Query 014822
Match_columns 418
No_of_seqs 264 out of 2164
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 18:26:45 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014822.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014822hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dva_I Dihydrolipoyllysine-res 100.0 6.2E-91 2.1E-95 705.5 1.2 401 1-418 7-426 (428)
2 3l60_A Branched-chain alpha-ke 100.0 1E-58 3.5E-63 437.1 23.5 216 201-417 18-239 (250)
3 1scz_A E2, dihydrolipoamide su 100.0 4.8E-59 1.6E-63 436.6 20.5 220 197-418 4-231 (233)
4 1dpb_A Dihydrolipoyl-transacet 100.0 1.4E-58 4.8E-63 436.0 23.7 221 197-418 15-243 (243)
5 2ii3_A Lipoamide acyltransfera 100.0 9.8E-59 3.4E-63 440.8 22.8 223 196-418 30-259 (262)
6 3mae_A 2-oxoisovalerate dehydr 100.0 2.3E-58 7.8E-63 436.2 21.7 221 195-417 16-244 (256)
7 3b8k_A PDCE2;, dihydrolipoylly 100.0 1.2E-58 4E-63 436.0 15.5 222 196-418 11-239 (239)
8 3rqc_A Probable lipoamide acyl 100.0 8.7E-57 3E-61 418.9 20.4 213 197-418 6-222 (224)
9 1q23_A Chloramphenicol acetylt 100.0 1.2E-43 4E-48 329.2 25.1 188 212-414 23-216 (219)
10 3cla_A Type III chloramphenico 100.0 3.7E-43 1.3E-47 324.7 24.9 192 207-412 13-210 (213)
11 2xt6_A 2-oxoglutarate decarbox 100.0 1.7E-44 6E-49 400.4 14.9 205 212-416 1-225 (1113)
12 2i9d_A Chloramphenicol acetylt 100.0 4.6E-42 1.6E-46 317.7 23.2 196 202-410 10-216 (217)
13 1zy8_K Pyruvate dehydrogenase 100.0 1.9E-30 6.4E-35 241.1 4.5 161 1-179 8-169 (229)
14 2dne_A Dihydrolipoyllysine-res 99.8 1.4E-18 4.9E-23 142.9 10.3 80 1-80 12-92 (108)
15 1y8o_B Dihydrolipoyllysine-res 99.8 3.2E-18 1.1E-22 144.4 10.4 76 1-76 32-108 (128)
16 3crk_C Dihydrolipoyllysine-res 99.7 6.5E-18 2.2E-22 133.7 9.8 75 1-75 10-85 (87)
17 2dnc_A Pyruvate dehydrogenase 99.7 9.2E-18 3.1E-22 135.7 8.4 74 1-74 12-86 (98)
18 1k8m_A E2 component of branche 99.7 1.6E-17 5.6E-22 133.0 8.4 73 1-73 9-81 (93)
19 1ghj_A E2, E2, the dihydrolipo 99.7 5.2E-17 1.8E-21 126.0 7.7 72 1-72 6-77 (79)
20 2l5t_A Lipoamide acyltransfera 99.6 4.1E-16 1.4E-20 120.3 7.1 71 1-71 6-76 (77)
21 1pmr_A Dihydrolipoyl succinylt 99.6 1.9E-17 6.4E-22 128.9 -1.4 72 1-72 7-78 (80)
22 1qjo_A Dihydrolipoamide acetyl 99.6 7.7E-16 2.6E-20 119.6 7.5 71 1-73 7-77 (80)
23 1iyu_A E2P, dihydrolipoamide a 99.6 3.5E-15 1.2E-19 115.6 8.0 70 1-73 6-75 (79)
24 1gjx_A Pyruvate dehydrogenase; 99.6 1.9E-15 6.5E-20 117.7 4.2 72 1-73 7-78 (81)
25 1z6h_A Biotin/lipoyl attachmen 99.4 5.9E-13 2E-17 100.9 8.6 65 9-73 6-70 (72)
26 2kcc_A Acetyl-COA carboxylase 99.4 2.5E-13 8.7E-18 106.4 5.6 66 8-74 11-76 (84)
27 2k7v_A Dihydrolipoyllysine-res 99.4 4.5E-14 1.6E-18 110.9 0.2 63 11-73 11-73 (85)
28 2dn8_A Acetyl-COA carboxylase 99.3 2.1E-12 7.1E-17 104.6 8.0 64 9-73 24-87 (100)
29 2d5d_A Methylmalonyl-COA decar 99.3 8.3E-12 2.8E-16 94.9 8.8 63 9-71 12-74 (74)
30 1dcz_A Transcarboxylase 1.3S s 99.3 8.4E-12 2.9E-16 95.7 8.5 63 9-71 15-77 (77)
31 2jku_A Propionyl-COA carboxyla 99.3 9.3E-13 3.2E-17 105.4 2.9 62 9-70 32-93 (94)
32 1bdo_A Acetyl-COA carboxylase; 99.3 6.6E-12 2.3E-16 97.2 7.0 62 10-71 12-80 (80)
33 2eq9_C Pyruvate dehydrogenase 99.3 2.7E-12 9.3E-17 86.3 4.0 39 140-178 2-40 (41)
34 3rnm_E Lipoamide acyltransfera 99.2 3.2E-12 1.1E-16 92.0 3.8 42 138-179 7-48 (58)
35 2ejm_A Methylcrotonoyl-COA car 99.2 1.1E-11 3.6E-16 100.2 6.9 66 9-74 21-86 (99)
36 2eq8_C Pyruvate dehydrogenase 99.2 6.6E-12 2.3E-16 84.0 4.2 37 141-177 2-38 (40)
37 2eq7_C 2-oxoglutarate dehydrog 99.2 4.4E-12 1.5E-16 84.8 2.2 37 141-177 2-38 (40)
38 3n6r_A Propionyl-COA carboxyla 99.1 4.7E-11 1.6E-15 127.7 8.5 62 10-71 620-681 (681)
39 1w85_I Dihydrolipoyllysine-res 99.1 2.4E-11 8.1E-16 84.9 3.6 41 138-178 6-46 (49)
40 1w4i_A Pyruvate dehydrogenase 99.1 4.7E-11 1.6E-15 87.5 4.9 43 138-180 4-46 (62)
41 3va7_A KLLA0E08119P; carboxyla 99.1 1.2E-10 4.3E-15 131.1 8.7 61 10-70 1175-1235(1236)
42 1bal_A Dihydrolipoamide succin 99.1 3.9E-11 1.3E-15 84.5 2.5 40 138-177 9-48 (51)
43 2f60_K Pyruvate dehydrogenase 99.1 5.5E-11 1.9E-15 87.5 3.2 42 138-179 9-50 (64)
44 3hbl_A Pyruvate carboxylase; T 99.1 1.7E-10 5.7E-15 129.6 8.4 64 10-73 1085-1148(1150)
45 3u9t_A MCC alpha, methylcroton 99.1 1.6E-11 5.4E-16 131.3 0.0 64 10-73 610-673 (675)
46 2coo_A Lipoamide acyltransfera 99.0 2.4E-10 8.3E-15 85.6 6.1 42 138-179 15-56 (70)
47 2k32_A A; NMR {Campylobacter j 98.9 1.8E-09 6E-14 89.5 5.3 68 9-76 8-105 (116)
48 1zko_A Glycine cleavage system 98.8 4.6E-09 1.6E-13 89.1 6.8 64 11-74 45-116 (136)
49 3bg3_A Pyruvate carboxylase, m 98.8 1.1E-09 3.7E-14 116.9 2.7 61 10-70 657-717 (718)
50 2qf7_A Pyruvate carboxylase pr 98.8 4.3E-09 1.5E-13 118.5 5.3 62 10-71 1103-1164(1165)
51 1hpc_A H protein of the glycin 98.4 1.3E-07 4.5E-12 79.7 4.0 63 11-73 36-106 (131)
52 1onl_A Glycine cleavage system 98.4 3.7E-07 1.3E-11 76.7 6.5 63 11-73 36-106 (128)
53 3a7l_A H-protein, glycine clea 98.4 3.3E-07 1.1E-11 76.9 5.6 63 11-73 37-107 (128)
54 3ne5_B Cation efflux system pr 98.0 7.5E-06 2.6E-10 82.4 6.8 65 9-73 128-241 (413)
55 2f1m_A Acriflavine resistance 97.9 2.8E-06 9.6E-11 80.5 2.8 65 9-73 29-166 (277)
56 3lnn_A Membrane fusion protein 97.9 8.6E-06 2.9E-10 80.1 6.3 66 9-74 64-206 (359)
57 3fpp_A Macrolide-specific effl 97.9 1E-05 3.5E-10 78.9 6.0 65 9-73 38-190 (341)
58 3klr_A Glycine cleavage system 97.9 1.7E-05 5.8E-10 66.0 5.9 49 11-59 32-81 (125)
59 3mxu_A Glycine cleavage system 97.8 3.4E-05 1.2E-09 65.4 5.9 49 11-59 54-103 (143)
60 3tzu_A GCVH, glycine cleavage 97.7 3.5E-05 1.2E-09 65.0 5.2 44 11-54 49-93 (137)
61 1vf7_A Multidrug resistance pr 97.7 1.6E-05 5.3E-10 78.8 2.8 65 9-73 50-173 (369)
62 3hgb_A Glycine cleavage system 97.5 0.00014 4.8E-09 62.3 5.9 44 11-54 59-103 (155)
63 4dk0_A Putative MACA; alpha-ha 97.3 1.7E-05 5.7E-10 78.2 -2.4 64 9-72 39-190 (369)
64 3na6_A Succinylglutamate desuc 96.7 0.0033 1.1E-07 61.1 7.7 59 13-73 267-329 (331)
65 2dn8_A Acetyl-COA carboxylase 96.6 0.00071 2.4E-08 53.9 2.1 47 27-73 5-51 (100)
66 3cdx_A Succinylglutamatedesucc 96.5 0.005 1.7E-07 60.4 7.7 59 13-73 277-339 (354)
67 3fmc_A Putative succinylglutam 96.4 0.0054 1.9E-07 60.5 7.6 59 12-72 299-363 (368)
68 1z6h_A Biotin/lipoyl attachmen 96.0 0.0053 1.8E-07 45.3 3.8 33 41-73 1-33 (72)
69 2d5d_A Methylmalonyl-COA decar 95.9 0.0076 2.6E-07 44.5 4.3 34 40-73 6-39 (74)
70 1dcz_A Transcarboxylase 1.3S s 95.9 0.0067 2.3E-07 45.4 4.0 35 39-73 8-42 (77)
71 1f3z_A EIIA-GLC, glucose-speci 95.7 0.0084 2.9E-07 51.9 4.4 59 9-71 19-116 (161)
72 2k32_A A; NMR {Campylobacter j 95.6 0.01 3.6E-07 48.2 4.2 34 40-73 2-35 (116)
73 2gpr_A Glucose-permease IIA co 95.4 0.011 3.8E-07 50.8 3.9 59 9-71 14-111 (154)
74 2kcc_A Acetyl-COA carboxylase 95.2 0.0095 3.3E-07 45.6 2.7 35 40-74 6-40 (84)
75 1ax3_A Iiaglc, glucose permeas 95.1 0.012 4.1E-07 51.0 3.3 59 9-71 19-116 (162)
76 2qj8_A MLR6093 protein; struct 94.8 0.052 1.8E-06 52.5 7.2 60 11-72 265-328 (332)
77 2f1m_A Acriflavine resistance 94.5 0.033 1.1E-06 52.1 5.0 55 19-74 3-57 (277)
78 2jku_A Propionyl-COA carboxyla 94.5 0.019 6.6E-07 44.9 2.7 36 39-74 25-60 (94)
79 2xha_A NUSG, transcription ant 94.4 0.043 1.5E-06 48.6 5.0 32 15-52 22-53 (193)
80 2ejm_A Methylcrotonoyl-COA car 94.3 0.026 8.9E-07 44.6 3.1 36 39-74 14-49 (99)
81 1bdo_A Acetyl-COA carboxylase; 93.8 0.031 1.1E-06 42.0 2.6 35 40-74 5-46 (80)
82 3fpp_A Macrolide-specific effl 93.3 0.069 2.4E-06 51.5 4.8 58 16-74 9-66 (341)
83 3lnn_A Membrane fusion protein 92.9 0.059 2E-06 52.4 3.6 57 18-74 35-92 (359)
84 2l5t_A Lipoamide acyltransfera 92.5 0.11 3.8E-06 38.6 3.9 27 9-35 51-77 (77)
85 3d4r_A Domain of unknown funct 92.3 0.15 5.3E-06 43.6 4.8 47 10-56 108-155 (169)
86 1gjx_A Pyruvate dehydrogenase; 91.9 0.11 3.9E-06 38.9 3.4 33 42-74 10-42 (81)
87 1qjo_A Dihydrolipoamide acetyl 91.8 0.15 5.1E-06 38.1 3.9 28 47-74 14-41 (80)
88 2xhc_A Transcription antitermi 91.8 0.17 5.8E-06 49.3 5.3 32 15-52 62-93 (352)
89 4hvm_A Tlmii; PSI-biology, mid 91.8 3.4 0.00012 41.2 15.3 62 197-271 11-72 (493)
90 2k7v_A Dihydrolipoyllysine-res 91.7 0.015 5E-07 44.6 -1.9 35 40-74 3-37 (85)
91 1k8m_A E2 component of branche 91.7 0.17 5.8E-06 39.3 4.2 30 45-74 16-45 (93)
92 1ghj_A E2, E2, the dihydrolipo 91.5 0.067 2.3E-06 40.1 1.6 31 44-74 12-42 (79)
93 3crk_C Dihydrolipoyllysine-res 91.5 0.12 4.2E-06 39.5 3.2 30 45-74 17-46 (87)
94 2dnc_A Pyruvate dehydrogenase 90.9 0.15 5.2E-06 40.1 3.2 29 46-74 20-48 (98)
95 3ne5_B Cation efflux system pr 90.7 0.22 7.7E-06 49.5 5.0 58 17-74 98-157 (413)
96 1vf7_A Multidrug resistance pr 90.4 0.14 4.9E-06 50.0 3.2 57 17-74 22-78 (369)
97 1l5a_A Amide synthase, VIBH; n 89.9 6.4 0.00022 38.3 14.9 29 383-411 118-146 (436)
98 1iyu_A E2P, dihydrolipoamide a 89.6 0.25 8.5E-06 36.8 3.3 28 9-36 48-75 (79)
99 4dk0_A Putative MACA; alpha-ha 89.4 0.1 3.4E-06 50.8 1.2 57 17-74 11-67 (369)
100 2dne_A Dihydrolipoyllysine-res 89.0 0.18 6.2E-06 40.4 2.3 29 46-74 20-48 (108)
101 2auk_A DNA-directed RNA polyme 88.9 0.4 1.4E-05 42.4 4.7 45 15-61 63-107 (190)
102 1y8o_B Dihydrolipoyllysine-res 88.9 0.37 1.3E-05 39.9 4.1 36 39-74 27-68 (128)
103 2xha_A NUSG, transcription ant 88.2 0.17 5.9E-06 44.7 1.8 46 18-69 85-158 (193)
104 1pmr_A Dihydrolipoyl succinylt 88.1 0.097 3.3E-06 39.3 0.1 30 45-74 14-43 (80)
105 3fot_A 15-O-acetyltransferase; 88.0 4 0.00014 41.8 12.1 39 224-262 280-321 (519)
106 3our_B EIIA, phosphotransferas 87.7 0.75 2.6E-05 40.3 5.4 43 27-72 62-139 (183)
107 3n6r_A Propionyl-COA carboxyla 87.5 0.41 1.4E-05 50.9 4.5 36 39-74 612-647 (681)
108 3bg3_A Pyruvate carboxylase, m 82.5 0.8 2.7E-05 48.8 3.8 35 40-74 650-684 (718)
109 3hbl_A Pyruvate carboxylase; T 82.2 0.93 3.2E-05 51.0 4.4 35 40-74 1078-1112(1150)
110 3va7_A KLLA0E08119P; carboxyla 82.1 0.89 3.1E-05 51.5 4.2 37 39-75 1167-1203(1236)
111 3u9t_A MCC alpha, methylcroton 78.9 0.4 1.4E-05 50.9 0.0 35 40-74 603-637 (675)
112 3lu0_D DNA-directed RNA polyme 78.1 1.5 5E-05 49.4 4.1 35 15-51 1002-1036(1407)
113 2bco_A Succinylglutamate desuc 77.8 1.6 5.6E-05 42.3 4.0 50 17-73 280-329 (350)
114 2qf7_A Pyruvate carboxylase pr 75.9 1.7 6E-05 48.9 4.1 35 40-74 1096-1130(1165)
115 2gpr_A Glucose-permease IIA co 74.8 0.99 3.4E-05 38.5 1.3 24 14-37 91-114 (154)
116 2xhc_A Transcription antitermi 73.9 0.69 2.4E-05 45.0 0.1 28 18-51 125-152 (352)
117 3our_B EIIA, phosphotransferas 71.2 2.2 7.5E-05 37.3 2.7 27 11-37 115-141 (183)
118 2vsq_A Surfactin synthetase su 69.5 38 0.0013 38.3 13.3 28 384-411 140-167 (1304)
119 1zy8_K Pyruvate dehydrogenase 69.4 0.96 3.3E-05 41.2 0.0 31 45-75 15-45 (229)
120 1l5a_A Amide synthase, VIBH; n 66.8 91 0.0031 29.8 17.2 162 223-411 210-402 (436)
121 3dva_I Dihydrolipoyllysine-res 66.3 1.2 4.2E-05 44.5 0.0 29 9-37 52-80 (428)
122 2bgh_A Vinorine synthase; VS, 65.6 5.1 0.00017 39.5 4.4 30 383-412 152-181 (421)
123 3fmc_A Putative succinylglutam 62.1 5.5 0.00019 38.8 3.8 34 38-72 289-322 (368)
124 2xr7_A Malonyltransferase; xen 61.6 5.9 0.0002 39.3 4.1 29 383-411 157-185 (453)
125 1f3z_A EIIA-GLC, glucose-speci 61.5 4.5 0.00015 34.7 2.7 22 15-36 97-118 (161)
126 2dsj_A Pyrimidine-nucleoside ( 61.2 9.1 0.00031 38.0 5.2 42 33-75 322-394 (423)
127 2e1v_A Acyl transferase; BAHD 60.5 7.1 0.00024 38.8 4.4 29 383-411 162-190 (454)
128 2rkv_A Trichothecene 3-O-acety 59.8 6.9 0.00023 38.8 4.2 30 383-412 148-177 (451)
129 4g22_A Hydroxycinnamoyl-COA sh 59.0 8.2 0.00028 38.2 4.6 30 383-412 150-179 (439)
130 1brw_A PYNP, protein (pyrimidi 58.9 9.5 0.00032 38.0 4.9 42 33-74 329-401 (433)
131 3na6_A Succinylglutamate desuc 58.4 6.8 0.00023 37.5 3.7 36 37-73 255-290 (331)
132 3h5q_A PYNP, pyrimidine-nucleo 57.7 10 0.00036 37.7 5.0 37 35-71 334-401 (436)
133 1qpo_A Quinolinate acid phosph 57.6 7.1 0.00024 36.6 3.6 22 13-34 72-93 (284)
134 1ax3_A Iiaglc, glucose permeas 56.5 4.3 0.00015 34.8 1.7 24 14-37 96-119 (162)
135 2tpt_A Thymidine phosphorylase 55.9 12 0.0004 37.4 5.0 43 33-75 334-407 (440)
136 3tqv_A Nicotinate-nucleotide p 55.4 6.8 0.00023 36.8 3.0 21 14-34 77-97 (287)
137 1o4u_A Type II quinolic acid p 55.2 6.5 0.00022 36.9 2.8 21 14-34 73-93 (285)
138 1x1o_A Nicotinate-nucleotide p 54.9 6.9 0.00024 36.7 3.0 21 14-34 74-94 (286)
139 3l0g_A Nicotinate-nucleotide p 54.6 7.4 0.00025 36.7 3.1 21 14-34 86-106 (300)
140 2b7n_A Probable nicotinate-nuc 54.4 8.7 0.0003 35.7 3.6 19 54-72 63-81 (273)
141 3gnn_A Nicotinate-nucleotide p 52.8 7.9 0.00027 36.5 3.0 21 14-34 88-108 (298)
142 3paj_A Nicotinate-nucleotide p 51.8 8.3 0.00028 36.8 3.0 21 14-34 110-130 (320)
143 1qap_A Quinolinic acid phospho 50.2 9.1 0.00031 36.1 3.0 21 14-34 87-107 (296)
144 3it5_A Protease LASA; metallop 50.2 6.3 0.00022 34.4 1.8 19 54-72 86-104 (182)
145 2jgp_A Tyrocidine synthetase 3 46.5 2.2E+02 0.0075 27.9 17.7 167 224-415 306-512 (520)
146 3h5q_A PYNP, pyrimidine-nucleo 46.3 10 0.00035 37.7 2.8 28 7-34 374-401 (436)
147 1zko_A Glycine cleavage system 46.1 4.1 0.00014 33.9 -0.1 33 42-74 39-72 (136)
148 2jbm_A Nicotinate-nucleotide p 45.8 10 0.00035 35.8 2.6 19 54-72 76-94 (299)
149 2vsq_A Surfactin synthetase su 44.0 3.2E+02 0.011 30.8 15.1 162 224-411 231-426 (1304)
150 1uou_A Thymidine phosphorylase 42.5 23 0.00078 35.6 4.7 42 33-74 366-436 (474)
151 3it5_A Protease LASA; metallop 42.5 23 0.00078 30.8 4.1 15 40-54 49-63 (182)
152 1q9j_A PAPA5, polyketide synth 41.7 17 0.00059 34.8 3.7 28 384-411 117-144 (422)
153 2dsj_A Pyrimidine-nucleoside ( 41.3 16 0.00054 36.3 3.2 30 8-37 364-393 (423)
154 1brw_A PYNP, protein (pyrimidi 40.9 16 0.00054 36.4 3.2 30 8-37 372-401 (433)
155 3cdx_A Succinylglutamatedesucc 40.7 24 0.00081 33.9 4.4 36 37-73 265-300 (354)
156 3tuf_B Stage II sporulation pr 40.2 12 0.00042 34.2 2.1 26 11-36 130-155 (245)
157 1qwy_A Peptidoglycan hydrolase 39.8 13 0.00044 34.9 2.2 21 53-73 239-259 (291)
158 3d4r_A Domain of unknown funct 39.7 18 0.00061 30.9 2.9 41 23-74 95-135 (169)
159 1hpc_A H protein of the glycin 39.7 16 0.00054 30.0 2.5 33 42-74 30-63 (131)
160 2hsi_A Putative peptidase M23; 39.5 13 0.00045 34.7 2.2 20 15-34 231-250 (282)
161 1uou_A Thymidine phosphorylase 38.9 18 0.00063 36.3 3.4 30 8-37 407-436 (474)
162 1baz_A ARC repressor; transcri 38.7 75 0.0026 21.4 5.5 46 219-266 7-52 (53)
163 1q9j_A PAPA5, polyketide synth 38.0 2.1E+02 0.0072 26.9 10.9 86 224-320 214-314 (422)
164 3lu0_D DNA-directed RNA polyme 37.2 7.6 0.00026 43.8 0.2 23 16-38 1107-1131(1407)
165 3tuf_B Stage II sporulation pr 36.2 31 0.001 31.5 4.1 22 52-73 134-155 (245)
166 2lmc_B DNA-directed RNA polyme 34.5 4.9 0.00017 30.5 -1.3 15 17-31 68-82 (84)
167 2hsi_A Putative peptidase M23; 34.0 35 0.0012 31.8 4.2 23 52-74 231-253 (282)
168 3nyy_A Putative glycyl-glycine 33.4 18 0.00062 33.2 2.1 19 54-72 183-201 (252)
169 3c2e_A Nicotinate-nucleotide p 33.3 19 0.00066 33.7 2.3 9 358-366 272-280 (294)
170 3vr4_A V-type sodium ATPase ca 32.8 63 0.0022 33.3 6.2 53 17-72 130-185 (600)
171 2tpt_A Thymidine phosphorylase 32.7 16 0.00056 36.4 1.8 30 8-37 377-406 (440)
172 2jgp_A Tyrocidine synthetase 3 32.6 33 0.0011 34.1 4.2 30 383-412 214-243 (520)
173 4etm_A LMPTP, low molecular we 32.1 26 0.0009 30.0 2.9 33 140-176 67-99 (173)
174 3nyy_A Putative glycyl-glycine 32.0 39 0.0013 30.9 4.1 16 40-55 140-155 (252)
175 4hvm_A Tlmii; PSI-biology, mid 30.9 2.7E+02 0.0091 27.0 10.6 95 221-321 215-329 (493)
176 1onl_A Glycine cleavage system 30.4 10 0.00035 31.0 -0.1 32 43-74 31-63 (128)
177 2gu1_A Zinc peptidase; alpha/b 28.8 45 0.0015 32.0 4.2 23 52-74 283-305 (361)
178 1jf8_A Arsenate reductase; ptp 28.5 34 0.0012 27.7 2.8 32 140-175 43-74 (131)
179 2gu1_A Zinc peptidase; alpha/b 28.4 25 0.00085 33.9 2.2 25 12-36 280-304 (361)
180 2qj8_A MLR6093 protein; struct 27.8 43 0.0015 31.7 3.8 34 39-73 257-290 (332)
181 3fot_A 15-O-acetyltransferase; 27.5 59 0.002 33.0 5.0 32 382-413 177-208 (519)
182 3csq_A Morphogenesis protein 1 26.8 21 0.0007 34.2 1.3 22 15-36 250-271 (334)
183 2xhg_A Tyrocidine synthetase A 26.5 43 0.0015 32.5 3.7 62 196-271 14-75 (466)
184 3rh0_A Arsenate reductase; oxi 26.3 40 0.0014 28.1 2.8 33 140-176 61-93 (148)
185 1qwy_A Peptidoglycan hydrolase 25.4 1.8E+02 0.0063 27.0 7.5 17 40-56 196-212 (291)
186 1yw4_A Succinylglutamate desuc 25.3 14 0.00047 35.5 -0.3 35 17-51 278-317 (341)
187 2fek_A Low molecular weight pr 24.3 45 0.0016 28.3 2.9 33 140-176 64-96 (167)
188 3qoq_A Alginate and motility r 24.2 1.3E+02 0.0045 21.6 4.9 43 217-261 17-59 (69)
189 2gi4_A Possible phosphotyrosin 24.1 31 0.0011 28.9 1.8 31 140-174 50-80 (156)
190 2cwd_A Low molecular weight ph 23.8 44 0.0015 28.1 2.7 32 140-176 53-84 (161)
191 2kng_A Protein LSR2; DNA-bindi 23.4 90 0.0031 21.4 3.6 32 142-179 15-46 (55)
192 2wmy_A WZB, putative acid phos 21.1 39 0.0013 28.0 1.8 31 140-174 50-80 (150)
193 2l17_A Synarsc, arsenate reduc 20.9 32 0.0011 27.9 1.2 31 140-174 44-74 (134)
194 4etn_A LMPTP, low molecular we 20.7 59 0.002 28.1 2.9 32 140-176 80-111 (184)
195 1jl3_A Arsenate reductase; alp 20.4 41 0.0014 27.4 1.8 31 140-174 43-73 (139)
196 3a7l_A H-protein, glycine clea 20.2 56 0.0019 26.5 2.5 32 43-74 32-64 (128)
197 1p8a_A Protein tyrosine phosph 20.0 42 0.0015 27.6 1.8 31 140-174 48-78 (146)
No 1
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=100.00 E-value=6.2e-91 Score=705.51 Aligned_cols=401 Identities=27% Similarity=0.404 Sum_probs=39.6
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccChhhHHHH
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESEDEIAEA 80 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~~~~~~~ 80 (418)
||+||++|+||+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+.|.+|++|+.|.+++++....
T Consensus 7 mP~lg~~~~eg~i~~w~v~~Gd~V~~gd~l~~vEt~K~~~~i~ap~~G~v~~i~v~~G~~V~~G~~l~~i~~~~~~~~~~ 86 (428)
T 3dva_I 7 LPDIGEGIHEGEIVKWFVKPGDEVNEDDVLCEVQNDKAVVEIPSPVKGKVLEILVPEGTVATVGQTLITLDAPGYENMTF 86 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCccEEEEEEEcCCCCEECCCCEEEEEEeCCeeEEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecCCcccccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999998765443211
Q ss_pred HhhhhcCCCCCCCCCCCCcccccccCCCCCCCCcccccCccccccCCccCCCCCCCCccccChhHHHHHHHcCCCccccc
Q 014822 81 QAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARVV 160 (418)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~ar~la~e~gidl~~v~ 160 (418)
.... ... ++....+..+ .. ..+.+.+.+..... ..+. ....++++||+||+||+|+||||++|+
T Consensus 87 ~~~~-~~~---~~~~~~~~~~-~~-~~~~~~~~~~~~~~---------~~~~-~~~~~~~asP~~R~lA~e~gvdl~~v~ 150 (428)
T 3dva_I 87 KGQE-QEE---AKKEEKTETV-SK-EEKVDAVAPNAPAA---------EAEA-GPNRRVIAMPSVRKYAREKGVDIRLVQ 150 (428)
T ss_dssp ---------------------------------------------------------CCCCCHHHHHHHHHTTCCGGGSC
T ss_pred cccc-ccc---cccCCCcccC-Cc-cccccCCCcccccc---------cccc-ccccccccCHHHHHHHHHcCCCHHHCC
Confidence 1000 000 0000000000 00 00000000000000 0000 112367899999999999999999999
Q ss_pred cCCCCCccchhhHHHHHHhcCCC---ccc--cc-CCCC-----CCCCceeccCCchhHHHHHHhhhc-CCcceEEEEEEE
Q 014822 161 GSGPKGRIVAKDVEAEAAAAGPA---ASV--AA-AGPA-----GIELASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTI 228 (418)
Q Consensus 161 gtG~~Gri~~~DV~~~~~~~~~~---~~~--~~-~~~~-----~~~~~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~v 228 (418)
|||++|||+++||++|+...... +.+ .. .+.. .....+.+|+++|||.|+++|.+| +++||||++.+|
T Consensus 151 gtG~~GrI~k~DV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~Rk~ia~~m~~S~~~~P~~~~~~ev 230 (428)
T 3dva_I 151 GTGKNGRVLKEDIDAFLAGGAKPAPAAAEEKAAPAAAKPATTEGEFPETREKMSGIRRAIAKAMVHSKHTAPHVTLMDEA 230 (428)
T ss_dssp CCSTTSCCCTTTTTTTSCC-------------------------------------------------------------
T ss_pred CCCCCCceeHHHHHHHhhccccccccccccccccCCCCccccccCCccccccCcHHHHHHHHHHHHhcccCCeEEEEEEE
Confidence 99999999999999997532111 000 00 0000 011256899999999999999999 799999999999
Q ss_pred EchHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhhCCcCcccccCC-CeEEEcCceeEEEEEEeCCCeEEeEEeCC
Q 014822 229 TTDALDALYKKIKS------KGVTMTALLAKATALALVQHPVVNSSCRDG-NSFIYNSSINIAVAVAVDGGLITPVLQDA 301 (418)
Q Consensus 229 Dvt~l~~~~~~~k~------~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~-~~i~~~~~i~i~~av~~~~gl~~pvi~~~ 301 (418)
|+|+|+++|+++|+ .++||++||+||+++||++||+||++|+++ +++++|+++|+|+||++++||++|+|+++
T Consensus 231 Dvt~l~~~rk~~~~~~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a 310 (428)
T 3dva_I 231 DVTKLVAHRKKFKAIAAEKGIKLTFLPYVVKALVSALREYPVLNTSIDDETEEIIQKHYYNIGIAADTDRGLLVPVIKHA 310 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eHHHHHHHHHHhhhhHhhcCCCcCHHHHHHHHHHHHHHhCHHhhheEecCCCeEEEcCccCeEEEEEcCCceEEeeeccC
Confidence 99999999999874 269999999999999999999999999642 69999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeEecCCCCCceEEEeccceeEEEEccCCeEEEEe
Q 014822 302 DKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGTGAIMAVGASEPTVVATKDGRIGMKN 381 (418)
Q Consensus 302 ~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~ 381 (418)
++++|.+|+++++++.+++|+|+|.++|+++|||+|||+||+|+++|+||+|+||++||++|+++++|++. +|++++|+
T Consensus 311 ~~~sl~eia~~~~~l~~~ar~gkL~~~e~~ggtftISnlG~~G~~~ftpIin~pq~aIl~vG~i~~~pv~~-~g~i~~r~ 389 (428)
T 3dva_I 311 DRKPIFALAQEINELAEKARDGKLTPGEMKGASCTITNIGSAGGQWFTPVINHPEVAILGIGRIAEKPIVR-DGEIVAAP 389 (428)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccceEeecCCCCceEEEccccEEEEEEE-CCEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999995 89999999
Q ss_pred EEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 382 QMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 382 ~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
+|||||+||||+|||+|+++||+.|+++||+|+.|||
T Consensus 390 ~m~lsls~DHRviDG~~aa~Fl~~lk~~Le~P~~lll 426 (428)
T 3dva_I 390 MLALSLSFDHRMIDGATAQKALNHIKRLLSDPELLLM 426 (428)
T ss_dssp -------------------------------------
T ss_pred eEEEEEEecccccchHHHHHHHHHHHHHHhCHHHHhh
Confidence 9999999999999999999999999999999998875
No 2
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=100.00 E-value=1e-58 Score=437.12 Aligned_cols=216 Identities=28% Similarity=0.433 Sum_probs=209.3
Q ss_pred cCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhcC--CCCHHHHHHHHHHHHHhhCCcCcccccCC---Ce
Q 014822 201 PFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKSK--GVTMTALLAKATALALVQHPVVNSSCRDG---NS 274 (418)
Q Consensus 201 ~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~~--~~s~~~~~~~Av~~Al~~~P~ln~~~~~~---~~ 274 (418)
|++++||.|+++|.+| +++||||++.++|+|+|+++|+++|+. ++||++|++||+++||+++|+||++|+++ ++
T Consensus 18 pls~~rk~ia~~m~~S~~~iP~~~~~~evDvt~l~~~r~~~k~~~~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~ 97 (250)
T 3l60_A 18 PVHGVHARMAEKMTLSHKEIPTAKASVEVICAELLRLRDRFVSAAPEITPFALTLRLLVIALKHNVILNSTWVDSGEGPQ 97 (250)
T ss_dssp CCCHHHHHHHHHHHHHHHHCCEEEEEEEEECHHHHHHHHHHTTTCTTCCHHHHHHHHHHHHHHHCGGGSEEEECTTTSCE
T ss_pred CCcHHHHHHHHHHHHHhhcCCeEEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHHhhEEEeccCCCCe
Confidence 9999999999999999 699999999999999999999999875 78999999999999999999999999742 59
Q ss_pred EEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeEecCCC
Q 014822 275 FIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPP 354 (418)
Q Consensus 275 i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~pii~~ 354 (418)
+++|+++|+|+||++++||++|+|+++++++|.+|+++++++++++|+|+|.++|++||||+|||+||+|+++|+||+|+
T Consensus 98 i~~~~~vnigvAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~~ftpIinp 177 (250)
T 3l60_A 98 VHVHRGVHLGFGAATERGLLVPVVTDAQDKNTRELASRVAELITGAREGTLTPAELRGSTFTVSNFGALGVDDGVPVINH 177 (250)
T ss_dssp EEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCGGGGSCCSEEEECGGGGTCSSCCCCCCT
T ss_pred EEEcCceeEEEEEEcCCCeEEeEEecCCCCCHHHHHHHHHHHHHHHHcCCCChhhcCCCEEEEEcCCCCCcceeEeeeCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCccccc
Q 014822 355 GTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLT 417 (418)
Q Consensus 355 p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll 417 (418)
||++||++|+++++|++. +|++++|++|+|||+||||+|||+++++||+.|+++||+|+.|+
T Consensus 178 pq~aIL~vG~i~~~pv~~-~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~l~ 239 (250)
T 3l60_A 178 PEAAILGLGAIKPRPVVV-GGEVVARPTMTLTCVFDHRVVDGAQVAQFMCELRDLIESPETAL 239 (250)
T ss_dssp TCSEEEEECCCEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSHHHHT
T ss_pred CCceEEEecceEEEeEEE-CCEEEEEEEeEEEEEecccccCHHHHHHHHHHHHHHHhCHHHHh
Confidence 999999999999999996 89999999999999999999999999999999999999999775
No 3
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=100.00 E-value=4.8e-59 Score=436.56 Aligned_cols=220 Identities=28% Similarity=0.451 Sum_probs=211.6
Q ss_pred ceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhhCCcCccc
Q 014822 197 ASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKS-------KGVTMTALLAKATALALVQHPVVNSS 268 (418)
Q Consensus 197 ~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~-------~~~s~~~~~~~Av~~Al~~~P~ln~~ 268 (418)
.+.+|++++||.||++|.+| +++||||++.++|+|+|+++|+++|+ .++||+++++||+++||+++|+||++
T Consensus 4 ~~~~~~~~~r~~ia~~m~~S~~~~P~~~~~~evdvt~l~~~r~~~k~~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~ 83 (233)
T 1scz_A 4 EKRVPMTRLRKRVAERLLEAKNSTAMLTTFNEVNMKPIMDLRKQYGEAFEKRHGIRLGFMSFYVKAVVEALKRYPEVNAS 83 (233)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHTTSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCSHHHHHHHHHHHHHHCTTTTCE
T ss_pred ceeccCCHHHHHHHHHHHHhccCCCEEEEEEEEEcHHHHHHHHHHHhhhhhhcCCcccHHHHHHHHHHHHHHhChHhhEE
Confidence 45689999999999999999 78999999999999999999998875 48999999999999999999999999
Q ss_pred ccCCCeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCe
Q 014822 269 CRDGNSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRF 348 (418)
Q Consensus 269 ~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~ 348 (418)
|+ ++++++|+++|+|+||++++||++|+|++++.++|.+|+++++++++++|+|+|.++|++||||+|||+||+|..+|
T Consensus 84 ~~-~~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~G~~~~ 162 (233)
T 1scz_A 84 ID-GDDVVYHNYFDVSMAVSTPRGLVTPVLRDVDTLGMADIEKKIKELAVKGRDGKLTVEDLTGGNFTITNGGVFGSLMS 162 (233)
T ss_dssp EE-TTEEECCSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHTTTTCCCHHHHSCCSEEEEEGGGGTCCCC
T ss_pred Ee-CCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEeCCCCCccce
Confidence 96 57999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 349 DAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 349 ~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
+||+||||++||++|+++++|+++ ||++++|++|||||+||||+|||+|+|+||+.|+++||+|+.||+
T Consensus 163 tpIin~pq~aIl~vG~~~~~pv~~-~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 231 (233)
T 1scz_A 163 TPIINPPQSAILGMHAIKDRPMAV-NGQVEILPMMYLALSYDHRLIDGRESVGFLVTIKELLEDPTRLLL 231 (233)
T ss_dssp CCCCCTTCSEEEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHCTTHHHH
T ss_pred EcccCCCCcEEEEccccEEEEEEE-CCEEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHHHhh
Confidence 999999999999999999999996 799999999999999999999999999999999999999998753
No 4
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=100.00 E-value=1.4e-58 Score=436.01 Aligned_cols=221 Identities=28% Similarity=0.370 Sum_probs=212.8
Q ss_pred ceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhhCCcCcccc
Q 014822 197 ASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKS------KGVTMTALLAKATALALVQHPVVNSSC 269 (418)
Q Consensus 197 ~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~------~~~s~~~~~~~Av~~Al~~~P~ln~~~ 269 (418)
.+.+|++++||.|+++|.+| +++||||++.++|+|+|+++|+++|+ .++||+++++||+++||+++|+||++|
T Consensus 15 ~~~~~~~~~rk~ia~~m~~S~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikA~~~Al~~~P~~Na~~ 94 (243)
T 1dpb_A 15 IEEVPMTRLMQIGATNLHRSWLNVPHVTQFESADITELEAFRVAQKAVAEKAGVKLTVLPLLLKACAYLLKELPDFNSSL 94 (243)
T ss_dssp CCCCCCCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHTHHHHHHTTCCCCSHHHHHHHHHHHHHHSGGGGEEE
T ss_pred ceEeeCcHHHHHHHHHHHHhCcCCCeEEEEEEEEhHHHHHHHHHHhhhhhhccCCCChHHHHHHHHHHHHHhChHhhEEE
Confidence 36789999999999999999 79999999999999999999998875 489999999999999999999999999
Q ss_pred cCC-CeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCe
Q 014822 270 RDG-NSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRF 348 (418)
Q Consensus 270 ~~~-~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~ 348 (418)
+++ +++++|+++|+|+||++++||++|+|+++++++|.+|+++++++++++|+|+|.++|++||||+|||+||+|+++|
T Consensus 95 ~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~~ 174 (243)
T 1dpb_A 95 APSGQALIRKKYVHIGFAVDTPDGLLVPVIRNVDQKSLLQLAAEAAELAEKARSKKLGADAMQGACFTISSLGHIGGTAF 174 (243)
T ss_dssp CTTSSCEEECSSCCEEECEEETTEEECCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCGGGGSCCSEEEEECTTTCCSCC
T ss_pred ecCCCeEEEeCceeEEEEEECCCcEEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCccce
Confidence 753 6999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 349 DAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 349 ~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
+||+||||++||++|+++++|+++ ||++++|.+|||||+||||+|||+|+++||+.|+++||+|+.||+
T Consensus 175 tpIin~pq~aIl~vG~~~~~pv~~-~g~i~~~~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 243 (243)
T 1dpb_A 175 TPIVNAPEVAILGVSKASMQPVWD-GKAFQPRLMLPLSLSYDCRVINGAAAARFTKRLGDLLADIRAILL 243 (243)
T ss_dssp CCCCCTTSSEEEEECCCEEEEEEC-SSSEEEEEEEEEEEEEETTTSCHHHHHHHHHHHHHHHHCGGGGGC
T ss_pred ECccCCCCCeEEEccccEEEEEEE-CCeEEEEEEEEEEEEECcccccHHHHHHHHHHHHHHHhCHHhhhC
Confidence 999999999999999999999996 799999999999999999999999999999999999999998875
No 5
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=100.00 E-value=9.8e-59 Score=440.79 Aligned_cols=223 Identities=26% Similarity=0.417 Sum_probs=213.2
Q ss_pred CceeccCCchhHHHHHHhhhcCCcceEEEEEEEEchHHHHHHHHHhc------CCCCHHHHHHHHHHHHHhhCCcCcccc
Q 014822 196 LASVVPFTTMQGAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKS------KGVTMTALLAKATALALVQHPVVNSSC 269 (418)
Q Consensus 196 ~~~~~~~s~~r~~ia~~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~------~~~s~~~~~~~Av~~Al~~~P~ln~~~ 269 (418)
..+.+|++++||.|+++|.+|+++||||++.++|+|+|+++|+++|+ .++||+++++||+++||+++|+||++|
T Consensus 30 ~~~~~p~~~~rk~ia~~m~~S~~~P~~~~~~evDvt~l~~~r~~~k~~~~~~g~kls~~~~~ikAva~Al~~~P~~Na~~ 109 (262)
T 2ii3_A 30 KDRTEPVKGFHKAMVKTMSAALKIPHFGYCDEVDLTELVKLREELKPIAFARGIKLSFMPFFLKAASLGLLQFPILNASV 109 (262)
T ss_dssp CCEEEECCGGGHHHHHHHHHGGGSCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHCGGGSEEE
T ss_pred CcceecCCHHHHHHHHHHHHhhhCCeEEEEEEEEhHHHHHHHHHHhhhhhhccCCccHHHHHHHHHHHHHHhChHhhEEE
Confidence 45788999999999999999988999999999999999999998875 489999999999999999999999999
Q ss_pred cCC-CeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCe
Q 014822 270 RDG-NSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRF 348 (418)
Q Consensus 270 ~~~-~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~ 348 (418)
+++ +++++|+++|+|+||++++||++|+|+++++++|.+|+++++++++++|+|+|.++|++||||+|||+||+|+++|
T Consensus 110 ~~~~~~i~~~~~v~igiAV~t~~GL~vPvi~~a~~~sl~ei~~~~~~l~~~ar~~kL~~~e~~ggTftISNlG~~G~~~~ 189 (262)
T 2ii3_A 110 DENCQNITYKASHNIGIAMDTEQGLIVPNVKNVQIRSIFEIATELNRLQKLGSAGQLSTNDLIGGTFTLSNIGSIGGTYA 189 (262)
T ss_dssp CTTSCEEEECSSCCEEECEEETTEEECCEETTGGGCCHHHHHHHHHHHHHHHHHTCCCHHHHSCCCEEEECGGGTCCSCE
T ss_pred eCCCCEEEEecccceEEEEEcCCCEEEEEecCCCCCCHHHHHHHHHHHHHHHHhCCCCcccCCCCEEEEEeCCCCCccce
Confidence 753 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 349 DAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 349 ~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
+||+||||++||++|+++++|+++.||++++|.+|+|||+||||+|||+|+++||+.|+++||+|+.||+
T Consensus 190 tPIinppq~aIL~vG~~~~~pv~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~Le~P~~ll~ 259 (262)
T 2ii3_A 190 KPVILPPEVAIGALGTIKALPRFNEKGEVCKAQIMNVSWSADHRIIDGATVSRFSNLWKSYLENPAFMLL 259 (262)
T ss_dssp ECCCCTTCCEEEEECCCEEEEEECTTSCEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHSTHHHHH
T ss_pred ECccCCCcceEEEcCccEEEEEEecCCcEEEEeeeEEEEEECcceecHHHHHHHHHHHHHHHhCHHHHHh
Confidence 9999999999999999999999965789999999999999999999999999999999999999997753
No 6
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=100.00 E-value=2.3e-58 Score=436.18 Aligned_cols=221 Identities=27% Similarity=0.385 Sum_probs=212.2
Q ss_pred CCceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhhCCcCc
Q 014822 195 ELASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKS-------KGVTMTALLAKATALALVQHPVVN 266 (418)
Q Consensus 195 ~~~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~-------~~~s~~~~~~~Av~~Al~~~P~ln 266 (418)
...+.+|++++||.||++|.+| +++||||++.++|+|+|+++|+++|+ .++||+++++||+++||+++|+||
T Consensus 16 ~~~~~~pl~~~rk~ia~~m~~S~~~iP~~t~~~evDvt~l~~~r~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~N 95 (256)
T 3mae_A 16 AGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEVDATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLN 95 (256)
T ss_dssp CSCEEEECCHHHHHHHHHHHHHHHHSCEEEEEEEEECHHHHHHHHHHHHHHHHHHSSCCCHHHHHHHHHHHHHHHCTTTS
T ss_pred CCceEEeCcHHHHHHHHHHHHHhccCCeEEEEEEEEHHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhCHHhh
Confidence 3468899999999999999999 79999999999999999999998874 379999999999999999999999
Q ss_pred ccccCCCeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCC
Q 014822 267 SSCRDGNSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVD 346 (418)
Q Consensus 267 ~~~~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~ 346 (418)
++|+ ++++++|+++|+|+||++++||++|+|+++++++|.+|+++++++++++|+|+|.++|++||||+|||+||+|++
T Consensus 96 a~~~-~~~i~~~~~vnigiAV~t~~GL~vPvi~~ad~~sl~ei~~~i~~l~~~Ar~gkL~~~e~~ggTftISNlG~~G~~ 174 (256)
T 3mae_A 96 STWA-GDKIIEHANINISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVNSTGSFGSV 174 (256)
T ss_dssp EEEE-TTEEEECSSCCEEECCCCTTSCCCCEETTGGGSCHHHHHHHHHHHHHHHHTTCCCHHHHSCCSEEEECGGGGTCS
T ss_pred hEEe-cCEEEEcCcEEEEeEEEcCCceEEEEEcCCCCCCHHHHHHHHHHHHHHHhcCCCCchhcCCCEEEEecCCCCCcc
Confidence 9996 569999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CeEecCCCCCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCccccc
Q 014822 347 RFDAILPPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLT 417 (418)
Q Consensus 347 ~~~pii~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll 417 (418)
+|+||+|+||++||++|+++++|++. +|++++|++|||||+||||+|||+++++||+.|+++||+|+.|.
T Consensus 175 ~ftpIInppq~aIL~vG~i~~~pv~~-~g~i~~r~~m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~P~~~~ 244 (256)
T 3mae_A 175 QSMGIINHPQAAILQVESIVKRPVII-DDMIAVRDMVNLCLSIDHRILDGLLAGKFLQAIKANVEKISKEN 244 (256)
T ss_dssp EEECCCCTTSSEEEEEEEEEEEEEEE-TTEEEEEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHTCCTTT
T ss_pred ceEcccCCCCceEEEecccEEEEEEE-CCEEEEeEEEEEEEEEccccccHHHHHHHHHHHHHHHhChHHHH
Confidence 99999999999999999999999996 78999999999999999999999999999999999999998763
No 7
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-58 Score=436.04 Aligned_cols=222 Identities=31% Similarity=0.542 Sum_probs=213.0
Q ss_pred CceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhc-----CCCCHHHHHHHHHHHHHhhCCcCcccc
Q 014822 196 LASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKS-----KGVTMTALLAKATALALVQHPVVNSSC 269 (418)
Q Consensus 196 ~~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~-----~~~s~~~~~~~Av~~Al~~~P~ln~~~ 269 (418)
..+++|++++||.|+++|.+| +++||||++.++|+|+|+++|+++|+ .++||+++++||+++||+++|+||++|
T Consensus 11 ~~~~~~~~~~rk~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~~~~~~kls~~~~~ikAv~~Al~~~P~~Na~~ 90 (239)
T 3b8k_A 11 VFTDIPISNIRRVIAQRLMQSKQTIPHYYLSIDVNMGEVLLVRKELNKILEGRSKISVNDFIIKASALACLKVPEANSSW 90 (239)
T ss_dssp SCCCSSSCCSHHHHHHHHHHHHHHCCCCCEEEEECCTTHHHHHHHTHHHHTTSSCCCHHHHHHHHHHHHHHHCCCSCTTS
T ss_pred CceeccCChHHHHHHHHHHHhccCCCeEEEEEEEEcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHHHHHhChHhhEEE
Confidence 457889999999999999999 89999999999999999999999876 489999999999999999999999999
Q ss_pred cCCCeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeE
Q 014822 270 RDGNSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFD 349 (418)
Q Consensus 270 ~~~~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~ 349 (418)
+ ++++++|+++|+|+||++++||++|+|++++.++|.+|+++++++++++|+|+|.++|+++|||+|||+||+|+++|+
T Consensus 91 ~-~~~i~~~~~v~igvAV~~~~GL~vPvi~~a~~~~l~~i~~~~~~l~~~ar~~kL~~~e~~ggtftISnlG~~g~~~ft 169 (239)
T 3b8k_A 91 M-DTVIRQNHVVDVSVAVSTPAGLITPIVFNAHIKGVETIANDVVSLATKAREGKLQPHEFQGGTFTISNLGMFGIKNFS 169 (239)
T ss_dssp C-CCSSSCSCCCCEEECEECSSCEECCEECCSSCCCHHHHHHHHHHHHHHHHTTCCCGGGGCCCSEEEEECCSSCCSSCC
T ss_pred E-CCEEEEeCceeEEEEEEcCCcEEEEEEcCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCCCCceeEE
Confidence 6 568999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCCceEEEeccceeEEEEc-cCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 350 AILPPGTGAIMAVGASEPTVVAT-KDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 350 pii~~p~~~il~iG~~~~~~v~~-~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
||+|+||++||++|+++++|+++ .||++++|.+|||||+||||+|||+|+++||+.|+++||+|+.||+
T Consensus 170 piin~pq~aIl~vG~~~~~pv~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~Fl~~lk~~le~p~~ll~ 239 (239)
T 3b8k_A 170 AIINPPQACILAIGASEDKLVPADNEKGFDVASMMSVTLSCDHRVVDGAVGAQWLAEFRKYLEKPITMLL 239 (239)
T ss_dssp CCCCTTSCCCCEECCCCCSCCCCCSSSSCCCCCCEEEEECCCCCSSCHHHHHHHHHHHHHHHHCTHHHHC
T ss_pred CcCCCCceEEEECcccEEEEEEEcCCCcEEEEEEEEEEEEEcceeechHHHHHHHHHHHHHHhCHHhhhC
Confidence 99999999999999999999984 4789999999999999999999999999999999999999998875
No 8
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=100.00 E-value=8.7e-57 Score=418.85 Aligned_cols=213 Identities=26% Similarity=0.404 Sum_probs=203.8
Q ss_pred ceeccCCchhHHHHHHhhhc-CCcceEEEEEEEEchHHHHHHHHHhcC--CCCHHHHHHHHHHHHHhhCCcCcccccCC-
Q 014822 197 ASVVPFTTMQGAVSRNMVES-LAVPTFRVGYTITTDALDALYKKIKSK--GVTMTALLAKATALALVQHPVVNSSCRDG- 272 (418)
Q Consensus 197 ~~~~~~s~~r~~ia~~m~~s-~~iP~~~~~~~vDvt~l~~~~~~~k~~--~~s~~~~~~~Av~~Al~~~P~ln~~~~~~- 272 (418)
.+.+|++++||.||++|.+| +++||||++.++|+|+|+++|+++|+. ++||+++++||+++||+++|+||++|+++
T Consensus 6 ~~~~p~~~~r~~ia~~m~~s~~~~P~~~~~~evDvt~l~~~r~~~k~~g~kls~~~~~ikA~~~Al~~~P~~N~~~~~~~ 85 (224)
T 3rqc_A 6 EEILEMHGLRRIIFDKMTKAKQIMPHFTVMEEVDVTSMVSILDSAKARNRKVTVTGFLARIVPSILKQYPYLNAIYDETR 85 (224)
T ss_dssp CBCCCCCHHHHHHHHHHHHHHHHSCEEEEEECCBTHHHHHHHHHHTTTTCCCCHHHHHHHHHHHHHHHSGGGSBBCCSST
T ss_pred ceEeeCcHHHHHHHHHHHHHhcCCCeEEEEEEEEHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHhCHHhheEEeCCC
Confidence 46889999999999999999 899999999999999999999999874 78999999999999999999999999643
Q ss_pred CeEEEcCceeEEEEEEeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeEecC
Q 014822 273 NSFIYNSSINIAVAVAVDGGLITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAIL 352 (418)
Q Consensus 273 ~~i~~~~~i~i~~av~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~pii 352 (418)
+++++|+++|+|+||++++||++|+|+++++++|.+|+++++++++++|+|+|.++|++||||+|||+||+|+++|+|++
T Consensus 86 ~~i~~~~~v~igiAV~~~~GL~vPvi~~a~~~sl~~i~~~~~~l~~~ar~~~L~~~e~~ggtftISnlG~~G~~~~tpii 165 (224)
T 3rqc_A 86 RVYILKKYYNIGIAVDTPDGLNVFVIKDADRKSMVEISAEISDKASRARENKLQLDEVQDSTFTITNVGTIGGIMSTPII 165 (224)
T ss_dssp TCCCEECSCCEEEEEECSSCEEEEEESCGGGSCHHHHHHHHHHHHHHHTTTCCCGGGSCCCSEEEEECTTTCCSEEECCC
T ss_pred CEEEEeCccceEeEEEcCCceEEeEECCCCCCCHHHHHHHHHHHHHHHHcCCCCccccCCCEEEEEcCCcCCccceEecc
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccccC
Q 014822 353 PPGTGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDLTF 418 (418)
Q Consensus 353 ~~p~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~ll~ 418 (418)
|+||++||++|++.++| . |.+|||||+||||+|||+|+++||+.|+++||+|+.||+
T Consensus 166 n~pq~aIl~vG~~~~~p-----~----r~~m~lsls~DHRviDGa~aa~Fl~~l~~~le~p~~ll~ 222 (224)
T 3rqc_A 166 NYPEVAILGVHRILERE-----G----RKYMYLSLSCDHRLIDGAVATRFIVDLKKVIEDPNAIIY 222 (224)
T ss_dssp CTTBSEEEEECCCEEET-----T----EEECCEEEEEETTTSCHHHHHHHHHHHHHHHTCTTTTTC
T ss_pred CCCCceEEEecccEEEC-----C----ceEEEEEEEeccceecHHHHHHHHHHHHHHHhCHHHHhh
Confidence 99999999999999873 3 789999999999999999999999999999999998875
No 9
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=100.00 E-value=1.2e-43 Score=329.25 Aligned_cols=188 Identities=14% Similarity=0.147 Sum_probs=170.2
Q ss_pred HhhhcCCcceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEEE-EeC
Q 014822 212 NMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAV-AVD 290 (418)
Q Consensus 212 ~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~av-~~~ 290 (418)
..-++.++|||+++.++|+|+|+++|++ .++||+++++||+++||+++|+||++|+ ++++++|+++|+|+|| +++
T Consensus 23 ~~f~~~~~P~~t~~~evDvt~l~~~rk~---~~ls~~~~~ikAv~~Al~~~P~~Na~~~-~~~i~~~~~v~igiAV~~t~ 98 (219)
T 1q23_A 23 EAFQSVAQCTYNQTVQLDITAFLKTVKK---NKHKFYPAFIHILARLMNAHPEFRMAMK-DGELVIWDSVHPCYTVFHEQ 98 (219)
T ss_dssp HHHTTTTCEEEEEEEEEECHHHHHHHHH---TTCCHHHHHHHHHHHHHTTCGGGSEEEE-TTEEEEESCCEEEEEEEETT
T ss_pred HHhcCCCCcEEEEEEEEEhHHHHHHHHH---cCCCHHHHHHHHHHHHHHhChHhhEEEE-CCEEEEecccCeEEEEEecC
Confidence 3346689999999999999999999865 3899999999999999999999999997 5799999999999999 999
Q ss_pred CCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhC-CCCC-CCCCCCeEEEeecCCCCCCCeEecCCCCC---ceEEEeccc
Q 014822 291 GGLITPVLQDADKADIYTLSRKWKELVDKARAK-LLQP-HEYNTGTFTLSNLGMFGVDRFDAILPPGT---GAIMAVGAS 365 (418)
Q Consensus 291 ~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~-~l~~-~~~~~~t~~iSnlg~~g~~~~~pii~~p~---~~il~iG~~ 365 (418)
+||++|++.. +.+++.+|+++++++++++|++ +|.+ +++ ||||+|||+||++++.+.+.++++. +|||++|++
T Consensus 99 ~GL~~pvi~~-~~~~l~~i~~~~~~l~~~ar~~~kL~~~~~~-ggtftISnlG~~~ft~i~~~~~~~~~~~~pIi~~G~~ 176 (219)
T 1q23_A 99 TETFSSLWSE-YHDDFRQFLHIYSQDVACYGENLAYFPKGFI-ENMFFVSANPWVSFTSFDLNVANMDNFFAPVFTMGKY 176 (219)
T ss_dssp TTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTCCC-SSEEEEEECTTCCCSEEEEEESCCTTCCSCEEEECCC
T ss_pred CcEEEEEEec-CCCCHHHHHHHHHHHHHHHHccCCCCCcccc-CCEEEEEcCccccccccccCCCCCccceeEEEecccE
Confidence 9999999885 6789999999999999999998 5975 788 9999999999998887776665543 599999999
Q ss_pred eeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcc
Q 014822 366 EPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPR 414 (418)
Q Consensus 366 ~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~ 414 (418)
+++ +| |.+|||||+||||+|||+|+|+||+.|+++||+|.
T Consensus 177 ~~~-----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~~~ 216 (219)
T 1q23_A 177 YTQ-----GD----KVLMPLAIQVHHAVCDGFHVGRMLNELQQYCDEWQ 216 (219)
T ss_dssp EEE-----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred EEE-----CC----cEEEEEEEEEEchhhChHHHHHHHHHHHHHHhCcc
Confidence 986 66 78999999999999999999999999999999863
No 10
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=100.00 E-value=3.7e-43 Score=324.73 Aligned_cols=192 Identities=13% Similarity=0.162 Sum_probs=170.7
Q ss_pred HHHHHHhhhcCCcceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEE
Q 014822 207 GAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVA 286 (418)
Q Consensus 207 ~~ia~~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~a 286 (418)
|+---..-.+.++|||+++.++|+|+|+++|++ .++||+++++||+++||+++|+||++|+ ++++++|+++|+|+|
T Consensus 13 R~~~f~~f~~~~~P~~~~~~evDvt~l~~~rk~---~~ls~~~~~ikAv~~Al~~~P~~Na~~~-~~~i~~~~~v~igiA 88 (213)
T 3cla_A 13 RREHFEFYRHRLPCGFSLTSKIDITTLKKSLDD---SAYKFYPVMIYLIAQAVNQFDELRMAIK-DDELIVWDSVDPQFT 88 (213)
T ss_dssp THHHHHHHHHTSCCEEEEEEEEECHHHHHHHHT---SSCCHHHHHHHHHHHHHTTCGGGSEEEE-TTEEEEESCCEEEEE
T ss_pred cHHHHHHHhCCCCceEEEEEEEEHHHHHHHHHH---hCCCHHHHHHHHHHHHHhhCHHhhEEEE-CCEEEEEeccceeEE
Confidence 333334445578999999999999999998754 4899999999999999999999999997 579999999999999
Q ss_pred E-EeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHhC-CCCC-CCCCCCeEEEeecCCCCCCCeEecCCCC---CceEE
Q 014822 287 V-AVDGGLITPVLQDADKADIYTLSRKWKELVDKARAK-LLQP-HEYNTGTFTLSNLGMFGVDRFDAILPPG---TGAIM 360 (418)
Q Consensus 287 v-~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~-~l~~-~~~~~~t~~iSnlg~~g~~~~~pii~~p---~~~il 360 (418)
| ++++||++|++.. +.+++.+|+++++++++++|++ +|.+ ++++||||+|||+||+++++|+.-.+++ ..|||
T Consensus 89 Vf~t~~GL~vpvi~~-~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~ggtftISnlg~~~ft~i~~~~~~g~~~~~PIi 167 (213)
T 3cla_A 89 VFHQETETFSALSCP-YSSDIDQFMVNYLSVMERYKSDTKLFPQGVTPENHLNISALPWVNFDSFNLNVANFTDYFAPII 167 (213)
T ss_dssp EEETTTTEEEEEECC-CCSSHHHHHHHHHHHHHHHTTCCSSSTTSSCCSSEEEEEEETTCCCSCCCCCCSCCTTCCSCEE
T ss_pred EEeCCCceEEEEEec-CCCCHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCEEEEEcCCCCCcccccccCCCCCcccccEE
Confidence 9 9999999999876 6789999999999999999996 8987 7899999999999999888876433333 24899
Q ss_pred EeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcC
Q 014822 361 AVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIED 412 (418)
Q Consensus 361 ~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 412 (418)
++|+++++ +| |.+|||||+||||+|||+|+|+||+.|+++||+
T Consensus 168 ~~G~~~~~-----~~----~~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le~ 210 (213)
T 3cla_A 168 TMAKYQQE-----GD----RLLLPLSVQVHHAVCDGFHVARFINRLQELCNS 210 (213)
T ss_dssp EEECCEEE-----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHHTS
T ss_pred EeeEEEEE-----CC----eEEEEEEEEEcccccChHHHHHHHHHHHHHHHh
Confidence 99999976 67 789999999999999999999999999999998
No 11
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.7e-44 Score=400.42 Aligned_cols=205 Identities=24% Similarity=0.344 Sum_probs=171.0
Q ss_pred HhhhcCCcceEEEEEEEEchHHHHHHHHHhc-------CCCCHHHHHHHHHHHHHhhCCcCcccccCCC---eEEEcCce
Q 014822 212 NMVESLAVPTFRVGYTITTDALDALYKKIKS-------KGVTMTALLAKATALALVQHPVVNSSCRDGN---SFIYNSSI 281 (418)
Q Consensus 212 ~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~-------~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~---~i~~~~~i 281 (418)
+|.+|.++||||++.+||+|+|+++|+++|+ .++||++|++||+++||+++|+||++|++++ .+++|++|
T Consensus 1 ~m~~S~~~P~~t~~~evDvt~l~~~R~~~k~~~~~~~g~kls~~~~iikAva~AL~~~P~~Na~~~~~~~~~~i~~~~~v 80 (1113)
T 2xt6_A 1 GMNASLEVPTATSVRAIPAKLMIDNRVVINNHLKRTRGGKISFTHLLGYAIVQAVKKFPNMNRHFAVVDGKPTAITPAHT 80 (1113)
T ss_dssp ------CCCEEEEEEEEECHHHHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHCGGGGCEEEESSSSEEEECCSSC
T ss_pred ChhhhccCCeEEEEEEEehHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHHHHHHhChHhhEEEeccCCCceEEEeCcc
Confidence 5788889999999999999999999998875 3899999999999999999999999997432 79999999
Q ss_pred eEEEEEEeC--CC---eEEeEEeCCCCCCHHHHHHHHHHHHHHHHhCCCCCCCCCCCeEEEeecCCCCCCCeEecCCCCC
Q 014822 282 NIAVAVAVD--GG---LITPVLQDADKADIYTLSRKWKELVDKARAKLLQPHEYNTGTFTLSNLGMFGVDRFDAILPPGT 356 (418)
Q Consensus 282 ~i~~av~~~--~g---l~~pvi~~~~~~~l~~i~~~~~~~~~~a~~~~l~~~~~~~~t~~iSnlg~~g~~~~~pii~~p~ 356 (418)
|||+||+++ +| |++|||++++.++|.+|+++++++++++|+|+|+++|++||||||||+||+|..+|+|||||||
T Consensus 81 nigiAV~t~~~~G~~gL~vPvI~~a~~~sl~ei~~~i~~l~~rAr~gkL~~~d~~ggTftISNlG~~G~~~~tPIinppq 160 (1113)
T 2xt6_A 81 NLGLAIDLQGKDGNRSLVVAAIKRCETMRFGQFIAAYEDIVRRARDGKLTAEDFSGVTISLTNPGTLGTVHSVPRLMQGQ 160 (1113)
T ss_dssp CEEEEC-----------CEEEECCGGGCCHHHHHHHHHHHHHHHTTTCCCGGGTSCCSEEEECC------------CTTC
T ss_pred cEEEEEeccCCCCceeEEeeeecCCCCCCHHHHHHHHHHHHHHHhcCCCCccccCCCEEEEeCCCcCCCcceECCCCCCC
Confidence 999999997 66 9999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEEeccceeEEEEccC-----CeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhcCcccc
Q 014822 357 GAIMAVGASEPTVVATKD-----GRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIEDPRDL 416 (418)
Q Consensus 357 ~~il~iG~~~~~~v~~~~-----g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p~~l 416 (418)
++||++|++.++|++..+ |++++|++|+|||+||||+|||+++++||+.|+++||+|+.|
T Consensus 161 ~aIL~vG~i~~~pv~~~~~~~~~g~i~~r~~m~lsls~DHRviDGa~aa~FL~~lk~~Le~p~~w 225 (1113)
T 2xt6_A 161 GAIIGAGAMEYPAEFQGASEERIADLGIGKLITLTSTYDHRIIQGAESGDFLRTIHQLLLDDDFF 225 (1113)
T ss_dssp SEEEEECCCBCCTTSTTCCHHHHHHHTCCCEEEEEEEEETTTCCHHHHHHHHHHHHHHTTCHHHH
T ss_pred ceEEEcCccEEEeEEcCCCcccCCceeEeeeeEEEEEECcceechHHHHHHHHHHHHHHhCcHHH
Confidence 999999999999888521 678999999999999999999999999999999999999754
No 12
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=4.6e-42 Score=317.68 Aligned_cols=196 Identities=12% Similarity=0.130 Sum_probs=171.4
Q ss_pred CCchhHHHHHHhhhcCCcceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCce
Q 014822 202 FTTMQGAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSI 281 (418)
Q Consensus 202 ~s~~r~~ia~~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i 281 (418)
+..--|+---..-.+.++|||+++.++|+|+|+++|++. ++||+++++||+++||+++|+||++|++++++++|+++
T Consensus 10 ~~~W~R~~~f~~f~~~~~P~~~~~~evDvt~l~~~rk~~---~ls~~~~~ikAv~~Al~~~P~~n~~~~~~~~i~~~~~i 86 (217)
T 2i9d_A 10 IENWERKENFNFFRHFQNPQLSITSEVECGGARQRAKAA---GQSFFLHYLYAVLRAANEIPEFRYRIDPDGRVVLYDTI 86 (217)
T ss_dssp SSSSTTHHHHHHHTTCSBCEEEEEEEEECHHHHHHHHHT---TCCHHHHHHHHHHHHHHHSGGGGEEECTTSCEEEESCC
T ss_pred hhhCCCHHHHHHHhCCCCceEEEEEEEEhHHHHHHHHHc---CCCHHHHHHHHHHHHHHhCHHhheEEcCCCEEEEeccc
Confidence 333334444444556899999999999999999988653 89999999999999999999999999635799999999
Q ss_pred eEEEEE-EeCCCeEEeEEeCCCCCCHHHHHHHHHHHHHHHHh-CCCCCC------CCCCCeEEEeecCCCCCCCeEecCC
Q 014822 282 NIAVAV-AVDGGLITPVLQDADKADIYTLSRKWKELVDKARA-KLLQPH------EYNTGTFTLSNLGMFGVDRFDAILP 353 (418)
Q Consensus 282 ~i~~av-~~~~gl~~pvi~~~~~~~l~~i~~~~~~~~~~a~~-~~l~~~------~~~~~t~~iSnlg~~g~~~~~pii~ 353 (418)
|+|+|| ++++||++|++. ++.+++.+|+++++++++++|+ ++|.++ |++||||+|||+||+++++|+...+
T Consensus 87 ~igvAVf~t~~GL~~pv~~-~~~~~~~~i~~~~~~l~~~ar~~~kL~~~~~~~~~e~~ggtftISnlg~~~ft~i~~~~~ 165 (217)
T 2i9d_A 87 DMLSPIKIKENGKFFTTRF-PYHNDFDTFYQEARLIIDAIPEDGDPYAAENEEVADGDYGLILLSATPDLYFTSITGTQE 165 (217)
T ss_dssp EEEEEEECSTTSCEEEEEE-CCCSSHHHHHHHHHHHHHHCCSSCCTTHHHHHHHHHTCCCEEEEEECTTCCCSEECCCBC
T ss_pred CeEEEEEecCCceEeEEEe-cCCCCHHHHHHHHHHHHHHHHhcCCCCCccccccccCCCCEEEEEcCCccccceeecCCC
Confidence 999999 999999999985 6778999999999999999998 599885 8999999999999998888864444
Q ss_pred CC---CceEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHh
Q 014822 354 PG---TGAIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKII 410 (418)
Q Consensus 354 ~p---~~~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~l 410 (418)
++ ..|||++|+++++ +| |.+|||||+||||+|||+|+|+||+.|+++|
T Consensus 166 ~g~~~~~PIi~~Gk~~~~-----~~----r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 166 KRSGNNYPLLNAGKAIIR-----EG----RLVMPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp STTCCSSCEEEECCCEEE-----TT----EEEEEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred CCccceEEEEecceEEEE-----CC----cEEEEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 33 2589999999976 66 7899999999999999999999999999987
No 13
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=99.96 E-value=1.9e-30 Score=241.12 Aligned_cols=161 Identities=30% Similarity=0.530 Sum_probs=38.6
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCc-cccCceeEEeccChhhHHH
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGV-ASVGSAIALLAESEDEIAE 79 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~-v~~g~~l~~i~~~~~~~~~ 79 (418)
||+||++|++|+|++|+|++||.|++||+||+|||||++++|+||++|+|.++++++|+. |.+|++|+.|..++++...
T Consensus 8 mP~lGesm~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~~~ei~Ap~~G~v~~i~v~~G~~~V~~G~~l~~i~~~~~~~~~ 87 (229)
T 1zy8_K 8 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEGEDWKH 87 (229)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCCCCCcEEEEEEecCCCCEeCCCCEEEEEecCCceeEEecCCCeEEEEEEecCCCeeecCCCEEEEEeccCccccc
Confidence 899999999999999999999999999999999999999999999999999999999997 9999999999754432111
Q ss_pred HHhhhhcCCCCCCCCCCCCcccccccCCCCCCCCcccccCccccccCCccCCCCCCCCccccChhHHHHHHHcCCCcccc
Q 014822 80 AQAKAAASGSPSSPASETSNSAAVVAAVPHPQPEKVKLAEPAAVTVGSAVHPASEGGKRIVASPYAKKLANELKVELARV 159 (418)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asP~ar~la~e~gidl~~v 159 (418)
........ .+.. .+ ... .+.+.+... ...+. .........++++||+|||||+|+||||++|
T Consensus 88 ~~~~~~~~----~~~~-~~--~~~---~~~~~~~~~-~~~~~-------~~~~~~~~~~~~asP~vRklAre~gVDL~~V 149 (229)
T 1zy8_K 88 VEIPKDVG----PPPP-VS--KPS---EPRPSPEPQ-ISIPV-------KKEHIPGTLRFRLSPAARNILEKHSLDASQG 149 (229)
T ss_dssp ------------------------------------------------------------CBCHHHHHHHHHTTCCSSSS
T ss_pred cccccccc----cccc-cc--cCC---Ccccccccc-cCCCc-------ccccccccccccCChHHHHHHHHcCCCcccc
Confidence 00000000 0000 00 000 000000000 00000 0000011125789999999999999999999
Q ss_pred ccCCCCCccchhhHHHHHHh
Q 014822 160 VGSGPKGRIVAKDVEAEAAA 179 (418)
Q Consensus 160 ~gtG~~Gri~~~DV~~~~~~ 179 (418)
.|||++|||+|+||++|++.
T Consensus 150 ~GTGp~GRItk~DV~~~~~~ 169 (229)
T 1zy8_K 150 TATGPRGIFTKEDALKLVQL 169 (229)
T ss_dssp CCCSTTSCBCHHHHHHHHHH
T ss_pred CCCCCCCceehHHHHHHHhh
Confidence 99999999999999999864
No 14
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=99.77 E-value=1.4e-18 Score=142.85 Aligned_cols=80 Identities=36% Similarity=0.667 Sum_probs=75.1
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC-ccccCceeEEeccChhhHHH
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG-VASVGSAIALLAESEDEIAE 79 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~-~v~~g~~l~~i~~~~~~~~~ 79 (418)
||+||++|.+|+|++|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+ .|..|++|+.|...+++...
T Consensus 12 ~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K~~~~i~Ap~~G~V~~i~v~~G~~~V~~G~~l~~i~~~~~~~~~ 91 (108)
T 2dne_A 12 LPSLSPTMQAGTIARWEKKEGDKINEGDLIAEVETDKATVGFESLEECYMAKILVAEGTRDVPIGAIICITVGKPEDIEA 91 (108)
T ss_dssp CCCCSSSCCEEEEEECSSCTTCEECTTSEEEEEECSSCEEEEECSSSEEEEECSSCTTCCSEETTCEEEEEESCHHHHHH
T ss_pred cCCCCCCcccEEEEEEEcCCCCEecCCCEEEEEEcCcceeEEeCCCCEEEEEEEeCCCCeeecCCCEEEEEecCccchhh
Confidence 79999999999999999999999999999999999999999999999999999999999 89999999999877655444
Q ss_pred H
Q 014822 80 A 80 (418)
Q Consensus 80 ~ 80 (418)
+
T Consensus 92 ~ 92 (108)
T 2dne_A 92 F 92 (108)
T ss_dssp H
T ss_pred h
Confidence 3
No 15
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=99.75 E-value=3.2e-18 Score=144.43 Aligned_cols=76 Identities=39% Similarity=0.721 Sum_probs=72.9
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC-ccccCceeEEeccChhh
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG-VASVGSAIALLAESEDE 76 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~-~v~~g~~l~~i~~~~~~ 76 (418)
||+||++|.+|+|++|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+ .|.+|++|+.|.+.+++
T Consensus 32 ~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K~~~~I~Ap~~G~V~~i~v~~Gd~~V~~G~~L~~i~~~~~~ 108 (128)
T 1y8o_B 32 LPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDKATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEAD 108 (128)
T ss_dssp CCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCSEETTCEEEEEESSGGG
T ss_pred cCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCcceeEEeCCCCeEEEEEEeCCCCeeecCCCEEEEEecCccc
Confidence 79999999999999999999999999999999999999999999999999999999998 89999999999876544
No 16
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=99.74 E-value=6.5e-18 Score=133.68 Aligned_cols=75 Identities=39% Similarity=0.701 Sum_probs=71.9
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC-ccccCceeEEeccChh
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG-VASVGSAIALLAESED 75 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~-~v~~g~~l~~i~~~~~ 75 (418)
||+||+++.+|+|.+|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+ .|..|++|+.|...++
T Consensus 10 ~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~~V~~G~~l~~i~~~~~ 85 (87)
T 3crk_C 10 LPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDXATIGFEVQEEGYLAKILVPEGTRDVPLGTPLCIIVEKEA 85 (87)
T ss_dssp CCCSSTTCCEEEEEEECSCTTCEECTTCEEEEEECSSCEEEEECCSCEEEEEESSCTTCCCEETTCEEEEEESSST
T ss_pred CCCCCCCCCcEEEEEEEcCCCCEEcCCCEEEEEECCcccceeecCcCcEEEEEEECCCCeEECCCCEEEEEEcccC
Confidence 79999999999999999999999999999999999999999999999999999999999 8999999999976543
No 17
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.72 E-value=9.2e-18 Score=135.68 Aligned_cols=74 Identities=43% Similarity=0.760 Sum_probs=71.6
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCcc-ccCceeEEeccCh
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVA-SVGSAIALLAESE 74 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v-~~g~~l~~i~~~~ 74 (418)
||+||++|.+|+|++|+|++||.|++||+||+||+||+.++|+||++|+|.++++++|+.+ ..|++|+.|...+
T Consensus 12 ~P~lg~~~~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K~~~~i~Ap~~G~v~~i~v~~G~~Vv~~G~~l~~i~~~~ 86 (98)
T 2dnc_A 12 MPSLSPTMEEGNIVKWLKKEGEAVSAGDALCEIETDKAVVTLDASDDGILAKIVVEEGSKNIRLGSLIGLIVEEG 86 (98)
T ss_dssp CCCCSTTCSEECEEEESSCTTCEECTTSEEEEEECSSCEEEEECSSCEEEEECSSCTTCCCEESSCEEEEEECTT
T ss_pred CCCCCCCCccEEEEEEEcCCCCEeCCCCEEEEEEcccceeEEeCCCCEEEEEEEeCCCCEEcCCCCEEEEEecCC
Confidence 8999999999999999999999999999999999999999999999999999999999998 9999999997654
No 18
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=99.71 E-value=1.6e-17 Score=132.96 Aligned_cols=73 Identities=25% Similarity=0.464 Sum_probs=71.0
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
||+||+++.+|+|++|+|++||.|++||+|++||+||+.++|+||++|+|.++++++|+.+..|++|+.|...
T Consensus 9 ~P~lg~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K~~~~i~Ap~~G~V~~i~v~~G~~V~~G~~l~~i~~~ 81 (93)
T 1k8m_A 9 LSDIGEGIREVTVKEWYVKEGDTVSQFDSICEVQSDKASVTITSRYDGVIKKLYYNLDDIAYVGKPLVDIETE 81 (93)
T ss_dssp CCSSCTTSCCEEEEEECCCTTCEECSSSCCEEEECSSCEEECCCSSCEEEEEECCCSSCEECTTSEEEEEECS
T ss_pred cCCCCCCCCCEEEEEEEcCCcCEECCCCEEEEEEcCCcEEEEEcCCCEEEEEEEcCCCCEeCCCCEEEEEecC
Confidence 7999999999999999999999999999999999999999999999999999999999999999999999753
No 19
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=99.68 E-value=5.2e-17 Score=126.00 Aligned_cols=72 Identities=28% Similarity=0.554 Sum_probs=70.4
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEecc
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 72 (418)
||+||+++.+|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.+..|++|+.|..
T Consensus 6 ~P~~g~~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (79)
T 1ghj_A 6 APTFPESIADGTVATWHKKPGEAVKRDELIVDIETDKVVMEVLAEADGVIAEIVKNEGDTVLSGELLGKLTE 77 (79)
T ss_dssp CCCCCSSCSCEEECCCSSCTTSEECSSCEEEEEECSSCEEEEECSSCEEEEEESSCTTCEECTTCEEEEECC
T ss_pred CCCCCCCCCCEEEEEEEcCCCCEECCCCEEEEEEccceeEEEEcCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 799999999999999999999999999999999999999999999999999999999999999999999964
No 20
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=99.63 E-value=4.1e-16 Score=120.29 Aligned_cols=71 Identities=34% Similarity=0.573 Sum_probs=69.5
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEec
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 71 (418)
||++|+++.+|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.+..|++|+.|.
T Consensus 6 ~P~~g~~~~~G~v~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~ 76 (77)
T 2l5t_A 6 LPDIGEGVTEGEIVRWDVKEGDMVEKDQDLVEVMTDKVTVKIPSPVRGKIVKILYREGQVVPVGSTLLQID 76 (77)
T ss_dssp CCCCSSSCCCEEEEECSCCTTCEECSCCCCCEEESSSCEEECCCCCCEEEEEECCCTTCEECSCSEEEEEE
T ss_pred CCCCCCCCccEEEEEEEeCCCCEECCCCEEEEEEccceEEEEECCCCEEEEEEEeCCcCEECCCCEEEEEE
Confidence 79999999999999999999999999999999999999999999999999999999999999999999885
No 21
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.62 E-value=1.9e-17 Score=128.90 Aligned_cols=72 Identities=26% Similarity=0.543 Sum_probs=70.2
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEecc
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 72 (418)
||+||+++.+|+|.+|++++||.|++||+|++||+||+.++|+||++|+|.++++++|+.+..|++|+.+.+
T Consensus 7 ~P~~g~~~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~G~~l~~i~~ 78 (80)
T 1pmr_A 7 VPDLPESVADATVATWHKKPGDAVVRDEVLVEIETDKVVLEVPASADGILDAVLEDEGTTVTSRQILGRLRE 78 (80)
T ss_dssp CCCCCSCCSCEECCBCCCCTTCCBSSSCCBCBCCSSSCCCCCBCCSBCCCCBCTTCTTCEECSSSEEEBCCC
T ss_pred cCCCCCCCccEEEEEEECCCcCEECCCCEEEEEEccceEEEEECCCCEEEEEEEcCCcCEECCCCEEEEEec
Confidence 799999999999999999999999999999999999999999999999999999999999999999999864
No 22
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=99.61 E-value=7.7e-16 Score=119.58 Aligned_cols=71 Identities=27% Similarity=0.466 Sum_probs=68.7
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
||++|++ +|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 7 ~p~~g~~--~G~v~~~~v~~G~~V~~G~~l~~ie~~~~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 77 (80)
T 1qjo_A 7 VPDIGGD--EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 77 (80)
T ss_dssp CCCCSSS--CEEEEECCCCTTCEECBTSEEEEEESSSSCEEEEBSSCEEEEECCCCTTCEECTTCCCEEEESC
T ss_pred CCCCCCC--CEEEEEEEcCCCCEECCCCEEEEEEcCCceEEEeCCCCEEEEEEecCCCCEECCCCEEEEEEcc
Confidence 7999997 9999999999999999999999999999999999999999999999999999999999999764
No 23
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=99.58 E-value=3.5e-15 Score=115.58 Aligned_cols=70 Identities=26% Similarity=0.385 Sum_probs=67.2
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
||++|++ + +|.+|++++||.|++||+|+++|++|+..+|+||.+|+|.++++++|+.|..|++|+.|...
T Consensus 6 ~P~~g~~--~-~i~~~~v~~Gd~V~~G~~l~~le~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 6 VPDIGGD--G-EVIELLVKTGDLIEVEQGLVVLESAKASMEVPSPKAGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp CCCCSSE--E-EEEEECCCTTCBCCSSSEEEEEECSSCEEEEECSSSSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred CCCCCCC--C-EEEEEecCCCCEEcCCCEEEEEEccceEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 7999986 7 99999999999999999999999999999999999999999999999999999999999754
No 24
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=99.55 E-value=1.9e-15 Score=117.68 Aligned_cols=72 Identities=24% Similarity=0.395 Sum_probs=69.2
Q ss_pred CCCCCCCCceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 1 MPALSSTMTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 1 ~P~l~~~~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
||++| ++..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|.++++++|+.+..|++|+.|...
T Consensus 7 ~p~~g-~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~v~~g~~l~~i~~~ 78 (81)
T 1gjx_A 7 VPDIG-GHENVDIIAVEVNVGDTIAVDDTLITLETDKATMDVPAEVAGVVKEVKVKVGDKISEGGLIVVVEAE 78 (81)
T ss_dssp CCCCS-SCSSEEEEEECCCSSCBCCSSCCCEEEECSSCEEEECCCCSSBBCCCCCCSSCEECSSSCCCEECCS
T ss_pred cCCCC-CCCcEEEEEEEcCCCCEECCCCEEEEEEeCCcEEEEECCCCEEEEEEecCCCCEeCCCCEEEEEEec
Confidence 79999 6899999999999999999999999999999999999999999999999999999999999999753
No 25
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=99.41 E-value=5.9e-13 Score=100.85 Aligned_cols=65 Identities=23% Similarity=0.370 Sum_probs=62.2
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
..|+|.+|++++||.|++||+|++||++|...+|+||.+|+|.++++++|+.|..|++|+.|.+.
T Consensus 6 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 70 (72)
T 1z6h_A 6 MAGNLWKVHVKAGDQIEKGQEVAILESMKMEIPIVADRSGIVKEVKKKEGDFVNEGDVLLELSNS 70 (72)
T ss_dssp SSEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEESSCTTCEECTTCEEEEEGGG
T ss_pred ccEEEEEEEcCCcCEECCCCEEEEEECCccEEEEECCCCcEEEEEecCCCCEECCCCEEEEEeCC
Confidence 47999999999999999999999999999999999999999999999999999999999999653
No 26
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=99.39 E-value=2.5e-13 Score=106.39 Aligned_cols=66 Identities=23% Similarity=0.305 Sum_probs=62.2
Q ss_pred CceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 8 MTEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 8 ~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
-..|+|.+|++++||.|++||+|++||++|+.++|+||.+|+|.+++ .+|+.+..|++|+.|.+..
T Consensus 11 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~-~~G~~V~~G~~l~~i~~~~ 76 (84)
T 2kcc_A 11 PSAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVKYIK-RPGAVLEAGCVVARLELDD 76 (84)
T ss_dssp SSSCCEEEESSCTTEEECTTCEEEEEECSSCEEEEECSSSEEEEECS-CTTCCCCTTCCCEEEECSC
T ss_pred CCCEEEEEEECCCCCEECCCCEEEEEEecceeEEEECCCCEEEEEEc-CCCCEECCCCEEEEEeCCC
Confidence 35799999999999999999999999999999999999999999999 9999999999999997543
No 27
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=99.37 E-value=4.5e-14 Score=110.91 Aligned_cols=63 Identities=27% Similarity=0.440 Sum_probs=61.4
Q ss_pred EEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 11 GKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 11 g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|...
T Consensus 11 G~v~~~~v~~Gd~V~~G~~L~~ie~~k~~~~i~Ap~~G~V~~~~v~~G~~V~~G~~l~~i~~~ 73 (85)
T 2k7v_A 11 VEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFEVE 73 (85)
T ss_dssp CCCCSCCCSSSCCCCCSSSCCCCSCCCSEEEEECSSCBCCCEECSCTTCCBCTTSEEEEEECC
T ss_pred EEEEEEEcCCCCEEcCCCEEEEEEccccEEEEECCCCEEEEEEEeCCCCEECCCCEEEEEEcC
Confidence 899999999999999999999999999999999999999999999999999999999999764
No 28
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=2.1e-12 Score=104.55 Aligned_cols=64 Identities=22% Similarity=0.310 Sum_probs=61.3
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
..|+|.+|++++||.|++||+|+++|++|+..+|+||++|+|. +++++|+.+..|++|+.|...
T Consensus 24 ~~G~v~~~~v~~Gd~V~~Gq~L~~le~~k~~~~i~Ap~~G~V~-~~v~~G~~V~~G~~l~~i~~~ 87 (100)
T 2dn8_A 24 SAGKLTQYTVEDGGHVEAGSSYAEMEVMKMIMTLNVQERGRVK-YIKRPGAVLEAGCVVARLELD 87 (100)
T ss_dssp SCEEEEEESSCTTEEECTTCEEEEEEETTEEEEEECSSSEEEE-ECSCTTCEECSSCEEEEECCS
T ss_pred CCEEEEEEEcCCcCEECCCCEEEEEEecceEEEEEcCCCEEEE-EEeCCCCEECCCCEEEEEEcC
Confidence 5799999999999999999999999999999999999999999 999999999999999999653
No 29
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=99.30 E-value=8.3e-12 Score=94.86 Aligned_cols=63 Identities=25% Similarity=0.476 Sum_probs=60.6
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEec
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 71 (418)
..|+|.+|++++||.|++||+|++++++|+..+|+||.+|+|.++.+.+|+.+..|++|+.|+
T Consensus 12 ~~G~v~~~~v~~G~~V~~G~~l~~i~~~~~~~~i~ap~~G~v~~~~~~~G~~v~~g~~l~~i~ 74 (74)
T 2d5d_A 12 MPGKVLRVLVRVGDRVRVGQGLLVLEAMKMENEIPSPRDGVVKRILVKEGEAVDTGQPLIELG 74 (74)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEEEETTEEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred CCEEEEEEEcCCCCEeCCCCEEEEEecccceEEEeCCCCEEEEEEEcCCcCEECCCCEEEEEC
Confidence 579999999999999999999999999999999999999999999999999999999999873
No 30
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=99.29 E-value=8.4e-12 Score=95.74 Aligned_cols=63 Identities=24% Similarity=0.433 Sum_probs=60.7
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEec
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 71 (418)
..|+|.+|++++||.|++||+|++++++|+..+|+||.+|+|.++++.+|+.+..|++|+.|+
T Consensus 15 ~~G~v~~~~v~~G~~V~~G~~L~~l~~~~~~~~i~Ap~~G~v~~~~~~~G~~v~~G~~l~~i~ 77 (77)
T 1dcz_A 15 LAGTVSKILVKEGDTVKAGQTVLVLEAMKMETEINAPTDGKVEKVLVKERDAVQGGQGLIKIG 77 (77)
T ss_dssp SSCEEEEECCCTTCEECTTSEEEEEEETTEEEEEECSSSEEEEEECCCTTCBCCBTSEEEEEC
T ss_pred CCEEEEEEEcCCcCEEcCCCEEEEEEccceeEEEECCCCEEEEEEecCCcCEECCCCEEEEEC
Confidence 579999999999999999999999999999999999999999999999999999999999873
No 31
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=99.28 E-value=9.3e-13 Score=105.40 Aligned_cols=62 Identities=19% Similarity=0.326 Sum_probs=26.3
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEe
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALL 70 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i 70 (418)
..|+|.+|++++||.|++||+|++||++|+..+|+||++|+|.++.+.+|+.|..|++|+.|
T Consensus 32 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i 93 (94)
T 2jku_A 32 MPGVVVAVSVKPGDAVAEGQEICVIEAMKMQNSMTAGKTGTVKSVHCQAGDTVGEGDLLVEL 93 (94)
T ss_dssp SSCEEEEECCCTTCCCCTTCCCEEEEC-----------------------------------
T ss_pred CCEEEEEEECCCCCEEcCCCEEEEEecccccEEEECCCCEEEEEEcCCCcCEECCCCEEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999876
No 32
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=99.27 E-value=6.6e-12 Score=97.18 Aligned_cols=62 Identities=19% Similarity=0.309 Sum_probs=58.2
Q ss_pred eEEEEE-------EEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEec
Q 014822 10 EGKIVS-------WVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 10 ~g~i~~-------w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 71 (418)
.|+|.+ |++++||.|++||.|++||++|+..+|+||++|+|.++++++|+.|..|++|+.|.
T Consensus 12 ~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k~~~~i~Ap~~G~v~~~~v~~G~~V~~G~~L~~i~ 80 (80)
T 1bdo_A 12 VGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMKMMNQIEADKSGTVKAILVESGQPVEFDEPLVVIE 80 (80)
T ss_dssp SEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETTEEEEEECSSCEEEEEECSCTTCEECTTCEEEEEC
T ss_pred CeEEEEecccCcccccCCcCEECCCCEEEEEEeccEEEEEECCCCEEEEEEEcCCCCEECCCCEEEEEC
Confidence 467776 59999999999999999999999999999999999999999999999999999873
No 33
>2eq9_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 2.09A {Thermus thermophilus}
Probab=99.27 E-value=2.7e-12 Score=86.33 Aligned_cols=39 Identities=49% Similarity=0.707 Sum_probs=37.0
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAA 178 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~ 178 (418)
.+||+||+||+|+|||++.|.|||+.|||+++||++|+.
T Consensus 2 ~asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~~ 40 (41)
T 2eq9_C 2 LAVPAARKLARELGIPIEEVPGSGPLGRVRVEDVRAYAE 40 (41)
T ss_dssp CBCHHHHHHHHHTTCCGGGSCCCSTTCCBCHHHHHHHHC
T ss_pred CCChHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHhc
Confidence 579999999999999999999999999999999999863
No 34
>3rnm_E Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex,...; protein-protein interaction, redox protein; HET: FAD NHE; 2.40A {Homo sapiens} SCOP: a.9.1.0 PDB: 1zwv_A
Probab=99.25 E-value=3.2e-12 Score=92.03 Aligned_cols=42 Identities=36% Similarity=0.577 Sum_probs=39.3
Q ss_pred ccccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHHh
Q 014822 138 RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAA 179 (418)
Q Consensus 138 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~~ 179 (418)
++.+||+||+||+|+|||++.|+|||+.|||+++||++|++.
T Consensus 7 ~v~aSPaaRrlA~e~gIdl~~V~GTG~~GRItk~DV~~~~~~ 48 (58)
T 3rnm_E 7 KTLATPAVRNLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 48 (58)
T ss_dssp -CCCCHHHHHHHHHTTCCGGGCCCCSGGGCCCHHHHHHHHHH
T ss_pred CcCcCHHHHHHHHHcCCCHHHCCCCCCCCceeHHHHHHHHhh
Confidence 678999999999999999999999999999999999999864
No 35
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=99.24 E-value=1.1e-11 Score=100.18 Aligned_cols=66 Identities=26% Similarity=0.374 Sum_probs=63.0
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|+|.+|++++||.|++||+|++|+++|+..+|+||++|+|.++++.+|+.|..|++|+.|.+.+
T Consensus 21 ~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~~~~~i~AP~~G~V~~~~v~~G~~V~~G~~L~~i~~~~ 86 (99)
T 2ejm_A 21 MTGTIEKVFVKAGDKVKAGDSLMVMIAMKMEHTIKSPKDGTVKKVFYREGAQANRHTPLVEFEEEE 86 (99)
T ss_dssp SSEEEEEECCCTTEEECSSCEEEEEESSSSEEEEECSSCEEEEEESCCTTEEECTTCBCEEECCCC
T ss_pred CCEEEEEEECCCCCEECCCCEEEEEEccceeEEEECCCCeEEEEEEcCCCCEECCCCEEEEEECCC
Confidence 579999999999999999999999999999999999999999999999999999999999997643
No 36
>2eq8_C Pyruvate dehydrogenase complex, dihydrolipoamide acetyltransferase E2 component; protein-protein complex, oxidoreductase; HET: FAD; 1.94A {Thermus thermophilus}
Probab=99.23 E-value=6.6e-12 Score=83.96 Aligned_cols=37 Identities=46% Similarity=0.730 Sum_probs=35.8
Q ss_pred cChhHHHHHHHcCCCccccccCCCCCccchhhHHHHH
Q 014822 141 ASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEA 177 (418)
Q Consensus 141 asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~ 177 (418)
+||+||++|+|+|||++.|.|||+.|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq8_C 2 AAPSIRRLARELGVDLTRLRGTGLAGRITEEDVRRAA 38 (40)
T ss_dssp CCHHHHHHHHHHTCCGGGCCCCSTTSCCCHHHHHHHH
T ss_pred CChHHHHHHHHhCCChhhcCCCCCCCceeHHHHHHHh
Confidence 6899999999999999999999999999999999886
No 37
>2eq7_C 2-oxoglutarate dehydrogenase E2 component; protein-protein complex, oxidoreductase; HET: FAD NAD; 1.80A {Thermus thermophilus}
Probab=99.20 E-value=4.4e-12 Score=84.84 Aligned_cols=37 Identities=41% Similarity=0.514 Sum_probs=34.9
Q ss_pred cChhHHHHHHHcCCCccccccCCCCCccchhhHHHHH
Q 014822 141 ASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEA 177 (418)
Q Consensus 141 asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~ 177 (418)
+||+||+||+|+|||++.|.|||+.|||+++||++|+
T Consensus 2 asP~ar~la~e~gidl~~v~gtG~~gri~k~Dv~~~~ 38 (40)
T 2eq7_C 2 AMPAAERLMQEKGVSPAEVQGTGLGGRILKEDVMRHL 38 (40)
T ss_dssp CCHHHHHHHHHTTCCTTTSCCCSSSSCCCHHHHTTC-
T ss_pred CCcHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHh
Confidence 6899999999999999999999999999999999775
No 38
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=99.15 E-value=4.7e-11 Score=127.72 Aligned_cols=62 Identities=23% Similarity=0.281 Sum_probs=60.4
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEec
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 71 (418)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|+
T Consensus 620 ~G~v~~~~v~~Gd~V~~g~~l~~iEamKm~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~ 681 (681)
T 3n6r_A 620 PGLIVKVDVEVGQEVQEGQALCTIEAMKMENILRAEKKGVVAKINASAGNSLAVDDVIMEFE 681 (681)
T ss_dssp CEEEEEECCCTTCEECTTCEEEEEECSSCEEEEECSSSEEEEEECCCTTCEECTTCEEEEEC
T ss_pred cEEEEEEEeCCCCEEcCCCEEEEEEecCceeEEECCCCeEEEEEEeCCcCEeCCCCEEEEEC
Confidence 59999999999999999999999999999999999999999999999999999999999884
No 39
>1w85_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate; dehydrogenase, multienzyme complex, oxidoreductase; HET: TDP; 2.0A {Geobacillus stearothermophilus} SCOP: a.9.1.1 PDB: 1w88_I* 1w4g_A 1w4e_A 1w4f_A 2pdd_A 2pde_A 1ebd_C*
Probab=99.13 E-value=2.4e-11 Score=84.94 Aligned_cols=41 Identities=37% Similarity=0.625 Sum_probs=38.5
Q ss_pred ccccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHH
Q 014822 138 RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAA 178 (418)
Q Consensus 138 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~ 178 (418)
++.+||++|+||+|+|||++.|.|||+.|||+++||++|+.
T Consensus 6 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~k~Dv~~~~~ 46 (49)
T 1w85_I 6 RVIAMPSVRKYAREKGVDIRLVQGTGKNGRVLKEDIDAFLA 46 (49)
T ss_dssp CCCCCHHHHHHHHHTTCCTTTSCCCSGGGCCCHHHHHHHHC
T ss_pred cccCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHHh
Confidence 45789999999999999999999999999999999999974
No 40
>1w4i_A Pyruvate dehydrogenase E2; transferase, peripheral-subunit binding domain, ultrafast folding, homologues,; NMR {Pyrobaculum aerophilum} PDB: 1w4j_A 1w4k_A
Probab=99.12 E-value=4.7e-11 Score=87.46 Aligned_cols=43 Identities=40% Similarity=0.674 Sum_probs=40.0
Q ss_pred ccccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHHhc
Q 014822 138 RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAAA 180 (418)
Q Consensus 138 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~~~ 180 (418)
++.+||++|+||+++||||+.|.|||+.|||+++||++|+...
T Consensus 4 ~~~asPaaRklA~e~gidl~~V~gtG~~GrItk~DV~~~~~~~ 46 (62)
T 1w4i_A 4 EVAAMPAARRLAKELGIDLSKVKGTGPGGVITVEDVKRYAEET 46 (62)
T ss_dssp SSEECHHHHHHHHHHTCCGGGSCCCSTTSEECHHHHHHHHHHH
T ss_pred cccCChHHHHHHHHhCCChhhcCCCCCCCcccHHHHHHHHhcc
Confidence 4678999999999999999999999999999999999998743
No 41
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=99.08 E-value=1.2e-10 Score=131.13 Aligned_cols=61 Identities=26% Similarity=0.463 Sum_probs=59.8
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEe
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALL 70 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i 70 (418)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|
T Consensus 1175 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~v~ap~~G~v~~i~v~~G~~V~~G~~l~~i 1235 (1236)
T 3va7_A 1175 TGRFWKPVAAVGDHVEAGDGVIIIEAMKTEMVVGATKSGKVYKILHKNGDMVEAGDLVAVI 1235 (1236)
T ss_dssp CEEEEEESSCTTCEECSSCEEEEEEETTEEEEEECSSCEEEEEECCCTTCEECTTCEEEEE
T ss_pred cEEEEEEEcCCCCEECCCCEEEEEEecCcceeEecCCCeEEEEEEeCCcCEeCCCCEEEEe
Confidence 4999999999999999999999999999999999999999999999999999999999987
No 42
>1bal_A Dihydrolipoamide succinyltransferase; glycolysis; NMR {Escherichia coli} SCOP: a.9.1.1 PDB: 1bbl_A 1w4h_A 2wav_A 2wxc_A 2btg_A 2bth_A 2cyu_A
Probab=99.07 E-value=3.9e-11 Score=84.46 Aligned_cols=40 Identities=28% Similarity=0.458 Sum_probs=37.4
Q ss_pred ccccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHH
Q 014822 138 RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEA 177 (418)
Q Consensus 138 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~ 177 (418)
.+.+||++|+||+|+|||++.|.|||+.|||+++||++|+
T Consensus 9 ~~~asP~aR~lA~e~gidl~~V~gtG~~GrI~k~DV~~~~ 48 (51)
T 1bal_A 9 NDALSPAIRRLLAEHNLDASAIKGTGVGGRLTREDVEKHL 48 (51)
T ss_dssp SCCCCGGGTTHHHHTTCCTTSSCCCSTTSCCCHHHHTTTS
T ss_pred CCCCChHHHHHHHHcCCCccccCCCCCCCcccHHHHHHHh
Confidence 4678999999999999999999999999999999998774
No 43
>2f60_K Pyruvate dehydrogenase protein X component; protein-binding protein, E3BD, protein binding; 1.55A {Homo sapiens} PDB: 2f5z_K
Probab=99.07 E-value=5.5e-11 Score=87.49 Aligned_cols=42 Identities=19% Similarity=0.342 Sum_probs=39.5
Q ss_pred ccccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHHh
Q 014822 138 RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAA 179 (418)
Q Consensus 138 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~~ 179 (418)
++.+||+||+||+++|||++.|.|||+.|||+++||++|+..
T Consensus 9 ~~~asPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 50 (64)
T 2f60_K 9 RFRLSPAARNILEKHSLDASQGTATGPRGIFTKEDALKLVQL 50 (64)
T ss_dssp HHHBCHHHHHHHHHTTCCGGGSCCCSGGGCBCHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHcCCChhhcCCCCCCCcccHHHHHHHHhc
Confidence 567899999999999999999999999999999999999864
No 44
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=99.06 E-value=1.7e-10 Score=129.64 Aligned_cols=64 Identities=16% Similarity=0.387 Sum_probs=61.0
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|...
T Consensus 1085 ~G~v~~~~v~~Gd~V~~G~~l~~ieamK~~~~i~ap~~G~v~~i~v~~G~~V~~g~~l~~i~~~ 1148 (1150)
T 3hbl_A 1085 PGSVTEVKVSVGETVKANQPLLITEAMKMETTIQAPFDGVIKQVTVNNGDTIATGDLLIEIEKA 1148 (1150)
T ss_dssp SEEEEEECCCTTCEECTTCEEEEEESSSCEEEEECSSSEEEEEECCCTTCEECTTBEEEEEC--
T ss_pred eEEEEEEEeCCCCEECCCCEEEEEEeccceeEEecCCCeEEEEEEeCCCCEeCCCCEEEEEecC
Confidence 6999999999999999999999999999999999999999999999999999999999999643
No 45
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=99.06 E-value=1.6e-11 Score=131.27 Aligned_cols=64 Identities=23% Similarity=0.397 Sum_probs=0.0
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|.+|++|+.|+++
T Consensus 610 ~G~v~~~~v~~Gd~V~~g~~l~~iEamK~~~~i~ap~~G~v~~i~~~~G~~v~~g~~l~~i~~~ 673 (675)
T 3u9t_A 610 NGSIVRVLVEPGQTVEAGATLVVLEAMKMEHSIRAPHAGVVKALYCSEGELVEEGTPLVELDEN 673 (675)
T ss_dssp ----------------------------------------------------------------
T ss_pred CEEEEEEEeCCCCEEcCCCEEEEEEecceeEEEECCCCeEEEEEEeCCcCCcCCCCEEEEEecC
Confidence 6999999999999999999999999999999999999999999999999999999999999643
No 46
>2coo_A Lipoamide acyltransferase component of branched- chain alpha-keto acid dehydrogenase...; E3_binding domain; NMR {Homo sapiens}
Probab=99.05 E-value=2.4e-10 Score=85.57 Aligned_cols=42 Identities=36% Similarity=0.592 Sum_probs=39.6
Q ss_pred ccccChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHHh
Q 014822 138 RIVASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAA 179 (418)
Q Consensus 138 ~~~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~~ 179 (418)
++.+||+||+||+|+||||+.|.|||+.|||+++||++|+..
T Consensus 15 ~~~aSPaaRklA~e~gidl~~V~GTG~~GRItk~DV~~~~~~ 56 (70)
T 2coo_A 15 KTLATPAVRRLAMENNIKLSEVVGSGKDGRILKEDILNYLEK 56 (70)
T ss_dssp SCCSCHHHHHHHHHHTCCGGGSCCCSTTSCCCHHHHHHHHHH
T ss_pred ccccCcHHHHHHHHhCCCccccCCCCCCCceeHHHHHHHHhc
Confidence 567899999999999999999999999999999999999865
No 47
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=98.86 E-value=1.8e-09 Score=89.48 Aligned_cols=68 Identities=24% Similarity=0.451 Sum_probs=61.9
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEeccee-----------------------------eEEecCCCeEEEEEEecCCC
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKAD-----------------------------MDVETFYDGYLAKIMVDEGG 59 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~-----------------------------~~i~a~~~G~v~~~~~~~g~ 59 (418)
..|+|.+|+|++||.|++||+|+++++.++. ..|+||++|+|.++.+.+|+
T Consensus 8 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~a~~~~~r~~~L~~~~~~s~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~ 87 (116)
T 2k32_A 8 VSGVIVNKLFKAGDKVKKGQTLFIIEQDQASKDFNRSKALFSQSAISQKEYDSSLATLDHTEIKAPFDGTIGDALVNIGD 87 (116)
T ss_dssp SCEEEEEECSCTTSEECTTCEEEEEECTTTSHHHHHHHHHTGGGCCSTTTTTHHHHTTTEEEEECSSSEEECCCSCCTTC
T ss_pred CCEEEEEEECCCcCEECCCCEEEEECHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHhhcCCEEEcCCCEEEEEEECCCCC
Confidence 5799999999999999999999999988655 48999999999999999999
Q ss_pred ccccC-ceeEEeccChhh
Q 014822 60 VASVG-SAIALLAESEDE 76 (418)
Q Consensus 60 ~v~~g-~~l~~i~~~~~~ 76 (418)
.|..| ++|+.|.+...-
T Consensus 88 ~v~~g~~~l~~i~~~~~~ 105 (116)
T 2k32_A 88 YVSASTTELVRVTNLNPI 105 (116)
T ss_dssp EECTTTSCCEEEECSCTH
T ss_pred EEcCCCcEEEEEECCCeE
Confidence 99999 999999876543
No 48
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=98.83 E-value=4.6e-09 Score=89.07 Aligned_cols=64 Identities=27% Similarity=0.295 Sum_probs=56.5
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEE---EecCCCccc---cCc-eeEEeccCh
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKI---MVDEGGVAS---VGS-AIALLAESE 74 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~---~~~~g~~v~---~g~-~l~~i~~~~ 74 (418)
|.|+.+.+ ++||.|++||+||+||+||+..+|.||.+|+|.++ +++.|+.|. .|+ .|+.|...+
T Consensus 45 G~i~~V~lp~vGd~V~~Gd~l~~VEs~K~~~eI~aPvsG~V~eiN~~l~~~p~~Vn~dp~g~GwL~~i~~~~ 116 (136)
T 1zko_A 45 GDVVYVDLPEVGREVKKGEVVASIESVKAAADVYAPLSGKIVEVNEKLDTEPELINKDPEGEGWLFKMEISD 116 (136)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSCEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEESC
T ss_pred CCcEEEEecCCCCEEeCCCEEEEEEEccEeEEEecCCCeEEEEEehhhccCccCcccCCCCCeEEEEEEECC
Confidence 34666655 99999999999999999999999999999999999 888999997 888 999997543
No 49
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=98.81 E-value=1.1e-09 Score=116.87 Aligned_cols=61 Identities=21% Similarity=0.295 Sum_probs=59.8
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEe
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALL 70 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i 70 (418)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|..|++|+.|
T Consensus 657 ~G~V~~v~V~~Gd~V~~Gq~L~~iEamKme~~I~Ap~~G~V~~i~v~~G~~V~~G~~L~~i 717 (718)
T 3bg3_A 657 PGKVIDIKVVAGAKVAKGQPLCVLSAMKMETVVTSPMEGTVRKVHVTKDMTLEGDDLILEI 717 (718)
T ss_dssp CEEEEEECSCTTCCBCTTCCCEEEESSSCEEEECCCCCBCBCCCCCCSEEEECSSCEEECB
T ss_pred CeEEEEEEeCCCCeeCCCCEEEEEecccceeEEecCCCeEEEEEecCCCCEeCCCCEEEEe
Confidence 7999999999999999999999999999999999999999999999999999999999877
No 50
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=98.75 E-value=4.3e-09 Score=118.52 Aligned_cols=62 Identities=23% Similarity=0.366 Sum_probs=54.0
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEec
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~ 71 (418)
.|+|++|+|++||.|++||+|++||+||++++|+||.+|+|.++++++|+.|..|++|+.|.
T Consensus 1103 ~G~v~~~~v~~Gd~V~~G~~l~~iEamKme~~i~Ap~~G~V~~i~v~~G~~V~~g~~l~~i~ 1164 (1165)
T 2qf7_A 1103 PGVISRVFVSSGQAVNAGDVLVSIEAMKMETAIHAEKDGTIAEVLVKAGDQIDAKDLLAVYG 1164 (1165)
T ss_dssp CEEEEEECCSSCCCC---CEEEEEEC---CEEEECCSSCCCCEECCCSSCEECTTBEEEEC-
T ss_pred CeEEEEEEcCCcCEeCCCCEEEEEEcccceEEEEcCCCEEEEEEEeCCCCEECCCCEEEEec
Confidence 69999999999999999999999999999999999999999999999999999999999885
No 51
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=98.42 E-value=1.3e-07 Score=79.68 Aligned_cols=63 Identities=22% Similarity=0.235 Sum_probs=51.5
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC---cc---ccCc-eeEEeccC
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG---VA---SVGS-AIALLAES 73 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~---~v---~~g~-~l~~i~~~ 73 (418)
|.|+.+.+ ++||.|++||+||+||+||+..+|.||.+|+|.+++...++ .+ +-|+ -|+.|...
T Consensus 36 G~i~~v~lp~~G~~V~~g~~l~~vEs~K~~~~I~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~~ 106 (131)
T 1hpc_A 36 GEVVFVELPEPGVSVTKGKGFGAVESVKATSDVNSPISGEVIEVNTGLTGKPGLINSSPYEDGWMIKIKPT 106 (131)
T ss_dssp CSEEEEECCCTTCEECBTSEEEEEEESSCEEEEEBSSCEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEES
T ss_pred CCceEEEecCCCCEEeCCCEEEEEEecceeEEEecCCCeEEEEEhhhhhcChhhhccCCCCCceEEEEEEC
Confidence 45777766 99999999999999999999999999999999999865544 44 2455 77777643
No 52
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=98.41 E-value=3.7e-07 Score=76.65 Aligned_cols=63 Identities=27% Similarity=0.275 Sum_probs=51.8
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEec---CCCcc---ccCc-eeEEeccC
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVD---EGGVA---SVGS-AIALLAES 73 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~---~g~~v---~~g~-~l~~i~~~ 73 (418)
|.|+.+.+ ++||+|++||++|+||++|+..+|.||.+|+|.+++.. ..+.+ +-|+ -|+.|...
T Consensus 36 G~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evn~~l~~~P~lvn~dpy~~gWl~~i~~~ 106 (128)
T 1onl_A 36 GDVVYVELPEVGRVVEKGEAVAVVESVKTASDIYAPVAGEIVEVNLALEKTPELVNQDPYGEGWIFRLKPR 106 (128)
T ss_dssp CSEEEEECBCTTCEECTTCEEEEEEESSBEEEEECSSSEEEEEECTHHHHCTTHHHHCTTTTTCCEEEEES
T ss_pred CCceEEEecCCCCEEeCCCEEEEEEEcceeeEEecCCCeEEEEEhhhhccChhhhccCCCCCccEEEEEEC
Confidence 44666655 99999999999999999999999999999999999754 44555 5666 78888643
No 53
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=98.38 E-value=3.3e-07 Score=76.95 Aligned_cols=63 Identities=21% Similarity=0.188 Sum_probs=50.8
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC---ccc---cCc-eeEEeccC
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG---VAS---VGS-AIALLAES 73 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~---~v~---~g~-~l~~i~~~ 73 (418)
|.|+.+.+ ++||.|++||+||+||++|+..+|.||.+|+|.+++...++ .+. -|+ -|+.|...
T Consensus 37 G~i~~v~lp~vG~~V~~g~~l~~vEs~K~~~~i~aPvsG~V~evN~~l~~~P~lvn~dpy~~gWl~~i~~~ 107 (128)
T 3a7l_A 37 GDMVFVDLPEVGATVSAGDDCAVAESVKAASDIYAPVSGEIVAVNDALSDSPELVNSEPYAGGWIFKIKAS 107 (128)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGTCTTHHHHCTTTTTCCEEEEES
T ss_pred CceEEEEecCCCCEEeCCCEEEEEEecceeeEEecCCCeEEEEEhhhhccChHHhccCCCCCccEEEEEEC
Confidence 44666655 99999999999999999999999999999999999865544 343 455 77777643
No 54
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=97.98 E-value=7.5e-06 Score=82.39 Aligned_cols=65 Identities=17% Similarity=0.225 Sum_probs=58.2
Q ss_pred ceEEEEEEEc-CCCCeeecCCeEEEEEec------------------------------------------------cee
Q 014822 9 TEGKIVSWVR-SEGDKLCKGESVVVVESD------------------------------------------------KAD 39 (418)
Q Consensus 9 ~~g~i~~w~v-~~Gd~V~~g~~l~~vet~------------------------------------------------K~~ 39 (418)
..|.|.+++| ++||.|++||+|++|++. ...
T Consensus 128 ~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~l~~aq~~~~~a~~~~~~~~~~~~a~~~l~~~~~~~~~~~~l~~~~~~~~~ 207 (413)
T 3ne5_B 128 AAGFIDKVYPLTVGDKVQKGTPLLDLTIPDWVEAQSEYLLLRETGGTATQTEGILERLRLAGMPEADIRRLIATQKIQTR 207 (413)
T ss_dssp SCEEEEEECSCCTTCEECTTCEEEEEECCSSHHHHHHHHHHHHTTCCHHHHHHHHHHHHHTTCCHHHHHHHHHHTSCCCE
T ss_pred cCEEEEEEEeCCCCCEEcCCCEEEEEcCHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCCCHHHHHHHHHhcccccc
Confidence 4799999998 999999999999999942 125
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
..|+||++|+|.++.+.+|+.|..|++|+.|.+.
T Consensus 208 ~~I~AP~~G~V~~~~v~~G~~V~~G~~l~~I~~~ 241 (413)
T 3ne5_B 208 FTLKAPIDGVITAFDLRAGMNIAKDNVVAKIQGM 241 (413)
T ss_dssp EEEECSSSEEEEECCCCTTCEECTTSCSEEEEEE
T ss_pred EEEEcCCCeEEEEEEcCCCCEECCCCcEEEEeCC
Confidence 6899999999999999999999999999999754
No 55
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=97.95 E-value=2.8e-06 Score=80.54 Aligned_cols=65 Identities=25% Similarity=0.328 Sum_probs=57.5
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecc---------------------------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDK--------------------------------------------------- 37 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K--------------------------------------------------- 37 (418)
..|+|.+++|++||.|++||+|+++++..
T Consensus 29 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~a~l~~a~~~~~r~~~L~~~g~~s~~~~~~a~~~~~ 108 (277)
T 2f1m_A 29 VSGIILKRNFKEGSDIEAGVSLYQIDPATYQATYDSAKGDLAKAQAAANIAQLTVNRYQKLLGTQYISKQEYDQALADAQ 108 (277)
T ss_dssp SCEEEEEECSCTTCEECTTSCSEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCHHHHHHHHHHHH
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHHHHHHHHH
Confidence 57999999999999999999999998742
Q ss_pred --------------------eeeEEecCCCeEEEEEEecCCCccccC--ceeEEeccC
Q 014822 38 --------------------ADMDVETFYDGYLAKIMVDEGGVASVG--SAIALLAES 73 (418)
Q Consensus 38 --------------------~~~~i~a~~~G~v~~~~~~~g~~v~~g--~~l~~i~~~ 73 (418)
....|+||++|+|..+.+.+|+.|..| ++|+.|.+.
T Consensus 109 ~a~a~l~~a~a~l~~a~~~l~~~~I~AP~~G~V~~~~~~~G~~v~~g~~~~l~~i~~~ 166 (277)
T 2f1m_A 109 QANAAVTAAKAAVETARINLAYTKVTSPISGRIGKSNVTEGALVQNGQATALATVQQL 166 (277)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTEECCSSCEEECCCSSCBTCEECTTCSSCSEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEeEEcCCCCEEcCCCCceeEEEecC
Confidence 124799999999999999999999999 689999654
No 56
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=97.94 E-value=8.6e-06 Score=80.07 Aligned_cols=66 Identities=18% Similarity=0.303 Sum_probs=58.9
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecce--------------------------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKA-------------------------------------------------- 38 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~-------------------------------------------------- 38 (418)
..|+|.+++|++||.|++||+|+++++...
T Consensus 64 ~~G~V~~v~v~~G~~V~kGq~L~~ld~~~l~~a~~~l~~a~a~l~~a~~~~~r~~~L~~~~~~s~~~~~~a~~~~~~a~a 143 (359)
T 3lnn_A 64 LAGRIVSLNKQLGDEVKAGDVLFTIDSADLAQANSDAAKARAAMTMARRNLDRQRELDKSEIAAKRDFEQAQSDYDQAAS 143 (359)
T ss_dssp SCEEEEECCSCTTCEECTTCEEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCCCCTTHHHHHHHHHHHHH
T ss_pred CCEEEEEEEcCCCCEEcCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999987531
Q ss_pred --------------------------eeEEecCCCeEEEEEEecCCCcccc-CceeEEeccCh
Q 014822 39 --------------------------DMDVETFYDGYLAKIMVDEGGVASV-GSAIALLAESE 74 (418)
Q Consensus 39 --------------------------~~~i~a~~~G~v~~~~~~~g~~v~~-g~~l~~i~~~~ 74 (418)
...|+||++|+|.++.+.+|+.+.. |++|+.|.+..
T Consensus 144 ~l~~a~~~l~~~~~~~~~~~~~~~~~~~~i~AP~~G~V~~~~~~~G~~v~~~g~~l~~i~~~~ 206 (359)
T 3lnn_A 144 ESQRADARLAQLGAKGGGTLQAGGGHILAVRSPINGRVVDLNAATGAYWNDTTASLMTVADLS 206 (359)
T ss_dssp HHHHHHHHHHHHHHHHGGGBCSSTTSEEEEECSSCEEEEECCCCBTCEECCSSCCSEEEECCS
T ss_pred HHHHHHHHHHHhcCCcchhhhhcccceEEEECCCCEEEEEeecCCCceeCCCCcceEEEecCC
Confidence 3579999999999999999999998 99999997643
No 57
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=97.91 E-value=1e-05 Score=78.95 Aligned_cols=65 Identities=20% Similarity=0.274 Sum_probs=57.2
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecce--------------------------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKA-------------------------------------------------- 38 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~-------------------------------------------------- 38 (418)
..|+|.+++|++||.|++||+|+++++...
T Consensus 38 ~~G~V~~v~v~~G~~V~kG~~L~~ld~~~~~~~~~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 117 (341)
T 3fpp_A 38 VSGQLKTLSVAIGDKVKKDQLLGVIDPEQAENQIKEVEATLMELRAQRQQAEAELKLARVTYSRQQRLAQTQAVSQQDLD 117 (341)
T ss_dssp SCEEEEEECCCTTCEECTTCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSSSTTHHHH
T ss_pred CCcEEEEEEeCCCCEECCCCEEEEEChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccHHHHH
Confidence 579999999999999999999999987410
Q ss_pred -----------------------------------eeEEecCCCeEEEEEEecCCCccccCce---eEEeccC
Q 014822 39 -----------------------------------DMDVETFYDGYLAKIMVDEGGVASVGSA---IALLAES 73 (418)
Q Consensus 39 -----------------------------------~~~i~a~~~G~v~~~~~~~g~~v~~g~~---l~~i~~~ 73 (418)
...|+||++|+|.++.+.+|+.|..|++ |+.|.+.
T Consensus 118 ~a~~~~~~~~a~l~~~~a~l~~a~a~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~~ 190 (341)
T 3fpp_A 118 NAATEMAVKQAQIGTIDAQIKRNQASLDTAKTNLDYTRIVAPMAGEVTQITTLQGQTVIAAQQAPNILTLADM 190 (341)
T ss_dssp HHHHHHHHTHHHHHHHHHHHHHTHHHHTTTTTTTTSSEEECSSSEEEEEESSCTTCEECCTTSCCCCEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhCCEEECCCCeEEEEEecCCCCEEecCCCCceEEEEecC
Confidence 1459999999999999999999999987 8888654
No 58
>3klr_A Glycine cleavage system H protein; antiparallel beta sheet, beta sandwich, oxidoreductase; HET: GOL; 0.88A {Bos taurus} SCOP: b.84.1.0 PDB: 2edg_A
Probab=97.88 E-value=1.7e-05 Score=65.96 Aligned_cols=49 Identities=27% Similarity=0.230 Sum_probs=42.5
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG 59 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~ 59 (418)
|.|+.+.. ++|+.|++||.++.||++|+..+|.||.+|+|.++.....+
T Consensus 32 Gdiv~velp~vG~~v~~G~~~~~VES~K~~sdi~aPvsG~VvevN~~l~~ 81 (125)
T 3klr_A 32 GDVVYCSLPEVGTKLNKQEEFGALESVKAASELYSPLSGEVTEINKALAE 81 (125)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGTT
T ss_pred CCeEEEEeCCCCCEEcCCCEEEEEEEcceeeeeecCCCEEEEEEhhhhhh
Confidence 56777755 79999999999999999999999999999999988655433
No 59
>3mxu_A Glycine cleavage system H protein; seattle structural genomics center for infectious disease, S CAT-scratch disease, bacteremia; HET: CIT; 1.80A {Bartonella henselae}
Probab=97.75 E-value=3.4e-05 Score=65.40 Aligned_cols=49 Identities=37% Similarity=0.399 Sum_probs=41.9
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCC
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGG 59 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~ 59 (418)
|.|+-+.. ++|+.|++||.++.||++|+..+|.||.+|+|.++.-...+
T Consensus 54 GdIvfVelP~vG~~v~~Gd~~~~VES~Ka~sdi~sPvsG~VvevN~~L~d 103 (143)
T 3mxu_A 54 GDLVFIDLPQNGTKLSKGDAAAVVESVKAASDVYAPLDGEVVEINAALAE 103 (143)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEECGGGGT
T ss_pred CCeEEEEcCCCCCEeeCCCEEEEEEecceeeeeecCcceEEEEEhhhhhh
Confidence 55666644 89999999999999999999999999999999988655443
No 60
>3tzu_A GCVH, glycine cleavage system H protein 1; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.30A {Mycobacterium marinum}
Probab=97.71 E-value=3.5e-05 Score=64.96 Aligned_cols=44 Identities=27% Similarity=0.290 Sum_probs=39.1
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEE
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIM 54 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~ 54 (418)
|.|+-+.. ++|++|++||.++.||++|+..+|.||.+|+|.++.
T Consensus 49 Gdiv~VelP~vG~~v~~G~~~~~VES~K~~sdi~sPvsG~VvevN 93 (137)
T 3tzu_A 49 GDLVFVQLPEVGETVSAGESCGEVESTKTVSDLIAPASGQIVEVN 93 (137)
T ss_dssp CSEEEEECCCTTCEECTTSEEEEEEESSEEEEEECSEEEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEeh
Confidence 55666644 899999999999999999999999999999998864
No 61
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=97.66 E-value=1.6e-05 Score=78.76 Aligned_cols=65 Identities=20% Similarity=0.326 Sum_probs=57.2
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecce--------------------------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKA-------------------------------------------------- 38 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~-------------------------------------------------- 38 (418)
..|+|.+++|++||.|++||+|++|++...
T Consensus 50 v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~~~~~l~~a~a~l~~a~~~~~R~~~L~~~g~is~~~~~~a~~~~~~a~a~l~ 129 (369)
T 1vf7_A 50 VNGIILKRLFKEGSDVKAGQQLYQIDPATYEADYQSAQANLASTQEQAQRYKLLVADQAVSKQQYADANAAYLQSKAAVE 129 (369)
T ss_dssp SCEEEEECCSCSSEEECTTSEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEEEcCCCCEEcCCCEEEEECcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHHHHHHHHHH
Confidence 579999999999999999999999986421
Q ss_pred -------eeEEecCCCeEEEEEEecCCCccccC--ceeEEeccC
Q 014822 39 -------DMDVETFYDGYLAKIMVDEGGVASVG--SAIALLAES 73 (418)
Q Consensus 39 -------~~~i~a~~~G~v~~~~~~~g~~v~~g--~~l~~i~~~ 73 (418)
...|+||++|+|.++.+.+|+.|..| ++|+.|.+.
T Consensus 130 ~a~~~l~~~~I~AP~~G~V~~~~v~~G~~V~~g~g~~l~~i~~~ 173 (369)
T 1vf7_A 130 QARINLRYTKVLSPISGRIGRSAVTEGALVTNGQANAMATVQQL 173 (369)
T ss_dssp HHHHHHHTTEEECSSSEEECCCSSCBTCEECTTCSSCSEEEECC
T ss_pred HHHHhhcCCEEECCCCeEEEEEEcCCCCeEcCCCCceeEEEecC
Confidence 25799999999999999999999995 899998654
No 62
>3hgb_A Glycine cleavage system H protein; ssgcid, niaid, decode, UW, SBRI, lipoyl; 1.75A {Mycobacterium tuberculosis} PDB: 3ift_A
Probab=97.48 E-value=0.00014 Score=62.32 Aligned_cols=44 Identities=25% Similarity=0.256 Sum_probs=38.6
Q ss_pred EEEEEEEc-CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEE
Q 014822 11 GKIVSWVR-SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIM 54 (418)
Q Consensus 11 g~i~~w~v-~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~ 54 (418)
|.|+-+.. ++|+.|++||.++.||+.|+..+|.||.+|.|.++.
T Consensus 59 GdIvfVeLP~vG~~v~~Gd~~~~VESvKa~sdi~sPvsG~VvevN 103 (155)
T 3hgb_A 59 GDVVFVQLPVIGTAVTAGETFGEVESTKSVSDLYAPISGKVSEVN 103 (155)
T ss_dssp CSEEEEECCCTTCEECTTCEEEEEEESSCEEEEECSSSEEEEEEC
T ss_pred CCeEEEEcCCCCCEEeCCCEEEEEEecceeeeeecCcceEEEEEh
Confidence 45665533 899999999999999999999999999999998865
No 63
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=97.29 E-value=1.7e-05 Score=78.24 Aligned_cols=64 Identities=22% Similarity=0.318 Sum_probs=55.4
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecce--------------------------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDKA-------------------------------------------------- 38 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K~-------------------------------------------------- 38 (418)
..|+|.+++|++||.|++||+|+++++...
T Consensus 39 ~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~~~~~l~~~~a~l~~~~a~l~~a~~~~~~a~~~~~r~~~L~~~~~~s~~~~~ 118 (369)
T 4dk0_A 39 VSGKITKLYVKLGQQVKKGDLLAEIDSTTQINTLNTRKAALASYQAQLVARKTAYDVALSNYQRLSKLYGQKATSLDTLN 118 (369)
T ss_dssp SCSBCCEECCCTTSCCCSSCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHGGGSSCSCGGGHH
T ss_pred CCcEEEEEEECCCCEECCCCEEEEEcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCHHHHH
Confidence 469999999999999999999999986421
Q ss_pred -----------------------------------eeEEecCCCeEEEEEEecCCCccccCce---eEEecc
Q 014822 39 -----------------------------------DMDVETFYDGYLAKIMVDEGGVASVGSA---IALLAE 72 (418)
Q Consensus 39 -----------------------------------~~~i~a~~~G~v~~~~~~~g~~v~~g~~---l~~i~~ 72 (418)
...|+||++|+|.++.+.+|+.|..|++ |+.|.+
T Consensus 119 ~a~~~~~~a~a~~~~~~~~l~~~~~~l~~a~~~l~~~~i~AP~~G~V~~~~~~~G~~v~~g~~~~~l~~i~~ 190 (369)
T 4dk0_A 119 TAKATLNNAKAEMDVVQENIKQAEIEVNTAETNLGYTKITSPIDGTVISTPVSEGQTVNSNQTTPTIIKVAD 190 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSSCCCSCCSCCCBCCCCTTCBCCTTTSCCCCBBCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCEEECCCCeEEEEeeCCCCCCccCCCCcceEEEEcC
Confidence 1359999999999999999999999998 666654
No 64
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=96.68 E-value=0.0033 Score=61.14 Aligned_cols=59 Identities=19% Similarity=0.227 Sum_probs=49.7
Q ss_pred EEEEEcCCCCeeecCCeEEEEEe----cceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 13 IVSWVRSEGDKLCKGESVVVVES----DKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 13 i~~w~v~~Gd~V~~g~~l~~vet----~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
+.+..++.||.|++||+|++|.. .....+|+||.+|+|.. ....-.|..|+.|+.|...
T Consensus 267 l~~~~v~~Gd~V~~G~~la~I~dp~~~g~~~~~v~Ap~dGiVi~--~~~~~~V~~G~~l~~Ia~~ 329 (331)
T 3na6_A 267 LFEIMIDLGEPVQEGDLVARVWSPDRTGEAPVEYRARRSGVLIS--RHFPGMIKSGDCAAVIGVV 329 (331)
T ss_dssp EEEESSCTTCEECTTCEEEEEECSSCSSCCCEEEECSSSEEEEE--EECSSEECTTCEEEEEECB
T ss_pred EEEEcCCCCCEEcCCCEEEEEEcCccCCCeeEEEEcCCCEEEEE--EeCCCccCCCCEEEEEecc
Confidence 67778999999999999999996 35678999999999965 4446778899999998643
No 65
>2dn8_A Acetyl-COA carboxylase 2; biotin required enzyme, transcarboxylase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.62 E-value=0.00071 Score=53.94 Aligned_cols=47 Identities=21% Similarity=0.306 Sum_probs=42.6
Q ss_pred CCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 27 GESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 27 g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
|..+|.++.++-...|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 5 ~g~~~~~~~~~~~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~le~~ 51 (100)
T 2dn8_A 5 SSGTCVFEKENDPTVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVM 51 (100)
T ss_dssp CCCCCCCCCCCCTTEEECSSCEEEEEESSCTTEEECTTCEEEEEEET
T ss_pred CCEEEEEEcCCCCcEEeCCCCEEEEEEEcCCcCEECCCCEEEEEEec
Confidence 55668888888888999999999999999999999999999999754
No 66
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=96.49 E-value=0.005 Score=60.38 Aligned_cols=59 Identities=20% Similarity=0.229 Sum_probs=51.7
Q ss_pred EEEEEcCCCCeeecCCeEEEEEe----cceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 13 IVSWVRSEGDKLCKGESVVVVES----DKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 13 i~~w~v~~Gd~V~~g~~l~~vet----~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
+++..++.||.|++||+|++|+. .+...+|.||.+|+|... .....|..|+.|+.|...
T Consensus 277 ~~~~~~~~g~~V~~G~~La~i~d~~~~g~~~~~v~Ap~dG~v~~~--~~~~~V~~Gd~l~~ia~~ 339 (354)
T 3cdx_A 277 LFEPTHYVGEEVRTGETAGWIHFVEDVDTAPLELLYRRDGIVWFG--AGPGRVTRGDAVAVVMED 339 (354)
T ss_dssp EEEESCCTTCEECTTSEEEEEECTTSSSCCCEEEECCSCEEEEEE--ECSSEECTTCEEEEEEEE
T ss_pred EEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEcCCCeEEEEE--eCCCccCCCCEEEEEeee
Confidence 78888999999999999999997 478899999999999644 578889999999999643
No 67
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=96.44 E-value=0.0054 Score=60.46 Aligned_cols=59 Identities=10% Similarity=0.071 Sum_probs=50.2
Q ss_pred EEEEEEcCCCCeeecCCeEEEEEe------cceeeEEecCCCeEEEEEEecCCCccccCceeEEecc
Q 014822 12 KIVSWVRSEGDKLCKGESVVVVES------DKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 12 ~i~~w~v~~Gd~V~~g~~l~~vet------~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 72 (418)
=|.+..++.||.|++||+|++|-. .....+|.||.+|+|. .....-.|..|+.|+.|..
T Consensus 299 Gl~~~~v~lGd~V~kG~~la~I~d~~~~g~g~~~~~v~Ap~dGiVi--~~~~~p~V~~G~~l~~i~~ 363 (368)
T 3fmc_A 299 GMVEYLGKVGVPMKATDPLVNLLRLDLYGTGEELTVLRLPEDGVPI--LHFASASVHQGTELYKVMT 363 (368)
T ss_dssp EEEEECSCTTCCBCTTCEEEEEECGGGTTSSCSEEEEECSSSEEEE--EECSSSEECTTCEEEEEEE
T ss_pred EEEEEeCCCCCEeCCCCEEEEEEcCCCCCCCCeeEEEEcCCCEEEE--EEeCCCccCCCCEEEEEee
Confidence 356689999999999999999997 4577899999999994 5556678899999998864
No 68
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=96.02 E-value=0.0053 Score=45.25 Aligned_cols=33 Identities=27% Similarity=0.357 Sum_probs=30.5
Q ss_pred EEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 41 DVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 41 ~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
.|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 1 ~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 33 (72)
T 1z6h_A 1 TVSIQMAGNLWKVHVKAGDQIEKGQEVAILESM 33 (72)
T ss_dssp CEECCSSEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred CEECcccEEEEEEEcCCcCEECCCCEEEEEECC
Confidence 378999999999999999999999999999754
No 69
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=95.90 E-value=0.0076 Score=44.55 Aligned_cols=34 Identities=21% Similarity=0.302 Sum_probs=31.4
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
..|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 6 ~~v~a~~~G~v~~~~v~~G~~V~~G~~l~~i~~~ 39 (74)
T 2d5d_A 6 NVVSAPMPGKVLRVLVRVGDRVRVGQGLLVLEAM 39 (74)
T ss_dssp CEEECSSCEEEEEECCCTTCEECTTCEEEEEEET
T ss_pred eEEecCCCEEEEEEEcCCCCEeCCCCEEEEEecc
Confidence 4689999999999999999999999999999754
No 70
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=95.89 E-value=0.0067 Score=45.38 Aligned_cols=35 Identities=23% Similarity=0.447 Sum_probs=32.1
Q ss_pred eeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 39 DMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
...|.||.+|+|.++++++|+.|..|++|+.++..
T Consensus 8 ~~~v~a~~~G~v~~~~v~~G~~V~~G~~L~~l~~~ 42 (77)
T 1dcz_A 8 EGEIPAPLAGTVSKILVKEGDTVKAGQTVLVLEAM 42 (77)
T ss_dssp SSEEEBSSSCEEEEECCCTTCEECTTSEEEEEEET
T ss_pred CeEEECCCCEEEEEEEcCCcCEEcCCCEEEEEEcc
Confidence 35789999999999999999999999999999754
No 71
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=95.73 E-value=0.0084 Score=51.89 Aligned_cols=59 Identities=22% Similarity=0.374 Sum_probs=51.4
Q ss_pred ceEEEEEEEcCCCCeeec----CCeEEEEEecceeeEEecCCCeEEEEE-------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCK----GESVVVVESDKADMDVETFYDGYLAKI------------------------------- 53 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~----g~~l~~vet~K~~~~i~a~~~G~v~~~------------------------------- 53 (418)
-.|+|+.+. +..|.|-. |+.++...++ ..+.||.+|+|..+
T Consensus 19 ~~G~vv~l~-~v~D~vfs~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHiGidTV~l~G~ 94 (161)
T 1f3z_A 19 LSGEIVNIE-DVPDVVFAEKIVGDGIAIKPTG---NKMVAPVDGTIGKIFETNHAFSIESDSGVELFVHFGIDTVELKGE 94 (161)
T ss_dssp SCEEEEEGG-GSSSHHHHTTSSCEEEEEEECS---SEEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTT
T ss_pred CCeEEEEeE-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEeCCCCEEEEEECccchhcCCC
Confidence 468888876 78888776 8999988876 47899999999988
Q ss_pred ----EecCCCccccCceeEEec
Q 014822 54 ----MVDEGGVASVGSAIALLA 71 (418)
Q Consensus 54 ----~~~~g~~v~~g~~l~~i~ 71 (418)
++++||.|..|++|+.+.
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d 116 (161)
T 1f3z_A 95 GFKRIAEEGQRVKVGDTVIEFD 116 (161)
T ss_dssp TEEECSCTTCEECTTCEEEEEC
T ss_pred ccEEEEeCcCEECCCCEEEEEC
Confidence 899999999999999995
No 72
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=95.56 E-value=0.01 Score=48.16 Aligned_cols=34 Identities=9% Similarity=0.283 Sum_probs=32.0
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
+.|.|+.+|+|.++++++|+.|..|++|+.|...
T Consensus 2 ~~v~a~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~ 35 (116)
T 2k32_A 2 VIIKPQVSGVIVNKLFKAGDKVKKGQTLFIIEQD 35 (116)
T ss_dssp EEECCSSCEEEEEECSCTTSEECTTCEEEEEECT
T ss_pred eEEeCcCCEEEEEEECCCcCEECCCCEEEEECHH
Confidence 5789999999999999999999999999999865
No 73
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=95.37 E-value=0.011 Score=50.77 Aligned_cols=59 Identities=17% Similarity=0.303 Sum_probs=50.7
Q ss_pred ceEEEEEEEcCCCCeeec----CCeEEEEEecceeeEEecCCCeEEEE--------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCK----GESVVVVESDKADMDVETFYDGYLAK-------------------------------- 52 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~----g~~l~~vet~K~~~~i~a~~~G~v~~-------------------------------- 52 (418)
-.|+|+.+. +..|.|-. |+.++...++ ..+.||.+|+|..
T Consensus 14 ~~G~vv~l~-~v~D~vf~~~~~G~Giai~p~~---~~v~AP~~G~V~~v~~t~HAigi~~~~G~evLiHiGidTv~l~G~ 89 (154)
T 2gpr_A 14 CDGTIITLD-EVEDEVFKERMLGDGFAINPKS---NDFHAPVSGKLVTAFPTKHAFGIQTKSGVEILLHIGLDTVSLDGN 89 (154)
T ss_dssp SSEEEECGG-GSSCHHHHTTSSCEEEEEEESS---SEEECSSCEEEEECCTTCSEEEEECTTSCEEEEECSSSGGGGTTC
T ss_pred CCeEEEEee-ECCCccccccceeCeEEEEeCC---CcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECcchhhcCCC
Confidence 368888874 77888777 8999988876 4899999999987
Q ss_pred ---EEecCCCccccCceeEEec
Q 014822 53 ---IMVDEGGVASVGSAIALLA 71 (418)
Q Consensus 53 ---~~~~~g~~v~~g~~l~~i~ 71 (418)
+++++||.|..|++|+.+.
T Consensus 90 gF~~~V~~Gd~V~~G~~L~~~d 111 (154)
T 2gpr_A 90 GFESFVTQDQEVNAGDKLVTVD 111 (154)
T ss_dssp SEEECCCTTCEECTTCEEEEEC
T ss_pred ceEEEEcCCCEEcCCCEEEEEC
Confidence 4899999999999999995
No 74
>2kcc_A Acetyl-COA carboxylase 2; biotinoyl domain, BCCP, BIRA, biotinylation, alternative splicing, ATP-binding, biotin, fatty acid biosynthesis, ligase; NMR {Homo sapiens}
Probab=95.22 E-value=0.0095 Score=45.64 Aligned_cols=35 Identities=23% Similarity=0.320 Sum_probs=31.9
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|.||.+|+|.++++++|+.|..|++|+.|+...
T Consensus 6 ~~v~a~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 40 (84)
T 2kcc_A 6 TVLRSPSAGKLTQYTVEDGGHVEAGSSYAEMEVMK 40 (84)
T ss_dssp TEECCSSSCCEEEESSCTTEEECTTCEEEEEECSS
T ss_pred ceEECCCCEEEEEEECCCCCEECCCCEEEEEEecc
Confidence 46999999999999999999999999999997543
No 75
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=95.11 E-value=0.012 Score=50.99 Aligned_cols=59 Identities=19% Similarity=0.287 Sum_probs=51.1
Q ss_pred ceEEEEEEEcCCCCeeec----CCeEEEEEecceeeEEecCCCeEEEEE-------------------------------
Q 014822 9 TEGKIVSWVRSEGDKLCK----GESVVVVESDKADMDVETFYDGYLAKI------------------------------- 53 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~----g~~l~~vet~K~~~~i~a~~~G~v~~~------------------------------- 53 (418)
-.|+|+.+ .+..|.|-. |+.++..-+ ...++||.+|+|..+
T Consensus 19 ~~G~vv~l-~~v~D~vfs~~~~G~Giai~p~---~~~v~AP~~G~V~~v~~t~hAigi~t~~G~evLiHIGidTV~l~G~ 94 (162)
T 1ax3_A 19 ITGEIHPI-TDVPDQVFSGKMMGDGFAILPS---EGIVVSPVRGKILNVFPTKHAIGLQSDGGREILIHFGIDTVSLKGE 94 (162)
T ss_dssp CSEEEEEG-GGSSSHHHHTCTTSEEEEEEEC---SSEEEESCCEEEEECCSSSSEEEEESSSSCEEEEECSSSTTTTTTT
T ss_pred CceEEEEe-EECCCccccccceeceEEEEeC---CCcEECCCCeEEEEEccCCeEEEEEcCCCCEEEEEECccchhcCCC
Confidence 46999997 778888777 899998876 347899999999988
Q ss_pred ----EecCCCccccCceeEEec
Q 014822 54 ----MVDEGGVASVGSAIALLA 71 (418)
Q Consensus 54 ----~~~~g~~v~~g~~l~~i~ 71 (418)
++++||.|..|++|+.+.
T Consensus 95 gF~~~V~~Gd~V~~G~~L~~~d 116 (162)
T 1ax3_A 95 GFTSFVSEGDRVEPGQKLLEVD 116 (162)
T ss_dssp TEEESCCCCSEECSEEEEEEEC
T ss_pred ccEEEEeCCCEEcCCCEEEEEC
Confidence 889999999999999995
No 76
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=94.78 E-value=0.052 Score=52.51 Aligned_cols=60 Identities=18% Similarity=0.163 Sum_probs=48.4
Q ss_pred EEEEEEEcCCCCeeecCCeEEEEEe----cceeeEEecCCCeEEEEEEecCCCccccCceeEEecc
Q 014822 11 GKIVSWVRSEGDKLCKGESVVVVES----DKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 11 g~i~~w~v~~Gd~V~~g~~l~~vet----~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 72 (418)
+-+....++.|+.|++||+|+++-. .+...+|.||.+|+|. .....-.|..|+.|+.|..
T Consensus 265 ~G~~~~~~~~g~~V~~G~~la~i~dp~~~G~~~~~v~Ap~dGiv~--~~~~~p~V~~Gd~l~~ia~ 328 (332)
T 2qj8_A 265 PGIFEPRCSVMDEVEQGDVVGVLHPMGSLSAASIDIRAQSKSTVF--AIRSAMYVQGNEEVAILAR 328 (332)
T ss_dssp SEEEEECSCTTCEECTTCEEEEEECTTCSSSCCEEEECSSSEEEE--EEECSEEECTTCEEEEEEE
T ss_pred CeEEEEeCCCCCEeCCCCEEEEEECCCCCCCeeEEEEeCCCeEEE--EEeCCCeeCCCCEEEEEee
Confidence 3455678899999999999999964 5677899999999995 4456667888888888753
No 77
>2f1m_A Acriflavine resistance protein A; helical hairpin, lipoyl domain, beta barrel, transport prote; 2.71A {Escherichia coli}
Probab=94.54 E-value=0.033 Score=52.12 Aligned_cols=55 Identities=13% Similarity=0.042 Sum_probs=40.8
Q ss_pred CCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 19 SEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 19 ~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
+.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|..|++|+.|....
T Consensus 3 ~~~~~~~~v~~~G~v~~~-~~~~v~a~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 57 (277)
T 2f1m_A 3 KTEPLQITTELPGRTSAY-RIAEVRPQVSGIILKRNFKEGSDIEAGVSLYQIDPAT 57 (277)
T ss_dssp -------CCEEEEEEECS-EEEEECCSSCEEEEEECSCTTCEECTTSCSEEECCHH
T ss_pred eeeccceEEEEEEEEEee-eEEEEEccccEEEEEEEcCCCCEecCCCEEEEECcHH
Confidence 344444444556777765 4678999999999999999999999999999997654
No 78
>2jku_A Propionyl-COA carboxylase alpha chain, mitochondrial; ligase, biotin, ATP-binding, disease mutation, nucleotide-binding, mitochondrion; HET: PG4; 1.50A {Homo sapiens}
Probab=94.46 E-value=0.019 Score=44.90 Aligned_cols=36 Identities=14% Similarity=0.271 Sum_probs=31.6
Q ss_pred eeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 39 DMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
...|.||.+|+|.++++++|+.|..|++|+.++...
T Consensus 25 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~k 60 (94)
T 2jku_A 25 SSVLRSPMPGVVVAVSVKPGDAVAEGQEICVIEAMK 60 (94)
T ss_dssp CCCCCCSSSCEEEEECCCTTCCCCTTCCCEEEEC--
T ss_pred ceEEECCCCEEEEEEECCCCCEEcCCCEEEEEeccc
Confidence 456899999999999999999999999999997643
No 79
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=94.42 E-value=0.043 Score=48.63 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=26.5
Q ss_pred EEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEE
Q 014822 15 SWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAK 52 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~ 52 (418)
.++|++|+.|++||.||+-. .|-+..+|+|.+
T Consensus 22 ~L~V~dG~~VkkG~~laeWD------PIitE~~G~V~d 53 (193)
T 2xha_A 22 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 53 (193)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEECCCCEEcCCCEEEEeC------cEEEccCEEEEe
Confidence 56899999999999999864 677777887754
No 80
>2ejm_A Methylcrotonoyl-COA carboxylase subunit alpha; biotin-requiring enzyme, biotin, actyl COA carboxylase, fatty acid synthesis, structural genomics; NMR {Homo sapiens}
Probab=94.29 E-value=0.026 Score=44.57 Aligned_cols=36 Identities=14% Similarity=0.261 Sum_probs=32.5
Q ss_pred eeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 39 DMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
...|.||.+|+|.++++++|+.|..|++|+.|+...
T Consensus 14 ~~~v~a~~~G~v~~~~v~~Gd~V~~Gq~L~~ie~~~ 49 (99)
T 2ejm_A 14 QGGPLAPMTGTIEKVFVKAGDKVKAGDSLMVMIAMK 49 (99)
T ss_dssp CSSCBCSSSEEEEEECCCTTEEECSSCEEEEEESSS
T ss_pred ceEEecCCCEEEEEEECCCCCEECCCCEEEEEEccc
Confidence 456899999999999999999999999999997643
No 81
>1bdo_A Acetyl-COA carboxylase; BCCPSC, carboxyl transferase, fatty acid biosynthesis, hamme structure, selenomethionine, ligase, transferase; HET: BTN; 1.80A {Escherichia coli} SCOP: b.84.1.1 PDB: 2bdo_A* 1a6x_A 3bdo_A
Probab=93.83 E-value=0.031 Score=42.03 Aligned_cols=35 Identities=14% Similarity=0.279 Sum_probs=31.5
Q ss_pred eEEecCCCeEEEEE-------EecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKI-------MVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~-------~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|.||..|+|.++ ++++|+.|..|++|+.++...
T Consensus 5 ~~v~a~~~G~v~~~~~~~~~~~v~~G~~V~~G~~l~~ie~~k 46 (80)
T 1bdo_A 5 HIVRSPMVGTFYRTPSPDAKAFIEVGQKVNVGDTLCIVEAMK 46 (80)
T ss_dssp EEEECSSSEEEESSSSTTSCCSCCTTCEECTTCEEEEEEETT
T ss_pred eEEEcCCCeEEEEecccCcccccCCcCEECCCCEEEEEEecc
Confidence 46899999999998 899999999999999997643
No 82
>3fpp_A Macrolide-specific efflux protein MACA; hexameric assembly, membrane fusion protein, drug efflux pump, periplasmic protein; 2.99A {Escherichia coli}
Probab=93.32 E-value=0.069 Score=51.47 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=44.7
Q ss_pred EEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 16 WVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 16 w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..++.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|+.|++|+.|....
T Consensus 9 ~~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~kG~~L~~ld~~~ 66 (341)
T 3fpp_A 9 LIVRPGDLQQSVLATGKLDAL-RKVDVGAQVSGQLKTLSVAIGDKVKKDQLLGVIDPEQ 66 (341)
T ss_dssp ----CCCCCCEEEEEEEEEES-SEEECCCSSCEEEEEECCCTTCEECTTCEEEEECCHH
T ss_pred EEEEEeceeEEEEEEEEEEee-EEEEEeccCCcEEEEEEeCCCCEECCCCEEEEEChHH
Confidence 345666655555566777765 4778999999999999999999999999999997654
No 83
>3lnn_A Membrane fusion protein (MFP) heavy metal cation ZNEB (CZCB-LIKE); structural genomics, PSI-2, protein structure initiative; 2.80A {Cupriavidus metallidurans}
Probab=92.89 E-value=0.059 Score=52.36 Aligned_cols=57 Identities=11% Similarity=0.120 Sum_probs=44.7
Q ss_pred cCCCCeeecCCeEEEEEec-ceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 18 RSEGDKLCKGESVVVVESD-KADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~-K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
++.|+.-..=..-+.|+.+ .-...|.++.+|+|.++++++|+.|..|++|+.|...+
T Consensus 35 v~~~~~~~~~~~~G~v~~~p~~~~~v~~~~~G~V~~v~v~~G~~V~kGq~L~~ld~~~ 92 (359)
T 3lnn_A 35 ATRETVAAPFNLPAMIEADPAKLVKVLPPLAGRIVSLNKQLGDEVKAGDVLFTIDSAD 92 (359)
T ss_dssp CEEEEECCEEEEEEEEECCSSSEEEECCSSCEEEEECCSCTTCEECTTCEEEEEECSS
T ss_pred eeecccceeEEEEEEEEECCCcEEEEeccCCEEEEEEEcCCCCEEcCCCEEEEEChHH
Confidence 3344433444455677764 56789999999999999999999999999999998654
No 84
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=92.55 E-value=0.11 Score=38.61 Aligned_cols=27 Identities=26% Similarity=0.492 Sum_probs=25.0
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEe
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVES 35 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet 35 (418)
..|+|.++++++||.|..|++|+.|++
T Consensus 51 ~~G~v~~~~v~~G~~v~~g~~l~~i~~ 77 (77)
T 2l5t_A 51 VRGKIVKILYREGQVVPVGSTLLQIDT 77 (77)
T ss_dssp CCEEEEEECCCTTCEECSCSEEEEEEC
T ss_pred CCEEEEEEEeCCcCEECCCCEEEEEEC
Confidence 479999999999999999999999974
No 85
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=92.27 E-value=0.15 Score=43.64 Aligned_cols=47 Identities=26% Similarity=0.227 Sum_probs=40.0
Q ss_pred eEEEEEEEcCCCCeeecCCeEEEEEecceeeE-EecCCCeEEEEEEec
Q 014822 10 EGKIVSWVRSEGDKLCKGESVVVVESDKADMD-VETFYDGYLAKIMVD 56 (418)
Q Consensus 10 ~g~i~~w~v~~Gd~V~~g~~l~~vet~K~~~~-i~a~~~G~v~~~~~~ 56 (418)
+|.-+-..+.+|+.|.+||.|+-|.|-|-++- ++||.+|+|.=+.--
T Consensus 108 eG~~V~~i~~~G~rV~kgd~lA~i~T~KGEVR~i~spv~G~Vv~v~e~ 155 (169)
T 3d4r_A 108 EGYKVYPIMDFGFRVLKGYRLATLESKKGDLRYVNSPVSGTVIFMNEI 155 (169)
T ss_dssp CSSEEEECCCCSEEECTTCEEEEEECTTCCEEEEECSSSEEEEEEEEE
T ss_pred CceEEEEEcCcCcEeccCCeEEEEEecCceEEEecCCCcEEEEEEEec
Confidence 56667778999999999999999999998776 999999999755433
No 86
>1gjx_A Pyruvate dehydrogenase; oxidoreductase, lipoyl domain, dihydrolipoyl dehydrogenase, multienzyme complex, post-translational modification; NMR {Neisseria meningitidis} SCOP: b.84.1.1
Probab=91.92 E-value=0.11 Score=38.93 Aligned_cols=33 Identities=12% Similarity=0.192 Sum_probs=29.0
Q ss_pred EecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 42 VETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 42 i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
+-++..|.|.++++++|+.|..|++|+.++...
T Consensus 10 ~g~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (81)
T 1gjx_A 10 IGGHENVDIIAVEVNVGDTIAVDDTLITLETDK 42 (81)
T ss_dssp CSSCSSEEEEEECCCSSCBCCSSCCCEEEECSS
T ss_pred CCCCCcEEEEEEEcCCCCEECCCCEEEEEEeCC
Confidence 335789999999999999999999999997653
No 87
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=91.82 E-value=0.15 Score=38.11 Aligned_cols=28 Identities=11% Similarity=0.239 Sum_probs=26.0
Q ss_pred CeEEEEEEecCCCccccCceeEEeccCh
Q 014822 47 DGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 47 ~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
+|+|.++++++|+.|..|++|+.++...
T Consensus 14 ~G~v~~~~v~~G~~V~~G~~l~~ie~~~ 41 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKVAAEQSLITVEGDK 41 (80)
T ss_dssp CEEEEECCCCTTCEECBTSEEEEEESSS
T ss_pred CEEEEEEEcCCCCEECCCCEEEEEEcCC
Confidence 8999999999999999999999997643
No 88
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=91.82 E-value=0.17 Score=49.28 Aligned_cols=32 Identities=13% Similarity=0.198 Sum_probs=25.9
Q ss_pred EEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEE
Q 014822 15 SWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAK 52 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~ 52 (418)
.++|++|+.|++||.||+-. .|-+..+|+|.+
T Consensus 62 ~l~v~~g~~V~~g~~la~wd------pii~e~~G~v~~ 93 (352)
T 2xhc_A 62 KLHVNNGKDVNKGDLIAEEP------PIYARRSGVIVD 93 (352)
T ss_dssp EESCCTTCEECTTCEEEEEC------CEECSSCEEEEE
T ss_pred EEEecCCCEEcCCCEEEEec------cEEEecceEEEe
Confidence 57899999999999999964 677777777643
No 89
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=91.79 E-value=3.4 Score=41.24 Aligned_cols=62 Identities=15% Similarity=0.076 Sum_probs=40.7
Q ss_pred ceeccCCchhHHHHHHhhhcCCcceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccC
Q 014822 197 ASVVPFTTMQGAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRD 271 (418)
Q Consensus 197 ~~~~~~s~~r~~ia~~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~ 271 (418)
....|+|.+|+.+.-.-......+ |++...+.+.. .+.. ..+-.|+...+++||.||.++..
T Consensus 11 ~~~~Pls~~Q~~~~~~~~~~~~~~-y~~~~~~~l~g-----------~ld~-~~L~~A~~~lv~rh~~LRt~f~~ 72 (493)
T 4hvm_A 11 PGLRRASFLQRGAWRWLREAPPAA-AFAARGLLGSG-----------RIDD-DRLAAAADEVLDAFPLLRVNFVD 72 (493)
T ss_dssp -CEEECCHHHHHHHHHHTTSCGGG-GEEEEEEEEES-----------SCCH-HHHHHHHHHHHHHCGGGGEEEEE
T ss_pred CCCCCCCHHHHHHHHHHhhCCCCc-ceeEEEEEEeC-----------CCCH-HHHHHHHHHHHHhchhceeEEEc
Confidence 456799999998764433333334 66655555532 1232 34567888999999999999853
No 90
>2k7v_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; misfolded dimer, acyltransferase, glycolysis; NMR {Escherichia coli}
Probab=91.72 E-value=0.015 Score=44.59 Aligned_cols=35 Identities=11% Similarity=0.120 Sum_probs=31.2
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
++|.+|.-|+|.++++++|+.|..|++|+.|+...
T Consensus 3 ~~i~~p~~G~v~~~~v~~Gd~V~~G~~L~~ie~~k 37 (85)
T 2k7v_A 3 KEVNVPDIVEVTEVMVKVGDKVAAEQSLITVEGDK 37 (85)
T ss_dssp SCCCCCSCCCCCSCCCSSSCCCCCSSSCCCCSCCC
T ss_pred cEEECCCeEEEEEEEcCCCCEEcCCCEEEEEEccc
Confidence 46788888999999999999999999999997654
No 91
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=91.68 E-value=0.17 Score=39.34 Aligned_cols=30 Identities=17% Similarity=0.157 Sum_probs=27.0
Q ss_pred CCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 45 FYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 45 ~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..+|+|.++++++|+.|..|++|+.++...
T Consensus 16 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~K 45 (93)
T 1k8m_A 16 IREVTVKEWYVKEGDTVSQFDSICEVQSDK 45 (93)
T ss_dssp SCCEEEEEECCCTTCEECSSSCCEEEECSS
T ss_pred CCCEEEEEEEcCCcCEECCCCEEEEEEcCC
Confidence 358999999999999999999999997654
No 92
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=91.54 E-value=0.067 Score=40.08 Aligned_cols=31 Identities=16% Similarity=0.184 Sum_probs=27.6
Q ss_pred cCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 44 TFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 44 a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
++.+|+|.++++++|+.|..|++|+.++...
T Consensus 12 ~~~~G~i~~~~v~~Gd~V~~G~~l~~ie~~k 42 (79)
T 1ghj_A 12 SIADGTVATWHKKPGEAVKRDELIVDIETDK 42 (79)
T ss_dssp SCSCEEECCCSSCTTSEECSSCEEEEEECSS
T ss_pred CCCCEEEEEEEcCCCCEECCCCEEEEEEccc
Confidence 4579999999999999999999999997543
No 93
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=91.51 E-value=0.12 Score=39.51 Aligned_cols=30 Identities=17% Similarity=0.158 Sum_probs=27.0
Q ss_pred CCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 45 FYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 45 ~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..+|+|.++++++|+.|..|++|+.++...
T Consensus 17 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 46 (87)
T 3crk_C 17 MTMGTVQRWEKKVGEKLSEGDLLAEIETDX 46 (87)
T ss_dssp CCEEEEEEECSCTTCEECTTCEEEEEECSS
T ss_pred CCcEEEEEEEcCCCCEEcCCCEEEEEECCc
Confidence 458999999999999999999999998654
No 94
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.90 E-value=0.15 Score=40.06 Aligned_cols=29 Identities=24% Similarity=0.431 Sum_probs=26.5
Q ss_pred CCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 46 YDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 46 ~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|+|.++++++|+.|..|++|+.++...
T Consensus 20 ~~G~i~~~~v~~Gd~V~~G~~L~~ie~~K 48 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAVSAGDALCEIETDK 48 (98)
T ss_dssp SEECEEEESSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEeCCCCEEEEEEccc
Confidence 48999999999999999999999998654
No 95
>3ne5_B Cation efflux system protein CUSB; transmembrane helix, metal transport; 2.90A {Escherichia coli} PDB: 3ooc_A 3opo_A 3ow7_A 4dnt_B 4dop_B 3h9i_A 3h94_A 3h9t_B 3t53_B 3t51_B 3t56_B
Probab=90.70 E-value=0.22 Score=49.50 Aligned_cols=58 Identities=14% Similarity=0.113 Sum_probs=43.7
Q ss_pred EcCCCCeeecCCeEEEEEec-ceeeEEecCCCeEEEEEEe-cCCCccccCceeEEeccCh
Q 014822 17 VRSEGDKLCKGESVVVVESD-KADMDVETFYDGYLAKIMV-DEGGVASVGSAIALLAESE 74 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~-K~~~~i~a~~~G~v~~~~~-~~g~~v~~g~~l~~i~~~~ 74 (418)
.++.|+.-..=...+.|+.+ .-...|.++.+|+|.++++ ++|+.|..|++|+.|...+
T Consensus 98 ~v~~~~~~~~v~~~G~V~~~~~~~~~v~a~~~G~V~~v~V~~~Gd~VkkGq~L~~ld~~~ 157 (413)
T 3ne5_B 98 TVTRGPLTFAQSFPANVSYNEYQYAIVQARAAGFIDKVYPLTVGDKVQKGTPLLDLTIPD 157 (413)
T ss_dssp ECEEECCEEEEEEEEEEEEEEEEEEEECCSSCEEEEEECSCCTTCEECTTCEEEEEECCS
T ss_pred EEEEeecceEEEEEEEEEECCCceEEEecccCEEEEEEEeCCCCCEEcCCCEEEEEcCHH
Confidence 33444444444455666653 4568899999999999998 9999999999999998543
No 96
>1vf7_A Multidrug resistance protein MEXA; alpha hairpin, beta barrel, membrane protein; 2.40A {Pseudomonas aeruginosa} SCOP: f.46.1.1 PDB: 2v4d_A 1t5e_A
Probab=90.41 E-value=0.14 Score=50.04 Aligned_cols=57 Identities=12% Similarity=0.075 Sum_probs=41.0
Q ss_pred EcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 17 VRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
.++.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|..|++|+.|....
T Consensus 22 ~v~~~~~~~~~~~~G~v~~~-~~~~v~a~v~G~V~~v~v~~Gd~V~kGq~L~~ld~~~ 78 (369)
T 1vf7_A 22 TLEAQTVTLNTELPGRTNAF-RIAEVRPQVNGIILKRLFKEGSDVKAGQQLYQIDPAT 78 (369)
T ss_dssp -------CCEEEEEEECEES-CEEEECCSSCEEEEECCSCSSEEECTTSEEEEECCHH
T ss_pred EEEeeccceEEEEEEEEEee-eEEEEEeeCceEEEEEEcCCCCEEcCCCEEEEECcHH
Confidence 45555544444555677754 3678999999999999999999999999999997654
No 97
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=89.86 E-value=6.4 Score=38.28 Aligned_cols=29 Identities=24% Similarity=0.289 Sum_probs=25.8
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
.-|-+.+||-++||+-...|+++|.+...
T Consensus 118 ~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~ 146 (436)
T 1l5a_A 118 HLIYTRAHHIVLDGYGMMLFEQRLSQHYQ 146 (436)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeehhheecHhHHHHHHHHHHHHHH
Confidence 34679999999999999999999998875
No 98
>1iyu_A E2P, dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1iyv_A
Probab=89.57 E-value=0.25 Score=36.83 Aligned_cols=28 Identities=29% Similarity=0.446 Sum_probs=25.2
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEec
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESD 36 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~ 36 (418)
..|+|.++++++|+.|..|++|+.|+..
T Consensus 48 ~~G~v~~~~v~~G~~V~~g~~l~~i~~~ 75 (79)
T 1iyu_A 48 KAGVVKSVSVKLGDKLKEGDAIIELEPA 75 (79)
T ss_dssp SSSEEEEESCCTTCEEETTSEEEEEECC
T ss_pred CCEEEEEEEeCCCCEECCCCEEEEEecC
Confidence 3699999999999999999999999753
No 99
>4dk0_A Putative MACA; alpha-hairpin, lipoyl, beta-barrel, periplasmic protein, MEM protein; 3.50A {Aggregatibacter actinomycetemcomitans} PDB: 4dk1_A
Probab=89.42 E-value=0.1 Score=50.83 Aligned_cols=57 Identities=19% Similarity=0.183 Sum_probs=45.1
Q ss_pred EcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 17 VRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
.++.|+.-..=..-+.|+.. -...|.++.+|+|.++++++|+.|+.|++|+.|....
T Consensus 11 ~v~~~~~~~~v~~~G~v~~~-~~~~v~~~~~G~V~~v~v~~G~~V~~Gq~L~~ld~~~ 67 (369)
T 4dk0_A 11 EVKRGNIEKNVVATGSIESI-NTVDVGAQVSGKITKLYVKLGQQVKKGDLLAEIDSTT 67 (369)
T ss_dssp CCCEECCCCCCEEEEEEECS-SCCCBCCCSCSBCCEECCCTTSCCCSSCCCEECCCHH
T ss_pred EEEecceeEEEEEeEEEEee-eeEEEecCCCcEEEEEEECCCCEECCCCEEEEEcCHH
Confidence 34445555555566777754 4678999999999999999999999999999997654
No 100
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=88.98 E-value=0.18 Score=40.40 Aligned_cols=29 Identities=24% Similarity=0.292 Sum_probs=26.5
Q ss_pred CCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 46 YDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 46 ~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
.+|+|.++++++|+.|..|++|+.|+...
T Consensus 20 ~~G~v~~~~v~~Gd~V~~G~~L~~iE~~K 48 (108)
T 2dne_A 20 QAGTIARWEKKEGDKINEGDLIAEVETDK 48 (108)
T ss_dssp CEEEEEECSSCTTCEECTTSEEEEEECSS
T ss_pred ccEEEEEEEcCCCCEecCCCEEEEEEcCc
Confidence 58999999999999999999999998653
No 101
>2auk_A DNA-directed RNA polymerase beta' chain; sandwich-barrel hybrid motif, transferase; 2.30A {Escherichia coli}
Probab=88.90 E-value=0.4 Score=42.45 Aligned_cols=45 Identities=22% Similarity=0.324 Sum_probs=37.9
Q ss_pred EEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCcc
Q 014822 15 SWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVA 61 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v 61 (418)
.++|++||.|++||.||+. |..+..|-+..+|+|.=-.+.+|.++
T Consensus 63 ~L~V~dG~~V~~G~~laew--Dp~t~pIisE~~G~V~f~dii~G~t~ 107 (190)
T 2auk_A 63 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVRFTDMIDGQTI 107 (190)
T ss_dssp EESSCTTCEECTTCEEEEC--CSSEEEEECSSCEEEEEESCCBTTTE
T ss_pred EEEecCCCEEcCCCEEEEE--cCcCCcEEeccccEEEEEeccCCcce
Confidence 5789999999999999977 78999999999999976556666544
No 102
>1y8o_B Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex; pyruvate dehydrogenase kinase 3, lipoyl-bearing domain; HET: RED ADP; 2.48A {Homo sapiens} SCOP: b.84.1.1 PDB: 1y8n_B* 1y8p_B* 2pnr_C* 2q8i_B* 1fyc_A
Probab=88.90 E-value=0.37 Score=39.88 Aligned_cols=36 Identities=19% Similarity=0.134 Sum_probs=30.1
Q ss_pred eeEEecC------CCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 39 DMDVETF------YDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 39 ~~~i~a~------~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
.++|..| .+|+|.++++++||.|..|++|+.|+...
T Consensus 27 ~~~i~~P~lG~~~~~G~V~~~~V~~Gd~V~~Gd~L~~iEa~K 68 (128)
T 1y8o_B 27 HMQVLLPALSPTMTMGTVQRWEKKVGEKLSEGDLLAEIETDK 68 (128)
T ss_dssp EEEEECCCSSTTCSEEEEEEECSCTTCEECTTCEEEEEECSS
T ss_pred ceeEEcCCCCCCcccEEEEEEecCCCCEecCCCEEEEEEcCc
Confidence 3455555 47999999999999999999999998654
No 103
>2xha_A NUSG, transcription antitermination protein NUSG; 1.91A {Thermotoga maritima}
Probab=88.23 E-value=0.17 Score=44.71 Aligned_cols=46 Identities=20% Similarity=0.236 Sum_probs=35.2
Q ss_pred cCCCCeeecCCeEEEEEecceeeEEecCCCeEEEE--------------------------E--EecCCCccccCceeEE
Q 014822 18 RSEGDKLCKGESVVVVESDKADMDVETFYDGYLAK--------------------------I--MVDEGGVASVGSAIAL 69 (418)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~--------------------------~--~~~~g~~v~~g~~l~~ 69 (418)
|++|+.|+.||+|+ | ...|-|..+|+|.= + ++++||.|..|++|+.
T Consensus 85 V~dG~~V~~GdvLA-----K-d~AIiaEIdG~V~fgkgkrrivI~~~~Ge~~eylIPk~k~i~~~V~eGd~V~~Ge~L~D 158 (193)
T 2xha_A 85 LRVGTKVKQGLPLS-----K-NEEYICELDGKIVEIERMKKVVVQTPDGEQDVYYIPLDVFDRDRIKKGKEVKQGEMLAE 158 (193)
T ss_dssp CCTTCEECTTSBSS-----T-TSCSBCCSSEEEEEEEEEEEEEEECTTSCEEEEEEEGGGCCTTTSCTTCEECTTCEEEC
T ss_pred cCCCCEEcCCCEEe-----c-CCeEEEccceEEEECCCeEEEEEECCCCCEEEEEeCCCCccccccCCCCEECCCCCccc
Confidence 89999999999998 2 45566777777641 2 6788888888887764
No 104
>1pmr_A Dihydrolipoyl succinyltransferase; 2-oxoglutarate dehydrogenase, lipoyl domain, complex, glycolysis; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=88.12 E-value=0.097 Score=39.35 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=26.9
Q ss_pred CCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 45 FYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 45 ~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..+|+|.++++++|+.|..|++|+.++...
T Consensus 14 ~~~G~v~~~~v~~Gd~V~~G~~l~~ie~~k 43 (80)
T 1pmr_A 14 VADATVATWHKKPGDAVVRDEVLVEIETDK 43 (80)
T ss_dssp CSCEECCBCCCCTTCCBSSSCCBCBCCSSS
T ss_pred CccEEEEEEECCCcCEECCCCEEEEEEccc
Confidence 468999999999999999999999997543
No 105
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=88.04 E-value=4 Score=41.78 Aligned_cols=39 Identities=31% Similarity=0.434 Sum_probs=33.6
Q ss_pred EEEEEEchHHHHHHHHHhcC---CCCHHHHHHHHHHHHHhhC
Q 014822 224 VGYTITTDALDALYKKIKSK---GVTMTALLAKATALALVQH 262 (418)
Q Consensus 224 ~~~~vDvt~l~~~~~~~k~~---~~s~~~~~~~Av~~Al~~~ 262 (418)
....++-....++++.+|++ |+|+++++.-|++.++.++
T Consensus 280 ~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~ 321 (519)
T 3fot_A 280 VIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDH 321 (519)
T ss_dssp EEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHH
T ss_pred EEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhh
Confidence 56667777788889999999 9999999999999999884
No 106
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=87.66 E-value=0.75 Score=40.26 Aligned_cols=43 Identities=16% Similarity=0.392 Sum_probs=35.8
Q ss_pred CCeEEEEEecceeeEEecCCCeEEEEE-----------------------------------EecCCCccccCceeEEec
Q 014822 27 GESVVVVESDKADMDVETFYDGYLAKI-----------------------------------MVDEGGVASVGSAIALLA 71 (418)
Q Consensus 27 g~~l~~vet~K~~~~i~a~~~G~v~~~-----------------------------------~~~~g~~v~~g~~l~~i~ 71 (418)
|+-++..=++. .|.||++|+|..+ ++++||.|..|++|+.+.
T Consensus 62 GdG~AI~P~~g---~v~AP~dG~V~~vfpT~HAigi~s~~G~EvLIHIGiDTV~L~G~gF~~~V~~Gd~Vk~Gd~L~~fD 138 (183)
T 3our_B 62 GDGIAIKPTGN---KMVAPVNGTIGKIFETNHAFSIESDDGVELFVHFGIDTVELKGEGFTRIAEEGQTVKAGDTVIEFD 138 (183)
T ss_dssp CEEEEEEECSS---EEECSSSEEEEEECTTSSEEEEEETTSCEEEEECSBSGGGGTTTTEEECSCTTCEECTTCEEEEEC
T ss_pred cCeEEEEcCCC---EEEeCCCeEEEEECCCCCEEEEEeCCCCEEEEEecccccccCCccceEEEeCcCEEcCCCEEEEEC
Confidence 77777665443 6899999999887 899999999999999996
Q ss_pred c
Q 014822 72 E 72 (418)
Q Consensus 72 ~ 72 (418)
-
T Consensus 139 ~ 139 (183)
T 3our_B 139 L 139 (183)
T ss_dssp H
T ss_pred H
Confidence 3
No 107
>3n6r_A Propionyl-COA carboxylase, alpha subunit; protein complex, biotin-dependent carboxylase, ligase; HET: BTI; 3.20A {Ruegeria pomeroyi}
Probab=87.49 E-value=0.41 Score=50.86 Aligned_cols=36 Identities=17% Similarity=0.213 Sum_probs=32.8
Q ss_pred eeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 39 DMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
...|.||..|+|.++++++||.|..||+|+.++...
T Consensus 612 ~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 647 (681)
T 3n6r_A 612 SKMLLCPMPGLIVKVDVEVGQEVQEGQALCTIEAMK 647 (681)
T ss_dssp CSEEECCSCEEEEEECCCTTCEECTTCEEEEEECSS
T ss_pred CCeEECCCcEEEEEEEeCCCCEEcCCCEEEEEEecC
Confidence 346999999999999999999999999999998654
No 108
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=82.45 E-value=0.8 Score=48.81 Aligned_cols=35 Identities=17% Similarity=0.256 Sum_probs=32.3
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|.||..|+|.++++++|+.|..|++|+.|+...
T Consensus 650 ~~v~ap~~G~V~~v~V~~Gd~V~~Gq~L~~iEamK 684 (718)
T 3bg3_A 650 GQIGAPMPGKVIDIKVVAGAKVAKGQPLCVLSAMK 684 (718)
T ss_dssp SCEECSSCEEEEEECSCTTCCBCTTCCCEEEESSS
T ss_pred ceEeCCCCeEEEEEEeCCCCeeCCCCEEEEEeccc
Confidence 46999999999999999999999999999998654
No 109
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=82.19 E-value=0.93 Score=51.03 Aligned_cols=35 Identities=9% Similarity=0.195 Sum_probs=32.5
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|.||..|+|.++++++||.|..||+|+.|+...
T Consensus 1078 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~ieamK 1112 (1150)
T 3hbl_A 1078 SHIGAQMPGSVTEVKVSVGETVKANQPLLITEAMK 1112 (1150)
T ss_dssp SEEECSSSEEEEEECCCTTCEECTTCEEEEEESSS
T ss_pred ceeecCceEEEEEEEeCCCCEECCCCEEEEEEecc
Confidence 46999999999999999999999999999998664
No 110
>3va7_A KLLA0E08119P; carboxylase, ligase; HET: BTI; 2.60A {Kluyveromyces lactis}
Probab=82.13 E-value=0.89 Score=51.49 Aligned_cols=37 Identities=14% Similarity=0.199 Sum_probs=33.6
Q ss_pred eeEEecCCCeEEEEEEecCCCccccCceeEEeccChh
Q 014822 39 DMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESED 75 (418)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~~ 75 (418)
...|.||..|+|.++++++||.|+.||+|+.|+...-
T Consensus 1167 ~~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK~ 1203 (1236)
T 3va7_A 1167 AELLYSEYTGRFWKPVAAVGDHVEAGDGVIIIEAMKT 1203 (1236)
T ss_dssp CEEEECSSCEEEEEESSCTTCEECSSCEEEEEEETTE
T ss_pred CcEEeCCCcEEEEEEEcCCCCEECCCCEEEEEEecCc
Confidence 4569999999999999999999999999999987653
No 111
>3u9t_A MCC alpha, methylcrotonyl-COA carboxylase, alpha-subunit; biotin carboxylase, carboxyltransferase, BT domain, BCCP DOM ligase; 2.90A {Pseudomonas aeruginosa} PDB: 3u9s_A
Probab=78.88 E-value=0.4 Score=50.88 Aligned_cols=35 Identities=14% Similarity=0.401 Sum_probs=0.0
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
-.|.||..|+|.++++++||.|..|++|+.|+...
T Consensus 603 ~~v~ap~~G~v~~~~v~~Gd~V~~g~~l~~iEamK 637 (675)
T 3u9t_A 603 GGLSAPMNGSIVRVLVEPGQTVEAGATLVVLEAMK 637 (675)
T ss_dssp -----------------------------------
T ss_pred CeEECCCCEEEEEEEeCCCCEEcCCCEEEEEEecc
Confidence 45899999999999999999999999999998654
No 112
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=78.09 E-value=1.5 Score=49.38 Aligned_cols=35 Identities=26% Similarity=0.431 Sum_probs=29.7
Q ss_pred EEEcCCCCeeecCCeEEEEEecceeeEEecCCCeEEE
Q 014822 15 SWVRSEGDKLCKGESVVVVESDKADMDVETFYDGYLA 51 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~ 51 (418)
.++|++||.|++||.||+. |--+..|-+.++|+|.
T Consensus 1002 ~l~v~~g~~V~~g~~ia~w--Dp~~~piise~~G~v~ 1036 (1407)
T 3lu0_D 1002 VLAKGDGEQVAGGETVANW--DPHTMPVITEVSGFVR 1036 (1407)
T ss_dssp EESSCSSCEECTTCEEEEC--CSSCCCEECSSCEEEE
T ss_pred EEEEcCCCEecCCCEEEEE--ecCceeEEeccceEEE
Confidence 4689999999999999988 5667788888888774
No 113
>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A
Probab=77.84 E-value=1.6 Score=42.28 Aligned_cols=50 Identities=14% Similarity=0.056 Sum_probs=40.1
Q ss_pred EcCCCCeeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 17 VRSEGDKLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
.++.|+.|++||+|+++- | .+|.+|.+|.+. ... .-.|..|+.++.+...
T Consensus 280 ~~~~g~~V~~G~~La~i~-d---~~v~a~~dG~~i--~~p-~p~V~~G~~~~~i~~~ 329 (350)
T 2bco_A 280 NVENFTSFVHGEVFGHDG-D---KPLMAKNDNEAI--VFP-NRHVAIGQRAALMVCE 329 (350)
T ss_dssp TCCBTEECCTTCEEEEET-T---EEEECSSSSCEE--ESC-CTTCCTTSEEEEEEEE
T ss_pred cccCCCEeCCCCEEEEEC-C---EEEEeCCCCEEE--Eec-CCCCCCCcEEEEEEEE
Confidence 367899999999999995 3 688999999873 344 6789999988887543
No 114
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=75.88 E-value=1.7 Score=48.91 Aligned_cols=35 Identities=14% Similarity=0.349 Sum_probs=28.3
Q ss_pred eEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 40 MDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
..|.||..|+|.++.+++||.|..|++|+.++...
T Consensus 1096 ~~v~ap~~G~v~~~~v~~Gd~V~~G~~l~~iEamK 1130 (1165)
T 2qf7_A 1096 AHVGAPMPGVISRVFVSSGQAVNAGDVLVSIEAMK 1130 (1165)
T ss_dssp TEEECSSCEEEEEECCSSCCCC---CEEEEEEC--
T ss_pred ceeeCCCCeEEEEEEcCCcCEeCCCCEEEEEEccc
Confidence 46999999999999999999999999999997644
No 115
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=74.75 E-value=0.99 Score=38.50 Aligned_cols=24 Identities=13% Similarity=0.270 Sum_probs=20.4
Q ss_pred EEEEcCCCCeeecCCeEEEEEecc
Q 014822 14 VSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
.+.+|++||+|++||+|+++.-++
T Consensus 91 F~~~V~~Gd~V~~G~~L~~~d~~~ 114 (154)
T 2gpr_A 91 FESFVTQDQEVNAGDKLVTVDLKS 114 (154)
T ss_dssp EEECCCTTCEECTTCEEEEECHHH
T ss_pred eEEEEcCCCEEcCCCEEEEECHHH
Confidence 347999999999999999997543
No 116
>2xhc_A Transcription antitermination protein NUSG; 2.45A {Thermotoga maritima}
Probab=73.92 E-value=0.69 Score=44.98 Aligned_cols=28 Identities=21% Similarity=0.252 Sum_probs=20.3
Q ss_pred cCCCCeeecCCeEEEEEecceeeEEecCCCeEEE
Q 014822 18 RSEGDKLCKGESVVVVESDKADMDVETFYDGYLA 51 (418)
Q Consensus 18 v~~Gd~V~~g~~l~~vet~K~~~~i~a~~~G~v~ 51 (418)
|+.|+.|+.||+|+ | ...|-|..+|+|.
T Consensus 125 v~~g~~v~~G~vla-----k-~~aiiaeidG~V~ 152 (352)
T 2xhc_A 125 LRVGTKVKQGLPLS-----K-NEEYICELDGKIV 152 (352)
T ss_dssp CCTTCEECTTCBSB-----S-SSSCBCCSCEEEE
T ss_pred cCCCCEEccCcEEe-----c-CceEEeccceEEE
Confidence 89999999999887 2 3445556666554
No 117
>3our_B EIIA, phosphotransferase system IIA component; exhibit no hydrolase activity1, lyase-transferase complex; 2.20A {Vibrio vulnificus} SCOP: b.84.3.1
Probab=71.22 E-value=2.2 Score=37.29 Aligned_cols=27 Identities=19% Similarity=0.366 Sum_probs=22.7
Q ss_pred EEEEEEEcCCCCeeecCCeEEEEEecc
Q 014822 11 GKIVSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 11 g~i~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
|+--+++|++||+|++||+|+++.-++
T Consensus 115 G~gF~~~V~~Gd~Vk~Gd~L~~fD~~~ 141 (183)
T 3our_B 115 GEGFTRIAEEGQTVKAGDTVIEFDLAL 141 (183)
T ss_dssp TTTEEECSCTTCEECTTCEEEEECHHH
T ss_pred CccceEEEeCcCEEcCCCEEEEECHHH
Confidence 444678999999999999999997544
No 118
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=69.49 E-value=38 Score=38.34 Aligned_cols=28 Identities=18% Similarity=0.169 Sum_probs=24.7
Q ss_pred EEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 384 QVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 384 ~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
-|-+++||-++||+-...|+++|.++..
T Consensus 140 ~l~~~~HHii~DG~S~~~l~~el~~~Y~ 167 (1304)
T 2vsq_A 140 EWVWSYHHIILDGWCFGIVVQDLFKVYN 167 (1304)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEecCceeechhhHHHHHHHHHHHHH
Confidence 4678999999999999999999988764
No 119
>1zy8_K Pyruvate dehydrogenase protein X component, mitochondrial; human, dihydrolipoamide dehydrogenase, dihydrolipoyl dehydrogenase; HET: FAD; 2.59A {Homo sapiens}
Probab=69.39 E-value=0.96 Score=41.22 Aligned_cols=31 Identities=23% Similarity=0.417 Sum_probs=0.0
Q ss_pred CCCeEEEEEEecCCCccccCceeEEeccChh
Q 014822 45 FYDGYLAKIMVDEGGVASVGSAIALLAESED 75 (418)
Q Consensus 45 ~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~~ 75 (418)
-.+|+|.+|++++||.|..|++|+.|+.+..
T Consensus 15 m~eG~I~~w~vk~Gd~V~~Gd~L~~iEtdK~ 45 (229)
T 1zy8_K 15 MEEGNIVKWLKKEGEAVSAGDALCEIETDKA 45 (229)
T ss_dssp -------------------------------
T ss_pred CCcEEEEEEecCCCCEeCCCCEEEEEecCCc
Confidence 3589999999999999999999999976543
No 120
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=66.81 E-value=91 Score=29.78 Aligned_cols=162 Identities=12% Similarity=0.102 Sum_probs=89.7
Q ss_pred EEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEEEEeCC--------C--
Q 014822 223 RVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVDG--------G-- 292 (418)
Q Consensus 223 ~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~av~~~~--------g-- 292 (418)
.....++.....++++.+++.++|++.+++-|.+.+|.++-. + ++-+|+.+..-. |
T Consensus 210 ~~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~L~~~~g-~-------------dv~ig~~~~~R~~~~~~~~vG~f 275 (436)
T 1l5a_A 210 SLSYTLNSQLNHLLLKLANANQIGWPDALVALCALYLESAEP-D-------------APWLWLPFMNRWGSVAANVPGLM 275 (436)
T ss_dssp EEEEECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHST-T-------------CCEEEEEECCCTTSGGGGSCSCC
T ss_pred eeEEecCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhhC-C-------------ceEEeeecccCCChHHhcCcceE
Confidence 445566665566666667777999999999999999987632 1 234555553211 2
Q ss_pred -eEEeE-EeCCCCCCHHHHHHHHHHHHHHHHhCC-CC---------C----CCCCCCeEEEeecCCC--CCCCeEecCCC
Q 014822 293 -LITPV-LQDADKADIYTLSRKWKELVDKARAKL-LQ---------P----HEYNTGTFTLSNLGMF--GVDRFDAILPP 354 (418)
Q Consensus 293 -l~~pv-i~~~~~~~l~~i~~~~~~~~~~a~~~~-l~---------~----~~~~~~t~~iSnlg~~--g~~~~~pii~~ 354 (418)
.++|+ +......++.++.+.+++....+.... +. . ..+..-.|.+.+.+.- +...+...
T Consensus 276 ~n~lplr~~~~~~~t~~~~l~~v~~~~~~~~~h~~~~~~~i~~~l~~~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~--- 352 (436)
T 1l5a_A 276 VNSLPLLRLSAQQTSLGNYLKQSGQAIRSLYLHGRYRIEQIEQDQGLNAEQSYFMSPFINILPFESPHFADCQTELK--- 352 (436)
T ss_dssp CEEEEEECCCCTTCBHHHHHHHHHHHHHHHHHTTTSCHHHHHHHTTCCTTCCBCCCSEEEEECCCCCCCTTCEEEEE---
T ss_pred EEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhcCCCHHHHHHHhcccccCCCccceEEEeeccCccccCCCeeEEE---
Confidence 22444 334556789999999887665554332 11 1 1111233444332211 10000000
Q ss_pred CCceEEEeccceeE--EEE-ccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 355 GTGAIMAVGASEPT--VVA-TKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 355 p~~~il~iG~~~~~--~v~-~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
.+..+....- -+. ..+| .+.+.+.||-.+.+...+.+|++.|..+|+
T Consensus 353 ----~~~~~~~~~l~l~v~~~~~~------~l~~~~~y~~~~~~~~~i~~l~~~~~~~l~ 402 (436)
T 1l5a_A 353 ----VLASGSAEGINFTFRGSPQH------ELCLDITADLASYPQSHWQSHCERFPRFFE 402 (436)
T ss_dssp ----EEEECCCCSEEEEEEECTTS------CEEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred ----ecCCCCccceEEEEEecCCC------cEEEEEEeChhhCCHHHHHHHHHHHHHHHH
Confidence 0111111110 011 1133 277889999999999999888888877764
No 121
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=66.26 E-value=1.2 Score=44.45 Aligned_cols=29 Identities=17% Similarity=0.439 Sum_probs=0.0
Q ss_pred ceEEEEEEEcCCCCeeecCCeEEEEEecc
Q 014822 9 TEGKIVSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 9 ~~g~i~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
..|+|.++++++||.|..|++|+.|+.+.
T Consensus 52 ~~G~v~~i~v~~G~~V~~G~~l~~i~~~~ 80 (428)
T 3dva_I 52 VKGKVLEILVPEGTVATVGQTLITLDAPG 80 (428)
T ss_dssp -----------------------------
T ss_pred CCeEEEEEEeCCCCEeCCCCEEEEEecCC
Confidence 57999999999999999999999998654
No 122
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=65.58 E-value=5.1 Score=39.50 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=27.6
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhcC
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIED 412 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 412 (418)
+-|++++||.++||.-+..|++.+.+++..
T Consensus 152 ~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg 181 (421)
T 2bgh_A 152 TAIGVNLSHKIADVLSLATFLNAWTATCRG 181 (421)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeEEechHHHHHHHHHHHHHHhcC
Confidence 778999999999999999999999998763
No 123
>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*
Probab=62.13 E-value=5.5 Score=38.77 Aligned_cols=34 Identities=9% Similarity=0.003 Sum_probs=30.2
Q ss_pred eeeEEecCCCeEEEEEEecCCCccccCceeEEecc
Q 014822 38 ADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 38 ~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 72 (418)
...-|+||.+|++. ..++.|+.|+.|++|+.|.+
T Consensus 289 ~~~~v~A~~~Gl~~-~~v~lGd~V~kG~~la~I~d 322 (368)
T 3fmc_A 289 NYRKFHAPKAGMVE-YLGKVGVPMKATDPLVNLLR 322 (368)
T ss_dssp GEEEEECSSCEEEE-ECSCTTCCBCTTCEEEEEEC
T ss_pred CcEEEecCCCEEEE-EeCCCCCEeCCCCEEEEEEc
Confidence 34568999999995 79999999999999999986
No 124
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=61.60 E-value=5.9 Score=39.34 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=27.3
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
+-|++++||.++||.-+..|++.+.+++.
T Consensus 157 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r 185 (453)
T 2xr7_A 157 ISIGFTNHHVAGDGATIVKFVRAWALLNK 185 (453)
T ss_dssp EEEEEEECTTTCCSHHHHHHHHHHHHHHH
T ss_pred EEEEEeeeeeeechhHHHHHHHHHHHHhh
Confidence 77899999999999999999999999887
No 125
>1f3z_A EIIA-GLC, glucose-specific phosphocarrier; phosphotransferase, signal transduction, sugar transport; 1.98A {Escherichia coli} SCOP: b.84.3.1 PDB: 1f3g_A 1ggr_A 1gla_F 1glb_F* 1glc_F* 1gld_F* 1gle_F* 1o2f_A 2f3g_A
Probab=61.49 E-value=4.5 Score=34.65 Aligned_cols=22 Identities=18% Similarity=0.421 Sum_probs=19.2
Q ss_pred EEEcCCCCeeecCCeEEEEEec
Q 014822 15 SWVRSEGDKLCKGESVVVVESD 36 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~vet~ 36 (418)
+.+|++||+|++||+|+++.-+
T Consensus 97 ~~~V~~Gd~V~~G~~L~~~d~~ 118 (161)
T 1f3z_A 97 KRIAEEGQRVKVGDTVIEFDLP 118 (161)
T ss_dssp EECSCTTCEECTTCEEEEECHH
T ss_pred EEEEeCcCEECCCCEEEEECHH
Confidence 4489999999999999999754
No 126
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=61.16 E-value=9.1 Score=37.98 Aligned_cols=42 Identities=14% Similarity=0.271 Sum_probs=35.4
Q ss_pred EEecceeeEEecCCCeEEEEE-------------------------------EecCCCccccCceeEEeccChh
Q 014822 33 VESDKADMDVETFYDGYLAKI-------------------------------MVDEGGVASVGSAIALLAESED 75 (418)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~v~~g~~l~~i~~~~~ 75 (418)
+-..+ ..+|.|+.+|+|..| +.+.||.|..|++|+.|-...+
T Consensus 322 ~~~a~-~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 394 (423)
T 2dsj_A 322 LPLAE-EHPLRAEREGVVREVDAYKVGLAVLALGGGRKRKGEPIDHGVGVYLLKKPGDRVERGEALALVYHRRR 394 (423)
T ss_dssp SCCCE-EEEEECSSCEEEEEECHHHHHHHHHHHTSSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEEECSS
T ss_pred CCCCC-eEEEecCCCeEEEEechHHHHHHHHHcCCCcCcCCCCCCcCcCeeeeccCCCEeCCCCeEEEEEeCCc
Confidence 34567 889999999999877 7888999999999999975443
No 127
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=60.48 E-value=7.1 Score=38.78 Aligned_cols=29 Identities=17% Similarity=0.274 Sum_probs=27.3
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
+-|++++||.++||.-+..|++.+.+++.
T Consensus 162 ~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r 190 (454)
T 2e1v_A 162 IAIGITNHHCLGDASTRFCFLKAWTSIAR 190 (454)
T ss_dssp EEEEEEECGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEeeeeecchhHHHHHHHHHHHHhc
Confidence 77899999999999999999999999887
No 128
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=59.83 E-value=6.9 Score=38.77 Aligned_cols=30 Identities=13% Similarity=0.238 Sum_probs=27.6
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhcC
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIED 412 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 412 (418)
+-|++++||.++||.-+..|++.+.+.+..
T Consensus 148 ~~lg~~~~H~v~Dg~g~~~Fl~awa~~~rg 177 (451)
T 2rkv_A 148 LILTVNGQHGAMDMVGQDAVIRLLSKACRN 177 (451)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred eeeeeeehhccccHHHHHHHHHHHHHHhcC
Confidence 778999999999999999999999988764
No 129
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=58.99 E-value=8.2 Score=38.22 Aligned_cols=30 Identities=13% Similarity=0.252 Sum_probs=27.7
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhcC
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIED 412 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 412 (418)
+-|++++||.++||.-...|++.+.+.+..
T Consensus 150 ~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg 179 (439)
T 4g22_A 150 VSLGVGMRHHAADGFSGLHFINSWSDMARG 179 (439)
T ss_dssp EEEEEEECTTTCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEeeeccCcHHHHHHHHHHHHHHhCC
Confidence 778999999999999999999999998754
No 130
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=58.93 E-value=9.5 Score=37.99 Aligned_cols=42 Identities=21% Similarity=0.305 Sum_probs=36.0
Q ss_pred EEecceeeEEecCCCeEEEEE-------------------------------EecCCCccccCceeEEeccCh
Q 014822 33 VESDKADMDVETFYDGYLAKI-------------------------------MVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~v~~g~~l~~i~~~~ 74 (418)
+...+...+|.|+.+|+|..| +.+.||.|..|++|+.|-...
T Consensus 329 ~~~~~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 329 LPKAAYTSTVTAAADGYVAEMAADDIGTAAMWLGAGRAKKEDVIDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp SCCCSEEEEEECSSSEEEEEECHHHHHHHHHHHTTSCSSTTCCCCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCCCCeEEEEecCCCeEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 345778899999999999877 788899999999999997543
No 131
>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}
Probab=58.39 E-value=6.8 Score=37.48 Aligned_cols=36 Identities=25% Similarity=0.301 Sum_probs=30.4
Q ss_pred ceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 37 KADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 37 K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
....-|+||.+|++. -.++.|+.|+.|++|+.|.+.
T Consensus 255 ~~~~~v~A~~~Gl~~-~~v~~Gd~V~~G~~la~I~dp 290 (331)
T 3na6_A 255 DGDCYLFSEHDGLFE-IMIDLGEPVQEGDLVARVWSP 290 (331)
T ss_dssp CSCCCEECSSCEEEE-ESSCTTCEECTTCEEEEEECS
T ss_pred CCcEEEeCCCCeEEE-EcCCCCCEEcCCCEEEEEEcC
Confidence 334568999999885 479999999999999999875
No 132
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=57.69 E-value=10 Score=37.68 Aligned_cols=37 Identities=11% Similarity=0.267 Sum_probs=33.4
Q ss_pred ecceeeEEecCCCeEEEEE-------------------------------EecCCCccccCceeEEec
Q 014822 35 SDKADMDVETFYDGYLAKI-------------------------------MVDEGGVASVGSAIALLA 71 (418)
Q Consensus 35 t~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~v~~g~~l~~i~ 71 (418)
..+...+|.|+.+|+|..| +.+.||.|..|++|+.|-
T Consensus 334 ~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lGagr~~~~d~id~~~Gi~l~~~~G~~V~~g~~l~~i~ 401 (436)
T 3h5q_A 334 QAQYQIEYKAKKSGYVTELVSNDIGVASMMLGAGRLTKEDDIDLAVGIVLNKKIGDKVEEGESLLTIH 401 (436)
T ss_dssp CCSEEEEEECSSCEEEEEECHHHHHHHHHHTTTSCSSTTCCCCTTCEEEESCCTTCEECTTSEEEEEE
T ss_pred CCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCCCCceEEecCCcCEeCCCCeEEEEe
Confidence 4567889999999999988 778999999999999998
No 133
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=57.57 E-value=7.1 Score=36.59 Aligned_cols=22 Identities=23% Similarity=0.302 Sum_probs=15.3
Q ss_pred EEEEEcCCCCeeecCCeEEEEE
Q 014822 13 IVSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 13 i~~w~v~~Gd~V~~g~~l~~ve 34 (418)
-++|++++|+.|++||+|++++
T Consensus 72 ~v~~~~~dG~~v~~g~~v~~i~ 93 (284)
T 1qpo_A 72 RVLDRVEDGARVPPGEALMTLE 93 (284)
T ss_dssp EEEEECCTTCEECTTCEEEEEE
T ss_pred EEEEEcCCCCEecCCcEEEEEE
Confidence 3567777777777777777665
No 134
>1ax3_A Iiaglc, glucose permease IIA domain; phosphotransferase system, sugar transport, transferase, phosphorylation, transmembrane; NMR {Bacillus subtilis} SCOP: b.84.3.1 PDB: 1gpr_A
Probab=56.51 E-value=4.3 Score=34.83 Aligned_cols=24 Identities=29% Similarity=0.457 Sum_probs=20.4
Q ss_pred EEEEcCCCCeeecCCeEEEEEecc
Q 014822 14 VSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
.+.+|++||+|++||+|+++.-++
T Consensus 96 F~~~V~~Gd~V~~G~~L~~~d~~~ 119 (162)
T 1ax3_A 96 FTSFVSEGDRVEPGQKLLEVDLDA 119 (162)
T ss_dssp EEESCCCCSEECSEEEEEEECHHH
T ss_pred cEEEEeCCCEEcCCCEEEEECHHH
Confidence 455899999999999999997544
No 135
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=55.90 E-value=12 Score=37.41 Aligned_cols=43 Identities=12% Similarity=0.246 Sum_probs=36.4
Q ss_pred EEecceeeEEecCCCeEEEEE-------------------------------EecCCCccccCceeEEeccChh
Q 014822 33 VESDKADMDVETFYDGYLAKI-------------------------------MVDEGGVASVGSAIALLAESED 75 (418)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~~-------------------------------~~~~g~~v~~g~~l~~i~~~~~ 75 (418)
+...+...+|.|+.+|+|..| +.+.||.|..|++|+.|-...+
T Consensus 334 ~~~a~~~~~v~a~~~G~v~~i~~~~~g~~~~~lGagr~~~~d~id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~~ 407 (440)
T 2tpt_A 334 LPTAMLTKAVYADTEGFVSEMDTRALGMAVVAMGGGRRQASDTIDYSVGFTDMARLGDQVDGQRPLAVIHAKDE 407 (440)
T ss_dssp SCCCSEEEEECCSSCEEEEEECHHHHHHHHHHHTTSCSSTTCCCCSSCEEESCCCTTCEEBTTBCSEEEEESSH
T ss_pred CCCCCeEEEEecCCCEEEEEechHHHHHHHHHcCCCcCCCCCCCCcCcCeeEeccCCCEECCCCeEEEEecCCH
Confidence 345677889999999999887 7888999999999999975543
No 136
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=55.39 E-value=6.8 Score=36.78 Aligned_cols=21 Identities=14% Similarity=0.494 Sum_probs=13.2
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|++++|+.|++||+|++++
T Consensus 77 v~~~~~dG~~v~~g~~v~~i~ 97 (287)
T 3tqv_A 77 ITWLYSDAQKVPANARIFELK 97 (287)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEE
Confidence 356666666666666666665
No 137
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=55.18 E-value=6.5 Score=36.91 Aligned_cols=21 Identities=14% Similarity=0.164 Sum_probs=12.1
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|++++|+.|++||+|++|+
T Consensus 73 v~~~~~dG~~v~~g~~v~~i~ 93 (285)
T 1o4u_A 73 SKFNVEDGEYLEGTGVIGEIE 93 (285)
T ss_dssp EEESCCTTCEEESCEEEEEEE
T ss_pred EEEEcCCCCCcCCCCEEEEEE
Confidence 345566666666666555554
No 138
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=54.93 E-value=6.9 Score=36.73 Aligned_cols=21 Identities=24% Similarity=0.408 Sum_probs=13.7
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|++++|+.|++||+|++++
T Consensus 74 v~~~~~dG~~v~~g~~v~~i~ 94 (286)
T 1x1o_A 74 FTPLVAEGARVAEGTEVARVR 94 (286)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCCccCCCEEEEEE
Confidence 456666666666666666665
No 139
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=54.61 E-value=7.4 Score=36.71 Aligned_cols=21 Identities=24% Similarity=0.264 Sum_probs=15.2
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|++++|+.|++||+|++++
T Consensus 86 v~~~~~dG~~v~~g~~v~~i~ 106 (300)
T 3l0g_A 86 YEIHKKDGDITGKNSTLVSGE 106 (300)
T ss_dssp EEECCCTTCEECSSCEEEEEE
T ss_pred EEEEeCCCCEeeCCCEEEEEE
Confidence 467777777777777777776
No 140
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=54.35 E-value=8.7 Score=35.73 Aligned_cols=19 Identities=5% Similarity=0.008 Sum_probs=9.5
Q ss_pred EecCCCccccCceeEEecc
Q 014822 54 MVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 54 ~~~~g~~v~~g~~l~~i~~ 72 (418)
.+++|+.+..|++|+.+.-
T Consensus 63 ~~~eG~~v~~g~~~~~v~G 81 (273)
T 2b7n_A 63 TIKDKERFKPKDALMEIRG 81 (273)
T ss_dssp ECCTTCEECTTCEEEEEEE
T ss_pred EcCCCCCcCCCCEEEEEEe
Confidence 4445555555555555543
No 141
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=52.80 E-value=7.9 Score=36.54 Aligned_cols=21 Identities=29% Similarity=0.669 Sum_probs=12.6
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|.+++|+.|.+||+|++|+
T Consensus 88 v~~~~~dG~~v~~g~~l~~v~ 108 (298)
T 3gnn_A 88 VDWRHREGDRMSADSTVCELR 108 (298)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEE
Confidence 356666666666666666555
No 142
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=51.82 E-value=8.3 Score=36.77 Aligned_cols=21 Identities=19% Similarity=0.601 Sum_probs=13.0
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|.+++|+.|.+||+|++|+
T Consensus 110 v~~~~~dG~~v~~g~~l~~v~ 130 (320)
T 3paj_A 110 IEWHVQDGDTLTPNQTLCTLT 130 (320)
T ss_dssp EEESSCTTCEECTTCEEEEEE
T ss_pred EEEEeCCCCEecCCCEEEEEE
Confidence 456666666666666666665
No 143
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=50.19 E-value=9.1 Score=36.09 Aligned_cols=21 Identities=19% Similarity=0.594 Sum_probs=13.4
Q ss_pred EEEEcCCCCeeecCCeEEEEE
Q 014822 14 VSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 14 ~~w~v~~Gd~V~~g~~l~~ve 34 (418)
++|.+++|+.|.+|++|++|+
T Consensus 87 v~~~~~dG~~v~~g~~~~~v~ 107 (296)
T 1qap_A 87 LTWHVDDGDAIHANQTVFELQ 107 (296)
T ss_dssp EEESCCTTCEECTTCEEEEEE
T ss_pred EEEEcCCCCEecCCCEEEEEE
Confidence 456666666666666666665
No 144
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=50.18 E-value=6.3 Score=34.38 Aligned_cols=19 Identities=21% Similarity=0.321 Sum_probs=10.9
Q ss_pred EecCCCccccCceeEEecc
Q 014822 54 MVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 54 ~~~~g~~v~~g~~l~~i~~ 72 (418)
.+++||.|..||+|+.+..
T Consensus 86 ~V~~G~~V~~Gq~IG~vG~ 104 (182)
T 3it5_A 86 QVSNGQQVSADTKLGVYAG 104 (182)
T ss_dssp CCCTTCEECTTCEEEEECS
T ss_pred ccCCCCEEcCCCEEEeecC
Confidence 3555666666666666554
No 145
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=46.54 E-value=2.2e+02 Score=27.88 Aligned_cols=167 Identities=12% Similarity=0.120 Sum_probs=89.1
Q ss_pred EEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEEEEeC------C--C---
Q 014822 224 VGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAVD------G--G--- 292 (418)
Q Consensus 224 ~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~av~~~------~--g--- 292 (418)
....++-....++++..++.++|++.+++-|.+.+|.++ .+. +++-+|+.+..- + |
T Consensus 306 ~~~~l~~~~~~~l~~~a~~~~~T~~~~l~aa~a~~L~~~-------~~~------~dv~~g~~~~gR~~~~~~~~vG~f~ 372 (520)
T 2jgp_A 306 CTIGAGKALTEGLHQLAQATGTTLYMVLLAAYNVLLAKY-------AGQ------EDIIVGTPITGRSHADLEPIVGMFV 372 (520)
T ss_dssp EEEECCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHH-------HTC------SCEEEEEEECCCCSGGGTTCCSCCC
T ss_pred EEEeCCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCC------CCeEEEeccCCCCchhhhccEEeee
Confidence 344455444445555566669999999999999998864 211 334456655431 1 2
Q ss_pred eEEeE-EeCCCCCCHHHHHHHHHHHHHHHHhCC-CC---------C------CCCCCCeEEEeecCCC--CCC--CeEec
Q 014822 293 LITPV-LQDADKADIYTLSRKWKELVDKARAKL-LQ---------P------HEYNTGTFTLSNLGMF--GVD--RFDAI 351 (418)
Q Consensus 293 l~~pv-i~~~~~~~l~~i~~~~~~~~~~a~~~~-l~---------~------~~~~~~t~~iSnlg~~--g~~--~~~pi 351 (418)
.++|+ +......++.++.+.+++....+.... +. . ..+....|.+.+.+.. ... .+.++
T Consensus 373 n~lplr~~~~~~~~~~~~l~~v~~~~~~~~~h~~~p~~~i~~~l~~~r~~~~~~lf~~~~~~~~~~~~~~~~~~~~~~~~ 452 (520)
T 2jgp_A 373 NTLAMRNKPQREKTFSEFLQEVKQNALDAYGHQDYPFEELVEKLAIARDLSRNPLFDTVFTFQNSTEEVMTLPECTLAPF 452 (520)
T ss_dssp EEEEEEECCCTTSBHHHHHHHHHHHHHHHHHTCCSCHHHHHHHTCCCCCTTSCSSCSEEEEEECCCCSCCCCSSEEEEEC
T ss_pred eeeeEEecCCCCCCHHHHHHHHHHHHHHHHHhccCCHHHHHHHhcCCCCCCCCCcEEEEEEEecCCCccccCCCceeEEe
Confidence 22444 344556799999999887665543321 11 0 1111223444444321 111 11221
Q ss_pred CCCCC--ce--EEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHh----cCccc
Q 014822 352 LPPGT--GA--IMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKII----EDPRD 415 (418)
Q Consensus 352 i~~p~--~~--il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~l----e~p~~ 415 (418)
..... .+ -|.+- +...+| -+.+.+.||-.+.+-..+.+|++.|..+| ++|+.
T Consensus 453 ~~~~~~~~~~~~L~l~------~~~~~~------~l~~~~~y~~~~~~~~~i~~l~~~~~~lL~~l~~~p~~ 512 (520)
T 2jgp_A 453 MTDETGQHAKFDLTFS------ATEERE------EMTIGVEYSTSLFTRETMERFSRHFLTIAASIVQNPHI 512 (520)
T ss_dssp SSCSSCSBCSSSEEEE------EEECSS------CEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHCTTC
T ss_pred ecCCCCcceeeeeEEE------EEECCC------eEEEEEEEChhhCCHHHHHHHHHHHHHHHHHHHhCccC
Confidence 11110 00 01110 111133 27788999999999998888887776665 45653
No 146
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=46.26 E-value=10 Score=37.75 Aligned_cols=28 Identities=21% Similarity=0.326 Sum_probs=24.0
Q ss_pred CCceEEEEEEEcCCCCeeecCCeEEEEE
Q 014822 7 TMTEGKIVSWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 7 ~~~~g~i~~w~v~~Gd~V~~g~~l~~ve 34 (418)
-+..+-=+.++++.||.|++||+|++|=
T Consensus 374 ~id~~~Gi~l~~~~G~~V~~g~~l~~i~ 401 (436)
T 3h5q_A 374 DIDLAVGIVLNKKIGDKVEEGESLLTIH 401 (436)
T ss_dssp CCCTTCEEEESCCTTCEECTTSEEEEEE
T ss_pred CCCCCCceEEecCCcCEeCCCCeEEEEe
Confidence 3455667899999999999999999985
No 147
>1zko_A Glycine cleavage system H protein; TM0212, structural genomi center for structural genomics, JCSG, protein structure INI PSI; HET: MSE; 1.65A {Thermotoga maritima} PDB: 2ka7_A
Probab=46.05 E-value=4.1 Score=33.85 Aligned_cols=33 Identities=12% Similarity=0.107 Sum_probs=27.1
Q ss_pred EecCCCeEEEEEEe-cCCCccccCceeEEeccCh
Q 014822 42 VETFYDGYLAKIMV-DEGGVASVGSAIALLAESE 74 (418)
Q Consensus 42 i~a~~~G~v~~~~~-~~g~~v~~g~~l~~i~~~~ 74 (418)
+.+|.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 39 ~a~~~lG~i~~V~lp~vGd~V~~Gd~l~~VEs~K 72 (136)
T 1zko_A 39 HAQEQLGDVVYVDLPEVGREVKKGEVVASIESVK 72 (136)
T ss_dssp HHHHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred hhcccCCCcEEEEecCCCCEEeCCCEEEEEEEcc
Confidence 45677787877777 9999999999999997654
No 148
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=45.81 E-value=10 Score=35.77 Aligned_cols=19 Identities=16% Similarity=0.141 Sum_probs=9.7
Q ss_pred EecCCCccccCceeEEecc
Q 014822 54 MVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 54 ~~~~g~~v~~g~~l~~i~~ 72 (418)
.+++|+.+..|++|+.+.-
T Consensus 76 ~~~dG~~v~~g~~l~~v~G 94 (299)
T 2jbm_A 76 FLPEGSKLVPVARVAEVRG 94 (299)
T ss_dssp SSCTTCEECSSEEEEEEEE
T ss_pred EcCCCCCCCCCCEEEEEEE
Confidence 3445555555555555543
No 149
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=44.00 E-value=3.2e+02 Score=30.75 Aligned_cols=162 Identities=11% Similarity=0.147 Sum_probs=89.8
Q ss_pred EEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEEEEe-CC---------Ce
Q 014822 224 VGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAV-DG---------GL 293 (418)
Q Consensus 224 ~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~av~~-~~---------gl 293 (418)
....++-....++++..++.++|++.+++-|.+..|.++ .+. +++-+|+.+.. .. |.
T Consensus 231 ~~~~l~~~~~~~L~~~a~~~~~T~~~vllaa~a~~L~r~-------tg~------~dvv~G~pvsgR~~~~~~~~~~vG~ 297 (1304)
T 2vsq_A 231 LLFSPSEAETKAFTELAKSQHTTLSTALQAVWSVLISRY-------QQS------GDLAFGTVVSGRPAEIKGVEHMVGL 297 (1304)
T ss_dssp EEECCCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH-------HTC------SEEEEEEEECCCCTTSTTGGGCCSS
T ss_pred EEEecCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh-------cCC------CCEEEEEEeCCCCccchhhhccccc
Confidence 334455444556666677779999999999999998764 222 23446666643 11 22
Q ss_pred ---EEeE-EeCCCCCCHHHHHHHHHHHHHHHHhCC-C---------CCCCCCCCeEEEeecCCCCCC-------C--eEe
Q 014822 294 ---ITPV-LQDADKADIYTLSRKWKELVDKARAKL-L---------QPHEYNTGTFTLSNLGMFGVD-------R--FDA 350 (418)
Q Consensus 294 ---~~pv-i~~~~~~~l~~i~~~~~~~~~~a~~~~-l---------~~~~~~~~t~~iSnlg~~g~~-------~--~~p 350 (418)
++|+ +......+|.++.+.+++....+.... + ....+....|.+.|.+..+.. . ...
T Consensus 298 fvntlplr~~~~~~~s~~~ll~~v~~~~~~a~~hq~~p~~~i~~~l~~~~lf~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 377 (1304)
T 2vsq_A 298 FINVVPRRVKLSEGITFNGLLKRLQEQSLQSEPHQYVPLYDIQSQADQPKLIDHIIVFENYPLQDAKNEESSENGFDMVD 377 (1304)
T ss_dssp CCEEEEEEEECCTTCBHHHHHHHHHHHHHHHGGGTTSCHHHHHHSSSCSSSCCCEEEECSSCHHHHSCCCHHHHSEEEEE
T ss_pred ceeEEEEEecCCCCCcHHHHHHHHHHHHHHhhhcccCCHHHHHHHhCCCcccceeEEEeecccccccccccccCCceeEe
Confidence 2343 445667899999999887766554432 1 111222334445554321100 0 001
Q ss_pred cCCCCCc-eEEEeccceeEEEEccCCeEEEEeEEEEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 351 ILPPGTG-AIMAVGASEPTVVATKDGRIGMKNQMQVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 351 ii~~p~~-~il~iG~~~~~~v~~~~g~i~~r~~m~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
+-..+.. .-|++ .+..++. +.+.+.||..+.|-..+.++++.|..+|+
T Consensus 378 ~~~~~~~~~dL~l-------~~~~~~~------l~~~~~y~~~lf~~~~i~~l~~~~~~lL~ 426 (1304)
T 2vsq_A 378 VHVFEKSNYDLNL-------MASPGDE------MLIKLAYNENVFDEAFILRLKSQLLTAIQ 426 (1304)
T ss_dssp EEECCCCCSSEEE-------EEECSSS------CEEEEEEETTTSCHHHHHHHHHHHHHHHH
T ss_pred eecccccccCeEE-------EEecCCc------EEEEEEECCccCCHHHHHHHHHHHHHHHH
Confidence 0000000 00111 1111222 66889999999999999888887777664
No 150
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=42.52 E-value=23 Score=35.64 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=34.6
Q ss_pred EEecceeeEEecCCCeEEEE-----------------------------EEecCCCccccCceeEEeccCh
Q 014822 33 VESDKADMDVETFYDGYLAK-----------------------------IMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 33 vet~K~~~~i~a~~~G~v~~-----------------------------~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
+-..+...+|.|+.+|+|.. ++.+.||.|..|++|+.|-...
T Consensus 366 l~~a~~~~~v~a~~~G~v~~id~~~~g~~~~~lG~gr~~~~id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 366 LPRAREQEELLAPADGTVELVRALPLALVLHELGAGRAGEPLRLGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp SCCCSEEEEEECSSCEEEEEECHHHHHHHHHHHHC------CCSSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred CCCCCeeEEEECCCCeEEEEecHHHHHHHHHHhCCCCcCCccCCCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 44567788999999999954 4788899999999999996543
No 151
>3it5_A Protease LASA; metallopeptidase, beta-protein, cell membrane, cell out membrane, hydrolase, membrane, metal-binding; 2.00A {Pseudomonas aeruginosa} PDB: 3it7_A*
Probab=42.47 E-value=23 Score=30.76 Aligned_cols=15 Identities=13% Similarity=0.073 Sum_probs=12.2
Q ss_pred eEEecCCCeEEEEEE
Q 014822 40 MDVETFYDGYLAKIM 54 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~ 54 (418)
..|.|+.+|+|...-
T Consensus 49 tpV~A~~~G~V~~~~ 63 (182)
T 3it5_A 49 YSVVAAHAGTVRVLS 63 (182)
T ss_dssp CEEECSSSEEEEEEE
T ss_pred CEEEeccCEEEEEEC
Confidence 689999999997753
No 152
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=41.75 E-value=17 Score=34.82 Aligned_cols=28 Identities=14% Similarity=0.137 Sum_probs=25.3
Q ss_pred EEEEeecccccchHHHHHHHHHHHHHhc
Q 014822 384 QVNVTADHRVIYGADLASFLQTLAKIIE 411 (418)
Q Consensus 384 ~lslt~DHRviDG~~aa~Fl~~l~~~le 411 (418)
-|.+++||-++||+-...|+++|.++..
T Consensus 117 ~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~ 144 (422)
T 1q9j_A 117 ELTLYLHHCMADGHHGAVLVDELFSRYT 144 (422)
T ss_dssp EEEEEEEGGGCCHHHHHHHHHHHHHHHH
T ss_pred EEEEEeceEEEchhhHHHHHHHHHHHHH
Confidence 4679999999999999999999988764
No 153
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=41.35 E-value=16 Score=36.26 Aligned_cols=30 Identities=23% Similarity=0.463 Sum_probs=24.8
Q ss_pred CceEEEEEEEcCCCCeeecCCeEEEEEecc
Q 014822 8 MTEGKIVSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 8 ~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
+..+.=+.++++.||.|++||+|++|=+++
T Consensus 364 id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 393 (423)
T 2dsj_A 364 IDHGVGVYLLKKPGDRVERGEALALVYHRR 393 (423)
T ss_dssp CCTTCEEEESCCTTCEECTTSEEEEEEECS
T ss_pred CCcCcCeeeeccCCCEeCCCCeEEEEEeCC
Confidence 445556889999999999999999996553
No 154
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=40.94 E-value=16 Score=36.37 Aligned_cols=30 Identities=20% Similarity=0.378 Sum_probs=24.8
Q ss_pred CceEEEEEEEcCCCCeeecCCeEEEEEecc
Q 014822 8 MTEGKIVSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 8 ~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
+..+.=+.++++.||.|++||+|++|=+++
T Consensus 372 ~d~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 401 (433)
T 1brw_A 372 IDLAVGIVLHKKIGDRVQKGEALATIHSNR 401 (433)
T ss_dssp CCTTCEEEESCCTTCEECTTCEEEEEEESS
T ss_pred CCcCcCeeEeccCCCEECCCCeEEEEEcCC
Confidence 445556889999999999999999996654
No 155
>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}
Probab=40.69 E-value=24 Score=33.92 Aligned_cols=36 Identities=17% Similarity=0.080 Sum_probs=30.1
Q ss_pred ceeeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 37 KADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 37 K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
+...-++|+.+|.+ +..++.|+.|+.|++|+.+.+.
T Consensus 265 ~~~~~v~A~~~G~~-~~~~~~g~~V~~G~~La~i~d~ 300 (354)
T 3cdx_A 265 EADAYVMAPRTGLF-EPTHYVGEEVRTGETAGWIHFV 300 (354)
T ss_dssp CGGGEEECSSCEEE-EESCCTTCEECTTSEEEEEECT
T ss_pred CCcEEEECCCCEEE-EEeCCCCCEeCCCCEEEEEECC
Confidence 44566899999966 5678999999999999999864
No 156
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=40.25 E-value=12 Score=34.21 Aligned_cols=26 Identities=12% Similarity=0.157 Sum_probs=21.2
Q ss_pred EEEEEEEcCCCCeeecCCeEEEEEec
Q 014822 11 GKIVSWVRSEGDKLCKGESVVVVESD 36 (418)
Q Consensus 11 g~i~~w~v~~Gd~V~~g~~l~~vet~ 36 (418)
+-+.++.|++||.|++||+|+.+...
T Consensus 130 ~HL~~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 130 QSLSEVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp EEESEESCCTTCEECTTCEEEECBCC
T ss_pred ecCCccccCCCCEECCCCEEEEeCCc
Confidence 44557789999999999999998754
No 157
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=39.83 E-value=13 Score=34.89 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=14.0
Q ss_pred EEecCCCccccCceeEEeccC
Q 014822 53 IMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 53 ~~~~~g~~v~~g~~l~~i~~~ 73 (418)
+.|++|+.|..|++|+.+...
T Consensus 239 i~Vk~Gq~V~~GqvIG~vG~T 259 (291)
T 1qwy_A 239 LTVSAGDKVKAGDQIAYSGST 259 (291)
T ss_dssp ECCCTTCEECTTCEEEECCCC
T ss_pred cccCCcCEECCCCEEEEECCC
Confidence 456677777777777776544
No 158
>3d4r_A Domain of unknown function from the PFAM-B_34464; structural genomics, joint center for structural genomics; HET: MSE; 2.20A {Methanococcus maripaludis}
Probab=39.71 E-value=18 Score=30.90 Aligned_cols=41 Identities=24% Similarity=0.281 Sum_probs=32.2
Q ss_pred eeecCCeEEEEEecceeeEEecCCCeEEEEEEecCCCccccCceeEEeccCh
Q 014822 23 KLCKGESVVVVESDKADMDVETFYDGYLAKIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 23 ~V~~g~~l~~vet~K~~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
.+++|+.|+.++ .+|+..-..+.+|+.|..|+.|+.+.+..
T Consensus 95 ~lkkGt~L~lvp-----------aeG~~V~~i~~~G~rV~kgd~lA~i~T~K 135 (169)
T 3d4r_A 95 YLKAGTKLISVP-----------AEGYKVYPIMDFGFRVLKGYRLATLESKK 135 (169)
T ss_dssp EECTTCBCEEEE-----------ECSSEEEECCCCSEEECTTCEEEEEECTT
T ss_pred EEcCCCEEEEEE-----------eCceEEEEEcCcCcEeccCCeEEEEEecC
Confidence 356677777765 46777778899999999999999997643
No 159
>1hpc_A H protein of the glycine cleavage system; transit peptide; HET: LPA; 2.00A {Pisum sativum} SCOP: b.84.1.1 PDB: 1dxm_A* 1htp_A*
Probab=39.67 E-value=16 Score=30.00 Aligned_cols=33 Identities=9% Similarity=0.071 Sum_probs=27.1
Q ss_pred EecCCCeEEEEEEe-cCCCccccCceeEEeccCh
Q 014822 42 VETFYDGYLAKIMV-DEGGVASVGSAIALLAESE 74 (418)
Q Consensus 42 i~a~~~G~v~~~~~-~~g~~v~~g~~l~~i~~~~ 74 (418)
+..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 30 ~a~~~lG~i~~v~lp~~G~~V~~g~~l~~vEs~K 63 (131)
T 1hpc_A 30 HAQDHLGEVVFVELPEPGVSVTKGKGFGAVESVK 63 (131)
T ss_dssp HHHHHHCSEEEEECCCTTCEECBTSEEEEEEESS
T ss_pred hhcccCCCceEEEecCCCCEEeCCCEEEEEEecc
Confidence 34566788888887 9999999999999997543
No 160
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=39.49 E-value=13 Score=34.73 Aligned_cols=20 Identities=15% Similarity=0.091 Sum_probs=10.0
Q ss_pred EEEcCCCCeeecCCeEEEEE
Q 014822 15 SWVRSEGDKLCKGESVVVVE 34 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~ve 34 (418)
++.|++||.|++||.|+.+.
T Consensus 231 ~i~V~~G~~V~~Gq~IG~vG 250 (282)
T 2hsi_A 231 KIDVKLGQQVPRGGVLGKVG 250 (282)
T ss_dssp EECSCTTCEECTTCEEEECC
T ss_pred ccccCCcCEECCCCEEEEEC
Confidence 33455555555555555443
No 161
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=38.92 E-value=18 Score=36.31 Aligned_cols=30 Identities=20% Similarity=0.271 Sum_probs=24.3
Q ss_pred CceEEEEEEEcCCCCeeecCCeEEEEEecc
Q 014822 8 MTEGKIVSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 8 ~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
+..+.=+.++++.||.|++||+|++|=+++
T Consensus 407 id~~~Gi~l~~k~G~~V~~g~~l~~i~~~~ 436 (474)
T 1uou_A 407 LRLGVGAELLVDVGQRLRRGTPWLRVHRDG 436 (474)
T ss_dssp CCSSCEEEECSCTTCEECTTCEEEEEEESS
T ss_pred cCCCCceEEEccCCCEECCCCeEEEEEcCC
Confidence 334455789999999999999999996553
No 162
>1baz_A ARC repressor; transcription regulation; 1.90A {Enterobacteria phage P22} SCOP: a.43.1.1 PDB: 1bdv_A* 1arq_A 1arr_A 1bdt_A* 1par_A* 1myk_A 1qtg_A 1b28_A 1myl_A
Probab=38.67 E-value=75 Score=21.36 Aligned_cols=46 Identities=11% Similarity=0.221 Sum_probs=29.9
Q ss_pred cceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCc
Q 014822 219 VPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVN 266 (418)
Q Consensus 219 iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln 266 (418)
...|++ .++-.--.++....+..+.|++.++.+++.+++..-..++
T Consensus 7 ~~~~~l--Rlp~eL~~~l~~~A~~~grS~N~~i~~~L~~~l~~~~r~~ 52 (53)
T 1baz_A 7 MPQVNL--RWPREVLDLVRKVAEENGRSVNSEIYQRVMESFKKEGRIG 52 (53)
T ss_dssp SCEEEE--ECCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHTTSSC
T ss_pred CCeeEE--ECCHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhccccC
Confidence 444443 3444333333444455699999999999999998765443
No 163
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=37.96 E-value=2.1e+02 Score=26.87 Aligned_cols=86 Identities=14% Similarity=0.082 Sum_probs=54.5
Q ss_pred EEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccCCCeEEEcCceeEEEEEEe-C--------C---
Q 014822 224 VGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRDGNSFIYNSSINIAVAVAV-D--------G--- 291 (418)
Q Consensus 224 ~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~~~~i~~~~~i~i~~av~~-~--------~--- 291 (418)
....++.....++++.+++.++|++.+++-|.+.+|.++ ...+. +.+-+|+.+.. . .
T Consensus 214 ~~~~l~~~~~~~l~~~a~~~~~t~~~~l~aa~~~~l~r~-----~~~~~------~~v~~g~~~~~R~~~~~~~~~~~~~ 282 (422)
T 1q9j_A 214 TRLWLSKQQTSDLMAFGREHRLSLNAVVAAAILLTEWQL-----RNTPH------VPIPYVYPVDLRFVLAPPVAPTEAT 282 (422)
T ss_dssp EEECCCHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHHHH-----HTCSS------CCEEEEEEEETTTTSSSCCCTTTBS
T ss_pred eEEEeCHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHhc-----ccCCC------ceEEEeeeeecccccCCCCChhhhh
Confidence 444556555666677777789999999999999999975 11111 33445555542 1 1
Q ss_pred ---CeEEeEEeCCCCCCHHHHHHHHHHHHHHH
Q 014822 292 ---GLITPVLQDADKADIYTLSRKWKELVDKA 320 (418)
Q Consensus 292 ---gl~~pvi~~~~~~~l~~i~~~~~~~~~~a 320 (418)
|.++-.+......++.++.+.+++....+
T Consensus 283 ~~vG~f~n~lp~~~~~~~~~~l~~v~~~~~~~ 314 (422)
T 1q9j_A 283 NLLGAASYLAEIGPNTDIVDLASDIVATLRAD 314 (422)
T ss_dssp CCEEEEEEEECCCSSCCHHHHHHHHHHHHHHH
T ss_pred hhheeeeeeeeccCCCCHHHHHHHHHHHHHHH
Confidence 22333344445678999988887765554
No 164
>3lu0_D DNA-directed RNA polymerase subunit beta'; E. coli RNA polymerase, nucleotidyltransferase, transcription, transferase; 11.20A {Escherichia coli} PDB: 3iyd_D*
Probab=37.18 E-value=7.6 Score=43.82 Aligned_cols=23 Identities=17% Similarity=0.349 Sum_probs=19.0
Q ss_pred EEcCCCCeeecCCeEEEE--Eecce
Q 014822 16 WVRSEGDKLCKGESVVVV--ESDKA 38 (418)
Q Consensus 16 w~v~~Gd~V~~g~~l~~v--et~K~ 38 (418)
+.|++|+.|+.||+|+.+ |+.|.
T Consensus 1107 ~~v~~g~~v~~g~vlakip~~~~k~ 1131 (1407)
T 3lu0_D 1107 VQLEDGVQISSGDTLARIPQESGGT 1131 (1407)
T ss_dssp CCCCSSCEECTTCEEECCCCCCCCS
T ss_pred EEecCCCEeccCceEEecchhhccc
Confidence 468999999999999987 55554
No 165
>3tuf_B Stage II sporulation protein Q; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_B
Probab=36.20 E-value=31 Score=31.48 Aligned_cols=22 Identities=14% Similarity=0.274 Sum_probs=19.6
Q ss_pred EEEecCCCccccCceeEEeccC
Q 014822 52 KIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 52 ~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
++.|+.|+.|..|++|+.+...
T Consensus 134 ~i~Vk~Gd~V~~Gq~IG~vG~t 155 (245)
T 3tuf_B 134 EVSVEQGDKVKQNQVIGKSGKN 155 (245)
T ss_dssp EESCCTTCEECTTCEEEECBCC
T ss_pred ccccCCCCEECCCCEEEEeCCc
Confidence 5678999999999999999765
No 166
>2lmc_B DNA-directed RNA polymerase subunit beta; transferase, transcription; NMR {Escherichia coli k-12}
Probab=34.47 E-value=4.9 Score=30.45 Aligned_cols=15 Identities=20% Similarity=0.457 Sum_probs=12.0
Q ss_pred EcCCCCeeecCCeEE
Q 014822 17 VRSEGDKLCKGESVV 31 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~ 31 (418)
+|++||.|++||.|.
T Consensus 68 ~V~eGd~V~~G~~Lt 82 (84)
T 2lmc_B 68 NVFEGERVERGDVIS 82 (84)
T ss_dssp SSCTTEEECBSCSSB
T ss_pred EeCCCCEECCCCCcc
Confidence 588888888888764
No 167
>2hsi_A Putative peptidase M23; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 1.90A {Pseudomonas aeruginosa PAO1}
Probab=33.99 E-value=35 Score=31.79 Aligned_cols=23 Identities=22% Similarity=0.280 Sum_probs=19.6
Q ss_pred EEEecCCCccccCceeEEeccCh
Q 014822 52 KIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 52 ~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
++.+++||.|..||+|+.+...+
T Consensus 231 ~i~V~~G~~V~~Gq~IG~vG~tG 253 (282)
T 2hsi_A 231 KIDVKLGQQVPRGGVLGKVGATG 253 (282)
T ss_dssp EECSCTTCEECTTCEEEECCCTT
T ss_pred ccccCCcCEECCCCEEEEECCCC
Confidence 55789999999999999997654
No 168
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=33.44 E-value=18 Score=33.17 Aligned_cols=19 Identities=11% Similarity=0.424 Sum_probs=10.0
Q ss_pred EecCCCccccCceeEEecc
Q 014822 54 MVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 54 ~~~~g~~v~~g~~l~~i~~ 72 (418)
.+++||.|..||+|+.+..
T Consensus 183 ~V~~G~~V~~Gq~IG~vG~ 201 (252)
T 3nyy_A 183 ELEKGDPVKAGDLLGYMGD 201 (252)
T ss_dssp SCCTTCEECTTCEEEECBC
T ss_pred cCCCCCEECCCCEEEEECC
Confidence 3455555555555555543
No 169
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=33.29 E-value=19 Score=33.74 Aligned_cols=9 Identities=11% Similarity=0.176 Sum_probs=5.4
Q ss_pred eEEEeccce
Q 014822 358 AIMAVGASE 366 (418)
Q Consensus 358 ~il~iG~~~ 366 (418)
-.+++|+..
T Consensus 272 D~i~vGs~i 280 (294)
T 3c2e_A 272 DIYSTSSIH 280 (294)
T ss_dssp SEEECGGGT
T ss_pred CEEEEechh
Confidence 456777643
No 170
>3vr4_A V-type sodium ATPase catalytic subunit A; V-ATPase, rotary motor, P-loop, hydrolas ATPase, ATP binding; HET: MSE B3P; 2.17A {Enterococcus hirae} PDB: 3vr3_A* 3vr2_A* 3vr5_A 3vr6_A*
Probab=32.84 E-value=63 Score=33.35 Aligned_cols=53 Identities=19% Similarity=0.364 Sum_probs=39.1
Q ss_pred EcCCCCeeecCCeEEEEEecc-eeeEE--ecCCCeEEEEEEecCCCccccCceeEEecc
Q 014822 17 VRSEGDKLCKGESVVVVESDK-ADMDV--ETFYDGYLAKIMVDEGGVASVGSAIALLAE 72 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~K-~~~~i--~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~ 72 (418)
.+++||.|..||.+++|.-.. ....| +....|+|+.| .+| ...+-++++.+++
T Consensus 130 ~~~~Gd~v~~g~i~g~v~e~~~i~h~im~pp~~~g~v~~i--~~g-~~~v~~~v~~i~~ 185 (600)
T 3vr4_A 130 TIEEGTEVSAGDIIGYVDETKIIQHKIMVPNGIKGTVQKI--ESG-SFTIDDPICVIET 185 (600)
T ss_dssp CSCTTCEECTTCEEEEEECSSSCEEEEECCTTCCEEEEEE--CCE-EECTTSCCEEEEE
T ss_pred ccccCCEecCCceEEEEecCCceeeeeecCCCCCceEEEe--cCC-cceeceeEEEEec
Confidence 489999999999999985333 34554 33468999886 555 4577888888864
No 171
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=32.72 E-value=16 Score=36.36 Aligned_cols=30 Identities=10% Similarity=0.107 Sum_probs=24.8
Q ss_pred CceEEEEEEEcCCCCeeecCCeEEEEEecc
Q 014822 8 MTEGKIVSWVRSEGDKLCKGESVVVVESDK 37 (418)
Q Consensus 8 ~~~g~i~~w~v~~Gd~V~~g~~l~~vet~K 37 (418)
+..+.=+.++++.||.|++||+|++|=+++
T Consensus 377 id~~~Gi~~~~k~g~~v~~g~~l~~i~~~~ 406 (440)
T 2tpt_A 377 IDYSVGFTDMARLGDQVDGQRPLAVIHAKD 406 (440)
T ss_dssp CCSSCEEESCCCTTCEEBTTBCSEEEEESS
T ss_pred CCcCcCeeEeccCCCEECCCCeEEEEecCC
Confidence 445556789999999999999999996553
No 172
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=32.64 E-value=33 Score=34.09 Aligned_cols=30 Identities=10% Similarity=0.172 Sum_probs=26.4
Q ss_pred EEEEEeecccccchHHHHHHHHHHHHHhcC
Q 014822 383 MQVNVTADHRVIYGADLASFLQTLAKIIED 412 (418)
Q Consensus 383 m~lslt~DHRviDG~~aa~Fl~~l~~~le~ 412 (418)
.-|-+++||-++||+-...|+++|.+....
T Consensus 214 ~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~ 243 (520)
T 2jgp_A 214 YVLFTDMHHSISDGVSSGILLAEWVQLYQG 243 (520)
T ss_dssp EEEEEEEBGGGCCHHHHHHHHHHHHHHHTT
T ss_pred EEEEEEccceeecHhHHHHHHHHHHHHHcc
Confidence 346789999999999999999999988764
No 173
>4etm_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.60A {Bacillus subtilis}
Probab=32.14 E-value=26 Score=29.99 Aligned_cols=33 Identities=3% Similarity=0.119 Sum_probs=25.8
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAE 176 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~ 176 (418)
.+.|.+++.++++|||++.-. .-.|+.+|++.|
T Consensus 67 ~~d~~a~~~l~~~Gid~s~h~----ar~l~~~d~~~~ 99 (173)
T 4etm_A 67 PPHEGTQEILRREGISFDGML----ARQVSEQDLDDF 99 (173)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCCHHHHHHHHHCCccccCCc----cccCCHhhcCCC
Confidence 467999999999999998433 235888888755
No 174
>3nyy_A Putative glycyl-glycine endopeptidase LYTM; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE 2PE SO4; 1.60A {Ruminococcus gnavus}
Probab=31.97 E-value=39 Score=30.88 Aligned_cols=16 Identities=19% Similarity=0.156 Sum_probs=11.9
Q ss_pred eEEecCCCeEEEEEEe
Q 014822 40 MDVETFYDGYLAKIMV 55 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~ 55 (418)
..|.|+.+|+|..+-.
T Consensus 140 ~pV~A~~~G~V~~~g~ 155 (252)
T 3nyy_A 140 YPVVSMTDGVVTEKGW 155 (252)
T ss_dssp SEEECSSCEEEEEEEE
T ss_pred ceEEeccCEEEEEEEe
Confidence 3788888888876644
No 175
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=30.86 E-value=2.7e+02 Score=27.05 Aligned_cols=95 Identities=11% Similarity=-0.052 Sum_probs=51.9
Q ss_pred eEEEEEEEEchHHHHHHHHHhcCCCC--HHHHHHHHHHHHHhhC----CcCcccccCCCeEEEcCceeEEEEEEe---CC
Q 014822 221 TFRVGYTITTDALDALYKKIKSKGVT--MTALLAKATALALVQH----PVVNSSCRDGNSFIYNSSINIAVAVAV---DG 291 (418)
Q Consensus 221 ~~~~~~~vDvt~l~~~~~~~k~~~~s--~~~~~~~Av~~Al~~~----P~ln~~~~~~~~i~~~~~i~i~~av~~---~~ 291 (418)
.......++.....++++.+++.++| ++.+++-|.+.+|.++ +.....-. --+++-+|+.+.. ++
T Consensus 215 ~~~~~~~l~~~~~~~l~~~a~~~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~------g~~dv~~g~~~~gR~~~~ 288 (493)
T 4hvm_A 215 PETSRLRVPGSRWQALTEPGGPLGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGT------GKDSLYLSTEVDLRDHLQ 288 (493)
T ss_dssp CEEEEEEEEHHHHHHHHCC------CHHHHHHHHHHHHHHHC----------------------CEEEEEEEEEHHHHTT
T ss_pred CeeEEEEcCHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHhhhcccccccCcC------CCCCEEEEeeccCCCCcc
Confidence 34456677776666666666667999 9999999999999886 11111001 1245667777653 11
Q ss_pred -----Ce---EEeE-EeCCC--CCCHHHHHHHHHHHHHHHH
Q 014822 292 -----GL---ITPV-LQDAD--KADIYTLSRKWKELVDKAR 321 (418)
Q Consensus 292 -----gl---~~pv-i~~~~--~~~l~~i~~~~~~~~~~a~ 321 (418)
|. ++|+ +.... ..++.++.+.+++....+.
T Consensus 289 ~~~~vG~f~n~lplr~~~~~~~~~t~~~~l~~v~~~~~~~~ 329 (493)
T 4hvm_A 289 LGSVVGPLTDRVVFGVDLTGLREPSFRDLMSRTQAGFLDAV 329 (493)
T ss_dssp CCSBCSCCEEEEEEEEECTTCSSCBHHHHHHHHHHHHHHHH
T ss_pred hhcCeEeeeceeEEEEecCCCcCCCHHHHHHHHHHHHHHHH
Confidence 32 2444 34445 6899999999887655543
No 176
>1onl_A Glycine cleavage system H protein; hybrid barrel-sandwich structure, structural genomics, riken structural genomics/proteomics initiative; 2.50A {Thermus thermophilus} SCOP: b.84.1.1
Probab=30.35 E-value=10 Score=31.01 Aligned_cols=32 Identities=19% Similarity=0.240 Sum_probs=25.4
Q ss_pred ecCCCeEEEEEEe-cCCCccccCceeEEeccCh
Q 014822 43 ETFYDGYLAKIMV-DEGGVASVGSAIALLAESE 74 (418)
Q Consensus 43 ~a~~~G~v~~~~~-~~g~~v~~g~~l~~i~~~~ 74 (418)
..+.-|.|..+.+ +.|+.|..|++|+.|+...
T Consensus 31 a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 63 (128)
T 1onl_A 31 AQDALGDVVYVELPEVGRVVEKGEAVAVVESVK 63 (128)
T ss_dssp HHHHHCSEEEEECBCTTCEECTTCEEEEEEESS
T ss_pred HhhcCCCceEEEecCCCCEEeCCCEEEEEEEcc
Confidence 3455677777776 8999999999999997543
No 177
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=28.76 E-value=45 Score=32.05 Aligned_cols=23 Identities=35% Similarity=0.544 Sum_probs=19.6
Q ss_pred EEEecCCCccccCceeEEeccCh
Q 014822 52 KIMVDEGGVASVGSAIALLAESE 74 (418)
Q Consensus 52 ~~~~~~g~~v~~g~~l~~i~~~~ 74 (418)
++.+++|+.|..|++|+.+...+
T Consensus 283 ~~~v~~G~~V~~G~~Ig~~G~tg 305 (361)
T 2gu1_A 283 KILVKKGQLVKRGQKIALAGATG 305 (361)
T ss_dssp EECCCTTCEECTTCEEEECCCCS
T ss_pred ccccCCcCEECCCCEEEEECCCC
Confidence 45789999999999999997654
No 178
>1jf8_A Arsenate reductase; ptpase I fold, P-loop, sulfinic acid, oxidoreductase; 1.12A {Staphylococcus aureus} SCOP: c.44.1.1 PDB: 1jfv_A 2fxi_A 1lju_A* 1rxi_A 1rxe_A 1ljl_A 2cd7_A 1lk0_A
Probab=28.51 E-value=34 Score=27.70 Aligned_cols=32 Identities=13% Similarity=0.168 Sum_probs=24.4
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEA 175 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~ 175 (418)
.+.|.+.+.++++|||++.- ..-.++..|+..
T Consensus 43 ~~~p~a~~~l~~~Gid~s~~----~ar~l~~~~~~~ 74 (131)
T 1jf8_A 43 GVNPKAIEAMKEVDIDISNH----TSDLIDNDILKQ 74 (131)
T ss_dssp CCCHHHHHHHHHTTCCCTTC----CCCBCCHHHHHH
T ss_pred CCCHHHHHHHHHcCCCcccC----ccccCChHHhcc
Confidence 47899999999999999743 234577777754
No 179
>2gu1_A Zinc peptidase; alpha/beta, beta barrel, structural genomics, PSI, protein structure initiative; 1.90A {Vibrio cholerae}
Probab=28.36 E-value=25 Score=33.91 Aligned_cols=25 Identities=8% Similarity=0.279 Sum_probs=20.7
Q ss_pred EEEEEEcCCCCeeecCCeEEEEEec
Q 014822 12 KIVSWVRSEGDKLCKGESVVVVESD 36 (418)
Q Consensus 12 ~i~~w~v~~Gd~V~~g~~l~~vet~ 36 (418)
-+.++.|++||.|++||+|+.+.+.
T Consensus 280 hl~~~~v~~G~~V~~G~~Ig~~G~t 304 (361)
T 2gu1_A 280 HLDKILVKKGQLVKRGQKIALAGAT 304 (361)
T ss_dssp EESEECCCTTCEECTTCEEEECCCC
T ss_pred CcCccccCCcCEECCCCEEEEECCC
Confidence 3445789999999999999998643
No 180
>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}
Probab=27.82 E-value=43 Score=31.71 Aligned_cols=34 Identities=9% Similarity=0.062 Sum_probs=29.0
Q ss_pred eeEEecCCCeEEEEEEecCCCccccCceeEEeccC
Q 014822 39 DMDVETFYDGYLAKIMVDEGGVASVGSAIALLAES 73 (418)
Q Consensus 39 ~~~i~a~~~G~v~~~~~~~g~~v~~g~~l~~i~~~ 73 (418)
..-++|+..|.+. -.++.|+.|+.|++|+.+.+.
T Consensus 257 ~~~~~a~~~G~~~-~~~~~g~~V~~G~~la~i~dp 290 (332)
T 2qj8_A 257 SDQLKSPSPGIFE-PRCSVMDEVEQGDVVGVLHPM 290 (332)
T ss_dssp GGEEECSSSEEEE-ECSCTTCEECTTCEEEEEECT
T ss_pred ceEEeCCCCeEEE-EeCCCCCEeCCCCEEEEEECC
Confidence 3457899999886 678889999999999999764
No 181
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=27.46 E-value=59 Score=32.95 Aligned_cols=32 Identities=13% Similarity=0.256 Sum_probs=29.2
Q ss_pred EEEEEEeecccccchHHHHHHHHHHHHHhcCc
Q 014822 382 QMQVNVTADHRVIYGADLASFLQTLAKIIEDP 413 (418)
Q Consensus 382 ~m~lslt~DHRviDG~~aa~Fl~~l~~~le~p 413 (418)
.+.|.|.++|-++||.-+-.|++.|-+.|.++
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~ 208 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSY 208 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTS
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhh
Confidence 36788999999999999999999999999865
No 182
>3csq_A Morphogenesis protein 1; hydrolase, infection, late protein; 1.80A {Bacteriophage phi-29}
Probab=26.80 E-value=21 Score=34.15 Aligned_cols=22 Identities=23% Similarity=0.139 Sum_probs=18.0
Q ss_pred EEEcCCCCeeecCCeEEEEEec
Q 014822 15 SWVRSEGDKLCKGESVVVVESD 36 (418)
Q Consensus 15 ~w~v~~Gd~V~~g~~l~~vet~ 36 (418)
++.|++||.|++||+|+.+-+.
T Consensus 250 ~~~V~~G~~V~~Gq~Ig~~G~t 271 (334)
T 3csq_A 250 PLPFDVGKKLKKGDLMGHTGIG 271 (334)
T ss_dssp SCCCCTTCEECTTSEEEECBCC
T ss_pred cccCCCcCEECCCCEEEeecCC
Confidence 4579999999999999988643
No 183
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=26.51 E-value=43 Score=32.53 Aligned_cols=62 Identities=11% Similarity=0.138 Sum_probs=40.9
Q ss_pred CceeccCCchhHHHHHHhhhcCCcceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhCCcCcccccC
Q 014822 196 LASVVPFTTMQGAVSRNMVESLAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQHPVVNSSCRD 271 (418)
Q Consensus 196 ~~~~~~~s~~r~~ia~~m~~s~~iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~~P~ln~~~~~ 271 (418)
.....|+|.+|+.+...+. ...++|++..-+.+.. .+.. ..+-.|+...+.+||.||.++..
T Consensus 14 ~~~~~pls~~Q~~~~~~~~--~~~~~y~~~~~~~l~g-----------~ld~-~~L~~Al~~lv~rh~~LRt~f~~ 75 (466)
T 2xhg_A 14 IAGNVPLTPIQKWFFGKNF--TNTGHWNQSSVLYRPE-----------GFDP-KVIQSVMDKIIEHHDALRMVYQH 75 (466)
T ss_dssp CCEECCCCHHHHHHHHTTC--TTTTCBEEEEEEEETT-----------CCCH-HHHHHHHHHHHHHSGGGGEEEEC
T ss_pred cCCCCCCCHHHHHHHhCCC--CCcCcceeEEEEEcCC-----------CCCH-HHHHHHHHHHHHhChHhheEEec
Confidence 3456799999984443322 3445666666665532 2333 34667888899999999999864
No 184
>3rh0_A Arsenate reductase; oxidoreductase; 1.72A {Corynebacterium glutamicum}
Probab=26.28 E-value=40 Score=28.11 Aligned_cols=33 Identities=6% Similarity=0.034 Sum_probs=25.3
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAE 176 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~ 176 (418)
.+.|.+.+.++++|||++.-. .-.++.+|+..+
T Consensus 61 ~~dp~a~~vl~e~Gidis~h~----ar~l~~~~~~~~ 93 (148)
T 3rh0_A 61 GLNQLSVESIAEVGADMSQGI----PKAIDPELLRTV 93 (148)
T ss_dssp SCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCcCCCe----eeECCHHHhcCC
Confidence 478999999999999997432 345788887644
No 185
>1qwy_A Peptidoglycan hydrolase; LYTM lysostaphin metalloprotease asparagine switch; 1.30A {Staphylococcus aureus subsp} SCOP: b.84.3.2 PDB: 2b0p_A 2b13_A* 2b44_A
Probab=25.42 E-value=1.8e+02 Score=27.02 Aligned_cols=17 Identities=18% Similarity=0.132 Sum_probs=12.2
Q ss_pred eEEecCCCeEEEEEEec
Q 014822 40 MDVETFYDGYLAKIMVD 56 (418)
Q Consensus 40 ~~i~a~~~G~v~~~~~~ 56 (418)
..|.|+.+|+|..+-..
T Consensus 196 tpV~A~adG~Vv~ag~~ 212 (291)
T 1qwy_A 196 SPVYSLTDGTVVQAGWS 212 (291)
T ss_dssp CEEECSSSEEEEEEEEE
T ss_pred CeEEeCcCeEEEEEEEe
Confidence 46888888888766543
No 186
>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7
Probab=25.30 E-value=14 Score=35.52 Aligned_cols=35 Identities=6% Similarity=-0.186 Sum_probs=24.2
Q ss_pred EcCCCCeeecCCeEEEEEec-----ceeeEEecCCCeEEE
Q 014822 17 VRSEGDKLCKGESVVVVESD-----KADMDVETFYDGYLA 51 (418)
Q Consensus 17 ~v~~Gd~V~~g~~l~~vet~-----K~~~~i~a~~~G~v~ 51 (418)
.++.|+.|++||+|+++-.. ....+|.+|.+|+|.
T Consensus 278 ~~~~g~~V~~G~~La~i~d~~~~~g~~~~~i~aP~~Gvv~ 317 (341)
T 1yw4_A 278 SVENFTLLPDGMLIAEDGAVRYQATGGEERILFPNPAVKP 317 (341)
T ss_dssp TCCBTEECCSSCCCC--------CCSSCCEEESCCTTCCS
T ss_pred cCCCcCEeCCCCEEEEECCCceEeCCCceEEEeCCCCcee
Confidence 35789999999999988543 234569999999874
No 187
>2fek_A Low molecular weight protein-tyrosine- phosphatase WZB; phosphate binding, hydrolase; NMR {Escherichia coli K12}
Probab=24.34 E-value=45 Score=28.31 Aligned_cols=33 Identities=21% Similarity=0.148 Sum_probs=24.9
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAE 176 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~ 176 (418)
.+.|.+.+.++++|||++.-. .-.|+..|+..+
T Consensus 64 ~~~p~a~~vl~e~Gid~s~~~----sr~l~~~~~~~~ 96 (167)
T 2fek_A 64 GADPTAISVAAEHQLSLEGHC----ARQISRRLCRNY 96 (167)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHHHS
T ss_pred CCCHHHHHHHHHcCCCccCCc----CccCCHHHhccC
Confidence 478999999999999997432 345777777643
No 188
>3qoq_A Alginate and motility regulator Z; protein-DNA complex, ribbon-helix-helix; HET: DNA; 3.10A {Pseudomonas aeruginosa}
Probab=24.24 E-value=1.3e+02 Score=21.56 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=29.2
Q ss_pred CCcceEEEEEEEEchHHHHHHHHHhcCCCCHHHHHHHHHHHHHhh
Q 014822 217 LAVPTFRVGYTITTDALDALYKKIKSKGVTMTALLAKATALALVQ 261 (418)
Q Consensus 217 ~~iP~~~~~~~vDvt~l~~~~~~~k~~~~s~~~~~~~Av~~Al~~ 261 (418)
...+.|++-..-++ -.++....+++|.|++.++++++.+++.+
T Consensus 17 r~~~kf~LRlP~eL--~~~L~~~A~~~grSlNaeIv~~Le~sl~~ 59 (69)
T 3qoq_A 17 RTADKFVVRLPEGM--REQIAEVARSHHRSMNSEIIARLEQSLLQ 59 (69)
T ss_dssp TTSEEEEEECCTTH--HHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred ccCCceEEECCHHH--HHHHHHHHHHhCCCHHHHHHHHHHHHHHH
Confidence 45666754444333 23334445566999999999999999975
No 189
>2gi4_A Possible phosphotyrosine protein phosphatase; low molecular weight, protein tyrosine phosphatase, bacterial phosphatase; NMR {Campylobacter jejuni}
Probab=24.09 E-value=31 Score=28.90 Aligned_cols=31 Identities=13% Similarity=0.080 Sum_probs=24.0
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 174 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~ 174 (418)
.+.|.+++.++++|||++... .-.|+.+|+.
T Consensus 50 ~~~~~a~~~l~~~Gid~s~~~----ar~l~~~d~~ 80 (156)
T 2gi4_A 50 GMHYGTKNKLAQLNIEHKNFT----SKKLTQKLCD 80 (156)
T ss_dssp CCCHHHHHHHHHTSCSCCCCC----CCBCCHHHHT
T ss_pred CCCHHHHHHHHHcCCCccCCc----cccCCHHHhc
Confidence 478999999999999997543 3457777774
No 190
>2cwd_A Low molecular weight phosphotyrosine protein PHOS; tyrosine phosphatase, structural genomics; 1.90A {Thermus thermophilus}
Probab=23.83 E-value=44 Score=28.09 Aligned_cols=32 Identities=25% Similarity=0.278 Sum_probs=24.8
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAE 176 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~ 176 (418)
.+.|.+.+.++++|||++ -.. -.|+.+|+..|
T Consensus 53 ~~~p~a~~~l~e~Gid~s-~~a----r~l~~~~~~~~ 84 (161)
T 2cwd_A 53 PMDPRARRVLEEEGAYFP-HVA----RRLTREDVLAY 84 (161)
T ss_dssp CCCHHHHHHHHHHTCCCC-CCC----CBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCcCcc-ccc----cCCCHhHhccC
Confidence 478999999999999997 432 35777777643
No 191
>2kng_A Protein LSR2; DNA-binding domain, immune response, DNA binding protein; NMR {Mycobacterium tuberculosis}
Probab=23.38 E-value=90 Score=21.43 Aligned_cols=32 Identities=28% Similarity=0.304 Sum_probs=27.3
Q ss_pred ChhHHHHHHHcCCCccccccCCCCCccchhhHHHHHHh
Q 014822 142 SPYAKKLANELKVELARVVGSGPKGRIVAKDVEAEAAA 179 (418)
Q Consensus 142 sP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~~~~ 179 (418)
+-.+|.-|+++|++++. .|||..+=+++|-..
T Consensus 15 ~~aIR~WAr~nG~~Vsd------RGRIp~~V~eAY~aA 46 (55)
T 2kng_A 15 SAAIREWARRNGHNVST------RGRIPADVIDAYHAA 46 (55)
T ss_dssp HHHHHHHHHHTTCCCCS------SSCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHcCCcCCC------CCCCCHHHHHHHHHc
Confidence 45899999999999874 599999999998654
No 192
>2wmy_A WZB, putative acid phosphatase WZB; hydrolase; 2.21A {Escherichia coli}
Probab=21.15 E-value=39 Score=28.04 Aligned_cols=31 Identities=13% Similarity=0.022 Sum_probs=23.2
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 174 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~ 174 (418)
.+.|.+.+.++++|||++.-. .-.++..|+.
T Consensus 50 ~~~p~a~~~l~e~Gid~~~~~----ar~l~~~~~~ 80 (150)
T 2wmy_A 50 TADESAIRVAEKNGLCLKGHR----GTKFTSALAR 80 (150)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHT
T ss_pred CCCHHHHHHHHHcCCCccCCc----ccCCCHHHhc
Confidence 478999999999999997432 2346666664
No 193
>2l17_A Synarsc, arsenate reductase; alpha/beta sandwich, oxidoreductase; NMR {Synechocystis} PDB: 2l18_A 2l19_A
Probab=20.90 E-value=32 Score=27.94 Aligned_cols=31 Identities=13% Similarity=0.226 Sum_probs=22.7
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 174 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~ 174 (418)
.+.|.+.+.++++|||++.-. .-.|+..|+.
T Consensus 44 ~~~~~a~~~l~e~Gid~s~~~----sr~l~~~~~~ 74 (134)
T 2l17_A 44 RVHPTAIAMMEEVGIDISGQT----SDPIENFNAD 74 (134)
T ss_dssp SCCHHHHHHHHTTTCCCSSCC----CCCGGGCCGG
T ss_pred CCCHHHHHHHHHcCCCcccCc----cccCChHHhc
Confidence 478999999999999996432 2346666654
No 194
>4etn_A LMPTP, low molecular weight protein-tyrosine-phosphatase; dephosphorylation, hydrolase; 1.10A {Bacillus subtilis} PDB: 4eti_A 1zgg_A
Probab=20.66 E-value=59 Score=28.11 Aligned_cols=32 Identities=22% Similarity=0.212 Sum_probs=25.1
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHHHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVEAE 176 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~~~ 176 (418)
.+.|.+++.++++|||++ -. .-.|+.+|+..|
T Consensus 80 ~~dp~a~~vl~e~Gidis-hr----ar~lt~~d~~~~ 111 (184)
T 4etn_A 80 KATPHAVEALFEKHIALN-HV----SSPLTEELMESA 111 (184)
T ss_dssp BCCHHHHHHHHHTTCCCC-CB----CCBCCHHHHHHC
T ss_pred CCCHHHHHHHHHcCCCch-hc----cCcCCHHHcCCC
Confidence 578999999999999998 33 246788887643
No 195
>1jl3_A Arsenate reductase; alpha-beta fold, PTP-loop, oxidoreductase; 1.60A {Bacillus subtilis} SCOP: c.44.1.1 PDB: 1z2d_A 1z2e_A 2ipa_B
Probab=20.41 E-value=41 Score=27.43 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=23.1
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 174 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~ 174 (418)
.+.|.+.+.++++|||++.-. .-.++..|+.
T Consensus 43 ~~~p~a~~~l~~~Gid~s~~~----sr~l~~~~~~ 73 (139)
T 1jl3_A 43 GLNPNAVKAMKEVGIDISNQT----SDIIDSDILN 73 (139)
T ss_dssp CCCHHHHHHHHHTTCCCTTCC----CCBCCHHHHT
T ss_pred CCCHHHHHHHHHcCCCcccCc----cCcCCHHHhh
Confidence 478999999999999997422 2356676664
No 196
>3a7l_A H-protein, glycine cleavage system H protein; lipoic acid, lipoyl, transport protein; 1.30A {Escherichia coli} PDB: 3a7a_B 3ab9_A* 3a8i_E* 3a8j_E* 3a8k_E*
Probab=20.25 E-value=56 Score=26.53 Aligned_cols=32 Identities=16% Similarity=0.177 Sum_probs=25.6
Q ss_pred ecCCCeEEEEEEe-cCCCccccCceeEEeccCh
Q 014822 43 ETFYDGYLAKIMV-DEGGVASVGSAIALLAESE 74 (418)
Q Consensus 43 ~a~~~G~v~~~~~-~~g~~v~~g~~l~~i~~~~ 74 (418)
..+.-|.|..+.+ ++|+.|..|++|+.|+...
T Consensus 32 a~~~lG~i~~v~lp~vG~~V~~g~~l~~vEs~K 64 (128)
T 3a7l_A 32 AQELLGDMVFVDLPEVGATVSAGDDCAVAESVK 64 (128)
T ss_dssp HHHHHCSEEEEECCCTTCEECTTCEEEEEEESS
T ss_pred HhccCCceEEEEecCCCCEEeCCCEEEEEEecc
Confidence 3455677777776 8999999999999997543
No 197
>1p8a_A Protein tyrosine phosphatase; hydrolase; NMR {Tritrichomonas foetus} SCOP: c.44.1.1
Probab=20.01 E-value=42 Score=27.61 Aligned_cols=31 Identities=13% Similarity=0.223 Sum_probs=23.2
Q ss_pred ccChhHHHHHHHcCCCccccccCCCCCccchhhHH
Q 014822 140 VASPYAKKLANELKVELARVVGSGPKGRIVAKDVE 174 (418)
Q Consensus 140 ~asP~ar~la~e~gidl~~v~gtG~~Gri~~~DV~ 174 (418)
.+.|.+.+.++++|||++... .-.++..|+.
T Consensus 48 ~~~p~a~~~l~e~Gid~s~~~----sr~l~~~~~~ 78 (146)
T 1p8a_A 48 SPDTRSQKVCKSNGVDISKQR----ARQITKADFS 78 (146)
T ss_dssp SCTHHHHHHHHHHSCCCCCCC----CCCCCSHHHH
T ss_pred CCCHHHHHHHHHcCCChhcCe----eccCCHhHhh
Confidence 478999999999999997432 2346666664
Done!