 1233445789998888888754 5888999
Q ss_pred ceeeeccEEEEccCCCCCcchh
Q 014821 360 TTPLKTDLVILATGFKGDVKLK 381 (418)
Q Consensus 360 ~~~~~~D~Vi~atG~~~~~~~~ 381 (418)
.+ +.+|.+|+|||.+++..-.
T Consensus 93 ~~-i~yd~LviAtG~~~~~~~i 113 (401)
T 3vrd_B 93 AE-FAYDRCVVAPGIDLLYDKI 113 (401)
T ss_dssp CE-EECSEEEECCCEEECGGGS
T ss_pred ce-eecceeeeccCCccccCCc
Confidence 99 9999999999988765433
No 234
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.13 E-value=2.2e-06 Score=85.35 Aligned_cols=44 Identities=32% Similarity=0.494 Sum_probs=40.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCC--CceEEEeeCCCCCccccc
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~--~~v~iie~~~~~gg~~~~ 44 (418)
|.++||+|||||++||++|+.|++.| .+|+|+|+++.+||....
T Consensus 2 m~~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~GG~~~~ 47 (475)
T 3lov_A 2 MSSKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLGGKVAT 47 (475)
T ss_dssp CCSCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSBTTCCE
T ss_pred CCcccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCCceeEE
Confidence 77899999999999999999999999 999999999999886554
No 235
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=98.12 E-value=2e-06 Score=83.76 Aligned_cols=42 Identities=26% Similarity=0.422 Sum_probs=40.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC-CCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~-~~~v~iie~~~~~gg~~~~ 44 (418)
++||+|||||++|+++|..|++. |.+|+|+|+++.+||.+..
T Consensus 7 ~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG~~~~ 49 (399)
T 1v0j_A 7 RFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGGNAYS 49 (399)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSGGGCE
T ss_pred cCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCeeee
Confidence 68999999999999999999998 9999999999999998876
No 236
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.11 E-value=2.6e-05 Score=72.67 Aligned_cols=97 Identities=16% Similarity=0.197 Sum_probs=70.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|++|+.+|..|++.+.+|+++++.+.+. ... .
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~----~ 184 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------------------------------ADQ----V 184 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------------------------------SCH----H
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------------------------------ccH----H
Confidence 3689999999999999999999999999999865220 001 2
Q ss_pred HHHHHHh-cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+.+ .++ .+.+++++.++..+. +....|.+.+..++...++.+|.||+|+|..
T Consensus 185 ~~~~l~~~~gv--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 241 (310)
T 1fl2_A 185 LQDKLRSLKNV--DIILNAQTTEVKGDG---------------------SKVVGLEYRDRVSGDIHNIELAGIFVQIGLL 241 (310)
T ss_dssp HHHHHHTCTTE--EEESSEEEEEEEESS---------------------SSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHhhCCCe--EEecCCceEEEEcCC---------------------CcEEEEEEEECCCCcEEEEEcCEEEEeeCCc
Confidence 2333344 577 788999999998654 1222466665444556789999999999954
No 237
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=98.11 E-value=7.2e-06 Score=81.89 Aligned_cols=50 Identities=26% Similarity=0.262 Sum_probs=43.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCCCCCccccc--cCCcceec
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSDIGGAWIK--TVETTMLQ 52 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~~~gg~~~~--~~~~~~l~ 52 (418)
.+||+|||||++||++|..|++.| .+|+|+|+++.+||.|.. ...+..+.
T Consensus 9 ~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~GG~~~~~~~~~g~~~~ 61 (484)
T 4dsg_A 9 TPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPGGLSRSFLDENGFTWD 61 (484)
T ss_dssp SCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSSGGGCEEECTTSCEEE
T ss_pred CCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCCCeeeeeecCCCcEEe
Confidence 579999999999999999999998 799999999999999887 45554443
No 238
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.09 E-value=1.2e-05 Score=82.23 Aligned_cols=95 Identities=20% Similarity=0.368 Sum_probs=75.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.|.+|+++++.+.+. .. ...++.+.
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l-------------------------------~~--~~~~~~~~ 233 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVM-------------------------------PP--IDYEMAAY 233 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------------------------------TT--SCHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccc-------------------------------cc--CCHHHHHH
Confidence 3689999999999999999999999999999975331 01 12467778
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+++.++ .+.++++|.+++... + .|.+.++ .++.||.||+|+|..
T Consensus 234 l~~~l~~~GV--~i~~~~~v~~i~~~~----------------------~--~v~~~~g-----~~i~~D~Vi~a~G~~ 281 (588)
T 3ics_A 234 VHEHMKNHDV--ELVFEDGVDALEENG----------------------A--VVRLKSG-----SVIQTDMLILAIGVQ 281 (588)
T ss_dssp HHHHHHHTTC--EEECSCCEEEEEGGG----------------------T--EEEETTS-----CEEECSEEEECSCEE
T ss_pred HHHHHHHcCC--EEEECCeEEEEecCC----------------------C--EEEECCC-----CEEEcCEEEEccCCC
Confidence 8888888899 899999999997654 2 3555555 489999999999965
No 239
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.09 E-value=1.6e-05 Score=74.69 Aligned_cols=97 Identities=13% Similarity=0.158 Sum_probs=69.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. ....+
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~--- 193 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLR-----------------------------------ANKVA--- 193 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCC-----------------------------------cchHH---
Confidence 3689999999999999999999999999999865220 00122
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+...++.++ ++.++++++++..+. ....|.+.+..+|...++.||.||+|+|..
T Consensus 194 ~~~l~~~~gv--~i~~~~~v~~i~~~~----------------------~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 248 (325)
T 2q7v_A 194 QARAFANPKM--KFIWDTAVEEIQGAD----------------------SVSGVKLRNLKTGEVSELATDGVFIFIGHV 248 (325)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS----------------------SEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHHhcCCc--eEecCCceEEEccCC----------------------cEEEEEEEECCCCcEEEEEcCEEEEccCCC
Confidence 2233333577 788899999998643 223466654333555689999999999955
No 240
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.07 E-value=2e-06 Score=85.07 Aligned_cols=43 Identities=42% Similarity=0.561 Sum_probs=39.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 46 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGRTWT 46 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTCCE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCceec
Confidence 3589999999999999999999999999999999999987643
No 241
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.06 E-value=1.4e-05 Score=74.47 Aligned_cols=98 Identities=13% Similarity=0.134 Sum_probs=69.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. ....+
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------------------------------~~~~~--- 184 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFR-----------------------------------CAPIT--- 184 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccC-----------------------------------CCHHH---
Confidence 3689999999999999999999999999999865220 00122
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+...++.++ ++.+++++.++...+ +....|.+.+..++...++.||.||+|+|..
T Consensus 185 ~~~l~~~~gv--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 240 (311)
T 2q0l_A 185 LEHAKNNDKI--EFLTPYVVEEIKGDA---------------------SGVSSLSIKNTATNEKRELVVPGFFIFVGYD 240 (311)
T ss_dssp HHHHHTCTTE--EEETTEEEEEEEEET---------------------TEEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred HHHHhhCCCe--EEEeCCEEEEEECCC---------------------CcEeEEEEEecCCCceEEEecCEEEEEecCc
Confidence 2222234577 788899999998763 1222455554223455689999999999965
No 242
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.05 E-value=3.1e-05 Score=72.48 Aligned_cols=96 Identities=19% Similarity=0.181 Sum_probs=69.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.+.+|+++++.+.+. ....+.+
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~-----------------------------------~~~~l~~-- 198 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYM-----------------------------------CENAYVQ-- 198 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCC-----------------------------------SCHHHHH--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccC-----------------------------------CCHHHHH--
Confidence 689999999999999999999999999999864220 0122322
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+.++ .+.+++++.++...+ +....|.+.+..++...++.||.||+|+|..
T Consensus 199 --~l~~~gv--~i~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (319)
T 3cty_A 199 --EIKKRNI--PYIMNAQVTEIVGDG---------------------KKVTGVKYKDRTTGEEKLIETDGVFIYVGLI 251 (319)
T ss_dssp --HHHHTTC--CEECSEEEEEEEESS---------------------SSEEEEEEEETTTCCEEEECCSEEEECCCEE
T ss_pred --HHhcCCc--EEEcCCeEEEEecCC---------------------ceEEEEEEEEcCCCceEEEecCEEEEeeCCc
Confidence 3345688 899999999998754 1122455553223455689999999999965
No 243
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.05 E-value=2.6e-06 Score=84.70 Aligned_cols=42 Identities=24% Similarity=0.396 Sum_probs=38.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~~~gg~~~~ 44 (418)
++||+|||||++||++|++|++.|. +|+|+|+++.+||....
T Consensus 2 ~~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~GG~~~t 45 (477)
T 3nks_A 2 GRTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLGGWIRS 45 (477)
T ss_dssp CCEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSBTTCCE
T ss_pred CceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCceEE
Confidence 4799999999999999999999999 99999999999887654
No 244
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.05 E-value=2e-05 Score=73.65 Aligned_cols=97 Identities=19% Similarity=0.200 Sum_probs=72.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|.+.+.+++++++.+.+. + .. .+
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~----------------------------------~-~~---~~ 195 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFK----------------------------------A-QP---IY 195 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCC----------------------------------S-CH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCC----------------------------------c-CH---HH
Confidence 4689999999999999999999999999999975221 0 11 23
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++...++.++ .+.+++++.+++.+. ....|.+.+..+|...++.+|.||+|+|..
T Consensus 196 ~~~~~~~~gv--~~~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 250 (323)
T 3f8d_A 196 VETVKKKPNV--EFVLNSVVKEIKGDK----------------------VVKQVVVENLKTGEIKELNVNGVFIEIGFD 250 (323)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS----------------------SEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHhCCCc--EEEeCCEEEEEeccC----------------------ceeEEEEEECCCCceEEEEcCEEEEEECCC
Confidence 3444445577 788999999998754 334567766444555689999999999965
No 245
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.05 E-value=3.9e-06 Score=81.31 Aligned_cols=42 Identities=29% Similarity=0.430 Sum_probs=39.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||||++|+++|..|++.|.+|+|+|+++.+||.+..
T Consensus 29 ~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 70 (397)
T 3hdq_A 29 GFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIGGNAYD 70 (397)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGCC
T ss_pred CCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCCCccce
Confidence 579999999999999999999999999999999999998876
No 246
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=98.04 E-value=3.2e-06 Score=85.21 Aligned_cols=41 Identities=39% Similarity=0.662 Sum_probs=38.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~ 43 (418)
++||+|||||++||++|..|++.|++|+|+|+++.+||...
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr~~ 44 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGRTY 44 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTTCC
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCcee
Confidence 57999999999999999999999999999999999988644
No 247
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=98.03 E-value=2.5e-05 Score=73.55 Aligned_cols=98 Identities=17% Similarity=0.216 Sum_probs=70.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|..|+.+|..|++.+.+|+++++.+.+. ....+
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~-----------------------------------~~~~~--- 200 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFR-----------------------------------ASKIM--- 200 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCC-----------------------------------SCHHH---
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCC-----------------------------------ccHHH---
Confidence 3689999999999999999999999999999975220 00111
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCC--CceEEEEecCCCCceeEEEeCEEEEeecc
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSR--GKWTVAVEDAKNHSTEVHQVDFVILCVGR 160 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~i~~d~vIlAtG~ 160 (418)
.++..++.++ ++.+++++.+++.+. + ....|.+.+..++...++.||.||+|+|.
T Consensus 201 ~~~~~~~~gv--~i~~~~~v~~i~~~~---------------------~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~ 257 (333)
T 1vdc_A 201 QQRALSNPKI--DVIWNSSVVEAYGDG---------------------ERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGH 257 (333)
T ss_dssp HHHHHTCTTE--EEECSEEEEEEEESS---------------------SSSSEEEEEEEETTTCCEEEEECSEEEECSCE
T ss_pred HHHHHhCCCe--eEecCCceEEEeCCC---------------------CccceeeEEEEecCCCceEEEecCEEEEEeCC
Confidence 1233445677 788899999998754 1 11235565433355578999999999996
Q ss_pred C
Q 014821 161 F 161 (418)
Q Consensus 161 ~ 161 (418)
.
T Consensus 258 ~ 258 (333)
T 1vdc_A 258 E 258 (333)
T ss_dssp E
T ss_pred c
Confidence 5
No 248
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.01 E-value=4.3e-06 Score=83.54 Aligned_cols=43 Identities=28% Similarity=0.456 Sum_probs=39.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
+.+||+|||||++||++|..|++.|++|+|||+++.+||....
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~~~~ 52 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGRVWT 52 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCceee
Confidence 3579999999999999999999999999999999999996543
No 249
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.00 E-value=2.7e-05 Score=76.88 Aligned_cols=96 Identities=20% Similarity=0.284 Sum_probs=71.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++++|||+|+.|+.+|..|++.|.+|+++++.+.+.. ..+ ..++.+.
T Consensus 148 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~------------------------------~~~--~~~~~~~ 195 (449)
T 3kd9_A 148 VENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLR------------------------------RSF--DKEVTDI 195 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTT------------------------------TTS--CHHHHHH
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccch------------------------------hhc--CHHHHHH
Confidence 36899999999999999999999999999999763311 001 1467777
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+..++. + .+.+++.+.+++... ....+ ..++ .++.||.||+|+|..
T Consensus 196 l~~~l~~~-v--~i~~~~~v~~i~~~~----------------------~v~~v-~~~g-----~~i~~D~Vv~a~G~~ 243 (449)
T 3kd9_A 196 LEEKLKKH-V--NLRLQEITMKIEGEE----------------------RVEKV-VTDA-----GEYKAELVILATGIK 243 (449)
T ss_dssp HHHHHTTT-S--EEEESCCEEEEECSS----------------------SCCEE-EETT-----EEEECSEEEECSCEE
T ss_pred HHHHHHhC-c--EEEeCCeEEEEeccC----------------------cEEEE-EeCC-----CEEECCEEEEeeCCc
Confidence 77777776 7 788999999987543 11123 2333 579999999999965
No 250
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=98.00 E-value=5e-06 Score=83.34 Aligned_cols=42 Identities=43% Similarity=0.672 Sum_probs=39.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
++||+|||||++||++|..|++.|++|+|+|+++.+||.+..
T Consensus 13 ~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~~~~ 54 (504)
T 1sez_A 13 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGKLRS 54 (504)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSSCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCceee
Confidence 479999999999999999999999999999999999997665
No 251
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.99 E-value=2.2e-05 Score=75.03 Aligned_cols=104 Identities=15% Similarity=0.233 Sum_probs=70.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|.+|+.+|..|++.+.+|+++++.+.+... . + .........+.+++
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~------~-----------~---------d~~~~~~~~~~~~l 220 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP------D-----------A---------DPSVRLSPYTRQRL 220 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC------------------------------------CTTSCCHHHHHHH
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC------C-----------C---------CCCccCCHHHHHHH
Confidence 58999999999999999999999999999997532100 0 0 00111113556677
Q ss_pred HHHHHhcC-cccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFD-LRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~-~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
....++.+ + .+..+++|.+++... +...|.+.++. ....+|.||+|+|..
T Consensus 221 ~~~l~~~g~v--~~~~~~~v~~i~~~~----------------------~~~~v~~~~g~----~~~~~d~vi~a~G~~ 271 (369)
T 3d1c_A 221 GNVIKQGARI--EMNVHYTVKDIDFNN----------------------GQYHISFDSGQ----SVHTPHEPILATGFD 271 (369)
T ss_dssp HHHHHTTCCE--EEECSCCEEEEEEET----------------------TEEEEEESSSC----CEEESSCCEECCCBC
T ss_pred HHHHhhCCcE--EEecCcEEEEEEecC----------------------CceEEEecCCe----EeccCCceEEeeccC
Confidence 77777775 8 788899999997654 34566665552 233469999999954
No 252
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.98 E-value=3.1e-05 Score=76.86 Aligned_cols=99 Identities=23% Similarity=0.331 Sum_probs=71.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.|.+|+++++.+.+.. .+ ...++.+.+
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------------------------------~~-~d~~~~~~l 220 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALI-------------------------------TL-EDQDIVNTL 220 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------------------------------TS-CCHHHHHHH
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCC-------------------------------CC-CCHHHHHHH
Confidence 6899999999999999999999999999999753310 00 013555555
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++..+ + .+.++++|.+++..+ .+...+.+.+ .+|...++.+|.||+|+|..
T Consensus 221 ~~~l~---v--~i~~~~~v~~i~~~~---------------------~~~v~v~~~~-~~G~~~~i~~D~vi~a~G~~ 271 (466)
T 3l8k_A 221 LSILK---L--NIKFNSPVTEVKKIK---------------------DDEYEVIYST-KDGSKKSIFTNSVVLAAGRR 271 (466)
T ss_dssp HHHHC---C--CEECSCCEEEEEEEE---------------------TTEEEEEECC-TTSCCEEEEESCEEECCCEE
T ss_pred HhcCE---E--EEEECCEEEEEEEcC---------------------CCcEEEEEEe-cCCceEEEEcCEEEECcCCC
Confidence 55443 5 788899999998743 1234555552 12344689999999999965
No 253
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.96 E-value=4e-05 Score=71.87 Aligned_cols=96 Identities=16% Similarity=0.142 Sum_probs=73.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|..|+.+|..|++.+.+++++++.+.+. ......
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~-----------------------------------~~~~~~-- 196 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFR-----------------------------------AHEHSV-- 196 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCS-----------------------------------SCHHHH--
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCC-----------------------------------ccHHHH--
Confidence 3689999999999999999999999999999865220 011111
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
..+++.++ .+..++++.+++... +...|.+.+..++...++.||.||+|+|..
T Consensus 197 --~~l~~~gv--~~~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~ 249 (332)
T 3lzw_A 197 --ENLHASKV--NVLTPFVPAELIGED----------------------KIEQLVLEEVKGDRKEILEIDDLIVNYGFV 249 (332)
T ss_dssp --HHHHHSSC--EEETTEEEEEEECSS----------------------SCCEEEEEETTSCCEEEEECSEEEECCCEE
T ss_pred --HHHhcCCe--EEEeCceeeEEecCC----------------------ceEEEEEEecCCCceEEEECCEEEEeeccC
Confidence 12456688 788899999998765 345677777555667889999999999965
No 254
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=97.96 E-value=2.3e-05 Score=77.11 Aligned_cols=49 Identities=20% Similarity=0.207 Sum_probs=38.9
Q ss_pred hhhhhccCcEEEeccCceeEecC--cEEEcCCceeeeccEEEEccCCCCCcc
Q 014821 330 FYDKVEEGSIILKKSQDFSFCED--GIVVDGQTTPLKTDLVILATGFKGDVK 379 (418)
Q Consensus 330 ~~~~~~~~~v~~~~~~v~~~~~~--~v~~~~g~~~~~~D~Vi~atG~~~~~~ 379 (418)
+.+.+++.+++++.+.+..++.+ .|.+++|++ +.+|.||+|||.++...
T Consensus 65 l~~~~~~~gv~~~~~~v~~id~~~~~V~~~~g~~-i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 65 IRHYVERKGIHFIAQSAEQIDAEAQNITLADGNT-VHYDYLMIATGPKLAFE 115 (437)
T ss_dssp CHHHHHTTTCEEECSCEEEEETTTTEEEETTSCE-EECSEEEECCCCEECGG
T ss_pred HHHHHHHCCCEEEEeEEEEEEcCCCEEEECCCCE-EECCEEEECCCCCcCcc
Confidence 34566667788888778888754 588899988 99999999999987743
No 255
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.95 E-value=1.3e-05 Score=75.70 Aligned_cols=97 Identities=16% Similarity=0.219 Sum_probs=68.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|..|+.+|..|++.+.+|+++++.+.+. ....+.
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-----------------------------------~~~~~~-- 197 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-----------------------------------ASKIML-- 197 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-----------------------------------SCTTHH--
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-----------------------------------ccHHHH--
Confidence 3689999999999999999999999999999865220 001111
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+...++.++ .+.+++++.+++.+. +...|.+.+..++...++.||.||+|+|..
T Consensus 198 -~~~~~~~gV--~v~~~~~v~~i~~~~----------------------~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 251 (335)
T 2a87_A 198 -DRARNNDKI--RFLTNHTVVAVDGDT----------------------TVTGLRVRDTNTGAETTLPVTGVFVAIGHE 251 (335)
T ss_dssp -HHHHHCTTE--EEECSEEEEEEECSS----------------------SCCEEEEEEETTSCCEEECCSCEEECSCEE
T ss_pred -HHHhccCCc--EEEeCceeEEEecCC----------------------cEeEEEEEEcCCCceEEeecCEEEEccCCc
Confidence 123345677 788899999998644 222355544323444689999999999965
No 256
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.94 E-value=7.2e-06 Score=82.01 Aligned_cols=41 Identities=34% Similarity=0.628 Sum_probs=38.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
+||+|||||++||++|..|++.|++|+|+|+++.+||....
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr~~t 80 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGRSWS 80 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTTCCE
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCccee
Confidence 79999999999999999999999999999999999987544
No 257
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.92 E-value=3.6e-05 Score=77.13 Aligned_cols=98 Identities=18% Similarity=0.202 Sum_probs=72.8
Q ss_pred cEEEEcCCHHHHHHHHHHHhC--------------CCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLK--------------GFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVT 70 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~--------------~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 70 (418)
.++|||||++|+.+|..|+.. ..+|+++|..+.+-
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il------------------------------- 267 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL------------------------------- 267 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------------------------------
Confidence 699999999999999988753 35799999976431
Q ss_pred CCCCChhHHHHHHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCC-CCceeEE
Q 014821 71 TDFPDHNQVLDYIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAK-NHSTEVH 149 (418)
Q Consensus 71 ~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~~~i 149 (418)
+.+ ..++.+++.+..++.|+ +++++++|++++.+. ..+.....+ ....+++
T Consensus 268 ~~~--~~~~~~~~~~~L~~~GV--~v~~~~~v~~v~~~~------------------------~~~~~~~~dg~~~~~~i 319 (502)
T 4g6h_A 268 NMF--EKKLSSYAQSHLENTSI--KVHLRTAVAKVEEKQ------------------------LLAKTKHEDGKITEETI 319 (502)
T ss_dssp TTS--CHHHHHHHHHHHHHTTC--EEETTEEEEEECSSE------------------------EEEEEECTTSCEEEEEE
T ss_pred cCC--CHHHHHHHHHHHHhcce--eeecCceEEEEeCCc------------------------eEEEEEecCcccceeee
Confidence 112 25788899999999999 899999999997544 233322221 1123579
Q ss_pred EeCEEEEeeccC
Q 014821 150 QVDFVILCVGRF 161 (418)
Q Consensus 150 ~~d~vIlAtG~~ 161 (418)
.||.||.|+|..
T Consensus 320 ~ad~viwa~Gv~ 331 (502)
T 4g6h_A 320 PYGTLIWATGNK 331 (502)
T ss_dssp ECSEEEECCCEE
T ss_pred ccCEEEEccCCc
Confidence 999999999965
No 258
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.91 E-value=3.8e-05 Score=71.48 Aligned_cols=97 Identities=18% Similarity=0.155 Sum_probs=70.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|+.|+.+|..|.+.+.+++++++.+.+. ... .+
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~-----------------------------------~~~---~~ 188 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFR-----------------------------------AAP---ST 188 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCB-----------------------------------SCH---HH
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCC-----------------------------------CCH---HH
Confidence 3689999999999999999999999999999965220 001 22
Q ss_pred HHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
++...++.++ .+.+++++.+++... +....|.+. ..+|...++.+|.||+|+|..
T Consensus 189 ~~~~~~~~gv--~~~~~~~v~~i~~~~---------------------~~~~~v~~~-~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 189 VEKVKKNEKI--ELITSASVDEVYGDK---------------------MGVAGVKVK-LKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp HHHHHHCTTE--EEECSCEEEEEEEET---------------------TEEEEEEEE-CTTSCEEEECCSCEEECSCEE
T ss_pred HHHHHhcCCe--EEEeCcEEEEEEcCC---------------------CcEEEEEEE-cCCCCeEEeecCeEEEEEcCC
Confidence 3344456788 888899999998754 122335555 223455689999999999965
No 259
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.90 E-value=8.8e-06 Score=78.24 Aligned_cols=42 Identities=29% Similarity=0.363 Sum_probs=39.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
++||+|||||++|+++|..|++.|.+|+|+|+++.+||....
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 42 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGGNAYT 42 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSGGGCE
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCcceEe
Confidence 379999999999999999999999999999999999998665
No 260
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.89 E-value=2.2e-05 Score=75.90 Aligned_cols=45 Identities=20% Similarity=0.234 Sum_probs=36.5
Q ss_pred hhhccCcEEEeccC-ceeEec--CcEEEcCCceeeeccEEEEccCCCCC
Q 014821 332 DKVEEGSIILKKSQ-DFSFCE--DGIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 332 ~~~~~~~v~~~~~~-v~~~~~--~~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
+.+++.+++++.+. +..++. ..|++++|++ +.+|.||+|||.++.
T Consensus 70 ~~~~~~~i~~~~~~~V~~id~~~~~v~~~~g~~-~~yd~lvlAtG~~p~ 117 (385)
T 3klj_A 70 DWYEKNNIKVITSEFATSIDPNNKLVTLKSGEK-IKYEKLIIASGSIAN 117 (385)
T ss_dssp HHHHHTTCEEECSCCEEEEETTTTEEEETTSCE-EECSEEEECCCEEEC
T ss_pred HHHHHCCCEEEeCCEEEEEECCCCEEEECCCCE-EECCEEEEecCCCcC
Confidence 45566789999885 878774 4588899998 999999999998765
No 261
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.87 E-value=2.4e-05 Score=69.99 Aligned_cols=33 Identities=18% Similarity=0.093 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.+|+|||+|.+|+++|..|+..+.. |+++.+..
T Consensus 4 ~dVvVVGgG~aGl~aA~~la~~g~~---v~lie~~~ 36 (232)
T 2cul_A 4 YQVLIVGAGFSGAETAFWLAQKGVR---VGLLTQSL 36 (232)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEecCC
Confidence 5799999999999999999998765 99999874
No 262
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.86 E-value=6.3e-05 Score=70.09 Aligned_cols=101 Identities=18% Similarity=0.234 Sum_probs=67.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.|.+|+++++.... ... .. ..
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~----------------------------------~~~-~~---~~ 194 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAF----------------------------------RAS-KT---MQ 194 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSC----------------------------------CSC-HH---HH
T ss_pred CeEEEECCChHHHHHHHHHHHhCCeeeeecccccc----------------------------------ccc-ch---hh
Confidence 68999999999999999999999999999985411 011 11 11
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccCCC
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRFSD 163 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~~~ 163 (418)
.......+. .......+..+.... ...-.+.+.+...+..+++.+|.|++|+|..
T Consensus 195 ~~~~~~~~~--~~~~~~~~~~i~~~~---------------------~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~-- 249 (314)
T 4a5l_A 195 ERVLNHPKI--EVIWNSELVELEGDG---------------------DLLNGAKIHNLVSGEYKVVPVAGLFYAIGHS-- 249 (314)
T ss_dssp HHHHTCTTE--EEECSEEEEEEEESS---------------------SSEEEEEEEETTTCCEEEEECSEEEECSCEE--
T ss_pred hhhhcccce--eeEeeeeeEEEEeee---------------------eccceeEEeecccccceeeccccceEecccc--
Confidence 222223344 455666777776654 1222344555445666899999999999954
Q ss_pred CCCCC
Q 014821 164 VPNIP 168 (418)
Q Consensus 164 ~p~~p 168 (418)
|+..
T Consensus 250 -pn~~ 253 (314)
T 4a5l_A 250 -PNSK 253 (314)
T ss_dssp -ESCG
T ss_pred -cChh
Confidence 6554
No 263
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.86 E-value=6.5e-05 Score=78.31 Aligned_cols=98 Identities=15% Similarity=0.141 Sum_probs=71.4
Q ss_pred ccEEEEc--CCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 4 KQIAIVG--AGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 4 ~~vvIIG--~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
++|+||| +|+.|+.+|..|.+.|.+|+++++.+.+..... ......
T Consensus 524 ~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~~~--------------------------------~~~~~~ 571 (690)
T 3k30_A 524 KKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSWTN--------------------------------NTFEVN 571 (690)
T ss_dssp SEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGGGG--------------------------------GGTCHH
T ss_pred CEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccccc--------------------------------cchhHH
Confidence 5799999 999999999999999999999999764321100 012244
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
.+.+.+++.++ ++..+++|++++.+. ..+.. ..++...++.||.||+|+|..
T Consensus 572 ~l~~~l~~~GV--~i~~~~~V~~i~~~~------------------------~~v~~--~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 572 RIQRRLIENGV--ARVTDHAVVAVGAGG------------------------VTVRD--TYASIERELECDAVVMVTARL 623 (690)
T ss_dssp HHHHHHHHTTC--EEEESEEEEEEETTE------------------------EEEEE--TTTCCEEEEECSEEEEESCEE
T ss_pred HHHHHHHHCCC--EEEcCcEEEEEECCe------------------------EEEEE--ccCCeEEEEECCEEEECCCCC
Confidence 56666777898 899999999997543 22322 222344689999999999954
No 264
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.86 E-value=6.9e-05 Score=69.05 Aligned_cols=33 Identities=18% Similarity=0.143 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.+|+|||+|.+|+.+|..|...+.. |+++.++.
T Consensus 3 ~~vvIIG~G~aGl~aA~~l~~~g~~---v~lie~~~ 35 (297)
T 3fbs_A 3 FDVIIIGGSYAGLSAALQLGRARKN---ILLVDAGE 35 (297)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEECCC
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 4799999999999999999998765 99999754
No 265
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.84 E-value=0.00019 Score=73.55 Aligned_cols=103 Identities=17% Similarity=0.139 Sum_probs=71.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||||+.|+.+|..|++.|.+|+++++. .+. ..+ ..++..++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~l-------------------------------~~~--d~~~~~~~ 332 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-ILL-------------------------------RGF--DQQMAEKV 332 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CSS-------------------------------TTS--CHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cCc-------------------------------CcC--CHHHHHHH
Confidence 57999999999999999999999999999985 110 001 14567777
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEc-----CCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEee
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFE-----GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCV 158 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAt 158 (418)
.+..++.|+ .+.+++.+..+... . +. ..+...+.+... ++....+.+|.||+|+
T Consensus 333 ~~~l~~~gv--~i~~~~~v~~v~~~~~~~~~--~~----------------~~~~~~v~~~~~-~g~~~~~~~D~vi~a~ 391 (598)
T 2x8g_A 333 GDYMENHGV--KFAKLCVPDEIKQLKVVDTE--NN----------------KPGLLLVKGHYT-DGKKFEEEFETVIFAV 391 (598)
T ss_dssp HHHHHHTTC--EEEETEEEEEEEEEECCBTT--TT----------------BCCEEEEEEEET-TSCEEEEEESEEEECS
T ss_pred HHHHHhCCC--EEEECCeEEEEEeccccccc--cC----------------CCceEEEEEEeC-CCcEEeccCCEEEEEe
Confidence 778888898 88988888887653 1 00 012344443221 2333456699999999
Q ss_pred ccC
Q 014821 159 GRF 161 (418)
Q Consensus 159 G~~ 161 (418)
|..
T Consensus 392 G~~ 394 (598)
T 2x8g_A 392 GRE 394 (598)
T ss_dssp CEE
T ss_pred CCc
Confidence 965
No 266
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.84 E-value=0.00011 Score=73.98 Aligned_cols=97 Identities=16% Similarity=0.209 Sum_probs=71.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHH
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDY 82 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (418)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.+. . . .+
T Consensus 355 ~k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~----------------------------------~--~---~~ 395 (521)
T 1hyu_A 355 GKRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK----------------------------------A--D---QV 395 (521)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC----------------------------------S--C---HH
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC----------------------------------c--C---HH
Confidence 3689999999999999999999999999999865221 0 0 23
Q ss_pred HHHHHHh-cCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 83 IQSYASH-FDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 83 l~~~~~~-~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+.+.+.+ .++ .+..++.++++..+. +....|.+.+..+|...++.+|.||+|+|..
T Consensus 396 l~~~l~~~~gV--~v~~~~~v~~i~~~~---------------------~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 396 LQDKVRSLKNV--DIILNAQTTEVKGDG---------------------SKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp HHHHHTTCTTE--EEECSEEEEEEEECS---------------------SSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred HHHHHhcCCCc--EEEeCCEEEEEEcCC---------------------CcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 3444444 477 788999999998654 1222466665444666789999999999954
No 267
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.83 E-value=1.4e-05 Score=79.10 Aligned_cols=43 Identities=21% Similarity=0.318 Sum_probs=40.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
+.+||+|||+|.+|+++|..|++.|.+|+++|+++.+||.+..
T Consensus 19 ~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg~~~s 61 (475)
T 3p1w_A 19 EHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGGETAS 61 (475)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCCCccc
Confidence 4589999999999999999999999999999999999997665
No 268
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.82 E-value=1.6e-05 Score=78.17 Aligned_cols=42 Identities=12% Similarity=0.297 Sum_probs=39.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||+|++|+++|..|++.|++|+++|+++.+||.+..
T Consensus 6 ~~~v~iiG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~s 47 (433)
T 1d5t_A 6 EYDVIVLGTGLTECILSGIMSVNGKKVLHMDRNPYYGGESSS 47 (433)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTSCE
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEecCCCccccccc
Confidence 589999999999999999999999999999999999998766
No 269
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.79 E-value=1.3e-05 Score=80.09 Aligned_cols=41 Identities=39% Similarity=0.491 Sum_probs=38.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCcccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWI 43 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~ 43 (418)
.+||+|||||++||++|..|++.|.+|+|+|+++++||.+.
T Consensus 33 ~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~~~ 73 (498)
T 2iid_A 33 PKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGRVR 73 (498)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTTCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcee
Confidence 57999999999999999999999999999999999998654
No 270
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.77 E-value=2.1e-05 Score=78.20 Aligned_cols=42 Identities=38% Similarity=0.597 Sum_probs=38.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||||++|+++|..|.+.|. +|+|+|+++.+||.+..
T Consensus 4 ~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg~~~~ 46 (472)
T 1b37_A 4 GPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGGRMHK 46 (472)
T ss_dssp -CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBTTSCE
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCCceee
Confidence 5799999999999999999999998 89999999999997765
No 271
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=97.71 E-value=7e-05 Score=72.89 Aligned_cols=107 Identities=13% Similarity=0.080 Sum_probs=69.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhh---hcCCCCCeEEEEecCcccccCCCCCCCcchhhhhhHHHHHhhcCCCchhHHHHHHh
Q 014821 204 KRVTVVGLQKSALDIAMECTT---ANGLENPCTVLYRTEHWNIPDYFPWGFPLAYLYLNRFAELLVHKPGEGFLLSLLAT 280 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~---~~~~~~~V~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (418)
++|+|||+|.+|+.+|..|.+ .+.. |+++.+++.+.......+
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~---V~vie~~~~~~~~~~~~~------------------------------- 47 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKAD---VKVINKSRFSYFRPALPH------------------------------- 47 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSE---EEEEESSSEEEECCSSCC-------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCe---EEEEeCCCCceeccchhh-------------------------------
Confidence 589999999999999999998 5554 999999875322111000
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhcccCCCCCcccccccccccccccCcchhhhhccCcEEEeccCceeEecC--cEEEcC
Q 014821 281 MLSPLRWAISKFVEADIKKKHRLAKFGMVPKHSFLQELSSCLTITVPEKFYDKVEEGSIILKKSQDFSFCED--GIVVDG 358 (418)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~~~~~--~v~~~~ 358 (418)
..... .....+...+.+.+++.+++++.+.+..++.+ .|.+++
T Consensus 48 ---------------------------~~~~~--------~~~~~~~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~~~ 92 (409)
T 3h8l_A 48 ---------------------------VAIGV--------RDVDELKVDLSEALPEKGIQFQEGTVEKIDAKSSMVYYTK 92 (409)
T ss_dssp ---------------------------CCSSC--------CCCCCEEEEHHHHTGGGTCEEEECEEEEEETTTTEEEEEC
T ss_pred ---------------------------cccCC--------cCHHHHHHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEEcc
Confidence 00000 00001122344566666788888777777654 577776
Q ss_pred Cc---eeeeccEEEEccCCCCCcc
Q 014821 359 QT---TPLKTDLVILATGFKGDVK 379 (418)
Q Consensus 359 g~---~~~~~D~Vi~atG~~~~~~ 379 (418)
|+ ..+.+|.||+|||.++...
T Consensus 93 g~~~~~~~~~d~lViAtG~~~~~~ 116 (409)
T 3h8l_A 93 PDGSMAEEEYDYVIVGIGAHLATE 116 (409)
T ss_dssp TTSCEEEEECSEEEECCCCEECGG
T ss_pred CCcccceeeCCEEEECCCCCcCcc
Confidence 64 2389999999999987643
No 272
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=97.70 E-value=7.5e-05 Score=73.23 Aligned_cols=47 Identities=17% Similarity=0.127 Sum_probs=37.3
Q ss_pred hhhhccCcEEEeccCceeEecC--cEEEcCCceeeeccEEEEccCCCCCc
Q 014821 331 YDKVEEGSIILKKSQDFSFCED--GIVVDGQTTPLKTDLVILATGFKGDV 378 (418)
Q Consensus 331 ~~~~~~~~v~~~~~~v~~~~~~--~v~~~~g~~~~~~D~Vi~atG~~~~~ 378 (418)
.+.+++.+++++.+.+..++.+ .|.+++|++ +.+|.||+|||.++..
T Consensus 63 ~~~~~~~gv~~~~~~v~~id~~~~~v~~~~g~~-i~~d~liiAtG~~~~~ 111 (430)
T 3h28_A 63 APLLPKFNIEFINEKAESIDPDANTVTTQSGKK-IEYDYLVIATGPKLVF 111 (430)
T ss_dssp TTTGGGGTEEEECSCEEEEETTTTEEEETTCCE-EECSEEEECCCCEEEC
T ss_pred HHHHHhcCCEEEEEEEEEEECCCCEEEECCCcE-EECCEEEEcCCccccc
Confidence 3455666789888878888754 588889988 9999999999988653
No 273
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.66 E-value=4.1e-05 Score=73.18 Aligned_cols=34 Identities=26% Similarity=0.500 Sum_probs=32.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++||+|||||++|+++|+.|+++|.+|+|||+..
T Consensus 6 ~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 6 QKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 5899999999999999999999999999999965
No 274
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.59 E-value=3.5e-05 Score=75.66 Aligned_cols=33 Identities=36% Similarity=0.543 Sum_probs=31.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+||+|||||++|+++|..|+++|++|+|||+.+
T Consensus 23 ~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~ 55 (430)
T 3ihm_A 23 KRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRK 55 (430)
T ss_dssp CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCC
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCC
Confidence 699999999999999999999999999999975
No 275
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.54 E-value=5.7e-05 Score=78.36 Aligned_cols=42 Identities=36% Similarity=0.583 Sum_probs=38.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||||++|+++|..|.+.|++|+|+|+++.+||.+..
T Consensus 107 ~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg~~~~ 148 (662)
T 2z3y_A 107 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 148 (662)
T ss_dssp CCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBTTCCE
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCCcccc
Confidence 479999999999999999999999999999999999986554
No 276
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.52 E-value=6.7e-05 Score=79.53 Aligned_cols=42 Identities=36% Similarity=0.583 Sum_probs=38.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.++|+|||||++||++|..|++.|++|+|||+++.+||.+..
T Consensus 278 ~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~~~~ 319 (852)
T 2xag_A 278 TGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGRVAT 319 (852)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTTCCE
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCceee
Confidence 479999999999999999999999999999999999986443
No 277
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.51 E-value=4.5e-05 Score=72.54 Aligned_cols=33 Identities=24% Similarity=0.388 Sum_probs=31.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCC------CceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKG------FHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~------~~v~iie~~~ 36 (418)
+||+|||||++|+++|+.|+++| .+|+|+|+..
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 48999999999999999999997 8999999975
No 278
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=97.49 E-value=9.6e-05 Score=70.57 Aligned_cols=35 Identities=34% Similarity=0.474 Sum_probs=32.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
+||+|||||++|+.+|..|++.|.+|+|+|+++..
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~ 36 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKR 36 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTS
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCc
Confidence 79999999999999999999999999999997744
No 279
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.47 E-value=0.00037 Score=69.00 Aligned_cols=34 Identities=18% Similarity=0.130 Sum_probs=31.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|||+|.+|+.+|..|++.+.+|+++++++
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~ 230 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRT 230 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSS
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECC
Confidence 3689999999999999999999999999999875
No 280
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.47 E-value=0.00066 Score=63.16 Aligned_cols=34 Identities=18% Similarity=0.272 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|||||+.|+.+|..|++.|.+|+|+++.+
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 3689999999999999999999999999999975
No 281
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.36 E-value=0.00041 Score=72.70 Aligned_cols=69 Identities=10% Similarity=0.047 Sum_probs=51.1
Q ss_pred ccEEEEc--CCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHH
Q 014821 4 KQIAIVG--AGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLD 81 (418)
Q Consensus 4 ~~vvIIG--~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (418)
++|+||| ||..|+.+|..|++.|.+|+++++.+ +.... .++. . ..
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~-l~~~~-----------------------------~~~~--~-~~ 575 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH-LANYM-----------------------------HFTL--E-YP 575 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC-TTHHH-----------------------------HHTT--C-HH
T ss_pred CeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc-ccccc-----------------------------cccc--c-HH
Confidence 5899999 99999999999999999999999965 32100 0000 1 23
Q ss_pred HHHHHHHhcCcccceEeeeEEEEEEE
Q 014821 82 YIQSYASHFDLRKHIKFNRKVVGIEF 107 (418)
Q Consensus 82 ~l~~~~~~~~~~~~v~~~~~v~~i~~ 107 (418)
.+.+..++.|+ ++.+++++.+++.
T Consensus 576 ~~~~~l~~~GV--~i~~~~~v~~i~~ 599 (729)
T 1o94_A 576 NMMRRLHELHV--EELGDHFCSRIEP 599 (729)
T ss_dssp HHHHHHHHTTC--EEECSEEEEEEET
T ss_pred HHHHHHHhCCC--EEEcCcEEEEEEC
Confidence 45555667788 8999999999874
No 282
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.36 E-value=0.00042 Score=68.23 Aligned_cols=34 Identities=15% Similarity=0.003 Sum_probs=31.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCc-eEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFH-PIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~-v~iie~~~ 36 (418)
.++|+|||+|.+|+.+|..|++.+.+ |+++++.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 46899999999999999999999998 99999864
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.34 E-value=0.00063 Score=73.49 Aligned_cols=93 Identities=19% Similarity=0.141 Sum_probs=68.3
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccccCCcceecCCccccccCCCCCCCCCCCCCCChhHHHHHH
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIKTVETTMLQTPKQLYQFSDYPWPDSVTTDFPDHNQVLDYI 83 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (418)
++|+|||+|+.|+.+|..|++.|.+|+|+++.+.+. ..
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------------------------------------~~----- 322 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------------------------------------AA----- 322 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-------------------------------------HH-----
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-------------------------------------hh-----
Confidence 689999999999999999999999999999965220 01
Q ss_pred HHHHHhcCcccceEeeeEEEEEEEc-CCCCcccccccccCCCCCCCCCCCceEEEEec--CC--CCceeEEEeCEEEEee
Q 014821 84 QSYASHFDLRKHIKFNRKVVGIEFE-GLSGEDEKSWSFWNGNGQPFGSRGKWTVAVED--AK--NHSTEVHQVDFVILCV 158 (418)
Q Consensus 84 ~~~~~~~~~~~~v~~~~~v~~i~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~--~~~~~~i~~d~vIlAt 158 (418)
.+.+++.++ .+++++.+.++... . +....|.+.+ .. +|...++.||.||+|+
T Consensus 323 ~~~l~~~GV--~v~~~~~v~~i~~~~~---------------------~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~ 379 (965)
T 2gag_A 323 AAQAVADGV--QVISGSVVVDTEADEN---------------------GELSAIVVAELDEARELGGTQRFEADVLAVAG 379 (965)
T ss_dssp HHHHHHTTC--CEEETEEEEEEEECTT---------------------SCEEEEEEEEECTTCCEEEEEEEECSEEEEEC
T ss_pred HHHHHhCCe--EEEeCCEeEEEeccCC---------------------CCEEEEEEEeccccCCCCceEEEEcCEEEECC
Confidence 234566788 89999999999873 2 1222355543 10 1334689999999999
Q ss_pred ccC
Q 014821 159 GRF 161 (418)
Q Consensus 159 G~~ 161 (418)
|..
T Consensus 380 G~~ 382 (965)
T 2gag_A 380 GFN 382 (965)
T ss_dssp CEE
T ss_pred CcC
Confidence 954
No 284
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.33 E-value=0.00023 Score=70.37 Aligned_cols=33 Identities=15% Similarity=0.309 Sum_probs=30.2
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
++|+|||||..|+-+|..+.+.|. +|+++++++
T Consensus 265 k~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 265 KHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 689999999999999999999987 599999865
No 285
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=97.30 E-value=0.00028 Score=66.62 Aligned_cols=33 Identities=18% Similarity=0.201 Sum_probs=29.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|||+|.+|+.+|..|++.+ +++++.+..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 368999999999999999999988 699998863
No 286
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.30 E-value=0.0014 Score=60.79 Aligned_cols=33 Identities=12% Similarity=0.123 Sum_probs=28.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
.-.|+|||+|+.|+.+|..|+..+.. |+++.+.
T Consensus 6 ~yDVvIIGaGpAGlsAA~~lar~g~~---v~lie~~ 38 (304)
T 4fk1_A 6 YIDCAVIGAGPAGLNASLVLGRARKQ---IALFDNN 38 (304)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEECS
T ss_pred CcCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 45799999999999999999887764 9999875
No 287
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.24 E-value=0.00093 Score=65.96 Aligned_cols=35 Identities=20% Similarity=0.392 Sum_probs=29.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--------------------CC-ceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--------------------GF-HPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--------------------~~-~v~iie~~~~ 37 (418)
.++|+|||+|..|+.+|..|++. +. +|+|++++..
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~ 202 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGP 202 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCCh
Confidence 36899999999999999999874 54 8999999763
No 288
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.23 E-value=0.00061 Score=68.76 Aligned_cols=35 Identities=20% Similarity=0.329 Sum_probs=32.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
.++|+|||+|.+|+.+|..|++.+.+|+++++.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 47899999999999999999999999999999874
No 289
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=97.23 E-value=0.0004 Score=66.66 Aligned_cols=50 Identities=10% Similarity=0.166 Sum_probs=38.1
Q ss_pred CcchhhhhccCcEEEeccC-ceeEecC-cEEEcCCceeeeccEEEEccCCCCC
Q 014821 327 PEKFYDKVEEGSIILKKSQ-DFSFCED-GIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 327 ~~~~~~~~~~~~v~~~~~~-v~~~~~~-~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
...+.+.+++.+++++.+. +..++.+ .|++++|++ +.+|.||.|+|..+.
T Consensus 110 ~~~L~~~~~~~gv~i~~~~~v~~i~~~~~v~~~~g~~-~~ad~vV~AdG~~s~ 161 (379)
T 3alj_A 110 HDALVNRARALGVDISVNSEAVAADPVGRLTLQTGEV-LEADLIVGADGVGSK 161 (379)
T ss_dssp HHHHHHHHHHTTCEEESSCCEEEEETTTEEEETTSCE-EECSEEEECCCTTCH
T ss_pred HHHHHHHHHhcCCEEEeCCEEEEEEeCCEEEECCCCE-EEcCEEEECCCccHH
Confidence 3345566666778998886 6666533 677888988 999999999999865
No 290
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.23 E-value=0.0013 Score=64.88 Aligned_cols=34 Identities=21% Similarity=0.240 Sum_probs=30.0
Q ss_pred CccEEEEcCCHHHHHHHHHHH--------------------hCCC-ceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLL--------------------LKGF-HPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~--------------------~~~~-~v~iie~~~ 36 (418)
.++|+|||+|..|+.+|..|+ +.+. +|+|++++.
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~ 199 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRG 199 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCC
Confidence 368999999999999999999 5677 799999975
No 291
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.20 E-value=0.00091 Score=64.56 Aligned_cols=49 Identities=10% Similarity=0.137 Sum_probs=36.7
Q ss_pred cchhhhhccC-cEEEeccC-ceeEec--C----cEEEcCCceeeeccEEEEccCCCCC
Q 014821 328 EKFYDKVEEG-SIILKKSQ-DFSFCE--D----GIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 328 ~~~~~~~~~~-~v~~~~~~-v~~~~~--~----~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
..+.+.+++. +++++.+. +..++. + .|++++|++ +++|.||.|+|..+.
T Consensus 111 ~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~-~~ad~vV~AdG~~s~ 167 (399)
T 2x3n_A 111 RLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRV-LRPRVVVGADGIASY 167 (399)
T ss_dssp HHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCE-EEEEEEEECCCTTCH
T ss_pred HHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCE-EECCEEEECCCCChH
Confidence 3445666665 79998886 766653 2 466778887 999999999999865
No 292
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.20 E-value=0.00035 Score=69.88 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=32.0
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 201 ~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
....+|+|||+|.+|+.+|..|...|.. |+++.+.+.
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~---V~liEk~~~ 126 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGAR---VVLVEKRIK 126 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCSS
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCe---EEEEEeccc
Confidence 3467899999999999999999998764 999998764
No 293
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.20 E-value=0.00077 Score=69.98 Aligned_cols=29 Identities=28% Similarity=0.386 Sum_probs=25.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEE
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIV 31 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~i 31 (418)
.++|+|||||..|+.+|..|++.|.++++
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~~G~~vtv 522 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQPGESTSQ 522 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTCCSSCGGG
T ss_pred CCeEEEECCChhHHHHHHHHHhcCCCccc
Confidence 36899999999999999999998876543
No 294
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=97.17 E-value=0.00065 Score=66.26 Aligned_cols=35 Identities=14% Similarity=0.207 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..+|+|||+|.+|+.+|..|++.|.. |+++.+.+.
T Consensus 27 ~~dViIIGgG~AGl~aA~~La~~G~~---V~llEk~~~ 61 (417)
T 3v76_A 27 KQDVVIIGAGAAGMMCAIEAGKRGRR---VLVIDHARA 61 (417)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 46899999999999999999998765 999998763
No 295
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.09 E-value=0.00018 Score=74.50 Aligned_cols=36 Identities=31% Similarity=0.388 Sum_probs=33.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC--------CceEEEeeCC-CC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG--------FHPIVFEARS-DI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~--------~~v~iie~~~-~~ 38 (418)
.++|+|||||++||++|..|.+.| ++|+|||+++ ++
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 478999999999999999999988 8999999998 88
No 296
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.99 E-value=0.0025 Score=69.36 Aligned_cols=33 Identities=15% Similarity=0.206 Sum_probs=30.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
.+|+|||||..|+.+|..|++.|. +|+++++.+
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~ 366 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG 366 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecC
Confidence 489999999999999999999996 899999964
No 297
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=96.98 E-value=0.0012 Score=66.60 Aligned_cols=49 Identities=20% Similarity=0.217 Sum_probs=37.7
Q ss_pred cchhhhhccCcEEEeccC-ceeEec--C---cEEEcCCceeeeccEEEEccCCCCC
Q 014821 328 EKFYDKVEEGSIILKKSQ-DFSFCE--D---GIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 328 ~~~~~~~~~~~v~~~~~~-v~~~~~--~---~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
..+.+.+++.+++++.+. +..+.. + +|.+++|++ +.+|.||+|+|..+.
T Consensus 224 ~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~~G~~-i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 224 EKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLSNGEE-IKSRHVVLAVGHSAR 278 (549)
T ss_dssp HHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEETTSCE-EECSCEEECCCTTCH
T ss_pred HHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEECCCCE-EECCEEEECCCCChh
Confidence 345566677789999886 666642 2 277888988 999999999999875
No 298
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.98 E-value=0.0033 Score=63.47 Aligned_cols=35 Identities=17% Similarity=0.342 Sum_probs=32.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
.++|+|||+|++|+.+|..|++.+.+|++|++.+.
T Consensus 185 ~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 46899999999999999999999999999999874
No 299
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=96.97 E-value=0.00055 Score=69.23 Aligned_cols=36 Identities=28% Similarity=0.382 Sum_probs=33.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
..+|++|||+|++|+.+|.+|++.|.+|+|+|+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGKKVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCCeEEEEeCCCC
Confidence 358999999999999999999999999999999763
No 300
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=96.91 E-value=0.0017 Score=63.88 Aligned_cols=48 Identities=13% Similarity=0.281 Sum_probs=36.5
Q ss_pred cchhhhhccCcEEEeccC-ceeEe--cCc---EEEcCCceeeeccEEEEccCCCC
Q 014821 328 EKFYDKVEEGSIILKKSQ-DFSFC--EDG---IVVDGQTTPLKTDLVILATGFKG 376 (418)
Q Consensus 328 ~~~~~~~~~~~v~~~~~~-v~~~~--~~~---v~~~~g~~~~~~D~Vi~atG~~~ 376 (418)
+.+.+.+++.+|+++.+. +..+. ++. |.+++|++ +.+|.||+|||..+
T Consensus 138 ~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~~-i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 138 DALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGEV-LETNHVVIAVGGKS 191 (447)
T ss_dssp HHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCCE-EECSCEEECCCCSS
T ss_pred HHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCCE-EECCEEEECCCCCc
Confidence 345566677789998876 66664 333 67788887 99999999999887
No 301
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=96.87 E-value=0.00068 Score=68.12 Aligned_cols=35 Identities=29% Similarity=0.362 Sum_probs=32.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHh-CCCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie~~~~ 37 (418)
.+|+||||+|++|+.+|.+|++ .+.+|+|||+...
T Consensus 17 ~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 17 NCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 4899999999999999999998 6789999999764
No 302
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=96.79 E-value=0.0012 Score=63.70 Aligned_cols=35 Identities=29% Similarity=0.244 Sum_probs=31.1
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..+|+|||+|.+|+-+|..|...|.. |+++.+.+.
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~ 39 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVD---VDVYERSPQ 39 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCC---EEEEecCCC
Confidence 46899999999999999999998765 999998764
No 303
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=96.79 E-value=0.001 Score=66.50 Aligned_cols=38 Identities=13% Similarity=0.178 Sum_probs=34.5
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIG 39 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~g 39 (418)
..+|++|||+|++|+.+|..|++.+.+|+|+|+....+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCC
Confidence 46899999999999999999999999999999987543
No 304
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=96.71 E-value=0.00093 Score=67.88 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=32.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~~ 37 (418)
.+|+||||||.||+.+|.+|++.+ .+|+|||+.+.
T Consensus 6 ~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 6 HFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp EEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred cccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 589999999999999999999987 69999999875
No 305
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=96.69 E-value=0.00075 Score=68.09 Aligned_cols=35 Identities=29% Similarity=0.279 Sum_probs=32.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
.+|+||||+|.+|+.+|.+|++ +.+|+|+|+....
T Consensus 26 ~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 26 SYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 4799999999999999999999 9999999998654
No 306
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=96.69 E-value=0.0032 Score=57.83 Aligned_cols=35 Identities=23% Similarity=0.287 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhh-cCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTA-NGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~-~~~~~~V~~~~r~~~ 240 (418)
...|+|||+|.+|+.+|..|++. +. +|+++.+.+.
T Consensus 39 ~~dVvIIGgG~aGl~aA~~la~~~G~---~V~viEk~~~ 74 (284)
T 1rp0_A 39 ETDVVVVGAGSAGLSAAYEISKNPNV---QVAIIEQSVS 74 (284)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTSTTS---CEEEEESSSS
T ss_pred ccCEEEECccHHHHHHHHHHHHcCCC---eEEEEECCCC
Confidence 45799999999999999999985 65 4999998763
No 307
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=96.66 E-value=0.0027 Score=61.54 Aligned_cols=34 Identities=15% Similarity=0.126 Sum_probs=30.0
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.+|+|||+|.+|+.+|..|++.|.. |+++.+.+.
T Consensus 5 ~dViIIGgG~aGl~aA~~la~~G~~---V~vlEk~~~ 38 (401)
T 2gqf_A 5 SENIIIGAGAAGLFCAAQLAKLGKS---VTVFDNGKK 38 (401)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCEEEECCcHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 4699999999999999999998765 999998763
No 308
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=96.66 E-value=0.002 Score=62.42 Aligned_cols=37 Identities=16% Similarity=0.173 Sum_probs=31.3
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 201 ~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.+..+|+|||+|.+|+-+|..|+..|.. |+++.|.+.
T Consensus 21 ~~~~dV~IVGaG~aGl~~A~~La~~G~~---V~v~E~~~~ 57 (407)
T 3rp8_A 21 QGHMKAIVIGAGIGGLSAAVALKQSGID---CDVYEAVKE 57 (407)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESSSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 4467899999999999999999998765 999998763
No 309
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=96.64 E-value=0.0019 Score=65.34 Aligned_cols=34 Identities=15% Similarity=0.053 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..+|+|||+|.+|+.+|..|.+.+.. |+++.+++
T Consensus 21 ~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~ 54 (549)
T 4ap3_A 21 SYDVVVVGAGIAGLYAIHRFRSQGLT---VRAFEAAS 54 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCEEEECchHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 35799999999999999999987765 99999865
No 310
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=96.62 E-value=0.0048 Score=57.69 Aligned_cols=33 Identities=15% Similarity=0.233 Sum_probs=29.7
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.+|+|||+|.+|+-+|..|+..|.. |+++.+++
T Consensus 3 ~dV~IIGaG~~Gl~~A~~L~~~G~~---V~vlE~~~ 35 (336)
T 1yvv_A 3 VPIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSR 35 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred ceEEEECCcHHHHHHHHHHHHCCCc---EEEEECCC
Confidence 4799999999999999999998765 99999875
No 311
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=96.61 E-value=0.019 Score=58.21 Aligned_cols=35 Identities=17% Similarity=0.213 Sum_probs=30.6
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
...|+|||+|.+|+.+|..|++.|.. |.++.+.+.
T Consensus 126 ~~DVvVVGaG~aGl~aA~~la~~G~~---V~vlEk~~~ 160 (571)
T 1y0p_A 126 TVDVVVVGSGGAGFSAAISATDSGAK---VILIEKEPV 160 (571)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 35799999999999999999998865 999998763
No 312
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=96.60 E-value=0.0016 Score=66.38 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=33.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHh-CCCceEEEeeCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDI 38 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie~~~~~ 38 (418)
..+|++|||+|++|+.+|..|++ .+.+|+++|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 46899999999999999999999 79999999997643
No 313
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.60 E-value=0.002 Score=65.73 Aligned_cols=42 Identities=19% Similarity=0.408 Sum_probs=40.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCCCccccc
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDIGGAWIK 44 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~gg~~~~ 44 (418)
.+||+|||+|..|..+|..|++.|++|+++|+++..||.|..
T Consensus 8 ~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg~~~~ 49 (650)
T 1vg0_A 8 DFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGGNWAS 49 (650)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCE
T ss_pred cCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccCcccc
Confidence 589999999999999999999999999999999999998776
No 314
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=96.54 E-value=0.0015 Score=66.45 Aligned_cols=34 Identities=26% Similarity=0.396 Sum_probs=31.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC-CCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~-~~~v~iie~~~ 36 (418)
.+|+||||||.||+.+|.+|++. +.+|+|||+.+
T Consensus 19 ~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 19 TVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 58999999999999999999974 78999999987
No 315
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=96.54 E-value=0.0019 Score=64.59 Aligned_cols=35 Identities=20% Similarity=0.340 Sum_probs=32.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
.+|++|||+|++|+.+|..|++.+.+|+|+|+...
T Consensus 11 ~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~~ 45 (507)
T 1coy_A 11 RVPALVIGSGYGGAVAALRLTQAGIPTQIVEMGRS 45 (507)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCC
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCC
Confidence 58999999999999999999999999999999764
No 316
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.53 E-value=0.0092 Score=60.96 Aligned_cols=34 Identities=15% Similarity=0.130 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...|+|||+|..|+++|..|+..|.. |.++.++.
T Consensus 28 ~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~ 61 (651)
T 3ces_A 28 PFDVIIIGGGHAGTEAAMAAARMGQQ---TLLLTHNI 61 (651)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred cCCEEEECChHHHHHHHHHHHhCCCC---EEEEeecc
Confidence 35799999999999999999998765 99999874
No 317
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=96.46 E-value=0.0044 Score=60.07 Aligned_cols=33 Identities=12% Similarity=0.065 Sum_probs=29.6
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.+|+|||+|.+|.-+|..|++.|.. |+++.+..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~---V~v~E~~~ 38 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFK---VKIVEKQK 38 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSC
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 5799999999999999999988765 99999875
No 318
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=96.39 E-value=0.019 Score=57.16 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=29.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~ 36 (418)
-++|+|||+|.+|+.++..|++. +.+|+++-|.+
T Consensus 246 gKrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~ 281 (501)
T 4b63_A 246 PYNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDS 281 (501)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSS
T ss_pred CcEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCC
Confidence 36899999999999999999875 67899999875
No 319
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=96.36 E-value=0.0046 Score=63.03 Aligned_cols=35 Identities=11% Similarity=0.125 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 202 ~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...+|+|||||.+|.-+|..|+..|.. |+++.+.+
T Consensus 22 ~~~DVvIVGgG~AGl~aA~~Lar~G~~---V~LiEr~~ 56 (591)
T 3i3l_A 22 TRSKVAIIGGGPAGSVAGLTLHKLGHD---VTIYERSA 56 (591)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCE---EEEECSSC
T ss_pred CCCCEEEECcCHHHHHHHHHHHcCCCC---EEEEcCCC
Confidence 357899999999999999999998764 99999874
No 320
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=96.32 E-value=0.0019 Score=65.37 Aligned_cols=36 Identities=25% Similarity=0.267 Sum_probs=32.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHh-CCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLL-KGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~-~~~~v~iie~~~~~ 38 (418)
.+|++|||||.+|+.+|.+|++ .+.+|+|||+.+..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 4899999999999999999998 68999999998654
No 321
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=96.30 E-value=0.0073 Score=58.20 Aligned_cols=35 Identities=20% Similarity=0.163 Sum_probs=30.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..+|+|||+|.+|+-+|..|...|.. |+++.|.+.
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~---v~v~E~~~~ 60 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGID---VSVYERDND 60 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCE---EEEEECSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 46899999999999999999988765 999998764
No 322
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.29 E-value=0.0068 Score=61.87 Aligned_cols=35 Identities=17% Similarity=0.206 Sum_probs=30.6
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 202 ~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
....|+|||+|..|+++|..|+..|.. |.++.++.
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr~G~k---VlLIEk~~ 54 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVARGGLH---CLLITSDL 54 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred CcCCEEEECccHHHHHHHHHHHHCCCc---EEEEEecc
Confidence 346899999999999999999998765 99999874
No 323
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.24 E-value=0.008 Score=61.17 Aligned_cols=34 Identities=12% Similarity=0.185 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...|+|||+|..|+++|..++..|.. |.++.++.
T Consensus 27 ~yDVIVIGgG~AGl~AAlalAr~G~k---VlLIEk~~ 60 (637)
T 2zxi_A 27 EFDVVVIGGGHAGIEAALAAARMGAK---TAMFVLNA 60 (637)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCG
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCC---EEEEEecc
Confidence 35799999999999999999998765 99999874
No 324
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=96.23 E-value=0.0064 Score=59.34 Aligned_cols=35 Identities=17% Similarity=0.093 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...|+|||+|.+|+-+|..|++.|.. +|+++.+..
T Consensus 6 ~~dVvIIGgG~aGlsaA~~La~~G~~--~V~vlE~~~ 40 (438)
T 3dje_A 6 SSSLLIVGAGTWGTSTALHLARRGYT--NVTVLDPYP 40 (438)
T ss_dssp TSCEEEECCSHHHHHHHHHHHHTTCC--CEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHHcCCC--cEEEEeCCC
Confidence 35799999999999999999998861 399999875
No 325
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=96.21 E-value=0.0057 Score=50.41 Aligned_cols=35 Identities=14% Similarity=0.169 Sum_probs=33.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~ 35 (418)
|.+.+|+|+|+|..|..++..|.+.|.+++++|++
T Consensus 1 ~~~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~ 35 (153)
T 1id1_A 1 HRKDHFIVCGHSILAINTILQLNQRGQNVTVISNL 35 (153)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 78889999999999999999999999999999996
No 326
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=96.17 E-value=0.0074 Score=57.92 Aligned_cols=34 Identities=21% Similarity=0.164 Sum_probs=30.1
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.+|+|||+|.+|+-+|..|...|.. |+++.+.+.
T Consensus 3 ~dV~IvGaG~aGl~~A~~L~~~G~~---v~v~E~~~~ 36 (394)
T 1k0i_A 3 TQVAIIGAGPSGLLLGQLLHKAGID---NVILERQTP 36 (394)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHTCC---EEEECSSCH
T ss_pred ccEEEECCCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 4699999999999999999998865 999998763
No 327
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=96.16 E-value=0.0098 Score=55.93 Aligned_cols=33 Identities=15% Similarity=0.019 Sum_probs=28.4
Q ss_pred CEEEEEcCCCCHHHHHHHHhh---hcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTT---ANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~---~~~~~~~V~~~~r~~ 239 (418)
++|+|||+|.+|+-+|..|.+ .|. +|+++.+++
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~---~V~v~Ek~~ 37 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL---YLAVWDKAD 37 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE---EEEEECSSS
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc---eEEEEECCC
Confidence 379999999999999999988 654 499998864
No 328
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=96.12 E-value=0.0035 Score=63.31 Aligned_cols=36 Identities=22% Similarity=0.241 Sum_probs=32.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC-CCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~-~~~v~iie~~~~~ 38 (418)
.+|++|||+|.+|+.+|.+|++. +.+|+++|+....
T Consensus 13 ~~d~~ivG~G~~G~~~a~~l~~~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 13 EFDYIVVGGGSAGAAVAARLSEDPAVSVALVEAGPDD 49 (546)
T ss_dssp EEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCCCCEEEEecCCcC
Confidence 48999999999999999999997 8999999998644
No 329
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=96.10 E-value=0.015 Score=55.72 Aligned_cols=33 Identities=15% Similarity=0.101 Sum_probs=29.8
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 205 ~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
+|+|||+|.+|.-+|..|...|.. |+++.|++.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~---v~v~Er~~~ 35 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIK---VTIYERNSA 35 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCE---EEEECSSCS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCC---EEEEecCCC
Confidence 799999999999999999998865 999998764
No 330
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=96.09 E-value=0.0051 Score=62.41 Aligned_cols=35 Identities=26% Similarity=0.109 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
...|+|||+|.+|+-+|..|+..|.. |+++.+.+.
T Consensus 49 ~~DVvIVGaG~aGL~~A~~La~~G~~---V~VlEr~~~ 83 (570)
T 3fmw_A 49 TTDVVVVGGGPVGLMLAGELRAGGVG---ALVLEKLVE 83 (570)
T ss_dssp --CEEEECCSHHHHHHHHHHHHTTCC---EEEEBSCSS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCC---EEEEcCCCC
Confidence 35799999999999999999998865 999998764
No 331
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=96.04 E-value=0.055 Score=54.74 Aligned_cols=35 Identities=14% Similarity=0.256 Sum_probs=30.5
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
...|+|||+|.+|+-+|..|++.|.. |+++.+.+.
T Consensus 121 ~~DVvVVG~G~aGl~aA~~la~~G~~---V~vlEk~~~ 155 (566)
T 1qo8_A 121 TTQVLVVGAGSAGFNASLAAKKAGAN---VILVDKAPF 155 (566)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHTCC---EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 34699999999999999999998865 999998763
No 332
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.03 E-value=0.025 Score=53.84 Aligned_cols=34 Identities=21% Similarity=0.179 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..+|+|||+|.+|+-+|..|+++|.. |+++.+..
T Consensus 5 ~~dVvIIGgGi~Gl~~A~~La~~G~~---V~lle~~~ 38 (382)
T 1y56_B 5 KSEIVVIGGGIVGVTIAHELAKRGEE---VTVIEKRF 38 (382)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 35799999999999999999998765 99999864
No 333
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=96.03 E-value=0.051 Score=51.09 Aligned_cols=33 Identities=21% Similarity=0.126 Sum_probs=29.9
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..|+|||+|.+|+-+|..|+++|.. |+++.+.+
T Consensus 5 ~dvvIIG~G~~Gl~~A~~La~~G~~---V~vlE~~~ 37 (369)
T 3dme_A 5 IDCIVIGAGVVGLAIARALAAGGHE---VLVAEAAE 37 (369)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCe---EEEEeCCC
Confidence 4799999999999999999998765 99999875
No 334
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=96.02 E-value=0.0074 Score=60.38 Aligned_cols=33 Identities=15% Similarity=0.063 Sum_probs=29.5
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
.+|+|||+|.+|+-+|..|+..|.. |+++.+..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~---V~liE~~~ 40 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHR---VLLLEREA 40 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCC---EEEEccCC
Confidence 5799999999999999999988765 99999875
No 335
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=95.94 E-value=0.067 Score=54.19 Aligned_cols=35 Identities=17% Similarity=0.224 Sum_probs=30.4
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..+|+|||+|..|+.+|..|...|.. |+++.+.+.
T Consensus 126 ~~~v~viG~G~aG~~aa~~~~~~g~~---v~~~e~~~~ 160 (572)
T 1d4d_A 126 TTDVVIIGSGGAGLAAAVSARDAGAK---VILLEKEPI 160 (572)
T ss_dssp ECSEEEECCSHHHHHHHHHHHSSSCC---EEEECSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCc---EEEEecCCC
Confidence 45799999999999999999988765 999998764
No 336
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.94 E-value=0.0083 Score=48.56 Aligned_cols=34 Identities=12% Similarity=0.260 Sum_probs=31.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|+|+|+|..|..+|..|.+.|++++++|++.
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999964
No 337
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=95.93 E-value=0.027 Score=54.02 Aligned_cols=34 Identities=18% Similarity=0.033 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHhh-hc-CCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTT-AN-GLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~-~~-~~~~~V~~~~r~~ 239 (418)
..+|+|||+|.+|+-+|..|++ .| .. |+++.+..
T Consensus 21 ~~dVvIIG~G~~Gl~~A~~La~~~G~~~---V~vlE~~~ 56 (405)
T 2gag_B 21 SYDAIIVGGGGHGLATAYFLAKNHGITN---VAVLEKGW 56 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCC---EEEECSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHhcCCCc---EEEEeCCC
Confidence 3579999999999999999999 87 55 99999875
No 338
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=95.85 E-value=0.04 Score=57.21 Aligned_cols=34 Identities=9% Similarity=0.103 Sum_probs=30.3
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...|+|||+|.+|+-+|..|+++|.. |+++.+..
T Consensus 264 ~~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 297 (689)
T 3pvc_A 264 CDDIAIIGGGIVSALTALALQRRGAV---VTLYCADA 297 (689)
T ss_dssp CSSEEEECCSHHHHHHHHHHHTTTCC---EEEEESSS
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCc---EEEEeCCC
Confidence 46899999999999999999998865 99999864
No 339
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=95.81 E-value=0.068 Score=53.27 Aligned_cols=34 Identities=26% Similarity=0.284 Sum_probs=29.9
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..|+|||+|..|+-+|..|++.|.. |.++.+.+.
T Consensus 42 ~DVvVVGaG~AGl~AA~~aa~~G~~---V~vlEk~~~ 75 (510)
T 4at0_A 42 ADVVVAGYGIAGVAASIEAARAGAD---VLVLERTSG 75 (510)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCc---EEEEeCCCC
Confidence 4699999999999999999998765 999998763
No 340
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=95.80 E-value=0.025 Score=56.32 Aligned_cols=36 Identities=25% Similarity=0.155 Sum_probs=31.5
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 202 ~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
....|+|||+|.+|+-+|..|...|.. |+++.+.+.
T Consensus 11 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~ 46 (499)
T 2qa2_A 11 SDASVIVVGAGPAGLMLAGELRLGGVD---VMVLEQLPQ 46 (499)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCC---EEEEESCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCC
Confidence 356899999999999999999998865 999998764
No 341
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.74 E-value=0.01 Score=47.68 Aligned_cols=34 Identities=26% Similarity=0.321 Sum_probs=30.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|||+|..|..++..|.+.|.+++++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999853
No 342
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=95.73 E-value=0.027 Score=58.29 Aligned_cols=34 Identities=9% Similarity=0.097 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...|+|||+|.+|+-+|..|+++|.. |+++.+..
T Consensus 272 ~~DVvIIGgGiaGlsaA~~La~~G~~---V~vlEk~~ 305 (676)
T 3ps9_A 272 KREAAIIGGGIASALLSLALLRRGWQ---VTLYCADE 305 (676)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCE---EEEEESSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCe---EEEEeCCC
Confidence 46899999999999999999998764 99999864
No 343
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=95.68 E-value=0.028 Score=55.99 Aligned_cols=36 Identities=28% Similarity=0.183 Sum_probs=31.4
Q ss_pred CCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 202 KGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 202 ~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
+...|+|||+|.+|+-+|..|+..|.. |+++.+.+.
T Consensus 10 ~~~dVlIVGaGpaGl~~A~~La~~G~~---v~vlE~~~~ 45 (500)
T 2qa1_A 10 SDAAVIVVGAGPAGMMLAGELRLAGVE---VVVLERLVE 45 (500)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCC---EEEEESCCC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 456799999999999999999998865 999998764
No 344
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=95.66 E-value=0.017 Score=55.02 Aligned_cols=34 Identities=15% Similarity=0.013 Sum_probs=30.0
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
...|+|||+|.+|+-+|..|++.|.. |+++.+..
T Consensus 17 ~~dvvIIGgG~~Gl~~A~~La~~G~~---V~llE~~~ 50 (382)
T 1ryi_A 17 HYEAVVIGGGIIGSAIAYYLAKENKN---TALFESGT 50 (382)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCCc---EEEEeCCC
Confidence 35799999999999999999998765 99999864
No 345
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=95.63 E-value=0.0043 Score=59.44 Aligned_cols=34 Identities=15% Similarity=-0.014 Sum_probs=30.3
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..|+|||+|.+|.-+|..|+..|.. |+++.+...
T Consensus 5 ~dVvIvG~G~aGl~~A~~La~~G~~---V~l~E~~~~ 38 (397)
T 3cgv_A 5 YDVLVVGGGPGGSTAARYAAKYGLK---TLMIEKRPE 38 (397)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 4799999999999999999998765 999999763
No 346
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.61 E-value=0.013 Score=48.44 Aligned_cols=34 Identities=26% Similarity=0.364 Sum_probs=31.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|..|..++..|.+.|.+|+++|++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 347
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.57 E-value=0.031 Score=56.21 Aligned_cols=34 Identities=21% Similarity=0.065 Sum_probs=29.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..+|+|||+|.+|+-+|..|.+.|.. |+++.+++
T Consensus 16 ~~dVvIIGaG~aGl~aA~~L~~~G~~---v~iiE~~~ 49 (542)
T 1w4x_A 16 EVDVLVVGAGFSGLYALYRLRELGRS---VHVIETAG 49 (542)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCC---EEEECSSS
T ss_pred CCCEEEECccHHHHHHHHHHHhCCCC---EEEEeCCC
Confidence 35799999999999999999998765 99999865
No 348
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=95.49 E-value=0.018 Score=56.50 Aligned_cols=34 Identities=9% Similarity=-0.027 Sum_probs=30.1
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.+|+|||+|.+|.-+|..|+..|.. |+++.+.+.
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~---V~vlE~~~~ 40 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLK---ILLVDSKPW 40 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCC---EEEECSSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCC
Confidence 4799999999999999999988765 999998764
No 349
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.47 E-value=0.016 Score=46.87 Aligned_cols=34 Identities=26% Similarity=0.312 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+.+|+|||+|..|..+|..|.+.|++++++|++.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 3579999999999999999999999999999964
No 350
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=95.41 E-value=0.016 Score=46.61 Aligned_cols=34 Identities=26% Similarity=0.318 Sum_probs=31.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|+|+|+|..|..++..|.+.|.+++++|++.
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4579999999999999999999999999999853
No 351
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=95.33 E-value=0.046 Score=54.82 Aligned_cols=35 Identities=26% Similarity=0.130 Sum_probs=30.8
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
...|+|||+|.+|+-+|..|...|.. |+++.|.+.
T Consensus 5 ~~dVlIVGaG~aGl~~A~~La~~G~~---v~viEr~~~ 39 (535)
T 3ihg_A 5 EVDVLVVGAGLGGLSTAMFLARQGVR---VLVVERRPG 39 (535)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTCC---EEEECSSSS
T ss_pred cCcEEEECcCHHHHHHHHHHHHCCCC---EEEEeCCCC
Confidence 35899999999999999999998765 999998764
No 352
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=95.28 E-value=0.024 Score=49.84 Aligned_cols=35 Identities=29% Similarity=0.207 Sum_probs=31.2
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 201 ~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
.++++|+|||+|.+|...+..|...|.. |+++.+.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~---VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAA---ITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCC---EEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCE---EEEECCC
Confidence 5689999999999999999999999876 9998863
No 353
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.25 E-value=0.017 Score=44.67 Aligned_cols=34 Identities=24% Similarity=0.338 Sum_probs=30.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~ 36 (418)
+++|+|+|+|..|..++..|.+.| .++++++++.
T Consensus 5 ~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 5 RWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred cCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 468999999999999999999999 8999999863
No 354
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=95.24 E-value=0.016 Score=58.24 Aligned_cols=49 Identities=16% Similarity=0.153 Sum_probs=36.3
Q ss_pred cchhhhhccCcEEEeccCceeEec--C----cEEEcCCceeeeccEEEEccCCCCC
Q 014821 328 EKFYDKVEEGSIILKKSQDFSFCE--D----GIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 328 ~~~~~~~~~~~v~~~~~~v~~~~~--~----~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
..+.+.+++.+++++.+.+..+.. + +|.+++|++ +.+|.||.|+|....
T Consensus 169 ~~L~~~a~~~gv~~~~~~v~~i~~~~~g~~~~v~~~~g~~-i~ad~vV~A~G~~s~ 223 (538)
T 2aqj_A 169 DFLKRWAVERGVNRVVDEVVDVRLNNRGYISNLLTKEGRT-LEADLFIDCSGMRGL 223 (538)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEETTSCE-ECCSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEEeeEeEEEEcCCCcEEEEEECCCcE-EEeCEEEECCCCchh
Confidence 344556666678888887766642 2 366778887 999999999998765
No 355
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.13 E-value=0.02 Score=52.52 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=33.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|+.++|+|||+|.-|..+|..|++.|++|+++|++.
T Consensus 2 m~~~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 2 TGITNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 456899999999999999999999999999999864
No 356
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=94.94 E-value=0.025 Score=56.63 Aligned_cols=48 Identities=10% Similarity=0.106 Sum_probs=35.2
Q ss_pred chhhhhcc-CcEEEeccCceeEec--C----cEEEcCCceeeeccEEEEccCCCCC
Q 014821 329 KFYDKVEE-GSIILKKSQDFSFCE--D----GIVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 329 ~~~~~~~~-~~v~~~~~~v~~~~~--~----~v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
.+.+.+++ .+++++.+.+..+.. + +|.+++|.+ +.+|.||.|+|....
T Consensus 180 ~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~~~v~~~~g~~-i~ad~vV~AdG~~S~ 234 (526)
T 2pyx_A 180 LLTEHCTQKLGVTHIRDHVSQIINNQHGDIEKLITKQNGE-ISGQLFIDCTGAKSL 234 (526)
T ss_dssp HHHHHHHHTSCCEEEECCEEEEEECTTSCEEEEEESSSCE-EECSEEEECSGGGCC
T ss_pred HHHHHHHhcCCCEEEEeEEEEEEecCCCcEEEEEECCCCE-EEcCEEEECCCcchH
Confidence 34455565 678888887776642 2 356678888 999999999999755
No 357
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.84 E-value=0.025 Score=53.15 Aligned_cols=35 Identities=34% Similarity=0.326 Sum_probs=32.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~ 35 (418)
|..++|+|||+|.-|.+.|..|++.|.+|+++++.
T Consensus 1 M~~mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 1 MSLTRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp -CCCCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 77789999999999999999999999999999984
No 358
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.83 E-value=0.028 Score=47.66 Aligned_cols=34 Identities=29% Similarity=0.324 Sum_probs=31.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC-CCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK-GFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~-~~~v~iie~~~ 36 (418)
..+|+|||+|..|..+|..|.+. |++|+++|++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 35799999999999999999999 99999999964
No 359
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=94.76 E-value=0.032 Score=53.81 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCC-eEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENP-CTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~-V~~~~r~~~ 240 (418)
..+|+|||+|.+|+-+|..|...| .+ |+++.+.+.
T Consensus 4 ~~dVvIVGaG~aGl~~A~~L~~~G---~~~v~v~E~~~~ 39 (410)
T 3c96_A 4 PIDILIAGAGIGGLSCALALHQAG---IGKVTLLESSSE 39 (410)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTT---CSEEEEEESSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCC---CCeEEEEECCCC
Confidence 358999999999999999998876 37 999998764
No 360
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=94.69 E-value=0.044 Score=54.57 Aligned_cols=49 Identities=14% Similarity=0.173 Sum_probs=36.0
Q ss_pred cchhhhhccCcEEEeccCceeEec--Cc----EEEcCCceeeeccEEEEccCCCCC
Q 014821 328 EKFYDKVEEGSIILKKSQDFSFCE--DG----IVVDGQTTPLKTDLVILATGFKGD 377 (418)
Q Consensus 328 ~~~~~~~~~~~v~~~~~~v~~~~~--~~----v~~~~g~~~~~~D~Vi~atG~~~~ 377 (418)
..+.+.+++.+++++.+.+..+.. ++ |.+++|++ +.+|.||.|+|....
T Consensus 177 ~~L~~~a~~~gv~~~~~~v~~i~~~~~~~~~~v~~~~g~~-~~ad~vV~A~G~~S~ 231 (511)
T 2weu_A 177 RYLSEYAIARGVRHVVDDVQHVGQDERGWISGVHTKQHGE-ISGDLFVDCTGFRGL 231 (511)
T ss_dssp HHHHHHHHHTTCEEEECCEEEEEECTTSCEEEEEESSSCE-EECSEEEECCGGGCC
T ss_pred HHHHHHHHHCCCEEEECeEeEEEEcCCCCEEEEEECCCCE-EEcCEEEECCCcchH
Confidence 344555666678888887666653 23 66778887 999999999999755
No 361
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.60 E-value=0.03 Score=52.26 Aligned_cols=36 Identities=19% Similarity=0.341 Sum_probs=31.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|+.++|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 4 ~~~~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~ 39 (319)
T 2dpo_A 4 PAAGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 456789999999999999999999999999999964
No 362
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=94.51 E-value=0.39 Score=48.66 Aligned_cols=34 Identities=15% Similarity=0.294 Sum_probs=29.8
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..|+|||+|.+|+-+|..|++.|.. |.++.+...
T Consensus 8 ~DVvVVGaG~AGl~AA~~la~~G~~---V~vlEK~~~ 41 (588)
T 2wdq_A 8 FDAVVIGAGGAGMRAALQISQSGQT---CALLSKVFP 41 (588)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSCG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCc---EEEEecCCC
Confidence 4799999999999999999988765 999998753
No 363
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=94.33 E-value=0.078 Score=56.27 Aligned_cols=35 Identities=26% Similarity=0.253 Sum_probs=30.2
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 203 GKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..+|+|||+|.+|+-+|..|+++|. .+|+++.+..
T Consensus 4 ~~dVvIIGgGi~Gls~A~~La~~G~--~~V~vlE~~~ 38 (830)
T 1pj5_A 4 TPRIVIIGAGIVGTNLADELVTRGW--NNITVLDQGP 38 (830)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC--CCEEEECSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHhCCC--CcEEEEeCCC
Confidence 3579999999999999999999886 1399999875
No 364
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=94.32 E-value=0.035 Score=52.43 Aligned_cols=36 Identities=31% Similarity=0.524 Sum_probs=31.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|++++|+|||+|..|...|..|++.|.+|++++++.
T Consensus 2 m~~mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 2 IESKTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCcCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 556799999999999999999999999999999853
No 365
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=94.28 E-value=0.036 Score=51.24 Aligned_cols=36 Identities=25% Similarity=0.241 Sum_probs=30.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|.+++|+|||+|..|...|..|++.|.+|++++++.
T Consensus 1 ~~~m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 1 SNAMKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp ---CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCCCeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 445789999999999999999999999999999853
No 366
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=94.21 E-value=0.048 Score=47.93 Aligned_cols=34 Identities=21% Similarity=0.269 Sum_probs=31.7
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~ 35 (418)
+.+.|+|||||..|...+..|.+.|.+|+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 4578999999999999999999999999999985
No 367
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.14 E-value=0.046 Score=50.48 Aligned_cols=34 Identities=15% Similarity=0.356 Sum_probs=31.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||+|.-|..+|..|++.|++|+++|++.
T Consensus 15 ~~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 15 VKHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4679999999999999999999999999999964
No 368
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=94.11 E-value=0.053 Score=49.30 Aligned_cols=36 Identities=25% Similarity=0.321 Sum_probs=33.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|++++|+|.|+|..|..++..|.+.|.+|+++.++.
T Consensus 1 M~~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 36 (286)
T 3gpi_A 1 MSLSKILIAGCGDLGLELARRLTAQGHEVTGLRRSA 36 (286)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEEECTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCc
Confidence 778899999999999999999999999999999864
No 369
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=94.11 E-value=0.023 Score=49.91 Aligned_cols=36 Identities=19% Similarity=0.223 Sum_probs=32.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEE-EeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIV-FEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~i-ie~~~ 36 (418)
|++++|.|||+|.-|.++|..|.+.|+++++ ++++.
T Consensus 21 m~mmkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 21 QSMTTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp GGSCCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred hcCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5567999999999999999999999999998 77753
No 370
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=94.03 E-value=0.16 Score=50.91 Aligned_cols=33 Identities=18% Similarity=0.240 Sum_probs=28.6
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
..|+|||+|.+|+-+|..|++ |.. |.++.+...
T Consensus 9 ~DVvVVG~G~AGl~aAl~la~-G~~---V~vlEk~~~ 41 (540)
T 1chu_A 9 CDVLIIGSGAAGLSLALRLAD-QHQ---VIVLSKGPV 41 (540)
T ss_dssp CSEEEECCSHHHHHHHHHHTT-TSC---EEEECSSCT
T ss_pred CCEEEECccHHHHHHHHHHhc-CCc---EEEEECCCC
Confidence 469999999999999999988 654 999998763
No 371
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.91 E-value=0.046 Score=47.79 Aligned_cols=32 Identities=9% Similarity=0.363 Sum_probs=30.3
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|+|||+|..|..+|..|.+.|++++++|++.
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 69999999999999999999999999999964
No 372
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.85 E-value=0.056 Score=50.45 Aligned_cols=36 Identities=25% Similarity=0.476 Sum_probs=32.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
|++++|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CcCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 777899999999999999999999988 999999864
No 373
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=93.78 E-value=0.05 Score=53.29 Aligned_cols=35 Identities=26% Similarity=0.393 Sum_probs=31.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|. ++|+|||+|..|+.+|..|++.|++|+++|++.
T Consensus 1 M~-mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 1 MS-LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp -C-CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CC-CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 54 589999999999999999999999999999875
No 374
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=93.76 E-value=0.053 Score=53.40 Aligned_cols=36 Identities=25% Similarity=0.381 Sum_probs=33.2
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhC-CC-ceEEEeeCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLK-GF-HPIVFEARSD 37 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~-~~-~v~iie~~~~ 37 (418)
..++|+|||+|.-|+.+|..|++. |+ +|+++|++..
T Consensus 17 ~~mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 17 PIKKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp SCCEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CCCEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 457899999999999999999999 99 9999999764
No 375
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.68 E-value=0.054 Score=49.16 Aligned_cols=35 Identities=23% Similarity=0.354 Sum_probs=32.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+.+.|+|||||-.|...+..|.+.|.+|+|+++..
T Consensus 12 ~~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 12 KDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 35789999999999999999999999999999853
No 376
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.62 E-value=0.051 Score=53.11 Aligned_cols=37 Identities=30% Similarity=0.656 Sum_probs=33.1
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
+.++|+|||.|.+|+++|..|.++|++|+++|.+...
T Consensus 4 ~~~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~ 40 (439)
T 2x5o_A 4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTP 40 (439)
T ss_dssp TTCCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSC
T ss_pred CCCEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCc
Confidence 4578999999999999999999999999999987643
No 377
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.54 E-value=0.072 Score=49.66 Aligned_cols=36 Identities=31% Similarity=0.526 Sum_probs=32.8
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
|++++|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 3 m~~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 3 MARKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 777899999999999999999999888 999999864
No 378
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.54 E-value=0.059 Score=52.83 Aligned_cols=34 Identities=24% Similarity=0.310 Sum_probs=31.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||.|.+|+++|..|.++|++|++.|.+.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4789999999999999999999999999999864
No 379
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=93.52 E-value=0.069 Score=50.60 Aligned_cols=34 Identities=35% Similarity=0.369 Sum_probs=31.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|+|||+|.-|.++|..|++.|.+|+++++++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5689999999999999999999999999999964
No 380
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=93.50 E-value=0.95 Score=45.96 Aligned_cols=35 Identities=17% Similarity=0.239 Sum_probs=29.2
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..|+|||+|.+|+-+|..|++.|.. .+|.++.+..
T Consensus 6 ~DVvIVG~G~AGl~aAl~la~~G~~-~~V~vlEk~~ 40 (602)
T 1kf6_A 6 ADLAIVGAGGAGLRAAIAAAQANPN-AKIALISKVY 40 (602)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTT-CCEEEEESSC
T ss_pred CCEEEECCCHHHHHHHHHHHhcCCC-CcEEEEeCCC
Confidence 3699999999999999999998721 2499999875
No 381
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=93.45 E-value=0.13 Score=48.36 Aligned_cols=35 Identities=17% Similarity=0.146 Sum_probs=29.9
Q ss_pred CCEEEEEcCCCCHHHHHHHHhhh--cCCCCCeEEEEecCc
Q 014821 203 GKRVTVVGLQKSALDIAMECTTA--NGLENPCTVLYRTEH 240 (418)
Q Consensus 203 ~~~v~VvG~G~sa~e~a~~l~~~--~~~~~~V~~~~r~~~ 240 (418)
...|+|||+|.+|+-+|..|+.. +. +|.++.+...
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~---~V~LiEk~~~ 115 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDL---RITIVEAGVA 115 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTS---CEEEEESSSS
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCC---EEEEEeCCCc
Confidence 45799999999999999999987 54 4999998753
No 382
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=93.42 E-value=0.07 Score=47.95 Aligned_cols=36 Identities=14% Similarity=0.190 Sum_probs=32.8
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCC----CceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKG----FHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~----~~v~iie~~~ 36 (418)
|++++|.|||+|.-|.+.|..|++.| .+|++++++.
T Consensus 2 m~~m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~ 41 (262)
T 2rcy_A 2 MENIKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSK 41 (262)
T ss_dssp CSSSCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSC
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCc
Confidence 77789999999999999999999988 6899999875
No 383
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=93.35 E-value=0.075 Score=53.94 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=29.5
Q ss_pred CEEEEEcCCCCHHHHHHHHhhh------cCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTTA------NGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~------~~~~~~V~~~~r~~~ 240 (418)
..|+|||+|.+|+-+|..|... +.. |.++.+.+.
T Consensus 36 ~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~---V~vlEk~~~ 75 (584)
T 2gmh_A 36 ADVVIVGAGPAGLSAATRLKQLAAQHEKDLR---VCLVEKAAH 75 (584)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHHHHTTCCCC---EEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHHhcccccCCCCc---EEEEeCCCC
Confidence 5799999999999999999987 654 999998753
No 384
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=93.33 E-value=0.083 Score=48.20 Aligned_cols=36 Identities=19% Similarity=0.260 Sum_probs=32.6
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCC---ceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGF---HPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~---~v~iie~~~ 36 (418)
|++++|.|||+|.-|.+.+..|.+.|+ +|+++|++.
T Consensus 1 M~~~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 1 MNTSNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp -CCSCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CCCCEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 777899999999999999999999998 899999864
No 385
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.31 E-value=0.078 Score=49.28 Aligned_cols=35 Identities=20% Similarity=0.485 Sum_probs=31.8
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
|+.++|+|||+|..|.++|..|+..++ +++++|.+
T Consensus 6 ~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~ 41 (315)
T 3tl2_A 6 IKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIP 41 (315)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCG
T ss_pred cCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEecc
Confidence 345789999999999999999999999 99999996
No 386
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.27 E-value=0.074 Score=49.51 Aligned_cols=32 Identities=22% Similarity=0.282 Sum_probs=30.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~ 35 (418)
++|+|||+|.-|.+.|..|++.|.+|++++++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 67999999999999999999999999999995
No 387
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=93.26 E-value=0.072 Score=50.47 Aligned_cols=36 Identities=22% Similarity=0.370 Sum_probs=32.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|+.++|.|||.|.-|..+|..|++.|++|+++|++.
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred hcCCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 456799999999999999999999999999999864
No 388
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=93.09 E-value=0.077 Score=52.44 Aligned_cols=36 Identities=28% Similarity=0.435 Sum_probs=32.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|.+++|.|||+|.-|..+|..|++.|++|++++++.
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 678999999999999999999999999999999864
No 389
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=93.02 E-value=0.088 Score=48.79 Aligned_cols=34 Identities=24% Similarity=0.417 Sum_probs=31.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||.|.-|..+|..|++.|++|+++|++.
T Consensus 21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 54 (310)
T 3doj_A 21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTL 54 (310)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 5789999999999999999999999999999965
No 390
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=92.98 E-value=0.096 Score=46.69 Aligned_cols=35 Identities=20% Similarity=0.220 Sum_probs=31.8
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..++|.|||+|.-|.++|..|++.|++|++++++.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~ 52 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDP 52 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 35789999999999999999999999999999864
No 391
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=92.96 E-value=1.5 Score=44.72 Aligned_cols=33 Identities=18% Similarity=0.066 Sum_probs=29.4
Q ss_pred CEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecC
Q 014821 204 KRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTE 239 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~ 239 (418)
..|+|||+|.+|+-+|..|++.|.. |.++.+..
T Consensus 19 ~DVvVVG~G~AGl~AAl~aa~~G~~---V~vlEK~~ 51 (621)
T 2h88_A 19 FDAVVVGAGGAGLRAAFGLSEAGFN---TACVTKLF 51 (621)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCC---EEEEESSC
T ss_pred CCEEEECccHHHHHHHHHHHHCCCc---EEEEeccC
Confidence 4799999999999999999988765 99999865
No 392
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.93 E-value=0.091 Score=51.91 Aligned_cols=36 Identities=14% Similarity=0.403 Sum_probs=32.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|+.++|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 3 m~~~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 38 (483)
T 3mog_A 3 LNVQTVAVIGSGTMGAGIAEVAASHGHQVLLYDISA 38 (483)
T ss_dssp -CCCCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCCCEEEEECcCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 346789999999999999999999999999999864
No 393
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.93 E-value=0.1 Score=45.36 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=31.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||+|..|.++|..|++.|.+|++++++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~ 52 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKD 52 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4689999999999999999999999999999865
No 394
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=92.89 E-value=0.088 Score=48.96 Aligned_cols=36 Identities=19% Similarity=0.357 Sum_probs=32.0
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
|. +++|+|||+|..|.++|..|+..|+ +++++|++.
T Consensus 1 M~~~~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 1 MIERRKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 55 3689999999999999999999998 999999864
No 395
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.83 E-value=0.08 Score=49.11 Aligned_cols=33 Identities=36% Similarity=0.366 Sum_probs=30.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|+|||+|.-|.+.|..|++.|.+|++++++.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRRD 35 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcCc
Confidence 579999999999999999999999999999953
No 396
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=92.79 E-value=0.099 Score=48.57 Aligned_cols=34 Identities=21% Similarity=0.385 Sum_probs=31.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|.-|...|..++..|++|+++|.++
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHhCCCeEEEEECCH
Confidence 3579999999999999999999999999999864
No 397
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=92.78 E-value=0.11 Score=49.30 Aligned_cols=34 Identities=21% Similarity=0.348 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|+|||||..|..++..+.+.|++++++|.++
T Consensus 1 MK~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~ 34 (363)
T 4ffl_A 1 MKTICLVGGKLQGFEAAYLSKKAGMKVVLVDKNP 34 (363)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCC
Confidence 3789999999999999999999999999999865
No 398
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=92.76 E-value=0.093 Score=51.59 Aligned_cols=35 Identities=14% Similarity=0.226 Sum_probs=31.9
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..++|.|||+|.-|..+|..|++.|++|+++|++.
T Consensus 36 ~~~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 36 PVSSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 35689999999999999999999999999999864
No 399
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.73 E-value=0.1 Score=51.03 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=32.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..++|.|||+|.-|...|..|++.|++|+++|++.
T Consensus 53 ~i~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~ 87 (460)
T 3k6j_A 53 DVNSVAIIGGGTMGKAMAICFGLAGIETFLVVRNE 87 (460)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCeEEEEECcH
Confidence 35789999999999999999999999999999964
No 400
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=92.73 E-value=0.082 Score=48.61 Aligned_cols=35 Identities=14% Similarity=0.162 Sum_probs=32.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
+++|.|||.|.-|...|..|++.|++|+++|++..
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 46899999999999999999999999999999764
No 401
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=92.68 E-value=0.21 Score=49.53 Aligned_cols=46 Identities=17% Similarity=0.095 Sum_probs=33.4
Q ss_pred HHhcCcccceEeeeEEEEEEEcCCCCcccccccccCCCCCCCCCCCceEEEEecCCCCceeEEEeCEEEEeeccC
Q 014821 87 ASHFDLRKHIKFNRKVVGIEFEGLSGEDEKSWSFWNGNGQPFGSRGKWTVAVEDAKNHSTEVHQVDFVILCVGRF 161 (418)
Q Consensus 87 ~~~~~~~~~v~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~i~~d~vIlAtG~~ 161 (418)
+++.|+ .+++++.|.++.... ....+...++ .++.+|.||+|+|..
T Consensus 267 l~~~GV--~v~~~~~v~~i~~~~----------------------~v~~v~~~~g-----~~i~aD~Vv~a~G~~ 312 (493)
T 1y56_A 267 LERWGI--DYVHIPNVKRVEGNE----------------------KVERVIDMNN-----HEYKVDALIFADGRR 312 (493)
T ss_dssp HHHHTC--EEEECSSEEEEECSS----------------------SCCEEEETTC-----CEEECSEEEECCCEE
T ss_pred HHhCCc--EEEeCCeeEEEecCC----------------------ceEEEEeCCC-----eEEEeCEEEECCCcC
Confidence 345688 788999999987543 2334554444 589999999999965
No 402
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=92.64 E-value=0.057 Score=51.30 Aligned_cols=33 Identities=18% Similarity=0.202 Sum_probs=30.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.|||+|.-|.+.|..|++.|++|++++++.
T Consensus 16 ~kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 16 NKAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 389999999999999999999999999999864
No 403
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=92.64 E-value=0.099 Score=49.67 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
+..+|||+|||.+|+.+|..|...|. +++++|++
T Consensus 187 ~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 187 DEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 35689999999999999999999998 89999996
No 404
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=92.62 E-value=0.066 Score=47.31 Aligned_cols=33 Identities=15% Similarity=0.236 Sum_probs=29.7
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 205 ~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
.|+|||+|.+|+-+|..|+..|.. |+++.+++.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~---V~v~Ek~~~ 36 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQ---VHLFDKSRG 36 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCC---EEEEECCCC
Confidence 599999999999999999999876 999998753
No 405
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=92.62 E-value=1.4 Score=43.19 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=27.6
Q ss_pred EEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 205 RVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 205 ~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
.|+|||+|..|+-+|..|.+.|.. |.++.+.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~~---V~viek~ 31 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGKK---VTLISKR 31 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCC---EEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCCC---EEEEeCC
Confidence 389999999999999999987754 9999986
No 406
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=92.61 E-value=0.13 Score=43.79 Aligned_cols=36 Identities=36% Similarity=0.490 Sum_probs=32.8
Q ss_pred CCCccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|..+.|+|+|| |..|..++..|.+.|.+|++++++.
T Consensus 1 M~~~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~ 37 (206)
T 1hdo_A 1 MAVKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDS 37 (206)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeCh
Confidence 66678999998 9999999999999999999999864
No 407
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=92.59 E-value=0.12 Score=48.20 Aligned_cols=34 Identities=24% Similarity=0.508 Sum_probs=30.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
+++|+|||+|..|..+|..|+..++ +++++|.+.
T Consensus 4 ~~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 4 KAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 5689999999999999999999988 999999853
No 408
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=92.59 E-value=0.095 Score=50.85 Aligned_cols=33 Identities=18% Similarity=0.252 Sum_probs=30.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|||+|.-|+.+|..|++ |++|+++|++.
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 4689999999999999999998 99999999865
No 409
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.59 E-value=0.11 Score=47.16 Aligned_cols=33 Identities=21% Similarity=0.262 Sum_probs=30.7
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
+|.|||+|..|...|..|++.|.+|++++++..
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 699999999999999999999999999998753
No 410
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=92.58 E-value=0.1 Score=48.61 Aligned_cols=36 Identities=14% Similarity=0.223 Sum_probs=31.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCC----CceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKG----FHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~----~~v~iie~~~ 36 (418)
|++++|.|||+|.-|.+.|..|.+.| .+|++++++.
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 45678999999999999999999998 7899999864
No 411
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=92.57 E-value=0.062 Score=50.70 Aligned_cols=36 Identities=22% Similarity=0.230 Sum_probs=32.0
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCC-------CceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKG-------FHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~-------~~v~iie~~~ 36 (418)
|.+++|+|||+|.-|.+.|..|++.| .+|++++++.
T Consensus 6 m~~mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~ 48 (354)
T 1x0v_A 6 MASKKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEE 48 (354)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCC
T ss_pred cCCCeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcCh
Confidence 55678999999999999999999988 8999999865
No 412
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.54 E-value=0.12 Score=48.28 Aligned_cols=33 Identities=30% Similarity=0.400 Sum_probs=30.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
++|+|||+|..|..+|..|+..|+ +++++|.+.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 589999999999999999999998 999999964
No 413
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.52 E-value=0.1 Score=51.56 Aligned_cols=34 Identities=21% Similarity=0.391 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|||+|+-|+.+|..|++.|++|+++|++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999864
No 414
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=92.52 E-value=0.1 Score=49.44 Aligned_cols=34 Identities=24% Similarity=0.486 Sum_probs=31.3
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
+..+|||+|||.+|..+|..|...|. +++++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 45789999999999999999999998 79999996
No 415
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.44 E-value=0.11 Score=48.15 Aligned_cols=32 Identities=19% Similarity=0.325 Sum_probs=30.1
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~ 35 (418)
++|+|||+|..|..+|..|+..|. +|+++|++
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~ 41 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIA 41 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 589999999999999999999998 99999985
No 416
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=92.41 E-value=0.14 Score=44.68 Aligned_cols=34 Identities=21% Similarity=0.274 Sum_probs=30.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||+|..|...+..|.+.|.++++++++.
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3679999999999999999999999999999863
No 417
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=92.33 E-value=0.14 Score=48.20 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=31.4
Q ss_pred CCCccEEEEcC-CHHHHHHHHHHHhCCC--ceEEEeeC
Q 014821 1 MEKKQIAIVGA-GVSGLLACKYLLLKGF--HPIVFEAR 35 (418)
Q Consensus 1 m~~~~vvIIG~-G~aGl~~a~~L~~~~~--~v~iie~~ 35 (418)
|..++|+|||+ |..|.++|..++..|. +++++|.+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~ 43 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPF 43 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 56789999997 9999999999999885 89999985
No 418
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=92.29 E-value=0.12 Score=47.62 Aligned_cols=34 Identities=24% Similarity=0.304 Sum_probs=31.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||.|.-|...|..|++.|++|+++|++.
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 4689999999999999999999999999999864
No 419
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=92.27 E-value=0.13 Score=50.64 Aligned_cols=36 Identities=22% Similarity=0.256 Sum_probs=33.1
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|.+++|.|||.|.-|..+|..|+++|++|++++++.
T Consensus 2 ~~~~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~ 37 (484)
T 4gwg_A 2 NAQADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 37 (484)
T ss_dssp -CCBSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CCCCEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 567899999999999999999999999999999975
No 420
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.23 E-value=0.13 Score=47.92 Aligned_cols=34 Identities=24% Similarity=0.407 Sum_probs=30.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
+++|+|||+|..|..+|..|+..+. +++++|.+.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 4689999999999999999999887 899999853
No 421
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.19 E-value=0.14 Score=49.16 Aligned_cols=34 Identities=29% Similarity=0.315 Sum_probs=31.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|.+|+.++..|...|.+|+++|++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3589999999999999999999999999999974
No 422
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=92.18 E-value=0.091 Score=51.93 Aligned_cols=34 Identities=24% Similarity=0.368 Sum_probs=30.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~ 36 (418)
+++|+|||+|..|+..|..|++. |++|+++|++.
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 46899999999999999999998 78999999864
No 423
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.18 E-value=0.12 Score=50.36 Aligned_cols=34 Identities=15% Similarity=0.371 Sum_probs=31.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+.+|+|||.|+.||.+|..|++.|++|+.+|.+.
T Consensus 21 m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 21 MASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 4689999999999999999999999999999865
No 424
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=92.16 E-value=0.14 Score=52.60 Aligned_cols=34 Identities=18% Similarity=0.221 Sum_probs=30.0
Q ss_pred CEEEEEcCCCCHHHHHHHHhh-hcCCCCCeEEEEecCc
Q 014821 204 KRVTVVGLQKSALDIAMECTT-ANGLENPCTVLYRTEH 240 (418)
Q Consensus 204 ~~v~VvG~G~sa~e~a~~l~~-~~~~~~~V~~~~r~~~ 240 (418)
..|+|||+|.+|+-+|..|+. .|.. |+++.+.+.
T Consensus 33 ~dVlIVGaGpaGL~~A~~La~~~G~~---V~viEr~~~ 67 (639)
T 2dkh_A 33 VDVLIVGCGPAGLTLAAQLAAFPDIR---TCIVEQKEG 67 (639)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCTTSC---EEEECSSSS
T ss_pred CcEEEECcCHHHHHHHHHHHHhCCCC---EEEEeCCCC
Confidence 479999999999999999998 7765 999998763
No 425
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=92.09 E-value=0.15 Score=47.30 Aligned_cols=34 Identities=26% Similarity=0.387 Sum_probs=31.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||+|..|...|..|.+.|.+|++++++.
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4789999999999999999999999999999864
No 426
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=92.05 E-value=0.13 Score=47.95 Aligned_cols=35 Identities=11% Similarity=0.314 Sum_probs=30.4
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~ 35 (418)
|..++|+|||+|..|.++|..|+..+. +++++|.+
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 345689999999999999999998875 79999975
No 427
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.00 E-value=0.13 Score=48.22 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=30.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
++|+|||+|..|.++|..|+..|+ +++++|.+.
T Consensus 10 ~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 10 KKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 589999999999999999999988 999999864
No 428
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=91.95 E-value=0.15 Score=50.26 Aligned_cols=36 Identities=17% Similarity=0.353 Sum_probs=33.2
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|.+++|.|||+|.-|..+|..|++.|++|++++++.
T Consensus 3 m~~~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 3 MAQANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp CTTBSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCCCcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 666789999999999999999999999999999864
No 429
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=91.88 E-value=0.12 Score=47.95 Aligned_cols=33 Identities=15% Similarity=0.216 Sum_probs=30.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
+++|.|||.|.-|..+|..|++.|+ +|+++|++
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 4689999999999999999999999 99999995
No 430
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.86 E-value=0.13 Score=47.22 Aligned_cols=33 Identities=21% Similarity=0.239 Sum_probs=30.8
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|+|||+|.-|.+.|..|++.|.+|++++++.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 579999999999999999999999999999963
No 431
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.84 E-value=0.15 Score=49.77 Aligned_cols=36 Identities=19% Similarity=0.333 Sum_probs=32.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
..+|.|||.|+-|+.+|..|++.|++|+++|++...
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~k 43 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDARK 43 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTT
T ss_pred ceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHH
Confidence 368999999999999999999999999999998643
No 432
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=91.80 E-value=0.12 Score=47.08 Aligned_cols=36 Identities=22% Similarity=0.306 Sum_probs=31.7
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~ 36 (418)
|++++|.|||+|..|.+.|..|.+. +.+|+++|++.
T Consensus 4 M~~~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 4 MEEKTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSD 41 (290)
T ss_dssp GCCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSH
T ss_pred cccceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCH
Confidence 6678899999999999999999987 57899998864
No 433
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=91.74 E-value=0.14 Score=47.64 Aligned_cols=34 Identities=24% Similarity=0.443 Sum_probs=31.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||.|..|..+|..|++.|++|+++|++.
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3589999999999999999999999999999864
No 434
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.72 E-value=0.075 Score=42.99 Aligned_cols=33 Identities=18% Similarity=0.264 Sum_probs=30.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|+|||+|..|..++..|...|.++++++++.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 689999999999999999999999999999853
No 435
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=91.65 E-value=0.11 Score=51.03 Aligned_cols=36 Identities=25% Similarity=0.349 Sum_probs=32.2
Q ss_pred CC-CccEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCC
Q 014821 1 ME-KKQIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (418)
Q Consensus 1 m~-~~~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~ 36 (418)
|+ +++|+|||+|..|+..|..|++. |++|+++|++.
T Consensus 2 M~~~mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 2 MFEIKKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CCCCCEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CCCccEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 55 46899999999999999999998 78999999864
No 436
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=91.63 E-value=0.19 Score=46.41 Aligned_cols=34 Identities=18% Similarity=0.433 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||.|.-|...|..|++.|++|+++|++.
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 437
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.62 E-value=0.14 Score=48.75 Aligned_cols=34 Identities=24% Similarity=0.335 Sum_probs=31.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|..|+.++..|...|.+|+++|++.
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKRLGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999974
No 438
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=91.59 E-value=0.18 Score=46.79 Aligned_cols=34 Identities=26% Similarity=0.361 Sum_probs=31.3
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
.++|.|||+|..|.+.|..|++.|+ +|+++|++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 4689999999999999999999999 899999864
No 439
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=91.56 E-value=0.14 Score=47.12 Aligned_cols=34 Identities=35% Similarity=0.447 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||+|..|...|..|++.|++|++++++.
T Consensus 3 m~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 3 MKQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CCEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 4789999999999999999999999999999864
No 440
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.45 E-value=0.17 Score=46.77 Aligned_cols=32 Identities=25% Similarity=0.485 Sum_probs=29.6
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
+|+|||+|..|.++|..|+..|. +++++|.+.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 69999999999999999999998 899999853
No 441
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=91.38 E-value=0.13 Score=46.99 Aligned_cols=33 Identities=21% Similarity=0.376 Sum_probs=31.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.|||.|.-|...|..|++.|++|+++|++.
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLVRAGFDVTVWNRNP 34 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHTCCEEEECSSG
T ss_pred CeEEEEccCHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999975
No 442
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=91.23 E-value=0.18 Score=46.03 Aligned_cols=33 Identities=18% Similarity=0.414 Sum_probs=31.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.|||.|..|...|..|++.|++|++++++.
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCH
Confidence 579999999999999999999999999999975
No 443
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=91.21 E-value=0.14 Score=49.86 Aligned_cols=32 Identities=28% Similarity=0.431 Sum_probs=30.1
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|+|||+|..|+..|..|++.|++|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 444
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=91.13 E-value=0.2 Score=46.74 Aligned_cols=34 Identities=24% Similarity=0.213 Sum_probs=30.5
Q ss_pred CccEEEEcCCHHHHH-HHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLL-ACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~-~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||.|-+|++ +|..|.++|++|.+.|.+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~ 38 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKM 38 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CcEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 578999999999996 7888889999999999964
No 445
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.09 E-value=0.2 Score=46.29 Aligned_cols=33 Identities=27% Similarity=0.520 Sum_probs=29.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF-HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~~ 36 (418)
++|+|||+|..|..+|..|+..+. +++++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 579999999999999999999886 899999853
No 446
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=91.07 E-value=0.21 Score=43.89 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.4
Q ss_pred CCccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 2 EKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+.+.|+|.|| |..|..++..|++.|.+|+++.++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 55 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNE 55 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECCh
Confidence 4578999997 9999999999999999999999963
No 447
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.97 E-value=0.2 Score=45.99 Aligned_cols=33 Identities=12% Similarity=0.237 Sum_probs=30.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||+|.-|...|..|+ .|++|+++|++.
T Consensus 12 ~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 12 HMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 478999999999999999999 999999999964
No 448
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.76 E-value=0.25 Score=44.74 Aligned_cols=34 Identities=18% Similarity=0.081 Sum_probs=31.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEAR 35 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~ 35 (418)
+.+.++|+|+|-.|.+++..|++.|.+|++++++
T Consensus 118 ~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~ 151 (271)
T 1nyt_A 118 PGLRILLIGAGGASRGVLLPLLSLDCAVTITNRT 151 (271)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECC
Confidence 3468999999999999999999999999999985
No 449
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.73 E-value=0.2 Score=44.85 Aligned_cols=33 Identities=27% Similarity=0.434 Sum_probs=30.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
..+|+|||+|-.|..+|..|++.|. +++|+|+.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d 64 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD 64 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 4689999999999999999999998 89999985
No 450
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.71 E-value=0.21 Score=46.13 Aligned_cols=32 Identities=34% Similarity=0.474 Sum_probs=29.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|+|||+|.-|.+.|..|+ .|.+|++++++.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 67999999999999999999 999999999864
No 451
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.65 E-value=0.22 Score=46.22 Aligned_cols=33 Identities=33% Similarity=0.445 Sum_probs=29.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|+|||+|.-|.+.|..|++.|.+|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 468999999999999999999999999999 643
No 452
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=90.62 E-value=0.21 Score=45.13 Aligned_cols=34 Identities=15% Similarity=0.200 Sum_probs=31.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|+|+|+|..|..++..|.+.|++|+++.++.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALAPQGWRIIGTSRNP 38 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHGGGTCEEEEEESCG
T ss_pred cCcEEEECCcHHHHHHHHHHHHCCCEEEEEEcCh
Confidence 3689999999999999999999999999999865
No 453
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=90.59 E-value=0.26 Score=46.12 Aligned_cols=36 Identities=19% Similarity=0.208 Sum_probs=31.1
Q ss_pred CCCccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|.++.|+|+|| |..|..++..|++.|.+|.++.++.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASLDAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCC
Confidence 55678999998 9999999999999999999999965
No 454
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=90.52 E-value=0.21 Score=40.85 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=32.4
Q ss_pred hhcCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEecCc
Q 014821 199 NLVKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRTEH 240 (418)
Q Consensus 199 ~~~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~~~ 240 (418)
+...+++|+|+|+|..|..+|..|...|.. |+++.|++.
T Consensus 15 ~~~~~~~v~IiG~G~iG~~la~~L~~~g~~---V~vid~~~~ 53 (155)
T 2g1u_A 15 KKQKSKYIVIFGCGRLGSLIANLASSSGHS---VVVVDKNEY 53 (155)
T ss_dssp --CCCCEEEEECCSHHHHHHHHHHHHTTCE---EEEEESCGG
T ss_pred cccCCCcEEEECCCHHHHHHHHHHHhCCCe---EEEEECCHH
Confidence 456678999999999999999999887764 999998764
No 455
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.48 E-value=0.21 Score=48.07 Aligned_cols=34 Identities=29% Similarity=0.409 Sum_probs=31.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|..|+.++..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 3679999999999999999999999999999864
No 456
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.46 E-value=0.26 Score=47.57 Aligned_cols=34 Identities=24% Similarity=0.413 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|..|..++..|.+.|++++++|.+.
T Consensus 4 ~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~ 37 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDP 37 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999875
No 457
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=90.40 E-value=0.24 Score=48.59 Aligned_cols=35 Identities=23% Similarity=0.198 Sum_probs=32.0
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+.++|+|||+|..|...+..|.+.|.+|+++++..
T Consensus 11 ~~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~ 45 (457)
T 1pjq_A 11 RDRDCLIVGGGDVAERKARLLLEAGARLTVNALTF 45 (457)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCCC
Confidence 35789999999999999999999999999999853
No 458
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=90.38 E-value=0.26 Score=42.53 Aligned_cols=32 Identities=25% Similarity=0.273 Sum_probs=29.7
Q ss_pred cEEEEc-CCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVG-AGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG-~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|+||| +|..|..++..|.+.|.+|++++++.
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 699999 99999999999999999999999863
No 459
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=90.38 E-value=0.28 Score=43.57 Aligned_cols=33 Identities=24% Similarity=0.367 Sum_probs=30.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC----ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF----HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~----~v~iie~~~ 36 (418)
++|.|||+|.-|.+.+..|.+.|+ +|.+++++.
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 679999999999999999999998 999999864
No 460
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=90.30 E-value=0.13 Score=50.43 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=31.7
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|+|+|+|-.|..+|..|...|.+++++|++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~ 36 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVGENNDITIVDKDG 36 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCSTTEEEEEEESCH
T ss_pred cCEEEEECCCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4689999999999999999999999999999875
No 461
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=90.19 E-value=0.22 Score=45.98 Aligned_cols=33 Identities=24% Similarity=0.428 Sum_probs=29.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCC--CceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKG--FHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~--~~v~iie~~~ 36 (418)
++|+|||+|..|.++|..|++.| .+++++|++.
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 57999999999999999999988 6899999853
No 462
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=90.09 E-value=0.26 Score=45.70 Aligned_cols=33 Identities=18% Similarity=0.145 Sum_probs=31.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCC-CceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKG-FHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~-~~v~iie~~~ 36 (418)
++|.|||.|.-|..+|..|++.| ++|+++|++.
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence 57999999999999999999999 9999999974
No 463
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=90.08 E-value=0.2 Score=48.19 Aligned_cols=31 Identities=26% Similarity=0.324 Sum_probs=29.0
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|+|||+|..|+.+|..|++ |.+|+++|++.
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 69999999999999999999 99999999864
No 464
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=90.07 E-value=0.23 Score=45.45 Aligned_cols=34 Identities=24% Similarity=0.348 Sum_probs=31.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+++|.|||+|..|...+..|.+.|++|++++++.
T Consensus 4 ~~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 4 SIKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 4689999999999999999999999999999864
No 465
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=90.07 E-value=0.26 Score=45.93 Aligned_cols=33 Identities=24% Similarity=0.440 Sum_probs=30.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~ 35 (418)
.++|+|||+|..|.++|..|+..+. +++++|.+
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 4689999999999999999999887 89999985
No 466
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=89.98 E-value=0.22 Score=43.26 Aligned_cols=36 Identities=31% Similarity=0.437 Sum_probs=31.1
Q ss_pred CC-CccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 ME-KKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~-~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|. +++|+|.|| |..|..++..|++.|.+|++++++.
T Consensus 1 M~~m~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~ 38 (227)
T 3dhn_A 1 MEKVKKIVLIGASGFVGSALLNEALNRGFEVTAVVRHP 38 (227)
T ss_dssp --CCCEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCG
T ss_pred CCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCc
Confidence 54 478999995 9999999999999999999999964
No 467
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.95 E-value=0.28 Score=45.36 Aligned_cols=32 Identities=22% Similarity=0.327 Sum_probs=28.9
Q ss_pred cEEEEcCCHHHHHHHHHHHhC--CCceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLK--GFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~--~~~v~iie~~~ 36 (418)
+|+|||+|..|..+|..|+.. +.+++++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 699999999999999999985 67999999964
No 468
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=89.95 E-value=0.27 Score=45.95 Aligned_cols=33 Identities=24% Similarity=0.371 Sum_probs=30.7
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.+|.|||+|.-|.+.|..|++.|.+|++++++.
T Consensus 15 ~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 15 MRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 579999999999999999999999999999853
No 469
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=89.93 E-value=0.2 Score=46.12 Aligned_cols=37 Identities=27% Similarity=0.466 Sum_probs=28.9
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCCCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARSDI 38 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~~~ 38 (418)
|. ++|.+||-|.-|...|.+|++.|++|+++|++...
T Consensus 4 Ms-~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 4 MS-EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CC-CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CC-CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 44 46999999999999999999999999999987643
No 470
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=89.92 E-value=0.27 Score=46.97 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=30.9
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|||+|..|+.++..|...|.+|+++|++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 471
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=89.86 E-value=0.24 Score=46.02 Aligned_cols=32 Identities=34% Similarity=0.568 Sum_probs=29.5
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
+|+|||+|..|.++|..|+..|. +++++|++.
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 69999999999999999999998 899999853
No 472
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.82 E-value=0.24 Score=45.36 Aligned_cols=33 Identities=24% Similarity=0.467 Sum_probs=30.4
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.|||+|..|...+..|.+.|++|.+++++.
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999864
No 473
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.80 E-value=0.24 Score=46.08 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=28.9
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEee
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEA 34 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~ 34 (418)
+|.|||+|..|...|..|++.|.+|+++++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 699999999999999999999999999998
No 474
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=89.79 E-value=0.33 Score=45.31 Aligned_cols=34 Identities=21% Similarity=0.457 Sum_probs=30.6
Q ss_pred CCccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeC
Q 014821 2 EKKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (418)
Q Consensus 2 ~~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~ 35 (418)
..++|+|||+|..|.++|..|+..+. +++++|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 35789999999999999999999887 89999985
No 475
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.78 E-value=0.31 Score=44.75 Aligned_cols=33 Identities=21% Similarity=0.108 Sum_probs=30.5
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
.++++|||+|-+|.+++..|++.|. +|+|++|+
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~ 174 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRT 174 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSS
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCC
Confidence 4689999999999999999999998 89999985
No 476
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=89.75 E-value=0.33 Score=47.58 Aligned_cols=35 Identities=23% Similarity=0.057 Sum_probs=30.8
Q ss_pred cCCCEEEEEcCCCCHHHHHHHHhhhcCCCCCeEEEEec
Q 014821 201 VKGKRVTVVGLQKSALDIAMECTTANGLENPCTVLYRT 238 (418)
Q Consensus 201 ~~~~~v~VvG~G~sa~e~a~~l~~~~~~~~~V~~~~r~ 238 (418)
.++++|+|||+|.+|...+..|.+.|.. |+++.+.
T Consensus 10 l~~~~vlVvGgG~va~~k~~~L~~~ga~---V~vi~~~ 44 (457)
T 1pjq_A 10 LRDRDCLIVGGGDVAERKARLLLEAGAR---LTVNALT 44 (457)
T ss_dssp CBTCEEEEECCSHHHHHHHHHHHHTTBE---EEEEESS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCE---EEEEcCC
Confidence 4579999999999999999999998875 9998863
No 477
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.70 E-value=0.31 Score=44.16 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=30.0
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
++|.|||+|..|.+.|..|.+.|. +|+++|++.
T Consensus 2 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred cEEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 579999999999999999999998 899999864
No 478
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=89.70 E-value=0.34 Score=43.74 Aligned_cols=33 Identities=27% Similarity=0.271 Sum_probs=30.6
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++++|||+|-+|-+++..|.+.|.+++|++|..
T Consensus 119 k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~ 151 (269)
T 3phh_A 119 QNALILGAGGSAKALACELKKQGLQVSVLNRSS 151 (269)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 679999999999999999999999999999964
No 479
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=89.69 E-value=0.25 Score=48.30 Aligned_cols=36 Identities=19% Similarity=0.188 Sum_probs=32.3
Q ss_pred CCCccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|+.+.|+|+|+|..|.+++..|++.|.+|++++++.
T Consensus 1 M~~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~ 36 (450)
T 1ff9_A 1 MATKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTL 36 (450)
T ss_dssp -CCCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCH
Confidence 777899999999999999999999999999999864
No 480
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=89.61 E-value=0.32 Score=46.05 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
..+|+|+|+|.+|.+++..|...|.+|++++++.
T Consensus 167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3689999999999999999999999999999864
No 481
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=89.53 E-value=0.38 Score=45.93 Aligned_cols=34 Identities=24% Similarity=0.356 Sum_probs=31.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.+.|+|||+|..|..++..+.+.|++++++|...
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~ 47 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTK 47 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHHHTTCEEEEEESST
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCC
Confidence 4689999999999999999999999999999865
No 482
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=89.43 E-value=0.31 Score=45.38 Aligned_cols=33 Identities=18% Similarity=0.339 Sum_probs=30.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEAR 35 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~ 35 (418)
.++|+|||+|..|.++|..|+..+. +++++|.+
T Consensus 9 ~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 4689999999999999999999887 89999985
No 483
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=89.32 E-value=0.38 Score=41.39 Aligned_cols=32 Identities=22% Similarity=0.285 Sum_probs=29.6
Q ss_pred cEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|+|+|| |..|..++..|+++|.+|+++.|+.
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5999995 9999999999999999999999964
No 484
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=89.31 E-value=0.33 Score=43.88 Aligned_cols=32 Identities=25% Similarity=0.310 Sum_probs=29.7
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|.|||+|..|.+.|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 69999999999999999999999999999864
No 485
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=89.23 E-value=0.35 Score=45.89 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=31.2
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.+.|+|+|+|..|..++..|+..|.+|+++|++.
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999863
No 486
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=89.22 E-value=0.35 Score=44.00 Aligned_cols=33 Identities=27% Similarity=0.340 Sum_probs=30.7
Q ss_pred ccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.|||+ |..|..+|..|.+.|++|++++++.
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 58999999 9999999999999999999999864
No 487
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=89.20 E-value=0.27 Score=46.74 Aligned_cols=34 Identities=15% Similarity=0.056 Sum_probs=30.9
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCC-------CceEEEeeCCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKG-------FHPIVFEARSD 37 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~-------~~v~iie~~~~ 37 (418)
++|.|||+|.-|.+.|..|++.| .+|++++++..
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 57999999999999999999988 89999998653
No 488
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.18 E-value=0.35 Score=44.81 Aligned_cols=36 Identities=36% Similarity=0.471 Sum_probs=31.7
Q ss_pred CCCccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 MEKKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|+.+.|+|.|| |..|..++..|++.|.+|++++++.
T Consensus 1 m~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~ 37 (345)
T 2z1m_A 1 MSGKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRS 37 (345)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCC
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCC
Confidence 66788999997 9999999999999999999999865
No 489
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=89.17 E-value=0.34 Score=50.40 Aligned_cols=34 Identities=29% Similarity=0.464 Sum_probs=31.6
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.++|.|||+|.-|..+|..|++.|++|+++|++.
T Consensus 312 ~~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 345 (725)
T 2wtb_A 312 IKKVAIIGGGLMGSGIATALILSNYPVILKEVNE 345 (725)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CcEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCH
Confidence 4679999999999999999999999999999964
No 490
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=89.15 E-value=0.29 Score=44.45 Aligned_cols=32 Identities=22% Similarity=0.381 Sum_probs=29.5
Q ss_pred ccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.|||+|..|...|..|.+ |++|++++++.
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred CeEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 479999999999999999999 99999999864
No 491
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=89.13 E-value=0.35 Score=44.16 Aligned_cols=36 Identities=28% Similarity=0.367 Sum_probs=32.0
Q ss_pred CC-CccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 1 ME-KKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 1 m~-~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
|. ++.|+|+|| |..|..++..|++.|.+|+++.|+.
T Consensus 1 M~~~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~ 38 (308)
T 1qyc_A 1 MGSRSRILLIGATGYIGRHVAKASLDLGHPTFLLVRES 38 (308)
T ss_dssp -CCCCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCc
Confidence 65 678999997 9999999999999999999999864
No 492
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=89.08 E-value=0.44 Score=43.39 Aligned_cols=36 Identities=17% Similarity=0.311 Sum_probs=32.0
Q ss_pred ccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCCCCC
Q 014821 4 KQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARSDIG 39 (418)
Q Consensus 4 ~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~~~g 39 (418)
++|+|.|| |+.|-.++..|.++|++|+++.|++..+
T Consensus 1 MkILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~~ 37 (298)
T 4b4o_A 1 MRVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGPG 37 (298)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCcC
Confidence 35999998 9999999999999999999999876543
No 493
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=89.05 E-value=0.37 Score=44.20 Aligned_cols=33 Identities=30% Similarity=0.513 Sum_probs=30.6
Q ss_pred ccEEEEc-CCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 4 KQIAIVG-AGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 4 ~~vvIIG-~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
++|.||| +|..|.++|..|++.|.+|++++++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999864
No 494
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=89.03 E-value=0.32 Score=44.80 Aligned_cols=34 Identities=21% Similarity=0.416 Sum_probs=30.0
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
+++|+|||+|..|...|..|+..+. +++++|.+.
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISAKGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCc
Confidence 3689999999999999999999888 899999864
No 495
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.03 E-value=0.37 Score=45.89 Aligned_cols=34 Identities=21% Similarity=0.314 Sum_probs=31.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.+.|+|||+|..|..++..|...|.+|+++|++.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4689999999999999999999999999999864
No 496
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=89.00 E-value=0.31 Score=44.14 Aligned_cols=34 Identities=18% Similarity=0.113 Sum_probs=31.1
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
.+.++|+|+|-+|.+++..|++.|.+++|++|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4689999999999999999999999999999963
No 497
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=88.92 E-value=0.3 Score=44.69 Aligned_cols=33 Identities=27% Similarity=0.428 Sum_probs=30.4
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC-ceEEEeeC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF-HPIVFEAR 35 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~-~v~iie~~ 35 (418)
..+|+|||+|-.|..+|.+|++.|+ +++|+|..
T Consensus 36 ~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D 69 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYD 69 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence 4689999999999999999999998 89999984
No 498
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=88.91 E-value=0.34 Score=44.20 Aligned_cols=32 Identities=22% Similarity=0.466 Sum_probs=29.9
Q ss_pred cEEEEcCCHHHHHHHHHHHhCCCceEEEeeCC
Q 014821 5 QIAIVGAGVSGLLACKYLLLKGFHPIVFEARS 36 (418)
Q Consensus 5 ~vvIIG~G~aGl~~a~~L~~~~~~v~iie~~~ 36 (418)
+|.|||+|..|...|..|.+.|++|++++++.
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999864
No 499
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=88.82 E-value=0.36 Score=44.73 Aligned_cols=34 Identities=21% Similarity=0.412 Sum_probs=29.8
Q ss_pred CccEEEEcCCHHHHHHHHHHHhCCC--ceEEEeeCC
Q 014821 3 KKQIAIVGAGVSGLLACKYLLLKGF--HPIVFEARS 36 (418)
Q Consensus 3 ~~~vvIIG~G~aGl~~a~~L~~~~~--~v~iie~~~ 36 (418)
.++|+|||+|..|.++|..|+..+. +++++|.+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 4689999999999999999988775 799999853
No 500
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=88.77 E-value=0.42 Score=43.75 Aligned_cols=35 Identities=26% Similarity=0.307 Sum_probs=32.2
Q ss_pred CccEEEEcC-CHHHHHHHHHHHhCCCceEEEeeCCC
Q 014821 3 KKQIAIVGA-GVSGLLACKYLLLKGFHPIVFEARSD 37 (418)
Q Consensus 3 ~~~vvIIG~-G~aGl~~a~~L~~~~~~v~iie~~~~ 37 (418)
++.|+|.|| |..|..++..|++.|.+|+++++...
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 578999998 99999999999999999999998653
Done!