Query 014830
Match_columns 417
No_of_seqs 39 out of 41
Neff 2.9
Searched_HMMs 29240
Date Mon Mar 25 18:35:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/014830.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/014830hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2qip_A Protein of unknown func 98.4 3.4E-07 1.2E-11 79.1 5.7 83 232-315 69-162 (165)
2 1paa_A Yeast transcription fac 97.9 3.6E-06 1.2E-10 50.5 1.3 29 155-183 1-29 (30)
3 2m0d_A Zinc finger and BTB dom 97.8 7.6E-06 2.6E-10 48.5 1.8 28 155-183 2-29 (30)
4 1rim_A E6APC2 peptide; E6-bind 97.7 1.5E-05 5.3E-10 50.3 2.6 30 155-185 1-30 (33)
5 1ard_A Yeast transcription fac 97.7 1.4E-05 4.6E-10 47.4 2.1 28 155-183 1-28 (29)
6 3iuf_A Zinc finger protein UBI 97.7 1.2E-05 4E-10 55.3 2.1 34 153-186 4-37 (48)
7 2epx_A Zinc finger protein 28 97.7 1.4E-05 4.8E-10 53.0 2.2 33 153-185 9-41 (47)
8 2els_A Zinc finger protein 406 97.7 1.5E-05 5.2E-10 50.2 2.2 30 153-183 6-35 (36)
9 2elx_A Zinc finger protein 406 97.7 1.7E-05 5.9E-10 49.2 2.2 31 153-184 4-34 (35)
10 2elr_A Zinc finger protein 406 97.7 2.3E-05 8E-10 49.0 2.8 30 153-183 6-35 (36)
11 2elt_A Zinc finger protein 406 97.7 1.9E-05 6.6E-10 49.4 2.4 30 153-183 6-35 (36)
12 1rik_A E6APC1 peptide; E6-bind 97.7 1.6E-05 5.3E-10 47.3 1.8 28 155-183 1-28 (29)
13 2m0e_A Zinc finger and BTB dom 97.7 1.9E-05 6.5E-10 46.4 2.1 28 155-183 1-28 (29)
14 2elv_A Zinc finger protein 406 97.6 1.9E-05 6.4E-10 49.8 2.1 30 153-183 6-35 (36)
15 2m0f_A Zinc finger and BTB dom 97.6 2.3E-05 7.8E-10 46.2 2.2 28 155-183 1-28 (29)
16 2lvt_A Zinc finger and BTB dom 96.8 8.4E-06 2.9E-10 48.9 0.0 29 155-184 1-29 (29)
17 1srk_A Zinc finger protein ZFP 97.6 2.7E-05 9.1E-10 48.7 2.3 31 153-184 4-34 (35)
18 2elp_A Zinc finger protein 406 97.6 2.9E-05 1E-09 49.2 2.4 30 153-183 6-36 (37)
19 1znf_A 31ST zinc finger from X 97.6 2.5E-05 8.7E-10 45.8 1.8 25 156-181 1-25 (27)
20 2elq_A Zinc finger protein 406 97.6 3.4E-05 1.2E-09 48.6 2.5 30 153-183 6-35 (36)
21 2ep3_A Zinc finger protein 484 97.6 3.8E-05 1.3E-09 51.0 2.8 31 153-184 9-39 (46)
22 2yto_A Zinc finger protein 484 97.6 3.9E-05 1.3E-09 51.1 2.7 32 153-185 9-40 (46)
23 1njq_A Superman protein; zinc- 97.6 2.7E-05 9.3E-10 50.2 1.9 31 153-184 3-33 (39)
24 2eps_A POZ-, at HOOK-, and zin 97.5 2.6E-05 9.1E-10 54.2 1.9 34 153-186 9-42 (54)
25 2lvr_A Zinc finger and BTB dom 96.7 1.2E-05 3.9E-10 48.1 0.0 28 155-183 2-29 (30)
26 2emk_A Zinc finger protein 28 97.5 5.3E-05 1.8E-09 50.4 3.2 31 153-184 9-39 (46)
27 2elo_A Zinc finger protein 406 97.5 2.9E-05 9.9E-10 49.0 1.8 31 153-184 6-36 (37)
28 2en2_A B-cell lymphoma 6 prote 97.5 3.2E-05 1.1E-09 50.3 1.9 31 153-184 8-38 (42)
29 2kvh_A Zinc finger and BTB dom 97.5 5.3E-05 1.8E-09 44.9 2.7 23 155-177 2-24 (27)
30 1p7a_A BF3, BKLF, kruppel-like 97.5 5.1E-05 1.8E-09 47.9 2.7 28 153-181 8-35 (37)
31 2elm_A Zinc finger protein 406 97.5 3.1E-05 1.1E-09 49.7 1.6 30 153-182 6-35 (37)
32 2eml_A Zinc finger protein 28 97.5 5.7E-05 1.9E-09 50.1 2.8 31 153-184 9-39 (46)
33 2en3_A ZFP-95, zinc finger pro 97.5 5.5E-05 1.9E-09 50.2 2.7 32 153-185 9-40 (46)
34 2yte_A Zinc finger protein 473 97.5 4.9E-05 1.7E-09 49.2 2.4 31 153-184 7-37 (42)
35 2epv_A Zinc finger protein 268 97.5 4.7E-05 1.6E-09 50.4 2.3 31 153-184 9-39 (44)
36 2ema_A Zinc finger protein 347 97.5 6.1E-05 2.1E-09 50.0 2.8 31 153-184 9-39 (46)
37 2emz_A ZFP-95, zinc finger pro 97.5 8.7E-05 3E-09 49.4 3.5 32 153-185 9-40 (46)
38 4gzn_C ZFP-57, zinc finger pro 97.5 4.1E-05 1.4E-09 56.9 2.0 36 155-191 3-38 (60)
39 2epc_A Zinc finger protein 32; 97.5 6.4E-05 2.2E-09 48.6 2.7 31 153-184 8-38 (42)
40 1klr_A Zinc finger Y-chromosom 97.5 5.6E-05 1.9E-09 44.7 2.2 27 155-182 1-27 (30)
41 2emg_A Zinc finger protein 484 97.4 4.7E-05 1.6E-09 50.5 1.9 31 153-184 9-39 (46)
42 2eoo_A ZFP-95, zinc finger pro 97.4 7.8E-05 2.7E-09 49.6 2.9 31 153-184 9-39 (46)
43 2ep1_A Zinc finger protein 484 97.4 6.2E-05 2.1E-09 49.8 2.4 31 153-184 9-39 (46)
44 2kvg_A Zinc finger and BTB dom 97.4 4.9E-05 1.7E-09 45.5 1.7 23 155-177 2-24 (27)
45 2en7_A Zinc finger protein 268 97.4 5.2E-05 1.8E-09 49.6 1.9 31 153-184 9-39 (44)
46 2lv2_A Insulinoma-associated p 97.4 4.3E-05 1.5E-09 60.3 1.8 30 154-183 54-83 (85)
47 2enf_A Zinc finger protein 347 97.4 6.9E-05 2.3E-09 49.7 2.5 31 153-184 9-39 (46)
48 2eoz_A Zinc finger protein 473 97.4 4.9E-05 1.7E-09 50.6 1.8 31 153-184 9-39 (46)
49 2emj_A Zinc finger protein 28 97.4 8.5E-05 2.9E-09 49.4 3.0 31 153-184 9-39 (46)
50 2kvf_A Zinc finger and BTB dom 97.4 7.3E-05 2.5E-09 44.3 2.4 23 155-177 2-24 (28)
51 2eq1_A Zinc finger protein 347 97.4 6.3E-05 2.2E-09 49.9 2.3 31 153-184 9-39 (46)
52 2epz_A Zinc finger protein 28 97.4 6.1E-05 2.1E-09 50.0 2.2 31 153-184 9-39 (46)
53 2eow_A Zinc finger protein 347 97.4 5.8E-05 2E-09 49.9 2.1 31 153-184 9-39 (46)
54 2enh_A Zinc finger protein 28 97.4 4.7E-05 1.6E-09 50.7 1.7 31 153-184 9-39 (46)
55 2emh_A Zinc finger protein 484 97.4 8.5E-05 2.9E-09 49.3 2.9 31 153-184 9-39 (46)
56 2eos_A B-cell lymphoma 6 prote 97.4 4.5E-05 1.5E-09 49.7 1.5 31 153-184 8-38 (42)
57 2ytm_A Zinc finger protein 28 97.4 7.5E-05 2.6E-09 49.9 2.6 31 153-184 9-39 (46)
58 2emy_A Zinc finger protein 268 97.4 8.8E-05 3E-09 49.2 2.9 31 153-184 9-39 (46)
59 2em3_A Zinc finger protein 28 97.4 7.9E-05 2.7E-09 49.4 2.6 31 153-184 9-39 (46)
60 2en8_A Zinc finger protein 224 97.4 7.2E-05 2.5E-09 49.5 2.4 31 153-184 9-39 (46)
61 2ytk_A Zinc finger protein 347 97.4 6.8E-05 2.3E-09 49.7 2.3 31 153-184 9-39 (46)
62 2elz_A Zinc finger protein 224 97.4 6.9E-05 2.4E-09 49.9 2.3 31 153-184 9-39 (46)
63 1zfd_A SWI5; DNA binding motif 97.4 7.2E-05 2.5E-09 45.8 2.2 28 155-183 2-31 (32)
64 4gzn_C ZFP-57, zinc finger pro 97.4 5E-05 1.7E-09 56.5 1.7 32 153-185 29-60 (60)
65 2lvu_A Zinc finger and BTB dom 96.5 2.5E-05 8.4E-10 46.0 0.0 24 155-178 1-24 (26)
66 2eoh_A Zinc finger protein 28 97.4 7.6E-05 2.6E-09 49.7 2.4 32 153-185 9-40 (46)
67 2ytt_A Zinc finger protein 473 97.4 8.5E-05 2.9E-09 49.4 2.6 31 153-184 9-39 (46)
68 1yui_A GAGA-factor; complex (D 97.4 7.6E-05 2.6E-09 51.7 2.4 31 153-184 21-51 (54)
69 2ytp_A Zinc finger protein 484 97.4 5.7E-05 1.9E-09 50.3 1.7 31 153-184 9-39 (46)
70 2ely_A Zinc finger protein 224 97.4 8E-05 2.7E-09 49.6 2.4 31 153-184 9-39 (46)
71 2eom_A ZFP-95, zinc finger pro 97.4 8.1E-05 2.8E-09 49.7 2.4 31 153-184 9-39 (46)
72 2eof_A Zinc finger protein 268 97.4 9.2E-05 3.2E-09 48.3 2.7 31 153-184 9-39 (44)
73 2eor_A Zinc finger protein 224 97.4 8.7E-05 3E-09 49.1 2.5 31 153-184 9-39 (46)
74 2yu5_A Zinc finger protein 473 97.4 7.2E-05 2.5E-09 49.2 2.0 31 153-184 9-39 (44)
75 2ep2_A Zinc finger protein 484 97.4 7E-05 2.4E-09 49.7 2.0 31 153-184 9-39 (46)
76 2emi_A Zinc finger protein 484 97.4 7E-05 2.4E-09 49.7 2.0 31 153-184 9-39 (46)
77 2en9_A Zinc finger protein 28 97.3 9.3E-05 3.2E-09 49.2 2.5 31 153-184 9-39 (46)
78 2ept_A Zinc finger protein 32; 97.3 6.9E-05 2.4E-09 48.6 1.9 31 153-184 7-37 (41)
79 2emx_A Zinc finger protein 268 97.3 8.9E-05 3E-09 48.7 2.4 31 153-184 7-37 (44)
80 2yth_A Zinc finger protein 224 97.3 9.6E-05 3.3E-09 49.2 2.6 31 153-184 9-39 (46)
81 2yti_A Zinc finger protein 347 97.3 6.5E-05 2.2E-09 49.9 1.7 32 153-185 9-40 (46)
82 2em0_A Zinc finger protein 224 97.3 7.3E-05 2.5E-09 49.6 2.0 31 153-184 9-39 (46)
83 2em6_A Zinc finger protein 224 97.3 0.0001 3.4E-09 49.1 2.7 32 153-185 9-40 (46)
84 2eon_A ZFP-95, zinc finger pro 97.3 6.2E-05 2.1E-09 50.3 1.6 31 153-184 9-39 (46)
85 2eov_A Zinc finger protein 484 97.3 0.0001 3.6E-09 48.7 2.7 31 153-184 9-39 (46)
86 2eou_A Zinc finger protein 473 97.3 0.00011 3.8E-09 48.4 2.7 31 153-184 9-39 (44)
87 2el5_A Zinc finger protein 268 97.3 7.5E-05 2.6E-09 48.5 1.9 31 153-184 7-37 (42)
88 2emf_A Zinc finger protein 484 97.3 6.8E-05 2.3E-09 49.9 1.7 31 153-184 9-39 (46)
89 2yrm_A B-cell lymphoma 6 prote 97.3 0.00013 4.3E-09 48.3 3.0 31 153-184 7-37 (43)
90 2em4_A Zinc finger protein 28 97.3 8.4E-05 2.9E-09 49.5 2.1 31 153-184 9-39 (46)
91 2emb_A Zinc finger protein 473 97.3 6.6E-05 2.3E-09 49.4 1.6 31 153-184 9-39 (44)
92 2ytn_A Zinc finger protein 347 97.3 9E-05 3.1E-09 49.2 2.2 31 153-184 9-39 (46)
93 2em7_A Zinc finger protein 224 97.3 0.00013 4.3E-09 48.4 2.9 32 153-185 9-40 (46)
94 2ytj_A Zinc finger protein 484 97.3 0.00011 3.6E-09 48.8 2.6 31 153-184 9-39 (46)
95 1va1_A Transcription factor SP 97.3 0.00013 4.4E-09 46.8 2.8 30 153-183 5-36 (37)
96 2epw_A Zinc finger protein 268 97.3 8.6E-05 3E-09 49.1 2.1 31 153-184 9-39 (46)
97 2adr_A ADR1; transcription reg 97.3 6.8E-05 2.3E-09 52.0 1.6 31 153-183 27-57 (60)
98 2eop_A Zinc finger protein 268 97.3 9.7E-05 3.3E-09 48.8 2.3 31 153-184 9-39 (46)
99 2eme_A Zinc finger protein 473 97.3 9.6E-05 3.3E-09 48.8 2.3 31 153-184 9-39 (46)
100 2eq4_A Zinc finger protein 224 97.3 0.00012 4.2E-09 48.3 2.8 32 152-184 8-39 (46)
101 2epu_A Zinc finger protein 32; 97.3 5.6E-05 1.9E-09 50.1 1.1 31 153-184 9-39 (45)
102 2em5_A ZFP-95, zinc finger pro 97.3 8.2E-05 2.8E-09 49.5 1.9 31 153-184 9-39 (46)
103 2emm_A ZFP-95, zinc finger pro 97.3 0.00012 4E-09 48.4 2.6 31 153-184 9-39 (46)
104 2d9h_A Zinc finger protein 692 97.3 8.9E-05 3E-09 54.1 2.2 31 154-184 36-66 (78)
105 2emp_A Zinc finger protein 347 97.3 0.00015 5E-09 48.1 3.1 31 153-184 9-39 (46)
106 2em8_A Zinc finger protein 224 97.3 0.00011 3.6E-09 48.9 2.4 31 153-184 9-39 (46)
107 2eoq_A Zinc finger protein 224 97.3 0.00012 3.9E-09 48.6 2.5 31 153-184 9-39 (46)
108 2eq0_A Zinc finger protein 347 97.3 7.3E-05 2.5E-09 49.6 1.5 31 153-184 9-39 (46)
109 2em9_A Zinc finger protein 224 97.3 0.00011 3.6E-09 48.6 2.3 31 153-184 9-39 (46)
110 2yrj_A Zinc finger protein 473 97.3 8.2E-05 2.8E-09 49.2 1.7 31 153-184 9-39 (46)
111 2ytr_A Zinc finger protein 347 97.3 0.0001 3.5E-09 48.7 2.2 31 153-184 9-39 (46)
112 2eoy_A Zinc finger protein 473 97.3 9.9E-05 3.4E-09 49.1 2.1 31 153-184 9-40 (46)
113 2enc_A Zinc finger protein 224 97.3 0.0001 3.6E-09 48.8 2.2 31 153-184 9-39 (46)
114 2ytq_A Zinc finger protein 268 97.3 9.9E-05 3.4E-09 49.1 2.1 31 153-184 9-39 (46)
115 2yts_A Zinc finger protein 484 97.3 8.5E-05 2.9E-09 49.1 1.8 31 153-184 9-39 (46)
116 2eoe_A Zinc finger protein 347 97.3 7.8E-05 2.7E-09 49.3 1.6 31 153-184 9-39 (46)
117 2el6_A Zinc finger protein 268 97.3 0.00011 3.7E-09 48.9 2.2 31 153-184 9-39 (46)
118 2eq2_A Zinc finger protein 347 97.3 9.4E-05 3.2E-09 49.1 1.9 31 153-184 9-39 (46)
119 2ytd_A Zinc finger protein 473 97.3 0.00012 4.1E-09 48.6 2.4 31 153-184 9-39 (46)
120 2yu8_A Zinc finger protein 347 97.3 0.0001 3.6E-09 48.8 2.1 31 153-184 9-39 (46)
121 2ene_A Zinc finger protein 347 97.3 0.0001 3.5E-09 48.9 2.0 31 153-184 9-39 (46)
122 2eq3_A Zinc finger protein 347 97.3 6.8E-05 2.3E-09 49.6 1.1 31 153-184 9-39 (46)
123 2em2_A Zinc finger protein 28 97.3 0.00012 4E-09 48.7 2.3 31 153-184 9-39 (46)
124 2ytb_A Zinc finger protein 32; 97.3 5.8E-05 2E-09 48.9 0.7 31 153-184 8-38 (42)
125 2eoj_A Zinc finger protein 268 97.3 8E-05 2.7E-09 48.8 1.4 31 153-184 9-39 (44)
126 2ep0_A Zinc finger protein 28 97.3 0.0001 3.6E-09 48.8 1.9 31 153-184 9-39 (46)
127 2en6_A Zinc finger protein 268 97.2 9.6E-05 3.3E-09 49.0 1.7 31 153-184 9-39 (46)
128 1sp2_A SP1F2; zinc finger, tra 97.2 9.7E-05 3.3E-09 45.0 1.6 28 155-183 1-30 (31)
129 2eox_A Zinc finger protein 473 97.2 6E-05 2E-09 49.6 0.5 31 153-184 9-39 (44)
130 2epp_A POZ-, at HOOK-, and zin 97.2 0.00021 7.2E-09 54.6 3.5 35 148-183 5-39 (66)
131 2ytf_A Zinc finger protein 268 97.2 0.00013 4.5E-09 48.2 2.1 31 153-184 9-39 (46)
132 2epq_A POZ-, at HOOK-, and zin 97.2 0.00012 4.2E-09 48.4 1.9 32 153-185 7-38 (45)
133 2yso_A ZFP-95, zinc finger pro 97.2 0.00015 5.3E-09 48.0 2.3 31 153-184 9-39 (46)
134 2ysp_A Zinc finger protein 224 97.2 8.1E-05 2.8E-09 49.4 0.9 31 153-184 9-39 (46)
135 2ct1_A Transcriptional repress 97.2 0.00019 6.6E-09 52.3 2.6 31 153-183 12-42 (77)
136 2eln_A Zinc finger protein 406 97.1 0.00022 7.4E-09 48.9 2.6 32 151-183 4-37 (38)
137 2lv2_A Insulinoma-associated p 97.1 0.00015 5.2E-09 57.2 2.0 55 150-206 22-76 (85)
138 1x3c_A Zinc finger protein 292 97.1 0.0002 6.7E-09 57.6 2.7 38 150-187 21-60 (73)
139 2el4_A Zinc finger protein 268 97.1 0.00018 6.2E-09 47.5 2.0 31 153-184 9-39 (46)
140 1x5w_A Zinc finger protein 64, 97.1 0.00014 4.9E-09 52.2 1.5 31 154-185 7-37 (70)
141 2kfq_A FP1; protein, de novo p 97.1 1.2E-05 4E-10 50.4 -3.8 29 155-184 1-29 (32)
142 1bhi_A CRE-BP1, ATF-2; CRE bin 97.1 0.00027 9.3E-09 44.9 2.6 30 154-184 4-35 (38)
143 2en1_A Zinc finger protein 224 97.1 0.00015 5E-09 48.1 1.3 31 153-184 9-39 (46)
144 2yt9_A Zinc finger-containing 97.1 0.00022 7.6E-09 53.1 2.4 29 155-183 64-92 (95)
145 3uk3_C Zinc finger protein 217 97.1 0.0003 1E-08 48.0 2.9 27 154-180 30-56 (57)
146 2drp_A Protein (tramtrack DNA- 97.1 0.00033 1.1E-08 49.4 3.0 28 154-181 38-65 (66)
147 3uk3_C Zinc finger protein 217 97.0 0.00024 8.1E-09 48.6 2.1 33 154-187 2-34 (57)
148 1fv5_A First zinc finger of U- 97.0 0.00032 1.1E-08 47.9 2.7 26 151-176 3-28 (36)
149 2drp_A Protein (tramtrack DNA- 97.0 0.00017 5.7E-09 50.9 1.2 37 154-190 8-45 (66)
150 2ytg_A ZFP-95, zinc finger pro 97.0 0.00015 5.3E-09 48.0 1.0 31 153-184 9-39 (46)
151 2epr_A POZ-, at HOOK-, and zin 97.0 0.00019 6.3E-09 48.5 1.4 32 152-184 8-39 (48)
152 2ct1_A Transcriptional repress 97.0 0.00021 7.3E-09 52.1 1.5 30 155-184 44-73 (77)
153 1a1h_A QGSR zinc finger peptid 96.9 0.00048 1.7E-08 50.6 2.7 28 155-183 61-88 (90)
154 2adr_A ADR1; transcription reg 96.9 0.00039 1.3E-08 48.1 2.1 49 155-205 1-49 (60)
155 2dlq_A GLI-kruppel family memb 96.9 0.00036 1.2E-08 53.9 2.0 31 153-183 91-121 (124)
156 2lce_A B-cell lymphoma 6 prote 96.9 0.00044 1.5E-08 50.1 2.3 51 153-205 14-64 (74)
157 1x6f_A Zinc finger protein 462 96.9 0.00079 2.7E-08 52.9 3.9 39 152-191 21-59 (88)
158 1x6e_A Zinc finger protein 24; 96.8 0.00048 1.6E-08 49.8 2.3 32 153-185 11-42 (72)
159 2lce_A B-cell lymphoma 6 prote 96.8 0.00046 1.6E-08 50.0 2.1 31 153-184 42-72 (74)
160 1x6e_A Zinc finger protein 24; 96.7 0.00074 2.5E-08 48.8 2.7 30 153-183 39-68 (72)
161 2gqj_A Zinc finger protein KIA 96.7 0.0015 5E-08 50.4 4.4 52 153-206 21-74 (98)
162 1bbo_A Human enhancer-binding 96.7 0.00054 1.8E-08 46.8 1.7 24 154-177 27-50 (57)
163 2ctd_A Zinc finger protein 512 96.7 0.00066 2.3E-08 53.4 2.3 28 155-182 61-88 (96)
164 1wjp_A Zinc finger protein 295 96.7 0.00034 1.2E-08 53.9 0.6 29 155-183 68-96 (107)
165 1ncs_A Peptide M30F, transcrip 96.6 0.00057 2E-08 46.3 1.3 30 153-183 15-46 (47)
166 2ab3_A ZNF29; zinc finger prot 96.6 0.00086 2.9E-08 39.4 1.9 24 155-178 1-26 (29)
167 1x5w_A Zinc finger protein 64, 96.6 0.0012 4.2E-08 47.2 3.0 29 153-181 34-62 (70)
168 2cot_A Zinc finger protein 435 96.5 0.00075 2.6E-08 49.2 1.5 27 155-182 45-71 (77)
169 2dmi_A Teashirt homolog 3; zin 96.5 0.0015 5.2E-08 50.5 3.1 31 153-183 77-107 (115)
170 1x6h_A Transcriptional repress 96.5 0.0019 6.6E-08 47.0 3.4 31 153-183 12-42 (86)
171 2ghf_A ZHX1, zinc fingers and 96.5 0.00069 2.4E-08 55.1 1.0 32 154-185 48-79 (102)
172 1f2i_G Fusion of N-terminal 17 96.4 0.0014 4.6E-08 47.0 2.4 24 154-177 47-70 (73)
173 1bbo_A Human enhancer-binding 96.4 0.0014 4.8E-08 44.7 2.3 27 156-182 1-27 (57)
174 2d9h_A Zinc finger protein 692 96.4 0.0015 5.3E-08 47.5 2.5 52 153-206 4-58 (78)
175 2cot_A Zinc finger protein 435 96.4 0.00098 3.4E-08 48.5 1.4 52 153-206 15-66 (77)
176 1llm_C Chimera of ZIF23-GCN4; 96.4 0.0015 5E-08 48.8 2.3 27 154-180 29-55 (88)
177 2csh_A Zinc finger protein 297 96.4 0.001 3.5E-08 51.1 1.5 62 154-217 35-96 (110)
178 2csh_A Zinc finger protein 297 96.3 0.0032 1.1E-07 48.3 4.1 35 153-187 62-96 (110)
179 2ee8_A Protein ODD-skipped-rel 96.2 0.0018 6.3E-08 49.2 2.3 29 154-183 71-99 (106)
180 2dmd_A Zinc finger protein 64, 96.2 0.0018 6.1E-08 48.2 2.0 24 154-177 6-29 (96)
181 2gqj_A Zinc finger protein KIA 96.2 0.0018 6.2E-08 49.9 2.1 27 155-181 53-79 (98)
182 2ent_A Krueppel-like factor 15 96.1 0.0017 5.8E-08 42.9 1.4 31 153-184 9-41 (48)
183 2dlk_A Novel protein; ZF-C2H2 96.1 0.0026 9E-08 45.9 2.5 30 154-184 36-67 (79)
184 1f2i_G Fusion of N-terminal 17 96.1 0.0025 8.6E-08 45.6 2.4 39 152-191 15-55 (73)
185 2ghf_A ZHX1, zinc fingers and 96.1 0.0022 7.5E-08 52.1 2.2 52 153-205 15-69 (102)
186 2kmk_A Zinc finger protein GFI 96.1 0.0033 1.1E-07 45.1 2.8 25 154-178 55-79 (82)
187 1x6h_A Transcriptional repress 96.1 0.0033 1.1E-07 45.7 2.7 27 154-180 45-71 (86)
188 1a1h_A QGSR zinc finger peptid 96.0 0.0025 8.4E-08 46.8 2.0 51 154-206 32-82 (90)
189 2ebt_A Krueppel-like factor 5; 96.0 0.0041 1.4E-07 46.4 3.1 26 153-178 72-97 (100)
190 2lt7_A Transcriptional regulat 96.0 0.0014 4.8E-08 54.5 0.6 53 152-206 18-70 (133)
191 2ctd_A Zinc finger protein 512 96.0 0.0022 7.5E-08 50.4 1.6 50 153-205 31-81 (96)
192 1llm_C Chimera of ZIF23-GCN4; 96.0 0.0049 1.7E-07 45.9 3.4 51 154-206 1-51 (88)
193 2wbt_A B-129; zinc finger; 2.7 96.0 0.0028 9.6E-08 50.1 2.2 48 154-205 72-119 (129)
194 2kmk_A Zinc finger protein GFI 95.9 0.0031 1.1E-07 45.3 2.1 30 153-183 26-55 (82)
195 2lt7_A Transcriptional regulat 95.9 0.003 1E-07 52.5 2.3 30 154-183 76-105 (133)
196 2dlk_A Novel protein; ZF-C2H2 95.9 0.0041 1.4E-07 44.8 2.7 53 153-206 4-60 (79)
197 2yt9_A Zinc finger-containing 95.8 0.0034 1.2E-07 46.6 2.0 29 154-183 5-33 (95)
198 1wjp_A Zinc finger protein 295 95.8 0.0053 1.8E-07 47.1 3.2 48 156-206 42-89 (107)
199 2wbt_A B-129; zinc finger; 2.7 95.8 0.0054 1.8E-07 48.4 3.0 28 154-181 98-125 (129)
200 2jp9_A Wilms tumor 1; DNA bind 95.7 0.0048 1.7E-07 47.3 2.6 30 154-184 64-93 (119)
201 2ej4_A Zinc finger protein ZIC 95.6 0.0052 1.8E-07 45.8 2.4 27 157-184 63-89 (95)
202 2dmd_A Zinc finger protein 64, 95.6 0.0047 1.6E-07 45.9 2.1 25 154-178 62-86 (96)
203 3mjh_B Early endosome antigen 95.6 0.0043 1.5E-07 43.4 1.5 30 154-183 3-32 (34)
204 2wbs_A Krueppel-like factor 4; 95.6 0.0056 1.9E-07 44.7 2.2 24 154-177 63-86 (89)
205 2eod_A TNF receptor-associated 95.5 0.0056 1.9E-07 43.6 2.1 25 153-178 7-31 (66)
206 2i13_A AART; DNA binding, zinc 95.5 0.0054 1.9E-07 51.4 2.2 53 153-207 130-182 (190)
207 2dmi_A Teashirt homolog 3; zin 95.4 0.0085 2.9E-07 46.2 3.0 27 152-178 15-41 (115)
208 2dlq_A GLI-kruppel family memb 95.4 0.0063 2.2E-07 46.8 2.2 31 153-184 63-93 (124)
209 2ej4_A Zinc finger protein ZIC 95.0 0.013 4.4E-07 43.6 2.9 31 155-185 24-54 (95)
210 2eod_A TNF receptor-associated 95.0 0.0063 2.2E-07 43.4 1.1 30 152-182 32-62 (66)
211 2epa_A Krueppel-like factor 10 95.0 0.01 3.4E-07 42.5 2.1 34 153-187 14-49 (72)
212 2gli_A Protein (five-finger GL 95.0 0.0057 1.9E-07 49.1 0.8 33 153-185 94-128 (155)
213 1ubd_C Protein (YY1 zinc finge 94.9 0.01 3.6E-07 46.0 2.0 30 154-184 90-121 (124)
214 2j7j_A Transcription factor II 94.8 0.013 4.3E-07 42.2 2.2 25 154-178 29-55 (85)
215 2epa_A Krueppel-like factor 10 94.8 0.011 3.6E-07 42.3 1.8 25 153-177 44-70 (72)
216 2ee8_A Protein ODD-skipped-rel 94.8 0.02 6.8E-07 43.4 3.3 32 153-185 14-45 (106)
217 2i13_A AART; DNA binding, zinc 94.7 0.012 4.1E-07 49.2 2.1 51 154-206 103-153 (190)
218 2jp9_A Wilms tumor 1; DNA bind 94.6 0.022 7.5E-07 43.6 3.2 29 154-183 4-34 (119)
219 2rpc_A Zinc finger protein ZIC 94.5 0.015 5.2E-07 47.0 2.2 33 153-185 22-54 (155)
220 2gli_A Protein (five-finger GL 94.4 0.021 7E-07 45.9 2.7 28 153-180 125-154 (155)
221 1vd4_A Transcription initiatio 94.4 0.0081 2.8E-07 43.0 0.3 33 153-189 11-43 (62)
222 1zr9_A Zinc finger protein 593 94.3 0.016 5.5E-07 50.2 2.0 35 154-188 48-82 (124)
223 2rpc_A Zinc finger protein ZIC 94.3 0.0094 3.2E-07 48.2 0.5 29 154-183 118-148 (155)
224 2j7j_A Transcription factor II 94.1 0.032 1.1E-06 40.0 3.0 27 156-182 1-29 (85)
225 2ebt_A Krueppel-like factor 5; 93.7 0.034 1.2E-06 41.3 2.6 31 153-184 12-44 (100)
226 2wbs_A Krueppel-like factor 4; 93.7 0.03 1E-06 40.8 2.2 32 153-185 32-65 (89)
227 2ctu_A Zinc finger protein 483 93.3 0.001 3.5E-08 46.9 -6.1 30 154-184 37-66 (73)
228 1ubd_C Protein (YY1 zinc finge 92.6 0.056 1.9E-06 41.9 2.4 23 155-177 4-28 (124)
229 1tf6_A Protein (transcription 91.7 0.083 2.8E-06 44.1 2.5 33 152-185 8-42 (190)
230 3sho_A Transcriptional regulat 91.6 0.36 1.2E-05 40.6 6.3 77 229-311 57-137 (187)
231 1tf6_A Protein (transcription 90.9 0.12 4E-06 43.2 2.6 29 153-181 69-99 (190)
232 3h75_A Periplasmic sugar-bindi 90.4 0.6 2E-05 42.3 7.0 70 228-299 25-96 (350)
233 2e72_A POGO transposable eleme 90.3 0.16 5.4E-06 38.4 2.5 23 155-177 11-33 (49)
234 3l6u_A ABC-type sugar transpor 89.9 1.4 4.9E-05 38.2 8.7 71 227-299 28-99 (293)
235 2eps_A POZ-, at HOOK-, and zin 89.8 0.12 4.2E-06 35.4 1.6 17 153-169 38-54 (54)
236 3jy6_A Transcriptional regulat 89.8 0.96 3.3E-05 39.3 7.6 68 227-298 27-94 (276)
237 3ksm_A ABC-type sugar transpor 88.7 1 3.6E-05 38.4 6.9 70 228-299 21-94 (276)
238 3o74_A Fructose transport syst 88.7 0.72 2.5E-05 39.4 5.9 70 227-298 22-91 (272)
239 3etn_A Putative phosphosugar i 88.1 1.1 3.9E-05 39.7 7.0 95 210-311 41-158 (220)
240 3tb6_A Arabinose metabolism tr 87.7 1.7 5.9E-05 37.5 7.7 97 227-328 35-135 (298)
241 3l49_A ABC sugar (ribose) tran 87.7 1.5 5.1E-05 38.0 7.3 95 227-327 25-120 (291)
242 1tjy_A Sugar transport protein 87.4 1.6 5.4E-05 39.3 7.5 97 227-327 23-122 (316)
243 2d9k_A FLN29 gene product; zin 87.1 0.46 1.6E-05 35.6 3.3 42 147-191 8-49 (75)
244 8abp_A L-arabinose-binding pro 87.1 2.4 8.1E-05 37.0 8.3 67 228-297 23-90 (306)
245 3m9w_A D-xylose-binding peripl 87.0 1.8 6E-05 38.3 7.5 96 227-326 22-118 (313)
246 2fn9_A Ribose ABC transporter, 86.9 1.9 6.7E-05 37.4 7.6 70 227-298 22-92 (290)
247 2ioy_A Periplasmic sugar-bindi 86.5 2 6.8E-05 37.5 7.5 70 227-298 21-91 (283)
248 3g1w_A Sugar ABC transporter; 86.5 3 0.0001 36.5 8.6 97 227-327 24-122 (305)
249 3uug_A Multiple sugar-binding 86.3 1.8 6.1E-05 38.3 7.2 98 227-327 23-121 (330)
250 2dri_A D-ribose-binding protei 86.3 1.9 6.4E-05 37.4 7.2 70 227-298 21-91 (271)
251 1gud_A ALBP, D-allose-binding 85.0 1.9 6.3E-05 37.9 6.6 70 227-298 21-93 (288)
252 2fep_A Catabolite control prot 84.8 2.8 9.6E-05 36.8 7.7 69 227-298 36-104 (289)
253 2rgy_A Transcriptional regulat 84.6 2.3 7.9E-05 37.2 7.0 69 227-298 28-99 (290)
254 3dbi_A Sugar-binding transcrip 84.5 3 0.0001 37.5 7.8 70 227-298 83-152 (338)
255 3rot_A ABC sugar transporter, 84.5 2.9 9.9E-05 36.8 7.6 71 227-299 23-96 (297)
256 2d9k_A FLN29 gene product; zin 84.5 0.11 3.7E-06 39.1 -1.3 31 151-183 38-68 (75)
257 3k4h_A Putative transcriptiona 84.1 2.6 8.9E-05 36.5 7.1 70 227-299 33-102 (292)
258 3brq_A HTH-type transcriptiona 83.9 4.5 0.00015 34.8 8.4 69 227-298 41-110 (296)
259 2fvy_A D-galactose-binding per 83.9 2.9 9.9E-05 36.4 7.2 70 227-298 22-93 (309)
260 2vk2_A YTFQ, ABC transporter p 83.7 2.4 8.2E-05 37.4 6.7 70 227-298 22-92 (306)
261 3d8u_A PURR transcriptional re 83.5 2.5 8.5E-05 36.3 6.6 69 227-298 23-91 (275)
262 1vd4_A Transcription initiatio 83.2 0.2 6.8E-06 35.6 -0.4 20 153-172 36-55 (62)
263 2yva_A DNAA initiator-associat 83.0 2.8 9.7E-05 35.5 6.7 46 266-311 110-162 (196)
264 1jx6_A LUXP protein; protein-l 82.4 3 0.0001 37.4 6.9 69 228-298 65-137 (342)
265 2ctu_A Zinc finger protein 483 82.1 0.27 9.1E-06 34.2 -0.0 23 152-174 14-36 (73)
266 2h3h_A Sugar ABC transporter, 82.1 4.5 0.00015 35.8 7.9 69 228-298 21-91 (313)
267 2l69_A Rossmann 2X3 fold prote 81.7 4.6 0.00016 34.8 7.5 60 230-294 19-80 (134)
268 3huu_A Transcription regulator 81.2 3.5 0.00012 36.3 6.9 69 227-298 47-115 (305)
269 1m3s_A Hypothetical protein YC 80.9 2.1 7.2E-05 36.0 5.1 69 229-310 55-128 (186)
270 3e3m_A Transcriptional regulat 80.6 6.4 0.00022 35.8 8.5 97 227-329 90-186 (355)
271 3egc_A Putative ribose operon 80.3 1.9 6.5E-05 37.6 4.7 70 227-299 28-97 (291)
272 3hcw_A Maltose operon transcri 80.0 4.3 0.00015 35.7 7.0 70 227-299 32-101 (295)
273 3brs_A Periplasmic binding pro 79.9 2.4 8.2E-05 36.7 5.2 69 228-298 28-99 (289)
274 3kjx_A Transcriptional regulat 79.2 5.2 0.00018 36.1 7.4 69 228-299 89-157 (344)
275 3d02_A Putative LACI-type tran 79.2 6.8 0.00023 34.1 7.9 70 227-298 24-95 (303)
276 3gbv_A Putative LACI-family tr 79.0 8.3 0.00028 33.3 8.4 97 227-327 29-130 (304)
277 1pea_A Amidase operon; gene re 78.9 1.7 5.8E-05 39.7 4.1 66 230-297 161-232 (385)
278 3e61_A Putative transcriptiona 78.6 2.5 8.4E-05 36.5 4.9 93 227-329 28-121 (277)
279 3c3k_A Alanine racemase; struc 78.5 5.2 0.00018 34.9 7.0 68 227-298 28-95 (285)
280 2jsp_A Transcriptional regulat 78.4 0.97 3.3E-05 37.3 2.1 23 155-180 20-42 (87)
281 2xhz_A KDSD, YRBH, arabinose 5 78.0 2.7 9.2E-05 35.1 4.8 75 229-311 67-146 (183)
282 2xbl_A Phosphoheptose isomeras 77.8 2 7E-05 36.2 4.1 46 265-310 116-165 (198)
283 2iks_A DNA-binding transcripti 77.8 2.6 8.8E-05 36.9 4.8 70 227-298 40-109 (293)
284 3kke_A LACI family transcripti 77.6 4.8 0.00016 35.6 6.6 70 227-299 35-104 (303)
285 3h5o_A Transcriptional regulat 77.6 6.1 0.00021 35.6 7.4 96 227-329 82-177 (339)
286 2x7x_A Sensor protein; transfe 77.6 5.7 0.0002 35.5 7.1 69 228-298 26-96 (325)
287 1jeo_A MJ1247, hypothetical pr 77.6 4.4 0.00015 33.8 6.0 69 229-311 58-131 (180)
288 2rjo_A Twin-arginine transloca 77.6 3.7 0.00013 36.8 5.9 70 227-298 25-97 (332)
289 2elu_A Zinc finger protein 406 77.1 1.1 3.8E-05 31.7 1.8 25 157-181 10-34 (37)
290 1x92_A APC5045, phosphoheptose 76.7 1.7 5.9E-05 37.0 3.3 46 266-311 114-166 (199)
291 1tk9_A Phosphoheptose isomeras 76.7 1.5 5.2E-05 36.7 2.9 45 266-310 111-159 (188)
292 2o20_A Catabolite control prot 76.2 7.2 0.00025 35.0 7.4 68 228-298 84-151 (332)
293 3bbl_A Regulatory protein of L 76.0 3.5 0.00012 36.1 5.1 69 227-298 28-96 (287)
294 2i2w_A Phosphoheptose isomeras 75.6 2.7 9.2E-05 36.6 4.3 78 233-311 92-181 (212)
295 3trj_A Phosphoheptose isomeras 75.5 3.1 0.00011 36.5 4.7 47 265-311 114-167 (201)
296 1zw8_A Zinc-responsive transcr 75.1 2 6.9E-05 32.0 2.9 26 155-180 37-64 (64)
297 3sp4_A Aprataxin-like protein; 75.0 1.6 5.4E-05 40.5 2.8 25 154-178 167-192 (204)
298 3bil_A Probable LACI-family tr 75.0 6.2 0.00021 36.0 6.7 68 228-298 87-154 (348)
299 3k9c_A Transcriptional regulat 74.7 4.9 0.00017 35.2 5.8 67 227-298 31-97 (289)
300 3clk_A Transcription regulator 74.7 2.9 9.9E-05 36.5 4.3 69 227-298 28-97 (290)
301 1dbq_A Purine repressor; trans 74.3 11 0.00037 32.5 7.8 69 227-298 27-96 (289)
302 3o1i_D Periplasmic protein TOR 74.1 2.9 9.8E-05 36.3 4.1 69 227-298 25-96 (304)
303 1zu1_A DSRBP-ZFA, RNA binding 73.8 2 6.7E-05 36.1 2.9 36 152-187 89-124 (127)
304 3lkb_A Probable branched-chain 73.3 1.9 6.7E-05 39.2 2.9 67 229-297 163-230 (392)
305 2djr_A Zinc finger BED domain- 73.1 2.3 7.9E-05 33.9 3.0 32 155-186 27-65 (76)
306 3td9_A Branched chain amino ac 72.8 1.7 5.9E-05 39.0 2.5 68 228-297 169-236 (366)
307 2hsg_A Glucose-resistance amyl 72.4 6.8 0.00023 35.1 6.2 69 227-298 80-148 (332)
308 3eaf_A ABC transporter, substr 72.2 3 0.0001 38.2 3.9 67 229-297 162-231 (391)
309 1usg_A Leucine-specific bindin 71.3 3.4 0.00012 36.4 3.9 41 257-297 185-225 (346)
310 3p6l_A Sugar phosphate isomera 71.1 5.6 0.00019 34.7 5.2 67 230-297 69-135 (262)
311 3o9x_A Uncharacterized HTH-typ 71.0 10 0.00034 30.6 6.4 54 155-208 35-96 (133)
312 3qk7_A Transcriptional regulat 70.8 5.2 0.00018 35.2 5.0 68 227-298 30-97 (294)
313 2jvx_A NF-kappa-B essential mo 70.4 3 0.0001 28.0 2.6 24 155-178 2-25 (28)
314 3i09_A Periplasmic branched-ch 69.9 2.6 8.9E-05 38.1 2.9 68 229-298 160-230 (375)
315 3sg0_A Extracellular ligand-bi 68.8 2.8 9.5E-05 37.5 2.9 66 228-297 178-246 (386)
316 3hut_A Putative branched-chain 68.8 1.8 6.2E-05 38.6 1.7 40 258-297 187-226 (358)
317 3ipc_A ABC transporter, substr 68.4 3.2 0.00011 37.0 3.1 40 258-297 186-225 (356)
318 1vim_A Hypothetical protein AF 68.3 3.6 0.00012 35.6 3.4 71 229-311 65-139 (200)
319 3fxa_A SIS domain protein; str 68.0 2.6 8.7E-05 36.1 2.4 95 211-312 32-143 (201)
320 2ct5_A Zinc finger BED domain 67.3 2.6 9E-05 33.3 2.1 32 155-186 28-62 (73)
321 3gv0_A Transcriptional regulat 67.2 11 0.00038 32.9 6.3 68 227-298 30-98 (288)
322 2e4u_A Metabotropic glutamate 67.1 7.8 0.00027 38.1 5.9 66 230-297 207-276 (555)
323 3saj_A Glutamate receptor 1; r 65.9 8.9 0.0003 35.3 5.7 66 231-297 149-218 (384)
324 3ic5_A Putative saccharopine d 65.9 12 0.0004 28.1 5.4 70 227-297 18-101 (118)
325 4evq_A Putative ABC transporte 65.2 4.3 0.00015 36.3 3.4 66 228-297 170-238 (375)
326 2qip_A Protein of unknown func 64.7 3 0.0001 35.7 2.2 42 79-123 10-58 (165)
327 3o21_A Glutamate receptor 3; p 63.7 10 0.00036 35.3 5.8 62 231-292 151-212 (389)
328 2fqx_A Membrane lipoprotein TM 63.7 20 0.00069 32.7 7.6 65 228-297 28-94 (318)
329 2l82_A Designed protein OR32; 63.5 13 0.00045 32.8 6.0 63 232-298 47-112 (162)
330 3sm9_A Mglur3, metabotropic gl 63.5 11 0.00039 36.6 6.2 67 229-297 205-275 (479)
331 3snr_A Extracellular ligand-bi 63.4 3.5 0.00012 36.4 2.3 65 229-297 155-222 (362)
332 3ewi_A N-acylneuraminate cytid 63.2 8.9 0.0003 32.9 4.8 65 231-303 46-113 (168)
333 3hs3_A Ribose operon repressor 63.2 3.7 0.00013 35.8 2.4 88 227-326 30-119 (277)
334 1j5x_A Glucosamine-6-phosphate 62.4 6.1 0.00021 37.3 4.0 76 229-311 70-150 (342)
335 3lop_A Substrate binding perip 61.6 2.7 9.1E-05 37.9 1.3 41 258-298 189-229 (364)
336 3mmz_A Putative HAD family hyd 61.5 14 0.00047 30.9 5.6 74 229-311 47-126 (176)
337 3kbb_A Phosphorylated carbohyd 61.5 27 0.00092 28.6 7.3 34 216-249 78-112 (216)
338 3e8m_A Acylneuraminate cytidyl 61.2 21 0.00072 28.6 6.5 75 229-311 39-119 (164)
339 2h0a_A TTHA0807, transcription 61.2 3.1 0.00011 35.7 1.6 69 227-298 19-87 (276)
340 3miz_A Putative transcriptiona 61.1 3.5 0.00012 36.2 2.0 95 228-328 35-129 (301)
341 3cvj_A Putative phosphoheptose 60.5 4.8 0.00017 35.7 2.8 46 266-311 109-169 (243)
342 3n0w_A ABC branched chain amin 60.1 3.7 0.00013 37.3 2.0 67 229-297 162-232 (379)
343 2hqb_A Transcriptional activat 60.0 14 0.0005 33.2 5.9 66 228-297 28-95 (296)
344 4eyg_A Twin-arginine transloca 59.6 5.3 0.00018 35.7 2.9 65 229-297 159-229 (368)
345 1y81_A Conserved hypothetical 59.2 15 0.00051 30.7 5.4 39 258-299 86-124 (138)
346 1dp4_A Atrial natriuretic pept 58.5 11 0.00036 34.9 4.8 60 230-292 172-233 (435)
347 2wm8_A MDP-1, magnesium-depend 58.5 36 0.0012 28.1 7.6 17 231-247 78-94 (187)
348 1qpz_A PURA, protein (purine n 58.0 26 0.00089 31.5 7.2 69 227-298 78-147 (340)
349 3g68_A Putative phosphosugar i 58.0 12 0.0004 35.8 5.1 75 230-311 53-132 (352)
350 3knz_A Putative sugar binding 57.5 12 0.0004 36.2 5.1 73 231-311 70-147 (366)
351 4f11_A Gamma-aminobutyric acid 56.8 7.1 0.00024 36.2 3.3 64 230-297 175-241 (433)
352 4ex6_A ALNB; modified rossman 56.6 35 0.0012 28.1 7.2 83 222-308 104-198 (237)
353 2yrk_A Zinc finger homeobox pr 56.2 5.2 0.00018 30.8 1.9 24 153-176 9-33 (55)
354 3ddh_A Putative haloacid dehal 55.7 19 0.00067 28.9 5.4 73 228-304 112-190 (234)
355 3lmz_A Putative sugar isomeras 55.7 21 0.00071 31.1 5.9 62 230-291 67-128 (257)
356 2aml_A SIS domain protein; 469 54.9 13 0.00044 35.7 4.8 74 230-311 69-148 (373)
357 3ax1_A Serrate RNA effector mo 54.7 5.6 0.00019 39.8 2.4 27 156-182 304-332 (358)
358 3i45_A Twin-arginine transloca 54.7 14 0.00047 33.6 4.8 67 229-297 162-233 (387)
359 3m9l_A Hydrolase, haloacid deh 54.6 26 0.00087 28.6 6.0 45 263-310 141-185 (205)
360 1fu9_A U-shaped transcriptiona 54.6 9 0.00031 27.3 2.8 29 149-177 1-29 (36)
361 3hba_A Putative phosphosugar i 54.2 15 0.00051 35.0 5.1 76 230-312 61-141 (334)
362 2zj3_A Glucosamine--fructose-6 54.1 8.8 0.0003 36.8 3.6 46 266-311 108-157 (375)
363 3n07_A 3-deoxy-D-manno-octulos 54.0 23 0.0008 30.7 6.0 71 231-309 62-138 (195)
364 4gib_A Beta-phosphoglucomutase 53.5 1.1E+02 0.0037 26.3 11.6 17 282-298 200-216 (250)
365 1nri_A Hypothetical protein HI 53.3 8.5 0.00029 36.0 3.3 48 265-312 140-191 (306)
366 1jye_A Lactose operon represso 52.7 33 0.0011 31.1 7.0 70 228-298 82-151 (349)
367 2zg6_A Putative uncharacterize 52.7 29 0.001 28.9 6.2 77 228-308 102-186 (220)
368 2hoq_A Putative HAD-hydrolase 52.1 22 0.00076 29.8 5.4 74 228-308 101-189 (241)
369 3eua_A Putative fructose-amino 51.7 10 0.00036 35.6 3.6 75 229-311 43-124 (329)
370 3pwf_A Rubrerythrin; non heme 51.5 5.8 0.0002 35.2 1.7 27 140-166 122-148 (170)
371 2a3n_A Putative glucosamine-fr 51.4 12 0.0004 35.5 3.9 95 209-311 38-152 (355)
372 2d59_A Hypothetical protein PH 50.9 21 0.00071 29.8 5.0 42 255-299 91-132 (144)
373 2yj3_A Copper-transporting ATP 56.2 3.3 0.00011 37.1 0.0 79 228-313 143-224 (263)
374 3llv_A Exopolyphosphatase-rela 50.3 15 0.0005 29.2 3.8 72 226-297 18-103 (141)
375 4eze_A Haloacid dehalogenase-l 50.3 28 0.00095 32.5 6.2 85 221-312 178-287 (317)
376 3iyl_X VP3; non-enveloped viru 49.4 3.5 0.00012 46.3 0.0 28 155-182 115-142 (1214)
377 3m2p_A UDP-N-acetylglucosamine 49.2 9.5 0.00033 33.9 2.8 75 226-302 15-113 (311)
378 3c85_A Putative glutathione-re 49.1 11 0.00037 31.4 3.0 63 227-289 52-130 (183)
379 3ib6_A Uncharacterized protein 48.9 68 0.0023 26.5 7.8 32 262-297 110-143 (189)
380 3hgm_A Universal stress protei 48.7 69 0.0024 24.7 7.4 49 250-299 68-120 (147)
381 3iru_A Phoshonoacetaldehyde hy 48.5 28 0.00096 29.2 5.4 79 221-302 110-199 (277)
382 3fkj_A Putative phosphosugar i 48.5 12 0.00042 35.6 3.6 74 229-310 58-138 (347)
383 3ib6_A Uncharacterized protein 48.4 54 0.0019 27.2 7.1 72 228-302 41-128 (189)
384 3skx_A Copper-exporting P-type 48.2 33 0.0011 29.2 5.9 76 229-312 152-230 (280)
385 3l8h_A Putative haloacid dehal 48.1 70 0.0024 25.7 7.6 75 228-302 34-131 (179)
386 2poc_A D-fructose-6- PH, isome 47.5 13 0.00044 35.5 3.5 45 267-311 99-147 (367)
387 2r8e_A 3-deoxy-D-manno-octulos 46.8 58 0.002 27.2 7.1 77 229-312 61-142 (188)
388 2hi0_A Putative phosphoglycola 46.6 10 0.00035 32.1 2.5 68 230-302 119-195 (240)
389 1tq8_A Hypothetical protein RV 46.5 64 0.0022 26.4 7.2 66 249-324 78-145 (163)
390 3fj1_A Putative phosphosugar i 46.3 16 0.00053 34.8 3.9 73 231-311 63-141 (344)
391 2qu7_A Putative transcriptiona 46.3 12 0.0004 32.5 2.8 66 228-298 28-93 (288)
392 2pr7_A Haloacid dehalogenase/e 46.3 32 0.0011 25.9 5.0 48 245-298 73-120 (137)
393 1zu1_A DSRBP-ZFA, RNA binding 46.2 11 0.00038 31.5 2.6 27 155-181 31-58 (127)
394 2ah5_A COG0546: predicted phos 46.2 17 0.00057 30.2 3.7 65 231-300 94-165 (210)
395 3nvb_A Uncharacterized protein 46.1 54 0.0018 32.6 7.8 65 231-299 266-338 (387)
396 1l8d_A DNA double-strand break 45.9 20 0.0007 28.6 4.0 11 157-167 48-58 (112)
397 2jvm_A Uncharacterized protein 45.2 5.6 0.00019 32.5 0.6 18 154-171 51-68 (80)
398 2pr7_A Haloacid dehalogenase/e 45.1 76 0.0026 23.8 7.0 67 230-300 27-102 (137)
399 3n28_A Phosphoserine phosphata 45.1 42 0.0014 30.6 6.4 89 218-312 174-286 (335)
400 2pib_A Phosphorylated carbohyd 45.0 21 0.00071 28.4 3.9 22 228-249 91-112 (216)
401 3p96_A Phosphoserine phosphata 44.4 56 0.0019 30.9 7.4 86 220-312 254-364 (415)
402 3m1y_A Phosphoserine phosphata 44.3 67 0.0023 26.0 6.9 83 221-310 74-181 (217)
403 4gpa_A Glutamate receptor 4; P 44.3 27 0.00094 31.1 5.0 61 231-292 151-211 (389)
404 2fi1_A Hydrolase, haloacid deh 44.2 88 0.003 24.7 7.5 65 229-300 90-163 (190)
405 1l7m_A Phosphoserine phosphata 43.6 32 0.0011 27.4 4.8 75 228-308 83-180 (211)
406 1mjh_A Protein (ATP-binding do 43.5 82 0.0028 24.9 7.3 37 263-299 94-130 (162)
407 3vot_A L-amino acid ligase, BL 43.4 21 0.00072 33.8 4.3 38 262-299 1-38 (425)
408 3a1c_A Probable copper-exporti 43.3 42 0.0014 29.9 6.0 77 228-312 170-249 (287)
409 3ij5_A 3-deoxy-D-manno-octulos 43.2 36 0.0012 29.9 5.5 73 229-309 84-162 (211)
410 3s6j_A Hydrolase, haloacid deh 43.1 14 0.00048 30.1 2.7 72 228-302 98-177 (233)
411 1lss_A TRK system potassium up 43.1 43 0.0015 25.7 5.3 72 226-297 16-102 (140)
412 2pke_A Haloacid delahogenase-l 43.1 42 0.0014 28.2 5.7 69 229-302 120-193 (251)
413 2jrr_A Uncharacterized protein 42.4 5.3 0.00018 31.5 0.0 16 154-169 38-53 (67)
414 3ks9_A Mglur1, metabotropic gl 42.2 40 0.0014 32.9 6.1 67 229-297 217-290 (496)
415 3h6g_A Glutamate receptor, ion 42.1 30 0.001 31.6 4.9 59 232-292 160-218 (395)
416 3gyb_A Transcriptional regulat 42.0 16 0.00054 31.5 2.9 65 227-299 25-89 (280)
417 3mn1_A Probable YRBI family ph 41.9 36 0.0012 28.7 5.2 74 229-310 54-133 (189)
418 3kzx_A HAD-superfamily hydrola 41.8 53 0.0018 26.9 6.1 68 228-302 110-190 (231)
419 2gmw_A D,D-heptose 1,7-bisphos 41.6 68 0.0023 27.2 6.8 17 231-247 60-76 (211)
420 1wir_A Protein arginine N-meth 41.6 15 0.00052 31.5 2.7 29 153-181 12-40 (121)
421 4iin_A 3-ketoacyl-acyl carrier 40.9 51 0.0017 29.1 6.1 70 226-298 42-116 (271)
422 3n1u_A Hydrolase, HAD superfam 40.6 46 0.0016 28.3 5.6 72 230-309 55-132 (191)
423 3h5t_A Transcriptional regulat 40.3 23 0.00077 32.2 3.8 71 256-330 119-189 (366)
424 2vpz_A Thiosulfate reductase; 40.3 31 0.0011 35.9 5.3 49 264-312 198-252 (765)
425 1y80_A Predicted cobalamin bin 40.2 93 0.0032 27.0 7.7 65 229-298 108-179 (210)
426 3jvd_A Transcriptional regulat 40.1 16 0.00056 33.0 2.9 90 227-329 84-173 (333)
427 1zw8_A Zinc-responsive transcr 39.6 19 0.00063 26.7 2.6 28 157-184 2-31 (64)
428 3sd7_A Putative phosphatase; s 39.6 16 0.00054 30.5 2.5 68 228-302 117-197 (240)
429 3mc1_A Predicted phosphatase, 39.6 19 0.00065 29.4 2.9 71 228-302 93-172 (226)
430 3lc0_A Histidyl-tRNA synthetas 39.3 53 0.0018 32.8 6.6 92 222-330 333-438 (456)
431 3qek_A NMDA glutamate receptor 38.8 15 0.00053 33.5 2.5 43 255-297 205-250 (384)
432 4g9b_A Beta-PGM, beta-phosphog 38.8 72 0.0025 27.3 6.6 35 262-299 162-196 (243)
433 1byk_A Protein (trehalose oper 38.6 33 0.0011 29.1 4.4 65 227-297 22-87 (255)
434 3ed5_A YFNB; APC60080, bacillu 38.6 86 0.003 25.4 6.8 31 82-114 9-40 (238)
435 3s3t_A Nucleotide-binding prot 38.3 91 0.0031 24.1 6.6 46 254-299 71-118 (146)
436 3nas_A Beta-PGM, beta-phosphog 37.7 1.7E+02 0.0056 23.9 9.4 20 229-248 100-119 (233)
437 3qnm_A Haloacid dehalogenase-l 37.3 98 0.0034 25.0 6.9 30 82-112 7-36 (240)
438 1zrn_A L-2-haloacid dehalogena 37.3 1E+02 0.0034 25.3 7.0 65 231-298 105-177 (232)
439 2e7z_A Acetylene hydratase AHY 37.1 24 0.00084 36.3 3.9 48 264-311 159-212 (727)
440 1moq_A Glucosamine 6-phosphate 36.6 18 0.00062 34.3 2.7 46 266-311 100-150 (368)
441 3lc0_A Histidyl-tRNA synthetas 36.6 22 0.00075 35.5 3.4 44 227-275 378-421 (456)
442 2iv2_X Formate dehydrogenase H 36.6 27 0.00092 35.9 4.1 49 264-312 165-218 (715)
443 3qvo_A NMRA family protein; st 36.5 35 0.0012 29.3 4.3 75 226-301 36-128 (236)
444 3rsc_A CALG2; TDP, enediyne, s 36.3 1.3E+02 0.0046 27.3 8.3 31 264-297 117-148 (415)
445 1tzb_A Glucose-6-phosphate iso 36.3 42 0.0015 30.9 5.1 45 264-310 78-125 (302)
446 2p9j_A Hypothetical protein AQ 36.0 1.2E+02 0.0039 24.2 7.0 65 231-302 46-113 (162)
447 2yxb_A Coenzyme B12-dependent 35.6 92 0.0032 26.6 6.8 65 229-298 38-108 (161)
448 2gm3_A Unknown protein; AT3G01 35.6 80 0.0027 25.5 6.1 37 263-299 98-134 (175)
449 1zjj_A Hypothetical protein PH 35.6 90 0.0031 27.1 6.8 46 244-298 185-232 (263)
450 3qiv_A Short-chain dehydrogena 35.2 56 0.0019 28.1 5.4 69 226-298 22-95 (253)
451 3fwz_A Inner membrane protein 35.0 27 0.00092 28.1 3.1 72 226-297 19-106 (140)
452 3umb_A Dehalogenase-like hydro 34.9 1E+02 0.0035 25.1 6.7 44 262-308 168-214 (233)
453 3h5l_A Putative branched-chain 34.5 21 0.00071 32.9 2.7 66 230-297 185-252 (419)
454 1o97_C Electron transferring f 34.2 1.1E+02 0.0037 28.5 7.5 66 230-299 46-122 (264)
455 3ff4_A Uncharacterized protein 34.1 7.3 0.00025 32.6 -0.4 35 256-291 73-107 (122)
456 2ivf_A Ethylbenzene dehydrogen 33.9 41 0.0014 36.4 5.2 48 264-311 245-297 (976)
457 3ruf_A WBGU; rossmann fold, UD 33.6 60 0.0021 29.0 5.5 76 226-302 38-155 (351)
458 3v2g_A 3-oxoacyl-[acyl-carrier 33.5 77 0.0026 28.3 6.2 70 226-298 44-118 (271)
459 2dum_A Hypothetical protein PH 33.5 94 0.0032 24.9 6.2 24 276-299 104-127 (170)
460 4fe3_A Cytosolic 5'-nucleotida 33.1 60 0.0021 29.1 5.4 28 221-248 140-168 (297)
461 3fvv_A Uncharacterized protein 32.6 45 0.0015 27.6 4.2 77 228-310 99-201 (232)
462 3tbf_A Glucosamine--fructose-6 32.5 21 0.00071 34.4 2.4 46 266-311 102-152 (372)
463 3tjr_A Short chain dehydrogena 32.4 1E+02 0.0036 27.8 6.9 70 225-298 43-117 (301)
464 3hsy_A Glutamate receptor 2; l 32.2 36 0.0012 31.2 3.9 61 231-291 142-205 (376)
465 4e3z_A Putative oxidoreductase 32.0 84 0.0029 27.6 6.1 70 226-298 39-113 (272)
466 2gmg_A Hypothetical protein PF 31.9 15 0.00052 31.2 1.2 13 154-166 65-77 (105)
467 2pln_A HP1043, response regula 31.9 1.4E+02 0.0046 22.5 6.5 63 227-299 32-96 (137)
468 3g85_A Transcriptional regulat 31.9 6.8 0.00023 33.9 -1.0 92 227-328 32-125 (289)
469 3um9_A Haloacid dehalogenase, 31.7 1.3E+02 0.0045 24.3 6.8 65 231-298 106-178 (230)
470 1iuk_A Hypothetical protein TT 31.5 28 0.00096 29.0 2.8 39 258-299 87-125 (140)
471 2nap_A Protein (periplasmic ni 31.5 47 0.0016 34.1 4.9 49 264-312 165-220 (723)
472 3e58_A Putative beta-phosphogl 31.0 82 0.0028 24.8 5.3 29 82-112 7-36 (214)
473 3i4f_A 3-oxoacyl-[acyl-carrier 31.0 1.1E+02 0.0039 26.3 6.7 70 226-298 20-94 (264)
474 3osu_A 3-oxoacyl-[acyl-carrier 31.0 95 0.0033 26.9 6.2 68 226-297 17-90 (246)
475 3gi1_A LBP, laminin-binding pr 30.8 3.2E+02 0.011 25.2 11.3 67 227-297 187-259 (286)
476 3dx5_A Uncharacterized protein 30.6 1.1E+02 0.0037 26.7 6.5 49 248-297 80-143 (286)
477 1h0h_A Formate dehydrogenase ( 30.4 57 0.0019 35.4 5.5 48 264-311 183-235 (977)
478 1lko_A Rubrerythrin all-iron(I 30.3 14 0.00048 32.9 0.8 27 140-166 137-165 (191)
479 4dcc_A Putative haloacid dehal 30.3 74 0.0025 26.4 5.2 50 244-299 171-220 (229)
480 3dqp_A Oxidoreductase YLBE; al 30.1 38 0.0013 28.4 3.4 73 226-299 13-107 (219)
481 2h54_A Caspase-1; allosteric s 29.9 57 0.0019 28.9 4.6 75 186-272 31-114 (178)
482 3tsa_A SPNG, NDP-rhamnosyltran 29.7 1.5E+02 0.005 26.8 7.4 33 264-299 113-145 (391)
483 3u26_A PF00702 domain protein; 29.6 1.2E+02 0.0042 24.5 6.3 22 281-302 161-186 (234)
484 4fe7_A Xylose operon regulator 29.4 37 0.0013 31.8 3.5 63 227-298 44-106 (412)
485 3e48_A Putative nucleoside-dip 29.3 23 0.00078 31.0 1.9 35 264-298 64-106 (289)
486 3qnm_A Haloacid dehalogenase-l 29.2 1.3E+02 0.0043 24.4 6.3 71 227-302 113-193 (240)
487 3d6j_A Putative haloacid dehal 29.2 55 0.0019 26.1 4.0 19 230-248 98-116 (225)
488 4g84_A Histidine--tRNA ligase, 29.1 20 0.00068 34.6 1.6 75 238-328 367-442 (464)
489 3ctp_A Periplasmic binding pro 29.0 68 0.0023 28.6 5.0 64 228-298 81-144 (330)
490 3e8x_A Putative NAD-dependent 28.9 66 0.0023 27.3 4.7 74 226-300 34-133 (236)
491 3k1z_A Haloacid dehalogenase-l 28.8 1.4E+02 0.0049 25.5 6.9 22 229-250 114-135 (263)
492 3s99_A Basic membrane lipoprot 28.8 1.5E+02 0.005 28.4 7.6 80 228-312 49-132 (356)
493 3jx9_A Putative phosphoheptose 28.8 81 0.0028 27.9 5.4 34 264-297 76-112 (170)
494 2duw_A Putative COA-binding pr 28.6 31 0.0011 28.8 2.6 31 265-295 70-100 (145)
495 1s24_A Rubredoxin 2; electron 28.6 18 0.0006 29.8 1.0 21 116-136 9-29 (87)
496 2xw6_A MGS, methylglyoxal synt 28.5 90 0.0031 26.9 5.5 61 228-292 39-108 (134)
497 2jz8_A Uncharacterized protein 28.5 12 0.00041 31.0 -0.0 19 154-172 46-64 (87)
498 2b0c_A Putative phosphatase; a 28.5 93 0.0032 24.9 5.3 35 262-299 161-195 (206)
499 3e58_A Putative beta-phosphogl 28.3 2E+02 0.0067 22.6 7.1 16 282-297 175-190 (214)
500 1gee_A Glucose 1-dehydrogenase 28.3 86 0.0029 26.9 5.4 68 226-297 20-93 (261)
No 1
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=98.38 E-value=3.4e-07 Score=79.15 Aligned_cols=83 Identities=24% Similarity=0.210 Sum_probs=65.7
Q ss_pred HHHhcceEEEEeCC-------CchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-CCcEEEEcCC---CC
Q 014830 232 ELRRAGVFVKTVRD-------KPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-NLGTVVVGDS---NR 300 (417)
Q Consensus 232 ELkRAGV~VrtV~d-------KPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-~v~TVVVGd~---~~ 300 (417)
.|++.||.|++.+- ...+.|.+|--.|.... ..++++||||.|+||+.+++.+|++ |.+++|+|-. ..
T Consensus 69 ~L~~~g~~v~~~p~~~~~~~~~k~~~Dv~laiD~~~~a-~~~d~~vLvSgD~DF~plv~~lr~~~G~~V~v~g~~~~~s~ 147 (165)
T 2qip_A 69 ILRGVGFEVMLKPYIQRRDGSAKGDWDVGITLDAIEIA-PDVDRVILVSGDGDFSLLVERIQQRYNKKVTVYGVPRLTSQ 147 (165)
T ss_dssp HHHHHTCEEEECCCCCCSSCCCSCCCHHHHHHHHHHHG-GGCSEEEEECCCGGGHHHHHHHHHHHCCEEEEEECGGGSCH
T ss_pred HHHHCCcEEEEEeeeeccCCccCCCccHHHHHHHHHhh-ccCCEEEEEECChhHHHHHHHHHHHcCcEEEEEeCCCcChH
Confidence 56667888775432 23589999976666554 6799999999999999999999997 9999999963 24
Q ss_pred ccccccccccchhhh
Q 014830 301 GLGQHADLWVPWIEV 315 (417)
Q Consensus 301 ~L~R~ADl~fSW~eV 315 (417)
.|.+.||-.+.++++
T Consensus 148 ~L~~~ad~fi~l~~~ 162 (165)
T 2qip_A 148 TLIDCADNFVAIDDD 162 (165)
T ss_dssp HHHHHSSEEEECSGG
T ss_pred HHHHhCCEEEecchh
Confidence 788999988877664
No 2
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.87 E-value=3.6e-06 Score=50.50 Aligned_cols=29 Identities=28% Similarity=0.638 Sum_probs=26.1
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|..||+.|.+...|.+|...+|..|
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~ 29 (30)
T 1paa_A 1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN 29 (30)
T ss_dssp CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence 48999999999999999999987888765
No 3
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.79 E-value=7.6e-06 Score=48.52 Aligned_cols=28 Identities=29% Similarity=0.754 Sum_probs=24.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|.+||+.|.+...|.+|.+ +|..|
T Consensus 2 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 29 (30)
T 2m0d_A 2 KPYQCDYCGRSFSDPTSKMRHLE-THDTD 29 (30)
T ss_dssp CCEECTTTCCEESCHHHHHHHHH-TTCCC
T ss_pred cCccCCCCCcccCCHHHHHHHHH-HhccC
Confidence 68999999999999999999986 46543
No 4
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=97.73 E-value=1.5e-05 Score=50.31 Aligned_cols=30 Identities=27% Similarity=0.476 Sum_probs=26.3
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
.||.|.+||+.|.+...|.+|.+ +|..|+.
T Consensus 1 kp~~C~~C~k~F~~~~~L~~H~~-~H~~~~~ 30 (33)
T 1rim_A 1 YKFACPECPKRFMRSDHLSKHIT-LHELLGE 30 (33)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHH-HHTTTCC
T ss_pred CcccCCCCCchhCCHHHHHHHHH-HhCCCCC
Confidence 48999999999999999999975 6887653
No 5
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=97.72 E-value=1.4e-05 Score=47.41 Aligned_cols=28 Identities=32% Similarity=0.806 Sum_probs=24.2
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
+||.|++||+.|.+...|..|.+. |..|
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~-h~~~ 28 (29)
T 1ard_A 1 RSFVCEVCTRAFARQEHLKRHYRS-HTNE 28 (29)
T ss_dssp CCCBCTTTCCBCSSHHHHHHHHHH-HSCC
T ss_pred CCeECCCCCcccCCHHHHHHHHHH-hcCC
Confidence 489999999999999999999764 6544
No 6
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=97.72 E-value=1.2e-05 Score=55.29 Aligned_cols=34 Identities=29% Similarity=0.734 Sum_probs=27.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQK 186 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~K 186 (417)
..+||.|.+||+.|.....|++|.+.+|..|...
T Consensus 4 ~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~ 37 (48)
T 3iuf_A 4 RDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG 37 (48)
T ss_dssp TTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred CCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence 3579999999999999999999999889877654
No 7
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.71 E-value=1.4e-05 Score=53.00 Aligned_cols=33 Identities=30% Similarity=0.649 Sum_probs=29.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|.+||+.|.+...|.+|.+.+|..|+.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~ 41 (47)
T 2epx_A 9 GKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP 41 (47)
T ss_dssp CCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCS
T ss_pred CCCCEECCccCchhCChHHHHHHhHhhcCCCCC
Confidence 467999999999999999999999878987653
No 8
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.70 E-value=1.5e-05 Score=50.24 Aligned_cols=30 Identities=23% Similarity=0.597 Sum_probs=25.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|++||+.|.+...|.+|.+ +|..|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2els_A 6 SGKIFTCEYCNKVFKFKHSLQAHLR-IHTNE 35 (36)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHH-HHCCC
T ss_pred CCCCEECCCCCceeCCHHHHHHHHH-HhCCC
Confidence 4579999999999999999999976 57654
No 9
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=97.68 E-value=1.7e-05 Score=49.18 Aligned_cols=31 Identities=19% Similarity=0.525 Sum_probs=26.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.....|.+|.+ +|..|+
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~k 34 (35)
T 2elx_A 4 GSSGYVCALCLKKFVSSIRLRSHIR-EVHGAA 34 (35)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-HTSCTT
T ss_pred CCCCeECCCCcchhCCHHHHHHHHH-HHcCCC
Confidence 3579999999999999999999976 566553
No 10
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.67 E-value=2.3e-05 Score=49.04 Aligned_cols=30 Identities=33% Similarity=0.660 Sum_probs=25.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|.+||+.|.+...|.+|.+ +|..|
T Consensus 6 ~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~e 35 (36)
T 2elr_A 6 SGKTHLCDMCGKKFKSKGTLKSHKL-LHTAD 35 (36)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHHH-HHSSC
T ss_pred CCCCeecCcCCCCcCchHHHHHHHH-HhcCC
Confidence 4579999999999999999999975 56544
No 11
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.67 E-value=1.9e-05 Score=49.42 Aligned_cols=30 Identities=27% Similarity=0.598 Sum_probs=25.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|.+||+.|.+...|.+|.+ +|..|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2elt_A 6 SGKPYKCPQCSYASAIKANLNVHLR-KHTGE 35 (36)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHH-HHTCC
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHH-HccCC
Confidence 3579999999999999999999975 57654
No 12
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=97.66 E-value=1.6e-05 Score=47.31 Aligned_cols=28 Identities=25% Similarity=0.490 Sum_probs=24.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|+.||+.|.+...|..|.+ +|..|
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 28 (29)
T 1rik_A 1 YKFACPECPKRFMRSDHLTLHIL-LHENK 28 (29)
T ss_dssp CCEECSSSSCEESCSHHHHHHHT-GGGSC
T ss_pred CCccCCCCCchhCCHHHHHHHHH-HhcCC
Confidence 48999999999999999999986 57644
No 13
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.66 E-value=1.9e-05 Score=46.42 Aligned_cols=28 Identities=29% Similarity=0.511 Sum_probs=24.5
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
+||.|+.||+.|.+...|..|.+ +|..|
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 28 (29)
T 2m0e_A 1 KEHKCPHCDKKFNQVGNLKAHLK-IHIAD 28 (29)
T ss_dssp CCCCCSSCCCCCCTTTHHHHHHH-HHHSC
T ss_pred CCCcCCCCCcccCCHHHHHHHHH-HhccC
Confidence 48999999999999999999985 57654
No 14
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.65 E-value=1.9e-05 Score=49.82 Aligned_cols=30 Identities=33% Similarity=0.636 Sum_probs=25.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|.+||+.|.....|.+|.+ +|..|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2elv_A 6 SGLLYDCHICERKFKNELDRDRHML-VHGDK 35 (36)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHT-TTSTT
T ss_pred CCCCeECCCCCCccCCHHHHHHHHH-HhcCC
Confidence 4579999999999999999999976 47654
No 15
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=97.64 E-value=2.3e-05 Score=46.24 Aligned_cols=28 Identities=36% Similarity=0.823 Sum_probs=24.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
+||.|+.||+.|.+...|..|.+ +|..|
T Consensus 1 ~~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 28 (29)
T 2m0f_A 1 GPLKCRECGKQFTTSGNLKRHLR-IHSGE 28 (29)
T ss_dssp CCEECTTTSCEESCHHHHHHHHH-HHHTC
T ss_pred CCccCCCCCCccCChhHHHHHHH-HhcCC
Confidence 48999999999999999999975 57654
No 16
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.77 E-value=8.4e-06 Score=48.86 Aligned_cols=29 Identities=28% Similarity=0.612 Sum_probs=25.0
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
.||.|..||+.|.+...|..|.+ +|..|+
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~-~H~~~k 29 (29)
T 2lvt_A 1 KPCQCVMCGKAFTQASSLIAHVR-QHTGEK 29 (29)
Confidence 48999999999999999999985 676653
No 17
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=97.60 E-value=2.7e-05 Score=48.65 Aligned_cols=31 Identities=23% Similarity=0.597 Sum_probs=26.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 4 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~ 34 (35)
T 1srk_A 4 GKRPFVCRICLSAFTTKANCARHLK-VHTDTL 34 (35)
T ss_dssp CCSCEECSSSCCEESSHHHHHHHHG-GGTSCC
T ss_pred CCcCeeCCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 3579999999999999999999975 576543
No 18
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.59 E-value=2.9e-05 Score=49.19 Aligned_cols=30 Identities=27% Similarity=0.391 Sum_probs=25.8
Q ss_pred CCCCeecccCCCCCCCh-HHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTN-LDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~-~kL~kHFKQLHERE 183 (417)
...||.|++||+.|.+. ..|.+|.+ +|..|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~~L~~H~~-~H~~~ 36 (37)
T 2elp_A 6 SGRAMKCPYCDFYFMKNGSDLQRHIW-AHEGV 36 (37)
T ss_dssp CCCCEECSSSSCEECSSCHHHHHHHH-HHHTC
T ss_pred CCCCeECCCCChhhccCHHHHHHHHH-hcCCC
Confidence 45799999999999999 99999975 57654
No 19
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=97.57 E-value=2.5e-05 Score=45.82 Aligned_cols=25 Identities=32% Similarity=0.798 Sum_probs=21.6
Q ss_pred CeecccCCCCCCChHHHHHHHHHhhh
Q 014830 156 PYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 156 PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
||.|.+||+.|.+...|.+|.+ +|.
T Consensus 1 ~~~C~~C~k~f~~~~~l~~H~~-~h~ 25 (27)
T 1znf_A 1 XYKCGLCERSFVEKSALSRHQR-VHK 25 (27)
T ss_dssp -CBCSSSCCBCSSHHHHHHHGG-GTC
T ss_pred CccCCCCCCcCCCHHHHHHHHH-HcC
Confidence 6999999999999999999975 454
No 20
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.57 E-value=3.4e-05 Score=48.60 Aligned_cols=30 Identities=27% Similarity=0.681 Sum_probs=25.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|.+||+.|.+...|.+|.+ +|..|
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~ 35 (36)
T 2elq_A 6 SGKPFKCSLCEYATRSKSNLKAHMN-RHSTE 35 (36)
T ss_dssp CCCSEECSSSSCEESCHHHHHHHHH-HSSTT
T ss_pred CCCCccCCCCCchhCCHHHHHHHHH-HhccC
Confidence 4579999999999999999999975 57654
No 21
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.57 E-value=3.8e-05 Score=51.01 Aligned_cols=31 Identities=32% Similarity=0.693 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ep3_A 9 GEKPYRCAECGKAFTDRSNLFTHQK-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHT-TTTTSC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999985 687664
No 22
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.55 E-value=3.9e-05 Score=51.09 Aligned_cols=32 Identities=31% Similarity=0.626 Sum_probs=27.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~ 40 (46)
T 2yto_A 9 GEKPYKCSDCGKAFTRKSGLHIHQQ-SHTGERH 40 (46)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHH-HHTCCCB
T ss_pred CCCCEECcccCCccCCHhHHHHHHH-HcCCCCC
Confidence 4579999999999999999999975 5876643
No 23
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=97.55 E-value=2.7e-05 Score=50.20 Aligned_cols=31 Identities=32% Similarity=0.796 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
++.||.|.+||+.|.+...|..|.+ +|..|+
T Consensus 3 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 33 (39)
T 1njq_A 3 PPRSYTCSFCKREFRSAQALGGHMN-VHRRDR 33 (39)
T ss_dssp CSSSEECTTTCCEESSHHHHHHHHH-TTCCSC
T ss_pred CCCceECCCCCcccCCHHHHHHHHH-HcCCCc
Confidence 4579999999999999999999975 687665
No 24
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.55 E-value=2.6e-05 Score=54.23 Aligned_cols=34 Identities=38% Similarity=0.736 Sum_probs=30.3
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQK 186 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~K 186 (417)
..+||.|.+||+.|.+...|.+|.+++|..|+.-
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~ 42 (54)
T 2eps_A 9 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPH 42 (54)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCc
Confidence 4579999999999999999999999999877643
No 25
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=96.69 E-value=1.2e-05 Score=48.07 Aligned_cols=28 Identities=32% Similarity=0.740 Sum_probs=24.5
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|..||+.|.+...|.+|.+ +|..|
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~-~h~~~ 29 (30)
T 2lvr_A 2 KPYVCIHCQRQFADPGALQRHVR-IHTGE 29 (30)
Confidence 58999999999999999999976 46654
No 26
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=97.54 E-value=5.3e-05 Score=50.43 Aligned_cols=31 Identities=29% Similarity=0.676 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emk_A 9 GEKPYECKECGKAFSQTTHLIQHQR-VHTGEK 39 (46)
T ss_dssp SSCSCBCSSSCCBCSCHHHHHHHHH-HHSSCC
T ss_pred CCCceECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999986 587664
No 27
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.53 E-value=2.9e-05 Score=49.04 Aligned_cols=31 Identities=26% Similarity=0.498 Sum_probs=26.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 6 ~~k~~~C~~C~k~f~~~~~l~~H~~-~h~~~k 36 (37)
T 2elo_A 6 SGRSYSCPVCEKSFSEDRLIKSHIK-TNHPEV 36 (37)
T ss_dssp CCCCCEETTTTEECSSHHHHHHHHH-HHCSSC
T ss_pred CCCCcCCCCCCCccCCHHHHHHHHH-HHcCCC
Confidence 4579999999999999999999986 466553
No 28
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.52 E-value=3.2e-05 Score=50.28 Aligned_cols=31 Identities=26% Similarity=0.599 Sum_probs=27.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
.++||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 38 (42)
T 2en2_A 8 GEKPYKCETCGARFVQVAHLRAHVL-IHTGSG 38 (42)
T ss_dssp SSCSEECTTTCCEESSHHHHHHHTH-HHHSCC
T ss_pred CCCCEeCCCcChhhCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999986 787664
No 29
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.52 E-value=5.3e-05 Score=44.86 Aligned_cols=23 Identities=22% Similarity=0.772 Sum_probs=21.7
Q ss_pred CCeecccCCCCCCChHHHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
+||.|..||+.|.+...|.+|.+
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 2 KPFSCSLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp CCEECSSSSCEESSHHHHHHHHH
T ss_pred cCccCCCcChhhCCHHHHHHHHH
Confidence 68999999999999999999975
No 30
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=97.51 E-value=5.1e-05 Score=47.87 Aligned_cols=28 Identities=29% Similarity=0.430 Sum_probs=24.3
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
..+||.|++||+.|.+...|.+|.+ +|.
T Consensus 8 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~ 35 (37)
T 1p7a_A 8 GIKPFQCPDCDRSFSRSDHLALHRK-RHM 35 (37)
T ss_dssp CSSSBCCTTTCCCBSSHHHHHHHHG-GGT
T ss_pred CCCCccCCCCCcccCcHHHHHHHHH-Hhc
Confidence 4579999999999999999999975 454
No 31
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.50 E-value=3.1e-05 Score=49.72 Aligned_cols=30 Identities=30% Similarity=0.455 Sum_probs=26.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHER 182 (417)
..+||.|..||+.|.+...|.+|..++|..
T Consensus 6 ~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 6 SGHLYYCSQCHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp SSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred CCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence 357999999999999999999996677864
No 32
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.49 E-value=5.7e-05 Score=50.13 Aligned_cols=31 Identities=29% Similarity=0.718 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eml_A 9 GEKPYECSVCGKAFSHRQSLSVHQR-IHSGKK 39 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHG-GGSSCC
T ss_pred CCCCeeCCCcCCccCCHHHHHHHHH-HhcCCC
Confidence 4579999999999999999999975 577654
No 33
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.48 E-value=5.5e-05 Score=50.20 Aligned_cols=32 Identities=31% Similarity=0.607 Sum_probs=27.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~~ 40 (46)
T 2en3_A 9 GEKPFQCKECGMNFSWSCSLFKHLR-SHERTDP 40 (46)
T ss_dssp CCCSEECSSSCCEESSSHHHHHHHH-HHHHSCC
T ss_pred CCCCeeCcccChhhCCHHHHHHHHH-HhCCCCC
Confidence 4689999999999999999999984 6877653
No 34
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.48 E-value=4.9e-05 Score=49.23 Aligned_cols=31 Identities=29% Similarity=0.563 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 37 (42)
T 2yte_A 7 GEKPYSCAECKETFSDNNRLVQHQK-MHTVKS 37 (42)
T ss_dssp SCCSCBCTTTCCBCSSHHHHHHHHH-HTSCCS
T ss_pred CCCCeECCCCCCccCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999976 576654
No 35
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.48 E-value=4.7e-05 Score=50.44 Aligned_cols=31 Identities=26% Similarity=0.408 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (44)
T 2epv_A 9 GEKPYECNECGKAFIWKSLLIVHER-THAGVS 39 (44)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHG-GGSSCS
T ss_pred CCcCeECCCCCcccCchHHHHHHHh-HhcCCC
Confidence 4579999999999999999999976 687664
No 36
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=97.47 E-value=6.1e-05 Score=49.99 Aligned_cols=31 Identities=32% Similarity=0.663 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ema_A 9 GEKRYKCNECGKVFSRNSQLSQHQK-IHTGEK 39 (46)
T ss_dssp TSCCEECSSSCCEESSHHHHHHHHT-GGGCCC
T ss_pred CCcCcCCCCCcchhCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999975 587664
No 37
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.46 E-value=8.7e-05 Score=49.37 Aligned_cols=32 Identities=31% Similarity=0.733 Sum_probs=27.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~ 40 (46)
T 2emz_A 9 GERPFKCNECGKGFGRRSHLAGHLR-LHSREKS 40 (46)
T ss_dssp CCCSCCCSSSCCCCSSHHHHHHHHH-HHHHTTC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHH-HhCCCCC
Confidence 4579999999999999999999976 6877653
No 38
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=97.46 E-value=4.1e-05 Score=56.90 Aligned_cols=36 Identities=22% Similarity=0.567 Sum_probs=22.3
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRM 191 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL 191 (417)
+||.|.+||+.|.+...|.+|.+ +|..|+.=....+
T Consensus 3 Kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~C 38 (60)
T 4gzn_C 3 RPFFCNFCGKTYRDASGLSRHRR-AHLGYRPRSCPEC 38 (60)
T ss_dssp CCEECTTTCCEESSHHHHHHHHH-HHHTCCCEECTTT
T ss_pred CCccCCCCCCEeCCHHHHHHHHH-HhCCCcCeECCCC
Confidence 56666666666666666666654 4666655444443
No 39
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=97.45 E-value=6.4e-05 Score=48.64 Aligned_cols=31 Identities=26% Similarity=0.605 Sum_probs=26.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 8 ~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~k 38 (42)
T 2epc_A 8 GETPYLCGQCGKSFTQRGSLAVHQR-SCSQSG 38 (42)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHH-HTTCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHhh-hcCCCC
Confidence 4679999999999999999999975 576654
No 40
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=97.45 E-value=5.6e-05 Score=44.66 Aligned_cols=27 Identities=26% Similarity=0.557 Sum_probs=23.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHER 182 (417)
+||.|..||+.|.+...|..|.+. |..
T Consensus 1 k~~~C~~C~k~f~~~~~l~~H~~~-h~~ 27 (30)
T 1klr_A 1 KTYQCQYCEFRSADSSNLKTHIKT-KHS 27 (30)
T ss_dssp CCCCCSSSSCCCSCSHHHHHHHHH-HTS
T ss_pred CCccCCCCCCccCCHHHHHHHHHH-Hcc
Confidence 479999999999999999999874 443
No 41
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.44 E-value=4.7e-05 Score=50.54 Aligned_cols=31 Identities=35% Similarity=0.757 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2emg_A 9 GENPFICSECGKVFTHKTNLIIHQK-IHTGER 39 (46)
T ss_dssp SCCSCBCTTTCCBCSSHHHHHHHHT-TTSCCC
T ss_pred CCCCEECCccCcccCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999975 687664
No 42
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.43 E-value=7.8e-05 Score=49.61 Aligned_cols=31 Identities=35% Similarity=0.729 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+. |..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k 39 (46)
T 2eoo_A 9 GERPYGCNECGKNFGRHSHLIEHLKR-HFREK 39 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHH-HHSTT
T ss_pred CCCCEEccccCcccCCHHHHHHHHHH-HcCCC
Confidence 46899999999999999999999764 87665
No 43
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.43 E-value=6.2e-05 Score=49.79 Aligned_cols=31 Identities=29% Similarity=0.643 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ep1_A 9 GEKPYECSDCGKSFIKKSQLHVHQR-IHTGEN 39 (46)
T ss_dssp SCCSSCCSSSCCCCSSHHHHHHHHG-GGSSSC
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHH-HhCCCC
Confidence 4679999999999999999999986 587664
No 44
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.43 E-value=4.9e-05 Score=45.51 Aligned_cols=23 Identities=26% Similarity=0.813 Sum_probs=21.6
Q ss_pred CCeecccCCCCCCChHHHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
+||.|++||+.|.....|.+|.+
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvg_A 2 APYRCPLCRAGCPSLASMQAHMR 24 (27)
T ss_dssp CTEEETTTTEEESCHHHHHHHHT
T ss_pred cCcCCCCCCcccCCHHHHHHHHH
Confidence 68999999999999999999975
No 45
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.42 E-value=5.2e-05 Score=49.55 Aligned_cols=31 Identities=29% Similarity=0.626 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (44)
T 2en7_A 9 GMKPYVCNECGKAFRSKSYLIIHTR-THTGES 39 (44)
T ss_dssp SSSSSCCTTTCCCCSSHHHHHHHHT-TTCCSS
T ss_pred CCcCeECCCCCCccCCHHHHHHHhh-hcCCCC
Confidence 4579999999999999999999984 687654
No 46
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=97.42 E-value=4.3e-05 Score=60.34 Aligned_cols=30 Identities=20% Similarity=0.454 Sum_probs=18.4
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
++||.|.+||+.|.+...|.+|.+.+|..|
T Consensus 54 ~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E 83 (85)
T 2lv2_A 54 AQVFPCKYCPATFYSSPGLTRHINKCHPSE 83 (85)
T ss_dssp SSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred CCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence 355666666666666666666666666554
No 47
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.42 E-value=6.9e-05 Score=49.73 Aligned_cols=31 Identities=32% Similarity=0.692 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2enf_A 9 GEKPYKCNECGKVFTQNSHLVRHRG-IHTGEK 39 (46)
T ss_dssp CCCSCBCSSSCCBCSSHHHHHHHHT-TTTTSS
T ss_pred CCcCeECCCCCcccCCHHHHHHHHH-hhCCCC
Confidence 4689999999999999999999964 687664
No 48
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.42 E-value=4.9e-05 Score=50.63 Aligned_cols=31 Identities=32% Similarity=0.806 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eoz_A 9 GEKPYSCNVCGKAFVLSAHLNQHLR-VHTQET 39 (46)
T ss_dssp SCCSEEETTTTEEESSHHHHHHHHH-HHSSCC
T ss_pred CCCCeECcccChhhCCHHHHHHHHH-HhCCCC
Confidence 4679999999999999999999975 587664
No 49
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=97.42 E-value=8.5e-05 Score=49.43 Aligned_cols=31 Identities=26% Similarity=0.678 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emj_A 9 GEKPFECAECGKSFSISSQLATHQR-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHH-HHTTSC
T ss_pred CCCCEECCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999975 587664
No 50
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=97.41 E-value=7.3e-05 Score=44.29 Aligned_cols=23 Identities=30% Similarity=0.982 Sum_probs=21.7
Q ss_pred CCeecccCCCCCCChHHHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
+||.|.+||+.|.+...|.+|.+
T Consensus 2 k~~~C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 2 RPYSCSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp CSEECSSSCCEESCHHHHHHHHT
T ss_pred cCccCCCCCcccCCHHHHHHHHH
Confidence 68999999999999999999975
No 51
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.41 E-value=6.3e-05 Score=49.91 Aligned_cols=31 Identities=29% Similarity=0.723 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eq1_A 9 GEKPYKCNECGKAFRAHSNLTTHQV-IHTGEK 39 (46)
T ss_dssp CSCCCCCTTTTCCCSSHHHHHHHHT-TTCCSC
T ss_pred CCCCeECCcCChhhCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999976 687664
No 52
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.41 E-value=6.1e-05 Score=49.97 Aligned_cols=31 Identities=26% Similarity=0.671 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2epz_A 9 GEKPFDCIDCGKAFSDHIGLNQHRR-IHTGEK 39 (46)
T ss_dssp CCCSBCCTTTCCCBSSHHHHHHHHT-TTTTCC
T ss_pred CCCCeECCCCCceeCCHHHHHHHHH-HhCCCC
Confidence 4679999999999999999999976 687664
No 53
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.41 E-value=5.8e-05 Score=49.93 Aligned_cols=31 Identities=29% Similarity=0.639 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eow_A 9 GEKPYKCNECGKAFRARSSLAIHQA-THSGEK 39 (46)
T ss_dssp CCCCEECTTSCCEESSHHHHHHHHH-HHCCCS
T ss_pred CCCCeeccccCChhcCHHHHHHHHH-HcCCCC
Confidence 4689999999999999999999986 587664
No 54
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.41 E-value=4.7e-05 Score=50.71 Aligned_cols=31 Identities=29% Similarity=0.697 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2enh_A 9 GEKPYECDVCRKAFSHHASLTQHQR-VHSGEK 39 (46)
T ss_dssp CSSSCBCTTTCCBCSSSHHHHHHGG-GSCCSC
T ss_pred CCCCcCCCCcCchhCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999975 687664
No 55
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.41 E-value=8.5e-05 Score=49.26 Aligned_cols=31 Identities=42% Similarity=0.838 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emh_A 9 GERPYICTVCGKAFTDRSNLIKHQK-IHTGEK 39 (46)
T ss_dssp CCCSEECTTTCCEESSHHHHHHHHH-HHHCSS
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHH-hcCCCC
Confidence 4589999999999999999999975 687664
No 56
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.41 E-value=4.5e-05 Score=49.72 Aligned_cols=31 Identities=29% Similarity=0.741 Sum_probs=26.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 38 (42)
T 2eos_A 8 GEKPYPCEICGTRFRHLQTLKSHLR-IHTGSG 38 (42)
T ss_dssp SSCCBCCSSSCCCBSSHHHHHHHTT-TTSCCS
T ss_pred CCCCEECCCCCCccCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999976 676554
No 57
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.40 E-value=7.5e-05 Score=49.87 Aligned_cols=31 Identities=32% Similarity=0.660 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytm_A 9 GEKPYKCMECGKAFGDNSSCTQHQR-LHTGQR 39 (46)
T ss_dssp SCCSSSBTTTTBCCSSHHHHHHHHH-HHHSCC
T ss_pred CCCCcCCCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999986 577664
No 58
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.40 E-value=8.8e-05 Score=49.20 Aligned_cols=31 Identities=29% Similarity=0.678 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+. |..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~~-H~~~k 39 (46)
T 2emy_A 9 GENPYECHECGKAFSRKYQLISHQRT-HAGEK 39 (46)
T ss_dssp SSCCEECSSSCCEESSHHHHHHHHHH-HTTSC
T ss_pred CCcCcCCCCCCcccCcHHHHHHHHHH-cCCCC
Confidence 45799999999999999999999764 77654
No 59
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.40 E-value=7.9e-05 Score=49.44 Aligned_cols=31 Identities=32% Similarity=0.661 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 39 (46)
T 2em3_A 9 GEKPYECKVCSKAFTQKAHLAQHQK-THTGEK 39 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHH-HHCCCC
T ss_pred CCcCeECCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 4679999999999999999999986 587664
No 60
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.40 E-value=7.2e-05 Score=49.45 Aligned_cols=31 Identities=23% Similarity=0.416 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|. ++|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2en8_A 9 GEKSHTCDECGKNFCYISALRIHQ-RVHMGEK 39 (46)
T ss_dssp CCSSEECTTTCCEESSHHHHHHHH-TTTCCSC
T ss_pred CCCCeECCCcCcccCCHHHHHHHH-HHhCCCC
Confidence 467999999999999999999997 4687664
No 61
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.40 E-value=6.8e-05 Score=49.75 Aligned_cols=31 Identities=32% Similarity=0.804 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytk_A 9 GEKPYKCNECGKVFTQNSHLTNHWR-IHTGEK 39 (46)
T ss_dssp SSCSEECSSSCCEESSHHHHHHHHH-HHSSSS
T ss_pred CCCCEeCCcCCCccCCHHHHHHHHH-HHCCCC
Confidence 4689999999999999999999986 677654
No 62
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.39 E-value=6.9e-05 Score=49.87 Aligned_cols=31 Identities=32% Similarity=0.724 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 39 (46)
T 2elz_A 9 VEKPYKCEDCGKGYNRRLNLDMHQR-VHMGEK 39 (46)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHGG-GGGSCC
T ss_pred CCCCeeCcccCchhCCHHHHHHHHH-hcCCCC
Confidence 4679999999999999999999976 687654
No 63
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=97.39 E-value=7.2e-05 Score=45.78 Aligned_cols=28 Identities=36% Similarity=0.680 Sum_probs=24.5
Q ss_pred CCeecc--cCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICG--VCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~--VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|. .||+.|.+...|.+|.+ +|..|
T Consensus 2 k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 31 (32)
T 1zfd_A 2 RPYSCDHPGCDKAFVRNHDLIRHKK-SHQEK 31 (32)
T ss_dssp CSBCCCCTTCCCCBSSSHHHHHHHG-GGTCC
T ss_pred CCCcCcCCCCCCccCCHHHHHHHHH-HccCC
Confidence 689999 89999999999999976 47654
No 64
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=97.39 E-value=5e-05 Score=56.45 Aligned_cols=32 Identities=22% Similarity=0.587 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..+||.|.+||+.|.+...|.+|.+ +|+.|.+
T Consensus 29 ~ekp~~C~~C~k~F~~~~~L~~H~~-~Htgepa 60 (60)
T 4gzn_C 29 GYRPRSCPECGKCFRDQSEVNRHLK-VHQNKPA 60 (60)
T ss_dssp TCCCEECTTTCCEESSHHHHHHHGG-GGSCC--
T ss_pred CCcCeECCCCCCCcCCHHHHHHHhC-ccCCCCC
Confidence 4589999999999999999999976 7987753
No 65
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=96.50 E-value=2.5e-05 Score=45.98 Aligned_cols=24 Identities=29% Similarity=0.884 Sum_probs=21.8
Q ss_pred CCeecccCCCCCCChHHHHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
+||.|+.||+.|.+...|.+|.+.
T Consensus 1 kp~~C~~C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 1 KPYVCERCGKRFVQSSQLANHIRH 24 (26)
Confidence 489999999999999999999763
No 66
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.38 E-value=7.6e-05 Score=49.68 Aligned_cols=32 Identities=28% Similarity=0.536 Sum_probs=27.3
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~ 40 (46)
T 2eoh_A 9 GKKPYECKECRKTFIQIGHLNQHKR-VHTGERS 40 (46)
T ss_dssp CSCSCCCSSSCCCCSSHHHHHHHHH-HCSSCCS
T ss_pred CCCCcCCCCcCchhCCHHHHHHHHH-HhCCCCC
Confidence 4579999999999999999999975 6876653
No 67
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.38 E-value=8.5e-05 Score=49.44 Aligned_cols=31 Identities=32% Similarity=0.771 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytt_A 9 GEKPYQCSECGKSFSGSYRLTQHWI-THTREK 39 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHHHHHHT-HHHHCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999975 487664
No 68
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=97.37 E-value=7.6e-05 Score=51.73 Aligned_cols=31 Identities=19% Similarity=0.547 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 21 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 51 (54)
T 1yui_A 21 SEQPATCPICYAVIRQSRNLRRHLE-LRHFAK 51 (54)
T ss_dssp SSCCEECTTTCCEESSHHHHHHHHH-HHTTTS
T ss_pred CCCCccCCCCCcccCCHHHHHHHHH-HhccCC
Confidence 3579999999999999999999986 687664
No 69
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.37 E-value=5.7e-05 Score=50.29 Aligned_cols=31 Identities=26% Similarity=0.552 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytp_A 9 GERHYECSECGKAFARKSTLIMHQR-IHTGEK 39 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHT-TTSCCC
T ss_pred CCCCeECCcCCcccCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999975 687664
No 70
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=97.37 E-value=8e-05 Score=49.56 Aligned_cols=31 Identities=32% Similarity=0.654 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ely_A 9 GEKPFKCVECGKGFSRRSALNVHHK-LHTGEK 39 (46)
T ss_dssp CCCSBCCSSSCCCBSSTTHHHHHHH-HHSCCS
T ss_pred CCCCcccCccCcccCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999976 587664
No 71
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.37 E-value=8.1e-05 Score=49.70 Aligned_cols=31 Identities=19% Similarity=0.400 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2eom_A 9 GERGHRCSDCGKFFLQASNFIQHRR-IHTGEK 39 (46)
T ss_dssp CCSSCCCSSSCCCCSSHHHHHHHHH-HHSSCC
T ss_pred CCCCcCCCCCCCeeCChHHHHHHHH-HhCCCC
Confidence 4579999999999999999999976 587664
No 72
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.37 E-value=9.2e-05 Score=48.33 Aligned_cols=31 Identities=29% Similarity=0.567 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (44)
T 2eof_A 9 GEKPYECNECQKAFNTKSNLMVHQR-THTGES 39 (44)
T ss_dssp CCCSEECTTTCCEESCHHHHHHHHH-HTTTSS
T ss_pred CCCCeECCCCCcccCCHhHHHHHHH-HhCCCC
Confidence 4679999999999999999999986 587664
No 73
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.36 E-value=8.7e-05 Score=49.05 Aligned_cols=31 Identities=29% Similarity=0.712 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eor_A 9 GEKPYNCEECGKAFIHDSQLQEHQR-IHTGEK 39 (46)
T ss_dssp CCCSEECTTTCCEESSHHHHHHHHH-HHHSCC
T ss_pred CCcCccCCCCCCCcCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999975 587664
No 74
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.36 E-value=7.2e-05 Score=49.18 Aligned_cols=31 Identities=26% Similarity=0.535 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (44)
T 2yu5_A 9 GENPFKCSKCDRVFTQRNYLVQHER-THARKS 39 (44)
T ss_dssp CCCSEECSSSSCEESSSHHHHHHHH-HCCCCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHhH-hcCCCC
Confidence 4579999999999999999999976 576654
No 75
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=7e-05 Score=49.68 Aligned_cols=31 Identities=29% Similarity=0.744 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ep2_A 9 GEKPYECSICGKSFTKKSQLHVHQQ-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-TTSSCC
T ss_pred CCcCcCCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999976 687654
No 76
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=7e-05 Score=49.67 Aligned_cols=31 Identities=26% Similarity=0.565 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emi_A 9 GERHYECSECGKAFIQKSTLSMHQR-IHRGEK 39 (46)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHG-GGCSCC
T ss_pred CCCCCCCCCCCcccCCHHHHHHHHh-HhCCCC
Confidence 4579999999999999999999965 587654
No 77
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=9.3e-05 Score=49.24 Aligned_cols=31 Identities=19% Similarity=0.482 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2en9_A 9 GKKLFKCNECKKTFTQSSSLTVHQR-IHTGEK 39 (46)
T ss_dssp SSCCCBCTTTCCBCSSHHHHHHHHH-HHTSSC
T ss_pred CCCCEECCccCcccCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999975 587664
No 78
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.35 E-value=6.9e-05 Score=48.59 Aligned_cols=31 Identities=23% Similarity=0.475 Sum_probs=26.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 37 (41)
T 2ept_A 7 GQRVYECQECGKSFRQKGSLTLHER-IHTGSG 37 (41)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHGG-GCCCCS
T ss_pred CCCCeECCCCCCCcCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999965 687654
No 79
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.35 E-value=8.9e-05 Score=48.74 Aligned_cols=31 Identities=23% Similarity=0.497 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 37 (44)
T 2emx_A 7 GEKPFGCSCCEKAFSSKSYLLVHQQ-THAEEK 37 (44)
T ss_dssp SCCCEECSSSSCEESSHHHHHHHHH-HHTSSC
T ss_pred CCcCccCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999976 587664
No 80
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=9.6e-05 Score=49.16 Aligned_cols=31 Identities=29% Similarity=0.732 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2yth_A 9 GEKPFQCEECGKRFTQNSHLHSHQR-VHTGEK 39 (46)
T ss_dssp CSSSBCCSSSCCCBSSHHHHHHHGG-GGTTCC
T ss_pred CCcCCCCCCCCcccCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999964 687664
No 81
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=6.5e-05 Score=49.85 Aligned_cols=32 Identities=31% Similarity=0.682 Sum_probs=27.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..+||.|.+||+.|.+...|.+|. .+|..|+.
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k~ 40 (46)
T 2yti_A 9 GEKPYKCNECGKVFTQNSHLARHR-GIHTGEKP 40 (46)
T ss_dssp CCCTTCCSSSCCCCSSHHHHHHHH-TTTSCSCC
T ss_pred CCcCeECCCCCcccCChhHHHHHh-HhcCCCCC
Confidence 468999999999999999999996 46876643
No 82
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=97.35 E-value=7.3e-05 Score=49.61 Aligned_cols=31 Identities=19% Similarity=0.378 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 39 (46)
T 2em0_A 9 GEKTWKCRECDMCFSQASSLRLHQN-VHVGEK 39 (46)
T ss_dssp CCCCCCCSSSCCCCSSHHHHHHHGG-GGSSSS
T ss_pred CCcCeECCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 4689999999999999999999975 487665
No 83
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=0.0001 Score=49.08 Aligned_cols=32 Identities=28% Similarity=0.638 Sum_probs=27.4
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|.+||+.|.+...|.+|. ++|..|+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~k~ 40 (46)
T 2em6_A 9 GEKCYKCDVCGKEFSQSSHLQTHQ-RVHTGEKP 40 (46)
T ss_dssp CCCCCBCSSSCCBCSSHHHHHHHH-TTTSSSCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHH-HHcCCCCC
Confidence 468999999999999999999996 47876653
No 84
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.35 E-value=6.2e-05 Score=50.27 Aligned_cols=31 Identities=35% Similarity=0.791 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eon_A 9 GEKPYKCQVCGKAFRVSSHLVQHHS-VHSGER 39 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHHHHHHTT-TTTSCC
T ss_pred CCcccCCCCCCcccCcHHHHHHHHH-hcCCCC
Confidence 4689999999999999999999975 687664
No 85
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.34 E-value=0.0001 Score=48.66 Aligned_cols=31 Identities=35% Similarity=0.647 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eov_A 9 GEKPYKCSDCGKSFTWKSRLRIHQK-CHTGER 39 (46)
T ss_dssp SCCSCBCSSSCCBCSSHHHHHHHHH-HHSCCS
T ss_pred CCCCccCCccChhhCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999975 687654
No 86
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.33 E-value=0.00011 Score=48.44 Aligned_cols=31 Identities=26% Similarity=0.418 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (44)
T 2eou_A 9 AKTTSECQECGKIFRHSSLLIEHQA-LHAGES 39 (44)
T ss_dssp SSCCCCCTTTCCCCSSHHHHHHHHH-HHTTSC
T ss_pred CCcCeECCCCCcccCCHHHHHHHHH-HHCCCC
Confidence 4579999999999999999999975 577654
No 87
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=97.33 E-value=7.5e-05 Score=48.50 Aligned_cols=31 Identities=29% Similarity=0.617 Sum_probs=26.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 37 (42)
T 2el5_A 7 GENPYECSECGKAFNRKDQLISHQR-THAGES 37 (42)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHG-GGCCCC
T ss_pred CCCCccCCCcChhhCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999975 576654
No 88
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.33 E-value=6.8e-05 Score=49.91 Aligned_cols=31 Identities=26% Similarity=0.545 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2emf_A 9 GGKHFECTECGKAFTRKSTLSMHQK-IHTGEK 39 (46)
T ss_dssp SSCCEECSSSCCEESCHHHHHHHGG-GTSCSS
T ss_pred CCCCeECCCCCchhCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999976 577654
No 89
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.33 E-value=0.00013 Score=48.26 Aligned_cols=31 Identities=19% Similarity=0.490 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 7 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 37 (43)
T 2yrm_A 7 GNGAFFCNECDCRFSEEASLKRHTL-QTHSDK 37 (43)
T ss_dssp SSCCBCCSSSCCCBSSHHHHHHHHH-HHTCTT
T ss_pred CCCCEECCCCCCeeCChHHHHHHHH-hhCCCC
Confidence 4579999999999999999999975 577664
No 90
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.33 E-value=8.4e-05 Score=49.46 Aligned_cols=31 Identities=35% Similarity=0.590 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2em4_A 9 GQRPYECIECGKAFKTKSSLICHRR-SHTGEK 39 (46)
T ss_dssp CSSSEECSSSCCEESSHHHHHHHHH-HHSSSS
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999975 687664
No 91
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.33 E-value=6.6e-05 Score=49.36 Aligned_cols=31 Identities=23% Similarity=0.407 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (44)
T 2emb_A 9 TRKRYECSKCQATFNLRKHLIQHQK-THAAKS 39 (44)
T ss_dssp CCSSEECTTTCCEESCHHHHHHHGG-GGCCCC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999985 687654
No 92
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.32 E-value=9e-05 Score=49.15 Aligned_cols=31 Identities=32% Similarity=0.705 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|. ++|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~-~~H~~~k 39 (46)
T 2ytn_A 9 GKKPYKCNECGKVFTQNSHLARHR-GIHTGEK 39 (46)
T ss_dssp CCSSCBCTTTCCBCSSHHHHHHHG-GGTSCCC
T ss_pred CCcCeECCCCCCeeCCHHHHHHHh-hhcCCCC
Confidence 468999999999999999999996 4687664
No 93
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.32 E-value=0.00013 Score=48.44 Aligned_cols=32 Identities=31% Similarity=0.628 Sum_probs=27.3
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..+||.|++||+.|.+...|.+|.+ +|..|+.
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k~ 40 (46)
T 2em7_A 9 GEKPYKCEECGKGFICRRDLYTHHM-VHTGEKP 40 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHGG-GGTTCCC
T ss_pred CCcCccCCCccchhCCHHHHHHHHH-HhCCCCC
Confidence 4579999999999999999999964 6876653
No 94
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.32 E-value=0.00011 Score=48.78 Aligned_cols=31 Identities=35% Similarity=0.820 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytj_A 9 GEKPYICAECGKAFTIRSNLIKHQK-IHTKQK 39 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHH-HTSCCC
T ss_pred CCcCeECCCCChhhCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999975 687664
No 95
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=97.32 E-value=0.00013 Score=46.79 Aligned_cols=30 Identities=27% Similarity=0.630 Sum_probs=25.8
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|.+ ||+.|.+...|.+|.+ +|..|
T Consensus 5 ~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~e 36 (37)
T 1va1_A 5 KKKQHICHIQGCGKVYGKTSHLRAHLR-WHTGE 36 (37)
T ss_dssp SCCCEECCSTTCCCEESCHHHHHHHHH-HHHTT
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence 457999996 9999999999999976 57765
No 96
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.32 E-value=8.6e-05 Score=49.07 Aligned_cols=31 Identities=23% Similarity=0.439 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2epw_A 9 GEKPCKCTECGKAFCWKSQLIMHQR-THVDDK 39 (46)
T ss_dssp CCCSEECSSSCCEESSSHHHHHHHH-HCCSCC
T ss_pred CCCCeeCCCCCCccCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999985 587664
No 97
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=97.32 E-value=6.8e-05 Score=52.01 Aligned_cols=31 Identities=29% Similarity=0.656 Sum_probs=26.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|++||+.|.+...|.+|.+.+|..+
T Consensus 27 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~ 57 (60)
T 2adr_A 27 NEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57 (60)
T ss_dssp SSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred CCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence 3468999999999999999999988888754
No 98
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.32 E-value=9.7e-05 Score=48.82 Aligned_cols=31 Identities=29% Similarity=0.534 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eop_A 9 GEKPHECRECGKSFSFNSQLIVHQR-IHTGEN 39 (46)
T ss_dssp CCCSCBCTTTCCBCSSHHHHHHHHT-TTTTSC
T ss_pred CCCCeeCCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999975 487664
No 99
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.31 E-value=9.6e-05 Score=48.85 Aligned_cols=31 Identities=29% Similarity=0.790 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eme_A 9 GEKPYVCDYCGKAFGLSAELVRHQR-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHG-GGCCCS
T ss_pred CCCCeECCCCChhhCCHHHHHHHHH-hcCCCC
Confidence 4579999999999999999999985 687654
No 100
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.31 E-value=0.00012 Score=48.32 Aligned_cols=32 Identities=31% Similarity=0.528 Sum_probs=27.2
Q ss_pred CCCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
....||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eq4_A 8 TGEKLYNCKECGKSFSRAPCLLKHER-LHSGEK 39 (46)
T ss_dssp SCCCCCCBTTTTBCCSCHHHHHHHHH-HCCSSS
T ss_pred CCCCCeECCCCCCccCchHHHHHHHH-hcCCCC
Confidence 35689999999999999999999975 577654
No 101
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.31 E-value=5.6e-05 Score=50.09 Aligned_cols=31 Identities=26% Similarity=0.672 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (45)
T 2epu_A 9 GQKPFECTHCGKSFRAKGNLVTHQR-IHTGEK 39 (45)
T ss_dssp SCCSEEETTTTEEESSHHHHHHHHT-TTSSCC
T ss_pred CCcCccCCCCCCccCChHHHHHHHH-HhCCCC
Confidence 4579999999999999999999965 687664
No 102
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.31 E-value=8.2e-05 Score=49.52 Aligned_cols=31 Identities=26% Similarity=0.537 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|. ++|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~~ 39 (46)
T 2em5_A 9 STKSHQCHECGRGFTLKSHLNQHQ-RIHTGEK 39 (46)
T ss_dssp CSCSEECSSSCCEESSHHHHHHHH-TTTSCSC
T ss_pred CCCCeECCcCCCccCCHHHHHHHH-HHhCCCC
Confidence 467999999999999999999997 4587664
No 103
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.30 E-value=0.00012 Score=48.42 Aligned_cols=31 Identities=26% Similarity=0.580 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2emm_A 9 GERPHKCNECGKSFIQSAHLIQHQR-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-HHSCCC
T ss_pred CCCCeeCCCCChhhCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999975 587654
No 104
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.30 E-value=8.9e-05 Score=54.10 Aligned_cols=31 Identities=16% Similarity=0.334 Sum_probs=23.2
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..||.|.+||+.|.+...|.+|.+..|..++
T Consensus 36 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~ 66 (78)
T 2d9h_A 36 ALRFPCEFCGKRFEKPDSVAAHRSKSHPALL 66 (78)
T ss_dssp TCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred CcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence 4577777777777777777777777777664
No 105
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.30 E-value=0.00015 Score=48.12 Aligned_cols=31 Identities=29% Similarity=0.658 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2emp_A 9 GVKPYMCNECGKAFSVYSSLTTHQV-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESCHHHHHHHHH-HHHCCS
T ss_pred CCcCeECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999976 587654
No 106
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.30 E-value=0.00011 Score=48.95 Aligned_cols=31 Identities=39% Similarity=0.762 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2em8_A 9 GEKPYKCVECGKGYKRRLDLDFHQR-VHTGEK 39 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHHH-HHHCCC
T ss_pred CCCCeECcccCchhCCHHHHHHHHH-HHcCCC
Confidence 4679999999999999999999986 587664
No 107
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.30 E-value=0.00012 Score=48.62 Aligned_cols=31 Identities=26% Similarity=0.666 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eoq_A 9 GEKPFKCDICGKSFCGRSRLNRHSM-VHTAEK 39 (46)
T ss_dssp SSCSCCCSSSCCCCSSHHHHHHHHH-HTTCCC
T ss_pred CCCCcCCCcCCchhCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999965 687664
No 108
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.29 E-value=7.3e-05 Score=49.59 Aligned_cols=31 Identities=32% Similarity=0.708 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~F~~~~~L~~H~~-~H~~~k 39 (46)
T 2eq0_A 9 GEKPYKCHECGKVFRRNSHLARHQL-IHTGEK 39 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHT-TTCCCC
T ss_pred CCCCeECCCCCchhCCHHHHHHHHH-HcCCCC
Confidence 4689999999999999999999965 587664
No 109
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=97.29 E-value=0.00011 Score=48.64 Aligned_cols=31 Identities=32% Similarity=0.636 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2em9_A 9 GEKPYNCKECGKSFRWASCLLKHQR-VHSGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHGG-GGTSCC
T ss_pred CCcCeECCccccccCChHHHHHHHH-HhCCCC
Confidence 4579999999999999999999964 587664
No 110
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.29 E-value=8.2e-05 Score=49.18 Aligned_cols=31 Identities=32% Similarity=0.814 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2yrj_A 9 GEKPYRCGECGKAFAQKANLTQHQR-IHTGEK 39 (46)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHT-TTSSCC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999975 687654
No 111
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.29 E-value=0.0001 Score=48.70 Aligned_cols=31 Identities=29% Similarity=0.732 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytr_A 9 GEKPYKCNECGKAFSQTSKLARHQR-IHTGEK 39 (46)
T ss_dssp SCCTTCCTTTCCCCSSHHHHHHHHT-TTTTCS
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHH-hcCCCC
Confidence 4689999999999999999999975 587654
No 112
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.29 E-value=9.9e-05 Score=49.09 Aligned_cols=31 Identities=19% Similarity=0.459 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhh-hH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHER-ER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHER-ER 184 (417)
...||.|.+||+.|.+...|.+|. .+|.. |+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~-~~H~~~~~ 40 (46)
T 2eoy_A 9 KEKCFKCNKCEKTFSCSKYLTQHE-RIHTRGVK 40 (46)
T ss_dssp CSCCEECSSSCCEESSSHHHHHHH-TTCCSCCT
T ss_pred CCCCEECcCCCCcCCCHHHHHHHH-HHcCCCCC
Confidence 468999999999999999999997 46876 54
No 113
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.29 E-value=0.0001 Score=48.83 Aligned_cols=31 Identities=29% Similarity=0.572 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2enc_A 9 GEKPFKCEECGKGFYTNSQCYSHQR-SHSGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-HSCCSS
T ss_pred CCCCcCCCCCCCcCCChHHHHHHHH-HhCCCC
Confidence 4579999999999999999999975 587664
No 114
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.28 E-value=9.9e-05 Score=49.10 Aligned_cols=31 Identities=29% Similarity=0.625 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytq_A 9 GEKPYGCSECGKAFSSKSYLIIHMR-THSGEK 39 (46)
T ss_dssp CCCSCBCSSSCCBCSCHHHHHHHHT-TTCCSC
T ss_pred CCCCcCCCccChhhCChHHHHHHHH-HhCCCC
Confidence 4689999999999999999999975 587664
No 115
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.28 E-value=8.5e-05 Score=49.09 Aligned_cols=31 Identities=32% Similarity=0.788 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2yts_A 9 GEKPYICNECGKSFIQKSHLNRHRR-IHTGEK 39 (46)
T ss_dssp SCCSEECSSSCCEESSHHHHHHHGG-GTSSCC
T ss_pred CCcCEECCCCChhhCChHHHHHHHH-hcCCCC
Confidence 4679999999999999999999975 687664
No 116
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.28 E-value=7.8e-05 Score=49.28 Aligned_cols=31 Identities=29% Similarity=0.673 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 39 (46)
T 2eoe_A 9 GEKPYKCNECGKVFTQNSHLANHQR-IHTGVK 39 (46)
T ss_dssp CCCSSEETTTTEECSSHHHHHHHHG-GGSCCC
T ss_pred CCCCeECCCcChhhCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999975 687664
No 117
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=97.28 E-value=0.00011 Score=48.90 Aligned_cols=31 Identities=32% Similarity=0.692 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2el6_A 9 GVNPYKCSQCEKSFSGKLRLLVHQR-MHTREK 39 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHHG-GGCCSS
T ss_pred CCCCeECCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999964 587664
No 118
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.28 E-value=9.4e-05 Score=49.06 Aligned_cols=31 Identities=29% Similarity=0.718 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eq2_A 9 GGKPYQCNECGKAFSQTSKLARHQR-VHTGEK 39 (46)
T ss_dssp SSCSSSCCSSCCCCSSHHHHHHHGG-GGCCCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999975 687664
No 119
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.27 E-value=0.00012 Score=48.55 Aligned_cols=31 Identities=29% Similarity=0.695 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ytd_A 9 GEKPYKCSECGKAFHRHTHLNEHRR-IHTGYR 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-HHTCCC
T ss_pred CCcCeECCCCCCeeCChHHHHHHHH-HcCCCC
Confidence 4579999999999999999999964 687664
No 120
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.27 E-value=0.0001 Score=48.83 Aligned_cols=31 Identities=29% Similarity=0.688 Sum_probs=27.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2yu8_A 9 GEKPYKCNECGKVFTQNSHLARHRR-VHTGGK 39 (46)
T ss_dssp CCSSEECSSSCCEESSSHHHHHHTH-HHHSCC
T ss_pred CCCCeECCcCCchhCCHHHHHHHHH-hcCCCC
Confidence 4689999999999999999999975 687664
No 121
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.27 E-value=0.0001 Score=48.87 Aligned_cols=31 Identities=32% Similarity=0.748 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ene_A 9 GEKPYKCNECGKVFRHNSYLSRHQR-IHTGEK 39 (46)
T ss_dssp CSSSEECSSSCCEESSHHHHHHHHT-TTCCCC
T ss_pred CCCCeECCCCCchhCChHHHHHHHh-hcCCCC
Confidence 4679999999999999999999976 587654
No 122
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.27 E-value=6.8e-05 Score=49.59 Aligned_cols=31 Identities=26% Similarity=0.647 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2eq3_A 9 GEKPYECNQCGKAFSVRSSLTTHQA-IHTGKK 39 (46)
T ss_dssp CCCSSEETTTTEECSSHHHHHHHHT-TSCCCC
T ss_pred CCCCeECCCCChhhCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999975 676654
No 123
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.26 E-value=0.00012 Score=48.72 Aligned_cols=31 Identities=29% Similarity=0.823 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2em2_A 9 GEKPFKCKECGKAFRQNIHLASHLR-IHTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-HHCCCC
T ss_pred CCCCEECCcCCchhCCHHHHHHHHH-HhCCCC
Confidence 5689999999999999999999976 577654
No 124
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.26 E-value=5.8e-05 Score=48.87 Aligned_cols=31 Identities=26% Similarity=0.595 Sum_probs=26.5
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 8 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 38 (42)
T 2ytb_A 8 GEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSG 38 (42)
T ss_dssp SCCSBCCTTTTCCBSSHHHHHTTGG-GTSCCS
T ss_pred CCCCeeCCCccchhCCHHHHHHHHH-HhCCCC
Confidence 4679999999999999999999975 576554
No 125
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.26 E-value=8e-05 Score=48.80 Aligned_cols=31 Identities=29% Similarity=0.561 Sum_probs=26.5
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (44)
T 2eoj_A 9 GENPYECCECGKVFSRKDQLVSHQK-THSGQS 39 (44)
T ss_dssp SCCSCEETTTTEECSSHHHHHHHHT-TSSSSC
T ss_pred CCcCeeCCCCCCccCCHHHHHHHHH-HcCCCC
Confidence 4579999999999999999999975 576654
No 126
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.25 E-value=0.0001 Score=48.82 Aligned_cols=31 Identities=29% Similarity=0.670 Sum_probs=27.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ep0_A 9 GEKPYKCDVCHKSFRYGSSLTVHQR-IHTGEK 39 (46)
T ss_dssp TCCSEECSSSCCEESSHHHHHHHHT-TTSSSC
T ss_pred CCCCeeCcccCcccCChHHHHHHHH-HhCCCC
Confidence 5679999999999999999999965 687664
No 127
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.24 E-value=9.6e-05 Score=49.00 Aligned_cols=31 Identities=29% Similarity=0.611 Sum_probs=26.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|.+||+.|.+...|.+|.+. |..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~k 39 (46)
T 2en6_A 9 GEKPYGCNECGKTFSQKSILSAHQRT-HTGEK 39 (46)
T ss_dssp SSCCEEETTTTEEESSHHHHHHHHHH-HSSCC
T ss_pred CCcCeECCCCCcccCchHHHHHHHHH-cCCCC
Confidence 45799999999999999999999874 77654
No 128
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=97.24 E-value=9.7e-05 Score=45.04 Aligned_cols=28 Identities=29% Similarity=0.800 Sum_probs=24.0
Q ss_pred CCeecc--cCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICG--VCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~--VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|. .||+.|.+...|.+|.+ +|..|
T Consensus 1 kp~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 30 (31)
T 1sp2_A 1 RPFMCTWSYCGKRFTRSDELQRHKR-THTGE 30 (31)
T ss_dssp CCCBCCSTTCCCBCSSHHHHHHHHT-TTSCC
T ss_pred CCcCCcCCCCCcccCCHhHHHHHHH-HhcCC
Confidence 489998 99999999999999975 47654
No 129
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.22 E-value=6e-05 Score=49.58 Aligned_cols=31 Identities=29% Similarity=0.678 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~F~~~~~L~~H~~-~H~~~~ 39 (44)
T 2eox_A 9 DSKSYNCNECGKAFTRIFHLTRHQK-IHTRKS 39 (44)
T ss_dssp CCCCEEETTTTEEESSSHHHHTTHH-HHCCCC
T ss_pred CCCCeECcccCcccCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999986 576554
No 130
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.21 E-value=0.00021 Score=54.63 Aligned_cols=35 Identities=23% Similarity=0.365 Sum_probs=29.8
Q ss_pred cCccCCCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 148 RGVAVPNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 148 ~G~v~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.|-....+||.|..||+.|.+...|.+|.+. |..+
T Consensus 5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~-Htg~ 39 (66)
T 2epp_A 5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQ-HGVT 39 (66)
T ss_dssp SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHH-HTTT
T ss_pred CCCCCCccCcCCCCCCCccCCHHHHHhhhhh-hCCC
Confidence 4455677999999999999999999999875 8765
No 131
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.21 E-value=0.00013 Score=48.17 Aligned_cols=31 Identities=26% Similarity=0.562 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2ytf_A 9 GEKPFECSECQKAFNTKSNLIVHQR-THTGEK 39 (46)
T ss_dssp CCCSEECSSSCCEESSHHHHHHHHH-TSCSSS
T ss_pred CCCCcCCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 4689999999999999999999975 577654
No 132
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.21 E-value=0.00012 Score=48.44 Aligned_cols=32 Identities=28% Similarity=0.588 Sum_probs=27.4
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..+||.|.+||+.|.....|.+|.+ +|..|+.
T Consensus 7 ~~k~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~ 38 (45)
T 2epq_A 7 GEKPYSCPVCGLRFKRKDRMSYHVR-SHDGSVG 38 (45)
T ss_dssp SCCSSEETTTTEECSCHHHHHHHHH-HHSCCCC
T ss_pred CCCCCcCCCCCcccCCHHHHHHHHH-HccCCCC
Confidence 4579999999999999999999986 4776654
No 133
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.20 E-value=0.00015 Score=47.98 Aligned_cols=31 Identities=23% Similarity=0.375 Sum_probs=26.5
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2yso_A 9 REKSHQCRECGEIFFQYVSLIEHQV-LHMGQK 39 (46)
T ss_dssp CCCCEECTTTCCEESSHHHHHHHHH-HHSCCS
T ss_pred CCCCEEccccChhhCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999975 576554
No 134
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.19 E-value=8.1e-05 Score=49.36 Aligned_cols=31 Identities=35% Similarity=0.788 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..+||.|++||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2ysp_A 9 GEKPYKCEKCGKGYNSKFNLDMHQK-VHTGER 39 (46)
T ss_dssp SCCSEEETTTTEEESCHHHHHHHHT-TSCSCC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHH-hhCCCC
Confidence 4579999999999999999999976 577654
No 135
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.15 E-value=0.00019 Score=52.34 Aligned_cols=31 Identities=26% Similarity=0.521 Sum_probs=25.4
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
..+||.|++||+.|.+...|.+|.++.|..+
T Consensus 12 ~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~ 42 (77)
T 2ct1_A 12 GEKPYECYICHARFTQSGTMKMHILQKHTEN 42 (77)
T ss_dssp CCCSEECTTTCCEESCHHHHHHHHHHHSSSS
T ss_pred CCCCeECCCcCchhCCHHHHHHHHHHhcCCC
Confidence 4578888888888888888888888888754
No 136
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.14 E-value=0.00022 Score=48.90 Aligned_cols=32 Identities=19% Similarity=0.342 Sum_probs=26.6
Q ss_pred cCCCCCeeccc--CCCCCCChHHHHHHHHHhhhhh
Q 014830 151 AVPNDPYICGV--CGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 151 v~p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERE 183 (417)
-..++||.|.+ ||+.|.+...|++|.+ +|..|
T Consensus 4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r-~Htg~ 37 (38)
T 2eln_A 4 GSSGILLKCPTDGCDYSTPDKYKLQAHLK-VHTAL 37 (38)
T ss_dssp SSCCCCEECSSSSCCCEESCHHHHHHHHH-HHSCC
T ss_pred CCCCCCCCCCCCCCCCccCCHHHHHHHHH-hcCCC
Confidence 34568999987 9999999999999975 57644
No 137
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=97.13 E-value=0.00015 Score=57.21 Aligned_cols=55 Identities=11% Similarity=0.184 Sum_probs=40.7
Q ss_pred ccCCCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 150 VAVPNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 150 ~v~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
+-.+.++|.|++||+.|.+...|.+|.+ +|..|+.=.+..+... ..++..|...+
T Consensus 22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~-F~~~~~L~~H~ 76 (85)
T 2lv2_A 22 LSASAECHLCPVCGESFASKGAQERHLR-LLHAAQVFPCKYCPAT-FYSSPGLTRHI 76 (85)
T ss_dssp SCCCCTTEECTTSCCEESSHHHHHHHHH-TTSCSSSEECTTSSCE-ESSHHHHHHHH
T ss_pred CCCCCCCEECCCCCCCcCcHHHHhhhhh-hccCCCccCCCCCCCE-eCCHHHHHHhC
Confidence 3346789999999999999999999987 5777776666655443 55555665543
No 138
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.13 E-value=0.0002 Score=57.63 Aligned_cols=38 Identities=21% Similarity=0.377 Sum_probs=32.7
Q ss_pred ccCCCCCeeccc--CCCCCCChHHHHHHHHHhhhhhHHHH
Q 014830 150 VAVPNDPYICGV--CGRKCKTNLDLKKHFKQLHERERQKK 187 (417)
Q Consensus 150 ~v~p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER~KR 187 (417)
..+.++||.|.. ||+.|.....|.+|.+.+|+.|+...
T Consensus 21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~ 60 (73)
T 1x3c_A 21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAF 60 (73)
T ss_dssp SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCC
T ss_pred cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcc
Confidence 345778999975 99999999999999999999887643
No 139
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=97.11 E-value=0.00018 Score=47.48 Aligned_cols=31 Identities=23% Similarity=0.434 Sum_probs=26.8
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (46)
T 2el4_A 9 GVKPYGCSQCAKTFSLKSQLIVHQR-SHTGVK 39 (46)
T ss_dssp CCCSEECSSSSCEESSHHHHHHHGG-GSSSCC
T ss_pred CCCceECCCCCchhCCHHHHHHHHH-HhCCCC
Confidence 4579999999999999999999974 587664
No 140
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=97.10 E-value=0.00014 Score=52.16 Aligned_cols=31 Identities=26% Similarity=0.578 Sum_probs=20.0
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
.+||.|.+||+.|.+...|.+|.+. |..++.
T Consensus 7 ~~~~~C~~C~k~f~~~~~L~~H~~~-H~~~~~ 37 (70)
T 1x5w_A 7 GHPEKCSECSYSCSSKAALRIHERI-HCTDRP 37 (70)
T ss_dssp CCSEECSSSSCEESSHHHHHHHHGG-GCCSCS
T ss_pred CCCeECCCCCcccCCHHHHHHHHHH-cCCCCC
Confidence 4567777777777777777777654 655544
No 141
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=97.10 E-value=1.2e-05 Score=50.38 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=25.1
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
+||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 1 kp~~C~~C~k~f~~~~~L~~H~~-~H~~~k 29 (32)
T 2kfq_A 1 YAFACPACPKRFMRSDALSKHIK-TAFIVV 29 (32)
T ss_dssp CCSSSSSSCTTHHHHHTTSSSTT-SSSSSS
T ss_pred CCCCCCCCCcccCCHHHHHHHHH-HHccCC
Confidence 48999999999999999999974 687664
No 142
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.10 E-value=0.00027 Score=44.85 Aligned_cols=30 Identities=27% Similarity=0.631 Sum_probs=25.8
Q ss_pred CCCeeccc--CCCCCCChHHHHHHHHHhhhhhH
Q 014830 154 NDPYICGV--CGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 154 ~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER 184 (417)
..||.|.+ ||+.|.+...|.+|.+ +|..|+
T Consensus 4 ~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k 35 (38)
T 1bhi_A 4 DKPFLCTAPGCGQRFTNEDHLAVHKH-KHEMTL 35 (38)
T ss_dssp CCCEECCCTTTCCEESSHHHHHHHHH-HHHTTT
T ss_pred CcceECCCCCCCcccCCHHHHHHHHH-HhCCCC
Confidence 57999995 9999999999999975 577654
No 143
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.09 E-value=0.00015 Score=48.09 Aligned_cols=31 Identities=29% Similarity=0.736 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~~ 39 (46)
T 2en1_A 9 GEKPFKCEECGKRFTQNSQLHSHQR-VHTGEK 39 (46)
T ss_dssp CCCSEEETTTTEEESSHHHHHHHGG-GGSCCC
T ss_pred CCCCeeCCCCCcccCCHHHHHHHHH-HcCCCC
Confidence 4679999999999999999999974 577654
No 144
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=97.08 E-value=0.00022 Score=53.12 Aligned_cols=29 Identities=38% Similarity=0.768 Sum_probs=24.6
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|++||+.|.+...|.+|.+++|..+
T Consensus 64 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 92 (95)
T 2yt9_A 64 KPYICQSCGKGFSRPDHLNGHIKQVHSGP 92 (95)
T ss_dssp SSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred CceECCCccchhCCHHHHHHHHHHhcCCC
Confidence 68889999999999999999988888654
No 145
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.08 E-value=0.0003 Score=48.03 Aligned_cols=27 Identities=26% Similarity=0.661 Sum_probs=23.4
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLH 180 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLH 180 (417)
..||.|++||+.|.+...|.+|.+.-|
T Consensus 30 ~~~~~C~~C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 30 EKPYKCEFCEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred CCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence 468999999999999999999988766
No 146
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.06 E-value=0.00033 Score=49.37 Aligned_cols=28 Identities=21% Similarity=0.476 Sum_probs=23.7
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
..||.|++||+.|.+...|.+|.+..|.
T Consensus 38 ~~~~~C~~C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 38 VKVYPCPFCFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred CcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence 4789999999999999999999888773
No 147
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=97.04 E-value=0.00024 Score=48.58 Aligned_cols=33 Identities=27% Similarity=0.548 Sum_probs=25.5
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKK 187 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KR 187 (417)
+.||.|++||+.|.+...|.+|.+ +|..++.-+
T Consensus 2 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~ 34 (57)
T 3uk3_C 2 SSSRECSYCGKFFRSNYYLNIHLR-THTGEKPYK 34 (57)
T ss_dssp ---CBCTTTCCBCSCHHHHHHHHH-HHHCCCCEE
T ss_pred CCCccCCCCcchhCChHHHHHHHH-HcCCCCCcC
Confidence 468999999999999999999987 477665433
No 148
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=97.03 E-value=0.00032 Score=47.92 Aligned_cols=26 Identities=19% Similarity=0.413 Sum_probs=23.7
Q ss_pred cCCCCCeecccCCCCCCChHHHHHHH
Q 014830 151 AVPNDPYICGVCGRKCKTNLDLKKHF 176 (417)
Q Consensus 151 v~p~~PY~C~VCGRkf~T~~kL~kHF 176 (417)
...++||.|..||+.|.....|++|.
T Consensus 3 ~~gekp~~C~~CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 3 LLKPARFMCLPCGIAFSSPSTLEAHQ 28 (36)
T ss_dssp SSSCCCCEETTTTEECSCHHHHHHHH
T ss_pred CCCccCeECCCCCCccCCHhHccCcC
Confidence 44568999999999999999999997
No 149
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=97.03 E-value=0.00017 Score=50.92 Aligned_cols=37 Identities=19% Similarity=0.353 Sum_probs=30.3
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhh-hhhHHHHHhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLH-ERERQKKLNR 190 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLH-ERER~KRLnr 190 (417)
..||.|++||+.|.+...|.+|.+..| ..++.-++..
T Consensus 8 ~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~ 45 (66)
T 2drp_A 8 EHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF 45 (66)
T ss_dssp TTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTT
T ss_pred CcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCC
Confidence 579999999999999999999999988 4555434433
No 150
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=97.03 E-value=0.00015 Score=47.99 Aligned_cols=31 Identities=29% Similarity=0.793 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|. ++|..|+
T Consensus 9 ~~~~~~C~~C~k~f~~~~~L~~H~-~~H~~~k 39 (46)
T 2ytg_A 9 GEKPFKCGECGKSYNQRVHLTQHQ-RVHTGEK 39 (46)
T ss_dssp SCCSEECTTTCCEESSSHHHHTTG-GGGSSCC
T ss_pred CCCCeECCCCCcccCCHHHHHHHH-HHcCCCC
Confidence 457999999999999999999996 4687654
No 151
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=97.02 E-value=0.00019 Score=48.47 Aligned_cols=32 Identities=22% Similarity=0.489 Sum_probs=27.2
Q ss_pred CCCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
....||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 8 ~~~k~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 39 (48)
T 2epr_A 8 RTRKQVACEICGKIFRDVYHLNRHKL-SHSGEK 39 (48)
T ss_dssp CCCCSEEETTTTEEESSHHHHHHHGG-GSCSCC
T ss_pred CCCcCeeCCCCCcccCCHHHHHHHHH-hcCCCC
Confidence 35679999999999999999999965 677654
No 152
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.99 E-value=0.00021 Score=52.10 Aligned_cols=30 Identities=20% Similarity=0.409 Sum_probs=27.7
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
.||.|++||+.|.+...|.+|.+..|..++
T Consensus 44 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~ 73 (77)
T 2ct1_A 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73 (77)
T ss_dssp SSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred CccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence 689999999999999999999999997654
No 153
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.89 E-value=0.00048 Score=50.60 Aligned_cols=28 Identities=39% Similarity=0.885 Sum_probs=15.1
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|++||+.|.+...|.+|.+ +|..|
T Consensus 61 ~~~~C~~C~~~f~~~~~l~~H~~-~H~~~ 88 (90)
T 1a1h_A 61 KPFACDICGRKFARSDERKRHTK-IHLRQ 88 (90)
T ss_dssp CCEECTTTCCEESSHHHHHHHHG-GGGC-
T ss_pred CCccCCCCCchhCCHHHHHHHHH-Hhccc
Confidence 45666666666666666666654 34433
No 154
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=96.88 E-value=0.00039 Score=48.10 Aligned_cols=49 Identities=20% Similarity=0.428 Sum_probs=33.6
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKER 205 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~ 205 (417)
+||.|++||+.|.+...|.+|.+. |..++.-+...+... ..++..|...
T Consensus 1 k~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~-f~~~~~l~~H 49 (60)
T 2adr_A 1 RSFVCEVCTRAFARQEHLKRHYRS-HTNEKPYPCGLCNRA-FTRRDLLIRH 49 (60)
T ss_dssp CCBCCTTTCCCBSCHHHHHHHHHT-TTSSCSEECTTTCCE-ESSHHHHHHH
T ss_pred CcCcCCCCccccCCHHHHHHHHHH-hCCCCCccCCCCCCc-cCCHHHHHHH
Confidence 489999999999999999999875 876654444333222 3344444444
No 155
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.88 E-value=0.00036 Score=53.86 Aligned_cols=31 Identities=29% Similarity=0.623 Sum_probs=26.3
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|++||+.|.+...|.+|.+..|..+
T Consensus 91 ~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~ 121 (124)
T 2dlq_A 91 GEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121 (124)
T ss_dssp SSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred CCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence 3478999999999999999999999888765
No 156
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.87 E-value=0.00044 Score=50.08 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=31.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKER 205 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~ 205 (417)
...||.|.+||+.|.+...|.+|.+ .|..++.-++..+... ..++..|...
T Consensus 14 ~~~~~~C~~C~k~f~~~~~l~~H~~-~H~~~~~~~C~~C~k~-f~~~~~L~~H 64 (74)
T 2lce_A 14 SDKPYKCDRCQASFRYKGNLASHKT-VHTGEKPYRCNICGAQ-FNRPANLKTH 64 (74)
T ss_dssp CCCSBCCTTSSCCBSCHHHHHHHHH-HHCCCCSEECTTTCCE-ESCHHHHHHH
T ss_pred CCCCeECCCCCceeCCHHHHHHHHH-HcCCCCCEECCCCCch-hCCHHHHHHH
Confidence 4568888888888888888888875 4666554444433322 3344444444
No 157
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=96.85 E-value=0.00079 Score=52.91 Aligned_cols=39 Identities=31% Similarity=0.631 Sum_probs=33.3
Q ss_pred CCCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhh
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRM 191 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL 191 (417)
....||.|.+||+.|.+...|.+|.+ +|..|+.-++.+.
T Consensus 21 ~~~kpy~C~~C~k~F~~~~~L~~H~~-~Ht~ekp~~C~~~ 59 (88)
T 1x6f_A 21 LQNSTYQCKHCDSKLQSTAELTSHLN-IHNEEFQKRAKRQ 59 (88)
T ss_dssp CCCSCEECSSSCCEESSHHHHHHHHH-HHHHHHHHHCCCC
T ss_pred CCCCCCcCCCCCCEeCCHHHHHHHHH-HhCCCCCcccchh
Confidence 35689999999999999999999975 6999988776553
No 158
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.83 E-value=0.00048 Score=49.79 Aligned_cols=32 Identities=28% Similarity=0.565 Sum_probs=21.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
.++||.|++||+.|.+...|.+|.+ +|..++.
T Consensus 11 ~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~ 42 (72)
T 1x6e_A 11 GEKPYGCVECGKAFSRSSILVQHQR-VHTGEKP 42 (72)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHH-GGGCSCC
T ss_pred CCCCccCCCCCCccCCHHHHHHHHH-hcCCCCC
Confidence 4467777777777777777777765 3554443
No 159
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=96.83 E-value=0.00046 Score=49.98 Aligned_cols=31 Identities=32% Similarity=0.804 Sum_probs=26.4
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 42 ~~~~~~C~~C~k~f~~~~~L~~H~~-~H~~~k 72 (74)
T 2lce_A 42 GEKPYRCNICGAQFNRPANLKTHTR-IHSGEK 72 (74)
T ss_dssp CCCSEECTTTCCEESCHHHHHHHHH-HHCCSC
T ss_pred CCCCEECCCCCchhCCHHHHHHHHH-hcCCCC
Confidence 3578999999999999999999985 576553
No 160
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.74 E-value=0.00074 Score=48.77 Aligned_cols=30 Identities=30% Similarity=0.574 Sum_probs=25.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|++||+.|.+...|.+|.+. |..+
T Consensus 39 ~~~~~~C~~C~~~f~~~~~L~~H~~~-H~~~ 68 (72)
T 1x6e_A 39 GEKPYKCLECGKAFSQNSGLINHQRI-HTSG 68 (72)
T ss_dssp CSCCEECSSSCCEESSHHHHHHHHHH-HHSS
T ss_pred CCCCeECCCCCcccCCHHHHHHHHHh-cCCC
Confidence 35789999999999999999999864 6544
No 161
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.71 E-value=0.0015 Score=50.44 Aligned_cols=52 Identities=17% Similarity=0.268 Sum_probs=39.3
Q ss_pred CCCCeecccCCCCCC-ChHHHHHHHHHhhhh-hHHHHHhhhhccccchhHHHHHHh
Q 014830 153 PNDPYICGVCGRKCK-TNLDLKKHFKQLHER-ERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 153 p~~PY~C~VCGRkf~-T~~kL~kHFKQLHER-ER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
..+||.|.+||+.|. +...|++|.+. |.. ++.-++..+... ..++..|...+
T Consensus 21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~-h~~~~~~~~C~~C~k~-F~~~~~L~~H~ 74 (98)
T 2gqj_A 21 ERGEAVCPTCNVVTRKTLVGLKKHMEV-CQKLQDALKCQHCRKQ-FKSKAGLNYHT 74 (98)
T ss_dssp TTSCCCCTTTCCCCSSCSHHHHHHHHH-HHHHHHHHSCSSSCCC-CSCHHHHHHHH
T ss_pred cCCCcCCCCCCCChhhhHHHHHHHHHH-HcCCCCCEECCCCCCc-cCCHHHHHHHH
Confidence 457999999999999 99999999965 655 766666655433 56666666665
No 162
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.71 E-value=0.00054 Score=46.79 Aligned_cols=24 Identities=42% Similarity=0.700 Sum_probs=17.2
Q ss_pred CCCeecccCCCCCCChHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
..||.|++||+.|.+...|.+|.+
T Consensus 27 ~~~~~C~~C~~~f~~~~~l~~H~~ 50 (57)
T 1bbo_A 27 VRPYHCTYCNFSFKTKGNLTKHMK 50 (57)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHH
T ss_pred CCCccCCCCCchhcCHHHHHHHHH
Confidence 456777777777777777777764
No 163
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.70 E-value=0.00066 Score=53.36 Aligned_cols=28 Identities=21% Similarity=0.547 Sum_probs=18.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHER 182 (417)
+||.|.+||+.|.+...|++|...+|..
T Consensus 61 k~~~C~~Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 61 EMFTCHHCGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp CCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred CCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence 5677777777777777777775556653
No 164
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.69 E-value=0.00034 Score=53.85 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=17.3
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.||.|.+||+.|.+...|.+|.+.+|..|
T Consensus 68 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~ 96 (107)
T 1wjp_A 68 KKLTCLECMRTFKSSFSIWRHQVEVHNQN 96 (107)
T ss_dssp GGGEEGGGTEECSSHHHHHHHHHHTSCCC
T ss_pred CCccCccccchhCCHHHHHHHHHHHcCCC
Confidence 45666666666666666666666555544
No 165
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=96.62 E-value=0.00057 Score=46.26 Aligned_cols=30 Identities=20% Similarity=0.596 Sum_probs=25.6
Q ss_pred CCCCeecc--cCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICG--VCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~--VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.+.||.|. .||+.|.....|.+|.+ +|..|
T Consensus 15 ~~k~~~C~~~~C~k~F~~~~~L~~H~~-~H~~e 46 (47)
T 1ncs_A 15 PDKTFECLFPGCTKTFKRRYNIRSHIQ-THLED 46 (47)
T ss_dssp TTTEEECCCTTCCCEECSSSSHHHHHH-HHTTT
T ss_pred CCCCeECCCCCCCCccCCHHHHHHHHH-HccCC
Confidence 45799996 79999999999999976 57765
No 166
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=96.61 E-value=0.00086 Score=39.38 Aligned_cols=24 Identities=33% Similarity=0.653 Sum_probs=21.7
Q ss_pred CCeecc--cCCCCCCChHHHHHHHHH
Q 014830 155 DPYICG--VCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 155 ~PY~C~--VCGRkf~T~~kL~kHFKQ 178 (417)
+||.|. .||+.|.+...|.+|.+.
T Consensus 1 k~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 1 MVYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CCEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCCcCCcCcCccCCHHHHHHHHHH
Confidence 479999 999999999999999753
No 167
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.60 E-value=0.0012 Score=47.22 Aligned_cols=29 Identities=31% Similarity=0.705 Sum_probs=25.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
...||.|.+||+.|.+...|.+|.+.-|.
T Consensus 34 ~~~~~~C~~C~~~f~~~~~L~~H~~~h~~ 62 (70)
T 1x5w_A 34 TDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62 (70)
T ss_dssp CSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred CCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence 45789999999999999999999876553
No 168
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.52 E-value=0.00075 Score=49.17 Aligned_cols=27 Identities=30% Similarity=0.688 Sum_probs=15.7
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHER 182 (417)
.||.|++||+.|.+...|.+|.+ +|..
T Consensus 45 ~~~~C~~C~~~f~~~~~L~~H~~-~H~~ 71 (77)
T 2cot_A 45 KPYKCDECGKAFIQRSHLIGHHR-VHTG 71 (77)
T ss_dssp CSEECSSSCCEESSHHHHHHHGG-GSCC
T ss_pred cCeeCCCCCCccCCHHHHHHHHH-HhCC
Confidence 45666666666666666666653 3443
No 169
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.49 E-value=0.0015 Score=50.47 Aligned_cols=31 Identities=19% Similarity=0.370 Sum_probs=27.3
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.+.||.|.+||+.|.+...|.+|.+..|..+
T Consensus 77 ~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~ 107 (115)
T 2dmi_A 77 AQKVLKCMYCGHSFESLQDLSVHMIKTKHYQ 107 (115)
T ss_dssp CCSSCBCSSSCCBCSSHHHHHHHHHHTTTTT
T ss_pred CCcceECCCCCCccCCHHHHHHHHHHhCCcc
Confidence 4579999999999999999999998877543
No 170
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.47 E-value=0.0019 Score=46.96 Aligned_cols=31 Identities=29% Similarity=0.702 Sum_probs=25.4
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|.+||+.|.+...|.+|.+..|..+
T Consensus 12 ~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~ 42 (86)
T 1x6h_A 12 GEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 42 (86)
T ss_dssp CCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred CCCCCcCCCCCCccCCHHHHHHHHHHhcCCc
Confidence 4578999999999999999999988877653
No 171
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.45 E-value=0.00069 Score=55.06 Aligned_cols=32 Identities=28% Similarity=0.440 Sum_probs=21.2
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..||.|.+||+.|.+...|.+|...+|..|+.
T Consensus 48 ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekp 79 (102)
T 2ghf_A 48 NSSYVCVECNFLTKRYDALSEHNLKYHPGEEN 79 (102)
T ss_dssp SCCEEETTTTEEESSTHHHHTHHHHTSTTCCC
T ss_pred CCCcCCCCCCcccCCHHHHHHHHHHhcCCCCC
Confidence 35677777777777777777775566666654
No 172
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=96.44 E-value=0.0014 Score=47.03 Aligned_cols=24 Identities=25% Similarity=0.686 Sum_probs=21.5
Q ss_pred CCCeecccCCCCCCChHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
..||.|++||+.|.+...|.+|.+
T Consensus 47 ~~~~~C~~C~~~f~~~~~l~~H~~ 70 (73)
T 1f2i_G 47 QKPFQCRICMRNFSRSDHLTTHIR 70 (73)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHT
T ss_pred CCCeECCCCCchhCCHHHHHHHHH
Confidence 478999999999999999999975
No 173
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=96.42 E-value=0.0014 Score=44.66 Aligned_cols=27 Identities=37% Similarity=0.668 Sum_probs=25.0
Q ss_pred CeecccCCCCCCChHHHHHHHHHhhhh
Q 014830 156 PYICGVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 156 PY~C~VCGRkf~T~~kL~kHFKQLHER 182 (417)
||.|.+||+.|.+...|.+|.+.-+..
T Consensus 1 p~~C~~C~~~f~~~~~l~~H~~~h~~~ 27 (57)
T 1bbo_A 1 KYICEECGIRXKKPSMLKKHIRTHTDV 27 (57)
T ss_dssp CCBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred CCcCCCCcCcCCCHHHHHHHHHhcCCC
Confidence 799999999999999999999987774
No 174
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.41 E-value=0.0015 Score=47.46 Aligned_cols=52 Identities=15% Similarity=0.259 Sum_probs=35.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhh---hHHHHHhhhhccccchhHHHHHHh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHER---ERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHER---ER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
..+||.|.+||+.|.+...|.+|.+ +|.. ++.-++..+.. ...++..|...+
T Consensus 4 ~~k~~~C~~C~k~f~~~~~L~~H~~-~h~~~~~~~~~~C~~C~k-~f~~~~~L~~H~ 58 (78)
T 2d9h_A 4 GSSGLQCEICGFTCRQKASLNWHQR-KHAETVAALRFPCEFCGK-RFEKPDSVAAHR 58 (78)
T ss_dssp SCCCEECSSSCCEESSHHHHHHHHH-HHHHHTTTCCEECTTTCC-EESSHHHHHHHH
T ss_pred CCcCeECCCCCCeeCCHHHHHHHHH-HhhccCCCcccCCCCCCc-hhCCHHHHHHHH
Confidence 4589999999999999999999986 4654 33333333322 244555555554
No 175
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.38 E-value=0.00098 Score=48.54 Aligned_cols=52 Identities=23% Similarity=0.354 Sum_probs=36.0
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
...||.|.+||+.|.+...|.+|.+ +|..++.-++..+.. ...++..|...+
T Consensus 15 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~-~f~~~~~L~~H~ 66 (77)
T 2cot_A 15 ERRRYKCDECGKSFSHSSDLSKHRR-THTGEKPYKCDECGK-AFIQRSHLIGHH 66 (77)
T ss_dssp CSCSSBCSSSCCBCSCHHHHHHHHT-TTCCSCSEECSSSCC-EESSHHHHHHHG
T ss_pred CCCCEECCCCCcccCCHHHHHHHHH-HcCCCcCeeCCCCCC-ccCCHHHHHHHH
Confidence 4579999999999999999999986 577665433433322 244455555544
No 176
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=96.36 E-value=0.0015 Score=48.77 Aligned_cols=27 Identities=33% Similarity=0.762 Sum_probs=18.7
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLH 180 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLH 180 (417)
..||.|++||+.|.+...|.+|.+.-|
T Consensus 29 ~~~~~C~~C~k~f~~~~~L~~H~~~h~ 55 (88)
T 1llm_C 29 EKPFACDICGRKFARSDERKRHRDIQH 55 (88)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred CCCccCCCCCCccCCHHHHHHHHHHhC
Confidence 457777777777777777777766655
No 177
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.36 E-value=0.001 Score=51.06 Aligned_cols=62 Identities=29% Similarity=0.441 Sum_probs=33.6
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHhhccchHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERYISGNDKYNEAA 217 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~a~k~~KY~~AA 217 (417)
..||.|++||+.|.+...|.+|.+ +|..++.-++..+... ..++..|...+......|..+.
T Consensus 35 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~-f~~~~~l~~H~~~~~~~~~~~~ 96 (110)
T 2csh_A 35 LRPYGCGVCGKKFKMKHHLVGHMK-IHTGIKPYECNICAKR-FMWRDSFHRHVTSCTKSYEAAK 96 (110)
T ss_dssp CCSEECTTTSCEESSSHHHHHHHT-TTCCCCCEECSSSCCE-ESCHHHHHHHHHHHHHHHHHHH
T ss_pred CcCccCCCCCcccCCHHHHHHHHH-HcCCCCCeeCCCCcch-hcCHHHHHHHHHHccccccchh
Confidence 356777777777777777777754 4544443333333222 4445555555555445555443
No 178
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.33 E-value=0.0032 Score=48.26 Aligned_cols=35 Identities=17% Similarity=0.415 Sum_probs=29.9
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKK 187 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KR 187 (417)
...||.|++||+.|.+...|.+|.+.-|.......
T Consensus 62 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~ 96 (110)
T 2csh_A 62 GIKPYECNICAKRFMWRDSFHRHVTSCTKSYEAAK 96 (110)
T ss_dssp CCCCEECSSSCCEESCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCeeCCCCcchhcCHHHHHHHHHHccccccchh
Confidence 45789999999999999999999998887655543
No 179
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=96.24 E-value=0.0018 Score=49.15 Aligned_cols=29 Identities=28% Similarity=0.570 Sum_probs=17.9
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
..||.|.+||+.|.+...|.+|.+ +|..|
T Consensus 71 ~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~ 99 (106)
T 2ee8_A 71 EKPFKCQECGKGFCQSRTLAVHKT-LHMQT 99 (106)
T ss_dssp CCTTSCSSSCCCCSSHHHHHHHHH-HTTSC
T ss_pred CCCeECCCcCCcccCHHHHHHHHH-HhCCC
Confidence 356666666666666666666653 45443
No 180
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=96.20 E-value=0.0018 Score=48.23 Aligned_cols=24 Identities=33% Similarity=0.700 Sum_probs=13.2
Q ss_pred CCCeecccCCCCCCChHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
..||.|++||+.|.+...|.+|.+
T Consensus 6 ~~~~~C~~C~~~f~~~~~l~~H~~ 29 (96)
T 2dmd_A 6 SGPHKCEVCGKCFSRKDKLKTHMR 29 (96)
T ss_dssp CCCCCBTTTTBCCCCHHHHHHHGG
T ss_pred CcCeECCCCCCccCCHHHHHHHHH
Confidence 345555555555555555555544
No 181
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.20 E-value=0.0018 Score=49.94 Aligned_cols=27 Identities=26% Similarity=0.470 Sum_probs=24.3
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
.||.|.+||+.|.+...|++|.+.-|.
T Consensus 53 ~~~~C~~C~k~F~~~~~L~~H~~~h~~ 79 (98)
T 2gqj_A 53 DALKCQHCRKQFKSKAGLNYHTMAEHS 79 (98)
T ss_dssp HHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred CCEECCCCCCccCCHHHHHHHHHHHcC
Confidence 589999999999999999999986553
No 182
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=96.14 E-value=0.0017 Score=42.92 Aligned_cols=31 Identities=23% Similarity=0.569 Sum_probs=26.4
Q ss_pred CCCCeecc--cCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICG--VCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~--VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|. .||+.|.+...|.+|.+ +|..|+
T Consensus 9 ~~k~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~k 41 (48)
T 2ent_A 9 GEKPFACTWPGCGWRFSRSDELSRHRR-SHSGVK 41 (48)
T ss_dssp CCCCEECCSSSCCCEESSHHHHHHHHT-TSCCCC
T ss_pred CCCCeECCCCCCCCccCCHHHHHHHHH-HhCCCC
Confidence 46799998 89999999999999975 576654
No 183
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.13 E-value=0.0026 Score=45.85 Aligned_cols=30 Identities=33% Similarity=0.716 Sum_probs=20.3
Q ss_pred CCCeeccc--CCCCCCChHHHHHHHHHhhhhhH
Q 014830 154 NDPYICGV--CGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 154 ~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER 184 (417)
..||.|.+ ||+.|.+...|.+|.+ +|..|+
T Consensus 36 ~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~ 67 (79)
T 2dlk_A 36 QKSFSCPEPACGKSFNFKKHLKEHMK-LHSDTR 67 (79)
T ss_dssp CCCEECSCTTTCCEESSHHHHHHHHH-HHHTSC
T ss_pred CCCeECCCCCCcCccCCHHHHHHHHH-HhCCCC
Confidence 35677777 7777777777777765 465443
No 184
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=96.12 E-value=0.0025 Score=45.59 Aligned_cols=39 Identities=23% Similarity=0.537 Sum_probs=30.0
Q ss_pred CCCCCeeccc--CCCCCCChHHHHHHHHHhhhhhHHHHHhhh
Q 014830 152 VPNDPYICGV--CGRKCKTNLDLKKHFKQLHERERQKKLNRM 191 (417)
Q Consensus 152 ~p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER~KRLnrL 191 (417)
...+||.|++ ||+.|.+...|.+|.+ .|..++.-++..+
T Consensus 15 ~~~~~~~C~~~~C~k~f~~~~~l~~H~~-~h~~~~~~~C~~C 55 (73)
T 1f2i_G 15 PKMRPYACPVESCDRRFSRSDELTRHIR-IHTGQKPFQCRIC 55 (73)
T ss_dssp CCCCCEECSSTTBCCEESSHHHHHHHHH-HHHCCCCEECTTT
T ss_pred CCCCccCCcCCCCCCccCCHHHHHHHHH-hhCCCCCeECCCC
Confidence 3567999985 9999999999999975 6876655444433
No 185
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.10 E-value=0.0022 Score=52.08 Aligned_cols=52 Identities=15% Similarity=0.117 Sum_probs=36.5
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhh---hhhHHHHHhhhhccccchhHHHHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLH---ERERQKKLNRMKSLKGKKRQKYKER 205 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLH---ERER~KRLnrL~S~KGkrR~rl~~~ 205 (417)
.++||.|..||+.|.+...|.+|.+.+| ..|+.-++..+... ...+..|...
T Consensus 15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~-F~~~~~L~~H 69 (102)
T 2ghf_A 15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFL-TKRYDALSEH 69 (102)
T ss_dssp CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEE-ESSTHHHHTH
T ss_pred CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcc-cCCHHHHHHH
Confidence 4579999999999999999999999999 44554444444322 3334444443
No 186
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=96.07 E-value=0.0033 Score=45.14 Aligned_cols=25 Identities=28% Similarity=0.650 Sum_probs=21.9
Q ss_pred CCCeecccCCCCCCChHHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
..||.|++||+.|.+...|.+|.+.
T Consensus 55 ~~~~~C~~C~~~f~~~~~l~~H~~~ 79 (82)
T 2kmk_A 55 EKPHKCQVCGKAFSQSSNLITHSRK 79 (82)
T ss_dssp CCCEECTTTSCEESSHHHHHHHHHH
T ss_pred CCCCcCCCcchhhCChHHHHHHHHh
Confidence 4789999999999999999999764
No 187
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=96.05 E-value=0.0033 Score=45.74 Aligned_cols=27 Identities=15% Similarity=0.525 Sum_probs=24.0
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLH 180 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLH 180 (417)
+.||.|.+||+.|.+...|.+|.+.-|
T Consensus 45 ~~~~~C~~C~~~f~~~~~L~~H~~~h~ 71 (86)
T 1x6h_A 45 PAAFVCSKCGKTFTRRNTMARHADNCA 71 (86)
T ss_dssp CCCEECSSSCCEESCHHHHHHHHHHCC
T ss_pred CcceECCCCCChhCCHHHHHHHHHHcc
Confidence 478999999999999999999987543
No 188
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=96.03 E-value=0.0025 Score=46.78 Aligned_cols=51 Identities=18% Similarity=0.321 Sum_probs=32.7
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
..||.|++||+.|.+...|..|.+ .|..++.-+...+... ..++..|...+
T Consensus 32 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~-f~~~~~l~~H~ 82 (90)
T 1a1h_A 32 QKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRK-FARSDERKRHT 82 (90)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCE-ESSHHHHHHHH
T ss_pred CCCccCCCCCcccCCHHHHHHHHH-HcCCCCCccCCCCCch-hCCHHHHHHHH
Confidence 478999999999999999999986 5665544333333222 33444444443
No 189
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=95.99 E-value=0.0041 Score=46.44 Aligned_cols=26 Identities=35% Similarity=0.741 Sum_probs=23.1
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
...||.|.+||+.|.+...|.+|.+.
T Consensus 72 ~~~~~~C~~C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 72 GAKPFQCGVCNRSFSRSDHLALHMKR 97 (100)
T ss_dssp SCCSCBCSSSCCBCSSHHHHHHHHHH
T ss_pred CCCCeECCCCcCccCCHHHHHHHHHH
Confidence 35789999999999999999999763
No 190
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=95.99 E-value=0.0014 Score=54.54 Aligned_cols=53 Identities=21% Similarity=0.279 Sum_probs=36.6
Q ss_pred CCCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
....||.|.+||+.|.+...|.+|.+ +|..|+.=....+... ...+..|...+
T Consensus 18 ~Gek~y~C~~C~k~F~~~~~L~~H~~-~H~~~k~~~C~~C~k~-F~~~~~L~~H~ 70 (133)
T 2lt7_A 18 DGRVYYICIVCKRSYVCLTSLRRHFN-IHSWEKKYPCRYCEKV-FPLAEYRTKHE 70 (133)
T ss_dssp TTEEEEEETTTCCEESCHHHHHHHHH-HHHCCSCEECSSSSCE-ESSHHHHHHHH
T ss_pred CCCcCeECCCCCCCcCCHHHHHHHHH-HcCCCCCeeCCccCee-cccccchhhhc
Confidence 34578999999999999999999986 6887766555544332 34444554443
No 191
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.98 E-value=0.0022 Score=50.39 Aligned_cols=50 Identities=18% Similarity=0.149 Sum_probs=35.5
Q ss_pred CCCCeecccCCCCC-CChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHH
Q 014830 153 PNDPYICGVCGRKC-KTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKER 205 (417)
Q Consensus 153 p~~PY~C~VCGRkf-~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~ 205 (417)
...||.|.+||+.| .+...|++|.+ +| .|+.-++..+... ..++..|...
T Consensus 31 ~~~~~~C~~C~k~F~~~~~~L~~H~~-~h-~~k~~~C~~Cgk~-F~~~~~L~~H 81 (96)
T 2ctd_A 31 DKGSVSCPTCQAVGRKTIEGLKKHME-NC-KQEMFTCHHCGKQ-LRSLAGMKYH 81 (96)
T ss_dssp HTSCEECTTTCSCEESSHHHHHHHHH-HH-CCCCCCCSSSCCC-CSSHHHHHHH
T ss_pred CCCCcCCCCCCCCcccCHHHHHHHHH-HH-CCCCeECCCCCCe-eCCHHHHHHH
Confidence 34789999999999 89999999986 47 6655445444332 4445555555
No 192
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=95.96 E-value=0.0049 Score=45.88 Aligned_cols=51 Identities=18% Similarity=0.303 Sum_probs=36.7
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
++||.|++||+.|.+...|.+|.+ +|..++.-+...+... ...+..|...+
T Consensus 1 ek~~~C~~C~k~f~~~~~L~~H~~-~H~~~~~~~C~~C~k~-f~~~~~L~~H~ 51 (88)
T 1llm_C 1 MKPFQCRICMRNFSRSDHLTTHIR-THTGEKPFACDICGRK-FARSDERKRHR 51 (88)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCE-ESSHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHH-HcCCCCCccCCCCCCc-cCCHHHHHHHH
Confidence 368999999999999999999987 4888765555444332 44445555544
No 193
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.96 E-value=0.0028 Score=50.08 Aligned_cols=48 Identities=17% Similarity=0.268 Sum_probs=32.1
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKER 205 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~ 205 (417)
..||.|.+||+.|.+...|.+|.+. | ++.-.+..+... ..++..|...
T Consensus 72 ~~~~~C~~C~k~f~~~~~l~~H~~~-H--~~~~~C~~C~k~-f~~~~~l~~H 119 (129)
T 2wbt_A 72 ISQFVCPLCLMPFSSSVSLKQHIRY-T--EHTKVCPVCKKE-FTSTDSALDH 119 (129)
T ss_dssp HCSEECTTTCCEESSHHHHHHHHHH-T--CCCCBCTTTCCB-CSSHHHHHHH
T ss_pred CCCeECCCCCcccCCHhHHHHHHHH-C--CCCCCCCCCCcc-cCCHHHHHHH
Confidence 4789999999999999999999864 7 544444433322 3444444443
No 194
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=95.94 E-value=0.0031 Score=45.29 Aligned_cols=30 Identities=37% Similarity=0.771 Sum_probs=20.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
...||.|++||+.|.+...|.+|.+ .|..+
T Consensus 26 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 55 (82)
T 2kmk_A 26 DTRPYPCQYCGKRFHQKSDMKKHTF-IHTGE 55 (82)
T ss_dssp TCCCEECSSSCCEESSHHHHHHHHH-HHHTC
T ss_pred CCCCeeCCcCChhhCCHHHHHHHHH-HhcCC
Confidence 3467777777777777777777765 44444
No 195
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=95.92 E-value=0.003 Score=52.55 Aligned_cols=30 Identities=23% Similarity=0.550 Sum_probs=20.6
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
+.||.|++||+.|.+...|.+|.+..|..+
T Consensus 76 ~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~ 105 (133)
T 2lt7_A 76 ERRYQCLACGKSFINYQFMSSHIKSVHSQD 105 (133)
T ss_dssp CCCEEESSSCCEESSHHHHHHHHHHHTCCC
T ss_pred CccccCCCCCCCcCCHHHHHHHhHHhcCCC
Confidence 356777777777777777777777766543
No 196
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=95.92 E-value=0.0041 Score=44.79 Aligned_cols=53 Identities=19% Similarity=0.236 Sum_probs=37.6
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHHHhhhhhHHHHHhh--hhccccchhHHHHHHh
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFKQLHERERQKKLNR--MKSLKGKKRQKYKERY 206 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER~KRLnr--L~S~KGkrR~rl~~~~ 206 (417)
...||.|.. ||+.|.+...|.+|.+..|..++.-.... ... ....+..|...+
T Consensus 4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k-~f~~~~~L~~H~ 60 (79)
T 2dlk_A 4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGK-SFNFKKHLKEHM 60 (79)
T ss_dssp CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCC-EESSHHHHHHHH
T ss_pred CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcC-ccCCHHHHHHHH
Confidence 357899998 99999999999999998998776544443 322 234444555443
No 197
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.84 E-value=0.0034 Score=46.61 Aligned_cols=29 Identities=24% Similarity=0.521 Sum_probs=18.2
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
+.||.|.+||+.|.+...|.+|.+ .|..+
T Consensus 5 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~ 33 (95)
T 2yt9_A 5 SSGVACEICGKIFRDVYHLNRHKL-SHSGE 33 (95)
T ss_dssp CSCEECSSSCCEESSSHHHHHHHH-HSCSS
T ss_pred CCCeECCCCCCccCChHHHHHHHH-hcCCC
Confidence 456666666666666666666665 35443
No 198
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.83 E-value=0.0053 Score=47.11 Aligned_cols=48 Identities=8% Similarity=-0.032 Sum_probs=29.2
Q ss_pred CeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 156 PYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 156 PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
||.|.+||+.|.+...|.+|.+ |..|+.-++..+... ...+..|...+
T Consensus 42 ~~~C~~C~~~f~~~~~l~~H~~--H~~~~~~~C~~C~~~-f~~~~~L~~H~ 89 (107)
T 1wjp_A 42 AAVCPYCSLRFFSPELKQEHES--KCEYKKLTCLECMRT-FKSSFSIWRHQ 89 (107)
T ss_dssp SBCCTTTCCCBSSHHHHHHHHH--HCSTGGGEEGGGTEE-CSSHHHHHHHH
T ss_pred CccCCCCCCccCCHHHHHHHHH--cCCCCCccCccccch-hCCHHHHHHHH
Confidence 6777777777777777777762 766665554444332 44455555544
No 199
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=95.77 E-value=0.0054 Score=48.43 Aligned_cols=28 Identities=18% Similarity=0.413 Sum_probs=25.1
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
..||.|.+||+.|.+...|.+|.+.-|.
T Consensus 98 ~~~~~C~~C~k~f~~~~~l~~H~~~h~~ 125 (129)
T 2wbt_A 98 EHTKVCPVCKKEFTSTDSALDHVCKKHN 125 (129)
T ss_dssp CCCCBCTTTCCBCSSHHHHHHHHHHTTC
T ss_pred CCCCCCCCCCcccCCHHHHHHHHHHHCC
Confidence 4689999999999999999999987663
No 200
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=95.73 E-value=0.0048 Score=47.28 Aligned_cols=30 Identities=33% Similarity=0.645 Sum_probs=19.0
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..||.|++||+.|.+...|.+|.+ +|..++
T Consensus 64 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~ 93 (119)
T 2jp9_A 64 VKPFQCKTCQRKFSRSDHLKTHTR-THTGEK 93 (119)
T ss_dssp CCCEECTTTCCEESCHHHHHHHHH-HHHTCC
T ss_pred CCCccCCccCchhCCHHHHHHHHH-HhcCCC
Confidence 356777777777777777777765 354443
No 201
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.65 E-value=0.0052 Score=45.78 Aligned_cols=27 Identities=26% Similarity=0.482 Sum_probs=19.8
Q ss_pred eecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 157 YICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 157 Y~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
|.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 63 ~~C~~C~k~f~~~~~L~~H~~-~H~~~k 89 (95)
T 2ej4_A 63 EECPREGKSFKAKYKLVNHIR-VHTGEK 89 (95)
T ss_dssp TTCSSTTCCCSSHHHHHHHHH-HHHTCC
T ss_pred cCCCCCCcccCCHHHHHHHHH-hcCCCC
Confidence 778888888888888888865 466553
No 202
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.62 E-value=0.0047 Score=45.93 Aligned_cols=25 Identities=20% Similarity=0.651 Sum_probs=19.4
Q ss_pred CCCeecccCCCCCCChHHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
..||.|++||+.|.+...|.+|.+.
T Consensus 62 ~~~~~C~~C~~~f~~~~~l~~H~~~ 86 (96)
T 2dmd_A 62 ERPFKCQICPYASRNSSQLTVHLRS 86 (96)
T ss_dssp CCCEECSSSSCEESSHHHHHHHHTT
T ss_pred CCCccCCCCCCccCCHHHHHHHHHH
Confidence 4678888888888888888888764
No 203
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=95.57 E-value=0.0043 Score=43.39 Aligned_cols=30 Identities=23% Similarity=0.586 Sum_probs=27.2
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.+.++||.|-+.|.+...|..||...|..+
T Consensus 3 ~EGFiCP~C~~~l~s~~~L~~Hye~~H~~~ 32 (34)
T 3mjh_B 3 SEGFICPQCMKSLGSADELFKHYEAVHDAG 32 (34)
T ss_dssp SEEEECTTTCCEESSHHHHHHHHHHHTSSS
T ss_pred CcccCCcHHHHHcCCHHHHHHHHHhccccC
Confidence 357999999999999999999999999764
No 204
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=95.55 E-value=0.0056 Score=44.74 Aligned_cols=24 Identities=29% Similarity=0.627 Sum_probs=21.4
Q ss_pred CCCeecccCCCCCCChHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
..||.|++||+.|.+...|.+|.+
T Consensus 63 ~~~~~C~~C~~~f~~~~~l~~H~~ 86 (89)
T 2wbs_A 63 HRPFQCQKCDRAFSRSDHLALHMK 86 (89)
T ss_dssp CCCEECSSSSCEESSHHHHHHHGG
T ss_pred CCCccCCCCCcccCCHHHHHHHHH
Confidence 468999999999999999999975
No 205
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.54 E-value=0.0056 Score=43.65 Aligned_cols=25 Identities=16% Similarity=0.230 Sum_probs=22.4
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
+..||.|..||+.|. ...|.+|.+.
T Consensus 7 ~~~~~~C~~C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 7 GKRTQPCTYCTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp CCCEEECSSSCCEEE-HHHHHHHHHH
T ss_pred CCCCeeccccCCccC-HHHHHHHHHH
Confidence 668999999999999 9999999876
No 206
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=95.50 E-value=0.0054 Score=51.35 Aligned_cols=53 Identities=21% Similarity=0.341 Sum_probs=33.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERYI 207 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~a 207 (417)
...||.|++||+.|.+...|.+|.+ +|..++.-+....... ...+..|...+.
T Consensus 130 ~~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~~~~C~~C~~~-f~~~~~L~~H~~ 182 (190)
T 2i13_A 130 GEKPYKCPECGKSFSREDNLHTHQR-THTGEKPYKCPECGKS-FSRRDALNVHQR 182 (190)
T ss_dssp CCCCEECTTTCCEESCHHHHHHHHH-HHHCCCCEECTTTCCE-ESSHHHHHHHHT
T ss_pred CCCCeECCCCCcccCCHHHHHHHHH-hcCCCCCeECCCCCCc-cCCHHHHHHHHH
Confidence 3467888888888888888888876 4665554444433322 444455555443
No 207
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.42 E-value=0.0085 Score=46.23 Aligned_cols=27 Identities=19% Similarity=0.441 Sum_probs=24.5
Q ss_pred CCCCCeecccCCCCCCChHHHHHHHHH
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
....||.|.+||+.|.+...|.+|.+.
T Consensus 15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 15 TGASKFRCKDCSAAYDTLVELTVHMNE 41 (115)
T ss_dssp CCCCSEEBSSSSCEESSHHHHHHHHHH
T ss_pred CCCCCEECCccCchhcCHHHHHHHHHH
Confidence 356899999999999999999999985
No 208
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=95.41 E-value=0.0063 Score=46.79 Aligned_cols=31 Identities=23% Similarity=0.580 Sum_probs=20.6
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
...||.|++||+.|.+...|.+|.+ +|..++
T Consensus 63 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~ 93 (124)
T 2dlq_A 63 SEQVFTCSVCQETFRRRMELRLHMV-SHTGEM 93 (124)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHH-HHSSSC
T ss_pred CCCCeECCCCCCccCCHHHHHHHHH-HcCCCC
Confidence 3467777777777777777777764 454443
No 209
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.05 E-value=0.013 Score=43.57 Aligned_cols=31 Identities=19% Similarity=0.129 Sum_probs=27.5
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
..|.|..||+.|.+...|.+|.+..|..++.
T Consensus 24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~ 54 (95)
T 2ej4_A 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPE 54 (95)
T ss_dssp SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTT
T ss_pred CCCcccccccccCCHHHHHHHHHHhccCCCC
Confidence 3578999999999999999999988988765
No 210
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.04 E-value=0.0063 Score=43.39 Aligned_cols=30 Identities=30% Similarity=0.448 Sum_probs=25.5
Q ss_pred CCCCCeecc-cCCCCCCChHHHHHHHHHhhhh
Q 014830 152 VPNDPYICG-VCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 152 ~p~~PY~C~-VCGRkf~T~~kL~kHFKQLHER 182 (417)
....||.|+ .||+.|.....|.+|.+ +|..
T Consensus 32 ~~~~p~~C~~~C~k~f~~~~~L~~H~~-~hc~ 62 (66)
T 2eod_A 32 CPRLPVACPNQCGVGTVAREDLPGHLK-DSCN 62 (66)
T ss_dssp CSSSEEECTTCCSCCEEETTTHHHHHH-TTSS
T ss_pred cCCcCccCCcccCcccccHHHHHHHHH-hhcc
Confidence 456899999 99999999999999975 4643
No 211
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=95.01 E-value=0.01 Score=42.47 Aligned_cols=34 Identities=26% Similarity=0.435 Sum_probs=26.6
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHHHhhhhhHHHH
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFKQLHERERQKK 187 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER~KR 187 (417)
...+|.|.+ ||+.|.+...|.+|.+ +|..|+.-+
T Consensus 14 ~~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~~~~~ 49 (72)
T 2epa_A 14 RIRSHICSHPGCGKTYFKSSHLKAHTR-THTGEKPFS 49 (72)
T ss_dssp CCCCEECSSTTTCCEESSHHHHHHHHH-HHSSSCSEE
T ss_pred ccCceeCCCCCCccccCCHHHHHHHHH-hcCCCCCcc
Confidence 446899988 9999999999999985 576665433
No 212
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.99 E-value=0.0057 Score=49.14 Aligned_cols=33 Identities=27% Similarity=0.610 Sum_probs=26.8
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|++ ||+.|.+...|.+|.+.+|..++.
T Consensus 94 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~ 128 (155)
T 2gli_A 94 GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKP 128 (155)
T ss_dssp TCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCC
T ss_pred CCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence 346888988 998888888888888888877654
No 213
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=94.88 E-value=0.01 Score=46.03 Aligned_cols=30 Identities=30% Similarity=0.804 Sum_probs=18.4
Q ss_pred CCCeeccc--CCCCCCChHHHHHHHHHhhhhhH
Q 014830 154 NDPYICGV--CGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 154 ~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER 184 (417)
..||.|++ ||+.|.+...|.+|.++ |..|+
T Consensus 90 ~~~~~C~~~~C~~~f~~~~~L~~H~~~-H~~~k 121 (124)
T 1ubd_C 90 DRPYVCPFDGCNKKFAQSTNLKSHILT-HAKAK 121 (124)
T ss_dssp CCCCCCCSTTCCCCCSSTTTTHHHHHH-HC---
T ss_pred CCceECCCCCCCCccCCHHHHHHHHHH-Hcccc
Confidence 35677754 77777777777777654 55443
No 214
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=94.83 E-value=0.013 Score=42.19 Aligned_cols=25 Identities=32% Similarity=0.570 Sum_probs=16.6
Q ss_pred CCCeeccc--CCCCCCChHHHHHHHHH
Q 014830 154 NDPYICGV--CGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 154 ~~PY~C~V--CGRkf~T~~kL~kHFKQ 178 (417)
.+||.|++ ||+.|.+...|.+|.+.
T Consensus 29 ~~~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 29 QLPYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp TCCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CCCeeCCCCCCcCccCCHHHHHHHHHH
Confidence 46777766 77777777777777643
No 215
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=94.81 E-value=0.011 Score=42.32 Aligned_cols=25 Identities=24% Similarity=0.648 Sum_probs=22.1
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHH
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFK 177 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFK 177 (417)
...||.|.+ ||+.|.+...|.+|.+
T Consensus 44 ~~~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 44 GEKPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp SSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred CCCCccCCCCCCCcccCCHHHHHhHhh
Confidence 357899976 9999999999999975
No 216
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=94.79 E-value=0.02 Score=43.38 Aligned_cols=32 Identities=31% Similarity=0.661 Sum_probs=24.2
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|.+||+.|.+...|.+|.+ .|..++.
T Consensus 14 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~ 45 (106)
T 2ee8_A 14 TKKEFICKFCGRHFTKSYNLLIHER-THTDERP 45 (106)
T ss_dssp CCCCCBCSSSCCBCSSHHHHHHHHH-HHCCSCC
T ss_pred CCcCeECCCCCCccCCHHHHHHHHH-HcCCCCC
Confidence 4568889889888888888888876 4555443
No 217
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=94.70 E-value=0.012 Score=49.23 Aligned_cols=51 Identities=20% Similarity=0.395 Sum_probs=28.8
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhhhccccchhHHHHHHh
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRMKSLKGKKRQKYKERY 206 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL~S~KGkrR~rl~~~~ 206 (417)
..||.|++||+.|.+...|.+|.+. |..++.-+...... ....+..|...+
T Consensus 103 ~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~-~f~~~~~L~~H~ 153 (190)
T 2i13_A 103 EKPYACPECGKSFSQLAHLRAHQRT-HTGEKPYKCPECGK-SFSREDNLHTHQ 153 (190)
T ss_dssp CCCEECTTTCCEESSHHHHHHHHHH-HHCCCCEECTTTCC-EESCHHHHHHHH
T ss_pred CCCCcCCCCCCccCCHHHHHHHHHH-hCCCCCeECCCCCc-ccCCHHHHHHHH
Confidence 4677888888888888888887753 54444333333322 233444444443
No 218
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=94.59 E-value=0.022 Score=43.56 Aligned_cols=29 Identities=24% Similarity=0.597 Sum_probs=17.6
Q ss_pred CCCeeccc--CCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGV--CGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~V--CGRkf~T~~kL~kHFKQLHERE 183 (417)
..||.|.+ ||+.|.+...|.+|.+ .|..+
T Consensus 4 ~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~ 34 (119)
T 2jp9_A 4 KRPFMCAYPGCNKRYFKLSHLQMHSR-KHTGE 34 (119)
T ss_dssp SCCBCCCSTTSCCCBSCHHHHHHHHH-HHHTT
T ss_pred CeeeeCCCCCCcchhCCHHHHHHHHH-hhCCC
Confidence 35666665 6666666666666655 34443
No 219
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=94.51 E-value=0.015 Score=46.96 Aligned_cols=33 Identities=18% Similarity=0.131 Sum_probs=28.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...+|.|..||+.|.+...|.+|.+..|..++.
T Consensus 22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~ 54 (155)
T 2rpc_A 22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPE 54 (155)
T ss_dssp TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTT
T ss_pred hhcccccccCCcccCCHHHHHHHHHhhcCCCcc
Confidence 456899999999999999999999998987654
No 220
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=94.41 E-value=0.021 Score=45.86 Aligned_cols=28 Identities=32% Similarity=0.846 Sum_probs=25.4
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHHHhh
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFKQLH 180 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFKQLH 180 (417)
...||.|++ ||+.|.+...|.+|.+..|
T Consensus 125 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~hh 154 (155)
T 2gli_A 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154 (155)
T ss_dssp SCCCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred CCCCeeCCCCCCccccCCHHHHHHHHHhhc
Confidence 357899999 9999999999999999876
No 221
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=94.40 E-value=0.0081 Score=42.97 Aligned_cols=33 Identities=9% Similarity=0.155 Sum_probs=25.5
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLN 189 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLn 189 (417)
.+.||.|++||+.|.+...|. .+|..|+.-++.
T Consensus 11 ~~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~ 43 (62)
T 1vd4_A 11 NRASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCT 43 (62)
T ss_dssp SSSEEECSSSCCEEEHHHHHH----HEETTTTEEBCS
T ss_pred CCCCccCCCCCchhccHHHhH----hhcCCCCCEECC
Confidence 467999999999999887775 788877654333
No 222
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=94.31 E-value=0.016 Score=50.16 Aligned_cols=35 Identities=29% Similarity=0.495 Sum_probs=29.7
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKL 188 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRL 188 (417)
..||.|..||+.|.+...|..|++.-.-+.|.|+|
T Consensus 48 ekpfyC~~C~K~F~~~~~L~~H~rsK~HKrrvk~l 82 (124)
T 1zr9_A 48 GGLHRCLACARYFIDSTNLKTHFRSKDHKKRLKQL 82 (124)
T ss_dssp GGCSEETTTTEECSSHHHHHHHTTCHHHHHHHHHH
T ss_pred CcceEcccCcchhCCHHHHHHHHhhhhhhHHHHHh
Confidence 46999999999999999999999887666665555
No 223
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=94.30 E-value=0.0094 Score=48.18 Aligned_cols=29 Identities=31% Similarity=0.772 Sum_probs=18.5
Q ss_pred CCCeeccc--CCCCCCChHHHHHHHHHhhhhh
Q 014830 154 NDPYICGV--CGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 154 ~~PY~C~V--CGRkf~T~~kL~kHFKQLHERE 183 (417)
..||.|.+ ||+.|.+...|.+|.+ +|..|
T Consensus 118 ~~~~~C~~~~C~k~f~~~~~L~~H~~-~H~~~ 148 (155)
T 2rpc_A 118 EKPFKCEFEGCDRRFANSSDRKKHMH-VHTSD 148 (155)
T ss_dssp SCSBCCSSTTCCCCBSSHHHHHHSST-TTTSC
T ss_pred CCCccCCCCCCCCccCCHHHHHHHHH-HhcCC
Confidence 35677776 7777777777777764 45544
No 224
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=94.14 E-value=0.032 Score=40.04 Aligned_cols=27 Identities=30% Similarity=0.566 Sum_probs=21.4
Q ss_pred Ceec--ccCCCCCCChHHHHHHHHHhhhh
Q 014830 156 PYIC--GVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 156 PY~C--~VCGRkf~T~~kL~kHFKQLHER 182 (417)
||.| +.||+.|.+...|.+|.+.-+..
T Consensus 1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 29 (85)
T 2j7j_A 1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQ 29 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHHHHTT
T ss_pred CccCCCCCCCcccCCHHHHHHHHHHhCCC
Confidence 6888 77888888888888888776664
No 225
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=93.74 E-value=0.034 Score=41.34 Aligned_cols=31 Identities=23% Similarity=0.468 Sum_probs=22.1
Q ss_pred CCCCeeccc--CCCCCCChHHHHHHHHHhhhhhH
Q 014830 153 PNDPYICGV--CGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 153 p~~PY~C~V--CGRkf~T~~kL~kHFKQLHERER 184 (417)
...+|.|.+ ||+.|.+...|.+|.+. |..++
T Consensus 12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~ 44 (100)
T 2ebt_A 12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT-HTGEK 44 (100)
T ss_dssp SCCCEECCSSSCCCEESCHHHHHHHHHH-HSCCC
T ss_pred cCcceEcCCCCCCCcccCHHHHHHHHHH-hCCCC
Confidence 445788886 88888888888888763 55443
No 226
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=93.71 E-value=0.03 Score=40.81 Aligned_cols=32 Identities=31% Similarity=0.703 Sum_probs=25.1
Q ss_pred CCCCeecc--cCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 153 PNDPYICG--VCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 153 p~~PY~C~--VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...||.|+ +||+.|.+...|.+|.+ .|..++.
T Consensus 32 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~ 65 (89)
T 2wbs_A 32 GEKPYHCDWDGCGWKFARSDELTRHYR-KHTGHRP 65 (89)
T ss_dssp SSCCEECCSTTTCCEESSHHHHHHHHH-HHHCCCC
T ss_pred CCCCcCCCCCCCCCccCCHHHHHHHHH-HcCCCCC
Confidence 45789997 69999999999999974 6766544
No 227
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=93.32 E-value=0.001 Score=46.86 Aligned_cols=30 Identities=13% Similarity=0.264 Sum_probs=23.5
Q ss_pred CCCeecccCCCCCCChHHHHHHHHHhhhhhH
Q 014830 154 NDPYICGVCGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL~kHFKQLHERER 184 (417)
..||.|.+||+.|.+...|.+|.+ +|..|+
T Consensus 37 ~~~~~C~~C~~~f~~~~~l~~H~~-~H~~~~ 66 (73)
T 2ctu_A 37 RKTPMCEKCRKDSCQEAALNKDEG-NESGKK 66 (73)
T ss_dssp SSSCCCHHHHHTCSCCCSSCCCSS-CCCCCC
T ss_pred CCCCCCCCCChhhcCHHHHHHHHH-hhcCCC
Confidence 478999999999999999998865 465543
No 228
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=92.65 E-value=0.056 Score=41.86 Aligned_cols=23 Identities=22% Similarity=0.540 Sum_probs=11.9
Q ss_pred CCeecc--cCCCCCCChHHHHHHHH
Q 014830 155 DPYICG--VCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 155 ~PY~C~--VCGRkf~T~~kL~kHFK 177 (417)
.||.|+ .||+.|.+...|.+|.+
T Consensus 4 ~~~~C~~~~C~~~f~~~~~l~~H~~ 28 (124)
T 1ubd_C 4 RTIACPHKGCTKMFRDNSAMRKHLH 28 (124)
T ss_dssp -CEECCSTTCCCEESSHHHHHHHHG
T ss_pred CcccCCCCCCcCccCCHHHHHHHHH
Confidence 455555 45555555555555543
No 229
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=91.68 E-value=0.083 Score=44.12 Aligned_cols=33 Identities=33% Similarity=0.617 Sum_probs=19.0
Q ss_pred CCCCCeec--ccCCCCCCChHHHHHHHHHhhhhhHH
Q 014830 152 VPNDPYIC--GVCGRKCKTNLDLKKHFKQLHERERQ 185 (417)
Q Consensus 152 ~p~~PY~C--~VCGRkf~T~~kL~kHFKQLHERER~ 185 (417)
...+||.| +.||+.|.+...|..|.+ .|..++.
T Consensus 8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~-~h~~~~~ 42 (190)
T 1tf6_A 8 VVYKRYICSFADCGAAYNKNWKLQAHLC-KHTGEKP 42 (190)
T ss_dssp --CCCCBCSSTTTCCBCSSHHHHHHHHH-HHHCCCS
T ss_pred CCCcceeCCCCCCcchhCCHHHHHHHHH-hcCCCCC
Confidence 34456666 467777777777777764 3544443
No 230
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=91.59 E-value=0.36 Score=40.61 Aligned_cols=77 Identities=21% Similarity=0.157 Sum_probs=53.7
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQ 304 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R 304 (417)
++..|.+.|..|..+.+.+... . +....+..+ +++|++|-+ .+...+++.|+++|+++|.|.+. .+.|.+
T Consensus 57 ~~~~l~~~g~~~~~~~~~~~~~----~-~~~~~~~~~-d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~ 130 (187)
T 3sho_A 57 LGHGLNSLGIRTTVLTEGGSTL----T-ITLANLRPT-DLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDSSVSPPAR 130 (187)
T ss_dssp HHHHHHHTTCCEEEECCCTHHH----H-HHHHTCCTT-EEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESCTTSHHHH
T ss_pred HHHHHHhcCCCEEEecCCchhH----H-HHHhcCCCC-CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCCcchh
Confidence 4667889999999987322211 1 111123333 677777765 35667788999999999999996 468999
Q ss_pred ccccccc
Q 014830 305 HADLWVP 311 (417)
Q Consensus 305 ~ADl~fS 311 (417)
.||..+.
T Consensus 131 ~ad~~l~ 137 (187)
T 3sho_A 131 IADHVLV 137 (187)
T ss_dssp HCSEEEE
T ss_pred hCcEEEE
Confidence 9998775
No 231
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=90.88 E-value=0.12 Score=43.19 Aligned_cols=29 Identities=28% Similarity=0.699 Sum_probs=24.7
Q ss_pred CCCCeecc--cCCCCCCChHHHHHHHHHhhh
Q 014830 153 PNDPYICG--VCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 153 p~~PY~C~--VCGRkf~T~~kL~kHFKQLHE 181 (417)
...||.|. .||+.|.+...|.+|.+..|.
T Consensus 69 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 69 GEKNFTCDSDGCDLRFTTKANMKKHFNRFHN 99 (190)
T ss_dssp TCCCEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred CCCceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 34789999 899999999999999988883
No 232
>3h75_A Periplasmic sugar-binding domain protein; protein structure initiative II (PSI II), sugar binding PROT alpha/beta fold; 1.60A {Pseudomonas fluorescens pf-5}
Probab=90.40 E-value=0.6 Score=42.27 Aligned_cols=70 Identities=13% Similarity=0.219 Sum_probs=54.6
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhh--CCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMS--SGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~--rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
|+..+++..|+.+.......+++ .-..+++.++. .+++.||++.+......+++.++++|+..|+++...
T Consensus 25 g~~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~~i~~~~~vDgiIi~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (350)
T 3h75_A 25 FMQAAARDLGLDLRILYAERDPQ--NTLQQARELFQGRDKPDYLMLVNEQYVAPQILRLSQGSGIKLFIVNSPL 96 (350)
T ss_dssp HHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHSSSCCSEEEEECCSSHHHHHHHHHTTSCCEEEEEESCC
T ss_pred HHHHHHHHcCCeEEEEECCCCHH--HHHHHHHHHHhcCCCCCEEEEeCchhhHHHHHHHHHhCCCcEEEEcCCC
Confidence 67778888899998775444333 22456677777 599999999877778899999999999999998753
No 233
>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=90.29 E-value=0.16 Score=38.38 Aligned_cols=23 Identities=22% Similarity=0.458 Sum_probs=22.2
Q ss_pred CCeecccCCCCCCChHHHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
.+|.|+-||+.|+-.+.|++|.|
T Consensus 11 ~~~~CPrCn~~f~~~~sLr~Hmk 33 (49)
T 2e72_A 11 GRKICPRCNAQFRVTEALRGHMC 33 (49)
T ss_dssp SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred CceeCCcccccccchHHHHhhhh
Confidence 68999999999999999999998
No 234
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=89.88 E-value=1.4 Score=38.16 Aligned_cols=71 Identities=11% Similarity=0.115 Sum_probs=53.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeC-CcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSD-DNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSD-DsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..++++.|+.+.......+.. .....+..++.++++.||+..- ......+++.+++.++..|+++...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~ 99 (293)
T 3l6u_A 28 NAFKAEAKANKYEALVATSQNSRI--SEREQILEFVHLKVDAIFITTLDDVYIGSAIEEAKKAGIPVFAIDRMI 99 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECSSCHH--HHHHHHHHHHHTTCSEEEEECSCTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHHcCCEEEEECCCCCHH--HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHcCCCEEEecCCC
Confidence 467788889999998775544333 2345566678899999998764 4556689999999999999998743
No 235
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=89.84 E-value=0.12 Score=35.41 Aligned_cols=17 Identities=18% Similarity=0.227 Sum_probs=14.5
Q ss_pred CCCCeecccCCCCCCCh
Q 014830 153 PNDPYICGVCGRKCKTN 169 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~ 169 (417)
...||.|.+||+.|.++
T Consensus 38 ~~k~~~C~~C~k~F~~~ 54 (54)
T 2eps_A 38 SERPHKCQVWVSGPSSG 54 (54)
T ss_dssp CCCCCCSSSSCCSSCCC
T ss_pred CCCCccCCCCCCCCCCC
Confidence 35799999999999864
No 236
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=89.81 E-value=0.96 Score=39.27 Aligned_cols=68 Identities=19% Similarity=0.177 Sum_probs=53.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+... ....+..+.+++++.||+.+-+. ...++.+++.|+..|+++..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiIi~~~~~--~~~~~~l~~~~iPvV~i~~~ 94 (276)
T 3jy6_A 27 KGISSILESRGYIGVLFDANADIER--EKTLLRAIGSRGFDGLILQSFSN--PQTVQEILHQQMPVVSVDRE 94 (276)
T ss_dssp HHHHHHHHTTTCEEEEEECTTCHHH--HHHHHHHHHTTTCSEEEEESSCC--HHHHHHHHTTSSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHHH--HHHHHHHHHhCCCCEEEEecCCc--HHHHHHHHHCCCCEEEEecc
Confidence 3677888999999988765544332 23455667789999999998877 88999999999999999874
No 237
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=88.71 E-value=1 Score=38.42 Aligned_cols=70 Identities=19% Similarity=0.226 Sum_probs=52.4
Q ss_pred CchHHHHhcceEEEEeCC--CchhHHHHHHHHHHHhhhCC-cceEEEEeCC-cchHHHHHHHHHcCCcEEEEcCCC
Q 014830 228 GLGSELRRAGVFVKTVRD--KPQAADWALKRQMQHSMSSG-VDWMFLVSDD-NDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~d--KPqAAD~ALkrhm~~~m~rg-v~cLvLVSDD-sdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
|+..++++.|+.+..... ..+.+ .....+..++.++ ++.||+.+-+ ......++.+++.++..|+++...
T Consensus 21 gi~~~~~~~g~~~~~~~~~~~~~~~--~~~~~i~~l~~~~~vdgii~~~~~~~~~~~~~~~~~~~~ipvV~~~~~~ 94 (276)
T 3ksm_A 21 GAQKAADEAGVTLLHRSTKDDGDIA--GQIQILSYHLSQAPPDALILAPNSAEDLTPSVAQYRARNIPVLVVDSDL 94 (276)
T ss_dssp HHHHHHHHHTCEEEECCCSSTTCHH--HHHHHHHHHHHHSCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCC
T ss_pred HHHHHHHHcCCEEEEECCCCCCCHH--HHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHHHHHCCCcEEEEecCC
Confidence 677788889999987742 12222 2345566678888 9999998854 467889999999999999998743
No 238
>3o74_A Fructose transport system repressor FRUR; dual transcriptional regulator, DNA, transcription; 2.00A {Pseudomonas putida} PDB: 3o75_A*
Probab=88.69 E-value=0.72 Score=39.44 Aligned_cols=70 Identities=16% Similarity=0.126 Sum_probs=52.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....+..+.+.+++.||+.+-+..-.+.++.+++.|+..|+++..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (272)
T 3o74_A 22 KQLEQGARARGYQLLIASSDDQPD--SERQLQQLFRARRCDALFVASCLPPEDDSYRELQDKGLPVIAIDRR 91 (272)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCCCCSSCCHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHHcCCCEEEEecCccccHHHHHHHHHcCCCEEEEccC
Confidence 366778889999998775544333 1244556677899999999887644467888999999999999874
No 239
>3etn_A Putative phosphosugar isomerase involved in capsu formation; YP_209877.1; HET: MSE CMK; 1.70A {Bacteroides fragilis nctc 9343}
Probab=88.12 E-value=1.1 Score=39.66 Aligned_cols=95 Identities=16% Similarity=0.328 Sum_probs=64.2
Q ss_pred chHHHHHHHhhcC-----CC-C---CCC--------chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEE
Q 014830 210 NDKYNEAARSLLK-----PK-V---GYG--------LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLV 272 (417)
Q Consensus 210 ~~KY~~AArevL~-----PK-v---GYG--------LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLV 272 (417)
....++++..+.. .+ + |.| ++..|.+.|..|..+.+.-... .....+..+ +++|++
T Consensus 41 ~~~i~~~~~~i~~~a~~~a~~I~i~G~G~S~~~A~~~~~~l~~lg~~~~~~~~~~~~~------~~~~~~~~~-DlvI~i 113 (220)
T 3etn_A 41 TDAYEKAVELIVEQIHRKKGKLVTSGMGKAGQIAMNIATTFCSTGIPSVFLHPSEAQH------GDLGILQEN-DLLLLI 113 (220)
T ss_dssp CTHHHHHHHHHHHHTTTTCCCEEEECSHHHHHHHHHHHHHHHHTTCCEEECCTTGGGB------TGGGGCCTT-CEEEEE
T ss_pred HHHHHHHHHHHHhHhhccCCEEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCCHHHHH------hhhccCCCC-CEEEEE
Confidence 4567777776665 32 2 544 5667889999999886442111 000122333 677888
Q ss_pred eCC---cchHHHHHHHHH--cCCcEEEEcCC-CCccccccccccc
Q 014830 273 SDD---NDFKEMLRKARD--ANLGTVVVGDS-NRGLGQHADLWVP 311 (417)
Q Consensus 273 SDD---sdF~~~Lr~AR~--~~v~TVVVGd~-~~~L~R~ADl~fS 311 (417)
|-+ .+...+++.|++ +|+++|.|.+. .+.|.+.||..+.
T Consensus 114 S~SG~t~~~i~~~~~ak~~~~Ga~vI~IT~~~~s~La~~aD~~l~ 158 (220)
T 3etn_A 114 SNSGKTREIVELTQLAHNLNPGLKFIVITGNPDSPLASESDVCLS 158 (220)
T ss_dssp CSSSCCHHHHHHHHHHHHHCTTCEEEEEESCTTSHHHHHSSEEEE
T ss_pred cCCCCCHHHHHHHHHHHhcCCCCeEEEEECCCCChhHHhCCEEEE
Confidence 764 456677889999 99999999986 4789999998775
No 240
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=87.70 E-value=1.7 Score=37.51 Aligned_cols=97 Identities=12% Similarity=0.141 Sum_probs=63.7
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc----chHHHHHHHHHcCCcEEEEcCCCCcc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN----DFKEMLRKARDANLGTVVVGDSNRGL 302 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs----dF~~~Lr~AR~~~v~TVVVGd~~~~L 302 (417)
.|+..++++.|+.+.......... .....++.++.++++-||+.+-++ .-.++++.+++.++..|+++......
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~ 112 (298)
T 3tb6_A 35 RGIESYLSEQGYSMLLTSTNNNPD--NERRGLENLLSQHIDGLIVEPTKSALQTPNIGYYLNLEKNGIPFAMINASYAEL 112 (298)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTCCSEEEECCSSTTSCCTTHHHHHHHHHTTCCEEEESSCCTTC
T ss_pred HHHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHHCCCCEEEEecccccccCCcHHHHHHHHhcCCCEEEEecCcCCC
Confidence 377889999999998875443333 224456667789999999987654 34578899999999999998743221
Q ss_pred ccccccccchhhhhcCcccccccccC
Q 014830 303 GQHADLWVPWIEVENGELTERDLVPR 328 (417)
Q Consensus 303 ~R~ADl~fSW~eV~~Gk~~~~~~~~~ 328 (417)
. --++..+....|+.--+-|..+
T Consensus 113 -~--~~~V~~d~~~~~~~a~~~L~~~ 135 (298)
T 3tb6_A 113 -A--APSFTLDDVKGGMMAAEHLLSL 135 (298)
T ss_dssp -S--SCEEEECHHHHHHHHHHHHHHT
T ss_pred -C--CCEEEeCcHHHHHHHHHHHHHC
Confidence 1 1234444455554444444443
No 241
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=87.69 E-value=1.5 Score=38.00 Aligned_cols=95 Identities=15% Similarity=0.070 Sum_probs=63.8
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC-cchHHHHHHHHHcCCcEEEEcCCCCccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD-NDFKEMLRKARDANLGTVVVGDSNRGLGQH 305 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD-sdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ 305 (417)
.|+..++++.|+.+.......+... -...++.++.++++-||+..-+ ......++.++++|+..|+++.... .
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~---~- 98 (291)
T 3l49_A 25 QAQIAEIERLGGTAIALDAGRNDQT--QVSQIQTLIAQKPDAIIEQLGNLDVLNPWLQKINDAGIPLFTVDTATP---H- 98 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHHH--HHHHHHHHHHHCCSEEEEESSCHHHHHHHHHHHHHTTCCEEEESCCCT---T-
T ss_pred HHHHHHHHHcCCEEEEEcCCCCHHH--HHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCcEEEecCCCC---C-
Confidence 3677888999999988754433331 2344566778999999988766 4577899999999999999986431 1
Q ss_pred cccccchhhhhcCccccccccc
Q 014830 306 ADLWVPWIEVENGELTERDLVP 327 (417)
Q Consensus 306 ADl~fSW~eV~~Gk~~~~~~~~ 327 (417)
..-++..+....|+.--+-|..
T Consensus 99 ~~~~V~~D~~~~g~~~~~~l~~ 120 (291)
T 3l49_A 99 AINNTTSNNYSIGAELALQMVA 120 (291)
T ss_dssp CSEEEEECHHHHHHHHHHHHHH
T ss_pred cCceEecChHHHHHHHHHHHHH
Confidence 1224445555555544444444
No 242
>1tjy_A Sugar transport protein; protein-ligand complex, signaling protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP: c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Probab=87.36 E-value=1.6 Score=39.25 Aligned_cols=97 Identities=10% Similarity=0.116 Sum_probs=60.7
Q ss_pred CCchHHHHhcceEEEEeC-CCchhHHHHHHHHHHHhhhCCcceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcCCCCcccc
Q 014830 227 YGLGSELRRAGVFVKTVR-DKPQAADWALKRQMQHSMSSGVDWMFLVSDDND-FKEMLRKARDANLGTVVVGDSNRGLGQ 304 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~-dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd~~~~L~R 304 (417)
-|+..+++..|+.+.... ....++ .-..+++.++.+|++.||+++-+++ ...+++.|+++|+..|+++.....-.
T Consensus 23 ~g~~~~~~~~g~~~~~~~~~~~d~~--~q~~~i~~li~~~vdgiii~~~~~~~~~~~~~~a~~~gipvV~~d~~~~~~~- 99 (316)
T 1tjy_A 23 NGAQEAGKALGIDVTYDGPTEPSVS--GQVQLVNNFVNQGYDAIIVSAVSPDGLCPALKRAMQRGVKILTWDSDTKPEC- 99 (316)
T ss_dssp HHHHHHHHHHTCEEEECCCSSCCHH--HHHHHHHHHHHTTCSEEEECCSSSSTTHHHHHHHHHTTCEEEEESSCCCGGG-
T ss_pred HHHHHHHHHhCCEEEEECCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCcCEEEEecCCCCCCC-
Confidence 356677888898887652 222222 1245667778899999999876554 57899999999999888865321111
Q ss_pred cccccc-chhhhhcCccccccccc
Q 014830 305 HADLWV-PWIEVENGELTERDLVP 327 (417)
Q Consensus 305 ~ADl~f-SW~eV~~Gk~~~~~~~~ 327 (417)
.+.++ .-+....|+.--+.|..
T Consensus 100 -~~~~v~~~D~~~~g~~~~~~L~~ 122 (316)
T 1tjy_A 100 -RSYYINQGTPKQLGSMLVEMAAH 122 (316)
T ss_dssp -CSEEEESCCHHHHHHHHHHHHHH
T ss_pred -ceEEEecCCHHHHHHHHHHHHHH
Confidence 23334 34444455544444443
No 243
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=87.09 E-value=0.46 Score=35.61 Aligned_cols=42 Identities=19% Similarity=0.210 Sum_probs=30.9
Q ss_pred ccCccCCCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHHHhhh
Q 014830 147 RRGVAVPNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKLNRM 191 (417)
Q Consensus 147 ~~G~v~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KRLnrL 191 (417)
+....-|..||.|+.||..| ....|..|. .|.-++.-.....
T Consensus 8 H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~--~~c~~~~~~C~~C 49 (75)
T 2d9k_A 8 HEETECPLRLAVCQHCDLEL-SILKLKEHE--DYCGARTELCGNC 49 (75)
T ss_dssp CCCCCCCCCCEECSSSCCEE-CHHHHHHHH--HHHHHCEEECSSS
T ss_pred hCcccCCCcccCCcccChHh-hHHHHHHHH--hHcCCCceEcccC
Confidence 33444578899999999999 489999997 6777776444443
No 244
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=87.07 E-value=2.4 Score=37.00 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=51.4
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDND-FKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd 297 (417)
|+..+++..|+.+..... .+.+ .-...++.++.++++-||+.+-+.+ ...+++.++++|+..|+++.
T Consensus 23 gi~~~a~~~g~~~~~~~~-~~~~--~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~ 90 (306)
T 8abp_A 23 FADKAGKDLGFEVIKIAV-PDGE--KTLNAIDSLAASGAKGFVICTPDPKLGSAIVAKARGYDMKVIAVDD 90 (306)
T ss_dssp HHHHHHHHHTEEEEEEEC-CSHH--HHHHHHHHHHHTTCCEEEEECSCGGGHHHHHHHHHHTTCEEEEESS
T ss_pred HHHHHHHHcCCEEEEeCC-CCHH--HHHHHHHHHHHcCCCEEEEeCCCchhhHHHHHHHHHCCCcEEEeCC
Confidence 667788888999987644 3332 2345677788899999999986654 56679999999999999984
No 245
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=87.00 E-value=1.8 Score=38.34 Aligned_cols=96 Identities=14% Similarity=0.238 Sum_probs=64.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCCCCccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDSNRGLGQH 305 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ 305 (417)
.|+..++++.|+.+.......+.. .-...+..++.++++-||+..-+. .+.++++.+++.|+..|+++..... ..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~--~~ 97 (313)
T 3m9w_A 22 DIFVKKAESLGAKVFVQSANGNEE--TQMSQIENMINRGVDVLVIIPYNGQVLSNVVKEAKQEGIKVLAYDRMIND--AD 97 (313)
T ss_dssp HHHHHHHHHTSCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEEECSSTTSCHHHHHHHHTTTCEEEEESSCCTT--SC
T ss_pred HHHHHHHHHcCCEEEEECCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhhhHHHHHHHHHCCCeEEEECCcCCC--CC
Confidence 467888999999988765433332 123455667789999999987655 4678999999999999999874322 12
Q ss_pred cccccchhhhhcCcccccccc
Q 014830 306 ADLWVPWIEVENGELTERDLV 326 (417)
Q Consensus 306 ADl~fSW~eV~~Gk~~~~~~~ 326 (417)
.|.++.-+....|+.--+.|.
T Consensus 98 ~~~~V~~D~~~~g~~a~~~L~ 118 (313)
T 3m9w_A 98 IDFYISFDNEKVGELQAKALV 118 (313)
T ss_dssp CSEEEEECHHHHHHHHHHHHH
T ss_pred ceEEEecCHHHHHHHHHHHHH
Confidence 233444455555555444444
No 246
>2fn9_A Ribose ABC transporter, periplasmic ribose-bindin; RBP, ribose binding protein, periplasmic binding protein, thermophilic proteins; 1.40A {Thermotoga maritima} PDB: 2fn8_A*
Probab=86.93 E-value=1.9 Score=37.37 Aligned_cols=70 Identities=11% Similarity=0.157 Sum_probs=49.2
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.+.....+.. ...+.+..+..++++-|++.+-+. .+.++++.+++.++..|+++..
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (290)
T 2fn9_A 22 ETAKQRAEQLGYEATIFDSQNDTA--KESAHFDAIIAAGYDAIIFNPTDADGSIANVKRAKEAGIPVFCVDRG 92 (290)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSCTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 356677888888887664332222 123445566789999999986544 4567899999999999999864
No 247
>2ioy_A Periplasmic sugar-binding protein; ribose binding protein, thermophilic proteins; HET: RIP; 1.90A {Thermoanaerobacter tengcongensis}
Probab=86.50 E-value=2 Score=37.53 Aligned_cols=70 Identities=11% Similarity=0.211 Sum_probs=49.9
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+-......+... -.+.++.+++.+++-|++.+-+. ...+.++.++++|+..|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~~~~--~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (283)
T 2ioy_A 21 NGAEEKAKELGYKIIVEDSQNDSSK--ELSNVEDLIQQKVDVLLINPVDSDAVVTAIKEANSKNIPVITIDRS 91 (283)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHHH--HHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHhcCcEEEEecCCCCHHH--HHHHHHHHHHcCCCEEEEeCCchhhhHHHHHHHHHCCCeEEEecCC
Confidence 3667788888998876643333221 23456667789999999876543 4567889999999999999763
No 248
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=86.46 E-value=3 Score=36.49 Aligned_cols=97 Identities=11% Similarity=0.128 Sum_probs=61.8
Q ss_pred CCchHHHHhcceEEEEeC-CCchhHHHHHHHHHHHhhhCCcceEEEEeCC-cchHHHHHHHHHcCCcEEEEcCCCCcccc
Q 014830 227 YGLGSELRRAGVFVKTVR-DKPQAADWALKRQMQHSMSSGVDWMFLVSDD-NDFKEMLRKARDANLGTVVVGDSNRGLGQ 304 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~-dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD-sdF~~~Lr~AR~~~v~TVVVGd~~~~L~R 304 (417)
-|+..++++.|+.+..+. ...+.. ...+.+..++.++++-||+.+-+ ..+...++.++++|+..|+++.......+
T Consensus 24 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~~~~ 101 (305)
T 3g1w_A 24 KGFEDAAQALNVTVEYRGAAQYDIQ--EQITVLEQAIAKNPAGIAISAIDPVELTDTINKAVDAGIPIVLFDSGAPDSHA 101 (305)
T ss_dssp HHHHHHHHHHTCEEEEEECSSSCHH--HHHHHHHHHHHHCCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSCCTTSCC
T ss_pred HHHHHHHHHcCCEEEEeCCCcCCHH--HHHHHHHHHHHhCCCEEEEcCCCHHHHHHHHHHHHHCCCcEEEECCCCCCCce
Confidence 367788899999998742 222222 23455666778999999988744 45788999999999999999874322222
Q ss_pred ccccccchhhhhcCccccccccc
Q 014830 305 HADLWVPWIEVENGELTERDLVP 327 (417)
Q Consensus 305 ~ADl~fSW~eV~~Gk~~~~~~~~ 327 (417)
.. ++.-+....|+.--+-|..
T Consensus 102 ~~--~V~~d~~~~g~~~~~~l~~ 122 (305)
T 3g1w_A 102 HS--FLGTNNYNAGMNAAYKMAE 122 (305)
T ss_dssp SC--EEECCHHHHHHHHHHHHHH
T ss_pred eE--EECcCHHHHHHHHHHHHHH
Confidence 22 2333344444444344443
No 249
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=86.33 E-value=1.8 Score=38.33 Aligned_cols=98 Identities=13% Similarity=0.226 Sum_probs=64.7
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCCCCccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDSNRGLGQH 305 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ 305 (417)
.|+..++++.|+.+.......... .-...++.++.++++-||+.+-++ .....++.++++|+..|+++...... ..
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~giPvV~~~~~~~~~-~~ 99 (330)
T 3uug_A 23 NNIVKQLQEAGYKTDLQYADDDIP--NQLSQIENMVTKGVKVLVIASIDGTTLSDVLKQAGEQGIKVIAYDRLIRNS-GD 99 (330)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHHTCSEEEECCSSGGGGHHHHHHHHHTTCEEEEESSCCCSC-TT
T ss_pred HHHHHHHHHcCCEEEEeeCCCCHH--HHHHHHHHHHHcCCCEEEEEcCCchhHHHHHHHHHHCCCCEEEECCCCCCC-Cc
Confidence 367788889999988765333332 224556667789999999987665 57889999999999999998743221 11
Q ss_pred cccccchhhhhcCccccccccc
Q 014830 306 ADLWVPWIEVENGELTERDLVP 327 (417)
Q Consensus 306 ADl~fSW~eV~~Gk~~~~~~~~ 327 (417)
.+.++.-+....|+.--+.|..
T Consensus 100 ~~~~V~~D~~~~g~~a~~~l~~ 121 (330)
T 3uug_A 100 VSYYATFDNFQVGVLQATSITD 121 (330)
T ss_dssp CCEEEEECHHHHHHHHHHHHHH
T ss_pred eeEEEEeCHHHHHHHHHHHHHH
Confidence 2334444555555544444444
No 250
>2dri_A D-ribose-binding protein; sugar transport; HET: RIP; 1.60A {Escherichia coli} SCOP: c.93.1.1 PDB: 1urp_A* 1ba2_A 1dbp_A* 1drj_A* 1drk_A* 2gx6_A*
Probab=86.29 E-value=1.9 Score=37.44 Aligned_cols=70 Identities=14% Similarity=0.211 Sum_probs=49.9
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .-...+..+..++++-|++.+-+. .....++.++++++..|+++..
T Consensus 21 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~i~~~ 91 (271)
T 2dri_A 21 DGAQKEADKLGYNLVVLDSQNNPA--KELANVQDLTVRGTKILLINPTDSDAVGNAVKMANQANIPVITLDRQ 91 (271)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHTTTTEEEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCcEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCcEEEecCC
Confidence 467788889999887654332222 123455667789999999976443 4457889999999999999863
No 251
>1gud_A ALBP, D-allose-binding periplasmic protein; periplasmic binding protein, X-RAY crystallography, hinge bending, conformational change; 1.7A {Escherichia coli} SCOP: c.93.1.1 PDB: 1gub_A 1rpj_A*
Probab=85.01 E-value=1.9 Score=37.94 Aligned_cols=70 Identities=10% Similarity=0.099 Sum_probs=49.9
Q ss_pred CCchHHHHhcceEEEEeC--CCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVR--DKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~--dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.... ...++. .-...++.++.++++-|++++-+. ...+.++.++++++..|+++..
T Consensus 21 ~gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (288)
T 1gud_A 21 KGIEDEAKTLGVSVDIFASPSEGDFQ--SQLQLFEDLSNKNYKGIAFAPLSSVNLVMPVARAWKKGIYLVNLDEK 93 (288)
T ss_dssp HHHHHHHHHHTCCEEEEECSSTTCHH--HHHHHHHHHHTSSEEEEEECCSSSSTTHHHHHHHHHTTCEEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEECCC
Confidence 367788899999887653 222222 123445667789999999986554 4567889999999999999763
No 252
>2fep_A Catabolite control protein A; CCPA, transcriptional regulator; HET: SEP; 2.45A {Bacillus subtilis} PDB: 2nzu_G* 1sxh_A 1sxi_A 1sxg_A* 2nzv_G* 2oen_G*
Probab=84.84 E-value=2.8 Score=36.80 Aligned_cols=69 Identities=7% Similarity=0.061 Sum_probs=47.7
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......++. .....+..++.++++-||+.+-+.. .+.++.+++.++..|+++..
T Consensus 36 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 104 (289)
T 2fep_A 36 RGIEDIATMYKYNIILSNSDQNME--KELHLLNTMLGKQVDGIVFMGGNIT-DEHVAEFKRSPVPIVLAASV 104 (289)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHHSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHHhcCCCEEEEccc
Confidence 466777888888887654332222 1234455667899999999875433 56788888899999999764
No 253
>2rgy_A Transcriptional regulator, LACI family; 11011J, NYSGXRC, transctiptional regulator, SUG binding protein, structural genomics, PSI-2; 2.05A {Burkholderia phymatum}
Probab=84.60 E-value=2.3 Score=37.23 Aligned_cols=69 Identities=14% Similarity=0.133 Sum_probs=48.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHH---HHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKR---QMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkr---hm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .... .++.++.++++-|++.+-+.+ .+.++.+++.++..|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 99 (290)
T 2rgy_A 28 KQTDLELRAVHRHVVVATGCGEST--PREQALEAVRFLIGRDCDGVVVISHDLH-DEDLDELHRMHPKMVFLNRA 99 (290)
T ss_dssp HHHHHHHHHTTCEEEEECCCSSSC--HHHHHHHHHHHHHHTTCSEEEECCSSSC-HHHHHHHHHHCSSEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchh--hhhhHHHHHHHHHhcCccEEEEecCCCC-HHHHHHHhhcCCCEEEEccc
Confidence 467778888898887654332222 1122 455567899999999876555 56788888899999999764
No 254
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=84.54 E-value=3 Score=37.52 Aligned_cols=70 Identities=10% Similarity=0.059 Sum_probs=52.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+... -...++.+..++++-||+.+.+.+-..+...+++.++-.|+++..
T Consensus 83 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~iPvV~~~~~ 152 (338)
T 3dbi_A 83 FHAARMAEEKGRQLLLADGKHSAEE--ERQAIQYLLDLRCDAIMIYPRFLSVDEIDDIIDAHSQPIMVLNRR 152 (338)
T ss_dssp HHHHHHHHHTTCEEEEEECTTSHHH--HHHHHHHHHHTTCSEEEECCSSSCHHHHHHHHHHCSSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCChHH--HHHHHHHHHhCCCCEEEEeCCCCChHHHHHHHHcCCCCEEEEcCC
Confidence 3677888999999887754433321 233455667899999999987766677888899999999999864
No 255
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=84.54 E-value=2.9 Score=36.76 Aligned_cols=71 Identities=11% Similarity=0.130 Sum_probs=52.9
Q ss_pred CCchHHHHhcceEEEEeCCC--chhHHHHHHHHHHHhhhCCcceEEEEeC-CcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDK--PQAADWALKRQMQHSMSSGVDWMFLVSD-DNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dK--PqAAD~ALkrhm~~~m~rgv~cLvLVSD-DsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..+++..|+.+...... -+.+ ...+.++.++.++++.||+..- ...+...++.++++|+..|+++...
T Consensus 23 ~gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~giPvV~~~~~~ 96 (297)
T 3rot_A 23 QGAKKAAEELKVDLQILAPPGANDVP--KQVQFIESALATYPSGIATTIPSDTAFSKSLQRANKLNIPVIAVDTRP 96 (297)
T ss_dssp HHHHHHHHHHTCEEEEECCSSSCCHH--HHHHHHHHHHHTCCSEEEECCCCSSTTHHHHHHHHHHTCCEEEESCCC
T ss_pred HHHHHHHHHhCcEEEEECCCCcCCHH--HHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEcCCC
Confidence 46778888899999877532 1222 2345667778899999998764 4556889999999999999998643
No 256
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.52 E-value=0.11 Score=39.12 Aligned_cols=31 Identities=35% Similarity=0.563 Sum_probs=25.6
Q ss_pred cCCCCCeecccCCCCCCChHHHHHHHHHhhhhh
Q 014830 151 AVPNDPYICGVCGRKCKTNLDLKKHFKQLHERE 183 (417)
Q Consensus 151 v~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERE 183 (417)
.-|..||.|+.||+.|. ...|..|.+ +|..+
T Consensus 38 ~c~~~~~~C~~C~~~~~-~~~l~~H~~-~c~~~ 68 (75)
T 2d9k_A 38 YCGARTELCGNCGRNVL-VKDLKTHPE-VCGRE 68 (75)
T ss_dssp HHHHCEEECSSSCCEEE-TTGGGTHHH-HBTTB
T ss_pred HcCCCceEcccCCCcCc-HHHHHHHHH-HccCC
Confidence 34778999999999987 599999975 57765
No 257
>3k4h_A Putative transcriptional regulator; structural genomics, protein structure INI NEW YORK structural genomix research consortium; HET: MAL; 2.80A {Bacillus cytotoxicus nvh 391-98}
Probab=84.14 E-value=2.6 Score=36.48 Aligned_cols=70 Identities=10% Similarity=0.193 Sum_probs=51.1
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..++++.|+.+.......... .....+..+.+++++-||+++-+.. ...++.++++|+..|+++...
T Consensus 33 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~~ 102 (292)
T 3k4h_A 33 RGISSFAHVEGYALYMSTGETEEE--IFNGVVKMVQGRQIGGIILLYSREN-DRIIQYLHEQNFPFVLIGKPY 102 (292)
T ss_dssp HHHHHHHHHTTCEEEECCCCSHHH--HHHHHHHHHHTTCCCEEEESCCBTT-CHHHHHHHHTTCCEEEESCCS
T ss_pred HHHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHHCCCCEEEECCCC
Confidence 467788999999998875544333 2234455567799999998765433 378889999999999998743
No 258
>3brq_A HTH-type transcriptional regulator ASCG; transcriptional repressor structure escherichia coli, struct genomics, PSI-2; HET: FRU; 2.00A {Escherichia coli}
Probab=83.91 E-value=4.5 Score=34.81 Aligned_cols=69 Identities=10% Similarity=0.069 Sum_probs=48.2
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHH-cCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARD-ANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~-~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....++.+..++++-||+.+-+.+ ...+..+++ .++..|+++..
T Consensus 41 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 110 (296)
T 3brq_A 41 FHAARMAEEKGRQLLLADGKHSAE--EERQAIQYLLDLRCDAIMIYPRFLS-VDEIDDIIDAHSQPIMVLNRR 110 (296)
T ss_dssp HHHHHHHHHTTCEEEEECCTTSHH--HHHHHHHHHHHTTCSEEEEECSSSC-HHHHHHHHHTCSSCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHhcCCCEEEEecCCCC-hHHHHHHHhcCCCCEEEEccc
Confidence 356777888899888765443332 1233455667899999999876543 366788888 89999999763
No 259
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=83.90 E-value=2.9 Score=36.41 Aligned_cols=70 Identities=14% Similarity=0.146 Sum_probs=48.8
Q ss_pred CCchHHHHhcce-EEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGV-FVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDND-FKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV-~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+ .+.......+.. .....+..++.++++-||+.+-+.. ...+++.+++.++..|+++..
T Consensus 22 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 93 (309)
T 2fvy_A 22 KAIEQDAKAAPDVQLLMNDSQNDQS--KQNDQIDVLLAKGVKALAINLVDPAAAGTVIEKARGQNVPVVFFNKE 93 (309)
T ss_dssp HHHHHHHHTCTTEEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSGGGHHHHHHHHHTTTCCEEEESSC
T ss_pred HHHHHHHHhcCCeEEEEecCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCcchhHHHHHHHHHCCCcEEEecCC
Confidence 366777888886 776653322221 1234455667899999999876554 467899999999999999764
No 260
>2vk2_A YTFQ, ABC transporter periplasmic-binding protein YTFQ; transport protein, galactofuranose; HET: GZL; 1.20A {Escherichia coli}
Probab=83.69 E-value=2.4 Score=37.44 Aligned_cols=70 Identities=19% Similarity=0.323 Sum_probs=50.1
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDND-FKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+........+. ...+.+..++.++++-||+.+-+.. ..+.++.+++.++..|+++..
T Consensus 22 ~gi~~~a~~~g~~l~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 92 (306)
T 2vk2_A 22 NVAKSEAEKRGITLKIADGQQKQE--NQIKAVRSFVAQGVDAIFIAPVVATGWEPVLKEAKDAEIPVFLLDRS 92 (306)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHHTCSEEEECCSSSSSCHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHHcCCEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhhHHHHHHHHHHCCCCEEEecCC
Confidence 356778888899888764332222 1234455667889999999876543 467889999999999999864
No 261
>3d8u_A PURR transcriptional regulator; APC91343.1, vibrio parahaem RIMD 2210633, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.88A {Vibrio parahaemolyticus}
Probab=83.54 E-value=2.5 Score=36.27 Aligned_cols=69 Identities=9% Similarity=0.068 Sum_probs=48.0
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......++. .....+..+..++++-|++.+-+.+ ..+++.+++.++..|+++..
T Consensus 23 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 91 (275)
T 3d8u_A 23 PSFQQALNKAGYQLLLGYSDYSIE--QEEKLLSTFLESRPAGVVLFGSEHS-QRTHQLLEASNTPVLEIAEL 91 (275)
T ss_dssp HHHHHHHHHTSCEECCEECTTCHH--HHHHHHHHHHTSCCCCEEEESSCCC-HHHHHHHHHHTCCEEEESSS
T ss_pred HHHHHHHHHCCCEEEEEcCCCCHH--HHHHHHHHHHhcCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEeec
Confidence 466778888898877653332222 1234455667899999999875543 46788888899999999763
No 262
>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1
Probab=83.18 E-value=0.2 Score=35.61 Aligned_cols=20 Identities=10% Similarity=0.375 Sum_probs=16.3
Q ss_pred CCCCeecccCCCCCCChHHH
Q 014830 153 PNDPYICGVCGRKCKTNLDL 172 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL 172 (417)
...||.|++||+.|.....+
T Consensus 36 ~~k~~~C~~C~k~f~~~~~~ 55 (62)
T 1vd4_A 36 MTGTFRCTFCHTEVEEDESA 55 (62)
T ss_dssp TTTEEBCSSSCCBCEECTTC
T ss_pred CCCCEECCCCCCccccCccc
Confidence 35799999999999876554
No 263
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=83.00 E-value=2.8 Score=35.47 Aligned_cols=46 Identities=15% Similarity=0.188 Sum_probs=36.4
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCCC-Cccccc---cccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDSN-RGLGQH---ADLWVP 311 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~~-~~L~R~---ADl~fS 311 (417)
=+++|++|-+ .+-..+++.||++|++||.|.+.. +.|.+. ||..+.
T Consensus 110 ~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~la~~~~~ad~~l~ 162 (196)
T 2yva_A 110 GDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGPQDVEIR 162 (196)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHTTCCTTSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCchhhhcccCCCEEEE
Confidence 4677888865 456778889999999999999964 577887 887764
No 264
>1jx6_A LUXP protein; protein-ligand complex, signaling protein; HET: AI2; 1.50A {Vibrio harveyi} SCOP: c.93.1.1 PDB: 1zhh_A* 2hj9_A*
Probab=82.37 E-value=3 Score=37.36 Aligned_cols=69 Identities=7% Similarity=0.181 Sum_probs=47.2
Q ss_pred CchHHHHhcceEEEEe--CCC--chhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTV--RDK--PQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV--~dK--PqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+... ... -+.. .-...++.++.++++.||+.++.......++.+.++++..|++.+.
T Consensus 65 gi~~~a~~~g~~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~ip~V~~~~~ 137 (342)
T 1jx6_A 65 SFEKRLYKLNINYQLNQVFTRPNADIK--QQSLSLMEALKSKSDYLIFTLDTTRHRKFVEHVLDSTNTKLILQNI 137 (342)
T ss_dssp HHHHHHHHTTCCEEEEEEECCTTCCHH--HHHHHHHHHHHTTCSEEEECCSSSTTHHHHHHHHHHCSCEEEEETC
T ss_pred HHHHHHHHcCCeEEEEecCCCCccCHH--HHHHHHHHHHhcCCCEEEEeCChHhHHHHHHHHHHcCCCEEEEecC
Confidence 7778889999876654 111 1111 1234455667899999999554444578899999999999988554
No 265
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=82.13 E-value=0.27 Score=34.25 Aligned_cols=23 Identities=17% Similarity=0.355 Sum_probs=19.8
Q ss_pred CCCCCeecccCCCCCCChHHHHH
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKK 174 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~k 174 (417)
....||.|.+||+.|.+...|.+
T Consensus 14 ~~~~~~~C~~C~k~f~~~~~l~~ 36 (73)
T 2ctu_A 14 LGDRSQKCSKCGIIFIRRSTLSR 36 (73)
T ss_dssp CCCSEEECSSSCCEEECCCCCCC
T ss_pred CCCCCeeCCcccchhCCHHHhCc
Confidence 34679999999999999888876
No 266
>2h3h_A Sugar ABC transporter, periplasmic sugar-binding protein; glucose binding protein, periplasmic binding protein, GBP; HET: BGC; 1.70A {Thermotoga maritima} PDB: 2qvc_A* 3c6q_B*
Probab=82.12 E-value=4.5 Score=35.79 Aligned_cols=69 Identities=17% Similarity=0.235 Sum_probs=48.9
Q ss_pred CchHHHHhcceEEEEeC-CCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVR-DKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~-dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..+++..|+.+.... +..+++ ...+.++.++.++++-||+.+-++ .+..+++.++++|+..|+++..
T Consensus 21 gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 91 (313)
T 2h3h_A 21 GVKAAGKALGVDTKFFVPQKEDIN--AQLQMLESFIAEGVNGIAIAPSDPTAVIPTIKKALEMGIPVVTLDTD 91 (313)
T ss_dssp HHHHHHHHHTCEEEEECCSSSCHH--HHHHHHHHHHHTTCSEEEECCSSTTTTHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHcCCEEEEECCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChHHHHHHHHHHHHCCCeEEEeCCC
Confidence 56677788898888763 222222 123455666789999999876544 4678899999999999999764
No 267
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=81.73 E-value=4.6 Score=34.78 Aligned_cols=60 Identities=22% Similarity=0.404 Sum_probs=45.9
Q ss_pred hHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhh-CCcceEEEEeCCcchHH-HHHHHHHcCCcEEE
Q 014830 230 GSELRRAGVFVKTVRDKPQAADWALKRQMQHSMS-SGVDWMFLVSDDNDFKE-MLRKARDANLGTVV 294 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~-rgv~cLvLVSDDsdF~~-~Lr~AR~~~v~TVV 294 (417)
.+.++..||.|+|| ..||. ||.-|+.+.. -++.-+|.|-||...++ ++|+.+..|....+
T Consensus 19 kdiikkngfkvrtv-rspqe----lkdsieelvkkynativvvvvddkewaekairfvkslgaqvli 80 (134)
T 2l69_A 19 KDIIKKNGFKVRTV-RSPQE----LKDSIEELVKKYNATIVVVVVDDKEWAEKAIRFVKSLGAQVLI 80 (134)
T ss_dssp HHHHHHTTCEEEEE-CSHHH----HHHHHHHHTTCCCCEEEEEECSSHHHHHHHHHHHHHHCCCCEE
T ss_pred HHHHHhcCceEEEe-cCHHH----HHHHHHHHHHHhCCeEEEEEEccHHHHHHHHHHHHhcCCeEEE
Confidence 46789999999999 55663 6777887776 55666678888888864 78888888876533
No 268
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=81.24 E-value=3.5 Score=36.33 Aligned_cols=69 Identities=14% Similarity=0.153 Sum_probs=50.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....+..+..++++-||+++-+.+ .+.++.+++.|+..|+++..
T Consensus 47 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 115 (305)
T 3huu_A 47 NGINQACNVRGYSTRMTVSENSGD--LYHEVKTMIQSKSVDGFILLYSLKD-DPIEHLLNEFKVPYLIVGKS 115 (305)
T ss_dssp HHHHHHHHHHTCEEEECCCSSHHH--HHHHHHHHHHTTCCSEEEESSCBTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEeCCcCC-cHHHHHHHHcCCCEEEECCC
Confidence 477889999999998875444333 1233445566799999999864433 27788899999999999874
No 269
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=80.85 E-value=2.1 Score=35.97 Aligned_cols=69 Identities=16% Similarity=0.178 Sum_probs=50.5
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhh-CCcceEEEEeCCc---chHHHHHHHHHcCCcEEEEcCC-CCccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMS-SGVDWMFLVSDDN---DFKEMLRKARDANLGTVVVGDS-NRGLG 303 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~-rgv~cLvLVSDDs---dF~~~Lr~AR~~~v~TVVVGd~-~~~L~ 303 (417)
++..|.+.|+.+..+.+. . ... ..=+++|++|-+- +-..+++.|+++|.++|.|.+. .+.|.
T Consensus 55 ~~~~l~~~g~~~~~~~~~-~------------~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~ 121 (186)
T 1m3s_A 55 FAMRLMHMGFNAHIVGEI-L------------TPPLAEGDLVIIGSGSGETKSLIHTAAKAKSLHGIVAALTINPESSIG 121 (186)
T ss_dssp HHHHHHHTTCCEEETTST-T------------CCCCCTTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHH
T ss_pred HHHHHHhcCCeEEEeCcc-c------------ccCCCCCCEEEEEcCCCCcHHHHHHHHHHHHCCCEEEEEECCCCCchH
Confidence 456678899999888553 1 122 2246777777654 4566788999999999999996 46889
Q ss_pred ccccccc
Q 014830 304 QHADLWV 310 (417)
Q Consensus 304 R~ADl~f 310 (417)
+.||..+
T Consensus 122 ~~ad~~l 128 (186)
T 1m3s_A 122 KQADLII 128 (186)
T ss_dssp HHCSEEE
T ss_pred HhCCEEE
Confidence 9999766
No 270
>3e3m_A Transcriptional regulator, LACI family; structural genomics, DNA-binding, plasmid, transcription regulation, PSI-2; 1.60A {Silicibacter pomeroyi}
Probab=80.63 E-value=6.4 Score=35.80 Aligned_cols=97 Identities=12% Similarity=0.074 Sum_probs=60.9
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHA 306 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~A 306 (417)
.|+..++++.|+.+.......... .....+..++.++++-||++..+.. ...++.+++.++-.|+|++.... ..
T Consensus 90 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~~~-~~-- 163 (355)
T 3e3m_A 90 QSLTDVLEQGGLQLLLGYTAYSPE--REEQLVETMLRRRPEAMVLSYDGHT-EQTIRLLQRASIPIVEIWEKPAH-PI-- 163 (355)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTCCSEEEEECSCCC-HHHHHHHHHCCSCEEEESSCCSS-CS--
T ss_pred HHHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEECCccCC-CC--
Confidence 367788899999887764332222 1234455667899999999876544 36788899999999999874321 11
Q ss_pred ccccchhhhhcCcccccccccCC
Q 014830 307 DLWVPWIEVENGELTERDLVPRT 329 (417)
Q Consensus 307 Dl~fSW~eV~~Gk~~~~~~~~~~ 329 (417)
..++.-+....|..--+-|..+.
T Consensus 164 ~~~V~~D~~~~~~~a~~~L~~~G 186 (355)
T 3e3m_A 164 GHTVGFSNERAAYDMTNALLARG 186 (355)
T ss_dssp SEEEECCHHHHHHHHHHHHHHTT
T ss_pred CCEEEeChHHHHHHHHHHHHHCC
Confidence 12444444455544444444443
No 271
>3egc_A Putative ribose operon repressor; structural genomics, unknown function, DNA-binding, transcri transcription regulation, PSI-2; 2.35A {Burkholderia thailandensis}
Probab=80.27 E-value=1.9 Score=37.57 Aligned_cols=70 Identities=19% Similarity=0.201 Sum_probs=51.9
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..++++.|+.+.......... .....++.+.+++++-||+.+-+. ...+++.++++++..|+++...
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~-~~~~~~~~~~~~iPvV~~~~~~ 97 (291)
T 3egc_A 28 SGVESEARHKGYSVLLANTAEDIV--REREAVGQFFERRVDGLILAPSEG-EHDYLRTELPKTFPIVAVNREL 97 (291)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCCSS-CCHHHHHSSCTTSCEEEESSCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHHCCCCEEEEeCCCC-ChHHHHHhhccCCCEEEEeccc
Confidence 467788999999998775433332 123445556789999999988765 5678888899999999998743
No 272
>3hcw_A Maltose operon transcriptional repressor; RNA-binding, PSI-2, NYSGXRC, STRU genomics, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=79.97 E-value=4.3 Score=35.72 Aligned_cols=70 Identities=13% Similarity=0.188 Sum_probs=49.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..++++.|+.+.......+.. .....+..+..++++-||+++-+.. ..+++.+++.++..|+++...
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 101 (295)
T 3hcw_A 32 LGISETCNQHGYGTQTTVSNNMND--LMDEVYKMIKQRMVDAFILLYSKEN-DPIKQMLIDESMPFIVIGKPT 101 (295)
T ss_dssp HHHHHHHHTTTCEEEECCCCSHHH--HHHHHHHHHHTTCCSEEEESCCCTT-CHHHHHHHHTTCCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEcCCCChH--HHHHHHHHHHhCCcCEEEEcCcccC-hHHHHHHHhCCCCEEEECCCC
Confidence 467788999999998765433332 1233445566799999999864432 367888899999999998743
No 273
>3brs_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; 2.00A {Clostridium phytofermentans}
Probab=79.89 E-value=2.4 Score=36.65 Aligned_cols=69 Identities=10% Similarity=0.208 Sum_probs=48.6
Q ss_pred CchHHHHhcceEEEEeCC--CchhHHHHHHHHHHHhhhCCcceEEEEeCC-cchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRD--KPQAADWALKRQMQHSMSSGVDWMFLVSDD-NDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~d--KPqAAD~ALkrhm~~~m~rgv~cLvLVSDD-sdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+..+.. .-++. .....++.++.++++.|++.+-+ ..+.++++.+++.++..|+++..
T Consensus 28 gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 99 (289)
T 3brs_A 28 GAQMAAKEYEIKLEFMAPEKEEDYL--VQNELIEEAIKRKPDVILLAAADYEKTYDAAKEIKDAGIKLIVIDSG 99 (289)
T ss_dssp HHHHHHHHHTCEEEECCCSSTTCHH--HHHHHHHHHHHTCCSEEEECCSCTTTTHHHHTTTGGGTCEEEEESSC
T ss_pred HHHHHHHHcCCEEEEecCCCCCCHH--HHHHHHHHHHHhCCCEEEEeCCChHHhHHHHHHHHHCCCcEEEECCC
Confidence 677788888999887642 11211 12334555678999999988654 44567888888999999999764
No 274
>3kjx_A Transcriptional regulator, LACI family; LACL family, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.33A {Silicibacter pomeroyi}
Probab=79.22 E-value=5.2 Score=36.14 Aligned_cols=69 Identities=10% Similarity=0.042 Sum_probs=48.5
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
|+..++++.|+.+.......+.. .....+..++.++++-||+++-+.+ ...++.+++.++..|++++..
T Consensus 89 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~i~~l~~~~vdGiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~~ 157 (344)
T 3kjx_A 89 GINQVLEDTELQPVVGVTDYLPE--KEEKVLYEMLSWRPSGVIIAGLEHS-EAARAMLDAAGIPVVEIMDSD 157 (344)
T ss_dssp HHHHHHTSSSSEEEEEECTTCHH--HHHHHHHHHHTTCCSEEEEECSCCC-HHHHHHHHHCSSCEEEEEECS
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEECCCCC-HHHHHHHHhCCCCEEEEeCCC
Confidence 66778888888887653332222 1234455677899999999875433 267888999999999998743
No 275
>3d02_A Putative LACI-type transcriptional regulator; periplasmic sugar-binding protein, structura genomics; HET: MSE GOL; 1.30A {Klebsiella pneumoniae subsp}
Probab=79.21 E-value=6.8 Score=34.07 Aligned_cols=70 Identities=17% Similarity=0.231 Sum_probs=48.6
Q ss_pred CCchHHHHhcceEEEEeC-CCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVR-DKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~-dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
-|+..++++.|+.+..+. ...+.. .....+..++.++++-||+.+-++ ....+++.+.+.++..|+++..
T Consensus 24 ~g~~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~ipvV~~~~~ 95 (303)
T 3d02_A 24 EGVVQAGKEFNLNASQVGPSSTDAP--QQVKIIEDLIARKVDAITIVPNDANVLEPVFKKARDAGIVVLTNESP 95 (303)
T ss_dssp HHHHHHHHHTTEEEEEECCSSSCHH--HHHHHHHHHHHTTCSEEEECCSCHHHHHHHHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHHHcCCEEEEECCCCCCHH--HHHHHHHHHHHcCCCEEEEecCChHHHHHHHHHHHHCCCeEEEEecC
Confidence 366777888899887543 222222 123445566789999999887654 3457889999999999998764
No 276
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=79.03 E-value=8.3 Score=33.29 Aligned_cols=97 Identities=8% Similarity=0.038 Sum_probs=61.0
Q ss_pred CCchHHHHhc-ceEEEEeC---CCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-chHHHHHHHHHcCCcEEEEcCCCCc
Q 014830 227 YGLGSELRRA-GVFVKTVR---DKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-DFKEMLRKARDANLGTVVVGDSNRG 301 (417)
Q Consensus 227 YGLA~ELkRA-GV~VrtV~---dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-dF~~~Lr~AR~~~v~TVVVGd~~~~ 301 (417)
.|+..++++. |+.|.+.. +..+.. .....+..++.++++-||+++-+. ....+++.+++.|+..|+++.....
T Consensus 29 ~gi~~~a~~~~g~~~~~~~~~~~~~~~~--~~~~~i~~l~~~~vdgiii~~~~~~~~~~~~~~~~~~~iPvV~~~~~~~~ 106 (304)
T 3gbv_A 29 KGIREAVTTYSDFNISANITHYDPYDYN--SFVATSQAVIEEQPDGVMFAPTVPQYTKGFTDALNELGIPYIYIDSQIKD 106 (304)
T ss_dssp HHHHHHHHHTGGGCEEEEEEEECSSCHH--HHHHHHHHHHTTCCSEEEECCSSGGGTHHHHHHHHHHTCCEEEESSCCTT
T ss_pred HHHHHHHHHHHhCCeEEEEEcCCCCCHH--HHHHHHHHHHhcCCCEEEECCCChHHHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 3667778877 77777642 221222 234556667889999999998766 4788999999999999999874322
Q ss_pred cccccccccchhhhhcCccccccccc
Q 014830 302 LGQHADLWVPWIEVENGELTERDLVP 327 (417)
Q Consensus 302 L~R~ADl~fSW~eV~~Gk~~~~~~~~ 327 (417)
..+. .++.-+....|+.--+-|..
T Consensus 107 ~~~~--~~V~~D~~~~g~~a~~~l~~ 130 (304)
T 3gbv_A 107 APPL--AFFGQNSHQSGYFAARMLML 130 (304)
T ss_dssp SCCS--EEEECCHHHHHHHHHHHHHH
T ss_pred CCce--EEEecChHHHHHHHHHHHHH
Confidence 2222 23333444444444344443
No 277
>1pea_A Amidase operon; gene regulator, receptor, binding protein; 2.10A {Pseudomonas aeruginosa} SCOP: c.93.1.1 PDB: 1qo0_A 1qnl_A
Probab=78.85 E-value=1.7 Score=39.72 Aligned_cols=66 Identities=17% Similarity=0.140 Sum_probs=43.6
Q ss_pred hHHHHhcceEEEE---eCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc---EEEEcC
Q 014830 230 GSELRRAGVFVKT---VRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG---TVVVGD 297 (417)
Q Consensus 230 A~ELkRAGV~Vrt---V~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~---TVVVGd 297 (417)
...|+++|..|.. ++..+...| ....+..+...+++.|++.+++..-..+++.++++|++ ..++|.
T Consensus 161 ~~~l~~~G~~v~~~~~~~~~~~~~d--~~~~~~~l~~~~pdaI~~~~~~~~a~~~~~~~~~~G~~~~~~~~~~~ 232 (385)
T 1pea_A 161 RHLYRQHGGTVLEEIYIPLYPSDDD--LQRAVERIYQARADVVFSTVVGTGTAELYRAIARRYGDGRRPPIASL 232 (385)
T ss_dssp HHHHHHTTCEEEEEEEECSSCCHHH--HHHHHHHHHHHTCSEEEEECCTHHHHHHHHHHHHHHCSSCCCCEEES
T ss_pred HHHHHHcCCEEEEEEeecCCCCcch--HHHHHHHHHHCCCCEEEEecccccHHHHHHHHHHcCCCcCCceEEec
Confidence 3456666765432 322122333 33455555666899999999888999999999999998 335554
No 278
>3e61_A Putative transcriptional repressor of ribose OPER; structural genomics, DNA-binding, transcripti regulation, PSI-2; 2.00A {Staphylococcus saprophyticus subsp}
Probab=78.57 E-value=2.5 Score=36.47 Aligned_cols=93 Identities=11% Similarity=0.074 Sum_probs=58.0
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHH-HHHHcCCcEEEEcCCCCccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLR-KARDANLGTVVVGDSNRGLGQH 305 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr-~AR~~~v~TVVVGd~~~~L~R~ 305 (417)
.|+..++++.|+.+.......+... ....+..+.+++++.||+.+-+ .+.++ .+++.|+..|+++.......
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~~dgiIi~~~~---~~~~~~~l~~~~iPvV~~~~~~~~~~-- 100 (277)
T 3e61_A 28 RGVEDVALAHGYQVLIGNSDNDIKK--AQGYLATFVSHNCTGMISTAFN---ENIIENTLTDHHIPFVFIDRINNEHN-- 100 (277)
T ss_dssp HHHHHHHHHTTCCEEEEECTTCHHH--HHHHHHHHHHTTCSEEEECGGG---HHHHHHHHHHC-CCEEEGGGCC------
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHHH--HHHHHHHHHhCCCCEEEEecCC---hHHHHHHHHcCCCCEEEEeccCCCCC--
Confidence 4677888999998887654444331 2344555678999999998833 55688 89999999999987532222
Q ss_pred cccccchhhhhcCcccccccccCC
Q 014830 306 ADLWVPWIEVENGELTERDLVPRT 329 (417)
Q Consensus 306 ADl~fSW~eV~~Gk~~~~~~~~~~ 329 (417)
++.-+....|+.--+-|....
T Consensus 101 ---~V~~D~~~~g~~a~~~L~~~G 121 (277)
T 3e61_A 101 ---GISTNHFKGGQLQAEVVRKGK 121 (277)
T ss_dssp --------HHHHHHHHHHHHHHTT
T ss_pred ---eEEechHHHHHHHHHHHHHCC
Confidence 666666666665555555543
No 279
>3c3k_A Alanine racemase; structural genomics, protein structure initiative, NEW YORK research center for structural genomics, nysgxrc; 1.99A {Actinobacillus succinogenes}
Probab=78.49 E-value=5.2 Score=34.88 Aligned_cols=68 Identities=10% Similarity=0.059 Sum_probs=46.1
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....+..++.++++-|++++-+.+ .+.++.++ .++..|+++..
T Consensus 28 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~-~~iPvV~~~~~ 95 (285)
T 3c3k_A 28 KGIEKTAEKNGYRILLCNTESDLA--RSRSCLTLLSGKMVDGVITMDALSE-LPELQNII-GAFPWVQCAEY 95 (285)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHTHHHHTTCCSEEEECCCGGG-HHHHHHHH-TTSSEEEESSC
T ss_pred HHHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHh-cCCCEEEEccc
Confidence 356777888898887664332222 1234455667899999999865433 35677777 99999999764
No 280
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=78.40 E-value=0.97 Score=37.32 Aligned_cols=23 Identities=39% Similarity=0.788 Sum_probs=19.5
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLH 180 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLH 180 (417)
.-.+|-.||++|++ |.+|+.+-|
T Consensus 20 d~iiClecGK~fK~---LkRHL~~~h 42 (87)
T 2jsp_A 20 DHIVCLECGGSFKS---LKRHLTTHH 42 (87)
T ss_dssp SCEECTBTCCEESB---HHHHHHHTT
T ss_pred CceEecccchhhHH---HHHHHHHcc
Confidence 45699999999995 779998866
No 281
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=78.04 E-value=2.7 Score=35.10 Aligned_cols=75 Identities=9% Similarity=0.127 Sum_probs=51.2
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhC-CcceEEEEeCCc---chHHHHHHHHHcCCcEEEEcCC-CCccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSS-GVDWMFLVSDDN---DFKEMLRKARDANLGTVVVGDS-NRGLG 303 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~r-gv~cLvLVSDDs---dF~~~Lr~AR~~~v~TVVVGd~-~~~L~ 303 (417)
++..|.+.|..+..+.+.- . + +. ..... .=+++|++|-+- +-..+++.|+++|+++|.|.+. .+.|.
T Consensus 67 ~~~~l~~~g~~~~~~~~~~-~----~--~~-~~~~~~~~d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s~la 138 (183)
T 2xhz_A 67 MAATFASTGTPSFFVHPGE-A----A--HG-DLGMVTPQDVVIAISNSGESSEITALIPVLKRLHVPLICITGRPESSMA 138 (183)
T ss_dssp HHHHHHTTTCCEEECCTTH-H----H--HH-TSTTCCTTCEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESCTTSHHH
T ss_pred HHHHHHhcCceEEEeCchH-H----h--hh-hhccCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChhH
Confidence 4566778899988885321 1 1 11 11122 346778888654 4566788899999999999995 46899
Q ss_pred cccccccc
Q 014830 304 QHADLWVP 311 (417)
Q Consensus 304 R~ADl~fS 311 (417)
+.||..+.
T Consensus 139 ~~ad~~l~ 146 (183)
T 2xhz_A 139 RAADVHLC 146 (183)
T ss_dssp HHSSEEEE
T ss_pred HhCCEEEE
Confidence 99997653
No 282
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=77.83 E-value=2 Score=36.20 Aligned_cols=46 Identities=15% Similarity=0.178 Sum_probs=37.3
Q ss_pred CcceEEEEeCCc---chHHHHHHHHHcCCcEEEEcCC-CCcccccccccc
Q 014830 265 GVDWMFLVSDDN---DFKEMLRKARDANLGTVVVGDS-NRGLGQHADLWV 310 (417)
Q Consensus 265 gv~cLvLVSDDs---dF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ADl~f 310 (417)
.=+++|++|-+- +-..+++.||++|.++|.|.+. .+.|.+.||..+
T Consensus 116 ~~d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~~~s~L~~~ad~~l 165 (198)
T 2xbl_A 116 EGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLL 165 (198)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECSCCCTHHHHCSEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECCCCCcHHHhCCEEE
Confidence 347788888654 5677888999999999999985 468999999766
No 283
>2iks_A DNA-binding transcriptional dual regulator; escherichia coli structural genomics, PSI-2, protein structure initiative; 1.85A {Escherichia coli}
Probab=77.82 E-value=2.6 Score=36.89 Aligned_cols=70 Identities=13% Similarity=0.121 Sum_probs=48.2
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....+..++.++++-||+++-+..-..+++.+++.++..|+++..
T Consensus 40 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 109 (293)
T 2iks_A 40 NYLERQARQRGYQLLIACSEDQPD--NEMRCIEHLLQRQVDAIIVSTSLPPEHPFYQRWANDPFPIVALDRA 109 (293)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSCTTCHHHHTTTTSSSCEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEcCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHhCCCCEEEECCc
Confidence 467778888999887654332222 1234455667899999999875543245777888899999999763
No 284
>3kke_A LACI family transcriptional regulator; structural genomics, DNA-binding, transcription regulation, PSI-2; 2.20A {Mycobacterium smegmatis str}
Probab=77.63 E-value=4.8 Score=35.57 Aligned_cols=70 Identities=11% Similarity=0.050 Sum_probs=49.9
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..++++.|+.+.......+... ....+..+..++++-||+++-+..-.+.+..+.+ ++..|+++...
T Consensus 35 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiI~~~~~~~~~~~~~~l~~-~iPvV~i~~~~ 104 (303)
T 3kke_A 35 SGVQMAASGHSTDVLLGQIDAPPRG--TQQLSRLVSEGRVDGVLLQRREDFDDDMLAAVLE-GVPAVTINSRV 104 (303)
T ss_dssp HHHHHHHHHTTCCEEEEECCSTTHH--HHHHHHHHHSCSSSEEEECCCTTCCHHHHHHHHT-TSCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEeCCCChHH--HHHHHHHHHhCCCcEEEEecCCCCcHHHHHHHhC-CCCEEEECCcC
Confidence 4678889999999887654443331 2344555678999999998765553327777888 99999998743
No 285
>3h5o_A Transcriptional regulator GNTR; transcription regulator, GNTR,chromobacterium violaceum, PSI, SGX, DNA-binding; 2.30A {Chromobacterium violaceum}
Probab=77.61 E-value=6.1 Score=35.57 Aligned_cols=96 Identities=16% Similarity=0.117 Sum_probs=61.0
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHA 306 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~A 306 (417)
.|+..++++.|+.+.......+.. .....+..++.++++-||+++-+..- .++..+++.++-.|++++.... ..
T Consensus 82 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~~~~---~~ 155 (339)
T 3h5o_A 82 TGIETVLDAAGYQMLIGNSHYDAG--QELQLLRAYLQHRPDGVLITGLSHAE-PFERILSQHALPVVYMMDLADD---GR 155 (339)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHTTCCSEEEEECSCCCT-THHHHHHHTTCCEEEEESCCSS---SC
T ss_pred HHHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHcCCCCEEEEeCCCCCH-HHHHHHhcCCCCEEEEeecCCC---CC
Confidence 367788899999988764433322 12345566678999999998744332 6788889999999999764311 11
Q ss_pred ccccchhhhhcCcccccccccCC
Q 014830 307 DLWVPWIEVENGELTERDLVPRT 329 (417)
Q Consensus 307 Dl~fSW~eV~~Gk~~~~~~~~~~ 329 (417)
+ ++..+....|..--+-|....
T Consensus 156 ~-~V~~D~~~~~~~a~~~L~~~G 177 (339)
T 3h5o_A 156 C-CVGFSQEDAGAAITRHLLSRG 177 (339)
T ss_dssp C-EEECCHHHHHHHHHHHHHHTT
T ss_pred e-EEEECHHHHHHHHHHHHHHCC
Confidence 2 555555555554444444443
No 286
>2x7x_A Sensor protein; transferase, sensor histidine kinase; HET: FRU; 2.64A {Bacteroides thetaiotaomicron}
Probab=77.59 E-value=5.7 Score=35.54 Aligned_cols=69 Identities=14% Similarity=0.224 Sum_probs=46.9
Q ss_pred CchHHHHhc-ceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRA-GVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDND-FKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRA-GV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++. |+.+.......++. .....+..++.++++-|++.+-+.+ +.+.++.+.+.++..|+++..
T Consensus 26 gi~~~a~~~~g~~l~i~~~~~~~~--~~~~~i~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 96 (325)
T 2x7x_A 26 EILREAMFYNGVSVEIRSAGDDNS--KQAEDVHYFMDEGVDLLIISANEAAPMTPIVEEAYQKGIPVILVDRK 96 (325)
T ss_dssp HHHHHHTTSSSCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSSHHHHHHHHHHHHHTTCCEEEESSC
T ss_pred HHHHHHHHcCCcEEEEeCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEeCCC
Confidence 555666676 88777653322222 1233455567899999999876543 467888899999999999763
No 287
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=77.59 E-value=4.4 Score=33.82 Aligned_cols=69 Identities=20% Similarity=0.258 Sum_probs=50.3
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhh-CCcceEEEEeCCc---chHHHHHHHHHcCCcEEEEcCC-CCccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMS-SGVDWMFLVSDDN---DFKEMLRKARDANLGTVVVGDS-NRGLG 303 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~-rgv~cLvLVSDDs---dF~~~Lr~AR~~~v~TVVVGd~-~~~L~ 303 (417)
++..|.+.|..|..+.+- . ... ..=+++|++|-+- +...+++.|+++|.++|.|.+. .+ |.
T Consensus 58 ~~~~l~~~g~~~~~~~~~-~------------~~~~~~~d~vi~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~~~s-l~ 123 (180)
T 1jeo_A 58 FAMRLMHLGFKSYFVGET-T------------TPSYEKDDLLILISGSGRTESVLTVAKKAKNINNNIIAIVCECGN-VV 123 (180)
T ss_dssp HHHHHHHTTCCEEETTST-T------------CCCCCTTCEEEEEESSSCCHHHHHHHHHHHTTCSCEEEEESSCCG-GG
T ss_pred HHHHHHHcCCeEEEeCCC-c------------cccCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCh-HH
Confidence 455678899999888543 1 112 2246778888654 4567788899999999999996 46 99
Q ss_pred cccccccc
Q 014830 304 QHADLWVP 311 (417)
Q Consensus 304 R~ADl~fS 311 (417)
+.||..+.
T Consensus 124 ~~ad~~l~ 131 (180)
T 1jeo_A 124 EFADLTIP 131 (180)
T ss_dssp GGCSEEEE
T ss_pred HhCCEEEE
Confidence 99997664
No 288
>2rjo_A Twin-arginine translocation pathway signal protei; PSI-2, NYSGXRC, twin arginine translocation pathway signal P structural genomics; HET: GAL; 2.05A {Burkholderia phytofirmans}
Probab=77.55 E-value=3.7 Score=36.78 Aligned_cols=70 Identities=7% Similarity=0.018 Sum_probs=49.1
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCC--cceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSG--VDWMFLVSDDND-FKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rg--v~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......++. .....+..++..+ ++-||+.+-+.+ ..++++.+++.++..|+++..
T Consensus 25 ~gi~~~a~~~g~~l~~~~~~~~~~--~~~~~i~~l~~~~~~vdgiIi~~~~~~~~~~~~~~~~~~~iPvV~~~~~ 97 (332)
T 2rjo_A 25 KGAQSFAKSVGLPYVPLTTEGSSE--KGIADIRALLQKTGGNLVLNVDPNDSADARVIVEACSKAGAYVTTIWNK 97 (332)
T ss_dssp HHHHHHHHHHTCCEEEEECTTCHH--HHHHHHHHHHHHTTTCEEEEECCSSHHHHHHHHHHHHHHTCEEEEESCC
T ss_pred HHHHHHHHHcCCEEEEecCCCCHH--HHHHHHHHHHHCCCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEECCC
Confidence 466777888888887664332222 1233455567778 999999876654 457889999999999999864
No 289
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=77.07 E-value=1.1 Score=31.74 Aligned_cols=25 Identities=28% Similarity=0.583 Sum_probs=23.1
Q ss_pred eecccCCCCCCChHHHHHHHHHhhh
Q 014830 157 YICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 157 Y~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
.-|+.|-+|+..-.+|+||.|.-|.
T Consensus 10 qhcrfckkkysdvknlikhire~hd 34 (37)
T 2elu_A 10 QHCRFCKKKYSDVKNLIKHIRDAHD 34 (37)
T ss_dssp CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 4799999999999999999998885
No 290
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=76.75 E-value=1.7 Score=37.00 Aligned_cols=46 Identities=15% Similarity=0.272 Sum_probs=36.7
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCCC-Cccccc---cccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDSN-RGLGQH---ADLWVP 311 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~~-~~L~R~---ADl~fS 311 (417)
=|++|++|-+ .+-..+++.||++|++||.|.+.. +.|.+. ||..+.
T Consensus 114 ~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~~~~~ad~~l~ 166 (199)
T 1x92_A 114 GDVLLAISTSGNSANVIQAIQAAHDREMLVVALTGRDGGGMASLLLPEDVEIR 166 (199)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHCCTTCEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCcHHhccccCCEEEE
Confidence 4677888764 456778899999999999999964 578888 997764
No 291
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=76.74 E-value=1.5 Score=36.70 Aligned_cols=45 Identities=18% Similarity=0.203 Sum_probs=37.2
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccccccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQHADLWV 310 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ADl~f 310 (417)
=+++|++|-+ .+-..+++.||++|+++|.|.+. .+.|.+.||..+
T Consensus 111 ~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~L~~~ad~~l 159 (188)
T 1tk9_A 111 KDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGKGGGMMNKLCDHNL 159 (188)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEGGGTTHHHHCSEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCCCcchHHcCCEEE
Confidence 4778888864 56778889999999999999885 468999999876
No 292
>2o20_A Catabolite control protein A; CCPA, transcriptional regulator, helix-turn-helix, transcrip; 1.90A {Lactococcus lactis}
Probab=76.24 E-value=7.2 Score=35.01 Aligned_cols=68 Identities=12% Similarity=0.148 Sum_probs=46.2
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+.......+.. .....+..+..++++.|++++-+.+ .+.++.+++.++..|+++..
T Consensus 84 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 151 (332)
T 2o20_A 84 GVDDIASMYKYNMILANSDNDVE--KEEKVLETFLSKQVDGIVYMGSSLD-EKIRTSLKNSRTPVVLVGTI 151 (332)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECSSCCC-HHHHHHHHHHCCCEEEESCC
T ss_pred HHHHHHHHcCCEEEEEECCCChH--HHHHHHHHHHhCCCCEEEEeCCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 56677778888887664333322 1233455567899999999874333 35677778889999999864
No 293
>3bbl_A Regulatory protein of LACI family; protein structure initiative II, PSI-II, NYSGXRC, transcript regulator, periplasmic binding protein; 2.35A {Chloroflexus aggregans}
Probab=75.96 E-value=3.5 Score=36.08 Aligned_cols=69 Identities=16% Similarity=0.072 Sum_probs=46.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......++. .....+..++.++++-||+.+-+.+ ...++.+++.++..|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~~~~~ 96 (287)
T 3bbl_A 28 SSMVREAGAVNYFVLPFPFSEDRS--QIDIYRDLIRSGNVDGFVLSSINYN-DPRVQFLLKQKFPFVAFGRS 96 (287)
T ss_dssp HHHHHHHHHTTCEEEECCCCSSTT--CCHHHHHHHHTTCCSEEEECSCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCchH--HHHHHHHHHHcCCCCEEEEeecCCC-cHHHHHHHhcCCCEEEECCc
Confidence 366778888999887654222211 0123345567899999999865433 26788888899999999763
No 294
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=75.62 E-value=2.7 Score=36.65 Aligned_cols=78 Identities=13% Similarity=0.184 Sum_probs=51.3
Q ss_pred HHhcceEEEEeCCCchhH--------HHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCCC-C
Q 014830 233 LRRAGVFVKTVRDKPQAA--------DWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDSN-R 300 (417)
Q Consensus 233 LkRAGV~VrtV~dKPqAA--------D~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~~-~ 300 (417)
|.|.|+.+..+.|..... +..++.++...+.. =+++|++|-+ .+-..+++.||++|++||.|.+.. +
T Consensus 92 ~~~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~~~s 170 (212)
T 2i2w_A 92 ENRPGYPAIAISDVSHISCVGNDFGFNDIFSRYVEAVGRE-GDVLLGISTSGNSANVIKAIAAAREKGMKVITLTGKDGG 170 (212)
T ss_dssp TTSSSCSEEECCCTTCGGGGSCCCSCSSHHHHHHHHHCCT-TCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEETTCG
T ss_pred ccCCCCeEEecCChHHhhHhhccCCHHHHHHHHHHhcCCC-CCEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECCCCC
Confidence 456788887776432210 01122333222333 4778888864 456778889999999999999864 6
Q ss_pred ccccccccccc
Q 014830 301 GLGQHADLWVP 311 (417)
Q Consensus 301 ~L~R~ADl~fS 311 (417)
.|.+.||..+.
T Consensus 171 ~La~~aD~~l~ 181 (212)
T 2i2w_A 171 KMAGTADIEIR 181 (212)
T ss_dssp GGTTCSSEEEE
T ss_pred chHHhCCEEEE
Confidence 89999998765
No 295
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=75.50 E-value=3.1 Score=36.53 Aligned_cols=47 Identities=11% Similarity=0.239 Sum_probs=38.4
Q ss_pred CcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccccc---ccccc
Q 014830 265 GVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQHA---DLWVP 311 (417)
Q Consensus 265 gv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~A---Dl~fS 311 (417)
.=|++|.+|-+ .+-..+++.|+++|+++|.|.+. .+.|.+.| |+.+.
T Consensus 114 ~~Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~~~s~la~~a~~~d~~l~ 167 (201)
T 3trj_A 114 EDDILLVITTSGDSENILSAVEEAHDLEMKVIALTGGSGGALQNMYNTDDIELR 167 (201)
T ss_dssp TTCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEETTCCGGGGTCCTTCEEEE
T ss_pred CCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECCCCCHHHHhhccCCEEEE
Confidence 34788888865 56778899999999999999885 46899999 97664
No 296
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=75.11 E-value=2 Score=31.99 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=23.8
Q ss_pred CCeecc--cCCCCCCChHHHHHHHHHhh
Q 014830 155 DPYICG--VCGRKCKTNLDLKKHFKQLH 180 (417)
Q Consensus 155 ~PY~C~--VCGRkf~T~~kL~kHFKQLH 180 (417)
.+|.|. -|++.++...+|++|++.-|
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 489998 99999999999999999766
No 297
>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*
Probab=75.04 E-value=1.6 Score=40.46 Aligned_cols=25 Identities=24% Similarity=0.490 Sum_probs=22.4
Q ss_pred CCCeecccCCCCCCC-hHHHHHHHHH
Q 014830 154 NDPYICGVCGRKCKT-NLDLKKHFKQ 178 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T-~~kL~kHFKQ 178 (417)
..|.+|..||..|.+ =.+|+.|+++
T Consensus 167 ~~~L~C~~C~~~f~n~~~~LK~HL~~ 192 (204)
T 3sp4_A 167 QEDLKCWRCGETFGRHFTKLKAHLQE 192 (204)
T ss_dssp GSCCBCTTTCCBCTTCHHHHHHHHHH
T ss_pred CCCceeCCCCchhhcccHHHHHHHHH
Confidence 369999999999998 9999999875
No 298
>3bil_A Probable LACI-family transcriptional regulator; structural genomics, unknown function, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum atcc 13032}
Probab=75.00 E-value=6.2 Score=35.98 Aligned_cols=68 Identities=18% Similarity=0.276 Sum_probs=45.1
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+.......+.. .....+..+..++++-||+.+-+.+ ...++.+++.++..|+++..
T Consensus 87 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~i~~~ 154 (348)
T 3bil_A 87 EIQSTASKAGLATIITNSNEDAT--TMSGSLEFLTSHGVDGIICVPNEEC-ANQLEDLQKQGMPVVLVDRE 154 (348)
T ss_dssp HHHHHHHHTTCCEEEEECTTCHH--HHHHHHHHHHHTTCSCEEECCCGGG-HHHHHHHHHC-CCEEEESSC
T ss_pred HHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHhCCCCEEEEeCCCCC-hHHHHHHHhCCCCEEEEccc
Confidence 55667777787776653322222 1233455567899999999875544 46788888899999999763
No 299
>3k9c_A Transcriptional regulator, LACI family protein; PSI-II, 11026W, structural genomics, PR structure initiative; 2.14A {Rhodococcus jostii}
Probab=74.66 E-value=4.9 Score=35.22 Aligned_cols=67 Identities=21% Similarity=0.152 Sum_probs=47.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......... -.+.+..+..++++-||+.+-+.+- ..++.+.+ ++..|+++..
T Consensus 31 ~gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiIi~~~~~~~-~~~~~~~~-~iPvV~i~~~ 97 (289)
T 3k9c_A 31 EQIYAAATRRGYDVMLSAVAPSRA---EKVAVQALMRERCEAAILLGTRFDT-DELGALAD-RVPALVVARA 97 (289)
T ss_dssp HHHHHHHHHTTCEEEEEEEBTTBC---HHHHHHHHTTTTEEEEEEETCCCCH-HHHHHHHT-TSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCCHH---HHHHHHHHHhCCCCEEEEECCCCCH-HHHHHHHc-CCCEEEEcCC
Confidence 366788888998887654332221 2345566788999999999755443 67777776 9999999874
No 300
>3clk_A Transcription regulator; 11017J, PSI-II, NYSGXRC, dimer, structural genomics, protein structure initiative; 2.08A {Lactobacillus plantarum WCFS1}
Probab=74.65 E-value=2.9 Score=36.50 Aligned_cols=69 Identities=13% Similarity=0.151 Sum_probs=40.8
Q ss_pred CCchHHHHhcceEEEEe-CCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTV-RDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV-~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+... ....+.. .....+..+..++++-||+.+-+.+ ...++.+++.++..|+++..
T Consensus 28 ~gi~~~a~~~g~~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 97 (290)
T 3clk_A 28 DGIQEEAHKNGYNLIIVYSGSADPE--EQKHALLTAIERPVMGILLLSIALT-DDNLQLLQSSDVPYCFLSMG 97 (290)
T ss_dssp HHHHHHHHTTTCEEEEEC------------CHHHHHHSSCCSEEEEESCC-----CHHHHHCC--CEEEESCC
T ss_pred HHHHHHHHHcCCeEEEEeCCCCCHH--HHHHHHHHHHhcCCCEEEEecccCC-HHHHHHHHhCCCCEEEEcCC
Confidence 46677888889888776 3322221 1123455567899999999875533 35677788899999999864
No 301
>1dbq_A Purine repressor; transcription regulation, DNA-binding regulatory protein; 2.20A {Escherichia coli} SCOP: c.93.1.1 PDB: 1jhz_A
Probab=74.26 E-value=11 Score=32.51 Aligned_cols=69 Identities=9% Similarity=0.064 Sum_probs=44.8
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHH-cCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARD-ANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~-~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....++.+++.+++-|++.+-+.. ..++....+ .++..|+++..
T Consensus 27 ~gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgii~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 96 (289)
T 1dbq_A 27 EAVEKNCFQKGYTLILGNAWNNLE--KQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 96 (289)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEEECSCCC-HHHHHHHHHTTTSCEEEEECS
T ss_pred HHHHHHHHHcCCeEEEEcCCCChH--HHHHHHHHHHhCCCCEEEEEeccCC-HHHHHHHHhccCCCEEEEccC
Confidence 356677788888887764433322 2334456667899999999875542 234444444 79999999764
No 302
>3o1i_D Periplasmic protein TORT; ligand free, two component sensor, periplasmic binding prote signaling protein; HET: PE4; 2.80A {Vibrio parahaemolyticus} PDB: 3o1h_B* 3o1j_C
Probab=74.10 E-value=2.9 Score=36.33 Aligned_cols=69 Identities=17% Similarity=0.255 Sum_probs=49.5
Q ss_pred CCchHHHHhcceEEEEeCCCc--hhHHHHHHHHHHHhhhCCcceEEEEeCCcc-hHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKP--QAADWALKRQMQHSMSSGVDWMFLVSDDND-FKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKP--qAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+....... +.. .-.+.++.++.++++-||+.+-+.+ +...++.+. +|+..|+++..
T Consensus 25 ~g~~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~vdgiii~~~~~~~~~~~~~~~~-~~iPvV~~~~~ 96 (304)
T 3o1i_D 25 YGMVSEAEKQGVNLRVLEAGGYPNKS--RQEQQLALCTQWGANAIILGTVDPHAYEHNLKSWV-GNTPVFATVNQ 96 (304)
T ss_dssp HHHHHHHHHHTCEEEEEECSSTTCHH--HHHHHHHHHHHHTCSEEEECCSSTTSSTTTHHHHT-TTSCEEECSSC
T ss_pred HHHHHHHHHcCCeEEEEcCCCCCCHH--HHHHHHHHHHHcCCCEEEEeCCChhHHHHHHHHHc-CCCCEEEecCC
Confidence 366778888899988775443 322 2345566677899999998865544 456788888 99999999653
No 303
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=73.82 E-value=2 Score=36.06 Aligned_cols=36 Identities=11% Similarity=0.205 Sum_probs=28.3
Q ss_pred CCCCCeecccCCCCCCChHHHHHHHHHhhhhhHHHH
Q 014830 152 VPNDPYICGVCGRKCKTNLDLKKHFKQLHERERQKK 187 (417)
Q Consensus 152 ~p~~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KR 187 (417)
.++..|.|.+|...|.+...|..|++.---..+.++
T Consensus 89 ~~~~~~~C~~C~~~f~s~~~~~~H~~gk~H~~~~~~ 124 (127)
T 1zu1_A 89 GEDRSKCCPVCNMTFSSPVVAESHYIGKTHIKNLRL 124 (127)
T ss_dssp CCCTTTEETTTTEECSSHHHHHHHHTSHHHHHHHHH
T ss_pred CCCCCeEcCCCCCEeCCHHHHHHHHCCHHHHHHHHH
Confidence 456789999999999999999999986443444333
No 304
>3lkb_A Probable branched-chain amino acid ABC transporter, amino acid binding protein; branched amino acid, PSI-II, NYSGXRC, structural genomics; 2.40A {Thermus thermophilus}
Probab=73.31 E-value=1.9 Score=39.21 Aligned_cols=67 Identities=15% Similarity=0.220 Sum_probs=45.4
Q ss_pred chHHHHhcceEEEEeCCCc-hhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 229 LGSELRRAGVFVKTVRDKP-QAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKP-qAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
+...|+++|+.|.....-+ ...| ....+..+...+++.|++.+.+.+...+++.++++|++.-++|.
T Consensus 163 ~~~~l~~~G~~v~~~~~~~~~~~d--~~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 230 (392)
T 3lkb_A 163 ARKAARELGLQIVDVQEVGSGNLD--NTALLKRFEQAGVEYVVHQNVAGPVANILKDAKRLGLKMRHLGA 230 (392)
T ss_dssp HHHHHHHHTCEEEEEEECCTTCCC--CHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHcCCeEEEEEeeCCCCcC--HHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCceEEEe
Confidence 4456667777654321111 1111 22334445668999999999999999999999999999888776
No 305
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.10 E-value=2.3 Score=33.93 Aligned_cols=32 Identities=34% Similarity=0.631 Sum_probs=25.5
Q ss_pred CCeecccCCCCCC-------ChHHHHHHHHHhhhhhHHH
Q 014830 155 DPYICGVCGRKCK-------TNLDLKKHFKQLHERERQK 186 (417)
Q Consensus 155 ~PY~C~VCGRkf~-------T~~kL~kHFKQLHERER~K 186 (417)
.-=+|..||+.+. .=..|.+|++..|..|=.|
T Consensus 27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREELEK 65 (76)
T ss_dssp SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence 3469999999987 1348999999999988443
No 306
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=72.83 E-value=1.7 Score=39.03 Aligned_cols=68 Identities=18% Similarity=0.183 Sum_probs=46.6
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
++...|+++|+.|....-.+...| ....+..+...+++.|++.+.+.+...+++.+++.|++..++|.
T Consensus 169 ~~~~~~~~~G~~v~~~~~~~~~~d--~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 236 (366)
T 3td9_A 169 FFINKFTELGGQVKRVFFRSGDQD--FSAQLSVAMSFNPDAIYITGYYPEIALISRQARQLGFTGYILAG 236 (366)
T ss_dssp HHHHHHHHTTCEEEEEEECTTCCC--CHHHHHHHHHTCCSEEEECSCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHHCCCEEEEEEeCCCCcc--HHHHHHHHHhcCCCEEEEccchhHHHHHHHHHHHcCCCceEEee
Confidence 345566777776653321111111 22344555678999999989999999999999999999877775
No 307
>2hsg_A Glucose-resistance amylase regulator; CCPA, transcriptional regulator, transcription regulator; 2.50A {Bacillus megaterium} SCOP: a.35.1.5 c.93.1.1 PDB: 1rzr_G 2jcg_A 1zvv_A 3oqo_A* 3oqm_A* 3oqn_A*
Probab=72.44 E-value=6.8 Score=35.06 Aligned_cols=69 Identities=9% Similarity=0.102 Sum_probs=47.9
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....+..++.++++-|++.+-+.+ ...++.+++.++..|+++..
T Consensus 80 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~iPvV~~~~~ 148 (332)
T 2hsg_A 80 RGIEDIATMYKYNIILSNSDQNQD--KELHLLNNMLGKQVDGIIFMSGNVT-EEHVEELKKSPVPVVLAASI 148 (332)
T ss_dssp HHHHHHHHHHTCEEEEEECCSHHH--HHHHHHHHTSCCSSCCEEECCSSCC-HHHHHHHTTSSSCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEEeCCCChH--HHHHHHHHHHhCCCcEEEEecCCCC-HHHHHHHHhCCCCEEEEccc
Confidence 366777888898887764333322 1234455667899999999875443 26778888899999999763
No 308
>3eaf_A ABC transporter, substrate binding protein; PSI2, NYSGXRC, substrate binding P structural genomics, protein structure initiative; 2.00A {Aeropyrum pernix}
Probab=72.23 E-value=3 Score=38.22 Aligned_cols=67 Identities=10% Similarity=0.117 Sum_probs=45.7
Q ss_pred chHHHHhcceEEEEeCC-CchhHHHHHHHHHHH--hhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 229 LGSELRRAGVFVKTVRD-KPQAADWALKRQMQH--SMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~d-KPqAAD~ALkrhm~~--~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
+...|+++|+.|..... .+...| ....+.. +...+++.|++.++..+...+++.++++|++.-++|.
T Consensus 162 ~~~~l~~~G~~v~~~~~~~~~~~d--~~~~~~~~~l~~~~~dav~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 231 (391)
T 3eaf_A 162 IKKAAPSLGLQVVGDYDLPLRATE--ADAERIAREMLAADPDYVWCGNTISSCSLLGRAMAKVGLDAFLLTN 231 (391)
T ss_dssp HHHHTGGGTEEEEEEEECCTTCCH--HHHHHHHHHHHTTCCSEEEECSCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHHHcCCceeeeeccCCCCcC--HHHHHHHHHHHHcCCCEEEEecCcHHHHHHHHHHHHCCCCceEEEe
Confidence 34556677776542211 122222 2334444 5678999999999989999999999999998877775
No 309
>1usg_A Leucine-specific binding protein; leucine-binding protein, X-RAY crystallography, protein structure, ABC transport systems, transport protein; 1.53A {Escherichia coli} SCOP: c.93.1.1 PDB: 1usi_A* 1usk_A 2lbp_A 1z15_A 1z16_A 1z17_A 1z18_A 2liv_A
Probab=71.27 E-value=3.4 Score=36.45 Aligned_cols=41 Identities=22% Similarity=0.377 Sum_probs=33.4
Q ss_pred HHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 257 QMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 257 hm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
.+..+...+++.|++.+++.+-..+++.+++.|++.-++|.
T Consensus 185 ~~~~l~~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (346)
T 1usg_A 185 LIARLKKENIDFVYYGGYYPEMGQMLRQARSVGLKTQFMGP 225 (346)
T ss_dssp HHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHhcCCCEEEEcCcchHHHHHHHHHHHcCCCCeEEec
Confidence 44445567899999998888999999999999998767764
No 310
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=71.10 E-value=5.6 Score=34.68 Aligned_cols=67 Identities=6% Similarity=0.079 Sum_probs=49.4
Q ss_pred hHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 230 GSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
...|+++|+.+-.+.--.......+++.++.+-..|+..|++.+....|..+.+.|++.|++ +.+=.
T Consensus 69 ~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~~~~~~~~~l~~~a~~~gv~-l~~En 135 (262)
T 3p6l_A 69 KELAASKGIKIVGTGVYVAEKSSDWEKMFKFAKAMDLEFITCEPALSDWDLVEKLSKQYNIK-ISVHN 135 (262)
T ss_dssp HHHHHHTTCEEEEEEEECCSSTTHHHHHHHHHHHTTCSEEEECCCGGGHHHHHHHHHHHTCE-EEEEC
T ss_pred HHHHHHcCCeEEEEeccCCccHHHHHHHHHHHHHcCCCEEEecCCHHHHHHHHHHHHHhCCE-EEEEe
Confidence 45567778777655433333344578888888889999999999888999999999999974 44444
No 311
>3o9x_A Uncharacterized HTH-type transcriptional regulato; HTH-XRE DNA binding motif, transcriptional regulator, bacter antitoxin, Zn binding protein, transcription regulator-DNA; HET: DNA; 2.10A {Escherichia coli} PDB: 3gn5_A* 3gn5_B* 2kz8_A
Probab=71.01 E-value=10 Score=30.62 Aligned_cols=54 Identities=7% Similarity=0.129 Sum_probs=37.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhhhHHHH--------HhhhhccccchhHHHHHHhhc
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHERERQKK--------LNRMKSLKGKKRQKYKERYIS 208 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHERER~KR--------LnrL~S~KGkrR~rl~~~~a~ 208 (417)
.-+.|..||..+.+.+...+-.+.+-+-.++.. |.+++...|-....+.+.+--
T Consensus 35 ~~~~C~~CGE~~~d~e~~~~~~~~~~e~~r~~~~~~~~~~~l~~~R~~~glsq~~la~~~g~ 96 (133)
T 3o9x_A 35 HGLYCVHCEESIMNKEESDAFMAQVKAFRASVNAETVAPEFIVKVRKKLSLTQKEASEIFGG 96 (133)
T ss_dssp EEEEESSSSCEECCHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHTTCCHHHHHHHHCS
T ss_pred ceeECCCCCCEeecHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHcCCCHHHHHHHHCC
Confidence 357999999999998887777666655444443 666666666666666666543
No 312
>3qk7_A Transcriptional regulators; structural genomics, NEW YORK structural genomix research CO NYSGXRC, PSI-2, protein structur initiative; 2.70A {Yersinia pestis}
Probab=70.77 E-value=5.2 Score=35.15 Aligned_cols=68 Identities=18% Similarity=0.230 Sum_probs=47.0
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......... ....+..+..++++-||+++-+.+- ..++.+++.|+..|+++..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~---~~~~~~~l~~~~vdGiIi~~~~~~~-~~~~~l~~~~iPvV~~~~~ 97 (294)
T 3qk7_A 30 SWIGIELGKRGLDLLLIPDEPGEK---YQSLIHLVETRRVDALIVAHTQPED-FRLQYLQKQNFPFLALGRS 97 (294)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCC---CHHHHHHHHHTCCSEEEECSCCSSC-HHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHCCCEEEEEeCCChhh---HHHHHHHHHcCCCCEEEEeCCCCCh-HHHHHHHhCCCCEEEECCC
Confidence 356778888898887654322111 1223334557899999998765433 7888999999999999874
No 313
>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A
Probab=70.38 E-value=3 Score=27.99 Aligned_cols=24 Identities=17% Similarity=0.358 Sum_probs=21.4
Q ss_pred CCeecccCCCCCCChHHHHHHHHH
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQ 178 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQ 178 (417)
.-|.|+||.-.......|+.||..
T Consensus 2 ~k~~CpvCk~q~Pd~kt~~~H~e~ 25 (28)
T 2jvx_A 2 SDFCCPKCQYQAPDMDTLQIHVME 25 (28)
T ss_dssp CCEECTTSSCEESSHHHHHHHHHH
T ss_pred CcccCccccccCcChHHHHHHHHH
Confidence 358999999999999999999963
No 314
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=69.91 E-value=2.6 Score=38.14 Aligned_cols=68 Identities=15% Similarity=0.147 Sum_probs=45.6
Q ss_pred chHHHHhcceEEEEeCCCc-hhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE--EEEcCC
Q 014830 229 LGSELRRAGVFVKTVRDKP-QAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT--VVVGDS 298 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKP-qAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T--VVVGd~ 298 (417)
+...|+++|..|....--| ...| ....+..+...+++.|++.++..+...+++.+++.|+.. +++|..
T Consensus 160 ~~~~~~~~G~~v~~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~g~~ 230 (375)
T 3i09_A 160 TADVVKANGGKVLGEVRHPLSASD--FSSFLLQAQSSKAQILGLANAGGDTVNAIKAAKEFGITKTMKLAALL 230 (375)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCSC--CHHHHHHHHHTCCSEEEEECCHHHHHHHHHHHHHTTGGGTCEEEESS
T ss_pred HHHHHHHcCCEEeeeeeCCCCCcc--HHHHHHHHHhCCCCEEEEecCchhHHHHHHHHHHcCCCcCceEEecc
Confidence 3456677777664211111 1111 223444556789999999999889999999999999987 577763
No 315
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=68.85 E-value=2.8 Score=37.51 Aligned_cols=66 Identities=12% Similarity=0.124 Sum_probs=44.1
Q ss_pred CchHHHHhcceEEE---EeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 228 GLGSELRRAGVFVK---TVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 228 GLA~ELkRAGV~Vr---tV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
|+...|+++|+.|. .+.... .| ....+..+...+++.|++.++..+...+++.++++|++.-++|.
T Consensus 178 ~~~~~l~~~g~~v~~~~~~~~~~--~d--~~~~~~~~~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 246 (386)
T 3sg0_A 178 VLAAAAPKLGFELTTHEVYARSD--AS--VTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAIYQT 246 (386)
T ss_dssp HHHHHHHHHTCEECCCEEECTTC--SC--CHHHHHHHHHTCCSEEEEECCSGGGHHHHHHHHHTTCCSEEECC
T ss_pred HHHHHHHHcCCEEEEEEeeCCCC--Cc--HHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCCcEEec
Confidence 34556666676553 222111 11 12234445568999999999989999999999999998766664
No 316
>3hut_A Putative branched-chain amino acid ABC transporter; extracellular ligand-binding receptor,transport protein; 1.93A {Rhodospirillum rubrum atcc 11170}
Probab=68.79 E-value=1.8 Score=38.63 Aligned_cols=40 Identities=18% Similarity=0.201 Sum_probs=33.2
Q ss_pred HHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 258 MQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 258 m~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
+..+...+++.|++.+|..+...+++.++++|++.-++|.
T Consensus 187 ~~~l~~~~~d~i~~~~~~~~a~~~~~~~~~~g~~~p~~~~ 226 (358)
T 3hut_A 187 IDEIEDEAPQAIYLAMAYEDAAPFLRALRARGSALPVYGS 226 (358)
T ss_dssp HHHHHHHCCSEEEEESCHHHHHHHHHHHHHTTCCCCEEEC
T ss_pred HHHHHhcCCCEEEEccCchHHHHHHHHHHHcCCCCcEEec
Confidence 3344567899999988888999999999999998877775
No 317
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=68.40 E-value=3.2 Score=37.04 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=34.1
Q ss_pred HHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 258 MQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 258 m~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
+..+...+++.|++.+.+.+...+++.++++|++.-++|.
T Consensus 186 ~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~~~~ 225 (356)
T 3ipc_A 186 ISKMKEAGVSIIYWGGLHTEAGLIIRQAADQGLKAKLVSG 225 (356)
T ss_dssp HHHHHHTTCCEEEEESCHHHHHHHHHHHHHHTCCCEEEEC
T ss_pred HHHHHhcCCCEEEEccCchHHHHHHHHHHHCCCCCcEEEe
Confidence 4445668899999999999999999999999999877775
No 318
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=68.31 E-value=3.6 Score=35.64 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=51.8
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQ 304 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R 304 (417)
++..|.+.|..|..+.+. .+ ..+ ..=+++|++|-+ .+-..+++.|+++|+++|.|.+. .+.|.+
T Consensus 65 ~~~~l~~~g~~~~~~~~~-~~----------~~~-~~~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~~~s~La~ 132 (200)
T 1vim_A 65 FAMRLMHLGYTVYVVGET-VT----------PRI-TDQDVLVGISGSGETTSVVNISKKAKDIGSKLVAVTGKRDSSLAK 132 (200)
T ss_dssp HHHHHHHTTCCEEETTST-TC----------CCC-CTTCEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEESCTTSHHHH
T ss_pred HHHHHHhcCCeEEEeCCc-cc----------cCC-CCCCEEEEEeCCCCcHHHHHHHHHHHHCCCeEEEEECCCCChHHH
Confidence 455678899999887552 11 012 234778888865 45667888999999999999996 468999
Q ss_pred ccccccc
Q 014830 305 HADLWVP 311 (417)
Q Consensus 305 ~ADl~fS 311 (417)
.||..+.
T Consensus 133 ~ad~~l~ 139 (200)
T 1vim_A 133 MADVVMV 139 (200)
T ss_dssp HCSEEEE
T ss_pred hCCEEEE
Confidence 9998874
No 319
>3fxa_A SIS domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.60A {Listeria monocytogenes str}
Probab=68.00 E-value=2.6 Score=36.10 Aligned_cols=95 Identities=12% Similarity=0.204 Sum_probs=60.1
Q ss_pred hHHHHHHHhhcCCC-----CCCC--------chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-
Q 014830 211 DKYNEAARSLLKPK-----VGYG--------LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN- 276 (417)
Q Consensus 211 ~KY~~AArevL~PK-----vGYG--------LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs- 276 (417)
...++++..+...+ .|.| ++..|.+.|..+..+.+ .+. +.. ....+.. =+++|++|-+-
T Consensus 32 ~~i~~~~~~i~~a~~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~----~~~-~~~-~~~~~~~-~dvvI~iS~sG~ 104 (201)
T 3fxa_A 32 EALVKTVEKIAECTGKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTP----SDA-VHG-TLGVLQK-EDILILISKGGN 104 (201)
T ss_dssp HHHHHHHHHHHHCSSCEEEECCTHHHHHHHHHHHHHHHTTCCEEECCH----HHH-TTT-GGGGCCT-TCEEEEECSSSC
T ss_pred HHHHHHHHHHHhcCCcEEEEEecHHHHHHHHHHHHHHhcCCcEEEeCc----hHH-Hhh-hhhcCCC-CCEEEEEeCCCC
Confidence 44555555555443 2433 34467888999988742 110 000 0011223 37778888654
Q ss_pred --chHHHHHHHHHcCCcEEEEcCC-CCccccccccccch
Q 014830 277 --DFKEMLRKARDANLGTVVVGDS-NRGLGQHADLWVPW 312 (417)
Q Consensus 277 --dF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ADl~fSW 312 (417)
+...+++.|+++|+++|.|.+. .+.|.+.||..+.-
T Consensus 105 t~~~~~~~~~ak~~g~~vi~IT~~~~s~l~~~ad~~l~~ 143 (201)
T 3fxa_A 105 TGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPV 143 (201)
T ss_dssp CHHHHTTHHHHHHHTCEEEEEESCTTSHHHHHCSEEEEC
T ss_pred CHHHHHHHHHHHHcCCeEEEEECCCCChhHHhCCEEEEc
Confidence 4566778999999999999986 46899999988753
No 320
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=67.32 E-value=2.6 Score=33.30 Aligned_cols=32 Identities=19% Similarity=0.370 Sum_probs=26.6
Q ss_pred CCeecccCCCCCC---ChHHHHHHHHHhhhhhHHH
Q 014830 155 DPYICGVCGRKCK---TNLDLKKHFKQLHERERQK 186 (417)
Q Consensus 155 ~PY~C~VCGRkf~---T~~kL~kHFKQLHERER~K 186 (417)
.--.|..|++.+. +-..|.+|++..|..|=.+
T Consensus 28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~e~~~ 62 (73)
T 2ct5_A 28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPEEFCE 62 (73)
T ss_dssp SCCEETTTTEECCCCSSTHHHHHHHHHSCHHHHHH
T ss_pred CEEECCCCCccccCCCChHhHHHHHHHHCHHHHHH
Confidence 4678999999855 4578999999999888665
No 321
>3gv0_A Transcriptional regulator, LACI family; transcription regulator, PSI-II, structural genomics structure initiative; 2.35A {Agrobacterium tumefaciens str}
Probab=67.15 E-value=11 Score=32.88 Aligned_cols=68 Identities=12% Similarity=0.134 Sum_probs=46.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHH-hhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQH-SMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~-~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+........... ...+.. +.+++++-||+++-+.. .+.++.+++.++..|+++..
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~~---~~~~~~~l~~~~vdgiIi~~~~~~-~~~~~~l~~~~iPvV~i~~~ 98 (288)
T 3gv0_A 30 FGITEVLSTTQYHLVVTPHIHAKDS---MVPIRYILETGSADGVIISKIEPN-DPRVRFMTERNMPFVTHGRS 98 (288)
T ss_dssp HHHHHHHTTSSCEEEECCBSSGGGT---THHHHHHHHHTCCSEEEEESCCTT-CHHHHHHHHTTCCEEEESCC
T ss_pred HHHHHHHHHcCCEEEEecCCcchhH---HHHHHHHHHcCCccEEEEecCCCC-cHHHHHHhhCCCCEEEECCc
Confidence 3677888999999887643332221 112222 34689999998864432 36788899999999999874
No 322
>2e4u_A Metabotropic glutamate receptor 3; G-protein-coupled receptor, neuron, central nerve system, SI protein; HET: NAG GLU; 2.35A {Rattus norvegicus} PDB: 2e4v_A* 2e4w_A* 2e4x_A* 2e4y_A*
Probab=67.08 E-value=7.8 Score=38.13 Aligned_cols=66 Identities=14% Similarity=0.178 Sum_probs=48.2
Q ss_pred hHHHHhcceEEE---EeCCCchhHHHHHHHHHHHhhh-CCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 230 GSELRRAGVFVK---TVRDKPQAADWALKRQMQHSMS-SGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 230 A~ELkRAGV~Vr---tV~dKPqAAD~ALkrhm~~~m~-rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
..+|++.|+-|- .++..+...| +...+..++. .+++.||+.++..+...+++.|++.|++.+.||.
T Consensus 207 ~~~~~~~gi~v~~~~~~~~~~~~~~--~~~~l~~i~~~s~a~vIi~~~~~~~~~~~~~~~~~~g~~~~~i~s 276 (555)
T 2e4u_A 207 EQEARLRNICIATAEKVGRSNIRKS--YDSVIRELLQKPNARVVVLFMRSDDSRELIAAANRVNASFTWVAS 276 (555)
T ss_dssp HHHHHTTTCEEEEEEEECTTCCHHH--HHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHCCccEEEEEEeCCCCChHH--HHHHHHHHhccCCCCEEEEEcCHHHHHHHHHHHHHhcCCeEEEEe
Confidence 457778888764 3432223443 5556666654 6899999999999999999999999997777765
No 323
>3saj_A Glutamate receptor 1; rossman fold, ION channel, membrane, transport protein; HET: NAG BMA MAN; 2.50A {Rattus norvegicus}
Probab=65.95 E-value=8.9 Score=35.27 Aligned_cols=66 Identities=6% Similarity=0.047 Sum_probs=48.3
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE----EEEcC
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT----VVVGD 297 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T----VVVGd 297 (417)
.+|++.|+.|-... .+...+.-....+..+...+++.|++.+...+...+++.|++.|+.. .++++
T Consensus 149 ~~~~~~g~~v~~~~-~~~~~~~d~~~~l~~ik~~~~~vii~~~~~~~~~~~~~qa~~~g~~~~~~~~i~~~ 218 (384)
T 3saj_A 149 DTAAEKNWQVTAVN-ILTTTEEGYRMLFQDLEKKKERLVVVDCESERLNAILGQIVKLEKNGIGYHYILAN 218 (384)
T ss_dssp HHHHHHTCEEEEEE-GGGCCHHHHHHTTTTCCSCSEEEEEEECCGGGHHHHHHHHHHTCCTTCEEEEEESS
T ss_pred HHhhhcCceEEEEE-eccCCchhHHHHHHHHhccCCcEEEEEcCHHHHHHHHHHHHHcCCCCCCcEEEEEC
Confidence 45677888776543 22222333666666777789999999999999999999999999863 35554
No 324
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=65.94 E-value=12 Score=28.06 Aligned_cols=70 Identities=10% Similarity=0.021 Sum_probs=46.5
Q ss_pred CCchHHHHhcc-eEEEEeCCCchhHHHHHH-------------HHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE
Q 014830 227 YGLGSELRRAG-VFVKTVRDKPQAADWALK-------------RQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT 292 (417)
Q Consensus 227 YGLA~ELkRAG-V~VrtV~dKPqAAD~ALk-------------rhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T 292 (417)
..++..|.+.| ..|..+...|+.++.+.. ..+...+ .+++.+|..........+++.|.+.|++.
T Consensus 18 ~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~-~~~d~vi~~~~~~~~~~~~~~~~~~g~~~ 96 (118)
T 3ic5_A 18 QMIAALLKTSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKAL-GGFDAVISAAPFFLTPIIAKAAKAAGAHY 96 (118)
T ss_dssp HHHHHHHHHCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHHT-TTCSEEEECSCGGGHHHHHHHHHHTTCEE
T ss_pred HHHHHHHHhCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHHH-cCCCEEEECCCchhhHHHHHHHHHhCCCE
Confidence 45678888889 778777655655443321 1122222 47888877776667788888888998887
Q ss_pred EEEcC
Q 014830 293 VVVGD 297 (417)
Q Consensus 293 VVVGd 297 (417)
+.++.
T Consensus 97 ~~~~~ 101 (118)
T 3ic5_A 97 FDLTE 101 (118)
T ss_dssp ECCCS
T ss_pred EEecC
Confidence 76654
No 325
>4evq_A Putative ABC transporter subunit, substrate-bindi component; structural genomics, PSI-biology, midwest center for structu genomics; HET: MSE PHB; 1.40A {Rhodopseudomonas palustris} PDB: 4evr_A
Probab=65.22 E-value=4.3 Score=36.35 Aligned_cols=66 Identities=15% Similarity=0.174 Sum_probs=43.8
Q ss_pred CchHHHHhcceEEE---EeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 228 GLGSELRRAGVFVK---TVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 228 GLA~ELkRAGV~Vr---tV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
|+...|+++|..|. .++... .| ....+..+...+++.|++.+.+.+-..+++.++++|++.-++|.
T Consensus 170 ~~~~~l~~~G~~v~~~~~~~~~~--~d--~~~~~~~l~~~~~dai~~~~~~~~a~~~~~~~~~~g~~vp~~~~ 238 (375)
T 4evq_A 170 GFKKSFTAGKGEVVKDITIAFPD--VE--FQSALAEIASLKPDCVYAFFSGGGALKFIKDYAAANLGIPLWGP 238 (375)
T ss_dssp HHHHHHHHTTCEEEEEEEECTTC--CC--CHHHHHHHHHHCCSEEEEECCTHHHHHHHHHHHHTTCCCCEEEE
T ss_pred HHHHHHHHcCCeEEEEEecCCCC--cc--HHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCceEEec
Confidence 34456677777553 222111 11 12233344556899999988889999999999999999777775
No 326
>2qip_A Protein of unknown function VPA0982; APC85975, vibrio parahaemolyticus RIMD 2210633, STR genomics, PSI-2, protein structure initiative; 1.48A {Vibrio parahaemolyticus}
Probab=64.72 E-value=3 Score=35.67 Aligned_cols=42 Identities=29% Similarity=0.254 Sum_probs=31.9
Q ss_pred CeEEEEeeCCCCCCC-----C--CchHHHHHHHHHHHHcCceeeeecccccC
Q 014830 79 NKVVVLWDLDNKPPR-----G--PPYDAAMSLRRVAERFGEVTDISAYANRH 123 (417)
Q Consensus 79 ~~V~VlWDLDNKPP~-----~--pPY~AA~rLr~~As~FG~Vv~isAYANRh 123 (417)
.+|.||||-+|=+.. + +-| .+|.+.+...|.++...+||+..
T Consensus 10 ~rvavfiD~~Nl~~~~~~~~~~~~d~---~~l~~~~~~~g~l~~~~~Y~~~~ 58 (165)
T 2qip_A 10 EKIAILVDVQNVYYTCREAYRSNFDY---NQFWYVATQEKEVVSAKAYAIAS 58 (165)
T ss_dssp EEEEEEEEHHHHHHHHHHHHSSCBCH---HHHHHHHTTTEEEEEEEEEECCC
T ss_pred CcEEEEEEHHHHHHHHHHHcCCCCCH---HHHHHHHhcCCEEEEEEEEEccC
Confidence 689999999997541 0 112 46778888999999999998754
No 327
>3o21_A Glutamate receptor 3; periplasmatic binding protein, oligomerization, membrane, TR protein; HET: NAG; 2.20A {Rattus norvegicus} PDB: 3p3w_A
Probab=63.74 E-value=10 Score=35.26 Aligned_cols=62 Identities=5% Similarity=-0.055 Sum_probs=44.8
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT 292 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T 292 (417)
.+|++.|+.|....--|...+.-....+..+...+++.||+.+...+...+++.|++.|+..
T Consensus 151 ~~~~~~g~~v~~~~~~~~~~~~d~~~~l~~ik~~~~~vii~~~~~~~~~~i~~qa~~~g~~~ 212 (389)
T 3o21_A 151 EAAVQNNWQVTARSVGNIKDVQEFRRIIEEMDRRQEKRYLIDCEVERINTILEQVVILGKHS 212 (389)
T ss_dssp HHHHHTTCEEEEEECTTCCCTHHHHHHHHHHHTTTCCEEEEESCHHHHHHHHHHHHHHCSCS
T ss_pred HHhhcCCCeEEEEEecCCCCcHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCccc
Confidence 45677787776443222111112556677778889999999999999999999999999864
No 328
>2fqx_A Membrane lipoprotein TMPC; ABC transport system, ligand-binding protein, guanosine, TP0319, transport protein; HET: GMP; 1.70A {Treponema pallidum} PDB: 2fqw_A* 2fqy_A*
Probab=63.67 E-value=20 Score=32.70 Aligned_cols=65 Identities=9% Similarity=0.124 Sum_probs=44.1
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHH-HHHHHHHc-CCcEEEEcC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKE-MLRKARDA-NLGTVVVGD 297 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~-~Lr~AR~~-~v~TVVVGd 297 (417)
|+...++..|+.+..+....+ +|. .+.+..++.+|++-||+++-. +.+ +...+++. ++..|+|+.
T Consensus 28 Gi~~~~~~~g~~~~~~~~~~~-~~~--~~~l~~l~~~~~dgIi~~~~~--~~~~~~~~a~~~p~~p~v~id~ 94 (318)
T 2fqx_A 28 GISRFAQENNAKCKYVTASTD-AEY--VPSLSAFADENMGLVVACGSF--LVEAVIETSARFPKQKFLVIDA 94 (318)
T ss_dssp HHHHHHHHTTCEEEEEECCSG-GGH--HHHHHHHHHTTCSEEEEESTT--THHHHHHHHHHCTTSCEEEESS
T ss_pred HHHHHHHHhCCeEEEEeCCCH-HHH--HHHHHHHHHcCCCEEEECChh--HHHHHHHHHHHCCCCEEEEEcC
Confidence 566778888998887654433 332 356777788999999998733 233 44445553 888888875
No 329
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=63.49 E-value=13 Score=32.78 Aligned_cols=63 Identities=27% Similarity=0.454 Sum_probs=42.2
Q ss_pred HHHhcceEEEEeCCCchhHHHHHHHHHHH-hhhCCcceEEEEe-CCcc-hHHHHHHHHHcCCcEEEEcCC
Q 014830 232 ELRRAGVFVKTVRDKPQAADWALKRQMQH-SMSSGVDWMFLVS-DDND-FKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 232 ELkRAGV~VrtV~dKPqAAD~ALkrhm~~-~m~rgv~cLvLVS-DDsd-F~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|....||-|+||.||.+--. -.+.|+. ... .+.+|+|. ||.. ..+++..|+++|+...||=+.
T Consensus 47 efekqgvdvrtvedkedfre--nireiwerypq--ldvvvivttddkewikdfieeakergvevfvvynn 112 (162)
T 2l82_A 47 EFEKQGVDVRTVEDKEDFRE--NIREIWERYPQ--LDVVVIVTTDDKEWIKDFIEEAKERGVEVFVVYNN 112 (162)
T ss_dssp HHHTTTCEEEECCSHHHHHH--HHHHHHHHCTT--CCEEEEEECCCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred HHHHcCCceeeeccHHHHHH--HHHHHHHhCCC--CcEEEEEecCcHHHHHHHHHHHHhcCcEEEEEecC
Confidence 55678999999999876431 2333332 223 45555554 4444 468899999999999888664
No 330
>3sm9_A Mglur3, metabotropic glutamate receptor 3; structural genomics, structural genomics consortium, SGC, CE membrane, G-protein coupled receptor; HET: Z99; 2.26A {Homo sapiens}
Probab=63.46 E-value=11 Score=36.58 Aligned_cols=67 Identities=16% Similarity=0.167 Sum_probs=46.0
Q ss_pred chHHHHhcceEEEE---eCCCchhHHHHHHHHH-HHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 229 LGSELRRAGVFVKT---VRDKPQAADWALKRQM-QHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~Vrt---V~dKPqAAD~ALkrhm-~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
+..++++.|+-|-. ++..+...| ....+ ..+...+++.||+.++..+...+++.|++.|+..+.||.
T Consensus 205 ~~~~~~~~Gi~v~~~~~i~~~~~~~d--~~~~l~~~i~~s~a~vIi~~~~~~~~~~l~~~~~~~g~~~~wI~s 275 (479)
T 3sm9_A 205 FEQEARLRNISIATAEKVGRSNIRKS--YDSVIRELLQKPNARVVVLFMRSDDSRELIAAASRANASFTWVAS 275 (479)
T ss_dssp HHHHHHTTTCEEEEEEEECC--CHHH--HHHHHHHHHTCTTCCEEEEECCHHHHHHHHHHHHHTTCCCEEEEC
T ss_pred HHHHHHHCCceEEEEEEcCCCCChHH--HHHHHHHHHhcCCCeEEEEEcChHHHHHHHHHHHHhCCEEEEEEe
Confidence 35677788877654 332222222 33344 223457899999999999999999999999997666665
No 331
>3snr_A Extracellular ligand-binding receptor; structural genomics, APC102214, PSI-biology, midwest center structural genomics, MCSG; HET: MSE TYR PHE; 1.49A {Rhodopseudomonas palustris} PDB: 3uk0_A* 3t23_A* 3ukj_A* 4eyo_A* 4eyq_A* 3tx6_A* 4f8j_A* 4fb4_A*
Probab=63.37 E-value=3.5 Score=36.42 Aligned_cols=65 Identities=8% Similarity=0.055 Sum_probs=42.6
Q ss_pred chHHHHhcceEEE---EeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcC
Q 014830 229 LGSELRRAGVFVK---TVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~Vr---tV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
+...|+++|+.|. .+..... | ....+..+...+++.|++.+.+.+...+++.++++|++.-++|.
T Consensus 155 ~~~~l~~~g~~v~~~~~~~~~~~--~--~~~~~~~l~~~~~dav~~~~~~~~a~~~~~~~~~~g~~~p~i~~ 222 (362)
T 3snr_A 155 LKKQGEAMGLKIVGEERFARPDT--S--VAGQALKLVAANPDAILVGASGTAAALPQTTLRERGYNGLIYQT 222 (362)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCS--C--CHHHHHHHHHHCCSEEEEECCHHHHHHHHHHHHHTTCCSEEEEC
T ss_pred HHHHHHHcCCEEEEEeecCCCCC--C--HHHHHHHHHhcCCCEEEEecCcchHHHHHHHHHHcCCCccEEec
Confidence 4456677776643 2222111 1 11223334557899999998899999999999999998655654
No 332
>3ewi_A N-acylneuraminate cytidylyltransferase; beta barrel, HAD-like, rossmannoid fold, nucleotidyltransferase, nucleus; 1.90A {Mus musculus}
Probab=63.18 E-value=8.9 Score=32.91 Aligned_cols=65 Identities=14% Similarity=0.225 Sum_probs=44.4
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCccc
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGLG 303 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L~ 303 (417)
..|++.|+.+-.++.+ ..+...++. ...|++ + .......-..+.+.+++.|+ .+++|||+.-++.
T Consensus 46 ~~Lk~~Gi~~~I~Tg~-~~~~~~l~~-----l~lgi~-~-~~g~~~K~~~l~~~~~~~gi~~~~~~~vGD~~nDi~ 113 (168)
T 3ewi_A 46 SLLKKSGIEVRLISER-ACSKQTLSA-----LKLDCK-T-EVSVSDKLATVDEWRKEMGLCWKEVAYLGNEVSDEE 113 (168)
T ss_dssp HHHHHTTCEEEEECSS-CCCHHHHHT-----TCCCCC-E-ECSCSCHHHHHHHHHHHTTCCGGGEEEECCSGGGHH
T ss_pred HHHHHCCCEEEEEeCc-HHHHHHHHH-----hCCCcE-E-EECCCChHHHHHHHHHHcCcChHHEEEEeCCHhHHH
Confidence 6899999999999999 544444432 245777 3 34444455566667777776 5899999865553
No 333
>3hs3_A Ribose operon repressor; PSI-II, NYSGXRC, periplasmic binding protein, structural genomics, protein structure initiative; 1.60A {Lactobacillus acidophilus}
Probab=63.16 E-value=3.7 Score=35.83 Aligned_cols=88 Identities=9% Similarity=0.053 Sum_probs=58.0
Q ss_pred CCchHHHHhcceE-EEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC-CCcccc
Q 014830 227 YGLGSELRRAGVF-VKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS-NRGLGQ 304 (417)
Q Consensus 227 YGLA~ELkRAGV~-VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R 304 (417)
.|+..++++.|+. +.......+... -...+..+..++++.||+++ ..+..+.+.|+..|+++.. .....
T Consensus 30 ~gi~~~a~~~g~~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiIi~~------~~~~~~~~~~iPvV~~~~~~~~~~~- 100 (277)
T 3hs3_A 30 DGIQEVIQKEGYTALISFSTNSDVKK--YQNAIINFENNNVDGIITSA------FTIPPNFHLNTPLVMYDSANINDDI- 100 (277)
T ss_dssp HHHHHHHHHTTCEEEEEECSSCCHHH--HHHHHHHHHHTTCSEEEEEC------CCCCTTCCCSSCEEEESCCCCCSSS-
T ss_pred HHHHHHHHHCCCCEEEEEeCCCChHH--HHHHHHHHHhCCCCEEEEcc------hHHHHHHhCCCCEEEEcccccCCCC-
Confidence 4677889999999 776654444331 23445566789999999998 3356677889999999875 32211
Q ss_pred ccccccchhhhhcCcccccccc
Q 014830 305 HADLWVPWIEVENGELTERDLV 326 (417)
Q Consensus 305 ~ADl~fSW~eV~~Gk~~~~~~~ 326 (417)
. ++.-+....|+.--+-|.
T Consensus 101 -~--~V~~D~~~~g~~a~~~L~ 119 (277)
T 3hs3_A 101 -V--RIVSNNTKGGKESIKLLS 119 (277)
T ss_dssp -E--EEEECHHHHHHHHHHTSC
T ss_pred -E--EEEEChHHHHHHHHHHHH
Confidence 1 555556666665555565
No 334
>1j5x_A Glucosamine-6-phosphate deaminase; structural genomics, TM0813, glucosamine-6-phosphate deamina PSI, protein structure initiative; 1.80A {Thermotoga maritima} SCOP: c.80.1.1
Probab=62.43 E-value=6.1 Score=37.33 Aligned_cols=76 Identities=13% Similarity=0.071 Sum_probs=51.8
Q ss_pred chHHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCccc
Q 014830 229 LGSELRR-AGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLG 303 (417)
Q Consensus 229 LA~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~ 303 (417)
++..|.+ .|+.|..+.+ .+. .+....+..+-+++|.+|-+ .+-..+++.|+++|.++|.|.+. ++.|.
T Consensus 70 ~~~~l~~~~g~~v~~~~~----~~~---~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~vIaIT~~~~S~La 142 (342)
T 1j5x_A 70 ISYYFERVLKIRTKAIPA----GEV---AFQKIPDLEERGLAFLFSRTGNTTEVLLANDVLKKRNHRTIGITIEEESRLA 142 (342)
T ss_dssp HHHHHHHHHCCEEEEEEH----HHH---HTTCSCCCCSSEEEEEECSSSCCHHHHHHHHHHHHTTEEEEEEESCTTSHHH
T ss_pred HHHHHHHhhCCeEEEECc----hHH---HhcCcccCCCCeEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCHHH
Confidence 4566777 8998887742 221 11111122223677888864 56778889999999999999986 47899
Q ss_pred cccccccc
Q 014830 304 QHADLWVP 311 (417)
Q Consensus 304 R~ADl~fS 311 (417)
+.||..+.
T Consensus 143 ~~ad~~l~ 150 (342)
T 1j5x_A 143 KESDLPLV 150 (342)
T ss_dssp HHSSEEEE
T ss_pred HhcCEEEE
Confidence 99997654
No 335
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=61.57 E-value=2.7 Score=37.90 Aligned_cols=41 Identities=17% Similarity=0.253 Sum_probs=34.5
Q ss_pred HHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 258 MQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 258 m~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
+..+...+++.|++.+.+.+...+++.++++|++.-++|..
T Consensus 189 ~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~i~~~ 229 (364)
T 3lop_A 189 VDKLLAADVQAIFLGATAEPAAQFVRQYRARGGEAQLLGLS 229 (364)
T ss_dssp HHHHHHSCCSEEEEESCHHHHHHHHHHHHHTTCCCEEEECT
T ss_pred HHHHHhCCCCEEEEecCcHHHHHHHHHHHHcCCCCeEEEec
Confidence 34455688999999999999999999999999988777753
No 336
>3mmz_A Putative HAD family hydrolase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.84A {Streptomyces avermitilis}
Probab=61.49 E-value=14 Score=30.91 Aligned_cols=74 Identities=12% Similarity=0.084 Sum_probs=47.2
Q ss_pred chHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--
Q 014830 229 LGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL-- 302 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L-- 302 (417)
+-..|+++|+.+-.++.++... ...++ ..|++ +.-...+.-..+.+.+++.|+ .+++|||+..++
T Consensus 47 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~-------~lgi~--~~~~~~~k~~~l~~~~~~~~~~~~~~~~vGD~~nD~~~ 117 (176)
T 3mmz_A 47 GIAALRKSGLTMLILSTEQNPVVAARAR-------KLKIP--VLHGIDRKDLALKQWCEEQGIAPERVLYVGNDVNDLPC 117 (176)
T ss_dssp HHHHHHHTTCEEEEEESSCCHHHHHHHH-------HHTCC--EEESCSCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCeEEEEECcChHHHHHHHH-------HcCCe--eEeCCCChHHHHHHHHHHcCCCHHHEEEEcCCHHHHHH
Confidence 6678999999999999888744 22222 24666 333444444555556666663 589999986544
Q ss_pred ccccccccc
Q 014830 303 GQHADLWVP 311 (417)
Q Consensus 303 ~R~ADl~fS 311 (417)
.+.|++.+-
T Consensus 118 ~~~ag~~v~ 126 (176)
T 3mmz_A 118 FALVGWPVA 126 (176)
T ss_dssp HHHSSEEEE
T ss_pred HHHCCCeEE
Confidence 556665543
No 337
>3kbb_A Phosphorylated carbohydrates phosphatase TM_1254; hydrolase, arbohydrate metabolism, COBA magnesium, manganese, metal-binding, nickel; HET: MSE GOL; 1.74A {Thermotoga maritima MSB8}
Probab=61.48 E-value=27 Score=28.64 Aligned_cols=34 Identities=18% Similarity=0.151 Sum_probs=20.5
Q ss_pred HHHhhcCCCCC-CCchHHHHhcceEEEEeCCCchh
Q 014830 216 AARSLLKPKVG-YGLGSELRRAGVFVKTVRDKPQA 249 (417)
Q Consensus 216 AArevL~PKvG-YGLA~ELkRAGV~VrtV~dKPqA 249 (417)
...+...|.-| ..+-..|+..|+.+-.+++.+..
T Consensus 78 ~~~~~~~~~pg~~~~l~~L~~~g~~~~i~tn~~~~ 112 (216)
T 3kbb_A 78 VFSELLKENPGVREALEFVKSKRIKLALATSTPQR 112 (216)
T ss_dssp HHHHHCCBCTTHHHHHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHhcccCccHHHHHHHHHHcCCCcccccCCcHH
Confidence 33344444444 44556677777777777777763
No 338
>3e8m_A Acylneuraminate cytidylyltransferase; 2-keto-3-deoxynononic acid 9-phosphate phosphohydrolase, nucleotidyltransferase; HET: PEG PG4 EDO PGE; 1.10A {Bacteroides thetaiotaomicron} PDB: 3e84_A 3e81_A*
Probab=61.22 E-value=21 Score=28.64 Aligned_cols=75 Identities=9% Similarity=0.046 Sum_probs=46.4
Q ss_pred chHHHHhcceEEEEeCCCchh-HHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--
Q 014830 229 LGSELRRAGVFVKTVRDKPQA-ADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL-- 302 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqA-AD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L-- 302 (417)
+-..|+++|+.+-.+++.+.. +...+++ .|++..+-.. -+.-..+.+.+++.|+ .+++|||+..++
T Consensus 39 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-------~gl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~ 110 (164)
T 3e8m_A 39 GIFWAHNKGIPVGILTGEKTEIVRRRAEK-------LKVDYLFQGV-VDKLSAAEELCNELGINLEQVAYIGDDLNDAKL 110 (164)
T ss_dssp HHHHHHHTTCCEEEECSSCCHHHHHHHHH-------TTCSEEECSC-SCHHHHHHHHHHHHTCCGGGEEEECCSGGGHHH
T ss_pred HHHHHHHCCCEEEEEeCCChHHHHHHHHH-------cCCCEeeccc-CChHHHHHHHHHHcCCCHHHEEEECCCHHHHHH
Confidence 467899999999999999864 3333332 4555433221 3344445555666665 689999986443
Q ss_pred ccccccccc
Q 014830 303 GQHADLWVP 311 (417)
Q Consensus 303 ~R~ADl~fS 311 (417)
.+.|.+.+-
T Consensus 111 ~~~ag~~~~ 119 (164)
T 3e8m_A 111 LKRVGIAGV 119 (164)
T ss_dssp HTTSSEEEC
T ss_pred HHHCCCeEE
Confidence 556655443
No 339
>2h0a_A TTHA0807, transcriptional regulator; repressor, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=61.16 E-value=3.1 Score=35.69 Aligned_cols=69 Identities=13% Similarity=-0.013 Sum_probs=38.2
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+... ....+..+..++++-||+.+-+.+ ...++.+++.|+..|+++..
T Consensus 19 ~gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~~~~~~iPvV~~~~~ 87 (276)
T 2h0a_A 19 EGIEGVLLEQRYDLALFPILSLARL--KRYLENTTLAYLTDGLILASYDLT-ERFEEGRLPTERPVVLVDAQ 87 (276)
T ss_dssp HHHHHHHGGGTCEEEECCCCSCCCC--C---------CCCSEEEEESCCCC-------CCSCSSCEEEESSC
T ss_pred HHHHHHHHHCCCEEEEEeCCCchhh--HHHHHHHHHhCCCCEEEEecCCCC-HHHHHHHhhcCCCEEEEecc
Confidence 4677788889998877643322210 122344456789999998875543 36777788889999999764
No 340
>3miz_A Putative transcriptional regulator protein, LACI family; LACL family, protein structure initiative II (PSI II), NYSGXRC, structural genomics; 1.91A {Rhizobium etli}
Probab=61.12 E-value=3.5 Score=36.19 Aligned_cols=95 Identities=12% Similarity=0.027 Sum_probs=58.3
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCccccccc
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHAD 307 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~AD 307 (417)
|+..++++.|+.+.......... .....+..+..++++-||+++-+.+- .+..+++.++..|+++.........
T Consensus 35 gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdGiIi~~~~~~~--~~~~~~~~~iPvV~~~~~~~~~~~~-- 108 (301)
T 3miz_A 35 GIQDWANANGKTILIANTGGSSE--REVEIWKMFQSHRIDGVLYVTMYRRI--VDPESGDVSIPTVMINCRPQTRELL-- 108 (301)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEEEEEEEEE--CCCCCTTCCCCEEEEEEECSSTTSS--
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEEEecCCccH--HHHHHHhCCCCEEEECCCCCCCCCC--
Confidence 47788999999998765433322 12344555678999999988755432 6777888999999998633211111
Q ss_pred cccchhhhhcCcccccccccC
Q 014830 308 LWVPWIEVENGELTERDLVPR 328 (417)
Q Consensus 308 l~fSW~eV~~Gk~~~~~~~~~ 328 (417)
-++.-+....|+.--+-|..+
T Consensus 109 ~~V~~D~~~~g~~a~~~L~~~ 129 (301)
T 3miz_A 109 PSIEPDDYQGARDLTRYLLER 129 (301)
T ss_dssp CEEEECHHHHHHHHHHHHHTT
T ss_pred CEEeeChHHHHHHHHHHHHHc
Confidence 233334444554443444443
No 341
>3cvj_A Putative phosphoheptose isomerase; rossman fold, 3-layer (ABA) sandwich, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.00A {Bacillus halodurans c-125}
Probab=60.50 E-value=4.8 Score=35.67 Aligned_cols=46 Identities=17% Similarity=0.200 Sum_probs=36.6
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCCC-C-----------ccccccccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDSN-R-----------GLGQHADLWVP 311 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~~-~-----------~L~R~ADl~fS 311 (417)
=|++|++|-+ .+-..+++.||++|++||.|.+.. . .|.+.||+.+.
T Consensus 109 ~Dv~I~iS~SG~t~~~i~~~~~Ak~~G~~vI~IT~~~~s~~~~~~~~~g~~La~~aD~~l~ 169 (243)
T 3cvj_A 109 KDVIMIISNSGRNTVPVEMAIESRNIGAKVIAMTSMKHSQKVTSRHKSGKKLYEYADVVLD 169 (243)
T ss_dssp TCEEEEECSSCCSHHHHHHHHHHHHHTCEEEEEECHHHHHHSCCCSTTSCCGGGGCSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCCcccccccccCCCcCcHHHhCCEEEE
Confidence 4778888864 567788899999999999998852 2 78999998774
No 342
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=60.08 E-value=3.7 Score=37.29 Aligned_cols=67 Identities=19% Similarity=0.258 Sum_probs=43.8
Q ss_pred chHHHHhcceEEEEeCCCc-hhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE---EEEcC
Q 014830 229 LGSELRRAGVFVKTVRDKP-QAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT---VVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKP-qAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T---VVVGd 297 (417)
+...|+++|..|....--| ...| ....+..+...+++.|++.++..+...+++.+++.|+.. ++.|+
T Consensus 162 ~~~~~~~~G~~v~~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 232 (379)
T 3n0w_A 162 IRRELTAGGGQIVGSVRFPFETQD--FSSYLLQAKASGAQLIVSTSGGAANINIMKQAREFGLPSKTQKVGGM 232 (379)
T ss_dssp HHHHHHHHTCEEEEEEEECTTCCC--CHHHHHHHHHHTCSEEEECCCHHHHHHHHHHHHHTTCSCSSCEEECC
T ss_pred HHHHHHHcCCEEEEEEeCCCCCCC--HHHHHHHHHHCCCCEEEEecccchHHHHHHHHHHcCCCCCCcEEEec
Confidence 3456777777654221111 1111 223444456678999999888889999999999999976 45555
No 343
>2hqb_A Transcriptional activator of COMK gene; berkeley structure genomics center target 1957B, structural genomics, PSI; 2.70A {Bacillus halodurans}
Probab=60.02 E-value=14 Score=33.21 Aligned_cols=66 Identities=17% Similarity=0.154 Sum_probs=43.8
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHH-HHHHHHc-CCcEEEEcC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEM-LRKARDA-NLGTVVVGD 297 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~-Lr~AR~~-~v~TVVVGd 297 (417)
|+...++..|+.+..+...+..++ ..+.+..++.+|++-||+++- .+.+. .+.+++. ++..|+++.
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~~--~~~~l~~l~~~~vdgIi~~~~--~~~~~~~~~~~~~p~~p~v~id~ 95 (296)
T 2hqb_A 28 GLLNIHSNLDVDVVLEEGVNSEQK--AHRRIKELVDGGVNLIFGHGH--AFAEYFSTIHNQYPDVHFVSFNG 95 (296)
T ss_dssp HHHHHHHHSCCEEEEECCCCSHHH--HHHHHHHHHHTTCCEEEECST--HHHHHHHTTTTSCTTSEEEEESC
T ss_pred HHHHHHHHhCCeEEEEeCCCCHHH--HHHHHHHHHHCCCCEEEEcCH--hHHHHHHHHHHHCCCCEEEEEec
Confidence 667788888999987765554343 235677778899999998863 33333 3334332 777788865
No 344
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=59.64 E-value=5.3 Score=35.67 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=42.0
Q ss_pred chHHHHhcceEEEE---eCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc---EEEEcC
Q 014830 229 LGSELRRAGVFVKT---VRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG---TVVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~Vrt---V~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~---TVVVGd 297 (417)
+...|+++|..|.. ++... .| ....+..+...+++.|++.+.+.+...+++.+++.|++ ..++|.
T Consensus 159 ~~~~l~~~g~~v~~~~~~~~~~--~d--~~~~~~~l~~~~~d~v~~~~~~~~a~~~~~~~~~~g~~~~~v~~~~~ 229 (368)
T 4eyg_A 159 FKERFTAGGGEIVEEIKVPLAN--PD--FAPFLQRMKDAKPDAMFVFVPAGQGGNFMKQFAERGLDKSGIKVIGP 229 (368)
T ss_dssp HHHHHHHTTCEEEEEEEECSSS--CC--CHHHHHHHHHHCCSEEEEECCTTCHHHHHHHHHHTTGGGTTCEEEEE
T ss_pred HHHHHHHcCCEEEEEEeCCCCC--Cc--HHHHHHHHHhcCCCEEEEeccchHHHHHHHHHHHcCCCcCCceEEec
Confidence 34456667765432 22111 11 12234445567899999978888999999999999998 445554
No 345
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=59.20 E-value=15 Score=30.71 Aligned_cols=39 Identities=10% Similarity=0.145 Sum_probs=24.2
Q ss_pred HHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 258 MQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 258 m~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
++.+...|+..+++.+.. .=..+.+.|+++|++ +||..+
T Consensus 86 ~~~~~~~g~~~i~~~~~~-~~~~l~~~a~~~Gi~--~igpnc 124 (138)
T 1y81_A 86 AKEAVEAGFKKLWFQPGA-ESEEIRRFLEKAGVE--YSFGRC 124 (138)
T ss_dssp HHHHHHTTCCEEEECTTS-CCHHHHHHHHHHTCE--EECSCC
T ss_pred HHHHHHcCCCEEEEcCcc-HHHHHHHHHHHCCCE--EEcCCc
Confidence 334556777776665533 235677777888776 667654
No 346
>1dp4_A Atrial natriuretic peptide receptor A; periplasmic binding protein fold, dimer, hormone/growth FACT receptor, lyase complex; HET: NAG; 2.00A {Rattus norvegicus} SCOP: c.93.1.1 PDB: 1t34_A* 3a3k_A*
Probab=58.49 E-value=11 Score=34.88 Aligned_cols=60 Identities=12% Similarity=0.143 Sum_probs=41.4
Q ss_pred hHHHHh-cceEEEEeCCC-chhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE
Q 014830 230 GSELRR-AGVFVKTVRDK-PQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT 292 (417)
Q Consensus 230 A~ELkR-AGV~VrtV~dK-PqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T 292 (417)
..+|++ .|+.|....-. +...| +...+..+.. +++.||+.+...+...+++.|++.|+..
T Consensus 172 ~~~~~~~~g~~v~~~~~~~~~~~d--~~~~l~~i~~-~~~viv~~~~~~~~~~~~~~a~~~g~~~ 233 (435)
T 1dp4_A 172 YMRVRERLNITVNHQEFVEGDPDH--YPKLLRAVRR-KGRVIYICSSPDAFRNLMLLALNAGLTG 233 (435)
T ss_dssp HHHHHHHHCCEEEEEEECTTCGGG--HHHHHHHHHH-HCSEEEEESCHHHHHHHHHHHHHTTCCT
T ss_pred HHHHHhhcCeEEEEEEEecCchhh--HHHHHHHHHh-hCceEEEecChHHHHHHHHHHHHcCCCC
Confidence 456666 78766533211 22333 4445555556 8999999999999999999999999863
No 347
>2wm8_A MDP-1, magnesium-dependent phosphatase 1; haloacid dehalogenase, protein phosphatase, hydrolase, magne metal-binding; 1.75A {Homo sapiens} PDB: 1u7o_A 1u7p_A
Probab=58.48 E-value=36 Score=28.14 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=10.1
Q ss_pred HHHHhcceEEEEeCCCc
Q 014830 231 SELRRAGVFVKTVRDKP 247 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKP 247 (417)
..|++.|+.+-.+++.+
T Consensus 78 ~~L~~~G~~v~ivT~~~ 94 (187)
T 2wm8_A 78 KRLQSLGVPGAAASRTS 94 (187)
T ss_dssp HHHHHHTCCEEEEECCS
T ss_pred HHHHHCCceEEEEeCCC
Confidence 34555666666666655
No 348
>1qpz_A PURA, protein (purine nucleotide synthesis repressor); transcription regulation, DNA-binding, purine biosynthesis; HET: DNA HPA; 2.50A {Escherichia coli} SCOP: a.35.1.5 c.93.1.1 PDB: 1bdi_A* 1qp0_A* 1qp4_A* 1pnr_A* 1wet_A* 1zay_A* 1vpw_A* 2pue_A* 2puf_A* 2pug_A* 1bdh_A* 1qp7_A* 1qqa_A* 1qqb_A* 2puc_A* 2pua_A* 2pub_A* 2pud_A* 1jfs_A* 1jh9_A* ...
Probab=58.03 E-value=26 Score=31.47 Aligned_cols=69 Identities=9% Similarity=0.064 Sum_probs=44.1
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHH-cCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARD-ANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~-~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+.. .....+..++.++++-|++.+.+.. ..++....+ .++..|+++..
T Consensus 78 ~gi~~~a~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~-~~~~~~l~~~~~iPvV~~~~~ 147 (340)
T 1qpz_A 78 EAVEKNCFQKGYTLILGNAWNNLE--KQRAYLSMMAQKRVDGLLVMCSEYP-EPLLAMLEEYRHIPMVVMDWG 147 (340)
T ss_dssp HHHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEEECCSCCC-HHHHHHHHTTTTSCEEEEEES
T ss_pred HHHHHHHHHcCCEEEEEeCCCCHH--HHHHHHHHHHcCCCCEEEEeCCCCC-hHHHHHHHhhCCCCEEEEecc
Confidence 366778888898887654333322 2234566667899999999865432 123343333 68999999763
No 349
>3g68_A Putative phosphosugar isomerase; SIS domain, double-SIS DOMA protein, structural genomics, joint center for structural G JCSG; HET: MSE CIT; 1.80A {Clostridium difficile}
Probab=58.00 E-value=12 Score=35.79 Aligned_cols=75 Identities=11% Similarity=0.032 Sum_probs=50.3
Q ss_pred hHHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccc
Q 014830 230 GSELRR-AGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQ 304 (417)
Q Consensus 230 A~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R 304 (417)
+..|.| .|+.|..+.+ .|. .+....+...-+.+|.+|-+ .+-..+++.|+++|++||.|.+. ++.|.+
T Consensus 53 ~~~l~~~~g~~~~~~~~----se~---~~~~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~ga~~iaIT~~~~S~La~ 125 (352)
T 3g68_A 53 QPYLQNLLDIDVVKMYP----FMI---TEDTFKFDNENTLVVGVSQGGSSYSTYNAMKLAEDKGCKIASMAGCKNALIDE 125 (352)
T ss_dssp HHHHHHHCSSEEEEECG----GGC---CGGGGSSCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTCGGGG
T ss_pred HHHHHHHhCCcEEEEcc----hhh---hhcccCCCCCCcEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCCCCChHHH
Confidence 445666 6888777632 221 11111122134667788865 56778889999999999999985 578999
Q ss_pred ccccccc
Q 014830 305 HADLWVP 311 (417)
Q Consensus 305 ~ADl~fS 311 (417)
.||..+.
T Consensus 126 ~aD~~l~ 132 (352)
T 3g68_A 126 ISDYILT 132 (352)
T ss_dssp GCSEECC
T ss_pred hCCEEEE
Confidence 9998765
No 350
>3knz_A Putative sugar binding protein; structural genomics, joint C structural genomics, JCSG, protein structure initiative; 2.50A {Salmonella enterica subsp}
Probab=57.49 E-value=12 Score=36.18 Aligned_cols=73 Identities=14% Similarity=0.085 Sum_probs=49.6
Q ss_pred HHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCccccc
Q 014830 231 SELRR-AGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQH 305 (417)
Q Consensus 231 ~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ 305 (417)
..|.| .|+.|..+.+ .|.... ...+ ..-+++|.+|-+ .+-..+++.|+++|++||.|.+. ++.|.+.
T Consensus 70 ~~~~~~~g~~~~~~~~----se~~~~---~~~~-~~~dlvI~iS~SGeT~e~l~a~~~ak~~Ga~~IaIT~~~~S~La~~ 141 (366)
T 3knz_A 70 TFMQRWCALPVDVCWP----FMLDDE---TLAR-SGKALVVGISQGGGSLSTLAAMERARNVGHITASMAGVAPATIDRA 141 (366)
T ss_dssp HHHHHHHTSCEEEECG----GGCCHH---HHHH-SCSEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSSSCGGGGG
T ss_pred HHHHHHHCCCeEEEcc----hHHHhh---ccCC-CCCCEEEEEcCCCCCHHHHHHHHHHHHcCCCEEEEECCCCChhhhh
Confidence 33445 6877776643 221111 1112 334667888865 57778899999999999999985 5799999
Q ss_pred cccccc
Q 014830 306 ADLWVP 311 (417)
Q Consensus 306 ADl~fS 311 (417)
||..+.
T Consensus 142 aD~~l~ 147 (366)
T 3knz_A 142 ADYILT 147 (366)
T ss_dssp CSEECC
T ss_pred cCEEEe
Confidence 998774
No 351
>4f11_A Gamma-aminobutyric acid type B receptor subunit 2; venus flytrap module, G-protein coupled receptor, signaling; 2.38A {Homo sapiens} PDB: 4f12_A*
Probab=56.77 E-value=7.1 Score=36.23 Aligned_cols=64 Identities=11% Similarity=0.004 Sum_probs=44.0
Q ss_pred hHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE---EEEcC
Q 014830 230 GSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT---VVVGD 297 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T---VVVGd 297 (417)
..+|++.|+.|-....-|. | ...++..+...+++.|++.....+...+++.|++.|+.. +.|+.
T Consensus 175 ~~~~~~~g~~v~~~~~~~~--d--~~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~ 241 (433)
T 4f11_A 175 TGVLYGEDIEISDTESFSN--D--PCTSVKKLKGNDVRIILGQFDQNMAAKVFCCAYEENMYGSKYQWIIP 241 (433)
T ss_dssp HHHSSSSSCEEEEEEEESS--C--CHHHHHHHHHTTCCEEEEECCHHHHHHHHHHHHHTTCCSTTCEEEEE
T ss_pred HHHHHHcCceEEEEeccCc--C--HHHHHHHHhhCCCeEEEEeCcHHHHHHHHHHHHHcCCCCCCeEEEEc
Confidence 3455666766653322222 1 123444556689999999999999999999999999976 55554
No 352
>4ex6_A ALNB; modified rossman fold, phosphatase, magnesium binding, hydro; 1.25A {Streptomyces SP} PDB: 4ex7_A
Probab=56.61 E-value=35 Score=28.08 Aligned_cols=83 Identities=19% Similarity=0.155 Sum_probs=46.8
Q ss_pred CCCCC-CCchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCc-----chHHHHHHHHHcCCc---
Q 014830 222 KPKVG-YGLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDN-----DFKEMLRKARDANLG--- 291 (417)
Q Consensus 222 ~PKvG-YGLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDs-----dF~~~Lr~AR~~~v~--- 291 (417)
.|.-| ..+-..|++.|+.+-.+++.+... ...|+. .. +..-.+ .++.+|+. +=..+.+.+++.|+.
T Consensus 104 ~~~~~~~~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-~~--l~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~lg~~~~~ 179 (237)
T 4ex6_A 104 LLYPGVLEGLDRLSAAGFRLAMATSKVEKAARAIAEL-TG--LDTRLT-VIAGDDSVERGKPHPDMALHVARGLGIPPER 179 (237)
T ss_dssp GBCTTHHHHHHHHHHTTEEEEEECSSCHHHHHHHHHH-HT--GGGTCS-EEECTTTSSSCTTSSHHHHHHHHHHTCCGGG
T ss_pred ccCCCHHHHHHHHHhCCCcEEEEcCCChHHHHHHHHH-cC--chhhee-eEEeCCCCCCCCCCHHHHHHHHHHcCCCHHH
Confidence 34334 445678899999999999988743 222322 10 111123 23344432 224455666777774
Q ss_pred EEEEcCCCCcc--cccccc
Q 014830 292 TVVVGDSNRGL--GQHADL 308 (417)
Q Consensus 292 TVVVGd~~~~L--~R~ADl 308 (417)
+++|||+..++ .+.|.+
T Consensus 180 ~i~vGD~~~Di~~a~~aG~ 198 (237)
T 4ex6_A 180 CVVIGDGVPDAEMGRAAGM 198 (237)
T ss_dssp EEEEESSHHHHHHHHHTTC
T ss_pred eEEEcCCHHHHHHHHHCCC
Confidence 89999986545 344444
No 353
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=56.21 E-value=5.2 Score=30.81 Aligned_cols=24 Identities=25% Similarity=0.642 Sum_probs=20.1
Q ss_pred CCCC-eecccCCCCCCChHHHHHHH
Q 014830 153 PNDP-YICGVCGRKCKTNLDLKKHF 176 (417)
Q Consensus 153 p~~P-Y~C~VCGRkf~T~~kL~kHF 176 (417)
|+.| -.|.+||-++.+...|.-|.
T Consensus 9 ~~~P~~eC~lC~vkYs~r~slqDHI 33 (55)
T 2yrk_A 9 TDGTKPECTLCGVKYSARLSIRDHI 33 (55)
T ss_dssp CCCCCSCCTTTTCCCCSSSCHHHHH
T ss_pred CCCCCccccccCcccccccchhhhh
Confidence 3344 59999999999999999984
No 354
>3ddh_A Putative haloacid dehalogenase-like family hydrol; hydrolase, HAD superfamily, ST genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides thetaiotaomicron}
Probab=55.73 E-value=19 Score=28.93 Aligned_cols=73 Identities=21% Similarity=0.174 Sum_probs=45.0
Q ss_pred CchHHHHhcc-eEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc---EEEEcCCC-Cc
Q 014830 228 GLGSELRRAG-VFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG---TVVVGDSN-RG 301 (417)
Q Consensus 228 GLA~ELkRAG-V~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~---TVVVGd~~-~~ 301 (417)
.+-..|++.| +.+-.+++.+... ...|+..- +..-.+. ++.+..+.=..+.+.++..|+. +++|||+. .+
T Consensus 112 ~~l~~l~~~g~~~~~i~t~~~~~~~~~~l~~~~---~~~~f~~-~~~~~kpk~~~~~~~~~~lgi~~~~~i~iGD~~~~D 187 (234)
T 3ddh_A 112 ETLKTLKETGKYKLVVATKGDLLDQENKLERSG---LSPYFDH-IEVMSDKTEKEYLRLLSILQIAPSELLMVGNSFKSD 187 (234)
T ss_dssp HHHHHHHHHCCCEEEEEEESCHHHHHHHHHHHT---CGGGCSE-EEEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCC
T ss_pred HHHHHHHhCCCeEEEEEeCCchHHHHHHHHHhC---cHhhhhe-eeecCCCCHHHHHHHHHHhCCCcceEEEECCCcHHH
Confidence 4556788999 8888887776533 33333210 1111333 4455666666677778888875 79999985 66
Q ss_pred ccc
Q 014830 302 LGQ 304 (417)
Q Consensus 302 L~R 304 (417)
+..
T Consensus 188 i~~ 190 (234)
T 3ddh_A 188 IQP 190 (234)
T ss_dssp CHH
T ss_pred hHH
Confidence 643
No 355
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=55.66 E-value=21 Score=31.14 Aligned_cols=62 Identities=11% Similarity=0.055 Sum_probs=44.8
Q ss_pred hHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc
Q 014830 230 GSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG 291 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~ 291 (417)
...|+++|+.+-.+.--...+-..+++.++-+-..|+..|++......+..+.+.|++.|++
T Consensus 67 ~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv~ 128 (257)
T 3lmz_A 67 HDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDFH 128 (257)
T ss_dssp HHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTCE
T ss_pred HHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCCE
Confidence 45566677766644322223444577778777789999999888778899999999999985
No 356
>2aml_A SIS domain protein; 46906266, LMO0035 protein, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=54.93 E-value=13 Score=35.65 Aligned_cols=74 Identities=14% Similarity=0.194 Sum_probs=49.3
Q ss_pred hHHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHc-CCcEEEEcCC-CCccc
Q 014830 230 GSELRR-AGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDA-NLGTVVVGDS-NRGLG 303 (417)
Q Consensus 230 A~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~-~v~TVVVGd~-~~~L~ 303 (417)
+..|.+ .|+.|..+. +.+... .. ..-..-+.+|.+|-+ .+-..+++.|+++ |.+||.|.+. ++.|.
T Consensus 69 ~~~l~~~~g~~v~~~~----~~~~~~---~~-~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~~Ga~vIaIT~~~~S~La 140 (373)
T 2aml_A 69 KYYIENLADVRITIEE----PFNHLY---YE-KLSSHLDLVIGISQSGQSTSTISALERVKKEASVPVVALTSDVTSEIA 140 (373)
T ss_dssp HHHHHHHSSCEEEEEC----HHHHHH---HC-CCCTTCCEEEEECSSSCBHHHHHHHHHHHHHCCCCEEEEESCTTSGGG
T ss_pred HHHHHHHhCCcEEEEC----chhHHH---hc-cCCCCCCEEEEEcCCCCCHHHHHHHHHHHHhCCCcEEEEECCCCChHH
Confidence 344666 688887762 333221 10 111223566777754 4677888999999 9999999996 47899
Q ss_pred cccccccc
Q 014830 304 QHADLWVP 311 (417)
Q Consensus 304 R~ADl~fS 311 (417)
+.||..+.
T Consensus 141 ~~ad~~l~ 148 (373)
T 2aml_A 141 EFADITLD 148 (373)
T ss_dssp GGCSEEEE
T ss_pred HhcCccee
Confidence 99997663
No 357
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=54.71 E-value=5.6 Score=39.78 Aligned_cols=27 Identities=26% Similarity=0.375 Sum_probs=24.5
Q ss_pred Ceec--ccCCCCCCChHHHHHHHHHhhhh
Q 014830 156 PYIC--GVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 156 PY~C--~VCGRkf~T~~kL~kHFKQLHER 182 (417)
.|.| +.|++.|+..+=+.||++.-|..
T Consensus 304 K~~C~~~~C~KLFk~~eFV~KHi~~KH~e 332 (358)
T 3ax1_A 304 KYGCGAKGCTKLFHAAEFVYKHLKLKHTE 332 (358)
T ss_dssp EEEECSSSCCCEESSHHHHHHHHHHHCHH
T ss_pred ccCCCCCCcCcccCCHHHHHHHHHhccHH
Confidence 6799 57999999999999999999953
No 358
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=54.71 E-value=14 Score=33.65 Aligned_cols=67 Identities=21% Similarity=0.123 Sum_probs=43.3
Q ss_pred chHHHHhc--ceEEEEeCC-CchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC--cEEEEcC
Q 014830 229 LGSELRRA--GVFVKTVRD-KPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL--GTVVVGD 297 (417)
Q Consensus 229 LA~ELkRA--GV~VrtV~d-KPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v--~TVVVGd 297 (417)
+...|+++ |+.|....- .+...| ....+..+...+++.|++.+...+...+++.++++|+ +..++|.
T Consensus 162 ~~~~l~~~~~g~~vv~~~~~~~~~~d--~~~~~~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~ 233 (387)
T 3i45_A 162 FKELLLAARPEVTFVAEQWPALYKLD--AGPTVQALQQAEPEGLFNVLFGADLPKFVREGRVRGLFAGRQVVSM 233 (387)
T ss_dssp HHHHHHHHCTTCEEEEEECCCTTCCC--HHHHHHHHHHTCCSEEEECCCTTHHHHHHHHHHHHTSSTTCEEEEE
T ss_pred HHHHHHHhCCCcEEEeeecCCCCCcC--HHHHHHHHHhCCCCEEEEcCccHHHHHHHHHHHHcCCCCCCeEEee
Confidence 34455665 665432211 122222 2334455567899999999899999999999999998 3455554
No 359
>3m9l_A Hydrolase, haloacid dehalogenase-like family; HAD family hydrolase, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Pseudomonas fluorescens} PDB: 2ybd_A* 3r09_A*
Probab=54.65 E-value=26 Score=28.61 Aligned_cols=45 Identities=22% Similarity=0.195 Sum_probs=29.7
Q ss_pred hCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcccccccccc
Q 014830 263 SSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHADLWV 310 (417)
Q Consensus 263 ~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~f 310 (417)
+...+-++.|-|.. .+ +..|+..|+++|.|+.+...++..||.-+
T Consensus 141 g~~~~~~i~iGD~~--~D-i~~a~~aG~~~i~v~~~~~~~~~~ad~v~ 185 (205)
T 3m9l_A 141 DVSPSRMVMVGDYR--FD-LDCGRAAGTRTVLVNLPDNPWPELTDWHA 185 (205)
T ss_dssp TCCGGGEEEEESSH--HH-HHHHHHHTCEEEECSSSSCSCGGGCSEEC
T ss_pred CCCHHHEEEECCCH--HH-HHHHHHcCCEEEEEeCCCCcccccCCEEe
Confidence 33345555666543 33 56788889889999887666666677544
No 360
>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A
Probab=54.60 E-value=9 Score=27.27 Aligned_cols=29 Identities=17% Similarity=0.182 Sum_probs=25.9
Q ss_pred CccCCCCCeecccCCCCCCChHHHHHHHH
Q 014830 149 GVAVPNDPYICGVCGRKCKTNLDLKKHFK 177 (417)
Q Consensus 149 G~v~p~~PY~C~VCGRkf~T~~kL~kHFK 177 (417)
|...|..++.|.-|.-.|..-.++..|-|
T Consensus 1 ~~~~~~~~~~C~~C~IsF~~l~ty~aHKk 29 (36)
T 1fu9_A 1 GSAAEVMKKYCSTCDISFNYVKTYLAHKQ 29 (36)
T ss_dssp CCCCCCCCSEETTTTEECSSHHHHHHHHH
T ss_pred CCCCccCcCeeccccceehhhHHHhhhhe
Confidence 55678889999999999999999999965
No 361
>3hba_A Putative phosphosugar isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 2.00A {Shewanella denitrificans OS217}
Probab=54.23 E-value=15 Score=34.97 Aligned_cols=76 Identities=13% Similarity=0.121 Sum_probs=50.1
Q ss_pred hHHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccc
Q 014830 230 GSELRR-AGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQ 304 (417)
Q Consensus 230 A~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R 304 (417)
+.-|.| .|+.|..+.+ ..+. +........=+.+|.+|-+ .+-..+++.|+++|.+||.|.+. ++.|.+
T Consensus 61 ~~~l~~~~g~~v~~~~~-~~~~------~~~~~~~~~~dl~i~iS~SG~T~e~~~a~~~ak~~g~~~i~IT~~~~S~la~ 133 (334)
T 3hba_A 61 KYLFEIEASIPTFAAAP-SVAS------VYGKTLKLAGGLVIVISQSGRSPDILAQARMAKNAGAFCVALVNDETAPIKD 133 (334)
T ss_dssp HHHHHHHHCCCEEECCH-HHHH------TSCCCCCCTTCEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSGGGG
T ss_pred HHHHHHHhCCcEEEEcc-hHHH------HhcccCCCCCCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEeCCCCChHHH
Confidence 445555 8988887621 1111 1111111223566777765 56778899999999999999986 578999
Q ss_pred ccccccch
Q 014830 305 HADLWVPW 312 (417)
Q Consensus 305 ~ADl~fSW 312 (417)
.||..+.-
T Consensus 134 ~ad~~l~~ 141 (334)
T 3hba_A 134 IVDVVIPL 141 (334)
T ss_dssp TSSEEEEC
T ss_pred hcCEeeee
Confidence 99987643
No 362
>2zj3_A Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1; glucosamine-6-phosphate synthase, aldose/ketose isomerase, rossmann-like fold; HET: G6P; 1.90A {Homo sapiens} PDB: 2zj4_A* 2v4m_A*
Probab=54.11 E-value=8.8 Score=36.80 Aligned_cols=46 Identities=22% Similarity=0.220 Sum_probs=36.9
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCccccccccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQHADLWVP 311 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ADl~fS 311 (417)
=+.+|.+|-+ .+-..+++.||++|.+||.|.+. ++.|.+.||..+.
T Consensus 108 ~dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 157 (375)
T 2zj3_A 108 DDVCFFLSQSGETADTLMGLRYCKERGALTVGITNTVGSSISRETDCGVH 157 (375)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHSSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCcEEEEECCCCChHHHhCCEeee
Confidence 3567778764 56677889999999999999996 4789999997664
No 363
>3n07_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; structural genomics, phosphatase, PSI-2, protein structure initiative; HET: MSE; 1.76A {Vibrio cholerae}
Probab=54.01 E-value=23 Score=30.67 Aligned_cols=71 Identities=14% Similarity=0.237 Sum_probs=46.0
Q ss_pred HHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--cc
Q 014830 231 SELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL--GQ 304 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L--~R 304 (417)
..|+++|+.+-.++.++... ...++ ..|++.++-.. .+.-..+.+.+++.|+ .+++|||+..++ .+
T Consensus 62 ~~L~~~G~~~~ivT~~~~~~~~~~l~-------~lgi~~~~~~~-k~k~~~~~~~~~~~~~~~~~~~~vGD~~nDi~~~~ 133 (195)
T 3n07_A 62 KALMNAGIEIAIITGRRSQIVENRMK-------ALGISLIYQGQ-DDKVQAYYDICQKLAIAPEQTGYIGDDLIDWPVME 133 (195)
T ss_dssp HHHHHTTCEEEEECSSCCHHHHHHHH-------HTTCCEEECSC-SSHHHHHHHHHHHHCCCGGGEEEEESSGGGHHHHT
T ss_pred HHHHHCCCEEEEEECcCHHHHHHHHH-------HcCCcEEeeCC-CCcHHHHHHHHHHhCCCHHHEEEEcCCHHHHHHHH
Confidence 67899999999999988754 22222 24665443222 3445566667777776 689999986555 44
Q ss_pred ccccc
Q 014830 305 HADLW 309 (417)
Q Consensus 305 ~ADl~ 309 (417)
.|++.
T Consensus 134 ~ag~~ 138 (195)
T 3n07_A 134 KVALR 138 (195)
T ss_dssp TSSEE
T ss_pred HCCCE
Confidence 55544
No 364
>4gib_A Beta-phosphoglucomutase; rossmann fold, HAD-like, structural genomics, center for structural genomics of infectious DISE csgid, isomerase; 2.27A {Clostridium difficile}
Probab=53.46 E-value=1.1e+02 Score=26.28 Aligned_cols=17 Identities=29% Similarity=0.350 Sum_probs=11.8
Q ss_pred HHHHHHcCCcEEEEcCC
Q 014830 282 LRKARDANLGTVVVGDS 298 (417)
Q Consensus 282 Lr~AR~~~v~TVVVGd~ 298 (417)
+..|+++|++||-|++.
T Consensus 200 i~aA~~aG~~~i~v~~~ 216 (250)
T 4gib_A 200 IDAINSANMFSVGVGNY 216 (250)
T ss_dssp HHHHHHTTCEEEEESCT
T ss_pred HHHHHHcCCEEEEECCh
Confidence 56777777777777653
No 365
>1nri_A Hypothetical protein HI0754; structural genomics, haemophilus influ PSI, protein structure initiative, midwest center for struc genomics; 1.90A {Haemophilus influenzae} SCOP: c.80.1.3
Probab=53.32 E-value=8.5 Score=36.03 Aligned_cols=48 Identities=13% Similarity=0.079 Sum_probs=39.2
Q ss_pred CcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCCC-Cccccccccccch
Q 014830 265 GVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDSN-RGLGQHADLWVPW 312 (417)
Q Consensus 265 gv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~~-~~L~R~ADl~fSW 312 (417)
.=|++|.+|-+ .+-.++++.||++|.+||.|.+.. +.|.+.||+.+.-
T Consensus 140 ~~DvvI~IS~SG~T~~vi~al~~Ak~~Ga~~IaIT~~~~S~La~~AD~~I~~ 191 (306)
T 1nri_A 140 KNDVLVGIAASGRTPYVIAGLQYAKSLGALTISIASNPKSEMAEIADIAIET 191 (306)
T ss_dssp TTSEEEEECTTSCCHHHHHHHHHHHHHTCEEEEEESSTTCHHHHHSSEEEEC
T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCChHHHhCCEEEEc
Confidence 35788888864 456788999999999999999864 6899999987754
No 366
>1jye_A Lactose operon repressor; gene regulation, protein stability, protein DNA-binding, transcription; 1.70A {Escherichia coli} SCOP: c.93.1.1 PDB: 1lbi_A 1lbg_A* 1lbh_A 1jyf_A 3edc_A 1efa_A* 1jwl_A* 2pe5_A* 1tlf_A* 2p9h_A* 2paf_A* 1cjg_A* 1l1m_A 1osl_A 2kei_A* 2kej_A* 2kek_A* 2bjc_A 1lqc_A 1lcc_A* ...
Probab=52.71 E-value=33 Score=31.09 Aligned_cols=70 Identities=14% Similarity=0.077 Sum_probs=42.7
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+.......... ......+..++.++++-||+++....-..++..+...++..|+++..
T Consensus 82 gi~~~a~~~g~~~~~~~~~~~~~-~~~~~~l~~l~~~~vdGiIi~~~~~~~~~~~~~~~~~~iPvV~i~~~ 151 (349)
T 1jye_A 82 AILSRADQLGASVVVSMVERSGV-EACKTAVHNLLAQRVSGLIINYPLDDQDAIAVEAACTNVPALFLDVS 151 (349)
T ss_dssp HHHHHHHHTTCEEEEEECCSSSH-HHHHHHHHHHHTTTCSCEEEESCCCHHHHHHHHHHTTTSCEEESSSC
T ss_pred HHHHHHHHcCCEEEEEeCCCCcH-HHHHHHHHHHHHCCCCEEEEecCCCChhHHHHHHhhCCCCEEEEccc
Confidence 56777888898887653221111 11234555667899999999842222223345566789998888753
No 367
>2zg6_A Putative uncharacterized protein ST2620, probable 2-haloalkanoic; probable 2-haloalkanoic acid dehalogenase, hydrolase, structural genomics; 2.40A {Sulfolobus tokodaii}
Probab=52.68 E-value=29 Score=28.89 Aligned_cols=77 Identities=14% Similarity=0.072 Sum_probs=41.9
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcch-----HHHHHHHHHcCCcEEEEcCCCC-c
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDF-----KEMLRKARDANLGTVVVGDSNR-G 301 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF-----~~~Lr~AR~~~v~TVVVGd~~~-~ 301 (417)
.+-..|+.+|+.+-.+++.+..+...|++.= +..-.+. ++.|++... ..+.+.+++.|+..++|||+.. +
T Consensus 102 ~~l~~l~~~g~~~~i~Tn~~~~~~~~l~~~g---l~~~f~~-~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~vgD~~~~D 177 (220)
T 2zg6_A 102 EFLEGLKSNGYKLALVSNASPRVKTLLEKFD---LKKYFDA-LALSYEIKAVKPNPKIFGFALAKVGYPAVHVGDIYELD 177 (220)
T ss_dssp HHHHHHHTTTCEEEECCSCHHHHHHHHHHHT---CGGGCSE-EC-----------CCHHHHHHHHHCSSEEEEESSCCCC
T ss_pred HHHHHHHHCCCEEEEEeCCcHHHHHHHHhcC---cHhHeeE-EEeccccCCCCCCHHHHHHHHHHcCCCeEEEcCCchHh
Confidence 4456788899999999998764433333210 0001232 444554332 1245566777887799999875 5
Q ss_pred c--cccccc
Q 014830 302 L--GQHADL 308 (417)
Q Consensus 302 L--~R~ADl 308 (417)
+ ++.|.+
T Consensus 178 i~~a~~aG~ 186 (220)
T 2zg6_A 178 YIGAKRSYV 186 (220)
T ss_dssp CCCSSSCSE
T ss_pred HHHHHHCCC
Confidence 5 444443
No 368
>2hoq_A Putative HAD-hydrolase PH1655; haloacid dehalogenase, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.70A {Pyrococcus horikoshii}
Probab=52.06 E-value=22 Score=29.76 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=43.4
Q ss_pred CchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcc---eEEEEeCCcc-----hHHHHHHHHHcCC---cEEEE
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVD---WMFLVSDDND-----FKEMLRKARDANL---GTVVV 295 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~---cLvLVSDDsd-----F~~~Lr~AR~~~v---~TVVV 295 (417)
.+-..|+..|+.+-.+++.+... ...|++ .|+. -.+..|++.. =..+.+.+++.|+ .+++|
T Consensus 101 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~-------~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~g~~~~~~i~i 173 (241)
T 2hoq_A 101 KVLIRLKELGYELGIITDGNPVKQWEKILR-------LELDDFFEHVIISDFEGVKKPHPKIFKKALKAFNVKPEEALMV 173 (241)
T ss_dssp HHHHHHHHHTCEEEEEECSCHHHHHHHHHH-------TTCGGGCSEEEEGGGGTCCTTCHHHHHHHHHHHTCCGGGEEEE
T ss_pred HHHHHHHHCCCEEEEEECCCchhHHHHHHH-------cCcHhhccEEEEeCCCCCCCCCHHHHHHHHHHcCCCcccEEEE
Confidence 45567888999998898887643 222221 2322 1244455432 2345566677777 47999
Q ss_pred cCCC-Ccc--cccccc
Q 014830 296 GDSN-RGL--GQHADL 308 (417)
Q Consensus 296 Gd~~-~~L--~R~ADl 308 (417)
||+. .++ .+.|.+
T Consensus 174 GD~~~~Di~~a~~aG~ 189 (241)
T 2hoq_A 174 GDRLYSDIYGAKRVGM 189 (241)
T ss_dssp ESCTTTTHHHHHHTTC
T ss_pred CCCchHhHHHHHHCCC
Confidence 9986 555 344444
No 369
>3eua_A Putative fructose-aminoacid-6-phosphate deglycase; putative phosphosugar isomerase, structural genomics, joint for structural genomics, JCSG; HET: MSE FLC; 1.90A {Bacillus subtilis}
Probab=51.65 E-value=10 Score=35.64 Aligned_cols=75 Identities=16% Similarity=0.113 Sum_probs=51.0
Q ss_pred chHHHHhc--ceEEEEeCCCchhHHHHHHHHHHHhhhCC-cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCc
Q 014830 229 LGSELRRA--GVFVKTVRDKPQAADWALKRQMQHSMSSG-VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRG 301 (417)
Q Consensus 229 LA~ELkRA--GV~VrtV~dKPqAAD~ALkrhm~~~m~rg-v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~ 301 (417)
++.-|.|- |+.|..+. +.+.. ++ .....+ -+++|.+|-+ .+-..+++.|+++|++||.|.+. ++.
T Consensus 43 ~~~~l~~~~~g~~~~~~~----~~e~~---~~-~~~~l~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 114 (329)
T 3eua_A 43 SKYVFDRESKSINSDLYS----ANEFI---QR-NPVQLGEKSLVILCSHSGNTPETVKAAAFARGKGALTIAMTFKPESP 114 (329)
T ss_dssp HHHHHHHHCSSCEEEEEE----HHHHH---HH-CCTTCSTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSH
T ss_pred HHHHHHHhcCCCeEEEEc----cHHHH---hc-CccCCCCCcEEEEEcCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCh
Confidence 45566665 88888773 33321 11 111122 3567777765 46778889999999999999985 578
Q ss_pred cccccccccc
Q 014830 302 LGQHADLWVP 311 (417)
Q Consensus 302 L~R~ADl~fS 311 (417)
|.+.||..+.
T Consensus 115 La~~ad~~l~ 124 (329)
T 3eua_A 115 LAQEAQYVAQ 124 (329)
T ss_dssp HHHHSSEEEE
T ss_pred HHHhCCEEEE
Confidence 9999998763
No 370
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress, oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A 3pza_A 3qvd_A 1nnq_A 2hr5_A
Probab=51.45 E-value=5.8 Score=35.15 Aligned_cols=27 Identities=26% Similarity=0.453 Sum_probs=18.5
Q ss_pred hhcchhhccCccCCCCCeecccCCCCC
Q 014830 140 KQFDILERRGVAVPNDPYICGVCGRKC 166 (417)
Q Consensus 140 k~ld~lE~~G~v~p~~PY~C~VCGRkf 166 (417)
++|+.++.......+.-|+|++||.-.
T Consensus 122 ~~l~~l~~~~~~~~~~~~~C~~CG~i~ 148 (170)
T 3pwf_A 122 KAKEKAEKGEDIEIKKVYICPICGYTA 148 (170)
T ss_dssp HHHHHHTTTCCCCCSCEEECTTTCCEE
T ss_pred HHHHHHhcCCcCCCCCeeEeCCCCCee
Confidence 567777755554444678999999843
No 371
>2a3n_A Putative glucosamine-fructose-6-phosphate aminotr; structural genomics, joint center for structural genomics; HET: MSE; 1.23A {Salmonella typhimurium}
Probab=51.37 E-value=12 Score=35.51 Aligned_cols=95 Identities=13% Similarity=0.170 Sum_probs=59.0
Q ss_pred cchHHHHHHHhhcC--CC-C---CCC--------chHHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhh-CCcceEEEE
Q 014830 209 GNDKYNEAARSLLK--PK-V---GYG--------LGSELRR-AGVFVKTVRDKPQAADWALKRQMQHSMS-SGVDWMFLV 272 (417)
Q Consensus 209 k~~KY~~AArevL~--PK-v---GYG--------LA~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~-rgv~cLvLV 272 (417)
.....++++..+.. ++ + |.| ++.-|.| .|+.|.... +.+.. ++ .... ..-+.+|.+
T Consensus 38 ~~~~i~~~~~~i~~~~~~~I~i~G~G~S~~~a~~~~~~l~~~~g~~~~~~~----~~e~~---~~-~~~~l~~~dlvI~i 109 (355)
T 2a3n_A 38 ARQKAEQVADEIYQAGFSSLFFASVGGSLAPMMAINEFAKELTTLPVYVEQ----AAELI---HK-GNKRLNKDSVVITL 109 (355)
T ss_dssp THHHHHHHHHHHHHHCCSCEEEEECGGGHHHHHHHHHHHHHHCCSCEEEEE----HHHHH---HH-CCTTCCTTCEEEEE
T ss_pred hHHHHHHHHHHHHhCCCCEEEEEEccHHHHHHHHHHHHHHhhcCCeEEEcC----cHHHH---hh-chhcCCCCCEEEEE
Confidence 44555666665554 32 2 444 2235677 888887653 23211 11 1112 233566777
Q ss_pred eCC---cchHHHHHHHHHcCCcEEEEcCC-CCccccccccccc
Q 014830 273 SDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQHADLWVP 311 (417)
Q Consensus 273 SDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ADl~fS 311 (417)
|-+ .+-..+++.|+++|.+||.|.+. ++.|.+.||.-+.
T Consensus 110 S~SG~t~e~~~a~~~ak~~Ga~vi~IT~~~~S~La~~ad~~l~ 152 (355)
T 2a3n_A 110 SKSGDTKESVAIAEWCKAQGIRVVAITKNADSPLAQAATWHIP 152 (355)
T ss_dssp CSSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHHTCSEEEE
T ss_pred eCCCCCHHHHHHHHHHHHCCCeEEEEECCCCChhhHhCCEEEE
Confidence 754 45677888999999999999985 4789999997653
No 372
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=50.93 E-value=21 Score=29.82 Aligned_cols=42 Identities=17% Similarity=0.282 Sum_probs=27.6
Q ss_pred HHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 255 KRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 255 krhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
..-++.+...|+..+++ .....-..+++.|++.|++ +||..+
T Consensus 91 ~~vv~~~~~~gi~~i~~-~~g~~~~~l~~~a~~~Gi~--vvGpnc 132 (144)
T 2d59_A 91 MEYVEQAIKKGAKVVWF-QYNTYNREASKKADEAGLI--IVANRC 132 (144)
T ss_dssp HHHHHHHHHHTCSEEEE-CTTCCCHHHHHHHHHTTCE--EEESCC
T ss_pred HHHHHHHHHcCCCEEEE-CCCchHHHHHHHHHHcCCE--EEcCCc
Confidence 34445566777776654 4444457788888888877 677755
No 373
>2yj3_A Copper-transporting ATPase; hydrolase, P-type ATPase, COPB, heavy metal translocation; 2.20A {Sulfolobus solfataricus} PDB: 2iye_A 2yj6_A* 2yj5_A* 2yj4_A*
Probab=56.23 E-value=3.3 Score=37.13 Aligned_cols=79 Identities=13% Similarity=0.111 Sum_probs=48.4
Q ss_pred CchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCc--ccc
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRG--LGQ 304 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~--L~R 304 (417)
.+-..|+..|+.+-.+++++... ...++. .|++.++-..-..++..+++.....+=.+++|||+..+ -.+
T Consensus 143 ~~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-------~gl~~~f~~~~p~~k~~~~~~l~~~~~~~~~VGD~~~D~~aa~ 215 (263)
T 2yj3_A 143 DYLEKLKNEGLKIIILSGDKEDKVKELSKE-------LNIQEYYSNLSPEDKVRIIEKLKQNGNKVLMIGDGVNDAAALA 215 (263)
Confidence 34457999999999999887743 222222 23322211001345666666666655578999998543 367
Q ss_pred ccccccchh
Q 014830 305 HADLWVPWI 313 (417)
Q Consensus 305 ~ADl~fSW~ 313 (417)
.|++.+.|-
T Consensus 216 ~Agv~va~g 224 (263)
T 2yj3_A 216 LADVSVAMG 224 (263)
Confidence 788877774
No 374
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=50.35 E-value=15 Score=29.19 Aligned_cols=72 Identities=21% Similarity=0.185 Sum_probs=43.0
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHH-------------HHHhhhCCcceEEEEeC-CcchHHHHHHHHHcCCc
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQ-------------MQHSMSSGVDWMFLVSD-DNDFKEMLRKARDANLG 291 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrh-------------m~~~m~rgv~cLvLVSD-DsdF~~~Lr~AR~~~v~ 291 (417)
|..+|..|.+.|+.|..+...|+..+.+.... +...--.+++.+|+..+ +..-..+...||+.+..
T Consensus 18 G~~la~~L~~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~~n~~~~~~a~~~~~~ 97 (141)
T 3llv_A 18 GVGLVRELTAAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDEFNLKILKALRSVSDV 97 (141)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHHHHHHHHHHHHHhCCc
Confidence 34588999999999998877776655443221 11111245676766555 33334566777777755
Q ss_pred EEEEcC
Q 014830 292 TVVVGD 297 (417)
Q Consensus 292 TVVVGd 297 (417)
.|++-.
T Consensus 98 ~iia~~ 103 (141)
T 3llv_A 98 YAIVRV 103 (141)
T ss_dssp CEEEEE
T ss_pred eEEEEE
Confidence 555433
No 375
>4eze_A Haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 2.27A {Salmonella enterica subsp}
Probab=50.29 E-value=28 Score=32.49 Aligned_cols=85 Identities=16% Similarity=0.243 Sum_probs=51.5
Q ss_pred cCCCCC-CCchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceE---EEEeCC---------------cchHH
Q 014830 221 LKPKVG-YGLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWM---FLVSDD---------------NDFKE 280 (417)
Q Consensus 221 L~PKvG-YGLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cL---vLVSDD---------------sdF~~ 280 (417)
+.|.-| -.+-..|++.|+.+-.|++.+... ...+++ .|++.+ ++..++ +.-..
T Consensus 178 ~~l~pg~~e~L~~Lk~~G~~v~IvSn~~~~~~~~~l~~-------lgl~~~f~~~l~~~dg~~tg~i~~~~~~~kpkp~~ 250 (317)
T 4eze_A 178 MTLSPGLLTILPVIKAKGFKTAIISGGLDIFTQRLKAR-------YQLDYAFSNTVEIRDNVLTDNITLPIMNAANKKQT 250 (317)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-------HTCSEEEEECEEEETTEEEEEECSSCCCHHHHHHH
T ss_pred CEECcCHHHHHHHHHhCCCEEEEEeCccHHHHHHHHHH-------cCCCeEEEEEEEeeCCeeeeeEecccCCCCCCHHH
Confidence 344444 456678999999999999988743 222222 233322 222222 22233
Q ss_pred HHHHHHHcCC---cEEEEcCCCCcc--ccccccccch
Q 014830 281 MLRKARDANL---GTVVVGDSNRGL--GQHADLWVPW 312 (417)
Q Consensus 281 ~Lr~AR~~~v---~TVVVGd~~~~L--~R~ADl~fSW 312 (417)
+.+.+++.|+ .+++|||+..++ .+.|.+.+-|
T Consensus 251 ~~~~~~~lgv~~~~~i~VGDs~~Di~aa~~AG~~va~ 287 (317)
T 4eze_A 251 LVDLAARLNIATENIIACGDGANDLPMLEHAGTGIAW 287 (317)
T ss_dssp HHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHcCCCcceEEEEeCCHHHHHHHHHCCCeEEe
Confidence 5566677776 689999987555 6677776666
No 376
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav myristol group, icosahedral virus; HET: MYR; 3.30A {Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Probab=49.37 E-value=3.5 Score=46.28 Aligned_cols=28 Identities=29% Similarity=0.674 Sum_probs=0.0
Q ss_pred CCeecccCCCCCCChHHHHHHHHHhhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFKQLHER 182 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFKQLHER 182 (417)
..|+|.||++.|.+.+.|.-|.++=|--
T Consensus 115 ~~~~C~vC~a~F~S~~~L~~H~~ttHs~ 142 (1214)
T 3iyl_X 115 SSYVCNVCNARFSTMSALSEHLRSDHRD 142 (1214)
T ss_dssp ----------------------------
T ss_pred cceeehhhhhhcCCHHHHHHHHhhcccc
Confidence 3699999999999999999998886643
No 377
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=49.23 E-value=9.5 Score=33.88 Aligned_cols=75 Identities=9% Similarity=0.177 Sum_probs=47.0
Q ss_pred CCCchHHHHhcceEEEEeCCCchh----------HHHHHHHHHHHhhhCCcceEEEEeCCcch--------------HHH
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQA----------ADWALKRQMQHSMSSGVDWMFLVSDDNDF--------------KEM 281 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqA----------AD~ALkrhm~~~m~rgv~cLvLVSDDsdF--------------~~~ 281 (417)
|.-|+..|.+.|..|..+...+.. .|.. ...+...+. +++.||-....... ..+
T Consensus 15 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~Dl~-~~~~~~~~~-~~d~Vih~a~~~~~~~~~~~~~~n~~~~~~l 92 (311)
T 3m2p_A 15 GQYVVESIKNDGNTPIILTRSIGNKAINDYEYRVSDYT-LEDLINQLN-DVDAVVHLAATRGSQGKISEFHDNEILTQNL 92 (311)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCC-----CCEEEECCCC-HHHHHHHTT-TCSEEEECCCCCCSSSCGGGTHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCEEEEEeCCCCcccCCceEEEEcccc-HHHHHHhhc-CCCEEEEccccCCCCChHHHHHHHHHHHHHH
Confidence 456788888889888866444332 2333 333444444 89998876543322 578
Q ss_pred HHHHHHcCCcEEEEcCCCCcc
Q 014830 282 LRKARDANLGTVVVGDSNRGL 302 (417)
Q Consensus 282 Lr~AR~~~v~TVVVGd~~~~L 302 (417)
++.|++.+++.+|.-.+....
T Consensus 93 l~a~~~~~~~r~v~~SS~~vy 113 (311)
T 3m2p_A 93 YDACYENNISNIVYASTISAY 113 (311)
T ss_dssp HHHHHHTTCCEEEEEEEGGGC
T ss_pred HHHHHHcCCCEEEEEccHHHh
Confidence 999999999976644433333
No 378
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=49.11 E-value=11 Score=31.39 Aligned_cols=63 Identities=17% Similarity=0.155 Sum_probs=38.9
Q ss_pred CCchHHHHhc-ceEEEEeCCCchhHHHHHHHHH-------------HHh-hhCCcceEEEEeC-CcchHHHHHHHHHcC
Q 014830 227 YGLGSELRRA-GVFVKTVRDKPQAADWALKRQM-------------QHS-MSSGVDWMFLVSD-DNDFKEMLRKARDAN 289 (417)
Q Consensus 227 YGLA~ELkRA-GV~VrtV~dKPqAAD~ALkrhm-------------~~~-m~rgv~cLvLVSD-DsdF~~~Lr~AR~~~ 289 (417)
..+|..|++. |+.|..+...|+..+.+..... ... --.+++.+|+.+. +..-..++..++..+
T Consensus 52 ~~~a~~L~~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 52 TGAYDELRARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHHQGNQTALEQLQRRN 130 (183)
T ss_dssp HHHHHHHHHHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHhccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCChHHHHHHHHHHHHHC
Confidence 4468889988 9999888777766655432211 111 0235777777444 445556677888877
No 379
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=48.90 E-value=68 Score=26.54 Aligned_cols=32 Identities=13% Similarity=0.201 Sum_probs=16.7
Q ss_pred hhCCcceEEEEeCC--cchHHHHHHHHHcCCcEEEEcC
Q 014830 262 MSSGVDWMFLVSDD--NDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 262 m~rgv~cLvLVSDD--sdF~~~Lr~AR~~~v~TVVVGd 297 (417)
++...+.++.|-|+ .| +..|++.|++||.|..
T Consensus 110 ~~~~~~~~l~VGD~~~~D----i~~A~~aG~~~i~v~~ 143 (189)
T 3ib6_A 110 LQIDKTEAVMVGNTFESD----IIGANRAGIHAIWLQN 143 (189)
T ss_dssp HTCCGGGEEEEESBTTTT----HHHHHHTTCEEEEECC
T ss_pred cCCCcccEEEECCCcHHH----HHHHHHCCCeEEEECC
Confidence 34444445555554 23 3456666666666654
No 380
>3hgm_A Universal stress protein TEAD; rossman fold, signaling protein; HET: ATP; 1.90A {Halomonas elongata} SCOP: c.26.2.0
Probab=48.74 E-value=69 Score=24.70 Aligned_cols=49 Identities=20% Similarity=0.228 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHhhhCCcce----EEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 250 ADWALKRQMQHSMSSGVDW----MFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 250 AD~ALkrhm~~~m~rgv~c----LvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
+...|.+-...+-..|+.+ ..++.+ .--..+++.|++.+..-||+|...
T Consensus 68 ~~~~l~~~~~~~~~~g~~~~~~~~~~~~g-~~~~~I~~~a~~~~~dliV~G~~~ 120 (147)
T 3hgm_A 68 ATEIAVQAKTRATELGVPADKVRAFVKGG-RPSRTIVRFARKRECDLVVIGAQG 120 (147)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGEEEEEEES-CHHHHHHHHHHHTTCSEEEECSSC
T ss_pred HHHHHHHHHHHHHhcCCCccceEEEEecC-CHHHHHHHHHHHhCCCEEEEeCCC
Confidence 3444444444444577665 344444 456889999999999999999854
No 381
>3iru_A Phoshonoacetaldehyde hydrolase like protein; phosphonoacetaldehyde hydrolase like P structural genomics, PSI-2, protein structure initiative; 2.30A {Oleispira antarctica} SCOP: c.108.1.0
Probab=48.49 E-value=28 Score=29.21 Aligned_cols=79 Identities=15% Similarity=0.045 Sum_probs=43.0
Q ss_pred cCCCCC-CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCc-ceEEEEeCCcch-----HHHHHHHHHcCCc--
Q 014830 221 LKPKVG-YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGV-DWMFLVSDDNDF-----KEMLRKARDANLG-- 291 (417)
Q Consensus 221 L~PKvG-YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv-~cLvLVSDDsdF-----~~~Lr~AR~~~v~-- 291 (417)
..|.-| ..+-..|+..|+.+-.+++.+...=..+.++. --.+. --.+..+++... ..+.+.+++.|+.
T Consensus 110 ~~~~~~~~~~l~~l~~~g~~~~i~tn~~~~~~~~~l~~~---~~~~~~~~~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~ 186 (277)
T 3iru_A 110 SQLIPGWKEVFDKLIAQGIKVGGNTGYGPGMMAPALIAA---KEQGYTPASTVFATDVVRGRPFPDMALKVALELEVGHV 186 (277)
T ss_dssp CCBCTTHHHHHHHHHHTTCEEEEECSSCHHHHHHHHHHH---HHTTCCCSEEECGGGSSSCTTSSHHHHHHHHHHTCSCG
T ss_pred CccCcCHHHHHHHHHHcCCeEEEEeCCchHHHHHHHHhc---CcccCCCceEecHHhcCCCCCCHHHHHHHHHHcCCCCC
Confidence 334333 34456788899999999988874311222211 11221 123344444322 3455666677764
Q ss_pred --EEEEcCCCCcc
Q 014830 292 --TVVVGDSNRGL 302 (417)
Q Consensus 292 --TVVVGd~~~~L 302 (417)
+++|||+..++
T Consensus 187 ~~~i~vGD~~~Di 199 (277)
T 3iru_A 187 NGCIKVDDTLPGI 199 (277)
T ss_dssp GGEEEEESSHHHH
T ss_pred ccEEEEcCCHHHH
Confidence 58999976444
No 382
>3fkj_A Putative phosphosugar isomerases; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.12A {Salmonella typhimurium LT2}
Probab=48.46 E-value=12 Score=35.60 Aligned_cols=74 Identities=15% Similarity=0.120 Sum_probs=49.0
Q ss_pred chHHHHhc--ceEEEEeCCCchhHHHHHHHHHHHhhhCC-cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCc
Q 014830 229 LGSELRRA--GVFVKTVRDKPQAADWALKRQMQHSMSSG-VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRG 301 (417)
Q Consensus 229 LA~ELkRA--GV~VrtV~dKPqAAD~ALkrhm~~~m~rg-v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~ 301 (417)
++.-|.|. |+.|.... +.+.. ++ .....+ -+.+|.+|-+ .+-..+++.|+++|++||.|.+. ++.
T Consensus 58 ~~~~l~~~~~g~~~~~~~----~~e~~---~~-~~~~l~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~ 129 (347)
T 3fkj_A 58 GKYFLDCEASKLAVGYIT----SNEFV---HA-TPKALGKNSVVILASQQGNTAETVAAARVAREKGAATIGLVYQPDTP 129 (347)
T ss_dssp HHHHHHHHCSSCEEEEEE----HHHHH---HS-CCTTCSTTEEEEEEESSSCCHHHHHHHHHHHHHTCEEEEEESSTTCH
T ss_pred HHHHHHHHhCCCeEEEeC----cHHHH---hh-CcCCCCCCCEEEEEeCCCCcHHHHHHHHHHHHCCCcEEEEeCCCCCh
Confidence 34556664 88887652 33221 11 011223 3566777765 46778889999999999999985 578
Q ss_pred ccccccccc
Q 014830 302 LGQHADLWV 310 (417)
Q Consensus 302 L~R~ADl~f 310 (417)
|.+.||..+
T Consensus 130 La~~ad~~l 138 (347)
T 3fkj_A 130 LCEYSDYII 138 (347)
T ss_dssp HHHTCSEEE
T ss_pred HHhhcCeEE
Confidence 999999865
No 383
>3ib6_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.20A {Listeria monocytogenes}
Probab=48.35 E-value=54 Score=27.16 Aligned_cols=72 Identities=13% Similarity=0.174 Sum_probs=41.5
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcc---eEEEEeCCc---------chHHHHHHHHHcCC---cE
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVD---WMFLVSDDN---------DFKEMLRKARDANL---GT 292 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~---cLvLVSDDs---------dF~~~Lr~AR~~~v---~T 292 (417)
.+-..|+++|+.+-.+++.+...-..+..-+. ..|+. -.|+.|++. +=.-+.+.+++.|+ .+
T Consensus 41 ~~L~~L~~~g~~~~i~Tn~~~~~~~~~~~~l~---~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~ 117 (189)
T 3ib6_A 41 ETLEKVKQLGFKQAILSNTATSDTEVIKRVLT---NFGIIDYFDFIYASNSELQPGKMEKPDKTIFDFTLNALQIDKTEA 117 (189)
T ss_dssp HHHHHHHHTTCEEEEEECCSSCCHHHHHHHHH---HTTCGGGEEEEEECCTTSSTTCCCTTSHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHCCCEEEEEECCCccchHHHHHHHH---hcCchhheEEEEEccccccccCCCCcCHHHHHHHHHHcCCCcccE
Confidence 45578999999999999988521011222111 24432 235556542 22334445555665 57
Q ss_pred EEEcCC-CCcc
Q 014830 293 VVVGDS-NRGL 302 (417)
Q Consensus 293 VVVGd~-~~~L 302 (417)
++|||+ ..++
T Consensus 118 l~VGD~~~~Di 128 (189)
T 3ib6_A 118 VMVGNTFESDI 128 (189)
T ss_dssp EEEESBTTTTH
T ss_pred EEECCCcHHHH
Confidence 999998 5554
No 384
>3skx_A Copper-exporting P-type ATPase B; P1B-ATPase, ATP binding domain, copper(II) transporter, MEMB protein, hydrolase; 1.59A {Archaeoglobus fulgidus} PDB: 3sky_A*
Probab=48.24 E-value=33 Score=29.16 Aligned_cols=76 Identities=18% Similarity=0.229 Sum_probs=45.3
Q ss_pred chHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcc--ccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGL--GQH 305 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L--~R~ 305 (417)
+-..|+..|+.+-.+++.+... ...++. .|+.-.+...=..+=...++...+.. ++++|||+.-++ .+.
T Consensus 152 ~l~~l~~~g~~~~i~T~~~~~~~~~~~~~-------~gl~~~f~~~~~~~k~~~~k~~~~~~-~~~~vGD~~nDi~~~~~ 223 (280)
T 3skx_A 152 AISKLKAIGIKCMMLTGDNRFVAKWVAEE-------LGLDDYFAEVLPHEKAEKVKEVQQKY-VTAMVGDGVNDAPALAQ 223 (280)
T ss_dssp HHHHHHHTTCEEEEECSSCHHHHHHHHHH-------HTCSEEECSCCGGGHHHHHHHHHTTS-CEEEEECTTTTHHHHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-------cCChhHhHhcCHHHHHHHHHHHHhcC-CEEEEeCCchhHHHHHh
Confidence 3367888999999999988754 222221 24433321111223345555555544 899999986554 566
Q ss_pred cccccch
Q 014830 306 ADLWVPW 312 (417)
Q Consensus 306 ADl~fSW 312 (417)
|++.+.|
T Consensus 224 Ag~~va~ 230 (280)
T 3skx_A 224 ADVGIAI 230 (280)
T ss_dssp SSEEEEC
T ss_pred CCceEEe
Confidence 7765555
No 385
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=48.05 E-value=70 Score=25.71 Aligned_cols=75 Identities=25% Similarity=0.268 Sum_probs=43.3
Q ss_pred CchHHHHhcceEEEEeCCCchh--------HHHHHHHHHHHhh-hCC--cceEEEE----eCCcc-----hHHHHHHHHH
Q 014830 228 GLGSELRRAGVFVKTVRDKPQA--------ADWALKRQMQHSM-SSG--VDWMFLV----SDDND-----FKEMLRKARD 287 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqA--------AD~ALkrhm~~~m-~rg--v~cLvLV----SDDsd-----F~~~Lr~AR~ 287 (417)
.+-.+|++.|+.+-.+++.|.. .=.++..++...+ ..| ++.++.. +++.. -..+.+.+++
T Consensus 34 ~~l~~L~~~g~~~~i~Tn~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~KP~~~~~~~~~~~ 113 (179)
T 3l8h_A 34 QAIARLTQADWTVVLATNQSGLARGLFDTATLNAIHDKMHRALAQMGGVVDAIFMCPHGPDDGCACRKPLPGMYRDIARR 113 (179)
T ss_dssp HHHHHHHHTTCEEEEEEECTTTTTTSSCHHHHHHHHHHHHHHHHHTTCCCCEEEEECCCTTSCCSSSTTSSHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEEECCCccccCcCCHHHHHHHHHHHHHHHHhCCCceeEEEEcCCCCCCCCCCCCCCHHHHHHHHHH
Confidence 3456788999999999888851 1011223333333 356 6655432 34432 2345556667
Q ss_pred cCC---cEEEEcCCCCcc
Q 014830 288 ANL---GTVVVGDSNRGL 302 (417)
Q Consensus 288 ~~v---~TVVVGd~~~~L 302 (417)
.|+ .+++|||+..++
T Consensus 114 ~~~~~~~~~~vGD~~~Di 131 (179)
T 3l8h_A 114 YDVDLAGVPAVGDSLRDL 131 (179)
T ss_dssp HTCCCTTCEEEESSHHHH
T ss_pred cCCCHHHEEEECCCHHHH
Confidence 776 479999975433
No 386
>2poc_A D-fructose-6- PH, isomerase domain of glutamine-fructose-6-phosphat transaminase (isomerizing); glucosamine-6-phosphate synthase; HET: BG6 UD1; 1.80A {Candida albicans} PDB: 2put_A* 2puv_A* 2puw_A*
Probab=47.53 E-value=13 Score=35.48 Aligned_cols=45 Identities=20% Similarity=0.114 Sum_probs=36.3
Q ss_pred ceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCccccccccccc
Q 014830 267 DWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQHADLWVP 311 (417)
Q Consensus 267 ~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R~ADl~fS 311 (417)
+.+|.+|-+ .+-..+++.||++|.+||.|.+. ++.|.+.||..+.
T Consensus 99 dlvI~iS~SG~T~e~l~a~~~Ak~~Ga~~iaIT~~~~S~La~~ad~~l~ 147 (367)
T 2poc_A 99 DTCVFVSQSGETADSILALQYCLERGALTVGIVNSVGSSMSRQTHCGVH 147 (367)
T ss_dssp EEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESSTTSHHHHHSSEEEE
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECCCCChHHHhCCEEEE
Confidence 566777754 46778889999999999999986 4789999997664
No 387
>2r8e_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; YRBI, divalent metal, HAD superfamily, KDO 8-P, hydrolase; 1.40A {Escherichia coli O6} PDB: 2r8x_A 2r8y_A 2r8z_A 3hyc_A 3i6b_A*
Probab=46.79 E-value=58 Score=27.20 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=45.2
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--c
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL--G 303 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L--~ 303 (417)
+-..|+++|+.+-.+++.+... +..-+.+ .|++-++ -..-+.=..+.+.+++.|+ .+++|||+..++ .
T Consensus 61 ~l~~L~~~g~~v~ivT~~~~~~---~~~~l~~---lgl~~~~-~~~kpk~~~~~~~~~~~g~~~~~~~~iGD~~~Di~~a 133 (188)
T 2r8e_A 61 GIRCALTSDIEVAIITGRKAKL---VEDRCAT---LGITHLY-QGQSNKLIAFSDLLEKLAIAPENVAYVGDDLIDWPVM 133 (188)
T ss_dssp HHHHHHTTTCEEEEECSSCCHH---HHHHHHH---HTCCEEE-CSCSCSHHHHHHHHHHHTCCGGGEEEEESSGGGHHHH
T ss_pred HHHHHHHCCCeEEEEeCCChHH---HHHHHHH---cCCceee-cCCCCCHHHHHHHHHHcCCCHHHEEEECCCHHHHHHH
Confidence 5678999999999999998754 2221211 2444322 1122333334444455575 589999986544 5
Q ss_pred cccccccch
Q 014830 304 QHADLWVPW 312 (417)
Q Consensus 304 R~ADl~fSW 312 (417)
+.|.+.+-|
T Consensus 134 ~~ag~~~~~ 142 (188)
T 2r8e_A 134 EKVGLSVAV 142 (188)
T ss_dssp TTSSEEEEC
T ss_pred HHCCCEEEe
Confidence 666666544
No 388
>2hi0_A Putative phosphoglycolate phosphatase; YP_619066.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.51A {Lactobacillus delbrueckii}
Probab=46.56 E-value=10 Score=32.13 Aligned_cols=68 Identities=21% Similarity=0.251 Sum_probs=38.3
Q ss_pred hHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhC-CcceEEEEeCCc-----chHHHHHHHHHcCCc---EEEEcCCCC
Q 014830 230 GSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSS-GVDWMFLVSDDN-----DFKEMLRKARDANLG---TVVVGDSNR 300 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~r-gv~cLvLVSDDs-----dF~~~Lr~AR~~~v~---TVVVGd~~~ 300 (417)
-..|+..|+.+-.+++++... +...+.+. .. -.+. +..|++. +=..+++.+++.|+. +++|||+..
T Consensus 119 l~~l~~~g~~~~i~t~~~~~~---~~~~l~~~-~l~~f~~-~~~~~~~~~~Kp~p~~~~~~~~~l~~~~~~~~~vGDs~~ 193 (240)
T 2hi0_A 119 MKNLRQKGVKLAVVSNKPNEA---VQVLVEEL-FPGSFDF-ALGEKSGIRRKPAPDMTSECVKVLGVPRDKCVYIGDSEI 193 (240)
T ss_dssp HHHHHHTTCEEEEEEEEEHHH---HHHHHHHH-STTTCSE-EEEECTTSCCTTSSHHHHHHHHHHTCCGGGEEEEESSHH
T ss_pred HHHHHHCCCEEEEEeCCCHHH---HHHHHHHc-CCcceeE-EEecCCCCCCCCCHHHHHHHHHHcCCCHHHeEEEcCCHH
Confidence 355788898888888877632 22222221 11 2343 3334442 224456677777774 799999754
Q ss_pred cc
Q 014830 301 GL 302 (417)
Q Consensus 301 ~L 302 (417)
++
T Consensus 194 Di 195 (240)
T 2hi0_A 194 DI 195 (240)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 389
>1tq8_A Hypothetical protein RV1636; MTCY01B2.28, structural target, NYSGXRC, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} SCOP: c.26.2.4
Probab=46.51 E-value=64 Score=26.39 Aligned_cols=66 Identities=11% Similarity=0.070 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHhhhCCcc-eE-EEEeCCcchHHHHHHHHHcCCcEEEEcCCCCccccccccccchhhhhcCcccccc
Q 014830 249 AADWALKRQMQHSMSSGVD-WM-FLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVPWIEVENGELTERD 324 (417)
Q Consensus 249 AAD~ALkrhm~~~m~rgv~-cL-vLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fSW~eV~~Gk~~~~~ 324 (417)
.+...|..-...+-..|+. +- .++.+ .--..+++.|++.+..-||+|...+. .|.....|++.++-
T Consensus 78 ~~~~~l~~~~~~~~~~gv~~v~~~v~~G-~~~~~I~~~a~~~~~DLIV~G~~g~~---------~~~~~~lGSva~~v 145 (163)
T 1tq8_A 78 PIYEILHDAKERAHNAGAKNVEERPIVG-APVDALVNLADEEKADLLVVGNVGLS---------TIAGRLLGSVPANV 145 (163)
T ss_dssp THHHHHHHHHHHHHTTTCCEEEEEEECS-SHHHHHHHHHHHTTCSEEEEECCCCC---------SHHHHHTBBHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEecC-CHHHHHHHHHHhcCCCEEEECCCCCC---------cccceeeccHHHHH
Confidence 3444555544444456766 33 23344 44778899999999999999986421 24455556665443
No 390
>3fj1_A Putative phosphosugar isomerase; YP_167080.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.75A {Silicibacter pomeroyi dss-3}
Probab=46.31 E-value=16 Score=34.81 Aligned_cols=73 Identities=15% Similarity=0.055 Sum_probs=48.4
Q ss_pred HHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhhCC-cceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCC-CCcccc
Q 014830 231 SELRR-AGVFVKTVRDKPQAADWALKRQMQHSMSSG-VDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDS-NRGLGQ 304 (417)
Q Consensus 231 ~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~rg-v~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~-~~~L~R 304 (417)
..|.| .|+.|..+.+ ..+. +. .....+ -+.+|.+|-+ .+-..+++.|+++|.+||.|.+. ++.|.+
T Consensus 63 ~~l~~~~g~~~~~~~~-~~~~------~~-~~~~~~~~dlvI~iS~SG~T~e~l~a~~~ak~~Ga~~iaIT~~~~S~La~ 134 (344)
T 3fj1_A 63 YAAELLLGLPVASLGP-SVAS------VY-DARLRLDRALCLAVSQSGKSPDIVAMTRNAGRDGALCVALTNDAASPLAG 134 (344)
T ss_dssp HHHHHHHCCCEEECCT-HHHH------TT-CCCCCCTTEEEEEEESSSCCHHHHHHHHHHHHTTCEEEEEESCTTSHHHH
T ss_pred HHHHHHhCCcEEEecc-hHHh------hh-cccCCCCCcEEEEEcCCCCCHHHHHHHHHHHHCCCcEEEEECCCCChHHH
Confidence 45666 7888886621 1111 11 111223 3455677654 57778899999999999999875 578999
Q ss_pred ccccccc
Q 014830 305 HADLWVP 311 (417)
Q Consensus 305 ~ADl~fS 311 (417)
.||..+.
T Consensus 135 ~ad~~l~ 141 (344)
T 3fj1_A 135 VSAHTID 141 (344)
T ss_dssp TSSEEEE
T ss_pred hcCEeee
Confidence 9998764
No 391
>2qu7_A Putative transcriptional regulator; structural genomics, PSI-2, protein structure initiative; 2.30A {Staphylococcus saprophyticus subsp}
Probab=46.29 E-value=12 Score=32.53 Aligned_cols=66 Identities=14% Similarity=0.219 Sum_probs=42.7
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+.......++. .....+..++.++++-||+.+-+.+- ..++.+ .++..|+++..
T Consensus 28 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI~~~~~~~~-~~~~~l--~~iPvV~~~~~ 93 (288)
T 2qu7_A 28 EISHECQKHHLHVAVASSEENED--KQQDLIETFVSQNVSAIILVPVKSKF-QMKREW--LKIPIMTLDRE 93 (288)
T ss_dssp HHHHHHGGGTCEEEEEECTTCHH--HHHHHHHHHHHTTEEEEEECCSSSCC-CCCGGG--GGSCEEEESCC
T ss_pred HHHHHHHHCCCEEEEEeCCCCHH--HHHHHHHHHHHcCccEEEEecCCCCh-HHHHHh--cCCCEEEEecc
Confidence 56677888888887764433322 12344555678999999998654321 334444 78888998764
No 392
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=46.28 E-value=32 Score=25.94 Aligned_cols=48 Identities=23% Similarity=0.196 Sum_probs=30.3
Q ss_pred CCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 245 DKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 245 dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.||... .-+++...++...+.++.|-|.. .+ +..|++.|+++|.|..+
T Consensus 73 ~Kp~~~---~~~~~~~~~~~~~~~~~~vgD~~--~d-i~~a~~~G~~~i~~~~~ 120 (137)
T 2pr7_A 73 EKPEEA---AFQAAADAIDLPMRDCVLVDDSI--LN-VRGAVEAGLVGVYYQQF 120 (137)
T ss_dssp CTTSHH---HHHHHHHHTTCCGGGEEEEESCH--HH-HHHHHHHTCEEEECSCH
T ss_pred CCCCHH---HHHHHHHHcCCCcccEEEEcCCH--HH-HHHHHHCCCEEEEeCCh
Confidence 456543 22333333444455666777765 35 88999999999988763
No 393
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4
Probab=46.25 E-value=11 Score=31.48 Aligned_cols=27 Identities=19% Similarity=0.377 Sum_probs=23.0
Q ss_pred CCeecccCCCCCCChHHHHHHHH-Hhhh
Q 014830 155 DPYICGVCGRKCKTNLDLKKHFK-QLHE 181 (417)
Q Consensus 155 ~PY~C~VCGRkf~T~~kL~kHFK-QLHE 181 (417)
.|+.|.+|.-.|.+...+..|.+ ..|.
T Consensus 31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~ 58 (127)
T 1zu1_A 31 SDTQCKVCSAVLISESQKLAHYQSRKHA 58 (127)
T ss_dssp CSSEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred CCCcCcCCCCEeCCHHHHHHHHCcHHHH
Confidence 46999999999999999999996 3354
No 394
>2ah5_A COG0546: predicted phosphatases; MCSG, structural genomics, hydrola haloacid dehalogenase-like, PSI; 1.74A {Streptococcus pneumoniae} SCOP: c.108.1.6
Probab=46.17 E-value=17 Score=30.25 Aligned_cols=65 Identities=15% Similarity=0.135 Sum_probs=32.4
Q ss_pred HHHHhcceEEEEeCCCchh-HHHHHHHHHHHhhhCCcceEEEEeC---CcchHHHHHHHHHcCCc---EEEEcCCCC
Q 014830 231 SELRRAGVFVKTVRDKPQA-ADWALKRQMQHSMSSGVDWMFLVSD---DNDFKEMLRKARDANLG---TVVVGDSNR 300 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqA-AD~ALkrhm~~~m~rgv~cLvLVSD---DsdF~~~Lr~AR~~~v~---TVVVGd~~~ 300 (417)
..|+. |+.+-.+++++.. +...|+.. . +..-.+. ++.|| -++=..+++.+++.|+. +++|||+..
T Consensus 94 ~~L~~-~~~l~i~T~~~~~~~~~~l~~~--g-l~~~f~~-i~~~~~~~Kp~p~~~~~~~~~lg~~p~~~~~vgDs~~ 165 (210)
T 2ah5_A 94 EELSS-SYPLYITTTKDTSTAQDMAKNL--E-IHHFFDG-IYGSSPEAPHKADVIHQALQTHQLAPEQAIIIGDTKF 165 (210)
T ss_dssp HHHHT-TSCEEEEEEEEHHHHHHHHHHT--T-CGGGCSE-EEEECSSCCSHHHHHHHHHHHTTCCGGGEEEEESSHH
T ss_pred HHHHc-CCeEEEEeCCCHHHHHHHHHhc--C-chhheee-eecCCCCCCCChHHHHHHHHHcCCCcccEEEECCCHH
Confidence 44666 7777777777653 22222210 0 0001232 33444 23334555666666764 688888653
No 395
>3nvb_A Uncharacterized protein; protein FKBH, protein fkbhstructural genomics, PSI-2, protei structure initiative; 1.71A {Bacteroides fragilis} PDB: 3slr_A
Probab=46.07 E-value=54 Score=32.62 Aligned_cols=65 Identities=12% Similarity=0.237 Sum_probs=44.5
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHH-----hhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCC
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQH-----SMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSN 299 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~-----~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~ 299 (417)
..|+++|+.+-.++.++... ++..+++ .-..++..++ +.-...=..+++.+++.|+ .+++|||+.
T Consensus 266 ~~Lk~~Gi~laI~Snn~~~~---v~~~l~~~~~~~l~l~~~~~v~-~~~KPKp~~l~~al~~Lgl~pee~v~VGDs~ 338 (387)
T 3nvb_A 266 KKLKNRGIIIAVCSKNNEGK---AKEPFERNPEMVLKLDDIAVFV-ANWENKADNIRTIQRTLNIGFDSMVFLDDNP 338 (387)
T ss_dssp HHHHHTTCEEEEEEESCHHH---HHHHHHHCTTCSSCGGGCSEEE-EESSCHHHHHHHHHHHHTCCGGGEEEECSCH
T ss_pred HHHHHCCCEEEEEcCCCHHH---HHHHHhhccccccCccCccEEE-eCCCCcHHHHHHHHHHhCcCcccEEEECCCH
Confidence 68999999999999999754 3443433 1113444433 3445555667778888898 579999964
No 396
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=45.88 E-value=20 Score=28.64 Aligned_cols=11 Identities=45% Similarity=0.902 Sum_probs=9.0
Q ss_pred eecccCCCCCC
Q 014830 157 YICGVCGRKCK 167 (417)
Q Consensus 157 Y~C~VCGRkf~ 167 (417)
=.|||||....
T Consensus 48 ~~CPvCgs~l~ 58 (112)
T 1l8d_A 48 GKCPVCGRELT 58 (112)
T ss_dssp EECTTTCCEEC
T ss_pred CCCCCCCCcCC
Confidence 36999999766
No 397
>2jvm_A Uncharacterized protein; alpha+beta, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodobacter sphaeroides 2}
Probab=45.22 E-value=5.6 Score=32.45 Aligned_cols=18 Identities=22% Similarity=0.379 Sum_probs=14.4
Q ss_pred CCCeecccCCCCCCChHH
Q 014830 154 NDPYICGVCGRKCKTNLD 171 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~k 171 (417)
+.+..|++||.+|.-...
T Consensus 51 ~g~~~CpYCg~~f~l~~~ 68 (80)
T 2jvm_A 51 TGFVECGYCDRRYIHESF 68 (80)
T ss_dssp TCEEECSSSSCEEEEHHH
T ss_pred CCeEECCCCCCEEEecCC
Confidence 478899999999975543
No 398
>2pr7_A Haloacid dehalogenase/epoxide hydrolase family; NP_599989.1, uncharacterized protein, structural genomics; 1.44A {Corynebacterium glutamicum atcc 13032}
Probab=45.14 E-value=76 Score=23.77 Aligned_cols=67 Identities=19% Similarity=0.185 Sum_probs=39.0
Q ss_pred hHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCc-----chHHHHHHHHHcCC---cEEEEcCCCC
Q 014830 230 GSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDN-----DFKEMLRKARDANL---GTVVVGDSNR 300 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDs-----dF~~~Lr~AR~~~v---~TVVVGd~~~ 300 (417)
-..|++.|+.+-.+++.+... ...|++.= +..-.+. ++.|++. +=.-+.+.+++.|+ ++++|||+..
T Consensus 27 l~~L~~~G~~~~i~S~~~~~~~~~~l~~~~---l~~~f~~-i~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~vgD~~~ 102 (137)
T 2pr7_A 27 LAAAKKNGVGTVILSNDPGGLGAAPIRELE---TNGVVDK-VLLSGELGVEKPEEAAFQAAADAIDLPMRDCVLVDDSIL 102 (137)
T ss_dssp HHHHHHTTCEEEEEECSCCGGGGHHHHHHH---HTTSSSE-EEEHHHHSCCTTSHHHHHHHHHHTTCCGGGEEEEESCHH
T ss_pred HHHHHHCCCEEEEEeCCCHHHHHHHHHHCC---hHhhccE-EEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEEcCCHH
Confidence 356889999999999988753 33333210 1112333 3344322 22334445667777 4899999753
No 399
>3n28_A Phosphoserine phosphatase; HAD family hydrolase, structural genomics, PSI, protein STRU initiative, nysgrc; 2.30A {Vibrio cholerae}
Probab=45.07 E-value=42 Score=30.60 Aligned_cols=89 Identities=26% Similarity=0.191 Sum_probs=53.6
Q ss_pred HhhcCCCCC-CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceE---EE----------EeCC-----cch
Q 014830 218 RSLLKPKVG-YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWM---FL----------VSDD-----NDF 278 (417)
Q Consensus 218 revL~PKvG-YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cL---vL----------VSDD-----sdF 278 (417)
.+-+.|.-| -.+-.+|+.+|+.+-.+++.+...=.++.++ .|++.+ +| ++++ +.=
T Consensus 174 ~~~~~~~pg~~~~l~~L~~~g~~~~ivS~~~~~~~~~~~~~------lgl~~~~~~~l~~~d~~~tg~~~~~~~~~kpk~ 247 (335)
T 3n28_A 174 RETLPLMPELPELVATLHAFGWKVAIASGGFTYFSDYLKEQ------LSLDYAQSNTLEIVSGKLTGQVLGEVVSAQTKA 247 (335)
T ss_dssp HTTCCCCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH------HTCSEEEEEEEEEETTEEEEEEESCCCCHHHHH
T ss_pred HHhCCcCcCHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHH------cCCCeEEeeeeEeeCCeeeeeecccccChhhhH
Confidence 333444444 4466788999999999998876432233222 232211 11 2222 344
Q ss_pred HHHHHHHHHcCC---cEEEEcCCCCcc--ccccccccch
Q 014830 279 KEMLRKARDANL---GTVVVGDSNRGL--GQHADLWVPW 312 (417)
Q Consensus 279 ~~~Lr~AR~~~v---~TVVVGd~~~~L--~R~ADl~fSW 312 (417)
..+.+.+++.|+ .+++|||+..++ .+.|++.+-|
T Consensus 248 ~~~~~~~~~lgi~~~~~v~vGDs~nDi~~a~~aG~~va~ 286 (335)
T 3n28_A 248 DILLTLAQQYDVEIHNTVAVGDGANDLVMMAAAGLGVAY 286 (335)
T ss_dssp HHHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHHcCCChhhEEEEeCCHHHHHHHHHCCCeEEe
Confidence 456677788887 689999987655 5667776655
No 400
>2pib_A Phosphorylated carbohydrates phosphatase TM_1254; 3D-structure, structural genomics, NPPSFA; HET: MSE GOL; 1.73A {Thermotoga maritima MSB8} PDB: 3kbb_A*
Probab=44.96 E-value=21 Score=28.37 Aligned_cols=22 Identities=9% Similarity=0.046 Sum_probs=14.8
Q ss_pred CchHHHHhcceEEEEeCCCchh
Q 014830 228 GLGSELRRAGVFVKTVRDKPQA 249 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqA 249 (417)
.+-..|++.|+.+-.+++.+..
T Consensus 91 ~~l~~l~~~g~~~~i~s~~~~~ 112 (216)
T 2pib_A 91 EALEFVKSKRIKLALATSTPQR 112 (216)
T ss_dssp HHHHHHHHTTCEEEEECSSCHH
T ss_pred HHHHHHHHCCCCEEEEeCCcHH
Confidence 4456677777777777777653
No 401
>3p96_A Phosphoserine phosphatase SERB; ssgcid, structural genomics, structural genomics center for infectious disease, hydrolas; 2.05A {Mycobacterium avium}
Probab=44.35 E-value=56 Score=30.91 Aligned_cols=86 Identities=22% Similarity=0.185 Sum_probs=53.1
Q ss_pred hcCCCCC-CCchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEE---E----------EeCC-----cchH
Q 014830 220 LLKPKVG-YGLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMF---L----------VSDD-----NDFK 279 (417)
Q Consensus 220 vL~PKvG-YGLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLv---L----------VSDD-----sdF~ 279 (417)
-++|.-| -.+-..||+.|+.+-.+++.+... ...+++ .|++.++ | ++++ ..-.
T Consensus 254 ~~~~~pg~~e~l~~Lk~~G~~~~ivS~~~~~~~~~~~~~-------lgl~~~~~~~l~~~dg~~tg~~~~~v~~~kpk~~ 326 (415)
T 3p96_A 254 QLELMPGARTTLRTLRRLGYACGVVSGGFRRIIEPLAEE-------LMLDYVAANELEIVDGTLTGRVVGPIIDRAGKAT 326 (415)
T ss_dssp HCCBCTTHHHHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-------TTCSEEEEECEEEETTEEEEEECSSCCCHHHHHH
T ss_pred hCccCccHHHHHHHHHHCCCEEEEEcCCcHHHHHHHHHH-------cCccceeeeeEEEeCCEEEeeEccCCCCCcchHH
Confidence 3455445 567788999999999999987643 222222 3554332 1 2222 2334
Q ss_pred HHHHHHHHcCC---cEEEEcCCCCcc--ccccccccch
Q 014830 280 EMLRKARDANL---GTVVVGDSNRGL--GQHADLWVPW 312 (417)
Q Consensus 280 ~~Lr~AR~~~v---~TVVVGd~~~~L--~R~ADl~fSW 312 (417)
.+.+.+.+.|+ .+++|||+..++ .+.|.+.+-|
T Consensus 327 ~~~~~~~~~gi~~~~~i~vGD~~~Di~~a~~aG~~va~ 364 (415)
T 3p96_A 327 ALREFAQRAGVPMAQTVAVGDGANDIDMLAAAGLGIAF 364 (415)
T ss_dssp HHHHHHHHHTCCGGGEEEEECSGGGHHHHHHSSEEEEE
T ss_pred HHHHHHHHcCcChhhEEEEECCHHHHHHHHHCCCeEEE
Confidence 45556677776 689999987655 5666666655
No 402
>3m1y_A Phosphoserine phosphatase (SERB); NYSGXRC, PSI II, phophoserine phosphatase, protein structure initiative, structural genomics; 2.40A {Helicobacter pylori} SCOP: c.108.1.0
Probab=44.33 E-value=67 Score=25.97 Aligned_cols=83 Identities=25% Similarity=0.179 Sum_probs=47.5
Q ss_pred cCCCCC-CCchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcce---EEE----------EeC-----CcchHH
Q 014830 221 LKPKVG-YGLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDW---MFL----------VSD-----DNDFKE 280 (417)
Q Consensus 221 L~PKvG-YGLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~c---LvL----------VSD-----DsdF~~ 280 (417)
+.|.-| -.+-..|++.|+.+-.+++.+... ...++. .|++. .++ +|+ -+.-..
T Consensus 74 ~~~~~~~~~~l~~l~~~g~~~~i~S~~~~~~~~~~l~~-------~gl~~~f~~~~~~~~~~~~~~~~~~~~~~k~k~~~ 146 (217)
T 3m1y_A 74 LPLFEGALELVSALKEKNYKVVCFSGGFDLATNHYRDL-------LHLDAAFSNTLIVENDALNGLVTGHMMFSHSKGEM 146 (217)
T ss_dssp CCBCBTHHHHHHHHHTTTEEEEEEEEEEHHHHHHHHHH-------HTCSEEEEEEEEEETTEEEEEEEESCCSTTHHHHH
T ss_pred CcCCCCHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHH-------cCcchhccceeEEeCCEEEeeeccCCCCCCChHHH
Confidence 344444 455678899999999999887643 222222 13332 233 222 233344
Q ss_pred HHHHHHHcCC---cEEEEcCCCCcc--cccccccc
Q 014830 281 MLRKARDANL---GTVVVGDSNRGL--GQHADLWV 310 (417)
Q Consensus 281 ~Lr~AR~~~v---~TVVVGd~~~~L--~R~ADl~f 310 (417)
+.+.+++.|+ .+++|||+..++ .+.|.+.+
T Consensus 147 ~~~~~~~~g~~~~~~i~vGDs~~Di~~a~~aG~~~ 181 (217)
T 3m1y_A 147 LLVLQRLLNISKTNTLVVGDGANDLSMFKHAHIKI 181 (217)
T ss_dssp HHHHHHHHTCCSTTEEEEECSGGGHHHHTTCSEEE
T ss_pred HHHHHHHcCCCHhHEEEEeCCHHHHHHHHHCCCeE
Confidence 4555666676 589999987655 45555544
No 403
>4gpa_A Glutamate receptor 4; PBP fold, ligand-gated ION channel, ION transport, transmembrane AMPA receptor regulating proteins, cornichons, ckamp44; HET: NAG; 2.25A {Rattus norvegicus}
Probab=44.27 E-value=27 Score=31.09 Aligned_cols=61 Identities=7% Similarity=0.074 Sum_probs=45.2
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT 292 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T 292 (417)
.++++.|+.|.... .....+.-....+..+...+++.+||.+...+...+|+.|++.|+.+
T Consensus 151 ~~~~~~g~~v~~~~-~~~~~~~d~~~~l~~i~~~~~~vIv~~~~~~~~~~il~~a~~~g~~~ 211 (389)
T 4gpa_A 151 EKAGQNGWHVSAIC-VENFNDVSYRQLLEELDRRQEKKFVIDCEIERLQNILEQIVSVGKHV 211 (389)
T ss_dssp HHHHTTTCEEEEEE-CTTCCHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHHHHHHHHTCSB
T ss_pred HHHHhcCceEEEEe-ecCCcchhHHHHHHHhhccCCcEEEEEechhHHHHHHHHHHHhCCCC
Confidence 35666777776543 22333334566666677889999999999999999999999999754
No 404
>2fi1_A Hydrolase, haloacid dehalogenase-like family; structural genomics, haloacid dehalogenase-like F PSI, protein structure initiative; 1.40A {Streptococcus pneumoniae} SCOP: c.108.1.3
Probab=44.21 E-value=88 Score=24.68 Aligned_cols=65 Identities=15% Similarity=0.154 Sum_probs=35.0
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcc---eEEEEeCCc-----chHHHHHHHHHcCC-cEEEEcCCC
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVD---WMFLVSDDN-----DFKEMLRKARDANL-GTVVVGDSN 299 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~---cLvLVSDDs-----dF~~~Lr~AR~~~v-~TVVVGd~~ 299 (417)
+-..|++.|+.+-.+++.+..+...|++ .|+. ..++.|++. +-..+.+.+++.|+ .+++|||+.
T Consensus 90 ~l~~l~~~g~~~~i~t~~~~~~~~~l~~-------~~~~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~iGD~~ 162 (190)
T 2fi1_A 90 LLEDISNQGGRHFLVSHRNDQVLEILEK-------TSIAAYFTEVVTSSSGFKRKPNPESMLYLREKYQISSGLVIGDRP 162 (190)
T ss_dssp HHHHHHHTTCEEEEECSSCTHHHHHHHH-------TTCGGGEEEEECGGGCCCCTTSCHHHHHHHHHTTCSSEEEEESSH
T ss_pred HHHHHHHCCCcEEEEECCcHHHHHHHHH-------cCCHhheeeeeeccccCCCCCCHHHHHHHHHHcCCCeEEEEcCCH
Confidence 3446677788887777776544433332 1221 112333321 23445556666666 578888865
Q ss_pred C
Q 014830 300 R 300 (417)
Q Consensus 300 ~ 300 (417)
.
T Consensus 163 ~ 163 (190)
T 2fi1_A 163 I 163 (190)
T ss_dssp H
T ss_pred H
Confidence 3
No 405
>1l7m_A Phosphoserine phosphatase; rossmann fold, four-helix bundle, B-hairpin, structural genomics, BSGC structure funded by NIH; 1.48A {Methanocaldococcus jannaschii} SCOP: c.108.1.4 PDB: 1f5s_A 1l7n_A 1l7p_A* 1l7o_A* 1j97_A*
Probab=43.58 E-value=32 Score=27.45 Aligned_cols=75 Identities=24% Similarity=0.323 Sum_probs=44.6
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcce----EEEEeC--------------CcchHHHHHHHHHcC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDW----MFLVSD--------------DNDFKEMLRKARDAN 289 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~c----LvLVSD--------------DsdF~~~Lr~AR~~~ 289 (417)
.+-..|+..|+.+-.+++++... ....+.. .|++. .+.+.+ -+.-..+++.+++.|
T Consensus 83 ~~l~~l~~~g~~~~i~T~~~~~~---~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~K~~~l~~~~~~lg 156 (211)
T 1l7m_A 83 ETIKELKNRGYVVAVVSGGFDIA---VNKIKEK---LGLDYAFANRLIVKDGKLTGDVEGEVLKENAKGEILEKIAKIEG 156 (211)
T ss_dssp HHHHHHHHTTEEEEEEEEEEHHH---HHHHHHH---HTCSEEEEEEEEEETTEEEEEEECSSCSTTHHHHHHHHHHHHHT
T ss_pred HHHHHHHHCCCEEEEEcCCcHHH---HHHHHHH---cCCCeEEEeeeEEECCEEcCCcccCccCCccHHHHHHHHHHHcC
Confidence 34457788999999998887643 1111111 23222 222222 123456777888888
Q ss_pred Cc---EEEEcCCCCcc--cccccc
Q 014830 290 LG---TVVVGDSNRGL--GQHADL 308 (417)
Q Consensus 290 v~---TVVVGd~~~~L--~R~ADl 308 (417)
+. +++|||+..++ .+.|.+
T Consensus 157 i~~~~~~~iGD~~~Di~~~~~ag~ 180 (211)
T 1l7m_A 157 INLEDTVAVGDGANDISMFKKAGL 180 (211)
T ss_dssp CCGGGEEEEECSGGGHHHHHHCSE
T ss_pred CCHHHEEEEecChhHHHHHHHCCC
Confidence 75 89999987655 444554
No 406
>1mjh_A Protein (ATP-binding domain of protein MJ0577); hypothetical protein, structural genomics, functional assignment; HET: ATP; 1.70A {Methanocaldococcus jannaschii} SCOP: c.26.2.4
Probab=43.46 E-value=82 Score=24.94 Aligned_cols=37 Identities=14% Similarity=0.278 Sum_probs=25.9
Q ss_pred hCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 263 SSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 263 ~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
..|+.+-+.|-...--..+++.|++.+..-||+|...
T Consensus 94 ~~g~~~~~~v~~G~~~~~I~~~a~~~~~dlIV~G~~g 130 (162)
T 1mjh_A 94 DVGFKVKDIIVVGIPHEEIVKIAEDEGVDIIIMGSHG 130 (162)
T ss_dssp HTTCEEEEEEEEECHHHHHHHHHHHTTCSEEEEESCC
T ss_pred HcCCceEEEEcCCCHHHHHHHHHHHcCCCEEEEcCCC
Confidence 4565543323333456778999999999999999864
No 407
>3vot_A L-amino acid ligase, BL00235; ATP-grAsp motif, ATP-binding; HET: ADP PG4; 1.80A {Bacillus licheniformis}
Probab=43.44 E-value=21 Score=33.81 Aligned_cols=38 Identities=11% Similarity=0.168 Sum_probs=31.5
Q ss_pred hhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 262 MSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 262 m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
|...-..|++++..+...-+++.|++.|+++|+|-+..
T Consensus 1 M~~~~k~l~Il~~~~~~~~i~~aa~~lG~~vv~v~~~~ 38 (425)
T 3vot_A 1 MTKRNKNLAIICQNKHLPFIFEEAERLGLKVTFFYNSA 38 (425)
T ss_dssp -CCCCCEEEEECCCTTCCHHHHHHHHTTCEEEEEEETT
T ss_pred CCCCCcEEEEECCChhHHHHHHHHHHCCCEEEEEECCC
Confidence 44455678999999999999999999999999996643
No 408
>3a1c_A Probable copper-exporting P-type ATPase A; ATP-binding, cell membrane, copper transport, hydrolase, ION transport, magnesium, membrane; HET: ACP; 1.85A {Archaeoglobus fulgidus} PDB: 3a1d_A* 3a1e_A* 2b8e_A 2voy_J 2voy_I
Probab=43.32 E-value=42 Score=29.95 Aligned_cols=77 Identities=18% Similarity=0.141 Sum_probs=44.4
Q ss_pred CchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcc--cc
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGL--GQ 304 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L--~R 304 (417)
.+-..|+.+|+.+-.+++.+... ...++. .|++..+-..-......+++..... -.+++|||+..++ .+
T Consensus 170 ~~l~~L~~~g~~~~i~T~~~~~~~~~~l~~-------~gl~~~f~~i~~~~K~~~~~~l~~~-~~~~~vGDs~~Di~~a~ 241 (287)
T 3a1c_A 170 PAVQELKRMGIKVGMITGDNWRSAEAISRE-------LNLDLVIAEVLPHQKSEEVKKLQAK-EVVAFVGDGINDAPALA 241 (287)
T ss_dssp HHHHHHHHTTCEEEEECSSCHHHHHHHHHH-------HTCSEEECSCCTTCHHHHHHHHTTT-CCEEEEECTTTCHHHHH
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHH-------hCCceeeeecChHHHHHHHHHHhcC-CeEEEEECCHHHHHHHH
Confidence 34457889999999999998753 333332 2444332111012333344333333 4689999986544 66
Q ss_pred ccccccch
Q 014830 305 HADLWVPW 312 (417)
Q Consensus 305 ~ADl~fSW 312 (417)
.|++.+.|
T Consensus 242 ~ag~~v~~ 249 (287)
T 3a1c_A 242 QADLGIAV 249 (287)
T ss_dssp HSSEEEEE
T ss_pred HCCeeEEe
Confidence 67776555
No 409
>3ij5_A 3-deoxy-D-manno-octulosonate 8-phosphate phosphat; IDP022 hydrolase, lipopolysaccharide biosynthesis, magnesium, STRU genomics; 1.95A {Yersinia pestis}
Probab=43.20 E-value=36 Score=29.92 Aligned_cols=73 Identities=8% Similarity=0.012 Sum_probs=45.4
Q ss_pred chHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--
Q 014830 229 LGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL-- 302 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L-- 302 (417)
+-..|+++|+.+-.++.++... ...++. .|++.++-.. .+.-..+.+.+++.|+ .+++|||+.-++
T Consensus 84 ~L~~L~~~G~~l~I~T~~~~~~~~~~l~~-------lgi~~~f~~~-k~K~~~l~~~~~~lg~~~~~~~~vGDs~nDi~~ 155 (211)
T 3ij5_A 84 GIRCLITSDIDVAIITGRRAKLLEDRANT-------LGITHLYQGQ-SDKLVAYHELLATLQCQPEQVAYIGDDLIDWPV 155 (211)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-------HTCCEEECSC-SSHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCEEEEEeCCCHHHHHHHHHH-------cCCchhhccc-CChHHHHHHHHHHcCcCcceEEEEcCCHHHHHH
Confidence 6789999999999999998743 222222 3555433222 3333444455555554 589999986544
Q ss_pred ccccccc
Q 014830 303 GQHADLW 309 (417)
Q Consensus 303 ~R~ADl~ 309 (417)
.+.|++.
T Consensus 156 ~~~ag~~ 162 (211)
T 3ij5_A 156 MAQVGLS 162 (211)
T ss_dssp HTTSSEE
T ss_pred HHHCCCE
Confidence 5566654
No 410
>3s6j_A Hydrolase, haloacid dehalogenase-like family; structural genomics, PSI-2; 2.20A {Pseudomonas syringae PV}
Probab=43.14 E-value=14 Score=30.06 Aligned_cols=72 Identities=13% Similarity=0.047 Sum_probs=35.8
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcc-----hHHHHHHHHHcCCc---EEEEcCCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDND-----FKEMLRKARDANLG---TVVVGDSN 299 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsd-----F~~~Lr~AR~~~v~---TVVVGd~~ 299 (417)
.+-.+|+..|+.+-.+++.+... +...+...--...-..++.|++.. =..+.+.+++.|+. +++|||+.
T Consensus 98 ~~l~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~ 174 (233)
T 3s6j_A 98 ELLETLDKENLKWCIATSGGIDT---ATINLKALKLDINKINIVTRDDVSYGKPDPDLFLAAAKKIGAPIDECLVIGDAI 174 (233)
T ss_dssp HHHHHHHHTTCCEEEECSSCHHH---HHHHHHTTTCCTTSSCEECGGGSSCCTTSTHHHHHHHHHTTCCGGGEEEEESSH
T ss_pred HHHHHHHHCCCeEEEEeCCchhh---HHHHHHhcchhhhhheeeccccCCCCCCChHHHHHHHHHhCCCHHHEEEEeCCH
Confidence 34466777788888887776532 111111110011112244444433 23445555666653 67888865
Q ss_pred Ccc
Q 014830 300 RGL 302 (417)
Q Consensus 300 ~~L 302 (417)
.++
T Consensus 175 ~Di 177 (233)
T 3s6j_A 175 WDM 177 (233)
T ss_dssp HHH
T ss_pred HhH
Confidence 444
No 411
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=43.09 E-value=43 Score=25.67 Aligned_cols=72 Identities=13% Similarity=0.111 Sum_probs=40.4
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHH-HH-------------HHhhhCCcceEEEEeCCcch-HHHHHHHHHcCC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKR-QM-------------QHSMSSGVDWMFLVSDDNDF-KEMLRKARDANL 290 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkr-hm-------------~~~m~rgv~cLvLVSDDsdF-~~~Lr~AR~~~v 290 (417)
|..++..|.+.|..|..+...|+.++.+... .+ ....-.+++.+++...+... ..+...|+..+.
T Consensus 16 G~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~ 95 (140)
T 1lss_A 16 GYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGI 95 (140)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCchHHHHHHHHHHHcCC
Confidence 3457788999998888886656655433222 10 00112356766665554433 234567777777
Q ss_pred cEEEEcC
Q 014830 291 GTVVVGD 297 (417)
Q Consensus 291 ~TVVVGd 297 (417)
+++|+--
T Consensus 96 ~~ii~~~ 102 (140)
T 1lss_A 96 NKTIARI 102 (140)
T ss_dssp CCEEEEC
T ss_pred CEEEEEe
Confidence 6666533
No 412
>2pke_A Haloacid delahogenase-like family hydrolase; NP_639141.1, ST genomics, joint center for structural genomics, JCSG; 1.81A {Xanthomonas campestris PV}
Probab=43.06 E-value=42 Score=28.23 Aligned_cols=69 Identities=14% Similarity=0.145 Sum_probs=41.6
Q ss_pred chHHHHhcceEEEEeCCCchh-HHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc---EEEEcCCC-Ccc
Q 014830 229 LGSELRRAGVFVKTVRDKPQA-ADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG---TVVVGDSN-RGL 302 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqA-AD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~---TVVVGd~~-~~L 302 (417)
+-..|+ .|+.+-.+++.+.. +...|+.. -+..-.+.+ +.+..++=..+.+.++..|+. +++|||+. .++
T Consensus 120 ~l~~l~-~~~~~~i~t~~~~~~~~~~l~~~---~l~~~f~~i-~~~~kp~~~~~~~~~~~l~~~~~~~i~iGD~~~~Di 193 (251)
T 2pke_A 120 AVAAIA-ADYAVVLITKGDLFHQEQKIEQS---GLSDLFPRI-EVVSEKDPQTYARVLSEFDLPAERFVMIGNSLRSDV 193 (251)
T ss_dssp HHHHHH-TTSEEEEEEESCHHHHHHHHHHH---SGGGTCCCE-EEESCCSHHHHHHHHHHHTCCGGGEEEEESCCCCCC
T ss_pred HHHHHH-CCCEEEEEeCCCHHHHHHHHHHc---CcHHhCcee-eeeCCCCHHHHHHHHHHhCcCchhEEEECCCchhhH
Confidence 445577 88888888887753 22222221 011113333 345566666667777888874 79999987 666
No 413
>2jrr_A Uncharacterized protein; solution structure, SIR90, structural genomics, PSI-2, protein structure initiative; NMR {Silicibacter pomeroyi}
Probab=42.38 E-value=5.3 Score=31.52 Aligned_cols=16 Identities=19% Similarity=0.220 Sum_probs=13.3
Q ss_pred CCCeecccCCCCCCCh
Q 014830 154 NDPYICGVCGRKCKTN 169 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~ 169 (417)
+.+..|++||.+|...
T Consensus 38 ~g~~~CpYCg~~f~l~ 53 (67)
T 2jrr_A 38 TGWVECPYCDCKYVLK 53 (67)
T ss_dssp TSEEEETTTTEEEEET
T ss_pred CCeEECCCCCCEEEEC
Confidence 4789999999998744
No 414
>3ks9_A Mglur1, metabotropic glutamate receptor 1; glutamate receptors, dimerization, glutamic acid BIN structural genomics, structural genomics consortium; HET: Z99 NAG; 1.90A {Homo sapiens} SCOP: c.93.1.1 PDB: 1ewk_A* 1ewt_A* 1ewv_A 1isr_A* 1iss_A* 3lmk_A*
Probab=42.18 E-value=40 Score=32.92 Aligned_cols=67 Identities=7% Similarity=0.158 Sum_probs=44.6
Q ss_pred chHHHHhcceEEEE---eCCCchhHHHHHHHHHHHhhhC--CcceEEEEeCCcchHHHHHHHHHcCCcE--EEEcC
Q 014830 229 LGSELRRAGVFVKT---VRDKPQAADWALKRQMQHSMSS--GVDWMFLVSDDNDFKEMLRKARDANLGT--VVVGD 297 (417)
Q Consensus 229 LA~ELkRAGV~Vrt---V~dKPqAAD~ALkrhm~~~m~r--gv~cLvLVSDDsdF~~~Lr~AR~~~v~T--VVVGd 297 (417)
+..++++.|+-|-. ++..+...| ....+..+... .+..+|+..+..+...+++.+++.|+.. +.||.
T Consensus 217 ~~~~~~~~Gi~v~~~~~i~~~~~~~d--~~~~l~~i~~~~~~a~vii~~~~~~~~~~l~~~~~~~g~~~k~~~i~s 290 (496)
T 3ks9_A 217 FKELAAQEGLSIAHSDKIYSNAGEKS--FDRLLRKLRERLPKARVVVCFCEGMTVRGLLSAMRRLGVVGEFSLIGS 290 (496)
T ss_dssp HHHHHHHTTCEEEEEEEECTTCCHHH--HHHHHHHHHTTTTTTCEEEEECCHHHHHHHHHHHHHHTCCSCCEEEEC
T ss_pred HHHHHHHcCceEEEEEEECCCCCHHH--HHHHHHHHHhccCceEEEEEecChHHHHHHHHHHHHhCCCCcEEEEEe
Confidence 45678888987763 433333333 34445555553 6777777788788999999999999973 44543
No 415
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=42.06 E-value=30 Score=31.62 Aligned_cols=59 Identities=12% Similarity=0.041 Sum_probs=41.5
Q ss_pred HHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE
Q 014830 232 ELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT 292 (417)
Q Consensus 232 ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T 292 (417)
++++.|..|....=.+...| ....+..+...+++.|++.+...+...+++.|++.|+..
T Consensus 160 ~~~~~g~~v~~~~~~~~~~d--~~~~l~~i~~~~~~vi~~~~~~~~~~~~~~qa~~~gl~~ 218 (395)
T 3h6g_A 160 APSRYNLRLKIRQLPADTKD--AKPLLKEMKRGKEFHVIFDCSHEMAAGILKQALAMGMMT 218 (395)
T ss_dssp GGGTSSCEEEEEECCSSGGG--GHHHHHHHHHTTCCEEEEESCHHHHHHHHHHHHHTTCCS
T ss_pred hhhcCCceEEEEEeCCCchh--HHHHHHHHhhcCCeEEEEECCHHHHHHHHHHHHHccccC
Confidence 44556666654321122233 345555566789999999999999999999999999864
No 416
>3gyb_A Transcriptional regulators (LACI-family transcriptional regulatory protein); protein structure initiative II(PSI II), nysgxrc; 1.60A {Corynebacterium glutamicum}
Probab=41.97 E-value=16 Score=31.46 Aligned_cols=65 Identities=12% Similarity=0.103 Sum_probs=40.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.|+..++++.|+.+...... .... ....++.+.+++++-|| ++.+.. ...+.. .|+..|+++...
T Consensus 25 ~gi~~~a~~~g~~~~~~~~~-~~~~--~~~~~~~l~~~~vdgiI-~~~~~~-~~~~~~---~~iPvV~~~~~~ 89 (280)
T 3gyb_A 25 QSLSDVLTPKGYRLSVIDSL-TSQA--GTDPITSALSMRPDGII-IAQDIP-DFTVPD---SLPPFVIAGTRI 89 (280)
T ss_dssp HHHHHHHGGGTCEEEEECSS-SSCS--SSCHHHHHHTTCCSEEE-EESCC------------CCCEEEESCCC
T ss_pred HHHHHHHHHCCCEEEEEeCC-CchH--HHHHHHHHHhCCCCEEE-ecCCCC-hhhHhh---cCCCEEEECCCC
Confidence 46778899999999877554 2221 12344456789999999 776655 444544 899999998743
No 417
>3mn1_A Probable YRBI family phosphatase; structural genomics, PSI, protein structure initiative, NYSG phosphatase; 1.80A {Pseudomonas syringae PV} PDB: 3nrj_A
Probab=41.94 E-value=36 Score=28.66 Aligned_cols=74 Identities=16% Similarity=0.183 Sum_probs=44.8
Q ss_pred chHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--
Q 014830 229 LGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL-- 302 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L-- 302 (417)
+-..|+++|+.+-.++.++... ...++. .|++-++-.. .+--..+.+.+++.|+ .+++|||+.-++
T Consensus 54 ~l~~L~~~g~~~~i~T~~~~~~~~~~~~~-------lgl~~~f~~~-~~K~~~~~~~~~~~g~~~~~~~~vGD~~nDi~~ 125 (189)
T 3mn1_A 54 GIKMLIASGVTTAIISGRKTAIVERRAKS-------LGIEHLFQGR-EDKLVVLDKLLAELQLGYEQVAYLGDDLPDLPV 125 (189)
T ss_dssp HHHHHHHTTCEEEEECSSCCHHHHHHHHH-------HTCSEEECSC-SCHHHHHHHHHHHHTCCGGGEEEEECSGGGHHH
T ss_pred HHHHHHHCCCEEEEEECcChHHHHHHHHH-------cCCHHHhcCc-CChHHHHHHHHHHcCCChhHEEEECCCHHHHHH
Confidence 6678999999999999998754 222222 3444332211 2222445555666664 489999986544
Q ss_pred cccccccc
Q 014830 303 GQHADLWV 310 (417)
Q Consensus 303 ~R~ADl~f 310 (417)
.+.|++.+
T Consensus 126 ~~~ag~~~ 133 (189)
T 3mn1_A 126 IRRVGLGM 133 (189)
T ss_dssp HHHSSEEE
T ss_pred HHHCCCeE
Confidence 55666554
No 418
>3kzx_A HAD-superfamily hydrolase, subfamily IA, variant; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ehrlich chaffeensis; 1.90A {Ehrlichia chaffeensis}
Probab=41.84 E-value=53 Score=26.94 Aligned_cols=68 Identities=16% Similarity=0.209 Sum_probs=36.3
Q ss_pred CchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcc---eEEEEeCCcc-----hHHHHHHHHHcCC----cEEE
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVD---WMFLVSDDND-----FKEMLRKARDANL----GTVV 294 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~---cLvLVSDDsd-----F~~~Lr~AR~~~v----~TVV 294 (417)
.+-..|+..|+.+-.+++.+... ...|+. .|+. -.++.|++.. =..+.+.+++.|+ .+++
T Consensus 110 ~~l~~l~~~g~~~~i~T~~~~~~~~~~l~~-------~gl~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~lgi~~~~~~v~ 182 (231)
T 3kzx_A 110 ELLDTLKENNITMAIVSNKNGERLRSEIHH-------KNLTHYFDSIIGSGDTGTIKPSPEPVLAALTNINIEPSKEVFF 182 (231)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-------TTCGGGCSEEEEETSSSCCTTSSHHHHHHHHHHTCCCSTTEEE
T ss_pred HHHHHHHHCCCeEEEEECCCHHHHHHHHHH-------CCchhheeeEEcccccCCCCCChHHHHHHHHHcCCCcccCEEE
Confidence 44567777888888887776532 222221 2221 1234444322 2345556666666 5777
Q ss_pred EcCCCCcc
Q 014830 295 VGDSNRGL 302 (417)
Q Consensus 295 VGd~~~~L 302 (417)
|||+..++
T Consensus 183 vGD~~~Di 190 (231)
T 3kzx_A 183 IGDSISDI 190 (231)
T ss_dssp EESSHHHH
T ss_pred EcCCHHHH
Confidence 88865433
No 419
>2gmw_A D,D-heptose 1,7-bisphosphate phosphatase; Zn-binding protein, hydrolase; 1.50A {Escherichia coli} SCOP: c.108.1.19 PDB: 3esq_A 3esr_A 3l1u_A 3l1v_A 3l8e_A 3l8f_A 3l8g_A*
Probab=41.64 E-value=68 Score=27.23 Aligned_cols=17 Identities=24% Similarity=0.470 Sum_probs=11.4
Q ss_pred HHHHhcceEEEEeCCCc
Q 014830 231 SELRRAGVFVKTVRDKP 247 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKP 247 (417)
..|+++|+.+-.+++.+
T Consensus 60 ~~L~~~G~~~~ivTn~~ 76 (211)
T 2gmw_A 60 RELKKMGFALVVVTNQS 76 (211)
T ss_dssp HHHHHTTCEEEEEEECT
T ss_pred HHHHHCCCeEEEEECcC
Confidence 45666677777777666
No 420
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=41.59 E-value=15 Score=31.48 Aligned_cols=29 Identities=21% Similarity=0.260 Sum_probs=26.7
Q ss_pred CCCCeecccCCCCCCChHHHHHHHHHhhh
Q 014830 153 PNDPYICGVCGRKCKTNLDLKKHFKQLHE 181 (417)
Q Consensus 153 p~~PY~C~VCGRkf~T~~kL~kHFKQLHE 181 (417)
.+.|..|=.|-..|.+-..+..|.|+.|.
T Consensus 12 e~~~~~CLFCd~~~~s~~~~l~H~k~~H~ 40 (121)
T 1wir_A 12 GRQHTPCLFCDRLFASAEETFSHCKLEHQ 40 (121)
T ss_dssp CCCCEECSSSCCEESSHHHHHHHHHHSSC
T ss_pred CCCceeEecCCCcccCHHHHHHHHHHhcC
Confidence 45689999999999999999999999986
No 421
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=40.86 E-value=51 Score=29.08 Aligned_cols=70 Identities=16% Similarity=0.163 Sum_probs=48.3
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcCC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGDS 298 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd~ 298 (417)
|..+|..|-+.|..|-.+...+.....++...+. ..|..+.++..|-++...+-+.+.+. ++..||--.+
T Consensus 42 G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~---~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~li~nAg 116 (271)
T 4iin_A 42 GAEIAKTLASMGLKVWINYRSNAEVADALKNELE---EKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLSYLVNNAG 116 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH---HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHH---hcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCEEEECCC
Confidence 5778999999999998876655544444554443 34677788888888877766666543 6777765543
No 422
>3n1u_A Hydrolase, HAD superfamily, subfamily III A; structural genomics, PSI-2; 1.80A {Legionella pneumophila} SCOP: c.108.1.0
Probab=40.60 E-value=46 Score=28.25 Aligned_cols=72 Identities=18% Similarity=0.173 Sum_probs=43.1
Q ss_pred hHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc--c
Q 014830 230 GSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL--G 303 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L--~ 303 (417)
-..|+++|+.+-.+++.+... ...++. .|++-++-.. -+.-..+.+.+++.++ .+++|||+..++ .
T Consensus 55 l~~L~~~g~~~~ivTn~~~~~~~~~l~~-------lgl~~~~~~~-kpk~~~~~~~~~~~~~~~~~~~~vGD~~~Di~~~ 126 (191)
T 3n1u_A 55 LKLLMAAGIQVAIITTAQNAVVDHRMEQ-------LGITHYYKGQ-VDKRSAYQHLKKTLGLNDDEFAYIGDDLPDLPLI 126 (191)
T ss_dssp HHHHHHTTCEEEEECSCCSHHHHHHHHH-------HTCCEEECSC-SSCHHHHHHHHHHHTCCGGGEEEEECSGGGHHHH
T ss_pred HHHHHHCCCeEEEEeCcChHHHHHHHHH-------cCCccceeCC-CChHHHHHHHHHHhCCCHHHEEEECCCHHHHHHH
Confidence 357899999999999988744 222222 3544322111 2334455556666676 589999986555 3
Q ss_pred cccccc
Q 014830 304 QHADLW 309 (417)
Q Consensus 304 R~ADl~ 309 (417)
+.|.+.
T Consensus 127 ~~ag~~ 132 (191)
T 3n1u_A 127 QQVGLG 132 (191)
T ss_dssp HHSSEE
T ss_pred HHCCCE
Confidence 444443
No 423
>3h5t_A Transcriptional regulator, LACI family; DNA-dependent, protein structure initiative II(PSI II), NYSGXRC, 11232D), structural genomics; 2.53A {Corynebacterium glutamicum}
Probab=40.33 E-value=23 Score=32.24 Aligned_cols=71 Identities=13% Similarity=0.066 Sum_probs=44.4
Q ss_pred HHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCccccccccccchhhhhcCcccccccccCCC
Q 014830 256 RQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVPWIEVENGELTERDLVPRTR 330 (417)
Q Consensus 256 rhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fSW~eV~~Gk~~~~~~~~~~~ 330 (417)
..+..+..++++-||+++-.. -...++.+.+.++-.|+|+..... ... -++.-+....|..--+-|....+
T Consensus 119 ~~~~~l~~~~vdGiIi~~~~~-~~~~~~~l~~~~iPvV~i~~~~~~-~~~--~~V~~D~~~~~~~a~~~L~~~G~ 189 (366)
T 3h5t_A 119 SAQQLVNNAAVDGVVIYSVAK-GDPHIDAIRARGLPAVIADQPARE-EGM--PFIAPNNRKAIAPAAQALIDAGH 189 (366)
T ss_dssp HHHHHHHTCCCSCEEEESCCT-TCHHHHHHHHHTCCEEEESSCCSC-TTC--CEEEECHHHHTHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCCEEEEecCCC-ChHHHHHHHHCCCCEEEECCccCC-CCC--CEEEeChHHHHHHHHHHHHHCCC
Confidence 345556789999999986532 236778888899999999863211 111 23444555566555455555443
No 424
>2vpz_A Thiosulfate reductase; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_A* 2vpw_A* 2vpy_A*
Probab=40.29 E-value=31 Score=35.91 Aligned_cols=49 Identities=16% Similarity=0.216 Sum_probs=39.4
Q ss_pred CCcceEEEEeCCc------chHHHHHHHHHcCCcEEEEcCCCCccccccccccch
Q 014830 264 SGVDWMFLVSDDN------DFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVPW 312 (417)
Q Consensus 264 rgv~cLvLVSDDs------dF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fSW 312 (417)
...++||++--+. .+...|+.||++|.+-|||.-......+.||.|++=
T Consensus 198 ~~ad~il~~G~n~~~~~p~~~~~~~~~a~~~G~klividPr~t~ta~~Ad~~l~i 252 (765)
T 2vpz_A 198 ENARYIVLIGHHIGEDTHNTQLQDFALALKNGAKVVVVDPRFSTAAAKAHRWLPI 252 (765)
T ss_dssp GGCSEEEEESCCBTTBCCHHHHHHHHHHHHTTCEEEEECSBCCTTGGGCSEEECC
T ss_pred ccCCEEEEEeCChhhcCChHHHHHHHHHHHCCCEEEEECCCCCcchhhCCeEeCC
Confidence 3478888886552 577788999999999999987666788899999873
No 425
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=40.19 E-value=93 Score=27.02 Aligned_cols=65 Identities=15% Similarity=0.109 Sum_probs=41.3
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC----cchHHHHHHHHHcCCc---EEEEcCC
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD----NDFKEMLRKARDANLG---TVVVGDS 298 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD----sdF~~~Lr~AR~~~v~---TVVVGd~ 298 (417)
++..|+.+|+.|.-. +.....+. +...+ ...+++.|+|-+-. ..+..+++..|+++++ .|+||..
T Consensus 108 va~~l~~~G~~v~~L-G~~vp~~~-l~~~~---~~~~~d~v~lS~~~~~~~~~~~~~i~~l~~~~~~~~~~v~vGG~ 179 (210)
T 1y80_A 108 VAMMLESGGFTVYNL-GVDIEPGK-FVEAV---KKYQPDIVGMSALLTTTMMNMKSTIDALIAAGLRDRVKVIVGGA 179 (210)
T ss_dssp HHHHHHHTTCEEEEC-CSSBCHHH-HHHHH---HHHCCSEEEEECCSGGGTHHHHHHHHHHHHTTCGGGCEEEEEST
T ss_pred HHHHHHHCCCEEEEC-CCCCCHHH-HHHHH---HHcCCCEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEECC
Confidence 577899999999965 33333322 22222 23578877665532 3467788888888863 5777764
No 426
>3jvd_A Transcriptional regulators; structural genomics, PSI-2, sugar binding protein, transcrip regulation, protein structure initiative; 2.30A {Corynebacterium glutamicum}
Probab=40.09 E-value=16 Score=32.96 Aligned_cols=90 Identities=11% Similarity=0.024 Sum_probs=53.7
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcccccc
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQHA 306 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~A 306 (417)
.|+..++++.|+.+....... .. .....+..+..++++.||+.+- +..+++.++-.|+++..... ...
T Consensus 84 ~gi~~~a~~~g~~~~~~~~~~-~~--~~~~~~~~l~~~~vdGiIi~~~-------~~~~~~~~iPvV~~~~~~~~-~~~- 151 (333)
T 3jvd_A 84 QTIQQDLKAAGYQMLVAEANS-VQ--AQDVVMESLISIQAAGIIHVPV-------VGSIAPEGIPMVQLTRGELG-PGF- 151 (333)
T ss_dssp HHHHHHHHHHTCEEEEEECCS-HH--HHHHHHHHHHHHTCSEEEECCC-------TTCCC-CCSCEEEECC-----CCS-
T ss_pred HHHHHHHHHCCCEEEEECCCC-hH--HHHHHHHHHHhCCCCEEEEcch-------HHHHhhCCCCEEEECccCCC-CCC-
Confidence 366778888899888764433 22 2234555667899999999876 66778889999999864311 111
Q ss_pred ccccchhhhhcCcccccccccCC
Q 014830 307 DLWVPWIEVENGELTERDLVPRT 329 (417)
Q Consensus 307 Dl~fSW~eV~~Gk~~~~~~~~~~ 329 (417)
-++.-+....|..--+-|....
T Consensus 152 -~~V~~D~~~~~~~a~~~L~~~G 173 (333)
T 3jvd_A 152 -PRVLCDDEAGFFQLTESVLGGS 173 (333)
T ss_dssp -CEEEECHHHHHHHHHHHHCCSS
T ss_pred -CEEEEChHHHHHHHHHHHHHCC
Confidence 2333444445544444444443
No 427
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=39.59 E-value=19 Score=26.67 Aligned_cols=28 Identities=21% Similarity=0.463 Sum_probs=22.3
Q ss_pred eeccc--CCCCCCChHHHHHHHHHhhhhhH
Q 014830 157 YICGV--CGRKCKTNLDLKKHFKQLHERER 184 (417)
Q Consensus 157 Y~C~V--CGRkf~T~~kL~kHFKQLHERER 184 (417)
+.|.= |++.|.+.+.|++|.-..|.-.+
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~ 31 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHVSQD 31 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSCCCC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhccCcc
Confidence 34544 99999999999999988886443
No 428
>3sd7_A Putative phosphatase; structural genomics, haloacid dehalogenase-like hydrolase, H center for structural genomics of infectious diseases; HET: PGE; 1.70A {Clostridium difficile}
Probab=39.56 E-value=16 Score=30.48 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=35.7
Q ss_pred CchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcc---eEEEEeCCc-----chHHHHHHHHHcCCc----EEE
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVD---WMFLVSDDN-----DFKEMLRKARDANLG----TVV 294 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~---cLvLVSDDs-----dF~~~Lr~AR~~~v~----TVV 294 (417)
.+-..|+..|+.+-.+++.+... ...|+. .|+. ..++.|++. +=..+.+.+++.|+. +++
T Consensus 117 ~~l~~l~~~g~~~~i~s~~~~~~~~~~l~~-------~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~g~~~~~~~i~ 189 (240)
T 3sd7_A 117 EILEMLYKNGKILLVATSKPTVFAETILRY-------FDIDRYFKYIAGSNLDGTRVNKNEVIQYVLDLCNVKDKDKVIM 189 (240)
T ss_dssp HHHHHHHHTTCEEEEEEEEEHHHHHHHHHH-------TTCGGGCSEEEEECTTSCCCCHHHHHHHHHHHHTCCCGGGEEE
T ss_pred HHHHHHHHCCCeEEEEeCCcHHHHHHHHHH-------cCcHhhEEEEEeccccCCCCCCHHHHHHHHHHcCCCCCCcEEE
Confidence 34466777788777777765432 222221 1221 234445543 223344555666664 678
Q ss_pred EcCCCCcc
Q 014830 295 VGDSNRGL 302 (417)
Q Consensus 295 VGd~~~~L 302 (417)
|||+..++
T Consensus 190 vGD~~~Di 197 (240)
T 3sd7_A 190 VGDRKYDI 197 (240)
T ss_dssp EESSHHHH
T ss_pred ECCCHHHH
Confidence 88865444
No 429
>3mc1_A Predicted phosphatase, HAD family; PSI2, NYSGXRC, structural genomics, protein structure initiative; 1.93A {Clostridium acetobutylicum} SCOP: c.108.1.0
Probab=39.55 E-value=19 Score=29.37 Aligned_cols=71 Identities=17% Similarity=0.216 Sum_probs=39.5
Q ss_pred CchHHHHhcceEEEEeCCCchh-HHHHHHHHHHHhhhCCcceEEEEeCCc-----chHHHHHHHHHcCC---cEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQA-ADWALKRQMQHSMSSGVDWMFLVSDDN-----DFKEMLRKARDANL---GTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqA-AD~ALkrhm~~~m~rgv~cLvLVSDDs-----dF~~~Lr~AR~~~v---~TVVVGd~ 298 (417)
.+-..|+..|+.+-.+++.+.. +...|+..- +..-.+ .++.+++. +=..+.+.+++.|+ .+++|||+
T Consensus 93 ~~l~~l~~~g~~~~i~t~~~~~~~~~~l~~~~---l~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~i~iGD~ 168 (226)
T 3mc1_A 93 ALLSSLKDYGFHLVVATSKPTVFSKQILEHFK---LAFYFD-AIVGSSLDGKLSTKEDVIRYAMESLNIKSDDAIMIGDR 168 (226)
T ss_dssp HHHHHHHHHTCEEEEEEEEEHHHHHHHHHHTT---CGGGCS-EEEEECTTSSSCSHHHHHHHHHHHHTCCGGGEEEEESS
T ss_pred HHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhC---CHhhee-eeeccCCCCCCCCCHHHHHHHHHHhCcCcccEEEECCC
Confidence 3456788889888888877653 222222210 011122 23444432 33455666677777 47999997
Q ss_pred CCcc
Q 014830 299 NRGL 302 (417)
Q Consensus 299 ~~~L 302 (417)
..++
T Consensus 169 ~~Di 172 (226)
T 3mc1_A 169 EYDV 172 (226)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 430
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=39.33 E-value=53 Score=32.79 Aligned_cols=92 Identities=18% Similarity=0.186 Sum_probs=52.5
Q ss_pred CCCCCCCch-----HHHHhcce--------EEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc
Q 014830 222 KPKVGYGLG-----SELRRAGV--------FVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA 288 (417)
Q Consensus 222 ~PKvGYGLA-----~ELkRAGV--------~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~ 288 (417)
+|.+|+++. ..|+..|. .|-.++-.+.+...|++ -...+-..|+.+.+-..+ ..+...++.|.+.
T Consensus 333 ~PavGFaig~eRl~~~l~~~~~~~~~~~~~~v~v~~~~~~~~~~a~~-la~~LR~~Gi~ve~~~~~-~slkkq~k~A~k~ 410 (456)
T 3lc0_A 333 IPCAGFGFGDCVIVELLQEKRLLPDIPHVVDDVVIPFDESMRPHALA-VLRRLRDAGRSADIILDK-KKVVQAFNYADRV 410 (456)
T ss_dssp CCEEEEEEESSHHHHHHHHTTCCCCCCCCEEEEEEESSGGGHHHHHH-HHHHHHHTTCCEEECCSC-CCHHHHHHHHHHT
T ss_pred CCEEEEEeEHHHHHHHHHhcCCCCccCCCCcEEEEEcCHHHHHHHHH-HHHHHHHCCCeEEEecCC-CCHHHHHHHHHHc
Confidence 688887754 44555442 12223222333223332 222333578776554443 3499999999999
Q ss_pred CCcEEE-EcCCCCccccccccccchhhhhcCcccccccccCCC
Q 014830 289 NLGTVV-VGDSNRGLGQHADLWVPWIEVENGELTERDLVPRTR 330 (417)
Q Consensus 289 ~v~TVV-VGd~~~~L~R~ADl~fSW~eV~~Gk~~~~~~~~~~~ 330 (417)
|.+-|| ||+ +|+++|.++-+++..+..
T Consensus 411 ga~~vviiGe---------------~E~~~g~v~vK~l~tgeQ 438 (456)
T 3lc0_A 411 GAVRAVLVAP---------------EEWERGEVQVKMLREGTG 438 (456)
T ss_dssp TEEEEEEECH---------------HHHHTTEEEEEECC----
T ss_pred CCCEEEEECC---------------chhcCCeEEEEECCCCCe
Confidence 987754 554 578899999888876543
No 431
>3qek_A NMDA glutamate receptor subunit; amino terminal domain, ION channel, NMDA receptor, allosteri modulation, phenylethanolamine, polyamine; HET: NAG BMA; 2.00A {Xenopus laevis} PDB: 3qel_A* 3qem_A* 3q41_A*
Probab=38.78 E-value=15 Score=33.47 Aligned_cols=43 Identities=9% Similarity=0.100 Sum_probs=34.9
Q ss_pred HHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc---EEEEcC
Q 014830 255 KRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG---TVVVGD 297 (417)
Q Consensus 255 krhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~---TVVVGd 297 (417)
...+..+...+++.+|+.+...+...+++.|++.|+. .+.|+.
T Consensus 205 ~~~l~~i~~~~~~vii~~~~~~~~~~~~~~a~~~g~~~~~~~~i~~ 250 (384)
T 3qek_A 205 TALLLEAKELEARVIILSASEDDATAVYKSAAMLDMTGAGYVWLVG 250 (384)
T ss_dssp HHHHHHHHTSSCCEEEEECCHHHHHHHHHHHHHTTCSSTTCEEECC
T ss_pred HHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHcCCccCCeEEEEe
Confidence 3444556778999999999999999999999999997 555554
No 432
>4g9b_A Beta-PGM, beta-phosphoglucomutase; HAD, putative phosphoglucomutase, enzyme function initiative structural genomics, isomerase; 1.70A {Escherichia coli}
Probab=38.76 E-value=72 Score=27.35 Aligned_cols=35 Identities=9% Similarity=0.118 Sum_probs=22.8
Q ss_pred hhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 262 MSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 262 m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
++..++-.|.|-| +. .+ ++.|+++|++||-|+.+.
T Consensus 162 lg~~p~e~l~VgD-s~-~d-i~aA~~aG~~~I~V~~g~ 196 (243)
T 4g9b_A 162 LGVPPQACIGIED-AQ-AG-IDAINASGMRSVGIGAGL 196 (243)
T ss_dssp HTSCGGGEEEEES-SH-HH-HHHHHHHTCEEEEESTTC
T ss_pred cCCChHHEEEEcC-CH-HH-HHHHHHcCCEEEEECCCC
Confidence 3444444444544 43 44 679999999999998753
No 433
>1byk_A Protein (trehalose operon repressor); LACI family, phosphate binding, protein structure, trehalose repressor, gene regulation; HET: T6P; 2.50A {Escherichia coli} SCOP: c.93.1.1
Probab=38.63 E-value=33 Score=29.05 Aligned_cols=65 Identities=11% Similarity=0.005 Sum_probs=41.8
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC-cchHHHHHHHHHcCCcEEEEcC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD-NDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD-sdF~~~Lr~AR~~~v~TVVVGd 297 (417)
.|+..++++.|+.+.......++.. ....+..+..++++-|++.+-+ .+. ..| ++.++..|+++.
T Consensus 22 ~gi~~~~~~~g~~~~~~~~~~~~~~--~~~~~~~l~~~~vdgiI~~~~~~~~~-~~l---~~~~~pvV~~~~ 87 (255)
T 1byk_A 22 QTMLPAFYEQGYDPIMMESQFSPQL--VAEHLGVLKRRNIDGVVLFGFTGITE-EML---AHWQSSLVLLAR 87 (255)
T ss_dssp HHHHHHHHHHTCEEEEEECTTCHHH--HHHHHHHHHTTTCCEEEEECCTTCCT-TTS---GGGSSSEEEESS
T ss_pred HHHHHHHHHcCCEEEEEeCCCcHHH--HHHHHHHHHhcCCCEEEEecCccccH-HHH---HhcCCCEEEEcc
Confidence 4677888999998877643333321 2334555678999999998743 332 223 356788888875
No 434
>3ed5_A YFNB; APC60080, bacillus subtilis subsp. subtilis STR. 168, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.72A {Bacillus subtilis} PDB: 3i76_A
Probab=38.60 E-value=86 Score=25.43 Aligned_cols=31 Identities=23% Similarity=0.224 Sum_probs=16.9
Q ss_pred EEEeeCCCCCCCC-CchHHHHHHHHHHHHcCcee
Q 014830 82 VVLWDLDNKPPRG-PPYDAAMSLRRVAERFGEVT 114 (417)
Q Consensus 82 ~VlWDLDNKPP~~-pPY~AA~rLr~~As~FG~Vv 114 (417)
.|+||+|.-==.. +. ....++.++..+|.-.
T Consensus 9 ~i~fDlDGTL~d~~~~--~~~~~~~~~~~~g~~~ 40 (238)
T 3ed5_A 9 TLLFDVDDTILDFQAA--EALALRLLFEDQNIPL 40 (238)
T ss_dssp EEEECCBTTTBCHHHH--HHHHHHHHHHHTTCCC
T ss_pred EEEEcCcCcCcCCchh--HHHHHHHHHHHcCCCc
Confidence 5788999652111 22 2234556666677543
No 435
>3s3t_A Nucleotide-binding protein, universal stress PROT family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ATP; 1.90A {Lactobacillus plantarum} SCOP: c.26.2.0
Probab=38.32 E-value=91 Score=24.06 Aligned_cols=46 Identities=9% Similarity=0.169 Sum_probs=29.5
Q ss_pred HHHHHHHhhhCCc-ceEEEEeCCcchHHHHH-HHHHcCCcEEEEcCCC
Q 014830 254 LKRQMQHSMSSGV-DWMFLVSDDNDFKEMLR-KARDANLGTVVVGDSN 299 (417)
Q Consensus 254 Lkrhm~~~m~rgv-~cLvLVSDDsdF~~~Lr-~AR~~~v~TVVVGd~~ 299 (417)
|..-...+...|+ .+-..|....--..+++ .|++.+..-||+|...
T Consensus 71 l~~~~~~~~~~g~~~~~~~~~~g~~~~~I~~~~a~~~~~dliV~G~~~ 118 (146)
T 3s3t_A 71 MRQRQQFVATTSAPNLKTEISYGIPKHTIEDYAKQHPEIDLIVLGATG 118 (146)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEECHHHHHHHHHHHSTTCCEEEEESCC
T ss_pred HHHHHHHHHhcCCcceEEEEecCChHHHHHHHHHhhcCCCEEEECCCC
Confidence 3333333445566 44333333345678889 8999999999999854
No 436
>3nas_A Beta-PGM, beta-phosphoglucomutase; PSI, structural genomics, protein structure initiative, NEW research center for structural genomics; 3.00A {Bacillus subtilis}
Probab=37.73 E-value=1.7e+02 Score=23.90 Aligned_cols=20 Identities=10% Similarity=0.162 Sum_probs=12.6
Q ss_pred chHHHHhcceEEEEeCCCch
Q 014830 229 LGSELRRAGVFVKTVRDKPQ 248 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPq 248 (417)
+-..|+..|+.+-.+++.+.
T Consensus 100 ~l~~l~~~g~~~~i~t~~~~ 119 (233)
T 3nas_A 100 LLCQLKNENIKIGLASSSRN 119 (233)
T ss_dssp HHHHHHHTTCEEEECCSCTT
T ss_pred HHHHHHHCCCcEEEEcCchh
Confidence 34556666777777766654
No 437
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=37.30 E-value=98 Score=25.04 Aligned_cols=30 Identities=17% Similarity=0.218 Sum_probs=15.1
Q ss_pred EEEeeCCCCCCCCCchHHHHHHHHHHHHcCc
Q 014830 82 VVLWDLDNKPPRGPPYDAAMSLRRVAERFGE 112 (417)
Q Consensus 82 ~VlWDLDNKPP~~pPY~AA~rLr~~As~FG~ 112 (417)
.|+||+|.-==...+ .....+..++..+|.
T Consensus 7 ~i~fDlDGTL~d~~~-~~~~~~~~~~~~~g~ 36 (240)
T 3qnm_A 7 NLFFDLDDTIWAFSR-NARDTFEEVYQKYSF 36 (240)
T ss_dssp EEEECCBTTTBCHHH-HHHHHHHHHHHHTTG
T ss_pred EEEEcCCCCCcCchh-hHHHHHHHHHHHcCC
Confidence 578899965211111 122334556666664
No 438
>1zrn_A L-2-haloacid dehalogenase; hydrolase; 1.83A {Pseudomonas SP} SCOP: c.108.1.1 PDB: 1zrm_A 1jud_A 1qh9_A
Probab=37.27 E-value=1e+02 Score=25.31 Aligned_cols=65 Identities=15% Similarity=0.151 Sum_probs=0.0
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC-----cchHHHHHHHHHcCCc---EEEEcCC
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD-----NDFKEMLRKARDANLG---TVVVGDS 298 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD-----sdF~~~Lr~AR~~~v~---TVVVGd~ 298 (417)
..|+..|+.+-.+++.+... +...+.+.--...-..++.|++ ++=..+.+.+++.|+. +++|||+
T Consensus 105 ~~l~~~g~~~~i~t~~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~~~~~iGD~ 177 (232)
T 1zrn_A 105 RELKRRGLKLAILSNGSPQS---IDAVVSHAGLRDGFDHLLSVDPVQVYKPDNRVYELAEQALGLDRSAILFVASN 177 (232)
T ss_dssp HHHHHTTCEEEEEESSCHHH---HHHHHHHTTCGGGCSEEEESGGGTCCTTSHHHHHHHHHHHTSCGGGEEEEESC
T ss_pred HHHHHCCCEEEEEeCCCHHH---HHHHHHhcChHhhhheEEEecccCCCCCCHHHHHHHHHHcCCCcccEEEEeCC
No 439
>2e7z_A Acetylene hydratase AHY; tungstoprotein, DMSO reductase family, iron-sulfur-cluster, lyase; HET: MGD; 1.26A {Pelobacter acetylenicus}
Probab=37.12 E-value=24 Score=36.26 Aligned_cols=48 Identities=15% Similarity=0.345 Sum_probs=39.0
Q ss_pred CCcceEEEEeCCc------chHHHHHHHHHcCCcEEEEcCCCCccccccccccc
Q 014830 264 SGVDWMFLVSDDN------DFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVP 311 (417)
Q Consensus 264 rgv~cLvLVSDDs------dF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fS 311 (417)
...++||++--+. .+...|+.||++|.+-|||.-........||.|++
T Consensus 159 ~~ad~il~~G~n~~~~~p~~~~~~l~~a~~~G~klividPr~t~ta~~Ad~~l~ 212 (727)
T 2e7z_A 159 ADSNCLLFIGKNLSNHNWVSQFNDLKAALKRGCKLIVLDPRRTKVAEMADIWLP 212 (727)
T ss_dssp TTCSEEEEESCCCBTTBSHHHHHHHHHHHHHTCEEEEECSSCCHHHHHCSEEEC
T ss_pred ccCCEEEEECCChhhcCCHHHHHHHHHHHHCCCeEEEECCCCCcchhhcceeec
Confidence 4688998887552 67778899999999999998766677888999985
No 440
>1moq_A Glucosamine 6-phosphate synthase; glutamine amidotransferase; HET: GLP MES; 1.57A {Escherichia coli} SCOP: c.80.1.1 PDB: 1mor_A* 1mos_A*
Probab=36.58 E-value=18 Score=34.31 Aligned_cols=46 Identities=22% Similarity=0.299 Sum_probs=35.8
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcC-CcEEEEcCC-CCccccccccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDAN-LGTVVVGDS-NRGLGQHADLWVP 311 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~-v~TVVVGd~-~~~L~R~ADl~fS 311 (417)
-+.+|.+|-+ .+-..+++.|+++| .+||.|.+. ++.|.+.||..+.
T Consensus 100 ~dlvI~iS~SG~T~e~l~a~~~ak~~G~a~viaIT~~~~S~La~~ad~~l~ 150 (368)
T 1moq_A 100 NSLMITLSQSGETADTLAGLRLSKELGYLGSLAICNVPGSSLVRESDLALM 150 (368)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHTTTTCSEEEEEESSTTCHHHHHSSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCCeEEEEECCCCChHHHhCCEEEE
Confidence 3566777754 46677888899999 999999886 4789999997653
No 441
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=36.56 E-value=22 Score=35.49 Aligned_cols=44 Identities=20% Similarity=0.222 Sum_probs=36.4
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDD 275 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD 275 (417)
+.+|.+||++|+.|.+..... .+++||..+-..|+.++|+|-++
T Consensus 378 ~~la~~LR~~Gi~ve~~~~~~-----slkkq~k~A~k~ga~~vviiGe~ 421 (456)
T 3lc0_A 378 LAVLRRLRDAGRSADIILDKK-----KVVQAFNYADRVGAVRAVLVAPE 421 (456)
T ss_dssp HHHHHHHHHTTCCEEECCSCC-----CHHHHHHHHHHTTEEEEEEECHH
T ss_pred HHHHHHHHHCCCeEEEecCCC-----CHHHHHHHHHHcCCCEEEEECCc
Confidence 456899999999998864332 28899999999999999999876
No 442
>2iv2_X Formate dehydrogenase H; oxidoreductase, 4Fe-4S, anaerobic, complete proteome, direct protein sequencing, Fe4S4, iron, iron sulfur cluster; HET: 2MD MGD; 2.27A {Escherichia coli} SCOP: b.52.2.2 c.81.1.1 PDB: 1fdi_A* 1fdo_A* 1aa6_A*
Probab=36.56 E-value=27 Score=35.94 Aligned_cols=49 Identities=12% Similarity=0.176 Sum_probs=38.5
Q ss_pred CCcceEEEEeCC-----cchHHHHHHHHHcCCcEEEEcCCCCccccccccccch
Q 014830 264 SGVDWMFLVSDD-----NDFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVPW 312 (417)
Q Consensus 264 rgv~cLvLVSDD-----sdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fSW 312 (417)
...++||++--+ ..+..-|+.||++|.+-|||.-........||.|++=
T Consensus 165 ~~ad~il~~G~n~~~~~p~~~~~l~~a~~~G~klividPr~t~ta~~Ad~~l~i 218 (715)
T 2iv2_X 165 DNTDLVFVFGYNPADSHPIVANHVINAKRNGAKIIVCDPRKIETARIADMHIAL 218 (715)
T ss_dssp GGCSEEEEESCCHHHHCHHHHHHHHHHHHTTCEEEEECSSCCHHHHTCSEEECC
T ss_pred hcCCEEEEEcCChHHhCHHHHHHHHHHHHCCCeEEEEcCCCCchhHhhCEEecc
Confidence 347888888655 3455678889999999999988766788899999874
No 443
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=36.47 E-value=35 Score=29.27 Aligned_cols=75 Identities=11% Similarity=0.132 Sum_probs=41.7
Q ss_pred CCCchHHHHhcc-eEEEEeCCCchhH-------------HHHHHHHHHHhhhCCcceEEEEeCCcch----HHHHHHHHH
Q 014830 226 GYGLGSELRRAG-VFVKTVRDKPQAA-------------DWALKRQMQHSMSSGVDWMFLVSDDNDF----KEMLRKARD 287 (417)
Q Consensus 226 GYGLA~ELkRAG-V~VrtV~dKPqAA-------------D~ALkrhm~~~m~rgv~cLvLVSDDsdF----~~~Lr~AR~ 287 (417)
|-.++..|.++| ..|..+...|..+ |..=...+..++ .+++.||......++ ..+++.+++
T Consensus 36 G~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~D~vv~~a~~~~~~~~~~~~~~~~~~ 114 (236)
T 3qvo_A 36 ARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQAM-QGQDIVYANLTGEDLDIQANSVIAAMKA 114 (236)
T ss_dssp HHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHHH-TTCSEEEEECCSTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHHh-cCCCEEEEcCCCCchhHHHHHHHHHHHH
Confidence 455677777777 7776554333211 111011122222 478888765544443 347888999
Q ss_pred cCCcEEEEcCCCCc
Q 014830 288 ANLGTVVVGDSNRG 301 (417)
Q Consensus 288 ~~v~TVVVGd~~~~ 301 (417)
++++.+|.=.+.+.
T Consensus 115 ~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 115 CDVKRLIFVLSLGI 128 (236)
T ss_dssp TTCCEEEEECCCCC
T ss_pred cCCCEEEEEeccee
Confidence 99987765444333
No 444
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=36.30 E-value=1.3e+02 Score=27.33 Aligned_cols=31 Identities=13% Similarity=-0.125 Sum_probs=22.3
Q ss_pred CCcceEEEEeC-CcchHHHHHHHHHcCCcEEEEcC
Q 014830 264 SGVDWMFLVSD-DNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 264 rgv~cLvLVSD-DsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
.++|+|| +| -..|.. .-.|+..|+..|.+.-
T Consensus 117 ~~PDlVi--~d~~~~~~~-~~aA~~~giP~v~~~~ 148 (415)
T 3rsc_A 117 DVPDLVL--YDDFPFIAG-QLLAARWRRPAVRLSA 148 (415)
T ss_dssp SCCSEEE--EESTTHHHH-HHHHHHTTCCEEEEES
T ss_pred cCCCEEE--ECchhhhHH-HHHHHHhCCCEEEEEe
Confidence 5688765 56 455554 5578999999998873
No 445
>1tzb_A Glucose-6-phosphate isomerase, conjectural; enzyme, crenarchaeon, hyperthermophIle, PGI family; 1.16A {Pyrobaculum aerophilum} SCOP: c.80.1.1 PDB: 1tzc_A* 1x9h_A* 1x9i_A*
Probab=36.28 E-value=42 Score=30.94 Aligned_cols=45 Identities=13% Similarity=0.071 Sum_probs=35.9
Q ss_pred CCcceEEEEeCC---cchHHHHHHHHHcCCcEEEEcCCCCcccccccccc
Q 014830 264 SGVDWMFLVSDD---NDFKEMLRKARDANLGTVVVGDSNRGLGQHADLWV 310 (417)
Q Consensus 264 rgv~cLvLVSDD---sdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~f 310 (417)
..-+.+|.+|-+ .+-..+++.|+++|.+||.|.+.. .|.+. |+.+
T Consensus 78 ~~~dlvI~iS~SG~T~e~~~a~~~ak~~g~~~iaIT~~~-~La~~-~~~l 125 (302)
T 1tzb_A 78 ARDGLLIAVSYSGNTIETLYTVEYAKRRRIPAVAITTGG-RLAQM-GVPT 125 (302)
T ss_dssp CSSSEEEEECSSSCCHHHHHHHHHHHHTTCCEEEEESST-TGGGS-SSCE
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEECCCc-hHHHC-CeeE
Confidence 334667778754 467778899999999999999987 89888 8766
No 446
>2p9j_A Hypothetical protein AQ2171; secsg, riken, PSI, structural GENO protein structure initiative, southeast collaboratory for S genomics; 2.40A {Aquifex aeolicus}
Probab=36.02 E-value=1.2e+02 Score=24.16 Aligned_cols=65 Identities=14% Similarity=0.248 Sum_probs=0.0
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCC---cEEEEcCCCCcc
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANL---GTVVVGDSNRGL 302 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v---~TVVVGd~~~~L 302 (417)
..|++.|+.+-.+++.+... +...+.+. |++..+-. .-+.=..+.+.+++.++ .+++|||+..++
T Consensus 46 ~~l~~~g~~~~i~T~~~~~~---~~~~l~~~---gl~~~~~~-~kp~~~~~~~~~~~~~~~~~~~~~vGD~~~Di 113 (162)
T 2p9j_A 46 KLLQKMGITLAVISGRDSAP---LITRLKEL---GVEEIYTG-SYKKLEIYEKIKEKYSLKDEEIGFIGDDVVDI 113 (162)
T ss_dssp HHHHTTTCEEEEEESCCCHH---HHHHHHHT---TCCEEEEC-C--CHHHHHHHHHHTTCCGGGEEEEECSGGGH
T ss_pred HHHHHCCCEEEEEeCCCcHH---HHHHHHHc---CCHhhccC-CCCCHHHHHHHHHHcCCCHHHEEEECCCHHHH
No 447
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.62 E-value=92 Score=26.59 Aligned_cols=65 Identities=22% Similarity=0.221 Sum_probs=40.3
Q ss_pred chHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc----chHHHHHHHHHcCC--cEEEEcCC
Q 014830 229 LGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN----DFKEMLRKARDANL--GTVVVGDS 298 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs----dF~~~Lr~AR~~~v--~TVVVGd~ 298 (417)
++..|+.+||.|.-. +..+..+..+.. +...+++.++|-+-.. .+..+++..|++|. -.|+||..
T Consensus 38 va~~l~~~G~eVi~l-G~~~p~e~lv~a----a~~~~~diV~lS~~~~~~~~~~~~~i~~L~~~g~~~i~v~vGG~ 108 (161)
T 2yxb_A 38 VARALRDAGFEVVYT-GLRQTPEQVAMA----AVQEDVDVIGVSILNGAHLHLMKRLMAKLRELGADDIPVVLGGT 108 (161)
T ss_dssp HHHHHHHTTCEEECC-CSBCCHHHHHHH----HHHTTCSEEEEEESSSCHHHHHHHHHHHHHHTTCTTSCEEEEEC
T ss_pred HHHHHHHCCCEEEEC-CCCCCHHHHHHH----HHhcCCCEEEEEeechhhHHHHHHHHHHHHhcCCCCCEEEEeCC
Confidence 467899999999955 222222222221 2346888777766443 45667777888875 34777763
No 448
>2gm3_A Unknown protein; AT3G01520, putative ethylene-responsive protein, USP domain, nucleotide binding domain, AMP; HET: MSE AMP; 2.46A {Arabidopsis thaliana} SCOP: c.26.2.4
Probab=35.59 E-value=80 Score=25.52 Aligned_cols=37 Identities=14% Similarity=0.188 Sum_probs=25.3
Q ss_pred hCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 263 SSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 263 ~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
..|+.+-+.|-...-...+++.|++.+..-||+|...
T Consensus 98 ~~g~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~g 134 (175)
T 2gm3_A 98 EIGVGCEAWIKTGDPKDVICQEVKRVRPDFLVVGSRG 134 (175)
T ss_dssp HHTCEEEEEEEESCHHHHHHHHHHHHCCSEEEEEECC
T ss_pred HCCCceEEEEecCCHHHHHHHHHHHhCCCEEEEeCCC
Confidence 3455443222223456788999999999999999854
No 449
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=35.58 E-value=90 Score=27.07 Aligned_cols=46 Identities=15% Similarity=0.201 Sum_probs=29.8
Q ss_pred CCCchhHHHHHHHHHHHhhhCCcceEEEEeCC--cchHHHHHHHHHcCCcEEEEcCC
Q 014830 244 RDKPQAADWALKRQMQHSMSSGVDWMFLVSDD--NDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 244 ~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDD--sdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
..||.+. .+..-++. ...+-.+.|.|+ .| +..|++.|++||.|..+
T Consensus 185 ~~KP~~~--~~~~~~~~---~~~~~~~~VGD~~~~D----i~~A~~aG~~~i~v~~g 232 (263)
T 1zjj_A 185 IGKPNEP--MYEVVREM---FPGEELWMVGDRLDTD----IAFAKKFGMKAIMVLTG 232 (263)
T ss_dssp CSTTSHH--HHHHHHHH---STTCEEEEEESCTTTH----HHHHHHTTCEEEEESSS
T ss_pred ecCCCHH--HHHHHHHh---CCcccEEEECCChHHH----HHHHHHcCCeEEEECCC
Confidence 4677654 22222222 455667778887 45 66888999999999764
No 450
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=35.21 E-value=56 Score=28.13 Aligned_cols=69 Identities=19% Similarity=0.206 Sum_probs=46.7
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcCC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGDS 298 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd~ 298 (417)
|..+|..|.+.|..|-.+...+...+.+ ...+ ...+..+.++..|=+|...+-+.+.+. ++..||-..+
T Consensus 22 G~~~a~~l~~~G~~V~~~~r~~~~~~~~-~~~~---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~Ag 95 (253)
T 3qiv_A 22 GQAYAEALAREGAAVVVADINAEAAEAV-AKQI---VADGGTAISVAVDVSDPESAKAMADRTLAEFGGIDYLVNNAA 95 (253)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHH---HHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHHH---HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECCC
Confidence 5788999999999998875544444333 3323 335667788888888877766665543 7777776553
No 451
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=34.97 E-value=27 Score=28.13 Aligned_cols=72 Identities=17% Similarity=0.245 Sum_probs=42.1
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHH-------------HHhhhCCcceEEEEeCCcc-hHHHHHHHHHc--C
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQM-------------QHSMSSGVDWMFLVSDDND-FKEMLRKARDA--N 289 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm-------------~~~m~rgv~cLvLVSDDsd-F~~~Lr~AR~~--~ 289 (417)
|..+|..|++.|+.|..+...|+..+.+..... ...--.+++.+|+..++.. -..+...||+. +
T Consensus 19 G~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~~n~~~~~~a~~~~~~ 98 (140)
T 3fwz_A 19 GSLLGEKLLASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGYEAGEIVASARAKNPD 98 (140)
T ss_dssp HHHHHHHHHHTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChHHHHHHHHHHHHHCCC
Confidence 345789999999999999777776655443211 1111134676665555433 33456677776 3
Q ss_pred CcEEEEcC
Q 014830 290 LGTVVVGD 297 (417)
Q Consensus 290 v~TVVVGd 297 (417)
+++|+.-.
T Consensus 99 ~~iiar~~ 106 (140)
T 3fwz_A 99 IEIIARAH 106 (140)
T ss_dssp SEEEEEES
T ss_pred CeEEEEEC
Confidence 44444333
No 452
>3umb_A Dehalogenase-like hydrolase; 2.20A {Ralstonia solanacearum}
Probab=34.88 E-value=1e+02 Score=25.06 Aligned_cols=44 Identities=11% Similarity=0.013 Sum_probs=23.9
Q ss_pred hhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC---Ccccccccc
Q 014830 262 MSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN---RGLGQHADL 308 (417)
Q Consensus 262 m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~---~~L~R~ADl 308 (417)
++...+-.+.|.|. ..+ +..|+..|+++|.|..+. ..++..||.
T Consensus 168 ~~~~~~~~~~vGD~--~~D-i~~a~~~G~~~~~v~~~~~~~~~~~~~~~~ 214 (233)
T 3umb_A 168 FGVPAAQILFVSSN--GWD-ACGATWHGFTTFWINRLGHPPEALDVAPAA 214 (233)
T ss_dssp HTSCGGGEEEEESC--HHH-HHHHHHHTCEEEEECTTCCCCCSSSCCCSE
T ss_pred hCCCcccEEEEeCC--HHH-HHHHHHcCCEEEEEcCCCCCchhccCCCCE
Confidence 34444455555544 344 467777788877775432 234444554
No 453
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=34.53 E-value=21 Score=32.93 Aligned_cols=66 Identities=8% Similarity=-0.045 Sum_probs=43.6
Q ss_pred hHHHHhcceEEEEeCCC-chhHHHHHHHHHHHhhhCCcceEEEEeCC-cchHHHHHHHHHcCCcEEEEcC
Q 014830 230 GSELRRAGVFVKTVRDK-PQAADWALKRQMQHSMSSGVDWMFLVSDD-NDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dK-PqAAD~ALkrhm~~~m~rgv~cLvLVSDD-sdF~~~Lr~AR~~~v~TVVVGd 297 (417)
...|++.|+.|.....- +...| +...+..+...+++.|++.+-. .+...+++.+++.|++..++|.
T Consensus 185 ~~~~~~~g~~vv~~~~~~~~~~d--~~~~l~~i~~~~~d~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 252 (419)
T 3h5l_A 185 RDGAGEYGYDVSLFETVAIPVSD--WGPTLAKLRADPPAVIVVTHFYPQDQALFMNQFMTDPTNSLVYLQ 252 (419)
T ss_dssp HHHGGGGTCEEEEEEECCSSCSC--CHHHHHHHHHSCCSEEEECCCCHHHHHHHHHHHTTSCCSCEEEEC
T ss_pred HHHHHHcCCeEEEEecCCCCCcc--HHHHHHHHHhcCCCEEEEccccCchHHHHHHHHHHcCCCceEEec
Confidence 44566778776533211 12222 2344455667899988877554 5789999999999998887775
No 454
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=34.21 E-value=1.1e+02 Score=28.51 Aligned_cols=66 Identities=20% Similarity=0.285 Sum_probs=41.4
Q ss_pred hHHHHhc-ce--EEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCc-------chHHHHHHH-HHcCCcEEEEcCC
Q 014830 230 GSELRRA-GV--FVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDN-------DFKEMLRKA-RDANLGTVVVGDS 298 (417)
Q Consensus 230 A~ELkRA-GV--~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDs-------dF~~~Lr~A-R~~~v~TVVVGd~ 298 (417)
|..|+.+ |- .|..+.-.|..++.+|+. ++..|++-+++|+|+. ..+.+|..+ ++.+..-|+.|..
T Consensus 46 A~~Lke~~g~~~~V~av~~G~~~~~~~lr~----ala~GaD~vi~v~d~~~~~~~~~~~a~~La~~i~~~~~dlVl~G~~ 121 (264)
T 1o97_C 46 AMKIKESSDTDVEVVVVSVGPDRVDESLRK----CLAKGADRAVRVWDDAAEGSDAIVVGRILTEVIKKEAPDMVFAGVQ 121 (264)
T ss_dssp HHHHHHHCSSCCEEEEEEESCGGGHHHHHH----HHHTTCSEEEEECCGGGTTCCHHHHHHHHHHHHHHHCCSEEEEESC
T ss_pred HHHHHHhcCCCceEEEEEeCchhHHHHHHH----HHhcCCCEEEEEcCcccccCCHHHHHHHHHHHHHhcCCCEEEEcCC
Confidence 4455543 33 566565566545556665 3456999999999764 233455444 4457788999985
Q ss_pred C
Q 014830 299 N 299 (417)
Q Consensus 299 ~ 299 (417)
.
T Consensus 122 s 122 (264)
T 1o97_C 122 S 122 (264)
T ss_dssp C
T ss_pred c
Confidence 4
No 455
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=34.09 E-value=7.3 Score=32.57 Aligned_cols=35 Identities=6% Similarity=0.082 Sum_probs=22.1
Q ss_pred HHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc
Q 014830 256 RQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG 291 (417)
Q Consensus 256 rhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~ 291 (417)
..++++..+|+..+++ +---.=.++++.||+.|++
T Consensus 73 ~~v~e~~~~g~k~v~~-~~G~~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 73 SEYNYILSLKPKRVIF-NPGTENEELEEILSENGIE 107 (122)
T ss_dssp GGHHHHHHHCCSEEEE-CTTCCCHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCCCEEEE-CCCCChHHHHHHHHHcCCe
Confidence 3355566677776554 3323336788888888876
No 456
>2ivf_A Ethylbenzene dehydrogenase alpha-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=33.94 E-value=41 Score=36.40 Aligned_cols=48 Identities=23% Similarity=0.300 Sum_probs=37.7
Q ss_pred CCcceEEEEeCC-----cchHHHHHHHHHcCCcEEEEcCCCCccccccccccc
Q 014830 264 SGVDWMFLVSDD-----NDFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVP 311 (417)
Q Consensus 264 rgv~cLvLVSDD-----sdF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fS 311 (417)
...++||++--+ ......|+.||++|.+.|||.-........||.|++
T Consensus 245 ~nad~Il~~G~N~~~~~p~~~~~~~~ar~~GakvivVDPr~t~ta~~AD~wl~ 297 (976)
T 2ivf_A 245 LDAELIFMTCSNWSYTYPSSYHFLSEARYKGAEVVVIAPDFNPTTPAADLHVP 297 (976)
T ss_dssp GGCSEEEEESCCHHHHCTTTHHHHHHHHHHTCEEEEECSSCCTTGGGCSEEEC
T ss_pred hhCcEEEEeCCChhHcccHHHHHHHHHHHcCCEEEEECCCCCcchhhcCeEec
Confidence 457888888654 234567889999999999998766677889999985
No 457
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=33.61 E-value=60 Score=29.05 Aligned_cols=76 Identities=18% Similarity=0.271 Sum_probs=44.3
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHH------------------------HHHHHhhhCCcceEEEEeCCcc----
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALK------------------------RQMQHSMSSGVDWMFLVSDDND---- 277 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALk------------------------rhm~~~m~rgv~cLvLVSDDsd---- 277 (417)
|.-|+..|.+.|..|..+...+......+. ..+..++ .+++.||-......
T Consensus 38 G~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~-~~~d~Vih~A~~~~~~~~ 116 (351)
T 3ruf_A 38 GSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVM-KGVDHVLHQAALGSVPRS 116 (351)
T ss_dssp HHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHT-TTCSEEEECCCCCCHHHH
T ss_pred HHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHh-cCCCEEEECCccCCcchh
Confidence 456788888888888876543332111111 1122233 38998887665322
Q ss_pred --------------hHHHHHHHHHcCCcEEEEcCCCCcc
Q 014830 278 --------------FKEMLRKARDANLGTVVVGDSNRGL 302 (417)
Q Consensus 278 --------------F~~~Lr~AR~~~v~TVVVGd~~~~L 302 (417)
...+++.|++.+++.+|.-.+....
T Consensus 117 ~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~vy 155 (351)
T 3ruf_A 117 IVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSSTY 155 (351)
T ss_dssp HHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGGGG
T ss_pred hhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHHhc
Confidence 1237999999999776654433333
No 458
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=33.54 E-value=77 Score=28.29 Aligned_cols=70 Identities=16% Similarity=0.198 Sum_probs=45.7
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcCC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGDS 298 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd~ 298 (417)
|..+|..|-++|..|-.+...+...-.++...+ -..|..+.++..|-+|...+-+.+.+. ++..+|--.+
T Consensus 44 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvnnAg 118 (271)
T 3v2g_A 44 GAAIAKRLALEGAAVALTYVNAAERAQAVVSEI---EQAGGRAVAIRADNRDAEAIEQAIRETVEALGGLDILVNSAG 118 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH---HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHH---HhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCcEEEECCC
Confidence 577899999999999877444433323344433 235777888888888877665555443 6776665443
No 459
>2dum_A Hypothetical protein PH0823; conserved hypothetical protein, putative universal protein A structural genomics, NPPSFA; 2.75A {Pyrococcus horikoshii}
Probab=33.46 E-value=94 Score=24.90 Aligned_cols=24 Identities=13% Similarity=0.374 Sum_probs=20.7
Q ss_pred cchHHHHHHHHHcCCcEEEEcCCC
Q 014830 276 NDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 276 sdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.--..+++.|++.+..-||+|...
T Consensus 104 ~~~~~I~~~a~~~~~DlIV~G~~g 127 (170)
T 2dum_A 104 IPWDEIVKVAEEENVSLIILPSRG 127 (170)
T ss_dssp CHHHHHHHHHHHTTCSEEEEESCC
T ss_pred ChHHHHHHHHHHcCCCEEEECCCC
Confidence 456789999999999999999864
No 460
>4fe3_A Cytosolic 5'-nucleotidase 3; substrate complex, HAD-like, protein binding; HET: U5P; 1.74A {Mus musculus} PDB: 2g09_A* 2bdu_A* 2g08_A 2g06_A* 2g0a_A* 2q4t_A* 2g07_A* 2jga_A 2vkq_A 2cn1_A
Probab=33.14 E-value=60 Score=29.07 Aligned_cols=28 Identities=18% Similarity=0.105 Sum_probs=20.3
Q ss_pred cCCCCC-CCchHHHHhcceEEEEeCCCch
Q 014830 221 LKPKVG-YGLGSELRRAGVFVKTVRDKPQ 248 (417)
Q Consensus 221 L~PKvG-YGLA~ELkRAGV~VrtV~dKPq 248 (417)
+.++-| -.+-..|+++|+.|..+++.-.
T Consensus 140 i~l~~g~~e~i~~l~~~gi~v~ivSgg~~ 168 (297)
T 4fe3_A 140 VMLKEGYENFFGKLQQHGIPVFIFSAGIG 168 (297)
T ss_dssp CCBCBTHHHHHHHHHHTTCCEEEEEEEEH
T ss_pred CCCCCcHHHHHHHHHHcCCeEEEEeCCcH
Confidence 444445 4566789999999999987543
No 461
>3fvv_A Uncharacterized protein; unknown function, structural genomics, PSI,MCSG, protein STR initiative, midwest center for structural genomics; 2.10A {Bordetella pertussis}
Probab=32.62 E-value=45 Score=27.61 Aligned_cols=77 Identities=13% Similarity=0.012 Sum_probs=42.8
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceE---EEEeCC----------cch-----HHHHHHHHHcC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWM---FLVSDD----------NDF-----KEMLRKARDAN 289 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cL---vLVSDD----------sdF-----~~~Lr~AR~~~ 289 (417)
.+-..|+..|+.+-.|+..|...=..+-+ ..|++.+ .+.+++ ..+ ..+.+.+++.|
T Consensus 99 ~~l~~l~~~g~~~~ivS~~~~~~~~~~~~------~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~K~~~~~~~~~~~~ 172 (232)
T 3fvv_A 99 DVVRGHLAAGDLCALVTATNSFVTAPIAR------AFGVQHLIATDPEYRDGRYTGRIEGTPSFREGKVVRVNQWLAGMG 172 (232)
T ss_dssp HHHHHHHHTTCEEEEEESSCHHHHHHHHH------HTTCCEEEECEEEEETTEEEEEEESSCSSTHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHCCCEEEEEeCCCHHHHHHHHH------HcCCCEEEEcceEEECCEEeeeecCCCCcchHHHHHHHHHHHHcC
Confidence 34567889999999999988744111111 1354422 122222 112 22345566677
Q ss_pred ---C---cEEEEcCCCCcc--cccccccc
Q 014830 290 ---L---GTVVVGDSNRGL--GQHADLWV 310 (417)
Q Consensus 290 ---v---~TVVVGd~~~~L--~R~ADl~f 310 (417)
+ .+++|||+..++ .+.|+..+
T Consensus 173 ~~~~~~~~~~~vGDs~~D~~~~~~ag~~~ 201 (232)
T 3fvv_A 173 LALGDFAESYFYSDSVNDVPLLEAVTRPI 201 (232)
T ss_dssp CCGGGSSEEEEEECCGGGHHHHHHSSEEE
T ss_pred CCcCchhheEEEeCCHhhHHHHHhCCCeE
Confidence 4 489999987544 44454433
No 462
>3tbf_A Glucosamine--fructose-6-phosphate aminotransferas [isomerizing]; structural genomics; 2.28A {Francisella tularensis subsp}
Probab=32.53 E-value=21 Score=34.38 Aligned_cols=46 Identities=24% Similarity=0.349 Sum_probs=36.6
Q ss_pred cceEEEEeCC---cchHHHHHHHHHcC-CcEEEEcCC-CCccccccccccc
Q 014830 266 VDWMFLVSDD---NDFKEMLRKARDAN-LGTVVVGDS-NRGLGQHADLWVP 311 (417)
Q Consensus 266 v~cLvLVSDD---sdF~~~Lr~AR~~~-v~TVVVGd~-~~~L~R~ADl~fS 311 (417)
-+.+|.+|-+ .+-..+++.|+++| .+||.|.+. ++.|.+.||..+.
T Consensus 102 ~dlvI~iS~SG~T~e~l~al~~ak~~G~a~~iaIT~~~~S~La~~aD~~l~ 152 (372)
T 3tbf_A 102 GSLFVSISQSGETADTLESLRKSKKQNYVGSMCICNVPNSSLVRESDIAFM 152 (372)
T ss_dssp TEEEEEEESSSCCHHHHHHHHHHTTTTEEEEEEEESSSSSHHHHHSSEEEE
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHcCCceEEEEcCCCCChHHHhCCEeee
Confidence 3566777764 46777888999999 999999985 5789999998764
No 463
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=32.36 E-value=1e+02 Score=27.80 Aligned_cols=70 Identities=23% Similarity=0.292 Sum_probs=46.9
Q ss_pred CCCCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcCC
Q 014830 225 VGYGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGDS 298 (417)
Q Consensus 225 vGYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd~ 298 (417)
+|..+|..|-+.|..|-.+...+...+.+. ..+ -..|..+.++..|=++...+-+.+.+. ++..||--.+
T Consensus 43 IG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~l---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 43 IGLATATEFARRGARLVLSDVDQPALEQAV-NGL---RGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHH---HHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCSEEEECCC
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHH---HhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 357889999999999988755554443332 222 335778888888888877766655543 6776665554
No 464
>3hsy_A Glutamate receptor 2; ligand-gated ION channel, synapse, cell CELL membrane, endoplasmic reticulum, glycoprotein, ION TRA ionic channel; HET: NAG BMA; 1.75A {Rattus norvegicus} PDB: 3h5v_A* 3h5w_A 3o2j_A* 2wjw_A* 2wjx_A 3n6v_A
Probab=32.18 E-value=36 Score=31.16 Aligned_cols=61 Identities=7% Similarity=0.016 Sum_probs=32.4
Q ss_pred HHHHhcceEEEEeCCCc-h--hHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCc
Q 014830 231 SELRRAGVFVKTVRDKP-Q--AADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLG 291 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKP-q--AAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~ 291 (417)
.+|++.|..|-...--| . +.+.-....+..+...+++.|++.+...+...+++.|++.|+.
T Consensus 142 ~~~~~~g~~v~~~~~~~~~~~~~~~d~~~~l~~i~~~~~~vii~~~~~~~~~~~~~qa~~~g~~ 205 (376)
T 3hsy_A 142 DSAAEKKWQVTAINVGNINNDKKDETYRSLFQDLELKKERRVILDCERDKVNDIVDQVITIGKH 205 (376)
T ss_dssp HHHHHHTCEEEEEECTTCC--------------------CEEEEESCHHHHHHHHHHHHHHTSS
T ss_pred HHhhhcCCeEEEEEeccccccccchhHHHHHHHHhhCCCeEEEEECCHHHHHHHHHHHHHcccC
Confidence 45667787765332211 1 2233456666677778999999999999999999999999984
No 465
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=32.05 E-value=84 Score=27.58 Aligned_cols=70 Identities=16% Similarity=0.084 Sum_probs=45.5
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcCC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGDS 298 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd~ 298 (417)
|..+|..|-+.|..|-.+.......-..+...+ ...+..+.++..|=++...+-+.+.+. ++..||--.+
T Consensus 39 G~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~li~nAg 113 (272)
T 4e3z_A 39 GAAVCRLAARQGWRVGVNYAANREAADAVVAAI---TESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRLDGLVNNAG 113 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHH---HHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHH---HhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEECCC
Confidence 577899999999999765343333322333333 335677888888888877776665554 6776665443
No 466
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=31.92 E-value=15 Score=31.21 Aligned_cols=13 Identities=31% Similarity=0.575 Sum_probs=11.8
Q ss_pred CCCeecccCCCCC
Q 014830 154 NDPYICGVCGRKC 166 (417)
Q Consensus 154 ~~PY~C~VCGRkf 166 (417)
..||.|.-||..|
T Consensus 65 v~p~~C~~CG~~F 77 (105)
T 2gmg_A 65 IKPAQCRKCGFVF 77 (105)
T ss_dssp ECCCBBTTTCCBC
T ss_pred EECcChhhCcCee
Confidence 3689999999999
No 467
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=31.92 E-value=1.4e+02 Score=22.53 Aligned_cols=63 Identities=13% Similarity=0.212 Sum_probs=39.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc--CCcEEEEcCCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA--NLGTVVVGDSN 299 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~--~v~TVVVGd~~ 299 (417)
-.|...|++.|+.|.++.+..+|-+ .+. ...++.++ ..+ .+-.++++..|+. .+..|+++...
T Consensus 32 ~~l~~~L~~~g~~v~~~~~~~~al~-~l~-------~~~~dlvi-~~~-~~g~~~~~~l~~~~~~~~ii~ls~~~ 96 (137)
T 2pln_A 32 GEIEKGLNVKGFMADVTESLEDGEY-LMD-------IRNYDLVM-VSD-KNALSFVSRIKEKHSSIVVLVSSDNP 96 (137)
T ss_dssp HHHHHHHHHTTCEEEEESCHHHHHH-HHH-------HSCCSEEE-ECS-TTHHHHHHHHHHHSTTSEEEEEESSC
T ss_pred HHHHHHHHHcCcEEEEeCCHHHHHH-HHH-------cCCCCEEE-EcC-ccHHHHHHHHHhcCCCccEEEEeCCC
Confidence 3567788889999998866544442 122 24577666 443 3444667776665 67778877643
No 468
>3g85_A Transcriptional regulator (LACI family); transcription regulator, PSI-II, structural genomics structure initiative; 1.84A {Clostridium acetobutylicum atcc 824}
Probab=31.90 E-value=6.8 Score=33.91 Aligned_cols=92 Identities=16% Similarity=0.078 Sum_probs=53.4
Q ss_pred CCchHHHHhcceEEEEeC--CCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCCCcccc
Q 014830 227 YGLGSELRRAGVFVKTVR--DKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSNRGLGQ 304 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~--dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~~~L~R 304 (417)
.|+..++++.|+.+.... ..+... ...++.+.+++++-||+++-+..-..++ .+.+.++..|+++... ..
T Consensus 32 ~gi~~~a~~~g~~~~~~~~~~~~~~~----~~~~~~l~~~~vdgiIi~~~~~~~~~~~-~~~~~~iPvV~~~~~~---~~ 103 (289)
T 3g85_A 32 RGLQSKLAKQNYNYNVVICPYKTDCL----HLEKGISKENSFDAAIIANISNYDLEYL-NKASLTLPIILFNRLS---NK 103 (289)
T ss_dssp HHHHHHHHHTTTCSEEEEEEECTTCG----GGCGGGSTTTCCSEEEESSCCHHHHHHH-HHCCCSSCEEEESCCC---SS
T ss_pred HHHHHHHHHcCCeEEEEecCCCchhH----HHHHHHHhccCCCEEEEecCCcccHHHH-HhccCCCCEEEECCCC---CC
Confidence 466777888888766542 122211 2234455679999999988665444444 3457889999998742 22
Q ss_pred ccccccchhhhhcCcccccccccC
Q 014830 305 HADLWVPWIEVENGELTERDLVPR 328 (417)
Q Consensus 305 ~ADl~fSW~eV~~Gk~~~~~~~~~ 328 (417)
.. ++..+....|+.--+-|..+
T Consensus 104 ~~--~V~~D~~~~~~~a~~~L~~~ 125 (289)
T 3g85_A 104 YS--SVNVDNYKMGEKASLLFAKK 125 (289)
T ss_dssp SE--EEEECHHHHHHHHHHHHHHT
T ss_pred CC--EEEeCHHHHHHHHHHHHHHc
Confidence 21 34444455555444444443
No 469
>3um9_A Haloacid dehalogenase, type II; haloacid dehalogenase-like hydrolase protein superfamily, defluorinase, hydrolase; 2.19A {Polaromonas SP}
Probab=31.66 E-value=1.3e+02 Score=24.27 Aligned_cols=65 Identities=15% Similarity=0.171 Sum_probs=0.0
Q ss_pred HHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcch-----HHHHHHHHHcCCc---EEEEcCC
Q 014830 231 SELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDF-----KEMLRKARDANLG---TVVVGDS 298 (417)
Q Consensus 231 ~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF-----~~~Lr~AR~~~v~---TVVVGd~ 298 (417)
..|+..|+.+-.+++.+... +..-+.+.--...-..++.|++... ..+.+.+++.|+. +++|||+
T Consensus 106 ~~l~~~g~~~~i~s~~~~~~---~~~~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~~~~~iGD~ 178 (230)
T 3um9_A 106 QQLRAAGLKTAILSNGSRHS---IRQVVGNSGLTNSFDHLISVDEVRLFKPHQKVYELAMDTLHLGESEILFVSCN 178 (230)
T ss_dssp HHHHHTTCEEEEEESSCHHH---HHHHHHHHTCGGGCSEEEEGGGTTCCTTCHHHHHHHHHHHTCCGGGEEEEESC
T ss_pred HHHHhCCCeEEEEeCCCHHH---HHHHHHHCCChhhcceeEehhhcccCCCChHHHHHHHHHhCCCcccEEEEeCC
No 470
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=31.54 E-value=28 Score=29.04 Aligned_cols=39 Identities=18% Similarity=0.254 Sum_probs=25.1
Q ss_pred HHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 258 MQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 258 m~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
++++...|+..+++-+ ...-.++.+.|++.|++ +||+.+
T Consensus 87 ~~~~~~~gi~~i~~~~-g~~~~~~~~~a~~~Gir--~vgpnc 125 (140)
T 1iuk_A 87 LPEVLALRPGLVWLQS-GIRHPEFEKALKEAGIP--VVADRC 125 (140)
T ss_dssp HHHHHHHCCSCEEECT-TCCCHHHHHHHHHTTCC--EEESCC
T ss_pred HHHHHHcCCCEEEEcC-CcCHHHHHHHHHHcCCE--EEcCCc
Confidence 4455667777665443 33347788888888876 567654
No 471
>2nap_A Protein (periplasmic nitrate reductase); nitrogenous acceptor, dissimilatory nitrate reductase; HET: MGD MES; 1.90A {Desulfovibrio desulfuricans} SCOP: b.52.2.2 c.81.1.1 PDB: 2jim_A* 2jir_A* 2jip_A* 2v45_A* 2v3v_A* 2jiq_A* 2jio_A*
Probab=31.49 E-value=47 Score=34.08 Aligned_cols=49 Identities=10% Similarity=0.270 Sum_probs=38.4
Q ss_pred CCcceEEEEeCC-----cchHHHHHHHHHc--CCcEEEEcCCCCccccccccccch
Q 014830 264 SGVDWMFLVSDD-----NDFKEMLRKARDA--NLGTVVVGDSNRGLGQHADLWVPW 312 (417)
Q Consensus 264 rgv~cLvLVSDD-----sdF~~~Lr~AR~~--~v~TVVVGd~~~~L~R~ADl~fSW 312 (417)
...++||++--+ ..+..-|+.|+++ |.+.|||.-........||.|++=
T Consensus 165 ~~ad~il~~G~n~~~~~p~~~~~~~~a~~~~~g~klividP~~t~ta~~Ad~~l~i 220 (723)
T 2nap_A 165 DQATCFFIIGSNTSEAHPVLFRRIARRKQVEPGVKIIVADPRRTNTSRIADMHVAF 220 (723)
T ss_dssp GTCSEEEEESCCHHHHSHHHHHHHHHHHHHCTTCEEEEECSBCCGGGGGCSEEECC
T ss_pred hHCCEEEEEcCChhHhCcHHHHHHHHHHhhCCCCEEEEEcCcCCchhhhhCeeeec
Confidence 457888888655 3345567889988 999999988766788899999874
No 472
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=31.02 E-value=82 Score=24.80 Aligned_cols=29 Identities=14% Similarity=0.104 Sum_probs=15.6
Q ss_pred EEEeeCCCCCCCC-CchHHHHHHHHHHHHcCc
Q 014830 82 VVLWDLDNKPPRG-PPYDAAMSLRRVAERFGE 112 (417)
Q Consensus 82 ~VlWDLDNKPP~~-pPY~AA~rLr~~As~FG~ 112 (417)
.|++|+|.-==.+ +.+ ......++..+|.
T Consensus 7 ~i~fDlDGTL~~~~~~~--~~~~~~~~~~~g~ 36 (214)
T 3e58_A 7 AIIFDMDGVLFDTEKYY--YDRRASFLGQKGI 36 (214)
T ss_dssp EEEEESBTTTBCCHHHH--HHHHHHHHHHTTC
T ss_pred EEEEcCCCCccccHHHH--HHHHHHHHHHcCC
Confidence 5788999752212 222 2334556666664
No 473
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=30.97 E-value=1.1e+02 Score=26.33 Aligned_cols=70 Identities=13% Similarity=0.145 Sum_probs=46.4
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcCC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGDS 298 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd~ 298 (417)
|..+|..|-+.|..|-.+...++..-.+++... -..+..+.++..|=++...+-+.+.+. ++..||--.+
T Consensus 20 G~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id~lv~~Ag 94 (264)
T 3i4f_A 20 GKQVTEKLLAKGYSVTVTYHSDTTAMETMKETY---KDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKIDFLINNAG 94 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHT---GGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEECCCC
T ss_pred HHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHH---HhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEEEECCc
Confidence 577899999999999987555554433444432 234566778888888777666655544 6776665544
No 474
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=30.97 E-value=95 Score=26.87 Aligned_cols=68 Identities=19% Similarity=0.269 Sum_probs=43.9
Q ss_pred CCCchHHHHhcceEEEEeCCCc-hhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcC
Q 014830 226 GYGLGSELRRAGVFVKTVRDKP-QAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGD 297 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKP-qAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd 297 (417)
|..+|..|-++|..|-.+...+ +.++ ++...+ -..|..+.++..|=+|...+-+.+.+. ++..+|--.
T Consensus 17 G~~ia~~l~~~G~~V~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~lv~nA 90 (246)
T 3osu_A 17 GRSIALQLAEEGYNVAVNYAGSKEKAE-AVVEEI---KAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLDVLVNNA 90 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHH---HHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHH---HhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5678899999999997654433 3332 233333 235777888888888877766655543 666666444
No 475
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=30.76 E-value=3.2e+02 Score=25.21 Aligned_cols=67 Identities=10% Similarity=0.121 Sum_probs=44.0
Q ss_pred CCchHHHHhcceEEEEeCC-----CchhHHHHHHHHHHHhhhCCcceEEEEeC-CcchHHHHHHHHHcCCcEEEEcC
Q 014830 227 YGLGSELRRAGVFVKTVRD-----KPQAADWALKRQMQHSMSSGVDWMFLVSD-DNDFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~d-----KPqAAD~ALkrhm~~~m~rgv~cLvLVSD-DsdF~~~Lr~AR~~~v~TVVVGd 297 (417)
-...+-.++.|+.+..+.. .|.|++. .+=+..+-..+|.||+.=+- ++..+.. .|++.|++++++..
T Consensus 187 ~af~Yf~~~yGl~~~~~~~~~~~~eps~~~l--~~l~~~ik~~~v~~if~e~~~~~~~~~~--la~~~g~~v~~l~p 259 (286)
T 3gi1_A 187 TAFSYLAKRFGLKQLGISGISPEQEPSPRQL--KEIQDFVKEYNVKTIFAEDNVNPKIAHA--IAKSTGAKVKTLSP 259 (286)
T ss_dssp SCCHHHHHHTTCEEEEEECSCC---CCHHHH--HHHHHHHHHTTCCEEEECTTSCTHHHHH--HHHTTTCEEEECCC
T ss_pred CchHHHHHHCCCeEeeccccCCCCCCCHHHH--HHHHHHHHHcCCCEEEEeCCCChHHHHH--HHHHhCCeEEEecc
Confidence 4566778899999887644 4667743 33333345689999877544 3345554 48999998777643
No 476
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=30.57 E-value=1.1e+02 Score=26.68 Aligned_cols=49 Identities=4% Similarity=-0.088 Sum_probs=32.3
Q ss_pred hhHHHHHHHHHHHhhhCCcceEEEEeCCc---------------chHHHHHHHHHcCCcEEEEcC
Q 014830 248 QAADWALKRQMQHSMSSGVDWMFLVSDDN---------------DFKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 248 qAAD~ALkrhm~~~m~rgv~cLvLVSDDs---------------dF~~~Lr~AR~~~v~TVVVGd 297 (417)
+++-..+++.++-+-..|+..|++.+... .+..+...|++.||+ +.+=.
T Consensus 80 ~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~-l~lE~ 143 (286)
T 3dx5_A 80 EKTIEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMY-VLLET 143 (286)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCE-EEEEC
T ss_pred HHHHHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCE-EEEec
Confidence 34444566777777789999998876542 245567778888974 44434
No 477
>1h0h_A Formate dehydrogenase (large subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: b.52.2.2 c.81.1.1
Probab=30.35 E-value=57 Score=35.36 Aligned_cols=48 Identities=15% Similarity=0.237 Sum_probs=36.5
Q ss_pred CCcceEEEEeCCc-----chHHHHHHHHHcCCcEEEEcCCCCccccccccccc
Q 014830 264 SGVDWMFLVSDDN-----DFKEMLRKARDANLGTVVVGDSNRGLGQHADLWVP 311 (417)
Q Consensus 264 rgv~cLvLVSDDs-----dF~~~Lr~AR~~~v~TVVVGd~~~~L~R~ADl~fS 311 (417)
...++||++--+. .....++.||++|.+.|||.-........||+|++
T Consensus 183 ~~ad~il~~G~N~~~~~p~~~~~~~~a~~~G~klivIDPr~t~ta~~AD~~l~ 235 (977)
T 1h0h_A 183 KNSDVILMMGSNPAENHPISFKWVMRAKDKGATLIHVDPRYTRTSTKCDLYAP 235 (977)
T ss_dssp GGCSEEEEESCCHHHHSTTHHHHHHHHHHTTCEEEEECSSCCTTGGGCSEEEC
T ss_pred hhCCEEEEECCChHHhCcHHHHHHHHHHHCCCeEEEECCCCCchhHHhCeeec
Confidence 3478888886552 23345778899999999998876678889999975
No 478
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix bundle, rubre like, electron transport; 1.63A {Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB: 1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A 1ryt_A
Probab=30.33 E-value=14 Score=32.88 Aligned_cols=27 Identities=15% Similarity=0.240 Sum_probs=17.6
Q ss_pred hhcchhhccCccCC--CCCeecccCCCCC
Q 014830 140 KQFDILERRGVAVP--NDPYICGVCGRKC 166 (417)
Q Consensus 140 k~ld~lE~~G~v~p--~~PY~C~VCGRkf 166 (417)
+.|+.++....... ..-|+|++||.-+
T Consensus 137 ~~l~~l~~~~~~~~~~~~~~~C~~CG~~~ 165 (191)
T 1lko_A 137 DFARNIKEGRVFLREQATKWRCRNCGYVH 165 (191)
T ss_dssp HHHHHHHHTCSSEEEEEEEEEETTTCCEE
T ss_pred HHHHhhhcccccccCCCceEEECCCCCEe
Confidence 56777776554432 2368999999853
No 479
>4dcc_A Putative haloacid dehalogenase-like hydrolase; magnesium binding site, enzyme function initiativ; 1.65A {Bacteroides thetaiotaomicron} PDB: 4dfd_A 4f71_A 4f72_A
Probab=30.30 E-value=74 Score=26.39 Aligned_cols=50 Identities=12% Similarity=0.219 Sum_probs=31.7
Q ss_pred CCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 244 RDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 244 ~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
..||.+. .-.++...++...+-++.|-|.. .+ +..|+.+|+++|.|....
T Consensus 171 ~~KP~~~---~~~~~~~~~g~~~~~~~~vGD~~--~D-i~~a~~aG~~~i~v~~~~ 220 (229)
T 4dcc_A 171 MAKPEPE---IFKAVTEDAGIDPKETFFIDDSE--IN-CKVAQELGISTYTPKAGE 220 (229)
T ss_dssp CCTTCHH---HHHHHHHHHTCCGGGEEEECSCH--HH-HHHHHHTTCEEECCCTTC
T ss_pred CCCCCHH---HHHHHHHHcCCCHHHeEEECCCH--HH-HHHHHHcCCEEEEECCHH
Confidence 3577644 33333333455556666665554 55 788999999999887754
No 480
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=30.15 E-value=38 Score=28.41 Aligned_cols=73 Identities=16% Similarity=0.199 Sum_probs=45.1
Q ss_pred CCCchHHHHhcceEEEEeCCCchhH-----------HHHH-HHHHHHhhhCCcceEEEEeCCcc----------hHHHHH
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAA-----------DWAL-KRQMQHSMSSGVDWMFLVSDDND----------FKEMLR 283 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAA-----------D~AL-krhm~~~m~rgv~cLvLVSDDsd----------F~~~Lr 283 (417)
|..|+.+|.+.|..|..+...+... |..= ...+...+ .+++.||....... -..+++
T Consensus 13 G~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~~d~vi~~ag~~~~~~~~~n~~~~~~l~~ 91 (219)
T 3dqp_A 13 GKSLLKSLSTTDYQIYAGARKVEQVPQYNNVKAVHFDVDWTPEEMAKQL-HGMDAIINVSGSGGKSLLKVDLYGAVKLMQ 91 (219)
T ss_dssp HHHHHHHHTTSSCEEEEEESSGGGSCCCTTEEEEECCTTSCHHHHHTTT-TTCSEEEECCCCTTSSCCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEECCccchhhcCCceEEEecccCCHHHHHHHH-cCCCEEEECCcCCCCCcEeEeHHHHHHHHH
Confidence 4567788888888888665554321 2111 22233333 47998887665432 356889
Q ss_pred HHHHcCCcEEEEcCCC
Q 014830 284 KARDANLGTVVVGDSN 299 (417)
Q Consensus 284 ~AR~~~v~TVVVGd~~ 299 (417)
.|++.+++.+|.-.+.
T Consensus 92 a~~~~~~~~iv~~SS~ 107 (219)
T 3dqp_A 92 AAEKAEVKRFILLSTI 107 (219)
T ss_dssp HHHHTTCCEEEEECCT
T ss_pred HHHHhCCCEEEEECcc
Confidence 9999999877654433
No 481
>2h54_A Caspase-1; allosteric site, dimer interface, hydrolase; HET: PHQ; 1.80A {Homo sapiens} PDB: 1rwm_A* 1rwk_A* 1rwo_A* 1rwp_A* 1rwv_A* 1rww_A* 1rwn_A* 2h48_A* 2h4w_A* 1rwx_A* 2hbq_A* 2hby_A* 1ibc_A 3d6m_A* 2h4y_A* 2h51_A* 3d6f_A* 3d6h_A* 2hbz_A* 2hbr_A* ...
Probab=29.95 E-value=57 Score=28.93 Aligned_cols=75 Identities=16% Similarity=0.277 Sum_probs=48.0
Q ss_pred HHHhhhhccccchhHHHHHHhhccchHHHHHHHhhcCCCCC-----CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHH
Q 014830 186 KKLNRMKSLKGKKRQKYKERYISGNDKYNEAARSLLKPKVG-----YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQH 260 (417)
Q Consensus 186 KRLnrL~S~KGkrR~rl~~~~a~k~~KY~~AArevL~PKvG-----YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~ 260 (417)
.....|++-...+| -.++-.+.+|. -+.+..| -.|+..|++.||.|.+..|..... +++.|..
T Consensus 31 ~~~Y~m~~~~~~~g----~ALIInn~~f~-----~~~~R~G~~~Da~~L~~~f~~LgF~V~~~~dlt~~e---m~~~l~~ 98 (178)
T 2h54_A 31 AEIYPIMDKSSRTR----LALIICNEEFD-----SIPRRTGAEVDITGMTMLLQNLGYSVDVKKNLTASD---MTTELEA 98 (178)
T ss_dssp CSBCCCCCTTTCCC----EEEEEECCCCS-----SSCCCTTHHHHHHHHHHHHHHTTCEEEEEESCCHHH---HHHHHHH
T ss_pred ccccCCCCCCCcCC----EEEEEehhhcC-----CCccCCCCHHHHHHHHHHHHHCCCEEEEecCCCHHH---HHHHHHH
Confidence 34455655332222 24556777774 3556556 789999999999999998876655 6666665
Q ss_pred hhh----CCcceEEEE
Q 014830 261 SMS----SGVDWMFLV 272 (417)
Q Consensus 261 ~m~----rgv~cLvLV 272 (417)
... ...+|+|+|
T Consensus 99 f~~~~d~~~~d~~v~~ 114 (178)
T 2h54_A 99 FAHRPEHKTSDSTFLV 114 (178)
T ss_dssp HHTCGGGGGCSCEEEE
T ss_pred HHhhhhcCCCCEEEEE
Confidence 443 356776554
No 482
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=29.74 E-value=1.5e+02 Score=26.78 Aligned_cols=33 Identities=9% Similarity=-0.135 Sum_probs=24.0
Q ss_pred CCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 264 SGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 264 rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
.+.|+| |+|...|...+ .|+..|+..|.+.-+.
T Consensus 113 ~~PD~V--v~~~~~~~~~~-aa~~~giP~v~~~~~~ 145 (391)
T 3tsa_A 113 WRPSVL--LVDVCALIGRV-LGGLLDLPVVLHRWGV 145 (391)
T ss_dssp HCCSEE--EEETTCHHHHH-HHHHTTCCEEEECCSC
T ss_pred cCCCEE--EeCcchhHHHH-HHHHhCCCEEEEecCC
Confidence 468854 44667777665 8899999999987543
No 483
>3u26_A PF00702 domain protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, unknown function; 1.59A {Pyrococcus horikoshii} SCOP: c.108.1.1 PDB: 1x42_A
Probab=29.60 E-value=1.2e+02 Score=24.50 Aligned_cols=22 Identities=23% Similarity=0.318 Sum_probs=13.4
Q ss_pred HHHHHHHcCC---cEEEEcCCC-Ccc
Q 014830 281 MLRKARDANL---GTVVVGDSN-RGL 302 (417)
Q Consensus 281 ~Lr~AR~~~v---~TVVVGd~~-~~L 302 (417)
+.+.+++.|+ .+++|||+. .++
T Consensus 161 ~~~~~~~~~~~~~~~~~vGD~~~~Di 186 (234)
T 3u26_A 161 FELALKKAGVKGEEAVYVGDNPVKDC 186 (234)
T ss_dssp HHHHHHHHTCCGGGEEEEESCTTTTH
T ss_pred HHHHHHHcCCCchhEEEEcCCcHHHH
Confidence 4455556665 367777774 555
No 484
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=29.42 E-value=37 Score=31.80 Aligned_cols=63 Identities=19% Similarity=0.133 Sum_probs=39.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|+..++++.|+.+.......+. ..+..+.+++++-||+...+ .++++.+++.|+..|+|+..
T Consensus 44 ~gi~~~a~~~g~~~~i~~~~~~~------~~i~~l~~~~vDGiIi~~~~---~~~~~~l~~~~iPvV~i~~~ 106 (412)
T 4fe7_A 44 EGVGEYLQASQSEWDIFIEEDFR------ARIDKIKDWLGDGVIADFDD---KQIEQALADVDVPIVGVGGS 106 (412)
T ss_dssp HHHHHHHHHHTCCEEEEECC-CC--------------CCCSEEEEETTC---HHHHHHHTTCCSCEEEEEEC
T ss_pred HHHHHHHHhcCCCeEEEecCCcc------chhhhHhcCCCCEEEEecCC---hHHHHHHhhCCCCEEEecCC
Confidence 36677788888877765432221 12455678999999985443 45678888999999999864
No 485
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=29.31 E-value=23 Score=30.97 Aligned_cols=35 Identities=9% Similarity=0.263 Sum_probs=26.2
Q ss_pred CCcceEEEEeCCc--------chHHHHHHHHHcCCcEEEEcCC
Q 014830 264 SGVDWMFLVSDDN--------DFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 264 rgv~cLvLVSDDs--------dF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
.|++.||...... ....+++.|++.|++.+|.-.+
T Consensus 64 ~~~d~vi~~a~~~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 64 KGMDTVVFIPSIIHPSFKRIPEVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp TTCSEEEECCCCCCSHHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred hCCCEEEEeCCCCccchhhHHHHHHHHHHHHHcCCCEEEEEcc
Confidence 4899999887653 2357899999999987765443
No 486
>3qnm_A Haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 1.70A {Bacteroides thetaiotaomicron} SCOP: c.108.1.0
Probab=29.18 E-value=1.3e+02 Score=24.38 Aligned_cols=71 Identities=8% Similarity=0.047 Sum_probs=39.5
Q ss_pred CCchHHHHhcceEEEEeCCCchhH-HHHHHHHHHHhhhCCcceEEEEeCCc-----chHHHHHHHHHcCC---cEEEEcC
Q 014830 227 YGLGSELRRAGVFVKTVRDKPQAA-DWALKRQMQHSMSSGVDWMFLVSDDN-----DFKEMLRKARDANL---GTVVVGD 297 (417)
Q Consensus 227 YGLA~ELkRAGV~VrtV~dKPqAA-D~ALkrhm~~~m~rgv~cLvLVSDDs-----dF~~~Lr~AR~~~v---~TVVVGd 297 (417)
..+-..|+ .|+.+-.+++.+... ...|+.. -+..-.+ .++.|++. +=..+...+++.|+ .+++|||
T Consensus 113 ~~~l~~l~-~g~~~~i~sn~~~~~~~~~l~~~---~l~~~f~-~~~~~~~~~~~kp~~~~~~~~~~~lgi~~~~~~~iGD 187 (240)
T 3qnm_A 113 KEVLEYLA-PQYNLYILSNGFRELQSRKMRSA---GVDRYFK-KIILSEDLGVLKPRPEIFHFALSATQSELRESLMIGD 187 (240)
T ss_dssp HHHHHHHT-TTSEEEEEECSCHHHHHHHHHHH---TCGGGCS-EEEEGGGTTCCTTSHHHHHHHHHHTTCCGGGEEEEES
T ss_pred HHHHHHHH-cCCeEEEEeCCchHHHHHHHHHc---ChHhhce-eEEEeccCCCCCCCHHHHHHHHHHcCCCcccEEEECC
Confidence 34455677 898888888876533 2222221 0111122 34445442 23445666777777 5799999
Q ss_pred CC-Ccc
Q 014830 298 SN-RGL 302 (417)
Q Consensus 298 ~~-~~L 302 (417)
+. .++
T Consensus 188 ~~~~Di 193 (240)
T 3qnm_A 188 SWEADI 193 (240)
T ss_dssp CTTTTH
T ss_pred CchHhH
Confidence 83 655
No 487
>3d6j_A Putative haloacid dehalogenase-like hydrolase; structural genomics, PSI-2, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=29.17 E-value=55 Score=26.15 Aligned_cols=19 Identities=16% Similarity=0.336 Sum_probs=12.2
Q ss_pred hHHHHhcceEEEEeCCCch
Q 014830 230 GSELRRAGVFVKTVRDKPQ 248 (417)
Q Consensus 230 A~ELkRAGV~VrtV~dKPq 248 (417)
-..|+..|+.+-.+++.+.
T Consensus 98 l~~l~~~g~~~~i~s~~~~ 116 (225)
T 3d6j_A 98 LTHLKKQGIRIGIISTKYR 116 (225)
T ss_dssp HHHHHHHTCEEEEECSSCH
T ss_pred HHHHHHCCCeEEEEECCCH
Confidence 3456667777777776654
No 488
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=29.08 E-value=20 Score=34.64 Aligned_cols=75 Identities=16% Similarity=0.280 Sum_probs=49.5
Q ss_pred eEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcE-EEEcCCCCccccccccccchhhhh
Q 014830 238 VFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGT-VVVGDSNRGLGQHADLWVPWIEVE 316 (417)
Q Consensus 238 V~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~T-VVVGd~~~~L~R~ADl~fSW~eV~ 316 (417)
+.|-.++-.+.+.+.|++- ...+-..|+.+-+....+..+..-++.|.+.|+.- ||||+ +|++
T Consensus 367 ~~v~v~~~~~~~~~~a~~l-~~~Lr~~Gi~ve~~~~~~~~l~~q~k~A~~~g~~~~viiG~---------------~E~~ 430 (464)
T 4g84_A 367 TQVLVASAQKKLLEERLKL-VSELWDAGIKAELLYKKNPKLLNQLQYCEEAGIPLVAIIGE---------------QELK 430 (464)
T ss_dssp CCEEEECSSSSCHHHHHHH-HHHHHHTTCCEECCSCSSCCHHHHHHHHHHHTCCEEEECCH---------------HHHH
T ss_pred ceEEEEeCCHHHHHHHHHH-HHHHHHCCCcEEEEeCCCCCHHHHHHHHHHCCCCEEEEECc---------------hhhh
Confidence 3455555455555555432 22334588887665555567999999999999986 56676 6789
Q ss_pred cCcccccccccC
Q 014830 317 NGELTERDLVPR 328 (417)
Q Consensus 317 ~Gk~~~~~~~~~ 328 (417)
+|.++-+++..+
T Consensus 431 ~g~v~vK~l~tg 442 (464)
T 4g84_A 431 DGVIKLRSVTSR 442 (464)
T ss_dssp HTEEEEEETTTC
T ss_pred CCEEEEEECCCC
Confidence 999887666443
No 489
>3ctp_A Periplasmic binding protein/LACI transcriptional; structural genomics, protein structure initiative; HET: XLF; 1.41A {Alkaliphilus metalliredigens}
Probab=29.00 E-value=68 Score=28.61 Aligned_cols=64 Identities=9% Similarity=0.021 Sum_probs=39.8
Q ss_pred CchHHHHhcceEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCC
Q 014830 228 GLGSELRRAGVFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDS 298 (417)
Q Consensus 228 GLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~ 298 (417)
|+..++++.|+.+.......+.. .....+..+..++++-|| .+-+.+. ..+.+.++..|+++..
T Consensus 81 gi~~~~~~~g~~~~~~~~~~~~~--~~~~~~~~l~~~~vdgiI-~~~~~~~----~~l~~~~iPvV~~~~~ 144 (330)
T 3ctp_A 81 VIEEYAKNKGYTLFLCNTDDDKE--KEKTYLEVLQSHRVAGII-ASRSQCE----DEYANIDIPVVAFENH 144 (330)
T ss_dssp HHHHHHHHTTCEEEEEECTTCHH--HHHHHHHHHHHTTCSEEE-EETCCCS----GGGTTCCSCEEEESSC
T ss_pred HHHHHHHHCCCEEEEEeCCCChH--HHHHHHHHHHhCCCCEEE-ECCCCCH----HHHHhcCCCEEEEecc
Confidence 56667777888877654332222 123344556678999999 7654432 2234678888998764
No 490
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=28.95 E-value=66 Score=27.29 Aligned_cols=74 Identities=14% Similarity=0.113 Sum_probs=46.2
Q ss_pred CCCchHHHHhcceEEEEeCCCchhHHHHHHHHH------------HHhhhCCcceEEEEeCCcc--------------hH
Q 014830 226 GYGLGSELRRAGVFVKTVRDKPQAADWALKRQM------------QHSMSSGVDWMFLVSDDND--------------FK 279 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~dKPqAAD~ALkrhm------------~~~m~rgv~cLvLVSDDsd--------------F~ 279 (417)
|.-|+.+|.+.|..|..+...+..++......+ ... -.++|.||....-.. ..
T Consensus 34 G~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~~~~~~~-~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~ 112 (236)
T 3e8x_A 34 ARYLLSELKNKGHEPVAMVRNEEQGPELRERGASDIVVANLEEDFSHA-FASIDAVVFAAGSGPHTGADKTILIDLWGAI 112 (236)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGHHHHHHTTCSEEEECCTTSCCGGG-GTTCSEEEECCCCCTTSCHHHHHHTTTHHHH
T ss_pred HHHHHHHHHhCCCeEEEEECChHHHHHHHhCCCceEEEcccHHHHHHH-HcCCCEEEECCCCCCCCCccccchhhHHHHH
Confidence 567888888889988877666654433221111 111 247888877654331 24
Q ss_pred HHHHHHHHcCCcEEEEcCCCC
Q 014830 280 EMLRKARDANLGTVVVGDSNR 300 (417)
Q Consensus 280 ~~Lr~AR~~~v~TVVVGd~~~ 300 (417)
.+++.|++++++.+|.=.+.+
T Consensus 113 ~l~~a~~~~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 113 KTIQEAEKRGIKRFIMVSSVG 133 (236)
T ss_dssp HHHHHHHHHTCCEEEEECCTT
T ss_pred HHHHHHHHcCCCEEEEEecCC
Confidence 578899999998877644443
No 491
>3k1z_A Haloacid dehalogenase-like hydrolase domain-conta protein 3; HDHD3, haloacid dehalogenase-like hydrolase domain containin structural genomics; 1.55A {Homo sapiens}
Probab=28.81 E-value=1.4e+02 Score=25.53 Aligned_cols=22 Identities=14% Similarity=0.116 Sum_probs=14.5
Q ss_pred chHHHHhcceEEEEeCCCchhH
Q 014830 229 LGSELRRAGVFVKTVRDKPQAA 250 (417)
Q Consensus 229 LA~ELkRAGV~VrtV~dKPqAA 250 (417)
+-..|++.|+.+-.+++.+...
T Consensus 114 ~l~~l~~~g~~~~i~tn~~~~~ 135 (263)
T 3k1z_A 114 TLRECRTRGLRLAVISNFDRRL 135 (263)
T ss_dssp HHHHHHHTTCEEEEEESCCTTH
T ss_pred HHHHHHhCCCcEEEEeCCcHHH
Confidence 3456677777777777766644
No 492
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=28.78 E-value=1.5e+02 Score=28.43 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=48.6
Q ss_pred CchHHHHhcc--eEEEEeCCCchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHH-HHHc-CCcEEEEcCCCCccc
Q 014830 228 GLGSELRRAG--VFVKTVRDKPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRK-ARDA-NLGTVVVGDSNRGLG 303 (417)
Q Consensus 228 GLA~ELkRAG--V~VrtV~dKPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~-AR~~-~v~TVVVGd~~~~L~ 303 (417)
|+....+.-| +.+..+...+..+|. .+.|..++..|++-|+++| ..|.+.+.. |.+. +++-|++.. .-...
T Consensus 49 G~~~~~~~~G~~~~~~~~e~~~~~~d~--~~~l~~l~~~g~d~Ii~~g--~~~~~~~~~vA~~~Pdv~fv~id~-~~~~~ 123 (356)
T 3s99_A 49 ARKELVEALGDKVETTFLENVAEGADA--ERSIKRIARAGNKLIFTTS--FGYMDPTVKVAKKFPDVKFEHATG-YKTAD 123 (356)
T ss_dssp HHHHHHHHHTTTEEEEEECSCCTTHHH--HHHHHHHHHTTCSEEEECS--GGGHHHHHHHHTTCTTSEEEEESC-CCCBT
T ss_pred HHHHHHHHhCCceEEEEEecCCCHHHH--HHHHHHHHHCCCCEEEECC--HHHHHHHHHHHHHCCCCEEEEEec-cccCC
Confidence 3344455567 888888887776654 5678888899999666664 456665544 4553 566666643 21223
Q ss_pred cccccccch
Q 014830 304 QHADLWVPW 312 (417)
Q Consensus 304 R~ADl~fSW 312 (417)
..+-+.|..
T Consensus 124 Nv~sv~~~~ 132 (356)
T 3s99_A 124 NMSAYNARF 132 (356)
T ss_dssp TEEEEEECH
T ss_pred cEEEEEech
Confidence 344444443
No 493
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=28.76 E-value=81 Score=27.95 Aligned_cols=34 Identities=12% Similarity=0.166 Sum_probs=29.6
Q ss_pred CCcceEEEEeCCcc---hHHHHHHHHHcCCcEEEEcC
Q 014830 264 SGVDWMFLVSDDND---FKEMLRKARDANLGTVVVGD 297 (417)
Q Consensus 264 rgv~cLvLVSDDsd---F~~~Lr~AR~~~v~TVVVGd 297 (417)
.--|+++++|-+.+ =.++...|+++|+.+|.|..
T Consensus 76 ~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vIaITs 112 (170)
T 3jx9_A 76 HAVDRVLIFTPDTERSDLLASLARYDAWHTPYSIITL 112 (170)
T ss_dssp CTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEEEEES
T ss_pred CCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 55799999997766 67888899999999999999
No 494
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=28.60 E-value=31 Score=28.85 Aligned_cols=31 Identities=13% Similarity=0.057 Sum_probs=17.8
Q ss_pred CcceEEEEeCCcchHHHHHHHHHcCCcEEEE
Q 014830 265 GVDWMFLVSDDNDFKEMLRKARDANLGTVVV 295 (417)
Q Consensus 265 gv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVV 295 (417)
.+|.+++.--+..-.++++.+-++|++.|++
T Consensus 70 ~~Dlvii~vp~~~v~~v~~~~~~~g~~~i~i 100 (145)
T 2duw_A 70 KVDMVDVFRNSEAAWGVAQEAIAIGAKTLWL 100 (145)
T ss_dssp CCSEEECCSCSTHHHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEEEeCHHHHHHHHHHHHHcCCCEEEE
Confidence 4555555444555556666565666666555
No 495
>1s24_A Rubredoxin 2; electron transport; NMR {Pseudomonas oleovorans} SCOP: g.41.5.1
Probab=28.58 E-value=18 Score=29.77 Aligned_cols=21 Identities=5% Similarity=0.022 Sum_probs=0.0
Q ss_pred eecccccCccccCchHHHHHH
Q 014830 116 ISAYANRHAFIHLPQWVIQER 136 (417)
Q Consensus 116 isAYANRhAFs~vP~~vre~R 136 (417)
+.++.++|.|.+-|.......
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~ 29 (87)
T 1s24_A 9 SADVKGQDLYKTQPPRSDAQG 29 (87)
T ss_dssp ---------------------
T ss_pred hhhhccccccccCCccccccc
Confidence 456777788887777665443
No 496
>2xw6_A MGS, methylglyoxal synthase; lyase; 1.08A {Thermus SP} PDB: 2x8w_A 1wo8_A
Probab=28.54 E-value=90 Score=26.95 Aligned_cols=61 Identities=18% Similarity=0.314 Sum_probs=47.2
Q ss_pred CchHHHHh-cceEEEEeCCCchhHHHHHHHHHHHhhh-CCcceEEEEeC-------CcchHHHHHHHHHcCCcE
Q 014830 228 GLGSELRR-AGVFVKTVRDKPQAADWALKRQMQHSMS-SGVDWMFLVSD-------DNDFKEMLRKARDANLGT 292 (417)
Q Consensus 228 GLA~ELkR-AGV~VrtV~dKPqAAD~ALkrhm~~~m~-rgv~cLvLVSD-------DsdF~~~Lr~AR~~~v~T 292 (417)
|=+..|++ +|+.|+.|...|.--| -||.+++. ..|+.+|-..| +.|=..+.|.|-+.++-.
T Consensus 39 gTa~~L~e~~Gl~v~~v~k~~~eG~----p~I~d~I~~geIdlVInt~~pl~~~~h~~D~~~IrR~A~~~~IP~ 108 (134)
T 2xw6_A 39 TTGRRIEEATGLTVEKLLSGPLGGD----QQMGARVAEGRILAVIFFRDPLTAQPHEPDVQALLRVCDVHGVPL 108 (134)
T ss_dssp HHHHHHHHHHCCCCEECSCGGGTHH----HHHHHHHHTTCEEEEEEECCTTTCCTTSCCSHHHHHHHHHHTCCE
T ss_pred HHHHHHHHhhCceEEEEEecCCCCc----chHHHHHHCCCccEEEEccCcccCCCccchHHHHHHHHHHcCCCe
Confidence 45788999 9999999976673333 26666665 56999988888 678889999999998654
No 497
>2jz8_A Uncharacterized protein BH09830; zinc binding, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Bartonella henselae str}
Probab=28.53 E-value=12 Score=31.00 Aligned_cols=19 Identities=26% Similarity=0.522 Sum_probs=14.6
Q ss_pred CCCeecccCCCCCCChHHH
Q 014830 154 NDPYICGVCGRKCKTNLDL 172 (417)
Q Consensus 154 ~~PY~C~VCGRkf~T~~kL 172 (417)
+....|++||.+|.-...+
T Consensus 46 ~g~~~CpYCg~~y~~~~~~ 64 (87)
T 2jz8_A 46 TDEKICPYCSTLYRYDPSL 64 (87)
T ss_dssp CCEECCTTTCCEEECCTTS
T ss_pred CCeEECCCCCCEeEcCCCC
Confidence 4678999999998765543
No 498
>2b0c_A Putative phosphatase; alpha-D-glucose-1-phosphate, structural genomic protein structure initiative, midwest center for structural genomics, MCSG; HET: G1P; 2.00A {Escherichia coli} SCOP: c.108.1.2
Probab=28.51 E-value=93 Score=24.90 Aligned_cols=35 Identities=14% Similarity=0.234 Sum_probs=23.4
Q ss_pred hhCCcceEEEEeCCcchHHHHHHHHHcCCcEEEEcCCC
Q 014830 262 MSSGVDWMFLVSDDNDFKEMLRKARDANLGTVVVGDSN 299 (417)
Q Consensus 262 m~rgv~cLvLVSDDsdF~~~Lr~AR~~~v~TVVVGd~~ 299 (417)
++...+-++.|.|+.. + +..|+..|+++|.|..+.
T Consensus 161 ~~~~~~~~~~vgD~~~--D-i~~a~~aG~~~~~~~~~~ 195 (206)
T 2b0c_A 161 EGFSPSDTVFFDDNAD--N-IEGANQLGITSILVKDKT 195 (206)
T ss_dssp HTCCGGGEEEEESCHH--H-HHHHHTTTCEEEECCSTT
T ss_pred cCCCHHHeEEeCCCHH--H-HHHHHHcCCeEEEecCCc
Confidence 3444555666666543 5 788899999888876643
No 499
>3e58_A Putative beta-phosphoglucomutase; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics; 1.86A {Streptococcus thermophilus lmg 18311}
Probab=28.33 E-value=2e+02 Score=22.60 Aligned_cols=16 Identities=13% Similarity=0.208 Sum_probs=8.7
Q ss_pred HHHHHHcCCcEEEEcC
Q 014830 282 LRKARDANLGTVVVGD 297 (417)
Q Consensus 282 Lr~AR~~~v~TVVVGd 297 (417)
+..|+..|+++|.|..
T Consensus 175 i~~a~~aG~~~~~~~~ 190 (214)
T 3e58_A 175 IAAGVAADVEVWAIRD 190 (214)
T ss_dssp HHHHHHTTCEEEEECC
T ss_pred HHHHHHCCCEEEEECC
Confidence 3455555555555554
No 500
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=28.29 E-value=86 Score=26.91 Aligned_cols=68 Identities=12% Similarity=0.141 Sum_probs=43.0
Q ss_pred CCCchHHHHhcceEEEEeCC-CchhHHHHHHHHHHHhhhCCcceEEEEeCCcchHHHHHHHHHc-----CCcEEEEcC
Q 014830 226 GYGLGSELRRAGVFVKTVRD-KPQAADWALKRQMQHSMSSGVDWMFLVSDDNDFKEMLRKARDA-----NLGTVVVGD 297 (417)
Q Consensus 226 GYGLA~ELkRAGV~VrtV~d-KPqAAD~ALkrhm~~~m~rgv~cLvLVSDDsdF~~~Lr~AR~~-----~v~TVVVGd 297 (417)
|..++.+|.+.|..|..+.. .+...+ .+...+ ...+....++..|=++...+-+.+.+. ++..||--.
T Consensus 20 G~~~a~~l~~~G~~V~~~~r~~~~~~~-~~~~~l---~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~~A 93 (261)
T 1gee_A 20 GKSMAIRFATEKAKVVVNYRSKEDEAN-SVLEEI---KKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHH-HHHHHH---HHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEcCCChHHHH-HHHHHH---HhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 57788999999999987754 443332 233333 234566677778877777665555433 676666544
Done!